Clinical Features	METHLYATION_CNMF		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1q gain	4 (14%)	24	1	1	1	1	0.6379	1	0.32593	1	0.80399	1	0.27909	1	0.69013	1
3p gain	5 (18%)	23	1	1	1	1	0.67259	1	1	1	0.43852	1	1	1	0.088659	1
3q gain	6 (21%)	22	1	1	1	1	0.51463	1	1	1	0.5408	1	1	1	0.19591	1
6p gain	3 (11%)	25	1	1	1	1	1	1	0.59556	1	0.52159	1	0.75069	1	0.18116	1
7p gain	8 (29%)	20	0.68599	1	1	1	0.45882	1	1	1	0.56034	1	1	1	0.01672	1
7q gain	7 (25%)	21	1	1	0.67029	1	0.12334	1	0.67762	1	0.50667	1	1	1	0.01648	1
10p gain	3 (11%)	25	1	1	0.58333	1	0.763	1	0.59556	1	0.88897	1	1	1	0.18148	1
11p gain	4 (14%)	24	0.31111	1	0.6	1	0.14643	1	0.097778	1	0.54709	1	1	1	1	1
11q gain	8 (29%)	20	0.40966	1	0.68599	1	0.087259	1	0.38454	1	0.11965	1	0.63114	1	0.87605	1
12p gain	3 (11%)	25	0.58333	1	0.58333	1	0.10786	1	1	1	0.7674	1	1	1	0.83109	1
12q gain	4 (14%)	24	0.31111	1	1	1	0.14497	1	0.59556	1	0.54901	1	1	1	0.96749	1
16p gain	4 (14%)	24	0.31111	1	0.6	1	0.20996	1	0.59556	1	0.80444	1	0.27559	1	0.89153	1
16q gain	4 (14%)	24	0.034921	1	0.6	1	1	1	1	1	0.80192	1	1	1	1	1
18p gain	5 (18%)	23	1	1	1	1	0.67643	1	1	1	0.85729	1	1	1	0.089159	1
18q gain	5 (18%)	23	1	1	1	1	0.67588	1	1	1	0.85717	1	1	1	0.089229	1
21q gain	6 (21%)	22	1	1	1	1	0.42536	1	0.16473	1	0.12197	1	0.31453	1	0.19269	1
xq gain	3 (11%)	25	0.087302	1	1	1	0.38513	1	1	1	0.76413	1	0.74968	1	0.97839	1
1p loss	3 (11%)	25	1	1	1	1	1	1	0.59556	1	0.88859	1	1	1	0.61188	1
6q loss	3 (11%)	25	0.58333	1	1	1	0.38714	1	0.22222	1	0.48782	1	1	1	0.82847	1
8p loss	4 (14%)	24	1	1	0.31111	1	0.35531	1	0.32593	1	0.51258	1	1	1	0.066099	1
15q loss	5 (18%)	23	0.33333	1	0.63889	1	0.44936	1	0.64831	1	0.43768	1	1	1	0.02397	1
16q loss	4 (14%)	24	1	1	1	1	0.64069	1	1	1	0.86289	1	1	1	0.43512	1
17p loss	3 (11%)	25	1	1	1	1	0.76581	1	1	1	0.88748	1	0.75047	1	0.23054	1
xq loss	3 (11%)	25	0.087302	1	0.58333	1	0.5643	1	0.59556	1	0.48679	1	0.087129	1	0.34062	1