Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER KARNOFSKY.PERFORMANCE.SCORE NUMBERPACKYEARSSMOKED RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q amp_2p23.2 39 (20%) 159 0.50549 1 0.51221 1 0.33756 1 0.5652 1 0.063109 1 0.03429 1 0.33014 1 0.88599 1 0.47918 1 0.67341 1 1 1 amp_2q32.1 45 (23%) 153 0.60463 1 0.98558 1 0.0335 1 0.11786 1 0.32394 1 0.0187 1 0.57656 1 0.71855 1 0.78186 1 0.27182 1 1 1 amp_3p12.1 59 (30%) 139 0.99694 1 0.48478 1 0.064279 1 0.03091 1 1 1 0.19526 1 0.49694 1 0.038342 1 0.069493 1 0.30812 1 0.7244 1 amp_3q26.31 73 (37%) 125 0.15022 1 0.75886 1 0.32216 1 0.32714 1 1 1 0.02279 1 0.51818 1 0.15384 1 0.53672 1 0.30887 1 0.4889 1 amp_7q22.1 122 (62%) 76 0.3964 1 0.18347 1 0.00024 0.0665 0.0113 1 0.45574 1 0.63278 1 0.14935 1 0.085971 1 0.88468 1 0.76259 1 0.28818 1 amp_17q25.2 145 (73%) 53 0.97854 1 0.17958 1 0.25747 1 0.43877 1 0.82121 1 0.0053999 1 0.076884 1 0.98887 1 0.38497 1 0.49052 1 0.69066 1 amp_19p13.2 22 (11%) 176 0.73983 1 0.01278 1 0.78808 1 0.0445 1 0.61424 1 0.52692 1 0.46106 1 0.73444 1 NA NA 0.17377 1 1 1 del_1p36.32 39 (20%) 159 4.8811e-05 0.0139 0.46543 1 9.9999e-06 0.00301 2e-05 0.00582 0.0395 1 0.095949 1 0.01734 1 0.015694 1 0.56773 1 0.39626 1 1 1 del_2q37.3 9 (5%) 189 0.69662 1 0.24023 1 0.02926 1 0.01255 1 1 1 0.78453 1 0.12629 1 NA NA 0.51066 1 1 1 1 1 del_3p22.1 17 (9%) 181 1.1017e-06 0.000339 0.23571 1 9.9999e-06 0.00301 4e-05 0.0115 0.34019 1 0.12392 1 0.58332 1 0.15161 1 0.56773 1 0.50932 1 1 1 del_4q34.3 24 (12%) 174 0.019249 1 0.31651 1 5.9999e-05 0.017 0.00024 0.0665 0.082309 1 0.43732 1 0.0074522 1 0.46857 1 NA NA 0.16007 1 1 1 del_5p14.2 10 (5%) 188 0.0095128 1 0.13825 1 0.0068199 1 0.00024 0.0665 0.0117 1 0.45343 1 0.06659 1 0.48963 1 NA NA 1 1 0.29427 1 del_5q35.2 11 (6%) 187 0.19312 1 0.0079733 1 0.00080999 0.22 2e-05 0.00582 0.11634 1 0.33884 1 0.016113 1 NA NA NA NA 0.59065 1 0.33499 1 del_6p12.3 18 (9%) 180 0.45033 1 0.94977 1 0.0011 0.298 0.00194 0.516 0.092849 1 0.30374 1 0.41583 1 0.75266 1 0.27293 1 0.14524 1 1 1 del_6q22.31 20 (10%) 178 0.69725 1 0.73846 1 0.0060299 1 0.00023 0.0639 0.11828 1 0.38812 1 0.016892 1 0.76801 1 0.6171 1 0.04757 1 1 1 del_6q27 23 (12%) 175 0.18415 1 0.62305 1 0.00019 0.053 9.9999e-06 0.00301 0.15608 1 0.65695 1 0.0058294 1 0.44025 1 0.44109 1 0.04608 1 0.59923 1 del_9p21.3 29 (15%) 169 0.00052729 0.144 0.55272 1 9.9999e-06 0.00301 9.9999e-06 0.00301 0.0055799 1 0.02601 1 0.001701 0.456 0.049177 1 0.02833 1 0.0464 1 0.35824 1 del_10p11.21 12 (6%) 186 0.0069076 1 0.95577 1 0.00131 0.354 0.00351 0.916 0.068769 1 0.22618 1 0.043177 1 0.3167 1 NA NA 0.30186 1 1 1 del_11q22.3 20 (10%) 178 6.481e-06 0.00196 0.095869 1 4e-05 0.0115 9.9999e-05 0.0283 0.01546 1 0.33482 1 0.30257 1 0.21889 1 0.81537 1 0.41115 1 1 1 del_11q24.2 20 (10%) 178 1.7528e-06 0.000538 0.05196 1 9.9999e-06 0.00301 9.9999e-06 0.00301 0.03909 1 0.33496 1 0.60649 1 0.21889 1 0.40472 1 0.55096 1 1 1 del_14q11.2 40 (20%) 158 0.0055945 1 0.90778 1 0.0077399 1 0.00385 1 0.092529 1 0.42296 1 0.019447 1 0.19558 1 0.29257 1 0.75776 1 0.68603 1 del_15q13.3 25 (13%) 173 7.4413e-06 0.00225 0.088006 1 0.00011 0.031 3e-05 0.00864 0.00315 0.828 0.12485 1 0.24127 1 0.022329 1 NA NA 0.48857 1 1 1 del_16q24.1 9 (5%) 189 1.0455e-05 0.00305 0.18629 1 0.04416 1 0.13182 1 0.078859 1 0.18719 1 0.45292 1 0.48963 1 NA NA 1 1 1 1 del_19p13.3 17 (9%) 181 2.2328e-05 0.00645 0.76303 1 0.00156 0.42 0.00063999 0.175 0.095889 1 0.34167 1 0.58332 1 0.010251 1 0.79246 1 0.58724 1 0.60094 1 del_19q13.42 16 (8%) 182 5.3805e-06 0.00164 0.60764 1 0.00298 0.787 0.00249 0.66 0.43555 1 0.2779 1 0.56686 1 0.15161 1 NA NA 0.29538 1 1 1 del_21q22.3 33 (17%) 165 0.31651 1 0.65095 1 0.01623 1 0.0073499 1 0.64537 1 0.22558 1 0.092623 1 0.10472 1 1 1 0.48593 1 1 1 del_22q12.2 50 (25%) 148 0.0068189 1 0.33781 1 9.9999e-06 0.00301 9.9999e-06 0.00301 0.0070399 1 0.04048 1 0.0039 1 0.49584 1 0.53834 1 0.12276 1 0.42791 1 del_xp11.22 20 (10%) 178 2.8025e-06 0.000855 0.39547 1 0.00015 0.042 0.00011 0.031 0.04615 1 0.82357 1 0.0031888 0.835 0.46857 1 0.79246 1 0.03799 1 1 1 del_xq28 19 (10%) 179 2.6925e-06 0.000824 0.095171 1 0.00174 0.465 0.00495 1 0.04589 1 0.8362 1 0.0069272 1 0.32187 1 NA NA 0.075229 1 1 1