Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		MIR_CNMF		MIR_CHIERARCHICAL		CN_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
TP53	273 (86%)	43	0.9556	1	0.087479	1	0.5353	1	0.91974	1	0.32464	1	0.20957	1	0.22817	1	0.86928	1	0.41396	1	0.39021	1	0.58023	1	0.1829	1	0.71433	1
BRCA1	12 (4%)	304	0.20215	1	0.42644	1	0.25524	1	0.38784	1	0.53298	1	0.48845	1	0.19046	1	1	1	0.88078	1	0.71699	1	0.26022	1	0.31461	1	0.65738	1
FAM86B2	6 (2%)	310	0.45408	1	0.44488	1	0.22223	1	0.58656	1	0.87507	1	1	1	0.069169	1	NA	NA	NA	NA	0.3817	1	0.7052	1	0.35222	1	0.21598	1
TBP	4 (1%)	312	1	1	1	1	0.69072	1	0.086109	1	0.03558	1	0.13163	1	0.86498	1	1	1	1	1	0.68785	1	1	1	1	1	0.83986	1
NBPF10	4 (1%)	312	0.83654	1	0.80389	1	0.23194	1	0.78095	1	0.83891	1	0.52965	1	0.3375	1	0.10298	1	1	1	0.82009	1	0.45521	1	0.824	1	0.68362	1
NF1	14 (4%)	302	0.37276	1	0.30758	1	0.83811	1	0.16312	1	0.58193	1	0.11327	1	0.22098	1	0.43223	1	0.03119	1	0.73724	1	0.52989	1	0.64053	1	0.14748	1
C10ORF140	5 (2%)	311	0.30832	1	0.062889	1	0.8673	1	0.90746	1	0.37792	1	0.58868	1	0.59334	1	NA	NA	NA	NA	0.1339	1	0.49702	1	0.050069	1	0.21593	1
BRCA2	11 (3%)	305	0.46818	1	0.91913	1	0.92853	1	0.6277	1	0.68934	1	0.66713	1	0.52526	1	0.23765	1	0.48448	1	1	1	0.63323	1	1	1	0.71655	1
CDK12	8 (3%)	308	0.063919	1	0.26279	1	0.3112	1	0.79284	1	1	1	0.59791	1	0.04154	1	0.3642	1	1	1	0.73359	1	0.50969	1	0.90418	1	0.72858	1
OR4F21	3 (1%)	313	0.62697	1	1	1	0.63363	1	0.90046	1	1	1	1	1	0.19197	1	NA	NA	NA	NA	0.78729	1	0.69425	1	0.79977	1	1	1
C9ORF171	5 (2%)	311	0.00108	0.241	0.00463	1	0.3935	1	0.31472	1	1	1	0.39682	1	0.68863	1	NA	NA	NA	NA	0.38413	1	0.49537	1	0.20853	1	0.056859	1
HYDIN	11 (3%)	305	0.58008	1	0.03645	1	0.21417	1	0.428	1	0.64179	1	0.84621	1	0.28354	1	1	1	1	1	0.7823	1	0.69405	1	0.50282	1	0.71769	1
RB1	8 (3%)	308	0.90054	1	0.23142	1	0.44923	1	0.44138	1	0.60245	1	1	1	0.90695	1	NA	NA	NA	NA	0.60358	1	0.69635	1	0.65233	1	0.53039	1
GART	3 (1%)	313	1	1	0.57024	1	0.63435	1	0.38682	1	0.064089	1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
SRC	4 (1%)	312	0.83699	1	1	1	0.5655	1	0.25051	1	0.16219	1	NA	NA	NA	NA	NA	NA	NA	NA	0.482	1	0.61005	1	0.60405	1	0.79757	1
ZNF236	7 (2%)	309	1	1	1	1	0.80347	1	0.31357	1	0.50942	1	0.313	1	0.75025	1	NA	NA	NA	NA	0.21519	1	0.0245	1	0.27948	1	0.14986	1
NBPF16	4 (1%)	312	0.56775	1	1	1	0.23432	1	0.087029	1	0.2729	1	0.40855	1	0.333	1	0.17608	1	1	1	0.22733	1	0.3083	1	0.28076	1	0.27224	1
CYP11B1	7 (2%)	309	0.02474	1	0.36205	1	0.5706	1	0.32101	1	0.89364	1	0.59364	1	0.15036	1	0.72311	1	1	1	0.37898	1	0.86549	1	0.79397	1	0.89062	1
SON	8 (3%)	308	0.3904	1	0.42766	1	1	1	0.64704	1	0.11273	1	0.13352	1	0.19365	1	0.46763	1	0.77304	1	0.77072	1	0.65543	1	0.57999	1	0.51497	1