Clinical Features CN_CNMF METHLYATION_CNMF MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q HRAS 18 (10%) 160 9.9999e-06 0.00071 5e-05 0.00325 9.9999e-06 0.00071 9.9999e-06 0.00071 0.00011 0.00693 0.00029 0.0174 2e-05 0.00134 9.9999e-06 0.00071 EPAS1 8 (4%) 170 0.058719 1 0.0066099 0.33 0.00147 0.0838 0.00167 0.0935 0.002 0.11 0.01688 0.81 0.00025 0.0152 0.00429 0.232 NF1 15 (8%) 163 0.34822 1 0.00050999 0.0296 0.0096699 0.474 9.9999e-05 0.0064 0.00018 0.0112 0.0056999 0.293 2e-05 0.00134 0.00042 0.0248 RET 6 (3%) 172 0.1488 1 0.48177 1 0.090449 1 0.10432 1 0.43343 1 0.068409 1 0.43808 1 0.04293 1 CSDE1 4 (2%) 174 0.10679 1 0.58174 1 0.48945 1 0.0051099 0.271 0.35048 1 0.0056399 0.293 0.36319 1 0.04583 1 GPR128 4 (2%) 174 0.14481 1 0.098579 1 0.8877 1 0.8871 1 0.54185 1 0.77355 1 0.56737 1 0.55057 1 AMMECR1 3 (2%) 175 0.73774 1 1 1 0.24214 1 0.62615 1 0.79515 1 1 1 0.26145 1 0.799 1 SHROOM4 3 (2%) 175 NA NA 1 1 0.4672 1 0.54114 1 1 1 0.6786 1 1 1 1 1 FAM83D 3 (2%) 175 0.26082 1 0.33666 1 0.40469 1 0.46499 1 0.057749 1 0.81885 1 0.18186 1 0.04754 1