Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBERPACKYEARSSMOKED NUMBER.OF.LYMPH.NODES RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 53 (13%) 364 0.92243 1 0.15142 1 0.80428 1 0.78263 1 0.36272 1 0.016447 1 0.41939 1 0.02364 1 0.70919 1 0.25553 1 0.27927 1 0.35635 1 0.27229 1 1q gain 95 (23%) 322 0.57542 1 0.061453 1 0.48387 1 0.33392 1 0.10298 1 0.2333 1 0.60699 1 0.050309 1 0.23609 1 0.80733 1 0.29482 1 0.02427 1 0.26215 1 2p gain 73 (18%) 344 0.10017 1 0.1998 1 0.95503 1 0.3717 1 0.51447 1 0.43634 1 0.088981 1 0.66739 1 0.74244 1 0.0032004 1 0.43614 1 0.11407 1 0.53465 1 2q gain 58 (14%) 359 0.36071 1 0.55834 1 0.79116 1 0.65992 1 0.25454 1 0.163 1 0.43743 1 1 1 0.28106 1 0.044206 1 0.30906 1 0.1177 1 0.30516 1 3p gain 68 (16%) 349 0.31114 1 0.29743 1 0.98715 1 0.46749 1 0.75981 1 0.47458 1 0.30902 1 1 1 0.49927 1 0.87226 1 0.18043 1 1 1 1 1 3q gain 207 (50%) 210 0.17029 1 0.25949 1 0.76776 1 0.9061 1 0.080669 1 0.86353 1 0.052899 1 1 1 0.060776 1 0.85628 1 0.0074325 1 0.98156 1 0.63499 1 4p gain 34 (8%) 383 0.16809 1 0.021795 1 0.64049 1 0.29708 1 0.82946 1 1 1 1 1 1 1 0.49391 1 0.66297 1 0.60242 1 0.03313 1 0.14504 1 4q gain 29 (7%) 388 0.96763 1 0.27886 1 0.01403 1 0.59416 1 0.062069 1 1 1 1 1 0.39941 1 0.32497 1 0.91077 1 0.50452 1 0.090259 1 0.10416 1 5p gain 160 (38%) 257 0.95547 1 0.21655 1 0.32038 1 0.85269 1 0.13687 1 0.16505 1 0.075634 1 0.51438 1 0.029116 1 0.17863 1 0.36662 1 0.29641 1 0.33236 1 5q gain 53 (13%) 364 0.4611 1 0.45363 1 0.275 1 0.75856 1 0.40277 1 0.080677 1 0.19502 1 0.15368 1 0.089075 1 0.69024 1 0.1 1 0.86573 1 0.06545 1 6p gain 63 (15%) 354 0.84258 1 0.10992 1 0.91485 1 0.74792 1 0.41462 1 0.36 1 0.76464 1 1 1 0.03721 1 0.19584 1 0.23794 1 0.20318 1 0.73789 1 6q gain 48 (12%) 369 0.28743 1 0.1781 1 0.56585 1 0.70041 1 0.22156 1 0.4269 1 1 1 1 1 0.01739 1 0.042653 1 0.21153 1 0.23786 1 0.13255 1 7p gain 152 (36%) 265 0.9613 1 0.38849 1 0.7486 1 0.48551 1 0.57302 1 0.46616 1 0.37214 1 0.050459 1 0.60428 1 0.077146 1 0.7651 1 0.11846 1 0.80791 1 7q gain 103 (25%) 314 0.90815 1 0.31096 1 0.80526 1 0.76749 1 0.55296 1 0.28809 1 0.53225 1 0.11208 1 0.47141 1 0.10218 1 0.87425 1 0.21548 1 0.4025 1 8p gain 116 (28%) 301 0.82252 1 0.55614 1 0.96735 1 0.5479 1 0.82858 1 1 1 0.071395 1 0.01917 1 0.40516 1 0.59278 1 0.88634 1 0.41744 1 1 1 8q gain 245 (59%) 172 0.72814 1 0.59453 1 0.27399 1 0.78945 1 0.26637 1 0.2213 1 0.44321 1 1 1 0.79974 1 0.91473 1 0.1071 1 0.52241 1 0.62632 1 9p gain 83 (20%) 334 0.20125 1 0.31418 1 0.19891 1 0.7001 1 0.089129 1 1 1 0.13663 1 1 1 0.16029 1 0.0081223 1 0.86622 1 0.77004 1 0.76923 1 9q gain 110 (26%) 307 0.71727 1 0.13492 1 0.16201 1 0.22425 1 0.23678 1 1 1 1 1 0.74642 1 0.67175 1 0.49949 1 0.49528 1 0.61565 1 0.27098 1 10p gain 30 (7%) 387 0.23819 1 0.89274 1 0.85623 1 0.91566 1 0.51058 1 0.37255 1 0.5382 1 0.40783 1 0.81218 1 0.36572 1 0.15996 1 1 1 0.38218 1 10q gain 28 (7%) 389 0.61202 1 0.7014 1 0.70728 1 0.96416 1 0.79658 1 1 1 0.82951 1 1 1 0.45196 1 0.98892 1 0.85471 1 0.35382 1 0.36505 1 11p gain 56 (13%) 361 0.80454 1 0.50291 1 0.45825 1 0.7744 1 0.13283 1 0.065428 1 0.8744 1 1 1 0.58608 1 0.19692 1 0.18584 1 0.093709 1 1 1 11q gain 58 (14%) 359 0.68882 1 0.82753 1 0.42304 1 0.76915 1 0.4175 1 0.24358 1 0.35037 1 1 1 0.58876 1 0.051451 1 0.19325 1 0.72929 1 0.48786 1 12p gain 118 (28%) 299 0.41221 1 0.87595 1 0.89126 1 0.92486 1 0.94218 1 0.69286 1 0.47384 1 0.42146 1 0.88993 1 0.092535 1 0.87238 1 0.27219 1 0.60648 1 12q gain 70 (17%) 347 0.43472 1 0.2026 1 0.42612 1 0.79061 1 0.39122 1 0.81165 1 0.88542 1 0.66163 1 0.029794 1 0.090557 1 0.28793 1 0.81126 1 0.52449 1 13q gain 49 (12%) 368 0.56549 1 0.079544 1 0.39171 1 0.61005 1 0.94291 1 1 1 0.86705 1 1 1 0.080141 1 0.87956 1 0.79611 1 0.62765 1 0.45697 1 14q gain 123 (29%) 294 0.28442 1 0.69276 1 0.85825 1 0.93034 1 0.99546 1 0.70076 1 0.3441 1 0.2369 1 0.5851 1 0.37798 1 0.97426 1 0.11336 1 0.79154 1 15q gain 64 (15%) 353 0.73387 1 0.38893 1 0.66819 1 0.04766 1 0.79322 1 0.81165 1 0.45824 1 0.65892 1 0.86239 1 0.78164 1 0.28369 1 0.62844 1 0.49492 1 16p gain 84 (20%) 333 0.099925 1 0.15758 1 0.49272 1 0.99202 1 0.50183 1 0.4613 1 0.89328 1 0.6873 1 0.75597 1 0.32877 1 0.086996 1 0.074329 1 0.76236 1 16q gain 87 (21%) 330 0.084059 1 0.32108 1 0.29244 1 0.6627 1 0.7981 1 0.33819 1 0.23227 1 1 1 0.87831 1 0.92711 1 0.53627 1 0.22607 1 0.76923 1 17p gain 53 (13%) 364 0.51165 1 0.38973 1 0.30263 1 0.17032 1 0.5981 1 1 1 0.51847 1 0.15177 1 0.70919 1 0.89488 1 0.92082 1 0.8649 1 0.06545 1 17q gain 69 (17%) 348 0.68571 1 0.65296 1 0.44636 1 0.12448 1 0.24043 1 0.81953 1 0.30928 1 0.1486 1 0.86657 1 0.27294 1 0.7179 1 0.75838 1 0.096561 1 18p gain 95 (23%) 322 0.49194 1 0.040745 1 0.3035 1 0.14125 1 0.10683 1 0.17384 1 0.00010625 0.11 0.49445 1 0.6553 1 0.26908 1 0.34218 1 0.63817 1 1 1 18q gain 37 (9%) 380 0.60377 1 0.5777 1 0.55159 1 0.85006 1 0.82637 1 1 1 0.00044883 0.466 1 1 1 1 0.71514 1 0.77143 1 0.60605 1 0.6717 1 19p gain 40 (10%) 377 0.084391 1 0.18244 1 0.55675 1 0.28231 1 0.40671 1 0.0913 1 0.46351 1 1 1 1 1 0.37752 1 0.078768 1 0.9142 1 0.69915 1 19q gain 58 (14%) 359 0.14751 1 0.54417 1 0.9929 1 0.66381 1 0.94623 1 0.11367 1 0.2762 1 0.65333 1 0.71907 1 0.43831 1 0.23591 1 0.14524 1 1 1 20p gain 154 (37%) 263 0.064839 1 0.64157 1 0.64885 1 0.76751 1 0.14472 1 0.48425 1 0.82323 1 1 1 0.24399 1 0.33006 1 0.50481 1 0.50058 1 0.12967 1 20q gain 162 (39%) 255 0.54993 1 0.99299 1 0.69509 1 0.31208 1 0.56727 1 0.48401 1 0.82575 1 0.51716 1 0.30536 1 0.85893 1 0.97929 1 0.18682 1 0.3271 1 21q gain 27 (6%) 390 0.70862 1 0.77388 1 0.04605 1 0.40611 1 0.16641 1 0.67692 1 0.045954 1 0.00325 1 0.31778 1 0.37728 1 0.38 1 0.3411 1 0.10416 1 22q gain 90 (22%) 327 0.79765 1 0.83287 1 0.79135 1 0.66657 1 0.84897 1 0.19107 1 0.603 1 0.091859 1 0.36563 1 0.014475 1 0.39978 1 0.76044 1 0.1416 1 xq gain 70 (17%) 347 0.68528 1 0.13279 1 0.19465 1 0.053119 1 0.28037 1 0.79567 1 0.5653 1 0.66432 1 0.0067647 1 0.41324 1 0.026008 1 0.21982 1 1 1 1p loss 45 (11%) 372 0.78167 1 0.06397 1 0.6302 1 0.49777 1 0.77194 1 0.39358 1 0.38439 1 0.55199 1 0.54798 1 0.0019946 1 0.28246 1 0.47885 1 1 1 1q loss 31 (7%) 386 0.48949 1 0.43178 1 0.85781 1 0.29208 1 0.82036 1 0.75625 1 0.83763 1 1 1 1 1 0.58269 1 0.25032 1 0.058739 1 1 1 2p loss 27 (6%) 390 0.9531 1 0.45869 1 0.5348 1 0.92341 1 0.43318 1 0.28564 1 0.013872 1 1 1 0.13301 1 0.41295 1 0.53037 1 0.54891 1 0.34783 1 2q loss 34 (8%) 383 0.98875 1 0.68655 1 0.10264 1 0.29712 1 0.1419 1 1 1 0.0091578 1 1 1 0.040862 1 0.46299 1 0.68564 1 0.082299 1 0.64694 1 3p loss 240 (58%) 177 0.0076348 1 0.43897 1 0.48566 1 0.10192 1 0.19546 1 0.4891 1 0.10237 1 0.086259 1 0.25881 1 0.022522 1 0.18181 1 0.082369 1 0.22555 1 3q loss 56 (13%) 361 0.05267 1 0.41534 1 0.11664 1 0.074849 1 0.17632 1 0.27364 1 0.34519 1 1 1 0.71398 1 0.0554 1 0.13135 1 0.29238 1 1 1 4p loss 156 (37%) 261 0.79114 1 0.33442 1 0.80526 1 0.30263 1 0.69302 1 0.072076 1 0.37332 1 0.79972 1 0.89809 1 0.031699 1 0.51806 1 0.84887 1 0.13886 1 4q loss 121 (29%) 296 0.29737 1 0.72881 1 0.083539 1 0.31347 1 0.14541 1 0.23674 1 0.81331 1 0.76825 1 0.099948 1 0.17759 1 0.41442 1 0.19401 1 0.18431 1 5p loss 40 (10%) 377 0.90767 1 0.25361 1 0.97137 1 0.6205 1 0.30539 1 0.76302 1 0.36658 1 1 1 0.056217 1 0.38393 1 0.32923 1 0.61451 1 0.21495 1 5q loss 133 (32%) 284 0.16713 1 0.29934 1 0.58983 1 0.065749 1 0.29799 1 0.85204 1 0.30011 1 0.77322 1 1 1 0.015188 1 0.73268 1 0.085589 1 0.80099 1 6p loss 56 (13%) 361 0.82801 1 0.49306 1 0.53487 1 0.66623 1 0.64417 1 0.4269 1 0.34519 1 1 1 0.58608 1 0.29921 1 0.70154 1 0.01772 1 0.06545 1 6q loss 57 (14%) 360 0.26062 1 0.63385 1 0.78542 1 0.6584 1 0.91282 1 0.59844 1 0.086232 1 0.64535 1 0.71591 1 0.99097 1 0.62237 1 0.078179 1 0.71895 1 7p loss 21 (5%) 396 0.89357 1 0.68597 1 0.57376 1 0.91753 1 0.11994 1 0.45847 1 0.6289 1 1 1 0.77739 1 0.69863 1 0.32083 1 0.39452 1 0.61293 1 7q loss 37 (9%) 380 0.32399 1 0.14031 1 0.88854 1 0.23092 1 0.61066 1 0.57273 1 0.70455 1 0.48204 1 0.66174 1 0.94458 1 0.60942 1 0.7456 1 1 1 8p loss 152 (36%) 265 0.92735 1 0.6065 1 0.46881 1 0.26594 1 0.39456 1 1 1 0.1449 1 0.12939 1 1 1 0.93023 1 0.11537 1 0.1766 1 0.21818 1 8q loss 25 (6%) 392 0.90579 1 0.53606 1 0.97332 1 0.17692 1 0.73819 1 1 1 0.36967 1 1 1 0.59706 1 0.080677 1 0.63752 1 0.8506 1 0.29563 1 9p loss 142 (34%) 275 0.0070631 1 0.60211 1 0.97998 1 0.51844 1 0.59381 1 0.57508 1 0.36389 1 0.12771 1 0.79276 1 1.0915e-05 0.0114 0.94647 1 0.75231 1 1 1 9q loss 66 (16%) 351 0.91067 1 0.73891 1 0.77734 1 0.15831 1 0.66984 1 0.36 1 1 1 0.65881 1 0.60927 1 0.14306 1 0.79351 1 0.41544 1 0.17472 1 10p loss 127 (30%) 290 0.026185 1 0.56687 1 0.40066 1 0.14732 1 0.44318 1 0.85192 1 0.19742 1 0.24092 1 0.2813 1 0.60382 1 0.4348 1 0.078219 1 0.79543 1 10q loss 85 (20%) 332 0.059296 1 0.2955 1 0.5365 1 0.66349 1 0.12994 1 0.40339 1 0.14211 1 0.48539 1 0.1617 1 0.21435 1 0.50084 1 0.1899 1 0.38707 1 11p loss 109 (26%) 308 0.2381 1 0.95709 1 0.062349 1 0.94635 1 0.01254 1 0.42965 1 0.5419 1 0.74468 1 0.77616 1 0.18084 1 0.013334 1 0.21778 1 0.2689 1 11q loss 134 (32%) 283 0.9786 1 0.13242 1 0.32564 1 0.97019 1 0.11835 1 0.09187 1 0.015002 1 1 1 0.14233 1 0.30824 1 0.0087034 1 0.01382 1 0.12238 1 12p loss 27 (6%) 390 0.39936 1 0.10323 1 0.65086 1 0.28826 1 0.57699 1 1 1 0.38147 1 1 1 0.61608 1 0.71644 1 0.88416 1 0.26162 1 0.31309 1 12q loss 23 (6%) 394 0.61596 1 0.5392 1 0.72676 1 0.076849 1 0.96292 1 0.70221 1 1 1 1 1 0.59109 1 0.76777 1 0.57591 1 0.096479 1 0.26068 1 13q loss 130 (31%) 287 0.85583 1 0.20344 1 0.23849 1 0.37079 1 0.5947 1 1 1 0.72775 1 0.33582 1 0.89367 1 0.17849 1 0.18259 1 0.19783 1 1 1 14q loss 37 (9%) 380 0.0026532 1 0.69404 1 0.44711 1 0.17653 1 0.91757 1 1 1 0.18629 1 1 1 0.382 1 0.53538 1 0.11825 1 0.4106 1 1 1 15q loss 76 (18%) 341 0.13571 1 0.15077 1 0.89958 1 0.32142 1 0.49403 1 0.34039 1 1 1 0.17316 1 0.25828 1 0.99485 1 0.40559 1 0.30677 1 0.3411 1 16p loss 48 (12%) 369 0.068214 1 0.0081223 1 0.75856 1 0.26841 1 0.11411 1 0.45263 1 0.73646 1 0.57683 1 0.12065 1 0.75326 1 0.1647 1 1 1 0.24898 1 16q loss 60 (14%) 357 0.41088 1 0.11862 1 0.49667 1 0.65991 1 0.13515 1 0.29178 1 0.12353 1 0.32449 1 0.47862 1 0.88371 1 0.33533 1 0.69976 1 1 1 17p loss 91 (22%) 326 0.5672 1 0.28454 1 0.38942 1 0.7926 1 0.97332 1 0.40697 1 0.43375 1 1 1 0.65001 1 0.46652 1 0.72483 1 0.76208 1 0.033729 1 17q loss 30 (7%) 387 0.12781 1 0.91398 1 0.54153 1 0.52185 1 0.40047 1 0.0913 1 0.83784 1 0.40983 1 0.33047 1 0.98691 1 0.85044 1 0.59247 1 0.12393 1 18p loss 85 (20%) 332 0.41988 1 0.66905 1 0.97025 1 0.99079 1 0.42575 1 1 1 0.28386 1 0.28533 1 0.75841 1 0.91438 1 0.99142 1 0.49138 1 0.014362 1 18q loss 177 (42%) 240 0.91493 1 0.19221 1 0.9792 1 0.83487 1 0.48305 1 0.16574 1 0.27528 1 0.22461 1 0.53066 1 0.18522 1 0.26254 1 0.03484 1 0.14147 1 19p loss 80 (19%) 337 0.25074 1 0.36373 1 0.15949 1 0.42452 1 0.15527 1 0.11726 1 0.1719 1 0.67792 1 0.26586 1 0.50545 1 0.7002 1 0.27969 1 0.36524 1 19q loss 68 (16%) 349 0.2978 1 0.15122 1 0.0444 1 0.13052 1 0.33744 1 0.33819 1 0.30902 1 1 1 0.49927 1 0.63617 1 0.66169 1 0.089689 1 0.51114 1 20p loss 42 (10%) 375 0.70967 1 0.95573 1 0.83059 1 0.96835 1 0.33142 1 0.15086 1 0.72387 1 1 1 0.67868 1 0.36067 1 0.17303 1 0.49175 1 1 1 20q loss 25 (6%) 392 0.65101 1 0.22231 1 0.32738 1 0.73857 1 0.75978 1 1 1 0.6554 1 0.35418 1 1 1 0.029702 1 0.15179 1 0.73214 1 0.61482 1 21q loss 159 (38%) 258 0.52316 1 0.83094 1 0.70226 1 0.11163 1 0.32229 1 0.16505 1 0.65824 1 0.63646 1 0.44315 1 0.037391 1 0.70772 1 0.01589 1 1 1 22q loss 64 (15%) 353 0.78911 1 0.98729 1 0.39594 1 0.45081 1 0.39809 1 0.6502 1 0.23056 1 0.65951 1 0.083894 1 0.79079 1 0.166 1 0.088609 1 0.32046 1 xq loss 65 (16%) 352 0.4758 1 0.099658 1 0.48447 1 0.096979 1 0.60815 1 0.80668 1 0.13788 1 0.3586 1 0.73268 1 0.044838 1 0.06899 1 0.94309 1 1 1