This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 80 arm-level events and 12 molecular subtypes across 493 patients, 203 significant findings detected with P value < 0.05 and Q value < 0.25.
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1p gain cnv correlated to 'CN_CNMF'.
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1q gain cnv correlated to 'MRNASEQ_CHIERARCHICAL' and 'MIRSEQ_CHIERARCHICAL'.
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2p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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2q gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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3p gain cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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3q gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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4p gain cnv correlated to 'CN_CNMF'.
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5p gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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5q gain cnv correlated to 'METHLYATION_CNMF'.
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6p gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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7p gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7q gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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8q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p gain cnv correlated to 'MRNASEQ_CNMF'.
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10p gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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10q gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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11p gain cnv correlated to 'CN_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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14q gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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15q gain cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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17p gain cnv correlated to 'CN_CNMF' and 'MIRSEQ_CNMF'.
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17q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18p gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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18q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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20p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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20q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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21q gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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1p loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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3p loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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4p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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4q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6q loss cnv correlated to 'METHLYATION_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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7p loss cnv correlated to 'CN_CNMF'.
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8p loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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8q loss cnv correlated to 'CN_CNMF'.
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9p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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9q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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10p loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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10q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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11p loss cnv correlated to 'CN_CNMF'.
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12q loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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13q loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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15q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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16p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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16q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17p loss cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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17q loss cnv correlated to 'CN_CNMF'.
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18p loss cnv correlated to 'CN_CNMF'.
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18q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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19p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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21q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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22q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
Clinical Features |
MRNA CNMF |
MRNA CHIERARCHICAL |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
12p gain | 131 (27%) | 362 |
0.222 (1.00) |
0.0471 (1.00) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.0157 (1.00) |
0.0083 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
12q gain | 126 (26%) | 367 |
0.222 (1.00) |
0.136 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.164 (1.00) |
0.0166 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
2e-05 (0.0167) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
20q gain | 189 (38%) | 304 |
0.0101 (1.00) |
0.0249 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.224 (1.00) |
0.0345 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.00022 (0.167) |
5e-05 (0.04) |
1e-05 (0.00946) |
4q loss | 132 (27%) | 361 |
0.00058 (0.422) |
0.00767 (1.00) |
2e-05 (0.0167) |
1e-05 (0.00946) |
0.277 (1.00) |
0.00133 (0.918) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00027 (0.203) |
1e-05 (0.00946) |
5q loss | 137 (28%) | 356 |
0.0636 (1.00) |
0.0358 (1.00) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.00126 (0.874) |
0.00083 (0.592) |
1e-05 (0.00946) |
0.00014 (0.108) |
1e-05 (0.00946) |
1e-05 (0.00946) |
2e-05 (0.0167) |
1e-05 (0.00946) |
2p gain | 148 (30%) | 345 |
0.302 (1.00) |
0.243 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.454 (1.00) |
0.223 (1.00) |
0.00014 (0.108) |
6e-05 (0.0479) |
1e-05 (0.00946) |
0.00024 (0.182) |
0.00193 (1.00) |
1e-05 (0.00946) |
8q gain | 235 (48%) | 258 |
0.0241 (1.00) |
0.0467 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.285 (1.00) |
0.00526 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00077 (0.553) |
0.0003 (0.225) |
1e-05 (0.00946) |
17q gain | 186 (38%) | 307 |
0.305 (1.00) |
0.876 (1.00) |
1e-05 (0.00946) |
4e-05 (0.0323) |
0.613 (1.00) |
0.0181 (1.00) |
7e-05 (0.0556) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.00018 (0.138) |
0.057 (1.00) |
0.00024 (0.182) |
20p gain | 164 (33%) | 329 |
0.0822 (1.00) |
0.142 (1.00) |
0.00012 (0.0938) |
0.00018 (0.138) |
0.426 (1.00) |
0.0438 (1.00) |
0.00026 (0.196) |
1e-05 (0.00946) |
5e-05 (0.04) |
0.00372 (1.00) |
0.00018 (0.138) |
4e-05 (0.0323) |
19p loss | 235 (48%) | 258 |
0.815 (1.00) |
1 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.337 (1.00) |
0.276 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
6e-05 (0.0479) |
3e-05 (0.0244) |
0.00606 (1.00) |
7e-05 (0.0556) |
22q loss | 212 (43%) | 281 |
0.129 (1.00) |
0.167 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.806 (1.00) |
0.049 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00021 (0.16) |
0.00012 (0.0938) |
0.00035 (0.26) |
1e-05 (0.00946) |
4p loss | 116 (24%) | 377 |
0.184 (1.00) |
0.38 (1.00) |
7e-05 (0.0556) |
1e-05 (0.00946) |
0.196 (1.00) |
0.0155 (1.00) |
9e-05 (0.0707) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00581 (1.00) |
0.00053 (0.387) |
7p gain | 251 (51%) | 242 |
0.856 (1.00) |
0.536 (1.00) |
1e-05 (0.00946) |
0.00317 (1.00) |
0.00047 (0.345) |
0.00083 (0.592) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00059 (0.429) |
0.00038 (0.28) |
1e-05 (0.00946) |
15q loss | 233 (47%) | 260 |
0.101 (1.00) |
0.282 (1.00) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.124 (1.00) |
0.00246 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.0176 (1.00) |
0.0172 (1.00) |
0.00103 (0.728) |
16q loss | 137 (28%) | 356 |
0.547 (1.00) |
0.623 (1.00) |
2e-05 (0.0167) |
1e-05 (0.00946) |
0.0819 (1.00) |
0.0322 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00668 (1.00) |
0.00438 (1.00) |
0.00159 (1.00) |
9e-05 (0.0707) |
19q loss | 153 (31%) | 340 |
0.345 (1.00) |
0.465 (1.00) |
1e-05 (0.00946) |
2e-05 (0.0167) |
0.272 (1.00) |
0.455 (1.00) |
0.00024 (0.182) |
2e-05 (0.0167) |
0.00059 (0.429) |
0.00141 (0.966) |
0.0252 (1.00) |
0.00021 (0.16) |
7q gain | 207 (42%) | 286 |
0.481 (1.00) |
0.311 (1.00) |
1e-05 (0.00946) |
0.0287 (1.00) |
0.131 (1.00) |
0.114 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00275 (1.00) |
0.00695 (1.00) |
0.0122 (1.00) |
7e-05 (0.0556) |
10p gain | 105 (21%) | 388 |
0.237 (1.00) |
0.295 (1.00) |
0.00071 (0.511) |
1e-05 (0.00946) |
0.0184 (1.00) |
0.00117 (0.82) |
6e-05 (0.0479) |
1e-05 (0.00946) |
0.00924 (1.00) |
0.0018 (1.00) |
0.0379 (1.00) |
6e-05 (0.0479) |
11q gain | 112 (23%) | 381 |
0.0099 (1.00) |
0.0168 (1.00) |
1e-05 (0.00946) |
0.0595 (1.00) |
0.269 (1.00) |
0.123 (1.00) |
0.00451 (1.00) |
0.00033 (0.246) |
4e-05 (0.0323) |
0.0012 (0.838) |
0.00035 (0.26) |
2e-05 (0.0167) |
14q gain | 120 (24%) | 373 |
0.804 (1.00) |
0.844 (1.00) |
1e-05 (0.00946) |
0.00419 (1.00) |
0.236 (1.00) |
0.0741 (1.00) |
0.00012 (0.0938) |
2e-05 (0.0167) |
3e-05 (0.0244) |
0.00133 (0.918) |
0.00079 (0.565) |
0.00102 (0.723) |
13q loss | 243 (49%) | 250 |
0.105 (1.00) |
0.625 (1.00) |
1e-05 (0.00946) |
0.0119 (1.00) |
0.00048 (0.351) |
2e-05 (0.0167) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.0136 (1.00) |
0.0381 (1.00) |
0.0424 (1.00) |
0.0588 (1.00) |
21q loss | 157 (32%) | 336 |
0.184 (1.00) |
0.143 (1.00) |
1e-05 (0.00946) |
0.00067 (0.485) |
0.0314 (1.00) |
0.00132 (0.912) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.00037 (0.274) |
0.00012 (0.0938) |
0.00747 (1.00) |
0.00248 (1.00) |
3q gain | 86 (17%) | 407 |
0.0807 (1.00) |
0.126 (1.00) |
0.0012 (0.838) |
3e-05 (0.0244) |
0.0271 (1.00) |
0.0347 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.0167 (1.00) |
0.0586 (1.00) |
0.00957 (1.00) |
0.0384 (1.00) |
10q gain | 76 (15%) | 417 |
0.0379 (1.00) |
1e-05 (0.00946) |
0.285 (1.00) |
0.0973 (1.00) |
0.00028 (0.21) |
1e-05 (0.00946) |
0.373 (1.00) |
0.0339 (1.00) |
0.218 (1.00) |
0.077 (1.00) |
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11p gain | 92 (19%) | 401 |
0.00924 (1.00) |
0.00991 (1.00) |
2e-05 (0.0167) |
0.342 (1.00) |
0.521 (1.00) |
0.319 (1.00) |
0.215 (1.00) |
0.00045 (0.331) |
0.00054 (0.394) |
1e-05 (0.00946) |
0.00055 (0.401) |
2e-05 (0.0167) |
18q gain | 66 (13%) | 427 |
0.595 (1.00) |
0.147 (1.00) |
0.00018 (0.138) |
1e-05 (0.00946) |
0.0203 (1.00) |
0.0304 (1.00) |
0.00012 (0.0938) |
0.00118 (0.826) |
0.0104 (1.00) |
0.00071 (0.511) |
0.00236 (1.00) |
0.00122 (0.848) |
1p loss | 79 (16%) | 414 |
0.0806 (1.00) |
0.126 (1.00) |
2e-05 (0.0167) |
0.00116 (0.817) |
0.888 (1.00) |
0.25 (1.00) |
0.00016 (0.123) |
1e-05 (0.00946) |
0.53 (1.00) |
0.00102 (0.723) |
0.452 (1.00) |
0.102 (1.00) |
8p loss | 191 (39%) | 302 |
0.134 (1.00) |
0.0781 (1.00) |
1e-05 (0.00946) |
0.0139 (1.00) |
0.0516 (1.00) |
0.0079 (1.00) |
0.00013 (0.101) |
3e-05 (0.0244) |
0.00243 (1.00) |
0.00521 (1.00) |
0.00552 (1.00) |
0.00827 (1.00) |
9q loss | 238 (48%) | 255 |
0.499 (1.00) |
0.904 (1.00) |
4e-05 (0.0323) |
0.00224 (1.00) |
0.418 (1.00) |
0.00666 (1.00) |
0.14 (1.00) |
0.00031 (0.231) |
0.00616 (1.00) |
3e-05 (0.0244) |
0.024 (1.00) |
0.00891 (1.00) |
10p loss | 108 (22%) | 385 |
0.817 (1.00) |
0.788 (1.00) |
2e-05 (0.0167) |
0.129 (1.00) |
0.0399 (1.00) |
0.0042 (1.00) |
3e-05 (0.0244) |
1e-05 (0.00946) |
0.00414 (1.00) |
0.00263 (1.00) |
0.00173 (1.00) |
0.00737 (1.00) |
10q loss | 128 (26%) | 365 |
0.817 (1.00) |
0.784 (1.00) |
2e-05 (0.0167) |
0.0655 (1.00) |
0.0559 (1.00) |
0.0272 (1.00) |
0.00133 (0.918) |
1e-05 (0.00946) |
0.00529 (1.00) |
0.00013 (0.101) |
0.00131 (0.907) |
0.00116 (0.817) |
16p loss | 108 (22%) | 385 |
0.455 (1.00) |
0.482 (1.00) |
2e-05 (0.0167) |
2e-05 (0.0167) |
0.235 (1.00) |
0.143 (1.00) |
1e-05 (0.00946) |
0.00126 (0.874) |
0.00834 (1.00) |
0.00706 (1.00) |
0.00804 (1.00) |
0.00388 (1.00) |
18q loss | 207 (42%) | 286 |
0.52 (1.00) |
0.424 (1.00) |
1e-05 (0.00946) |
0.508 (1.00) |
0.0039 (1.00) |
0.00139 (0.954) |
0.0003 (0.225) |
0.00017 (0.131) |
0.0236 (1.00) |
0.943 (1.00) |
0.69 (1.00) |
0.862 (1.00) |
1q gain | 297 (60%) | 196 |
0.121 (1.00) |
1 (1.00) |
0.0019 (1.00) |
0.00469 (1.00) |
0.00077 (0.553) |
0.0392 (1.00) |
0.127 (1.00) |
0.00015 (0.115) |
0.519 (1.00) |
0.0003 (0.225) |
0.0151 (1.00) |
0.169 (1.00) |
2q gain | 135 (27%) | 358 |
0.126 (1.00) |
0.288 (1.00) |
2e-05 (0.0167) |
1e-05 (0.00946) |
0.7 (1.00) |
0.793 (1.00) |
0.079 (1.00) |
0.0146 (1.00) |
0.00184 (1.00) |
0.0198 (1.00) |
0.0296 (1.00) |
0.00247 (1.00) |
3p gain | 40 (8%) | 453 |
0.00344 (1.00) |
0.0186 (1.00) |
0.11 (1.00) |
0.0287 (1.00) |
4e-05 (0.0323) |
0.00022 (0.167) |
0.0684 (1.00) |
0.475 (1.00) |
0.174 (1.00) |
0.343 (1.00) |
||
5p gain | 267 (54%) | 226 |
0.8 (1.00) |
0.363 (1.00) |
1e-05 (0.00946) |
0.297 (1.00) |
0.162 (1.00) |
0.845 (1.00) |
0.0239 (1.00) |
1e-05 (0.00946) |
0.0435 (1.00) |
0.305 (1.00) |
0.0921 (1.00) |
0.0042 (1.00) |
6p gain | 141 (29%) | 352 |
0.353 (1.00) |
0.0885 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.0301 (1.00) |
0.647 (1.00) |
0.108 (1.00) |
0.0122 (1.00) |
0.0268 (1.00) |
0.0681 (1.00) |
0.066 (1.00) |
0.00618 (1.00) |
8p gain | 123 (25%) | 370 |
0.152 (1.00) |
0.254 (1.00) |
1e-05 (0.00946) |
0.0937 (1.00) |
0.435 (1.00) |
0.511 (1.00) |
0.00167 (1.00) |
0.00026 (0.196) |
0.457 (1.00) |
0.735 (1.00) |
0.845 (1.00) |
0.289 (1.00) |
15q gain | 35 (7%) | 458 |
0.192 (1.00) |
0.149 (1.00) |
0.388 (1.00) |
0.306 (1.00) |
0.559 (1.00) |
0.464 (1.00) |
1e-05 (0.00946) |
1e-05 (0.00946) |
0.788 (1.00) |
0.504 (1.00) |
0.188 (1.00) |
0.864 (1.00) |
17p gain | 83 (17%) | 410 |
0.452 (1.00) |
0.687 (1.00) |
8e-05 (0.063) |
0.013 (1.00) |
0.869 (1.00) |
0.0756 (1.00) |
0.00838 (1.00) |
0.0226 (1.00) |
1e-05 (0.00946) |
0.00047 (0.345) |
0.231 (1.00) |
0.0073 (1.00) |
18p gain | 91 (18%) | 402 |
0.875 (1.00) |
0.633 (1.00) |
7e-05 (0.0556) |
1e-05 (0.00946) |
0.24 (1.00) |
0.595 (1.00) |
0.0214 (1.00) |
0.00309 (1.00) |
0.0151 (1.00) |
0.00194 (1.00) |
0.00579 (1.00) |
0.00041 (0.302) |
21q gain | 94 (19%) | 399 |
0.54 (1.00) |
0.265 (1.00) |
9e-05 (0.0707) |
0.404 (1.00) |
0.335 (1.00) |
0.0728 (1.00) |
0.0298 (1.00) |
7e-05 (0.0556) |
0.342 (1.00) |
0.308 (1.00) |
0.644 (1.00) |
0.588 (1.00) |
3p loss | 205 (42%) | 288 |
0.342 (1.00) |
0.114 (1.00) |
4e-05 (0.0323) |
0.00112 (0.79) |
0.262 (1.00) |
0.303 (1.00) |
0.0324 (1.00) |
1e-05 (0.00946) |
0.0213 (1.00) |
0.00786 (1.00) |
0.126 (1.00) |
0.00884 (1.00) |
6q loss | 208 (42%) | 285 |
0.246 (1.00) |
0.54 (1.00) |
0.03 (1.00) |
0.00014 (0.108) |
0.839 (1.00) |
0.303 (1.00) |
0.0807 (1.00) |
5e-05 (0.04) |
0.342 (1.00) |
0.0299 (1.00) |
0.742 (1.00) |
0.0594 (1.00) |
12q loss | 93 (19%) | 400 |
0.556 (1.00) |
0.426 (1.00) |
1e-05 (0.00946) |
0.0772 (1.00) |
0.0956 (1.00) |
0.0186 (1.00) |
0.00068 (0.491) |
9e-05 (0.0707) |
0.202 (1.00) |
0.00453 (1.00) |
0.558 (1.00) |
0.476 (1.00) |
17p loss | 206 (42%) | 287 |
0.549 (1.00) |
0.361 (1.00) |
1e-05 (0.00946) |
0.00017 (0.131) |
0.137 (1.00) |
0.0256 (1.00) |
0.0011 (0.777) |
0.00118 (0.826) |
0.501 (1.00) |
0.182 (1.00) |
0.608 (1.00) |
0.289 (1.00) |
1p gain | 133 (27%) | 360 |
0.387 (1.00) |
1 (1.00) |
1e-05 (0.00946) |
0.387 (1.00) |
0.0742 (1.00) |
0.00447 (1.00) |
0.129 (1.00) |
0.0314 (1.00) |
0.0715 (1.00) |
0.0496 (1.00) |
0.31 (1.00) |
0.826 (1.00) |
4p gain | 80 (16%) | 413 |
0.876 (1.00) |
1 (1.00) |
1e-05 (0.00946) |
0.269 (1.00) |
0.299 (1.00) |
0.046 (1.00) |
0.0436 (1.00) |
0.284 (1.00) |
0.0906 (1.00) |
0.435 (1.00) |
0.439 (1.00) |
0.194 (1.00) |
5q gain | 124 (25%) | 369 |
0.194 (1.00) |
0.285 (1.00) |
0.00571 (1.00) |
0.00031 (0.231) |
0.028 (1.00) |
0.281 (1.00) |
0.00588 (1.00) |
0.028 (1.00) |
0.146 (1.00) |
0.00042 (0.309) |
0.0365 (1.00) |
0.00851 (1.00) |
9p gain | 42 (9%) | 451 |
0.014 (1.00) |
0.0722 (1.00) |
0.44 (1.00) |
0.216 (1.00) |
0.00019 (0.145) |
0.00509 (1.00) |
0.22 (1.00) |
0.345 (1.00) |
0.206 (1.00) |
0.284 (1.00) |
||
7p loss | 33 (7%) | 460 |
1 (1.00) |
1 (1.00) |
3e-05 (0.0244) |
0.043 (1.00) |
0.329 (1.00) |
0.945 (1.00) |
0.00588 (1.00) |
0.00278 (1.00) |
0.273 (1.00) |
0.197 (1.00) |
0.899 (1.00) |
0.323 (1.00) |
8q loss | 54 (11%) | 439 |
0.00025 (0.188) |
0.93 (1.00) |
0.297 (1.00) |
0.495 (1.00) |
0.174 (1.00) |
0.0637 (1.00) |
0.21 (1.00) |
0.828 (1.00) |
0.42 (1.00) |
0.538 (1.00) |
||
9p loss | 254 (52%) | 239 |
0.0512 (1.00) |
0.598 (1.00) |
0.00199 (1.00) |
0.123 (1.00) |
0.217 (1.00) |
0.0251 (1.00) |
0.0009 (0.64) |
8e-05 (0.063) |
0.0617 (1.00) |
0.0106 (1.00) |
0.35 (1.00) |
0.515 (1.00) |
11p loss | 108 (22%) | 385 |
0.145 (1.00) |
0.0703 (1.00) |
0.00012 (0.0938) |
0.00991 (1.00) |
0.0365 (1.00) |
0.135 (1.00) |
0.00214 (1.00) |
0.00406 (1.00) |
0.0263 (1.00) |
0.0349 (1.00) |
0.0271 (1.00) |
0.00432 (1.00) |
17q loss | 55 (11%) | 438 |
0.296 (1.00) |
0.473 (1.00) |
0.00013 (0.101) |
0.0163 (1.00) |
0.0101 (1.00) |
0.0247 (1.00) |
0.139 (1.00) |
0.508 (1.00) |
0.417 (1.00) |
0.308 (1.00) |
0.0821 (1.00) |
0.0764 (1.00) |
18p loss | 169 (34%) | 324 |
0.437 (1.00) |
0.455 (1.00) |
3e-05 (0.0244) |
0.714 (1.00) |
0.0373 (1.00) |
0.00841 (1.00) |
0.0229 (1.00) |
0.00152 (1.00) |
0.029 (1.00) |
0.798 (1.00) |
0.149 (1.00) |
0.504 (1.00) |
4q gain | 46 (9%) | 447 |
0.333 (1.00) |
0.585 (1.00) |
0.0113 (1.00) |
0.679 (1.00) |
0.4 (1.00) |
0.133 (1.00) |
0.00744 (1.00) |
0.00358 (1.00) |
0.0173 (1.00) |
0.0492 (1.00) |
0.163 (1.00) |
0.247 (1.00) |
6q gain | 60 (12%) | 433 |
1 (1.00) |
1 (1.00) |
0.0125 (1.00) |
0.00539 (1.00) |
0.168 (1.00) |
0.903 (1.00) |
0.217 (1.00) |
0.0199 (1.00) |
0.00218 (1.00) |
0.0161 (1.00) |
0.284 (1.00) |
0.00545 (1.00) |
9q gain | 30 (6%) | 463 |
0.268 (1.00) |
0.547 (1.00) |
0.572 (1.00) |
0.629 (1.00) |
0.0775 (1.00) |
0.0666 (1.00) |
0.481 (1.00) |
0.933 (1.00) |
0.445 (1.00) |
0.35 (1.00) |
||
13q gain | 43 (9%) | 450 |
0.413 (1.00) |
0.543 (1.00) |
0.758 (1.00) |
0.0152 (1.00) |
0.0512 (1.00) |
0.5 (1.00) |
0.0605 (1.00) |
0.128 (1.00) |
0.976 (1.00) |
0.131 (1.00) |
0.796 (1.00) |
0.664 (1.00) |
16p gain | 127 (26%) | 366 |
0.534 (1.00) |
0.336 (1.00) |
0.00307 (1.00) |
0.0619 (1.00) |
0.312 (1.00) |
0.123 (1.00) |
0.175 (1.00) |
0.00691 (1.00) |
0.0102 (1.00) |
0.0715 (1.00) |
0.0472 (1.00) |
0.0303 (1.00) |
16q gain | 94 (19%) | 399 |
0.436 (1.00) |
0.153 (1.00) |
0.00265 (1.00) |
0.0898 (1.00) |
0.0706 (1.00) |
0.0227 (1.00) |
0.424 (1.00) |
0.0249 (1.00) |
0.00201 (1.00) |
0.0129 (1.00) |
0.0207 (1.00) |
0.0282 (1.00) |
19p gain | 32 (6%) | 461 |
0.192 (1.00) |
0.0398 (1.00) |
0.188 (1.00) |
0.766 (1.00) |
1 (1.00) |
0.852 (1.00) |
0.994 (1.00) |
0.743 (1.00) |
0.453 (1.00) |
0.886 (1.00) |
0.0195 (1.00) |
0.71 (1.00) |
19q gain | 71 (14%) | 422 |
0.0513 (1.00) |
0.0415 (1.00) |
0.00313 (1.00) |
0.0146 (1.00) |
0.941 (1.00) |
0.614 (1.00) |
0.182 (1.00) |
0.0162 (1.00) |
0.368 (1.00) |
0.0922 (1.00) |
0.0716 (1.00) |
0.0241 (1.00) |
22q gain | 61 (12%) | 432 |
0.107 (1.00) |
0.121 (1.00) |
0.00333 (1.00) |
0.764 (1.00) |
0.236 (1.00) |
0.19 (1.00) |
0.178 (1.00) |
0.0964 (1.00) |
0.607 (1.00) |
0.78 (1.00) |
0.477 (1.00) |
0.298 (1.00) |
xq gain | 68 (14%) | 425 |
0.656 (1.00) |
0.248 (1.00) |
0.00067 (0.485) |
0.31 (1.00) |
0.273 (1.00) |
0.403 (1.00) |
0.0288 (1.00) |
0.00639 (1.00) |
0.117 (1.00) |
0.421 (1.00) |
0.217 (1.00) |
0.0763 (1.00) |
1q loss | 28 (6%) | 465 |
0.18 (1.00) |
0.0128 (1.00) |
0.194 (1.00) |
0.156 (1.00) |
0.0478 (1.00) |
0.166 (1.00) |
0.747 (1.00) |
0.323 (1.00) |
0.305 (1.00) |
0.162 (1.00) |
||
2p loss | 24 (5%) | 469 |
0.75 (1.00) |
0.581 (1.00) |
0.124 (1.00) |
0.339 (1.00) |
0.61 (1.00) |
0.93 (1.00) |
0.978 (1.00) |
0.902 (1.00) |
0.083 (1.00) |
0.789 (1.00) |
0.0719 (1.00) |
0.355 (1.00) |
2q loss | 23 (5%) | 470 |
0.00136 (0.934) |
0.111 (1.00) |
0.427 (1.00) |
1 (1.00) |
0.292 (1.00) |
0.388 (1.00) |
0.353 (1.00) |
0.388 (1.00) |
0.447 (1.00) |
0.166 (1.00) |
||
3q loss | 140 (28%) | 353 |
0.554 (1.00) |
0.141 (1.00) |
0.0151 (1.00) |
0.00719 (1.00) |
0.918 (1.00) |
0.914 (1.00) |
0.0663 (1.00) |
0.00078 (0.558) |
0.689 (1.00) |
0.0656 (1.00) |
0.855 (1.00) |
0.498 (1.00) |
5p loss | 40 (8%) | 453 |
0.593 (1.00) |
0.309 (1.00) |
0.695 (1.00) |
0.0225 (1.00) |
0.406 (1.00) |
0.0994 (1.00) |
0.0134 (1.00) |
0.0012 (0.838) |
0.0649 (1.00) |
0.0813 (1.00) |
0.0164 (1.00) |
0.00795 (1.00) |
6p loss | 101 (20%) | 392 |
0.0122 (1.00) |
0.00439 (1.00) |
0.0511 (1.00) |
0.126 (1.00) |
0.534 (1.00) |
0.477 (1.00) |
0.188 (1.00) |
0.277 (1.00) |
0.542 (1.00) |
0.183 (1.00) |
0.498 (1.00) |
0.706 (1.00) |
7q loss | 39 (8%) | 454 |
0.802 (1.00) |
0.256 (1.00) |
0.00715 (1.00) |
0.074 (1.00) |
0.905 (1.00) |
0.155 (1.00) |
0.104 (1.00) |
0.0332 (1.00) |
0.375 (1.00) |
0.0559 (1.00) |
0.273 (1.00) |
0.84 (1.00) |
11q loss | 88 (18%) | 405 |
0.84 (1.00) |
0.484 (1.00) |
0.00645 (1.00) |
0.00435 (1.00) |
0.00334 (1.00) |
0.277 (1.00) |
0.00093 (0.66) |
0.00602 (1.00) |
0.0557 (1.00) |
0.103 (1.00) |
0.0293 (1.00) |
0.0332 (1.00) |
12p loss | 106 (22%) | 387 |
0.631 (1.00) |
0.882 (1.00) |
0.00638 (1.00) |
0.262 (1.00) |
0.0457 (1.00) |
0.0589 (1.00) |
0.00442 (1.00) |
0.00035 (0.26) |
0.264 (1.00) |
0.113 (1.00) |
0.613 (1.00) |
0.812 (1.00) |
14q loss | 111 (23%) | 382 |
0.931 (1.00) |
0.408 (1.00) |
0.0601 (1.00) |
0.142 (1.00) |
0.174 (1.00) |
0.282 (1.00) |
0.0318 (1.00) |
0.00486 (1.00) |
0.0734 (1.00) |
0.00623 (1.00) |
0.0008 (0.571) |
0.00565 (1.00) |
20p loss | 114 (23%) | 379 |
0.335 (1.00) |
0.454 (1.00) |
0.00037 (0.274) |
0.00116 (0.817) |
0.00059 (0.429) |
0.00187 (1.00) |
0.0159 (1.00) |
0.0053 (1.00) |
0.967 (1.00) |
0.732 (1.00) |
0.129 (1.00) |
0.857 (1.00) |
20q loss | 67 (14%) | 426 |
0.513 (1.00) |
0.876 (1.00) |
0.396 (1.00) |
0.515 (1.00) |
0.26 (1.00) |
0.404 (1.00) |
0.663 (1.00) |
0.735 (1.00) |
0.608 (1.00) |
0.72 (1.00) |
0.132 (1.00) |
0.669 (1.00) |
xq loss | 64 (13%) | 429 |
0.272 (1.00) |
0.0541 (1.00) |
0.0007 (0.505) |
0.0083 (1.00) |
0.434 (1.00) |
0.643 (1.00) |
0.425 (1.00) |
0.572 (1.00) |
0.349 (1.00) |
0.473 (1.00) |
0.506 (1.00) |
0.597 (1.00) |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
1P GAIN MUTATED | 79 | 35 | 19 |
1P GAIN WILD-TYPE | 107 | 181 | 72 |
P value = 0.00015 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
1Q GAIN MUTATED | 54 | 38 | 15 | 45 | 36 | 37 | 30 | 6 | 31 |
1Q GAIN WILD-TYPE | 29 | 19 | 29 | 39 | 10 | 14 | 19 | 12 | 23 |
P value = 3e-04 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
1Q GAIN MUTATED | 52 | 37 | 63 | 77 | 50 | 15 |
1Q GAIN WILD-TYPE | 19 | 7 | 55 | 60 | 33 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
2P GAIN MUTATED | 74 | 36 | 38 |
2P GAIN WILD-TYPE | 112 | 180 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
2P GAIN MUTATED | 9 | 57 | 34 | 24 |
2P GAIN WILD-TYPE | 83 | 68 | 81 | 75 |
P value = 0.00014 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
2P GAIN MUTATED | 40 | 18 | 25 | 49 | 16 |
2P GAIN WILD-TYPE | 98 | 94 | 51 | 57 | 38 |
P value = 6e-05 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
2P GAIN MUTATED | 23 | 11 | 11 | 32 | 8 | 26 | 21 | 0 | 16 |
2P GAIN WILD-TYPE | 60 | 46 | 33 | 52 | 38 | 25 | 28 | 18 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
2P GAIN MUTATED | 37 | 96 | 14 |
2P GAIN WILD-TYPE | 142 | 135 | 64 |
P value = 0.00024 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
2P GAIN MUTATED | 13 | 18 | 42 | 32 | 37 | 5 |
2P GAIN WILD-TYPE | 58 | 26 | 76 | 105 | 46 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
2P GAIN MUTATED | 37 | 82 | 4 |
2P GAIN WILD-TYPE | 149 | 127 | 26 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
2Q GAIN MUTATED | 60 | 37 | 38 |
2Q GAIN WILD-TYPE | 126 | 179 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
2Q GAIN MUTATED | 10 | 49 | 35 | 20 |
2Q GAIN WILD-TYPE | 82 | 76 | 80 | 79 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
3P GAIN MUTATED | 20 | 0 | 3 | 12 | 5 |
3P GAIN WILD-TYPE | 118 | 112 | 73 | 94 | 49 |
P value = 0.00022 (Fisher's exact test), Q value = 0.17
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
3P GAIN MUTATED | 11 | 0 | 4 | 17 | 1 | 2 | 2 | 0 | 3 |
3P GAIN WILD-TYPE | 72 | 57 | 40 | 67 | 45 | 49 | 47 | 18 | 51 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
3Q GAIN MUTATED | 3 | 32 | 23 | 19 |
3Q GAIN WILD-TYPE | 89 | 93 | 92 | 80 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
3Q GAIN MUTATED | 34 | 2 | 16 | 23 | 10 |
3Q GAIN WILD-TYPE | 104 | 110 | 60 | 83 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
3Q GAIN MUTATED | 17 | 2 | 10 | 34 | 2 | 6 | 8 | 2 | 4 |
3Q GAIN WILD-TYPE | 66 | 55 | 34 | 50 | 44 | 45 | 41 | 16 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
4P GAIN MUTATED | 48 | 18 | 14 |
4P GAIN WILD-TYPE | 138 | 198 | 77 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
5P GAIN MUTATED | 135 | 84 | 48 |
5P GAIN WILD-TYPE | 51 | 132 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
5P GAIN MUTATED | 58 | 29 | 18 | 55 | 16 | 31 | 25 | 0 | 30 |
5P GAIN WILD-TYPE | 25 | 28 | 26 | 29 | 30 | 20 | 24 | 18 | 24 |
P value = 0.00031 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
5Q GAIN MUTATED | 40 | 27 | 24 | 19 |
5Q GAIN WILD-TYPE | 52 | 98 | 91 | 80 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
6P GAIN MUTATED | 62 | 40 | 39 |
6P GAIN WILD-TYPE | 124 | 176 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
6P GAIN MUTATED | 18 | 58 | 31 | 14 |
6P GAIN WILD-TYPE | 74 | 67 | 84 | 85 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
7P GAIN MUTATED | 145 | 72 | 34 |
7P GAIN WILD-TYPE | 41 | 144 | 57 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
7P GAIN MUTATED | 103 | 32 | 38 | 47 | 27 |
7P GAIN WILD-TYPE | 35 | 80 | 38 | 59 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
7P GAIN MUTATED | 53 | 20 | 35 | 51 | 9 | 21 | 27 | 2 | 29 |
7P GAIN WILD-TYPE | 30 | 37 | 9 | 33 | 37 | 30 | 22 | 16 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
7P GAIN MUTATED | 66 | 130 | 52 |
7P GAIN WILD-TYPE | 113 | 101 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
7P GAIN MUTATED | 69 | 122 | 23 |
7P GAIN WILD-TYPE | 117 | 87 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
7Q GAIN MUTATED | 114 | 63 | 30 |
7Q GAIN WILD-TYPE | 72 | 153 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
7Q GAIN MUTATED | 87 | 27 | 33 | 34 | 22 |
7Q GAIN WILD-TYPE | 51 | 85 | 43 | 72 | 32 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
7Q GAIN MUTATED | 47 | 17 | 30 | 38 | 7 | 16 | 24 | 2 | 22 |
7Q GAIN WILD-TYPE | 36 | 40 | 14 | 46 | 39 | 35 | 25 | 16 | 32 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
7Q GAIN MUTATED | 56 | 100 | 18 |
7Q GAIN WILD-TYPE | 130 | 109 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
8P GAIN MUTATED | 33 | 41 | 49 |
8P GAIN WILD-TYPE | 153 | 175 | 42 |
P value = 0.00026 (Fisher's exact test), Q value = 0.2
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
8P GAIN MUTATED | 22 | 6 | 8 | 17 | 14 | 23 | 16 | 0 | 12 |
8P GAIN WILD-TYPE | 61 | 51 | 36 | 67 | 32 | 28 | 33 | 18 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
8Q GAIN MUTATED | 92 | 64 | 79 |
8Q GAIN WILD-TYPE | 94 | 152 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
8Q GAIN MUTATED | 27 | 81 | 61 | 38 |
8Q GAIN WILD-TYPE | 65 | 44 | 54 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
8Q GAIN MUTATED | 68 | 33 | 32 | 74 | 21 |
8Q GAIN WILD-TYPE | 70 | 79 | 44 | 32 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
8Q GAIN MUTATED | 35 | 17 | 28 | 42 | 19 | 41 | 25 | 0 | 21 |
8Q GAIN WILD-TYPE | 48 | 40 | 16 | 42 | 27 | 10 | 24 | 18 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
8Q GAIN MUTATED | 60 | 134 | 39 |
8Q GAIN WILD-TYPE | 119 | 97 | 39 |
P value = 3e-04 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
8Q GAIN MUTATED | 56 | 112 | 37 |
8Q GAIN WILD-TYPE | 99 | 80 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
8Q GAIN MUTATED | 67 | 127 | 11 |
8Q GAIN WILD-TYPE | 119 | 82 | 19 |
P value = 0.00019 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
9P GAIN MUTATED | 14 | 4 | 0 | 16 | 7 |
9P GAIN WILD-TYPE | 124 | 108 | 76 | 90 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
10P GAIN MUTATED | 3 | 43 | 34 | 13 |
10P GAIN WILD-TYPE | 89 | 82 | 81 | 86 |
P value = 6e-05 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
10P GAIN MUTATED | 27 | 10 | 20 | 37 | 9 |
10P GAIN WILD-TYPE | 111 | 102 | 56 | 69 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
10P GAIN MUTATED | 13 | 3 | 9 | 16 | 13 | 22 | 17 | 0 | 10 |
10P GAIN WILD-TYPE | 70 | 54 | 35 | 68 | 33 | 29 | 32 | 18 | 44 |
P value = 6e-05 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
10P GAIN MUTATED | 26 | 64 | 3 |
10P GAIN WILD-TYPE | 160 | 145 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
10Q GAIN MUTATED | 3 | 33 | 22 | 9 |
10Q GAIN WILD-TYPE | 89 | 92 | 93 | 90 |
P value = 0.00028 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
10Q GAIN MUTATED | 17 | 7 | 16 | 28 | 6 |
10Q GAIN WILD-TYPE | 121 | 105 | 60 | 78 | 48 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
10Q GAIN MUTATED | 10 | 2 | 7 | 7 | 13 | 16 | 13 | 0 | 6 |
10Q GAIN WILD-TYPE | 73 | 55 | 37 | 77 | 33 | 35 | 36 | 18 | 48 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
11P GAIN MUTATED | 45 | 21 | 26 |
11P GAIN WILD-TYPE | 141 | 195 | 65 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
11P GAIN MUTATED | 5 | 11 | 16 | 18 | 30 | 11 |
11P GAIN WILD-TYPE | 66 | 33 | 102 | 119 | 53 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
11P GAIN MUTATED | 18 | 49 | 12 |
11P GAIN WILD-TYPE | 168 | 160 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
11Q GAIN MUTATED | 63 | 23 | 26 |
11Q GAIN WILD-TYPE | 123 | 193 | 65 |
P value = 0.00033 (Fisher's exact test), Q value = 0.25
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
11Q GAIN MUTATED | 21 | 15 | 11 | 28 | 1 | 17 | 9 | 1 | 9 |
11Q GAIN WILD-TYPE | 62 | 42 | 33 | 56 | 45 | 34 | 40 | 17 | 45 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
11Q GAIN MUTATED | 21 | 65 | 23 |
11Q GAIN WILD-TYPE | 158 | 166 | 55 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
11Q GAIN MUTATED | 23 | 59 | 13 |
11Q GAIN WILD-TYPE | 163 | 150 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
12P GAIN MUTATED | 50 | 38 | 43 |
12P GAIN WILD-TYPE | 136 | 178 | 48 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
12P GAIN MUTATED | 8 | 51 | 29 | 28 |
12P GAIN WILD-TYPE | 84 | 74 | 86 | 71 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
12P GAIN MUTATED | 40 | 5 | 30 | 42 | 12 |
12P GAIN WILD-TYPE | 98 | 107 | 46 | 64 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
12P GAIN MUTATED | 16 | 5 | 16 | 26 | 3 | 27 | 24 | 2 | 10 |
12P GAIN WILD-TYPE | 67 | 52 | 28 | 58 | 43 | 24 | 25 | 16 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
12P GAIN MUTATED | 28 | 83 | 18 |
12P GAIN WILD-TYPE | 151 | 148 | 60 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
12P GAIN MUTATED | 9 | 20 | 33 | 22 | 37 | 8 |
12P GAIN WILD-TYPE | 62 | 24 | 85 | 115 | 46 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
12P GAIN MUTATED | 18 | 73 | 23 |
12P GAIN WILD-TYPE | 137 | 119 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
12P GAIN MUTATED | 25 | 82 | 7 |
12P GAIN WILD-TYPE | 161 | 127 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
12Q GAIN MUTATED | 41 | 39 | 46 |
12Q GAIN WILD-TYPE | 145 | 177 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
12Q GAIN MUTATED | 5 | 49 | 29 | 28 |
12Q GAIN WILD-TYPE | 87 | 76 | 86 | 71 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
12Q GAIN MUTATED | 31 | 6 | 29 | 49 | 9 |
12Q GAIN WILD-TYPE | 107 | 106 | 47 | 57 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
12Q GAIN MUTATED | 15 | 6 | 15 | 20 | 3 | 32 | 25 | 2 | 6 |
12Q GAIN WILD-TYPE | 68 | 51 | 29 | 64 | 43 | 19 | 24 | 16 | 48 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
12Q GAIN MUTATED | 27 | 81 | 16 |
12Q GAIN WILD-TYPE | 152 | 150 | 62 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
12Q GAIN MUTATED | 12 | 23 | 28 | 15 | 36 | 10 |
12Q GAIN WILD-TYPE | 59 | 21 | 90 | 122 | 47 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
12Q GAIN MUTATED | 17 | 68 | 24 |
12Q GAIN WILD-TYPE | 138 | 124 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
12Q GAIN MUTATED | 22 | 78 | 9 |
12Q GAIN WILD-TYPE | 164 | 131 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
14Q GAIN MUTATED | 47 | 30 | 43 |
14Q GAIN WILD-TYPE | 139 | 186 | 48 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
14Q GAIN MUTATED | 37 | 19 | 9 | 42 | 11 |
14Q GAIN WILD-TYPE | 101 | 93 | 67 | 64 | 43 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
14Q GAIN MUTATED | 14 | 12 | 11 | 38 | 8 | 19 | 8 | 0 | 8 |
14Q GAIN WILD-TYPE | 69 | 45 | 33 | 46 | 38 | 32 | 41 | 18 | 46 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
14Q GAIN MUTATED | 23 | 69 | 25 |
14Q GAIN WILD-TYPE | 156 | 162 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
15Q GAIN MUTATED | 3 | 5 | 19 | 6 | 2 |
15Q GAIN WILD-TYPE | 135 | 107 | 57 | 100 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
15Q GAIN MUTATED | 2 | 1 | 0 | 3 | 3 | 4 | 15 | 3 | 4 |
15Q GAIN WILD-TYPE | 81 | 56 | 44 | 81 | 43 | 47 | 34 | 15 | 50 |
P value = 8e-05 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
17P GAIN MUTATED | 28 | 25 | 30 |
17P GAIN WILD-TYPE | 158 | 191 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
17P GAIN MUTATED | 16 | 58 | 7 |
17P GAIN WILD-TYPE | 163 | 173 | 71 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
17Q GAIN MUTATED | 91 | 50 | 45 |
17Q GAIN WILD-TYPE | 95 | 166 | 46 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
17Q GAIN MUTATED | 19 | 56 | 57 | 31 |
17Q GAIN WILD-TYPE | 73 | 69 | 58 | 68 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
17Q GAIN MUTATED | 72 | 28 | 20 | 44 | 18 |
17Q GAIN WILD-TYPE | 66 | 84 | 56 | 62 | 36 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
17Q GAIN MUTATED | 40 | 19 | 21 | 41 | 5 | 26 | 14 | 0 | 16 |
17Q GAIN WILD-TYPE | 43 | 38 | 23 | 43 | 41 | 25 | 35 | 18 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
17Q GAIN MUTATED | 46 | 112 | 26 |
17Q GAIN WILD-TYPE | 133 | 119 | 52 |
P value = 0.00018 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
17Q GAIN MUTATED | 19 | 25 | 48 | 37 | 43 | 12 |
17Q GAIN WILD-TYPE | 52 | 19 | 70 | 100 | 40 | 23 |
P value = 0.00024 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
17Q GAIN MUTATED | 52 | 100 | 10 |
17Q GAIN WILD-TYPE | 134 | 109 | 20 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
18P GAIN MUTATED | 47 | 21 | 23 |
18P GAIN WILD-TYPE | 139 | 195 | 68 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
18P GAIN MUTATED | 5 | 41 | 24 | 9 |
18P GAIN WILD-TYPE | 87 | 84 | 91 | 90 |
P value = 0.00018 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
18Q GAIN MUTATED | 29 | 15 | 22 |
18Q GAIN WILD-TYPE | 157 | 201 | 69 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
18Q GAIN MUTATED | 3 | 33 | 16 | 4 |
18Q GAIN WILD-TYPE | 89 | 92 | 99 | 95 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
18Q GAIN MUTATED | 14 | 8 | 9 | 30 | 4 |
18Q GAIN WILD-TYPE | 124 | 104 | 67 | 76 | 50 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
20P GAIN MUTATED | 62 | 55 | 47 |
20P GAIN WILD-TYPE | 124 | 161 | 44 |
P value = 0.00018 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
20P GAIN MUTATED | 19 | 59 | 30 | 34 |
20P GAIN WILD-TYPE | 73 | 66 | 85 | 65 |
P value = 0.00026 (Fisher's exact test), Q value = 0.2
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
20P GAIN MUTATED | 45 | 27 | 24 | 53 | 11 |
20P GAIN WILD-TYPE | 93 | 85 | 52 | 53 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
20P GAIN MUTATED | 18 | 10 | 20 | 45 | 14 | 25 | 15 | 1 | 12 |
20P GAIN WILD-TYPE | 65 | 47 | 24 | 39 | 32 | 26 | 34 | 17 | 42 |
P value = 5e-05 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
20P GAIN MUTATED | 37 | 92 | 33 |
20P GAIN WILD-TYPE | 142 | 139 | 45 |
P value = 0.00018 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
20P GAIN MUTATED | 33 | 75 | 34 |
20P GAIN WILD-TYPE | 122 | 117 | 44 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
20P GAIN MUTATED | 41 | 88 | 13 |
20P GAIN WILD-TYPE | 145 | 121 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
20Q GAIN MUTATED | 80 | 56 | 53 |
20Q GAIN WILD-TYPE | 106 | 160 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
20Q GAIN MUTATED | 19 | 69 | 42 | 35 |
20Q GAIN WILD-TYPE | 73 | 56 | 73 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
20Q GAIN MUTATED | 59 | 24 | 27 | 59 | 16 |
20Q GAIN WILD-TYPE | 79 | 88 | 49 | 47 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
20Q GAIN MUTATED | 26 | 10 | 25 | 51 | 14 | 27 | 18 | 1 | 13 |
20Q GAIN WILD-TYPE | 57 | 47 | 19 | 33 | 32 | 24 | 31 | 17 | 41 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
20Q GAIN MUTATED | 42 | 109 | 34 |
20Q GAIN WILD-TYPE | 137 | 122 | 44 |
P value = 0.00022 (Fisher's exact test), Q value = 0.17
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
20Q GAIN MUTATED | 15 | 16 | 51 | 44 | 47 | 12 |
20Q GAIN WILD-TYPE | 56 | 28 | 67 | 93 | 36 | 23 |
P value = 5e-05 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
20Q GAIN MUTATED | 38 | 92 | 35 |
20Q GAIN WILD-TYPE | 117 | 100 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
20Q GAIN MUTATED | 45 | 106 | 14 |
20Q GAIN WILD-TYPE | 141 | 103 | 16 |
P value = 9e-05 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
21Q GAIN MUTATED | 54 | 31 | 9 |
21Q GAIN WILD-TYPE | 132 | 185 | 82 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
21Q GAIN MUTATED | 25 | 17 | 5 | 24 | 3 | 4 | 7 | 0 | 8 |
21Q GAIN WILD-TYPE | 58 | 40 | 39 | 60 | 43 | 47 | 42 | 18 | 46 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
1P LOSS MUTATED | 17 | 33 | 29 |
1P LOSS WILD-TYPE | 169 | 183 | 62 |
P value = 0.00016 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
1P LOSS MUTATED | 19 | 10 | 14 | 30 | 2 |
1P LOSS WILD-TYPE | 119 | 102 | 62 | 76 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
1P LOSS MUTATED | 7 | 7 | 10 | 6 | 10 | 20 | 11 | 1 | 3 |
1P LOSS WILD-TYPE | 76 | 50 | 34 | 78 | 36 | 31 | 38 | 17 | 51 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
3P LOSS MUTATED | 83 | 68 | 54 |
3P LOSS WILD-TYPE | 103 | 148 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
3P LOSS MUTATED | 28 | 25 | 14 | 41 | 17 | 34 | 26 | 0 | 18 |
3P LOSS WILD-TYPE | 55 | 32 | 30 | 43 | 29 | 17 | 23 | 18 | 36 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
4P LOSS MUTATED | 50 | 32 | 34 |
4P LOSS WILD-TYPE | 136 | 184 | 57 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
4P LOSS MUTATED | 6 | 43 | 23 | 25 |
4P LOSS WILD-TYPE | 86 | 82 | 92 | 74 |
P value = 9e-05 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
4P LOSS MUTATED | 30 | 12 | 22 | 40 | 11 |
4P LOSS WILD-TYPE | 108 | 100 | 54 | 66 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
4P LOSS MUTATED | 16 | 9 | 7 | 35 | 2 | 20 | 14 | 2 | 10 |
4P LOSS WILD-TYPE | 67 | 48 | 37 | 49 | 44 | 31 | 35 | 16 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
4P LOSS MUTATED | 23 | 76 | 16 |
4P LOSS WILD-TYPE | 156 | 155 | 62 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
4P LOSS MUTATED | 6 | 14 | 39 | 24 | 29 | 3 |
4P LOSS WILD-TYPE | 65 | 30 | 79 | 113 | 54 | 32 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
4Q LOSS MUTATED | 56 | 36 | 40 |
4Q LOSS WILD-TYPE | 130 | 180 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
4Q LOSS MUTATED | 5 | 55 | 22 | 29 |
4Q LOSS WILD-TYPE | 87 | 70 | 93 | 70 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
4Q LOSS MUTATED | 33 | 12 | 25 | 49 | 11 |
4Q LOSS WILD-TYPE | 105 | 100 | 51 | 57 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
4Q LOSS MUTATED | 17 | 6 | 6 | 38 | 5 | 28 | 19 | 1 | 10 |
4Q LOSS WILD-TYPE | 66 | 51 | 38 | 46 | 41 | 23 | 30 | 17 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
4Q LOSS MUTATED | 26 | 85 | 20 |
4Q LOSS WILD-TYPE | 153 | 146 | 58 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
4Q LOSS MUTATED | 9 | 16 | 39 | 23 | 38 | 6 |
4Q LOSS WILD-TYPE | 62 | 28 | 79 | 114 | 45 | 29 |
P value = 0.00027 (Fisher's exact test), Q value = 0.2
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
4Q LOSS MUTATED | 26 | 68 | 17 |
4Q LOSS WILD-TYPE | 129 | 124 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
4Q LOSS MUTATED | 30 | 77 | 4 |
4Q LOSS WILD-TYPE | 156 | 132 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
5Q LOSS MUTATED | 69 | 30 | 38 |
5Q LOSS WILD-TYPE | 117 | 186 | 53 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
5Q LOSS MUTATED | 8 | 49 | 36 | 26 |
5Q LOSS WILD-TYPE | 84 | 76 | 79 | 73 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
5Q LOSS MUTATED | 47 | 12 | 22 | 44 | 9 |
5Q LOSS WILD-TYPE | 91 | 100 | 54 | 62 | 45 |
P value = 0.00014 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
5Q LOSS MUTATED | 25 | 5 | 13 | 32 | 7 | 20 | 18 | 1 | 13 |
5Q LOSS WILD-TYPE | 58 | 52 | 31 | 52 | 39 | 31 | 31 | 17 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
5Q LOSS MUTATED | 27 | 88 | 20 |
5Q LOSS WILD-TYPE | 152 | 143 | 58 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
5Q LOSS MUTATED | 10 | 16 | 39 | 25 | 40 | 5 |
5Q LOSS WILD-TYPE | 61 | 28 | 79 | 112 | 43 | 30 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 155 | 192 | 78 |
5Q LOSS MUTATED | 25 | 75 | 18 |
5Q LOSS WILD-TYPE | 130 | 117 | 60 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
5Q LOSS MUTATED | 28 | 85 | 5 |
5Q LOSS WILD-TYPE | 158 | 124 | 25 |
P value = 0.00014 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
6Q LOSS MUTATED | 41 | 57 | 62 | 24 |
6Q LOSS WILD-TYPE | 51 | 68 | 53 | 75 |
P value = 5e-05 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
6Q LOSS MUTATED | 43 | 20 | 22 | 23 | 28 | 29 | 15 | 3 | 21 |
6Q LOSS WILD-TYPE | 40 | 37 | 22 | 61 | 18 | 22 | 34 | 15 | 33 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
7P LOSS MUTATED | 5 | 11 | 17 |
7P LOSS WILD-TYPE | 181 | 205 | 74 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
8P LOSS MUTATED | 119 | 45 | 27 |
8P LOSS WILD-TYPE | 67 | 171 | 64 |
P value = 0.00013 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
8P LOSS MUTATED | 76 | 36 | 23 | 41 | 14 |
8P LOSS WILD-TYPE | 62 | 76 | 53 | 65 | 40 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
8P LOSS MUTATED | 38 | 23 | 25 | 46 | 8 | 16 | 14 | 2 | 18 |
8P LOSS WILD-TYPE | 45 | 34 | 19 | 38 | 38 | 35 | 35 | 16 | 36 |
P value = 0.00025 (Fisher's exact test), Q value = 0.19
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
8Q LOSS MUTATED | 34 | 16 | 4 |
8Q LOSS WILD-TYPE | 152 | 200 | 87 |
P value = 8e-05 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
9P LOSS MUTATED | 37 | 30 | 18 | 51 | 19 | 24 | 41 | 8 | 23 |
9P LOSS WILD-TYPE | 46 | 27 | 26 | 33 | 27 | 27 | 8 | 10 | 31 |
P value = 4e-05 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
9Q LOSS MUTATED | 101 | 80 | 57 |
9Q LOSS WILD-TYPE | 85 | 136 | 34 |
P value = 0.00031 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
9Q LOSS MUTATED | 36 | 27 | 18 | 52 | 13 | 29 | 33 | 4 | 24 |
9Q LOSS WILD-TYPE | 47 | 30 | 26 | 32 | 33 | 22 | 16 | 14 | 30 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
9Q LOSS MUTATED | 29 | 26 | 52 | 52 | 59 | 17 |
9Q LOSS WILD-TYPE | 42 | 18 | 66 | 85 | 24 | 18 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
10P LOSS MUTATED | 64 | 27 | 17 |
10P LOSS WILD-TYPE | 122 | 189 | 74 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
10P LOSS MUTATED | 46 | 18 | 5 | 23 | 15 |
10P LOSS WILD-TYPE | 92 | 94 | 71 | 83 | 39 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
10P LOSS MUTATED | 18 | 16 | 10 | 36 | 0 | 10 | 4 | 2 | 11 |
10P LOSS WILD-TYPE | 65 | 41 | 34 | 48 | 46 | 41 | 45 | 16 | 43 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
10Q LOSS MUTATED | 69 | 36 | 23 |
10Q LOSS WILD-TYPE | 117 | 180 | 68 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
10Q LOSS MUTATED | 23 | 16 | 12 | 44 | 0 | 10 | 9 | 2 | 11 |
10Q LOSS WILD-TYPE | 60 | 41 | 32 | 40 | 46 | 41 | 40 | 16 | 43 |
P value = 0.00013 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
10Q LOSS MUTATED | 10 | 8 | 28 | 29 | 34 | 17 |
10Q LOSS WILD-TYPE | 61 | 36 | 90 | 108 | 49 | 18 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
11P LOSS MUTATED | 53 | 28 | 27 |
11P LOSS WILD-TYPE | 133 | 188 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
12Q LOSS MUTATED | 54 | 32 | 7 |
12Q LOSS WILD-TYPE | 132 | 184 | 84 |
P value = 9e-05 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
12Q LOSS MUTATED | 23 | 12 | 4 | 23 | 10 | 1 | 3 | 2 | 14 |
12Q LOSS WILD-TYPE | 60 | 45 | 40 | 61 | 36 | 50 | 46 | 16 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
13Q LOSS MUTATED | 122 | 59 | 62 |
13Q LOSS WILD-TYPE | 64 | 157 | 29 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 112 | 71 | 52 |
13Q LOSS MUTATED | 66 | 16 | 29 |
13Q LOSS WILD-TYPE | 46 | 55 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
13Q LOSS MUTATED | 87 | 40 | 24 | 66 | 24 |
13Q LOSS WILD-TYPE | 51 | 72 | 52 | 40 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
13Q LOSS MUTATED | 53 | 22 | 25 | 49 | 10 | 36 | 19 | 1 | 26 |
13Q LOSS WILD-TYPE | 30 | 35 | 19 | 35 | 36 | 15 | 30 | 17 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
15Q LOSS MUTATED | 107 | 73 | 53 |
15Q LOSS WILD-TYPE | 79 | 143 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
15Q LOSS MUTATED | 23 | 66 | 67 | 47 |
15Q LOSS WILD-TYPE | 69 | 59 | 48 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
15Q LOSS MUTATED | 92 | 36 | 13 | 61 | 26 |
15Q LOSS WILD-TYPE | 46 | 76 | 63 | 45 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
15Q LOSS MUTATED | 47 | 23 | 31 | 49 | 7 | 34 | 9 | 0 | 28 |
15Q LOSS WILD-TYPE | 36 | 34 | 13 | 35 | 39 | 17 | 40 | 18 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
15Q LOSS MUTATED | 60 | 126 | 45 |
15Q LOSS WILD-TYPE | 119 | 105 | 33 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
16P LOSS MUTATED | 49 | 27 | 32 |
16P LOSS WILD-TYPE | 137 | 189 | 59 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
16P LOSS MUTATED | 5 | 37 | 36 | 18 |
16P LOSS WILD-TYPE | 87 | 88 | 79 | 81 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
16P LOSS MUTATED | 42 | 10 | 14 | 34 | 8 |
16P LOSS WILD-TYPE | 96 | 102 | 62 | 72 | 46 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
16Q LOSS MUTATED | 64 | 37 | 36 |
16Q LOSS WILD-TYPE | 122 | 179 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
16Q LOSS MUTATED | 8 | 45 | 44 | 21 |
16Q LOSS WILD-TYPE | 84 | 80 | 71 | 78 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
16Q LOSS MUTATED | 59 | 15 | 16 | 39 | 8 |
16Q LOSS WILD-TYPE | 79 | 97 | 60 | 67 | 46 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
16Q LOSS MUTATED | 35 | 7 | 20 | 29 | 9 | 17 | 10 | 0 | 10 |
16Q LOSS WILD-TYPE | 48 | 50 | 24 | 55 | 37 | 34 | 39 | 18 | 44 |
P value = 9e-05 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
16Q LOSS MUTATED | 33 | 77 | 6 |
16Q LOSS WILD-TYPE | 153 | 132 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
17P LOSS MUTATED | 111 | 55 | 40 |
17P LOSS WILD-TYPE | 75 | 161 | 51 |
P value = 0.00017 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
17P LOSS MUTATED | 27 | 53 | 66 | 33 |
17P LOSS WILD-TYPE | 65 | 72 | 49 | 66 |
P value = 0.00013 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
17Q LOSS MUTATED | 30 | 10 | 15 |
17Q LOSS WILD-TYPE | 156 | 206 | 76 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
18P LOSS MUTATED | 88 | 55 | 26 |
18P LOSS WILD-TYPE | 98 | 161 | 65 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
18Q LOSS MUTATED | 113 | 68 | 26 |
18Q LOSS WILD-TYPE | 73 | 148 | 65 |
P value = 3e-04 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
18Q LOSS MUTATED | 79 | 39 | 33 | 33 | 20 |
18Q LOSS WILD-TYPE | 59 | 73 | 43 | 73 | 34 |
P value = 0.00017 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
18Q LOSS MUTATED | 39 | 27 | 24 | 43 | 7 | 14 | 24 | 9 | 17 |
18Q LOSS WILD-TYPE | 44 | 30 | 20 | 41 | 39 | 37 | 25 | 9 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
19P LOSS MUTATED | 99 | 74 | 62 |
19P LOSS WILD-TYPE | 87 | 142 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
19P LOSS MUTATED | 26 | 88 | 49 | 37 |
19P LOSS WILD-TYPE | 66 | 37 | 66 | 62 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
19P LOSS MUTATED | 63 | 39 | 42 | 73 | 17 |
19P LOSS WILD-TYPE | 75 | 73 | 34 | 33 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
19P LOSS MUTATED | 29 | 17 | 21 | 50 | 31 | 35 | 33 | 4 | 14 |
19P LOSS WILD-TYPE | 54 | 40 | 23 | 34 | 15 | 16 | 16 | 14 | 40 |
P value = 6e-05 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
19P LOSS MUTATED | 65 | 134 | 31 |
19P LOSS WILD-TYPE | 114 | 97 | 47 |
P value = 3e-05 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
19P LOSS MUTATED | 31 | 24 | 64 | 44 | 54 | 13 |
19P LOSS WILD-TYPE | 40 | 20 | 54 | 93 | 29 | 22 |
P value = 7e-05 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
19P LOSS MUTATED | 68 | 121 | 10 |
19P LOSS WILD-TYPE | 118 | 88 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
19Q LOSS MUTATED | 76 | 39 | 38 |
19Q LOSS WILD-TYPE | 110 | 177 | 53 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
19Q LOSS MUTATED | 14 | 54 | 39 | 23 |
19Q LOSS WILD-TYPE | 78 | 71 | 76 | 76 |
P value = 0.00024 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
19Q LOSS MUTATED | 48 | 23 | 22 | 50 | 10 |
19Q LOSS WILD-TYPE | 90 | 89 | 54 | 56 | 44 |
P value = 2e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
19Q LOSS MUTATED | 20 | 13 | 17 | 35 | 17 | 23 | 20 | 0 | 8 |
19Q LOSS WILD-TYPE | 63 | 44 | 27 | 49 | 29 | 28 | 29 | 18 | 46 |
P value = 0.00021 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
19Q LOSS MUTATED | 38 | 82 | 8 |
19Q LOSS WILD-TYPE | 148 | 127 | 22 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
21Q LOSS MUTATED | 50 | 56 | 51 |
21Q LOSS WILD-TYPE | 136 | 160 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
21Q LOSS MUTATED | 40 | 14 | 30 | 58 | 11 |
21Q LOSS WILD-TYPE | 98 | 98 | 46 | 48 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
21Q LOSS MUTATED | 14 | 8 | 17 | 31 | 11 | 32 | 24 | 4 | 12 |
21Q LOSS WILD-TYPE | 69 | 49 | 27 | 53 | 35 | 19 | 25 | 14 | 42 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
21Q LOSS MUTATED | 16 | 18 | 42 | 30 | 41 | 7 |
21Q LOSS WILD-TYPE | 55 | 26 | 76 | 107 | 42 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 216 | 91 |
22Q LOSS MUTATED | 94 | 60 | 58 |
22Q LOSS WILD-TYPE | 92 | 156 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 125 | 115 | 99 |
22Q LOSS MUTATED | 18 | 70 | 61 | 38 |
22Q LOSS WILD-TYPE | 74 | 55 | 54 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 138 | 112 | 76 | 106 | 54 |
22Q LOSS MUTATED | 70 | 30 | 34 | 63 | 11 |
22Q LOSS WILD-TYPE | 68 | 82 | 42 | 43 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 | CLUS_9 |
---|---|---|---|---|---|---|---|---|---|
ALL | 83 | 57 | 44 | 84 | 46 | 51 | 49 | 18 | 54 |
22Q LOSS MUTATED | 47 | 14 | 20 | 40 | 14 | 34 | 24 | 4 | 11 |
22Q LOSS WILD-TYPE | 36 | 43 | 24 | 44 | 32 | 17 | 25 | 14 | 43 |
P value = 0.00021 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 179 | 231 | 78 |
22Q LOSS MUTATED | 56 | 119 | 33 |
22Q LOSS WILD-TYPE | 123 | 112 | 45 |
P value = 0.00012 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 71 | 44 | 118 | 137 | 83 | 35 |
22Q LOSS MUTATED | 22 | 25 | 63 | 44 | 44 | 10 |
22Q LOSS WILD-TYPE | 49 | 19 | 55 | 93 | 39 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 186 | 209 | 30 |
22Q LOSS MUTATED | 60 | 115 | 8 |
22Q LOSS WILD-TYPE | 126 | 94 | 22 |
-
Copy number data file = transformed.cor.cli.txt
-
Molecular subtypes file = LUAD-TP.transferedmergedcluster.txt
-
Number of patients = 493
-
Number of significantly arm-level cnvs = 80
-
Number of molecular subtypes = 12
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.