name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-BC-4073-01B-02D-A12Z-10	404	393	11	276	2.722772e-02	0	coding only	34834024	107	253	3.071709e-06	7.263014e-06
TCGA-BC-A10Q-01A-11D-A12Z-10	508	498	10	342	1.968504e-02	0	coding only	34834024	143	317	4.105182e-06	9.100298e-06
TCGA-BC-A10R-01A-11D-A12Z-10	672	662	10	474	1.488095e-02	0	coding only	34834024	180	440	5.167362e-06	1.263133e-05
TCGA-BC-A10S-01A-22D-A12Z-10	6009	5841	168	2895	2.795806e-02	0	coding only	34834024	2766	2672	7.940512e-05	7.670661e-05
TCGA-BC-A10T-01A-11D-A12Z-10	368	359	9	256	2.445652e-02	0	coding only	34834024	96	234	2.755926e-06	6.717570e-06
TCGA-BC-A10U-01A-11D-A12Z-10	280	267	13	215	4.642857e-02	1	exome+100bp flanks	34834024	46	203	1.320548e-06	5.827636e-06
TCGA-BC-A10W-01A-11D-A12Z-10	783	766	17	551	2.171137e-02	0	coding only	34834024	201	522	5.770221e-06	1.498535e-05
TCGA-BC-A10X-01A-11D-A12Z-10	196	190	6	122	3.061224e-02	1	exome+100bp flanks	34834024	64	112	1.837284e-06	3.215247e-06
TCGA-BC-A10Y-01A-11D-A12Z-10	627	611	16	425	2.551834e-02	0	coding only	34834024	175	401	5.023824e-06	1.151173e-05
TCGA-BC-A10Z-01A-11D-A12Z-10	404	387	17	298	4.207921e-02	1	exome+100bp flanks	34834024	86	285	2.468851e-06	8.181656e-06
TCGA-BC-A110-01A-11D-A12Z-10	509	497	12	302	2.357564e-02	0	coding only	34834024	188	289	5.397022e-06	8.296486e-06
TCGA-BC-A112-01A-11D-A12Z-10	622	598	24	483	3.858521e-02	1	exome+100bp flanks	34834024	108	443	3.100417e-06	1.271745e-05
TCGA-BC-A216-01A-11D-A152-10	310	301	9	211	2.903226e-02	0	coding only	34834024	78	198	2.239190e-06	5.684098e-06
TCGA-BC-A217-01A-11D-A152-10	298	288	10	207	3.355705e-02	1	exome+100bp flanks	34834024	77	193	2.210482e-06	5.540560e-06
TCGA-BC-A3KF-01A-11D-A20W-10	472	468	4	326	8.474576e-03	0	coding only	34834024	133	311	3.818106e-06	8.928053e-06
TCGA-BC-A3KG-01A-11D-A20W-10	358	346	12	268	3.351955e-02	1	exome+100bp flanks	34834024	72	248	2.066945e-06	7.119476e-06
TCGA-BC-A5W4-01A-11D-A28X-10	140	134	6	96	4.285714e-02	1	exome+100bp flanks	34834024	36	91	1.033472e-06	2.612388e-06
TCGA-BC-A69H-01A-11D-A30V-10	186	180	6	130	3.225806e-02	1	exome+100bp flanks	34834024	46	119	1.320548e-06	3.416200e-06
TCGA-BC-A69I-01A-11D-A30V-10	1435	1386	49	673	3.414634e-02	1	exome+100bp flanks	34834024	671	621	1.926278e-05	1.782740e-05
TCGA-BD-A2L6-01A-11D-A20W-10	191	183	8	141	4.188482e-02	1	exome+100bp flanks	34834024	41	136	1.177010e-06	3.904229e-06
TCGA-BD-A3EP-01A-11D-A22F-10	385	381	4	289	1.038961e-02	0	coding only	34834024	82	267	2.354020e-06	7.664920e-06
TCGA-BD-A3ER-01A-11D-A20W-10	212	206	6	142	2.830189e-02	0	coding only	34834024	60	129	1.722454e-06	3.703276e-06
TCGA-BW-A5NO-01A-11D-A27I-10	247	242	5	162	2.024291e-02	0	coding only	34834024	72	151	2.066945e-06	4.334842e-06
TCGA-BW-A5NP-01A-11D-A27I-10	135	134	1	95	7.407407e-03	0	coding only	34834024	37	89	1.062180e-06	2.554973e-06
TCGA-BW-A5NQ-01A-11D-A27I-10	155	152	3	108	1.935484e-02	0	coding only	34834024	36	98	1.033472e-06	2.813341e-06
TCGA-CC-5258-01A-01D-A12Z-10	646	636	10	462	1.547988e-02	0	coding only	34834024	169	425	4.851578e-06	1.220072e-05
TCGA-CC-5259-01A-31D-A20W-10	257	248	9	195	3.501946e-02	1	exome+100bp flanks	34834024	47	178	1.349256e-06	5.109947e-06
TCGA-CC-5260-01A-01D-A12Z-10	499	489	10	332	2.004008e-02	0	coding only	34834024	148	315	4.248720e-06	9.042883e-06
TCGA-CC-5261-01A-01D-A12Z-10	1246	1213	33	668	2.648475e-02	0	coding only	34834024	508	613	1.458344e-05	1.759774e-05
TCGA-CC-5262-01A-01D-A12Z-10	391	384	7	281	1.790281e-02	0	coding only	34834024	99	250	2.842049e-06	7.176891e-06
TCGA-CC-5263-01A-01D-A12Z-10	544	528	16	360	2.941176e-02	0	coding only	34834024	155	334	4.449673e-06	9.588327e-06
TCGA-CC-5264-01A-01D-A12Z-10	765	749	16	520	2.091503e-02	0	coding only	34834024	219	482	6.286957e-06	1.383705e-05
TCGA-CC-A123-01A-11D-A12Z-10	538	522	16	361	2.973978e-02	0	coding only	34834024	152	332	4.363550e-06	9.530912e-06
TCGA-CC-A1HT-01A-11D-A12Z-10	806	791	15	550	1.861042e-02	0	coding only	34834024	223	511	6.401787e-06	1.466957e-05
TCGA-CC-A3M9-01A-11D-A20W-10	340	332	8	223	2.352941e-02	0	coding only	34834024	100	211	2.870756e-06	6.057296e-06
TCGA-CC-A3MA-01A-11D-A20W-10	469	465	4	328	8.528785e-03	0	coding only	34834024	134	306	3.846814e-06	8.784515e-06
TCGA-CC-A3MB-01A-11D-A20W-10	510	500	10	361	1.960784e-02	0	coding only	34834024	133	336	3.818106e-06	9.645742e-06
TCGA-CC-A3MC-01A-11D-A22F-10	218	210	8	156	3.669725e-02	1	exome+100bp flanks	34834024	50	152	1.435378e-06	4.363550e-06
TCGA-CC-A5UC-01A-11D-A28X-10	122	122	0	75	0	0	coding only	34834024	43	72	1.234425e-06	2.066945e-06
TCGA-CC-A5UD-01A-11D-A28X-10	290	282	8	207	2.758621e-02	0	coding only	34834024	71	192	2.038237e-06	5.511852e-06
TCGA-CC-A5UE-01A-11D-A28X-10	187	180	7	137	3.743316e-02	1	exome+100bp flanks	34834024	40	131	1.148303e-06	3.760691e-06
TCGA-CC-A7IF-01A-11D-A33K-10	185	175	10	135	5.405405e-02	1	exome+100bp flanks	34834024	39	128	1.119595e-06	3.674568e-06
TCGA-CC-A7IG-01A-11D-A33K-10	206	199	7	148	3.398058e-02	1	exome+100bp flanks	34834024	48	139	1.377963e-06	3.990352e-06
TCGA-CC-A7IH-01A-11D-A33K-10	1025	986	39	730	3.804878e-02	1	exome+100bp flanks	34834024	240	683	6.889816e-06	1.960727e-05
TCGA-CC-A7II-01A-11D-A33K-10	233	221	12	162	5.150215e-02	1	exome+100bp flanks	34834024	57	152	1.636331e-06	4.363550e-06
TCGA-CC-A7IJ-01A-11D-A33Q-10	207	201	6	150	2.898551e-02	0	coding only	34834024	46	140	1.320548e-06	4.019059e-06
TCGA-CC-A7IK-01A-12D-A33Q-10	410	399	11	316	2.682927e-02	0	coding only	34834024	79	298	2.267898e-06	8.554854e-06
TCGA-CC-A7IL-01A-11D-A33Q-10	166	157	9	117	5.421687e-02	1	exome+100bp flanks	34834024	39	108	1.119595e-06	3.100417e-06
TCGA-DD-A113-01A-11D-A12Z-10	560	536	24	385	4.285714e-02	1	exome+100bp flanks	34834024	142	363	4.076474e-06	1.042085e-05
TCGA-DD-A114-01A-11D-A12Z-10	377	365	12	270	3.183024e-02	1	exome+100bp flanks	34834024	87	249	2.497558e-06	7.148184e-06
TCGA-DD-A115-01A-11D-A12Z-10	299	294	5	209	1.672241e-02	0	coding only	34834024	78	200	2.239190e-06	5.741513e-06
TCGA-DD-A116-01A-11D-A12Z-10	814	779	35	564	4.299754e-02	1	exome+100bp flanks	34834024	197	531	5.655390e-06	1.524372e-05
TCGA-DD-A118-01A-11D-A12Z-10	562	549	13	391	2.313167e-02	0	coding only	34834024	144	373	4.133889e-06	1.070792e-05
TCGA-DD-A119-01A-11D-A12Z-10	948	939	9	655	9.493671e-03	0	coding only	34834024	265	604	7.607505e-06	1.733937e-05
TCGA-DD-A11A-01A-11D-A12Z-10	1141	1106	35	714	3.067485e-02	1	exome+100bp flanks	34834024	356	672	1.021989e-05	1.929148e-05
TCGA-DD-A11B-01A-11D-A16Z-10	285	276	9	199	3.157895e-02	1	exome+100bp flanks	34834024	76	184	2.181775e-06	5.282192e-06
TCGA-DD-A11C-01A-11D-A12Z-10	1192	1177	15	806	1.258389e-02	0	coding only	34834024	350	760	1.004765e-05	2.181775e-05
TCGA-DD-A11D-01A-11D-A12Z-10	574	563	11	391	1.916376e-02	0	coding only	34834024	156	368	4.478380e-06	1.056438e-05
TCGA-DD-A1E9-01A-21D-A152-10	207	202	5	135	2.415459e-02	0	coding only	34834024	60	121	1.722454e-06	3.473615e-06
TCGA-DD-A1EA-01A-11D-A12Z-10	587	571	16	403	2.725724e-02	0	coding only	34834024	159	378	4.564503e-06	1.085146e-05
TCGA-DD-A1EB-01A-11D-A12Z-10	712	681	31	449	4.353933e-02	1	exome+100bp flanks	34834024	215	412	6.172126e-06	1.182752e-05
TCGA-DD-A1EC-01A-21D-A12Z-10	277	269	8	178	2.888087e-02	0	coding only	34834024	84	168	2.411435e-06	4.822871e-06
TCGA-DD-A1ED-01A-11D-A152-10	6634	6555	79	3151	1.190835e-02	0	coding only	34834024	3219	2898	9.240965e-05	8.319452e-05
TCGA-DD-A1EF-01A-11D-A12Z-10	669	644	25	455	3.736921e-02	1	exome+100bp flanks	34834024	171	422	4.908994e-06	1.211459e-05
TCGA-DD-A1EG-01A-11D-A20W-10	1280	1244	36	1153	2.812500e-02	0	coding only	34834024	81	1066	2.325313e-06	3.060226e-05
TCGA-DD-A1EH-01A-11D-A12Z-10	460	441	19	318	4.130435e-02	1	exome+100bp flanks	34834024	116	295	3.330078e-06	8.468732e-06
TCGA-DD-A1EI-01A-11D-A12Z-10	379	374	5	262	1.319261e-02	0	coding only	34834024	107	240	3.071709e-06	6.889816e-06
TCGA-DD-A1EJ-01A-11D-A152-10	299	286	13	206	4.347826e-02	1	exome+100bp flanks	34834024	72	194	2.066945e-06	5.569268e-06
TCGA-DD-A1EK-01A-11D-A20W-10	238	233	5	169	2.100840e-02	0	coding only	34834024	56	157	1.607624e-06	4.507088e-06
TCGA-DD-A1EL-01A-11D-A152-10	1179	1153	26	795	2.205259e-02	0	coding only	34834024	337	733	9.674449e-06	2.104264e-05
TCGA-DD-A39V-01A-11D-A20W-10	270	265	5	177	1.851852e-02	0	coding only	34834024	82	168	2.354020e-06	4.822871e-06
TCGA-DD-A39W-01A-11D-A20W-10	198	196	2	143	1.010101e-02	0	coding only	34834024	51	132	1.464086e-06	3.789399e-06
TCGA-DD-A39X-01A-11D-A20W-10	480	479	1	339	2.083333e-03	0	coding only	34834024	127	326	3.645861e-06	9.358666e-06
TCGA-DD-A39Y-01A-11D-A20W-10	1625	1589	36	1423	2.215385e-02	0	coding only	34834024	153	1320	4.392257e-06	3.789399e-05
TCGA-DD-A39Z-01A-11D-A20W-10	499	497	2	352	4.008016e-03	0	coding only	34834024	133	328	3.818106e-06	9.416081e-06
TCGA-DD-A3A0-01A-11D-A20W-10	1751	1712	39	1505	2.227299e-02	0	coding only	34834024	195	1405	5.597975e-06	4.033413e-05
TCGA-DD-A3A1-01A-11D-A20W-10	329	322	7	244	2.127660e-02	0	coding only	34834024	75	227	2.153067e-06	6.516617e-06
TCGA-DD-A3A2-01A-11D-A20W-10	242	234	8	170	3.305785e-02	1	exome+100bp flanks	34834024	60	158	1.722454e-06	4.535795e-06
TCGA-DD-A3A3-01A-11D-A22F-10	177	172	5	123	2.824859e-02	0	coding only	34834024	47	112	1.349256e-06	3.215247e-06
TCGA-DD-A3A4-01A-11D-A22F-10	181	180	1	132	5.524862e-03	0	coding only	34834024	46	124	1.320548e-06	3.559738e-06
TCGA-DD-A3A5-01A-11D-A22F-10	191	183	8	134	4.188482e-02	1	exome+100bp flanks	34834024	43	124	1.234425e-06	3.559738e-06
TCGA-DD-A3A6-01A-11D-A22F-10	139	136	3	98	2.158273e-02	0	coding only	34834024	32	93	9.186421e-07	2.669804e-06
TCGA-DD-A3A7-01A-11D-A22F-10	272	260	12	188	4.411765e-02	1	exome+100bp flanks	34834024	68	179	1.952114e-06	5.138654e-06
TCGA-DD-A3A8-01A-11D-A22F-10	292	278	14	195	4.794521e-02	1	exome+100bp flanks	34834024	78	184	2.239190e-06	5.282192e-06
TCGA-DD-A3A9-01A-11D-A25V-10	535	514	21	374	3.925234e-02	1	exome+100bp flanks	34834024	128	355	3.674568e-06	1.019119e-05
TCGA-DD-A4NA-01A-11D-A25V-10	62	61	1	42	1.612903e-02	0	coding only	34834024	18	36	5.167362e-07	1.033472e-06
TCGA-DD-A4NB-01A-12D-A25V-10	61	57	4	40	6.557377e-02	0	coding only	34834024	15	32	4.306135e-07	9.186421e-07
TCGA-DD-A4ND-01A-11D-A25V-10	92	88	4	61	4.347826e-02	0	coding only	34834024	25	58	7.176891e-07	1.665039e-06
TCGA-DD-A4NE-01A-11D-A27I-10	105	102	3	73	2.857143e-02	0	coding only	34834024	27	68	7.751042e-07	1.952114e-06
TCGA-DD-A4NF-01A-11D-A27I-10	189	184	5	135	2.645503e-02	0	coding only	34834024	44	128	1.263133e-06	3.674568e-06
TCGA-DD-A4NG-01A-11D-A27I-10	127	121	6	85	4.724409e-02	1	exome+100bp flanks	34834024	34	82	9.760572e-07	2.354020e-06
TCGA-DD-A4NH-01A-11D-A27I-10	93	90	3	64	3.225806e-02	0	coding only	34834024	26	56	7.463967e-07	1.607624e-06
TCGA-DD-A4NI-01A-11D-A27I-10	257	242	15	182	5.836576e-02	1	exome+100bp flanks	34834024	55	172	1.578916e-06	4.937701e-06
TCGA-DD-A4NJ-01A-11D-A27I-10	132	123	9	98	6.818182e-02	1	exome+100bp flanks	34834024	22	90	6.315664e-07	2.583681e-06
TCGA-DD-A4NK-01A-11D-A28X-10	149	141	8	93	5.369128e-02	1	exome+100bp flanks	34834024	46	87	1.320548e-06	2.497558e-06
TCGA-DD-A4NL-01A-11D-A28X-10	114	106	8	65	7.017544e-02	1	exome+100bp flanks	34834024	39	59	1.119595e-06	1.693746e-06
TCGA-DD-A4NN-01A-11D-A28X-10	117	112	5	79	4.273504e-02	1	exome+100bp flanks	34834024	29	75	8.325194e-07	2.153067e-06
TCGA-DD-A4NO-01A-11D-A28X-10	88	87	1	68	1.136364e-02	0	coding only	34834024	18	60	5.167362e-07	1.722454e-06
TCGA-DD-A4NP-01A-11D-A28X-10	88	84	4	51	4.545455e-02	0	coding only	34834024	28	46	8.038118e-07	1.320548e-06
TCGA-DD-A4NQ-01A-21D-A28X-10	165	159	6	105	3.636364e-02	1	exome+100bp flanks	34834024	49	98	1.406671e-06	2.813341e-06
TCGA-DD-A4NR-01A-11D-A30V-10	96	91	5	67	5.208333e-02	1	exome+100bp flanks	34834024	22	62	6.315664e-07	1.779869e-06
TCGA-DD-A4NS-01A-11D-A30V-10	112	108	4	83	3.571429e-02	0	coding only	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-DD-A4NV-01A-11D-A30V-10	232	226	6	175	2.586207e-02	0	coding only	34834024	46	167	1.320548e-06	4.794163e-06
TCGA-DD-A73A-01A-12D-A32G-10	149	144	5	104	3.355705e-02	1	exome+100bp flanks	34834024	40	96	1.148303e-06	2.755926e-06
TCGA-DD-A73B-01A-12D-A32G-10	112	106	6	79	5.357143e-02	1	exome+100bp flanks	34834024	24	79	6.889816e-07	2.267898e-06
TCGA-DD-A73C-01A-12D-A33K-10	122	122	0	89	0	0	coding only	34834024	32	84	9.186421e-07	2.411435e-06
TCGA-DD-A73D-01A-12D-A32G-10	107	102	5	81	4.672897e-02	1	exome+100bp flanks	34834024	20	74	5.741513e-07	2.124360e-06
TCGA-DD-A73E-01A-12D-A32G-10	259	247	12	188	4.633205e-02	1	exome+100bp flanks	34834024	58	181	1.665039e-06	5.196069e-06
TCGA-DD-A73F-01A-11D-A32G-10	209	202	7	141	3.349282e-02	1	exome+100bp flanks	34834024	57	134	1.636331e-06	3.846814e-06
TCGA-DD-A73G-01A-22D-A32G-10	164	163	1	115	6.097561e-03	0	coding only	34834024	43	107	1.234425e-06	3.071709e-06
TCGA-ED-A459-01A-11D-A25V-10	331	324	7	251	2.114804e-02	0	coding only	34834024	70	240	2.009530e-06	6.889816e-06
TCGA-ED-A4XI-01A-11D-A25V-10	254	248	6	192	2.362205e-02	0	coding only	34834024	54	175	1.550208e-06	5.023824e-06
TCGA-ED-A5KG-01A-11D-A27I-10	79	75	4	43	5.063291e-02	0	coding only	34834024	28	40	8.038118e-07	1.148303e-06
TCGA-ED-A627-01A-12D-A30V-10	53	50	3	34	5.660377e-02	0	coding only	34834024	13	31	3.731983e-07	8.899345e-07
TCGA-ED-A66X-01A-11D-A30V-10	103	98	5	74	4.854369e-02	1	exome+100bp flanks	34834024	23	66	6.602740e-07	1.894699e-06
TCGA-ED-A66Y-01A-11D-A30V-10	135	132	3	104	2.222222e-02	0	coding only	34834024	24	100	6.889816e-07	2.870756e-06
TCGA-ED-A7PX-01A-51D-A34Z-10	58	55	3	46	5.172414e-02	0	coding only	34834024	7	40	2.009530e-07	1.148303e-06
TCGA-ED-A7PY-01A-11D-A33Q-10	63	58	5	45	7.936508e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-ED-A7PZ-01A-11D-A33Q-10	328	318	10	253	3.048780e-02	1	exome+100bp flanks	34834024	64	245	1.837284e-06	7.033353e-06
TCGA-ED-A7XO-01A-11D-A34Z-10	92	89	3	69	3.260870e-02	0	coding only	34834024	17	64	4.880286e-07	1.837284e-06
TCGA-ED-A7XP-01A-11D-A34Z-10	107	105	2	77	1.869159e-02	0	coding only	34834024	26	73	7.463967e-07	2.095652e-06
TCGA-ED-A82E-01A-11D-A34Z-10	60	59	1	43	1.666667e-02	0	coding only	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-EP-A12J-01A-11D-A12Z-10	454	427	27	288	5.947137e-02	1	exome+100bp flanks	34834024	128	258	3.674568e-06	7.406552e-06
TCGA-EP-A26S-01A-11D-A16V-10	794	777	17	528	2.141058e-02	0	coding only	34834024	236	497	6.774985e-06	1.426766e-05
TCGA-EP-A2KA-01A-11D-A183-10	1432	1410	22	975	1.536313e-02	0	coding only	34834024	415	904	1.191364e-05	2.595164e-05
TCGA-EP-A2KB-01A-11D-A183-10	1060	1053	7	722	6.603774e-03	0	coding only	34834024	303	670	8.698392e-06	1.923407e-05
TCGA-EP-A2KC-01A-11D-A20W-10	196	190	6	125	3.061224e-02	1	exome+100bp flanks	34834024	59	117	1.693746e-06	3.358785e-06
TCGA-EP-A3JL-01A-11D-A20W-10	244	242	2	176	8.196721e-03	0	coding only	34834024	63	166	1.808577e-06	4.765456e-06
TCGA-EP-A3RK-01A-11D-A22F-10	155	148	7	110	4.516129e-02	1	exome+100bp flanks	34834024	35	106	1.004765e-06	3.043002e-06
TCGA-ES-A2HS-01A-11D-A183-10	1141	1131	10	795	8.764242e-03	0	coding only	34834024	309	753	8.870638e-06	2.161680e-05
TCGA-ES-A2HT-01A-12D-A183-10	1163	1153	10	815	8.598452e-03	0	coding only	34834024	320	764	9.186421e-06	2.193258e-05
TCGA-FV-A23B-01A-11D-A16V-10	2023	1995	28	1426	1.384083e-02	0	coding only	34834024	533	1337	1.530113e-05	3.838201e-05
TCGA-FV-A2QQ-01A-11D-A22F-10	284	270	14	204	4.929577e-02	1	exome+100bp flanks	34834024	65	193	1.865992e-06	5.540560e-06
TCGA-FV-A2QR-01A-11D-A20W-10	573	563	10	411	1.745201e-02	0	coding only	34834024	140	383	4.019059e-06	1.099500e-05
TCGA-FV-A3I0-01A-11D-A22F-10	204	198	6	146	2.941176e-02	0	coding only	34834024	48	138	1.377963e-06	3.961644e-06
TCGA-FV-A3I1-01A-11D-A22F-10	125	119	6	85	4.800000e-02	1	exome+100bp flanks	34834024	31	78	8.899345e-07	2.239190e-06
TCGA-FV-A3R2-01A-11D-A22F-10	191	184	7	127	3.664921e-02	1	exome+100bp flanks	34834024	54	122	1.550208e-06	3.502323e-06
TCGA-FV-A3R3-01A-11D-A22F-10	202	197	5	145	2.475248e-02	0	coding only	34834024	46	136	1.320548e-06	3.904229e-06
TCGA-FV-A495-01A-11D-A25V-10	180	169	11	124	6.111111e-02	1	exome+100bp flanks	34834024	43	111	1.234425e-06	3.186540e-06
TCGA-FV-A496-01A-11D-A25V-10	195	192	3	147	1.538462e-02	0	coding only	34834024	44	139	1.263133e-06	3.990352e-06
TCGA-FV-A4ZP-01A-12D-A25V-10	167	165	2	120	1.197605e-02	0	coding only	34834024	39	112	1.119595e-06	3.215247e-06
TCGA-FV-A4ZQ-01A-11D-A25V-10	132	128	4	92	3.030303e-02	0	coding only	34834024	35	89	1.004765e-06	2.554973e-06
TCGA-G3-A25S-01A-11D-A16V-10	1959	1933	26	1352	1.327208e-02	0	coding only	34834024	554	1278	1.590399e-05	3.668827e-05
TCGA-G3-A25T-01A-11D-A16V-10	1634	1618	16	1151	9.791922e-03	0	coding only	34834024	437	1072	1.254521e-05	3.077451e-05
TCGA-G3-A25U-01A-11D-A16V-10	1997	1975	22	1422	1.101652e-02	0	coding only	34834024	514	1335	1.475569e-05	3.832460e-05
TCGA-G3-A25V-01A-11D-A16V-10	1140	1124	16	782	1.403509e-02	0	coding only	34834024	325	749	9.329959e-06	2.150197e-05
TCGA-G3-A25W-01A-11D-A16V-10	1495	1474	21	1036	1.404682e-02	0	coding only	34834024	407	975	1.168398e-05	2.798988e-05
TCGA-G3-A25Y-01A-11D-A16V-10	1019	995	24	688	2.355250e-02	0	coding only	34834024	288	642	8.267779e-06	1.843026e-05
TCGA-G3-A25Z-01A-11D-A16V-10	747	731	16	488	2.141901e-02	0	coding only	34834024	224	443	6.430495e-06	1.271745e-05
TCGA-G3-A3CG-01A-11D-A20W-10	264	263	1	182	3.787879e-03	0	coding only	34834024	72	171	2.066945e-06	4.908994e-06
TCGA-G3-A3CH-01A-11D-A22F-10	176	169	7	118	3.977273e-02	1	exome+100bp flanks	34834024	44	111	1.263133e-06	3.186540e-06
TCGA-G3-A3CI-01A-11D-A20W-10	153	151	2	110	1.307190e-02	0	coding only	34834024	38	105	1.090887e-06	3.014294e-06
TCGA-G3-A3CJ-01A-11D-A20W-10	1677	1627	50	1528	2.981515e-02	0	coding only	34834024	88	1423	2.526266e-06	4.085086e-05
TCGA-G3-A3CK-01A-11D-A20W-10	440	432	8	315	1.818182e-02	0	coding only	34834024	109	295	3.129125e-06	8.468732e-06
TCGA-G3-A5SI-01A-31D-A27I-10	85	82	3	53	3.529412e-02	0	coding only	34834024	27	49	7.751042e-07	1.406671e-06
TCGA-G3-A5SJ-01A-11D-A27I-10	177	173	4	136	2.259887e-02	0	coding only	34834024	36	130	1.033472e-06	3.731983e-06
TCGA-G3-A5SK-01A-11D-A27I-10	161	152	9	112	5.590062e-02	1	exome+100bp flanks	34834024	37	105	1.062180e-06	3.014294e-06
TCGA-G3-A5SL-01A-11D-A27I-10	194	187	7	150	3.608247e-02	1	exome+100bp flanks	34834024	37	137	1.062180e-06	3.932936e-06
TCGA-G3-A5SM-01A-12D-A28X-10	190	180	10	123	5.263158e-02	1	exome+100bp flanks	34834024	52	115	1.492793e-06	3.301370e-06
TCGA-G3-A6UC-01A-21D-A33K-10	183	172	11	127	6.010929e-02	1	exome+100bp flanks	34834024	44	118	1.263133e-06	3.387493e-06
TCGA-G3-A7M5-01A-11D-A33Q-10	263	252	11	189	4.182510e-02	1	exome+100bp flanks	34834024	60	178	1.722454e-06	5.109947e-06
TCGA-G3-A7M6-01A-11D-A33Q-10	153	149	4	117	2.614379e-02	0	coding only	34834024	29	114	8.325194e-07	3.272662e-06
TCGA-G3-A7M7-01A-12D-A34Z-10	162	156	6	119	3.703704e-02	1	exome+100bp flanks	34834024	33	108	9.473496e-07	3.100417e-06
TCGA-G3-A7M8-01A-11D-A33Q-10	64	62	2	49	3.125000e-02	0	coding only	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-G3-A7M9-01A-23D-A34Z-10	234	231	3	173	1.282051e-02	0	coding only	34834024	53	164	1.521501e-06	4.708041e-06
TCGA-GJ-A6C0-01A-12D-A30V-10	129	125	4	96	3.100775e-02	0	coding only	34834024	24	90	6.889816e-07	2.583681e-06
TCGA-HP-A5MZ-01A-21D-A27I-10	96	93	3	62	3.125000e-02	0	coding only	34834024	29	58	8.325194e-07	1.665039e-06
TCGA-HP-A5N0-01A-11D-A28X-10	210	204	6	156	2.857143e-02	0	coding only	34834024	47	149	1.349256e-06	4.277427e-06
TCGA-K7-A5RF-01A-11D-A28X-10	130	126	4	79	3.076923e-02	0	coding only	34834024	41	75	1.177010e-06	2.153067e-06
TCGA-K7-A5RG-01A-11D-A28X-10	212	201	11	155	5.188679e-02	1	exome+100bp flanks	34834024	43	143	1.234425e-06	4.105182e-06
TCGA-K7-A6G5-01A-11D-A30V-10	144	137	7	88	4.861111e-02	1	exome+100bp flanks	34834024	46	82	1.320548e-06	2.354020e-06
TCGA-KR-A7K0-01A-12D-A33Q-10	133	131	2	95	1.503759e-02	0	coding only	34834024	35	88	1.004765e-06	2.526266e-06
TCGA-KR-A7K2-01A-12D-A33Q-10	95	92	3	56	3.157895e-02	0	coding only	34834024	36	51	1.033472e-06	1.464086e-06
TCGA-KR-A7K7-01A-11D-A33K-10	101	97	4	73	3.960396e-02	0	coding only	34834024	22	71	6.315664e-07	2.038237e-06
TCGA-KR-A7K8-01A-11D-A33K-10	92	87	5	64	5.434783e-02	1	exome+100bp flanks	34834024	23	62	6.602740e-07	1.779869e-06
TCGA-LG-A6GG-01A-11D-A30V-10	279	269	10	202	3.584229e-02	1	exome+100bp flanks	34834024	64	188	1.837284e-06	5.397022e-06
TCGA-MI-A75C-01A-11D-A32G-10	175	167	8	129	4.571429e-02	1	exome+100bp flanks	34834024	35	122	1.004765e-06	3.502323e-06
TCGA-MI-A75E-01A-11D-A32G-10	175	172	3	127	1.714286e-02	0	coding only	34834024	40	113	1.148303e-06	3.243955e-06
TCGA-MI-A75G-01A-11D-A32G-10	322	317	5	256	1.552795e-02	0	coding only	34834024	55	236	1.578916e-06	6.774985e-06
TCGA-MI-A75H-01A-11D-A32G-10	190	180	10	131	5.263158e-02	1	exome+100bp flanks	34834024	45	121	1.291840e-06	3.473615e-06
TCGA-MI-A75I-01A-11D-A32G-10	254	243	11	183	4.330709e-02	1	exome+100bp flanks	34834024	58	175	1.665039e-06	5.023824e-06
TCGA-MR-A520-01A-11D-A25V-10	65	62	3	39	4.615385e-02	0	coding only	34834024	22	35	6.315664e-07	1.004765e-06
TCGA-NI-A4U2-01A-11D-A28X-10	201	196	5	148	2.487562e-02	0	coding only	34834024	45	142	1.291840e-06	4.076474e-06
TCGA-O8-A75V-01A-11D-A32G-10	123	116	7	75	5.691057e-02	1	exome+100bp flanks	34834024	39	65	1.119595e-06	1.865992e-06
TCGA-PD-A5DF-01A-11D-A27I-10	79	77	2	61	2.531646e-02	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-QA-A7B7-01A-11D-A32G-10	148	141	7	98	4.729730e-02	1	exome+100bp flanks	34834024	43	95	1.234425e-06	2.727219e-06
TCGA-RC-A6M3-01A-11D-A32G-10	134	129	5	99	3.731343e-02	1	exome+100bp flanks	34834024	26	90	7.463967e-07	2.583681e-06
TCGA-RC-A6M4-01A-11D-A32G-10	247	234	13	169	5.263158e-02	1	exome+100bp flanks	34834024	59	161	1.693746e-06	4.621918e-06
TCGA-RC-A6M5-01A-11D-A32G-10	62	58	4	46	6.451613e-02	0	coding only	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-RC-A6M6-01A-11D-A32G-10	256	246	10	199	3.906250e-02	1	exome+100bp flanks	34834024	44	189	1.263133e-06	5.425730e-06
TCGA-RC-A7S9-01A-11D-A33Q-10	88	86	2	66	2.272727e-02	0	coding only	34834024	19	63	5.454437e-07	1.808577e-06
TCGA-RC-A7SB-01A-21D-A34Z-10	117	116	1	85	8.547009e-03	0	coding only	34834024	30	78	8.612269e-07	2.239190e-06
TCGA-RC-A7SF-01A-11D-A34Z-10	130	128	2	94	1.538462e-02	0	coding only	34834024	31	87	8.899345e-07	2.497558e-06
TCGA-RC-A7SK-01A-11D-A34Z-10	213	207	6	157	2.816901e-02	0	coding only	34834024	47	144	1.349256e-06	4.133889e-06
TCGA-RG-A7D4-01A-12D-A33Q-10	147	138	9	96	6.122449e-02	1	exome+100bp flanks	34834024	38	89	1.090887e-06	2.554973e-06
TCGA-T1-A6J8-01A-11D-A32G-10	142	133	9	96	6.338028e-02	1	exome+100bp flanks	34834024	36	91	1.033472e-06	2.612388e-06
TCGA-UB-A7MA-01A-11D-A33Q-10	177	168	9	117	5.084746e-02	1	exome+100bp flanks	34834024	48	108	1.377963e-06	3.100417e-06
TCGA-UB-A7MB-01A-11D-A33Q-10	1865	1812	53	1354	2.841823e-02	0	coding only	34834024	428	1264	1.228684e-05	3.628636e-05
TCGA-UB-A7MC-01A-11D-A33Q-10	115	112	3	86	2.608696e-02	0	coding only	34834024	23	81	6.602740e-07	2.325313e-06
TCGA-UB-A7MD-01A-12D-A34Z-10	151	144	7	107	4.635762e-02	1	exome+100bp flanks	34834024	35	97	1.004765e-06	2.784634e-06
TCGA-UB-A7ME-01A-11D-A33K-10	146	141	5	99	3.424658e-02	1	exome+100bp flanks	34834024	40	92	1.148303e-06	2.641096e-06
TCGA-UB-A7MF-01A-11D-A33K-10	165	163	2	121	1.212121e-02	0	coding only	34834024	41	116	1.177010e-06	3.330078e-06