Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D76V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D26V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D56V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D46V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D39V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D75V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D35V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D45V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D1V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D36V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D38V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D42V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D63V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D67V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D10V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D5V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D61V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D67V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D48V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D26V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D55V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D2V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D46V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D68V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D12V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D75V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D54V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D3V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D70V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D66V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D52V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D51V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D16V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D15V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D38V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D7V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D49V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D25V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D11V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D22V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D26V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D42V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D35V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D48V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D63V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D25V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D3V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D54V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D15V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D36V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D10V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D76V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D56V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D55V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D39V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D49V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D7V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D45V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D52V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D46V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D22V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D2V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D67V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D26V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D75V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D68V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D16V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D12V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D38V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D67V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D75V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D46V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D66V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D38V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D5V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D61V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D51V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D70V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D1V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events_Preprocess:EventFile2Transform	broad_values_by_arm.txt	gdac.broadinstitute.org_UCS-TP.CopyNumber_Gistic2.Level_4.2014071500.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D2V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D52V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D51V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D16V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D13V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D15V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D38V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D7V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D49V3.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D25V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D11V2.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D22V1.pdf	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	pdf	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D26V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D35V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D25V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D3V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D54V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D15V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D36V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D5V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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GDAC_Correlate_Genomic_Events:clinical.info.file	UCS-TP.merged_data.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10478:22	Correlate_Clinical_vs_CopyNumber_Arm_2014071500	D58V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_UCS-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2014071500.0.0	yes
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