Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	166 (30%)	396	0.26087	1	0.047625	1	0.33874	1	0.077823	1	0.20974	1	0.29701	1	0.84907	1	0.46198	1
1q gain	216 (38%)	346	0.64582	1	0.00041293	0.256	0.26518	1	0.033012	1	1	1	1	1	0.67081	1	0.7443	1
2p gain	176 (31%)	386	0.11746	1	9.3848e-06	0.00587	1	1	0.52402	1	1	1	0.83722	1	0.7692	1	1	1
2q gain	148 (26%)	414	0.11526	1	0.00094691	0.582	1	1	0.87065	1	0.17103	1	1	1	0.51497	1	0.7042	1
3p gain	154 (27%)	408	0.57024	1	0.00076663	0.473	0.72326	1	0.70716	1	0.56548	1	0.2181	1	0.23859	1	0.46087	1
3q gain	265 (47%)	297	0.55691	1	3.6981e-08	2.33e-05	0.1746	1	0.72939	1	0.2511	1	0.76006	1	0.48476	1	0.52168	1
4p gain	57 (10%)	505	0.053637	1	0.033458	1	0.34781	1	0.43269	1	0.27489	1	0.40998	1	0.29325	1	0.26447	1
4q gain	32 (6%)	530	0.2429	1	0.072111	1	1	1	0.48133	1	0.16155	1	NA	NA	0.58368	1	0.4707	1
5p gain	193 (34%)	369	0.43161	1	0.0024156	1	0.11549	1	0.24307	1	1	1	0.053679	1	0.41839	1	1	1
5q gain	59 (10%)	503	0.90851	1	0.14092	1	0.35547	1	0.36172	1	1	1	0.12172	1	0.89875	1	1	1
6p gain	163 (29%)	399	0.29935	1	2.0744e-05	0.0129	0.74659	1	0.10346	1	0.56018	1	1	1	0.1971	1	0.72916	1
6q gain	96 (17%)	466	0.43247	1	0.00025625	0.159	1	1	0.18686	1	1	1	0.73998	1	0.19603	1	0.67605	1
7p gain	178 (32%)	384	0.9551	1	0.00049317	0.305	0.37907	1	0.038308	1	0.55518	1	1	1	0.055369	1	0.17487	1
7q gain	193 (34%)	369	0.44483	1	0.0028591	1	0.79779	1	0.047906	1	0.55469	1	0.57272	1	0.01446	1	1	1
8p gain	116 (21%)	446	0.77819	1	0.94451	1	0.60847	1	0.84538	1	0.5009	1	0.66604	1	0.50687	1	1	1
8q gain	236 (42%)	326	0.36021	1	0.11837	1	0.32861	1	0.64428	1	1	1	0.073189	1	0.16389	1	0.52744	1
9p gain	88 (16%)	474	0.46357	1	0.83536	1	1	1	0.21953	1	0.40063	1	1	1	0.60508	1	0.36996	1
9q gain	43 (8%)	519	0.69831	1	0.22074	1	1	1	0.49643	1	0.21277	1	1	1	0.1756	1	1	1
10p gain	181 (32%)	381	0.36462	1	3.5705e-08	2.25e-05	0.10254	1	0.38911	1	0.24395	1	0.66327	1	0.36848	1	0.50853	1
10q gain	105 (19%)	457	0.68542	1	0.0020172	1	0.16323	1	0.88437	1	1	1	1	1	0.54826	1	0.69617	1
11p gain	75 (13%)	487	0.11584	1	0.56667	1	1	1	0.47239	1	0.34984	1	NA	NA	0.22447	1	1	1
11q gain	111 (20%)	451	0.94497	1	0.95263	1	1	1	0.31655	1	1	1	0.57774	1	0.98139	1	0.21858	1
12p gain	249 (44%)	313	0.29766	1	8.1975e-10	5.17e-07	0.34924	1	0.04202	1	1	1	0.57397	1	0.51058	1	0.32648	1
12q gain	173 (31%)	389	0.15646	1	6.635e-08	4.17e-05	0.085749	1	0.013669	1	1	1	0.66292	1	0.01946	1	0.46198	1
13q gain	60 (11%)	502	0.68037	1	0.008556	1	1	1	0.48194	1	0.28776	1	0.6733	1	0.63992	1	0.61432	1
14q gain	57 (10%)	505	0.060875	1	0.26611	1	1	1	0.77072	1	0.028384	1	0.72034	1	0.89651	1	0.6079	1
15q gain	38 (7%)	524	0.16877	1	0.77875	1	1	1	0.10007	1	1	1	NA	NA	1	1	1	1
16p gain	58 (10%)	504	0.90251	1	0.2562	1	1	1	0.035835	1	1	1	0.27742	1	0.90046	1	1	1
16q gain	30 (5%)	532	0.81745	1	0.73785	1	1	1	0.12982	1	1	1	0.37751	1	1	1	1	1
17p gain	22 (4%)	540	0.16988	1	0.45889	1	1	1	0.93554	1	1	1	NA	NA	0.32345	1	1	1
17q gain	49 (9%)	513	0.81783	1	0.45664	1	1	1	0.43269	1	1	1	0.0068799	1	0.2945	1	1	1
18p gain	117 (21%)	445	0.14664	1	0.042527	1	1	1	0.69196	1	1	1	0.81312	1	0.98254	1	1	1
18q gain	71 (13%)	491	0.32629	1	0.47929	1	1	1	0.70362	1	1	1	0.72265	1	0.83212	1	0.61671	1
19p gain	165 (29%)	397	0.48968	1	0.075898	1	0.75019	1	0.69196	1	1	1	1	1	0.37845	1	0.72979	1
19q gain	159 (28%)	403	0.64998	1	0.012532	1	0.15461	1	0.76198	1	0.19436	1	0.85733	1	0.04652	1	0.73356	1
20p gain	280 (50%)	282	0.018459	1	1.2902e-06	0.000808	0.74616	1	0.1413	1	0.62299	1	0.86868	1	0.24975	1	0.75151	1
20q gain	317 (56%)	245	0.059133	1	2.4231e-05	0.0151	0.75719	1	0.309	1	1	1	1	1	0.019	1	0.5214	1
21q gain	109 (19%)	453	0.99881	1	0.00094138	0.58	0.072109	1	0.36778	1	1	1	0.57435	1	0.90301	1	0.69106	1
22q gain	25 (4%)	537	0.050641	1	0.64552	1	0.16856	1	0.42646	1	1	1	1	1	0.73994	1	1	1
xq gain	104 (19%)	458	0.66297	1	0.12752	1	0.069489	1	0.78373	1	1	1	1	1	0.73841	1	1	1
1p loss	60 (11%)	502	0.91227	1	0.34676	1	1	1	0.31439	1	0.28776	1	1	1	0.69459	1	0.27643	1
1q loss	39 (7%)	523	0.88519	1	0.50403	1	1	1	0.45895	1	0.19439	1	NA	NA	0.47912	1	0.48783	1
2p loss	53 (9%)	509	0.92833	1	0.40564	1	1	1	0.13124	1	1	1	NA	NA	1	1	0.60703	1
2q loss	59 (10%)	503	0.98816	1	0.014284	1	0.36012	1	0.13124	1	1	1	1	1	0.76826	1	0.6079	1
3p loss	93 (17%)	469	0.99453	1	0.015242	1	0.52285	1	0.48469	1	0.41944	1	0.03833	1	0.55465	1	1	1
3q loss	41 (7%)	521	0.3779	1	0.18856	1	0.26423	1	0.80274	1	0.20362	1	NA	NA	0.72825	1	0.53627	1
4p loss	308 (55%)	254	0.49056	1	0.96743	1	0.16726	1	0.15542	1	1	1	0.65973	1	0.61767	1	1	1
4q loss	352 (63%)	210	0.42897	1	0.7407	1	0.77839	1	0.84167	1	1	1	0.64448	1	0.51568	1	0.32587	1
5p loss	127 (23%)	435	0.80843	1	0.051096	1	0.64455	1	0.062043	1	1	1	0.742	1	0.63961	1	0.70247	1
5q loss	216 (38%)	346	0.4331	1	0.025132	1	1	1	0.17162	1	1	1	0.77799	1	0.86256	1	0.52177	1
6p loss	162 (29%)	400	0.21429	1	0.093879	1	0.74465	1	0.97034	1	1	1	0.49357	1	0.51023	1	0.72917	1
6q loss	235 (42%)	327	0.66703	1	0.092021	1	0.14865	1	0.66812	1	1	1	1	1	0.072169	1	0.52294	1
7p loss	117 (21%)	445	0.82515	1	0.90671	1	0.60822	1	0.069382	1	1	1	0.35703	1	0.70794	1	0.69446	1
7q loss	81 (14%)	481	0.29007	1	0.22593	1	0.46968	1	0.10007	1	0.37362	1	0.47357	1	0.3195	1	0.36941	1
8p loss	267 (48%)	295	0.15883	1	0.026246	1	0.17428	1	0.081273	1	1	1	0.34063	1	0.91873	1	0.5214	1
8q loss	87 (15%)	475	0.095114	1	0.0056434	1	1	1	0.17933	1	1	1	0.73961	1	0.74658	1	0.64403	1
9p loss	255 (45%)	307	0.80866	1	0.013278	1	0.45529	1	0.28108	1	0.59296	1	0.38059	1	0.89249	1	0.5232	1
9q loss	280 (50%)	282	0.40331	1	8.0635e-07	0.000506	0.49312	1	0.92795	1	0.62299	1	0.86776	1	0.50358	1	1	1
10p loss	93 (17%)	469	0.39872	1	0.14874	1	1	1	0.8856	1	0.41944	1	0.62143	1	0.37065	1	1	1
10q loss	122 (22%)	440	0.87849	1	0.077755	1	0.61984	1	0.98142	1	0.010033	1	1	1	0.51054	1	0.69334	1
11p loss	191 (34%)	371	0.97559	1	0.0038576	1	1	1	0.83686	1	1	1	0.65494	1	0.68865	1	0.72941	1
11q loss	144 (26%)	418	0.66152	1	0.033415	1	0.27399	1	0.14796	1	1	1	0.60095	1	0.56789	1	0.7042	1
12p loss	77 (14%)	485	0.80735	1	0.091547	1	1	1	0.32186	1	1	1	1	1	0.14007	1	1	1
12q loss	102 (18%)	460	0.34578	1	0.33998	1	1	1	0.98909	1	1	1	1	1	0.83091	1	1	1
13q loss	298 (53%)	264	0.50392	1	0.69439	1	0.75018	1	0.95173	1	0.60298	1	0.64481	1	0.46247	1	0.52412	1
14q loss	206 (37%)	356	0.5965	1	0.0010281	0.631	0.78262	1	0.78683	1	0.30219	1	0.63111	1	0.36016	1	0.18218	1
15q loss	272 (48%)	290	0.40576	1	0.000214	0.133	0.47985	1	0.77693	1	0.61265	1	0.75246	1	0.56147	1	0.5252	1
16p loss	322 (57%)	240	0.40171	1	0.076548	1	0.75844	1	0.8769	1	0.26466	1	0.87102	1	0.39754	1	0.10017	1
16q loss	400 (71%)	162	0.15304	1	1.8555e-05	0.0116	0.74761	1	0.18711	1	0.56068	1	0.66355	1	0.86187	1	0.1595	1
17p loss	466 (83%)	96	0.81215	1	0.34569	1	0.52565	1	0.93972	1	0.43053	1	0.095509	1	0.90665	1	0.38305	1
17q loss	372 (66%)	190	0.54443	1	0.57317	1	0.79768	1	0.0064672	1	0.55444	1	0.061549	1	0.78774	1	0.097962	1
18p loss	230 (41%)	332	0.08298	1	0.99777	1	0.76497	1	0.99511	1	0.068016	1	0.872	1	0.093619	1	1	1
18q loss	286 (51%)	276	0.12494	1	0.26634	1	0.4957	1	0.98073	1	0.2489	1	1	1	0.15871	1	0.21333	1
19p loss	180 (32%)	382	0.17076	1	0.016466	1	0.19278	1	0.89292	1	1	1	0.30714	1	0.63213	1	0.7343	1
19q loss	170 (30%)	392	0.77442	1	0.38018	1	0.17174	1	0.28108	1	0.55726	1	0.16507	1	0.57637	1	0.50289	1
20p loss	48 (9%)	514	0.091719	1	0.33915	1	1	1	0.36897	1	0.23535	1	NA	NA	0.73239	1	0.22888	1
20q loss	31 (6%)	531	0.14172	1	0.97842	1	1	1	0.42646	1	1	1	NA	NA	1	1	0.4707	1
21q loss	190 (34%)	372	0.78853	1	0.32427	1	0.40475	1	0.47998	1	1	1	1	1	0.30307	1	1	1
22q loss	419 (75%)	143	0.15508	1	0.11629	1	0.27208	1	0.67747	1	0.57444	1	0.062509	1	0.90158	1	1	1
xq loss	270 (48%)	292	0.77432	1	0.0023468	1	0.74925	1	0.80499	1	0.11025	1	0.86776	1	0.15613	1	0.75739	1