name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-OR-A5J1-01A-11D-A29I-10	57	56	1	34	1.754386e-02	coding only	1	28836904	...	21	28	54	7.282335e-07	9.709780e-07	1.872600e-06	-5.727555e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5J2-01A-11D-A29I-10	104	103	1	69	9.615385e-03	coding only	1	28836904	...	33	54	96	1.144367e-06	1.872600e-06	3.329068e-06	-5.477677e+00	...	9	28780708	...	3.127095e-07
TCGA-OR-A5J3-01A-11D-A29I-10	103	101	2	62	1.941748e-02	coding only	1	28836904	...	34	53	89	1.179045e-06	1.837923e-06	3.086323e-06	-5.510559e+00	...	2	28780708	...	6.949099e-08
TCGA-OR-A5J4-01A-11D-A29I-10	221	220	1	161	4.524887e-03	coding only	1	28836904	...	56	137	205	1.941956e-06	4.750857e-06	7.108946e-06	-5.148195e+00	...	12	28780708	...	4.169460e-07
TCGA-OR-A5J5-01A-11D-A29I-10	687	681	6	484	8.733624e-03	coding only	1	28836904	...	191	388	640	6.623457e-06	1.345498e-05	2.219378e-05	-4.653769e+00	...	60	28780708	...	2.084730e-06
TCGA-OR-A5J6-01A-31D-A29I-10	152	150	2	85	1.315789e-02	coding only	1	28836904	...	60	73	140	2.080667e-06	2.531478e-06	4.854890e-06	-5.313821e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5J7-01A-11D-A29I-10	124	122	2	81	1.612903e-02	coding only	1	28836904	...	37	66	113	1.283078e-06	2.288734e-06	3.918590e-06	-5.406870e+00	...	10	28780708	...	3.474550e-07
TCGA-OR-A5J8-01A-11D-A29I-10	225	220	5	151	2.222222e-02	coding only	1	28836904	...	64	131	202	2.219378e-06	4.542790e-06	7.004913e-06	-5.154597e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5JA-01A-11D-A29I-10	768	762	6	608	7.812500e-03	coding only	1	28836904	...	137	556	704	4.750857e-06	1.928085e-05	2.441316e-05	-4.612376e+00	...	10	28780708	...	3.474550e-07
TCGA-OR-A5JB-01A-11D-A29I-10	477	471	6	335	1.257862e-02	coding only	1	28836904	...	123	301	441	4.265368e-06	1.043801e-05	1.529290e-05	-4.815510e+00	...	16	28780708	...	5.559280e-07
TCGA-OR-A5JC-01A-11D-A29I-10	106	105	1	63	9.433962e-03	coding only	1	28836904	...	39	57	99	1.352434e-06	1.976634e-06	3.433101e-06	-5.464313e+00	...	3	28780708	...	1.042365e-07
TCGA-OR-A5JD-01A-11D-A29I-10	92	91	1	55	1.086957e-02	coding only	1	28836904	...	35	43	82	1.213723e-06	1.491145e-06	2.843578e-06	-5.546135e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5JF-01A-11D-A29I-10	173	170	3	116	1.734104e-02	coding only	1	28836904	...	52	102	159	1.803245e-06	3.537134e-06	5.513768e-06	-5.258552e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5JH-01A-11D-A30A-10	76	74	2	40	2.631579e-02	coding only	1	28836904	...	31	34	68	1.075011e-06	1.179045e-06	2.358089e-06	-5.627440e+00	...	3	28780708	...	1.042365e-07
TCGA-OR-A5JI-01A-11D-A29I-10	81	79	2	52	2.469136e-02	coding only	1	28836904	...	27	40	70	9.363002e-07	1.387111e-06	2.427445e-06	-5.614851e+00	...	3	28780708	...	1.042365e-07
TCGA-OR-A5JK-01A-11D-A29I-10	115	113	2	70	1.739130e-02	coding only	1	28836904	...	40	61	105	1.387111e-06	2.115345e-06	3.641168e-06	-5.438759e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5JL-01A-11D-A29I-10	112	110	2	69	1.785714e-02	coding only	1	28836904	...	36	58	102	1.248400e-06	2.011312e-06	3.537134e-06	-5.451348e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5JP-01A-11D-A29I-10	188	185	3	129	1.595745e-02	coding only	1	28836904	...	50	103	169	1.733889e-06	3.571812e-06	5.860546e-06	-5.232062e+00	...	14	28780708	...	4.864370e-07
TCGA-OR-A5JQ-01A-11D-A29I-10	97	94	3	51	3.092784e-02	coding only	1	28836904	...	39	47	88	1.352434e-06	1.629856e-06	3.051645e-06	-5.515466e+00	...	2	28780708	...	6.949099e-08
TCGA-OR-A5JR-01A-11D-A29I-10	80	79	1	40	1.250000e-02	coding only	1	28836904	...	38	31	72	1.317756e-06	1.075011e-06	2.496801e-06	-5.602616e+00	...	3	28780708	...	1.042365e-07
TCGA-OR-A5JT-01A-11D-A29I-10	90	90	0	60	0	coding only	1	28836904	...	27	53	86	9.363002e-07	1.837923e-06	2.982290e-06	-5.525450e+00	...	6	28780708	...	2.084730e-07
TCGA-OR-A5JV-01A-11D-A29I-10	81	80	1	51	1.234568e-02	coding only	1	28836904	...	27	45	73	9.363002e-07	1.560500e-06	2.531478e-06	-5.596626e+00	...	1	28780708	...	3.474550e-08
TCGA-OR-A5JW-01A-11D-A29I-10	125	120	5	80	4.000000e-02	exome+100bp flanks	2	35888610	...	37	68	108	1.030968e-06	1.894752e-06	3.009311e-06	-5.521533e+00	...	3	32165000	...	9.326908e-08
TCGA-OR-A5JX-01A-11D-A29I-10	120	118	2	79	1.666667e-02	coding only	1	28836904	...	37	68	109	1.283078e-06	2.358089e-06	3.779879e-06	-5.422522e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5JY-01A-31D-A29I-10	159	156	3	111	1.886792e-02	coding only	1	28836904	...	42	97	145	1.456467e-06	3.363745e-06	5.028279e-06	-5.298581e+00	...	6	28780708	...	2.084730e-07
TCGA-OR-A5K2-01A-11D-A29I-10	211	208	3	119	1.421801e-02	coding only	1	28836904	...	81	104	192	2.808901e-06	3.606490e-06	6.658135e-06	-5.176647e+00	...	5	28780708	...	1.737275e-07
TCGA-OR-A5K4-01A-11D-A29I-10	409	404	5	272	1.222494e-02	coding only	1	28836904	...	126	252	380	4.369401e-06	8.738802e-06	1.317756e-05	-4.880165e+00	...	2	28780708	...	6.949099e-08
TCGA-OR-A5K5-01A-11D-A29I-10	226	223	3	171	1.327434e-02	coding only	1	28836904	...	51	144	215	1.768567e-06	4.993601e-06	7.455724e-06	-5.127510e+00	...	19	28780708	...	6.601644e-07
TCGA-OR-A5K8-01A-11D-A29I-10	107	107	0	74	0	coding only	1	28836904	...	29	62	98	1.005656e-06	2.150023e-06	3.398423e-06	-5.468723e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5K9-01A-11D-A29I-10	290	286	4	194	1.379310e-02	coding only	1	28836904	...	85	169	270	2.947612e-06	5.860546e-06	9.363002e-06	-5.028585e+00	...	14	28780708	...	4.864370e-07
TCGA-OR-A5KB-01A-11D-A30A-10	2634	2606	28	1963	1.063022e-02	coding only	1	28836904	...	601	1758	2445	2.084135e-05	6.096355e-05	8.478719e-05	-4.071670e+00	...	82	28780708	...	2.849131e-06
TCGA-OR-A5KO-01A-11D-A29I-10	167	166	1	92	5.988024e-03	coding only	1	28836904	...	66	77	149	2.288734e-06	2.670190e-06	5.166990e-06	-5.286762e+00	...	6	28780708	...	2.084730e-07
TCGA-OR-A5KP-01A-11D-A30A-10	162	161	1	109	6.172840e-03	coding only	1	28836904	...	48	83	148	1.664534e-06	2.878256e-06	5.132312e-06	-5.289687e+00	...	17	28780708	...	5.906734e-07
TCGA-OR-A5KS-01A-11D-A30A-10	142	141	1	87	7.042254e-03	coding only	1	28836904	...	52	71	136	1.803245e-06	2.462123e-06	4.716179e-06	-5.326410e+00	...	13	28780708	...	4.516915e-07
TCGA-OR-A5KT-01A-11D-A29I-10	90	87	3	53	3.333333e-02	coding only	1	28836904	...	33	45	82	1.144367e-06	1.560500e-06	2.843578e-06	-5.546135e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5KU-01A-11D-A29I-10	123	118	5	74	4.065041e-02	exome+100bp flanks	2	35888610	...	40	60	103	1.114560e-06	1.671840e-06	2.869991e-06	-5.542119e+00	...	3	32165000	...	9.326908e-08
TCGA-OR-A5KV-01A-11D-A29I-10	118	118	0	79	0	coding only	1	28836904	...	35	60	101	1.213723e-06	2.080667e-06	3.502456e-06	-5.455627e+00	...	6	28780708	...	2.084730e-07
TCGA-OR-A5KW-01A-11D-A29I-10	112	111	1	72	8.928571e-03	coding only	1	28836904	...	36	52	98	1.248400e-06	1.803245e-06	3.398423e-06	-5.468723e+00	...	10	28780708	...	3.474550e-07
TCGA-OR-A5KX-01A-11D-A29I-10	122	116	6	76	4.918033e-02	exome+100bp flanks	2	35888610	...	40	54	110	1.114560e-06	1.504656e-06	3.065039e-06	-5.513564e+00	...	15	32165000	...	4.663454e-07
TCGA-OR-A5KZ-01A-11D-A29I-10	103	102	1	69	9.708738e-03	coding only	1	28836904	...	30	48	88	1.040334e-06	1.664534e-06	3.051645e-06	-5.515466e+00	...	10	28780708	...	3.474550e-07
TCGA-OR-A5L1-01A-11D-A30A-10	81	80	1	43	1.234568e-02	coding only	1	28836904	...	34	33	69	1.179045e-06	1.144367e-06	2.392767e-06	-5.621100e+00	...	2	28780708	...	6.949099e-08
TCGA-OR-A5L2-01A-11D-A30A-10	262	260	2	180	7.633588e-03	coding only	1	28836904	...	77	159	245	2.670190e-06	5.513768e-06	8.496058e-06	-5.070783e+00	...	9	28780708	...	3.127095e-07
TCGA-OR-A5L3-01A-11D-A29I-10	103	101	2	59	1.941748e-02	coding only	1	28836904	...	37	50	94	1.283078e-06	1.733889e-06	3.259712e-06	-5.486821e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5L4-01A-11D-A29I-10	89	85	4	59	4.494382e-02	coding only	1	28836904	...	25	48	81	8.669447e-07	1.664534e-06	2.808901e-06	-5.551464e+00	...	7	28780708	...	2.432185e-07
TCGA-OR-A5L5-01A-11D-A29I-10	131	130	1	75	7.633588e-03	coding only	1	28836904	...	46	66	115	1.595178e-06	2.288734e-06	3.987945e-06	-5.399251e+00	...	2	28780708	...	6.949099e-08
TCGA-OR-A5L6-01A-11D-A29I-10	122	121	1	81	8.196721e-03	coding only	1	28836904	...	34	68	107	1.179045e-06	2.358089e-06	3.710523e-06	-5.430565e+00	...	5	28780708	...	1.737275e-07
TCGA-OR-A5L9-01A-11D-A29I-10	100	98	2	67	2.000000e-02	coding only	1	28836904	...	29	50	91	1.005656e-06	1.733889e-06	3.155679e-06	-5.500907e+00	...	12	28780708	...	4.169460e-07
TCGA-OR-A5LA-01A-11D-A29I-10	76	73	3	50	3.947368e-02	coding only	1	28836904	...	22	42	68	7.629113e-07	1.456467e-06	2.358089e-06	-5.627440e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5LB-01A-11D-A29I-10	387	378	9	294	2.325581e-02	coding only	1	28836904	...	75	204	362	2.600834e-06	7.074268e-06	1.255336e-05	-4.901240e+00	...	79	28780708	...	2.744894e-06
TCGA-OR-A5LC-01A-11D-A29I-10	155	154	1	97	6.451613e-03	coding only	1	28836904	...	53	84	142	1.837923e-06	2.912934e-06	4.924246e-06	-5.307660e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5LD-01A-11D-A29I-10	122	118	4	83	3.278689e-02	coding only	1	28836904	...	32	67	108	1.109689e-06	2.323412e-06	3.745201e-06	-5.426525e+00	...	8	28780708	...	2.779640e-07
TCGA-OR-A5LJ-01A-11D-A29I-10	719	711	8	502	1.112656e-02	coding only	1	28836904	...	193	391	678	6.692813e-06	1.355901e-05	2.351154e-05	-4.628719e+00	...	91	28780708	...	3.161840e-06
TCGA-OR-A5LK-01A-11D-A29I-10	138	135	3	89	2.173913e-02	coding only	1	28836904	...	41	74	120	1.421789e-06	2.566156e-06	4.161334e-06	-5.380767e+00	...	5	28780708	...	1.737275e-07
TCGA-OR-A5LL-01A-11D-A29I-10	105	104	1	77	9.523810e-03	coding only	1	28836904	...	26	68	100	9.016224e-07	2.358089e-06	3.467779e-06	-5.459949e+00	...	6	28780708	...	2.084730e-07
TCGA-OR-A5LO-01A-11D-A29I-10	179	176	3	116	1.675978e-02	coding only	1	28836904	...	53	100	161	1.837923e-06	3.467779e-06	5.583124e-06	-5.253123e+00	...	8	28780708	...	2.779640e-07
TCGA-OR-A5LP-01A-11D-A29I-10	94	94	0	59	0	coding only	1	28836904	...	34	51	89	1.179045e-06	1.768567e-06	3.086323e-06	-5.510559e+00	...	4	28780708	...	1.389820e-07
TCGA-OR-A5LR-01A-11D-A29I-10	67	66	1	42	1.492537e-02	coding only	1	28836904	...	21	37	60	7.282335e-07	1.283078e-06	2.080667e-06	-5.681797e+00	...	2	28780708	...	6.949099e-08
TCGA-P6-A5OF-01A-11D-A29I-10	85	85	0	53	0	coding only	1	28836904	...	32	40	78	1.109689e-06	1.387111e-06	2.704867e-06	-5.567854e+00	...	6	28780708	...	2.084730e-07
TCGA-P6-A5OH-01A-11D-A30A-10	291	290	1	204	3.436426e-03	coding only	1	28836904	...	82	166	271	2.843578e-06	5.756513e-06	9.397680e-06	-5.026979e+00	...	23	28780708	...	7.991464e-07
TCGA-PA-A5YG-01A-11D-A29I-10	54	53	1	43	1.851852e-02	coding only	1	28836904	...	9	37	49	3.121001e-07	1.283078e-06	1.699212e-06	-5.769753e+00	...	3	28780708	...	1.042365e-07
TCGA-PK-A5H8-01A-11D-A29I-10	78	77	1	49	1.282051e-02	coding only	1	28836904	...	26	37	69	9.016224e-07	1.283078e-06	2.392767e-06	-5.621100e+00	...	6	28780708	...	2.084730e-07
TCGA-PK-A5HB-01A-11D-A29I-10	1587	1572	15	1134	9.451796e-03	coding only	1	28836904	...	424	917	1492	1.470338e-05	3.179953e-05	5.173926e-05	-4.286180e+00	...	144	28780708	...	5.003352e-06
