This pipeline computes the correlation between significantly recurrent gene mutations and molecular subtypes.
Testing the association between mutation status of 28 genes and 8 molecular subtypes across 168 patients, 2 significant findings detected with P value < 0.05 and Q value < 0.25.
-
SETD2 mutation correlated to 'METHLYATION_CNMF'.
-
MET mutation correlated to 'MRNASEQ_CNMF'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nMutated (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
SETD2 | 15 (9%) | 153 |
0.105 (1.00) |
0.00103 (0.23) |
0.0715 (1.00) |
0.226 (1.00) |
0.888 (1.00) |
0.718 (1.00) |
0.943 (1.00) |
0.091 (1.00) |
MET | 15 (9%) | 153 |
0.696 (1.00) |
0.072 (1.00) |
0.00056 (0.125) |
0.0113 (1.00) |
0.745 (1.00) |
0.633 (1.00) |
0.747 (1.00) |
0.069 (1.00) |
HNRNPM | 11 (7%) | 157 |
1 (1.00) |
0.382 (1.00) |
0.594 (1.00) |
0.497 (1.00) |
0.579 (1.00) |
0.541 (1.00) |
0.924 (1.00) |
0.411 (1.00) |
NF2 | 12 (7%) | 156 |
0.0695 (1.00) |
0.0148 (1.00) |
0.034 (1.00) |
0.932 (1.00) |
0.933 (1.00) |
0.676 (1.00) |
1 (1.00) |
0.697 (1.00) |
NEFH | 10 (6%) | 158 |
0.238 (1.00) |
0.911 (1.00) |
0.115 (1.00) |
0.227 (1.00) |
0.0128 (1.00) |
0.00291 (0.646) |
0.00303 (0.67) |
0.0982 (1.00) |
TDG | 5 (3%) | 163 |
0.324 (1.00) |
0.277 (1.00) |
0.866 (1.00) |
0.325 (1.00) |
0.0766 (1.00) |
0.584 (1.00) |
0.16 (1.00) |
0.683 (1.00) |
ZNF598 | 13 (8%) | 155 |
0.194 (1.00) |
0.444 (1.00) |
0.112 (1.00) |
0.62 (1.00) |
0.179 (1.00) |
0.145 (1.00) |
0.441 (1.00) |
0.00565 (1.00) |
SKI | 6 (4%) | 162 |
0.86 (1.00) |
0.0624 (1.00) |
0.162 (1.00) |
0.876 (1.00) |
0.775 (1.00) |
1 (1.00) |
0.879 (1.00) |
0.665 (1.00) |
CSGALNACT2 | 7 (4%) | 161 |
0.0647 (1.00) |
0.295 (1.00) |
0.505 (1.00) |
0.889 (1.00) |
0.0813 (1.00) |
0.764 (1.00) |
0.207 (1.00) |
0.979 (1.00) |
MUC5B | 18 (11%) | 150 |
0.881 (1.00) |
0.849 (1.00) |
0.746 (1.00) |
0.606 (1.00) |
0.492 (1.00) |
0.186 (1.00) |
0.155 (1.00) |
0.651 (1.00) |
KDM6A | 9 (5%) | 159 |
0.449 (1.00) |
0.831 (1.00) |
0.108 (1.00) |
0.39 (1.00) |
0.689 (1.00) |
0.732 (1.00) |
0.258 (1.00) |
0.208 (1.00) |
ZNF814 | 8 (5%) | 160 |
0.46 (1.00) |
0.483 (1.00) |
0.713 (1.00) |
0.314 (1.00) |
0.597 (1.00) |
0.553 (1.00) |
0.6 (1.00) |
0.662 (1.00) |
OR2L8 | 4 (2%) | 164 |
0.458 (1.00) |
0.301 (1.00) |
0.481 (1.00) |
0.108 (1.00) |
0.322 (1.00) |
0.313 (1.00) |
0.2 (1.00) |
0.704 (1.00) |
MYH6 | 8 (5%) | 160 |
0.297 (1.00) |
0.294 (1.00) |
0.409 (1.00) |
0.599 (1.00) |
0.905 (1.00) |
0.235 (1.00) |
0.823 (1.00) |
0.313 (1.00) |
UNC13A | 9 (5%) | 159 |
0.0753 (1.00) |
0.834 (1.00) |
0.186 (1.00) |
0.833 (1.00) |
0.913 (1.00) |
0.483 (1.00) |
1 (1.00) |
0.525 (1.00) |
MED16 | 4 (2%) | 164 |
0.0867 (1.00) |
0.0965 (1.00) |
0.638 (1.00) |
0.198 (1.00) |
1 (1.00) |
0.315 (1.00) |
1 (1.00) |
0.29 (1.00) |
GLUD2 | 11 (7%) | 157 |
1 (1.00) |
0.924 (1.00) |
0.464 (1.00) |
0.127 (1.00) |
0.28 (1.00) |
0.448 (1.00) |
0.0432 (1.00) |
0.728 (1.00) |
BMS1 | 13 (8%) | 155 |
0.784 (1.00) |
0.672 (1.00) |
0.427 (1.00) |
0.716 (1.00) |
0.936 (1.00) |
0.052 (1.00) |
0.633 (1.00) |
0.0989 (1.00) |
FUS | 3 (2%) | 165 |
1 (1.00) |
0.262 (1.00) |
0.44 (1.00) |
0.778 (1.00) |
0.64 (1.00) |
1 (1.00) |
0.633 (1.00) |
0.839 (1.00) |
TP53 | 7 (4%) | 161 |
0.201 (1.00) |
0.0507 (1.00) |
0.353 (1.00) |
0.178 (1.00) |
0.707 (1.00) |
0.291 (1.00) |
0.792 (1.00) |
0.161 (1.00) |
ACADL | 4 (2%) | 164 |
0.35 (1.00) |
0.48 (1.00) |
1 (1.00) |
0.463 (1.00) |
0.0181 (1.00) |
0.394 (1.00) |
0.146 (1.00) |
0.352 (1.00) |
AHNAK2 | 10 (6%) | 158 |
0.435 (1.00) |
0.317 (1.00) |
0.0217 (1.00) |
0.249 (1.00) |
0.229 (1.00) |
0.104 (1.00) |
0.715 (1.00) |
0.0327 (1.00) |
SMARCB1 | 5 (3%) | 163 |
1 (1.00) |
0.0606 (1.00) |
0.316 (1.00) |
0.322 (1.00) |
0.012 (1.00) |
0.493 (1.00) |
0.0122 (1.00) |
0.918 (1.00) |
TEKT1 | 4 (2%) | 164 |
0.607 (1.00) |
0.686 (1.00) |
0.906 (1.00) |
0.831 (1.00) |
0.463 (1.00) |
0.514 (1.00) |
1 (1.00) |
0.362 (1.00) |
MKL1 | 9 (5%) | 159 |
0.0773 (1.00) |
0.717 (1.00) |
0.142 (1.00) |
0.472 (1.00) |
0.913 (1.00) |
0.278 (1.00) |
1 (1.00) |
0.996 (1.00) |
MYH7 | 6 (4%) | 162 |
0.606 (1.00) |
1 (1.00) |
0.376 (1.00) |
0.383 (1.00) |
0.774 (1.00) |
0.0372 (1.00) |
0.88 (1.00) |
0.251 (1.00) |
MAP4K3 | 5 (3%) | 163 |
0.827 (1.00) |
0.379 (1.00) |
0.274 (1.00) |
0.228 (1.00) |
0.133 (1.00) |
0.203 (1.00) |
0.104 (1.00) |
0.759 (1.00) |
NEK2 | 3 (2%) | 165 |
1 (1.00) |
0.784 (1.00) |
0.515 (1.00) |
0.196 (1.00) |
0.296 (1.00) |
0.182 (1.00) |
0.273 (1.00) |
0.696 (1.00) |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
HNRNPM MUTATED | 4 | 6 | 1 |
HNRNPM WILD-TYPE | 57 | 79 | 21 |
P value = 0.382 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
HNRNPM MUTATED | 5 | 3 | 3 |
HNRNPM WILD-TYPE | 37 | 44 | 61 |
P value = 0.594 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
HNRNPM MUTATED | 1 | 4 | 3 | 3 |
HNRNPM WILD-TYPE | 36 | 57 | 41 | 23 |
P value = 0.497 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
HNRNPM MUTATED | 3 | 3 | 5 |
HNRNPM WILD-TYPE | 61 | 51 | 45 |
P value = 0.579 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
HNRNPM MUTATED | 2 | 4 | 5 |
HNRNPM WILD-TYPE | 54 | 46 | 57 |
P value = 0.541 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
HNRNPM MUTATED | 4 | 3 | 4 |
HNRNPM WILD-TYPE | 77 | 27 | 53 |
P value = 0.924 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
HNRNPM MUTATED | 3 | 3 | 5 |
HNRNPM WILD-TYPE | 57 | 43 | 57 |
P value = 0.411 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
HNRNPM MUTATED | 2 | 0 | 1 | 1 | 4 | 3 | 0 |
HNRNPM WILD-TYPE | 18 | 27 | 22 | 19 | 27 | 28 | 16 |
P value = 0.0695 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
NF2 MUTATED | 1 | 9 | 2 |
NF2 WILD-TYPE | 60 | 76 | 20 |
P value = 0.0148 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
NF2 MUTATED | 0 | 7 | 4 |
NF2 WILD-TYPE | 42 | 40 | 60 |
P value = 0.034 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
NF2 MUTATED | 0 | 7 | 5 | 0 |
NF2 WILD-TYPE | 37 | 54 | 39 | 26 |
P value = 0.932 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
NF2 MUTATED | 4 | 4 | 4 |
NF2 WILD-TYPE | 60 | 50 | 46 |
P value = 0.933 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
NF2 MUTATED | 4 | 3 | 5 |
NF2 WILD-TYPE | 52 | 47 | 57 |
P value = 0.676 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
NF2 MUTATED | 6 | 1 | 5 |
NF2 WILD-TYPE | 75 | 29 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
NF2 MUTATED | 4 | 3 | 5 |
NF2 WILD-TYPE | 56 | 43 | 57 |
P value = 0.697 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
NF2 MUTATED | 1 | 2 | 2 | 1 | 1 | 2 | 3 |
NF2 WILD-TYPE | 19 | 25 | 21 | 19 | 30 | 29 | 13 |
P value = 0.238 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
NEFH MUTATED | 3 | 4 | 3 |
NEFH WILD-TYPE | 58 | 81 | 19 |
P value = 0.911 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
NEFH MUTATED | 3 | 2 | 4 |
NEFH WILD-TYPE | 39 | 45 | 60 |
P value = 0.115 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
NEFH MUTATED | 5 | 2 | 3 | 0 |
NEFH WILD-TYPE | 32 | 59 | 41 | 26 |
P value = 0.227 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
NEFH MUTATED | 6 | 1 | 3 |
NEFH WILD-TYPE | 58 | 53 | 47 |
P value = 0.0128 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
NEFH MUTATED | 6 | 4 | 0 |
NEFH WILD-TYPE | 50 | 46 | 62 |
P value = 0.00291 (Fisher's exact test), Q value = 0.65
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
NEFH MUTATED | 10 | 0 | 0 |
NEFH WILD-TYPE | 71 | 30 | 57 |
P value = 0.00303 (Fisher's exact test), Q value = 0.67
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
NEFH MUTATED | 8 | 2 | 0 |
NEFH WILD-TYPE | 52 | 44 | 62 |
P value = 0.0982 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
NEFH MUTATED | 2 | 2 | 4 | 0 | 0 | 2 | 0 |
NEFH WILD-TYPE | 18 | 25 | 19 | 20 | 31 | 29 | 16 |
P value = 0.324 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
TDG MUTATED | 3 | 1 | 1 |
TDG WILD-TYPE | 58 | 84 | 21 |
P value = 0.277 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
TDG MUTATED | 0 | 3 | 2 |
TDG WILD-TYPE | 42 | 44 | 62 |
P value = 0.866 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
TDG MUTATED | 1 | 3 | 1 | 0 |
TDG WILD-TYPE | 36 | 58 | 43 | 26 |
P value = 0.325 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
TDG MUTATED | 3 | 0 | 2 |
TDG WILD-TYPE | 61 | 54 | 48 |
P value = 0.0766 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
TDG MUTATED | 4 | 0 | 1 |
TDG WILD-TYPE | 52 | 50 | 61 |
P value = 0.584 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
TDG MUTATED | 4 | 0 | 1 |
TDG WILD-TYPE | 77 | 30 | 56 |
P value = 0.16 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
TDG MUTATED | 4 | 0 | 1 |
TDG WILD-TYPE | 56 | 46 | 61 |
P value = 0.683 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
TDG MUTATED | 1 | 2 | 1 | 0 | 1 | 0 | 0 |
TDG WILD-TYPE | 19 | 25 | 22 | 20 | 30 | 31 | 16 |
P value = 0.194 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
ZNF598 MUTATED | 2 | 8 | 3 |
ZNF598 WILD-TYPE | 59 | 77 | 19 |
P value = 0.444 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
ZNF598 MUTATED | 4 | 5 | 3 |
ZNF598 WILD-TYPE | 38 | 42 | 61 |
P value = 0.112 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
ZNF598 MUTATED | 1 | 5 | 2 | 5 |
ZNF598 WILD-TYPE | 36 | 56 | 42 | 21 |
P value = 0.62 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
ZNF598 MUTATED | 4 | 6 | 3 |
ZNF598 WILD-TYPE | 60 | 48 | 47 |
P value = 0.179 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
ZNF598 MUTATED | 2 | 3 | 8 |
ZNF598 WILD-TYPE | 54 | 47 | 54 |
P value = 0.145 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
ZNF598 MUTATED | 3 | 3 | 7 |
ZNF598 WILD-TYPE | 78 | 27 | 50 |
P value = 0.441 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
ZNF598 MUTATED | 3 | 3 | 7 |
ZNF598 WILD-TYPE | 57 | 43 | 55 |
P value = 0.00565 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
ZNF598 MUTATED | 0 | 3 | 0 | 1 | 7 | 0 | 2 |
ZNF598 WILD-TYPE | 20 | 24 | 23 | 19 | 24 | 31 | 14 |
P value = 0.86 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
SKI MUTATED | 2 | 4 | 0 |
SKI WILD-TYPE | 59 | 81 | 22 |
P value = 0.0624 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
SKI MUTATED | 4 | 0 | 2 |
SKI WILD-TYPE | 38 | 47 | 62 |
P value = 0.162 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
SKI MUTATED | 1 | 1 | 1 | 3 |
SKI WILD-TYPE | 36 | 60 | 43 | 23 |
P value = 0.876 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
SKI MUTATED | 3 | 2 | 1 |
SKI WILD-TYPE | 61 | 52 | 49 |
P value = 0.775 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
SKI MUTATED | 3 | 1 | 2 |
SKI WILD-TYPE | 53 | 49 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
SKI MUTATED | 3 | 1 | 2 |
SKI WILD-TYPE | 78 | 29 | 55 |
P value = 0.879 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
SKI MUTATED | 2 | 1 | 3 |
SKI WILD-TYPE | 58 | 45 | 59 |
P value = 0.665 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
SKI MUTATED | 0 | 2 | 0 | 0 | 2 | 2 | 0 |
SKI WILD-TYPE | 20 | 25 | 23 | 20 | 29 | 29 | 16 |
P value = 0.0647 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
CSGALNACT2 MUTATED | 1 | 3 | 3 |
CSGALNACT2 WILD-TYPE | 60 | 82 | 19 |
P value = 0.295 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
CSGALNACT2 MUTATED | 4 | 1 | 2 |
CSGALNACT2 WILD-TYPE | 38 | 46 | 62 |
P value = 0.505 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
CSGALNACT2 MUTATED | 0 | 4 | 2 | 1 |
CSGALNACT2 WILD-TYPE | 37 | 57 | 42 | 25 |
P value = 0.889 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
CSGALNACT2 MUTATED | 2 | 3 | 2 |
CSGALNACT2 WILD-TYPE | 62 | 51 | 48 |
P value = 0.0813 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
CSGALNACT2 MUTATED | 1 | 5 | 1 |
CSGALNACT2 WILD-TYPE | 55 | 45 | 61 |
P value = 0.764 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
CSGALNACT2 MUTATED | 3 | 2 | 2 |
CSGALNACT2 WILD-TYPE | 78 | 28 | 55 |
P value = 0.207 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
CSGALNACT2 MUTATED | 2 | 4 | 1 |
CSGALNACT2 WILD-TYPE | 58 | 42 | 61 |
P value = 0.979 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
CSGALNACT2 MUTATED | 0 | 1 | 1 | 1 | 2 | 1 | 1 |
CSGALNACT2 WILD-TYPE | 20 | 26 | 22 | 19 | 29 | 30 | 15 |
P value = 0.105 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
SETD2 MUTATED | 2 | 10 | 3 |
SETD2 WILD-TYPE | 59 | 75 | 19 |
P value = 0.00103 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
SETD2 MUTATED | 1 | 11 | 3 |
SETD2 WILD-TYPE | 41 | 36 | 61 |
P value = 0.0715 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
SETD2 MUTATED | 2 | 10 | 3 | 0 |
SETD2 WILD-TYPE | 35 | 51 | 41 | 26 |
P value = 0.226 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
SETD2 MUTATED | 9 | 3 | 3 |
SETD2 WILD-TYPE | 55 | 51 | 47 |
P value = 0.888 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
SETD2 MUTATED | 6 | 4 | 5 |
SETD2 WILD-TYPE | 50 | 46 | 57 |
P value = 0.718 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
SETD2 MUTATED | 9 | 2 | 4 |
SETD2 WILD-TYPE | 72 | 28 | 53 |
P value = 0.943 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
SETD2 MUTATED | 6 | 4 | 5 |
SETD2 WILD-TYPE | 54 | 42 | 57 |
P value = 0.091 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
SETD2 MUTATED | 1 | 6 | 0 | 0 | 3 | 4 | 1 |
SETD2 WILD-TYPE | 19 | 21 | 23 | 20 | 28 | 27 | 15 |
P value = 0.696 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MET MUTATED | 7 | 7 | 1 |
MET WILD-TYPE | 54 | 78 | 21 |
P value = 0.072 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MET MUTATED | 3 | 1 | 9 |
MET WILD-TYPE | 39 | 46 | 55 |
P value = 0.00056 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MET MUTATED | 1 | 1 | 6 | 7 |
MET WILD-TYPE | 36 | 60 | 38 | 19 |
P value = 0.0113 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MET MUTATED | 4 | 10 | 1 |
MET WILD-TYPE | 60 | 44 | 49 |
P value = 0.745 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MET MUTATED | 6 | 3 | 6 |
MET WILD-TYPE | 50 | 47 | 56 |
P value = 0.633 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MET MUTATED | 6 | 2 | 7 |
MET WILD-TYPE | 75 | 28 | 50 |
P value = 0.747 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MET MUTATED | 5 | 3 | 7 |
MET WILD-TYPE | 55 | 43 | 55 |
P value = 0.069 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MET MUTATED | 4 | 1 | 1 | 5 | 2 | 2 | 0 |
MET WILD-TYPE | 16 | 26 | 22 | 15 | 29 | 29 | 16 |
P value = 0.881 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MUC5B MUTATED | 6 | 9 | 3 |
MUC5B WILD-TYPE | 55 | 76 | 19 |
P value = 0.849 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MUC5B MUTATED | 5 | 6 | 6 |
MUC5B WILD-TYPE | 37 | 41 | 58 |
P value = 0.746 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MUC5B MUTATED | 3 | 9 | 4 | 2 |
MUC5B WILD-TYPE | 34 | 52 | 40 | 24 |
P value = 0.606 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MUC5B MUTATED | 9 | 5 | 4 |
MUC5B WILD-TYPE | 55 | 49 | 46 |
P value = 0.492 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MUC5B MUTATED | 5 | 4 | 9 |
MUC5B WILD-TYPE | 51 | 46 | 53 |
P value = 0.186 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MUC5B MUTATED | 10 | 5 | 3 |
MUC5B WILD-TYPE | 71 | 25 | 54 |
P value = 0.155 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MUC5B MUTATED | 6 | 2 | 10 |
MUC5B WILD-TYPE | 54 | 44 | 52 |
P value = 0.651 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MUC5B MUTATED | 2 | 6 | 1 | 2 | 3 | 3 | 1 |
MUC5B WILD-TYPE | 18 | 21 | 22 | 18 | 28 | 28 | 15 |
P value = 0.449 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
KDM6A MUTATED | 5 | 3 | 1 |
KDM6A WILD-TYPE | 56 | 82 | 21 |
P value = 0.831 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
KDM6A MUTATED | 3 | 3 | 3 |
KDM6A WILD-TYPE | 39 | 44 | 61 |
P value = 0.108 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
KDM6A MUTATED | 5 | 2 | 2 | 0 |
KDM6A WILD-TYPE | 32 | 59 | 42 | 26 |
P value = 0.39 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
KDM6A MUTATED | 5 | 1 | 3 |
KDM6A WILD-TYPE | 59 | 53 | 47 |
P value = 0.689 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
KDM6A MUTATED | 4 | 3 | 2 |
KDM6A WILD-TYPE | 52 | 47 | 60 |
P value = 0.732 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
KDM6A MUTATED | 5 | 2 | 2 |
KDM6A WILD-TYPE | 76 | 28 | 55 |
P value = 0.258 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
KDM6A MUTATED | 5 | 3 | 1 |
KDM6A WILD-TYPE | 55 | 43 | 61 |
P value = 0.208 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
KDM6A MUTATED | 3 | 1 | 1 | 0 | 0 | 3 | 1 |
KDM6A WILD-TYPE | 17 | 26 | 22 | 20 | 31 | 28 | 15 |
P value = 0.46 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
ZNF814 MUTATED | 3 | 3 | 2 |
ZNF814 WILD-TYPE | 58 | 82 | 20 |
P value = 0.483 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
ZNF814 MUTATED | 1 | 4 | 3 |
ZNF814 WILD-TYPE | 41 | 43 | 61 |
P value = 0.713 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
ZNF814 MUTATED | 2 | 4 | 2 | 0 |
ZNF814 WILD-TYPE | 35 | 57 | 42 | 26 |
P value = 0.314 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
ZNF814 MUTATED | 5 | 1 | 2 |
ZNF814 WILD-TYPE | 59 | 53 | 48 |
P value = 0.597 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
ZNF814 MUTATED | 3 | 1 | 4 |
ZNF814 WILD-TYPE | 53 | 49 | 58 |
P value = 0.553 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
ZNF814 MUTATED | 5 | 0 | 3 |
ZNF814 WILD-TYPE | 76 | 30 | 54 |
P value = 0.6 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
ZNF814 MUTATED | 3 | 1 | 4 |
ZNF814 WILD-TYPE | 57 | 45 | 58 |
P value = 0.662 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
ZNF814 MUTATED | 0 | 3 | 1 | 0 | 2 | 1 | 1 |
ZNF814 WILD-TYPE | 20 | 24 | 22 | 20 | 29 | 30 | 15 |
P value = 0.458 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
OR2L8 MUTATED | 2 | 1 | 1 |
OR2L8 WILD-TYPE | 59 | 84 | 21 |
P value = 0.301 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
OR2L8 MUTATED | 2 | 0 | 2 |
OR2L8 WILD-TYPE | 40 | 47 | 62 |
P value = 0.481 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
OR2L8 MUTATED | 0 | 1 | 2 | 1 |
OR2L8 WILD-TYPE | 37 | 60 | 42 | 25 |
P value = 0.108 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
OR2L8 MUTATED | 0 | 3 | 1 |
OR2L8 WILD-TYPE | 64 | 51 | 49 |
P value = 0.322 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
OR2L8 MUTATED | 0 | 1 | 3 |
OR2L8 WILD-TYPE | 56 | 49 | 59 |
P value = 0.313 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
OR2L8 MUTATED | 1 | 0 | 3 |
OR2L8 WILD-TYPE | 80 | 30 | 54 |
P value = 0.2 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
OR2L8 MUTATED | 0 | 1 | 3 |
OR2L8 WILD-TYPE | 60 | 45 | 59 |
P value = 0.704 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
OR2L8 MUTATED | 0 | 0 | 0 | 1 | 2 | 1 | 0 |
OR2L8 WILD-TYPE | 20 | 27 | 23 | 19 | 29 | 30 | 16 |
P value = 0.297 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MYH6 MUTATED | 1 | 6 | 1 |
MYH6 WILD-TYPE | 60 | 79 | 21 |
P value = 0.294 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MYH6 MUTATED | 4 | 1 | 3 |
MYH6 WILD-TYPE | 38 | 46 | 61 |
P value = 0.409 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MYH6 MUTATED | 1 | 2 | 2 | 3 |
MYH6 WILD-TYPE | 36 | 59 | 42 | 23 |
P value = 0.599 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MYH6 MUTATED | 2 | 4 | 2 |
MYH6 WILD-TYPE | 62 | 50 | 48 |
P value = 0.905 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MYH6 MUTATED | 2 | 3 | 3 |
MYH6 WILD-TYPE | 54 | 47 | 59 |
P value = 0.235 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MYH6 MUTATED | 2 | 1 | 5 |
MYH6 WILD-TYPE | 79 | 29 | 52 |
P value = 0.823 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MYH6 MUTATED | 2 | 3 | 3 |
MYH6 WILD-TYPE | 58 | 43 | 59 |
P value = 0.313 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MYH6 MUTATED | 2 | 0 | 0 | 1 | 2 | 1 | 2 |
MYH6 WILD-TYPE | 18 | 27 | 23 | 19 | 29 | 30 | 14 |
P value = 0.0753 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
UNC13A MUTATED | 1 | 8 | 0 |
UNC13A WILD-TYPE | 60 | 77 | 22 |
P value = 0.834 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
UNC13A MUTATED | 3 | 3 | 3 |
UNC13A WILD-TYPE | 39 | 44 | 61 |
P value = 0.186 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
UNC13A MUTATED | 0 | 4 | 2 | 3 |
UNC13A WILD-TYPE | 37 | 57 | 42 | 23 |
P value = 0.833 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
UNC13A MUTATED | 4 | 2 | 3 |
UNC13A WILD-TYPE | 60 | 52 | 47 |
P value = 0.913 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
UNC13A MUTATED | 3 | 2 | 4 |
UNC13A WILD-TYPE | 53 | 48 | 58 |
P value = 0.483 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
UNC13A MUTATED | 3 | 1 | 5 |
UNC13A WILD-TYPE | 78 | 29 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
UNC13A MUTATED | 3 | 2 | 4 |
UNC13A WILD-TYPE | 57 | 44 | 58 |
P value = 0.525 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
UNC13A MUTATED | 1 | 2 | 0 | 1 | 4 | 1 | 0 |
UNC13A WILD-TYPE | 19 | 25 | 23 | 19 | 27 | 30 | 16 |
P value = 0.0867 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MED16 MUTATED | 0 | 2 | 2 |
MED16 WILD-TYPE | 61 | 83 | 20 |
P value = 0.0965 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MED16 MUTATED | 1 | 3 | 0 |
MED16 WILD-TYPE | 41 | 44 | 64 |
P value = 0.638 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MED16 MUTATED | 1 | 2 | 0 | 1 |
MED16 WILD-TYPE | 36 | 59 | 44 | 25 |
P value = 0.198 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MED16 MUTATED | 1 | 3 | 0 |
MED16 WILD-TYPE | 63 | 51 | 50 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MED16 MUTATED | 1 | 1 | 2 |
MED16 WILD-TYPE | 55 | 49 | 60 |
P value = 0.315 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MED16 MUTATED | 1 | 0 | 3 |
MED16 WILD-TYPE | 80 | 30 | 54 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MED16 MUTATED | 1 | 1 | 2 |
MED16 WILD-TYPE | 59 | 45 | 60 |
P value = 0.29 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MED16 MUTATED | 1 | 0 | 0 | 0 | 2 | 0 | 1 |
MED16 WILD-TYPE | 19 | 27 | 23 | 20 | 29 | 31 | 15 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
GLUD2 MUTATED | 4 | 6 | 1 |
GLUD2 WILD-TYPE | 57 | 79 | 21 |
P value = 0.924 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
GLUD2 MUTATED | 3 | 4 | 4 |
GLUD2 WILD-TYPE | 39 | 43 | 60 |
P value = 0.464 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
GLUD2 MUTATED | 4 | 4 | 1 | 2 |
GLUD2 WILD-TYPE | 33 | 57 | 43 | 24 |
P value = 0.127 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
GLUD2 MUTATED | 7 | 1 | 3 |
GLUD2 WILD-TYPE | 57 | 53 | 47 |
P value = 0.28 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
GLUD2 MUTATED | 6 | 3 | 2 |
GLUD2 WILD-TYPE | 50 | 47 | 60 |
P value = 0.448 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
GLUD2 MUTATED | 6 | 3 | 2 |
GLUD2 WILD-TYPE | 75 | 27 | 55 |
P value = 0.0432 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
GLUD2 MUTATED | 8 | 1 | 2 |
GLUD2 WILD-TYPE | 52 | 45 | 60 |
P value = 0.728 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
GLUD2 MUTATED | 2 | 3 | 2 | 0 | 2 | 2 | 0 |
GLUD2 WILD-TYPE | 18 | 24 | 21 | 20 | 29 | 29 | 16 |
P value = 0.784 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
BMS1 MUTATED | 4 | 8 | 1 |
BMS1 WILD-TYPE | 57 | 77 | 21 |
P value = 0.672 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
BMS1 MUTATED | 3 | 2 | 6 |
BMS1 WILD-TYPE | 39 | 45 | 58 |
P value = 0.427 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
BMS1 MUTATED | 3 | 3 | 3 | 4 |
BMS1 WILD-TYPE | 34 | 58 | 41 | 22 |
P value = 0.716 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
BMS1 MUTATED | 4 | 4 | 5 |
BMS1 WILD-TYPE | 60 | 50 | 45 |
P value = 0.936 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
BMS1 MUTATED | 5 | 4 | 4 |
BMS1 WILD-TYPE | 51 | 46 | 58 |
P value = 0.052 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
BMS1 MUTATED | 10 | 2 | 1 |
BMS1 WILD-TYPE | 71 | 28 | 56 |
P value = 0.633 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
BMS1 MUTATED | 3 | 4 | 6 |
BMS1 WILD-TYPE | 57 | 42 | 56 |
P value = 0.0989 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
BMS1 MUTATED | 1 | 0 | 4 | 0 | 2 | 5 | 1 |
BMS1 WILD-TYPE | 19 | 27 | 19 | 20 | 29 | 26 | 15 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
FUS MUTATED | 1 | 2 | 0 |
FUS WILD-TYPE | 60 | 83 | 22 |
P value = 0.262 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
FUS MUTATED | 1 | 2 | 0 |
FUS WILD-TYPE | 41 | 45 | 64 |
P value = 0.44 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
FUS MUTATED | 0 | 2 | 0 | 1 |
FUS WILD-TYPE | 37 | 59 | 44 | 25 |
P value = 0.778 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
FUS MUTATED | 2 | 1 | 0 |
FUS WILD-TYPE | 62 | 53 | 50 |
P value = 0.64 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
FUS MUTATED | 2 | 0 | 1 |
FUS WILD-TYPE | 54 | 50 | 61 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
FUS MUTATED | 2 | 0 | 1 |
FUS WILD-TYPE | 79 | 30 | 56 |
P value = 0.633 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
FUS MUTATED | 2 | 0 | 1 |
FUS WILD-TYPE | 58 | 46 | 61 |
P value = 0.839 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
FUS MUTATED | 1 | 1 | 0 | 0 | 1 | 0 | 0 |
FUS WILD-TYPE | 19 | 26 | 23 | 20 | 30 | 31 | 16 |
P value = 0.201 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
TP53 MUTATED | 1 | 6 | 0 |
TP53 WILD-TYPE | 60 | 79 | 22 |
P value = 0.0507 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
TP53 MUTATED | 3 | 3 | 0 |
TP53 WILD-TYPE | 39 | 44 | 64 |
P value = 0.353 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
TP53 MUTATED | 2 | 4 | 0 | 1 |
TP53 WILD-TYPE | 35 | 57 | 44 | 25 |
P value = 0.178 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
TP53 MUTATED | 3 | 4 | 0 |
TP53 WILD-TYPE | 61 | 50 | 50 |
P value = 0.707 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
TP53 MUTATED | 3 | 1 | 3 |
TP53 WILD-TYPE | 53 | 49 | 59 |
P value = 0.291 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
TP53 MUTATED | 3 | 0 | 4 |
TP53 WILD-TYPE | 78 | 30 | 53 |
P value = 0.792 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
TP53 MUTATED | 3 | 1 | 3 |
TP53 WILD-TYPE | 57 | 45 | 59 |
P value = 0.161 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
TP53 MUTATED | 1 | 1 | 0 | 0 | 1 | 1 | 3 |
TP53 WILD-TYPE | 19 | 26 | 23 | 20 | 30 | 30 | 13 |
P value = 0.35 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
ACADL MUTATED | 3 | 1 | 0 |
ACADL WILD-TYPE | 58 | 84 | 22 |
P value = 0.48 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
ACADL MUTATED | 0 | 2 | 1 |
ACADL WILD-TYPE | 42 | 45 | 63 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
ACADL MUTATED | 1 | 2 | 1 | 0 |
ACADL WILD-TYPE | 36 | 59 | 43 | 26 |
P value = 0.463 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
ACADL MUTATED | 2 | 0 | 2 |
ACADL WILD-TYPE | 62 | 54 | 48 |
P value = 0.0181 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
ACADL MUTATED | 4 | 0 | 0 |
ACADL WILD-TYPE | 52 | 50 | 62 |
P value = 0.394 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
ACADL MUTATED | 3 | 1 | 0 |
ACADL WILD-TYPE | 78 | 29 | 57 |
P value = 0.146 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
ACADL MUTATED | 3 | 1 | 0 |
ACADL WILD-TYPE | 57 | 45 | 62 |
P value = 0.352 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
ACADL MUTATED | 0 | 2 | 0 | 0 | 0 | 2 | 0 |
ACADL WILD-TYPE | 20 | 25 | 23 | 20 | 31 | 29 | 16 |
P value = 0.435 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
AHNAK2 MUTATED | 2 | 6 | 2 |
AHNAK2 WILD-TYPE | 59 | 79 | 20 |
P value = 0.317 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
AHNAK2 MUTATED | 4 | 1 | 4 |
AHNAK2 WILD-TYPE | 38 | 46 | 60 |
P value = 0.0217 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
AHNAK2 MUTATED | 2 | 1 | 2 | 5 |
AHNAK2 WILD-TYPE | 35 | 60 | 42 | 21 |
P value = 0.249 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
AHNAK2 MUTATED | 6 | 3 | 1 |
AHNAK2 WILD-TYPE | 58 | 51 | 49 |
P value = 0.229 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
AHNAK2 MUTATED | 6 | 2 | 2 |
AHNAK2 WILD-TYPE | 50 | 48 | 60 |
P value = 0.104 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
AHNAK2 MUTATED | 8 | 0 | 2 |
AHNAK2 WILD-TYPE | 73 | 30 | 55 |
P value = 0.715 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
AHNAK2 MUTATED | 5 | 2 | 3 |
AHNAK2 WILD-TYPE | 55 | 44 | 59 |
P value = 0.0327 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
AHNAK2 MUTATED | 4 | 1 | 0 | 2 | 0 | 3 | 0 |
AHNAK2 WILD-TYPE | 16 | 26 | 23 | 18 | 31 | 28 | 16 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
SMARCB1 MUTATED | 2 | 3 | 0 |
SMARCB1 WILD-TYPE | 59 | 82 | 22 |
P value = 0.0606 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
SMARCB1 MUTATED | 0 | 4 | 1 |
SMARCB1 WILD-TYPE | 42 | 43 | 63 |
P value = 0.316 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
SMARCB1 MUTATED | 0 | 4 | 1 | 0 |
SMARCB1 WILD-TYPE | 37 | 57 | 43 | 26 |
P value = 0.322 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
SMARCB1 MUTATED | 3 | 0 | 2 |
SMARCB1 WILD-TYPE | 61 | 54 | 48 |
P value = 0.012 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
SMARCB1 MUTATED | 0 | 0 | 5 |
SMARCB1 WILD-TYPE | 56 | 50 | 57 |
P value = 0.493 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
SMARCB1 MUTATED | 2 | 0 | 3 |
SMARCB1 WILD-TYPE | 79 | 30 | 54 |
P value = 0.0122 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
SMARCB1 MUTATED | 0 | 0 | 5 |
SMARCB1 WILD-TYPE | 60 | 46 | 57 |
P value = 0.918 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
SMARCB1 MUTATED | 0 | 1 | 0 | 1 | 2 | 1 | 0 |
SMARCB1 WILD-TYPE | 20 | 26 | 23 | 19 | 29 | 30 | 16 |
P value = 0.607 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
TEKT1 MUTATED | 1 | 2 | 1 |
TEKT1 WILD-TYPE | 60 | 83 | 21 |
P value = 0.686 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
TEKT1 MUTATED | 2 | 1 | 1 |
TEKT1 WILD-TYPE | 40 | 46 | 63 |
P value = 0.906 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
TEKT1 MUTATED | 1 | 1 | 1 | 1 |
TEKT1 WILD-TYPE | 36 | 60 | 43 | 25 |
P value = 0.831 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
TEKT1 MUTATED | 1 | 2 | 1 |
TEKT1 WILD-TYPE | 63 | 52 | 49 |
P value = 0.463 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
TEKT1 MUTATED | 0 | 2 | 2 |
TEKT1 WILD-TYPE | 56 | 48 | 60 |
P value = 0.514 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
TEKT1 MUTATED | 1 | 1 | 2 |
TEKT1 WILD-TYPE | 80 | 29 | 55 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
TEKT1 MUTATED | 1 | 1 | 2 |
TEKT1 WILD-TYPE | 59 | 45 | 60 |
P value = 0.362 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
TEKT1 MUTATED | 0 | 0 | 1 | 0 | 2 | 0 | 1 |
TEKT1 WILD-TYPE | 20 | 27 | 22 | 20 | 29 | 31 | 15 |
P value = 0.0773 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MKL1 MUTATED | 1 | 8 | 0 |
MKL1 WILD-TYPE | 60 | 77 | 22 |
P value = 0.717 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MKL1 MUTATED | 2 | 3 | 2 |
MKL1 WILD-TYPE | 40 | 44 | 62 |
P value = 0.142 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MKL1 MUTATED | 2 | 4 | 0 | 3 |
MKL1 WILD-TYPE | 35 | 57 | 44 | 23 |
P value = 0.472 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MKL1 MUTATED | 4 | 4 | 1 |
MKL1 WILD-TYPE | 60 | 50 | 49 |
P value = 0.913 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MKL1 MUTATED | 3 | 2 | 4 |
MKL1 WILD-TYPE | 53 | 48 | 58 |
P value = 0.278 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MKL1 MUTATED | 4 | 0 | 5 |
MKL1 WILD-TYPE | 77 | 30 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MKL1 MUTATED | 3 | 2 | 4 |
MKL1 WILD-TYPE | 57 | 44 | 58 |
P value = 0.996 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MKL1 MUTATED | 1 | 2 | 1 | 1 | 2 | 1 | 1 |
MKL1 WILD-TYPE | 19 | 25 | 22 | 19 | 29 | 30 | 15 |
P value = 0.606 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MYH7 MUTATED | 3 | 2 | 1 |
MYH7 WILD-TYPE | 58 | 83 | 21 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MYH7 MUTATED | 1 | 2 | 2 |
MYH7 WILD-TYPE | 41 | 45 | 62 |
P value = 0.376 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MYH7 MUTATED | 3 | 1 | 1 | 1 |
MYH7 WILD-TYPE | 34 | 60 | 43 | 25 |
P value = 0.383 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MYH7 MUTATED | 4 | 1 | 1 |
MYH7 WILD-TYPE | 60 | 53 | 49 |
P value = 0.774 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MYH7 MUTATED | 3 | 1 | 2 |
MYH7 WILD-TYPE | 53 | 49 | 60 |
P value = 0.0372 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MYH7 MUTATED | 6 | 0 | 0 |
MYH7 WILD-TYPE | 75 | 30 | 57 |
P value = 0.88 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MYH7 MUTATED | 2 | 1 | 3 |
MYH7 WILD-TYPE | 58 | 45 | 59 |
P value = 0.251 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MYH7 MUTATED | 2 | 2 | 0 | 0 | 0 | 2 | 0 |
MYH7 WILD-TYPE | 18 | 25 | 23 | 20 | 31 | 29 | 16 |
P value = 0.827 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
MAP4K3 MUTATED | 2 | 2 | 1 |
MAP4K3 WILD-TYPE | 59 | 83 | 21 |
P value = 0.379 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
MAP4K3 MUTATED | 1 | 0 | 3 |
MAP4K3 WILD-TYPE | 41 | 47 | 61 |
P value = 0.274 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
MAP4K3 MUTATED | 0 | 1 | 3 | 1 |
MAP4K3 WILD-TYPE | 37 | 60 | 41 | 25 |
P value = 0.228 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
MAP4K3 MUTATED | 2 | 0 | 3 |
MAP4K3 WILD-TYPE | 62 | 54 | 47 |
P value = 0.133 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
MAP4K3 MUTATED | 2 | 3 | 0 |
MAP4K3 WILD-TYPE | 54 | 47 | 62 |
P value = 0.203 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
MAP4K3 MUTATED | 4 | 1 | 0 |
MAP4K3 WILD-TYPE | 77 | 29 | 57 |
P value = 0.104 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
MAP4K3 MUTATED | 2 | 3 | 0 |
MAP4K3 WILD-TYPE | 58 | 43 | 62 |
P value = 0.759 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
MAP4K3 MUTATED | 1 | 1 | 1 | 0 | 0 | 2 | 0 |
MAP4K3 WILD-TYPE | 19 | 26 | 22 | 20 | 31 | 29 | 16 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 61 | 85 | 22 |
NEK2 MUTATED | 1 | 2 | 0 |
NEK2 WILD-TYPE | 60 | 83 | 22 |
P value = 0.784 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 42 | 47 | 64 |
NEK2 MUTATED | 0 | 1 | 2 |
NEK2 WILD-TYPE | 42 | 46 | 62 |
P value = 0.515 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 37 | 61 | 44 | 26 |
NEK2 MUTATED | 0 | 1 | 2 | 0 |
NEK2 WILD-TYPE | 37 | 60 | 42 | 26 |
P value = 0.196 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 64 | 54 | 50 |
NEK2 MUTATED | 0 | 1 | 2 |
NEK2 WILD-TYPE | 64 | 53 | 48 |
P value = 0.296 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 56 | 50 | 62 |
NEK2 MUTATED | 0 | 2 | 1 |
NEK2 WILD-TYPE | 56 | 48 | 61 |
P value = 0.182 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 81 | 30 | 57 |
NEK2 MUTATED | 0 | 1 | 2 |
NEK2 WILD-TYPE | 81 | 29 | 55 |
P value = 0.273 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 60 | 46 | 62 |
NEK2 MUTATED | 0 | 2 | 1 |
NEK2 WILD-TYPE | 60 | 44 | 61 |
P value = 0.696 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 20 | 27 | 23 | 20 | 31 | 31 | 16 |
NEK2 MUTATED | 0 | 0 | 1 | 1 | 1 | 0 | 0 |
NEK2 WILD-TYPE | 20 | 27 | 22 | 19 | 30 | 31 | 16 |
-
Mutation data file = transformed.cor.cli.txt
-
Molecular subtypes file = KIRP-TP.transferedmergedcluster.txt
-
Number of patients = 168
-
Number of significantly mutated genes = 28
-
Number of Molecular subtypes = 8
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.