Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBER.OF.LYMPH.NODES RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 188 (19%) 807 0.39229 1 0.097669 1 0.85068 1 0.071869 1 0.30853 1 0.94095 1 1 1 0.01959 1 0.038835 1 0.10954 1 0.21458 1 0.51917 1 1q gain 649 (65%) 346 0.31428 1 0.4783 1 0.03236 1 0.00379 1 0.59589 1 0.63481 1 0.52817 1 0.0032 1 1 1 0.84724 1 0.079129 1 0.074577 1 2p gain 113 (11%) 882 0.27549 1 0.53634 1 0.7052 1 0.60406 1 0.99329 1 0.97364 1 0.6242 1 9.9999e-06 0.00959 0.37687 1 0.64509 1 0.00344 1 0.016064 1 2q gain 71 (7%) 924 0.85727 1 0.88202 1 0.88621 1 0.46294 1 0.88493 1 1 1 1 1 0.01124 1 0.78618 1 0.65308 1 0.050329 1 0.10218 1 3p gain 131 (13%) 864 0.33537 1 0.31256 1 0.086399 1 0.03962 1 0.43091 1 0.00071999 0.667 1 1 0.00125 1 0.53461 1 0.38043 1 0.45668 1 0.79463 1 3q gain 197 (20%) 798 0.57196 1 0.38495 1 0.72085 1 0.16256 1 0.53571 1 0.22741 1 0.7025 1 9.9999e-06 0.00959 0.21688 1 0.015832 1 0.02262 1 0.83038 1 4p gain 74 (7%) 921 0.10486 1 0.76536 1 0.17978 1 0.074539 1 0.69834 1 0.26234 1 0.57454 1 0.0058599 1 0.68802 1 0.66413 1 0.65612 1 0.73923 1 4q gain 70 (7%) 925 0.055374 1 0.88385 1 0.24183 1 0.19269 1 0.49857 1 0.27502 1 0.55365 1 0.00276 1 1 1 0.81295 1 0.47124 1 0.73094 1 5p gain 290 (29%) 705 0.076797 1 0.12281 1 0.38445 1 0.61345 1 0.00123 1 0.02193 1 0.31418 1 0.51421 1 0.39463 1 0.41427 1 0.37885 1 1 1 5q gain 194 (19%) 801 0.56084 1 0.0082263 1 0.47519 1 0.34973 1 0.17946 1 0.21057 1 1 1 0.75046 1 0.47851 1 0.95718 1 0.01489 1 1 1 6p gain 190 (19%) 805 0.3079 1 0.92747 1 0.75956 1 0.12795 1 0.45772 1 0.8642 1 0.70058 1 0.00021 0.196 0.15256 1 0.1716 1 0.057219 1 0.38158 1 6q gain 136 (14%) 859 0.26785 1 0.98934 1 0.57922 1 0.099229 1 0.095489 1 0.97677 1 1 1 0.00066999 0.622 0.35849 1 0.019994 1 0.26049 1 0.31353 1 7p gain 283 (28%) 712 0.53128 1 0.13972 1 0.90269 1 0.83205 1 0.92578 1 0.51052 1 0.015482 1 0.12415 1 0.24227 1 0.98943 1 0.55405 1 0.84965 1 7q gain 239 (24%) 756 0.72863 1 0.87146 1 0.59887 1 0.53599 1 0.58193 1 0.59529 1 0.30715 1 0.22292 1 0.93452 1 0.39285 1 0.24461 1 0.68937 1 8p gain 270 (27%) 725 0.78684 1 0.87841 1 0.56894 1 0.81359 1 0.72628 1 0.25213 1 0.50167 1 0.38445 1 0.9371 1 0.78973 1 0.16834 1 1 1 8q gain 494 (50%) 501 0.55029 1 0.75505 1 0.35915 1 0.70735 1 0.44684 1 0.089189 1 0.38194 1 9.9999e-06 0.00959 0.029101 1 0.53903 1 0.02628 1 0.17191 1 9p gain 128 (13%) 867 0.76748 1 0.95026 1 0.16677 1 0.47873 1 0.14637 1 0.79365 1 0.37658 1 0.55313 1 1 1 0.71437 1 0.62249 1 0.80278 1 9q gain 108 (11%) 887 0.1805 1 0.73043 1 0.51269 1 0.45992 1 0.20616 1 0.9719 1 0.61983 1 0.31922 1 0.57385 1 0.87351 1 0.36626 1 1 1 10p gain 200 (20%) 795 0.99148 1 0.49247 1 0.12768 1 0.27675 1 0.22473 1 0.10987 1 1 1 5.9999e-05 0.0565 0.053371 1 0.43661 1 0.00346 1 1 1 10q gain 117 (12%) 878 0.63812 1 0.41413 1 0.62258 1 0.32462 1 0.81851 1 0.56562 1 1 1 0.02167 1 0.063032 1 0.31921 1 0.10201 1 0.59244 1 11p gain 129 (13%) 866 0.46538 1 0.99149 1 0.93845 1 0.72934 1 0.23149 1 0.70596 1 0.6431 1 0.0052299 1 0.91691 1 0.048203 1 0.7093 1 0.45543 1 11q gain 89 (9%) 906 0.10292 1 0.97154 1 0.65358 1 0.71011 1 0.39329 1 0.75272 1 1 1 0.00123 1 0.62406 1 0.19186 1 0.20106 1 0.56202 1 12p gain 214 (22%) 781 0.25166 1 0.80468 1 0.6483 1 0.11962 1 0.1144 1 0.73648 1 0.065337 1 0.01718 1 0.23063 1 0.452 1 0.61977 1 0.4034 1 12q gain 181 (18%) 814 0.15524 1 0.30282 1 0.1369 1 0.04285 1 0.0063099 1 0.52325 1 0.033982 1 0.061789 1 0.17159 1 0.0068042 1 0.70986 1 0.37534 1 13q gain 86 (9%) 909 0.77653 1 0.42295 1 0.67408 1 0.42222 1 0.46853 1 0.29745 1 0.61275 1 0.004 1 0.38152 1 0.78913 1 0.41714 1 0.12062 1 14q gain 134 (13%) 861 0.43042 1 0.084486 1 0.19564 1 0.16435 1 0.057049 1 0.67644 1 0.37723 1 0.14205 1 0.53742 1 0.033888 1 0.71862 1 0.21209 1 15q gain 83 (8%) 912 0.37024 1 0.81165 1 0.69601 1 0.83526 1 0.93129 1 0.54798 1 1 1 0.00135 1 0.16386 1 0.99704 1 0.20417 1 1 1 16p gain 443 (45%) 552 0.89666 1 0.016255 1 0.61559 1 0.79986 1 0.40187 1 0.90897 1 0.55255 1 0.04192 1 0.4373 1 0.71557 1 0.16434 1 0.12553 1 16q gain 129 (13%) 866 0.070675 1 0.78253 1 0.20953 1 0.30143 1 0.18804 1 0.15827 1 0.042915 1 0.14283 1 1 1 0.27325 1 0.51044 1 0.21272 1 17p gain 101 (10%) 894 0.15651 1 0.91273 1 0.15521 1 0.02431 1 0.081359 1 0.47686 1 0.0027497 1 0.12286 1 0.061848 1 0.87922 1 0.65582 1 0.7773 1 17q gain 208 (21%) 787 0.049754 1 0.6634 1 0.80598 1 0.27159 1 0.67457 1 0.1805 1 0.0024324 1 0.065299 1 0.046371 1 0.2925 1 0.85591 1 0.67595 1 18p gain 163 (16%) 832 0.28658 1 0.29781 1 0.063589 1 0.3914 1 0.02492 1 0.60689 1 0.69851 1 0.00394 1 0.50593 1 0.016295 1 0.00043 0.401 0.10165 1 18q gain 138 (14%) 857 0.81305 1 0.69165 1 0.13893 1 0.24664 1 0.24944 1 0.068649 1 0.65626 1 0.04495 1 0.41778 1 0.28109 1 0.20734 1 0.21308 1 19p gain 170 (17%) 825 0.97107 1 0.72083 1 0.31089 1 0.19902 1 0.20477 1 0.16008 1 0.10169 1 0.19585 1 0.22429 1 0.017477 1 0.8654 1 1 1 19q gain 201 (20%) 794 0.5427 1 0.10521 1 0.2729 1 0.68005 1 0.10696 1 0.04351 1 0.24689 1 0.44244 1 0.38195 1 0.014 1 0.93522 1 0.83294 1 20p gain 383 (38%) 612 0.17241 1 0.28105 1 0.087109 1 0.60646 1 0.0085199 1 0.0059599 1 0.026871 1 9.9999e-06 0.00959 0.020619 1 0.47603 1 0.91364 1 0.38324 1 20q gain 417 (42%) 578 0.32017 1 0.79804 1 0.28735 1 0.056589 1 0.04952 1 0.04053 1 0.21759 1 9.9999e-06 0.00959 0.13443 1 0.25709 1 0.6146 1 0.17094 1 21q gain 187 (19%) 808 0.0037757 1 0.076728 1 0.76792 1 0.73836 1 0.8059 1 0.47629 1 1 1 3e-05 0.0283 0.058339 1 0.80108 1 0.02037 1 0.27432 1 22q gain 94 (9%) 901 0.12709 1 0.71385 1 0.30407 1 0.10104 1 0.38364 1 0.78593 1 1 1 0.00196 1 0.18769 1 0.14398 1 0.027 1 1 1 xq gain 130 (13%) 865 0.29987 1 0.09684 1 0.57295 1 0.43545 1 0.71625 1 0.13563 1 1 1 0.00018 0.169 0.06056 1 0.56925 1 0.24929 1 0.6086 1 1p loss 226 (23%) 769 0.030145 1 0.00058784 0.546 5.9999e-05 0.0565 3e-05 0.0283 0.0059599 1 0.43027 1 1 1 0.50344 1 0.67472 1 0.0010002 0.922 0.79886 1 0.67678 1 1q loss 50 (5%) 945 0.37791 1 0.27538 1 0.79494 1 0.31441 1 0.04243 1 0.333 1 1 1 0.19883 1 1 1 0.13981 1 0.45644 1 1 1 2p loss 168 (17%) 827 0.70335 1 0.32391 1 0.31841 1 0.47454 1 0.060359 1 0.093989 1 1 1 0.30899 1 0.024038 1 0.41922 1 0.43503 1 0.05314 1 2q loss 190 (19%) 805 0.26516 1 0.41287 1 0.14332 1 0.37315 1 0.069259 1 0.069579 1 1 1 0.1344 1 0.10754 1 0.16622 1 0.56372 1 0.043952 1 3p loss 170 (17%) 825 0.36217 1 0.073522 1 0.84309 1 0.00088999 0.821 0.8623 1 0.75575 1 0.22757 1 0.0053599 1 0.011572 1 0.82742 1 0.096699 1 0.046085 1 3q loss 93 (9%) 902 0.13748 1 0.3257 1 0.32587 1 0.00045 0.419 0.70692 1 0.6098 1 0.61253 1 0.069759 1 0.022006 1 0.83596 1 0.20001 1 0.041431 1 4p loss 324 (33%) 671 0.30232 1 0.29835 1 0.44993 1 0.03526 1 0.67531 1 0.4679 1 0.75525 1 9.9999e-06 0.00959 0.7642 1 0.81625 1 0.01873 1 0.58853 1 4q loss 288 (29%) 707 0.81919 1 0.87055 1 0.59809 1 0.071299 1 0.78389 1 0.38935 1 0.73863 1 9.9999e-06 0.00959 0.53499 1 0.9898 1 0.01711 1 0.70953 1 5p loss 130 (13%) 865 0.34784 1 0.0057928 1 0.92884 1 0.056519 1 0.94105 1 0.91004 1 1 1 9.9999e-06 0.00959 0.1443 1 0.55207 1 0.10363 1 0.46056 1 5q loss 212 (21%) 783 0.34785 1 0.00026127 0.244 0.27304 1 0.0055299 1 0.25339 1 0.55356 1 0.13365 1 9.9999e-06 0.00959 0.49343 1 0.067189 1 8.9999e-05 0.0845 0.30443 1 6p loss 170 (17%) 825 0.84252 1 0.059112 1 0.88778 1 0.43352 1 0.69698 1 0.04461 1 0.70091 1 0.57561 1 0.16081 1 0.99017 1 0.68937 1 0.49362 1 6q loss 250 (25%) 745 0.60373 1 0.0012901 1 0.66688 1 0.3089 1 0.40326 1 0.40439 1 0.30839 1 0.682 1 0.015107 1 0.30704 1 0.95892 1 0.55607 1 7p loss 104 (10%) 891 0.58064 1 0.57625 1 0.44767 1 0.45794 1 0.063399 1 0.14284 1 0.61697 1 0.00369 1 0.42222 1 0.2642 1 0.39626 1 0.16533 1 7q loss 113 (11%) 882 0.088368 1 0.16106 1 0.52356 1 0.44733 1 0.30614 1 0.13921 1 1 1 0.2198 1 0.37687 1 0.88689 1 0.8754 1 0.02556 1 8p loss 362 (36%) 633 0.028254 1 0.23756 1 0.95942 1 0.24913 1 0.68444 1 0.32908 1 0.75479 1 2e-05 0.0189 0.55867 1 0.38452 1 0.03508 1 0.48229 1 8q loss 81 (8%) 914 0.044041 1 0.22977 1 0.93385 1 0.49568 1 0.36008 1 0.49716 1 1 1 0.82296 1 0.15647 1 0.66372 1 0.0145 1 0.54313 1 9p loss 296 (30%) 699 0.022621 1 0.87221 1 0.00113 1 0.00014 0.131 0.03721 1 0.04595 1 0.094373 1 9.9999e-06 0.00959 0.090925 1 0.35448 1 0.20296 1 0.57475 1 9q loss 268 (27%) 727 0.27626 1 0.82897 1 0.1422 1 0.00311 1 0.13335 1 0.47748 1 0.078513 1 9.9999e-06 0.00959 0.057568 1 0.92878 1 0.0111 1 0.56234 1 10p loss 159 (16%) 836 0.021361 1 0.66056 1 0.0387 1 0.01107 1 0.12365 1 0.0086299 1 0.22887 1 0.094219 1 0.92355 1 0.18174 1 0.3953 1 0.3447 1 10q loss 213 (21%) 782 0.026527 1 0.9717 1 0.15065 1 0.01126 1 0.16831 1 0.01481 1 0.47342 1 0.0141 1 1 1 0.42043 1 0.061479 1 0.059736 1 11p loss 253 (25%) 742 0.25863 1 0.68891 1 0.14657 1 0.078099 1 0.03923 1 0.87151 1 0.73908 1 0.125 1 0.51825 1 0.15928 1 0.00242 1 0.072448 1 11q loss 338 (34%) 657 0.89295 1 0.81149 1 0.26524 1 0.23518 1 0.02283 1 0.48307 1 0.1988 1 0.41123 1 0.5527 1 0.26451 1 0.00313 1 0.85723 1 12p loss 139 (14%) 856 0.4622 1 0.33082 1 0.32554 1 0.02823 1 0.55325 1 0.14747 1 1 1 0.00201 1 0.36182 1 0.30352 1 0.31852 1 0.46277 1 12q loss 117 (12%) 878 0.69291 1 0.013881 1 0.26342 1 0.0187 1 0.57741 1 0.20966 1 0.62828 1 0.00087999 0.813 0.44457 1 0.070634 1 0.04014 1 0.6082 1 13q loss 408 (41%) 587 0.04618 1 0.36936 1 0.7664 1 0.071149 1 0.85462 1 0.9862 1 0.76684 1 0.00025 0.233 0.56733 1 0.69411 1 0.01224 1 0.30003 1 14q loss 240 (24%) 755 0.028591 1 0.61949 1 0.87494 1 0.03284 1 0.059549 1 0.93609 1 0.47631 1 4e-05 0.0377 0.25095 1 0.050521 1 0.00054999 0.511 0.32643 1 15q loss 296 (30%) 699 0.11261 1 0.65789 1 0.54113 1 0.01062 1 0.0462 1 0.47829 1 1 1 0.00018 0.169 0.090925 1 0.18475 1 0.18067 1 0.35643 1 16p loss 154 (15%) 841 0.68876 1 0.5568 1 0.2493 1 0.98223 1 0.098649 1 0.59213 1 0.68262 1 0.13178 1 0.3833 1 0.066027 1 0.0064599 1 0.81787 1 16q loss 546 (55%) 449 0.059224 1 0.00078441 0.726 0.32146 1 0.45098 1 0.065089 1 0.11344 1 0.23781 1 9.9999e-06 0.00959 0.056391 1 0.099685 1 0.70339 1 0.73416 1 17p loss 532 (53%) 463 0.3426 1 0.013948 1 0.10155 1 0.0060899 1 0.84433 1 0.80114 1 0.36361 1 0.0085599 1 0.88796 1 0.98572 1 0.12115 1 0.86604 1 17q loss 250 (25%) 745 0.95241 1 0.088083 1 0.89136 1 0.46087 1 0.29241 1 0.22048 1 0.075019 1 0.00084999 0.786 1 1 0.59406 1 0.00347 1 1 1 18p loss 293 (29%) 702 9.479e-07 0.00091 0.0047923 1 0.057249 1 0.01318 1 0.43622 1 0.93023 1 1 1 0.01039 1 0.87766 1 0.17063 1 0.02556 1 0.70967 1 18q loss 294 (30%) 701 0.0012554 1 0.017768 1 0.060719 1 0.058409 1 0.13376 1 0.7674 1 1 1 0.0101 1 0.39681 1 0.3311 1 0.15644 1 0.45787 1 19p loss 176 (18%) 819 0.10536 1 0.088458 1 0.85763 1 0.58535 1 0.40946 1 0.18338 1 1 1 9.9999e-06 0.00959 0.46137 1 0.72113 1 0.0093899 1 0.37053 1 19q loss 149 (15%) 846 0.16159 1 0.99811 1 0.66506 1 0.49855 1 0.14973 1 0.28546 1 0.67406 1 9.9999e-06 0.00959 0.093664 1 0.43623 1 0.14618 1 1 1 20p loss 85 (9%) 910 0.24026 1 0.18917 1 0.49358 1 0.067889 1 0.69121 1 0.41446 1 1 1 0.055569 1 0.31708 1 0.93226 1 0.19964 1 0.20654 1 20q loss 47 (5%) 948 0.19484 1 0.075113 1 0.071569 1 0.01198 1 0.9168 1 0.30652 1 1 1 0.12152 1 0.61923 1 0.15175 1 0.095129 1 0.082197 1 21q loss 164 (16%) 831 0.73105 1 0.431 1 0.052679 1 0.43716 1 0.02675 1 0.42283 1 0.2277 1 0.02796 1 0.39463 1 0.16678 1 0.11227 1 0.24991 1 22q loss 440 (44%) 555 0.15207 1 0.61815 1 0.69866 1 0.55207 1 0.31165 1 0.47452 1 0.55059 1 0.00204 1 0.0011114 1 0.2578 1 0.38157 1 0.86505 1 xq loss 164 (16%) 831 0.65032 1 0.12659 1 0.46943 1 0.02574 1 0.62267 1 0.1057 1 0.40317 1 0.03659 1 0.77658 1 0.43262 1 0.36453 1 1 1