gene1	gene2	pval	qval
PIK3CA	14q-Del	0.000107	1
PIK3CA	Amp_19q12	0.000107	1
Amp_10p15.1	Del_16q24.3	0.000128	1
PIK3CA	Del_5q11.2	0.000176	1
CDH1	Del_3p21.31	0.000186	1
Amp_19q12	Del_16q24.3	0.000219	1
PIK3CA	Del_2q37.3	0.000224	1
PIK3CA	Del_5q21.3	0.000232	1
PIK3CA	Del_13q14.2	0.000242	1
16q-Del	Amp_10p15.1	0.000243	1
PIK3CA	Amp_12p13.33	0.000267	1
CDH1	Amp_17q23.1	0.000294	1
CDH1	Del_8p23.2	0.000333	1
CDH1	Del_9p23	0.00034	1
CDH1	20p-Amp	0.000359	1
CDH1	Amp_17q12	0.000377	1
PIK3CA	Amp_6p23	0.000383	1
CDH1	Del_4p16.3	0.000423	1
CDH1	Del_5q11.2	0.000423	1
Amp_3q26.32	Del_16q24.3	0.000448	1
PIK3CA	8q-Amp	0.000469	1
Amp_12p13.33	Del_16q24.3	0.000471	1
TP53	Del_6q15	0.000472	1
TP53	Del_1p22.1	0.000553	1
TP53	22q-Del	0.000556	1
CDH1	Del_19p13.3	0.000569	1
CDH1	Del_11p15.5	0.000698	1
CDH1	Amp_15q26.3	0.000787	1
NCOR1	Del_6q15	0.000864	1
PIK3CA	5q-Del	0.000909	1
CDH1	Del_10q26.3	0.000988	1
CDH1	Del_2q37.3	0.000989	1
CDH1	4p-Del	0.0011	1
MAP3K1	Amp_6p23	0.00119	1
CDH1	5q-Del	0.00128	1
20p-Amp	Del_20p13	0.00156	1
16p-Amp	17p-Del	0.00162	1
PIK3CA	Del_9q34.2	0.00203	1
CDH1	Amp_13q34	0.00207	1
PIK3CA	Del_9q21.11	0.00212	1
PIK3CA	Del_4p16.3	0.00223	1
TP53	6q-Del	0.00231	1
NF1	Amp_8p11.21	0.00245	1
PIK3CA	Del_10q26.3	0.00251	1
16q-Del	Amp_3q26.32	0.00255	1
GPS2	Amp_1q44	0.0026	1
CDH1	Amp_12p13.33	0.00266	1
16q-Del	Amp_20q13.2	0.0027	1
1q-Amp	Amp_8p11.23	0.00281	1
Amp_1q21.3	Del_21q11.2	0.00284	1
CDH1	Amp_19q12	0.00296	1
GPS2	Amp_1q21.3	0.00304	1
PIK3CA	Del_19p13.3	0.00305	1
Amp_1q44	Amp_8p11.23	0.00312	1
CDH1	Amp_10p15.1	0.00337	1
MAP3K1	Del_17p12	0.00346	1
MAP3K1	Amp_10p15.1	0.00359	1
1q-Amp	Del_19p13.3	0.00389	1
PIK3CA	Del_6p25.3	0.00397	1
8q-Amp	4q-Del	0.00416	1
CDH1	8q-Amp	0.0042	1
CDH1	Del_4q35.1	0.00447	1
1q-Del	Amp_1q44	0.00448	1
Del_5q11.2	Del_16q24.3	0.00453	1
CDH1	Del_20p13	0.00456	1
GATA3	Del_5q21.3	0.00456	1
PIK3CA	Amp_1p22.3	0.00493	1
1q-Del	Amp_1q21.3	0.00516	1
TP53	Amp_1q44	0.00524	1
GATA3	PIK3CA	0.00527	1
1q-Amp	Del_11p15.5	0.00547	1
CDH1	Amp_3p25.1	0.00607	1
GATA3	Amp_10p15.1	0.00634	1
PIK3CA	4p-Del	0.0064	1
NF1	8q-Amp	0.00655	1
Amp_1p22.3	Del_9p23	0.00681	1
MLL3	Amp_17q23.1	0.00691	1
PIK3CA	Amp_13q34	0.00714	1
MAP3K1	17p-Del	0.00735	1
MLL3	Del_20p13	0.00773	1
CDH1	Del_6p25.3	0.00825	1
PIK3CA	Del_9p21.3	0.00827	1
PIK3CA	Del_11p15.5	0.00839	1
PIK3CA	16p-Del	0.00849	1
GATA3	Del_4q35.1	0.00863	1
Amp_1q21.3	Del_3p21.31	0.00867	1
Amp_1q44	Del_21q11.2	0.00888	1
PIK3CA	Del_6q15	0.00926	1
PIK3CA	8p-Amp	0.00933	1
1q-Amp	Del_3p21.31	0.00937	1
Amp_1p22.3	Del_9p21.3	0.00994	1
TBX3	Del_1p36.13	0.0106	1
NF1	Amp_8p11.23	0.0107	1
PIK3CA	Del_15q13.1	0.0108	1
PIK3CA	Amp_19q13.42	0.0111	1
TP53	16p-Amp	0.0113	1
TP53	1p-Del	0.0113	1
MAP3K1	Amp_17q12	0.0114	1
PIK3CA	13q-Del	0.0114	1
Amp_8p11.23	Del_17q21.31	0.0115	1
MYH9	8q-Amp	0.0116	1
MAP3K1	5q-Del	0.0118	1
GATA3	8q-Amp	0.012	1
CDH1	4q-Del	0.0121	1
22q-Del	Amp_6q21	0.0121	1
GATA3	Amp_8p11.21	0.0122	1
CDH1	Amp_6q21	0.0131	1
CDH1	Amp_19q13.42	0.0131	1
PTEN	Del_15q13.1	0.0131	1
16p-Amp	16p-Del	0.0132	1
16q-Del	Del_5q21.3	0.0132	1
CDH1	Del_1p36.13	0.0133	1
1q-Amp	Del_21q11.2	0.0134	1
FOXA1	TP53	0.0135	1
CASZ1	Del_11q23.3	0.0136	1
16p-Amp	Del_17p12	0.0136	1
16q-Del	Del_5q11.2	0.0136	1
CDH1	Del_15q13.1	0.0137	1
16q-Del	Amp_19q12	0.0139	1
CDH1	13q-Del	0.014	1
PIK3CA	Del_19q13.32	0.0146	1
MAP2K4	Del_19p13.3	0.0147	1
PIK3CA	9q-Del	0.0148	1
RUNX1	Del_8p23.2	0.0148	1
PTEN	16p-Amp	0.0149	1
CDH1	9p-Del	0.0151	1
MAP3K1	Amp_3q26.32	0.0152	1
NCOR1	Del_10q26.3	0.0152	1
GATA3	Amp_8q24.21	0.0153	1
BCORL1	8q-Amp	0.0154	1
MAP2K4	TP53	0.0157	1
GATA3	5q-Del	0.016	1
Amp_1q21.3	Del_8p23.2	0.0166	1
MLL3	Amp_17q12	0.0167	1
COL6A5	Amp_8p11.23	0.0168	1
1q-Amp	Del_4p16.3	0.0169	1
Amp_11q13.3	Amp_13q34	0.0169	1
CDH1	Del_13q14.2	0.0172	1
CTCF	TP53	0.0172	1
MLL3	22q-Del	0.0172	1
Amp_13q34	Del_6q15	0.0173	1
GATA3	Amp_3q26.32	0.0176	1
5p-Amp	Del_22q13.32	0.0176	1
Amp_6q21	Del_22q13.32	0.0176	1
16p-Amp	Del_12q24.31	0.0178	1
RUNX1	Amp_8q24.21	0.0179	1
NCOR1	6q-Del	0.0182	1
DST	Amp_8p11.21	0.0185	1
16q-Del	Amp_8q24.21	0.0187	1
PIK3CA	1q-Del	0.0188	1
1q-Amp	Del_8p23.2	0.0188	1
Amp_1q21.3	Del_12p13.1	0.0191	1
GATA3	4q-Del	0.0192	1
PIK3CA	Del_6q27	0.0194	1
1q-Amp	Amp_8q24.21	0.0195	1
MAP3K1	Del_19p13.3	0.0196	1
TNRC6B	Del_22q13.32	0.0196	1
16p-Amp	Del_17q21.31	0.0196	1
MLL3	Del_22q13.32	0.0201	1
DST	8q-Amp	0.0202	1
1q-Amp	Del_5q21.3	0.0203	1
MAP3K1	Del_12q23.1	0.0206	1
MAP3K1	Del_12q24.31	0.0206	1
22q-Del	Amp_10p15.1	0.0207	1
Del_5q21.3	Del_16q24.3	0.0208	1
MAP3K1	Del_10q26.3	0.0209	1
1q-Amp	Del_9p23	0.0209	1
SPEN	Amp_8p11.23	0.021	1
PIK3CA	BCORL1	0.0213	1
MAP2K4	13q-Del	0.0218	1
ARID1A	TP53	0.0224	1
MLL3	1p-Del	0.0227	1
GATA3	Amp_19q12	0.0228	1
Amp_19q13.42	Del_16q24.3	0.0228	1
8p-Amp	4q-Del	0.0233	1
MAP3K1	Del_6q27	0.0235	1
CBFB	Del_3p21.31	0.0236	1
FOXA1	Del_9p21.3	0.0236	1
1q-Amp	16p-Del	0.0236	1
PIK3CA	Amp_8p11.21	0.024	1
MAP2K4	Del_5q11.2	0.0241	1
Amp_10p15.1	Del_6q15	0.0243	1
APC	Del_22q13.32	0.0248	1
PIK3CA	Amp_11p13	0.0248	1
16q-Del	Amp_12p13.33	0.0249	1
Amp_1q21.3	Del_19q13.32	0.0253	1
GATA3	Del_10q26.3	0.0257	1
TBL1XR1	TP53	0.0263	1
GPRIN2	Del_11q23.3	0.0265	1
CDH1	8p-Del	0.0269	1
TNRC6B	22q-Del	0.0274	1
TBL1XR1	Del_17p12	0.0275	1
CDH1	Del_17q21.31	0.0276	1
PIK3CA	Del_21q11.2	0.0279	1
Amp_1q21.3	Del_11p15.5	0.0281	1
MAP3K1	Del_19q13.32	0.0284	1
Amp_1q21.3	Del_17p12	0.0285	1
NF1	22q-Del	0.0287	1
MAP3K1	Del_4q35.1	0.0297	1
MAP3K1	Del_15q13.1	0.0297	1
PIK3CA	17q-Amp	0.0299	1
1q-Amp	1q-Del	0.0301	1
MAP3K1	17q-Del	0.0306	1
TBX3	Del_14q24.1	0.0306	1
PIK3CA	Amp_20q13.2	0.0307	1
GATA3	Del_12q24.31	0.031	1
PIK3CA	Amp_17q12	0.0319	1
CASZ1	Del_13q14.2	0.0322	1
Amp_1q21.3	Del_20p13	0.0323	1
PTEN	Amp_8q24.21	0.0325	1
CDH1	Del_19q13.32	0.0326	1
PIK3CA	Del_1p36.13	0.0334	1
DST	Amp_8p11.23	0.0334	1
Amp_1q21.3	Del_9p23	0.0336	1
5p-Amp	22q-Del	0.0337	1
PIK3CA	Amp_8p11.23	0.0339	1
PTEN	Del_5q21.3	0.034	1
ZMYM3	Amp_11q13.3	0.034	1
MUC6	Amp_1q21.3	0.0343	1
NCOR1	Del_9q34.2	0.0345	1
NF1	Amp_8q24.21	0.0346	1
CDKN1B	Amp_8q24.21	0.0348	1
NF1	Del_14q24.1	0.0348	1
Amp_13q34	Del_16q24.3	0.0354	1
TP53	Del_22q13.32	0.0355	1
TBX3	Del_4q35.1	0.0359	1
CDH1	7p-Amp	0.036	1
1q-Amp	4p-Del	0.036	1
MAP3K1	Del_17q21.31	0.0361	1
MAP3K1	Amp_1q21.3	0.0364	1
CDH1	Amp_6p23	0.0365	1
Amp_17q12	Del_16q24.3	0.0365	1
MAP3K1	Del_5q21.3	0.0367	1
8p-Del	Amp_1p22.3	0.0374	1
GATA3	Del_5q11.2	0.0375	1
Amp_17q12	Del_10q23.31	0.0375	1
HIST1H2BC	Amp_8q24.21	0.0377	1
OR6C76	Amp_8q24.21	0.0377	1
RHOA	Amp_8q24.21	0.0377	1
CBFB	Del_18q23	0.038	1
1q-Amp	Del_2q37.3	0.0381	1
16p-Amp	14q-Del	0.0384	1
16p-Amp	17q-Del	0.0384	1
1q-Amp	4q-Del	0.0386	1
Amp_1q44	Del_2q37.3	0.0387	1
Amp_17q12	Del_6p25.3	0.039	1
CBFB	Del_17q21.31	0.0391	1
C1QTNF5	Del_16q24.3	0.0393	1
ATXN7L1	Del_16q24.3	0.0393	1
NCOR1	Del_6p25.3	0.0395	1
ATXN2	Del_22q13.32	0.0395	1
Amp_6q21	Del_6q15	0.0395	1
16p-Amp	Del_4p16.3	0.0398	1
CASP8	17p-Del	0.04	1
CDH1	GATA3	0.0401	1
RB1	Del_16q24.3	0.0405	1
NCOR1	Del_6q27	0.0406	1
20p-Amp	16q-Del	0.0406	1
PIK3CA	Del_9p23	0.0409	1
NCOR1	Del_14q24.1	0.041	1
ATHL1	Amp_1q21.3	0.0412	1
Amp_1q21.3	Amp_15q26.3	0.0418	1
FBXW7	22q-Del	0.0419	1
MYB	Del_13q14.2	0.042	1
FRMPD2	Del_13q14.2	0.042	1
CDH1	Amp_8p11.21	0.0424	1
FOXA1	Del_9p23	0.0425	1
DOCK11	Amp_1q21.3	0.0427	1
CDH1	Del_17p12	0.0428	1
TBX3	Del_4p16.3	0.0435	1
NCOR1	22q-Del	0.0436	1
TP53	MED23	0.0438	1
CDH1	Del_9q21.11	0.0442	1
Amp_11q13.3	Del_5q21.3	0.0442	1
16q-Del	Amp_10q22.3	0.0443	1
Amp_11p13	Del_16q24.3	0.0451	1
MYB	Del_8p23.2	0.0453	1
NF1	Amp_1q21.3	0.0456	1
Amp_20q13.2	Del_16q24.3	0.0456	1
MLL3	Del_5q21.3	0.0459	1
SF3B1	Amp_8q24.21	0.0459	1
CASP8	Amp_8p11.23	0.0464	1
MYB	Amp_8p11.23	0.0464	1
MAP3K1	Amp_1q44	0.0467	1
MLL3	Amp_8p11.21	0.0469	1
PIK3CA	Del_8p23.2	0.0469	1
PTEN	Del_2q37.3	0.0471	1
16q-Del	Amp_13q34	0.0472	1
8p-Del	Amp_1q21.3	0.0476	1
CDH1	Del_21q11.2	0.0479	1
TBX3	Amp_3q26.32	0.0479	1
CBFB	TP53	0.0481	1
MLL3	15q-Del	0.0483	1
1p-Del	Amp_6p23	0.0488	1
NF1	Del_4p16.3	0.049	1
MAP3K1	NCOR1	0.0494	1
RB1	Amp_8p11.23	0.0502	1
PCNXL2	Del_22q13.32	0.0503	1
CASZ1	Amp_8p11.21	0.0507	1
NCOR1	Amp_8q24.21	0.051	1
ERBB2	Amp_11q13.3	0.0515	1
EIF4A2	Del_11q23.3	0.0515	1
CBFB	Del_11p15.5	0.0516	1
CBFB	Del_14q24.1	0.0516	1
17q-Amp	17q-Del	0.0516	1
11q-Del	Amp_3q26.32	0.0517	1
RBMX	22q-Del	0.0519	1
CDH1	Amp_11p13	0.0522	1
TP53	Del_6q27	0.0524	1
1q-Amp	Amp_15q26.3	0.0533	1
ANKRD12	Del_6q27	0.0534	1
16p-Amp	9q-Del	0.0537	1
Amp_14q21.1	Del_16q24.3	0.0538	1
NCOR1	Amp_12q15	0.054	1
1q-Amp	6q-Del	0.0545	1
Amp_1p22.3	Amp_17q12	0.0546	1
GPS2	Del_13q14.2	0.0548	1
ZNF687	Del_13q14.2	0.0548	1
CASP8	Amp_11q13.3	0.0553	1
MYB	Amp_11q13.3	0.0553	1
PIK3CA	9p-Del	0.0563	1
PIK3CA	Del_11q23.3	0.0565	1
GATA3	Amp_6p23	0.0568	1
TP53	17q-Amp	0.0569	1
16p-Amp	Del_4q35.1	0.057	1
ERBB3	8q-Amp	0.0572	1
TBX3	Del_6q27	0.0575	1
WDR52	Del_6q15	0.0575	1
5p-Amp	Del_1p36.13	0.0575	1
RUNX1	8p-Del	0.0576	1
SPEN	Del_13q14.2	0.0578	1
TBX3	4p-Del	0.058	1
7p-Amp	Del_6q27	0.058	1
COL6A5	Amp_11q14.1	0.0585	1
7q-Amp	Amp_17q23.1	0.0591	1
FBXW7	Amp_17q12	0.0592	1
CBFB	Del_8p23.2	0.0597	1
TBX3	18p-Del	0.0598	1
16p-Amp	Del_5q21.3	0.0599	1
PTEN	Del_12p13.1	0.06	1
FGFR2	Amp_8p11.23	0.06	1
MAP3K1	Del_11p15.5	0.0609	1
PIK3CA	6q-Del	0.0613	1
16p-Amp	11q-Del	0.0613	1
NCOR1	8q-Amp	0.0615	1
TBX3	Del_22q13.32	0.0616	1
16q-Del	Amp_17q23.1	0.0616	1
CDH1	Del_9q34.2	0.062	1
HIST1H2BC	Del_16q24.3	0.0625	1
MAP3K1	16p-Del	0.0625	1
OR6C76	Del_16q24.3	0.0625	1
CABYR	Del_16q24.3	0.0625	1
MAP3K1	11p-Del	0.0628	1
RB1	Amp_11q13.3	0.0629	1
16p-Amp	Del_6q27	0.0629	1
TNRC6B	Del_9p21.3	0.0632	1
Amp_1p22.3	Amp_11q13.3	0.0633	1
CASP8	Amp_8p11.21	0.0638	1
RBMX	Del_11q23.3	0.0638	1
Amp_12p13.33	Del_17p12	0.0642	1
1q-Amp	Del_9p21.3	0.0644	1
16q-Del	Amp_12q15	0.0645	1
CDH1	17q-Amp	0.0647	1
CDH1	Amp_4q13.3	0.0647	1
GATA3	Amp_12p13.33	0.0648	1
16q-Del	Amp_14q21.1	0.0652	1
8q-Amp	Del_17q21.31	0.0655	1
CDH1	9q-Del	0.0658	1
CASP8	Amp_20q13.2	0.0659	1
RPGR	11q-Del	0.0659	1
PIK3CA	Amp_4q13.3	0.0664	1
TBX3	Amp_20q13.2	0.0664	1
Amp_1q21.3	Amp_8p11.23	0.0668	1
CASP8	8p-Del	0.0669	1
MYB	8p-Del	0.0669	1
ATXN2	16q-Del	0.067	1
16p-Amp	Del_12q23.1	0.0676	1
TP53	SPEN	0.0678	1
1q-Amp	Del_22q13.32	0.0679	1
16q-Del	Amp_19q13.42	0.068	1
NF1	8p-Amp	0.0685	1
TBL1XR1	17p-Del	0.0687	1
SF3B1	Del_1p36.13	0.0688	1
CBFB	Del_4p16.3	0.0697	1
16p-Amp	9p-Del	0.0697	1
PCNXL2	22q-Del	0.07	1
PTEN	17q-Del	0.0704	1
TP53	Amp_17q23.1	0.0705	1
TBX3	Del_3p21.31	0.0713	1
TBX3	Del_9p21.3	0.0713	1
NCOR1	Del_22q13.32	0.0719	1
SF3B1	8q-Amp	0.0719	1
MLL3	Del_2q37.3	0.0721	1
TBX3	20p-Amp	0.0722	1
Amp_11q13.3	Del_5q11.2	0.0722	1
GATA3	Amp_6q21	0.0723	1
17p-Del	Amp_12p13.33	0.0725	1
NF1	Del_22q13.32	0.0729	1
Amp_1q44	Del_12p13.1	0.0729	1
PTEN	Amp_12q15	0.0732	1
SPEN	Del_2q37.3	0.0734	1
CDH1	Amp_14q21.1	0.0735	1
1q-Amp	Amp_11p13	0.0735	1
C15orf39	16q-Del	0.0742	1
TBX3	Del_5q21.3	0.0745	1
16p-Amp	4p-Del	0.0746	1
Amp_8p11.21	Del_17q21.31	0.0747	1
MLL3	Del_6q27	0.0748	1
Amp_1q21.3	Del_9p21.3	0.0752	1
CBFB	Amp_3q26.32	0.0756	1
Amp_8q24.21	Del_16q24.3	0.0758	1
1q-Amp	Del_10q23.31	0.0759	1
1q-Amp	Del_6q15	0.0765	1
MAP2K4	Del_12p13.1	0.0766	1
17p-Del	Amp_1q21.3	0.0768	1
MAP3K1	Amp_6q21	0.0773	1
GATA3	8p-Amp	0.0774	1
CDKN1B	Amp_8p11.23	0.0776	1
Amp_3q26.32	Del_6q15	0.0776	1
CCDC82	Del_8p23.2	0.079	1
RHOA	Del_8p23.2	0.079	1
IRS4	Del_22q13.32	0.0792	1
MED23	13q-Del	0.0796	1
RUNX1	Amp_17q23.1	0.08	1
FGFR2	Amp_8p11.21	0.0804	1
1q-Amp	Del_5q11.2	0.0805	1
Amp_1q21.3	Amp_20q13.2	0.0805	1
Amp_1q44	Del_8p23.2	0.0813	1
5p-Amp	Del_21q11.2	0.0814	1
14q-Del	Amp_19q13.42	0.0814	1
ARID1A	Del_9p21.3	0.0815	1
PIK3CA	Del_3p21.31	0.0815	1
Amp_6p23	Del_16q24.3	0.0822	1
EIF4A2	8q-Amp	0.0824	1
PTEN	15q-Del	0.0825	1
RBMX	Del_6q15	0.0825	1
GPS2	Amp_20q13.2	0.0827	1
AKD1	Del_11q23.3	0.0827	1
FGFR2	Amp_20q13.2	0.0827	1
18q-Del	Amp_6q21	0.0828	1
CASP8	Del_17p12	0.0832	1
MYB	Del_17p12	0.0832	1
TGS1	Del_17p12	0.0832	1
GATA3	Del_4p16.3	0.0835	1
16p-Amp	4q-Del	0.084	1
CBFB	Del_10q23.31	0.0842	1
16p-Amp	Del_6q15	0.0847	1
Amp_17q12	Del_14q24.1	0.0852	1
APC	Del_13q14.2	0.0854	1
COL6A5	Amp_11q13.3	0.0854	1
7p-Amp	Del_12q23.1	0.0854	1
7p-Amp	Del_12q24.31	0.0854	1
MAP2K4	MAP3K1	0.0855	1
Amp_19q13.42	Del_7q36.1	0.0856	1
NF1	11q-Del	0.0858	1
MORN1	Amp_8q24.21	0.0861	1
CBFB	13q-Del	0.0865	1
CBFB	Del_10q26.3	0.0865	1
FOXA1	9p-Del	0.0865	1
ZFP36L2	1q-Amp	0.0865	1
Amp_6p23	Del_1p22.1	0.0865	1
5p-Amp	6q-Del	0.0866	1
FBXW7	Del_9p21.3	0.0878	1
MAP3K1	Amp_13q34	0.0879	1
PCNXL2	Del_5q11.2	0.0881	1
TBX3	22q-Del	0.0886	1
CDH1	Del_12p13.1	0.0888	1
CBFB	4p-Del	0.0889	1
ATXN2	Del_8p23.2	0.0895	1
FAM86B1	Amp_1q44	0.0899	1
C15orf39	Amp_1q44	0.0899	1
RBMX	Del_6q27	0.09	1
17q-Amp	18p-Del	0.0901	1
TBL1XR1	Del_8p23.2	0.0909	1
16p-Amp	6q-Del	0.091	1
CBFB	18p-Del	0.0913	1
PTEN	Del_5q11.2	0.0915	1
1q-Amp	Del_17q21.31	0.0919	1
PTEN	Amp_1q21.3	0.092	1
ERBB2	16p-Amp	0.0922	1
SF3B1	TP53	0.0924	1
TP53	MYH9	0.0924	1
Amp_12p13.33	Del_6q15	0.0925	1
HIST1H3B	Amp_8q24.21	0.0932	1
TAF1L	Amp_11q13.3	0.0933	1
16q-Del	Amp_17q12	0.0934	1
Amp_10p15.1	Del_9p23	0.0934	1
17q-Amp	18q-Del	0.0935	1
18q-Del	Amp_4q13.3	0.0935	1
Amp_1q21.3	Del_10q23.31	0.0938	1
1q-Amp	Del_20p13	0.0939	1
RUNX1	Amp_8p11.23	0.094	1
ERBB2	20q-Amp	0.0944	1
WDR52	Amp_8p11.23	0.0944	1
KDM6A	Amp_8p11.23	0.0944	1
MED23	Amp_8q24.21	0.0945	1
CASZ1	13q-Del	0.0955	1
TBX3	Del_2q37.3	0.0957	1
NCOR1	Amp_19q13.42	0.0959	1
17q-Amp	Amp_6q21	0.0959	1
NCOR1	Amp_8p11.23	0.0962	1
17q-Del	Amp_11q13.3	0.0963	1
MUC6	Del_1p36.13	0.0964	1
1p-Del	Amp_19p13.12	0.0964	1
SPEN	4q-Del	0.0966	1
7q-Amp	4q-Del	0.0966	1
TBX3	Del_13q14.2	0.0971	1
CTCF	Del_9p23	0.0977	1
TNRC6B	Del_9p23	0.0977	1
FAM86B1	Amp_1q21.3	0.0978	1
1q-Amp	5q-Del	0.098	1
IRS4	22q-Del	0.0982	1
1q-Amp	8p-Del	0.0984	1
1q-Amp	17p-Del	0.0986	1
WSCD2	Del_6q15	0.0987	1
CASZ1	Del_6q15	0.0987	1
ERBB2	Del_4p16.3	0.099	1
ERBB2	Del_5q11.2	0.099	1
RUNX1	Del_18q23	0.0991	1
HRNR	Amp_20q13.2	0.0993	1
MLL3	Del_12p13.1	0.0998	1
ATXN7L1	Del_11q23.3	0.0998	1
TFE3	Del_11q23.3	0.0998	1
ANGPT4	Del_22q13.32	0.0999	1
MUC6	Amp_1q44	0.0999	1
CDH1	18p-Del	0.1	1
6q-Del	Amp_13q34	0.1	1
CDH1	DOCK11	0.101	1
GPS2	Amp_17q23.1	0.101	1
WDR52	Del_16q24.3	0.101	1
ANGPT4	Amp_8p11.21	0.101	1
KDM6A	Del_16q24.3	0.101	1
20p-Amp	Del_22q13.32	0.102	1
8p-Del	Amp_1q44	0.102	1
Amp_10q22.3	Del_6q27	0.102	1
C1QTNF5	16q-Del	0.103	1
ATXN7L1	16q-Del	0.103	1
COL6A5	Amp_8p11.21	0.103	1
MED23	Del_9p21.3	0.103	1
SPEN	17q-Del	0.103	1
TFE3	16q-Del	0.103	1
APC	Del_18q23	0.104	1
MAP3K1	Del_5q11.2	0.104	1
PIK3CA	11p-Del	0.104	1
TBL1XR1	Amp_20q13.2	0.104	1
TNRC6B	Del_11q23.3	0.104	1
Amp_1q21.3	Del_17q21.31	0.104	1
CDH1	Del_18q23	0.105	1
TBL1XR1	8p-Del	0.105	1
SPEN	13q-Del	0.105	1
16p-Amp	Del_2q37.3	0.105	1
1p-Del	Amp_19q12	0.105	1
22q-Del	Amp_3q26.32	0.105	1
CDH1	Del_14q24.1	0.106	1
ERBB2	Amp_3q26.32	0.106	1
PIK3R1	Del_13q14.2	0.106	1
NF1	Del_11q23.3	0.106	1
CDH1	8p-Amp	0.107	1
TP53	IRS4	0.107	1
CASZ1	Del_6q27	0.107	1
RBMX	11q-Del	0.107	1
ZMYM3	11q-Del	0.107	1
CTCF	Del_19p13.3	0.108	1
ANKRD12	Del_19p13.3	0.108	1
7q-Amp	Del_11p15.5	0.108	1
8q-Amp	22q-Del	0.108	1
1p-Del	Amp_10q22.3	0.108	1
PIWIL1	16q-Del	0.109	1
ANKRD12	Amp_8p11.21	0.109	1
FRMPD2	Del_11q23.3	0.109	1
TGS1	Del_11q23.3	0.109	1
Amp_10p15.1	Del_11q23.3	0.109	1
CBFB	Del_5q21.3	0.11	1
CTCF	Del_8p23.2	0.11	1
GATA3	Del_6p25.3	0.11	1
MAP2K4	Del_1p36.13	0.11	1
RUNX1	Del_9p23	0.11	1
TAF1L	Del_8p23.2	0.11	1
Amp_11q13.3	Del_14q24.1	0.11	1
ACTL6B	PIK3CA	0.111	1
RPGR	Amp_1q21.3	0.111	1
COL6A5	11q-Del	0.111	1
SPEN	Del_6q15	0.111	1
APC	Del_9p23	0.112	1
KDM6A	Del_9p23	0.112	1
16p-Amp	11p-Del	0.112	1
CTCF	Amp_20q13.2	0.113	1
CTCF	Del_11p15.5	0.113	1
CTCF	Del_14q24.1	0.113	1
MLL3	11q-Del	0.113	1
PIWIL1	Del_14q24.1	0.113	1
PTEN	5q-Del	0.113	1
RPGR	Del_11p15.5	0.113	1
TP53	OR6C76	0.113	1
TNRC6B	Amp_20q13.2	0.113	1
ZBTB7C	Amp_8q24.21	0.113	1
Amp_12p13.33	Del_6q27	0.113	1
MAP2K4	Amp_11q14.1	0.114	1
MLL3	Del_11q23.3	0.114	1
1p-Del	Amp_4q13.3	0.114	1
CDH1	Del_6q15	0.115	1
MYB	13q-Del	0.115	1
TAF1L	8p-Del	0.115	1
FRMPD2	13q-Del	0.115	1
PCNXL2	8p-Amp	0.115	1
Amp_12q15	Del_16q24.3	0.115	1
CBFB	Amp_6p23	0.116	1
CDH1	Del_22q13.32	0.116	1
FOXA1	Amp_6p23	0.116	1
PIK3R1	Amp_8p11.23	0.116	1
ABCA8	Amp_8p11.23	0.116	1
OR6C76	Del_17p12	0.116	1
BCORL1	Amp_8p11.23	0.116	1
OXCT2	Amp_1q44	0.116	1
PCNXL2	Amp_8p11.23	0.116	1
TCP11	Del_17p12	0.116	1
17q-Amp	Del_5q21.3	0.116	1
20p-Amp	22q-Del	0.116	1
CDH1	17q-Del	0.117	1
ERBB2	Del_10q23.31	0.117	1
MLL3	Del_9q21.11	0.117	1
RUNX1	Del_9q21.11	0.117	1
16p-Del	Amp_20q13.2	0.117	1
CASP8	Del_6q15	0.118	1
UBC	Del_6q15	0.118	1
FRMPD2	Del_6q15	0.118	1
PCNXL2	Del_11q23.3	0.118	1
ERBB2	Del_10q26.3	0.119	1
SPEN	15q-Del	0.119	1
SPEN	Del_20p13	0.119	1
17q-Amp	Del_12q24.31	0.119	1
GPS2	1q-Amp	0.12	1
MYB	Del_16q24.3	0.12	1
ABCA8	Del_18q23	0.12	1
7p-Amp	Del_1p22.1	0.12	1
CBFB	Del_9p21.3	0.121	1
MAP2K4	Del_4p16.3	0.121	1
RUNX1	17q-Del	0.121	1
AKD1	Amp_17q23.1	0.121	1
ANGPT4	22q-Del	0.121	1
CDH1	Amp_8p11.23	0.122	1
FBXW7	Del_17q21.31	0.122	1
MAP2K4	Del_9p21.3	0.122	1
TBX3	4q-Del	0.122	1
5q-Del	Amp_1q44	0.122	1
HIST1H2BC	1q-Amp	0.123	1
PTEN	5p-Amp	0.123	1
PTEN	Amp_11p13	0.123	1
TBX3	Del_9p23	0.123	1
WDR52	Del_19p13.3	0.123	1
KDM6A	Del_19p13.3	0.123	1
OXCT2	Amp_1q21.3	0.123	1
PAX2	Amp_1q21.3	0.123	1
7p-Amp	Amp_17q23.1	0.123	1
MAP3K1	Amp_17q23.1	0.124	1
PTEN	Del_22q13.32	0.124	1
SPEN	Del_15q13.1	0.124	1
6q-Del	Del_12q23.1	0.124	1
GATA3	Del_10q23.31	0.125	1
PIK3CA	Del_18q23	0.125	1
PTEN	Amp_17q12	0.125	1
RPGR	Del_4q35.1	0.125	1
DOCK11	18p-Del	0.125	1
SPEN	Del_6q27	0.125	1
7q-Amp	Del_6q27	0.125	1
MAP3K1	Amp_1p22.3	0.126	1
TBX3	Amp_12p13.33	0.126	1
CASZ1	11q-Del	0.126	1
CASP8	Del_6q27	0.127	1
UBC	Del_6q27	0.127	1
Amp_11q13.3	Amp_15q26.3	0.127	1
ERBB2	8p-Amp	0.128	1
NCOR1	Del_1p36.13	0.128	1
MYH9	Del_11p15.5	0.128	1
KDM6A	Del_14q24.1	0.128	1
Amp_19q13.42	Del_1p36.13	0.128	1
CBFB	8p-Del	0.129	1
FBXW7	Del_9p23	0.129	1
MAP3K1	Del_11q23.3	0.129	1
MYH9	Del_22q13.32	0.129	1
MAP3K1	Amp_20q13.2	0.13	1
MLL3	Del_7q36.1	0.13	1
TBX3	14q-Del	0.13	1
ATXN2	Del_13q14.2	0.13	1
DST	Amp_19q13.42	0.13	1
APC	Del_11q23.3	0.131	1
PIK3CA	Amp_11q14.1	0.131	1
MYH9	Amp_8p11.21	0.131	1
WDR52	Amp_8p11.21	0.131	1
8q-Amp	4p-Del	0.131	1
RPGR	16p-Amp	0.132	1
TAF1L	16p-Amp	0.132	1
COL6A5	8q-Amp	0.132	1
ERBB3	16p-Amp	0.132	1
ARID1A	4q-Del	0.133	1
C1QTNF5	Amp_8q24.21	0.133	1
PTEN	Amp_13q34	0.133	1
SMAD2	Amp_8q24.21	0.133	1
OR4D10	Amp_8q24.21	0.133	1
CASZ1	Amp_8q24.21	0.133	1
DLG1	Amp_8q24.21	0.133	1
MR1	Amp_8q24.21	0.133	1
4q-Del	Amp_1q21.3	0.133	1
Amp_19q13.42	Del_4p16.3	0.133	1
MLL3	Del_1p22.1	0.134	1
17q-Amp	Del_14q24.1	0.134	1
CTCF	20q-Amp	0.135	1
MYB	Del_1p36.13	0.135	1
RPGR	Amp_11q14.1	0.135	1
ANKRD12	Amp_11q14.1	0.135	1
WDR52	Amp_1q44	0.135	1
BCORL1	Del_16q24.3	0.135	1
TGS1	Del_1p36.13	0.135	1
Amp_15q26.3	Del_16q24.3	0.135	1
CBFB	Del_2q37.3	0.136	1
TBL1XR1	Amp_8q24.21	0.136	1
ANGPT4	Amp_8q24.21	0.136	1
17p-Del	Amp_10q22.3	0.136	1
4q-Del	Amp_11q13.3	0.136	1
Amp_1q44	Del_9p21.3	0.136	1
ARID1A	Del_9p23	0.137	1
FBXW7	Amp_11q13.3	0.137	1
GPS2	13q-Del	0.137	1
MAP2K4	5q-Del	0.137	1
MLL3	Amp_6p23	0.137	1
RUNX1	15q-Del	0.137	1
WDR52	16q-Del	0.137	1
BCORL1	Amp_11q13.3	0.137	1
NF1	Del_9q21.11	0.137	1
ZNF687	13q-Del	0.137	1
14q-Del	Amp_17q12	0.137	1
Amp_10q22.3	Del_16q24.3	0.137	1
ZFP36L2	Amp_1q44	0.138	1
ANKRD12	22q-Del	0.138	1
ATXN2	Del_18q23	0.138	1
ANKRD20A4	Amp_1q44	0.138	1
DOCK11	Amp_8p11.23	0.138	1
KRAS	Del_11q23.3	0.139	1
PIK3CA	Amp_19p13.12	0.139	1
OR6C76	Del_11q23.3	0.139	1
CASZ1	Amp_1q44	0.139	1
CEP57	Del_11q23.3	0.139	1
TCP11	Del_11q23.3	0.139	1
1q-Amp	Del_15q13.1	0.139	1
CBFB	11p-Del	0.14	1
CBFB	Del_9q34.2	0.14	1
FOXA1	Del_9q34.2	0.14	1
MAP2K4	Amp_10p15.1	0.14	1
MAP3K1	Del_13q14.2	0.14	1
MLL3	Amp_8p11.23	0.14	1
CASZ1	8q-Amp	0.14	1
MLL4	8q-Amp	0.14	1
APC	Del_4q35.1	0.141	1
FBXW7	Del_19p13.3	0.141	1
PIK3CA	11q-Del	0.141	1
RPGR	Del_4p16.3	0.141	1
THEM5	Del_6q15	0.141	1
ANKRD12	Del_4p16.3	0.141	1
DNAH12	Del_4q35.1	0.141	1
ERBB3	Del_5q11.2	0.141	1
GPRIN2	Del_6q15	0.141	1
MYH9	Del_4q35.1	0.141	1
NF1	14q-Del	0.141	1
NF1	Amp_19q12	0.141	1
NF1	Del_21q11.2	0.141	1
CDH1	CTCF	0.143	1
CDH1	22q-Del	0.143	1
HIST1H2BC	16q-Del	0.143	1
MYB	Del_3p21.31	0.143	1
MYB	Del_9p21.3	0.143	1
TP53	Amp_1q21.3	0.143	1
OR6C76	16q-Del	0.143	1
CABYR	16q-Del	0.143	1
TNRC6B	Amp_17q23.1	0.143	1
20q-Amp	Amp_13q34	0.143	1
Amp_1q44	Del_17q21.31	0.143	1
ERBB2	20p-Amp	0.144	1
PTEN	Del_17q21.31	0.144	1
SMAD2	8q-Amp	0.144	1
CCNL2	8q-Amp	0.144	1
OR4D10	8q-Amp	0.144	1
MR1	8q-Amp	0.144	1
Amp_19q12	Del_1p36.13	0.144	1
GATA3	Del_6q27	0.145	1
CDH1	Del_6q27	0.146	1
FBXW7	Del_11p15.5	0.146	1
TBX3	Del_11p15.5	0.146	1
IRS4	16q-Del	0.146	1
SLC35B2	Amp_11q13.3	0.146	1
SPEN	Del_4p16.3	0.146	1
SPEN	Del_5q11.2	0.146	1
Amp_1p22.3	Del_11q23.3	0.146	1
ERBB2	Del_5q21.3	0.147	1
MAP2K4	Amp_6q21	0.147	1
CASP8	11q-Del	0.148	1
NCOR1	7p-Amp	0.148	1
ZFP36L2	Amp_1q21.3	0.148	1
ANKRD20A4	Amp_1q21.3	0.148	1
FRMPD2	11q-Del	0.148	1
MED23	Del_9p23	0.148	1
RBMX	Del_9p23	0.148	1
TGS1	11q-Del	0.148	1
16p-Amp	Del_14q24.1	0.148	1
17q-Amp	7p-Amp	0.148	1
1q-Amp	Del_11q23.3	0.148	1
6q-Del	Del_4q35.1	0.148	1
CTCF	Amp_3q26.32	0.149	1
GATA3	Amp_11q13.3	0.149	1
PIK3CA	MLL4	0.149	1
KDM6A	16p-Amp	0.149	1
Amp_11p13	Del_9p23	0.149	1
AARS	22q-Del	0.15	1
CDH1	7q-Amp	0.15	1
16q-Del	Del_10q23.31	0.15	1
Amp_1q44	Amp_15q26.3	0.15	1
RUNX1	Amp_20q13.2	0.151	1
ZNF41	Del_6q27	0.151	1
7p-Amp	14q-Del	0.151	1
CDH1	Amp_19p13.12	0.152	1
CTCF	Amp_1p22.3	0.152	1
PIK3CA	NFE2L3	0.152	1
TAF1L	Amp_1p22.3	0.152	1
DST	1p-Del	0.152	1
NF1	Amp_17q12	0.152	1
5p-Amp	Del_2q37.3	0.152	1
Amp_1q44	Del_9p23	0.152	1
Amp_11p13	Del_2q37.3	0.152	1
MAP2K4	Amp_11q13.3	0.153	1
MAP2K4	Del_10q26.3	0.153	1
CASZ1	Amp_1q21.3	0.153	1
NF1	Del_8p23.2	0.153	1
17q-Amp	Del_2q37.3	0.153	1
ACTL6B	Amp_1q21.3	0.154	1
ARID1A	Del_19p13.3	0.154	1
MAP3K1	Del_7p22.3	0.154	1
PTEN	Del_6q15	0.154	1
WSCD2	17p-Del	0.154	1
ATXN7L1	17p-Del	0.154	1
DLG1	17p-Del	0.154	1
DOCK11	Amp_6p23	0.154	1
16p-Amp	Del_13q14.2	0.154	1
Amp_8p11.23	Amp_15q26.3	0.155	1
RUNX1	8q-Amp	0.156	1
HRNR	Amp_6q21	0.156	1
HRNR	Amp_19q13.42	0.156	1
Amp_4q13.3	Del_22q13.32	0.156	1
MAP2K4	4p-Del	0.157	1
NCOR1	Del_8p23.2	0.157	1
ATHL1	1q-Amp	0.157	1
SPEN	Amp_17q23.1	0.157	1
1q-Amp	Del_17p12	0.157	1
1q-Amp	Del_19q13.32	0.157	1
5p-Amp	11q-Del	0.157	1
APC	Del_4p16.3	0.158	1
ARID1A	Del_20p13	0.158	1
CDH1	Del_10q23.31	0.158	1
ATXN7L1	Del_13q14.2	0.158	1
CCNL2	Del_13q14.2	0.158	1
DNAH12	Del_4p16.3	0.158	1
MYH9	Del_4p16.3	0.158	1
MYH9	Del_5q11.2	0.158	1
ANKRD20A4	Del_13q14.2	0.158	1
KDM6A	Del_5q11.2	0.158	1
TFE3	Del_13q14.2	0.158	1
TTPAL	Del_16q24.3	0.158	1
ZNF362	Del_16q24.3	0.158	1
5p-Amp	11p-Del	0.158	1
GATA3	14q-Del	0.159	1
GRHL2	Del_22q13.32	0.159	1
MORN1	Del_22q13.32	0.159	1
CASZ1	Del_18q23	0.159	1
PSIP1	Del_22q13.32	0.159	1
TPP2	Del_22q13.32	0.159	1
5q-Del	Del_16q24.3	0.159	1
CASP8	Del_8p23.2	0.16	1
NCOR1	Amp_8p11.21	0.16	1
AKD1	Amp_17q12	0.16	1
GPRIN2	Del_1p36.13	0.16	1
FRMPD2	Del_8p23.2	0.16	1
IRS4	Del_1p36.13	0.16	1
ZNF687	Del_1p36.13	0.16	1
CDH1	WDR52	0.161	1
AKD1	6q-Del	0.161	1
ATXN2	Del_19p13.3	0.161	1
MYH9	Del_1p22.1	0.161	1
NF1	Amp_11q13.3	0.161	1
Amp_1q44	Amp_8q24.21	0.161	1
Amp_11q14.1	Del_12p13.1	0.161	1
GATA3	Del_11p15.5	0.162	1
SPEN	Amp_1p22.3	0.162	1
APC	22q-Del	0.163	1
MAP3K1	Del_18q23	0.163	1
DNAH12	22q-Del	0.163	1
DST	Amp_8q24.21	0.163	1
MYH9	22q-Del	0.163	1
WDR52	22q-Del	0.163	1
16p-Amp	Del_3p21.31	0.163	1
16p-Amp	Del_9p21.3	0.163	1
MLL3	Del_14q24.1	0.164	1
MORN1	Amp_20q13.2	0.164	1
DOCK11	Del_1p36.13	0.164	1
IRS4	Del_16q24.3	0.164	1
14q-Del	Amp_11q13.3	0.164	1
Amp_19p13.12	Del_16q24.3	0.164	1
CTCF	9p-Del	0.165	1
GATA3	Del_7p22.3	0.165	1
PIWIL1	9p-Del	0.165	1
TBX3	Del_15q13.1	0.165	1
ATXN2	Amp_11q13.3	0.165	1
RBMX	Amp_11q13.3	0.165	1
NCOR1	Del_13q14.2	0.166	1
RUNX1	20q-Amp	0.166	1
RUNX1	Amp_11q14.1	0.166	1
TBX3	Amp_15q26.3	0.166	1
GRHL2	8p-Del	0.166	1
MED23	Del_11p15.5	0.166	1
MUC6	Del_11p15.5	0.166	1
ZMYM3	Del_11p15.5	0.166	1
ZMYM3	Del_14q24.1	0.166	1
Amp_3q26.32	Del_6q27	0.166	1
GATA3	Del_1p22.1	0.167	1
MAP3K1	11q-Del	0.167	1
FBXO17	Del_17p12	0.167	1
CBFB	4q-Del	0.168	1
FBXW7	16p-Amp	0.168	1
FOXA1	4q-Del	0.168	1
PIK3R1	16p-Amp	0.168	1
RPGR	4p-Del	0.168	1
SMAD2	Amp_8p11.23	0.168	1
ANKRD12	4p-Del	0.168	1
ATXN7L1	Amp_8p11.23	0.168	1
CCNL2	Amp_8p11.23	0.168	1
COL6A5	Amp_12q15	0.168	1
OR4D10	Amp_8p11.23	0.168	1
MR1	Amp_8p11.23	0.168	1
Amp_1q44	Amp_12q15	0.168	1
Amp_8p11.21	Amp_15q26.3	0.168	1
MAP3K1	Del_6q15	0.169	1
THEM5	Del_3p21.31	0.169	1
GPRIN2	Del_3p21.31	0.169	1
PRICKLE3	Del_6q15	0.169	1
IRS4	Del_9p21.3	0.169	1
1q-Amp	Amp_13q34	0.169	1
Amp_4q13.3	Amp_19p13.12	0.169	1
WSCD2	Del_9p23	0.17	1
BCORL1	16q-Del	0.17	1
KDM6A	Amp_1p22.3	0.17	1
MUC6	1q-Amp	0.17	1
PIK3CA	Del_4q35.1	0.171	1
ABCA8	Amp_11q14.1	0.171	1
BCORL1	20q-Amp	0.171	1
CBFB	Amp_12p13.33	0.172	1
CBFB	Del_9q21.11	0.172	1
FOXA1	Del_9q21.11	0.172	1
NF1	13q-Del	0.172	1
MLL3	Del_7p22.3	0.173	1
SF3B1	Amp_10p15.1	0.173	1
THEM5	11q-Del	0.173	1
GPRIN2	11q-Del	0.173	1
DLG1	Amp_8p11.23	0.173	1
IRS4	11q-Del	0.173	1
ZNF687	11q-Del	0.173	1
PTEN	Del_19q13.32	0.174	1
UBC	8q-Amp	0.174	1
RPGR	8p-Amp	0.175	1
GATA3	Del_13q14.2	0.176	1
CBFB	14q-Del	0.177	1
CBFB	17q-Del	0.177	1
CBFB	Amp_19q12	0.177	1
FOXA1	Del_21q11.2	0.177	1
PTEN	22q-Del	0.177	1
ABCA8	Del_5q11.2	0.177	1
ATXN2	Del_16q24.3	0.177	1
MORN1	Del_8p23.2	0.177	1
DOCK11	Del_2q37.3	0.177	1
CDH1	Amp_10q22.3	0.178	1
ANKRD12	6q-Del	0.178	1
16p-Amp	Amp_17q23.1	0.178	1
CBFB	Amp_8q24.21	0.179	1
MAP3K1	6q-Del	0.179	1
PIK3CA	DNAH12	0.179	1
20p-Amp	Del_16q24.3	0.179	1
6q-Del	Amp_12p13.33	0.179	1
APC	Del_10q23.31	0.18	1
GATA3	Amp_11p13	0.18	1
MYH9	Del_10q23.31	0.18	1
WDR52	Del_10q23.31	0.18	1
20p-Amp	Del_12p13.1	0.18	1
ARID1A	Del_4q35.1	0.181	1
FBXW7	Del_1p22.1	0.181	1
NF1	Del_4q35.1	0.181	1
CDKN1B	Del_11q23.3	0.182	1
RPGR	8q-Amp	0.182	1
APC	9p-Del	0.183	1
GATA3	DNAH12	0.183	1
PIK3CA	7q-Amp	0.183	1
WSCD2	Del_19p13.3	0.183	1
MYH9	9p-Del	0.183	1
KDM6A	9p-Del	0.183	1
MLL4	Del_19p13.3	0.183	1
5p-Amp	Del_6q15	0.183	1
CASP8	Amp_8q24.21	0.184	1
CASP8	Del_18q23	0.184	1
CBFB	Del_11q23.3	0.184	1
HLA-DRB5	Del_8p23.2	0.184	1
MLL3	Amp_15q26.3	0.184	1
MYB	Amp_8q24.21	0.184	1
NCOR1	Amp_10q22.3	0.184	1
RAB42	Del_8p23.2	0.184	1
RB1	16q-Del	0.184	1
UBC	Del_18q23	0.184	1
FRMPD2	Del_18q23	0.184	1
RBMX	Del_22q13.32	0.184	1
ZBTB7C	Del_8p23.2	0.184	1
CBFB	Del_13q14.2	0.185	1
PIK3CA	18q-Del	0.185	1
ZFP36L1	Amp_17q12	0.185	1
HLA-C	Amp_17q12	0.185	1
SPEN	4p-Del	0.185	1
TNRC6B	Amp_17q12	0.185	1
7q-Amp	4p-Del	0.185	1
11q-Del	Amp_10p15.1	0.185	1
CASP8	Del_17q21.31	0.186	1
ZFP36L2	Amp_11q13.3	0.186	1
GRHL2	22q-Del	0.186	1
ANKRD20A4	Amp_11q13.3	0.186	1
FRMPD2	Del_17q21.31	0.186	1
PSIP1	22q-Del	0.186	1
TPP2	22q-Del	0.186	1
APC	4p-Del	0.187	1
SF3B1	4p-Del	0.187	1
DNAH12	4p-Del	0.187	1
MYH9	4p-Del	0.187	1
CBFB	Del_9p23	0.188	1
MLL3	11p-Del	0.188	1
MLL3	Del_9q34.2	0.188	1
RUNX1	5p-Amp	0.188	1
RUNX1	Amp_6q21	0.188	1
RUNX1	Amp_11p13	0.188	1
RUNX1	Amp_19q13.42	0.188	1
RUNX1	Del_9p21.3	0.188	1
TBX3	5q-Del	0.188	1
TBX3	Del_11q23.3	0.188	1
Amp_4q13.3	Del_12p13.1	0.188	1
CDH1	17p-Del	0.189	1
MYB	17p-Del	0.189	1
PTPN22	Del_1p36.13	0.189	1
WSCD2	Del_14q24.1	0.189	1
DLG1	Del_11p15.5	0.189	1
MLL4	Del_11p15.5	0.189	1
TGS1	17p-Del	0.189	1
20p-Amp	Del_19q13.32	0.189	1
APC	18p-Del	0.19	1
HIST1H2BC	8q-Amp	0.19	1
MAP3K1	Del_9p23	0.19	1
TBX3	Del_5q11.2	0.19	1
MLC1	8q-Amp	0.19	1
MYH9	18p-Del	0.19	1
OR6C76	8q-Amp	0.19	1
RHOA	8q-Amp	0.19	1
5p-Amp	Del_11p15.5	0.19	1
7q-Amp	18p-Del	0.19	1
ABCA8	22q-Del	0.191	1
DOCK11	Del_16q24.3	0.191	1
20q-Amp	16q-Del	0.191	1
MED23	Amp_20q13.2	0.192	1
MUC6	Amp_20q13.2	0.192	1
CTCF	20p-Amp	0.193	1
ERBB2	Amp_8q24.21	0.193	1
FBXO17	Del_11q23.3	0.193	1
FXYD5	Del_11q23.3	0.193	1
CDC42EP1	Del_11q23.3	0.193	1
NBPF9	Del_11q23.3	0.193	1
9p-Del	Amp_1p22.3	0.193	1
APC	18q-Del	0.194	1
MLL3	18p-Del	0.194	1
MYB	Del_9p23	0.194	1
SF3B1	8p-Amp	0.194	1
MYH9	8p-Amp	0.194	1
MYH9	18q-Del	0.194	1
WDR52	8p-Amp	0.194	1
EIF4A2	Del_17p12	0.194	1
NF1	16p-Amp	0.194	1
18p-Del	Amp_6q21	0.194	1
Amp_1p22.3	Amp_17q23.1	0.194	1
MAP3K1	Amp_10q22.3	0.195	1
COL6A5	Amp_17q12	0.195	1
DST	Del_19p13.3	0.195	1
SPRR2B	Amp_8q24.21	0.195	1
CBFB	9q-Del	0.196	1
FOXA1	15q-Del	0.196	1
FOXA1	9q-Del	0.196	1
MAP2K4	Del_5q21.3	0.196	1
RUNX1	Amp_10p15.1	0.197	1
ERBB3	Del_5q21.3	0.197	1
CDKN1B	Del_9p21.3	0.198	1
ERBB2	Amp_20q13.2	0.198	1
MLL3	Del_15q13.1	0.198	1
SF3B1	6q-Del	0.198	1
WDR52	6q-Del	0.198	1
ANGPT4	Del_3p21.31	0.198	1
TBX3	Amp_11p13	0.199	1
AKD1	Del_6q27	0.199	1
DLG1	Amp_11q13.3	0.199	1
MED23	Del_5q11.2	0.199	1
NF1	Amp_11q14.1	0.199	1
ZMYM3	Del_5q11.2	0.199	1
11p-Del	Amp_14q21.1	0.199	1
Amp_14q21.1	Del_9q34.2	0.199	1
ARID1A	5q-Del	0.2	1
ATXN7L1	Del_22q13.32	0.2	1
OR4D10	Del_22q13.32	0.2	1
DLG1	Del_17p12	0.2	1
MR1	Del_22q13.32	0.2	1
SPEN	6q-Del	0.2	1
8q-Amp	Del_3p21.31	0.2	1
22q-Del	Amp_10q22.3	0.2	1
Amp_17q23.1	Del_16q24.3	0.2	1
ERBB2	8p-Del	0.201	1
AKD1	Del_8p23.2	0.201	1
TCP11	17p-Del	0.201	1
1q-Amp	Amp_12p13.33	0.201	1
AARS	Amp_1q44	0.202	1
MLL3	8p-Amp	0.202	1
SMAD2	Amp_8p11.21	0.202	1
ATXN2	Del_11q23.3	0.202	1
ATXN7L1	Amp_8p11.21	0.202	1
CCNL2	Amp_8p11.21	0.202	1
HLA-C	Amp_1q44	0.202	1
NFE2L3	Amp_1q44	0.202	1
OR4D10	Amp_8p11.21	0.202	1
ANKRD20A4	Del_16q24.3	0.202	1
EIF4A2	Del_6q15	0.202	1
MED23	Del_11q23.3	0.202	1
MR1	Amp_8p11.21	0.202	1
16q-Del	Amp_11p13	0.202	1
CDH1	MUC6	0.203	1
CDKN1B	11q-Del	0.203	1
KRAS	Amp_8q24.21	0.203	1
MAP2K4	Del_19q13.32	0.203	1
PTPN22	11q-Del	0.203	1
RPGR	13q-Del	0.203	1
ERBB3	13q-Del	0.203	1
ANGPT4	11q-Del	0.203	1
ATHL1	11q-Del	0.203	1
9p-Del	Amp_10p15.1	0.203	1
FBXW7	9p-Del	0.204	1
GATA3	PIK3R1	0.204	1
NCOR1	13q-Del	0.204	1
HRNR	Del_8p23.2	0.204	1
CASZ1	Del_4q35.1	0.204	1
CASZ1	Del_15q13.1	0.204	1
DOCK11	Amp_1q44	0.204	1
MLL4	Del_15q13.1	0.204	1
8p-Amp	Del_17q21.31	0.204	1
16q-Del	Amp_4q13.3	0.204	1
Amp_19q13.42	Del_12q23.1	0.204	1
Amp_19q13.42	Del_12q24.31	0.204	1
FAM20C	PIK3CA	0.205	1
MAP2K4	Del_9p23	0.205	1
NCOR1	TP53	0.205	1
PIK3CA	OR2T35	0.205	1
PIK3CA	PAX2	0.205	1
TAF1L	Amp_6p23	0.205	1
NFE2L3	1q-Amp	0.205	1
TNRC6B	Amp_6p23	0.205	1
FAM86B1	PIK3CA	0.206	1
KRAS	Del_13q14.2	0.206	1
PIK3CA	TCP10	0.206	1
PIK3CA	GYG2	0.206	1
SMAD2	Amp_20q13.2	0.206	1
OR4D10	Amp_20q13.2	0.206	1
OR6C76	Del_13q14.2	0.206	1
PCNXL2	14q-Del	0.206	1
PCNXL2	17q-Del	0.206	1
PCNXL2	Amp_19q12	0.206	1
TCP11	Del_13q14.2	0.206	1
1q-Amp	Del_7p22.3	0.206	1
MAP3K1	Amp_4q13.3	0.207	1
MLL3	Del_17q21.31	0.207	1
NCOR1	Amp_12p13.33	0.207	1
OR4D10	8p-Del	0.207	1
17q-Amp	Amp_12p13.33	0.207	1
ARID1A	Del_4p16.3	0.208	1
CBFB	Del_19p13.3	0.208	1
FOXA1	Del_19p13.3	0.208	1
NF1	Del_5q11.2	0.208	1
6q-Del	Amp_6q21	0.208	1
AQP12A	Amp_1q44	0.209	1
CASP8	Del_19p13.3	0.209	1
GATA3	Amp_17q12	0.209	1
HIST1H2BC	Amp_1q44	0.209	1
MYB	Del_19p13.3	0.209	1
PIWIL1	Del_6q15	0.209	1
PTEN	Amp_11q13.3	0.209	1
ANKRD12	Del_6q15	0.209	1
UBC	Del_19p13.3	0.209	1
MUC6	Amp_3q26.32	0.209	1
TARBP2	Amp_1q44	0.209	1
TGS1	Del_19p13.3	0.209	1
Amp_1p22.3	Amp_4q13.3	0.209	1
CTCF	Amp_8q24.21	0.21	1
GPS2	Del_8p23.2	0.21	1
RPGR	Amp_8q24.21	0.21	1
RPGR	Del_13q14.2	0.21	1
ERBB3	Amp_8q24.21	0.21	1
UBC	Amp_8p11.23	0.21	1
TNRC6B	Del_13q14.2	0.21	1
ARID1A	Amp_6q21	0.212	1
MLL3	Del_6q15	0.212	1
PIK3CA	17q-Del	0.212	1
RUNX1	9p-Del	0.212	1
GPRIN2	Del_18q23	0.212	1
NF1	5p-Amp	0.212	1
NF1	Amp_11p13	0.212	1
NF1	Amp_19q13.42	0.212	1
5p-Amp	Del_16q24.3	0.212	1
Amp_6q21	Del_16q24.3	0.212	1
KDM6A	Amp_17q12	0.213	1
GPS2	8q-Amp	0.214	1
HIST1H3B	8q-Amp	0.214	1
NCOR1	14q-Del	0.214	1
NCOR1	Del_21q11.2	0.214	1
EIF4A2	Del_6q27	0.214	1
MLL4	16p-Amp	0.214	1
NF1	Del_1p36.13	0.214	1
PCNXL2	Del_8p23.2	0.214	1
ZNF687	8q-Amp	0.214	1
17q-Amp	14q-Del	0.214	1
Amp_12p13.33	Amp_17q12	0.214	1
PIK3R1	8p-Amp	0.215	1
RUNX1	Del_17p12	0.215	1
ABCA8	8p-Amp	0.215	1
ABCA8	18q-Del	0.215	1
UBC	Del_14q24.1	0.215	1
BCORL1	8p-Amp	0.215	1
FRMPD2	Del_11p15.5	0.215	1
FRMPD2	Del_14q24.1	0.215	1
9p-Del	Amp_1q21.3	0.215	1
Amp_13q34	Del_12p13.1	0.215	1
HIST1H2BC	Amp_8p11.23	0.216	1
KRAS	Amp_8p11.23	0.216	1
MLL3	Amp_10q22.3	0.216	1
OR6C76	Amp_8p11.23	0.216	1
CABYR	Amp_8p11.23	0.216	1
MUC6	Amp_10p15.1	0.216	1
RHOA	Amp_8p11.23	0.216	1
SPEN	Amp_8q24.21	0.216	1
Amp_12p13.33	Del_1p22.1	0.216	1
AARS	Amp_1q21.3	0.217	1
ERBB2	Amp_12p13.33	0.217	1
FOXA1	Del_14q24.1	0.217	1
MAP3K1	DOCK11	0.217	1
WSCD2	20q-Amp	0.217	1
DNAH12	Del_5q21.3	0.217	1
MYH9	Del_5q21.3	0.217	1
NFE2L3	Amp_1q21.3	0.217	1
WDR52	Del_5q21.3	0.217	1
DLG1	Amp_11q14.1	0.217	1
DOCK11	Amp_12p13.33	0.217	1
CBFB	Amp_15q26.3	0.218	1
FOXA1	Amp_15q26.3	0.218	1
GATA3	Amp_8p11.23	0.218	1
GATA3	Amp_10q22.3	0.218	1
MAP2K4	Amp_3p25.1	0.218	1
MAP2K4	Del_7p22.3	0.218	1
MAP3K1	Amp_11p13	0.218	1
MAP3K1	Amp_19q13.42	0.218	1
Amp_1p22.3	Amp_15q26.3	0.218	1
FBXW7	6q-Del	0.219	1
MLL4	Del_22q13.32	0.219	1
16p-Amp	Del_19p13.3	0.219	1
7q-Amp	Amp_17q12	0.219	1
CTCF	Amp_1q44	0.22	1
20q-Amp	Amp_1q21.3	0.22	1
Amp_1p22.3	Del_17q21.31	0.22	1
Amp_1q44	Del_6q15	0.22	1
AQP12A	Amp_1q21.3	0.221	1
HIST1H2BC	Amp_1q21.3	0.221	1
PTEN	8q-Amp	0.221	1
TARBP2	Amp_1q21.3	0.221	1
Amp_4q13.3	Del_7q36.1	0.221	1
ERBB2	17q-Del	0.222	1
ERBB2	Amp_19q12	0.222	1
ERBB2	Del_21q11.2	0.222	1
RB1	Amp_8p11.21	0.222	1
HRNR	8p-Del	0.222	1
MLL4	Amp_8p11.21	0.222	1
1p-Del	Del_6p25.3	0.222	1
Amp_14q21.1	Del_6p25.3	0.222	1
Amp_17q12	Del_12q24.31	0.222	1
MLL3	5q-Del	0.223	1
IRS4	Del_9p23	0.223	1
ZMYM3	Del_10q23.31	0.223	1
18p-Del	Amp_10p15.1	0.223	1
TBX3	Del_10q23.31	0.224	1
WSCD2	Del_4p16.3	0.224	1
WSCD2	Del_5q11.2	0.224	1
ATXN2	22q-Del	0.224	1
CASZ1	Del_4p16.3	0.224	1
DLG1	Del_5q11.2	0.224	1
1q-Amp	17q-Del	0.224	1
1q-Amp	Del_6q27	0.224	1
14q-Del	Amp_17q23.1	0.224	1
TBX3	1p-Del	0.225	1
DNAH12	Amp_6p23	0.225	1
KDM6A	Amp_6p23	0.225	1
SPEN	Del_19q13.32	0.225	1
17q-Amp	Del_18q23	0.225	1
7q-Amp	Del_19q13.32	0.225	1
16q-Del	Amp_6p23	0.225	1
6q-Del	Amp_3q26.32	0.225	1
PTEN	Del_6p25.3	0.226	1
AKD1	Amp_11q13.3	0.226	1
16p-Amp	8p-Del	0.226	1
16p-Amp	Del_19q13.32	0.226	1
GATA3	MED23	0.227	1
NCOR1	Del_10q23.31	0.227	1
MED23	9p-Del	0.227	1
MLL4	Del_1p22.1	0.227	1
17q-Amp	Del_10q23.31	0.227	1
16q-Del	Del_4p16.3	0.227	1
8q-Amp	Del_22q13.32	0.228	1
MAP3K1	Del_1p36.13	0.229	1
PTEN	Amp_4q13.3	0.229	1
RB1	Amp_20q13.2	0.229	1
TBX3	9p-Del	0.229	1
TBX3	Del_10q26.3	0.229	1
AKD1	Del_6p25.3	0.229	1
ATXN7L1	22q-Del	0.229	1
OR4D10	22q-Del	0.229	1
MR1	22q-Del	0.229	1
SPEN	Del_17q21.31	0.229	1
7q-Amp	Del_17q21.31	0.229	1
PIK3CA	15q-Del	0.23	1
DST	Amp_10q22.3	0.23	1
MED23	Amp_17q23.1	0.23	1
TNRC6B	Del_2q37.3	0.23	1
17q-Amp	Del_17q21.31	0.23	1
CASP8	Del_4q35.1	0.231	1
CASP8	Del_15q13.1	0.231	1
MYB	Del_4q35.1	0.231	1
MYB	Del_15q13.1	0.231	1
UBC	Del_4q35.1	0.231	1
SPEN	Del_22q13.32	0.231	1
TGS1	Del_15q13.1	0.231	1
APC	13q-Del	0.232	1
ARID1A	Amp_10p15.1	0.232	1
RB1	8p-Del	0.232	1
TBX3	Del_12q23.1	0.232	1
TBX3	Del_12q24.31	0.232	1
DNAH12	13q-Del	0.232	1
MYH9	13q-Del	0.232	1
1q-Amp	9q-Del	0.232	1
20q-Amp	Del_19q13.32	0.232	1
AARS	Del_11q23.3	0.233	1
NCOR1	9p-Del	0.233	1
VCPIP1	Del_11q23.3	0.233	1
COL6A5	16p-Amp	0.233	1
HLA-C	Del_11q23.3	0.233	1
EIF4A2	Del_3p21.31	0.233	1
APC	TP53	0.234	1
MAP2K4	Amp_19p13.12	0.234	1
TBX3	Del_8p23.2	0.234	1
TP53	DNAH12	0.234	1
TP53	KDM6A	0.234	1
DST	Amp_11q13.3	0.234	1
1q-Amp	22q-Del	0.234	1
15q-Del	Amp_11q13.3	0.234	1
18q-Del	Amp_10p15.1	0.234	1
HLA-DRB5	TP53	0.235	1
MAP3K1	RB1	0.235	1
PIWIL1	Del_9q34.2	0.235	1
RPGR	11p-Del	0.235	1
RPGR	Del_9q34.2	0.235	1
TBX3	Amp_8q24.21	0.235	1
TP53	CCL13	0.235	1
TP53	OXCT2	0.235	1
TP53	RHBG	0.235	1
BCORL1	20p-Amp	0.235	1
MUC6	18p-Del	0.235	1
RBMX	18p-Del	0.235	1
TNRC6B	11p-Del	0.235	1
KRAS	Amp_11q13.3	0.236	1
PIK3CA	Amp_6q21	0.236	1
SF3B1	Del_16q24.3	0.236	1
CCDC82	Amp_11q13.3	0.236	1
5p-Amp	Del_7q36.1	0.236	1
Amp_11q13.3	Del_15q13.1	0.236	1
FAM86B1	13q-Del	0.237	1
MORN1	13q-Del	0.237	1
PSIP1	13q-Del	0.237	1
8p-Amp	Del_4q35.1	0.237	1
SF3B1	17p-Del	0.238	1
ATXN2	18q-Del	0.238	1
GPRIN2	Del_13q14.2	0.238	1
CASZ1	Amp_1p22.3	0.238	1
FRMPD2	Amp_11q13.3	0.238	1
IRS4	Del_19p13.3	0.238	1
MED23	Amp_1q44	0.238	1
MUC6	8p-Amp	0.238	1
PCNXL2	17p-Del	0.238	1
RBMX	18q-Del	0.238	1
ZNF687	Del_19p13.3	0.238	1
17p-Del	Amp_1p22.3	0.238	1
APC	Del_6q15	0.239	1
ERBB2	Del_18q23	0.239	1
TBX3	Amp_8p11.23	0.239	1
VCPIP1	11q-Del	0.239	1
COL6A5	5p-Amp	0.239	1
COL6A5	Amp_6q21	0.239	1
COL6A5	Amp_11p13	0.239	1
COL6A5	Amp_19q13.42	0.239	1
HLA-C	11q-Del	0.239	1
MYH9	Del_6q15	0.239	1
NFE2L3	11q-Del	0.239	1
OR2T35	Del_17p12	0.239	1
XBP1	Del_17p12	0.239	1
KCNN3	11q-Del	0.239	1
KDM6A	Del_6q15	0.239	1
TTPAL	Del_17p12	0.239	1
16p-Amp	Del_11p15.5	0.239	1
4q-Del	Amp_8p11.23	0.239	1
CBFB	Del_4q35.1	0.24	1
CBFB	Del_15q13.1	0.24	1
FOXA1	Del_4q35.1	0.24	1
FOXA1	Del_15q13.1	0.24	1
RPGR	Del_1p36.13	0.24	1
TBX3	TP53	0.24	1
HLA-C	16q-Del	0.24	1
KCNN3	16q-Del	0.24	1
SPEN	Amp_3p25.1	0.24	1
SPEN	Del_7p22.3	0.24	1
TNRC6B	Del_1p36.13	0.24	1
CBFB	5q-Del	0.241	1
CDH1	Amp_12q15	0.241	1
CDH1	Del_7q36.1	0.241	1
FHOD3	16p-Amp	0.241	1
TGS1	16p-Amp	0.241	1
USP36	Del_6q15	0.241	1
1p-Del	Del_12q24.31	0.241	1
Amp_14q21.1	Del_12q23.1	0.241	1
Amp_14q21.1	Del_12q24.31	0.241	1
TAF1L	Amp_1q21.3	0.242	1
MUC6	6q-Del	0.242	1
RBMX	6q-Del	0.242	1
SPEN	Del_8p23.2	0.242	1
CBFB	Amp_11q13.3	0.243	1
ERBB2	Del_17q21.31	0.243	1
ERBB2	Del_20p13	0.243	1
PIK3CA	4q-Del	0.243	1
SMAD2	Del_8p23.2	0.243	1
TP53	UBC	0.243	1
OR4D10	Del_8p23.2	0.243	1
MR1	Del_8p23.2	0.243	1
ACTL6B	Del_18q23	0.244	1
CASP8	20q-Amp	0.244	1
CASP8	Amp_11q14.1	0.244	1
GATA3	4p-Del	0.244	1
GATA3	Del_12q23.1	0.244	1
MYB	Amp_11q14.1	0.244	1
NCOR1	9q-Del	0.244	1
TBL1XR1	Del_18q23	0.244	1
FRMPD2	Amp_11q14.1	0.244	1
SPEN	Del_9p23	0.244	1
TGS1	Amp_11q14.1	0.244	1
6q-Del	Amp_10q22.3	0.244	1
ARID1A	Del_12q23.1	0.245	1
GPS2	Del_11p15.5	0.245	1
RB1	Amp_12q15	0.245	1
THEM5	Del_14q24.1	0.245	1
GPRIN2	Del_14q24.1	0.245	1
PPEF1	Del_11p15.5	0.245	1
FGFR2	Del_11p15.5	0.245	1
IRS4	Del_11p15.5	0.245	1
IRS4	Del_14q24.1	0.245	1
NF1	Del_12q23.1	0.245	1
NF1	Del_12q24.31	0.245	1
ZNF687	Del_14q24.1	0.245	1
6q-Del	Amp_10p15.1	0.245	1
ERBB2	Amp_17q23.1	0.246	1
MLL3	Del_4p16.3	0.246	1
NCOR1	18p-Del	0.246	1
TBX3	18q-Del	0.246	1
NF1	Del_13q14.2	0.246	1
CDH1	11p-Del	0.247	1
CDKN1B	Del_17q21.31	0.247	1
TP53	MORN1	0.247	1
ABCA8	Amp_6p23	0.247	1
DNAH12	Del_13q14.2	0.247	1
MYH9	Del_13q14.2	0.247	1
BCORL1	Amp_6p23	0.247	1
Amp_19q13.42	Del_5q21.3	0.247	1
ARID1A	9p-Del	0.248	1
PIK3CA	THEM5	0.248	1
PIK3CA	ZNF687	0.248	1
OR2T35	1q-Amp	0.248	1
OXCT2	1q-Amp	0.248	1
SPEN	8p-Del	0.248	1
RPGR	Del_6p25.3	0.249	1
RPGR	Del_8p23.2	0.249	1
ANKRD12	Del_6p25.3	0.249	1
ANKRD12	Del_8p23.2	0.249	1
MLL4	Del_10q23.31	0.249	1
PCNXL2	Amp_15q26.3	0.249	1
TNRC6B	Del_6p25.3	0.249	1
20p-Amp	Del_14q24.1	0.249	1
16q-Del	5q-Del	0.249	1
GPS2	Amp_8q24.21	0.25	1
MAP2K4	11p-Del	0.25	1
MAP2K4	Del_9q34.2	0.25	1
DST	16p-Amp	0.25	1
DOCK11	8q-Amp	0.25	1
FGFR2	Amp_8q24.21	0.25	1
FRMPD2	Del_17p12	0.25	1
IRS4	Amp_8q24.21	0.25	1
CASP8	Del_5q11.2	0.251	1
MYB	Del_4p16.3	0.251	1
MYB	Del_5q11.2	0.251	1
SF3B1	Del_2q37.3	0.251	1
TBX3	6q-Del	0.251	1
DNAH12	Del_2q37.3	0.251	1
FHOD3	Del_4p16.3	0.251	1
FXYD5	8q-Amp	0.251	1
UBC	Del_4p16.3	0.251	1
FRMPD2	Del_4p16.3	0.251	1
TGS1	Del_4p16.3	0.251	1
TGS1	Del_5q11.2	0.251	1
CDH1	COL6A5	0.252	1
KRAS	Del_22q13.32	0.252	1
MAP3K1	Amp_12q15	0.252	1
MAP3K1	Del_7q36.1	0.252	1
CCDC82	Del_22q13.32	0.252	1
RHOA	Del_22q13.32	0.252	1
TARBP2	Del_22q13.32	0.252	1
TCP11	Del_22q13.32	0.252	1
1q-Amp	Del_6p25.3	0.252	1
17q-Del	Amp_19q12	0.252	1
GATA3	WSCD2	0.253	1
GATA3	CASZ1	0.253	1
NCOR1	8p-Amp	0.253	1
PTEN	1q-Amp	0.253	1
WSCD2	9p-Del	0.253	1
DOCK11	1q-Amp	0.253	1
PCNXL2	Del_19p13.3	0.253	1
AQP12A	Amp_8p11.21	0.254	1
ARID1A	4p-Del	0.254	1
CBFB	5p-Amp	0.254	1
CBFB	Amp_6q21	0.254	1
CBFB	Amp_11p13	0.254	1
CBFB	Amp_19q13.42	0.254	1
FOXA1	Amp_6q21	0.254	1
KRAS	Amp_8p11.21	0.254	1
RUNX1	Amp_11q13.3	0.254	1
OR6C76	Amp_8p11.21	0.254	1
CCDC82	Amp_8p11.21	0.254	1
NF1	4p-Del	0.254	1
PSIP1	Del_6q27	0.254	1
RHOA	Amp_8p11.21	0.254	1
TPP2	Del_6q27	0.254	1
Amp_1q44	Amp_19q13.42	0.254	1
CASP8	Del_1p22.1	0.255	1
CTCF	Del_9p21.3	0.255	1
MYB	Del_1p22.1	0.255	1
PIWIL1	Del_9p21.3	0.255	1
RPGR	Del_11q23.3	0.255	1
FHOD3	Del_1p22.1	0.255	1
FRMPD2	Del_1p22.1	0.255	1
17q-Del	Amp_1p22.3	0.255	1
APC	Del_9q34.2	0.256	1
CDKN1B	Del_9p23	0.256	1
PTPN22	Del_9p23	0.256	1
RUNX1	20p-Amp	0.256	1
RUNX1	7p-Amp	0.256	1
SF3B1	Del_9q34.2	0.256	1
TBL1XR1	Del_9p23	0.256	1
MYH9	11p-Del	0.256	1
MYH9	Del_9q34.2	0.256	1
WDR52	11p-Del	0.256	1
CASZ1	4p-Del	0.256	1
KDM6A	Del_9q34.2	0.256	1
22q-Del	Amp_11p13	0.256	1
Amp_10q22.3	Del_22q13.32	0.256	1
COL6A5	Amp_8q24.21	0.257	1
DLG1	16q-Del	0.257	1
SPEN	Amp_19p13.12	0.257	1
HIST1H2BC	Amp_20q13.2	0.258	1
KRAS	Amp_20q13.2	0.258	1
MLC1	Amp_20q13.2	0.258	1
CCDC82	Amp_20q13.2	0.258	1
RHOA	Amp_20q13.2	0.258	1
CBFB	Amp_11q14.1	0.259	1
PIK3R1	8q-Amp	0.259	1
IRS4	Amp_1q44	0.259	1
MED23	20p-Amp	0.259	1
MED23	Amp_1q21.3	0.259	1
ZNF687	Amp_1q44	0.259	1
MAP2K4	Amp_4q13.3	0.26	1
MAP3K1	Del_3p21.31	0.26	1
MAP3K1	Del_9p21.3	0.26	1
WSCD2	18p-Del	0.26	1
OR6C76	8p-Del	0.26	1
CASZ1	18p-Del	0.26	1
CCDC82	8p-Del	0.26	1
RHOA	8p-Del	0.26	1
6q-Del	Amp_4q13.3	0.26	1
GPS2	Del_4q35.1	0.261	1
GPS2	Del_15q13.1	0.261	1
TBX3	Del_19q13.32	0.261	1
THEM5	Del_15q13.1	0.261	1
GPRIN2	Del_15q13.1	0.261	1
IRS4	Del_4q35.1	0.261	1
1q-Amp	9p-Del	0.261	1
1q-Amp	Del_10q26.3	0.261	1
8q-Amp	9q-Del	0.261	1
WSCD2	22q-Del	0.262	1
MLL4	22q-Del	0.262	1
TGS1	Amp_3q26.32	0.262	1
8q-Amp	Del_18q23	0.262	1
14q-Del	Amp_12q15	0.262	1
CDKN1B	8q-Amp	0.263	1
TBL1XR1	8q-Amp	0.263	1
TP53	Amp_11q13.3	0.263	1
FBXO17	17p-Del	0.263	1
AKT2	17p-Del	0.263	1
TNRC6B	Amp_11q13.3	0.263	1
Amp_3q26.32	Del_11q23.3	0.263	1
PTEN	8p-Del	0.264	1
TCP10	Del_1p36.13	0.264	1
GRHL2	Del_1p36.13	0.264	1
GYG2	Del_1p36.13	0.264	1
MORN1	Del_1p36.13	0.264	1
CASZ1	18q-Del	0.264	1
DLG1	8p-Amp	0.264	1
PSIP1	Del_1p36.13	0.264	1
TPP2	Del_1p36.13	0.264	1
USP36	Del_1p36.13	0.264	1
9q-Del	Amp_11p13	0.264	1
CDH1	16p-Amp	0.265	1
MAP3K1	Amp_14q21.1	0.265	1
FRMPD2	1q-Amp	0.265	1
16p-Amp	Del_1p22.1	0.265	1
1q-Amp	Amp_19p13.12	0.265	1
1q-Amp	Del_4q35.1	0.265	1
5p-Amp	Amp_6p23	0.265	1
5p-Amp	Del_3p21.31	0.265	1
Amp_11p13	Del_9p21.3	0.265	1
ERBB2	Amp_15q26.3	0.266	1
FAM86B1	1q-Amp	0.266	1
DNAH12	Amp_8p11.23	0.266	1
MYH9	Amp_8p11.23	0.266	1
UBC	Amp_1p22.3	0.266	1
C15orf39	1q-Amp	0.266	1
17p-Del	Amp_1q44	0.266	1
CBFB	Amp_13q34	0.267	1
FOXA1	Amp_13q34	0.267	1
AKD1	8p-Del	0.267	1
MYB	Amp_20q13.2	0.268	1
PTEN	Amp_19q12	0.268	1
PTEN	Del_21q11.2	0.268	1
WSCD2	Amp_17q23.1	0.268	1
FBXO17	Del_13q14.2	0.268	1
CASZ1	6q-Del	0.268	1
MKL1	Del_13q14.2	0.268	1
MLL4	6q-Del	0.268	1
5p-Amp	Del_7p22.3	0.268	1
C1QTNF5	Amp_17q12	0.269	1
FOXA1	Del_4p16.3	0.269	1
FOXA1	Del_5q11.2	0.269	1
HLA-DRB5	Del_11q23.3	0.269	1
MLL3	16p-Del	0.269	1
PTEN	Amp_3q26.32	0.269	1
RPGR	4q-Del	0.269	1
RUNX1	Amp_17q12	0.269	1
TBX3	7p-Amp	0.269	1
ANKRD12	4q-Del	0.269	1
HRNR	Amp_8p11.23	0.269	1
RIBC1	Del_11q23.3	0.269	1
TNRC6B	4q-Del	0.269	1
MAP2K4	Del_4q35.1	0.27	1
MLL3	Del_19p13.3	0.27	1
SF3B1	Del_6p25.3	0.27	1
DNAH12	Amp_8q24.21	0.27	1
MYH9	Amp_8q24.21	0.27	1
UBC	Amp_10p15.1	0.27	1
WDR52	Del_6p25.3	0.27	1
KDM6A	Amp_8q24.21	0.27	1
TGS1	Amp_10p15.1	0.27	1
APC	Del_1p36.13	0.271	1
DNAH12	Del_1p36.13	0.271	1
MYH9	Del_1p36.13	0.271	1
FGFR2	16p-Amp	0.271	1
FRMPD2	8p-Del	0.271	1
RBMX	Amp_6p23	0.271	1
SPEN	Del_19p13.3	0.271	1
ZNF687	16p-Amp	0.271	1
FBXW7	Del_6q15	0.272	1
HRNR	22q-Del	0.272	1
17q-Amp	17p-Del	0.272	1
CDKN1B	Del_8p23.2	0.273	1
COL6A5	Amp_10p15.1	0.273	1
COL6A5	Del_12q23.1	0.273	1
XBP1	16q-Del	0.273	1
PCNXL2	5q-Del	0.273	1
TTPAL	16q-Del	0.273	1
ZNF362	16q-Del	0.273	1
CBFB	Del_6q27	0.274	1
CTCF	Amp_12p13.33	0.274	1
CTCF	Del_9q21.11	0.274	1
FOXA1	Del_6q27	0.274	1
MAP3K1	TNRC6B	0.274	1
PIK3R1	Del_2q37.3	0.274	1
RPGR	Del_9q21.11	0.274	1
TAF1L	Amp_12p13.33	0.274	1
ABCA8	Del_2q37.3	0.274	1
ANKRD12	Amp_12p13.33	0.274	1
ANKRD12	Del_9q21.11	0.274	1
ERBB3	Amp_12p13.33	0.274	1
GRHL2	Amp_8q24.21	0.274	1
SPEN	Amp_10q22.3	0.274	1
TNRC6B	Amp_12p13.33	0.274	1
14q-Del	Amp_14q21.1	0.274	1
GPS2	20q-Amp	0.275	1
PIK3CA	SMAD4	0.275	1
TCP10	Del_9p21.3	0.275	1
DST	Del_1p22.1	0.275	1
GPRIN2	20q-Amp	0.275	1
MORN1	Del_9p21.3	0.275	1
FGFR2	20q-Amp	0.275	1
TPP2	Del_3p21.31	0.275	1
USP36	Del_9p21.3	0.275	1
1q-Amp	Amp_11q14.1	0.275	1
Amp_6q21	Amp_8p11.23	0.275	1
PTEN	Del_7q36.1	0.276	1
Amp_19q12	Del_9p21.3	0.276	1
MYB	Del_10q23.31	0.277	1
UBC	Del_10q23.31	0.277	1
7q-Amp	Del_2q37.3	0.277	1
CBFB	Amp_8p11.21	0.278	1
CDKN1B	Del_14q24.1	0.278	1
MLL3	Del_1p36.13	0.278	1
PIK3CA	MUC6	0.278	1
TBL1XR1	Del_11p15.5	0.278	1
TBX3	Del_7p22.3	0.278	1
PPEF1	Amp_1q21.3	0.278	1
ANGPT4	Del_14q24.1	0.278	1
ZNF687	Amp_1q21.3	0.278	1
Amp_19q13.42	Del_1p22.1	0.278	1
CTCF	14q-Del	0.279	1
CTCF	17q-Del	0.279	1
CTCF	Amp_19q12	0.279	1
CTCF	Del_21q11.2	0.279	1
FBXW7	11p-Del	0.279	1
FBXW7	Del_9q34.2	0.279	1
GATA3	Del_6q15	0.279	1
RPGR	Amp_19q12	0.279	1
TAF1L	Del_21q11.2	0.279	1
ANKRD12	14q-Del	0.279	1
ANKRD12	Amp_19q12	0.279	1
ANKRD12	Del_21q11.2	0.279	1
ERBB3	Del_21q11.2	0.279	1
TNRC6B	Del_21q11.2	0.279	1
Amp_11p13	Del_22q13.32	0.279	1
EPDR1	Amp_8p11.23	0.28	1
GATA3	MAP3K1	0.28	1
NCOR1	Del_19p13.3	0.28	1
TCP10	11q-Del	0.28	1
TP53	NF1	0.28	1
DNAH12	Del_12p13.1	0.28	1
FBXO17	Amp_8p11.23	0.28	1
C15orf39	11q-Del	0.28	1
CASP8	Del_10q26.3	0.281	1
FOXA1	1p-Del	0.281	1
GATA3	MYB	0.281	1
GATA3	FHOD3	0.281	1
MYB	9p-Del	0.281	1
MYB	Del_10q26.3	0.281	1
RUNX1	Amp_19p13.12	0.281	1
HLA-C	Del_18q23	0.281	1
MED23	Amp_17q12	0.281	1
RBMX	Amp_17q12	0.281	1
APC	Amp_1q44	0.282	1
GPS2	Del_4p16.3	0.282	1
GPS2	Del_5q11.2	0.282	1
MLL3	Amp_1p22.3	0.282	1
DNAH12	Amp_1q44	0.282	1
GPRIN2	Del_4p16.3	0.282	1
GPRIN2	Del_5q11.2	0.282	1
HRNR	Amp_17q23.1	0.282	1
IRS4	Del_5q11.2	0.282	1
Amp_1p22.3	Del_17p12	0.282	1
ARID1A	7p-Amp	0.283	1
CDH1	15q-Del	0.283	1
KRAS	22q-Del	0.283	1
NCOR1	7q-Amp	0.283	1
THEM5	Amp_11q13.3	0.283	1
DST	17q-Del	0.283	1
DST	Amp_19q12	0.283	1
DST	Del_21q11.2	0.283	1
OR6C76	22q-Del	0.283	1
ZNF41	Amp_11q13.3	0.283	1
CCDC82	22q-Del	0.283	1
RHOA	22q-Del	0.283	1
SPEN	Del_14q24.1	0.283	1
TARBP2	22q-Del	0.283	1
TCP11	22q-Del	0.283	1
17q-Amp	7q-Amp	0.283	1
7q-Amp	Amp_4q13.3	0.283	1
CTCF	Amp_12q15	0.284	1
GATA3	16p-Del	0.284	1
KRAS	Del_16q24.3	0.284	1
PIK3CA	COL6A5	0.284	1
PIK3CA	Del_17p12	0.284	1
RPGR	Amp_12q15	0.284	1
TAF1L	Amp_12q15	0.284	1
ANKRD12	Amp_12q15	0.284	1
ATXN7L1	13q-Del	0.284	1
CCNL2	13q-Del	0.284	1
OR4D10	13q-Del	0.284	1
ANKRD20A4	13q-Del	0.284	1
TFE3	13q-Del	0.284	1
TNRC6B	Amp_12q15	0.284	1
TNRC6B	Del_7q36.1	0.284	1
20q-Amp	Del_12p13.1	0.284	1
FOXA1	Amp_3q26.32	0.285	1
MYB	4p-Del	0.285	1
WSCD2	20p-Amp	0.285	1
DST	Amp_17q12	0.285	1
UBC	4p-Del	0.285	1
FRMPD2	4p-Del	0.285	1
TGS1	4p-Del	0.285	1
5p-Amp	Del_11q23.3	0.285	1
CDH1	HIST1H3B	0.286	1
CDH1	THEM5	0.286	1
ERBB2	Del_13q14.2	0.286	1
MAP3K1	15q-Del	0.286	1
MAP3K1	Del_20p13	0.286	1
ZNF41	Del_1p22.1	0.286	1
FGFR2	Del_1p22.1	0.286	1
IRS4	Del_1p22.1	0.286	1
ZNF687	Del_1p22.1	0.286	1
APC	Del_9p21.3	0.287	1
CDH1	Del_7p22.3	0.287	1
FOXA1	Amp_20q13.2	0.287	1
HIST1H2BC	Amp_17q23.1	0.287	1
KRAS	Amp_17q23.1	0.287	1
NCOR1	Del_3p21.31	0.287	1
ICOSLG	Amp_17q23.1	0.287	1
MYH9	Del_9p21.3	0.287	1
CEP57	Amp_17q23.1	0.287	1
PCNXL2	Amp_6q21	0.287	1
17q-Amp	Del_3p21.31	0.287	1
6q-Del	Amp_15q26.3	0.287	1
Amp_19q12	Del_12q24.31	0.287	1
Amp_1q21.3	Amp_12q15	0.288	1
Amp_13q34	Del_7p22.3	0.288	1
CASP8	18p-Del	0.289	1
CBFB	Del_12q24.31	0.289	1
CDKN1B	Del_13q14.2	0.289	1
MYB	18p-Del	0.289	1
SMAD2	Del_6q15	0.289	1
WSCD2	Del_5q21.3	0.289	1
ATXN7L1	Del_6q15	0.289	1
FHOD3	18p-Del	0.289	1
OR4D10	Del_6q15	0.289	1
ANKRD20A4	Del_6q15	0.289	1
CASZ1	Del_5q21.3	0.289	1
DLG1	Del_5q21.3	0.289	1
FRMPD2	18p-Del	0.289	1
APC	4q-Del	0.29	1
MAP3K1	4p-Del	0.29	1
PIWIL1	Del_22q13.32	0.29	1
RPGR	Del_22q13.32	0.29	1
SF3B1	4q-Del	0.29	1
ABCA8	Del_13q14.2	0.29	1
ANKRD12	Del_22q13.32	0.29	1
DNAH12	4q-Del	0.29	1
MYH9	4q-Del	0.29	1
ERBB2	5q-Del	0.291	1
FBXW7	Del_6q27	0.291	1
TBX3	Del_18q23	0.291	1
NF1	Amp_3p25.1	0.291	1
NF1	Del_7p22.3	0.291	1
17q-Del	Amp_1q44	0.291	1
Amp_1q44	Del_22q13.32	0.291	1
Amp_13q34	Amp_17q12	0.291	1
Amp_19q12	Del_6q15	0.291	1
DLG1	Del_8p23.2	0.292	1
5p-Amp	13q-Del	0.292	1
AARS	Del_16q24.3	0.293	1
CASP8	18q-Del	0.293	1
GATA3	17q-Del	0.293	1
MYB	18q-Del	0.293	1
PIK3R1	Del_6p25.3	0.293	1
PTEN	Del_8p23.2	0.293	1
RUNX1	Del_11q23.3	0.293	1
ABCA8	Del_6p25.3	0.293	1
FHOD3	18q-Del	0.293	1
GPRIN2	Amp_3q26.32	0.293	1
HLA-C	Del_9p23	0.293	1
HLA-C	Del_16q24.3	0.293	1
NFE2L3	Del_9p23	0.293	1
UBC	8p-Amp	0.293	1
UBC	18q-Del	0.293	1
EIF4A2	Del_9p23	0.293	1
FRMPD2	18q-Del	0.293	1
16p-Amp	Amp_19p13.12	0.293	1
9p-Del	Amp_19q12	0.293	1
Amp_4q13.3	Del_14q24.1	0.293	1
APC	11q-Del	0.294	1
CTCF	Amp_8p11.21	0.294	1
RUNX1	Amp_8p11.21	0.294	1
ERBB3	Amp_8p11.21	0.294	1
WDR52	11q-Del	0.294	1
22q-Del	Amp_17q12	0.294	1
ACTL6B	Del_15q13.1	0.295	1
CDKN1B	Del_15q13.1	0.295	1
TBL1XR1	Del_15q13.1	0.295	1
TBX3	Amp_19p13.12	0.295	1
PRICKLE3	Del_15q13.1	0.295	1
ANGPT4	Del_15q13.1	0.295	1
8q-Amp	18p-Del	0.295	1
APC	Del_9q21.11	0.296	1
CBFB	Amp_10p15.1	0.296	1
FOXA1	Amp_10p15.1	0.296	1
MAP3K1	DNAH12	0.296	1
SF3B1	Del_9q21.11	0.296	1
FHOD3	Del_16q24.3	0.296	1
MYH9	Amp_12p13.33	0.296	1
MYH9	Del_9q21.11	0.296	1
WDR52	Del_9q21.11	0.296	1
ASB10	Del_11q23.3	0.297	1
CASP8	6q-Del	0.297	1
GPS2	Amp_1p22.3	0.297	1
TBX3	Amp_17q12	0.297	1
COL6A5	Del_11q23.3	0.297	1
GRHL2	Del_11q23.3	0.297	1
UBC	6q-Del	0.297	1
C15orf39	Del_11q23.3	0.297	1
FRMPD2	6q-Del	0.297	1
1q-Amp	Del_1p36.13	0.297	1
Amp_12q15	Del_10q23.31	0.297	1
WSCD2	Amp_8q24.21	0.298	1
CASZ1	Amp_6p23	0.298	1
MAP2K4	PTEN	0.299	1
ATXN2	Del_2q37.3	0.299	1
GRHL2	Amp_1q21.3	0.299	1
C15orf39	Amp_1q21.3	0.299	1
MED23	Del_2q37.3	0.299	1
PSIP1	Amp_1q21.3	0.299	1
ZMYM3	Del_2q37.3	0.299	1
5q-Del	Amp_11q13.3	0.299	1
Amp_19p13.12	Del_6q15	0.299	1
MAP2K4	4q-Del	0.3	1
PTEN	Del_20p13	0.3	1
APC	14q-Del	0.301	1
APC	Amp_19q12	0.301	1
APC	Del_21q11.2	0.301	1
ARID1A	Del_5q21.3	0.301	1
CTCF	15q-Del	0.301	1
CTCF	9q-Del	0.301	1
ERBB2	Del_11q23.3	0.301	1
GPS2	Amp_10p15.1	0.301	1
PIK3CA	Amp_10q22.3	0.301	1
PIWIL1	9q-Del	0.301	1
RPGR	9q-Del	0.301	1
SF3B1	17q-Del	0.301	1
SF3B1	Amp_19q12	0.301	1
SF3B1	Del_21q11.2	0.301	1
SMAD2	Del_6q27	0.301	1
ANKRD12	9q-Del	0.301	1
ATXN7L1	Del_6q27	0.301	1
DLX6	Amp_11q13.3	0.301	1
DNAH12	Del_21q11.2	0.301	1
ERBB3	15q-Del	0.301	1
FXYD5	Amp_11q13.3	0.301	1
MYH9	Del_21q11.2	0.301	1
WDR52	14q-Del	0.301	1
WDR52	Amp_19q12	0.301	1
WDR52	Del_21q11.2	0.301	1
ZNF41	Amp_10p15.1	0.301	1
DOCK11	Del_11q23.3	0.301	1
KDM6A	14q-Del	0.301	1
KDM6A	Del_21q11.2	0.301	1
NF1	Del_5q21.3	0.301	1
SPEN	22q-Del	0.301	1
Amp_8p11.23	Del_4q35.1	0.301	1
GPS2	TP53	0.302	1
HIST1H3B	TP53	0.302	1
ATXN2	13q-Del	0.302	1
PCNXL2	16p-Amp	0.302	1
8p-Amp	Del_18q23	0.302	1
Amp_10q22.3	Del_17p12	0.302	1
CASP8	Del_11q23.3	0.303	1
MYB	Del_11q23.3	0.303	1
DNAH12	Del_11q23.3	0.303	1
FHOD3	Del_11q23.3	0.303	1
KDM6A	Del_11q23.3	0.303	1
1q-Amp	Del_12p13.1	0.303	1
Amp_8p11.23	Del_7q36.1	0.303	1
ERBB2	5p-Amp	0.304	1
ERBB2	Amp_19q13.42	0.304	1
NCOR1	8p-Del	0.304	1
ATXN2	Del_9q34.2	0.304	1
COL6A5	Del_19q13.32	0.304	1
MED23	11p-Del	0.304	1
MED23	Del_9q34.2	0.304	1
PSIP1	16q-Del	0.304	1
SLC35B2	16q-Del	0.304	1
ZMYM3	11p-Del	0.304	1
ZMYM3	Del_9q34.2	0.304	1
APC	Amp_1q21.3	0.305	1
CTCF	8p-Del	0.305	1
PTPN22	Amp_8p11.23	0.305	1
SF3B1	Amp_1q21.3	0.305	1
DNAH12	Amp_1q21.3	0.305	1
DNAH12	Del_8p23.2	0.305	1
ANGPT4	Amp_8p11.23	0.305	1
FRMPD2	22q-Del	0.305	1
KDM6A	Del_8p23.2	0.305	1
SPEN	Del_6p25.3	0.305	1
CDKN1B	16p-Amp	0.306	1
FBXW7	Del_1p36.13	0.306	1
ABCA8	Del_1p36.13	0.306	1
ANGPT4	16p-Amp	0.306	1
MED23	8q-Amp	0.306	1
APC	Amp_12q15	0.307	1
GATA3	Del_7q36.1	0.307	1
HIST1H3B	Del_22q13.32	0.307	1
KDM6A	Amp_12q15	0.307	1
KDM6A	Del_7q36.1	0.307	1
PCNXL2	20q-Amp	0.307	1
ZNF687	Del_22q13.32	0.307	1
ARID1A	Amp_19p13.12	0.308	1
MAP2K4	Amp_12p13.33	0.308	1
MAP2K4	Del_9q21.11	0.308	1
NF1	Amp_19p13.12	0.308	1
ACTL6B	20q-Amp	0.309	1
CDKN1B	Amp_11q14.1	0.309	1
ERBB2	Amp_8p11.23	0.309	1
RUNX1	17q-Amp	0.309	1
TBL1XR1	20q-Amp	0.309	1
GPRIN2	Del_10q23.31	0.309	1
FGFR2	Del_10q23.31	0.309	1
IRS4	Del_10q23.31	0.309	1
ZNF687	Del_10q23.31	0.309	1
AARS	Del_19p13.3	0.31	1
FBXW7	Amp_8p11.23	0.31	1
ATXN2	Del_6q15	0.31	1
FXYD5	Amp_1q44	0.31	1
HRNR	16p-Amp	0.31	1
NFE2L3	Del_19p13.3	0.31	1
SHISA4	Amp_1q44	0.31	1
ZMYM3	Del_6q15	0.31	1
ZNF687	Amp_8p11.21	0.31	1
MYB	Amp_17q23.1	0.311	1
PTEN	Del_16q24.3	0.311	1
HRNR	11q-Del	0.311	1
TGS1	Amp_17q23.1	0.311	1
Amp_1p22.3	Del_20p13	0.311	1
MYB	16q-Del	0.312	1
ZFP36L2	Del_1p36.13	0.312	1
ATXN7L1	Del_1p36.13	0.312	1
CCNL2	Del_1p36.13	0.312	1
DOCK11	16q-Del	0.312	1
CBFB	9p-Del	0.313	1
ERBB2	Del_4q35.1	0.313	1
FOXA1	GATA3	0.313	1
GATA3	THEM5	0.313	1
GATA3	PPEF1	0.313	1
NCOR1	5q-Del	0.313	1
SF3B1	16q-Del	0.313	1
TBX3	Amp_10q22.3	0.313	1
IRS4	9p-Del	0.313	1
KDM6A	16q-Del	0.313	1
SPEN	Del_4q35.1	0.313	1
17q-Amp	5q-Del	0.313	1
CASP8	20p-Amp	0.314	1
CDH1	18q-Del	0.314	1
FOXA1	Amp_8q24.21	0.314	1
16p-Amp	Amp_10p15.1	0.314	1
Amp_1p22.3	Amp_11q14.1	0.314	1
GATA3	17p-Del	0.315	1
MAP2K4	Del_1p22.1	0.315	1
PIK3CA	Amp_1q21.3	0.315	1
PCNXL2	1p-Del	0.315	1
AARS	Del_14q24.1	0.316	1
MAP2K4	14q-Del	0.316	1
MAP2K4	Amp_19q12	0.316	1
RB1	Del_11p15.5	0.316	1
ZFP36L1	Del_11p15.5	0.316	1
GPRIN2	Amp_20q13.2	0.316	1
EIF4A2	Del_11p15.5	0.316	1
EIF4A2	Del_14q24.1	0.316	1
1q-Amp	14q-Del	0.316	1
7p-Amp	Del_10q23.31	0.316	1
CDKN1B	Del_5q11.2	0.317	1
GPS2	4p-Del	0.317	1
PTPN22	Del_5q11.2	0.317	1
RUNX1	Del_19p13.3	0.317	1
TBL1XR1	Del_5q11.2	0.317	1
FBXO17	Del_22q13.32	0.317	1
GPRIN2	4p-Del	0.317	1
HRNR	20q-Amp	0.317	1
IRS4	4p-Del	0.317	1
ZNF687	4p-Del	0.317	1
CASP8	Del_5q21.3	0.318	1
ERBB2	Amp_13q34	0.318	1
UBC	Del_5q21.3	0.318	1
MUC6	Del_6p25.3	0.318	1
PCNXL2	Del_4p16.3	0.318	1
RBMX	Del_6p25.3	0.318	1
ZMYM3	Del_6p25.3	0.318	1
7p-Amp	Del_3p21.31	0.318	1
4p-Del	Amp_12q15	0.318	1
EPDR1	Amp_8p11.21	0.319	1
FBXW7	Del_9q21.11	0.319	1
FOXA1	4p-Del	0.319	1
GATA3	Del_9q34.2	0.319	1
GPS2	8p-Del	0.319	1
PIK3R1	Amp_12p13.33	0.319	1
ABCA8	Amp_12p13.33	0.319	1
FBXO17	Amp_8p11.21	0.319	1
FXYD5	Amp_8p11.21	0.319	1
CBFB	Del_19q13.32	0.32	1
CDH1	PTPN22	0.32	1
CDH1	PRICKLE3	0.32	1
CDH1	ATHL1	0.32	1
CDH1	1q-Del	0.32	1
MLL3	9q-Del	0.32	1
PTPN22	Del_1p22.1	0.32	1
7q-Amp	Del_12p13.1	0.32	1
RUNX1	Del_9q34.2	0.321	1
SMAD4	TP53	0.321	1
TP53	CCNL2	0.321	1
TP53	OR4D10	0.321	1
TP53	MR1	0.321	1
GPRIN2	18p-Del	0.321	1
IRS4	18p-Del	0.321	1
ZNF687	18p-Del	0.321	1
BCORL1	Del_9p21.3	0.322	1
PTEN	7q-Amp	0.323	1
ZFP36L2	Del_3p21.31	0.323	1
ATXN7L1	Del_9p21.3	0.323	1
CCNL2	Del_9p21.3	0.323	1
FXYD5	Amp_20q13.2	0.323	1
ANKRD20A4	Del_3p21.31	0.323	1
MR1	Del_9p21.3	0.323	1
APC	15q-Del	0.324	1
APC	9q-Del	0.324	1
ASB10	Del_18q23	0.324	1
FAM86B1	Del_18q23	0.324	1
SF3B1	9q-Del	0.324	1
TCP10	Del_18q23	0.324	1
DNAH12	15q-Del	0.324	1
FBXO17	Amp_1q21.3	0.324	1
FXYD5	Amp_1q21.3	0.324	1
GRHL2	Del_18q23	0.324	1
MYH9	15q-Del	0.324	1
MYH9	9q-Del	0.324	1
SHISA4	Amp_1q21.3	0.324	1
WDR52	9q-Del	0.324	1
C15orf39	Del_18q23	0.324	1
KDM6A	9q-Del	0.324	1
KDM6A	Del_20p13	0.324	1
PSIP1	Del_18q23	0.324	1
TPP2	Del_18q23	0.324	1
18q-Del	Amp_19q12	0.324	1
CTCF	Del_18q23	0.325	1
FBXW7	17q-Del	0.325	1
FBXW7	Del_21q11.2	0.325	1
GPS2	8p-Amp	0.325	1
KRAS	Amp_17q12	0.325	1
PIK3CA	20q-Amp	0.325	1
PIK3R1	14q-Del	0.325	1
RPGR	Amp_15q26.3	0.325	1
TAF1L	Amp_15q26.3	0.325	1
ABCA8	17q-Del	0.325	1
ABCA8	Amp_19q12	0.325	1
ERBB3	Amp_15q26.3	0.325	1
GPRIN2	18q-Del	0.325	1
PPEF1	8p-Amp	0.325	1
CCDC82	Amp_17q12	0.325	1
CEP57	Amp_17q12	0.325	1
FGFR2	8p-Amp	0.325	1
IRS4	18q-Del	0.325	1
SPEN	Del_9p21.3	0.325	1
TCP11	Amp_17q12	0.325	1
ZNF687	8p-Amp	0.325	1
ZNF687	18q-Del	0.325	1
7q-Amp	Del_3p21.31	0.325	1
DLX6	8p-Del	0.326	1
CDC42EP1	8p-Del	0.326	1
DLG1	Del_2q37.3	0.326	1
CASP8	Amp_6p23	0.327	1
TCP10	Del_17q21.31	0.327	1
NF1	Amp_10q22.3	0.327	1
TGS1	Amp_6p23	0.327	1
ZNF687	1q-Amp	0.327	1
Amp_1q21.3	Del_22q13.32	0.327	1
CBFB	7p-Amp	0.328	1
CDKN1B	Amp_3q26.32	0.328	1
FOXA1	7p-Amp	0.328	1
TBL1XR1	Amp_3q26.32	0.328	1
ATXN7L1	Del_17p12	0.328	1
ANGPT4	Amp_3q26.32	0.328	1
DOCK11	16p-Amp	0.328	1
MUC6	17p-Del	0.328	1
ZMYM3	Del_6q27	0.328	1
RUNX1	Del_14q24.1	0.329	1
THEM5	6q-Del	0.329	1
ZFP36L2	11q-Del	0.329	1
ATXN7L1	11q-Del	0.329	1
GPRIN2	6q-Del	0.329	1
OR4D10	11q-Del	0.329	1
ZNF41	6q-Del	0.329	1
ANKRD20A4	11q-Del	0.329	1
MR1	11q-Del	0.329	1
TFE3	11q-Del	0.329	1
ZMYM3	Del_12p13.1	0.329	1
17q-Amp	Del_15q13.1	0.329	1
FBXW7	11q-Del	0.33	1
KRAS	Del_8p23.2	0.33	1
RPGR	Del_17q21.31	0.33	1
ABCA8	Del_7q36.1	0.33	1
HRNR	Del_4p16.3	0.33	1
HRNR	Del_5q11.2	0.33	1
MLC1	Del_8p23.2	0.33	1
OR6C76	Del_8p23.2	0.33	1
BCORL1	Amp_12q15	0.33	1
TNRC6B	Del_17q21.31	0.33	1
CBFB	18q-Del	0.331	1
FAM20C	8q-Amp	0.331	1
MLL4	11p-Del	0.331	1
ZBTB7C	8q-Amp	0.331	1
ZNF362	8q-Amp	0.331	1
Amp_19q12	Del_9p23	0.331	1
MLL3	4p-Del	0.332	1
PTPN22	Amp_1p22.3	0.332	1
DNAH12	Del_22q13.32	0.332	1
WDR52	Del_22q13.32	0.332	1
ATHL1	Amp_1p22.3	0.332	1
KDM6A	Del_22q13.32	0.332	1
1q-Del	Amp_1p22.3	0.332	1
NCOR1	5p-Amp	0.333	1
NCOR1	Amp_6q21	0.333	1
HRNR	17q-Del	0.333	1
DOCK11	1p-Del	0.333	1
16p-Amp	Del_21q11.2	0.333	1
8p-Amp	Del_19q13.32	0.333	1
AARS	Del_4q35.1	0.334	1
AARS	Del_15q13.1	0.334	1
PTEN	Del_6q27	0.334	1
VCPIP1	Del_15q13.1	0.334	1
ZFP36L1	Del_4q35.1	0.334	1
DOCK11	20q-Amp	0.334	1
DOCK11	Amp_11q14.1	0.334	1
13q-Del	Amp_13q34	0.334	1
Amp_19q12	Del_6q27	0.334	1
PTEN	Amp_17q23.1	0.335	1
DST	Del_8p23.2	0.335	1
5p-Amp	17p-Del	0.335	1
CBFB	Amp_3p25.1	0.336	1
CBFB	Del_7p22.3	0.336	1
CDKN1B	Amp_11q13.3	0.336	1
FOXA1	Del_7p22.3	0.336	1
PTPN22	Amp_10p15.1	0.336	1
RUNX1	Del_6q27	0.336	1
TBL1XR1	Amp_10p15.1	0.336	1
TBL1XR1	Amp_11q13.3	0.336	1
DNAH12	Amp_8p11.21	0.336	1
20q-Amp	Del_12q24.31	0.336	1
CDH1	HRNR	0.337	1
ERBB2	13q-Del	0.337	1
FOXA1	6q-Del	0.337	1
TCP10	Del_9p23	0.337	1
DST	18p-Del	0.337	1
C15orf39	Del_9p23	0.337	1
DOCK11	13q-Del	0.337	1
USP36	Del_9p23	0.337	1
7q-Amp	11q-Del	0.337	1
Amp_1p22.3	Amp_20q13.2	0.337	1
Amp_19q13.42	Del_14q24.1	0.337	1
PIK3CA	5p-Amp	0.338	1
TBX3	Del_6q15	0.338	1
COL6A5	Amp_19p13.12	0.338	1
MED23	Del_13q14.2	0.338	1
ZMYM3	Del_13q14.2	0.338	1
MAP2K4	Amp_17q12	0.339	1
MLL3	Amp_8q24.21	0.339	1
Amp_1p22.3	Del_8p23.2	0.339	1
Amp_10q22.3	Amp_13q34	0.339	1
KRAS	13q-Del	0.34	1
OR6C76	13q-Del	0.34	1
CCDC82	13q-Del	0.34	1
EIF4A2	17p-Del	0.34	1
KCNN3	17p-Del	0.34	1
TCP11	13q-Del	0.34	1
9p-Del	Amp_11p13	0.34	1
Amp_11p13	Del_10q26.3	0.34	1
MAP3K1	Amp_11q13.3	0.341	1
TBX3	Del_9q34.2	0.341	1
HRNR	Amp_12q15	0.341	1
ANKRD20A4	1q-Amp	0.341	1
PIK3R1	Amp_8q24.21	0.342	1
TBX3	8p-Del	0.342	1
16p-Amp	Del_9q34.2	0.342	1
ACTL6B	Amp_1q44	0.343	1
GATA3	Amp_3p25.1	0.343	1
MAP3K1	SPEN	0.343	1
PIWIL1	Del_9p23	0.343	1
AKD1	Amp_11p13	0.343	1
AKD1	Amp_19q13.42	0.343	1
ATHL1	Amp_1q44	0.343	1
SPEN	Amp_12p13.33	0.343	1
20p-Amp	16p-Del	0.343	1
AARS	16p-Amp	0.344	1
CBFB	17p-Del	0.344	1
MAP2K4	HRNR	0.344	1
PTEN	TP53	0.344	1
RAB42	17p-Del	0.344	1
ATXN2	Del_1p36.13	0.344	1
DNAH12	Amp_20q13.2	0.344	1
DST	8p-Amp	0.344	1
HLA-C	16p-Amp	0.344	1
MYH9	Amp_20q13.2	0.344	1
NFE2L3	16p-Amp	0.344	1
OR2T35	17p-Del	0.344	1
XBP1	17p-Del	0.344	1
ANGPT4	Del_10q23.31	0.344	1
EIF4A2	16p-Amp	0.344	1
KCNN3	16p-Amp	0.344	1
KDM6A	Amp_20q13.2	0.344	1
MED23	Del_1p36.13	0.344	1
RBMX	Del_1p36.13	0.344	1
TTPAL	17p-Del	0.344	1
17q-Del	Amp_11q14.1	0.344	1
HIST1H2BC	Del_6q15	0.345	1
KRAS	Del_6q15	0.345	1
OR6C76	Del_6q15	0.345	1
CABYR	Del_6q15	0.345	1
CCDC82	Del_6q15	0.345	1
DOCK11	Amp_8q24.21	0.345	1
MED23	Amp_12p13.33	0.345	1
MED23	Del_9q21.11	0.345	1
RHOA	Del_6q15	0.345	1
TARBP2	Del_6q15	0.345	1
TCP11	Del_6q15	0.345	1
ZMYM3	Del_9q21.11	0.345	1
5p-Amp	Del_6q27	0.345	1
17p-Del	Amp_10p15.1	0.345	1
Amp_15q26.3	Del_1p22.1	0.345	1
GPS2	20p-Amp	0.346	1
AKD1	Del_11p15.5	0.346	1
GPRIN2	20p-Amp	0.346	1
CASZ1	Del_6p25.3	0.346	1
DLG1	Del_6p25.3	0.346	1
DOCK11	Del_6q15	0.346	1
FGFR2	20p-Amp	0.346	1
Amp_10p15.1	Amp_11q13.3	0.346	1
FBXW7	15q-Del	0.347	1
FBXW7	9q-Del	0.347	1
RUNX1	TP53	0.347	1
BCORL1	15q-Del	0.347	1
14q-Del	Amp_15q26.3	0.347	1
Amp_1q44	Del_20p13	0.347	1
Amp_10q22.3	Del_6q15	0.347	1
CDKN1B	9p-Del	0.348	1
CDKN1B	Del_10q26.3	0.348	1
GATA3	TBL1XR1	0.348	1
PIWIL1	22q-Del	0.348	1
PTPN22	9p-Del	0.348	1
SF3B1	Amp_15q26.3	0.348	1
TBL1XR1	9p-Del	0.348	1
ERBB3	22q-Del	0.348	1
HLA-C	20q-Amp	0.348	1
ATHL1	9p-Del	0.348	1
KCNN3	Del_13q14.2	0.348	1
KDM6A	8p-Del	0.348	1
CBFB	Amp_17q23.1	0.349	1
FOXA1	Amp_17q23.1	0.349	1
HLA-DRB5	Del_13q14.2	0.349	1
MAP2K4	9q-Del	0.349	1
MAP2K4	Del_20p13	0.349	1
MAP3K1	Del_4p16.3	0.349	1
OR2T35	Del_13q14.2	0.349	1
XBP1	Del_13q14.2	0.349	1
RIBC1	Del_13q14.2	0.349	1
ZBTB7C	Del_13q14.2	0.349	1
AARS	Del_8p23.2	0.35	1
GPS2	Del_5q21.3	0.35	1
ZFP36L1	Del_8p23.2	0.35	1
ATXN2	Amp_19q12	0.35	1
ATXN2	Del_21q11.2	0.35	1
FBXO17	22q-Del	0.35	1
GPRIN2	Del_5q21.3	0.35	1
ZNF41	Del_5q21.3	0.35	1
DOCK11	Del_1p22.1	0.35	1
MED23	14q-Del	0.35	1
MED23	Amp_19q12	0.35	1
MKL1	22q-Del	0.35	1
MUC6	Amp_19q12	0.35	1
RBMX	14q-Del	0.35	1
RBMX	17q-Del	0.35	1
ZMYM3	14q-Del	0.35	1
ZMYM3	Del_21q11.2	0.35	1
6q-Del	Amp_1q44	0.35	1
PIWIL1	5q-Del	0.351	1
RPGR	5q-Del	0.351	1
ANKRD12	5q-Del	0.351	1
ERBB3	5q-Del	0.351	1
MLL4	Del_6q15	0.351	1
SPEN	14q-Del	0.351	1
SPEN	Del_21q11.2	0.351	1
7q-Amp	14q-Del	0.351	1
7q-Amp	Del_21q11.2	0.351	1
Amp_1p22.3	Del_1p22.1	0.351	1
Amp_1p22.3	Del_3p21.31	0.351	1
GATA3	Del_20p13	0.352	1
ATXN2	Del_17p12	0.352	1
ATHL1	4p-Del	0.352	1
MUC6	Del_17p12	0.352	1
16p-Amp	17q-Amp	0.352	1
7q-Amp	Del_4p16.3	0.352	1
8p-Amp	Del_3p21.31	0.352	1
Amp_1q44	Amp_11p13	0.352	1
NCOR1	Amp_13q34	0.353	1
MORN1	Del_19p13.3	0.353	1
PCNXL2	Del_19q13.32	0.353	1
TPP2	Del_19p13.3	0.353	1
Amp_1q44	Del_5q21.3	0.353	1
CBFB	Amp_19p13.12	0.354	1
HIST1H3B	22q-Del	0.354	1
FXYD5	Amp_17q23.1	0.354	1
CDC42EP1	Amp_17q23.1	0.354	1
DOCK11	Amp_11q13.3	0.354	1
AARS	Del_4p16.3	0.355	1
AARS	Del_5q11.2	0.355	1
ARID1A	Del_2q37.3	0.355	1
CASP8	Del_2q37.3	0.355	1
MYB	Del_2q37.3	0.355	1
PIWIL1	Del_16q24.3	0.355	1
RPGR	Del_16q24.3	0.355	1
TAF1L	Del_16q24.3	0.355	1
VCPIP1	Del_4p16.3	0.355	1
VCPIP1	Del_5q11.2	0.355	1
FRMPD2	Del_2q37.3	0.355	1
NF1	Del_2q37.3	0.355	1
PCNXL2	Del_1p36.13	0.355	1
TGS1	Del_2q37.3	0.355	1
16q-Del	Amp_19p13.12	0.355	1
ACTL6B	18p-Del	0.356	1
CTCF	Amp_17q23.1	0.356	1
TBL1XR1	18p-Del	0.356	1
WSCD2	Del_12p13.1	0.356	1
ATXN2	Del_7q36.1	0.356	1
ATHL1	18p-Del	0.356	1
MED23	Amp_12q15	0.356	1
RBMX	Amp_12q15	0.356	1
RBMX	Del_7q36.1	0.356	1
SPEN	Amp_11q13.3	0.356	1
8q-Amp	Del_4p16.3	0.356	1
Amp_19q13.42	Del_13q14.2	0.356	1
FOXA1	Del_13q14.2	0.357	1
MAP2K4	Del_10q23.31	0.357	1
HRNR	Amp_1p22.3	0.357	1
7p-Amp	Del_11p15.5	0.357	1
Amp_8p11.23	Del_6p25.3	0.357	1
AQP12A	Del_6q27	0.358	1
FBXW7	Del_11q23.3	0.358	1
HIST1H2BC	Del_6q27	0.358	1
KRAS	Del_6q27	0.358	1
RUNX1	Del_1p36.13	0.358	1
OR6C76	Del_6q27	0.358	1
BCORL1	Del_11q23.3	0.358	1
CCDC82	Del_6q27	0.358	1
CEP57	Del_6q27	0.358	1
DLG1	8q-Amp	0.358	1
RHOA	Del_6q27	0.358	1
TARBP2	Del_6q27	0.358	1
1p-Del	Amp_15q26.3	0.358	1
Amp_1q44	Del_5q11.2	0.358	1
AARS	Del_1p22.1	0.359	1
ARID1A	13q-Del	0.359	1
CDH1	NFE2L3	0.359	1
CDH1	EIF4A2	0.359	1
CDH1	KCNN3	0.359	1
GPS2	Amp_6p23	0.359	1
NCOR1	20q-Amp	0.359	1
NCOR1	Amp_11q14.1	0.359	1
SF3B1	Del_18q23	0.359	1
HLA-C	Del_1p22.1	0.359	1
MYH9	Del_18q23	0.359	1
NFE2L3	Del_1p22.1	0.359	1
MUC6	Amp_8p11.23	0.359	1
PCNXL2	Del_17p12	0.359	1
RBMX	Amp_8p11.23	0.359	1
ZMYM3	Amp_8p11.23	0.359	1
17q-Amp	Amp_11q14.1	0.359	1
1q-Amp	Del_9q34.2	0.359	1
7p-Amp	6q-Del	0.359	1
7p-Amp	Del_21q11.2	0.359	1
7q-Amp	Del_1p22.1	0.359	1
ACTL6B	18q-Del	0.36	1
ASB10	Del_11p15.5	0.36	1
ASB10	Del_14q24.1	0.36	1
CDH1	MAP3K1	0.36	1
HIST1H3B	Amp_17q23.1	0.36	1
MAP3K1	Del_1p22.1	0.36	1
PTEN	Amp_1q44	0.36	1
TBL1XR1	18q-Del	0.36	1
GRHL2	Del_11p15.5	0.36	1
MORN1	Del_11p15.5	0.36	1
MORN1	Del_14q24.1	0.36	1
ATHL1	8p-Amp	0.36	1
ATHL1	18q-Del	0.36	1
C15orf39	Del_11p15.5	0.36	1
FRMPD2	11p-Del	0.36	1
FRMPD2	Del_9q34.2	0.36	1
RBMX	Del_9p21.3	0.36	1
SPEN	Del_7q36.1	0.36	1
TGS1	11p-Del	0.36	1
TPP2	Del_14q24.1	0.36	1
USP36	Del_11p15.5	0.36	1
5p-Amp	18p-Del	0.36	1
7q-Amp	Del_7q36.1	0.36	1
8p-Amp	1q-Del	0.36	1
18p-Del	Amp_11p13	0.36	1
RUNX1	Del_4q35.1	0.361	1
PAX2	Amp_8p11.23	0.361	1
PCNXL2	Amp_20q13.2	0.361	1
RHBG	Amp_8p11.23	0.361	1
ZBTB7C	Amp_8p11.23	0.361	1
Amp_1q44	Del_3p21.31	0.361	1
RB1	20q-Amp	0.362	1
RB1	Amp_11q14.1	0.362	1
CDKN1B	Amp_8p11.21	0.363	1
PTPN22	Amp_1q21.3	0.363	1
TBX3	Del_6p25.3	0.363	1
ANGPT4	Amp_1q21.3	0.363	1
Amp_1q21.3	Del_10q26.3	0.363	1
AQP12A	PIK3CA	0.364	1
CTCF	Amp_6q21	0.364	1
CTCF	Amp_11p13	0.364	1
MAP2K4	9p-Del	0.364	1
MAP3K1	Amp_3p25.1	0.364	1
PIK3CA	MLC1	0.364	1
PIK3CA	CXCR3	0.364	1
PIWIL1	Amp_11p13	0.364	1
PTPN22	6q-Del	0.364	1
RPGR	5p-Amp	0.364	1
RPGR	Amp_6q21	0.364	1
ANKRD12	Amp_6q21	0.364	1
ANKRD12	Amp_11p13	0.364	1
ERBB3	5p-Amp	0.364	1
ERBB3	Amp_6q21	0.364	1
PRICKLE3	6q-Del	0.364	1
ANGPT4	6q-Del	0.364	1
TNRC6B	Amp_19q13.42	0.364	1
MLL3	6q-Del	0.365	1
HRNR	Del_22q13.32	0.365	1
CASP8	Amp_17q12	0.366	1
MYB	Amp_17q12	0.366	1
PTEN	Del_19p13.3	0.366	1
TP53	Amp_8p11.23	0.366	1
FHOD3	Amp_17q12	0.366	1
ZNF687	Del_11q23.3	0.366	1
ERBB2	Amp_1p22.3	0.367	1
ZFP36L1	Amp_3q26.32	0.367	1
CASZ1	4q-Del	0.367	1
DOCK11	Amp_1p22.3	0.367	1
FOXA1	Del_5q21.3	0.368	1
PIK3CA	1p-Del	0.368	1
PIK3CA	Amp_14q21.1	0.368	1
RPGR	Del_19p13.3	0.368	1
ATXN2	11q-Del	0.368	1
MED23	11q-Del	0.368	1
MUC6	11q-Del	0.368	1
Amp_10p15.1	Del_9p21.3	0.368	1
HIST1H2BC	Del_1p36.13	0.369	1
KRAS	Del_1p36.13	0.369	1
HRNR	Amp_17q12	0.369	1
OR6C76	Del_1p36.13	0.369	1
CABYR	Del_1p36.13	0.369	1
DOCK11	Del_6q27	0.369	1
NF1	Del_19p13.3	0.369	1
PCNXL2	4p-Del	0.369	1
TARBP2	Del_1p36.13	0.369	1
TCP11	Del_1p36.13	0.369	1
ACTL6B	Amp_20q13.2	0.37	1
ARID1A	Del_6q15	0.37	1
MAP2K4	Amp_8q24.21	0.37	1
WSCD2	Del_6q27	0.37	1
MLL4	Del_6q27	0.37	1
5p-Amp	18q-Del	0.37	1
VCPIP1	Amp_1p22.3	0.371	1
1q-Amp	Amp_4q13.3	0.371	1
22q-Del	Amp_4q13.3	0.371	1
CBFB	Amp_10q22.3	0.372	1
CDKN1B	TP53	0.372	1
ERBB2	Del_19q13.32	0.372	1
MAP3K1	DLG1	0.372	1
TP53	COL6A5	0.372	1
WSCD2	Amp_12p13.33	0.372	1
WSCD2	Del_9q21.11	0.372	1
DLG1	Amp_12p13.33	0.372	1
DOCK11	Del_19q13.32	0.372	1
MED23	1q-Amp	0.372	1
MLL4	Amp_12p13.33	0.372	1
RBMX	1q-Amp	0.372	1
APC	5q-Del	0.373	1
CDKN1B	8p-Del	0.373	1
ERBB2	Amp_10p15.1	0.373	1
GATA3	Del_1p36.13	0.373	1
RB1	13q-Del	0.373	1
SF3B1	5q-Del	0.373	1
CCNL2	Del_11q23.3	0.373	1
DNAH12	5q-Del	0.373	1
MYH9	5q-Del	0.373	1
OR4D10	Del_18q23	0.373	1
WDR52	5q-Del	0.373	1
ANGPT4	8p-Del	0.373	1
ANKRD20A4	Del_11q23.3	0.373	1
KDM6A	5q-Del	0.373	1
MED23	15q-Del	0.373	1
MED23	9q-Del	0.373	1
MR1	Del_11q23.3	0.373	1
NF1	Amp_20q13.2	0.373	1
RBMX	Del_20p13	0.373	1
SDC1	Del_11q23.3	0.373	1
SPEN	Amp_3q26.32	0.373	1
TFE3	Del_18q23	0.373	1
ZMYM3	9q-Del	0.373	1
ZMYM3	Del_20p13	0.373	1
ZNF687	Del_16q24.3	0.373	1
17q-Amp	11p-Del	0.373	1
1q-Del	8p-Del	0.373	1
PIK3CA	RB1	0.374	1
7p-Amp	Del_17p12	0.374	1
AARS	Amp_10p15.1	0.375	1
CASP8	Del_6p25.3	0.375	1
MYB	Del_6p25.3	0.375	1
NCOR1	Amp_14q21.1	0.375	1
NCOR1	Del_4p16.3	0.375	1
PIWIL1	TP53	0.375	1
TP53	ANKRD12	0.375	1
FRMPD2	Del_6p25.3	0.375	1
ZNF687	16q-Del	0.375	1
16p-Amp	5q-Del	0.375	1
17q-Amp	Del_5q11.2	0.375	1
OR4D10	Del_17q21.31	0.376	1
Amp_19q12	Del_1p22.1	0.376	1
ARID1A	PTEN	0.377	1
GATA3	Del_18q23	0.377	1
CCNL2	Amp_8q24.21	0.377	1
GYG2	Del_4q35.1	0.377	1
MORN1	Del_15q13.1	0.377	1
MYH9	Del_9p23	0.377	1
ANKRD20A4	Amp_8q24.21	0.377	1
USP36	Del_15q13.1	0.377	1
8q-Amp	14q-Del	0.377	1
Amp_6q21	Del_1p36.13	0.377	1
CTCF	Amp_13q34	0.378	1
PIK3CA	17p-Del	0.378	1
PIWIL1	Del_11p15.5	0.378	1
TAF1L	Amp_13q34	0.378	1
TAF1L	Del_11p15.5	0.378	1
TBX3	Del_12p13.1	0.378	1
WSCD2	14q-Del	0.378	1
WSCD2	Del_21q11.2	0.378	1
ANKRD12	Del_11p15.5	0.378	1
ERBB3	Del_14q24.1	0.378	1
CASZ1	17q-Del	0.378	1
DLG1	17q-Del	0.378	1
DLG1	Del_21q11.2	0.378	1
MLL4	Amp_19q12	0.378	1
NF1	8p-Del	0.378	1
TNRC6B	Amp_13q34	0.378	1
5q-Del	Amp_20q13.2	0.378	1
CDH1	RB1	0.379	1
FBXW7	Del_22q13.32	0.379	1
KRAS	Del_3p21.31	0.38	1
KRAS	Del_9p21.3	0.38	1
MAP3K1	13q-Del	0.38	1
PTEN	Del_11p15.5	0.38	1
PTEN	Del_14q24.1	0.38	1
OR6C76	Del_9p21.3	0.38	1
DOCK11	7p-Amp	0.38	1
RHOA	Del_9p21.3	0.38	1
TARBP2	Del_3p21.31	0.38	1
TARBP2	Del_9p21.3	0.38	1
9p-Del	Amp_1q44	0.38	1
ARID1A	Del_11p15.5	0.381	1
ARID1A	Del_14q24.1	0.381	1
TBL1XR1	20p-Amp	0.381	1
ANKRD12	Amp_8q24.21	0.381	1
PRICKLE3	Del_17p12	0.381	1
MR1	16q-Del	0.381	1
16p-Amp	Del_9p23	0.381	1
Amp_3q26.32	Del_9q21.11	0.381	1
FBXW7	Amp_8p11.21	0.382	1
FOXA1	NCOR1	0.382	1
FOXA1	Amp_4q13.3	0.382	1
MAP3K1	RUNX1	0.382	1
RB1	Del_6q15	0.382	1
RUNX1	Amp_12p13.33	0.382	1
ABCA8	Amp_8p11.21	0.382	1
UBC	Amp_8q24.21	0.382	1
AARS	Del_10q23.31	0.383	1
CTCF	8q-Amp	0.383	1
MAP2K4	RUNX1	0.383	1
RAB42	Amp_11q13.3	0.383	1
TP53	Del_7q36.1	0.383	1
WSCD2	Amp_12q15	0.383	1
ANKRD12	8q-Amp	0.383	1
DST	20p-Amp	0.383	1
MORN1	Del_16q24.3	0.383	1
OR2T35	Amp_11q13.3	0.383	1
C15orf39	Del_16q24.3	0.383	1
CASZ1	Del_7q36.1	0.383	1
EIF4A2	Del_10q23.31	0.383	1
MLL4	Amp_12q15	0.383	1
20p-Amp	Del_1p22.1	0.383	1
KRAS	11q-Del	0.385	1
MAP2K4	Amp_15q26.3	0.385	1
MAP3K1	Del_14q24.1	0.385	1
OR6C76	11q-Del	0.385	1
CABYR	11q-Del	0.385	1
CEP57	11q-Del	0.385	1
CXCR3	11q-Del	0.385	1
PCNXL2	11q-Del	0.385	1
RHOA	11q-Del	0.385	1
TARBP2	11q-Del	0.385	1
TCP11	11q-Del	0.385	1
5p-Amp	Del_17p12	0.385	1
7q-Amp	Del_20p13	0.385	1
Amp_1q44	Amp_17q12	0.385	1
CASP8	Del_12p13.1	0.386	1
CDKN1B	Del_5q21.3	0.386	1
MYB	Del_12p13.1	0.386	1
NCOR1	Amp_11q13.3	0.386	1
PTEN	Del_3p21.31	0.386	1
PTPN22	Del_5q21.3	0.386	1
RPGR	Del_17p12	0.386	1
TBL1XR1	Del_5q21.3	0.386	1
WSCD2	Del_1p36.13	0.386	1
ATXN7L1	Del_9p23	0.386	1
CCNL2	Del_9p23	0.386	1
FHOD3	Del_12p13.1	0.386	1
HRNR	9p-Del	0.386	1
ANGPT4	Del_5q21.3	0.386	1
CASZ1	Del_1p36.13	0.386	1
DLG1	Del_1p36.13	0.386	1
FRMPD2	Del_12p13.1	0.386	1
17q-Amp	Del_12q23.1	0.386	1
Amp_4q13.3	Del_12q24.31	0.386	1
Amp_4q13.3	Del_16q24.3	0.386	1
APC	5p-Amp	0.387	1
APC	Amp_6q21	0.387	1
GATA3	HLA-C	0.387	1
SF3B1	Amp_6q21	0.387	1
VCPIP1	9p-Del	0.387	1
DNAH12	Amp_6q21	0.387	1
MYH9	5p-Amp	0.387	1
MYH9	Amp_11p13	0.387	1
MYH9	Amp_19q13.42	0.387	1
NFE2L3	9p-Del	0.387	1
WDR52	Amp_11p13	0.387	1
WDR52	Amp_19q13.42	0.387	1
EIF4A2	9p-Del	0.387	1
KDM6A	5p-Amp	0.387	1
KDM6A	Amp_19q13.42	0.387	1
SPEN	Amp_10p15.1	0.387	1
ASB10	16p-Amp	0.388	1
ERBB2	Amp_3p25.1	0.388	1
GPS2	Del_2q37.3	0.388	1
HIST1H3B	Del_2q37.3	0.388	1
MAP2K4	Amp_1q44	0.388	1
PTEN	Amp_6p23	0.388	1
TCP10	16p-Amp	0.388	1
GPRIN2	Del_2q37.3	0.388	1
MORN1	16p-Amp	0.388	1
PPEF1	Del_2q37.3	0.388	1
IRS4	Del_2q37.3	0.388	1
SPEN	8q-Amp	0.388	1
MAP3K1	1q-Amp	0.389	1
MORN1	8q-Amp	0.389	1
SLC35B2	8q-Amp	0.389	1
16p-Amp	Del_6p25.3	0.389	1
ERBB2	GATA3	0.39	1
RUNX1	Amp_19q12	0.39	1
RUNX1	Del_21q11.2	0.39	1
AARS	4p-Del	0.391	1
VCPIP1	4p-Del	0.391	1
NFE2L3	4p-Del	0.391	1
KCNN3	4p-Del	0.391	1
KDM6A	22q-Del	0.391	1
NF1	16q-Del	0.391	1
ASB10	20q-Amp	0.392	1
ASB10	Amp_11q14.1	0.392	1
TCP10	Amp_11q14.1	0.392	1
AKD1	Amp_11q14.1	0.392	1
DLX6	Del_16q24.3	0.392	1
FBXO17	Del_16q24.3	0.392	1
FXYD5	Amp_17q12	0.392	1
GRHL2	20q-Amp	0.392	1
MORN1	20q-Amp	0.392	1
SHISA4	Amp_17q12	0.392	1
SHISA4	Del_16q24.3	0.392	1
C15orf39	20q-Amp	0.392	1
C15orf39	Amp_11q14.1	0.392	1
CDC42EP1	Amp_17q12	0.392	1
DLG1	Del_13q14.2	0.392	1
NBPF9	Amp_17q12	0.392	1
PSIP1	Amp_11q14.1	0.392	1
Amp_8p11.23	Del_15q13.1	0.392	1
CTCF	Amp_14q21.1	0.393	1
ERBB2	Amp_8p11.21	0.393	1
GPS2	Del_9q34.2	0.393	1
PTEN	Amp_19q13.42	0.393	1
RPGR	1p-Del	0.393	1
THEM5	11p-Del	0.393	1
ANKRD12	1p-Del	0.393	1
GPRIN2	11p-Del	0.393	1
GPRIN2	Del_9q34.2	0.393	1
PPEF1	11p-Del	0.393	1
DOCK11	Amp_8p11.21	0.393	1
FRMPD2	Amp_1q44	0.393	1
IRS4	11p-Del	0.393	1
IRS4	Del_9q34.2	0.393	1
TNRC6B	1p-Del	0.393	1
TNRC6B	Amp_14q21.1	0.393	1
ZNF687	Del_9q34.2	0.393	1
4q-Del	Amp_8p11.21	0.393	1
FBXW7	8p-Del	0.394	1
PIK3CA	VCPIP1	0.394	1
PIK3CA	KCNN3	0.394	1
ABCA8	8p-Del	0.394	1
1q-Amp	Amp_3q26.32	0.394	1
20p-Amp	17p-Del	0.394	1
18p-Del	Amp_6p23	0.394	1
AARS	18p-Del	0.395	1
CDKN1B	Amp_6p23	0.395	1
FBXW7	Del_18q23	0.395	1
MLL3	Del_13q14.2	0.395	1
TBL1XR1	Amp_6p23	0.395	1
HLA-C	18p-Del	0.395	1
NFE2L3	18p-Del	0.395	1
CASP8	4q-Del	0.396	1
ERBB2	4p-Del	0.396	1
MYB	4q-Del	0.396	1
MYB	Del_6q15	0.396	1
FHOD3	Del_6q15	0.396	1
UBC	4q-Del	0.396	1
FRMPD2	4q-Del	0.396	1
9p-Del	Amp_8p11.21	0.396	1
FBXW7	5q-Del	0.397	1
MAP3K1	4q-Del	0.397	1
MAP3K1	Amp_19p13.12	0.397	1
ABCA8	5q-Del	0.397	1
ATXN2	Amp_15q26.3	0.397	1
BCORL1	5q-Del	0.397	1
MED23	Amp_15q26.3	0.397	1
NF1	Del_6q27	0.397	1
8p-Amp	Del_6p25.3	0.397	1
Amp_1q44	Del_11p15.5	0.397	1
ACTL6B	1q-Amp	0.398	1
ANGPT4	1q-Amp	0.398	1
Amp_8p11.23	Del_5q21.3	0.398	1
FAM20C	Del_22q13.32	0.399	1
FAM86B1	Del_4p16.3	0.399	1
NCOR1	Amp_3q26.32	0.399	1
RAB42	Del_22q13.32	0.399	1
RB1	7p-Amp	0.399	1
TCP10	Del_4p16.3	0.399	1
VCPIP1	8p-Amp	0.399	1
CCL13	Del_22q13.32	0.399	1
GRHL2	Del_4p16.3	0.399	1
GRHL2	Del_5q11.2	0.399	1
GYG2	Del_4p16.3	0.399	1
HLA-C	8p-Amp	0.399	1
HLA-C	18q-Del	0.399	1
MORN1	Del_5q11.2	0.399	1
NFE2L3	18q-Del	0.399	1
XBP1	Del_22q13.32	0.399	1
EIF4A2	8p-Amp	0.399	1
KCNN3	8p-Amp	0.399	1
PSIP1	Del_5q11.2	0.399	1
RIBC1	Del_22q13.32	0.399	1
SLC35B2	Del_5q11.2	0.399	1
TPP2	Del_4p16.3	0.399	1
TTPAL	Del_22q13.32	0.399	1
USP36	Del_4p16.3	0.399	1
ZBTB7C	Del_22q13.32	0.399	1
5p-Amp	Amp_8p11.23	0.399	1
7p-Amp	Del_15q13.1	0.399	1
CTCF	Del_12q23.1	0.4	1
RPGR	Del_12q24.31	0.4	1
TAF1L	Del_12q23.1	0.4	1
TAF1L	Del_12q24.31	0.4	1
WSCD2	15q-Del	0.4	1
WSCD2	9q-Del	0.4	1
WSCD2	Del_20p13	0.4	1
CASZ1	15q-Del	0.4	1
CASZ1	Del_20p13	0.4	1
DLG1	15q-Del	0.4	1
MLL4	15q-Del	0.4	1
16p-Amp	Del_20p13	0.4	1
Amp_14q21.1	Del_10q23.31	0.4	1
APC	Amp_13q34	0.401	1
PIK3CA	8p-Del	0.401	1
RUNX1	Del_4p16.3	0.401	1
RUNX1	Del_5q11.2	0.401	1
MYH9	Amp_13q34	0.401	1
OXCT2	Amp_8p11.21	0.401	1
RIBC1	Amp_8p11.21	0.401	1
ZBTB7C	Amp_8p11.21	0.401	1
ERBB2	18p-Del	0.402	1
MAP3K1	FHOD3	0.402	1
MAP3K1	FRMPD2	0.402	1
MYB	Amp_12p13.33	0.402	1
MYB	Del_9q21.11	0.402	1
PTHLH	Del_19p13.3	0.402	1
SF3B1	Del_19p13.3	0.402	1
WSCD2	Del_3p21.31	0.402	1
WSCD2	Del_9p21.3	0.402	1
CCNL2	Del_19p13.3	0.402	1
FHOD3	Amp_12p13.33	0.402	1
OR4D10	Del_19p13.3	0.402	1
CASZ1	Del_3p21.31	0.402	1
CASZ1	Del_9p21.3	0.402	1
DLG1	Del_9p21.3	0.402	1
FRMPD2	Del_9q21.11	0.402	1
MR1	Del_19p13.3	0.402	1
TFE3	Del_19p13.3	0.402	1
TGS1	Amp_12p13.33	0.402	1
7q-Amp	Del_10q23.31	0.402	1
Amp_10q22.3	Del_12p13.1	0.402	1
C1QTNF5	Amp_1q21.3	0.403	1
CDH1	GYG2	0.403	1
CDH1	C15orf39	0.403	1
CDH1	USP36	0.403	1
CTCF	Del_4q35.1	0.403	1
PTEN	17p-Del	0.403	1
TAF1L	Del_15q13.1	0.403	1
TCP10	Del_1p22.1	0.403	1
AKD1	Del_4p16.3	0.403	1
GRHL2	Del_1p22.1	0.403	1
GYG2	Del_1p22.1	0.403	1
MORN1	Del_1p22.1	0.403	1
OR4D10	Amp_1q21.3	0.403	1
C15orf39	Del_1p22.1	0.403	1
EIF4A2	6q-Del	0.403	1
TNRC6B	Del_4q35.1	0.403	1
USP36	Del_1p22.1	0.403	1
5p-Amp	Amp_13q34	0.403	1
7p-Amp	Amp_19p13.12	0.404	1
NCOR1	Del_18q23	0.405	1
SPEN	Amp_8p11.21	0.405	1
ERBB2	Amp_19p13.12	0.406	1
FAM20C	Amp_20q13.2	0.406	1
HLA-DRB5	Amp_20q13.2	0.406	1
RAB42	Amp_20q13.2	0.406	1
RB1	Del_6q27	0.406	1
CCL13	Amp_20q13.2	0.406	1
PAX2	Amp_20q13.2	0.406	1
PCNXL2	Amp_10q22.3	0.406	1
16q-Del	Del_10q26.3	0.406	1
Amp_8p11.23	Del_12p13.1	0.406	1
CASP8	14q-Del	0.407	1
CASP8	17q-Del	0.407	1
CASP8	Amp_19q12	0.407	1
CASP8	Del_21q11.2	0.407	1
HIST1H3B	Del_6p25.3	0.407	1
MYB	17q-Del	0.407	1
MYB	Amp_19q12	0.407	1
MYB	Del_21q11.2	0.407	1
RB1	Amp_3p25.1	0.407	1
RUNX1	7q-Amp	0.407	1
FBXO17	13q-Del	0.407	1
FHOD3	Amp_19q12	0.407	1
FHOD3	Del_21q11.2	0.407	1
FXYD5	13q-Del	0.407	1
PPEF1	Del_6p25.3	0.407	1
UBC	14q-Del	0.407	1
UBC	Amp_19q12	0.407	1
AKT2	13q-Del	0.407	1
FRMPD2	14q-Del	0.407	1
FRMPD2	17q-Del	0.407	1
IRS4	Del_6p25.3	0.407	1
MKL1	13q-Del	0.407	1
TGS1	Amp_19q12	0.407	1
ZNF687	Del_6p25.3	0.407	1
18q-Del	Amp_6p23	0.407	1
Amp_1q44	Del_17p12	0.407	1
Amp_6p23	Del_19q13.32	0.407	1
ERBB2	18q-Del	0.408	1
HLA-DRB5	8p-Del	0.408	1
RAB42	8p-Del	0.408	1
RPGR	1q-Amp	0.408	1
RUNX1	Del_1p22.1	0.408	1
TBX3	Del_17p12	0.408	1
PRICKLE3	22q-Del	0.408	1
DOCK11	8p-Amp	0.408	1
DOCK11	18q-Del	0.408	1
PSIP1	17p-Del	0.408	1
TPP2	17p-Del	0.408	1
TTPAL	8p-Del	0.408	1
ZBTB7C	8p-Del	0.408	1
11q-Del	Amp_12p13.33	0.408	1
Amp_4q13.3	Del_6q27	0.408	1
SMAD2	Del_14q24.1	0.409	1
SMAD4	Del_11p15.5	0.409	1
SMAD4	Del_14q24.1	0.409	1
TP53	WSCD2	0.409	1
TP53	MLL4	0.409	1
ZFP36L2	Del_14q24.1	0.409	1
AKD1	Del_1p22.1	0.409	1
ATXN7L1	Del_14q24.1	0.409	1
DST	5p-Amp	0.409	1
OR4D10	Del_11p15.5	0.409	1
OR4D10	Del_14q24.1	0.409	1
ANKRD20A4	Del_14q24.1	0.409	1
MR1	Del_11p15.5	0.409	1
MR1	Del_14q24.1	0.409	1
TFE3	Del_11p15.5	0.409	1
TFE3	Del_14q24.1	0.409	1
Amp_1p22.3	Del_21q11.2	0.409	1
Amp_1q44	Amp_4q13.3	0.409	1
ASB10	Amp_3q26.32	0.41	1
GATA3	1p-Del	0.41	1
TBX3	Del_21q11.2	0.41	1
WSCD2	11q-Del	0.41	1
GRHL2	Amp_3q26.32	0.41	1
GYG2	Amp_3q26.32	0.41	1
MORN1	Amp_3q26.32	0.41	1
PSIP1	Amp_3q26.32	0.41	1
TPP2	Amp_3q26.32	0.41	1
Amp_10q22.3	Del_1p36.13	0.41	1
FBXW7	Amp_19q13.42	0.411	1
PIK3R1	Amp_6q21	0.411	1
PIK3R1	Amp_11p13	0.411	1
AKD1	Del_19q13.32	0.411	1
HRNR	Del_17q21.31	0.411	1
BCORL1	5p-Amp	0.411	1
BCORL1	Amp_19q13.42	0.411	1
11p-Del	Amp_3q26.32	0.411	1
Amp_19q13.42	Del_3p21.31	0.411	1
APC	Del_14q24.1	0.412	1
SF3B1	Del_11p15.5	0.412	1
TP53	CCDC82	0.412	1
TP53	RHOA	0.412	1
DNAH12	Del_11p15.5	0.412	1
FBXO17	Del_6q15	0.412	1
FXYD5	Del_6q15	0.412	1
MYH9	Del_14q24.1	0.412	1
SHISA4	Del_6q15	0.412	1
WDR52	Del_14q24.1	0.412	1
MKL1	Del_6q15	0.412	1
5p-Amp	Del_17q21.31	0.412	1
CASP8	Amp_12q15	0.413	1
CASP8	Del_7q36.1	0.413	1
MYB	Amp_12q15	0.413	1
MYB	Del_7q36.1	0.413	1
PIK3CA	HRNR	0.413	1
TBX3	20q-Amp	0.413	1
TP53	7q-Amp	0.413	1
WSCD2	Amp_8p11.23	0.413	1
FHOD3	Del_7q36.1	0.413	1
UBC	Del_7q36.1	0.413	1
CASZ1	Amp_8p11.23	0.413	1
NF1	Del_15q13.1	0.413	1
PCNXL2	20p-Amp	0.413	1
TGS1	Del_7q36.1	0.413	1
FAM86B1	Amp_1p22.3	0.414	1
PIK3R1	Del_9p23	0.414	1
GRHL2	Amp_1p22.3	0.414	1
MORN1	Amp_1p22.3	0.414	1
BCORL1	Del_9p23	0.414	1
PSIP1	Amp_1p22.3	0.414	1
SLC35B2	Amp_1p22.3	0.414	1
APC	Amp_14q21.1	0.415	1
CDKN1B	Amp_17q23.1	0.415	1
MLL3	TP53	0.415	1
SF3B1	1p-Del	0.415	1
SF3B1	Amp_14q21.1	0.415	1
DNAH12	Amp_14q21.1	0.415	1
MYH9	1p-Del	0.415	1
MYH9	Amp_14q21.1	0.415	1
WDR52	1p-Del	0.415	1
WDR52	Amp_14q21.1	0.415	1
DOCK11	6q-Del	0.415	1
FRMPD2	Del_6q27	0.415	1
NF1	4q-Del	0.415	1
PCNXL2	Amp_4q13.3	0.415	1
TGS1	Del_6q27	0.415	1
Amp_6q21	Amp_8p11.21	0.415	1
Amp_14q21.1	Del_14q24.1	0.415	1
FAM86B1	Del_13q14.2	0.416	1
GPS2	Amp_17q12	0.416	1
HIST1H3B	Amp_17q12	0.416	1
NCOR1	Amp_10p15.1	0.416	1
THEM5	Amp_17q12	0.416	1
MORN1	Del_13q14.2	0.416	1
C15orf39	Del_13q14.2	0.416	1
PSIP1	Del_13q14.2	0.416	1
SPEN	Amp_20q13.2	0.416	1
TPP2	Del_13q14.2	0.416	1
ZNF687	Amp_17q12	0.416	1
8p-Amp	4p-Del	0.416	1
17q-Del	Amp_6p23	0.416	1
CASP8	8q-Amp	0.417	1
TP53	Del_1p36.13	0.417	1
FHOD3	8q-Amp	0.417	1
4p-Del	Amp_8p11.21	0.417	1
GPS2	Del_12p13.1	0.418	1
HIST1H3B	Del_12p13.1	0.418	1
TBX3	Del_7q36.1	0.418	1
THEM5	Del_12p13.1	0.418	1
WSCD2	Del_17p12	0.418	1
GPRIN2	Del_12p13.1	0.418	1
GRHL2	Amp_10p15.1	0.418	1
MORN1	Amp_10p15.1	0.418	1
IRS4	Del_12p13.1	0.418	1
MLL4	Del_17p12	0.418	1
PSIP1	Amp_10p15.1	0.418	1
ZNF687	Del_12p13.1	0.418	1
NCOR1	Del_12p13.1	0.419	1
MLC1	Del_17p12	0.419	1
CCDC82	Del_17p12	0.419	1
ZMYM3	Del_11q23.3	0.419	1
16p-Amp	Del_15q13.1	0.419	1
Amp_19q12	Del_11q23.3	0.419	1
TBX3	7q-Amp	0.42	1
ZFP36L1	20p-Amp	0.42	1
HLA-C	20p-Amp	0.42	1
DOCK11	11q-Del	0.42	1
1q-Amp	Amp_19q12	0.42	1
AARS	Del_22q13.32	0.421	1
PTEN	Amp_20q13.2	0.421	1
VCPIP1	Del_22q13.32	0.421	1
AKD1	Del_6q15	0.421	1
16p-Amp	Del_12p13.1	0.421	1
16q-Del	Amp_6q21	0.421	1
CBFB	PTEN	0.422	1
CTCF	Amp_1q21.3	0.422	1
RUNX1	Amp_3q26.32	0.422	1
ANKRD12	Amp_1q21.3	0.422	1
1q-Amp	Amp_8p11.21	0.422	1
8q-Amp	Del_9p21.3	0.422	1
4p-Del	Amp_8p11.23	0.422	1
ACTL6B	Del_2q37.3	0.423	1
APC	Del_12q23.1	0.423	1
APC	Del_12q24.31	0.423	1
ARID1A	Amp_12p13.33	0.423	1
CDKN1B	Del_2q37.3	0.423	1
FOXA1	Del_2q37.3	0.423	1
TBL1XR1	Del_2q37.3	0.423	1
DNAH12	Del_12q23.1	0.423	1
MYH9	Del_12q23.1	0.423	1
MYH9	Del_12q24.31	0.423	1
PRICKLE3	Del_2q37.3	0.423	1
WDR52	Del_12q23.1	0.423	1
WDR52	Del_12q24.31	0.423	1
KDM6A	Del_12q23.1	0.423	1
MED23	5q-Del	0.423	1
NF1	Amp_12p13.33	0.423	1
ZMYM3	5q-Del	0.423	1
Amp_8p11.23	Del_4p16.3	0.423	1
AARS	Amp_8p11.21	0.424	1
AARS	Del_5q21.3	0.424	1
ERBB2	Amp_10q22.3	0.424	1
MAP3K1	14q-Del	0.424	1
MAP3K1	Amp_19q12	0.424	1
MAP3K1	Del_21q11.2	0.424	1
RUNX1	Del_20p13	0.424	1
VCPIP1	Del_5q21.3	0.424	1
WSCD2	Amp_15q26.3	0.424	1
HLA-C	Amp_8p11.21	0.424	1
NFE2L3	Del_5q21.3	0.424	1
EIF4A2	Amp_8p11.21	0.424	1
APC	Del_16q24.3	0.425	1
CTCF	Amp_11q14.1	0.425	1
CTCF	Amp_17q12	0.425	1
EPDR1	Del_6q27	0.425	1
PIK3R1	Amp_13q34	0.425	1
PIWIL1	Amp_11q14.1	0.425	1
RB1	Amp_19p13.12	0.425	1
RPGR	Amp_17q12	0.425	1
TAF1L	Amp_11q14.1	0.425	1
FXYD5	Del_6q27	0.425	1
SHISA4	Del_6q27	0.425	1
AKT2	Del_6q27	0.425	1
MKL1	Del_6q27	0.425	1
NBPF9	Del_6q27	0.425	1
SPEN	17p-Del	0.425	1
TNRC6B	20q-Amp	0.425	1
TNRC6B	Amp_11q14.1	0.425	1
20q-Amp	16p-Del	0.425	1
Amp_1p22.3	Amp_12q15	0.425	1
ASB10	Del_10q23.31	0.426	1
MAP2K4	Amp_1q21.3	0.426	1
PIK3CA	PIK3R1	0.426	1
SMAD2	Del_4q35.1	0.426	1
TCP10	Del_10q23.31	0.426	1
ZFP36L2	Del_4q35.1	0.426	1
ZFP36L2	Del_15q13.1	0.426	1
ATXN7L1	Del_4q35.1	0.426	1
GRHL2	Del_10q23.31	0.426	1
MORN1	Del_10q23.31	0.426	1
OR4D10	Del_4q35.1	0.426	1
OR4D10	Del_15q13.1	0.426	1
ANKRD20A4	Del_15q13.1	0.426	1
MR1	Del_15q13.1	0.426	1
TFE3	Del_15q13.1	0.426	1
TPP2	Del_10q23.31	0.426	1
1q-Amp	11q-Del	0.426	1
MAP3K1	Del_10q23.31	0.427	1
AKD1	Del_7p22.3	0.427	1
Amp_10p15.1	Del_22q13.32	0.427	1
CDKN1B	11p-Del	0.428	1
CDKN1B	Del_9q34.2	0.428	1
GPS2	4q-Del	0.428	1
PTPN22	11p-Del	0.428	1
TBL1XR1	Del_9q34.2	0.428	1
GPRIN2	4q-Del	0.428	1
IRS4	4q-Del	0.428	1
SPEN	Del_17p12	0.428	1
ZNF687	4q-Del	0.428	1
7q-Amp	Del_17p12	0.428	1
RUNX1	Amp_1p22.3	0.429	1
ZMYM3	Del_22q13.32	0.429	1
16p-Amp	Amp_17q12	0.429	1
11q-Del	Amp_6q21	0.429	1
Del_1p22.1	Del_5q11.2	0.429	1
CASP8	15q-Del	0.43	1
CASP8	Del_20p13	0.43	1
CBFB	Amp_17q12	0.43	1
FAM86B1	GATA3	0.43	1
GATA3	TCP10	0.43	1
GATA3	GRHL2	0.43	1
GATA3	C15orf39	0.43	1
GATA3	PSIP1	0.43	1
KRAS	Del_18q23	0.43	1
MYB	15q-Del	0.43	1
MYB	9q-Del	0.43	1
MYB	Del_20p13	0.43	1
TCP10	9p-Del	0.43	1
GRHL2	Del_10q26.3	0.43	1
HLA-C	Amp_20q13.2	0.43	1
MORN1	9p-Del	0.43	1
MORN1	Del_10q26.3	0.43	1
UBC	Del_20p13	0.43	1
CABYR	Del_18q23	0.43	1
FRMPD2	15q-Del	0.43	1
FRMPD2	Del_20p13	0.43	1
PSIP1	9p-Del	0.43	1
TGS1	15q-Del	0.43	1
TPP2	Del_10q26.3	0.43	1
USP36	9p-Del	0.43	1
4p-Del	Amp_11q13.3	0.43	1
ARID1A	Amp_19q12	0.431	1
MLL3	8q-Amp	0.431	1
MLL3	Amp_3q26.32	0.431	1
PIK3CA	Amp_12q15	0.431	1
RB1	18p-Del	0.431	1
UBC	Del_1p36.13	0.431	1
1p-Del	Amp_19q13.42	0.431	1
AQP12A	1q-Amp	0.432	1
FAM20C	22q-Del	0.432	1
PIWIL1	Del_19q13.32	0.432	1
RAB42	22q-Del	0.432	1
CCL13	22q-Del	0.432	1
HRNR	Del_9p23	0.432	1
MLC1	1q-Amp	0.432	1
XBP1	22q-Del	0.432	1
CCDC82	1q-Amp	0.432	1
RHBG	22q-Del	0.432	1
RIBC1	22q-Del	0.432	1
SPEN	8p-Amp	0.432	1
TARBP2	1q-Amp	0.432	1
TNRC6B	Del_19q13.32	0.432	1
TTPAL	22q-Del	0.432	1
ZBTB7C	22q-Del	0.432	1
1q-Amp	Del_1p22.1	0.432	1
5p-Amp	17q-Del	0.432	1
AARS	8p-Del	0.433	1
AARS	Amp_6p23	0.433	1
ERBB2	17q-Amp	0.433	1
KRAS	Del_17q21.31	0.433	1
VCPIP1	Amp_6p23	0.433	1
ZFP36L1	Amp_6p23	0.433	1
ATXN2	Amp_8p11.21	0.433	1
GRHL2	Amp_8p11.23	0.433	1
GYG2	Amp_8p11.23	0.433	1
HLA-C	Amp_8q24.21	0.433	1
MLC1	Del_17q21.31	0.433	1
NFE2L3	Amp_6p23	0.433	1
C15orf39	Amp_8p11.23	0.433	1
DOCK11	Amp_4q13.3	0.433	1
EIF4A2	8p-Del	0.433	1
EIF4A2	Amp_6p23	0.433	1
EIF4A2	Amp_8q24.21	0.433	1
MED23	Amp_8p11.21	0.433	1
SLC35B2	Amp_8p11.23	0.433	1
TCP11	Del_17q21.31	0.433	1
TPP2	Amp_8p11.23	0.433	1
USP36	Amp_8p11.23	0.433	1
20q-Amp	Del_4q35.1	0.433	1
Amp_4q13.3	Del_10q23.31	0.433	1
ARID1A	7q-Amp	0.434	1
GPS2	Amp_12p13.33	0.434	1
GPS2	Del_9q21.11	0.434	1
HIST1H3B	MAP3K1	0.434	1
HIST1H3B	Amp_12p13.33	0.434	1
MAP3K1	GPRIN2	0.434	1
MAP3K1	ZNF41	0.434	1
MAP3K1	FGFR2	0.434	1
MAP3K1	IRS4	0.434	1
TBX3	Del_1p22.1	0.434	1
TCP10	4p-Del	0.434	1
THEM5	Amp_12p13.33	0.434	1
GPRIN2	Amp_12p13.33	0.434	1
GPRIN2	Del_9q21.11	0.434	1
GRHL2	4p-Del	0.434	1
GYG2	4p-Del	0.434	1
PPEF1	Amp_12p13.33	0.434	1
ZNF41	Amp_12p13.33	0.434	1
ZNF41	Del_9q21.11	0.434	1
FGFR2	Amp_12p13.33	0.434	1
IRS4	Amp_12p13.33	0.434	1
IRS4	Del_9q21.11	0.434	1
MUC6	Del_18q23	0.434	1
NF1	7q-Amp	0.434	1
RBMX	Del_18q23	0.434	1
TPP2	4p-Del	0.434	1
USP36	4p-Del	0.434	1
ZNF687	Del_9q21.11	0.434	1
15q-Del	Amp_17q12	0.434	1
17p-Del	Amp_19q12	0.434	1
9q-Del	Amp_17q12	0.434	1
Amp_8p11.23	Amp_10p15.1	0.434	1
Amp_17q12	Del_20p13	0.434	1
ARID1A	22q-Del	0.435	1
NCOR1	Del_9p23	0.435	1
CTCF	Del_4p16.3	0.436	1
CTCF	Del_5q11.2	0.436	1
HLA-DRB5	Amp_17q23.1	0.436	1
RAB42	Amp_17q23.1	0.436	1
RPGR	Del_5q11.2	0.436	1
TAF1L	Del_5q11.2	0.436	1
ANKRD12	Del_5q11.2	0.436	1
ATXN2	5p-Amp	0.436	1
ATXN2	Amp_11p13	0.436	1
CCL13	Amp_17q23.1	0.436	1
DNAH12	8q-Amp	0.436	1
FBXO17	Del_1p36.13	0.436	1
OR2T35	Amp_17q23.1	0.436	1
SHISA4	Del_1p36.13	0.436	1
MED23	5p-Amp	0.436	1
MED23	Amp_6q21	0.436	1
MED23	Amp_11p13	0.436	1
MED23	Amp_19q13.42	0.436	1
OXCT2	Amp_17q23.1	0.436	1
RBMX	Amp_19q13.42	0.436	1
TTPAL	Amp_17q23.1	0.436	1
ZNF362	Amp_17q23.1	0.436	1
APC	Del_15q13.1	0.437	1
C1QTNF5	16p-Amp	0.437	1
CBFB	Del_17p12	0.437	1
SF3B1	Del_4q35.1	0.437	1
SF3B1	Del_15q13.1	0.437	1
SMAD4	16p-Amp	0.437	1
ATXN7L1	16p-Amp	0.437	1
COL6A5	Del_6q15	0.437	1
MYH9	Del_15q13.1	0.437	1
SPRR2B	8q-Amp	0.437	1
WDR52	Del_4q35.1	0.437	1
WDR52	Del_15q13.1	0.437	1
KDM6A	Del_4q35.1	0.437	1
KDM6A	Del_15q13.1	0.437	1
RBMX	Amp_1q44	0.437	1
TFE3	16p-Amp	0.437	1
Amp_1q21.3	Del_2q37.3	0.437	1
Amp_1q44	Amp_8p11.21	0.437	1
ASB10	18p-Del	0.438	1
ERBB2	Del_8p23.2	0.438	1
FAM86B1	18p-Del	0.438	1
HIST1H3B	13q-Del	0.438	1
PIK3R1	22q-Del	0.438	1
PTPN22	Del_11q23.3	0.438	1
GPRIN2	13q-Del	0.438	1
GRHL2	18p-Del	0.438	1
ANGPT4	Del_11q23.3	0.438	1
C15orf39	18p-Del	0.438	1
CASZ1	1q-Amp	0.438	1
IRS4	13q-Del	0.438	1
TPP2	18p-Del	0.438	1
USP36	18p-Del	0.438	1
FBXW7	1p-Del	0.439	1
FBXW7	Amp_14q21.1	0.439	1
GPS2	14q-Del	0.439	1
GPS2	17q-Del	0.439	1
GPS2	Amp_19q12	0.439	1
HIST1H3B	17q-Del	0.439	1
HIST1H3B	Del_21q11.2	0.439	1
MAP3K1	9p-Del	0.439	1
PIK3R1	1p-Del	0.439	1
THEM5	14q-Del	0.439	1
THEM5	Del_21q11.2	0.439	1
GPRIN2	14q-Del	0.439	1
GPRIN2	Amp_19q12	0.439	1
ZNF41	Del_21q11.2	0.439	1
BCORL1	Amp_14q21.1	0.439	1
CDC42EP1	Del_8p23.2	0.439	1
FGFR2	14q-Del	0.439	1
FGFR2	Del_21q11.2	0.439	1
IRS4	14q-Del	0.439	1
IRS4	Del_21q11.2	0.439	1
MED23	Del_17q21.31	0.439	1
NF1	Del_7q36.1	0.439	1
RBMX	Del_17q21.31	0.439	1
TNRC6B	Del_8p23.2	0.439	1
ZNF687	14q-Del	0.439	1
16p-Del	Amp_1q44	0.439	1
CTCF	7p-Amp	0.44	1
PTHLH	20q-Amp	0.44	1
SMAD2	20q-Amp	0.44	1
SMAD4	Amp_11q14.1	0.44	1
ZFP36L2	20q-Amp	0.44	1
ZFP36L2	Amp_11q14.1	0.44	1
ANKRD12	7p-Amp	0.44	1
ERBB3	7p-Amp	0.44	1
OR4D10	20q-Amp	0.44	1
ANKRD20A4	20q-Amp	0.44	1
ANKRD20A4	Amp_11q14.1	0.44	1
DOCK11	20p-Amp	0.44	1
MR1	Amp_11q14.1	0.44	1
NF1	20q-Amp	0.44	1
TFE3	20q-Amp	0.44	1
CDH1	ERBB3	0.441	1
CTCF	Del_1p22.1	0.441	1
HLA-DRB5	Amp_8q24.21	0.441	1
PIWIL1	Del_1p22.1	0.441	1
RPGR	Del_1p22.1	0.441	1
TAF1L	Del_1p22.1	0.441	1
ANKRD12	Del_1p22.1	0.441	1
GPRIN2	Del_8p23.2	0.441	1
FGFR2	Del_8p23.2	0.441	1
FRMPD2	17p-Del	0.441	1
MED23	Del_8p23.2	0.441	1
OXCT2	Amp_8q24.21	0.441	1
RBMX	Del_8p23.2	0.441	1
RIBC1	Amp_8q24.21	0.441	1
TNRC6B	Del_1p22.1	0.441	1
ZMYM3	Amp_20q13.2	0.441	1
ZMYM3	Del_8p23.2	0.441	1
ZNF362	Amp_8q24.21	0.441	1
7q-Amp	Del_13q14.2	0.441	1
Amp_10q22.3	Del_21q11.2	0.441	1
ASB10	18q-Del	0.442	1
ASB10	Del_8p23.2	0.442	1
CDKN1B	Del_6p25.3	0.442	1
FAM86B1	18q-Del	0.442	1
FAM86B1	Del_8p23.2	0.442	1
KRAS	Del_9p23	0.442	1
TCP10	Del_8p23.2	0.442	1
GRHL2	8p-Amp	0.442	1
GRHL2	18q-Del	0.442	1
ICOSLG	Del_9p23	0.442	1
MLC1	Del_9p23	0.442	1
OR6C76	Del_9p23	0.442	1
PRICKLE3	Del_6p25.3	0.442	1
C15orf39	18q-Del	0.442	1
CXCR3	Del_9p23	0.442	1
PSIP1	18q-Del	0.442	1
PSIP1	Del_8p23.2	0.442	1
TARBP2	Del_9p23	0.442	1
TCP11	Del_9p23	0.442	1
TPP2	18q-Del	0.442	1
USP36	8p-Amp	0.442	1
USP36	18q-Del	0.442	1
8q-Amp	9p-Del	0.442	1
1q-Del	Del_6p25.3	0.442	1
MAP2K4	5p-Amp	0.443	1
MAP2K4	Amp_11p13	0.443	1
RB1	6q-Del	0.443	1
8p-Del	Amp_12p13.33	0.443	1
Amp_3p25.1	Amp_10q22.3	0.443	1
TBX3	15q-Del	0.444	1
TBX3	9q-Del	0.444	1
TBX3	Del_20p13	0.444	1
20q-Amp	Amp_1p22.3	0.444	1
Amp_11p13	Del_7q36.1	0.444	1
GPS2	Amp_12q15	0.445	1
GPS2	Del_7q36.1	0.445	1
RUNX1	TBX3	0.445	1
THEM5	Amp_12q15	0.445	1
ATXN2	8p-Del	0.445	1
IRS4	Del_7q36.1	0.445	1
MED23	8p-Del	0.445	1
ZMYM3	8p-Del	0.445	1
ZNF687	Amp_12q15	0.445	1
7p-Amp	Amp_4q13.3	0.445	1
ASB10	6q-Del	0.446	1
GPS2	Del_6q15	0.446	1
HIST1H3B	Del_6q15	0.446	1
PIK3R1	Del_12q24.31	0.446	1
PTEN	Del_12q23.1	0.446	1
FBXO17	Del_3p21.31	0.446	1
FBXO17	Del_9p21.3	0.446	1
FXYD5	Del_9p21.3	0.446	1
GYG2	6q-Del	0.446	1
ZNF41	Del_6q15	0.446	1
C15orf39	6q-Del	0.446	1
CDC42EP1	Del_3p21.31	0.446	1
CDC42EP1	Del_9p21.3	0.446	1
FGFR2	Del_6q15	0.446	1
PCNXL2	Del_13q14.2	0.446	1
PSIP1	6q-Del	0.446	1
SLC35B2	6q-Del	0.446	1
TPP2	6q-Del	0.446	1
USP36	6q-Del	0.446	1
ZNF687	Del_6q15	0.446	1
16p-Amp	Amp_3p25.1	0.446	1
CASP8	Del_3p21.31	0.447	1
CTCF	Amp_8p11.23	0.447	1
FBXW7	Amp_17q23.1	0.447	1
PIWIL1	Amp_8p11.23	0.447	1
TAF1L	Amp_8p11.23	0.447	1
FHOD3	Del_3p21.31	0.447	1
PRICKLE3	16q-Del	0.447	1
ATHL1	16q-Del	0.447	1
FRMPD2	Del_3p21.31	0.447	1
C1QTNF5	Del_5q11.2	0.448	1
CTCF	Amp_3p25.1	0.448	1
CTCF	Del_7p22.3	0.448	1
HLA-DRB5	Amp_1q44	0.448	1
PIK3R1	Del_11p15.5	0.448	1
PTHLH	Del_4p16.3	0.448	1
SF3B1	Del_17p12	0.448	1
SMAD2	Del_4p16.3	0.448	1
SMAD2	Del_5q11.2	0.448	1
TAF1L	Amp_3p25.1	0.448	1
ZFP36L2	Del_4p16.3	0.448	1
ANKRD12	Del_7p22.3	0.448	1
ERBB3	Amp_3p25.1	0.448	1
HRNR	20p-Amp	0.448	1
OR2T35	Amp_1q44	0.448	1
OR4D10	Del_4p16.3	0.448	1
OR4D10	Del_5q11.2	0.448	1
WDR52	Del_17p12	0.448	1
KDM6A	Del_17p12	0.448	1
PAX2	Amp_1q44	0.448	1
TFE3	Del_5q11.2	0.448	1
TNRC6B	Amp_3p25.1	0.448	1
ZNF362	Amp_1q44	0.448	1
1q-Amp	Del_13q14.2	0.448	1
MAP3K1	17q-Amp	0.449	1
NCOR1	Del_9q21.11	0.449	1
PTEN	20q-Amp	0.449	1
16p-Amp	Del_18q23	0.449	1
CDH1	16p-Del	0.45	1
ERBB2	8q-Amp	0.45	1
GATA3	Del_15q13.1	0.45	1
GPS2	MLL3	0.45	1
MLL3	THEM5	0.45	1
WSCD2	5q-Del	0.45	1
CASZ1	5q-Del	0.45	1
DLG1	5q-Del	0.45	1
MED23	Amp_13q34	0.45	1
RBMX	Amp_13q34	0.45	1
ZMYM3	Amp_13q34	0.45	1
18q-Del	Amp_15q26.3	0.45	1
C1QTNF5	Del_1p22.1	0.451	1
CDH1	ZFP36L2	0.451	1
CDH1	ANKRD20A4	0.451	1
CDH1	MR1	0.451	1
CDH1	5p-Amp	0.451	1
MLL3	Amp_12p13.33	0.451	1
NCOR1	4p-Del	0.451	1
SMAD4	Del_1p22.1	0.451	1
ZFP36L2	Del_1p22.1	0.451	1
CCNL2	Del_1p22.1	0.451	1
FHOD3	Del_13q14.2	0.451	1
ANKRD20A4	Del_1p22.1	0.451	1
MR1	Del_1p22.1	0.451	1
TFE3	Del_1p22.1	0.451	1
TGS1	Del_13q14.2	0.451	1
5p-Amp	Del_1p22.1	0.451	1
CDKN1B	Del_12p13.1	0.452	1
RB1	17q-Amp	0.452	1
RB1	Amp_4q13.3	0.452	1
FBXO17	11q-Del	0.452	1
FXYD5	11q-Del	0.452	1
PRICKLE3	Del_12p13.1	0.452	1
SHISA4	11q-Del	0.452	1
CDC42EP1	11q-Del	0.452	1
NBPF9	11q-Del	0.452	1
6q-Del	Del_5q11.2	0.452	1
Amp_1q21.3	Amp_4q13.3	0.452	1
APC	16p-Amp	0.453	1
ARID1A	Del_5q11.2	0.453	1
MYB	Amp_15q26.3	0.453	1
TP53	ZFP36L1	0.453	1
MYH9	16p-Amp	0.453	1
FRMPD2	Amp_15q26.3	0.453	1
MLL4	Amp_11q13.3	0.453	1
TGS1	Amp_15q26.3	0.453	1
TNRC6B	13q-Del	0.453	1
ZMYM3	Del_9p23	0.453	1
Amp_8p11.23	Del_3p21.31	0.453	1
APC	Del_19q13.32	0.454	1
SF3B1	Del_19q13.32	0.454	1
DNAH12	Del_19q13.32	0.454	1
MYH9	Del_19q13.32	0.454	1
WDR52	Del_19q13.32	0.454	1
KDM6A	Del_19q13.32	0.454	1
11q-Del	Amp_10q22.3	0.454	1
CBFB	MAP2K4	0.455	1
FOXA1	MAP2K4	0.455	1
MAP2K4	Del_11p15.5	0.455	1
MAP2K4	Del_14q24.1	0.455	1
SPRR2B	Del_13q14.2	0.455	1
MYB	11q-Del	0.456	1
UBC	11q-Del	0.456	1
20p-Amp	Amp_13q34	0.456	1
HRNR	Del_5q21.3	0.457	1
Amp_13q34	Del_9p21.3	0.457	1
KRAS	Del_19p13.3	0.458	1
RPGR	Amp_1p22.3	0.458	1
RUNX1	Del_10q26.3	0.458	1
ANKRD12	Amp_1p22.3	0.458	1
ERBB3	Amp_1p22.3	0.458	1
OR6C76	Del_19p13.3	0.458	1
CABYR	Del_19p13.3	0.458	1
CEP57	Del_19p13.3	0.458	1
CXCR3	Del_19p13.3	0.458	1
DOCK11	22q-Del	0.458	1
TCP11	Del_19p13.3	0.458	1
7p-Amp	Del_17q21.31	0.458	1
APC	20q-Amp	0.459	1
NCOR1	17q-Del	0.459	1
RUNX1	Amp_15q26.3	0.459	1
SMAD2	Amp_3q26.32	0.459	1
ZFP36L2	Amp_3q26.32	0.459	1
DNAH12	20q-Amp	0.459	1
MYH9	20q-Amp	0.459	1
MYH9	Amp_11q14.1	0.459	1
OR4D10	Amp_3q26.32	0.459	1
MR1	Amp_3q26.32	0.459	1
SPEN	5q-Del	0.459	1
TFE3	Amp_3q26.32	0.459	1
14q-Del	Amp_4q13.3	0.459	1
Amp_3q26.32	Del_19q13.32	0.459	1
Amp_17q23.1	Amp_19q12	0.459	1
ARID1A	Del_1p22.1	0.46	1
NF1	Del_1p22.1	0.46	1
18p-Del	Amp_4q13.3	0.46	1
Amp_11q14.1	Amp_13q34	0.46	1
AARS	Del_2q37.3	0.461	1
AARS	Del_17p12	0.461	1
APC	Amp_8q24.21	0.461	1
GPS2	15q-Del	0.461	1
GPS2	9q-Del	0.461	1
PIWIL1	Del_11q23.3	0.461	1
THEM5	15q-Del	0.461	1
AKD1	18p-Del	0.461	1
GPRIN2	15q-Del	0.461	1
GPRIN2	Del_20p13	0.461	1
HLA-C	Del_17p12	0.461	1
HRNR	Amp_11p13	0.461	1
ZNF41	9q-Del	0.461	1
FGFR2	Del_20p13	0.461	1
IRS4	15q-Del	0.461	1
IRS4	9q-Del	0.461	1
KCNN3	Del_17p12	0.461	1
ZNF687	15q-Del	0.461	1
ZNF687	9q-Del	0.461	1
HLA-DRB5	Amp_1q21.3	0.462	1
TAF1L	Del_6q15	0.462	1
TBX3	Amp_10p15.1	0.462	1
AKD1	Amp_10q22.3	0.462	1
ATXN2	Amp_1q21.3	0.462	1
DNAH12	7p-Amp	0.462	1
ERBB3	Del_6q15	0.462	1
MYH9	7p-Amp	0.462	1
OR2T35	Amp_1q21.3	0.462	1
PRICKLE3	Del_16q24.3	0.462	1
ANGPT4	Del_16q24.3	0.462	1
KDM6A	7p-Amp	0.462	1
RBMX	Amp_1q21.3	0.462	1
RHBG	Amp_1q21.3	0.462	1
TNRC6B	Del_6q15	0.462	1
ZMYM3	Amp_1q21.3	0.462	1
ZNF362	Amp_1q21.3	0.462	1
ASB10	20p-Amp	0.463	1
C1QTNF5	Amp_1p22.3	0.463	1
FAM86B1	20p-Amp	0.463	1
PTHLH	Amp_1p22.3	0.463	1
WSCD2	5p-Amp	0.463	1
WSCD2	Amp_6q21	0.463	1
WSCD2	Amp_11p13	0.463	1
ATXN7L1	Amp_1p22.3	0.463	1
GRHL2	20p-Amp	0.463	1
MORN1	20p-Amp	0.463	1
OR4D10	Amp_1p22.3	0.463	1
ANKRD20A4	Amp_1p22.3	0.463	1
ATHL1	4q-Del	0.463	1
C15orf39	20p-Amp	0.463	1
CASZ1	Amp_6q21	0.463	1
CASZ1	Amp_11p13	0.463	1
CASZ1	Amp_19q13.42	0.463	1
DLG1	Amp_6q21	0.463	1
DLG1	Amp_11p13	0.463	1
DLG1	Amp_19q13.42	0.463	1
MR1	Amp_1p22.3	0.463	1
CTCF	Amp_10p15.1	0.464	1
MAP2K4	Amp_13q34	0.464	1
RPGR	Amp_10p15.1	0.464	1
ATXN2	1p-Del	0.464	1
ERBB3	Amp_10p15.1	0.464	1
EIF4A2	Amp_1q21.3	0.464	1
KCNN3	Amp_1q21.3	0.464	1
MUC6	Amp_14q21.1	0.464	1
ZMYM3	1p-Del	0.464	1
ZMYM3	Amp_14q21.1	0.464	1
8q-Amp	Del_9q21.11	0.464	1
16q-Del	Amp_15q26.3	0.464	1
ARID1A	15q-Del	0.465	1
ASB10	Amp_11q13.3	0.465	1
CTCF	Amp_19p13.12	0.465	1
HIST1H2BC	Del_14q24.1	0.465	1
HIST1H3B	Del_6q27	0.465	1
KRAS	Del_11p15.5	0.465	1
KRAS	Del_14q24.1	0.465	1
MLL3	14q-Del	0.465	1
MLL3	17q-Del	0.465	1
MLL3	Amp_19q12	0.465	1
PIWIL1	Amp_19p13.12	0.465	1
RPGR	Amp_19p13.12	0.465	1
ANKRD12	Amp_19p13.12	0.465	1
COL6A5	Del_6q27	0.465	1
ERBB3	Amp_19p13.12	0.465	1
GPRIN2	Del_6q27	0.465	1
GRHL2	Amp_11q13.3	0.465	1
ICOSLG	Del_14q24.1	0.465	1
OR6C76	Del_11p15.5	0.465	1
OR6C76	Del_14q24.1	0.465	1
C15orf39	Amp_11q13.3	0.465	1
CABYR	Del_11q23.3	0.465	1
CABYR	Del_14q24.1	0.465	1
CCDC82	Del_14q24.1	0.465	1
CEP57	Del_11p15.5	0.465	1
CXCR3	Del_11p15.5	0.465	1
CXCR3	Del_14q24.1	0.465	1
FGFR2	Del_6q27	0.465	1
NF1	15q-Del	0.465	1
NF1	9q-Del	0.465	1
RHOA	Del_11p15.5	0.465	1
RHOA	Del_11q23.3	0.465	1
RHOA	Del_14q24.1	0.465	1
TARBP2	Del_11q23.3	0.465	1
TARBP2	Del_14q24.1	0.465	1
TCP11	Del_11p15.5	0.465	1
TCP11	Del_14q24.1	0.465	1
AARS	Del_9q34.2	0.466	1
C1QTNF5	Amp_10p15.1	0.466	1
NCOR1	Del_9p21.3	0.466	1
RUNX1	4p-Del	0.466	1
SMAD2	Amp_10p15.1	0.466	1
VCPIP1	11p-Del	0.466	1
ZFP36L1	11p-Del	0.466	1
HLA-C	11p-Del	0.466	1
HLA-C	Del_9q34.2	0.466	1
NFE2L3	Del_9q34.2	0.466	1
OR4D10	Amp_10p15.1	0.466	1
SPRR2B	Amp_8p11.23	0.466	1
ANKRD20A4	Amp_10p15.1	0.466	1
EIF4A2	Del_9q34.2	0.466	1
KCNN3	11p-Del	0.466	1
MR1	Amp_10p15.1	0.466	1
17q-Amp	Del_9p21.3	0.466	1
C1QTNF5	8q-Amp	0.467	1
FOXA1	HRNR	0.467	1
PTHLH	8q-Amp	0.467	1
ZFP36L2	8q-Amp	0.467	1
ATXN7L1	8q-Amp	0.467	1
GRHL2	Del_5q21.3	0.467	1
GYG2	Del_5q21.3	0.467	1
ANKRD20A4	8q-Amp	0.467	1
PCNXL2	Del_18q23	0.467	1
PSIP1	Del_5q21.3	0.467	1
ACTL6B	Amp_12p13.33	0.468	1
ACTL6B	Del_9q21.11	0.468	1
CBFB	Del_12p13.1	0.468	1
CDKN1B	MAP3K1	0.468	1
CDKN1B	Amp_12p13.33	0.468	1
CDKN1B	Del_9q21.11	0.468	1
FOXA1	Del_11p15.5	0.468	1
MAP3K1	ANGPT4	0.468	1
NCOR1	18q-Del	0.468	1
PTPN22	Amp_12p13.33	0.468	1
TBL1XR1	Amp_12p13.33	0.468	1
TBL1XR1	Del_9q21.11	0.468	1
ANGPT4	Amp_12p13.33	0.468	1
ATHL1	Amp_12p13.33	0.468	1
DOCK11	Amp_17q23.1	0.468	1
RB1	20p-Amp	0.469	1
VCPIP1	22q-Del	0.469	1
DNAH12	Amp_17q12	0.469	1
NFE2L3	22q-Del	0.469	1
KCNN3	22q-Del	0.469	1
APC	1q-Amp	0.47	1
APC	Amp_3p25.1	0.47	1
APC	Del_5q11.2	0.47	1
APC	Del_7p22.3	0.47	1
CDKN1B	Amp_17q12	0.47	1
NCOR1	Del_7q36.1	0.47	1
SF3B1	Del_4p16.3	0.47	1
SF3B1	Del_7p22.3	0.47	1
TBL1XR1	Amp_17q12	0.47	1
DNAH12	1q-Amp	0.47	1
DNAH12	Del_5q11.2	0.47	1
MYH9	Amp_3p25.1	0.47	1
MYH9	Del_7p22.3	0.47	1
KDM6A	Del_4p16.3	0.47	1
KDM6A	Del_7p22.3	0.47	1
17q-Amp	Del_7q36.1	0.47	1
8p-Del	Amp_10p15.1	0.47	1
MAP2K4	Del_3p21.31	0.471	1
PIK3CA	Del_12p13.1	0.471	1
MUC6	Del_12q23.1	0.471	1
MUC6	Del_12q24.31	0.471	1
RBMX	Del_12q23.1	0.471	1
ZMYM3	Del_12q24.31	0.471	1
1q-Amp	Amp_10q22.3	0.471	1
Amp_1p22.3	Del_6p25.3	0.471	1
AQP12A	16q-Del	0.472	1
KRAS	16q-Del	0.472	1
AKD1	Amp_4q13.3	0.472	1
FHOD3	Amp_8p11.23	0.472	1
FRMPD2	Amp_8p11.23	0.472	1
TARBP2	16q-Del	0.472	1
ACTL6B	14q-Del	0.473	1
ACTL6B	17q-Del	0.473	1
CDKN1B	14q-Del	0.473	1
CDKN1B	Del_21q11.2	0.473	1
FOXA1	Del_6q15	0.473	1
HLA-DRB5	Amp_17q12	0.473	1
PTPN22	14q-Del	0.473	1
PTPN22	Amp_19q12	0.473	1
RAB42	Amp_17q12	0.473	1
RPGR	16q-Del	0.473	1
TAF1L	16q-Del	0.473	1
TBL1XR1	17q-Del	0.473	1
TBL1XR1	Amp_19q12	0.473	1
TBL1XR1	Del_21q11.2	0.473	1
CCL13	Amp_17q12	0.473	1
DST	20q-Amp	0.473	1
DST	Amp_11q14.1	0.473	1
HRNR	Amp_6p23	0.473	1
OR2T35	Amp_17q12	0.473	1
PRICKLE3	Amp_19q12	0.473	1
PRICKLE3	Del_21q11.2	0.473	1
ANGPT4	14q-Del	0.473	1
ANGPT4	Amp_19q12	0.473	1
ANGPT4	Del_21q11.2	0.473	1
PCNXL2	Del_17q21.31	0.473	1
RIBC1	Amp_17q12	0.473	1
TTPAL	Amp_17q12	0.473	1
ZBTB7C	Amp_17q12	0.473	1
16p-Amp	Del_9q21.11	0.473	1
1q-Del	Amp_19q12	0.473	1
PIK3CA	DLX6	0.474	1
PIK3CA	AKT2	0.474	1
PIK3CA	MKL1	0.474	1
SMAD4	Del_10q23.31	0.474	1
ABCA8	Del_15q13.1	0.474	1
ANKRD20A4	Del_10q23.31	0.474	1
MR1	Del_10q23.31	0.474	1
NF1	Amp_3q26.32	0.474	1
PCNXL2	Del_2q37.3	0.474	1
APC	Del_1p22.1	0.475	1
PIWIL1	Del_10q23.31	0.475	1
SF3B1	Del_1p22.1	0.475	1
TAF1L	Del_10q23.31	0.475	1
ZFP36L1	Amp_17q23.1	0.475	1
WDR52	Del_1p22.1	0.475	1
TNRC6B	Del_10q23.31	0.475	1
16p-Amp	Del_10q23.31	0.475	1
FAM86B1	Amp_6p23	0.476	1
SF3B1	Del_13q14.2	0.476	1
WSCD2	Amp_13q34	0.476	1
GRHL2	Amp_6p23	0.476	1
WDR52	Del_13q14.2	0.476	1
DLG1	Amp_13q34	0.476	1
KDM6A	Del_13q14.2	0.476	1
PSIP1	Amp_6p23	0.476	1
SLC35B2	Amp_6p23	0.476	1
TPP2	Amp_6p23	0.476	1
1q-Amp	Del_14q24.1	0.476	1
FBXW7	Del_19q13.32	0.477	1
MED23	Del_19p13.3	0.477	1
AARS	1q-Amp	0.478	1
C1QTNF5	GATA3	0.478	1
C1QTNF5	9p-Del	0.478	1
C1QTNF5	Del_10q26.3	0.478	1
CASP8	5q-Del	0.478	1
CBFB	7q-Amp	0.478	1
FOXA1	7q-Amp	0.478	1
GATA3	SMAD2	0.478	1
GATA3	ANKRD20A4	0.478	1
GATA3	MR1	0.478	1
MYB	5q-Del	0.478	1
SMAD4	9p-Del	0.478	1
THEM5	Amp_8q24.21	0.478	1
ZFP36L2	Del_10q26.3	0.478	1
GPRIN2	Amp_8q24.21	0.478	1
HLA-C	1q-Amp	0.478	1
PPEF1	Amp_8q24.21	0.478	1
UBC	5q-Del	0.478	1
ANKRD20A4	Del_10q26.3	0.478	1
EIF4A2	1q-Amp	0.478	1
KCNN3	1q-Amp	0.478	1
MR1	9p-Del	0.478	1
TGS1	5q-Del	0.478	1
ACTL6B	Amp_12q15	0.479	1
CDKN1B	Amp_12q15	0.479	1
CDKN1B	Del_7q36.1	0.479	1
PTPN22	Del_7q36.1	0.479	1
TBL1XR1	Amp_12q15	0.479	1
PRICKLE3	Amp_12q15	0.479	1
PRICKLE3	Del_7q36.1	0.479	1
ANGPT4	Amp_12q15	0.479	1
ATHL1	Del_7q36.1	0.479	1
SPEN	5p-Amp	0.479	1
SPEN	Amp_6q21	0.479	1
1q-Del	Del_7q36.1	0.479	1
Amp_1q21.3	Amp_17q12	0.479	1
AARS	Del_6p25.3	0.48	1
GATA3	13q-Del	0.48	1
GPS2	Del_1p36.13	0.48	1
VCPIP1	Del_6p25.3	0.48	1
HLA-C	Del_6p25.3	0.48	1
SPEN	Del_5q21.3	0.48	1
CASP8	TP53	0.481	1
CTCF	GATA3	0.481	1
GATA3	RPGR	0.481	1
MYB	TP53	0.481	1
RUNX1	8p-Amp	0.481	1
RUNX1	18q-Del	0.481	1
HRNR	Amp_13q34	0.481	1
DOCK11	17p-Del	0.481	1
NF1	Amp_1p22.3	0.481	1
PCNXL2	Del_9q34.2	0.481	1
TNRC6B	9p-Del	0.481	1
5p-Amp	Del_20p13	0.481	1
11q-Del	Amp_4q13.3	0.481	1
HIST1H2BC	Del_4q35.1	0.482	1
KRAS	Del_4q35.1	0.482	1
KRAS	Del_15q13.1	0.482	1
MAP3K1	1p-Del	0.482	1
PIK3CA	7p-Amp	0.482	1
THEM5	8q-Amp	0.482	1
ZFP36L2	4p-Del	0.482	1
OR4D10	4p-Del	0.482	1
OR6C76	Del_4q35.1	0.482	1
OR6C76	Del_15q13.1	0.482	1
CABYR	Del_4q35.1	0.482	1
CABYR	Del_15q13.1	0.482	1
CEP57	Del_4q35.1	0.482	1
CXCR3	Del_15q13.1	0.482	1
FGFR2	8q-Amp	0.482	1
RHOA	Del_15q13.1	0.482	1
TARBP2	Del_15q13.1	0.482	1
TCP11	Del_4q35.1	0.482	1
20q-Amp	Amp_15q26.3	0.482	1
Amp_17q12	Del_15q13.1	0.482	1
PIWIL1	Amp_10q22.3	0.483	1
RPGR	Amp_10q22.3	0.483	1
TNRC6B	Amp_10q22.3	0.483	1
5q-Del	Amp_17q12	0.483	1
Amp_1q44	Amp_19q12	0.483	1
MAP2K4	11q-Del	0.484	1
MAP3K1	Amp_11q14.1	0.484	1
MLL3	PRICKLE3	0.484	1
MLL3	1q-Del	0.484	1
PTEN	16q-Del	0.484	1
HRNR	Del_11q23.3	0.484	1
FBXW7	7p-Amp	0.485	1
HIST1H3B	Amp_15q26.3	0.485	1
MAP2K4	1p-Del	0.485	1
MAP2K4	Amp_14q21.1	0.485	1
PIK3CA	USP36	0.485	1
ZFP36L2	17p-Del	0.485	1
ABCA8	7p-Amp	0.485	1
AKD1	Del_9p21.3	0.485	1
CCNL2	17p-Del	0.485	1
GPRIN2	Amp_15q26.3	0.485	1
HRNR	Amp_1q21.3	0.485	1
BCORL1	7p-Amp	0.485	1
DLG1	Del_11q23.3	0.485	1
APC	Amp_3q26.32	0.486	1
PIWIL1	Del_6q27	0.486	1
TAF1L	Del_6q27	0.486	1
ZFP36L2	18p-Del	0.486	1
ATXN7L1	18p-Del	0.486	1
DNAH12	Amp_3q26.32	0.486	1
ERBB3	Del_6q27	0.486	1
OR4D10	18p-Del	0.486	1
ANKRD20A4	18p-Del	0.486	1
KDM6A	Amp_3q26.32	0.486	1
TFE3	18p-Del	0.486	1
TNRC6B	Del_6q27	0.486	1
7p-Amp	Del_2q37.3	0.486	1
7q-Amp	22q-Del	0.486	1
Amp_1q44	Amp_10q22.3	0.486	1
Amp_13q34	Amp_20q13.2	0.486	1
APC	Amp_19p13.12	0.487	1
CTCF	4p-Del	0.487	1
HLA-DRB5	13q-Del	0.487	1
MLL3	Amp_13q34	0.487	1
SF3B1	Amp_19p13.12	0.487	1
ATXN2	Del_11p15.5	0.487	1
OR2T35	13q-Del	0.487	1
SPRR2B	Amp_11q13.3	0.487	1
WDR52	Amp_19p13.12	0.487	1
XBP1	13q-Del	0.487	1
DLG1	Amp_8p11.21	0.487	1
KDM6A	Amp_19p13.12	0.487	1
MED23	Del_14q24.1	0.487	1
OXCT2	13q-Del	0.487	1
RBMX	Del_14q24.1	0.487	1
RIBC1	13q-Del	0.487	1
SDC1	Amp_11q13.3	0.487	1
TNRC6B	4p-Del	0.487	1
TTPAL	13q-Del	0.487	1
ZBTB7C	13q-Del	0.487	1
MAP2K4	PCNXL2	0.488	1
RUNX1	COL6A5	0.488	1
20p-Amp	4p-Del	0.488	1
Amp_1q21.3	Del_19p13.3	0.488	1
GPRIN2	Amp_1q44	0.489	1
GYG2	Del_22q13.32	0.489	1
OR4D10	Del_16q24.3	0.489	1
BCORL1	16p-Amp	0.489	1
MR1	Del_16q24.3	0.489	1
SLC35B2	Del_22q13.32	0.489	1
TFE3	Del_16q24.3	0.489	1
Amp_3q26.32	Amp_8p11.23	0.489	1
GATA3	Del_19p13.3	0.49	1
PTHLH	8p-Amp	0.49	1
SMAD2	8p-Amp	0.49	1
WSCD2	Amp_14q21.1	0.49	1
ZFP36L1	Del_12p13.1	0.49	1
ZFP36L2	8p-Amp	0.49	1
ZFP36L2	18q-Del	0.49	1
ATXN7L1	8p-Amp	0.49	1
ATXN7L1	18q-Del	0.49	1
CCNL2	8p-Amp	0.49	1
OR4D10	8p-Amp	0.49	1
OR4D10	18q-Del	0.49	1
ANKRD20A4	8p-Amp	0.49	1
CASZ1	1p-Del	0.49	1
CASZ1	Amp_14q21.1	0.49	1
DLG1	1p-Del	0.49	1
DLG1	Amp_14q21.1	0.49	1
MLL4	1p-Del	0.49	1
MR1	8p-Amp	0.49	1
TFE3	8p-Amp	0.49	1
TFE3	18q-Del	0.49	1
16p-Amp	1p-Del	0.49	1
16p-Amp	Amp_19q12	0.49	1
Amp_11q13.3	Del_12q24.31	0.49	1
Amp_13q34	Del_1p22.1	0.49	1
CASP8	5p-Amp	0.491	1
CASP8	Amp_6q21	0.491	1
CASP8	Amp_11p13	0.491	1
CASP8	Amp_19q13.42	0.491	1
CBFB	MAP3K1	0.491	1
MYB	5p-Amp	0.491	1
MYB	Amp_6q21	0.491	1
MYB	Amp_19q13.42	0.491	1
UBC	Amp_19q13.42	0.491	1
UBC	Del_17p12	0.491	1
FRMPD2	5p-Amp	0.491	1
FRMPD2	Amp_6q21	0.491	1
FRMPD2	Amp_11p13	0.491	1
FRMPD2	Amp_19q13.42	0.491	1
NF1	Del_16q24.3	0.491	1
TGS1	5p-Amp	0.491	1
TGS1	Amp_11p13	0.491	1
TGS1	Amp_19q13.42	0.491	1
8p-Amp	14q-Del	0.491	1
Amp_8p11.21	Del_18q23	0.491	1
APC	Amp_1p22.3	0.492	1
ASB10	Amp_8p11.21	0.492	1
CBFB	Amp_20q13.2	0.492	1
CDKN1B	13q-Del	0.492	1
CTCF	NCOR1	0.492	1
CTCF	17q-Amp	0.492	1
CTCF	Amp_4q13.3	0.492	1
HIST1H2BC	16p-Amp	0.492	1
HLA-DRB5	Del_6q15	0.492	1
MAP2K4	Del_15q13.1	0.492	1
NCOR1	Del_11p15.5	0.492	1
PTPN22	13q-Del	0.492	1
RAB42	Del_6q15	0.492	1
SF3B1	Amp_1p22.3	0.492	1
TBL1XR1	13q-Del	0.492	1
ANKRD12	17q-Amp	0.492	1
DNAH12	Amp_1p22.3	0.492	1
ERBB3	Amp_4q13.3	0.492	1
GRHL2	Amp_8p11.21	0.492	1
MLC1	16p-Amp	0.492	1
PRICKLE3	13q-Del	0.492	1
XBP1	Del_6q15	0.492	1
CCDC82	16p-Amp	0.492	1
OXCT2	Del_6q15	0.492	1
PSIP1	Amp_8p11.21	0.492	1
RHBG	Del_6q15	0.492	1
RHOA	16p-Amp	0.492	1
RIBC1	Del_6q15	0.492	1
SLC35B2	Amp_8p11.21	0.492	1
TCP11	16p-Amp	0.492	1
TNRC6B	17q-Amp	0.492	1
TNRC6B	Amp_4q13.3	0.492	1
TTPAL	Del_6q15	0.492	1
17q-Amp	Del_11p15.5	0.492	1
Amp_4q13.3	Del_11p15.5	0.492	1
CTCF	18p-Del	0.493	1
PIWIL1	18p-Del	0.493	1
TAF1L	18p-Del	0.493	1
ABCA8	8q-Amp	0.493	1
C1QTNF5	6q-Del	0.494	1
C1QTNF5	Del_13q14.2	0.494	1
PTHLH	6q-Del	0.494	1
PTHLH	Del_13q14.2	0.494	1
SMAD2	6q-Del	0.494	1
ANKRD12	Amp_11q13.3	0.494	1
ATXN7L1	6q-Del	0.494	1
OR4D10	6q-Del	0.494	1
OR4D10	Del_13q14.2	0.494	1
ANKRD20A4	6q-Del	0.494	1
CASZ1	Del_9p23	0.494	1
DLG1	Del_9p23	0.494	1
DOCK11	Del_13q14.2	0.494	1
MR1	Del_13q14.2	0.494	1
ACTL6B	15q-Del	0.495	1
ACTL6B	9q-Del	0.495	1
CDKN1B	15q-Del	0.495	1
CDKN1B	9q-Del	0.495	1
CDKN1B	Del_20p13	0.495	1
EPDR1	Del_18q23	0.495	1
HIST1H2BC	20q-Amp	0.495	1
HIST1H2BC	Amp_11q14.1	0.495	1
KRAS	20q-Amp	0.495	1
KRAS	Amp_11q14.1	0.495	1
PTPN22	15q-Del	0.495	1
TBL1XR1	15q-Del	0.495	1
TBL1XR1	9q-Del	0.495	1
WSCD2	Amp_20q13.2	0.495	1
AKD1	11q-Del	0.495	1
DLX6	Del_18q23	0.495	1
FBXO17	Del_18q23	0.495	1
MLC1	20q-Amp	0.495	1
OR6C76	20q-Amp	0.495	1
OR6C76	Amp_11q14.1	0.495	1
PRICKLE3	15q-Del	0.495	1
PRICKLE3	Del_20p13	0.495	1
ANGPT4	15q-Del	0.495	1
ANGPT4	9q-Del	0.495	1
CABYR	Amp_11q14.1	0.495	1
CASZ1	16q-Del	0.495	1
CASZ1	Amp_20q13.2	0.495	1
CCDC82	20q-Amp	0.495	1
RHOA	20q-Amp	0.495	1
TCP11	Amp_11q14.1	0.495	1
Amp_6q21	Del_6q27	0.495	1
GPS2	Del_3p21.31	0.496	1
GPS2	Del_9p21.3	0.496	1
HIST1H3B	Del_9p21.3	0.496	1
RUNX1	Del_17q21.31	0.496	1
SF3B1	13q-Del	0.496	1
GPRIN2	Del_9p21.3	0.496	1
PPEF1	Del_3p21.31	0.496	1
PPEF1	Del_9p21.3	0.496	1
IRS4	Del_3p21.31	0.496	1
KDM6A	13q-Del	0.496	1
SPEN	Amp_6p23	0.496	1
ZNF687	Del_9p21.3	0.496	1
7p-Amp	11p-Del	0.496	1
WSCD2	Del_12q23.1	0.497	1
DNAH12	Amp_10p15.1	0.497	1
DST	Del_6p25.3	0.497	1
DLG1	Del_12q24.31	0.497	1
RBMX	Amp_17q23.1	0.497	1
ZMYM3	Amp_17q23.1	0.497	1
16p-Amp	16q-Del	0.497	1
Amp_1q21.3	Del_6p25.3	0.497	1
ASB10	Amp_20q13.2	0.498	1
EPDR1	Del_17q21.31	0.498	1
GRHL2	Amp_20q13.2	0.498	1
GYG2	Amp_20q13.2	0.498	1
AKT2	Del_17q21.31	0.498	1
PSIP1	Amp_20q13.2	0.498	1
USP36	Amp_20q13.2	0.498	1
15q-Del	Amp_8p11.23	0.498	1
Amp_17q12	Del_22q13.32	0.498	1
CBFB	Del_21q11.2	0.499	1
CTCF	8p-Amp	0.499	1
CTCF	18q-Del	0.499	1
FOXA1	14q-Del	0.499	1
FOXA1	17q-Del	0.499	1
PIWIL1	8p-Amp	0.499	1
TAF1L	18q-Del	0.499	1
WSCD2	8p-Del	0.499	1
ERBB3	8p-Amp	0.499	1
CASZ1	8p-Del	0.499	1
DLG1	8p-Del	0.499	1
8p-Amp	22q-Del	0.499	1
Del_9q21.11	Del_12q24.31	0.499	1
AARS	4q-Del	0.5	1
TBL1XR1	Del_6q15	0.5	1
VCPIP1	4q-Del	0.5	1
ZFP36L1	4q-Del	0.5	1
NFE2L3	4q-Del	0.5	1
KCNN3	4q-Del	0.5	1
4q-Del	Amp_1q44	0.5	1
Amp_11q14.1	Amp_14q21.1	0.5	1
ERBB2	Del_2q37.3	0.501	1
FAM86B1	8p-Del	0.501	1
NCOR1	Del_20p13	0.501	1
HRNR	Del_3p21.31	0.501	1
C15orf39	8p-Del	0.501	1
DOCK11	Del_18q23	0.501	1
MED23	Del_19q13.32	0.501	1
RBMX	Del_19q13.32	0.501	1
TPP2	8p-Del	0.501	1
17q-Amp	15q-Del	0.501	1
17q-Amp	Del_20p13	0.501	1
9q-Del	Amp_4q13.3	0.501	1
Amp_4q13.3	Del_20p13	0.501	1
Amp_10p15.1	Del_1p22.1	0.501	1
AQP12A	Del_5q11.2	0.502	1
HIST1H2BC	Del_4p16.3	0.502	1
HIST1H2BC	Del_5q11.2	0.502	1
KRAS	Del_4p16.3	0.502	1
KRAS	Del_5q11.2	0.502	1
MAP2K4	Del_2q37.3	0.502	1
RUNX1	13q-Del	0.502	1
HRNR	1p-Del	0.502	1
ICOSLG	Del_4p16.3	0.502	1
OR6C76	Del_4p16.3	0.502	1
OR6C76	Del_5q11.2	0.502	1
WDR52	Amp_1q21.3	0.502	1
CABYR	Del_4p16.3	0.502	1
CEP57	Del_5q11.2	0.502	1
CXCR3	Del_4p16.3	0.502	1
CXCR3	Del_5q11.2	0.502	1
TCP11	Del_4p16.3	0.502	1
TCP11	Del_5q11.2	0.502	1
16p-Amp	13q-Del	0.502	1
7p-Amp	11q-Del	0.502	1
4p-Del	Amp_1q44	0.502	1
AQP12A	Amp_8q24.21	0.503	1
FOXA1	RUNX1	0.503	1
RB1	Del_8p23.2	0.503	1
GYG2	Del_2q37.3	0.503	1
MLC1	Amp_8q24.21	0.503	1
MORN1	Del_2q37.3	0.503	1
CEP57	Amp_8q24.21	0.503	1
CXCR3	Amp_8q24.21	0.503	1
PSIP1	Del_2q37.3	0.503	1
SLC35B2	Del_2q37.3	0.503	1
TARBP2	Amp_8q24.21	0.503	1
USP36	Del_2q37.3	0.503	1
20q-Amp	Del_5q21.3	0.503	1
5p-Amp	Del_19q13.32	0.503	1
8q-Amp	Amp_1q44	0.503	1
6q-Del	Amp_19q12	0.503	1
Amp_11p13	Del_19q13.32	0.503	1
Amp_11q13.3	Del_12p13.1	0.503	1
APC	Amp_10q22.3	0.504	1
SF3B1	Amp_10q22.3	0.504	1
DNAH12	Amp_10q22.3	0.504	1
MYH9	Amp_10q22.3	0.504	1
SPRR2B	Amp_8p11.21	0.504	1
WDR52	Amp_10q22.3	0.504	1
KDM6A	Amp_10q22.3	0.504	1
SDC1	Amp_8p11.21	0.504	1
9q-Del	Amp_1q21.3	0.504	1
Amp_20q13.2	Del_5q21.3	0.504	1
AARS	Amp_12p13.33	0.505	1
AARS	Del_9q21.11	0.505	1
ERBB2	MAP2K4	0.505	1
FBXW7	Del_4p16.3	0.505	1
HLA-DRB5	Del_6q27	0.505	1
MAP2K4	DOCK11	0.505	1
MAP3K1	VCPIP1	0.505	1
MAP3K1	HLA-C	0.505	1
MYB	Amp_13q34	0.505	1
PIWIL1	6q-Del	0.505	1
PTEN	7p-Amp	0.505	1
RAB42	Del_6q27	0.505	1
TAF1L	6q-Del	0.505	1
TAF1L	Del_1p36.13	0.505	1
ZFP36L1	Amp_12p13.33	0.505	1
CCL13	Del_6q27	0.505	1
ERBB3	6q-Del	0.505	1
HLA-C	Del_9q21.11	0.505	1
NFE2L3	Del_9q21.11	0.505	1
EIF4A2	Del_9q21.11	0.505	1
FRMPD2	Amp_13q34	0.505	1
PAX2	Del_6q27	0.505	1
RHBG	Del_6q27	0.505	1
RIBC1	Del_6q27	0.505	1
TGS1	Amp_13q34	0.505	1
16p-Amp	Del_5q11.2	0.505	1
AQP12A	CDH1	0.506	1
CDH1	HIST1H2BC	0.506	1
CDH1	CABYR	0.506	1
CDH1	CXCR3	0.506	1
HIST1H2BC	Del_1p22.1	0.506	1
KRAS	Del_1p22.1	0.506	1
PTEN	Amp_10p15.1	0.506	1
SF3B1	Del_6q15	0.506	1
TBX3	8p-Amp	0.506	1
OR6C76	Del_1p22.1	0.506	1
CABYR	Del_1p22.1	0.506	1
CCDC82	Del_1p22.1	0.506	1
CEP57	Del_1p22.1	0.506	1
CXCR3	Del_1p22.1	0.506	1
SPEN	Del_1p36.13	0.506	1
TARBP2	Del_1p22.1	0.506	1
TCP11	Del_1p22.1	0.506	1
Amp_14q21.1	Del_7q36.1	0.506	1
ASB10	11p-Del	0.507	1
CBFB	Amp_12q15	0.507	1
FOXA1	8q-Amp	0.507	1
FOXA1	Amp_12q15	0.507	1
FOXA1	Del_7q36.1	0.507	1
MAP2K4	Del_22q13.32	0.507	1
PTEN	Del_17p12	0.507	1
RUNX1	17p-Del	0.507	1
TCP10	11p-Del	0.507	1
TCP10	Del_9q34.2	0.507	1
FBXO17	Del_9p23	0.507	1
FXYD5	Del_9p23	0.507	1
MORN1	Del_9q34.2	0.507	1
C15orf39	11p-Del	0.507	1
CDC42EP1	Del_9p23	0.507	1
MKL1	Del_9p23	0.507	1
PCNXL2	Amp_17q12	0.507	1
PSIP1	11p-Del	0.507	1
PSIP1	Del_9q34.2	0.507	1
Amp_12q15	Del_2q37.3	0.507	1
DST	Del_19q13.32	0.508	1
DOCK11	11p-Del	0.508	1
16p-Amp	Del_7q36.1	0.508	1
7p-Amp	17p-Del	0.508	1
Amp_1q44	Amp_19p13.12	0.508	1
GPS2	5q-Del	0.509	1
ABCA8	Amp_19p13.12	0.509	1
ATXN2	7p-Amp	0.509	1
COL6A5	Del_20p13	0.509	1
GPRIN2	5q-Del	0.509	1
ZNF41	5q-Del	0.509	1
KDM6A	Del_10q23.31	0.509	1
MED23	7p-Amp	0.509	1
MUC6	7p-Amp	0.509	1
SPEN	Del_11p15.5	0.509	1
AARS	14q-Del	0.51	1
AARS	17q-Del	0.51	1
AARS	Amp_19q12	0.51	1
GATA3	NF1	0.51	1
PTHLH	20p-Amp	0.51	1
SMAD2	20p-Amp	0.51	1
SMAD4	Amp_8p11.23	0.51	1
VCPIP1	14q-Del	0.51	1
VCPIP1	Del_21q11.2	0.51	1
ZFP36L1	Amp_19q12	0.51	1
ZFP36L1	Del_21q11.2	0.51	1
ZFP36L2	20p-Amp	0.51	1
DST	Del_11q23.3	0.51	1
HLA-C	17q-Del	0.51	1
HLA-C	Amp_19q12	0.51	1
NFE2L3	14q-Del	0.51	1
NFE2L3	17q-Del	0.51	1
OR4D10	20p-Amp	0.51	1
WDR52	Del_8p23.2	0.51	1
ANKRD20A4	20p-Amp	0.51	1
EIF4A2	14q-Del	0.51	1
EIF4A2	Amp_19q12	0.51	1
KCNN3	17q-Del	0.51	1
KCNN3	Amp_19q12	0.51	1
SDC1	8p-Del	0.51	1
TFE3	20p-Amp	0.51	1
Amp_1p22.3	Amp_3p25.1	0.51	1
Amp_10q22.3	Amp_11q13.3	0.51	1
Del_12q23.1	Del_21q11.2	0.51	1
PIK3R1	Del_1p22.1	0.511	1
CABYR	Amp_1q44	0.511	1
CCDC82	Amp_1q44	0.511	1
TCP11	Amp_1q44	0.511	1
ARID1A	PIK3CA	0.512	1
HIST1H3B	Amp_1q21.3	0.512	1
FHOD3	Amp_11q13.3	0.512	1
UBC	Amp_11q13.3	0.512	1
IRS4	Amp_1q21.3	0.512	1
MED23	Del_15q13.1	0.512	1
ZMYM3	Del_15q13.1	0.512	1
8p-Amp	Del_9q34.2	0.512	1
APC	Amp_4q13.3	0.513	1
HIST1H2BC	Amp_3q26.32	0.513	1
KRAS	Amp_3q26.32	0.513	1
SF3B1	Amp_4q13.3	0.513	1
HRNR	Del_12q24.31	0.513	1
ICOSLG	Amp_3q26.32	0.513	1
MLC1	Amp_3q26.32	0.513	1
MYH9	Amp_4q13.3	0.513	1
CABYR	Amp_3q26.32	0.513	1
KDM6A	Amp_4q13.3	0.513	1
RHOA	Amp_3q26.32	0.513	1
TARBP2	Amp_3q26.32	0.513	1
Amp_1q21.3	Amp_19q13.42	0.513	1
Amp_11q13.3	Del_4q35.1	0.513	1
C1QTNF5	Del_5q21.3	0.514	1
GATA3	MYH9	0.514	1
GATA3	WDR52	0.514	1
NCOR1	20p-Amp	0.514	1
RUNX1	Del_6q15	0.514	1
SF3B1	9p-Del	0.514	1
SMAD2	Del_5q21.3	0.514	1
OR4D10	Del_5q21.3	0.514	1
ANKRD20A4	Del_5q21.3	0.514	1
KDM6A	Del_10q26.3	0.514	1
MR1	Del_5q21.3	0.514	1
8q-Amp	18q-Del	0.514	1
Amp_11p13	Del_10q23.31	0.514	1
AARS	Amp_12q15	0.515	1
AARS	Del_7q36.1	0.515	1
FAM20C	Del_1p36.13	0.515	1
HLA-DRB5	Del_1p36.13	0.515	1
PIK3R1	Amp_17q12	0.515	1
RAB42	Del_1p36.13	0.515	1
VCPIP1	Del_7q36.1	0.515	1
ZFP36L1	Del_7q36.1	0.515	1
CCL13	Del_1p36.13	0.515	1
HLA-C	Amp_12q15	0.515	1
HLA-C	Del_7q36.1	0.515	1
NFE2L3	Del_7q36.1	0.515	1
OR2T35	Del_1p36.13	0.515	1
XBP1	Del_1p36.13	0.515	1
EIF4A2	Amp_12q15	0.515	1
EIF4A2	Del_7q36.1	0.515	1
KCNN3	Amp_12q15	0.515	1
KCNN3	Del_7q36.1	0.515	1
RHBG	Del_1p36.13	0.515	1
RIBC1	Del_1p36.13	0.515	1
TTPAL	Del_1p36.13	0.515	1
ZBTB7C	Del_1p36.13	0.515	1
ZNF362	Del_1p36.13	0.515	1
COL6A5	Del_1p22.1	0.516	1
IRS4	Del_13q14.2	0.516	1
AQP12A	Amp_1p22.3	0.517	1
HIST1H2BC	Amp_1p22.3	0.517	1
MLL3	Del_9p23	0.517	1
MLC1	Amp_1p22.3	0.517	1
CABYR	Amp_1p22.3	0.517	1
CCDC82	Amp_1p22.3	0.517	1
CEP57	Amp_1p22.3	0.517	1
MED23	Del_7p22.3	0.517	1
MUC6	Amp_3p25.1	0.517	1
RBMX	Amp_3p25.1	0.517	1
RBMX	Del_7p22.3	0.517	1
ZMYM3	Amp_3p25.1	0.517	1
ZMYM3	Del_7p22.3	0.517	1
Amp_8p11.21	Del_4q35.1	0.517	1
ACTL6B	Del_6q27	0.518	1
CASP8	1p-Del	0.518	1
CASP8	Amp_14q21.1	0.518	1
CDKN1B	Amp_15q26.3	0.518	1
CDKN1B	Del_6q27	0.518	1
MLL3	8p-Del	0.518	1
MYB	1p-Del	0.518	1
MYB	Amp_14q21.1	0.518	1
PTPN22	Del_6q27	0.518	1
TBL1XR1	Amp_15q26.3	0.518	1
TBX3	Amp_8p11.21	0.518	1
ZFP36L1	Del_11q23.3	0.518	1
FHOD3	1p-Del	0.518	1
FHOD3	Amp_14q21.1	0.518	1
HRNR	8q-Amp	0.518	1
NFE2L3	Del_11q23.3	0.518	1
PRICKLE3	Amp_15q26.3	0.518	1
PRICKLE3	Del_6q27	0.518	1
FRMPD2	1p-Del	0.518	1
FRMPD2	Amp_14q21.1	0.518	1
KCNN3	Del_11q23.3	0.518	1
TGS1	1p-Del	0.518	1
TGS1	Amp_14q21.1	0.518	1
PIK3CA	PTEN	0.519	1
CASZ1	Del_8p23.2	0.519	1
MLL4	Del_8p23.2	0.519	1
Amp_10q22.3	Amp_17q23.1	0.519	1
FBXW7	17p-Del	0.52	1
KRAS	Amp_10p15.1	0.52	1
MYB	Del_18q23	0.52	1
PIWIL1	16p-Del	0.52	1
ABCA8	17p-Del	0.52	1
ERBB3	16p-Del	0.52	1
FHOD3	Del_18q23	0.52	1
MLC1	Amp_10p15.1	0.52	1
OR6C76	Amp_10p15.1	0.52	1
CABYR	Amp_10p15.1	0.52	1
CEP57	Amp_10p15.1	0.52	1
KDM6A	4p-Del	0.52	1
RHOA	Amp_10p15.1	0.52	1
SPEN	Amp_14q21.1	0.52	1
ASB10	Del_6p25.3	0.521	1
EPDR1	TP53	0.521	1
FAM86B1	Del_6p25.3	0.521	1
GPS2	5p-Amp	0.521	1
GPS2	Amp_11p13	0.521	1
GPS2	Amp_19q13.42	0.521	1
HIST1H3B	5p-Amp	0.521	1
HIST1H3B	Amp_19q13.42	0.521	1
MLL3	ZFP36L1	0.521	1
MLL3	KCNN3	0.521	1
THEM5	Amp_11p13	0.521	1
TP53	FBXO17	0.521	1
TP53	FXYD5	0.521	1
TP53	MKL1	0.521	1
ABCA8	Amp_3q26.32	0.521	1
GPRIN2	Amp_6q21	0.521	1
GPRIN2	Amp_11p13	0.521	1
GPRIN2	Amp_19q13.42	0.521	1
MORN1	Del_6p25.3	0.521	1
PPEF1	5p-Amp	0.521	1
PPEF1	Amp_11p13	0.521	1
PPEF1	Amp_19q13.42	0.521	1
ZNF41	Amp_6q21	0.521	1
ZNF41	Amp_11p13	0.521	1
ZNF41	Amp_19q13.42	0.521	1
C15orf39	Del_6p25.3	0.521	1
FGFR2	5p-Amp	0.521	1
FGFR2	Amp_19q13.42	0.521	1
IRS4	5p-Amp	0.521	1
PSIP1	Del_6p25.3	0.521	1
SLC35B2	Del_6p25.3	0.521	1
TPP2	Del_6p25.3	0.521	1
ZNF687	Amp_6q21	0.521	1
ZNF687	Amp_19q13.42	0.521	1
20p-Amp	4q-Del	0.521	1
C1QTNF5	Amp_6p23	0.522	1
EPDR1	Del_19p13.3	0.522	1
PTHLH	Amp_6p23	0.522	1
SMAD2	Amp_6p23	0.522	1
SMAD4	Amp_6p23	0.522	1
ATXN7L1	Amp_6p23	0.522	1
FBXO17	Del_19p13.3	0.522	1
OR4D10	Amp_6p23	0.522	1
SHISA4	Del_19p13.3	0.522	1
CDC42EP1	Del_19p13.3	0.522	1
TFE3	Amp_6p23	0.522	1
MAP2K4	RB1	0.523	1
MAP2K4	20q-Amp	0.523	1
NCOR1	17q-Amp	0.523	1
NCOR1	Del_5q21.3	0.523	1
RUNX1	Del_13q14.2	0.523	1
Amp_1q44	Del_4p16.3	0.523	1
GATA3	5p-Amp	0.524	1
MAP2K4	1q-Amp	0.524	1
9p-Del	Amp_19q13.42	0.524	1
Amp_19q13.42	Del_10q26.3	0.524	1
ARID1A	18p-Del	0.525	1
CASP8	Del_12q23.1	0.525	1
CASP8	Del_12q24.31	0.525	1
CTCF	Del_3p21.31	0.525	1
HLA-DRB5	Del_3p21.31	0.525	1
HLA-DRB5	Del_9p21.3	0.525	1
MAP2K4	Amp_20q13.2	0.525	1
MYB	Del_12q23.1	0.525	1
MYB	Del_12q24.31	0.525	1
MYB	Del_17q21.31	0.525	1
PIWIL1	Del_3p21.31	0.525	1
RAB42	Del_3p21.31	0.525	1
RAB42	Del_9p21.3	0.525	1
RPGR	Del_3p21.31	0.525	1
TAF1L	Del_9p21.3	0.525	1
CCL13	Del_3p21.31	0.525	1
CCL13	Del_9p21.3	0.525	1
FHOD3	Del_12q23.1	0.525	1
FHOD3	Del_12q24.31	0.525	1
FHOD3	Del_17q21.31	0.525	1
XBP1	Del_3p21.31	0.525	1
XBP1	Del_9p21.3	0.525	1
FRMPD2	Del_12q24.31	0.525	1
RHBG	Del_9p21.3	0.525	1
RIBC1	Del_3p21.31	0.525	1
RIBC1	Del_9p21.3	0.525	1
TGS1	Del_12q23.1	0.525	1
TTPAL	Del_3p21.31	0.525	1
TTPAL	Del_9p21.3	0.525	1
ZBTB7C	Del_3p21.31	0.525	1
ZBTB7C	Del_9p21.3	0.525	1
AARS	16q-Del	0.526	1
CBFB	20q-Amp	0.526	1
FBXW7	Amp_10q22.3	0.526	1
FOXA1	Amp_11q14.1	0.526	1
PIK3R1	Amp_10q22.3	0.526	1
SF3B1	18p-Del	0.526	1
TBX3	Del_17q21.31	0.526	1
VCPIP1	16q-Del	0.526	1
ABCA8	Amp_10q22.3	0.526	1
DNAH12	18p-Del	0.526	1
NFE2L3	16q-Del	0.526	1
WDR52	18p-Del	0.526	1
BCORL1	Amp_10q22.3	0.526	1
EPDR1	Del_17p12	0.527	1
ERBB2	7q-Amp	0.527	1
RUNX1	Del_5q21.3	0.527	1
WSCD2	Del_11p15.5	0.527	1
FXYD5	Del_17p12	0.527	1
CASZ1	Del_11p15.5	0.527	1
CASZ1	Del_14q24.1	0.527	1
CASZ1	Del_19q13.32	0.527	1
DLG1	Del_19q13.32	0.527	1
DOCK11	7q-Amp	0.527	1
MKL1	Del_17p12	0.527	1
MLL4	Del_14q24.1	0.527	1
RBMX	16p-Amp	0.527	1
16p-Amp	Del_1p36.13	0.527	1
7p-Amp	Del_10q26.3	0.527	1
AQP12A	Del_10q23.31	0.528	1
EPDR1	Del_14q24.1	0.528	1
KRAS	Del_10q23.31	0.528	1
RB1	Del_2q37.3	0.528	1
TAF1L	Del_22q13.32	0.528	1
ERBB3	Del_22q13.32	0.528	1
FBXO17	Del_11p15.5	0.528	1
FBXO17	Del_14q24.1	0.528	1
FXYD5	Del_14q24.1	0.528	1
ICOSLG	Del_10q23.31	0.528	1
OR6C76	Del_10q23.31	0.528	1
SHISA4	Del_14q24.1	0.528	1
CABYR	Del_10q23.31	0.528	1
CCDC82	Del_10q23.31	0.528	1
CDC42EP1	Del_11p15.5	0.528	1
CDC42EP1	Del_14q24.1	0.528	1
CEP57	Del_10q23.31	0.528	1
CXCR3	Del_10q23.31	0.528	1
DLG1	Amp_1q44	0.528	1
FRMPD2	Del_16q24.3	0.528	1
MKL1	Del_11p15.5	0.528	1
MKL1	Del_14q24.1	0.528	1
RHOA	Del_10q23.31	0.528	1
TCP11	Del_10q23.31	0.528	1
7p-Amp	Del_6p25.3	0.528	1
16q-Del	4p-Del	0.528	1
Amp_13q34	Del_19q13.32	0.528	1
Amp_15q26.3	Amp_17q12	0.528	1
APC	Del_6q27	0.529	1
CBFB	NF1	0.529	1
FAM20C	Del_16q24.3	0.529	1
PIK3CA	Del_12q24.31	0.529	1
RAB42	Del_16q24.3	0.529	1
TAF1L	20p-Amp	0.529	1
WDR52	Del_6q27	0.529	1
XBP1	Del_16q24.3	0.529	1
CABYR	Amp_1q21.3	0.529	1
CCDC82	Amp_1q21.3	0.529	1
CEP57	Amp_1q21.3	0.529	1
KDM6A	Del_6q27	0.529	1
RHBG	Del_16q24.3	0.529	1
TNRC6B	20p-Amp	0.529	1
7p-Amp	Del_13q14.2	0.529	1
CDH1	1p-Del	0.53	1
CTCF	PTEN	0.53	1
FAM20C	11q-Del	0.53	1
HLA-DRB5	11q-Del	0.53	1
PTEN	TNRC6B	0.53	1
XBP1	11q-Del	0.53	1
ANGPT4	Del_8p23.2	0.53	1
RIBC1	11q-Del	0.53	1
SPEN	Del_11q23.3	0.53	1
TTPAL	11q-Del	0.53	1
ZNF362	11q-Del	0.53	1
Amp_14q21.1	Del_1p22.1	0.53	1
AARS	15q-Del	0.531	1
AARS	9q-Del	0.531	1
AQP12A	Del_10q26.3	0.531	1
ASB10	Del_12p13.1	0.531	1
GATA3	HIST1H2BC	0.531	1
GATA3	KRAS	0.531	1
GATA3	ICOSLG	0.531	1
GATA3	MLC1	0.531	1
GATA3	CABYR	0.531	1
GATA3	CEP57	0.531	1
GATA3	CXCR3	0.531	1
GATA3	TARBP2	0.531	1
HIST1H2BC	Del_10q26.3	0.531	1
KRAS	9p-Del	0.531	1
KRAS	Del_10q26.3	0.531	1
TCP10	Del_12p13.1	0.531	1
TP53	18q-Del	0.531	1
VCPIP1	15q-Del	0.531	1
VCPIP1	9q-Del	0.531	1
VCPIP1	Del_20p13	0.531	1
GRHL2	Del_12p13.1	0.531	1
HLA-C	15q-Del	0.531	1
ICOSLG	Del_10q26.3	0.531	1
MLC1	9p-Del	0.531	1
MORN1	Del_12p13.1	0.531	1
NFE2L3	9q-Del	0.531	1
OR6C76	9p-Del	0.531	1
OR6C76	Del_10q26.3	0.531	1
C15orf39	Del_12p13.1	0.531	1
CABYR	Del_10q26.3	0.531	1
CCDC82	Del_10q26.3	0.531	1
CEP57	Del_10q26.3	0.531	1
CXCR3	9p-Del	0.531	1
EIF4A2	15q-Del	0.531	1
EIF4A2	9q-Del	0.531	1
KCNN3	Del_20p13	0.531	1
RHOA	9p-Del	0.531	1
RHOA	Del_10q26.3	0.531	1
SPEN	Del_12q23.1	0.531	1
TARBP2	9p-Del	0.531	1
TARBP2	Del_10q26.3	0.531	1
TCP11	9p-Del	0.531	1
TCP11	Del_10q26.3	0.531	1
TPP2	Del_12p13.1	0.531	1
7q-Amp	Del_12q23.1	0.531	1
7q-Amp	Del_12q24.31	0.531	1
5q-Del	6q-Del	0.531	1
APC	8p-Amp	0.532	1
CBFB	Del_20p13	0.532	1
FBXW7	Del_13q14.2	0.532	1
PIK3R1	Amp_10p15.1	0.532	1
SF3B1	18q-Del	0.532	1
ABCA8	Amp_10p15.1	0.532	1
ATXN2	Amp_11q14.1	0.532	1
DST	Del_7p22.3	0.532	1
KDM6A	8p-Amp	0.532	1
MED23	20q-Amp	0.532	1
MED23	Amp_11q14.1	0.532	1
MUC6	20q-Amp	0.532	1
MUC6	Amp_11q14.1	0.532	1
RBMX	Amp_11q14.1	0.532	1
SPEN	Del_3p21.31	0.532	1
ZMYM3	20q-Amp	0.532	1
CDKN1B	Del_1p36.13	0.533	1
GATA3	18p-Del	0.533	1
RPGR	Amp_8p11.21	0.533	1
RUNX1	Del_16q24.3	0.533	1
ATXN2	Amp_19p13.12	0.533	1
SPRR2B	22q-Del	0.533	1
MED23	Amp_19p13.12	0.533	1
MUC6	Amp_19p13.12	0.533	1
PCNXL2	4q-Del	0.533	1
RBMX	Amp_19p13.12	0.533	1
APC	16q-Del	0.534	1
HIST1H3B	Amp_13q34	0.534	1
MAP2K4	Del_13q14.2	0.534	1
MLL3	Del_12q23.1	0.534	1
THEM5	Amp_13q34	0.534	1
TP53	Amp_11q14.1	0.534	1
DST	Del_18q23	0.534	1
CASZ1	7p-Amp	0.534	1
DLG1	7p-Amp	0.534	1
FGFR2	Amp_13q34	0.534	1
MLL4	7p-Amp	0.534	1
8p-Amp	16p-Del	0.534	1
Amp_11p13	Del_9q34.2	0.534	1
CTCF	11q-Del	0.535	1
FBXW7	17q-Amp	0.535	1
FBXW7	Amp_4q13.3	0.535	1
HIST1H2BC	4p-Del	0.535	1
KRAS	4p-Del	0.535	1
PIK3R1	17q-Amp	0.535	1
PIWIL1	11q-Del	0.535	1
TCP10	22q-Del	0.535	1
ABCA8	Amp_4q13.3	0.535	1
GYG2	22q-Del	0.535	1
ICOSLG	4p-Del	0.535	1
MORN1	22q-Del	0.535	1
OR6C76	4p-Del	0.535	1
BCORL1	17q-Amp	0.535	1
C15orf39	22q-Del	0.535	1
CABYR	4p-Del	0.535	1
CXCR3	4p-Del	0.535	1
SLC35B2	22q-Del	0.535	1
TNRC6B	11q-Del	0.535	1
7q-Amp	Del_8p23.2	0.535	1
CDH1	14q-Del	0.536	1
CTCF	Del_5q21.3	0.536	1
PIWIL1	Del_5q21.3	0.536	1
RPGR	Del_5q21.3	0.536	1
RUNX1	Amp_13q34	0.536	1
TAF1L	Del_5q21.3	0.536	1
TBX3	13q-Del	0.536	1
TBX3	Amp_6q21	0.536	1
TP53	DST	0.536	1
TP53	PCNXL2	0.536	1
ANKRD12	Del_5q21.3	0.536	1
GPRIN2	Amp_8p11.23	0.536	1
ZNF41	Amp_8p11.23	0.536	1
IRS4	Amp_8p11.23	0.536	1
ZNF687	Amp_8p11.23	0.536	1
16p-Amp	18q-Del	0.536	1
Amp_3p25.1	Del_11q23.3	0.536	1
MAP3K1	20p-Amp	0.537	1
RB1	Del_18q23	0.537	1
NF1	5q-Del	0.537	1
Amp_17q12	Del_9q34.2	0.537	1
APC	6q-Del	0.538	1
FHOD3	Del_9p23	0.538	1
MYH9	6q-Del	0.538	1
FRMPD2	Del_9p23	0.538	1
PCNXL2	13q-Del	0.538	1
CBFB	Del_5q11.2	0.539	1
GATA3	Del_3p21.31	0.539	1
KRAS	18p-Del	0.539	1
MLC1	18p-Del	0.539	1
OR6C76	18p-Del	0.539	1
CABYR	18p-Del	0.539	1
TARBP2	18p-Del	0.539	1
Amp_8p11.21	Del_3p21.31	0.539	1
TCP10	4q-Del	0.54	1
FXYD5	1q-Amp	0.54	1
GYG2	4q-Del	0.54	1
SHISA4	1q-Amp	0.54	1
NF1	6q-Del	0.54	1
PCNXL2	Del_9q21.11	0.54	1
TPP2	4q-Del	0.54	1
USP36	4q-Del	0.54	1
Amp_20q13.2	Del_4q35.1	0.54	1
ASB10	Amp_17q23.1	0.541	1
C1QTNF5	Amp_11q13.3	0.541	1
CDKN1B	5q-Del	0.541	1
FAM86B1	Amp_17q23.1	0.541	1
MYB	Del_22q13.32	0.541	1
PIK3CA	Amp_11q13.3	0.541	1
PTPN22	5q-Del	0.541	1
TAF1L	Amp_20q13.2	0.541	1
TBL1XR1	5q-Del	0.541	1
FHOD3	Del_22q13.32	0.541	1
GRHL2	Amp_17q23.1	0.541	1
MYH9	16p-Del	0.541	1
UBC	Del_22q13.32	0.541	1
ANGPT4	5q-Del	0.541	1
C15orf39	Amp_17q23.1	0.541	1
CASZ1	22q-Del	0.541	1
FRMPD2	Del_22q13.32	0.541	1
KDM6A	16p-Del	0.541	1
MR1	Amp_11q13.3	0.541	1
TGS1	Del_22q13.32	0.541	1
AQP12A	8p-Amp	0.542	1
HIST1H2BC	8p-Amp	0.542	1
KRAS	8p-Amp	0.542	1
KRAS	18q-Del	0.542	1
NCOR1	Amp_6p23	0.542	1
PIK3R1	13q-Del	0.542	1
PTEN	Amp_19p13.12	0.542	1
ABCA8	13q-Del	0.542	1
ICOSLG	8p-Amp	0.542	1
MLC1	8p-Amp	0.542	1
MLC1	18q-Del	0.542	1
OR6C76	8p-Amp	0.542	1
CABYR	8p-Amp	0.542	1
CABYR	18q-Del	0.542	1
CASZ1	Amp_3p25.1	0.542	1
CASZ1	Del_7p22.3	0.542	1
CEP57	8p-Amp	0.542	1
CXCR3	8p-Amp	0.542	1
CXCR3	18q-Del	0.542	1
MLL4	Amp_3p25.1	0.542	1
MLL4	Del_7p22.3	0.542	1
RHOA	8p-Amp	0.542	1
TARBP2	18q-Del	0.542	1
TCP11	8p-Amp	0.542	1
Amp_4q13.3	Amp_6p23	0.542	1
Amp_12q15	Del_4p16.3	0.542	1
FAM86B1	TP53	0.543	1
PIK3R1	Del_10q23.31	0.543	1
RB1	Del_17q21.31	0.543	1
RUNX1	Amp_6p23	0.543	1
TP53	PSIP1	0.543	1
ABCA8	Del_10q23.31	0.543	1
ATXN2	Del_4p16.3	0.543	1
BCORL1	Del_10q23.31	0.543	1
MUC6	Del_4p16.3	0.543	1
ZMYM3	Del_4p16.3	0.543	1
EPDR1	Del_4q35.1	0.544	1
EPDR1	Del_15q13.1	0.544	1
MAP3K1	DST	0.544	1
DST	Amp_12p13.33	0.544	1
FBXO17	Del_4q35.1	0.544	1
FBXO17	Del_15q13.1	0.544	1
SHISA4	Del_4q35.1	0.544	1
AKT2	Del_15q13.1	0.544	1
MKL1	Del_4q35.1	0.544	1
MKL1	Del_15q13.1	0.544	1
5p-Amp	16q-Del	0.544	1
Amp_10q22.3	Amp_11q14.1	0.544	1
ASB10	MAP3K1	0.545	1
MAP3K1	TCP10	0.545	1
MAP3K1	GRHL2	0.545	1
MAP3K1	C15orf39	0.545	1
MAP3K1	TPP2	0.545	1
MYB	Amp_8p11.21	0.545	1
RB1	7q-Amp	0.545	1
TCP10	Del_9q21.11	0.545	1
FHOD3	Amp_8p11.21	0.545	1
GRHL2	Amp_12p13.33	0.545	1
GYG2	Amp_12p13.33	0.545	1
MORN1	Del_9q21.11	0.545	1
UBC	Amp_8p11.21	0.545	1
WDR52	Amp_11q13.3	0.545	1
C15orf39	Amp_12p13.33	0.545	1
FRMPD2	Amp_8p11.21	0.545	1
PSIP1	Del_9q21.11	0.545	1
SLC35B2	Amp_12p13.33	0.545	1
TPP2	Amp_12p13.33	0.545	1
AQP12A	6q-Del	0.546	1
CDH1	MAP2K4	0.546	1
FOXA1	Del_3p21.31	0.546	1
HIST1H2BC	6q-Del	0.546	1
KRAS	6q-Del	0.546	1
PTHLH	Del_8p23.2	0.546	1
RPGR	8p-Del	0.546	1
SMAD4	Del_8p23.2	0.546	1
ANKRD12	8p-Del	0.546	1
CCNL2	Del_8p23.2	0.546	1
OR6C76	6q-Del	0.546	1
ANKRD20A4	Del_8p23.2	0.546	1
CCDC82	6q-Del	0.546	1
RHOA	6q-Del	0.546	1
SPEN	Amp_1q21.3	0.546	1
TARBP2	6q-Del	0.546	1
TNRC6B	8p-Del	0.546	1
1q-Amp	Amp_6q21	0.546	1
6q-Del	Del_19q13.32	0.546	1
ERBB2	Amp_17q12	0.547	1
GATA3	18q-Del	0.547	1
HIST1H3B	Amp_14q21.1	0.547	1
THEM5	1p-Del	0.547	1
GPRIN2	1p-Del	0.547	1
GPRIN2	Amp_14q21.1	0.547	1
ZNF41	1p-Del	0.547	1
DOCK11	Amp_17q12	0.547	1
FGFR2	1p-Del	0.547	1
IRS4	1p-Del	0.547	1
IRS4	Amp_14q21.1	0.547	1
ZNF687	1p-Del	0.547	1
C1QTNF5	Del_2q37.3	0.548	1
CDH1	RBMX	0.548	1
PIWIL1	Amp_6p23	0.548	1
PTHLH	Del_2q37.3	0.548	1
RPGR	Amp_6p23	0.548	1
SMAD2	Del_2q37.3	0.548	1
AKD1	22q-Del	0.548	1
ATXN2	Del_1p22.1	0.548	1
ATXN7L1	Del_2q37.3	0.548	1
ANKRD20A4	Del_2q37.3	0.548	1
MED23	Del_1p22.1	0.548	1
MUC6	Del_1p22.1	0.548	1
PSIP1	Amp_8q24.21	0.548	1
RBMX	Del_1p22.1	0.548	1
SLC35B2	Amp_8q24.21	0.548	1
USP36	Amp_8q24.21	0.548	1
Amp_12p13.33	Del_8p23.2	0.548	1
CDKN1B	Del_3p21.31	0.549	1
FBXW7	GATA3	0.549	1
GATA3	BCORL1	0.549	1
TBL1XR1	Del_9p21.3	0.549	1
ATHL1	Del_9p21.3	0.549	1
BCORL1	Del_10q26.3	0.549	1
DLG1	Amp_17q23.1	0.549	1
PCNXL2	Del_6q15	0.549	1
ASB10	14q-Del	0.55	1
ASB10	Amp_19q12	0.55	1
ASB10	Del_21q11.2	0.55	1
FAM86B1	17q-Del	0.55	1
NCOR1	Amp_17q23.1	0.55	1
PTEN	MYH9	0.55	1
TCP10	14q-Del	0.55	1
TCP10	Amp_19q12	0.55	1
COL6A5	Del_8p23.2	0.55	1
GRHL2	17q-Del	0.55	1
GRHL2	Amp_19q12	0.55	1
GRHL2	Del_21q11.2	0.55	1
GYG2	14q-Del	0.55	1
GYG2	17q-Del	0.55	1
GYG2	Del_21q11.2	0.55	1
MORN1	14q-Del	0.55	1
MORN1	Amp_19q12	0.55	1
C15orf39	14q-Del	0.55	1
C15orf39	Del_21q11.2	0.55	1
KCNN3	13q-Del	0.55	1
MUC6	Amp_10q22.3	0.55	1
PSIP1	17q-Del	0.55	1
PSIP1	Amp_19q12	0.55	1
RBMX	Amp_10q22.3	0.55	1
SLC35B2	17q-Del	0.55	1
SLC35B2	Amp_19q12	0.55	1
TPP2	14q-Del	0.55	1
TPP2	17q-Del	0.55	1
TPP2	Del_21q11.2	0.55	1
7p-Amp	Del_12p13.1	0.55	1
ASB10	Del_17p12	0.551	1
FAM86B1	Del_17p12	0.551	1
GRHL2	Del_17p12	0.551	1
MORN1	Del_17p12	0.551	1
C15orf39	Del_17p12	0.551	1
PSIP1	Del_17p12	0.551	1
SLC35B2	Del_17p12	0.551	1
1p-Del	8p-Del	0.551	1
9q-Del	Amp_1q44	0.551	1
C1QTNF5	11p-Del	0.552	1
C1QTNF5	Del_9q34.2	0.552	1
PIK3CA	Amp_3q26.32	0.552	1
PTPN22	8q-Amp	0.552	1
SMAD2	Del_9q34.2	0.552	1
SMAD4	11p-Del	0.552	1
SMAD4	Del_9q34.2	0.552	1
WSCD2	Del_4q35.1	0.552	1
WSCD2	Del_15q13.1	0.552	1
ZFP36L2	11p-Del	0.552	1
ZFP36L2	Del_9q34.2	0.552	1
ATXN2	8q-Amp	0.552	1
ATXN7L1	11p-Del	0.552	1
OR4D10	11p-Del	0.552	1
OR4D10	Del_9q34.2	0.552	1
ANGPT4	8q-Amp	0.552	1
ANKRD20A4	11p-Del	0.552	1
ANKRD20A4	Del_9q34.2	0.552	1
DLG1	Amp_1q21.3	0.552	1
DLG1	Del_15q13.1	0.552	1
MR1	11p-Del	0.552	1
MR1	Del_9q34.2	0.552	1
TFE3	11p-Del	0.552	1
ZMYM3	8q-Amp	0.552	1
8q-Amp	1q-Del	0.552	1
AARS	Amp_15q26.3	0.553	1
CDKN1B	5p-Amp	0.553	1
CDKN1B	Amp_6q21	0.553	1
CDKN1B	Amp_11p13	0.553	1
CDKN1B	Amp_19q13.42	0.553	1
ERBB2	Del_19p13.3	0.553	1
GATA3	Del_12p13.1	0.553	1
PTPN22	5p-Amp	0.553	1
PTPN22	Amp_6q21	0.553	1
PTPN22	Amp_11p13	0.553	1
RB1	Del_11q23.3	0.553	1
TBL1XR1	5p-Amp	0.553	1
TBL1XR1	Amp_6q21	0.553	1
TBL1XR1	Amp_11p13	0.553	1
TBL1XR1	Amp_19q13.42	0.553	1
VCPIP1	Amp_15q26.3	0.553	1
ZFP36L1	Amp_15q26.3	0.553	1
PRICKLE3	Amp_6q21	0.553	1
ANGPT4	5p-Amp	0.553	1
ATHL1	5p-Amp	0.553	1
ATHL1	Amp_11p13	0.553	1
EIF4A2	Amp_15q26.3	0.553	1
20p-Amp	14q-Del	0.553	1
5p-Amp	1q-Del	0.553	1
17p-Del	Amp_8p11.21	0.553	1
1q-Del	Amp_19q13.42	0.553	1
Amp_1q21.3	Amp_19p13.12	0.553	1
Amp_1q21.3	Del_14q24.1	0.553	1
CASP8	Del_19q13.32	0.554	1
EPDR1	16p-Amp	0.554	1
GPS2	Del_12q23.1	0.554	1
GPS2	Del_12q24.31	0.554	1
HIST1H3B	Del_12q23.1	0.554	1
MYB	Del_19q13.32	0.554	1
THEM5	Del_12q23.1	0.554	1
THEM5	Del_12q24.31	0.554	1
DLX6	16p-Amp	0.554	1
FHOD3	Del_19q13.32	0.554	1
FXYD5	16p-Amp	0.554	1
PPEF1	Del_12q24.31	0.554	1
SHISA4	16p-Amp	0.554	1
FRMPD2	Del_19q13.32	0.554	1
MKL1	16p-Amp	0.554	1
TGS1	Del_19q13.32	0.554	1
16q-Del	Del_21q11.2	0.554	1
1p-Del	Del_19q13.32	0.554	1
AQP12A	8q-Amp	0.555	1
ASB10	Amp_12q15	0.555	1
ASB10	Del_7q36.1	0.555	1
FAM86B1	Amp_12q15	0.555	1
FAM86B1	Del_7q36.1	0.555	1
FBXW7	4p-Del	0.555	1
KRAS	8q-Amp	0.555	1
TBX3	Amp_13q34	0.555	1
CABYR	8q-Amp	0.555	1
CXCR3	8q-Amp	0.555	1
PSIP1	Del_7q36.1	0.555	1
SLC35B2	Del_7q36.1	0.555	1
SPEN	Del_9q34.2	0.555	1
TARBP2	8q-Amp	0.555	1
USP36	Del_7q36.1	0.555	1
20q-Amp	22q-Del	0.555	1
7q-Amp	11p-Del	0.555	1
16q-Del	Amp_3p25.1	0.555	1
Amp_1q44	Amp_13q34	0.555	1
Amp_10q22.3	Del_11q23.3	0.555	1
ARID1A	5p-Amp	0.556	1
RB1	Del_6p25.3	0.556	1
RUNX1	1p-Del	0.556	1
RUNX1	Amp_14q21.1	0.556	1
FHOD3	8p-Del	0.556	1
UBC	8p-Del	0.556	1
NF1	Amp_6q21	0.556	1
PCNXL2	Amp_12q15	0.556	1
AARS	Del_6q15	0.557	1
TCP10	Amp_1q44	0.557	1
DLX6	Amp_11q14.1	0.557	1
DST	Amp_19p13.12	0.557	1
FBXO17	Amp_11q14.1	0.557	1
FXYD5	20q-Amp	0.557	1
GRHL2	Amp_1q44	0.557	1
HLA-C	Del_6q15	0.557	1
HRNR	Del_19q13.32	0.557	1
AKT2	Amp_11q14.1	0.557	1
CDC42EP1	20q-Amp	0.557	1
NBPF9	Amp_11q14.1	0.557	1
8p-Amp	Del_22q13.32	0.557	1
CBFB	11q-Del	0.558	1
ERBB2	4q-Del	0.558	1
NCOR1	MED23	0.558	1
NCOR1	16p-Amp	0.558	1
WSCD2	Amp_19p13.12	0.558	1
CASZ1	Amp_19p13.12	0.558	1
MED23	17q-Amp	0.558	1
MED23	Amp_3q26.32	0.558	1
MED23	Amp_4q13.3	0.558	1
MUC6	Amp_4q13.3	0.558	1
RBMX	Amp_4q13.3	0.558	1
ZMYM3	17q-Amp	0.558	1
ZMYM3	Amp_3q26.32	0.558	1
ZMYM3	Amp_4q13.3	0.558	1
20q-Amp	5q-Del	0.558	1
RUNX1	22q-Del	0.559	1
THEM5	TP53	0.559	1
HRNR	Del_6p25.3	0.559	1
Amp_1p22.3	Amp_14q21.1	0.559	1
CTCF	MAP2K4	0.56	1
FAM86B1	MLL3	0.56	1
FBXW7	18p-Del	0.56	1
MAP2K4	TAF1L	0.56	1
MAP2K4	ANKRD12	0.56	1
MLL3	TCP10	0.56	1
MLL3	C15orf39	0.56	1
MLL3	SLC35B2	0.56	1
PIK3CA	Del_17q21.31	0.56	1
ABCA8	18p-Del	0.56	1
Amp_8p11.23	Amp_17q12	0.56	1
APC	20p-Amp	0.561	1
HIST1H2BC	20p-Amp	0.561	1
KRAS	20p-Amp	0.561	1
MYB	7p-Amp	0.561	1
PIK3R1	Amp_1q44	0.561	1
VCPIP1	Del_16q24.3	0.561	1
DNAH12	20p-Amp	0.561	1
FHOD3	Del_19p13.3	0.561	1
MLC1	20p-Amp	0.561	1
MYH9	20p-Amp	0.561	1
NFE2L3	Del_16q24.3	0.561	1
OR6C76	20p-Amp	0.561	1
CCDC82	20p-Amp	0.561	1
CXCR3	20p-Amp	0.561	1
FRMPD2	7p-Amp	0.561	1
FRMPD2	Del_19p13.3	0.561	1
KCNN3	Del_16q24.3	0.561	1
RHOA	20p-Amp	0.561	1
TGS1	7p-Amp	0.561	1
GATA3	6q-Del	0.562	1
GATA3	Amp_13q34	0.562	1
MAP2K4	Amp_3q26.32	0.562	1
ABCA8	16p-Del	0.562	1
AKD1	7q-Amp	0.562	1
BCORL1	16p-Del	0.562	1
PCNXL2	Del_15q13.1	0.562	1
Amp_11q14.1	Del_15q13.1	0.562	1
SMAD2	Del_22q13.32	0.563	1
CCNL2	Del_22q13.32	0.563	1
DST	Amp_12q15	0.563	1
ANKRD20A4	Del_22q13.32	0.563	1
TFE3	Del_22q13.32	0.563	1
ZMYM3	Amp_17q12	0.563	1
EPDR1	Del_4p16.3	0.564	1
EPDR1	Del_5q11.2	0.564	1
RUNX1	Del_11p15.5	0.564	1
AKD1	11p-Del	0.564	1
ATXN2	Amp_1p22.3	0.564	1
FBXO17	Del_4p16.3	0.564	1
SHISA4	Del_5q11.2	0.564	1
AKT2	Del_4p16.3	0.564	1
AKT2	Del_5q11.2	0.564	1
CDC42EP1	Del_4p16.3	0.564	1
CDC42EP1	Del_5q11.2	0.564	1
MED23	Amp_1p22.3	0.564	1
MKL1	Del_5q11.2	0.564	1
MUC6	Amp_1p22.3	0.564	1
NBPF9	Del_4p16.3	0.564	1
5p-Amp	Amp_19p13.12	0.564	1
Amp_1q44	Del_4q35.1	0.564	1
AQP12A	Del_5q21.3	0.565	1
ERBB2	Del_14q24.1	0.565	1
HIST1H2BC	Del_5q21.3	0.565	1
KRAS	Del_5q21.3	0.565	1
PTEN	6q-Del	0.565	1
OR6C76	Del_5q21.3	0.565	1
CABYR	Del_5q21.3	0.565	1
CXCR3	Del_5q21.3	0.565	1
DOCK11	Del_11p15.5	0.565	1
RHOA	Del_5q21.3	0.565	1
TCP11	Del_5q21.3	0.565	1
16p-Del	Amp_4q13.3	0.565	1
C1QTNF5	Del_6p25.3	0.566	1
CDKN1B	Amp_13q34	0.566	1
FBXW7	18q-Del	0.566	1
GATA3	Del_17p12	0.566	1
MAP3K1	8p-Del	0.566	1
PTHLH	Del_6p25.3	0.566	1
PTPN22	Amp_13q34	0.566	1
SMAD2	Del_6p25.3	0.566	1
SMAD4	Amp_8p11.21	0.566	1
SMAD4	Del_6p25.3	0.566	1
TBL1XR1	Amp_13q34	0.566	1
FHOD3	16q-Del	0.566	1
PRICKLE3	Amp_13q34	0.566	1
ANKRD20A4	Amp_8p11.21	0.566	1
ANKRD20A4	Del_6p25.3	0.566	1
FRMPD2	16q-Del	0.566	1
TFE3	Del_6p25.3	0.566	1
Amp_6q21	Del_9p21.3	0.566	1
APC	Del_3p21.31	0.567	1
APC	Del_5q21.3	0.567	1
CDH1	DLX6	0.567	1
CDH1	AKT2	0.567	1
CDH1	NBPF9	0.567	1
EPDR1	Del_1p22.1	0.567	1
PIK3CA	RUNX1	0.567	1
SF3B1	Del_3p21.31	0.567	1
SF3B1	Del_5q21.3	0.567	1
SF3B1	Del_9p21.3	0.567	1
DLX6	Del_1p22.1	0.567	1
DNAH12	Del_3p21.31	0.567	1
DNAH12	Del_9p21.3	0.567	1
FBXO17	Del_1p22.1	0.567	1
FXYD5	Del_1p22.1	0.567	1
MYH9	Del_3p21.31	0.567	1
SHISA4	Del_1p22.1	0.567	1
CDC42EP1	Del_1p22.1	0.567	1
IRS4	Del_18q23	0.567	1
6q-Del	Amp_11p13	0.567	1
6q-Del	Amp_19q13.42	0.567	1
CASP8	Del_7p22.3	0.568	1
MYB	Del_7p22.3	0.568	1
TBX3	Amp_6p23	0.568	1
FHOD3	Amp_3p25.1	0.568	1
PPEF1	Del_17p12	0.568	1
UBC	Amp_3p25.1	0.568	1
FRMPD2	Amp_3p25.1	0.568	1
IRS4	Del_17p12	0.568	1
ZNF687	Del_17p12	0.568	1
18q-Del	Amp_8p11.21	0.568	1
ARID1A	Amp_20q13.2	0.569	1
ERBB2	Amp_1q21.3	0.569	1
ATXN2	Amp_10p15.1	0.569	1
MED23	Amp_10p15.1	0.569	1
PCNXL2	Amp_8p11.21	0.569	1
1p-Del	Amp_10p15.1	0.569	1
Amp_1q44	Del_19p13.3	0.569	1
CASP8	Del_14q24.1	0.57	1
CDH1	Del_11q23.3	0.57	1
CTCF	HRNR	0.57	1
FAM86B1	15q-Del	0.57	1
HLA-DRB5	Del_18q23	0.57	1
MYB	Del_11p15.5	0.57	1
MYB	Del_14q24.1	0.57	1
RAB42	Del_18q23	0.57	1
TCP10	9q-Del	0.57	1
CCL13	Del_18q23	0.57	1
DLX6	Del_11q23.3	0.57	1
ERBB3	HRNR	0.57	1
GRHL2	Del_20p13	0.57	1
GYG2	Del_20p13	0.57	1
HRNR	1q-Amp	0.57	1
MORN1	15q-Del	0.57	1
MORN1	9q-Del	0.57	1
MORN1	Del_20p13	0.57	1
SHISA4	Del_11q23.3	0.57	1
SPRR2B	Amp_17q12	0.57	1
XBP1	Del_18q23	0.57	1
MKL1	Del_11q23.3	0.57	1
NF1	20p-Amp	0.57	1
PSIP1	15q-Del	0.57	1
PSIP1	9q-Del	0.57	1
RHBG	Del_18q23	0.57	1
RIBC1	Del_18q23	0.57	1
TPP2	15q-Del	0.57	1
TPP2	Del_20p13	0.57	1
USP36	15q-Del	0.57	1
ZNF362	Del_18q23	0.57	1
1q-Amp	1p-Del	0.57	1
Amp_10q22.3	Del_1p22.1	0.57	1
CASZ1	20q-Amp	0.571	1
MLL4	20q-Amp	0.571	1
MLL4	Amp_11q14.1	0.571	1
4p-Del	Amp_1q21.3	0.571	1
Amp_1q21.3	Del_9q34.2	0.571	1
AQP12A	17p-Del	0.572	1
HIST1H2BC	17p-Del	0.572	1
PIK3R1	6q-Del	0.572	1
PTHLH	Amp_20q13.2	0.572	1
MLC1	17p-Del	0.572	1
OR6C76	17p-Del	0.572	1
ANKRD20A4	Amp_20q13.2	0.572	1
CCDC82	17p-Del	0.572	1
CEP57	17p-Del	0.572	1
TFE3	Amp_20q13.2	0.572	1
Amp_6q21	Del_8p23.2	0.572	1
Amp_20q13.2	Del_12q24.31	0.572	1
AQP12A	Amp_6p23	0.573	1
FAM20C	Del_8p23.2	0.573	1
HIST1H2BC	Amp_6p23	0.573	1
HLA-DRB5	Del_17q21.31	0.573	1
KRAS	Amp_6p23	0.573	1
PIK3R1	Del_6q27	0.573	1
RAB42	Del_17q21.31	0.573	1
CCL13	Del_8p23.2	0.573	1
CCL13	Del_17q21.31	0.573	1
OR2T35	Del_17q21.31	0.573	1
OR6C76	Amp_6p23	0.573	1
XBP1	Del_8p23.2	0.573	1
CEP57	Amp_6p23	0.573	1
DOCK11	14q-Del	0.573	1
DOCK11	Del_21q11.2	0.573	1
OXCT2	Del_17q21.31	0.573	1
PAX2	Del_17q21.31	0.573	1
RHOA	Amp_6p23	0.573	1
RIBC1	Del_8p23.2	0.573	1
RIBC1	Del_17q21.31	0.573	1
TTPAL	Del_8p23.2	0.573	1
TTPAL	Del_17q21.31	0.573	1
ZNF362	Del_8p23.2	0.573	1
ZNF362	Del_17q21.31	0.573	1
20q-Amp	Del_20p13	0.573	1
GPS2	Amp_11q13.3	0.574	1
HIST1H3B	Amp_11q13.3	0.574	1
PIK3CA	CASZ1	0.574	1
PIK3CA	DLG1	0.574	1
PTPN22	17p-Del	0.574	1
FBXO17	Amp_3q26.32	0.574	1
FXYD5	Amp_3q26.32	0.574	1
GPRIN2	Amp_11q13.3	0.574	1
HRNR	Amp_8q24.21	0.574	1
HRNR	Del_13q14.2	0.574	1
AKT2	Amp_3q26.32	0.574	1
CASZ1	Amp_10q22.3	0.574	1
DLG1	Amp_10q22.3	0.574	1
MLL4	Amp_10q22.3	0.574	1
PCNXL2	1q-Amp	0.574	1
ZNF687	Amp_11q13.3	0.574	1
AARS	Del_6q27	0.575	1
ARID1A	DOCK11	0.575	1
PTHLH	8p-Del	0.575	1
PTHLH	Del_12p13.1	0.575	1
SMAD2	8p-Del	0.575	1
SMAD2	Del_12p13.1	0.575	1
SMAD4	8p-Del	0.575	1
TBX3	Amp_14q21.1	0.575	1
VCPIP1	Del_6q27	0.575	1
ZFP36L2	Del_12p13.1	0.575	1
CCNL2	8p-Del	0.575	1
OR4D10	Del_12p13.1	0.575	1
ANKRD20A4	8p-Del	0.575	1
MR1	8p-Del	0.575	1
NF1	Amp_13q34	0.575	1
PCNXL2	Del_6q27	0.575	1
SPEN	20q-Amp	0.575	1
TFE3	8p-Del	0.575	1
20p-Amp	Del_15q13.1	0.575	1
8q-Amp	8p-Del	0.575	1
AARS	5q-Del	0.576	1
TAF1L	Amp_8q24.21	0.576	1
VCPIP1	5q-Del	0.576	1
ZFP36L1	5q-Del	0.576	1
NFE2L3	5q-Del	0.576	1
EIF4A2	5q-Del	0.576	1
20p-Amp	5q-Del	0.576	1
5p-Amp	8p-Del	0.576	1
8p-Amp	Amp_3p25.1	0.576	1
8p-Amp	Del_4p16.3	0.576	1
18q-Del	Del_7p22.3	0.576	1
4p-Del	6q-Del	0.576	1
CDH1	Del_1p22.1	0.577	1
EPDR1	Amp_1p22.3	0.577	1
TCP10	Amp_1q21.3	0.577	1
DLX6	16q-Del	0.577	1
FBXO17	16q-Del	0.577	1
FXYD5	Amp_1p22.3	0.577	1
MYH9	11q-Del	0.577	1
SHISA4	16q-Del	0.577	1
SHISA4	Amp_1p22.3	0.577	1
CDC42EP1	Amp_1p22.3	0.577	1
KDM6A	11q-Del	0.577	1
SLC35B2	Amp_1q21.3	0.577	1
Amp_3q26.32	Amp_12q15	0.577	1
ACTL6B	Amp_14q21.1	0.578	1
CDKN1B	1p-Del	0.578	1
CDKN1B	Amp_14q21.1	0.578	1
PIK3CA	PRICKLE3	0.578	1
PTEN	Amp_8p11.21	0.578	1
PTPN22	1p-Del	0.578	1
TBL1XR1	1p-Del	0.578	1
TBL1XR1	Amp_14q21.1	0.578	1
ATXN2	17p-Del	0.578	1
PRICKLE3	Amp_14q21.1	0.578	1
ANGPT4	1p-Del	0.578	1
ANGPT4	Amp_14q21.1	0.578	1
ATHL1	1p-Del	0.578	1
RBMX	17p-Del	0.578	1
1q-Del	Amp_14q21.1	0.578	1
Amp_1q21.3	Amp_17q23.1	0.578	1
MAP2K4	SF3B1	0.579	1
MAP2K4	DNAH12	0.579	1
MAP2K4	MYH9	0.579	1
MAP2K4	WDR52	0.579	1
PIK3CA	18p-Del	0.579	1
SF3B1	Del_22q13.32	0.579	1
TBX3	Del_19p13.3	0.579	1
DST	18q-Del	0.579	1
DST	Del_1p36.13	0.579	1
PCNXL2	9q-Del	0.579	1
17p-Del	Amp_12q15	0.579	1
APC	Amp_6p23	0.58	1
AQP12A	Del_13q14.2	0.58	1
EPDR1	Amp_10p15.1	0.58	1
MAP2K4	Del_8p23.2	0.58	1
PTEN	17q-Amp	0.58	1
SF3B1	Amp_6p23	0.58	1
ATXN2	Del_10q23.31	0.58	1
FBXO17	Amp_10p15.1	0.58	1
MYH9	Amp_6p23	0.58	1
SHISA4	Amp_10p15.1	0.58	1
AKT2	Amp_10p15.1	0.58	1
CABYR	Del_13q14.2	0.58	1
CCDC82	Del_13q14.2	0.58	1
CXCR3	Del_13q14.2	0.58	1
MED23	Del_10q23.31	0.58	1
MKL1	Amp_10p15.1	0.58	1
MUC6	Del_10q23.31	0.58	1
NBPF9	Amp_10p15.1	0.58	1
1q-Amp	13q-Del	0.58	1
Amp_19p13.12	Del_10q23.31	0.58	1
Del_5q11.2	Del_6q15	0.58	1
CTCF	7q-Amp	0.581	1
HLA-DRB5	Del_9p23	0.581	1
PIK3CA	Del_1p22.1	0.581	1
PIWIL1	7q-Amp	0.581	1
RAB42	Del_9p23	0.581	1
TAF1L	7q-Amp	0.581	1
ANKRD12	7q-Amp	0.581	1
CCL13	Del_9p23	0.581	1
ERBB3	7q-Amp	0.581	1
XBP1	Del_9p23	0.581	1
CASZ1	Del_5q11.2	0.581	1
DLG1	Del_4p16.3	0.581	1
RHBG	Del_9p23	0.581	1
RIBC1	Del_9p23	0.581	1
TTPAL	Del_9p23	0.581	1
ZBTB7C	Del_9p23	0.581	1
7q-Amp	Del_6p25.3	0.581	1
7q-Amp	Del_22q13.32	0.581	1
Amp_12q15	Del_5q21.3	0.581	1
GPS2	Del_19q13.32	0.582	1
WSCD2	Amp_4q13.3	0.582	1
GPRIN2	Del_19q13.32	0.582	1
CASZ1	Amp_4q13.3	0.582	1
DLG1	17q-Amp	0.582	1
DLG1	Amp_4q13.3	0.582	1
FGFR2	Del_19q13.32	0.582	1
IRS4	Del_19q13.32	0.582	1
ZNF687	Del_19q13.32	0.582	1
CASP8	Amp_19p13.12	0.583	1
MAP3K1	7p-Amp	0.583	1
MYB	Amp_19p13.12	0.583	1
SF3B1	Amp_8p11.21	0.583	1
SPRR2B	13q-Del	0.583	1
FRMPD2	Amp_19p13.12	0.583	1
KDM6A	Amp_8p11.21	0.583	1
PCNXL2	8p-Del	0.583	1
RBMX	Del_16q24.3	0.583	1
RBMX	Del_17p12	0.583	1
TGS1	Amp_19p13.12	0.583	1
ZMYM3	Del_17p12	0.583	1
8q-Amp	Del_9q34.2	0.583	1
ACTL6B	Del_13q14.2	0.584	1
CBFB	Amp_8p11.23	0.584	1
FBXW7	Del_8p23.2	0.584	1
GPS2	Del_9p23	0.584	1
HIST1H3B	Del_9p23	0.584	1
NCOR1	Amp_1q21.3	0.584	1
NCOR1	Del_5q11.2	0.584	1
PTPN22	Del_13q14.2	0.584	1
TBL1XR1	Del_13q14.2	0.584	1
TP53	TNRC6B	0.584	1
ZFP36L2	4q-Del	0.584	1
ABCA8	Del_8p23.2	0.584	1
ATXN2	16p-Del	0.584	1
ATXN7L1	4q-Del	0.584	1
GPRIN2	Del_9p23	0.584	1
OR4D10	4q-Del	0.584	1
PPEF1	Del_9p23	0.584	1
PRICKLE3	Del_13q14.2	0.584	1
ZNF687	Del_9p23	0.584	1
1q-Amp	8q-Amp	0.584	1
13q-Del	Amp_6q21	0.584	1
CDKN1B	Del_12q23.1	0.585	1
GATA3	MUC6	0.585	1
RB1	4q-Del	0.585	1
RUNX1	AKD1	0.585	1
ATXN2	Del_10q26.3	0.585	1
PRICKLE3	Del_12q24.31	0.585	1
ANGPT4	Del_12q23.1	0.585	1
ANGPT4	Del_12q24.31	0.585	1
ATHL1	Del_12q23.1	0.585	1
ATHL1	Del_12q24.31	0.585	1
MED23	Del_10q26.3	0.585	1
RBMX	9p-Del	0.585	1
ZMYM3	9p-Del	0.585	1
ZMYM3	Del_10q26.3	0.585	1
1q-Del	Del_12q24.31	0.585	1
CDH1	MLL4	0.586	1
FOXA1	Del_10q23.31	0.586	1
PIWIL1	Del_2q37.3	0.586	1
RPGR	Del_2q37.3	0.586	1
TAF1L	Del_2q37.3	0.586	1
COL6A5	8p-Amp	0.586	1
5q-Del	Amp_19q13.42	0.586	1
Amp_17q12	Del_9q21.11	0.586	1
AARS	5p-Amp	0.587	1
AARS	Amp_6q21	0.587	1
AARS	Amp_19q13.42	0.587	1
C1QTNF5	PIK3CA	0.587	1
EPDR1	Del_10q23.31	0.587	1
PIK3CA	PTHLH	0.587	1
PIK3CA	ATXN7L1	0.587	1
VCPIP1	Amp_11p13	0.587	1
ZFP36L1	Amp_11p13	0.587	1
ABCA8	Amp_1q21.3	0.587	1
DLX6	Del_10q23.31	0.587	1
FBXO17	Del_10q23.31	0.587	1
FXYD5	Del_10q23.31	0.587	1
GPRIN2	1q-Amp	0.587	1
HLA-C	5p-Amp	0.587	1
HLA-C	Amp_11p13	0.587	1
NFE2L3	5p-Amp	0.587	1
NFE2L3	Amp_6q21	0.587	1
PPEF1	1q-Amp	0.587	1
CDC42EP1	Del_10q23.31	0.587	1
EIF4A2	5p-Amp	0.587	1
EIF4A2	Amp_6q21	0.587	1
EIF4A2	Amp_11p13	0.587	1
EIF4A2	Amp_19q13.42	0.587	1
KCNN3	5p-Amp	0.587	1
KCNN3	Amp_11p13	0.587	1
MKL1	Del_10q23.31	0.587	1
20q-Amp	Del_22q13.32	0.587	1
17p-Del	Amp_14q21.1	0.587	1
C1QTNF5	MAP3K1	0.588	1
C1QTNF5	Amp_12p13.33	0.588	1
MAP3K1	PTHLH	0.588	1
MAP3K1	SMAD2	0.588	1
MAP3K1	OR4D10	0.588	1
MAP3K1	ANKRD20A4	0.588	1
MAP3K1	TFE3	0.588	1
PTHLH	Amp_12p13.33	0.588	1
SMAD2	Amp_12p13.33	0.588	1
SMAD2	Del_9q21.11	0.588	1
SMAD4	Amp_12p13.33	0.588	1
SMAD4	Del_9q21.11	0.588	1
ZFP36L2	Amp_12p13.33	0.588	1
OR4D10	Amp_12p13.33	0.588	1
OR4D10	Del_9q21.11	0.588	1
SPRR2B	Del_6q15	0.588	1
ANKRD20A4	Del_9q21.11	0.588	1
MR1	Amp_12p13.33	0.588	1
MR1	Del_9q21.11	0.588	1
SDC1	Del_6q15	0.588	1
TFE3	Amp_12p13.33	0.588	1
Amp_1p22.3	Del_7q36.1	0.588	1
Amp_17q12	Del_4q35.1	0.588	1
Del_7q36.1	Del_19q13.32	0.588	1
AARS	Del_1p36.13	0.589	1
GATA3	Amp_19p13.12	0.589	1
HIST1H3B	7p-Amp	0.589	1
MAP2K4	Del_18q23	0.589	1
TP53	11p-Del	0.589	1
VCPIP1	Del_1p36.13	0.589	1
GPRIN2	7p-Amp	0.589	1
HLA-C	Del_1p36.13	0.589	1
PPEF1	7p-Amp	0.589	1
ZNF41	7p-Amp	0.589	1
EIF4A2	Del_1p36.13	0.589	1
FGFR2	7p-Amp	0.589	1
MUC6	13q-Del	0.589	1
ZMYM3	13q-Del	0.589	1
7q-Amp	Del_5q11.2	0.589	1
EPDR1	GATA3	0.59	1
EPDR1	Del_10q26.3	0.59	1
GATA3	SHISA4	0.59	1
GATA3	CDC42EP1	0.59	1
GATA3	NBPF9	0.59	1
SF3B1	HRNR	0.59	1
TAF1L	Amp_1q44	0.59	1
ATXN2	4p-Del	0.59	1
COL6A5	1q-Amp	0.59	1
FBXO17	9p-Del	0.59	1
FXYD5	9p-Del	0.59	1
FXYD5	Del_10q26.3	0.59	1
HRNR	MYH9	0.59	1
CDC42EP1	9p-Del	0.59	1
CDC42EP1	Del_10q26.3	0.59	1
MKL1	9p-Del	0.59	1
MKL1	Del_10q26.3	0.59	1
ZMYM3	4p-Del	0.59	1
8p-Amp	Del_12p13.1	0.59	1
11p-Del	Amp_10q22.3	0.59	1
22q-Del	Amp_1q21.3	0.59	1
APC	Amp_20q13.2	0.591	1
ARID1A	RB1	0.591	1
ASB10	Amp_15q26.3	0.591	1
SF3B1	Amp_20q13.2	0.591	1
TCP10	Amp_15q26.3	0.591	1
GYG2	Amp_15q26.3	0.591	1
MORN1	Amp_15q26.3	0.591	1
PSIP1	Amp_15q26.3	0.591	1
SLC35B2	Amp_15q26.3	0.591	1
TPP2	Amp_15q26.3	0.591	1
Amp_10p15.1	Del_17q21.31	0.591	1
ASB10	Amp_17q12	0.592	1
RB1	Amp_12p13.33	0.592	1
RUNX1	Del_2q37.3	0.592	1
GRHL2	Amp_17q12	0.592	1
C15orf39	Amp_17q12	0.592	1
NF1	Amp_6p23	0.592	1
USP36	Amp_17q12	0.592	1
17q-Amp	Del_1p22.1	0.592	1
Amp_4q13.3	Del_1p22.1	0.592	1
Amp_13q34	Del_11q23.3	0.592	1
ARID1A	17p-Del	0.593	1
C1QTNF5	14q-Del	0.593	1
CTCF	11p-Del	0.593	1
CTCF	Del_9q34.2	0.593	1
MAP2K4	Del_21q11.2	0.593	1
PIWIL1	11p-Del	0.593	1
PTEN	ATXN2	0.593	1
PTEN	MED23	0.593	1
PTEN	MUC6	0.593	1
PTHLH	14q-Del	0.593	1
PTHLH	Amp_19q12	0.593	1
PTHLH	Del_21q11.2	0.593	1
SMAD2	14q-Del	0.593	1
SMAD2	Amp_19q12	0.593	1
SMAD4	14q-Del	0.593	1
SMAD4	Amp_19q12	0.593	1
TAF1L	11p-Del	0.593	1
TAF1L	Del_9q34.2	0.593	1
ZFP36L2	14q-Del	0.593	1
ZFP36L2	17q-Del	0.593	1
ZFP36L2	Amp_19q12	0.593	1
ZFP36L2	Del_21q11.2	0.593	1
ANKRD12	Del_9q34.2	0.593	1
ATXN7L1	14q-Del	0.593	1
ATXN7L1	17q-Del	0.593	1
ATXN7L1	Del_21q11.2	0.593	1
CCNL2	17q-Del	0.593	1
CCNL2	Del_21q11.2	0.593	1
COL6A5	6q-Del	0.593	1
DST	15q-Del	0.593	1
ERBB3	Del_9q34.2	0.593	1
OR4D10	14q-Del	0.593	1
OR4D10	17q-Del	0.593	1
UBC	Del_15q13.1	0.593	1
ANKRD20A4	14q-Del	0.593	1
ANKRD20A4	17q-Del	0.593	1
ANKRD20A4	Amp_19q12	0.593	1
ANKRD20A4	Del_21q11.2	0.593	1
MR1	14q-Del	0.593	1
MR1	Amp_19q12	0.593	1
MR1	Del_21q11.2	0.593	1
TFE3	14q-Del	0.593	1
TFE3	Amp_19q12	0.593	1
5p-Amp	Del_12p13.1	0.593	1
Amp_17q12	Del_5q11.2	0.593	1
Amp_19q13.42	Del_12p13.1	0.593	1
ARID1A	1p-Del	0.594	1
ARID1A	Amp_14q21.1	0.594	1
CTCF	22q-Del	0.594	1
EPDR1	4p-Del	0.594	1
RPGR	22q-Del	0.594	1
TAF1L	22q-Del	0.594	1
FBXO17	4p-Del	0.594	1
AKT2	4p-Del	0.594	1
CDC42EP1	4p-Del	0.594	1
NBPF9	4p-Del	0.594	1
AQP12A	Amp_8p11.23	0.595	1
ERBB2	Del_15q13.1	0.595	1
FAM20C	Del_19p13.3	0.595	1
HLA-DRB5	Del_19p13.3	0.595	1
PIK3R1	20p-Amp	0.595	1
RAB42	Del_19p13.3	0.595	1
RUNX1	Del_3p21.31	0.595	1
AKD1	Del_9p23	0.595	1
CCL13	Del_19p13.3	0.595	1
MLC1	Amp_8p11.23	0.595	1
CCDC82	Amp_8p11.23	0.595	1
CXCR3	Amp_8p11.23	0.595	1
RHBG	Del_19p13.3	0.595	1
RIBC1	Del_19p13.3	0.595	1
SPEN	Amp_17q12	0.595	1
TTPAL	Del_19p13.3	0.595	1
ZBTB7C	Del_19p13.3	0.595	1
GPS2	Amp_3p25.1	0.596	1
GPS2	Del_7p22.3	0.596	1
HIST1H3B	Amp_3p25.1	0.596	1
MAP2K4	Del_17q21.31	0.596	1
THEM5	Del_7p22.3	0.596	1
ATXN2	18p-Del	0.596	1
DNAH12	8p-Del	0.596	1
GPRIN2	Del_7p22.3	0.596	1
PPEF1	Del_7p22.3	0.596	1
WDR52	8p-Del	0.596	1
ZNF41	Del_7p22.3	0.596	1
CASZ1	Amp_3q26.32	0.596	1
FGFR2	Del_7p22.3	0.596	1
IRS4	Amp_3p25.1	0.596	1
IRS4	Del_7p22.3	0.596	1
MLL4	Amp_3q26.32	0.596	1
ZNF687	Del_7p22.3	0.596	1
17q-Amp	Del_22q13.32	0.596	1
5p-Amp	Amp_10q22.3	0.596	1
Amp_4q13.3	Del_18q23	0.596	1
Amp_10q22.3	Amp_11p13	0.596	1
AQP12A	Del_2q37.3	0.597	1
EPDR1	18p-Del	0.597	1
HIST1H2BC	Del_2q37.3	0.597	1
KRAS	Del_2q37.3	0.597	1
MYB	22q-Del	0.597	1
DLX6	18p-Del	0.597	1
FBXO17	18p-Del	0.597	1
FHOD3	22q-Del	0.597	1
ICOSLG	Del_2q37.3	0.597	1
MLC1	Del_2q37.3	0.597	1
OR6C76	Del_2q37.3	0.597	1
SHISA4	18p-Del	0.597	1
UBC	22q-Del	0.597	1
CABYR	Del_2q37.3	0.597	1
CDC42EP1	18p-Del	0.597	1
CXCR3	Del_2q37.3	0.597	1
SPEN	Del_1p22.1	0.597	1
TARBP2	Del_2q37.3	0.597	1
TCP11	Del_2q37.3	0.597	1
TGS1	22q-Del	0.597	1
7q-Amp	17p-Del	0.597	1
8q-Amp	Del_4q35.1	0.597	1
C1QTNF5	Amp_12q15	0.598	1
C1QTNF5	Del_7q36.1	0.598	1
CBFB	PCNXL2	0.598	1
PTHLH	Del_7q36.1	0.598	1
SMAD2	Amp_12q15	0.598	1
SMAD2	Del_7q36.1	0.598	1
ATXN7L1	Del_7q36.1	0.598	1
CCNL2	Amp_12q15	0.598	1
OR4D10	Amp_12q15	0.598	1
OR4D10	Del_7q36.1	0.598	1
ANKRD20A4	Del_7q36.1	0.598	1
MR1	Amp_12q15	0.598	1
MUC6	Del_6q15	0.598	1
TFE3	Amp_12q15	0.598	1
AARS	Amp_13q34	0.599	1
CASP8	Amp_10q22.3	0.599	1
MAP3K1	Amp_12p13.33	0.599	1
MLL3	Del_19q13.32	0.599	1
MYB	Amp_10q22.3	0.599	1
PIK3R1	Amp_11q13.3	0.599	1
RB1	Amp_19q12	0.599	1
RB1	Del_21q11.2	0.599	1
RUNX1	Del_15q13.1	0.599	1
TP53	Amp_12q15	0.599	1
VCPIP1	Amp_13q34	0.599	1
ZFP36L1	Amp_13q34	0.599	1
HRNR	13q-Del	0.599	1
SPRR2B	Del_6q27	0.599	1
UBC	Amp_10q22.3	0.599	1
EIF4A2	Amp_13q34	0.599	1
KCNN3	Amp_13q34	0.599	1
SDC1	Del_6q27	0.599	1
20q-Amp	Del_17q21.31	0.599	1
FAM20C	Del_11p15.5	0.6	1
FAM20C	Del_14q24.1	0.6	1
FBXW7	Del_5q21.3	0.6	1
FOXA1	5q-Del	0.6	1
HLA-DRB5	Del_11p15.5	0.6	1
HLA-DRB5	Del_14q24.1	0.6	1
MAP2K4	PIK3R1	0.6	1
MAP2K4	ABCA8	0.6	1
MAP2K4	BCORL1	0.6	1
PIK3R1	Del_5q21.3	0.6	1
RAB42	Del_11p15.5	0.6	1
RAB42	Del_14q24.1	0.6	1
RUNX1	11p-Del	0.6	1
ABCA8	Del_5q21.3	0.6	1
CCL13	Del_11p15.5	0.6	1
DNAH12	7q-Amp	0.6	1
MYH9	7q-Amp	0.6	1
OR2T35	Del_11p15.5	0.6	1
OR2T35	Del_14q24.1	0.6	1
XBP1	Del_11p15.5	0.6	1
XBP1	Del_14q24.1	0.6	1
KDM6A	7q-Amp	0.6	1
OXCT2	Del_11p15.5	0.6	1
RHBG	Del_11p15.5	0.6	1
RHBG	Del_14q24.1	0.6	1
RIBC1	Del_11p15.5	0.6	1
RIBC1	Del_14q24.1	0.6	1
TTPAL	Del_11p15.5	0.6	1
TTPAL	Del_14q24.1	0.6	1
ZBTB7C	Del_14q24.1	0.6	1
20p-Amp	Del_5q21.3	0.6	1
9p-Del	Amp_14q21.1	0.6	1
EPDR1	8p-Amp	0.601	1
HIST1H2BC	Del_9q34.2	0.601	1
KRAS	11p-Del	0.601	1
KRAS	Del_9q34.2	0.601	1
THEM5	Del_22q13.32	0.601	1
ATXN2	8p-Amp	0.601	1
DLX6	18q-Del	0.601	1
FBXO17	8p-Amp	0.601	1
FBXO17	18q-Del	0.601	1
FHOD3	Del_8p23.2	0.601	1
FXYD5	8p-Amp	0.601	1
ICOSLG	Del_9q34.2	0.601	1
MLC1	Del_9q34.2	0.601	1
OR6C76	11p-Del	0.601	1
OR6C76	Del_9q34.2	0.601	1
PPEF1	Del_22q13.32	0.601	1
SHISA4	18q-Del	0.601	1
UBC	Del_8p23.2	0.601	1
CABYR	11p-Del	0.601	1
CABYR	Del_9q34.2	0.601	1
CDC42EP1	8p-Amp	0.601	1
CDC42EP1	18q-Del	0.601	1
CEP57	11p-Del	0.601	1
CEP57	Del_9q34.2	0.601	1
CXCR3	11p-Del	0.601	1
CXCR3	Del_9q34.2	0.601	1
MED23	8p-Amp	0.601	1
MUC6	18q-Del	0.601	1
RHOA	11p-Del	0.601	1
RHOA	Del_9q34.2	0.601	1
TARBP2	11p-Del	0.601	1
TARBP2	Del_9q34.2	0.601	1
TCP11	11p-Del	0.601	1
TCP11	Del_9q34.2	0.601	1
MLL3	ZFP36L2	0.602	1
MLL3	ANKRD20A4	0.602	1
HRNR	Amp_10p15.1	0.602	1
Amp_4q13.3	Amp_8p11.21	0.602	1
ERBB2	15q-Del	0.603	1
ERBB2	9q-Del	0.603	1
MAP2K4	Amp_12q15	0.603	1
PIWIL1	RUNX1	0.603	1
RPGR	RUNX1	0.603	1
RPGR	Amp_17q23.1	0.603	1
TBL1XR1	Amp_8p11.23	0.603	1
HRNR	Amp_19p13.12	0.603	1
1q-Amp	Del_9q21.11	0.603	1
AARS	Del_3p21.31	0.604	1
AARS	Del_9p21.3	0.604	1
CASP8	Amp_17q23.1	0.604	1
EPDR1	6q-Del	0.604	1
FAM86B1	Del_11q23.3	0.604	1
MAP3K1	HRNR	0.604	1
NCOR1	Del_17q21.31	0.604	1
TCP10	Del_11q23.3	0.604	1
VCPIP1	Del_3p21.31	0.604	1
VCPIP1	Del_9p21.3	0.604	1
ZFP36L1	Del_3p21.31	0.604	1
ATXN2	1q-Amp	0.604	1
FBXO17	6q-Del	0.604	1
FHOD3	Amp_17q23.1	0.604	1
FXYD5	6q-Del	0.604	1
GYG2	Del_11q23.3	0.604	1
HLA-C	Del_3p21.31	0.604	1
HLA-C	Del_9p21.3	0.604	1
NFE2L3	Del_9p21.3	0.604	1
SHISA4	6q-Del	0.604	1
UBC	Amp_17q23.1	0.604	1
AKT2	6q-Del	0.604	1
EIF4A2	Del_9p21.3	0.604	1
MKL1	6q-Del	0.604	1
NBPF9	6q-Del	0.604	1
PCNXL2	8q-Amp	0.604	1
16q-Del	Del_19p13.3	0.604	1
Amp_19q13.42	Del_9p23	0.604	1
CDH1	6q-Del	0.605	1
GPS2	Del_19p13.3	0.605	1
PIK3CA	RAB42	0.605	1
THEM5	Del_19p13.3	0.605	1
GPRIN2	Amp_8p11.21	0.605	1
FGFR2	Del_19p13.3	0.605	1
IRS4	Amp_8p11.21	0.605	1
7p-Amp	Amp_12q15	0.605	1
Amp_3q26.32	Del_1p22.1	0.605	1
C1QTNF5	22q-Del	0.606	1
CDH1	PCNXL2	0.606	1
SMAD2	22q-Del	0.606	1
ANKRD20A4	22q-Del	0.606	1
Amp_17q23.1	Del_14q24.1	0.606	1
CASP8	Amp_4q13.3	0.607	1
MYB	17q-Amp	0.607	1
MYB	Amp_4q13.3	0.607	1
NCOR1	UBC	0.607	1
TBX3	Amp_17q23.1	0.607	1
WSCD2	Amp_10p15.1	0.607	1
ATXN2	6q-Del	0.607	1
FHOD3	Amp_4q13.3	0.607	1
UBC	Amp_4q13.3	0.607	1
CASZ1	Amp_10p15.1	0.607	1
DLG1	Amp_10p15.1	0.607	1
DOCK11	Del_17p12	0.607	1
FRMPD2	16p-Amp	0.607	1
FRMPD2	Amp_4q13.3	0.607	1
MLL4	16p-Del	0.607	1
TGS1	Amp_4q13.3	0.607	1
ZMYM3	6q-Del	0.607	1
20p-Amp	Del_17p12	0.607	1
Amp_12p13.33	Del_11q23.3	0.607	1
Amp_20q13.2	Del_7q36.1	0.607	1
SDC1	Del_1p36.13	0.608	1
8q-Amp	Del_12p13.1	0.608	1
ERBB2	Del_22q13.32	0.609	1
RUNX1	Del_19q13.32	0.609	1
MLC1	Del_16q24.3	0.609	1
DOCK11	Del_22q13.32	0.609	1
TARBP2	Del_16q24.3	0.609	1
TCP11	Del_16q24.3	0.609	1
17q-Amp	Del_9q34.2	0.609	1
11p-Del	Amp_4q13.3	0.609	1
11q-Del	Amp_1p22.3	0.609	1
Amp_1q21.3	Del_11q23.3	0.609	1
Amp_17q23.1	Del_7q36.1	0.609	1
Del_16q24.3	Del_21q11.2	0.609	1
FBXW7	Del_3p21.31	0.61	1
GPS2	Amp_19p13.12	0.61	1
THEM5	Amp_19p13.12	0.61	1
ABCA8	HRNR	0.61	1
GPRIN2	Amp_19p13.12	0.61	1
HRNR	BCORL1	0.61	1
ZNF41	Amp_19p13.12	0.61	1
ZNF687	Amp_19p13.12	0.61	1
AARS	11q-Del	0.611	1
AARS	1p-Del	0.611	1
AARS	Amp_14q21.1	0.611	1
CDKN1B	Del_19q13.32	0.611	1
PTPN22	Del_19q13.32	0.611	1
TAF1L	Del_18q23	0.611	1
TBL1XR1	Del_19q13.32	0.611	1
VCPIP1	Amp_14q21.1	0.611	1
ZFP36L1	11q-Del	0.611	1
ZFP36L1	Amp_14q21.1	0.611	1
HLA-C	1p-Del	0.611	1
NFE2L3	1p-Del	0.611	1
PRICKLE3	Del_19q13.32	0.611	1
ANGPT4	Del_19q13.32	0.611	1
EIF4A2	11q-Del	0.611	1
EIF4A2	1p-Del	0.611	1
EIF4A2	Amp_14q21.1	0.611	1
KCNN3	Amp_14q21.1	0.611	1
Amp_8p11.21	Del_11p15.5	0.611	1
ASB10	13q-Del	0.612	1
C1QTNF5	9q-Del	0.612	1
CTCF	Del_6p25.3	0.612	1
FBXW7	Amp_6p23	0.612	1
MAP2K4	Amp_10q22.3	0.612	1
MAP2K4	Del_6q27	0.612	1
MYB	20q-Amp	0.612	1
NCOR1	Amp_11p13	0.612	1
PIK3R1	Amp_6p23	0.612	1
PIWIL1	Del_6p25.3	0.612	1
PTHLH	Amp_17q23.1	0.612	1
SMAD2	9q-Del	0.612	1
SMAD4	15q-Del	0.612	1
SMAD4	9q-Del	0.612	1
TAF1L	Del_6p25.3	0.612	1
ZFP36L2	15q-Del	0.612	1
ZFP36L2	9q-Del	0.612	1
ZFP36L2	Amp_17q23.1	0.612	1
ZFP36L2	Del_20p13	0.612	1
ATXN2	Amp_8p11.23	0.612	1
ATXN7L1	15q-Del	0.612	1
CCNL2	15q-Del	0.612	1
CCNL2	Amp_17q23.1	0.612	1
FHOD3	Amp_11q14.1	0.612	1
GRHL2	5q-Del	0.612	1
GYG2	5q-Del	0.612	1
MORN1	16q-Del	0.612	1
MORN1	5q-Del	0.612	1
OR4D10	15q-Del	0.612	1
OR4D10	Amp_17q23.1	0.612	1
UBC	Amp_11q14.1	0.612	1
ANKRD20A4	15q-Del	0.612	1
ANKRD20A4	9q-Del	0.612	1
ANKRD20A4	Amp_17q23.1	0.612	1
ANKRD20A4	Del_20p13	0.612	1
C15orf39	13q-Del	0.612	1
MED23	Amp_8p11.23	0.612	1
MR1	15q-Del	0.612	1
MR1	9q-Del	0.612	1
MR1	Del_20p13	0.612	1
PSIP1	5q-Del	0.612	1
SLC35B2	5q-Del	0.612	1
TFE3	15q-Del	0.612	1
TGS1	Amp_8q24.21	0.612	1
TPP2	13q-Del	0.612	1
ZNF687	Amp_20q13.2	0.612	1
17q-Amp	5p-Amp	0.612	1
FOXA1	DOCK11	0.613	1
MAP2K4	16q-Del	0.613	1
WSCD2	Amp_17q12	0.613	1
DLG1	Amp_17q12	0.613	1
Amp_1p22.3	Del_22q13.32	0.613	1
Amp_19p13.12	Del_11q23.3	0.613	1
ERBB2	Del_6q27	0.614	1
GPS2	Del_14q24.1	0.614	1
HIST1H2BC	Del_6p25.3	0.614	1
HIST1H3B	Del_11p15.5	0.614	1
KRAS	Del_6p25.3	0.614	1
TBX3	ERBB3	0.614	1
THEM5	Del_11p15.5	0.614	1
WSCD2	8q-Amp	0.614	1
GPRIN2	Del_11p15.5	0.614	1
ICOSLG	Del_6p25.3	0.614	1
OR6C76	Del_6p25.3	0.614	1
PPEF1	Del_14q24.1	0.614	1
CABYR	Del_6p25.3	0.614	1
CCDC82	Del_6p25.3	0.614	1
CEP57	Del_6p25.3	0.614	1
FGFR2	Del_14q24.1	0.614	1
RHOA	Del_6p25.3	0.614	1
TARBP2	Del_6p25.3	0.614	1
5p-Amp	Del_13q14.2	0.614	1
18p-Del	Amp_15q26.3	0.614	1
FAM20C	Del_4q35.1	0.615	1
HLA-DRB5	Del_4q35.1	0.615	1
HLA-DRB5	Del_15q13.1	0.615	1
NCOR1	Amp_20q13.2	0.615	1
PTEN	Amp_15q26.3	0.615	1
RAB42	Del_4q35.1	0.615	1
RAB42	Del_15q13.1	0.615	1
RB1	Amp_1q44	0.615	1
CCL13	Del_15q13.1	0.615	1
COL6A5	Amp_13q34	0.615	1
GPRIN2	8p-Del	0.615	1
OR2T35	Del_4q35.1	0.615	1
OR2T35	Del_15q13.1	0.615	1
XBP1	Del_4q35.1	0.615	1
XBP1	Del_15q13.1	0.615	1
FGFR2	8p-Del	0.615	1
OXCT2	Del_15q13.1	0.615	1
PAX2	Del_15q13.1	0.615	1
RIBC1	Del_4q35.1	0.615	1
RIBC1	Del_15q13.1	0.615	1
TTPAL	Del_15q13.1	0.615	1
ZBTB7C	Del_4q35.1	0.615	1
ZNF362	Del_15q13.1	0.615	1
8q-Amp	Del_10q23.31	0.615	1
CDKN1B	Del_18q23	0.616	1
CTCF	Del_17q21.31	0.616	1
DST	Del_14q24.1	0.616	1
PRICKLE3	Del_18q23	0.616	1
AARS	Del_12q23.1	0.617	1
AARS	Del_12q24.31	0.617	1
APC	Del_2q37.3	0.617	1
FOXA1	5p-Amp	0.617	1
FOXA1	Amp_11p13	0.617	1
MAP2K4	18p-Del	0.617	1
MLL3	Amp_10p15.1	0.617	1
PTEN	Amp_8p11.23	0.617	1
TP53	7p-Amp	0.617	1
VCPIP1	Del_12q23.1	0.617	1
WSCD2	Del_10q23.31	0.617	1
ZFP36L1	Del_12q23.1	0.617	1
ZFP36L1	Del_12q24.31	0.617	1
HLA-C	Del_12q23.1	0.617	1
HLA-C	Del_12q24.31	0.617	1
MYH9	Del_2q37.3	0.617	1
NFE2L3	Del_12q23.1	0.617	1
NFE2L3	Del_12q24.31	0.617	1
SPRR2B	Del_9p21.3	0.617	1
SDC1	Del_9p21.3	0.617	1
SPEN	1q-Amp	0.617	1
5p-Amp	4q-Del	0.617	1
4q-Del	Amp_11p13	0.617	1
4q-Del	Amp_19q13.42	0.617	1
Amp_17q23.1	Del_5q11.2	0.617	1
CDKN1B	7p-Amp	0.618	1
CTCF	1q-Amp	0.618	1
MAP3K1	AKD1	0.618	1
PTPN22	7p-Amp	0.618	1
TAF1L	1q-Amp	0.618	1
TBL1XR1	7p-Amp	0.618	1
THEM5	Del_16q24.3	0.618	1
AKD1	Amp_12p13.33	0.618	1
DLX6	20p-Amp	0.618	1
FXYD5	20p-Amp	0.618	1
ANGPT4	7p-Amp	0.618	1
CDC42EP1	20p-Amp	0.618	1
FGFR2	Del_16q24.3	0.618	1
NBPF9	20p-Amp	0.618	1
PCNXL2	Amp_3q26.32	0.618	1
CDH1	Amp_1p22.3	0.619	1
FAM86B1	Del_6q15	0.619	1
ATXN2	Del_6q27	0.619	1
GYG2	Del_6q15	0.619	1
MORN1	Del_6q15	0.619	1
PSIP1	Del_6q15	0.619	1
SDC1	Amp_8q24.21	0.619	1
SLC35B2	Del_6q15	0.619	1
TPP2	Del_6q15	0.619	1
20q-Amp	Del_16q24.3	0.619	1
ACTL6B	Del_17q21.31	0.62	1
CBFB	6q-Del	0.62	1
FBXW7	7q-Amp	0.62	1
PIK3CA	TBX3	0.62	1
PIK3R1	7q-Amp	0.62	1
RUNX1	16p-Amp	0.62	1
ABCA8	7q-Amp	0.62	1
DST	11q-Del	0.62	1
BCORL1	7q-Amp	0.62	1
APC	RUNX1	0.621	1
CASP8	Del_4p16.3	0.621	1
MAP2K4	MUC6	0.621	1
RUNX1	DNAH12	0.621	1
RUNX1	WDR52	0.621	1
COL6A5	20p-Amp	0.621	1
SPRR2B	11q-Del	0.621	1
UBC	Del_5q11.2	0.621	1
FRMPD2	Del_5q11.2	0.621	1
SDC1	11q-Del	0.621	1
11p-Del	Del_12p13.1	0.621	1
22q-Del	Amp_1q44	0.621	1
AQP12A	Del_12p13.1	0.622	1
EPDR1	Del_5q21.3	0.622	1
HIST1H2BC	Del_12p13.1	0.622	1
KRAS	Del_12p13.1	0.622	1
WSCD2	Del_10q26.3	0.622	1
FBXO17	Del_5q21.3	0.622	1
ICOSLG	Del_12p13.1	0.622	1
OR6C76	Del_12p13.1	0.622	1
AKT2	Del_5q21.3	0.622	1
CABYR	Del_12p13.1	0.622	1
CASZ1	9p-Del	0.622	1
CCDC82	Del_12p13.1	0.622	1
CDC42EP1	Del_5q21.3	0.622	1
CEP57	Del_12p13.1	0.622	1
CXCR3	Del_12p13.1	0.622	1
DLG1	9p-Del	0.622	1
MKL1	Del_5q21.3	0.622	1
TARBP2	Del_12p13.1	0.622	1
TCP11	Del_12p13.1	0.622	1
Amp_12q15	Del_7p22.3	0.622	1
APC	11p-Del	0.623	1
ASB10	5p-Amp	0.623	1
ASB10	Amp_6q21	0.623	1
ASB10	Amp_11p13	0.623	1
FAM20C	16p-Amp	0.623	1
FAM86B1	5p-Amp	0.623	1
FAM86B1	Amp_6q21	0.623	1
GATA3	16p-Amp	0.623	1
HIST1H2BC	Amp_11q13.3	0.623	1
RAB42	16p-Amp	0.623	1
SF3B1	11p-Del	0.623	1
TCP10	5p-Amp	0.623	1
TCP10	Amp_6q21	0.623	1
TCP10	Amp_19q13.42	0.623	1
AKD1	16q-Del	0.623	1
DNAH12	11p-Del	0.623	1
DNAH12	Del_9q34.2	0.623	1
FHOD3	Amp_1q44	0.623	1
GRHL2	Amp_6q21	0.623	1
GRHL2	Amp_11p13	0.623	1
GRHL2	Amp_19q13.42	0.623	1
GYG2	Amp_6q21	0.623	1
GYG2	Amp_11p13	0.623	1
MLC1	Amp_11q13.3	0.623	1
MORN1	5p-Amp	0.623	1
MORN1	Amp_6q21	0.623	1
MORN1	Amp_19q13.42	0.623	1
OR6C76	Amp_11q13.3	0.623	1
XBP1	16p-Amp	0.623	1
C15orf39	5p-Amp	0.623	1
C15orf39	Amp_11p13	0.623	1
C15orf39	Amp_19q13.42	0.623	1
CEP57	Amp_11q13.3	0.623	1
DOCK11	Amp_20q13.2	0.623	1
KDM6A	11p-Del	0.623	1
OXCT2	16p-Amp	0.623	1
PSIP1	Amp_11p13	0.623	1
RHBG	16p-Amp	0.623	1
RHOA	Amp_11q13.3	0.623	1
SLC35B2	5p-Amp	0.623	1
SLC35B2	Amp_19q13.42	0.623	1
TPP2	Amp_6q21	0.623	1
TPP2	Amp_11p13	0.623	1
16p-Amp	Del_10q26.3	0.623	1
5q-Del	Amp_12q15	0.623	1
MAP2K4	17q-Amp	0.624	1
DST	Amp_20q13.2	0.624	1
HLA-C	Del_8p23.2	0.624	1
DOCK11	Del_8p23.2	0.624	1
EIF4A2	Del_8p23.2	0.624	1
20p-Amp	Amp_3p25.1	0.624	1
ACTL6B	Amp_3p25.1	0.625	1
ACTL6B	Del_7p22.3	0.625	1
ARID1A	TAF1L	0.625	1
CDKN1B	Amp_3p25.1	0.625	1
CDKN1B	Del_7p22.3	0.625	1
GATA3	HRNR	0.625	1
GPS2	Amp_10q22.3	0.625	1
MAP2K4	18q-Del	0.625	1
MAP3K1	7q-Amp	0.625	1
RUNX1	Del_6p25.3	0.625	1
TBL1XR1	Amp_3p25.1	0.625	1
TBL1XR1	Del_7p22.3	0.625	1
THEM5	Amp_10q22.3	0.625	1
AKD1	14q-Del	0.625	1
AKD1	Amp_19q12	0.625	1
AKD1	Del_21q11.2	0.625	1
GPRIN2	Amp_10q22.3	0.625	1
PPEF1	Amp_10q22.3	0.625	1
SPRR2B	Amp_1q44	0.625	1
ANGPT4	Amp_3p25.1	0.625	1
ANGPT4	Del_7p22.3	0.625	1
SPEN	Del_9q21.11	0.625	1
ZNF687	Amp_10q22.3	0.625	1
7q-Amp	Del_9q21.11	0.625	1
8p-Amp	Amp_15q26.3	0.625	1
CDH1	MYB	0.626	1
FAM20C	20q-Amp	0.626	1
FAM20C	Amp_11q14.1	0.626	1
HLA-DRB5	20q-Amp	0.626	1
PIWIL1	Del_12p13.1	0.626	1
RAB42	20q-Amp	0.626	1
RAB42	Amp_11q14.1	0.626	1
RPGR	Del_12p13.1	0.626	1
VCPIP1	8q-Amp	0.626	1
ANKRD12	Del_12p13.1	0.626	1
CCL13	20q-Amp	0.626	1
HLA-C	8q-Amp	0.626	1
NFE2L3	8q-Amp	0.626	1
OR2T35	Amp_11q14.1	0.626	1
UBC	Del_1p22.1	0.626	1
KCNN3	8q-Amp	0.626	1
PAX2	20q-Amp	0.626	1
TGS1	Del_1p22.1	0.626	1
TNRC6B	Del_12p13.1	0.626	1
ZBTB7C	Amp_11q14.1	0.626	1
7p-Amp	Del_18q23	0.626	1
5q-Del	Amp_17q23.1	0.626	1
ARID1A	Del_17p12	0.627	1
GATA3	11p-Del	0.627	1
MLL3	4q-Del	0.627	1
WSCD2	4p-Del	0.627	1
HRNR	Amp_10q22.3	0.627	1
DLG1	4p-Del	0.627	1
DOCK11	8p-Del	0.627	1
17q-Amp	Del_9p23	0.627	1
Amp_8p11.23	Amp_19q12	0.627	1
MUC6	20p-Amp	0.628	1
RBMX	20p-Amp	0.628	1
ZMYM3	20p-Amp	0.628	1
FOXA1	RB1	0.629	1
PTEN	Del_4q35.1	0.629	1
FBXO17	Amp_6p23	0.629	1
FXYD5	Amp_6p23	0.629	1
PPEF1	Del_11q23.3	0.629	1
ZNF41	Del_11q23.3	0.629	1
AKT2	Amp_6p23	0.629	1
FGFR2	Del_11q23.3	0.629	1
IRS4	Del_11q23.3	0.629	1
NBPF9	Amp_6p23	0.629	1
Amp_11p13	Del_9q21.11	0.629	1
HIST1H2BC	4q-Del	0.63	1
KRAS	4q-Del	0.63	1
PIK3R1	Del_22q13.32	0.63	1
RUNX1	Amp_3p25.1	0.63	1
ABCA8	Del_22q13.32	0.63	1
HRNR	MED23	0.63	1
ICOSLG	4q-Del	0.63	1
OR6C76	4q-Del	0.63	1
CABYR	4q-Del	0.63	1
CXCR3	4q-Del	0.63	1
DOCK11	Del_5q11.2	0.63	1
C1QTNF5	Amp_15q26.3	0.631	1
CASP8	16p-Del	0.631	1
MAP2K4	15q-Del	0.631	1
MYB	16p-Del	0.631	1
PTHLH	Amp_15q26.3	0.631	1
ZFP36L2	Amp_15q26.3	0.631	1
CCNL2	Amp_15q26.3	0.631	1
OR4D10	Amp_15q26.3	0.631	1
UBC	16p-Del	0.631	1
ANKRD20A4	Amp_15q26.3	0.631	1
PCNXL2	Amp_10p15.1	0.631	1
TFE3	Amp_15q26.3	0.631	1
TGS1	16p-Del	0.631	1
7q-Amp	13q-Del	0.631	1
8p-Del	Amp_13q34	0.631	1
ACTL6B	Del_9p23	0.632	1
HLA-DRB5	Del_4p16.3	0.632	1
HLA-DRB5	Del_5q11.2	0.632	1
MLL3	Amp_3p25.1	0.632	1
RAB42	Del_4p16.3	0.632	1
RAB42	Del_5q11.2	0.632	1
SF3B1	TBX3	0.632	1
TAF1L	Del_9p23	0.632	1
TBX3	MYH9	0.632	1
TBX3	KDM6A	0.632	1
ANKRD12	Del_9p23	0.632	1
CCL13	Del_4p16.3	0.632	1
CCL13	Del_5q11.2	0.632	1
OR2T35	Del_4p16.3	0.632	1
XBP1	Del_4p16.3	0.632	1
XBP1	Del_5q11.2	0.632	1
ATHL1	Del_9p23	0.632	1
DLG1	18p-Del	0.632	1
OXCT2	Del_5q11.2	0.632	1
PAX2	Del_5q11.2	0.632	1
RHBG	Del_4p16.3	0.632	1
RHBG	Del_5q11.2	0.632	1
RIBC1	Del_4p16.3	0.632	1
RIBC1	Del_5q11.2	0.632	1
TTPAL	Del_4p16.3	0.632	1
TTPAL	Del_5q11.2	0.632	1
ZBTB7C	Del_4p16.3	0.632	1
ZBTB7C	Del_5q11.2	0.632	1
ZNF362	Del_5q11.2	0.632	1
GPS2	NCOR1	0.633	1
GPS2	17q-Amp	0.633	1
GPS2	Amp_4q13.3	0.633	1
HIST1H3B	17q-Amp	0.633	1
HIST1H3B	Amp_4q13.3	0.633	1
AKD1	Del_14q24.1	0.633	1
COL6A5	1p-Del	0.633	1
COL6A5	Amp_14q21.1	0.633	1
GPRIN2	17q-Amp	0.633	1
GPRIN2	Amp_4q13.3	0.633	1
HRNR	4p-Del	0.633	1
PPEF1	Amp_4q13.3	0.633	1
IRS4	17q-Amp	0.633	1
IRS4	Amp_4q13.3	0.633	1
ZNF687	17q-Amp	0.633	1
ZNF687	Amp_4q13.3	0.633	1
ERBB2	Del_1p36.13	0.634	1
PIK3R1	Amp_8p11.21	0.634	1
GRHL2	Amp_13q34	0.634	1
MORN1	Amp_13q34	0.634	1
BCORL1	Amp_8p11.21	0.634	1
DOCK11	Amp_15q26.3	0.634	1
MED23	Del_5q21.3	0.634	1
PSIP1	Amp_13q34	0.634	1
SPEN	Amp_19q12	0.634	1
ZMYM3	Del_5q21.3	0.634	1
7p-Amp	Amp_6p23	0.634	1
7p-Amp	Del_19q13.32	0.634	1
8q-Amp	Del_7q36.1	0.634	1
AQP12A	MAP3K1	0.635	1
AQP12A	Amp_12p13.33	0.635	1
ASB10	Del_6q27	0.635	1
CDH1	FAM20C	0.635	1
CDH1	RAB42	0.635	1
CDH1	OR2T35	0.635	1
CDH1	XBP1	0.635	1
CDH1	OXCT2	0.635	1
CDH1	PAX2	0.635	1
CDH1	TTPAL	0.635	1
CDH1	ZNF362	0.635	1
FAM86B1	Del_6q27	0.635	1
HIST1H2BC	MAP3K1	0.635	1
HIST1H2BC	Amp_12p13.33	0.635	1
HIST1H2BC	Del_9q21.11	0.635	1
HLA-DRB5	Del_1p22.1	0.635	1
KRAS	MAP3K1	0.635	1
KRAS	Amp_12p13.33	0.635	1
KRAS	Del_9q21.11	0.635	1
MAP3K1	ICOSLG	0.635	1
MAP3K1	CABYR	0.635	1
MAP3K1	CEP57	0.635	1
MAP3K1	CXCR3	0.635	1
MAP3K1	RHOA	0.635	1
TCP10	Del_6q27	0.635	1
GYG2	Del_6q27	0.635	1
ICOSLG	Del_9q21.11	0.635	1
MLC1	Amp_12p13.33	0.635	1
MLC1	Del_9q21.11	0.635	1
MORN1	Del_6q27	0.635	1
OR2T35	Del_1p22.1	0.635	1
OR6C76	Amp_12p13.33	0.635	1
OR6C76	Del_9q21.11	0.635	1
XBP1	Del_1p22.1	0.635	1
CABYR	Amp_12p13.33	0.635	1
CABYR	Del_9q21.11	0.635	1
CCDC82	Del_9q21.11	0.635	1
CEP57	Amp_12p13.33	0.635	1
CEP57	Del_9q21.11	0.635	1
CXCR3	Amp_12p13.33	0.635	1
CXCR3	Del_9q21.11	0.635	1
RHBG	Del_1p22.1	0.635	1
RHOA	Amp_12p13.33	0.635	1
RHOA	Del_9q21.11	0.635	1
RIBC1	Del_1p22.1	0.635	1
SLC35B2	Del_6q27	0.635	1
TARBP2	Del_9q21.11	0.635	1
TCP11	Amp_12p13.33	0.635	1
TCP11	Del_9q21.11	0.635	1
TTPAL	Del_1p22.1	0.635	1
ZBTB7C	Del_1p22.1	0.635	1
ZNF362	Del_1p22.1	0.635	1
17q-Amp	Amp_13q34	0.635	1
ARID1A	Del_1p36.13	0.636	1
CASP8	Amp_3q26.32	0.636	1
GATA3	Amp_11q14.1	0.636	1
HIST1H3B	Del_4q35.1	0.636	1
HIST1H3B	Del_15q13.1	0.636	1
MYB	Amp_3q26.32	0.636	1
RPGR	17p-Del	0.636	1
THEM5	Del_4q35.1	0.636	1
GPRIN2	Del_4q35.1	0.636	1
PPEF1	Del_4q35.1	0.636	1
FRMPD2	Amp_3q26.32	0.636	1
IRS4	Del_15q13.1	0.636	1
ZMYM3	Del_1p36.13	0.636	1
ZNF687	Del_4q35.1	0.636	1
22q-Del	Amp_8q24.21	0.636	1
Amp_1q21.3	Del_6q15	0.636	1
RUNX1	16q-Del	0.637	1
WSCD2	8p-Amp	0.637	1
SPRR2B	Amp_1q21.3	0.637	1
DLG1	13q-Del	0.637	1
MLL4	8p-Amp	0.637	1
MLL4	13q-Del	0.637	1
SDC1	Amp_1q21.3	0.637	1
Amp_1q21.3	Del_4q35.1	0.637	1
ACTL6B	Amp_11q13.3	0.638	1
ANGPT4	Amp_11q13.3	0.638	1
ATHL1	Amp_11q13.3	0.638	1
20p-Amp	Del_1p36.13	0.638	1
7p-Amp	15q-Del	0.638	1
AQP12A	Amp_19q12	0.639	1
AQP12A	Del_21q11.2	0.639	1
CDKN1B	Amp_19p13.12	0.639	1
CTCF	4q-Del	0.639	1
HIST1H2BC	14q-Del	0.639	1
HIST1H2BC	Amp_19q12	0.639	1
KRAS	14q-Del	0.639	1
KRAS	17q-Del	0.639	1
KRAS	Amp_19q12	0.639	1
KRAS	Del_21q11.2	0.639	1
MYB	PTEN	0.639	1
PTEN	FHOD3	0.639	1
PTEN	TGS1	0.639	1
PTHLH	TP53	0.639	1
TBL1XR1	Amp_19p13.12	0.639	1
TBX3	11q-Del	0.639	1
THEM5	16q-Del	0.639	1
TP53	ZFP36L2	0.639	1
TP53	ATXN7L1	0.639	1
GPRIN2	16q-Del	0.639	1
HRNR	17q-Amp	0.639	1
ICOSLG	14q-Del	0.639	1
ICOSLG	17q-Del	0.639	1
ICOSLG	Del_21q11.2	0.639	1
MLC1	14q-Del	0.639	1
MLC1	Amp_19q12	0.639	1
MLC1	Del_21q11.2	0.639	1
OR6C76	14q-Del	0.639	1
OR6C76	Amp_19q12	0.639	1
OR6C76	Del_21q11.2	0.639	1
PPEF1	16q-Del	0.639	1
ATHL1	Amp_19p13.12	0.639	1
CABYR	14q-Del	0.639	1
CABYR	17q-Del	0.639	1
CABYR	Amp_19q12	0.639	1
CASZ1	17p-Del	0.639	1
CCDC82	14q-Del	0.639	1
CCDC82	17q-Del	0.639	1
CCDC82	Amp_19q12	0.639	1
CEP57	Amp_19q12	0.639	1
CEP57	Del_21q11.2	0.639	1
CXCR3	14q-Del	0.639	1
CXCR3	17q-Del	0.639	1
FGFR2	16q-Del	0.639	1
RHOA	14q-Del	0.639	1
RHOA	Amp_19q12	0.639	1
RHOA	Del_21q11.2	0.639	1
TARBP2	14q-Del	0.639	1
TARBP2	17q-Del	0.639	1
TARBP2	Del_21q11.2	0.639	1
TCP11	14q-Del	0.639	1
TCP11	17q-Del	0.639	1
TCP11	Amp_19q12	0.639	1
1q-Del	Amp_19p13.12	0.639	1
FBXW7	RUNX1	0.64	1
MAP2K4	8q-Amp	0.64	1
PIK3R1	RUNX1	0.64	1
ATXN2	7q-Amp	0.64	1
DST	Del_16q24.3	0.64	1
ERBB3	Del_8p23.2	0.64	1
MED23	SPEN	0.64	1
MED23	7q-Amp	0.64	1
MUC6	7q-Amp	0.64	1
17q-Del	Amp_1q21.3	0.64	1
6q-Del	Amp_14q21.1	0.64	1
Amp_12q15	Amp_19q12	0.64	1
Amp_19q12	Del_7q36.1	0.64	1
ACTL6B	TP53	0.641	1
HLA-DRB5	Amp_3q26.32	0.641	1
PIK3CA	Del_7q36.1	0.641	1
TP53	1q-Del	0.641	1
CCL13	Amp_3q26.32	0.641	1
HRNR	18p-Del	0.641	1
OR2T35	Amp_3q26.32	0.641	1
XBP1	Amp_3q26.32	0.641	1
OXCT2	Amp_3q26.32	0.641	1
RIBC1	Amp_3q26.32	0.641	1
TGS1	Amp_1p22.3	0.641	1
ZBTB7C	Amp_3q26.32	0.641	1
18p-Del	Amp_19q12	0.641	1
5q-Del	Amp_1q21.3	0.641	1
AARS	Del_19q13.32	0.642	1
APC	Del_6p25.3	0.642	1
MAP2K4	WSCD2	0.642	1
MAP2K4	CASZ1	0.642	1
MAP2K4	DLG1	0.642	1
MAP2K4	MLL4	0.642	1
RUNX1	Del_12p13.1	0.642	1
SF3B1	22q-Del	0.642	1
VCPIP1	Del_19q13.32	0.642	1
WSCD2	6q-Del	0.642	1
ZFP36L1	Del_19q13.32	0.642	1
COL6A5	Del_12q24.31	0.642	1
DNAH12	Del_6p25.3	0.642	1
MYH9	Del_6p25.3	0.642	1
NFE2L3	Del_19q13.32	0.642	1
DLG1	6q-Del	0.642	1
KCNN3	Del_19q13.32	0.642	1
KDM6A	Del_6p25.3	0.642	1
Amp_19q13.42	Del_6q27	0.642	1
AQP12A	Amp_12q15	0.643	1
HIST1H2BC	Amp_12q15	0.643	1
HIST1H2BC	Del_7q36.1	0.643	1
KRAS	Amp_12q15	0.643	1
KRAS	Del_7q36.1	0.643	1
COL6A5	Amp_6p23	0.643	1
ICOSLG	Amp_12q15	0.643	1
MLC1	Amp_12q15	0.643	1
OR6C76	Del_7q36.1	0.643	1
CABYR	Amp_12q15	0.643	1
CABYR	Del_7q36.1	0.643	1
CEP57	Amp_12q15	0.643	1
CEP57	Del_7q36.1	0.643	1
CXCR3	Del_7q36.1	0.643	1
RHOA	Amp_12q15	0.643	1
TARBP2	Amp_12q15	0.643	1
TARBP2	Del_7q36.1	0.643	1
TCP11	Del_7q36.1	0.643	1
7q-Amp	Amp_10q22.3	0.643	1
7q-Amp	Amp_12q15	0.643	1
7q-Amp	Del_6q15	0.643	1
5q-Del	Amp_14q21.1	0.643	1
Amp_10q22.3	Amp_14q21.1	0.643	1
ARID1A	Del_19q13.32	0.644	1
FAM20C	Amp_1p22.3	0.644	1
HIST1H2BC	Del_22q13.32	0.644	1
HLA-DRB5	Amp_1p22.3	0.644	1
RB1	Amp_1q21.3	0.644	1
TP53	CASZ1	0.644	1
TP53	DLG1	0.644	1
CCL13	Amp_1p22.3	0.644	1
ICOSLG	Del_22q13.32	0.644	1
MLC1	Del_22q13.32	0.644	1
OR2T35	Amp_1p22.3	0.644	1
OR6C76	Del_22q13.32	0.644	1
XBP1	Amp_1p22.3	0.644	1
CABYR	Del_22q13.32	0.644	1
CXCR3	Del_22q13.32	0.644	1
NF1	Del_19q13.32	0.644	1
OXCT2	Amp_1p22.3	0.644	1
PAX2	Amp_1p22.3	0.644	1
RHBG	Amp_1p22.3	0.644	1
TTPAL	Amp_1p22.3	0.644	1
ZNF362	Amp_1p22.3	0.644	1
CASP8	Amp_10p15.1	0.645	1
FOXA1	Del_18q23	0.645	1
MED23	Amp_6p23	0.645	1
MUC6	Amp_6p23	0.645	1
PCNXL2	16q-Del	0.645	1
ZMYM3	Amp_6p23	0.645	1
7p-Amp	Amp_17q12	0.645	1
7q-Amp	Del_18q23	0.645	1
Amp_11q14.1	Amp_15q26.3	0.645	1
Amp_13q34	Del_9p23	0.645	1
AARS	17p-Del	0.646	1
ARID1A	Del_9q34.2	0.646	1
ASB10	Amp_14q21.1	0.646	1
FAM86B1	Amp_14q21.1	0.646	1
HIST1H2BC	Amp_8p11.21	0.646	1
MAP3K1	PIWIL1	0.646	1
MAP3K1	TAF1L	0.646	1
MAP3K1	ANKRD12	0.646	1
PIWIL1	Amp_12p13.33	0.646	1
PIWIL1	Del_9q21.11	0.646	1
RPGR	Amp_12p13.33	0.646	1
TAF1L	Del_9q21.11	0.646	1
TCP10	1p-Del	0.646	1
TCP10	Amp_14q21.1	0.646	1
TP53	OR2T35	0.646	1
TP53	XBP1	0.646	1
TP53	PAX2	0.646	1
TP53	RIBC1	0.646	1
TP53	ZBTB7C	0.646	1
TP53	ZNF362	0.646	1
VCPIP1	17p-Del	0.646	1
CCNL2	Del_17p12	0.646	1
GRHL2	1p-Del	0.646	1
GRHL2	Amp_14q21.1	0.646	1
GYG2	1p-Del	0.646	1
HLA-C	17p-Del	0.646	1
MLC1	Amp_8p11.21	0.646	1
MORN1	1p-Del	0.646	1
MORN1	Amp_14q21.1	0.646	1
NFE2L3	17p-Del	0.646	1
C15orf39	1p-Del	0.646	1
CABYR	Amp_8p11.21	0.646	1
DLG1	Del_6q15	0.646	1
FRMPD2	Amp_1q21.3	0.646	1
NF1	11p-Del	0.646	1
NF1	Del_9q34.2	0.646	1
PSIP1	Amp_14q21.1	0.646	1
SLC35B2	Amp_14q21.1	0.646	1
TNRC6B	Del_9q21.11	0.646	1
TPP2	Amp_14q21.1	0.646	1
USP36	1p-Del	0.646	1
8p-Amp	Del_11q23.3	0.646	1
CBFB	20p-Amp	0.647	1
HLA-DRB5	Amp_10p15.1	0.647	1
TBX3	Amp_3p25.1	0.647	1
CCL13	Amp_10p15.1	0.647	1
BCORL1	Del_2q37.3	0.647	1
OXCT2	Amp_10p15.1	0.647	1
PAX2	Amp_10p15.1	0.647	1
RIBC1	Amp_10p15.1	0.647	1
ZBTB7C	Amp_10p15.1	0.647	1
ZNF362	Amp_10p15.1	0.647	1
20p-Amp	Amp_1q21.3	0.647	1
CTCF	Del_13q14.2	0.648	1
EPDR1	Amp_8q24.21	0.648	1
FAM86B1	Del_1p36.13	0.648	1
HIST1H2BC	MLL3	0.648	1
MLL3	CABYR	0.648	1
MLL3	TARBP2	0.648	1
PIK3CA	Del_12q23.1	0.648	1
PIWIL1	Del_13q14.2	0.648	1
TAF1L	Del_13q14.2	0.648	1
ANKRD12	Del_13q14.2	0.648	1
ERBB3	Del_13q14.2	0.648	1
FBXO17	Amp_8q24.21	0.648	1
FXYD5	Amp_8q24.21	0.648	1
DOCK11	Amp_3q26.32	0.648	1
SLC35B2	Del_1p36.13	0.648	1
8p-Amp	Del_12q23.1	0.648	1
AARS	7p-Amp	0.649	1
CDKN1B	Del_17p12	0.649	1
GPS2	16p-Amp	0.649	1
PTPN22	Del_17p12	0.649	1
VCPIP1	7p-Amp	0.649	1
WSCD2	Del_13q14.2	0.649	1
ZFP36L1	7p-Amp	0.649	1
ATXN2	Amp_1q44	0.649	1
COL6A5	Amp_20q13.2	0.649	1
DNAH12	Del_18q23	0.649	1
HLA-C	7p-Amp	0.649	1
HRNR	8p-Amp	0.649	1
HRNR	18q-Del	0.649	1
NFE2L3	7p-Amp	0.649	1
WDR52	Del_18q23	0.649	1
ZNF41	16p-Amp	0.649	1
EIF4A2	7p-Amp	0.649	1
IRS4	16p-Amp	0.649	1
KCNN3	7p-Amp	0.649	1
SPEN	9p-Del	0.649	1
ZMYM3	Amp_1q44	0.649	1
7q-Amp	9p-Del	0.649	1
7q-Amp	Del_10q26.3	0.649	1
18p-Del	Amp_8p11.21	0.649	1
18p-Del	Amp_10q22.3	0.649	1
1p-Del	Amp_17q23.1	0.649	1
Del_7p22.3	Del_18q23	0.649	1
GATA3	PCNXL2	0.65	1
MLL3	9p-Del	0.65	1
SF3B1	Amp_17q23.1	0.65	1
TBX3	ABCA8	0.65	1
TBX3	BCORL1	0.65	1
HRNR	15q-Del	0.65	1
HRNR	9q-Del	0.65	1
MYH9	Amp_17q23.1	0.65	1
4q-Del	Amp_20q13.2	0.65	1
Amp_8p11.21	Del_6p25.3	0.65	1
Del_10q23.31	Del_16q24.3	0.65	1
ASB10	Del_12q23.1	0.651	1
ASB10	Del_12q24.31	0.651	1
C1QTNF5	5q-Del	0.651	1
EPDR1	Del_2q37.3	0.651	1
FAM20C	Del_17p12	0.651	1
FAM86B1	Del_12q23.1	0.651	1
FAM86B1	Del_12q24.31	0.651	1
FOXA1	Del_17q21.31	0.651	1
HLA-DRB5	Del_17p12	0.651	1
MAP3K1	Del_2q37.3	0.651	1
PIK3CA	Amp_3p25.1	0.651	1
PIK3CA	Del_7p22.3	0.651	1
PTHLH	5q-Del	0.651	1
RAB42	Del_17p12	0.651	1
SMAD2	5q-Del	0.651	1
SMAD4	5q-Del	0.651	1
CCL13	Del_17p12	0.651	1
CCNL2	5q-Del	0.651	1
FBXO17	8q-Amp	0.651	1
FBXO17	Del_2q37.3	0.651	1
GRHL2	Del_12q24.31	0.651	1
GYG2	Del_12q23.1	0.651	1
GYG2	Del_12q24.31	0.651	1
HRNR	MLL4	0.651	1
ICOSLG	Amp_20q13.2	0.651	1
OR4D10	5q-Del	0.651	1
OR6C76	Amp_20q13.2	0.651	1
ANKRD20A4	5q-Del	0.651	1
CDC42EP1	Del_2q37.3	0.651	1
CXCR3	Amp_20q13.2	0.651	1
MKL1	8q-Amp	0.651	1
MKL1	Del_2q37.3	0.651	1
MR1	5q-Del	0.651	1
MUC6	Del_11q23.3	0.651	1
PSIP1	Del_12q23.1	0.651	1
PSIP1	Del_12q24.31	0.651	1
RHBG	Del_17p12	0.651	1
RIBC1	Del_17p12	0.651	1
TCP11	Amp_20q13.2	0.651	1
TPP2	Del_12q24.31	0.651	1
USP36	Del_12q23.1	0.651	1
USP36	Del_12q24.31	0.651	1
ZBTB7C	Del_17p12	0.651	1
20p-Amp	Del_4p16.3	0.651	1
20q-Amp	4p-Del	0.651	1
CDKN1B	Del_19p13.3	0.652	1
MLL3	7q-Amp	0.652	1
PIK3CA	FHOD3	0.652	1
PIK3CA	TGS1	0.652	1
PIWIL1	14q-Del	0.652	1
PIWIL1	Amp_19q12	0.652	1
PIWIL1	Del_21q11.2	0.652	1
PTEN	13q-Del	0.652	1
PTPN22	Del_19p13.3	0.652	1
RPGR	14q-Del	0.652	1
RPGR	17q-Del	0.652	1
TAF1L	14q-Del	0.652	1
TBL1XR1	Del_19p13.3	0.652	1
ERBB3	14q-Del	0.652	1
TNRC6B	17q-Del	0.652	1
CDKN1B	Amp_10q22.3	0.653	1
FAM20C	Del_10q23.31	0.653	1
FOXA1	Amp_14q21.1	0.653	1
HLA-DRB5	Del_10q23.31	0.653	1
PIK3R1	11p-Del	0.653	1
RAB42	Del_10q23.31	0.653	1
TBL1XR1	Amp_10q22.3	0.653	1
THEM5	22q-Del	0.653	1
CCL13	Del_10q23.31	0.653	1
GPRIN2	22q-Del	0.653	1
PPEF1	22q-Del	0.653	1
XBP1	Del_10q23.31	0.653	1
BCORL1	Del_9q34.2	0.653	1
FGFR2	22q-Del	0.653	1
MED23	Amp_11q13.3	0.653	1
MUC6	Amp_11q13.3	0.653	1
RHBG	Del_10q23.31	0.653	1
RIBC1	Del_10q23.31	0.653	1
TTPAL	Del_10q23.31	0.653	1
ZNF362	Del_10q23.31	0.653	1
ZNF687	22q-Del	0.653	1
8p-Amp	17q-Del	0.653	1
1q-Del	Amp_10q22.3	0.653	1
Amp_12q15	Del_7q36.1	0.653	1
APC	Del_12p13.1	0.654	1
ARID1A	Del_15q13.1	0.654	1
GPS2	Amp_11q14.1	0.654	1
KRAS	8p-Del	0.654	1
TBX3	Amp_11q14.1	0.654	1
THEM5	Amp_11q14.1	0.654	1
ATXN2	Del_9p21.3	0.654	1
COL6A5	8p-Del	0.654	1
DNAH12	Del_17q21.31	0.654	1
GPRIN2	Amp_11q14.1	0.654	1
MLC1	8p-Del	0.654	1
ZNF41	Amp_11q14.1	0.654	1
CASZ1	Del_17p12	0.654	1
CEP57	8p-Del	0.654	1
FGFR2	Amp_11q14.1	0.654	1
IRS4	20q-Amp	0.654	1
KDM6A	Del_17q21.31	0.654	1
NF1	1q-Amp	0.654	1
SPEN	17q-Amp	0.654	1
SPEN	Amp_4q13.3	0.654	1
TARBP2	8p-Del	0.654	1
ZMYM3	Del_9p21.3	0.654	1
ZNF687	20q-Amp	0.654	1
20q-Amp	17q-Del	0.654	1
AARS	Amp_3p25.1	0.655	1
AARS	Del_7p22.3	0.655	1
AARS	Del_13q14.2	0.655	1
CASP8	Del_10q23.31	0.655	1
EPDR1	11p-Del	0.655	1
EPDR1	Amp_1q44	0.655	1
EPDR1	Del_9q34.2	0.655	1
MLL3	Amp_11q13.3	0.655	1
VCPIP1	Amp_3p25.1	0.655	1
ZFP36L1	Del_7p22.3	0.655	1
FBXO17	11p-Del	0.655	1
FBXO17	Del_9q34.2	0.655	1
FXYD5	11p-Del	0.655	1
FXYD5	Del_9q34.2	0.655	1
NFE2L3	Amp_3p25.1	0.655	1
NFE2L3	Del_7p22.3	0.655	1
SHISA4	Del_9q34.2	0.655	1
AKT2	11p-Del	0.655	1
AKT2	Del_9q34.2	0.655	1
CDC42EP1	11p-Del	0.655	1
CDC42EP1	Del_9q34.2	0.655	1
EIF4A2	Amp_3p25.1	0.655	1
EIF4A2	Del_7p22.3	0.655	1
EIF4A2	Del_13q14.2	0.655	1
FRMPD2	Del_10q23.31	0.655	1
KCNN3	Amp_3p25.1	0.655	1
MKL1	11p-Del	0.655	1
MKL1	Del_9q34.2	0.655	1
NBPF9	11p-Del	0.655	1
TGS1	Del_10q23.31	0.655	1
Amp_10q22.3	Del_12q23.1	0.655	1
AQP12A	15q-Del	0.656	1
AQP12A	Del_20p13	0.656	1
FAM20C	9p-Del	0.656	1
GATA3	HLA-DRB5	0.656	1
GATA3	RAB42	0.656	1
GATA3	CCL13	0.656	1
GATA3	OR2T35	0.656	1
GATA3	XBP1	0.656	1
GATA3	OXCT2	0.656	1
GATA3	RHBG	0.656	1
GATA3	TTPAL	0.656	1
GATA3	ZNF362	0.656	1
GPS2	16p-Del	0.656	1
HIST1H2BC	9q-Del	0.656	1
HIST1H2BC	Del_20p13	0.656	1
HIST1H3B	16p-Del	0.656	1
HLA-DRB5	9p-Del	0.656	1
HLA-DRB5	Del_10q26.3	0.656	1
KRAS	15q-Del	0.656	1
KRAS	9q-Del	0.656	1
KRAS	Del_20p13	0.656	1
RAB42	9p-Del	0.656	1
RAB42	Del_10q26.3	0.656	1
RUNX1	Del_22q13.32	0.656	1
THEM5	16p-Del	0.656	1
CCL13	9p-Del	0.656	1
CCL13	Del_10q26.3	0.656	1
GPRIN2	16p-Del	0.656	1
ICOSLG	15q-Del	0.656	1
ICOSLG	Del_20p13	0.656	1
MLC1	9q-Del	0.656	1
MLC1	Del_20p13	0.656	1
OR2T35	9p-Del	0.656	1
OR2T35	Del_10q26.3	0.656	1
OR6C76	15q-Del	0.656	1
OR6C76	9q-Del	0.656	1
OR6C76	Del_20p13	0.656	1
XBP1	9p-Del	0.656	1
CABYR	15q-Del	0.656	1
CCDC82	15q-Del	0.656	1
CEP57	15q-Del	0.656	1
CEP57	Del_20p13	0.656	1
CXCR3	15q-Del	0.656	1
CXCR3	9q-Del	0.656	1
CXCR3	Del_20p13	0.656	1
IRS4	16p-Del	0.656	1
RHBG	9p-Del	0.656	1
RHOA	15q-Del	0.656	1
RHOA	9q-Del	0.656	1
RHOA	Del_20p13	0.656	1
RIBC1	9p-Del	0.656	1
RIBC1	Del_10q26.3	0.656	1
TARBP2	15q-Del	0.656	1
TARBP2	9q-Del	0.656	1
TARBP2	Del_20p13	0.656	1
TCP11	15q-Del	0.656	1
TCP11	9q-Del	0.656	1
TCP11	Del_20p13	0.656	1
TTPAL	9p-Del	0.656	1
TTPAL	Del_10q26.3	0.656	1
ZBTB7C	9p-Del	0.656	1
ZNF362	Del_10q26.3	0.656	1
ZNF687	16p-Del	0.656	1
5p-Amp	Amp_1p22.3	0.656	1
8q-Amp	16q-Del	0.656	1
18q-Del	Amp_10q22.3	0.657	1
NCOR1	1p-Del	0.658	1
RB1	Amp_15q26.3	0.658	1
RUNX1	4q-Del	0.658	1
6q-Del	Del_12q24.31	0.658	1
CTCF	Del_7q36.1	0.659	1
HIST1H2BC	Del_8p23.2	0.659	1
HLA-DRB5	4p-Del	0.659	1
PIWIL1	Del_7q36.1	0.659	1
PTHLH	Amp_17q12	0.659	1
RAB42	4p-Del	0.659	1
RPGR	Del_7q36.1	0.659	1
RUNX1	ATXN2	0.659	1
RUNX1	MED23	0.659	1
RUNX1	MUC6	0.659	1
RUNX1	RBMX	0.659	1
TAF1L	Del_7q36.1	0.659	1
ZFP36L2	Amp_17q12	0.659	1
ANKRD12	Del_7q36.1	0.659	1
ATXN7L1	Amp_17q12	0.659	1
CCL13	4p-Del	0.659	1
CCNL2	Amp_17q12	0.659	1
ERBB3	Amp_12q15	0.659	1
OR2T35	4p-Del	0.659	1
OR4D10	Amp_17q12	0.659	1
XBP1	4p-Del	0.659	1
ANKRD20A4	Amp_17q12	0.659	1
CABYR	Del_8p23.2	0.659	1
CXCR3	Del_8p23.2	0.659	1
MUC6	Del_8p23.2	0.659	1
NF1	Del_3p21.31	0.659	1
RHBG	4p-Del	0.659	1
RIBC1	4p-Del	0.659	1
TARBP2	Del_8p23.2	0.659	1
TTPAL	4p-Del	0.659	1
ZBTB7C	4p-Del	0.659	1
Amp_8p11.21	Del_1p22.1	0.659	1
ACTL6B	17q-Amp	0.66	1
ACTL6B	Amp_4q13.3	0.66	1
ACTL6B	Del_14q24.1	0.66	1
CBFB	CTCF	0.66	1
CBFB	PIWIL1	0.66	1
CBFB	RPGR	0.66	1
CBFB	ANKRD12	0.66	1
CDKN1B	Del_11p15.5	0.66	1
CTCF	FOXA1	0.66	1
GATA3	FRMPD2	0.66	1
GATA3	TGS1	0.66	1
NCOR1	PTPN22	0.66	1
NCOR1	TBL1XR1	0.66	1
NCOR1	PRICKLE3	0.66	1
NCOR1	ATHL1	0.66	1
NCOR1	1q-Del	0.66	1
PTEN	Amp_11q14.1	0.66	1
PTPN22	Amp_4q13.3	0.66	1
TBL1XR1	17q-Amp	0.66	1
TBL1XR1	Amp_4q13.3	0.66	1
TBL1XR1	Del_14q24.1	0.66	1
GPRIN2	Amp_17q23.1	0.66	1
PRICKLE3	Amp_4q13.3	0.66	1
UBC	Del_10q26.3	0.66	1
ANGPT4	17q-Amp	0.66	1
ANGPT4	Del_11p15.5	0.66	1
DOCK11	Amp_10p15.1	0.66	1
FRMPD2	Del_10q26.3	0.66	1
IRS4	Amp_17q23.1	0.66	1
PCNXL2	Amp_19q13.42	0.66	1
TGS1	9p-Del	0.66	1
ZNF687	Amp_17q23.1	0.66	1
1q-Del	Amp_4q13.3	0.66	1
ARID1A	PIK3R1	0.661	1
ARID1A	BCORL1	0.661	1
ASB10	Del_9p21.3	0.661	1
C1QTNF5	5p-Amp	0.661	1
C1QTNF5	Amp_6q21	0.661	1
FAM86B1	Del_9p21.3	0.661	1
MAP2K4	16p-Del	0.661	1
PTHLH	Amp_6q21	0.661	1
SMAD2	5p-Amp	0.661	1
SMAD2	Amp_6q21	0.661	1
SMAD2	Amp_19q13.42	0.661	1
SMAD4	Amp_6q21	0.661	1
SMAD4	Amp_11p13	0.661	1
SMAD4	Amp_19q13.42	0.661	1
WSCD2	SPEN	0.661	1
WSCD2	7q-Amp	0.661	1
ZFP36L2	5p-Amp	0.661	1
ZFP36L2	Amp_6q21	0.661	1
ZFP36L2	Amp_11p13	0.661	1
ATXN7L1	1q-Amp	0.661	1
ATXN7L1	Amp_19q13.42	0.661	1
CCNL2	5p-Amp	0.661	1
CCNL2	Amp_11p13	0.661	1
CCNL2	Amp_19q13.42	0.661	1
GRHL2	Del_3p21.31	0.661	1
GRHL2	Del_9p21.3	0.661	1
GYG2	Del_3p21.31	0.661	1
GYG2	Del_9p21.3	0.661	1
OR4D10	1q-Amp	0.661	1
OR4D10	5p-Amp	0.661	1
OR4D10	Amp_19q13.42	0.661	1
ANKRD20A4	5p-Amp	0.661	1
ANKRD20A4	Amp_11p13	0.661	1
ANKRD20A4	Amp_19q13.42	0.661	1
CASZ1	7q-Amp	0.661	1
DLG1	7q-Amp	0.661	1
MR1	5p-Amp	0.661	1
MR1	Amp_6q21	0.661	1
MR1	Amp_11p13	0.661	1
MR1	Amp_19q13.42	0.661	1
PSIP1	Del_3p21.31	0.661	1
PSIP1	Del_9p21.3	0.661	1
RBMX	16q-Del	0.661	1
SLC35B2	Del_9p21.3	0.661	1
TFE3	5p-Amp	0.661	1
TPP2	Del_9p21.3	0.661	1
17q-Amp	4p-Del	0.661	1
5p-Amp	16p-Del	0.661	1
7p-Amp	Del_7p22.3	0.661	1
Amp_3p25.1	Del_16q24.3	0.661	1
CBFB	Del_12q23.1	0.662	1
FAM20C	1q-Amp	0.662	1
FAM20C	18p-Del	0.662	1
FOXA1	Del_12q23.1	0.662	1
FOXA1	Del_12q24.31	0.662	1
HLA-DRB5	1q-Amp	0.662	1
HLA-DRB5	18p-Del	0.662	1
RAB42	18p-Del	0.662	1
CCL13	18p-Del	0.662	1
XBP1	18p-Del	0.662	1
PAX2	1q-Amp	0.662	1
RHBG	18p-Del	0.662	1
RIBC1	18p-Del	0.662	1
TTPAL	1q-Amp	0.662	1
TTPAL	18p-Del	0.662	1
ZBTB7C	1q-Amp	0.662	1
ZNF362	1q-Amp	0.662	1
ZNF362	18p-Del	0.662	1
1q-Amp	Amp_19q13.42	0.662	1
Amp_12q15	Del_1p36.13	0.662	1
APC	8q-Amp	0.663	1
HIST1H3B	Del_4p16.3	0.663	1
MAP3K1	Del_9q34.2	0.663	1
THEM5	Del_4p16.3	0.663	1
PPEF1	Del_4p16.3	0.663	1
ZNF41	Del_5q11.2	0.663	1
CASZ1	20p-Amp	0.663	1
FGFR2	Del_4p16.3	0.663	1
IRS4	Del_4p16.3	0.663	1
KDM6A	8q-Amp	0.663	1
MLL4	20p-Amp	0.663	1
ZNF687	Del_4p16.3	0.663	1
ARID1A	Amp_3p25.1	0.664	1
CDKN1B	Del_22q13.32	0.664	1
PTEN	PPEF1	0.664	1
PTEN	IRS4	0.664	1
PTEN	ZNF687	0.664	1
PTPN22	Del_22q13.32	0.664	1
PRICKLE3	Del_22q13.32	0.664	1
UBC	Amp_17q12	0.664	1
FRMPD2	Amp_17q12	0.664	1
TGS1	Amp_17q12	0.664	1
16p-Amp	Amp_14q21.1	0.664	1
CASP8	MAP2K4	0.665	1
CASP8	4p-Del	0.665	1
FAM20C	8p-Amp	0.665	1
FAM20C	18q-Del	0.665	1
HLA-DRB5	8p-Amp	0.665	1
HLA-DRB5	18q-Del	0.665	1
MAP2K4	MYB	0.665	1
MAP2K4	FHOD3	0.665	1
MAP2K4	FRMPD2	0.665	1
MAP2K4	20p-Amp	0.665	1
MLL3	Amp_6q21	0.665	1
MLL3	Amp_11p13	0.665	1
MLL3	Amp_19q13.42	0.665	1
RAB42	8p-Amp	0.665	1
RAB42	18q-Del	0.665	1
CCL13	8p-Amp	0.665	1
CCL13	18q-Del	0.665	1
FHOD3	4p-Del	0.665	1
SPRR2B	Del_9p23	0.665	1
XBP1	18q-Del	0.665	1
CASZ1	Del_16q24.3	0.665	1
MLL4	Del_16q24.3	0.665	1
OXCT2	8p-Amp	0.665	1
PSIP1	Del_16q24.3	0.665	1
RHBG	8p-Amp	0.665	1
RHBG	18q-Del	0.665	1
RIBC1	8p-Amp	0.665	1
RIBC1	18q-Del	0.665	1
SDC1	Del_9p23	0.665	1
SLC35B2	Del_16q24.3	0.665	1
TTPAL	8p-Amp	0.665	1
TTPAL	18q-Del	0.665	1
ZBTB7C	8p-Amp	0.665	1
ZNF362	8p-Amp	0.665	1
ZNF362	18q-Del	0.665	1
1q-Amp	Del_7q36.1	0.665	1
Amp_1q44	Del_19q13.32	0.665	1
AARS	Del_18q23	0.666	1
CTCF	MLL3	0.666	1
EPDR1	Del_6p25.3	0.666	1
MLL3	Amp_19p13.12	0.666	1
DLX6	Del_6p25.3	0.666	1
FBXO17	Del_6p25.3	0.666	1
FXYD5	Del_6p25.3	0.666	1
NFE2L3	Del_18q23	0.666	1
SHISA4	Del_6p25.3	0.666	1
AKT2	Del_6p25.3	0.666	1
CDC42EP1	Del_6p25.3	0.666	1
DOCK11	5q-Del	0.666	1
NBPF9	Del_6p25.3	0.666	1
Amp_4q13.3	Del_19p13.3	0.666	1
CDH1	GPRIN2	0.667	1
CDH1	PPEF1	0.667	1
CDH1	ZNF41	0.667	1
CDH1	ZNF687	0.667	1
EPDR1	17p-Del	0.667	1
GPS2	Del_1p22.1	0.667	1
MAP3K1	9q-Del	0.667	1
PTPN22	Amp_8p11.21	0.667	1
TBL1XR1	Amp_8p11.21	0.667	1
DLX6	17p-Del	0.667	1
FXYD5	17p-Del	0.667	1
GPRIN2	Del_1p22.1	0.667	1
HRNR	Amp_11q13.3	0.667	1
PPEF1	Del_1p22.1	0.667	1
PRICKLE3	Amp_8p11.21	0.667	1
WDR52	4q-Del	0.667	1
KDM6A	4q-Del	0.667	1
MKL1	17p-Del	0.667	1
NBPF9	17p-Del	0.667	1
1q-Del	Amp_8p11.21	0.667	1
AARS	Amp_19p13.12	0.668	1
ASB10	11q-Del	0.668	1
FAM86B1	11q-Del	0.668	1
HLA-DRB5	6q-Del	0.668	1
PIK3CA	HLA-C	0.668	1
PIK3CA	EIF4A2	0.668	1
RAB42	6q-Del	0.668	1
RPGR	Del_14q24.1	0.668	1
TAF1L	Del_14q24.1	0.668	1
ZFP36L1	Amp_19p13.12	0.668	1
ANKRD12	Del_14q24.1	0.668	1
CCL13	6q-Del	0.668	1
COL6A5	Del_19p13.3	0.668	1
ERBB3	Del_11p15.5	0.668	1
GRHL2	11q-Del	0.668	1
XBP1	6q-Del	0.668	1
EIF4A2	Amp_19p13.12	0.668	1
OXCT2	6q-Del	0.668	1
PAX2	6q-Del	0.668	1
PCNXL2	Amp_1q21.3	0.668	1
PSIP1	11q-Del	0.668	1
RHBG	6q-Del	0.668	1
RIBC1	6q-Del	0.668	1
TTPAL	6q-Del	0.668	1
ZBTB7C	6q-Del	0.668	1
1q-Amp	Amp_20q13.2	0.668	1
5p-Amp	1p-Del	0.668	1
8p-Amp	Del_7q36.1	0.668	1
1p-Del	Amp_6q21	0.668	1
ARID1A	Del_6p25.3	0.669	1
NCOR1	Del_12q23.1	0.669	1
SF3B1	Del_9p23	0.669	1
TAF1L	Del_11q23.3	0.669	1
TBX3	MUC6	0.669	1
DNAH12	Del_9p23	0.669	1
UBC	18p-Del	0.669	1
NF1	Del_6p25.3	0.669	1
SPEN	9q-Del	0.669	1
7q-Amp	15q-Del	0.669	1
7q-Amp	9q-Del	0.669	1
Amp_10q22.3	Del_9q21.11	0.669	1
Amp_11p13	Del_14q24.1	0.669	1
EPDR1	Amp_1q21.3	0.67	1
VCPIP1	Del_17q21.31	0.67	1
HLA-C	Del_17q21.31	0.67	1
CDC42EP1	Amp_1q21.3	0.67	1
EIF4A2	Del_17q21.31	0.67	1
KCNN3	Del_17q21.31	0.67	1
PTHLH	Amp_8q24.21	0.671	1
RPGR	Amp_8p11.23	0.671	1
ZFP36L2	Amp_8q24.21	0.671	1
ANKRD12	Amp_8p11.23	0.671	1
ERBB3	Amp_8p11.23	0.671	1
BCORL1	Del_6p25.3	0.671	1
7q-Amp	Del_9p23	0.671	1
AARS	Amp_8p11.23	0.672	1
GPS2	DST	0.672	1
PTHLH	Amp_13q34	0.672	1
SMAD2	Amp_13q34	0.672	1
SMAD4	Amp_13q34	0.672	1
THEM5	DST	0.672	1
WSCD2	1q-Amp	0.672	1
ATXN7L1	Amp_13q34	0.672	1
DST	GPRIN2	0.672	1
HLA-C	Amp_8p11.23	0.672	1
OR4D10	Amp_13q34	0.672	1
ANKRD20A4	Amp_13q34	0.672	1
EIF4A2	Amp_8p11.23	0.672	1
MR1	Amp_13q34	0.672	1
7q-Amp	18q-Del	0.672	1
22q-Del	Amp_1p22.3	0.672	1
APC	Amp_12p13.33	0.673	1
CASP8	HRNR	0.673	1
CDKN1B	Amp_20q13.2	0.673	1
MAP3K1	SF3B1	0.673	1
MAP3K1	WDR52	0.673	1
MYB	HRNR	0.673	1
SF3B1	Amp_12p13.33	0.673	1
DNAH12	Amp_12p13.33	0.673	1
DNAH12	Del_9q21.11	0.673	1
FXYD5	Del_13q14.2	0.673	1
HRNR	UBC	0.673	1
SHISA4	Del_13q14.2	0.673	1
WDR52	Amp_12p13.33	0.673	1
AKT2	Del_12p13.1	0.673	1
AKT2	Del_13q14.2	0.673	1
CDC42EP1	Del_12p13.1	0.673	1
CDC42EP1	Del_13q14.2	0.673	1
KDM6A	Amp_12p13.33	0.673	1
KDM6A	Del_9q21.11	0.673	1
MKL1	Del_12p13.1	0.673	1
18q-Del	Del_5q21.3	0.673	1
1q-Del	Amp_20q13.2	0.673	1
KRAS	Amp_15q26.3	0.674	1
MYB	8p-Amp	0.674	1
RUNX1	Amp_10q22.3	0.674	1
ANKRD12	Amp_17q12	0.674	1
FHOD3	8p-Amp	0.674	1
ICOSLG	Amp_15q26.3	0.674	1
MLC1	Amp_15q26.3	0.674	1
OR6C76	Amp_15q26.3	0.674	1
CABYR	Amp_15q26.3	0.674	1
CEP57	Amp_15q26.3	0.674	1
TARBP2	Amp_15q26.3	0.674	1
TCP11	Amp_15q26.3	0.674	1
TGS1	8p-Amp	0.674	1
FAM86B1	Del_19q13.32	0.675	1
FOXA1	Del_22q13.32	0.675	1
RUNX1	14q-Del	0.675	1
TCP10	Del_19q13.32	0.675	1
GRHL2	Del_19q13.32	0.675	1
GYG2	Del_19q13.32	0.675	1
MORN1	Del_19q13.32	0.675	1
PCNXL2	6q-Del	0.675	1
USP36	Del_19q13.32	0.675	1
GPS2	Amp_3q26.32	0.676	1
PTPN22	8p-Del	0.676	1
THEM5	Amp_3q26.32	0.676	1
PRICKLE3	8p-Del	0.676	1
ZNF41	Amp_3q26.32	0.676	1
PCNXL2	Amp_13q34	0.676	1
ZNF687	Amp_3q26.32	0.676	1
16p-Del	Amp_3q26.32	0.676	1
C1QTNF5	13q-Del	0.677	1
CBFB	SF3B1	0.677	1
CBFB	WDR52	0.677	1
CBFB	KDM6A	0.677	1
ERBB2	22q-Del	0.677	1
FOXA1	DNAH12	0.677	1
MYB	8q-Amp	0.677	1
NCOR1	4q-Del	0.677	1
ZFP36L2	13q-Del	0.677	1
AKD1	16p-Amp	0.677	1
MR1	13q-Del	0.677	1
TGS1	8q-Amp	0.677	1
17q-Amp	4q-Del	0.677	1
FOXA1	13q-Del	0.678	1
HRNR	Del_19p13.3	0.678	1
8p-Amp	Amp_4q13.3	0.678	1
4q-Del	Amp_14q21.1	0.678	1
MYB	6q-Del	0.679	1
PIWIL1	15q-Del	0.679	1
RB1	Amp_3q26.32	0.679	1
RPGR	Del_20p13	0.679	1
RUNX1	WSCD2	0.679	1
RUNX1	DLG1	0.679	1
TAF1L	15q-Del	0.679	1
TAF1L	9q-Del	0.679	1
ERBB3	9q-Del	0.679	1
ERBB3	Del_20p13	0.679	1
FHOD3	6q-Del	0.679	1
MLL4	Amp_6p23	0.679	1
TGS1	6q-Del	0.679	1
TNRC6B	9q-Del	0.679	1
TNRC6B	Del_20p13	0.679	1
7q-Amp	6q-Del	0.679	1
Amp_20q13.2	Del_1p22.1	0.679	1
APC	17q-Del	0.68	1
C1QTNF5	Amp_1q44	0.68	1
HIST1H3B	Amp_1p22.3	0.68	1
PTPN22	Del_15q13.1	0.68	1
SF3B1	1q-Amp	0.68	1
SF3B1	14q-Del	0.68	1
SMAD2	Amp_1q44	0.68	1
DNAH12	14q-Del	0.68	1
DNAH12	17q-Del	0.68	1
DNAH12	Amp_19q12	0.68	1
GPRIN2	Amp_1p22.3	0.68	1
MYH9	14q-Del	0.68	1
MYH9	17q-Del	0.68	1
MYH9	Amp_19q12	0.68	1
PRICKLE3	Del_4q35.1	0.68	1
WDR52	1q-Amp	0.68	1
WDR52	17q-Del	0.68	1
ANGPT4	Del_4q35.1	0.68	1
FGFR2	Amp_1p22.3	0.68	1
KDM6A	Amp_19q12	0.68	1
TFE3	Amp_1q44	0.68	1
13q-Del	Amp_14q21.1	0.68	1
6q-Del	Amp_12q15	0.68	1
9q-Del	Amp_19q12	0.68	1
AARS	Amp_10q22.3	0.681	1
AARS	Del_9p23	0.681	1
ASB10	7p-Amp	0.681	1
EPDR1	4q-Del	0.681	1
ERBB2	Amp_6q21	0.681	1
ERBB2	Amp_11p13	0.681	1
FAM20C	20p-Amp	0.681	1
FAM86B1	7p-Amp	0.681	1
HLA-DRB5	20p-Amp	0.681	1
RAB42	20p-Amp	0.681	1
VCPIP1	Del_9p23	0.681	1
ZFP36L1	Amp_10q22.3	0.681	1
CCL13	20p-Amp	0.681	1
DST	13q-Del	0.681	1
FBXO17	4q-Del	0.681	1
GRHL2	7p-Amp	0.681	1
GYG2	7p-Amp	0.681	1
HLA-C	Amp_10q22.3	0.681	1
MORN1	7p-Amp	0.681	1
NFE2L3	Amp_10q22.3	0.681	1
OR2T35	20p-Amp	0.681	1
AKT2	4q-Del	0.681	1
C15orf39	7p-Amp	0.681	1
CDC42EP1	4q-Del	0.681	1
DOCK11	Amp_11p13	0.681	1
DOCK11	Amp_19q13.42	0.681	1
EIF4A2	Amp_10q22.3	0.681	1
MKL1	4q-Del	0.681	1
NBPF9	4q-Del	0.681	1
PAX2	20p-Amp	0.681	1
PSIP1	7p-Amp	0.681	1
RIBC1	20p-Amp	0.681	1
SLC35B2	7p-Amp	0.681	1
TPP2	7p-Amp	0.681	1
USP36	7p-Amp	0.681	1
20p-Amp	Del_3p21.31	0.681	1
5p-Amp	Del_12q23.1	0.681	1
5p-Amp	Del_12q24.31	0.681	1
ACTL6B	16p-Del	0.682	1
C1QTNF5	1p-Del	0.682	1
CDKN1B	16p-Del	0.682	1
HIST1H2BC	22q-Del	0.682	1
MYB	SPEN	0.682	1
MYB	7q-Amp	0.682	1
PTHLH	Amp_14q21.1	0.682	1
SMAD2	Amp_14q21.1	0.682	1
SMAD4	1p-Del	0.682	1
TBL1XR1	16p-Del	0.682	1
ZFP36L2	1p-Del	0.682	1
ZFP36L2	Amp_14q21.1	0.682	1
AKD1	20q-Amp	0.682	1
ATXN7L1	1p-Del	0.682	1
ATXN7L1	Amp_14q21.1	0.682	1
CCNL2	1p-Del	0.682	1
CCNL2	Amp_14q21.1	0.682	1
ICOSLG	22q-Del	0.682	1
MLC1	22q-Del	0.682	1
OR4D10	1p-Del	0.682	1
OR4D10	Amp_14q21.1	0.682	1
PRICKLE3	16p-Del	0.682	1
SPRR2B	Del_14q24.1	0.682	1
UBC	7q-Amp	0.682	1
ANGPT4	16p-Del	0.682	1
ANKRD20A4	1p-Del	0.682	1
CABYR	22q-Del	0.682	1
CXCR3	22q-Del	0.682	1
FRMPD2	7q-Amp	0.682	1
MLL4	Del_1p36.13	0.682	1
MR1	1p-Del	0.682	1
MR1	Amp_14q21.1	0.682	1
SDC1	Del_11p15.5	0.682	1
SDC1	Del_14q24.1	0.682	1
TFE3	1p-Del	0.682	1
TFE3	Amp_14q21.1	0.682	1
TGS1	7q-Amp	0.682	1
C1QTNF5	Del_6q15	0.683	1
PIK3R1	Del_12p13.1	0.683	1
MR1	Del_6q15	0.683	1
TFE3	Del_6q15	0.683	1
8p-Amp	9p-Del	0.683	1
Amp_10p15.1	Amp_17q12	0.683	1
HLA-DRB5	Del_5q21.3	0.684	1
RAB42	Del_5q21.3	0.684	1
RB1	Amp_1p22.3	0.684	1
THEM5	Del_8p23.2	0.684	1
ATXN2	11p-Del	0.684	1
CCL13	Del_5q21.3	0.684	1
OR2T35	Del_5q21.3	0.684	1
XBP1	Del_5q21.3	0.684	1
ZNF41	Del_8p23.2	0.684	1
IRS4	Del_8p23.2	0.684	1
MUC6	11p-Del	0.684	1
PAX2	Del_5q21.3	0.684	1
RBMX	11p-Del	0.684	1
RBMX	Del_9q34.2	0.684	1
RHBG	Del_5q21.3	0.684	1
RIBC1	Del_5q21.3	0.684	1
TTPAL	Del_5q21.3	0.684	1
ZBTB7C	Del_5q21.3	0.684	1
ARID1A	Del_12p13.1	0.685	1
CTCF	PCNXL2	0.685	1
EPDR1	MAP3K1	0.685	1
EPDR1	Amp_12p13.33	0.685	1
EPDR1	Del_9q21.11	0.685	1
HIST1H3B	Amp_10p15.1	0.685	1
MAP3K1	DLX6	0.685	1
MAP3K1	FXYD5	0.685	1
MAP3K1	SHISA4	0.685	1
MAP3K1	AKT2	0.685	1
MAP3K1	CDC42EP1	0.685	1
MAP3K1	MKL1	0.685	1
THEM5	Amp_10p15.1	0.685	1
DLX6	Amp_12p13.33	0.685	1
FBXO17	Amp_12p13.33	0.685	1
FBXO17	Del_9q21.11	0.685	1
FXYD5	Del_9q21.11	0.685	1
PPEF1	Amp_10p15.1	0.685	1
SHISA4	Amp_12p13.33	0.685	1
SHISA4	Del_9q21.11	0.685	1
AKT2	Amp_12p13.33	0.685	1
AKT2	Del_9q21.11	0.685	1
CDC42EP1	Amp_12p13.33	0.685	1
FGFR2	Amp_10p15.1	0.685	1
MKL1	Amp_12p13.33	0.685	1
MKL1	Del_9q21.11	0.685	1
NBPF9	Del_9q21.11	0.685	1
NF1	Del_12p13.1	0.685	1
8q-Amp	Del_9p23	0.685	1
4q-Del	Amp_17q12	0.685	1
APC	Del_7q36.1	0.686	1
SF3B1	Del_7q36.1	0.686	1
DNAH12	Del_7q36.1	0.686	1
FHOD3	13q-Del	0.686	1
MYH9	Amp_12q15	0.686	1
TGS1	13q-Del	0.686	1
ZMYM3	Amp_8p11.21	0.686	1
22q-Del	Amp_19q12	0.686	1
6q-Del	Del_5q21.3	0.686	1
Amp_4q13.3	Del_9q21.11	0.686	1
ASB10	Amp_3p25.1	0.687	1
FAM86B1	Amp_3p25.1	0.687	1
MAP3K1	TBX3	0.687	1
MLL3	Amp_11q14.1	0.687	1
PTEN	HRNR	0.687	1
RB1	1q-Amp	0.687	1
SMAD2	Del_12q23.1	0.687	1
SMAD2	Del_12q24.31	0.687	1
SMAD4	Del_12q23.1	0.687	1
ZFP36L2	Del_12q23.1	0.687	1
ZFP36L2	Del_12q24.31	0.687	1
CCNL2	Del_12q23.1	0.687	1
FXYD5	Amp_8p11.23	0.687	1
GRHL2	Del_7p22.3	0.687	1
GYG2	Amp_3p25.1	0.687	1
HRNR	Amp_15q26.3	0.687	1
MLC1	Amp_17q23.1	0.687	1
MORN1	Amp_3p25.1	0.687	1
MORN1	Del_7p22.3	0.687	1
OR4D10	Del_12q23.1	0.687	1
OR4D10	Del_12q24.31	0.687	1
SHISA4	Amp_8p11.23	0.687	1
ANKRD20A4	Del_12q23.1	0.687	1
ANKRD20A4	Del_12q24.31	0.687	1
CDC42EP1	Amp_8p11.23	0.687	1
MKL1	Amp_8p11.23	0.687	1
MR1	Del_12q23.1	0.687	1
MR1	Del_12q24.31	0.687	1
PSIP1	Del_7p22.3	0.687	1
TCP11	Amp_17q23.1	0.687	1
TPP2	Amp_3p25.1	0.687	1
USP36	Amp_3p25.1	0.687	1
USP36	Del_7p22.3	0.687	1
1q-Amp	Amp_14q21.1	0.687	1
4q-Del	Amp_1p22.3	0.687	1
Amp_1q21.3	Amp_11q14.1	0.687	1
Amp_6p23	Del_18q23	0.687	1
AARS	Amp_4q13.3	0.688	1
CBFB	Del_6q15	0.688	1
FAM20C	Del_11q23.3	0.688	1
HIST1H3B	MAP2K4	0.688	1
MAP2K4	PPEF1	0.688	1
MAP2K4	ZNF41	0.688	1
MAP2K4	FGFR2	0.688	1
NCOR1	ZFP36L1	0.688	1
NCOR1	HLA-C	0.688	1
NCOR1	NFE2L3	0.688	1
NCOR1	KCNN3	0.688	1
RAB42	Del_11q23.3	0.688	1
ZFP36L1	17q-Amp	0.688	1
HLA-C	17q-Amp	0.688	1
HLA-C	Amp_4q13.3	0.688	1
HRNR	Del_17p12	0.688	1
NFE2L3	Amp_4q13.3	0.688	1
OR2T35	Del_11q23.3	0.688	1
WDR52	17p-Del	0.688	1
XBP1	Del_11q23.3	0.688	1
KCNN3	Amp_4q13.3	0.688	1
KDM6A	17p-Del	0.688	1
OXCT2	Del_11q23.3	0.688	1
RHBG	Del_11q23.3	0.688	1
TTPAL	Del_11q23.3	0.688	1
ZNF362	Del_11q23.3	0.688	1
16p-Amp	Amp_1p22.3	0.688	1
7p-Amp	13q-Del	0.688	1
9q-Del	Amp_19q13.42	0.688	1
Amp_1q44	Del_6q27	0.688	1
Amp_6p23	Del_12p13.1	0.688	1
Amp_8p11.21	Del_9q34.2	0.688	1
Amp_13q34	Del_6q27	0.688	1
ACTL6B	PTEN	0.689	1
EPDR1	14q-Del	0.689	1
EPDR1	17q-Del	0.689	1
EPDR1	Amp_19q12	0.689	1
EPDR1	Del_21q11.2	0.689	1
PTEN	PTPN22	0.689	1
PTEN	PRICKLE3	0.689	1
PTEN	1q-Del	0.689	1
TBX3	WSCD2	0.689	1
TBX3	DLG1	0.689	1
TBX3	MLL4	0.689	1
COL6A5	7p-Amp	0.689	1
FBXO17	14q-Del	0.689	1
FBXO17	17q-Del	0.689	1
FBXO17	Amp_19q12	0.689	1
FBXO17	Del_21q11.2	0.689	1
FXYD5	14q-Del	0.689	1
FXYD5	Amp_19q12	0.689	1
SHISA4	14q-Del	0.689	1
SHISA4	Amp_19q12	0.689	1
AKT2	14q-Del	0.689	1
AKT2	17q-Del	0.689	1
AKT2	Amp_19q12	0.689	1
AKT2	Del_21q11.2	0.689	1
CDC42EP1	14q-Del	0.689	1
MKL1	14q-Del	0.689	1
MKL1	Amp_19q12	0.689	1
MKL1	Del_21q11.2	0.689	1
NBPF9	Amp_19q12	0.689	1
NBPF9	Del_21q11.2	0.689	1
7q-Amp	16p-Del	0.689	1
1p-Del	Amp_12p13.33	0.689	1
5q-Del	Del_6q15	0.689	1
Amp_10q22.3	Amp_12q15	0.689	1
Amp_10q22.3	Del_7q36.1	0.689	1
Amp_19q12	Del_17p12	0.689	1
FAM20C	Amp_6p23	0.69	1
HLA-DRB5	Amp_6p23	0.69	1
RAB42	Amp_6p23	0.69	1
RUNX1	Del_10q23.31	0.69	1
CCL13	Amp_6p23	0.69	1
OR2T35	Amp_6p23	0.69	1
XBP1	Amp_6p23	0.69	1
OXCT2	Amp_6p23	0.69	1
PAX2	Amp_6p23	0.69	1
RHBG	Amp_6p23	0.69	1
RIBC1	Amp_6p23	0.69	1
ZBTB7C	Amp_6p23	0.69	1
ZNF362	Amp_6p23	0.69	1
11q-Del	Amp_3p25.1	0.69	1
Amp_6p23	Del_11p15.5	0.69	1
Amp_6p23	Del_14q24.1	0.69	1
MLL3	RUNX1	0.691	1
ZFP36L1	Amp_8q24.21	0.691	1
NFE2L3	Amp_8q24.21	0.691	1
Amp_1q44	Del_9q34.2	0.691	1
AQP12A	5q-Del	0.692	1
HIST1H2BC	5q-Del	0.692	1
KRAS	5q-Del	0.692	1
MLL3	SF3B1	0.692	1
PTPN22	16p-Amp	0.692	1
TBL1XR1	16p-Amp	0.692	1
HRNR	Del_14q24.1	0.692	1
OR6C76	5q-Del	0.692	1
SPRR2B	Del_16q24.3	0.692	1
CABYR	5q-Del	0.692	1
CXCR3	5q-Del	0.692	1
RHOA	5q-Del	0.692	1
TARBP2	5q-Del	0.692	1
TCP11	5q-Del	0.692	1
16p-Amp	1q-Del	0.692	1
Amp_11q14.1	Del_12q24.31	0.692	1
APC	Del_19p13.3	0.693	1
C1QTNF5	Del_11q23.3	0.693	1
EPDR1	Amp_12q15	0.693	1
FAM20C	16q-Del	0.693	1
HLA-DRB5	16q-Del	0.693	1
PTHLH	Del_11q23.3	0.693	1
RAB42	16q-Del	0.693	1
ZFP36L2	Del_11q23.3	0.693	1
COL6A5	11p-Del	0.693	1
COL6A5	Del_13q14.2	0.693	1
DLX6	Amp_12q15	0.693	1
DLX6	Del_7q36.1	0.693	1
DNAH12	Del_19p13.3	0.693	1
DST	Amp_6q21	0.693	1
DST	Amp_11p13	0.693	1
FBXO17	Del_7q36.1	0.693	1
FXYD5	Amp_12q15	0.693	1
FXYD5	Del_7q36.1	0.693	1
MYH9	Del_19p13.3	0.693	1
OR2T35	16q-Del	0.693	1
OR4D10	Del_11q23.3	0.693	1
SHISA4	Del_7q36.1	0.693	1
AKT2	Amp_12q15	0.693	1
CDC42EP1	Del_7q36.1	0.693	1
NBPF9	Del_7q36.1	0.693	1
OXCT2	16q-Del	0.693	1
RHBG	16q-Del	0.693	1
ZBTB7C	16q-Del	0.693	1
1p-Del	Amp_13q34	0.693	1
6q-Del	Amp_11q14.1	0.693	1
Amp_3q26.32	Del_17p12	0.693	1
Del_7q36.1	Del_19p13.3	0.693	1
CBFB	FBXW7	0.694	1
CBFB	PIK3R1	0.694	1
CBFB	BCORL1	0.694	1
CTCF	Del_15q13.1	0.694	1
FOXA1	BCORL1	0.694	1
GATA3	Del_19q13.32	0.694	1
GPS2	Del_10q23.31	0.694	1
PIK3CA	CABYR	0.694	1
PIK3CA	CCDC82	0.694	1
PIK3CA	RHOA	0.694	1
PIK3CA	TARBP2	0.694	1
PIK3CA	TCP11	0.694	1
PIWIL1	Del_4q35.1	0.694	1
PIWIL1	Del_15q13.1	0.694	1
TAF1L	Del_4q35.1	0.694	1
TBX3	Amp_1p22.3	0.694	1
ANKRD12	Del_4q35.1	0.694	1
ERBB3	Del_15q13.1	0.694	1
SDC1	Del_15q13.1	0.694	1
TGS1	Del_6q15	0.694	1
FBXW7	4q-Del	0.695	1
GATA3	Amp_19q13.42	0.695	1
TBX3	17q-Del	0.695	1
TBX3	Amp_19q12	0.695	1
20q-Amp	Amp_1q44	0.695	1
5p-Amp	9p-Del	0.695	1
ACTL6B	Amp_11q14.1	0.696	1
CDKN1B	20q-Amp	0.696	1
EPDR1	MLL3	0.696	1
HIST1H3B	HRNR	0.696	1
MLL3	DLX6	0.696	1
MLL3	NBPF9	0.696	1
NCOR1	Amp_19q12	0.696	1
PTHLH	Amp_1q21.3	0.696	1
PTPN22	Amp_11q14.1	0.696	1
SMAD2	Amp_1q21.3	0.696	1
ATXN7L1	Amp_1q21.3	0.696	1
HRNR	PPEF1	0.696	1
HRNR	IRS4	0.696	1
ANGPT4	Amp_11q14.1	0.696	1
ATHL1	Amp_11q14.1	0.696	1
MR1	Amp_1q21.3	0.696	1
17q-Del	Amp_4q13.3	0.696	1
1q-Del	Amp_11q14.1	0.696	1
Amp_4q13.3	Amp_19q12	0.696	1
Amp_4q13.3	Del_21q11.2	0.696	1
ACTL6B	DST	0.697	1
C1QTNF5	Del_6q27	0.697	1
CTCF	PIK3CA	0.697	1
GATA3	RUNX1	0.697	1
PIK3CA	PIWIL1	0.697	1
PIK3R1	Amp_17q23.1	0.697	1
PTHLH	Del_6q27	0.697	1
ZFP36L2	Del_6q27	0.697	1
DST	PRICKLE3	0.697	1
DST	1q-Del	0.697	1
OR4D10	Del_6q27	0.697	1
ANKRD20A4	Del_6q27	0.697	1
MR1	Del_6q27	0.697	1
MUC6	8p-Del	0.697	1
RBMX	8p-Del	0.697	1
20p-Amp	Del_12q24.31	0.697	1
7q-Amp	Del_1p36.13	0.697	1
Amp_1p22.3	Del_7p22.3	0.697	1
Amp_15q26.3	Del_7p22.3	0.697	1
CTCF	ERBB2	0.698	1
CTCF	DOCK11	0.698	1
GATA3	GPS2	0.698	1
GATA3	GPRIN2	0.698	1
GATA3	ZNF41	0.698	1
GATA3	FGFR2	0.698	1
GATA3	IRS4	0.698	1
GPS2	9p-Del	0.698	1
GPS2	Del_10q26.3	0.698	1
HIST1H3B	9p-Del	0.698	1
MYB	20p-Amp	0.698	1
PIWIL1	DOCK11	0.698	1
FHOD3	20p-Amp	0.698	1
GPRIN2	9p-Del	0.698	1
GPRIN2	Del_10q26.3	0.698	1
PPEF1	9p-Del	0.698	1
DLG1	Del_3p21.31	0.698	1
DOCK11	TNRC6B	0.698	1
FGFR2	Del_10q26.3	0.698	1
IRS4	Del_10q26.3	0.698	1
MLL4	Del_9p21.3	0.698	1
ZNF687	9p-Del	0.698	1
ARID1A	DLG1	0.699	1
ASB10	Amp_19p13.12	0.699	1
CTCF	13q-Del	0.699	1
PIWIL1	13q-Del	0.699	1
TAF1L	13q-Del	0.699	1
TCP10	Amp_19p13.12	0.699	1
ZFP36L1	Del_19p13.3	0.699	1
ANKRD12	13q-Del	0.699	1
COL6A5	Amp_3p25.1	0.699	1
FHOD3	17p-Del	0.699	1
GRHL2	Amp_19p13.12	0.699	1
GYG2	Amp_19p13.12	0.699	1
MORN1	Amp_19p13.12	0.699	1
C15orf39	Amp_19p13.12	0.699	1
DLG1	NF1	0.699	1
KCNN3	Del_19p13.3	0.699	1
SPEN	16q-Del	0.699	1
CASP8	RUNX1	0.7	1
MAP3K1	Del_6p25.3	0.7	1
MYB	RUNX1	0.7	1
PTHLH	16q-Del	0.7	1
RUNX1	UBC	0.7	1
RUNX1	FRMPD2	0.7	1
SMAD2	16q-Del	0.7	1
SMAD4	16q-Del	0.7	1
TBX3	17q-Amp	0.7	1
TBX3	Amp_4q13.3	0.7	1
COL6A5	MED23	0.7	1
OR4D10	16q-Del	0.7	1
ANKRD20A4	16q-Del	0.7	1
EIF4A2	Amp_1q44	0.7	1
KCNN3	Amp_1q44	0.7	1
20p-Amp	Amp_1p22.3	0.7	1
FBXW7	MAP3K1	0.701	1
MAP3K1	PIK3R1	0.701	1
MAP3K1	BCORL1	0.701	1
RB1	11q-Del	0.701	1
ATXN2	Del_6p25.3	0.701	1
GRHL2	8q-Amp	0.701	1
BCORL1	Amp_12p13.33	0.701	1
BCORL1	Del_9q21.11	0.701	1
PSIP1	8q-Amp	0.701	1
Amp_1p22.3	Del_11p15.5	0.701	1
AQP12A	5p-Amp	0.702	1
AQP12A	Amp_6q21	0.702	1
AQP12A	Amp_19q13.42	0.702	1
HIST1H2BC	5p-Amp	0.702	1
HIST1H2BC	Amp_6q21	0.702	1
HIST1H2BC	Amp_11p13	0.702	1
HIST1H2BC	Amp_19q13.42	0.702	1
KRAS	5p-Amp	0.702	1
KRAS	Amp_6q21	0.702	1
KRAS	Amp_11p13	0.702	1
KRAS	Amp_19q13.42	0.702	1
ICOSLG	5p-Amp	0.702	1
ICOSLG	Amp_6q21	0.702	1
ICOSLG	Amp_19q13.42	0.702	1
MLC1	5p-Amp	0.702	1
MLC1	Amp_6q21	0.702	1
MLC1	Amp_19q13.42	0.702	1
OR6C76	5p-Amp	0.702	1
OR6C76	Amp_6q21	0.702	1
OR6C76	Amp_11p13	0.702	1
OR6C76	Amp_19q13.42	0.702	1
CABYR	Amp_6q21	0.702	1
CABYR	Amp_11p13	0.702	1
CABYR	Amp_19q13.42	0.702	1
CCDC82	5p-Amp	0.702	1
CCDC82	Amp_6q21	0.702	1
CCDC82	Amp_19q13.42	0.702	1
CEP57	5p-Amp	0.702	1
CEP57	Amp_6q21	0.702	1
CEP57	Amp_11p13	0.702	1
CEP57	Amp_19q13.42	0.702	1
CXCR3	5p-Amp	0.702	1
CXCR3	Amp_6q21	0.702	1
RHOA	5p-Amp	0.702	1
RHOA	Amp_6q21	0.702	1
RHOA	Amp_11p13	0.702	1
RHOA	Amp_19q13.42	0.702	1
SDC1	16p-Amp	0.702	1
TARBP2	Amp_11p13	0.702	1
TARBP2	Amp_19q13.42	0.702	1
TCP11	Amp_6q21	0.702	1
TCP11	Amp_11p13	0.702	1
TCP11	Amp_19q13.42	0.702	1
7q-Amp	Amp_11q13.3	0.702	1
Amp_12q15	Del_1p22.1	0.702	1
AARS	Amp_11q13.3	0.703	1
APC	Del_11p15.5	0.703	1
HIST1H3B	4p-Del	0.703	1
MYB	Del_5q21.3	0.703	1
RB1	Amp_6q21	0.703	1
SF3B1	Del_14q24.1	0.703	1
TBX3	Amp_12q15	0.703	1
THEM5	4p-Del	0.703	1
ZFP36L1	Amp_11q13.3	0.703	1
DNAH12	Del_14q24.1	0.703	1
HLA-C	Amp_11q13.3	0.703	1
PPEF1	4p-Del	0.703	1
WDR52	Del_11p15.5	0.703	1
EIF4A2	Amp_11q13.3	0.703	1
FGFR2	4p-Del	0.703	1
FRMPD2	Del_5q21.3	0.703	1
KDM6A	Del_11p15.5	0.703	1
TGS1	Del_5q21.3	0.703	1
20p-Amp	Del_4q35.1	0.703	1
Amp_1p22.3	Amp_12p13.33	0.703	1
Amp_8p11.21	Del_7q36.1	0.703	1
EPDR1	9q-Del	0.704	1
FBXW7	Del_16q24.3	0.704	1
HIST1H3B	7q-Amp	0.704	1
PIK3R1	Del_16q24.3	0.704	1
THEM5	SPEN	0.704	1
FBXO17	15q-Del	0.704	1
FBXO17	9q-Del	0.704	1
FBXO17	Del_20p13	0.704	1
FXYD5	9q-Del	0.704	1
FXYD5	Del_20p13	0.704	1
GPRIN2	SPEN	0.704	1
GPRIN2	7q-Amp	0.704	1
PPEF1	7q-Amp	0.704	1
SHISA4	9q-Del	0.704	1
SHISA4	Del_20p13	0.704	1
SPRR2B	Amp_11q14.1	0.704	1
ZNF41	7q-Amp	0.704	1
AKT2	15q-Del	0.704	1
AKT2	9q-Del	0.704	1
AKT2	Del_20p13	0.704	1
ATHL1	Del_11q23.3	0.704	1
CDC42EP1	9q-Del	0.704	1
CDC42EP1	Del_20p13	0.704	1
MKL1	15q-Del	0.704	1
MKL1	9q-Del	0.704	1
MKL1	Del_20p13	0.704	1
NBPF9	9q-Del	0.704	1
NBPF9	Del_20p13	0.704	1
SDC1	20q-Amp	0.704	1
SDC1	Amp_11q14.1	0.704	1
ZNF687	7q-Amp	0.704	1
CDKN1B	Del_4p16.3	0.705	1
PTEN	Amp_1p22.3	0.705	1
SF3B1	15q-Del	0.705	1
SF3B1	Del_20p13	0.705	1
TBL1XR1	Del_4p16.3	0.705	1
DNAH12	9q-Del	0.705	1
DNAH12	Del_20p13	0.705	1
DST	11p-Del	0.705	1
PRICKLE3	Del_4p16.3	0.705	1
WDR52	15q-Del	0.705	1
WDR52	Del_20p13	0.705	1
ANGPT4	Del_4p16.3	0.705	1
ANGPT4	Del_5q11.2	0.705	1
DLG1	11q-Del	0.705	1
KDM6A	15q-Del	0.705	1
MLL4	11q-Del	0.705	1
SPEN	Amp_15q26.3	0.705	1
20p-Amp	Del_6q27	0.705	1
4p-Del	Amp_19q13.42	0.705	1
CTCF	Amp_15q26.3	0.706	1
PIWIL1	Amp_15q26.3	0.706	1
ABCA8	Del_9p23	0.706	1
DST	Amp_17q23.1	0.706	1
17q-Amp	Amp_1q21.3	0.706	1
AARS	Del_11p15.5	0.707	1
APC	Del_8p23.2	0.707	1
FBXW7	14q-Del	0.707	1
FBXW7	Amp_19q12	0.707	1
GATA3	RB1	0.707	1
GPS2	18p-Del	0.707	1
PIK3R1	Amp_19q12	0.707	1
PIK3R1	Del_21q11.2	0.707	1
THEM5	18p-Del	0.707	1
VCPIP1	Del_11p15.5	0.707	1
VCPIP1	Del_14q24.1	0.707	1
WSCD2	Amp_11q13.3	0.707	1
ABCA8	Del_21q11.2	0.707	1
HLA-C	Del_11p15.5	0.707	1
HLA-C	Del_14q24.1	0.707	1
NFE2L3	Del_14q24.1	0.707	1
PPEF1	18p-Del	0.707	1
BCORL1	Amp_19q12	0.707	1
BCORL1	Del_21q11.2	0.707	1
FGFR2	18p-Del	0.707	1
Amp_1q44	Del_14q24.1	0.707	1
AARS	16p-Del	0.708	1
ARID1A	Del_9q21.11	0.708	1
CASP8	Del_13q14.2	0.708	1
CTCF	Del_6q15	0.708	1
PIK3CA	22q-Del	0.708	1
RUNX1	9q-Del	0.708	1
VCPIP1	16p-Del	0.708	1
ZFP36L1	16p-Del	0.708	1
HLA-C	16p-Del	0.708	1
NFE2L3	16p-Del	0.708	1
UBC	Del_13q14.2	0.708	1
EIF4A2	16p-Del	0.708	1
KCNN3	16p-Del	0.708	1
Amp_8p11.23	Amp_12p13.33	0.708	1
Amp_19q13.42	Del_9p21.3	0.708	1
ACTL6B	CDH1	0.709	1
C1QTNF5	Del_1p36.13	0.709	1
CASP8	TBX3	0.709	1
CDH1	CDKN1B	0.709	1
ERBB2	Amp_1q44	0.709	1
HLA-DRB5	Del_2q37.3	0.709	1
PTHLH	Del_19q13.32	0.709	1
RAB42	Del_2q37.3	0.709	1
SMAD2	Del_1p36.13	0.709	1
SMAD2	Del_19q13.32	0.709	1
SMAD4	Del_1p36.13	0.709	1
SMAD4	Del_19q13.32	0.709	1
TBX3	UBC	0.709	1
AKD1	Del_1p36.13	0.709	1
ATXN7L1	Del_19q13.32	0.709	1
CCL13	Del_2q37.3	0.709	1
CCNL2	Del_19q13.32	0.709	1
OR2T35	Del_2q37.3	0.709	1
OR4D10	Del_1p36.13	0.709	1
SPRR2B	Del_5q11.2	0.709	1
XBP1	Del_2q37.3	0.709	1
ANGPT4	Del_1p22.1	0.709	1
ANKRD20A4	Del_1p36.13	0.709	1
ATHL1	Del_16q24.3	0.709	1
MR1	Del_1p36.13	0.709	1
MR1	Del_19q13.32	0.709	1
OXCT2	Del_2q37.3	0.709	1
PAX2	Del_2q37.3	0.709	1
RHBG	Del_2q37.3	0.709	1
RIBC1	Del_2q37.3	0.709	1
SDC1	Del_5q11.2	0.709	1
SPEN	20p-Amp	0.709	1
TFE3	Del_1p36.13	0.709	1
TTPAL	Del_2q37.3	0.709	1
ZBTB7C	Del_2q37.3	0.709	1
ZNF362	Del_2q37.3	0.709	1
20p-Amp	17q-Del	0.709	1
CTCF	RB1	0.71	1
EPDR1	Amp_11q13.3	0.71	1
PIWIL1	RB1	0.71	1
RB1	ERBB3	0.71	1
RB1	TNRC6B	0.71	1
WSCD2	Del_2q37.3	0.71	1
FBXO17	Amp_11q13.3	0.71	1
CASZ1	Del_2q37.3	0.71	1
CDC42EP1	Amp_11q13.3	0.71	1
MKL1	Amp_11q13.3	0.71	1
NBPF9	Amp_11q13.3	0.71	1
17p-Del	Amp_4q13.3	0.71	1
Amp_4q13.3	Del_6q15	0.71	1
Amp_10p15.1	Amp_17q23.1	0.71	1
AQP12A	Amp_13q34	0.711	1
CBFB	MED23	0.711	1
CBFB	ZMYM3	0.711	1
CDKN1B	22q-Del	0.711	1
FAM86B1	Amp_10q22.3	0.711	1
FOXA1	MED23	0.711	1
HIST1H2BC	Amp_13q34	0.711	1
KRAS	Amp_13q34	0.711	1
PIK3CA	RBMX	0.711	1
PTPN22	22q-Del	0.711	1
RUNX1	18p-Del	0.711	1
TCP10	Amp_10q22.3	0.711	1
AKD1	Amp_20q13.2	0.711	1
GRHL2	Amp_10q22.3	0.711	1
GYG2	Amp_10q22.3	0.711	1
ICOSLG	Amp_13q34	0.711	1
MLC1	Amp_13q34	0.711	1
MORN1	Amp_10q22.3	0.711	1
OR6C76	Amp_13q34	0.711	1
C15orf39	Amp_10q22.3	0.711	1
CABYR	Amp_13q34	0.711	1
CCDC82	Amp_13q34	0.711	1
CEP57	Amp_13q34	0.711	1
PSIP1	Amp_10q22.3	0.711	1
RHOA	Amp_13q34	0.711	1
SLC35B2	Amp_10q22.3	0.711	1
TARBP2	Amp_13q34	0.711	1
TCP11	Amp_13q34	0.711	1
USP36	Amp_10q22.3	0.711	1
1p-Del	Amp_12q15	0.711	1
ACTL6B	MAP2K4	0.712	1
CDH1	SPRR2B	0.712	1
CDH1	SDC1	0.712	1
CDKN1B	16q-Del	0.712	1
GPS2	18q-Del	0.712	1
HIST1H3B	8p-Amp	0.712	1
MAP2K4	TBL1XR1	0.712	1
MAP2K4	PRICKLE3	0.712	1
MAP2K4	ANGPT4	0.712	1
MAP2K4	ATHL1	0.712	1
MYB	Del_6q27	0.712	1
PTPN22	16q-Del	0.712	1
THEM5	8p-Amp	0.712	1
THEM5	18q-Del	0.712	1
TP53	ABCA8	0.712	1
TP53	BCORL1	0.712	1
ATXN2	Del_12p13.1	0.712	1
FHOD3	Del_6q27	0.712	1
GPRIN2	8p-Amp	0.712	1
SPRR2B	Del_1p22.1	0.712	1
ZNF41	8p-Amp	0.712	1
ANGPT4	16q-Del	0.712	1
IRS4	8p-Amp	0.712	1
CTCF	Amp_11q13.3	0.713	1
ERBB2	SF3B1	0.713	1
ERBB2	MYH9	0.713	1
ERBB2	Amp_14q21.1	0.713	1
FAM20C	11p-Del	0.713	1
FAM20C	Del_9q34.2	0.713	1
FBXW7	Amp_12q15	0.713	1
FBXW7	Del_7q36.1	0.713	1
HLA-DRB5	11p-Del	0.713	1
HLA-DRB5	Del_9q34.2	0.713	1
MLL3	17p-Del	0.713	1
MYB	Amp_6p23	0.713	1
PIWIL1	Amp_11q13.3	0.713	1
RAB42	11p-Del	0.713	1
RAB42	Del_9q34.2	0.713	1
SF3B1	DOCK11	0.713	1
CCL13	11p-Del	0.713	1
CCL13	Del_9q34.2	0.713	1
DST	7q-Amp	0.713	1
ERBB3	Amp_11q13.3	0.713	1
MYH9	DOCK11	0.713	1
OR2T35	11p-Del	0.713	1
OR2T35	Del_9q34.2	0.713	1
UBC	Amp_6p23	0.713	1
XBP1	11p-Del	0.713	1
XBP1	Del_9q34.2	0.713	1
DOCK11	KDM6A	0.713	1
DOCK11	Amp_14q21.1	0.713	1
FRMPD2	Amp_6p23	0.713	1
PAX2	11p-Del	0.713	1
RIBC1	11p-Del	0.713	1
RIBC1	Del_9q34.2	0.713	1
TTPAL	11p-Del	0.713	1
TTPAL	Del_9q34.2	0.713	1
ZBTB7C	11p-Del	0.713	1
ZBTB7C	Del_9q34.2	0.713	1
ZNF362	11p-Del	0.713	1
ZNF362	Del_9q34.2	0.713	1
7p-Amp	Amp_10q22.3	0.713	1
C1QTNF5	7p-Amp	0.714	1
SMAD2	7p-Amp	0.714	1
TAF1L	20q-Amp	0.714	1
ZFP36L2	7p-Amp	0.714	1
ATXN7L1	7p-Amp	0.714	1
CCNL2	7p-Amp	0.714	1
HRNR	Amp_8p11.21	0.714	1
OR4D10	7p-Amp	0.714	1
ANKRD20A4	7p-Amp	0.714	1
MR1	7p-Amp	0.714	1
TFE3	7p-Amp	0.714	1
20q-Amp	Amp_10p15.1	0.714	1
5p-Amp	Del_4q35.1	0.714	1
5p-Amp	Del_18q23	0.714	1
7p-Amp	Del_14q24.1	0.714	1
8p-Amp	9q-Del	0.714	1
18p-Del	Amp_19q13.42	0.714	1
Amp_10p15.1	Amp_11q14.1	0.714	1
Amp_11q13.3	Amp_19q12	0.714	1
Amp_19q13.42	Del_18q23	0.714	1
ARID1A	Amp_4q13.3	0.715	1
MLL3	17q-Amp	0.715	1
PTEN	ZFP36L1	0.715	1
PTEN	HLA-C	0.715	1
PTEN	NFE2L3	0.715	1
PTEN	KCNN3	0.715	1
SF3B1	Amp_17q12	0.715	1
WSCD2	11p-Del	0.715	1
WSCD2	Del_9q34.2	0.715	1
CASZ1	11p-Del	0.715	1
CASZ1	Del_9q34.2	0.715	1
DLG1	11p-Del	0.715	1
DLG1	Del_9q34.2	0.715	1
FGFR2	Amp_17q12	0.715	1
IRS4	Amp_17q12	0.715	1
MLL4	Del_9q34.2	0.715	1
MLL4	Del_11q23.3	0.715	1
NF1	17q-Amp	0.715	1
NF1	Amp_4q13.3	0.715	1
17q-Amp	Del_19q13.32	0.715	1
8q-Amp	Amp_15q26.3	0.715	1
Amp_1q44	Del_6p25.3	0.715	1
Amp_19q12	Del_12q23.1	0.715	1
Amp_19q12	Del_18q23	0.715	1
Del_6p25.3	Del_19q13.32	0.715	1
Del_12q24.31	Del_21q11.2	0.715	1
ARID1A	14q-Del	0.716	1
ARID1A	17q-Del	0.716	1
FBXW7	8q-Amp	0.716	1
FOXA1	Amp_3p25.1	0.716	1
GPS2	6q-Del	0.716	1
HIST1H3B	6q-Del	0.716	1
MLL3	Amp_1q21.3	0.716	1
PPEF1	6q-Del	0.716	1
BCORL1	PCNXL2	0.716	1
FGFR2	6q-Del	0.716	1
IRS4	6q-Del	0.716	1
ZNF687	6q-Del	0.716	1
7q-Amp	Del_5q21.3	0.716	1
8p-Amp	Del_1p22.1	0.716	1
ACTL6B	Amp_17q23.1	0.717	1
ASB10	NCOR1	0.717	1
ASB10	17q-Amp	0.717	1
ASB10	Amp_4q13.3	0.717	1
FAM86B1	NCOR1	0.717	1
NCOR1	MORN1	0.717	1
NCOR1	C15orf39	0.717	1
NCOR1	SLC35B2	0.717	1
NCOR1	USP36	0.717	1
PTPN22	Amp_3q26.32	0.717	1
TBL1XR1	Amp_17q23.1	0.717	1
TBX3	17p-Del	0.717	1
TCP10	17q-Amp	0.717	1
TCP10	Amp_4q13.3	0.717	1
AKD1	Amp_1q21.3	0.717	1
GRHL2	17q-Amp	0.717	1
GYG2	Amp_4q13.3	0.717	1
MORN1	Amp_4q13.3	0.717	1
C15orf39	17q-Amp	0.717	1
C15orf39	Amp_4q13.3	0.717	1
PSIP1	Amp_4q13.3	0.717	1
SDC1	Amp_3q26.32	0.717	1
SLC35B2	17q-Amp	0.717	1
SLC35B2	Amp_4q13.3	0.717	1
5p-Amp	Del_9q34.2	0.717	1
11p-Del	Amp_6q21	0.717	1
11p-Del	Amp_11p13	0.717	1
1p-Del	Amp_14q21.1	0.717	1
5q-Del	Amp_8p11.23	0.717	1
ARID1A	FRMPD2	0.718	1
CASP8	NF1	0.718	1
CDH1	Del_12q23.1	0.718	1
MYB	NF1	0.718	1
NCOR1	Del_4q35.1	0.718	1
NCOR1	Del_15q13.1	0.718	1
PTEN	Amp_14q21.1	0.718	1
RUNX1	16p-Del	0.718	1
FHOD3	NF1	0.718	1
GYG2	Del_18q23	0.718	1
HLA-C	Amp_1q21.3	0.718	1
MORN1	Del_18q23	0.718	1
USP36	Del_18q23	0.718	1
17q-Amp	Del_4q35.1	0.718	1
Del_6q15	Del_12q23.1	0.718	1
ARID1A	Amp_1p22.3	0.719	1
ASB10	17p-Del	0.719	1
FAM86B1	17p-Del	0.719	1
MLL3	BCORL1	0.719	1
TP53	Del_17p12	0.719	1
WSCD2	COL6A5	0.719	1
COL6A5	DLG1	0.719	1
GRHL2	17p-Del	0.719	1
GYG2	17p-Del	0.719	1
PPEF1	Amp_1q44	0.719	1
SPRR2B	Amp_1p22.3	0.719	1
ZNF41	Amp_1q44	0.719	1
C15orf39	17p-Del	0.719	1
FGFR2	Amp_1q44	0.719	1
SDC1	Amp_1p22.3	0.719	1
SLC35B2	17p-Del	0.719	1
ACTL6B	HRNR	0.72	1
C1QTNF5	Amp_3p25.1	0.72	1
C1QTNF5	Del_7p22.3	0.72	1
CDKN1B	HRNR	0.72	1
PTHLH	Del_7p22.3	0.72	1
PTPN22	HRNR	0.72	1
SMAD2	Amp_3p25.1	0.72	1
SMAD4	Amp_3p25.1	0.72	1
SMAD4	Del_7p22.3	0.72	1
TBL1XR1	HRNR	0.72	1
ZFP36L2	Amp_3p25.1	0.72	1
ZFP36L2	Del_7p22.3	0.72	1
AKD1	Amp_10p15.1	0.72	1
ATXN7L1	Amp_3p25.1	0.72	1
ATXN7L1	Del_7p22.3	0.72	1
CCNL2	Del_7p22.3	0.72	1
DLX6	Amp_15q26.3	0.72	1
FBXO17	Amp_15q26.3	0.72	1
GRHL2	Del_8p23.2	0.72	1
HRNR	PRICKLE3	0.72	1
HRNR	ANGPT4	0.72	1
HRNR	ATHL1	0.72	1
OR4D10	Amp_3p25.1	0.72	1
OR4D10	Del_7p22.3	0.72	1
AKT2	Amp_15q26.3	0.72	1
ANKRD20A4	Amp_3p25.1	0.72	1
ANKRD20A4	Del_7p22.3	0.72	1
MR1	Amp_3p25.1	0.72	1
MR1	Del_7p22.3	0.72	1
SLC35B2	Del_8p23.2	0.72	1
TFE3	Amp_3p25.1	0.72	1
TFE3	Del_7p22.3	0.72	1
16p-Amp	Amp_10q22.3	0.72	1
1q-Amp	Del_12q24.31	0.72	1
8q-Amp	17p-Del	0.72	1
Amp_13q34	Del_10q23.31	0.72	1
ACTL6B	Amp_1p22.3	0.721	1
APC	Amp_8p11.23	0.721	1
AQP12A	1p-Del	0.721	1
C1QTNF5	Del_3p21.31	0.721	1
C1QTNF5	Del_9p21.3	0.721	1
ERBB2	Del_12q23.1	0.721	1
ERBB2	Del_12q24.31	0.721	1
FAM86B1	Del_17q21.31	0.721	1
FOXA1	17p-Del	0.721	1
GPS2	RUNX1	0.721	1
HIST1H2BC	1p-Del	0.721	1
HIST1H2BC	Amp_14q21.1	0.721	1
KRAS	1p-Del	0.721	1
KRAS	Amp_14q21.1	0.721	1
MAP3K1	Amp_15q26.3	0.721	1
PTEN	Del_1p36.13	0.721	1
RUNX1	THEM5	0.721	1
RUNX1	GPRIN2	0.721	1
RUNX1	ZNF41	0.721	1
RUNX1	FGFR2	0.721	1
RUNX1	IRS4	0.721	1
RUNX1	ZNF687	0.721	1
SF3B1	Amp_8p11.23	0.721	1
SMAD4	Del_3p21.31	0.721	1
ZFP36L2	Del_9p21.3	0.721	1
ATXN7L1	Del_3p21.31	0.721	1
GRHL2	Del_17q21.31	0.721	1
GYG2	Del_17q21.31	0.721	1
ICOSLG	Amp_14q21.1	0.721	1
MLC1	Amp_14q21.1	0.721	1
MORN1	Del_17q21.31	0.721	1
OR4D10	Del_3p21.31	0.721	1
OR4D10	Del_9p21.3	0.721	1
OR6C76	1p-Del	0.721	1
OR6C76	Amp_14q21.1	0.721	1
PRICKLE3	Amp_1p22.3	0.721	1
ANGPT4	Amp_1p22.3	0.721	1
ANKRD20A4	Del_9p21.3	0.721	1
C15orf39	Del_17q21.31	0.721	1
CABYR	Amp_14q21.1	0.721	1
CCDC82	1p-Del	0.721	1
CCDC82	Amp_14q21.1	0.721	1
CEP57	1p-Del	0.721	1
CEP57	Amp_14q21.1	0.721	1
CXCR3	1p-Del	0.721	1
MR1	Del_3p21.31	0.721	1
RHOA	1p-Del	0.721	1
RHOA	Amp_14q21.1	0.721	1
TARBP2	1p-Del	0.721	1
TCP11	1p-Del	0.721	1
TFE3	Del_9p21.3	0.721	1
TPP2	Del_17q21.31	0.721	1
16p-Amp	Del_8p23.2	0.721	1
7p-Amp	8p-Del	0.721	1
AARS	TP53	0.722	1
FBXW7	Del_17p12	0.722	1
HLA-DRB5	Del_6p25.3	0.722	1
MLL3	Amp_14q21.1	0.722	1
RAB42	Del_6p25.3	0.722	1
TP53	HLA-C	0.722	1
TP53	EIF4A2	0.722	1
ZFP36L1	DST	0.722	1
ABCA8	Del_17p12	0.722	1
CCL13	Del_6p25.3	0.722	1
DST	KCNN3	0.722	1
OR2T35	Del_6p25.3	0.722	1
SPRR2B	Amp_10p15.1	0.722	1
XBP1	Del_6p25.3	0.722	1
OXCT2	Del_6p25.3	0.722	1
RHBG	Del_6p25.3	0.722	1
RIBC1	Del_6p25.3	0.722	1
SDC1	Amp_10p15.1	0.722	1
ZBTB7C	Del_6p25.3	0.722	1
ZNF362	Del_6p25.3	0.722	1
ARID1A	Amp_12q15	0.723	1
CTCF	AKD1	0.723	1
ATXN2	4q-Del	0.723	1
HRNR	5q-Del	0.723	1
NF1	Amp_12q15	0.723	1
ZMYM3	4q-Del	0.723	1
20p-Amp	11p-Del	0.723	1
MAP3K1	Del_12p13.1	0.724	1
PIWIL1	Del_5q11.2	0.724	1
RB1	8p-Amp	0.724	1
RUNX1	6q-Del	0.724	1
TAF1L	Del_4p16.3	0.724	1
WSCD2	16q-Del	0.724	1
FHOD3	Del_17p12	0.724	1
MLL4	16q-Del	0.724	1
TNRC6B	Del_4p16.3	0.724	1
8p-Amp	Amp_6q21	0.724	1
18q-Del	Amp_11p13	0.724	1
18q-Del	Amp_19q13.42	0.724	1
6q-Del	Del_20p13	0.724	1
ACTL6B	Amp_10p15.1	0.725	1
AQP12A	Del_12q24.31	0.725	1
CDKN1B	Amp_10p15.1	0.725	1
HIST1H2BC	Del_12q23.1	0.725	1
HIST1H2BC	Del_12q24.31	0.725	1
KRAS	Del_12q23.1	0.725	1
KRAS	Del_12q24.31	0.725	1
MAP2K4	Amp_19q13.42	0.725	1
RB1	SF3B1	0.725	1
RB1	MYH9	0.725	1
VCPIP1	Del_4q35.1	0.725	1
AKD1	Amp_6q21	0.725	1
HRNR	Del_4q35.1	0.725	1
HRNR	Del_15q13.1	0.725	1
MLC1	Del_12q23.1	0.725	1
NFE2L3	Del_4q35.1	0.725	1
NFE2L3	Del_15q13.1	0.725	1
OR6C76	Del_12q23.1	0.725	1
OR6C76	Del_12q24.31	0.725	1
PRICKLE3	Amp_10p15.1	0.725	1
CABYR	Del_12q23.1	0.725	1
CABYR	Del_12q24.31	0.725	1
CCDC82	Del_12q23.1	0.725	1
CEP57	Del_12q23.1	0.725	1
CEP57	Del_12q24.31	0.725	1
CXCR3	Del_12q23.1	0.725	1
CXCR3	Del_12q24.31	0.725	1
EIF4A2	Del_4q35.1	0.725	1
EIF4A2	Del_15q13.1	0.725	1
NF1	Amp_10p15.1	0.725	1
RHOA	Del_12q23.1	0.725	1
TARBP2	Del_12q23.1	0.725	1
TARBP2	Del_12q24.31	0.725	1
TCP11	Del_12q23.1	0.725	1
Amp_6p23	Del_12q23.1	0.725	1
Amp_6p23	Del_12q24.31	0.725	1
Amp_10q22.3	Del_7p22.3	0.725	1
Amp_19q12	Del_17q21.31	0.725	1
ASB10	Del_13q14.2	0.726	1
C1QTNF5	11q-Del	0.726	1
PTHLH	11q-Del	0.726	1
SMAD4	11q-Del	0.726	1
ZFP36L1	Del_22q13.32	0.726	1
GRHL2	Del_13q14.2	0.726	1
HRNR	Amp_1q44	0.726	1
MYH9	Del_11q23.3	0.726	1
NFE2L3	Del_22q13.32	0.726	1
WDR52	Del_11q23.3	0.726	1
EIF4A2	Del_22q13.32	0.726	1
20q-Amp	Del_14q24.1	0.726	1
Amp_15q26.3	Del_6q15	0.726	1
ACTL6B	SPEN	0.727	1
CASP8	Del_1p36.13	0.727	1
CDKN1B	7q-Amp	0.727	1
PTEN	Del_13q14.2	0.727	1
PTPN22	7q-Amp	0.727	1
TBL1XR1	7q-Amp	0.727	1
FHOD3	Del_1p36.13	0.727	1
PRICKLE3	SPEN	0.727	1
SPRR2B	Del_10q23.31	0.727	1
FRMPD2	Del_1p36.13	0.727	1
SDC1	Del_8p23.2	0.727	1
SDC1	Del_10q23.31	0.727	1
7q-Amp	1q-Del	0.727	1
Amp_4q13.3	Del_5q21.3	0.727	1
Amp_11q13.3	Del_4p16.3	0.727	1
AQP12A	Amp_17q12	0.728	1
ERBB2	ABCA8	0.728	1
ERBB2	BCORL1	0.728	1
HIST1H2BC	Amp_17q12	0.728	1
PIK3R1	Del_19p13.3	0.728	1
PTEN	Del_12q24.31	0.728	1
FXYD5	Del_22q13.32	0.728	1
ICOSLG	Amp_17q12	0.728	1
MLC1	Amp_17q12	0.728	1
OR6C76	Amp_17q12	0.728	1
SHISA4	Del_22q13.32	0.728	1
AKT2	Del_22q13.32	0.728	1
BCORL1	DOCK11	0.728	1
CXCR3	Amp_17q12	0.728	1
MKL1	Del_22q13.32	0.728	1
17q-Del	Amp_10p15.1	0.728	1
Amp_1q44	Del_9q21.11	0.728	1
Amp_10p15.1	Del_21q11.2	0.728	1
ARID1A	Del_22q13.32	0.729	1
CBFB	WSCD2	0.729	1
CBFB	DLG1	0.729	1
CBFB	MLL4	0.729	1
CDH1	PIWIL1	0.729	1
CTCF	Del_6q27	0.729	1
FAM20C	Del_12p13.1	0.729	1
FOXA1	WSCD2	0.729	1
FOXA1	DLG1	0.729	1
GATA3	SPRR2B	0.729	1
GATA3	SDC1	0.729	1
HIST1H3B	PIK3CA	0.729	1
HLA-DRB5	Del_12p13.1	0.729	1
MAP3K1	RBMX	0.729	1
PIK3CA	GPRIN2	0.729	1
PIK3CA	PPEF1	0.729	1
PIK3CA	IRS4	0.729	1
PTEN	RUNX1	0.729	1
RAB42	Del_12p13.1	0.729	1
VCPIP1	Amp_8p11.21	0.729	1
VCPIP1	Del_17p12	0.729	1
ATXN2	Amp_12p13.33	0.729	1
ATXN2	Del_9q21.11	0.729	1
CCL13	Del_12p13.1	0.729	1
NFE2L3	Amp_8p11.21	0.729	1
NFE2L3	Del_17p12	0.729	1
SPRR2B	9p-Del	0.729	1
SPRR2B	Del_10q26.3	0.729	1
KCNN3	Amp_8p11.21	0.729	1
OXCT2	Del_12p13.1	0.729	1
PAX2	Del_12p13.1	0.729	1
RBMX	Del_9q21.11	0.729	1
RIBC1	Del_12p13.1	0.729	1
SDC1	9p-Del	0.729	1
SDC1	Del_10q26.3	0.729	1
TTPAL	Del_12p13.1	0.729	1
ZBTB7C	Del_12p13.1	0.729	1
ZMYM3	Amp_12p13.33	0.729	1
ZNF362	Del_12p13.1	0.729	1
7p-Amp	18p-Del	0.729	1
9p-Del	Amp_13q34	0.729	1
Amp_3p25.1	Amp_8p11.21	0.729	1
Amp_8p11.23	Amp_10q22.3	0.729	1
Amp_8p11.21	Del_4p16.3	0.729	1
Amp_19q13.42	Del_17p12	0.729	1
GPS2	TBX3	0.73	1
HIST1H3B	TBX3	0.73	1
TBX3	THEM5	0.73	1
TBX3	IRS4	0.73	1
TBX3	ZNF687	0.73	1
SHISA4	Amp_8p11.21	0.73	1
MKL1	Amp_8p11.21	0.73	1
7q-Amp	Amp_6p23	0.73	1
Amp_8q24.21	Del_22q13.32	0.73	1
ASB10	Del_9p23	0.731	1
C1QTNF5	Amp_19p13.12	0.731	1
FAM86B1	Del_9p23	0.731	1
PIK3R1	15q-Del	0.731	1
PTHLH	Amp_19p13.12	0.731	1
SMAD2	Amp_19p13.12	0.731	1
SMAD4	Amp_19p13.12	0.731	1
ZFP36L2	Amp_19p13.12	0.731	1
ABCA8	15q-Del	0.731	1
ATXN7L1	Amp_19p13.12	0.731	1
DNAH12	Amp_15q26.3	0.731	1
GRHL2	Del_9p23	0.731	1
GYG2	Del_9p23	0.731	1
MORN1	Del_9p23	0.731	1
MYH9	Amp_15q26.3	0.731	1
OR4D10	Amp_19p13.12	0.731	1
WDR52	Amp_15q26.3	0.731	1
BCORL1	9q-Del	0.731	1
MLL4	Del_6p25.3	0.731	1
MR1	Amp_19p13.12	0.731	1
PSIP1	Del_9p23	0.731	1
SPEN	11q-Del	0.731	1
TPP2	Del_9p23	0.731	1
14q-Del	Amp_8p11.23	0.731	1
DOCK11	Del_5q21.3	0.732	1
1q-Amp	Amp_17q12	0.732	1
8p-Del	Amp_10q22.3	0.732	1
Amp_3p25.1	Amp_8p11.23	0.732	1
Amp_15q26.3	Amp_19q12	0.732	1
Amp_19q13.42	Del_6q15	0.732	1
ACTL6B	Del_10q23.31	0.733	1
CBFB	Del_1p36.13	0.733	1
CDKN1B	Del_10q23.31	0.733	1
CTCF	5q-Del	0.733	1
PTPN22	Del_10q23.31	0.733	1
TAF1L	5q-Del	0.733	1
TBL1XR1	Del_10q23.31	0.733	1
WSCD2	Del_22q13.32	0.733	1
COL6A5	20q-Amp	0.733	1
DST	Amp_14q21.1	0.733	1
PRICKLE3	Del_10q23.31	0.733	1
MED23	PCNXL2	0.733	1
AARS	Amp_20q13.2	0.734	1
EPDR1	Amp_20q13.2	0.734	1
GATA3	PTEN	0.734	1
ZFP36L1	Amp_20q13.2	0.734	1
FBXO17	Amp_20q13.2	0.734	1
ZNF41	20p-Amp	0.734	1
AKT2	Amp_20q13.2	0.734	1
CDC42EP1	Amp_20q13.2	0.734	1
NBPF9	Amp_20q13.2	0.734	1
Amp_6q21	Del_19q13.32	0.734	1
Amp_17q12	Del_10q26.3	0.734	1
WSCD2	Amp_1q44	0.735	1
ATXN2	14q-Del	0.735	1
ATXN2	17q-Del	0.735	1
CDC42EP1	Del_16q24.3	0.735	1
MED23	17q-Del	0.735	1
MED23	Del_21q11.2	0.735	1
MUC6	17q-Del	0.735	1
RBMX	Del_21q11.2	0.735	1
ZMYM3	Amp_19q12	0.735	1
EPDR1	5q-Del	0.736	1
EPDR1	8p-Del	0.736	1
FAM20C	4q-Del	0.736	1
FOXA1	Del_6p25.3	0.736	1
HLA-DRB5	4q-Del	0.736	1
RAB42	4q-Del	0.736	1
VCPIP1	16p-Amp	0.736	1
ZFP36L1	16p-Amp	0.736	1
AKD1	9p-Del	0.736	1
CCL13	4q-Del	0.736	1
FBXO17	5q-Del	0.736	1
FXYD5	8p-Del	0.736	1
GRHL2	16p-Del	0.736	1
MORN1	16p-Del	0.736	1
OR2T35	4q-Del	0.736	1
XBP1	4q-Del	0.736	1
AKT2	5q-Del	0.736	1
AKT2	8p-Del	0.736	1
C15orf39	16p-Del	0.736	1
CDC42EP1	5q-Del	0.736	1
MKL1	5q-Del	0.736	1
MKL1	8p-Del	0.736	1
PSIP1	16p-Del	0.736	1
RHBG	4q-Del	0.736	1
RIBC1	4q-Del	0.736	1
SLC35B2	16p-Del	0.736	1
TTPAL	4q-Del	0.736	1
USP36	16p-Del	0.736	1
ZBTB7C	4q-Del	0.736	1
ZMYM3	22q-Del	0.736	1
AARS	MAP2K4	0.737	1
ACTL6B	GATA3	0.737	1
ACTL6B	9p-Del	0.737	1
CDKN1B	GATA3	0.737	1
CTCF	RPGR	0.737	1
CTCF	TAF1L	0.737	1
CTCF	ANKRD12	0.737	1
CTCF	TNRC6B	0.737	1
GATA3	PTPN22	0.737	1
GATA3	PRICKLE3	0.737	1
GATA3	ANGPT4	0.737	1
GATA3	ATHL1	0.737	1
GATA3	1q-Del	0.737	1
MAP2K4	VCPIP1	0.737	1
MAP2K4	ZFP36L1	0.737	1
MAP2K4	NFE2L3	0.737	1
MAP2K4	KCNN3	0.737	1
MYB	COL6A5	0.737	1
PIK3R1	Del_14q24.1	0.737	1
PIWIL1	TAF1L	0.737	1
PIWIL1	TNRC6B	0.737	1
RPGR	TNRC6B	0.737	1
TBL1XR1	Del_10q26.3	0.737	1
VCPIP1	8p-Del	0.737	1
WSCD2	Amp_8p11.21	0.737	1
ZFP36L1	8p-Del	0.737	1
COL6A5	Amp_10q22.3	0.737	1
PRICKLE3	Del_10q26.3	0.737	1
SPRR2B	8p-Amp	0.737	1
ANGPT4	Del_10q26.3	0.737	1
7p-Amp	18q-Del	0.737	1
Amp_1q21.3	Del_12q24.31	0.737	1
HIST1H3B	Del_5q21.3	0.738	1
MAP3K1	Del_8p23.2	0.738	1
NCOR1	Amp_3p25.1	0.738	1
THEM5	Amp_1q21.3	0.738	1
THEM5	Del_5q21.3	0.738	1
TP53	ICOSLG	0.738	1
TP53	CABYR	0.738	1
TP53	TCP11	0.738	1
GPRIN2	8q-Amp	0.738	1
GPRIN2	Amp_1q21.3	0.738	1
PPEF1	8q-Amp	0.738	1
ZNF41	8q-Amp	0.738	1
ZNF41	Amp_1q21.3	0.738	1
FGFR2	Del_5q21.3	0.738	1
IRS4	8q-Amp	0.738	1
IRS4	Del_5q21.3	0.738	1
17q-Amp	Amp_3p25.1	0.738	1
16p-Del	Amp_1q21.3	0.738	1
18p-Del	Amp_1p22.3	0.738	1
Amp_10q22.3	Del_18q23	0.738	1
ARID1A	GPS2	0.739	1
ARID1A	THEM5	0.739	1
ARID1A	GPRIN2	0.739	1
ARID1A	ZNF41	0.739	1
ARID1A	FGFR2	0.739	1
FAM20C	MAP3K1	0.739	1
GPS2	NF1	0.739	1
HLA-DRB5	MAP3K1	0.739	1
HLA-DRB5	Amp_12p13.33	0.739	1
HLA-DRB5	Del_9q21.11	0.739	1
MAP3K1	RAB42	0.739	1
MAP3K1	CCL13	0.739	1
MAP3K1	OXCT2	0.739	1
MAP3K1	RIBC1	0.739	1
MAP3K1	TTPAL	0.739	1
MAP3K1	ZBTB7C	0.739	1
MAP3K1	ZNF362	0.739	1
MLL3	Del_6p25.3	0.739	1
RAB42	Amp_12p13.33	0.739	1
RAB42	Del_9q21.11	0.739	1
RPGR	Amp_3q26.32	0.739	1
ABCA8	Amp_8q24.21	0.739	1
CCL13	Amp_12p13.33	0.739	1
CCL13	Del_9q21.11	0.739	1
ERBB3	Amp_3q26.32	0.739	1
GPRIN2	NF1	0.739	1
OR2T35	Amp_12p13.33	0.739	1
OR2T35	Del_9q21.11	0.739	1
SPRR2B	6q-Del	0.739	1
WDR52	13q-Del	0.739	1
XBP1	Amp_12p13.33	0.739	1
XBP1	Del_9q21.11	0.739	1
OXCT2	Amp_12p13.33	0.739	1
RHBG	Amp_12p13.33	0.739	1
RHBG	Del_9q21.11	0.739	1
RIBC1	Amp_12p13.33	0.739	1
SDC1	6q-Del	0.739	1
TNRC6B	Amp_3q26.32	0.739	1
TTPAL	Amp_12p13.33	0.739	1
TTPAL	Del_9q21.11	0.739	1
ZBTB7C	Amp_12p13.33	0.739	1
ZBTB7C	Del_9q21.11	0.739	1
ZNF362	Del_9q21.11	0.739	1
8p-Amp	Amp_3q26.32	0.739	1
AARS	20q-Amp	0.74	1
AARS	Amp_11q14.1	0.74	1
MLL3	Amp_20q13.2	0.74	1
RB1	BCORL1	0.74	1
RUNX1	DST	0.74	1
VCPIP1	Amp_11q14.1	0.74	1
COL6A5	Amp_1q44	0.74	1
FHOD3	1q-Amp	0.74	1
HLA-C	Amp_11q14.1	0.74	1
NFE2L3	Amp_11q14.1	0.74	1
EIF4A2	Amp_11q14.1	0.74	1
KCNN3	Amp_11q14.1	0.74	1
ZMYM3	Del_7q36.1	0.74	1
16p-Amp	Amp_6q21	0.74	1
17q-Amp	16q-Del	0.74	1
7q-Amp	5q-Del	0.74	1
16p-Del	Amp_17q12	0.74	1
4p-Del	Amp_20q13.2	0.74	1
5q-Del	Amp_3p25.1	0.74	1
CDKN1B	4p-Del	0.741	1
RB1	Del_12q24.31	0.741	1
TBL1XR1	4p-Del	0.741	1
AKD1	4p-Del	0.741	1
DNAH12	16p-Amp	0.741	1
HRNR	5p-Amp	0.741	1
MORN1	Amp_8p11.23	0.741	1
UBC	Del_3p21.31	0.741	1
UBC	Del_9p21.3	0.741	1
WDR52	16p-Amp	0.741	1
ANGPT4	4p-Del	0.741	1
CASZ1	Del_12p13.1	0.741	1
PSIP1	Amp_8p11.23	0.741	1
TGS1	Del_9p21.3	0.741	1
Amp_8p11.23	Del_11p15.5	0.741	1
Amp_8p11.21	Del_9p23	0.741	1
C1QTNF5	Amp_10q22.3	0.742	1
FAM20C	14q-Del	0.742	1
FAM20C	Amp_19q12	0.742	1
FAM20C	Del_21q11.2	0.742	1
HLA-DRB5	14q-Del	0.742	1
HLA-DRB5	17q-Del	0.742	1
HLA-DRB5	Amp_19q12	0.742	1
HLA-DRB5	Del_21q11.2	0.742	1
PTEN	4p-Del	0.742	1
PTHLH	Amp_10q22.3	0.742	1
RAB42	14q-Del	0.742	1
RAB42	17q-Del	0.742	1
RAB42	Del_21q11.2	0.742	1
SMAD2	Amp_10q22.3	0.742	1
SMAD4	Amp_10q22.3	0.742	1
AKD1	1q-Amp	0.742	1
ATXN7L1	Amp_10q22.3	0.742	1
CCL13	14q-Del	0.742	1
CCL13	17q-Del	0.742	1
CCL13	Amp_19q12	0.742	1
CCNL2	Amp_10q22.3	0.742	1
COL6A5	4q-Del	0.742	1
FHOD3	Del_2q37.3	0.742	1
OR2T35	14q-Del	0.742	1
OR2T35	17q-Del	0.742	1
OR2T35	Amp_19q12	0.742	1
OR2T35	Del_21q11.2	0.742	1
OR4D10	Amp_10q22.3	0.742	1
UBC	Del_2q37.3	0.742	1
XBP1	14q-Del	0.742	1
XBP1	17q-Del	0.742	1
XBP1	Amp_19q12	0.742	1
XBP1	Del_21q11.2	0.742	1
ANKRD20A4	Amp_10q22.3	0.742	1
IRS4	Del_6q15	0.742	1
MR1	Amp_10q22.3	0.742	1
OXCT2	Amp_19q12	0.742	1
OXCT2	Del_21q11.2	0.742	1
PAX2	14q-Del	0.742	1
PAX2	17q-Del	0.742	1
RHBG	14q-Del	0.742	1
RHBG	Del_21q11.2	0.742	1
RIBC1	14q-Del	0.742	1
RIBC1	17q-Del	0.742	1
RIBC1	Amp_19q12	0.742	1
RIBC1	Del_21q11.2	0.742	1
TFE3	Amp_10q22.3	0.742	1
TTPAL	14q-Del	0.742	1
TTPAL	17q-Del	0.742	1
ZBTB7C	14q-Del	0.742	1
ZBTB7C	17q-Del	0.742	1
ZBTB7C	Amp_19q12	0.742	1
ZBTB7C	Del_21q11.2	0.742	1
ZNF362	14q-Del	0.742	1
ZNF362	17q-Del	0.742	1
Amp_1q21.3	Amp_8q24.21	0.742	1
Amp_4q13.3	Del_17p12	0.742	1
Amp_10p15.1	Del_7q36.1	0.742	1
ACTL6B	RUNX1	0.743	1
AQP12A	13q-Del	0.743	1
ASB10	PTEN	0.743	1
CTCF	Del_22q13.32	0.743	1
FAM86B1	PTEN	0.743	1
FOXA1	22q-Del	0.743	1
PTEN	TBX3	0.743	1
PTEN	GRHL2	0.743	1
PTEN	GYG2	0.743	1
PTEN	MORN1	0.743	1
PTEN	C15orf39	0.743	1
PTEN	USP36	0.743	1
RUNX1	ANGPT4	0.743	1
RUNX1	1q-Del	0.743	1
ATXN2	Del_9p23	0.743	1
DST	Del_12q23.1	0.743	1
MLC1	13q-Del	0.743	1
CABYR	13q-Del	0.743	1
CEP57	13q-Del	0.743	1
CXCR3	13q-Del	0.743	1
MLL4	Amp_20q13.2	0.743	1
MUC6	Amp_17q23.1	0.743	1
PCNXL2	7p-Amp	0.743	1
1p-Del	Del_20p13	0.743	1
9q-Del	Amp_14q21.1	0.743	1
Amp_14q21.1	Del_11p15.5	0.743	1
Amp_17q12	Del_2q37.3	0.743	1
AQP12A	Del_17p12	0.744	1
ERBB2	MUC6	0.744	1
ERBB2	Amp_6p23	0.744	1
HIST1H2BC	Del_17p12	0.744	1
KRAS	Del_17p12	0.744	1
VCPIP1	HRNR	0.744	1
ZFP36L1	HRNR	0.744	1
COL6A5	Del_5q11.2	0.744	1
HRNR	NFE2L3	0.744	1
HRNR	EIF4A2	0.744	1
HRNR	KCNN3	0.744	1
ICOSLG	Del_17p12	0.744	1
CABYR	Del_17p12	0.744	1
CEP57	Del_17p12	0.744	1
CXCR3	Del_17p12	0.744	1
DOCK11	MED23	0.744	1
DOCK11	MUC6	0.744	1
TARBP2	Del_17p12	0.744	1
Amp_1p22.3	Del_12q23.1	0.744	1
Amp_17q23.1	Del_5q21.3	0.744	1
AQP12A	Del_19q13.32	0.745	1
CDKN1B	18p-Del	0.745	1
EPDR1	5p-Amp	0.745	1
EPDR1	Amp_6q21	0.745	1
EPDR1	Amp_11p13	0.745	1
FAM20C	Amp_12q15	0.745	1
FAM20C	Del_7q36.1	0.745	1
GATA3	Del_2q37.3	0.745	1
HIST1H2BC	Del_19q13.32	0.745	1
HLA-DRB5	Amp_12q15	0.745	1
HLA-DRB5	Del_7q36.1	0.745	1
KRAS	Del_19q13.32	0.745	1
SF3B1	20q-Amp	0.745	1
DLX6	Amp_6q21	0.745	1
DLX6	Amp_19q13.42	0.745	1
FBXO17	5p-Amp	0.745	1
FBXO17	Amp_6q21	0.745	1
FBXO17	Amp_11p13	0.745	1
FBXO17	Amp_19q13.42	0.745	1
FXYD5	5p-Amp	0.745	1
FXYD5	Amp_11p13	0.745	1
FXYD5	Amp_19q13.42	0.745	1
ICOSLG	Del_19q13.32	0.745	1
MLC1	Del_19q13.32	0.745	1
OR2T35	Del_7q36.1	0.745	1
OR6C76	Del_19q13.32	0.745	1
SHISA4	5p-Amp	0.745	1
SHISA4	Amp_6q21	0.745	1
SHISA4	Amp_19q13.42	0.745	1
WDR52	Amp_11q14.1	0.745	1
XBP1	Amp_12q15	0.745	1
XBP1	Del_7q36.1	0.745	1
AKT2	5p-Amp	0.745	1
AKT2	Amp_6q21	0.745	1
AKT2	Amp_11p13	0.745	1
CABYR	Del_19q13.32	0.745	1
CCDC82	Del_19q13.32	0.745	1
CDC42EP1	5p-Amp	0.745	1
CDC42EP1	Amp_6q21	0.745	1
CXCR3	Del_19q13.32	0.745	1
KDM6A	20q-Amp	0.745	1
KDM6A	Amp_11q14.1	0.745	1
MKL1	Amp_6q21	0.745	1
MKL1	Amp_11p13	0.745	1
MKL1	Amp_19q13.42	0.745	1
NBPF9	5p-Amp	0.745	1
NBPF9	Amp_6q21	0.745	1
NBPF9	Amp_11p13	0.745	1
NBPF9	Amp_19q13.42	0.745	1
OXCT2	Amp_12q15	0.745	1
PAX2	Amp_12q15	0.745	1
RHBG	Amp_12q15	0.745	1
RHBG	Del_7q36.1	0.745	1
RIBC1	Del_7q36.1	0.745	1
TARBP2	Del_19q13.32	0.745	1
TCP11	Del_19q13.32	0.745	1
TTPAL	Del_7q36.1	0.745	1
ZBTB7C	Amp_12q15	0.745	1
ZBTB7C	Del_7q36.1	0.745	1
ZNF362	Del_7q36.1	0.745	1
8q-Amp	Del_1p22.1	0.745	1
ARID1A	16p-Del	0.746	1
ARID1A	9q-Del	0.746	1
CDH1	Amp_11q13.3	0.746	1
CTCF	Del_1p36.13	0.746	1
MLL3	MED23	0.746	1
MLL3	MUC6	0.746	1
MLL3	RBMX	0.746	1
MLL3	ZMYM3	0.746	1
PIWIL1	Del_1p36.13	0.746	1
COL6A5	17q-Amp	0.746	1
COL6A5	Amp_4q13.3	0.746	1
ERBB3	Del_1p36.13	0.746	1
MLL4	8p-Del	0.746	1
20p-Amp	Amp_1q44	0.746	1
8p-Amp	Del_15q13.1	0.746	1
ASB10	Del_19p13.3	0.747	1
CASP8	FOXA1	0.747	1
CASP8	11p-Del	0.747	1
CASP8	Del_9q34.2	0.747	1
CBFB	MYB	0.747	1
CBFB	UBC	0.747	1
CBFB	FRMPD2	0.747	1
CTCF	Amp_19q13.42	0.747	1
FOXA1	FRMPD2	0.747	1
GATA3	20p-Amp	0.747	1
HIST1H3B	Amp_6p23	0.747	1
MLL3	Del_17p12	0.747	1
MYB	11p-Del	0.747	1
MYB	Del_9q34.2	0.747	1
PIWIL1	5p-Amp	0.747	1
PIWIL1	Amp_6q21	0.747	1
PIWIL1	Amp_8p11.21	0.747	1
PIWIL1	Amp_19q13.42	0.747	1
RPGR	Amp_11p13	0.747	1
RPGR	Amp_19q13.42	0.747	1
TAF1L	5p-Amp	0.747	1
TAF1L	Amp_6q21	0.747	1
TAF1L	Amp_8p11.21	0.747	1
TAF1L	Amp_11p13	0.747	1
ZFP36L1	Del_4p16.3	0.747	1
ZFP36L1	Del_5q11.2	0.747	1
ANKRD12	5p-Amp	0.747	1
ANKRD12	Amp_19q13.42	0.747	1
DNAH12	Del_6q15	0.747	1
DST	Del_10q23.31	0.747	1
ERBB3	Amp_11p13	0.747	1
FHOD3	11p-Del	0.747	1
HLA-C	Del_4p16.3	0.747	1
NFE2L3	Del_4p16.3	0.747	1
NFE2L3	Del_5q11.2	0.747	1
UBC	11p-Del	0.747	1
ZNF41	Amp_6p23	0.747	1
C15orf39	Del_19p13.3	0.747	1
EIF4A2	Del_4p16.3	0.747	1
EIF4A2	Del_5q11.2	0.747	1
FGFR2	Amp_6p23	0.747	1
KCNN3	Del_4p16.3	0.747	1
SLC35B2	Del_19p13.3	0.747	1
TGS1	Del_9q34.2	0.747	1
TNRC6B	5p-Amp	0.747	1
TNRC6B	Amp_6q21	0.747	1
USP36	Del_19p13.3	0.747	1
ZNF687	Amp_6p23	0.747	1
5p-Amp	Del_9p23	0.747	1
Amp_20q13.2	Del_5q11.2	0.747	1
AQP12A	Del_6q15	0.748	1
C1QTNF5	NCOR1	0.748	1
C1QTNF5	17q-Amp	0.748	1
C1QTNF5	Amp_4q13.3	0.748	1
MAP2K4	Del_6q15	0.748	1
NCOR1	ZFP36L2	0.748	1
NCOR1	ANKRD20A4	0.748	1
PTHLH	17q-Amp	0.748	1
PTHLH	Amp_4q13.3	0.748	1
SMAD2	17q-Amp	0.748	1
SMAD2	Amp_4q13.3	0.748	1
ZFP36L2	Amp_4q13.3	0.748	1
CCNL2	Amp_4q13.3	0.748	1
FHOD3	11q-Del	0.748	1
ICOSLG	Del_6q15	0.748	1
MLC1	Del_6q15	0.748	1
OR4D10	17q-Amp	0.748	1
OR4D10	Amp_4q13.3	0.748	1
ANKRD20A4	17q-Amp	0.748	1
CEP57	Del_6q15	0.748	1
TFE3	Amp_4q13.3	0.748	1
5p-Amp	Del_6p25.3	0.748	1
7q-Amp	Del_4q35.1	0.748	1
7q-Amp	Del_15q13.1	0.748	1
Amp_1p22.3	Del_6q15	0.748	1
Amp_19q13.42	Del_6p25.3	0.748	1
ACTL6B	8p-Amp	0.749	1
ASB10	DST	0.749	1
CDKN1B	8p-Amp	0.749	1
CDKN1B	18q-Del	0.749	1
FAM20C	MLL3	0.749	1
FAM86B1	DST	0.749	1
FOXA1	Del_12p13.1	0.749	1
MAP3K1	COL6A5	0.749	1
MLL3	RAB42	0.749	1
MLL3	CCL13	0.749	1
MLL3	OR2T35	0.749	1
MLL3	OXCT2	0.749	1
MLL3	PAX2	0.749	1
MLL3	ZBTB7C	0.749	1
PIWIL1	Amp_10p15.1	0.749	1
PTEN	Del_11q23.3	0.749	1
TAF1L	Amp_10p15.1	0.749	1
TBL1XR1	8p-Amp	0.749	1
TCP10	DST	0.749	1
WSCD2	PCNXL2	0.749	1
AKD1	8q-Amp	0.749	1
ANKRD12	Amp_10p15.1	0.749	1
COL6A5	Amp_12p13.33	0.749	1
COL6A5	Del_9q21.11	0.749	1
DST	GRHL2	0.749	1
DST	SLC35B2	0.749	1
DST	USP36	0.749	1
HRNR	SPEN	0.749	1
PRICKLE3	8p-Amp	0.749	1
PRICKLE3	18q-Del	0.749	1
ANGPT4	8p-Amp	0.749	1
BCORL1	Del_13q14.2	0.749	1
DLG1	PCNXL2	0.749	1
APC	CTCF	0.75	1
CTCF	SF3B1	0.75	1
CTCF	MYH9	0.75	1
CTCF	WDR52	0.75	1
CTCF	KDM6A	0.75	1
HIST1H2BC	7p-Amp	0.75	1
KRAS	7p-Amp	0.75	1
PIK3CA	SDC1	0.75	1
SF3B1	TAF1L	0.75	1
SF3B1	ANKRD12	0.75	1
SF3B1	TNRC6B	0.75	1
ANKRD12	MYH9	0.75	1
DNAH12	ERBB3	0.75	1
HRNR	Amp_11q14.1	0.75	1
MLC1	7p-Amp	0.75	1
OR6C76	7p-Amp	0.75	1
WDR52	TNRC6B	0.75	1
CABYR	7p-Amp	0.75	1
CCDC82	7p-Amp	0.75	1
CEP57	7p-Amp	0.75	1
CXCR3	7p-Amp	0.75	1
RHOA	7p-Amp	0.75	1
TCP11	7p-Amp	0.75	1
11q-Del	Amp_6p23	0.75	1
4q-Del	Amp_8q24.21	0.75	1
6q-Del	Amp_1q21.3	0.75	1
Amp_1q44	Amp_14q21.1	0.75	1
Del_4p16.3	Del_16q24.3	0.75	1
AARS	CDH1	0.751	1
AARS	7q-Amp	0.751	1
CDH1	VCPIP1	0.751	1
CDH1	ZFP36L1	0.751	1
CDH1	HLA-C	0.751	1
PTPN22	TBX3	0.751	1
TBL1XR1	TBX3	0.751	1
TBX3	PRICKLE3	0.751	1
TBX3	ANGPT4	0.751	1
TBX3	1q-Del	0.751	1
VCPIP1	7q-Amp	0.751	1
VCPIP1	Del_1p22.1	0.751	1
ZFP36L1	SPEN	0.751	1
ZFP36L1	7q-Amp	0.751	1
AKD1	8p-Amp	0.751	1
AKD1	18q-Del	0.751	1
HLA-C	7q-Amp	0.751	1
EIF4A2	7q-Amp	0.751	1
EIF4A2	Del_1p22.1	0.751	1
KCNN3	SPEN	0.751	1
KCNN3	7q-Amp	0.751	1
PCNXL2	Amp_3p25.1	0.751	1
PCNXL2	Del_7p22.3	0.751	1
4p-Del	Amp_17q12	0.751	1
PIWIL1	Amp_8q24.21	0.752	1
WSCD2	4q-Del	0.752	1
SPRR2B	Del_5q21.3	0.752	1
DLG1	4q-Del	0.752	1
SDC1	Del_5q21.3	0.752	1
TNRC6B	Amp_8q24.21	0.752	1
1q-Amp	15q-Del	0.752	1
ACTL6B	6q-Del	0.753	1
EPDR1	Amp_13q34	0.753	1
FOXA1	Amp_10q22.3	0.753	1
HLA-DRB5	8q-Amp	0.753	1
RAB42	8q-Amp	0.753	1
TBL1XR1	6q-Del	0.753	1
TBX3	DST	0.753	1
CCL13	8q-Amp	0.753	1
DLX6	Amp_13q34	0.753	1
FBXO17	Amp_13q34	0.753	1
FXYD5	Amp_13q34	0.753	1
XBP1	8q-Amp	0.753	1
AKT2	Amp_13q34	0.753	1
ATHL1	6q-Del	0.753	1
MKL1	Amp_13q34	0.753	1
OXCT2	8q-Amp	0.753	1
PAX2	8q-Amp	0.753	1
RHBG	8q-Amp	0.753	1
RIBC1	8q-Amp	0.753	1
1q-Amp	18p-Del	0.753	1
20q-Amp	4q-Del	0.753	1
1q-Del	6q-Del	0.753	1
FAM86B1	Del_11p15.5	0.754	1
MAP3K1	PTEN	0.754	1
PTEN	Amp_12p13.33	0.754	1
PTEN	Del_9q21.11	0.754	1
TCP10	Del_11p15.5	0.754	1
TCP10	Del_14q24.1	0.754	1
AKD1	1p-Del	0.754	1
AKD1	Amp_14q21.1	0.754	1
GRHL2	Del_14q24.1	0.754	1
GYG2	Del_11p15.5	0.754	1
GYG2	Del_14q24.1	0.754	1
HRNR	Del_2q37.3	0.754	1
C15orf39	Del_14q24.1	0.754	1
NF1	17p-Del	0.754	1
NF1	Amp_1q44	0.754	1
SLC35B2	Del_11p15.5	0.754	1
TPP2	Del_11p15.5	0.754	1
8p-Amp	Del_7p22.3	0.754	1
AQP12A	Amp_3p25.1	0.755	1
AQP12A	Del_7p22.3	0.755	1
GATA3	Del_14q24.1	0.755	1
HIST1H2BC	Amp_3p25.1	0.755	1
HIST1H2BC	Del_7p22.3	0.755	1
KRAS	Amp_3p25.1	0.755	1
KRAS	Del_7p22.3	0.755	1
PIK3R1	Amp_15q26.3	0.755	1
RB1	MED23	0.755	1
RB1	MUC6	0.755	1
SF3B1	Del_5q11.2	0.755	1
TP53	8p-Del	0.755	1
WSCD2	Amp_1q21.3	0.755	1
ABCA8	Amp_15q26.3	0.755	1
ICOSLG	Amp_3p25.1	0.755	1
MLC1	Amp_3p25.1	0.755	1
OR6C76	Amp_3p25.1	0.755	1
OR6C76	Del_7p22.3	0.755	1
WDR52	Del_4p16.3	0.755	1
BCORL1	Amp_15q26.3	0.755	1
CABYR	Del_7p22.3	0.755	1
CCDC82	Amp_3p25.1	0.755	1
CCDC82	Del_7p22.3	0.755	1
CEP57	Amp_3p25.1	0.755	1
CEP57	Del_7p22.3	0.755	1
CXCR3	Amp_3p25.1	0.755	1
CXCR3	Del_7p22.3	0.755	1
MLL4	Amp_1q21.3	0.755	1
RHOA	Amp_3p25.1	0.755	1
RHOA	Del_7p22.3	0.755	1
TARBP2	Amp_3p25.1	0.755	1
TARBP2	Del_7p22.3	0.755	1
TCP11	Del_7p22.3	0.755	1
18q-Del	Amp_13q34	0.755	1
Amp_6p23	Amp_12q15	0.755	1
ASB10	PIK3CA	0.756	1
FAM20C	15q-Del	0.756	1
GPS2	COL6A5	0.756	1
HIST1H3B	COL6A5	0.756	1
HLA-DRB5	15q-Del	0.756	1
HLA-DRB5	9q-Del	0.756	1
HLA-DRB5	Del_20p13	0.756	1
PIK3CA	C15orf39	0.756	1
RAB42	15q-Del	0.756	1
RAB42	9q-Del	0.756	1
RAB42	Del_20p13	0.756	1
CCL13	15q-Del	0.756	1
CCL13	9q-Del	0.756	1
CCL13	Del_20p13	0.756	1
COL6A5	GPRIN2	0.756	1
COL6A5	IRS4	0.756	1
COL6A5	Amp_19q12	0.756	1
COL6A5	Del_21q11.2	0.756	1
ICOSLG	1q-Amp	0.756	1
OR2T35	15q-Del	0.756	1
OR2T35	9q-Del	0.756	1
OR6C76	1q-Amp	0.756	1
XBP1	15q-Del	0.756	1
XBP1	9q-Del	0.756	1
XBP1	Del_20p13	0.756	1
CABYR	1q-Amp	0.756	1
NF1	18p-Del	0.756	1
OXCT2	15q-Del	0.756	1
OXCT2	Del_20p13	0.756	1
PAX2	15q-Del	0.756	1
RHBG	15q-Del	0.756	1
RHBG	9q-Del	0.756	1
RIBC1	15q-Del	0.756	1
RIBC1	9q-Del	0.756	1
TCP11	1q-Amp	0.756	1
TTPAL	15q-Del	0.756	1
TTPAL	9q-Del	0.756	1
TTPAL	Del_20p13	0.756	1
ZBTB7C	15q-Del	0.756	1
ZBTB7C	9q-Del	0.756	1
ZNF362	15q-Del	0.756	1
ZNF362	9q-Del	0.756	1
9q-Del	Del_12q24.31	0.756	1
MAP3K1	WSCD2	0.757	1
MAP3K1	CASZ1	0.757	1
ABCA8	Amp_17q12	0.757	1
ATXN2	15q-Del	0.757	1
ATXN2	9q-Del	0.757	1
SPRR2B	Amp_6p23	0.757	1
CASZ1	Amp_12p13.33	0.757	1
CASZ1	Del_9q21.11	0.757	1
MED23	Del_20p13	0.757	1
MLL4	Del_9q21.11	0.757	1
MUC6	15q-Del	0.757	1
RBMX	9q-Del	0.757	1
SDC1	Amp_6p23	0.757	1
SPEN	Amp_19q13.42	0.757	1
1q-Amp	Amp_12q15	0.757	1
AARS	Amp_3q26.32	0.758	1
FOXA1	20q-Amp	0.758	1
GATA3	Del_21q11.2	0.758	1
GPS2	Del_6q27	0.758	1
PIWIL1	8p-Del	0.758	1
THEM5	Del_6q27	0.758	1
VCPIP1	Amp_3q26.32	0.758	1
PPEF1	17p-Del	0.758	1
IRS4	17p-Del	0.758	1
ZNF687	17p-Del	0.758	1
ZNF687	Del_6q27	0.758	1
Amp_4q13.3	Amp_8p11.23	0.758	1
ACTL6B	ARID1A	0.759	1
ACTL6B	NF1	0.759	1
APC	PIK3CA	0.759	1
APC	Amp_11q13.3	0.759	1
ARID1A	TBL1XR1	0.759	1
ARID1A	PRICKLE3	0.759	1
ARID1A	1q-Del	0.759	1
CDH1	SF3B1	0.759	1
CDKN1B	NF1	0.759	1
CTCF	Del_10q23.31	0.759	1
ERBB2	Del_9p23	0.759	1
FBXW7	Del_15q13.1	0.759	1
PIK3CA	WDR52	0.759	1
RPGR	Del_10q23.31	0.759	1
TBL1XR1	NF1	0.759	1
ABCA8	Del_4q35.1	0.759	1
ERBB3	Del_10q23.31	0.759	1
BCORL1	Del_4q35.1	0.759	1
BCORL1	Del_15q13.1	0.759	1
KDM6A	Del_1p22.1	0.759	1
ERBB2	WSCD2	0.76	1
ERBB2	DLG1	0.76	1
ERBB2	MLL4	0.76	1
NCOR1	Amp_19p13.12	0.76	1
PIWIL1	Amp_13q34	0.76	1
RPGR	Amp_13q34	0.76	1
TP53	18p-Del	0.76	1
DLX6	22q-Del	0.76	1
ERBB3	Amp_13q34	0.76	1
FXYD5	22q-Del	0.76	1
SHISA4	22q-Del	0.76	1
AKT2	22q-Del	0.76	1
SPEN	7q-Amp	0.76	1
TGS1	Amp_11q13.3	0.76	1
EPDR1	1p-Del	0.761	1
ERBB2	7p-Amp	0.761	1
AKD1	Del_12q24.31	0.761	1
COL6A5	Amp_3q26.32	0.761	1
DLX6	1p-Del	0.761	1
DST	4p-Del	0.761	1
FBXO17	1p-Del	0.761	1
FBXO17	Amp_14q21.1	0.761	1
FXYD5	Amp_14q21.1	0.761	1
HRNR	11p-Del	0.761	1
HRNR	Del_9q34.2	0.761	1
NFE2L3	Amp_1p22.3	0.761	1
SHISA4	1p-Del	0.761	1
SHISA4	Amp_14q21.1	0.761	1
UBC	Del_6p25.3	0.761	1
CDC42EP1	1p-Del	0.761	1
EIF4A2	Amp_1p22.3	0.761	1
KCNN3	Amp_1p22.3	0.761	1
MKL1	1p-Del	0.761	1
MKL1	Amp_14q21.1	0.761	1
PCNXL2	11p-Del	0.761	1
TGS1	Del_6p25.3	0.761	1
17q-Amp	Del_4p16.3	0.761	1
18p-Del	Amp_1q21.3	0.761	1
Amp_1p22.3	Amp_3q26.32	0.761	1
ARID1A	18q-Del	0.762	1
FAM86B1	MAP2K4	0.762	1
MAP2K4	TCP10	0.762	1
MAP2K4	GRHL2	0.762	1
MAP2K4	GYG2	0.762	1
MAP2K4	C15orf39	0.762	1
MAP2K4	PSIP1	0.762	1
MAP2K4	SLC35B2	0.762	1
MAP2K4	TPP2	0.762	1
MAP2K4	USP36	0.762	1
PTEN	14q-Del	0.762	1
TAF1L	Del_3p21.31	0.762	1
WSCD2	17q-Del	0.762	1
WSCD2	Amp_19q12	0.762	1
ANKRD12	Del_3p21.31	0.762	1
ANKRD12	Del_9p21.3	0.762	1
DST	4q-Del	0.762	1
ERBB3	Del_9p21.3	0.762	1
CASZ1	14q-Del	0.762	1
CASZ1	Amp_19q12	0.762	1
CASZ1	Del_21q11.2	0.762	1
DLG1	14q-Del	0.762	1
DLG1	Amp_19q12	0.762	1
MLL4	14q-Del	0.762	1
MLL4	Del_21q11.2	0.762	1
7p-Amp	16q-Del	0.762	1
7p-Amp	Del_1p36.13	0.762	1
22q-Del	Amp_6p23	0.762	1
6q-Del	Amp_3p25.1	0.762	1
Amp_8p11.21	Del_2q37.3	0.762	1
ERBB2	TP53	0.763	1
FOXA1	Del_8p23.2	0.763	1
RPGR	Amp_1q44	0.763	1
SF3B1	DNAH12	0.763	1
DNAH12	KDM6A	0.763	1
ERBB3	Amp_1q44	0.763	1
8p-Amp	17p-Del	0.763	1
8q-Amp	Amp_11q14.1	0.763	1
17p-Del	Amp_13q34	0.763	1
AQP12A	Amp_19p13.12	0.764	1
CTCF	FBXW7	0.764	1
CTCF	PIK3R1	0.764	1
CTCF	ABCA8	0.764	1
CTCF	BCORL1	0.764	1
CTCF	Del_10q26.3	0.764	1
EPDR1	Amp_17q23.1	0.764	1
FBXW7	ERBB3	0.764	1
GATA3	PIWIL1	0.764	1
GATA3	TAF1L	0.764	1
GATA3	ANKRD12	0.764	1
GATA3	ERBB3	0.764	1
GATA3	TNRC6B	0.764	1
HIST1H2BC	Amp_19p13.12	0.764	1
KRAS	Amp_19p13.12	0.764	1
MAP2K4	Amp_17q23.1	0.764	1
MAP3K1	18p-Del	0.764	1
NCOR1	Del_16q24.3	0.764	1
PIK3CA	Del_22q13.32	0.764	1
PIK3R1	PIWIL1	0.764	1
PIWIL1	Del_10q26.3	0.764	1
RPGR	BCORL1	0.764	1
RPGR	9p-Del	0.764	1
TAF1L	9p-Del	0.764	1
ABCA8	ANKRD12	0.764	1
ANKRD12	9p-Del	0.764	1
ANKRD12	Del_10q26.3	0.764	1
FBXO17	Amp_17q23.1	0.764	1
MLC1	Amp_19p13.12	0.764	1
OR6C76	Amp_19p13.12	0.764	1
SHISA4	Amp_17q23.1	0.764	1
AKT2	Amp_17q23.1	0.764	1
BCORL1	TNRC6B	0.764	1
CABYR	Amp_19p13.12	0.764	1
CCDC82	Amp_19p13.12	0.764	1
CEP57	Amp_19p13.12	0.764	1
CXCR3	Amp_19p13.12	0.764	1
MKL1	Amp_17q23.1	0.764	1
NBPF9	Amp_17q23.1	0.764	1
PCNXL2	Del_11p15.5	0.764	1
PCNXL2	Del_14q24.1	0.764	1
RHOA	Amp_19p13.12	0.764	1
TARBP2	Amp_19p13.12	0.764	1
TCP11	Amp_19p13.12	0.764	1
17q-Amp	Del_16q24.3	0.764	1
20p-Amp	15q-Del	0.764	1
Amp_3p25.1	Del_12p13.1	0.764	1
Del_7p22.3	Del_12p13.1	0.764	1
ACTL6B	Amp_17q12	0.765	1
C1QTNF5	16p-Del	0.765	1
CBFB	HIST1H3B	0.765	1
CBFB	THEM5	0.765	1
CBFB	GPRIN2	0.765	1
CBFB	FGFR2	0.765	1
CBFB	IRS4	0.765	1
CBFB	ZNF687	0.765	1
EPDR1	Del_12q23.1	0.765	1
EPDR1	Del_12q24.31	0.765	1
FAM20C	17p-Del	0.765	1
FOXA1	THEM5	0.765	1
FOXA1	GPRIN2	0.765	1
FOXA1	FGFR2	0.765	1
FOXA1	ZNF687	0.765	1
HLA-DRB5	17p-Del	0.765	1
MAP2K4	Del_6p25.3	0.765	1
SMAD4	16p-Del	0.765	1
VCPIP1	Amp_10p15.1	0.765	1
ZFP36L1	Amp_10p15.1	0.765	1
ATXN7L1	16p-Del	0.765	1
CCL13	17p-Del	0.765	1
CCNL2	16p-Del	0.765	1
DLX6	Del_12q23.1	0.765	1
DLX6	Del_12q24.31	0.765	1
FBXO17	Del_12q23.1	0.765	1
FBXO17	Del_12q24.31	0.765	1
NFE2L3	Amp_10p15.1	0.765	1
AKT2	Del_12q23.1	0.765	1
ANGPT4	Amp_17q12	0.765	1
ANKRD20A4	16p-Del	0.765	1
ATHL1	Amp_17q12	0.765	1
CDC42EP1	Del_12q23.1	0.765	1
CDC42EP1	Del_12q24.31	0.765	1
EIF4A2	Amp_10p15.1	0.765	1
NBPF9	Del_12q23.1	0.765	1
NBPF9	Del_12q24.31	0.765	1
NF1	Del_6q15	0.765	1
RIBC1	17p-Del	0.765	1
TFE3	16p-Del	0.765	1
ZBTB7C	17p-Del	0.765	1
Amp_19p13.12	Del_10q26.3	0.765	1
Amp_19q13.42	Del_5q11.2	0.765	1
AARS	RUNX1	0.766	1
HIST1H3B	Del_13q14.2	0.766	1
MYB	PCNXL2	0.766	1
RUNX1	ZFP36L1	0.766	1
RUNX1	HLA-C	0.766	1
RUNX1	NFE2L3	0.766	1
RUNX1	KCNN3	0.766	1
SF3B1	Del_6q27	0.766	1
AKD1	MED23	0.766	1
DNAH12	Del_6q27	0.766	1
MYH9	Del_6q27	0.766	1
PPEF1	Del_13q14.2	0.766	1
17q-Amp	Del_1p36.13	0.766	1
1q-Amp	Del_18q23	0.766	1
9q-Del	Amp_3q26.32	0.766	1
Amp_4q13.3	Del_1p36.13	0.766	1
Amp_4q13.3	Del_17q21.31	0.766	1
ARID1A	Del_13q14.2	0.767	1
MAP2K4	Amp_1p22.3	0.767	1
MAP3K1	20q-Amp	0.767	1
RPGR	TP53	0.767	1
TP53	ERBB3	0.767	1
WSCD2	Del_17q21.31	0.767	1
COL6A5	Amp_1q21.3	0.767	1
HLA-C	22q-Del	0.767	1
CASZ1	Amp_12q15	0.767	1
CASZ1	Del_17q21.31	0.767	1
DLG1	Amp_12q15	0.767	1
DLG1	Del_17q21.31	0.767	1
EIF4A2	22q-Del	0.767	1
MLL4	Del_7q36.1	0.767	1
Amp_10p15.1	Del_6p25.3	0.767	1
Amp_10q22.3	Del_3p21.31	0.767	1
Del_7q36.1	Del_9p23	0.767	1
ARID1A	6q-Del	0.768	1
ERBB2	Del_7p22.3	0.768	1
FAM86B1	Amp_11q13.3	0.768	1
NCOR1	Del_1p22.1	0.768	1
PTHLH	Del_16q24.3	0.768	1
RB1	Amp_6p23	0.768	1
SMAD4	Del_16q24.3	0.768	1
ZFP36L2	Del_16q24.3	0.768	1
MORN1	Amp_11q13.3	0.768	1
MUC6	8q-Amp	0.768	1
PCNXL2	Amp_19p13.12	0.768	1
PSIP1	Amp_11q13.3	0.768	1
RBMX	8q-Amp	0.768	1
20q-Amp	Del_1p22.1	0.768	1
7p-Amp	Amp_13q34	0.768	1
ACTL6B	20p-Amp	0.769	1
APC	Amp_19q13.42	0.769	1
ASB10	HRNR	0.769	1
CDKN1B	20p-Amp	0.769	1
FAM20C	Amp_15q26.3	0.769	1
FAM86B1	HRNR	0.769	1
HLA-DRB5	Amp_15q26.3	0.769	1
PIWIL1	4p-Del	0.769	1
PTHLH	Del_18q23	0.769	1
RAB42	Amp_15q26.3	0.769	1
SF3B1	5p-Amp	0.769	1
SF3B1	Amp_19q13.42	0.769	1
ZFP36L2	Del_18q23	0.769	1
ATXN7L1	Del_18q23	0.769	1
CCL13	Amp_15q26.3	0.769	1
DNAH12	5p-Amp	0.769	1
DNAH12	Amp_19q13.42	0.769	1
GRHL2	HRNR	0.769	1
HRNR	MORN1	0.769	1
HRNR	C15orf39	0.769	1
HRNR	SLC35B2	0.769	1
HRNR	USP36	0.769	1
MYH9	Amp_6q21	0.769	1
OR2T35	Amp_15q26.3	0.769	1
WDR52	Amp_3q26.32	0.769	1
WDR52	Amp_6q21	0.769	1
XBP1	Amp_15q26.3	0.769	1
ANKRD20A4	Del_18q23	0.769	1
ATHL1	20p-Amp	0.769	1
KDM6A	Amp_6q21	0.769	1
KDM6A	Amp_11p13	0.769	1
MR1	Del_18q23	0.769	1
OXCT2	Amp_15q26.3	0.769	1
RIBC1	Amp_15q26.3	0.769	1
ZBTB7C	Amp_15q26.3	0.769	1
ZNF362	Amp_15q26.3	0.769	1
20p-Amp	1q-Del	0.769	1
4p-Del	Amp_14q21.1	0.769	1
NCOR1	1q-Amp	0.77	1
NCOR1	Amp_15q26.3	0.77	1
RB1	WSCD2	0.77	1
RB1	DLG1	0.77	1
RB1	MLL4	0.77	1
TAF1L	11q-Del	0.77	1
GRHL2	Del_4q35.1	0.77	1
GRHL2	Del_15q13.1	0.77	1
MLC1	Del_1p36.13	0.77	1
MORN1	Del_4q35.1	0.77	1
CCDC82	Del_1p36.13	0.77	1
CXCR3	Del_1p36.13	0.77	1
PSIP1	Del_4q35.1	0.77	1
PSIP1	Del_15q13.1	0.77	1
RHOA	Del_1p36.13	0.77	1
SLC35B2	Del_15q13.1	0.77	1
TPP2	Del_4q35.1	0.77	1
TPP2	Del_15q13.1	0.77	1
USP36	Del_4q35.1	0.77	1
16q-Del	Amp_11q14.1	0.77	1
C1QTNF5	PTEN	0.771	1
FAM20C	Del_13q14.2	0.771	1
PIK3R1	Amp_1q21.3	0.771	1
PTEN	PTHLH	0.771	1
PTEN	SMAD4	0.771	1
PTEN	ATXN7L1	0.771	1
PTEN	CCNL2	0.771	1
PTEN	TFE3	0.771	1
RB1	Del_19q13.32	0.771	1
THEM5	Del_1p36.13	0.771	1
ATXN2	Del_14q24.1	0.771	1
CCL13	Del_13q14.2	0.771	1
FGFR2	Del_1p36.13	0.771	1
MUC6	Del_14q24.1	0.771	1
OXCT2	Del_13q14.2	0.771	1
PAX2	Del_13q14.2	0.771	1
RHBG	Del_13q14.2	0.771	1
TTPAL	Del_13q14.2	0.771	1
ZNF362	Del_13q14.2	0.771	1
17q-Del	Amp_12p13.33	0.771	1
4q-Del	6q-Del	0.771	1
9p-Del	Del_7q36.1	0.771	1
Amp_1p22.3	Amp_10q22.3	0.771	1
Amp_8p11.23	Del_18q23	0.771	1
Del_4q35.1	Del_6q15	0.771	1
Del_5q21.3	Del_6q15	0.771	1
Del_9q21.11	Del_21q11.2	0.771	1
AARS	Amp_17q23.1	0.772	1
FOXA1	Del_17p12	0.772	1
MLL3	WSCD2	0.772	1
RUNX1	5q-Del	0.772	1
VCPIP1	Del_10q23.31	0.772	1
ZFP36L1	Del_10q23.31	0.772	1
ZFP36L2	Del_17q21.31	0.772	1
ATXN7L1	Del_17q21.31	0.772	1
HLA-C	Amp_17q23.1	0.772	1
HLA-C	Del_10q23.31	0.772	1
ANKRD20A4	Del_17q21.31	0.772	1
BCORL1	Del_8p23.2	0.772	1
EIF4A2	Amp_17q23.1	0.772	1
NF1	Del_17p12	0.772	1
TFE3	Del_17q21.31	0.772	1
7q-Amp	Amp_11q14.1	0.772	1
Amp_19q12	Del_22q13.32	0.772	1
RPGR	18p-Del	0.773	1
RUNX1	HRNR	0.773	1
TBX3	HLA-C	0.773	1
TBX3	NFE2L3	0.773	1
TBX3	EIF4A2	0.773	1
TBX3	KCNN3	0.773	1
TP53	ATXN2	0.773	1
TP53	ZMYM3	0.773	1
SPRR2B	Del_2q37.3	0.773	1
ZNF41	Del_2q37.3	0.773	1
SDC1	Del_2q37.3	0.773	1
TNRC6B	18p-Del	0.773	1
Amp_3q26.32	Del_12p13.1	0.773	1
Amp_6q21	Del_1p22.1	0.773	1
Amp_11p13	Del_1p22.1	0.773	1
CBFB	CDH1	0.774	1
CTCF	1p-Del	0.774	1
EPDR1	Del_8p23.2	0.774	1
MAP3K1	18q-Del	0.774	1
MLL3	Del_4q35.1	0.774	1
PIWIL1	1p-Del	0.774	1
TAF1L	1p-Del	0.774	1
ANKRD12	Amp_14q21.1	0.774	1
DLX6	Del_8p23.2	0.774	1
ERBB3	Amp_14q21.1	0.774	1
FBXO17	Del_8p23.2	0.774	1
FXYD5	Del_8p23.2	0.774	1
AKT2	Del_8p23.2	0.774	1
MKL1	Del_8p23.2	0.774	1
MUC6	Del_16q24.3	0.774	1
SPEN	Amp_13q34	0.774	1
ZMYM3	Del_16q24.3	0.774	1
7q-Amp	Amp_13q34	0.774	1
8p-Amp	Del_9q21.11	0.774	1
AQP12A	Amp_10q22.3	0.775	1
ARID1A	Amp_15q26.3	0.775	1
ASB10	SPEN	0.775	1
ASB10	7q-Amp	0.775	1
FAM86B1	SPEN	0.775	1
FAM86B1	7q-Amp	0.775	1
KRAS	Amp_10q22.3	0.775	1
MAP2K4	TBX3	0.775	1
MLL3	Del_10q23.31	0.775	1
SMAD4	8q-Amp	0.775	1
TCP10	SPEN	0.775	1
GRHL2	7q-Amp	0.775	1
GYG2	7q-Amp	0.775	1
ICOSLG	Amp_10q22.3	0.775	1
MLC1	Amp_10q22.3	0.775	1
MORN1	7q-Amp	0.775	1
OR6C76	Amp_10q22.3	0.775	1
C15orf39	SPEN	0.775	1
C15orf39	7q-Amp	0.775	1
CABYR	Amp_10q22.3	0.775	1
CCDC82	Amp_10q22.3	0.775	1
CXCR3	Amp_10q22.3	0.775	1
NF1	Amp_15q26.3	0.775	1
NF1	Del_9p23	0.775	1
PCNXL2	Amp_8q24.21	0.775	1
PSIP1	7q-Amp	0.775	1
RHOA	Amp_10q22.3	0.775	1
SLC35B2	SPEN	0.775	1
SLC35B2	7q-Amp	0.775	1
TARBP2	Amp_10q22.3	0.775	1
TCP11	Amp_10q22.3	0.775	1
TFE3	8q-Amp	0.775	1
TPP2	7q-Amp	0.775	1
USP36	7q-Amp	0.775	1
18p-Del	Amp_1q44	0.775	1
9q-Del	Amp_1p22.3	0.775	1
Amp_1q21.3	Del_9q21.11	0.775	1
AARS	GATA3	0.776	1
AARS	9p-Del	0.776	1
AARS	Del_10q26.3	0.776	1
ACTL6B	COL6A5	0.776	1
CASP8	ERBB2	0.776	1
CDKN1B	COL6A5	0.776	1
ERBB2	MYB	0.776	1
ERBB2	UBC	0.776	1
FBXW7	SF3B1	0.776	1
GATA3	ZFP36L1	0.776	1
GATA3	NFE2L3	0.776	1
GATA3	EIF4A2	0.776	1
GATA3	KCNN3	0.776	1
MYB	DOCK11	0.776	1
PIK3R1	SF3B1	0.776	1
PIK3R1	KDM6A	0.776	1
PIK3R1	Amp_11q14.1	0.776	1
SF3B1	BCORL1	0.776	1
TAF1L	Del_17p12	0.776	1
TBL1XR1	COL6A5	0.776	1
VCPIP1	Del_10q26.3	0.776	1
ZFP36L1	Del_10q26.3	0.776	1
ABCA8	DNAH12	0.776	1
ABCA8	20q-Amp	0.776	1
ANKRD12	Del_17p12	0.776	1
DNAH12	BCORL1	0.776	1
FHOD3	DOCK11	0.776	1
HLA-C	9p-Del	0.776	1
SPRR2B	11p-Del	0.776	1
SPRR2B	Del_9q34.2	0.776	1
UBC	DOCK11	0.776	1
BCORL1	Amp_11q14.1	0.776	1
SDC1	11p-Del	0.776	1
SDC1	Del_9q34.2	0.776	1
1q-Amp	8p-Amp	0.776	1
7p-Amp	Del_9q21.11	0.776	1
22q-Del	Del_5q11.2	0.776	1
C1QTNF5	DST	0.777	1
ZFP36L2	DST	0.777	1
AKD1	20p-Amp	0.777	1
DST	ANKRD20A4	0.777	1
UBC	Del_11q23.3	0.777	1
Amp_8p11.21	Del_9p21.3	0.777	1
CTCF	ATXN2	0.778	1
CTCF	MED23	0.778	1
CTCF	MUC6	0.778	1
CTCF	RBMX	0.778	1
CTCF	ZMYM3	0.778	1
FBXW7	13q-Del	0.778	1
GPS2	11p-Del	0.778	1
HIST1H3B	Del_9q34.2	0.778	1
PIK3R1	5q-Del	0.778	1
PIWIL1	RBMX	0.778	1
TAF1L	MED23	0.778	1
TAF1L	MUC6	0.778	1
TAF1L	8p-Amp	0.778	1
THEM5	Del_9q34.2	0.778	1
ANKRD12	ATXN2	0.778	1
ANKRD12	MED23	0.778	1
ANKRD12	MUC6	0.778	1
ANKRD12	8p-Amp	0.778	1
DST	14q-Del	0.778	1
ERBB3	MED23	0.778	1
ERBB3	RBMX	0.778	1
MYH9	Amp_10p15.1	0.778	1
ZNF41	11p-Del	0.778	1
ZNF41	Del_9q34.2	0.778	1
BCORL1	13q-Del	0.778	1
FGFR2	11p-Del	0.778	1
FGFR2	Del_9q34.2	0.778	1
KDM6A	Amp_10p15.1	0.778	1
MED23	TNRC6B	0.778	1
TNRC6B	ZMYM3	0.778	1
TNRC6B	18q-Del	0.778	1
ZNF687	11p-Del	0.778	1
1q-Amp	7p-Amp	0.778	1
FAM86B1	16p-Amp	0.779	1
GRHL2	16p-Amp	0.779	1
GYG2	16p-Amp	0.779	1
C15orf39	16p-Amp	0.779	1
PSIP1	16p-Amp	0.779	1
RBMX	Amp_15q26.3	0.779	1
SLC35B2	16p-Amp	0.779	1
SPEN	11p-Del	0.779	1
TPP2	16p-Amp	0.779	1
USP36	16p-Amp	0.779	1
ZMYM3	Amp_15q26.3	0.779	1
7q-Amp	Del_9q34.2	0.779	1
17q-Del	Amp_8p11.21	0.779	1
9p-Del	Amp_8p11.23	0.779	1
Amp_8p11.21	Del_21q11.2	0.779	1
AQP12A	NCOR1	0.78	1
AQP12A	17q-Amp	0.78	1
AQP12A	Amp_4q13.3	0.78	1
AQP12A	Del_3p21.31	0.78	1
CTCF	Del_12q24.31	0.78	1
HIST1H2BC	NCOR1	0.78	1
HIST1H2BC	17q-Amp	0.78	1
HIST1H2BC	Amp_4q13.3	0.78	1
HIST1H2BC	Del_3p21.31	0.78	1
HIST1H2BC	Del_9p21.3	0.78	1
KRAS	17q-Amp	0.78	1
KRAS	Amp_4q13.3	0.78	1
NCOR1	ICOSLG	0.78	1
NCOR1	MLC1	0.78	1
NCOR1	CXCR3	0.78	1
NCOR1	TCP11	0.78	1
PIWIL1	Del_12q23.1	0.78	1
PIWIL1	Del_12q24.31	0.78	1
ZFP36L1	4p-Del	0.78	1
ERBB3	Del_12q23.1	0.78	1
ERBB3	Del_12q24.31	0.78	1
FHOD3	4q-Del	0.78	1
HLA-C	4p-Del	0.78	1
ICOSLG	17q-Amp	0.78	1
ICOSLG	Amp_4q13.3	0.78	1
ICOSLG	Del_9p21.3	0.78	1
MLC1	17q-Amp	0.78	1
MLC1	Amp_4q13.3	0.78	1
MLC1	Del_9p21.3	0.78	1
OR6C76	Amp_4q13.3	0.78	1
OR6C76	Del_3p21.31	0.78	1
CABYR	Amp_4q13.3	0.78	1
CABYR	Del_3p21.31	0.78	1
CCDC82	17q-Amp	0.78	1
CCDC82	Amp_4q13.3	0.78	1
CCDC82	Del_9p21.3	0.78	1
CEP57	17q-Amp	0.78	1
CEP57	Del_3p21.31	0.78	1
CEP57	Del_9p21.3	0.78	1
CXCR3	17q-Amp	0.78	1
CXCR3	Del_3p21.31	0.78	1
CXCR3	Del_9p21.3	0.78	1
EIF4A2	4p-Del	0.78	1
RHOA	17q-Amp	0.78	1
RHOA	Del_3p21.31	0.78	1
TARBP2	17q-Amp	0.78	1
TARBP2	Amp_4q13.3	0.78	1
TCP11	17q-Amp	0.78	1
TCP11	Amp_4q13.3	0.78	1
TCP11	Del_3p21.31	0.78	1
TCP11	Del_9p21.3	0.78	1
TGS1	4q-Del	0.78	1
TNRC6B	Del_12q23.1	0.78	1
16p-Amp	Amp_3q26.32	0.78	1
18p-Del	Amp_19p13.12	0.78	1
ACTL6B	Amp_6p23	0.781	1
ARID1A	ZFP36L1	0.781	1
ARID1A	HLA-C	0.781	1
ARID1A	KCNN3	0.781	1
ARID1A	Amp_1q21.3	0.781	1
C1QTNF5	Del_9p23	0.781	1
FAM20C	Amp_8p11.23	0.781	1
HLA-DRB5	Amp_8p11.23	0.781	1
PIK3R1	Del_11q23.3	0.781	1
PTHLH	Del_9p23	0.781	1
PTPN22	Amp_6p23	0.781	1
ZFP36L1	NF1	0.781	1
ZFP36L2	Del_9p23	0.781	1
OR4D10	Del_9p23	0.781	1
PRICKLE3	Amp_6p23	0.781	1
WDR52	Del_1p36.13	0.781	1
XBP1	Amp_8p11.23	0.781	1
ANKRD20A4	Del_9p23	0.781	1
KCNN3	NF1	0.781	1
KDM6A	Amp_13q34	0.781	1
KDM6A	Del_1p36.13	0.781	1
MR1	Del_9p23	0.781	1
OXCT2	Amp_8p11.23	0.781	1
RIBC1	Amp_8p11.23	0.781	1
TFE3	Del_9p23	0.781	1
TTPAL	Amp_8p11.23	0.781	1
ZNF362	Amp_8p11.23	0.781	1
16p-Del	Amp_11q13.3	0.781	1
1q-Del	Amp_6p23	0.781	1
Amp_12p13.33	Amp_17q23.1	0.781	1
EPDR1	Del_19q13.32	0.782	1
GPS2	Amp_8p11.23	0.782	1
HIST1H2BC	Del_11q23.3	0.782	1
FBXO17	Del_19q13.32	0.782	1
FXYD5	Del_19q13.32	0.782	1
SHISA4	Del_19q13.32	0.782	1
AKT2	Del_19q13.32	0.782	1
CDC42EP1	Del_19q13.32	0.782	1
CXCR3	Del_11q23.3	0.782	1
DOCK11	Del_19p13.3	0.782	1
NBPF9	Del_19q13.32	0.782	1
17q-Amp	Amp_3q26.32	0.782	1
17q-Amp	Amp_10q22.3	0.782	1
11p-Del	Amp_15q26.3	0.782	1
ACTL6B	13q-Del	0.783	1
CASP8	Del_22q13.32	0.783	1
CTCF	6q-Del	0.783	1
ERBB2	Del_9q34.2	0.783	1
FAM20C	5q-Del	0.783	1
FAM86B1	20q-Amp	0.783	1
FAM86B1	Amp_11q14.1	0.783	1
GPS2	PCNXL2	0.783	1
HLA-DRB5	5q-Del	0.783	1
MAP3K1	Amp_8q24.21	0.783	1
RAB42	5q-Del	0.783	1
RUNX1	11q-Del	0.783	1
THEM5	PCNXL2	0.783	1
TP53	PPEF1	0.783	1
TP53	ZNF41	0.783	1
AKD1	Del_13q14.2	0.783	1
CCL13	5q-Del	0.783	1
COL6A5	15q-Del	0.783	1
GYG2	20q-Amp	0.783	1
GYG2	Amp_11q14.1	0.783	1
OR2T35	5q-Del	0.783	1
XBP1	5q-Del	0.783	1
CASZ1	9q-Del	0.783	1
DLG1	9q-Del	0.783	1
DLG1	Del_20p13	0.783	1
DOCK11	Del_9q34.2	0.783	1
EIF4A2	18p-Del	0.783	1
MLL4	9q-Del	0.783	1
MLL4	Del_20p13	0.783	1
PAX2	5q-Del	0.783	1
PSIP1	20q-Amp	0.783	1
RHBG	5q-Del	0.783	1
RIBC1	5q-Del	0.783	1
SLC35B2	20q-Amp	0.783	1
TNRC6B	6q-Del	0.783	1
TPP2	20q-Amp	0.783	1
TTPAL	5q-Del	0.783	1
USP36	20q-Amp	0.783	1
ZBTB7C	5q-Del	0.783	1
ZNF362	5q-Del	0.783	1
20q-Amp	Del_15q13.1	0.783	1
13q-Del	1q-Del	0.783	1
Amp_1p22.3	Del_12p13.1	0.783	1
Amp_1q44	Amp_17q23.1	0.783	1
ACTL6B	CBFB	0.784	1
ACTL6B	FOXA1	0.784	1
CBFB	PTPN22	0.784	1
CBFB	PRICKLE3	0.784	1
CBFB	ANGPT4	0.784	1
CBFB	ATHL1	0.784	1
CBFB	1q-Del	0.784	1
CDKN1B	FOXA1	0.784	1
FOXA1	PRICKLE3	0.784	1
FOXA1	ANGPT4	0.784	1
FOXA1	1q-Del	0.784	1
MLL3	Del_10q26.3	0.784	1
SPRR2B	Del_6p25.3	0.784	1
ZNF41	Del_3p21.31	0.784	1
ZNF41	Del_9p21.3	0.784	1
DOCK11	Amp_19p13.12	0.784	1
FGFR2	Del_9p21.3	0.784	1
SDC1	Del_17p12	0.784	1
8p-Del	Del_2q37.3	0.784	1
9q-Del	Amp_10p15.1	0.784	1
CASP8	Amp_12p13.33	0.785	1
CASP8	Del_9q21.11	0.785	1
FBXW7	Del_5q11.2	0.785	1
HIST1H2BC	11q-Del	0.785	1
MAP3K1	TGS1	0.785	1
PIK3R1	Del_5q11.2	0.785	1
ABCA8	Del_4p16.3	0.785	1
ERBB3	Amp_1q21.3	0.785	1
HRNR	Del_12q23.1	0.785	1
UBC	Del_9q21.11	0.785	1
BCORL1	Del_5q11.2	0.785	1
BCORL1	Del_6q15	0.785	1
CCDC82	11q-Del	0.785	1
FRMPD2	Amp_12p13.33	0.785	1
TGS1	Del_9q21.11	0.785	1
7p-Amp	22q-Del	0.785	1
Amp_1q44	Amp_20q13.2	0.785	1
Amp_6p23	Amp_11q14.1	0.785	1
ARID1A	Del_16q24.3	0.786	1
CASP8	RB1	0.786	1
RB1	UBC	0.786	1
RB1	TGS1	0.786	1
1q-Amp	Amp_10p15.1	0.786	1
AARS	8p-Amp	0.787	1
AARS	18q-Del	0.787	1
EPDR1	7p-Amp	0.787	1
DLX6	7p-Amp	0.787	1
DNAH12	Del_10q23.31	0.787	1
FBXO17	7p-Amp	0.787	1
FXYD5	7p-Amp	0.787	1
SHISA4	7p-Amp	0.787	1
AKT2	7p-Amp	0.787	1
CDC42EP1	7p-Amp	0.787	1
KCNN3	18q-Del	0.787	1
MKL1	7p-Amp	0.787	1
PCNXL2	Amp_1q44	0.787	1
TCP11	16q-Del	0.787	1
8p-Amp	Amp_19p13.12	0.787	1
18q-Del	Amp_19p13.12	0.787	1
Amp_8p11.21	Amp_20q13.2	0.787	1
Del_16q24.3	Del_19q13.32	0.787	1
ACTL6B	Del_6q15	0.788	1
APC	Amp_8p11.21	0.788	1
CBFB	MLL3	0.788	1
ERBB2	Del_6q15	0.788	1
PTEN	Amp_3p25.1	0.788	1
PTEN	Del_7p22.3	0.788	1
PTPN22	Del_6q15	0.788	1
ANGPT4	Del_6q15	0.788	1
ATHL1	Del_6q15	0.788	1
PCNXL2	Del_4q35.1	0.788	1
1q-Del	Del_6q15	0.788	1
Amp_1q21.3	Amp_14q21.1	0.788	1
Amp_17q12	Amp_19q13.42	0.788	1
C1QTNF5	MAP2K4	0.789	1
CBFB	16p-Del	0.789	1
CDH1	FBXW7	0.789	1
CDH1	PIK3R1	0.789	1
CDH1	ABCA8	0.789	1
CDH1	BCORL1	0.789	1
FAM86B1	RUNX1	0.789	1
FAM86B1	Del_5q11.2	0.789	1
FBXW7	ABCA8	0.789	1
FBXW7	BCORL1	0.789	1
FOXA1	16p-Del	0.789	1
MAP2K4	PTHLH	0.789	1
MAP2K4	SMAD4	0.789	1
MAP2K4	ATXN7L1	0.789	1
MAP2K4	OR4D10	0.789	1
MAP2K4	ANKRD20A4	0.789	1
MAP2K4	MR1	0.789	1
MYB	14q-Del	0.789	1
NCOR1	Amp_1p22.3	0.789	1
PIK3R1	BCORL1	0.789	1
RUNX1	TCP10	0.789	1
RUNX1	GRHL2	0.789	1
RUNX1	GYG2	0.789	1
RUNX1	C15orf39	0.789	1
RUNX1	PSIP1	0.789	1
RUNX1	SLC35B2	0.789	1
RUNX1	USP36	0.789	1
SF3B1	MED23	0.789	1
SF3B1	ZMYM3	0.789	1
TCP10	Del_5q11.2	0.789	1
ABCA8	BCORL1	0.789	1
COL6A5	Del_10q26.3	0.789	1
DNAH12	MED23	0.789	1
DNAH12	MUC6	0.789	1
FHOD3	14q-Del	0.789	1
FHOD3	17q-Del	0.789	1
GYG2	Del_5q11.2	0.789	1
MORN1	Amp_8p11.21	0.789	1
MORN1	Del_4p16.3	0.789	1
MYH9	MED23	0.789	1
SPRR2B	Del_12p13.1	0.789	1
UBC	Del_21q11.2	0.789	1
WDR52	MED23	0.789	1
BCORL1	Del_1p22.1	0.789	1
C15orf39	Amp_8p11.21	0.789	1
FRMPD2	Amp_19q12	0.789	1
FRMPD2	Del_21q11.2	0.789	1
MED23	17p-Del	0.789	1
PSIP1	Del_4p16.3	0.789	1
TGS1	14q-Del	0.789	1
TGS1	17q-Del	0.789	1
TGS1	Del_21q11.2	0.789	1
TPP2	Amp_8p11.21	0.789	1
TPP2	Del_5q11.2	0.789	1
17q-Amp	Amp_1p22.3	0.789	1
7p-Amp	1p-Del	0.789	1
Amp_4q13.3	Del_3p21.31	0.789	1
Amp_8p11.23	Del_12q24.31	0.789	1
AARS	6q-Del	0.79	1
ARID1A	Amp_8p11.23	0.79	1
FAM20C	5p-Amp	0.79	1
FAM20C	Amp_6q21	0.79	1
FAM20C	Amp_11p13	0.79	1
FAM20C	Amp_19q13.42	0.79	1
FBXW7	Amp_6q21	0.79	1
FBXW7	Amp_11p13	0.79	1
FOXA1	Amp_1p22.3	0.79	1
HIST1H3B	11q-Del	0.79	1
HLA-DRB5	5p-Amp	0.79	1
HLA-DRB5	Amp_6q21	0.79	1
HLA-DRB5	Amp_19q13.42	0.79	1
PIK3R1	5p-Amp	0.79	1
PTHLH	17p-Del	0.79	1
RAB42	5p-Amp	0.79	1
RAB42	Amp_6q21	0.79	1
RAB42	Amp_11p13	0.79	1
RAB42	Amp_19q13.42	0.79	1
VCPIP1	6q-Del	0.79	1
ABCA8	5p-Amp	0.79	1
ABCA8	Amp_19q13.42	0.79	1
CCL13	5p-Amp	0.79	1
CCL13	Amp_6q21	0.79	1
CCL13	Amp_11p13	0.79	1
CCL13	Amp_19q13.42	0.79	1
HRNR	Del_18q23	0.79	1
NFE2L3	6q-Del	0.79	1
OR2T35	5p-Amp	0.79	1
OR2T35	Amp_6q21	0.79	1
OR2T35	Amp_11p13	0.79	1
OR2T35	Amp_19q13.42	0.79	1
PPEF1	11q-Del	0.79	1
XBP1	Amp_19q13.42	0.79	1
ZNF41	11q-Del	0.79	1
ANKRD20A4	17p-Del	0.79	1
BCORL1	Amp_6q21	0.79	1
FGFR2	11q-Del	0.79	1
OXCT2	5p-Amp	0.79	1
OXCT2	Amp_11p13	0.79	1
OXCT2	Amp_19q13.42	0.79	1
PAX2	5p-Amp	0.79	1
PAX2	Amp_6q21	0.79	1
PAX2	Amp_11p13	0.79	1
PAX2	Amp_19q13.42	0.79	1
PCNXL2	Del_16q24.3	0.79	1
RHBG	5p-Amp	0.79	1
RHBG	Amp_6q21	0.79	1
RHBG	Amp_11p13	0.79	1
RIBC1	5p-Amp	0.79	1
RIBC1	Amp_6q21	0.79	1
TTPAL	5p-Amp	0.79	1
TTPAL	Amp_6q21	0.79	1
ZBTB7C	5p-Amp	0.79	1
ZBTB7C	Amp_6q21	0.79	1
ZBTB7C	Amp_19q13.42	0.79	1
ZNF362	Amp_6q21	0.79	1
ZNF362	Amp_11p13	0.79	1
1p-Del	Amp_20q13.2	0.79	1
Amp_17q12	Del_5q21.3	0.79	1
APC	GATA3	0.791	1
APC	Del_10q26.3	0.791	1
EPDR1	Amp_3p25.1	0.791	1
EPDR1	Del_7p22.3	0.791	1
ERBB2	Del_11p15.5	0.791	1
GATA3	SF3B1	0.791	1
PTEN	20p-Amp	0.791	1
THEM5	Del_6p25.3	0.791	1
ATXN2	Del_15q13.1	0.791	1
DLX6	Amp_3p25.1	0.791	1
DLX6	Del_7p22.3	0.791	1
DNAH12	9p-Del	0.791	1
DST	7p-Amp	0.791	1
FBXO17	Amp_3p25.1	0.791	1
FBXO17	Del_7p22.3	0.791	1
FHOD3	Amp_20q13.2	0.791	1
FXYD5	Amp_3p25.1	0.791	1
FXYD5	Del_7p22.3	0.791	1
GPRIN2	Del_6p25.3	0.791	1
UBC	Amp_20q13.2	0.791	1
WDR52	9p-Del	0.791	1
AKT2	Amp_3p25.1	0.791	1
CDC42EP1	Amp_3p25.1	0.791	1
CDC42EP1	Del_7p22.3	0.791	1
FRMPD2	Amp_20q13.2	0.791	1
MED23	Del_4q35.1	0.791	1
MKL1	Amp_3p25.1	0.791	1
MKL1	Del_7p22.3	0.791	1
NBPF9	Amp_3p25.1	0.791	1
NBPF9	Del_7p22.3	0.791	1
PCNXL2	Del_12p13.1	0.791	1
RBMX	Del_4q35.1	0.791	1
SPEN	1p-Del	0.791	1
ZMYM3	Del_4q35.1	0.791	1
7q-Amp	1p-Del	0.791	1
8p-Amp	Del_5q21.3	0.791	1
Amp_1q21.3	Del_7p22.3	0.791	1
Amp_3q26.32	Amp_11q14.1	0.791	1
Amp_8p11.21	Del_17p12	0.791	1
Amp_10p15.1	Del_18q23	0.791	1
Del_1p22.1	Del_5q21.3	0.791	1
ASB10	CDH1	0.792	1
ASB10	Del_1p22.1	0.792	1
CDH1	FAM86B1	0.792	1
CDH1	TCP10	0.792	1
CDH1	MORN1	0.792	1
CDH1	SLC35B2	0.792	1
CDH1	TPP2	0.792	1
CTCF	CASZ1	0.792	1
CTCF	DLG1	0.792	1
CTCF	MLL4	0.792	1
RPGR	WSCD2	0.792	1
TAF1L	WSCD2	0.792	1
TAF1L	DLG1	0.792	1
WSCD2	ANKRD12	0.792	1
WSCD2	TNRC6B	0.792	1
ERBB3	DLG1	0.792	1
SPRR2B	1q-Amp	0.792	1
CASZ1	TNRC6B	0.792	1
DLG1	TNRC6B	0.792	1
PCNXL2	17q-Amp	0.792	1
PSIP1	Del_1p22.1	0.792	1
SDC1	1q-Amp	0.792	1
TPP2	Del_1p22.1	0.792	1
16p-Amp	Del_7p22.3	0.792	1
8p-Amp	Del_11p15.5	0.792	1
17q-Del	Amp_20q13.2	0.792	1
Amp_17q23.1	Del_12q24.31	0.792	1
ERBB2	GPS2	0.793	1
ERBB2	HIST1H3B	0.793	1
ERBB2	THEM5	0.793	1
ERBB2	GPRIN2	0.793	1
ERBB2	PPEF1	0.793	1
ERBB2	ZNF687	0.793	1
GATA3	MAP2K4	0.793	1
GPS2	DOCK11	0.793	1
HIST1H3B	DOCK11	0.793	1
NCOR1	Amp_4q13.3	0.793	1
PIWIL1	8q-Amp	0.793	1
TAF1L	8q-Amp	0.793	1
THEM5	DOCK11	0.793	1
ANKRD12	1q-Amp	0.793	1
ERBB3	1q-Amp	0.793	1
GPRIN2	DOCK11	0.793	1
CABYR	Amp_8q24.21	0.793	1
TNRC6B	8q-Amp	0.793	1
APC	1p-Del	0.794	1
FAM86B1	Amp_20q13.2	0.794	1
COL6A5	4p-Del	0.794	1
DNAH12	1p-Del	0.794	1
UBC	Amp_12q15	0.794	1
C15orf39	Amp_20q13.2	0.794	1
FRMPD2	Amp_12q15	0.794	1
FRMPD2	Del_7q36.1	0.794	1
KDM6A	Amp_14q21.1	0.794	1
SLC35B2	Amp_20q13.2	0.794	1
TGS1	8p-Del	0.794	1
1p-Del	Del_17q21.31	0.794	1
Amp_14q21.1	Del_17q21.31	0.794	1
AQP12A	16p-Del	0.795	1
ASB10	Amp_8q24.21	0.795	1
C1QTNF5	HRNR	0.795	1
C1QTNF5	Del_19p13.3	0.795	1
FAM86B1	Amp_8q24.21	0.795	1
HIST1H2BC	16p-Del	0.795	1
PTHLH	HRNR	0.795	1
SMAD4	HRNR	0.795	1
SMAD4	Del_19p13.3	0.795	1
ZFP36L2	HRNR	0.795	1
ZFP36L2	Del_19p13.3	0.795	1
ATXN7L1	HRNR	0.795	1
ATXN7L1	Del_19p13.3	0.795	1
CCNL2	HRNR	0.795	1
GYG2	Amp_8q24.21	0.795	1
HRNR	ANKRD20A4	0.795	1
ICOSLG	16p-Del	0.795	1
OR6C76	16p-Del	0.795	1
ANKRD20A4	Del_19p13.3	0.795	1
C15orf39	Amp_8q24.21	0.795	1
CABYR	16p-Del	0.795	1
CCDC82	16p-Del	0.795	1
CXCR3	16p-Del	0.795	1
RHOA	16p-Del	0.795	1
TARBP2	16p-Del	0.795	1
TCP11	16p-Del	0.795	1
16p-Amp	Del_11q23.3	0.795	1
17q-Amp	Amp_10p15.1	0.795	1
20q-Amp	Del_7q36.1	0.795	1
6q-Del	Amp_19p13.12	0.795	1
6q-Del	Del_10q23.31	0.795	1
Amp_15q26.3	Del_12q23.1	0.795	1
ASB10	8p-Del	0.796	1
CASP8	AKD1	0.796	1
FAM86B1	TBX3	0.796	1
MYB	AKD1	0.796	1
SMAD2	Del_13q14.2	0.796	1
TBX3	TCP10	0.796	1
TBX3	MORN1	0.796	1
TBX3	C15orf39	0.796	1
TBX3	USP36	0.796	1
TCP10	8p-Del	0.796	1
VCPIP1	COL6A5	0.796	1
ZFP36L1	COL6A5	0.796	1
ZFP36L2	Del_13q14.2	0.796	1
AKD1	7p-Amp	0.796	1
ATXN2	Amp_17q12	0.796	1
MORN1	8p-Del	0.796	1
WDR52	Del_3p21.31	0.796	1
EIF4A2	Del_16q24.3	0.796	1
KDM6A	Del_3p21.31	0.796	1
KDM6A	Del_9p21.3	0.796	1
PSIP1	8p-Del	0.796	1
SLC35B2	8p-Del	0.796	1
7p-Amp	Del_4p16.3	0.796	1
Amp_17q23.1	Del_2q37.3	0.796	1
ACTL6B	8q-Amp	0.797	1
EPDR1	Amp_17q12	0.797	1
HLA-DRB5	Amp_13q34	0.797	1
MAP3K1	SPRR2B	0.797	1
MAP3K1	SDC1	0.797	1
NCOR1	11p-Del	0.797	1
RAB42	Amp_13q34	0.797	1
CCL13	Amp_13q34	0.797	1
FBXO17	Amp_17q12	0.797	1
HRNR	Del_12p13.1	0.797	1
OR2T35	Amp_13q34	0.797	1
PRICKLE3	8q-Amp	0.797	1
SPRR2B	Amp_12p13.33	0.797	1
SPRR2B	Del_9q21.11	0.797	1
XBP1	Amp_13q34	0.797	1
AKT2	Amp_17q12	0.797	1
CASZ1	Del_19p13.3	0.797	1
DLG1	Del_19p13.3	0.797	1
MKL1	Amp_17q12	0.797	1
MUC6	Del_13q14.2	0.797	1
RHBG	Amp_13q34	0.797	1
RIBC1	Amp_13q34	0.797	1
SDC1	Amp_12p13.33	0.797	1
SDC1	Del_9q21.11	0.797	1
ZBTB7C	Amp_13q34	0.797	1
ZNF362	Amp_13q34	0.797	1
8p-Amp	Del_9p21.3	0.797	1
6q-Del	Amp_17q12	0.797	1
Amp_1p22.3	Amp_6q21	0.797	1
Amp_1p22.3	Amp_19q13.42	0.797	1
Amp_4q13.3	Del_9q34.2	0.797	1
APC	8p-Del	0.798	1
FAM20C	Amp_8q24.21	0.798	1
FOXA1	PTEN	0.798	1
RAB42	Amp_8q24.21	0.798	1
SF3B1	8p-Del	0.798	1
CCL13	Amp_8q24.21	0.798	1
MYH9	8p-Del	0.798	1
PAX2	Amp_8q24.21	0.798	1
RHBG	Amp_8q24.21	0.798	1
20p-Amp	11q-Del	0.798	1
6q-Del	Del_9q34.2	0.798	1
CASP8	MLL3	0.799	1
FAM20C	Amp_11q13.3	0.799	1
FAM86B1	Amp_3q26.32	0.799	1
KRAS	Amp_1q44	0.799	1
MLL3	FRMPD2	0.799	1
TCP10	Amp_3q26.32	0.799	1
CCL13	Amp_11q13.3	0.799	1
DST	Amp_1q44	0.799	1
HRNR	Del_6q27	0.799	1
OR6C76	Amp_1q44	0.799	1
ZNF41	Del_12p13.1	0.799	1
FGFR2	Del_12p13.1	0.799	1
OXCT2	Amp_11q13.3	0.799	1
PAX2	Amp_11q13.3	0.799	1
RHOA	Amp_1q44	0.799	1
RIBC1	Amp_11q13.3	0.799	1
SLC35B2	Amp_3q26.32	0.799	1
TTPAL	Amp_11q13.3	0.799	1
ZNF362	Amp_11q13.3	0.799	1
Del_12p13.1	Del_15q13.1	0.799	1
ASB10	TP53	0.8	1
C1QTNF5	Del_14q24.1	0.8	1
EPDR1	Amp_19p13.12	0.8	1
ERBB2	Del_6p25.3	0.8	1
NCOR1	11q-Del	0.8	1
PTEN	MLC1	0.8	1
PTEN	CABYR	0.8	1
PTEN	CCDC82	0.8	1
PTEN	CEP57	0.8	1
PTEN	CXCR3	0.8	1
PTEN	RHOA	0.8	1
PTEN	TCP11	0.8	1
PTHLH	Del_11p15.5	0.8	1
PTPN22	Amp_8q24.21	0.8	1
SF3B1	Del_12q23.1	0.8	1
SF3B1	Del_12q24.31	0.8	1
TCP10	TP53	0.8	1
TP53	GRHL2	0.8	1
TP53	GYG2	0.8	1
TP53	SLC35B2	0.8	1
TP53	TPP2	0.8	1
TP53	USP36	0.8	1
ZFP36L2	Del_11p15.5	0.8	1
ATXN7L1	Del_11p15.5	0.8	1
CCNL2	Del_11p15.5	0.8	1
CCNL2	Del_14q24.1	0.8	1
DLX6	Amp_19p13.12	0.8	1
DNAH12	Del_12q24.31	0.8	1
FBXO17	Amp_19p13.12	0.8	1
FXYD5	Amp_19p13.12	0.8	1
SPRR2B	14q-Del	0.8	1
SPRR2B	Amp_19q12	0.8	1
SPRR2B	Del_21q11.2	0.8	1
AKT2	Amp_19p13.12	0.8	1
ANKRD20A4	Del_11p15.5	0.8	1
CDC42EP1	Amp_19p13.12	0.8	1
DOCK11	Del_6p25.3	0.8	1
KDM6A	Del_12q24.31	0.8	1
NBPF9	Amp_19p13.12	0.8	1
SDC1	14q-Del	0.8	1
SDC1	Amp_19q12	0.8	1
5p-Amp	Amp_11p13	0.8	1
5p-Amp	Amp_19q13.42	0.8	1
1p-Del	Amp_3p25.1	0.8	1
Amp_6p23	Del_17q21.31	0.8	1
Amp_14q21.1	Del_7p22.3	0.8	1
Amp_19p13.12	Del_6q27	0.8	1
Del_6p25.3	Del_12p13.1	0.8	1
ACTL6B	PCNXL2	0.801	1
C1QTNF5	SPEN	0.801	1
C1QTNF5	7q-Amp	0.801	1
CBFB	15q-Del	0.801	1
EPDR1	PIK3CA	0.801	1
FBXW7	MED23	0.801	1
FBXW7	MUC6	0.801	1
FOXA1	Del_20p13	0.801	1
PIK3CA	FXYD5	0.801	1
PIK3CA	CDC42EP1	0.801	1
PIK3CA	NBPF9	0.801	1
PIK3R1	MED23	0.801	1
PIK3R1	MUC6	0.801	1
PTHLH	7q-Amp	0.801	1
SMAD2	7q-Amp	0.801	1
SMAD4	7q-Amp	0.801	1
TBL1XR1	PCNXL2	0.801	1
ZFP36L2	7q-Amp	0.801	1
ABCA8	MED23	0.801	1
ATXN2	5q-Del	0.801	1
ATXN7L1	7q-Amp	0.801	1
CCNL2	7q-Amp	0.801	1
OR4D10	7q-Amp	0.801	1
PRICKLE3	PCNXL2	0.801	1
ANKRD20A4	SPEN	0.801	1
ANKRD20A4	7q-Amp	0.801	1
BCORL1	MED23	0.801	1
BCORL1	MUC6	0.801	1
BCORL1	RBMX	0.801	1
MR1	7q-Amp	0.801	1
PCNXL2	1q-Del	0.801	1
TFE3	7q-Amp	0.801	1
TGS1	Del_8p23.2	0.801	1
Amp_8p11.21	Del_12q23.1	0.801	1
Amp_8p11.21	Del_12q24.31	0.801	1
ASB10	Amp_1p22.3	0.802	1
ASB10	Amp_1q44	0.802	1
FBXW7	Amp_1p22.3	0.802	1
FBXW7	Amp_13q34	0.802	1
GPS2	RB1	0.802	1
HIST1H3B	RB1	0.802	1
PIK3CA	ATHL1	0.802	1
PIK3R1	Amp_1p22.3	0.802	1
RB1	THEM5	0.802	1
RB1	GPRIN2	0.802	1
RB1	PPEF1	0.802	1
RB1	IRS4	0.802	1
RB1	ZNF687	0.802	1
TAF1L	Amp_17q23.1	0.802	1
TCP10	Amp_1p22.3	0.802	1
ABCA8	Amp_13q34	0.802	1
ABCA8	Del_6q27	0.802	1
ANKRD12	20p-Amp	0.802	1
GYG2	Amp_1q44	0.802	1
MORN1	Amp_1q44	0.802	1
SPRR2B	Amp_12q15	0.802	1
SPRR2B	Del_7q36.1	0.802	1
BCORL1	Amp_1p22.3	0.802	1
BCORL1	Del_6q27	0.802	1
C15orf39	Amp_1p22.3	0.802	1
SDC1	Amp_12q15	0.802	1
SDC1	Del_7q36.1	0.802	1
SLC35B2	Amp_1q44	0.802	1
TPP2	Amp_1p22.3	0.802	1
USP36	Amp_1p22.3	0.802	1
Amp_12q15	Del_17p12	0.802	1
APC	WSCD2	0.803	1
APC	DLG1	0.803	1
ARID1A	ASB10	0.803	1
ARID1A	FAM86B1	0.803	1
ARID1A	TCP10	0.803	1
ARID1A	GRHL2	0.803	1
ARID1A	C15orf39	0.803	1
ASB10	NF1	0.803	1
FAM20C	Amp_1q44	0.803	1
FAM86B1	NF1	0.803	1
SF3B1	WSCD2	0.803	1
SF3B1	DLG1	0.803	1
SF3B1	11q-Del	0.803	1
TBL1XR1	Del_6q27	0.803	1
WSCD2	DNAH12	0.803	1
WSCD2	MYH9	0.803	1
WSCD2	KDM6A	0.803	1
AKD1	Amp_3p25.1	0.803	1
ATXN2	16p-Amp	0.803	1
CCL13	Amp_1q44	0.803	1
DNAH12	MLL4	0.803	1
DNAH12	11q-Del	0.803	1
GRHL2	NF1	0.803	1
MYH9	DLG1	0.803	1
ANGPT4	Del_6q27	0.803	1
ATHL1	Del_6q27	0.803	1
CASZ1	Amp_15q26.3	0.803	1
DLG1	KDM6A	0.803	1
DLG1	Amp_15q26.3	0.803	1
MED23	16p-Amp	0.803	1
MLL4	Amp_15q26.3	0.803	1
NF1	SLC35B2	0.803	1
RHBG	Amp_1q44	0.803	1
RIBC1	Amp_1q44	0.803	1
TTPAL	Amp_1q44	0.803	1
8q-Amp	6q-Del	0.803	1
1q-Del	Del_6q27	0.803	1
Amp_8p11.23	Del_9q34.2	0.803	1
AARS	CBFB	0.804	1
AARS	20p-Amp	0.804	1
CBFB	VCPIP1	0.804	1
CBFB	ZFP36L1	0.804	1
CBFB	HLA-C	0.804	1
CBFB	NFE2L3	0.804	1
CBFB	EIF4A2	0.804	1
CBFB	KCNN3	0.804	1
FAM20C	1p-Del	0.804	1
FAM20C	Amp_14q21.1	0.804	1
FOXA1	VCPIP1	0.804	1
FOXA1	ZFP36L1	0.804	1
FOXA1	HLA-C	0.804	1
FOXA1	KCNN3	0.804	1
HIST1H3B	1q-Amp	0.804	1
HLA-DRB5	1p-Del	0.804	1
HLA-DRB5	Amp_14q21.1	0.804	1
RAB42	1p-Del	0.804	1
RAB42	Amp_14q21.1	0.804	1
CCL13	1p-Del	0.804	1
CCL13	Amp_14q21.1	0.804	1
COL6A5	Del_18q23	0.804	1
NFE2L3	20p-Amp	0.804	1
OR2T35	1p-Del	0.804	1
OR2T35	Amp_14q21.1	0.804	1
XBP1	1p-Del	0.804	1
ZNF41	1q-Amp	0.804	1
DLG1	Del_14q24.1	0.804	1
EIF4A2	20p-Amp	0.804	1
IRS4	1q-Amp	0.804	1
OXCT2	Amp_14q21.1	0.804	1
PAX2	1p-Del	0.804	1
PAX2	Amp_14q21.1	0.804	1
RHBG	1p-Del	0.804	1
RHBG	Amp_14q21.1	0.804	1
RIBC1	1p-Del	0.804	1
RIBC1	Amp_14q21.1	0.804	1
TTPAL	1p-Del	0.804	1
ZBTB7C	1p-Del	0.804	1
ZBTB7C	Amp_14q21.1	0.804	1
ZNF362	1p-Del	0.804	1
ZNF362	Amp_14q21.1	0.804	1
11q-Del	Del_21q11.2	0.804	1
22q-Del	Amp_12q15	0.804	1
8p-Del	Amp_3q26.32	0.804	1
Amp_1q44	Amp_12p13.33	0.804	1
AQP12A	DST	0.805	1
ASB10	Amp_10p15.1	0.805	1
FAM86B1	Amp_10p15.1	0.805	1
HIST1H2BC	DST	0.805	1
MLL3	SDC1	0.805	1
RB1	11p-Del	0.805	1
TCP10	Amp_10p15.1	0.805	1
DNAH12	8p-Amp	0.805	1
DNAH12	18q-Del	0.805	1
DST	MLC1	0.805	1
DST	CXCR3	0.805	1
GYG2	Amp_10p15.1	0.805	1
WDR52	18q-Del	0.805	1
TPP2	Amp_10p15.1	0.805	1
USP36	Amp_10p15.1	0.805	1
5p-Amp	Amp_10p15.1	0.805	1
8q-Amp	Del_19q13.32	0.805	1
14q-Del	Amp_11p13	0.805	1
5q-Del	Amp_4q13.3	0.805	1
6q-Del	Del_10q26.3	0.805	1
9p-Del	Amp_3q26.32	0.805	1
Amp_6q21	Del_21q11.2	0.805	1
CASP8	CTCF	0.806	1
CASP8	PIWIL1	0.806	1
CASP8	ERBB3	0.806	1
CTCF	MYB	0.806	1
CTCF	FHOD3	0.806	1
CTCF	UBC	0.806	1
CTCF	FRMPD2	0.806	1
CTCF	TGS1	0.806	1
MLL3	13q-Del	0.806	1
MYB	PIWIL1	0.806	1
MYB	RPGR	0.806	1
MYB	ERBB3	0.806	1
MYB	TNRC6B	0.806	1
PIWIL1	FHOD3	0.806	1
TCP10	Del_17p12	0.806	1
ANKRD12	FHOD3	0.806	1
ERBB3	FHOD3	0.806	1
ERBB3	FRMPD2	0.806	1
GYG2	Del_17p12	0.806	1
UBC	TNRC6B	0.806	1
BCORL1	Amp_10p15.1	0.806	1
FRMPD2	TNRC6B	0.806	1
TPP2	Del_17p12	0.806	1
4p-Del	Amp_10q22.3	0.806	1
8p-Del	Amp_6q21	0.806	1
Amp_3p25.1	Del_7q36.1	0.806	1
CDKN1B	Amp_1q44	0.807	1
CTCF	Del_19q13.32	0.807	1
HLA-DRB5	Del_12q23.1	0.807	1
HLA-DRB5	Del_12q24.31	0.807	1
RAB42	Del_12q23.1	0.807	1
RAB42	Del_12q24.31	0.807	1
RPGR	Del_19q13.32	0.807	1
TAF1L	Del_19q13.32	0.807	1
CCL13	Del_12q24.31	0.807	1
OR2T35	Del_12q23.1	0.807	1
OR2T35	Del_12q24.31	0.807	1
XBP1	Del_12q23.1	0.807	1
XBP1	Del_12q24.31	0.807	1
DOCK11	17q-Amp	0.807	1
PAX2	Del_12q24.31	0.807	1
PCNXL2	Amp_11q14.1	0.807	1
RBMX	20q-Amp	0.807	1
RHBG	Del_12q23.1	0.807	1
RHBG	Del_12q24.31	0.807	1
RIBC1	Del_12q23.1	0.807	1
RIBC1	Del_12q24.31	0.807	1
TNRC6B	Del_5q21.3	0.807	1
TTPAL	Del_12q23.1	0.807	1
TTPAL	Del_12q24.31	0.807	1
ZBTB7C	Del_12q23.1	0.807	1
ZBTB7C	Del_12q24.31	0.807	1
ZMYM3	Amp_11q14.1	0.807	1
ZNF362	Del_12q24.31	0.807	1
7p-Amp	Amp_1q44	0.807	1
Del_1p22.1	Del_21q11.2	0.807	1
CASP8	9q-Del	0.808	1
EPDR1	Amp_10q22.3	0.808	1
HIST1H3B	4q-Del	0.808	1
THEM5	4q-Del	0.808	1
ZFP36L1	Del_5q21.3	0.808	1
FBXO17	Amp_10q22.3	0.808	1
FHOD3	15q-Del	0.808	1
FHOD3	Del_20p13	0.808	1
FXYD5	Amp_10q22.3	0.808	1
PPEF1	4q-Del	0.808	1
SHISA4	Amp_10q22.3	0.808	1
UBC	15q-Del	0.808	1
UBC	9q-Del	0.808	1
ANKRD20A4	Amp_8p11.23	0.808	1
CDC42EP1	Amp_10q22.3	0.808	1
EIF4A2	Del_5q21.3	0.808	1
FGFR2	4q-Del	0.808	1
FRMPD2	9q-Del	0.808	1
MKL1	Amp_10q22.3	0.808	1
NBPF9	Amp_10q22.3	0.808	1
TGS1	9q-Del	0.808	1
TGS1	Del_20p13	0.808	1
1q-Amp	Amp_3p25.1	0.808	1
6q-Del	Del_7q36.1	0.808	1
Amp_1p22.3	Del_19q13.32	0.808	1
Amp_1q21.3	Del_4p16.3	0.808	1
Amp_12p13.33	Del_18q23	0.808	1
ACTL6B	Del_9q34.2	0.809	1
EPDR1	13q-Del	0.809	1
MAP2K4	17q-Del	0.809	1
PTPN22	Del_9q34.2	0.809	1
RB1	Del_19p13.3	0.809	1
TBL1XR1	11p-Del	0.809	1
COL6A5	Amp_15q26.3	0.809	1
DLX6	13q-Del	0.809	1
DNAH12	6q-Del	0.809	1
PRICKLE3	11p-Del	0.809	1
PRICKLE3	Del_9q34.2	0.809	1
SHISA4	13q-Del	0.809	1
SPRR2B	Del_11q23.3	0.809	1
ANGPT4	11p-Del	0.809	1
ATHL1	11p-Del	0.809	1
CDC42EP1	13q-Del	0.809	1
KDM6A	6q-Del	0.809	1
NBPF9	13q-Del	0.809	1
1q-Amp	Amp_6p23	0.809	1
11p-Del	1q-Del	0.809	1
Amp_10p15.1	Del_17p12	0.809	1
Amp_10q22.3	Del_11p15.5	0.809	1
ACTL6B	ERBB2	0.81	1
ACTL6B	DOCK11	0.81	1
CDKN1B	ERBB2	0.81	1
CDKN1B	DOCK11	0.81	1
ERBB2	PTPN22	0.81	1
ERBB2	PRICKLE3	0.81	1
ERBB2	ATHL1	0.81	1
ERBB2	1q-Del	0.81	1
FOXA1	Del_10q26.3	0.81	1
GATA3	15q-Del	0.81	1
TBL1XR1	DOCK11	0.81	1
HRNR	4q-Del	0.81	1
ANGPT4	DOCK11	0.81	1
ATHL1	DOCK11	0.81	1
DOCK11	1q-Del	0.81	1
FGFR2	Amp_11q13.3	0.81	1
IRS4	Amp_11q13.3	0.81	1
NF1	Del_11p15.5	0.81	1
PCNXL2	Del_3p21.31	0.81	1
7q-Amp	Del_11q23.3	0.81	1
8q-Amp	Del_14q24.1	0.81	1
16q-Del	Del_9q21.11	0.81	1
KRAS	Amp_1q21.3	0.811	1
MLL3	18q-Del	0.811	1
ZFP36L2	Del_8p23.2	0.811	1
ATXN7L1	Del_8p23.2	0.811	1
ICOSLG	Amp_1q21.3	0.811	1
OR6C76	Amp_1q21.3	0.811	1
SPRR2B	15q-Del	0.811	1
SPRR2B	9q-Del	0.811	1
SPRR2B	Del_20p13	0.811	1
PSIP1	Del_10q23.31	0.811	1
SDC1	15q-Del	0.811	1
SDC1	9q-Del	0.811	1
SDC1	Del_20p13	0.811	1
SPEN	Del_18q23	0.811	1
TCP11	Amp_1q21.3	0.811	1
TFE3	Del_8p23.2	0.811	1
20q-Amp	1p-Del	0.811	1
Amp_14q21.1	Del_6q15	0.811	1
GPS2	MAP3K1	0.812	1
GPS2	AKD1	0.812	1
HIST1H3B	Del_9q21.11	0.812	1
HLA-DRB5	Del_22q13.32	0.812	1
MAP3K1	THEM5	0.812	1
MAP3K1	PPEF1	0.812	1
MAP3K1	ZNF687	0.812	1
THEM5	AKD1	0.812	1
THEM5	Del_9q21.11	0.812	1
AKD1	GPRIN2	0.812	1
OR2T35	Del_22q13.32	0.812	1
MUC6	5p-Amp	0.812	1
MUC6	Amp_6q21	0.812	1
MUC6	Amp_8q24.21	0.812	1
MUC6	Amp_19q13.42	0.812	1
RBMX	Amp_8q24.21	0.812	1
RBMX	Amp_11p13	0.812	1
RHBG	Del_22q13.32	0.812	1
ZMYM3	5p-Amp	0.812	1
ZMYM3	Amp_6q21	0.812	1
ZMYM3	Amp_8q24.21	0.812	1
ZMYM3	Amp_11p13	0.812	1
ZMYM3	Amp_19q13.42	0.812	1
ZNF362	Del_22q13.32	0.812	1
Amp_3p25.1	Del_5q11.2	0.812	1
Amp_8p11.23	Amp_13q34	0.812	1
C1QTNF5	RUNX1	0.813	1
CASP8	Del_9p23	0.813	1
CDKN1B	17p-Del	0.813	1
EPDR1	NCOR1	0.813	1
EPDR1	17q-Amp	0.813	1
FAM20C	Amp_1q21.3	0.813	1
NCOR1	DLX6	0.813	1
NCOR1	FXYD5	0.813	1
NCOR1	MKL1	0.813	1
NCOR1	NBPF9	0.813	1
PIK3R1	Amp_14q21.1	0.813	1
PTHLH	RUNX1	0.813	1
RPGR	7p-Amp	0.813	1
RUNX1	ZFP36L2	0.813	1
RUNX1	ATXN7L1	0.813	1
RUNX1	OR4D10	0.813	1
RUNX1	ANKRD20A4	0.813	1
RUNX1	MR1	0.813	1
RUNX1	TFE3	0.813	1
TAF1L	7p-Amp	0.813	1
ABCA8	1p-Del	0.813	1
ABCA8	Amp_14q21.1	0.813	1
DLX6	Amp_4q13.3	0.813	1
DLX6	Del_6q15	0.813	1
FBXO17	Amp_4q13.3	0.813	1
FXYD5	17q-Amp	0.813	1
FXYD5	Amp_4q13.3	0.813	1
PRICKLE3	17p-Del	0.813	1
SHISA4	17q-Amp	0.813	1
SHISA4	Amp_4q13.3	0.813	1
SPRR2B	16q-Del	0.813	1
AKT2	Amp_4q13.3	0.813	1
AKT2	Del_6q15	0.813	1
CDC42EP1	17q-Amp	0.813	1
CDC42EP1	Del_6q15	0.813	1
DOCK11	Del_15q13.1	0.813	1
MED23	MUC6	0.813	1
MKL1	Amp_4q13.3	0.813	1
MUC6	ZMYM3	0.813	1
RIBC1	Amp_1q21.3	0.813	1
SDC1	16q-Del	0.813	1
TGS1	Del_9p23	0.813	1
TNRC6B	7p-Amp	0.813	1
TTPAL	Amp_1q21.3	0.813	1
ZBTB7C	Amp_1q21.3	0.813	1
Del_9q34.2	Del_21q11.2	0.813	1
AARS	Amp_17q12	0.814	1
ACTL6B	Del_1p36.13	0.814	1
ASB10	GATA3	0.814	1
ASB10	9p-Del	0.814	1
ASB10	Del_10q26.3	0.814	1
CTCF	17p-Del	0.814	1
FAM20C	Amp_8p11.21	0.814	1
FAM86B1	9p-Del	0.814	1
FBXW7	WSCD2	0.814	1
FBXW7	DLG1	0.814	1
FBXW7	MLL4	0.814	1
FBXW7	Del_10q23.31	0.814	1
GATA3	GYG2	0.814	1
GATA3	SLC35B2	0.814	1
GATA3	TPP2	0.814	1
GATA3	USP36	0.814	1
HLA-DRB5	Amp_8p11.21	0.814	1
PIK3R1	WSCD2	0.814	1
PIK3R1	DLG1	0.814	1
PIK3R1	MLL4	0.814	1
PIWIL1	17p-Del	0.814	1
SMAD4	Del_4q35.1	0.814	1
SMAD4	Del_15q13.1	0.814	1
TBL1XR1	Del_1p36.13	0.814	1
TCP10	Del_10q26.3	0.814	1
WSCD2	ABCA8	0.814	1
ABCA8	DLG1	0.814	1
ANKRD12	17p-Del	0.814	1
ATXN2	Del_5q11.2	0.814	1
CCNL2	Del_4q35.1	0.814	1
CCNL2	Del_15q13.1	0.814	1
GRHL2	9p-Del	0.814	1
GYG2	9p-Del	0.814	1
OR2T35	Amp_8p11.21	0.814	1
XBP1	Amp_8p11.21	0.814	1
ANGPT4	Del_1p36.13	0.814	1
ANKRD20A4	Del_4q35.1	0.814	1
BCORL1	CASZ1	0.814	1
C15orf39	9p-Del	0.814	1
MED23	Del_4p16.3	0.814	1
MR1	Del_4q35.1	0.814	1
PAX2	Amp_8p11.21	0.814	1
PCNXL2	Del_21q11.2	0.814	1
RBMX	Del_5q11.2	0.814	1
RHBG	Amp_8p11.21	0.814	1
SLC35B2	9p-Del	0.814	1
SLC35B2	Del_10q26.3	0.814	1
TNRC6B	17p-Del	0.814	1
TPP2	9p-Del	0.814	1
TTPAL	Amp_8p11.21	0.814	1
ZNF362	Amp_8p11.21	0.814	1
17q-Amp	Del_19p13.3	0.814	1
Amp_1p22.3	Del_2q37.3	0.814	1
Amp_6q21	Del_7q36.1	0.814	1
Amp_11p13	Amp_12q15	0.814	1
Amp_14q21.1	Del_9p23	0.814	1
FBXW7	PIK3CA	0.815	1
GATA3	Amp_1p22.3	0.815	1
GATA3	Amp_4q13.3	0.815	1
GYG2	Amp_1q21.3	0.815	1
MORN1	Amp_1q21.3	0.815	1
RBMX	13q-Del	0.815	1
TPP2	Amp_1q21.3	0.815	1
17q-Amp	22q-Del	0.815	1
17q-Amp	9p-Del	0.815	1
17q-Amp	Del_10q26.3	0.815	1
20p-Amp	Amp_15q26.3	0.815	1
8p-Amp	Del_9p23	0.815	1
16p-Del	Amp_10q22.3	0.815	1
9p-Del	Amp_4q13.3	0.815	1
Amp_8q24.21	Del_1p22.1	0.815	1
AQP12A	MAP2K4	0.816	1
FOXA1	Amp_17q12	0.816	1
GPS2	Del_21q11.2	0.816	1
HIST1H2BC	MAP2K4	0.816	1
HIST1H3B	Amp_19q12	0.816	1
MAP2K4	ICOSLG	0.816	1
MAP2K4	MLC1	0.816	1
MAP2K4	OR6C76	0.816	1
MAP2K4	CABYR	0.816	1
MAP2K4	CCDC82	0.816	1
MAP2K4	CEP57	0.816	1
MAP2K4	CXCR3	0.816	1
MAP2K4	RHOA	0.816	1
MAP2K4	TARBP2	0.816	1
MAP2K4	TCP11	0.816	1
MAP2K4	Del_7q36.1	0.816	1
PIK3CA	DST	0.816	1
TCP10	COL6A5	0.816	1
THEM5	17q-Del	0.816	1
THEM5	Amp_19q12	0.816	1
ANKRD12	Amp_6p23	0.816	1
COL6A5	SLC35B2	0.816	1
ERBB3	Amp_6p23	0.816	1
GPRIN2	Del_21q11.2	0.816	1
PPEF1	14q-Del	0.816	1
PPEF1	Amp_19q12	0.816	1
ZNF41	14q-Del	0.816	1
ZNF41	Amp_19q12	0.816	1
FGFR2	Amp_19q12	0.816	1
IRS4	17q-Del	0.816	1
IRS4	Amp_19q12	0.816	1
PCNXL2	16p-Del	0.816	1
ZNF687	17q-Del	0.816	1
ZNF687	Amp_19q12	0.816	1
18p-Del	5q-Del	0.816	1
APC	CASP8	0.817	1
APC	MYB	0.817	1
CASP8	DNAH12	0.817	1
FAM86B1	4p-Del	0.817	1
MYB	SF3B1	0.817	1
MYB	DNAH12	0.817	1
MYB	MYH9	0.817	1
MYB	WDR52	0.817	1
PIK3CA	20p-Amp	0.817	1
SF3B1	FHOD3	0.817	1
SF3B1	FRMPD2	0.817	1
TCP10	1q-Amp	0.817	1
AKD1	Amp_19p13.12	0.817	1
DNAH12	UBC	0.817	1
DST	Del_4q35.1	0.817	1
GRHL2	1q-Amp	0.817	1
HRNR	Del_9q21.11	0.817	1
MORN1	4p-Del	0.817	1
MYH9	FRMPD2	0.817	1
C15orf39	4p-Del	0.817	1
FRMPD2	KDM6A	0.817	1
OXCT2	Amp_20q13.2	0.817	1
PCNXL2	Amp_17q23.1	0.817	1
PSIP1	4p-Del	0.817	1
RHBG	Amp_20q13.2	0.817	1
RIBC1	Amp_20q13.2	0.817	1
SLC35B2	1q-Amp	0.817	1
ZBTB7C	Amp_20q13.2	0.817	1
ZNF362	Amp_20q13.2	0.817	1
20q-Amp	17p-Del	0.817	1
17q-Del	Amp_8p11.23	0.817	1
Amp_17q23.1	Del_7p22.3	0.817	1
CDH1	ZMYM3	0.818	1
CDKN1B	RB1	0.818	1
PIK3R1	9p-Del	0.818	1
PIK3R1	Del_10q26.3	0.818	1
PTPN22	RB1	0.818	1
RB1	TBL1XR1	0.818	1
RB1	ANGPT4	0.818	1
RB1	ATHL1	0.818	1
TP53	WDR52	0.818	1
ABCA8	9p-Del	0.818	1
ABCA8	Del_10q26.3	0.818	1
HRNR	Del_1p36.13	0.818	1
ZNF41	Del_16q24.3	0.818	1
BCORL1	9p-Del	0.818	1
Amp_1q44	Del_10q23.31	0.818	1
Amp_11q13.3	Del_17q21.31	0.818	1
Del_10q26.3	Del_16q24.3	0.818	1
C1QTNF5	TBX3	0.819	1
FAM20C	8p-Del	0.819	1
FBXW7	Del_12q24.31	0.819	1
MLL3	Del_3p21.31	0.819	1
MLL3	Del_9p21.3	0.819	1
PIK3R1	Del_12q23.1	0.819	1
PTHLH	TBX3	0.819	1
RB1	Del_17p12	0.819	1
SMAD4	TBX3	0.819	1
TBX3	ZFP36L2	0.819	1
TBX3	ATXN7L1	0.819	1
TBX3	CCNL2	0.819	1
TBX3	ANKRD20A4	0.819	1
ZFP36L1	PCNXL2	0.819	1
ABCA8	Del_12q23.1	0.819	1
ABCA8	Del_12q24.31	0.819	1
CCL13	8p-Del	0.819	1
HLA-C	PCNXL2	0.819	1
OR2T35	8p-Del	0.819	1
WDR52	Amp_8q24.21	0.819	1
XBP1	8p-Del	0.819	1
BCORL1	Del_12q23.1	0.819	1
OXCT2	8p-Del	0.819	1
PCNXL2	Del_7q36.1	0.819	1
RHBG	8p-Del	0.819	1
RIBC1	8p-Del	0.819	1
ZNF362	8p-Del	0.819	1
17q-Amp	Del_6p25.3	0.819	1
7p-Amp	9q-Del	0.819	1
7p-Amp	Del_20p13	0.819	1
Amp_4q13.3	Del_6p25.3	0.819	1
FOXA1	18p-Del	0.82	1
PIWIL1	Amp_3p25.1	0.82	1
PIWIL1	Del_7p22.3	0.82	1
PTPN22	Del_6p25.3	0.82	1
RPGR	Amp_3p25.1	0.82	1
TAF1L	Del_7p22.3	0.82	1
TBL1XR1	Del_6p25.3	0.82	1
TBX3	8q-Amp	0.82	1
TCP10	18p-Del	0.82	1
ANKRD12	Amp_3p25.1	0.82	1
GYG2	18p-Del	0.82	1
MORN1	18p-Del	0.82	1
ANGPT4	Del_13q14.2	0.82	1
PSIP1	18p-Del	0.82	1
TNRC6B	Del_7p22.3	0.82	1
20p-Amp	Del_9q21.11	0.82	1
5p-Amp	Del_10q23.31	0.82	1
Amp_1p22.3	Del_9q21.11	0.82	1
CTCF	GPS2	0.821	1
CTCF	HIST1H3B	0.821	1
CTCF	THEM5	0.821	1
CTCF	GPRIN2	0.821	1
CTCF	PPEF1	0.821	1
CTCF	ZNF41	0.821	1
CTCF	FGFR2	0.821	1
CTCF	IRS4	0.821	1
CTCF	ZNF687	0.821	1
GPS2	ANKRD12	0.821	1
GPS2	ERBB3	0.821	1
GPS2	TNRC6B	0.821	1
HIST1H2BC	HRNR	0.821	1
HIST1H2BC	Del_18q23	0.821	1
HIST1H3B	PIWIL1	0.821	1
HIST1H3B	RPGR	0.821	1
HIST1H3B	Amp_12q15	0.821	1
HIST1H3B	Del_7q36.1	0.821	1
PIWIL1	ZNF41	0.821	1
PIWIL1	IRS4	0.821	1
RPGR	THEM5	0.821	1
RPGR	GPRIN2	0.821	1
TAF1L	THEM5	0.821	1
TAF1L	GPRIN2	0.821	1
TAF1L	PPEF1	0.821	1
TAF1L	IRS4	0.821	1
THEM5	ANKRD12	0.821	1
THEM5	ERBB3	0.821	1
THEM5	TNRC6B	0.821	1
THEM5	Del_7q36.1	0.821	1
AKD1	Del_16q24.3	0.821	1
ANKRD12	GPRIN2	0.821	1
ANKRD12	PPEF1	0.821	1
ANKRD12	ZNF687	0.821	1
COL6A5	HRNR	0.821	1
ERBB3	GPRIN2	0.821	1
ERBB3	ZNF41	0.821	1
ERBB3	FGFR2	0.821	1
ERBB3	IRS4	0.821	1
GPRIN2	TNRC6B	0.821	1
GPRIN2	Amp_12q15	0.821	1
GPRIN2	Del_7q36.1	0.821	1
HRNR	ICOSLG	0.821	1
HRNR	OR6C76	0.821	1
HRNR	CABYR	0.821	1
HRNR	CCDC82	0.821	1
HRNR	CXCR3	0.821	1
HRNR	RHOA	0.821	1
HRNR	TARBP2	0.821	1
HRNR	TCP11	0.821	1
ICOSLG	Del_18q23	0.821	1
OR6C76	Del_18q23	0.821	1
SPRR2B	Amp_15q26.3	0.821	1
ZNF41	Amp_12q15	0.821	1
ZNF41	Del_7q36.1	0.821	1
CCDC82	Del_18q23	0.821	1
CEP57	Del_18q23	0.821	1
CXCR3	Del_18q23	0.821	1
FGFR2	TNRC6B	0.821	1
FGFR2	Amp_12q15	0.821	1
FGFR2	Del_7q36.1	0.821	1
PCNXL2	Del_1p22.1	0.821	1
SDC1	Amp_15q26.3	0.821	1
TARBP2	Del_18q23	0.821	1
ZNF687	Del_7q36.1	0.821	1
8q-Amp	Del_16q24.3	0.821	1
FAM20C	Del_19q13.32	0.822	1
HLA-DRB5	Del_19q13.32	0.822	1
NCOR1	RB1	0.822	1
PTHLH	16p-Amp	0.822	1
RAB42	Del_19q13.32	0.822	1
SMAD2	16p-Amp	0.822	1
TBL1XR1	Amp_1q21.3	0.822	1
ZFP36L2	16p-Amp	0.822	1
ABCA8	4p-Del	0.822	1
AKD1	Del_2q37.3	0.822	1
ATXN2	Amp_13q34	0.822	1
CCL13	Del_19q13.32	0.822	1
OR4D10	16p-Amp	0.822	1
XBP1	Del_19q13.32	0.822	1
ANKRD20A4	16p-Amp	0.822	1
DLG1	Del_4q35.1	0.822	1
DOCK11	4q-Del	0.822	1
MLL4	Del_4q35.1	0.822	1
MR1	16p-Amp	0.822	1
OXCT2	Del_19q13.32	0.822	1
RHBG	Del_19q13.32	0.822	1
RIBC1	Del_19q13.32	0.822	1
TTPAL	Del_19q13.32	0.822	1
ZBTB7C	Del_19q13.32	0.822	1
17q-Amp	Amp_11p13	0.822	1
1q-Amp	11p-Del	0.822	1
20p-Amp	Amp_19p13.12	0.822	1
5p-Amp	Amp_4q13.3	0.822	1
Amp_14q21.1	Amp_19p13.12	0.822	1
ARID1A	Del_3p21.31	0.823	1
ASB10	CBFB	0.823	1
ASB10	FOXA1	0.823	1
CBFB	FAM86B1	0.823	1
CBFB	TCP10	0.823	1
CBFB	C15orf39	0.823	1
CBFB	SLC35B2	0.823	1
CBFB	USP36	0.823	1
FAM86B1	FOXA1	0.823	1
FAM86B1	8p-Amp	0.823	1
FOXA1	TCP10	0.823	1
FOXA1	MORN1	0.823	1
FOXA1	C15orf39	0.823	1
FOXA1	SLC35B2	0.823	1
FOXA1	TPP2	0.823	1
HIST1H2BC	Del_17q21.31	0.823	1
MLL3	5p-Amp	0.823	1
TCP10	18q-Del	0.823	1
FBXO17	Del_6q27	0.823	1
GYG2	8p-Amp	0.823	1
GYG2	18q-Del	0.823	1
HRNR	14q-Del	0.823	1
HRNR	Amp_19q12	0.823	1
HRNR	Del_21q11.2	0.823	1
ICOSLG	Del_17q21.31	0.823	1
MORN1	8p-Amp	0.823	1
MORN1	18q-Del	0.823	1
OR6C76	Del_17q21.31	0.823	1
C15orf39	8p-Amp	0.823	1
CABYR	Del_17q21.31	0.823	1
CCDC82	Del_17q21.31	0.823	1
MLL4	5q-Del	0.823	1
NF1	Del_9p21.3	0.823	1
PSIP1	8p-Amp	0.823	1
SLC35B2	8p-Amp	0.823	1
SLC35B2	18q-Del	0.823	1
SPEN	Del_10q23.31	0.823	1
TPP2	8p-Amp	0.823	1
8p-Amp	16q-Del	0.823	1
11p-Del	Amp_12q15	0.823	1
18q-Del	Del_6p25.3	0.823	1
Amp_1q21.3	Del_5q21.3	0.823	1
Amp_1q44	Amp_11q14.1	0.823	1
Amp_12q15	Del_14q24.1	0.823	1
Del_7q36.1	Del_14q24.1	0.823	1
CASP8	22q-Del	0.824	1
MLL3	Del_5q11.2	0.824	1
PTEN	PCNXL2	0.824	1
DST	22q-Del	0.824	1
20p-Amp	1p-Del	0.824	1
13q-Del	Amp_19q13.42	0.824	1
18q-Del	5q-Del	0.824	1
Amp_11p13	Del_13q14.2	0.824	1
Amp_14q21.1	Del_5q11.2	0.824	1
ACTL6B	Del_9p21.3	0.825	1
ARID1A	C1QTNF5	0.825	1
ARID1A	ANKRD20A4	0.825	1
C1QTNF5	NF1	0.825	1
C1QTNF5	20q-Amp	0.825	1
C1QTNF5	Amp_11q14.1	0.825	1
FAM20C	7p-Amp	0.825	1
FOXA1	8p-Amp	0.825	1
FOXA1	18q-Del	0.825	1
MLL3	GPRIN2	0.825	1
MLL3	PPEF1	0.825	1
MLL3	FGFR2	0.825	1
MLL3	IRS4	0.825	1
MLL3	ZNF687	0.825	1
MLL3	Amp_1q44	0.825	1
RAB42	7p-Amp	0.825	1
RB1	Del_22q13.32	0.825	1
SMAD4	20q-Amp	0.825	1
TBL1XR1	Del_3p21.31	0.825	1
TCP10	Amp_17q23.1	0.825	1
WSCD2	ATXN2	0.825	1
WSCD2	MED23	0.825	1
WSCD2	MUC6	0.825	1
WSCD2	RBMX	0.825	1
WSCD2	ZMYM3	0.825	1
ATXN2	DLG1	0.825	1
ATXN7L1	20q-Amp	0.825	1
ATXN7L1	Amp_11q14.1	0.825	1
CCNL2	20q-Amp	0.825	1
CCNL2	Amp_11q14.1	0.825	1
OR2T35	7p-Amp	0.825	1
PRICKLE3	Del_3p21.31	0.825	1
PRICKLE3	Del_9p21.3	0.825	1
ANKRD20A4	NF1	0.825	1
BCORL1	Del_22q13.32	0.825	1
CASZ1	MED23	0.825	1
DLG1	MED23	0.825	1
DLG1	MUC6	0.825	1
DLG1	RBMX	0.825	1
DLG1	ZMYM3	0.825	1
MED23	MLL4	0.825	1
MLL4	RBMX	0.825	1
NF1	TFE3	0.825	1
OXCT2	7p-Amp	0.825	1
PAX2	7p-Amp	0.825	1
RHBG	7p-Amp	0.825	1
RIBC1	7p-Amp	0.825	1
SPEN	Del_16q24.3	0.825	1
TFE3	Amp_11q14.1	0.825	1
TPP2	Amp_17q23.1	0.825	1
TTPAL	7p-Amp	0.825	1
ZBTB7C	7p-Amp	0.825	1
ZNF362	7p-Amp	0.825	1
16p-Amp	15q-Del	0.825	1
17q-Amp	16p-Del	0.825	1
20p-Amp	Del_2q37.3	0.825	1
20q-Amp	Del_12q23.1	0.825	1
13q-Del	Amp_4q13.3	0.825	1
APC	Del_17p12	0.826	1
CASP8	Amp_15q26.3	0.826	1
HIST1H2BC	SPEN	0.826	1
HIST1H2BC	7q-Amp	0.826	1
KRAS	7q-Amp	0.826	1
RUNX1	Del_12q23.1	0.826	1
RUNX1	Del_12q24.31	0.826	1
SF3B1	20p-Amp	0.826	1
AKD1	Amp_8q24.21	0.826	1
FBXO17	16p-Del	0.826	1
FHOD3	Amp_15q26.3	0.826	1
ICOSLG	SPEN	0.826	1
ICOSLG	7q-Amp	0.826	1
MLC1	SPEN	0.826	1
MLC1	7q-Amp	0.826	1
MYH9	Del_17p12	0.826	1
OR6C76	SPEN	0.826	1
OR6C76	7q-Amp	0.826	1
UBC	Amp_15q26.3	0.826	1
AKT2	16p-Del	0.826	1
BCORL1	18p-Del	0.826	1
CABYR	7q-Amp	0.826	1
CCDC82	7q-Amp	0.826	1
CDC42EP1	16p-Del	0.826	1
CEP57	SPEN	0.826	1
CEP57	7q-Amp	0.826	1
KDM6A	20p-Amp	0.826	1
MKL1	16p-Del	0.826	1
RHOA	7q-Amp	0.826	1
SPEN	TARBP2	0.826	1
TARBP2	7q-Amp	0.826	1
TCP11	7q-Amp	0.826	1
ACTL6B	AKD1	0.827	1
ARID1A	RUNX1	0.827	1
CASP8	FBXW7	0.827	1
CASP8	PIK3R1	0.827	1
CASP8	BCORL1	0.827	1
CDKN1B	AKD1	0.827	1
ERBB2	MAP3K1	0.827	1
ERBB2	VCPIP1	0.827	1
ERBB2	HLA-C	0.827	1
ERBB2	NFE2L3	0.827	1
ERBB2	KCNN3	0.827	1
ERBB2	Del_9q21.11	0.827	1
FAM86B1	6q-Del	0.827	1
FBXW7	MYB	0.827	1
FBXW7	TGS1	0.827	1
MAP2K4	8p-Del	0.827	1
MYB	PIK3R1	0.827	1
MYB	BCORL1	0.827	1
PIK3R1	UBC	0.827	1
PIWIL1	Del_18q23	0.827	1
RPGR	Del_18q23	0.827	1
RUNX1	NF1	0.827	1
TBL1XR1	AKD1	0.827	1
TCP10	6q-Del	0.827	1
VCPIP1	DOCK11	0.827	1
ZFP36L1	DOCK11	0.827	1
AKD1	PRICKLE3	0.827	1
ANKRD12	Del_18q23	0.827	1
DST	Amp_1q21.3	0.827	1
FHOD3	BCORL1	0.827	1
HLA-C	DOCK11	0.827	1
MORN1	6q-Del	0.827	1
NFE2L3	DOCK11	0.827	1
BCORL1	TGS1	0.827	1
DOCK11	KCNN3	0.827	1
DOCK11	Del_9q21.11	0.827	1
16q-Del	Del_19q13.32	0.827	1
9p-Del	Amp_6q21	0.827	1
Amp_6p23	Amp_11q13.3	0.827	1
AARS	13q-Del	0.828	1
ACTL6B	Del_12p13.1	0.828	1
CBFB	Del_22q13.32	0.828	1
ABCA8	Del_9p21.3	0.828	1
HLA-C	13q-Del	0.828	1
NFE2L3	13q-Del	0.828	1
ANGPT4	Del_12p13.1	0.828	1
BCORL1	Del_3p21.31	0.828	1
EIF4A2	13q-Del	0.828	1
5p-Amp	Amp_11q13.3	0.828	1
8p-Amp	Del_16q24.3	0.828	1
Amp_6q21	Amp_11q13.3	0.828	1
Amp_10p15.1	Del_9q21.11	0.828	1
FAM20C	Amp_3p25.1	0.829	1
FAM20C	Del_7p22.3	0.829	1
GATA3	7q-Amp	0.829	1
GPS2	Del_22q13.32	0.829	1
HLA-DRB5	Amp_3p25.1	0.829	1
HLA-DRB5	Del_7p22.3	0.829	1
NCOR1	Del_11q23.3	0.829	1
PTHLH	Amp_11q13.3	0.829	1
RAB42	Amp_3p25.1	0.829	1
RAB42	Del_7p22.3	0.829	1
SMAD4	Amp_11q13.3	0.829	1
ATXN7L1	Amp_11q13.3	0.829	1
CCL13	Amp_3p25.1	0.829	1
CCL13	Del_7p22.3	0.829	1
CCNL2	Amp_11q13.3	0.829	1
GPRIN2	Del_22q13.32	0.829	1
OR2T35	Amp_3p25.1	0.829	1
OR2T35	Del_7p22.3	0.829	1
XBP1	Amp_3p25.1	0.829	1
XBP1	Del_7p22.3	0.829	1
FGFR2	Del_22q13.32	0.829	1
OXCT2	Amp_3p25.1	0.829	1
PAX2	Amp_3p25.1	0.829	1
PAX2	Del_7p22.3	0.829	1
RBMX	Amp_1p22.3	0.829	1
RHBG	Amp_3p25.1	0.829	1
RIBC1	Amp_3p25.1	0.829	1
RIBC1	Del_7p22.3	0.829	1
SPEN	Del_10q26.3	0.829	1
TFE3	Amp_11q13.3	0.829	1
TTPAL	Amp_3p25.1	0.829	1
TTPAL	Del_7p22.3	0.829	1
ZBTB7C	Amp_3p25.1	0.829	1
ZBTB7C	Del_7p22.3	0.829	1
ZMYM3	Amp_1p22.3	0.829	1
ZNF362	Amp_3p25.1	0.829	1
ZNF362	Del_7p22.3	0.829	1
17q-Amp	Del_11q23.3	0.829	1
18q-Del	Amp_8p11.23	0.829	1
22q-Del	5q-Del	0.829	1
Del_6q15	Del_12q24.31	0.829	1
APC	7p-Amp	0.83	1
C1QTNF5	Del_4p16.3	0.83	1
CASP8	Amp_1q21.3	0.83	1
ERBB2	16p-Del	0.83	1
ERBB2	Amp_11q14.1	0.83	1
FBXW7	8p-Amp	0.83	1
HIST1H2BC	Del_9p23	0.83	1
PIK3R1	18q-Del	0.83	1
SMAD4	Del_5q11.2	0.83	1
TBL1XR1	11q-Del	0.83	1
ZFP36L2	Del_5q11.2	0.83	1
ATXN7L1	Del_4p16.3	0.83	1
CCNL2	Del_4p16.3	0.83	1
CCNL2	Del_5q11.2	0.83	1
COL6A5	7q-Amp	0.83	1
FHOD3	Amp_1q21.3	0.83	1
FXYD5	Del_1p36.13	0.83	1
PRICKLE3	11q-Del	0.83	1
UBC	Amp_1q21.3	0.83	1
WDR52	7p-Amp	0.83	1
AKT2	Del_1p36.13	0.83	1
ANKRD20A4	Del_4p16.3	0.83	1
ANKRD20A4	Del_5q11.2	0.83	1
BCORL1	18q-Del	0.83	1
CCDC82	Del_9p23	0.83	1
CDC42EP1	Del_1p36.13	0.83	1
DOCK11	16p-Del	0.83	1
KDM6A	Del_5q21.3	0.83	1
MKL1	Del_1p36.13	0.83	1
MR1	Del_4p16.3	0.83	1
MR1	Del_5q11.2	0.83	1
RHOA	Del_9p23	0.83	1
TGS1	Amp_1q21.3	0.83	1
15q-Del	Amp_3p25.1	0.83	1
Amp_6q21	Del_18q23	0.83	1
Amp_11q14.1	Amp_19p13.12	0.83	1
APC	HIST1H3B	0.831	1
APC	THEM5	0.831	1
CDH1	MLL3	0.831	1
CTCF	Del_11q23.3	0.831	1
EPDR1	PTEN	0.831	1
GPS2	SF3B1	0.831	1
GPS2	MYH9	0.831	1
GPS2	WDR52	0.831	1
GPS2	KDM6A	0.831	1
HIST1H3B	SF3B1	0.831	1
HIST1H3B	DNAH12	0.831	1
HIST1H3B	WDR52	0.831	1
PIWIL1	Del_17q21.31	0.831	1
PTEN	DLX6	0.831	1
PTEN	FBXO17	0.831	1
PTEN	FXYD5	0.831	1
PTEN	SHISA4	0.831	1
PTEN	AKT2	0.831	1
PTEN	CDC42EP1	0.831	1
PTEN	NBPF9	0.831	1
SF3B1	THEM5	0.831	1
SF3B1	GPRIN2	0.831	1
SF3B1	ZNF41	0.831	1
SF3B1	FGFR2	0.831	1
SF3B1	IRS4	0.831	1
SF3B1	ZNF687	0.831	1
TBX3	11p-Del	0.831	1
THEM5	DNAH12	0.831	1
THEM5	MYH9	0.831	1
THEM5	KDM6A	0.831	1
ANKRD12	Del_11q23.3	0.831	1
GPRIN2	MYH9	0.831	1
GPRIN2	KDM6A	0.831	1
MYH9	ZNF41	0.831	1
MYH9	FGFR2	0.831	1
ZNF41	KDM6A	0.831	1
FGFR2	KDM6A	0.831	1
Amp_3p25.1	Del_22q13.32	0.831	1
Amp_14q21.1	Del_5q21.3	0.831	1
Amp_19p13.12	Del_7q36.1	0.831	1
ARID1A	Amp_13q34	0.832	1
ERBB2	14q-Del	0.832	1
GPS2	Amp_8p11.21	0.832	1
WSCD2	16p-Amp	0.832	1
SPRR2B	5q-Del	0.832	1
ZNF41	Amp_8p11.21	0.832	1
CASZ1	16p-Amp	0.832	1
DOCK11	17q-Del	0.832	1
DOCK11	Amp_19q12	0.832	1
SDC1	5q-Del	0.832	1
20p-Amp	Del_19p13.3	0.832	1
8q-Amp	Del_6p25.3	0.832	1
11q-Del	Amp_15q26.3	0.832	1
ACTL6B	Amp_8p11.23	0.833	1
CBFB	HRNR	0.833	1
CDH1	PTHLH	0.833	1
CDH1	SMAD4	0.833	1
CDH1	ATXN7L1	0.833	1
CDH1	CCNL2	0.833	1
FBXW7	Amp_20q13.2	0.833	1
GPS2	Del_20p13	0.833	1
HIST1H3B	15q-Del	0.833	1
HIST1H3B	9q-Del	0.833	1
HIST1H3B	Del_20p13	0.833	1
PIK3R1	Amp_20q13.2	0.833	1
PTHLH	Del_1p22.1	0.833	1
SMAD2	Del_1p22.1	0.833	1
TAF1L	Amp_19p13.12	0.833	1
THEM5	9q-Del	0.833	1
TP53	AKT2	0.833	1
TP53	NBPF9	0.833	1
VCPIP1	Del_6q15	0.833	1
ABCA8	Amp_20q13.2	0.833	1
ATXN2	Amp_14q21.1	0.833	1
ATXN7L1	Del_1p22.1	0.833	1
GPRIN2	9q-Del	0.833	1
HRNR	6q-Del	0.833	1
NFE2L3	Del_6q15	0.833	1
OR4D10	Del_1p22.1	0.833	1
PRICKLE3	Amp_8p11.23	0.833	1
ZNF41	Del_20p13	0.833	1
ATHL1	Amp_8p11.23	0.833	1
BCORL1	Amp_20q13.2	0.833	1
CASZ1	5p-Amp	0.833	1
FGFR2	15q-Del	0.833	1
IRS4	Del_20p13	0.833	1
MED23	1p-Del	0.833	1
MED23	Amp_14q21.1	0.833	1
MLL4	5p-Amp	0.833	1
MLL4	Amp_6q21	0.833	1
MLL4	Amp_11p13	0.833	1
MUC6	1p-Del	0.833	1
RBMX	1p-Del	0.833	1
RBMX	Amp_14q21.1	0.833	1
ZMYM3	Amp_10p15.1	0.833	1
ZNF687	Del_20p13	0.833	1
17q-Amp	Del_12p13.1	0.833	1
11q-Del	Del_12p13.1	0.833	1
14q-Del	Amp_1q44	0.833	1
15q-Del	Amp_11q14.1	0.833	1
1q-Del	Amp_8p11.23	0.833	1
9q-Del	Del_7q36.1	0.833	1
Amp_11q14.1	Del_20p13	0.833	1
Amp_19q13.42	Del_11q23.3	0.833	1
CBFB	8q-Amp	0.834	1
GPS2	Del_11q23.3	0.834	1
HIST1H3B	Del_11q23.3	0.834	1
THEM5	Del_11q23.3	0.834	1
ABCA8	6q-Del	0.834	1
BCORL1	6q-Del	0.834	1
MLL4	17p-Del	0.834	1
PCNXL2	Amp_1p22.3	0.834	1
5p-Amp	Del_15q13.1	0.834	1
7p-Amp	Del_8p23.2	0.834	1
8p-Amp	Del_20p13	0.834	1
11q-Del	Del_4q35.1	0.834	1
4q-Del	Amp_10q22.3	0.834	1
AARS	RB1	0.835	1
CDKN1B	4q-Del	0.835	1
GPS2	Del_18q23	0.835	1
HIST1H3B	Del_18q23	0.835	1
PIK3R1	11q-Del	0.835	1
RB1	VCPIP1	0.835	1
RB1	ZFP36L1	0.835	1
RB1	NFE2L3	0.835	1
RB1	EIF4A2	0.835	1
RB1	KCNN3	0.835	1
TBL1XR1	4q-Del	0.835	1
THEM5	Del_18q23	0.835	1
VCPIP1	Del_2q37.3	0.835	1
WSCD2	Amp_11q14.1	0.835	1
COL6A5	5q-Del	0.835	1
COL6A5	Del_5q21.3	0.835	1
DLX6	DST	0.835	1
DST	AKT2	0.835	1
DST	NBPF9	0.835	1
HLA-C	Del_2q37.3	0.835	1
HRNR	17p-Del	0.835	1
HRNR	Del_7p22.3	0.835	1
NFE2L3	Del_2q37.3	0.835	1
PRICKLE3	4q-Del	0.835	1
WDR52	8q-Amp	0.835	1
ANGPT4	4q-Del	0.835	1
BCORL1	11q-Del	0.835	1
EIF4A2	Del_2q37.3	0.835	1
ZNF687	Del_18q23	0.835	1
18p-Del	Del_12p13.1	0.835	1
Amp_4q13.3	Del_13q14.2	0.835	1
Amp_12q15	Amp_17q12	0.835	1
ACTL6B	PIWIL1	0.836	1
ACTL6B	RPGR	0.836	1
ACTL6B	TAF1L	0.836	1
ACTL6B	ANKRD12	0.836	1
ACTL6B	ERBB3	0.836	1
ACTL6B	TNRC6B	0.836	1
CASP8	Del_11p15.5	0.836	1
CDKN1B	TAF1L	0.836	1
CTCF	TBL1XR1	0.836	1
CTCF	PRICKLE3	0.836	1
CTCF	ANGPT4	0.836	1
CTCF	ATHL1	0.836	1
ERBB2	17p-Del	0.836	1
FAM20C	Amp_19p13.12	0.836	1
HIST1H3B	Amp_20q13.2	0.836	1
HLA-DRB5	22q-Del	0.836	1
HLA-DRB5	Amp_19p13.12	0.836	1
MLL3	HRNR	0.836	1
PIWIL1	TBL1XR1	0.836	1
PIWIL1	PRICKLE3	0.836	1
PIWIL1	1q-Del	0.836	1
PTPN22	TAF1L	0.836	1
RAB42	Amp_19p13.12	0.836	1
RPGR	TBL1XR1	0.836	1
RPGR	PRICKLE3	0.836	1
RPGR	1q-Del	0.836	1
SF3B1	Amp_3p25.1	0.836	1
TAF1L	TBL1XR1	0.836	1
TAF1L	ATHL1	0.836	1
TAF1L	1q-Del	0.836	1
TBL1XR1	TNRC6B	0.836	1
ANKRD12	PRICKLE3	0.836	1
ANKRD12	ANGPT4	0.836	1
ANKRD12	ATHL1	0.836	1
ANKRD12	1q-Del	0.836	1
CCL13	Amp_19p13.12	0.836	1
DNAH12	Amp_3p25.1	0.836	1
DNAH12	Del_7p22.3	0.836	1
ERBB3	ANGPT4	0.836	1
ERBB3	1q-Del	0.836	1
FHOD3	Del_11p15.5	0.836	1
FHOD3	Del_14q24.1	0.836	1
OR2T35	Amp_19p13.12	0.836	1
PRICKLE3	TNRC6B	0.836	1
UBC	Del_11p15.5	0.836	1
WDR52	Amp_3p25.1	0.836	1
WDR52	Del_7p22.3	0.836	1
XBP1	Amp_19p13.12	0.836	1
ZNF41	Amp_20q13.2	0.836	1
IRS4	Amp_20q13.2	0.836	1
KDM6A	Amp_3p25.1	0.836	1
OXCT2	Amp_19p13.12	0.836	1
PAX2	Amp_19p13.12	0.836	1
PCNXL2	15q-Del	0.836	1
PCNXL2	Del_20p13	0.836	1
RHBG	Amp_19p13.12	0.836	1
RIBC1	Amp_19p13.12	0.836	1
TGS1	Del_11p15.5	0.836	1
TGS1	Del_14q24.1	0.836	1
TNRC6B	1q-Del	0.836	1
TTPAL	Amp_19p13.12	0.836	1
ZBTB7C	Amp_19p13.12	0.836	1
ZNF362	Amp_19p13.12	0.836	1
1q-Amp	20q-Amp	0.836	1
20p-Amp	Del_12q23.1	0.836	1
APC	Amp_17q23.1	0.837	1
AQP12A	RUNX1	0.837	1
ARID1A	TBX3	0.837	1
C1QTNF5	COL6A5	0.837	1
CASP8	PIK3CA	0.837	1
ERBB2	Amp_12q15	0.837	1
ERBB2	Del_3p21.31	0.837	1
ERBB2	Del_7q36.1	0.837	1
HIST1H2BC	RUNX1	0.837	1
KRAS	RUNX1	0.837	1
PTHLH	COL6A5	0.837	1
RUNX1	ICOSLG	0.837	1
RUNX1	MLC1	0.837	1
RUNX1	OR6C76	0.837	1
RUNX1	CABYR	0.837	1
RUNX1	CEP57	0.837	1
RUNX1	CXCR3	0.837	1
RUNX1	TARBP2	0.837	1
TBX3	NF1	0.837	1
WSCD2	CASZ1	0.837	1
WSCD2	MLL4	0.837	1
ZFP36L2	COL6A5	0.837	1
AKD1	17q-Amp	0.837	1
COL6A5	ANKRD20A4	0.837	1
COL6A5	TFE3	0.837	1
DLX6	Del_17p12	0.837	1
SHISA4	Del_17p12	0.837	1
AKT2	Del_17p12	0.837	1
CASZ1	DLG1	0.837	1
CDC42EP1	Del_17p12	0.837	1
DLG1	MLL4	0.837	1
DOCK11	Amp_12q15	0.837	1
KDM6A	Amp_17q23.1	0.837	1
NBPF9	Del_17p12	0.837	1
ASB10	PCNXL2	0.838	1
C1QTNF5	Amp_3q26.32	0.838	1
EPDR1	Del_3p21.31	0.838	1
EPDR1	Del_9p21.3	0.838	1
ERBB2	PTEN	0.838	1
FAM86B1	PCNXL2	0.838	1
GPS2	Del_17q21.31	0.838	1
HIST1H3B	Del_17q21.31	0.838	1
MYB	ATXN2	0.838	1
MYB	MED23	0.838	1
MYB	MUC6	0.838	1
MYB	RBMX	0.838	1
PIK3CA	CCNL2	0.838	1
PIK3CA	ANKRD20A4	0.838	1
PIK3CA	TFE3	0.838	1
PTEN	DOCK11	0.838	1
PTHLH	Amp_3q26.32	0.838	1
SMAD4	Amp_3q26.32	0.838	1
THEM5	Del_17q21.31	0.838	1
ATXN2	Del_12q23.1	0.838	1
ATXN2	Del_12q24.31	0.838	1
ERBB3	16q-Del	0.838	1
FHOD3	MED23	0.838	1
FHOD3	MUC6	0.838	1
FHOD3	ZMYM3	0.838	1
GPRIN2	Del_17q21.31	0.838	1
SHISA4	Del_9p21.3	0.838	1
SPRR2B	5p-Amp	0.838	1
SPRR2B	Amp_6q21	0.838	1
SPRR2B	Amp_11p13	0.838	1
SPRR2B	Amp_19q13.42	0.838	1
UBC	MED23	0.838	1
UBC	RBMX	0.838	1
ZNF41	Del_17q21.31	0.838	1
AKT2	Del_3p21.31	0.838	1
ANKRD20A4	Amp_3q26.32	0.838	1
C15orf39	PCNXL2	0.838	1
DLG1	Del_16q24.3	0.838	1
FRMPD2	MED23	0.838	1
IRS4	Del_17q21.31	0.838	1
MED23	TGS1	0.838	1
MED23	16q-Del	0.838	1
MED23	Del_12q23.1	0.838	1
MKL1	Del_3p21.31	0.838	1
MKL1	Del_9p21.3	0.838	1
MUC6	16q-Del	0.838	1
NBPF9	Del_9p21.3	0.838	1
PCNXL2	SLC35B2	0.838	1
PCNXL2	USP36	0.838	1
RBMX	TGS1	0.838	1
RBMX	Del_12q24.31	0.838	1
SDC1	5p-Amp	0.838	1
SDC1	Amp_11p13	0.838	1
SDC1	Amp_19q13.42	0.838	1
TGS1	ZMYM3	0.838	1
ZMYM3	Del_12q23.1	0.838	1
ZNF687	Del_17q21.31	0.838	1
7q-Amp	17q-Del	0.838	1
AARS	11p-Del	0.839	1
MAP3K1	PTPN22	0.839	1
MAP3K1	ATHL1	0.839	1
MAP3K1	1q-Del	0.839	1
PTPN22	Del_9q21.11	0.839	1
THEM5	8p-Del	0.839	1
VCPIP1	Del_8p23.2	0.839	1
VCPIP1	Del_9q34.2	0.839	1
ZFP36L1	Del_9q34.2	0.839	1
GYG2	20p-Amp	0.839	1
NFE2L3	11p-Del	0.839	1
ANGPT4	Del_9q21.11	0.839	1
EIF4A2	11p-Del	0.839	1
IRS4	8p-Del	0.839	1
PSIP1	20p-Amp	0.839	1
RIBC1	Amp_17q23.1	0.839	1
SLC35B2	20p-Amp	0.839	1
SPEN	7p-Amp	0.839	1
TNRC6B	Amp_8p11.23	0.839	1
TPP2	20p-Amp	0.839	1
USP36	20p-Amp	0.839	1
ZBTB7C	Amp_17q23.1	0.839	1
ZNF687	8p-Del	0.839	1
1q-Del	Del_9q21.11	0.839	1
Amp_14q21.1	Del_6q27	0.839	1
FBXW7	GPS2	0.84	1
FBXW7	HIST1H3B	0.84	1
FBXW7	THEM5	0.84	1
GPS2	PIK3R1	0.84	1
GPS2	ABCA8	0.84	1
GPS2	BCORL1	0.84	1
HIST1H3B	PIK3R1	0.84	1
HIST1H3B	ABCA8	0.84	1
NCOR1	16q-Del	0.84	1
PIK3R1	THEM5	0.84	1
PIK3R1	GPRIN2	0.84	1
THEM5	ABCA8	0.84	1
THEM5	BCORL1	0.84	1
ABCA8	GPRIN2	0.84	1
ABCA8	ZNF41	0.84	1
ABCA8	FGFR2	0.84	1
ABCA8	IRS4	0.84	1
GPRIN2	BCORL1	0.84	1
PPEF1	BCORL1	0.84	1
ZNF41	BCORL1	0.84	1
BCORL1	FGFR2	0.84	1
BCORL1	IRS4	0.84	1
20p-Amp	Amp_8p11.21	0.84	1
5p-Amp	15q-Del	0.84	1
5p-Amp	9q-Del	0.84	1
7p-Amp	Del_11q23.3	0.84	1
15q-Del	Amp_11p13	0.84	1
4p-Del	Del_16q24.3	0.84	1
Amp_11p13	Amp_14q21.1	0.84	1
AQP12A	Del_19p13.3	0.841	1
CBFB	SPEN	0.841	1
ERBB2	16q-Del	0.841	1
FOXA1	SPEN	0.841	1
FOXA1	8p-Del	0.841	1
HIST1H2BC	Del_19p13.3	0.841	1
RPGR	Del_9p23	0.841	1
SMAD4	Amp_1p22.3	0.841	1
ZFP36L2	Amp_1p22.3	0.841	1
AKD1	13q-Del	0.841	1
ERBB3	Del_9p23	0.841	1
ICOSLG	Del_19p13.3	0.841	1
CCDC82	Del_19p13.3	0.841	1
MLL4	Del_13q14.2	0.841	1
TARBP2	Del_19p13.3	0.841	1
TFE3	Amp_1p22.3	0.841	1
20p-Amp	Del_7q36.1	0.841	1
Amp_14q21.1	Del_9q21.11	0.841	1
CDH1	11q-Del	0.842	1
EPDR1	11q-Del	0.842	1
FAM86B1	Del_5q21.3	0.842	1
MLL3	DOCK11	0.842	1
PIK3R1	Del_19q13.32	0.842	1
TCP10	Del_5q21.3	0.842	1
DLX6	11q-Del	0.842	1
MORN1	Del_5q21.3	0.842	1
MORN1	Del_11q23.3	0.842	1
BCORL1	Del_19q13.32	0.842	1
CASZ1	Amp_13q34	0.842	1
MKL1	11q-Del	0.842	1
MLL4	Amp_13q34	0.842	1
MLL4	Del_5q11.2	0.842	1
SLC35B2	Del_5q21.3	0.842	1
SLC35B2	Del_11q23.3	0.842	1
TPP2	Del_5q21.3	0.842	1
TPP2	Del_11q23.3	0.842	1
Amp_11q13.3	Del_10q23.31	0.842	1
ACTL6B	Del_21q11.2	0.843	1
AQP12A	TBX3	0.843	1
CDKN1B	17q-Del	0.843	1
CDKN1B	Amp_19q12	0.843	1
HIST1H2BC	TBX3	0.843	1
PTPN22	17q-Del	0.843	1
PTPN22	Del_21q11.2	0.843	1
TBL1XR1	14q-Del	0.843	1
TBX3	ICOSLG	0.843	1
TBX3	MLC1	0.843	1
TBX3	OR6C76	0.843	1
TBX3	CABYR	0.843	1
TBX3	CCDC82	0.843	1
TBX3	CXCR3	0.843	1
TBX3	TCP11	0.843	1
AKD1	KCNN3	0.843	1
ANKRD12	Del_2q37.3	0.843	1
ERBB3	Del_2q37.3	0.843	1
ANGPT4	17q-Del	0.843	1
ATHL1	17q-Del	0.843	1
ATHL1	Amp_19q12	0.843	1
ATHL1	Del_21q11.2	0.843	1
Amp_8q24.21	Del_7q36.1	0.843	1
C1QTNF5	CBFB	0.844	1
C1QTNF5	FOXA1	0.844	1
C1QTNF5	Del_22q13.32	0.844	1
CBFB	PTHLH	0.844	1
CBFB	SMAD2	0.844	1
CBFB	ZFP36L2	0.844	1
CBFB	ATXN7L1	0.844	1
CBFB	ANKRD20A4	0.844	1
EPDR1	MAP2K4	0.844	1
ERBB2	11q-Del	0.844	1
FAM20C	Amp_10q22.3	0.844	1
FOXA1	PTHLH	0.844	1
FOXA1	SMAD2	0.844	1
FOXA1	ZFP36L2	0.844	1
FOXA1	OR4D10	0.844	1
FOXA1	TFE3	0.844	1
GATA3	ATXN2	0.844	1
GATA3	RBMX	0.844	1
GATA3	Del_8p23.2	0.844	1
HLA-DRB5	Amp_10q22.3	0.844	1
MAP2K4	DLX6	0.844	1
MAP2K4	FBXO17	0.844	1
MAP2K4	FXYD5	0.844	1
MAP2K4	SHISA4	0.844	1
MAP2K4	AKT2	0.844	1
MAP2K4	CDC42EP1	0.844	1
MAP2K4	MKL1	0.844	1
MAP2K4	NBPF9	0.844	1
PTHLH	Amp_10p15.1	0.844	1
PTHLH	Del_22q13.32	0.844	1
RAB42	Amp_10q22.3	0.844	1
SMAD4	Del_22q13.32	0.844	1
ZFP36L2	Amp_10p15.1	0.844	1
ATXN2	9p-Del	0.844	1
CCNL2	Amp_10p15.1	0.844	1
OR2T35	Amp_10q22.3	0.844	1
SPRR2B	Amp_13q34	0.844	1
XBP1	Amp_10q22.3	0.844	1
FRMPD2	5q-Del	0.844	1
OXCT2	Amp_10q22.3	0.844	1
PAX2	Amp_10q22.3	0.844	1
RHBG	Amp_10q22.3	0.844	1
RIBC1	Amp_10q22.3	0.844	1
SDC1	Amp_13q34	0.844	1
SPEN	18q-Del	0.844	1
SPEN	Amp_12q15	0.844	1
TFE3	Amp_10p15.1	0.844	1
TTPAL	Amp_10q22.3	0.844	1
ZBTB7C	Amp_10q22.3	0.844	1
ZNF362	Amp_10q22.3	0.844	1
20q-Amp	Del_4p16.3	0.844	1
20q-Amp	Del_5q11.2	0.844	1
16q-Del	9q-Del	0.844	1
1p-Del	Amp_3q26.32	0.844	1
Amp_11q13.3	Del_12q23.1	0.844	1
Amp_11q14.1	Del_5q11.2	0.844	1
ACTL6B	APC	0.845	1
ACTL6B	SF3B1	0.845	1
ACTL6B	MYH9	0.845	1
ACTL6B	WDR52	0.845	1
ACTL6B	KDM6A	0.845	1
APC	CDKN1B	0.845	1
APC	TBL1XR1	0.845	1
APC	1q-Del	0.845	1
ASB10	DOCK11	0.845	1
CDKN1B	SF3B1	0.845	1
CDKN1B	DNAH12	0.845	1
CDKN1B	MYH9	0.845	1
CDKN1B	WDR52	0.845	1
CTCF	Amp_10q22.3	0.845	1
EPDR1	1q-Amp	0.845	1
ERBB2	FAM86B1	0.845	1
ERBB2	TCP10	0.845	1
ERBB2	GYG2	0.845	1
ERBB2	MORN1	0.845	1
ERBB2	C15orf39	0.845	1
ERBB2	SLC35B2	0.845	1
ERBB2	USP36	0.845	1
PTPN22	DNAH12	0.845	1
RB1	Del_9q21.11	0.845	1
SF3B1	TBL1XR1	0.845	1
SF3B1	ANGPT4	0.845	1
SF3B1	1q-Del	0.845	1
TBL1XR1	DNAH12	0.845	1
TBL1XR1	WDR52	0.845	1
TBL1XR1	KDM6A	0.845	1
TCP10	DOCK11	0.845	1
TP53	ANGPT4	0.845	1
TP53	ATHL1	0.845	1
ANKRD12	Amp_10q22.3	0.845	1
DLX6	1q-Amp	0.845	1
DNAH12	PRICKLE3	0.845	1
DNAH12	ANGPT4	0.845	1
DNAH12	1q-Del	0.845	1
DST	DOCK11	0.845	1
DST	17q-Amp	0.845	1
DST	Amp_4q13.3	0.845	1
ERBB3	Amp_10q22.3	0.845	1
GRHL2	DOCK11	0.845	1
GYG2	DOCK11	0.845	1
HLA-C	Del_6q27	0.845	1
HRNR	Del_11p15.5	0.845	1
ICOSLG	8q-Amp	0.845	1
MYH9	ANGPT4	0.845	1
MYH9	1q-Del	0.845	1
NFE2L3	Del_6q27	0.845	1
PRICKLE3	WDR52	0.845	1
WDR52	1q-Del	0.845	1
CCDC82	8q-Amp	0.845	1
CEP57	8q-Amp	0.845	1
DOCK11	PSIP1	0.845	1
DOCK11	USP36	0.845	1
KDM6A	1q-Del	0.845	1
NF1	1p-Del	0.845	1
NF1	Amp_14q21.1	0.845	1
TCP11	8q-Amp	0.845	1
AQP12A	Del_14q24.1	0.846	1
CDH1	WSCD2	0.846	1
CDH1	DLG1	0.846	1
HIST1H2BC	Del_11p15.5	0.846	1
PIK3CA	ANKRD12	0.846	1
PIK3CA	ERBB3	0.846	1
TP53	9p-Del	0.846	1
WSCD2	Del_1p22.1	0.846	1
MLC1	Del_14q24.1	0.846	1
ZNF41	Del_9p23	0.846	1
CABYR	Del_11p15.5	0.846	1
CASZ1	Del_1p22.1	0.846	1
CCDC82	Del_11p15.5	0.846	1
CEP57	Del_14q24.1	0.846	1
DLG1	Del_1p22.1	0.846	1
TARBP2	Del_11p15.5	0.846	1
TFE3	Amp_8p11.21	0.846	1
20p-Amp	Del_17q21.31	0.846	1
7q-Amp	Amp_3p25.1	0.846	1
7q-Amp	Del_7p22.3	0.846	1
Amp_1p22.3	Del_4q35.1	0.846	1
Amp_3p25.1	Del_19p13.3	0.846	1
ACTL6B	Del_7q36.1	0.847	1
ARID1A	16p-Amp	0.847	1
ARID1A	11p-Del	0.847	1
ASB10	16q-Del	0.847	1
FAM20C	NCOR1	0.847	1
FAM20C	17q-Amp	0.847	1
HLA-DRB5	17q-Amp	0.847	1
HLA-DRB5	Amp_4q13.3	0.847	1
MLL3	Del_18q23	0.847	1
NCOR1	RAB42	0.847	1
NCOR1	CCL13	0.847	1
NCOR1	OR2T35	0.847	1
NCOR1	XBP1	0.847	1
NCOR1	OXCT2	0.847	1
NCOR1	PAX2	0.847	1
NCOR1	RHBG	0.847	1
NCOR1	TTPAL	0.847	1
NCOR1	ZBTB7C	0.847	1
NCOR1	ZNF362	0.847	1
PIK3R1	7p-Amp	0.847	1
RAB42	17q-Amp	0.847	1
RAB42	Amp_4q13.3	0.847	1
TBL1XR1	Del_7q36.1	0.847	1
ANKRD12	11p-Del	0.847	1
CCL13	17q-Amp	0.847	1
CCL13	Amp_4q13.3	0.847	1
GRHL2	16q-Del	0.847	1
OR2T35	17q-Amp	0.847	1
XBP1	Amp_4q13.3	0.847	1
ANGPT4	Del_7q36.1	0.847	1
MED23	4p-Del	0.847	1
MUC6	4p-Del	0.847	1
OXCT2	17q-Amp	0.847	1
OXCT2	Amp_4q13.3	0.847	1
PAX2	17q-Amp	0.847	1
PAX2	Amp_4q13.3	0.847	1
PCNXL2	Del_10q23.31	0.847	1
RHBG	Amp_4q13.3	0.847	1
RIBC1	17q-Amp	0.847	1
TNRC6B	Del_9q34.2	0.847	1
TTPAL	17q-Amp	0.847	1
USP36	16q-Del	0.847	1
ZBTB7C	17q-Amp	0.847	1
ZBTB7C	Amp_4q13.3	0.847	1
ZNF362	17q-Amp	0.847	1
ZNF362	Amp_4q13.3	0.847	1
13q-Del	Amp_1q44	0.847	1
Amp_19p13.12	Del_1p22.1	0.847	1
AQP12A	ARID1A	0.848	1
AQP12A	NF1	0.848	1
ARID1A	HIST1H2BC	0.848	1
ARID1A	KRAS	0.848	1
ARID1A	ICOSLG	0.848	1
ARID1A	MLC1	0.848	1
ARID1A	OR6C76	0.848	1
ARID1A	CABYR	0.848	1
ARID1A	CEP57	0.848	1
ARID1A	TARBP2	0.848	1
ARID1A	16q-Del	0.848	1
ASB10	Amp_6p23	0.848	1
GATA3	7p-Amp	0.848	1
HIST1H2BC	NF1	0.848	1
DNAH12	Amp_19p13.12	0.848	1
ICOSLG	NF1	0.848	1
MORN1	Amp_6p23	0.848	1
MYH9	Amp_19p13.12	0.848	1
CABYR	NF1	0.848	1
CCDC82	NF1	0.848	1
CEP57	NF1	0.848	1
CXCR3	NF1	0.848	1
DLG1	1q-Amp	0.848	1
NF1	TARBP2	0.848	1
USP36	Amp_6p23	0.848	1
5p-Amp	8p-Amp	0.848	1
7p-Amp	9p-Del	0.848	1
Amp_12p13.33	Del_12p13.1	0.848	1
Del_2q37.3	Del_6p25.3	0.848	1
C1QTNF5	Del_10q23.31	0.849	1
CASP8	CASZ1	0.849	1
EPDR1	HRNR	0.849	1
FBXW7	20p-Amp	0.849	1
FOXA1	20p-Amp	0.849	1
GPS2	Amp_15q26.3	0.849	1
MYB	WSCD2	0.849	1
MYB	CASZ1	0.849	1
MYB	DLG1	0.849	1
MYB	MLL4	0.849	1
PTHLH	Del_10q23.31	0.849	1
RB1	16p-Amp	0.849	1
SMAD2	Del_10q23.31	0.849	1
WSCD2	FHOD3	0.849	1
WSCD2	UBC	0.849	1
WSCD2	FRMPD2	0.849	1
WSCD2	TGS1	0.849	1
WSCD2	13q-Del	0.849	1
ZFP36L2	Del_10q23.31	0.849	1
ABCA8	20p-Amp	0.849	1
ATXN7L1	Del_10q23.31	0.849	1
CCNL2	Del_10q23.31	0.849	1
DLX6	HRNR	0.849	1
FBXO17	HRNR	0.849	1
FHOD3	CASZ1	0.849	1
FHOD3	DLG1	0.849	1
FXYD5	HRNR	0.849	1
HRNR	SHISA4	0.849	1
HRNR	AKT2	0.849	1
HRNR	MKL1	0.849	1
OR4D10	Del_10q23.31	0.849	1
PPEF1	Amp_15q26.3	0.849	1
SPRR2B	1p-Del	0.849	1
DLG1	FRMPD2	0.849	1
SDC1	1p-Del	0.849	1
SDC1	Amp_14q21.1	0.849	1
TFE3	Del_10q23.31	0.849	1
17q-Del	Amp_14q21.1	0.849	1
22q-Del	Amp_12p13.33	0.849	1
Amp_6q21	Del_12q23.1	0.849	1
Amp_11p13	Del_12q23.1	0.849	1
Amp_11p13	Del_12q24.31	0.849	1
Amp_12q15	Del_6p25.3	0.849	1
Amp_19p13.12	Del_9p23	0.849	1
Del_5q21.3	Del_7q36.1	0.849	1
ACTL6B	MLL3	0.85	1
GPS2	ATXN2	0.85	1
GPS2	MED23	0.85	1
GPS2	RBMX	0.85	1
GPS2	ZMYM3	0.85	1
HIST1H3B	ATXN2	0.85	1
HIST1H3B	MED23	0.85	1
HIST1H3B	MUC6	0.85	1
HIST1H3B	ZMYM3	0.85	1
RB1	17q-Del	0.85	1
THEM5	ATXN2	0.85	1
THEM5	MED23	0.85	1
THEM5	RBMX	0.85	1
THEM5	ZMYM3	0.85	1
ZFP36L2	Amp_20q13.2	0.85	1
ATXN2	GPRIN2	0.85	1
ATXN2	FGFR2	0.85	1
ATXN7L1	Amp_20q13.2	0.85	1
CCNL2	Amp_20q13.2	0.85	1
COL6A5	22q-Del	0.85	1
GPRIN2	MED23	0.85	1
GPRIN2	RBMX	0.85	1
GPRIN2	ZMYM3	0.85	1
PPEF1	MED23	0.85	1
PPEF1	RBMX	0.85	1
PPEF1	ZMYM3	0.85	1
ZNF41	MED23	0.85	1
ZNF41	MUC6	0.85	1
ANGPT4	Del_17p12	0.85	1
FGFR2	MED23	0.85	1
FGFR2	MUC6	0.85	1
IRS4	MED23	0.85	1
IRS4	MUC6	0.85	1
MR1	Amp_20q13.2	0.85	1
MUC6	ZNF687	0.85	1
RBMX	ZNF687	0.85	1
1p-Del	Amp_1p22.3	0.85	1
Amp_10p15.1	Amp_12q15	0.85	1
Amp_14q21.1	Del_11q23.3	0.85	1
AARS	CTCF	0.851	1
AARS	TAF1L	0.851	1
AARS	8q-Amp	0.851	1
ARID1A	Amp_8q24.21	0.851	1
CTCF	VCPIP1	0.851	1
CTCF	ZFP36L1	0.851	1
CTCF	HLA-C	0.851	1
CTCF	NFE2L3	0.851	1
CTCF	EIF4A2	0.851	1
CTCF	KCNN3	0.851	1
GATA3	ZFP36L2	0.851	1
GATA3	ATXN7L1	0.851	1
GATA3	OR4D10	0.851	1
GATA3	TFE3	0.851	1
NCOR1	RPGR	0.851	1
NCOR1	ANKRD12	0.851	1
PIWIL1	HLA-C	0.851	1
PIWIL1	KCNN3	0.851	1
PTEN	RB1	0.851	1
PTHLH	9p-Del	0.851	1
RB1	8q-Amp	0.851	1
RPGR	VCPIP1	0.851	1
RPGR	ZFP36L1	0.851	1
RPGR	HLA-C	0.851	1
RPGR	KCNN3	0.851	1
RPGR	17q-Amp	0.851	1
RPGR	Amp_4q13.3	0.851	1
SMAD2	Del_10q26.3	0.851	1
SMAD4	Del_10q26.3	0.851	1
TAF1L	ZFP36L1	0.851	1
TAF1L	HLA-C	0.851	1
TAF1L	NFE2L3	0.851	1
TAF1L	EIF4A2	0.851	1
TAF1L	KCNN3	0.851	1
TAF1L	17q-Amp	0.851	1
TAF1L	Amp_4q13.3	0.851	1
ZFP36L1	ANKRD12	0.851	1
ZFP36L1	ERBB3	0.851	1
ZFP36L1	TNRC6B	0.851	1
ZFP36L2	9p-Del	0.851	1
ANKRD12	HLA-C	0.851	1
ANKRD12	NFE2L3	0.851	1
ANKRD12	EIF4A2	0.851	1
ANKRD12	KCNN3	0.851	1
ANKRD12	Amp_4q13.3	0.851	1
ATXN7L1	9p-Del	0.851	1
CCNL2	9p-Del	0.851	1
COL6A5	Del_11p15.5	0.851	1
COL6A5	Del_14q24.1	0.851	1
ERBB3	HLA-C	0.851	1
ERBB3	KCNN3	0.851	1
ERBB3	17q-Amp	0.851	1
FHOD3	Del_4q35.1	0.851	1
NFE2L3	TNRC6B	0.851	1
OR4D10	9p-Del	0.851	1
OR4D10	Del_10q26.3	0.851	1
ANKRD20A4	9p-Del	0.851	1
EIF4A2	TNRC6B	0.851	1
FRMPD2	Del_4q35.1	0.851	1
FRMPD2	Del_15q13.1	0.851	1
KCNN3	TNRC6B	0.851	1
MR1	Del_10q26.3	0.851	1
PCNXL2	9p-Del	0.851	1
TFE3	9p-Del	0.851	1
TFE3	Del_10q26.3	0.851	1
TGS1	Del_4q35.1	0.851	1
11p-Del	Amp_19q13.42	0.851	1
6q-Del	Amp_11q13.3	0.851	1
9p-Del	Amp_12p13.33	0.851	1
Amp_10q22.3	Del_12q24.31	0.851	1
ARID1A	Del_12q24.31	0.852	1
C1QTNF5	8p-Del	0.852	1
FAM86B1	RB1	0.852	1
PIWIL1	Amp_17q12	0.852	1
RB1	TCP10	0.852	1
RB1	GRHL2	0.852	1
RB1	GYG2	0.852	1
RB1	MORN1	0.852	1
RB1	USP36	0.852	1
WSCD2	1p-Del	0.852	1
ZFP36L2	8p-Del	0.852	1
ATXN7L1	8p-Del	0.852	1
ERBB3	Amp_17q12	0.852	1
SPRR2B	Del_12q23.1	0.852	1
SPRR2B	Del_12q24.31	0.852	1
DLG1	Amp_3q26.32	0.852	1
MLL4	Amp_14q21.1	0.852	1
SDC1	Del_12q23.1	0.852	1
SDC1	Del_12q24.31	0.852	1
18q-Del	8p-Del	0.852	1
Del_9q21.11	Del_12q23.1	0.852	1
CDH1	Amp_11q14.1	0.853	1
EPDR1	SPEN	0.853	1
EPDR1	7q-Amp	0.853	1
MAP3K1	8q-Amp	0.853	1
MYB	Amp_11p13	0.853	1
PIK3R1	Amp_3p25.1	0.853	1
PTEN	Del_9q34.2	0.853	1
DLX6	SPEN	0.853	1
DLX6	7q-Amp	0.853	1
DST	17p-Del	0.853	1
FBXO17	7q-Amp	0.853	1
FHOD3	5p-Amp	0.853	1
FHOD3	Amp_6q21	0.853	1
FXYD5	7q-Amp	0.853	1
SHISA4	7q-Amp	0.853	1
UBC	Amp_6q21	0.853	1
UBC	Amp_11p13	0.853	1
AKT2	7q-Amp	0.853	1
BCORL1	Del_5q21.3	0.853	1
BCORL1	Del_7p22.3	0.853	1
CDC42EP1	7q-Amp	0.853	1
DOCK11	9q-Del	0.853	1
DOCK11	Del_20p13	0.853	1
MKL1	7q-Amp	0.853	1
NBPF9	SPEN	0.853	1
NBPF9	7q-Amp	0.853	1
TGS1	Amp_6q21	0.853	1
16p-Amp	18p-Del	0.853	1
17q-Amp	Del_9q21.11	0.853	1
8q-Amp	Amp_6q21	0.853	1
5q-Del	Del_6p25.3	0.853	1
Amp_1q21.3	Amp_10q22.3	0.853	1
ACTL6B	FBXW7	0.854	1
ACTL6B	PIK3R1	0.854	1
ACTL6B	ABCA8	0.854	1
ACTL6B	BCORL1	0.854	1
CDKN1B	FBXW7	0.854	1
CDKN1B	PIK3R1	0.854	1
CDKN1B	ABCA8	0.854	1
CDKN1B	BCORL1	0.854	1
FBXW7	PTPN22	0.854	1
FBXW7	TBL1XR1	0.854	1
FBXW7	PRICKLE3	0.854	1
FBXW7	1q-Del	0.854	1
PIK3R1	PRICKLE3	0.854	1
PIK3R1	ANGPT4	0.854	1
PIK3R1	1q-Del	0.854	1
PTHLH	4p-Del	0.854	1
SMAD2	4p-Del	0.854	1
SMAD4	4p-Del	0.854	1
TBL1XR1	ABCA8	0.854	1
TBL1XR1	BCORL1	0.854	1
TP53	9q-Del	0.854	1
ABCA8	PRICKLE3	0.854	1
ABCA8	ANGPT4	0.854	1
ABCA8	1q-Del	0.854	1
ATXN7L1	4p-Del	0.854	1
CCNL2	4p-Del	0.854	1
COL6A5	Del_1p36.13	0.854	1
NFE2L3	Del_1p36.13	0.854	1
ANGPT4	BCORL1	0.854	1
ANKRD20A4	4p-Del	0.854	1
ATHL1	BCORL1	0.854	1
BCORL1	1q-Del	0.854	1
KDM6A	Del_18q23	0.854	1
MR1	4p-Del	0.854	1
RBMX	8p-Amp	0.854	1
SDC1	8q-Amp	0.854	1
TFE3	4p-Del	0.854	1
7p-Amp	4p-Del	0.854	1
Amp_19q12	Del_10q23.31	0.854	1
Del_1p22.1	Del_20p13	0.854	1
HLA-DRB5	Del_16q24.3	0.855	1
SF3B1	Del_8p23.2	0.855	1
HLA-C	Del_12p13.1	0.855	1
MYH9	Del_8p23.2	0.855	1
NFE2L3	Del_12p13.1	0.855	1
OR2T35	Del_16q24.3	0.855	1
DLG1	Amp_1p22.3	0.855	1
MLL4	Amp_1p22.3	0.855	1
MLL4	Amp_8p11.23	0.855	1
PAX2	Del_16q24.3	0.855	1
ZBTB7C	Del_16q24.3	0.855	1
14q-Del	Amp_6p23	0.855	1
16p-Del	Amp_11p13	0.855	1
5q-Del	Del_1p22.1	0.855	1
Amp_3p25.1	Del_10q23.31	0.855	1
Amp_6p23	Del_21q11.2	0.855	1
Del_6q27	Del_12q23.1	0.855	1
C1QTNF5	PCNXL2	0.856	1
C1QTNF5	18p-Del	0.856	1
KRAS	17p-Del	0.856	1
MAP2K4	Amp_6p23	0.856	1
ZFP36L2	PCNXL2	0.856	1
ICOSLG	17p-Del	0.856	1
ANKRD20A4	PCNXL2	0.856	1
CABYR	17p-Del	0.856	1
CXCR3	17p-Del	0.856	1
MR1	18p-Del	0.856	1
TARBP2	17p-Del	0.856	1
1q-Del	Amp_11q13.3	0.856	1
Amp_15q26.3	Del_6q27	0.856	1
APC	Del_17q21.31	0.857	1
AQP12A	Del_4q35.1	0.857	1
HIST1H2BC	Del_15q13.1	0.857	1
PTEN	Del_9p23	0.857	1
SF3B1	Del_17q21.31	0.857	1
WSCD2	Del_12q24.31	0.857	1
AKD1	Del_22q13.32	0.857	1
ICOSLG	Del_4q35.1	0.857	1
ICOSLG	Del_15q13.1	0.857	1
MLC1	Del_4q35.1	0.857	1
MLC1	Del_15q13.1	0.857	1
WDR52	Del_17q21.31	0.857	1
CASZ1	Del_12q23.1	0.857	1
CASZ1	Del_12q24.31	0.857	1
CCDC82	Del_15q13.1	0.857	1
CEP57	Del_15q13.1	0.857	1
CXCR3	Del_4q35.1	0.857	1
DLG1	Del_12q23.1	0.857	1
MLL4	Del_12q23.1	0.857	1
TARBP2	Del_4q35.1	0.857	1
TCP11	Del_15q13.1	0.857	1
16q-Del	4q-Del	0.857	1
18q-Del	Amp_1q44	0.857	1
Del_2q37.3	Del_8p23.2	0.857	1
CBFB	RUNX1	0.858	1
FAM20C	16p-Del	0.858	1
HLA-DRB5	16p-Del	0.858	1
PTPN22	9q-Del	0.858	1
RAB42	16p-Del	0.858	1
TBL1XR1	Del_20p13	0.858	1
AKD1	4q-Del	0.858	1
CCL13	16p-Del	0.858	1
OR2T35	16p-Del	0.858	1
PRICKLE3	9q-Del	0.858	1
XBP1	16p-Del	0.858	1
ANGPT4	Del_20p13	0.858	1
ATHL1	9q-Del	0.858	1
OXCT2	16p-Del	0.858	1
PAX2	16p-Del	0.858	1
TTPAL	16p-Del	0.858	1
ZBTB7C	16p-Del	0.858	1
ZNF362	16p-Del	0.858	1
20p-Amp	Del_5q11.2	0.858	1
16p-Del	Del_6p25.3	0.858	1
AARS	DNAH12	0.859	1
APC	ZFP36L1	0.859	1
APC	KCNN3	0.859	1
AQP12A	COL6A5	0.859	1
ASB10	AKD1	0.859	1
C1QTNF5	8p-Amp	0.859	1
CASP8	MYB	0.859	1
CASP8	FHOD3	0.859	1
CASP8	TGS1	0.859	1
FAM86B1	AKD1	0.859	1
FAM86B1	Amp_17q12	0.859	1
HIST1H2BC	COL6A5	0.859	1
MYB	FHOD3	0.859	1
MYB	UBC	0.859	1
MYB	FRMPD2	0.859	1
MYB	TGS1	0.859	1
PTHLH	18q-Del	0.859	1
SF3B1	VCPIP1	0.859	1
SF3B1	ZFP36L1	0.859	1
SF3B1	HLA-C	0.859	1
SF3B1	KCNN3	0.859	1
TCP10	AKD1	0.859	1
TCP10	Amp_17q12	0.859	1
VCPIP1	MYH9	0.859	1
VCPIP1	WDR52	0.859	1
ZFP36L1	DNAH12	0.859	1
ZFP36L1	MYH9	0.859	1
ZFP36L1	WDR52	0.859	1
AKD1	GRHL2	0.859	1
AKD1	MORN1	0.859	1
AKD1	SLC35B2	0.859	1
AKD1	USP36	0.859	1
ATXN2	Del_19q13.32	0.859	1
CCNL2	18q-Del	0.859	1
COL6A5	ICOSLG	0.859	1
COL6A5	CABYR	0.859	1
COL6A5	CCDC82	0.859	1
COL6A5	CEP57	0.859	1
COL6A5	CXCR3	0.859	1
COL6A5	TARBP2	0.859	1
COL6A5	TCP11	0.859	1
DNAH12	NFE2L3	0.859	1
DNAH12	EIF4A2	0.859	1
DNAH12	KCNN3	0.859	1
FHOD3	UBC	0.859	1
GYG2	Amp_17q12	0.859	1
HLA-C	WDR52	0.859	1
HLA-C	KDM6A	0.859	1
MORN1	Amp_17q12	0.859	1
MYH9	KCNN3	0.859	1
UBC	FRMPD2	0.859	1
WDR52	KCNN3	0.859	1
ANKRD20A4	18q-Del	0.859	1
FRMPD2	TGS1	0.859	1
KCNN3	KDM6A	0.859	1
MLL4	Amp_10p15.1	0.859	1
MR1	18q-Del	0.859	1
MUC6	Del_9p21.3	0.859	1
PCNXL2	18p-Del	0.859	1
PSIP1	Amp_17q12	0.859	1
RBMX	Del_3p21.31	0.859	1
SLC35B2	Amp_17q12	0.859	1
TPP2	Amp_17q12	0.859	1
ZMYM3	Del_19q13.32	0.859	1
17q-Amp	Del_21q11.2	0.859	1
8q-Amp	1p-Del	0.859	1
9q-Del	Amp_13q34	0.859	1
Amp_1q21.3	Del_6q27	0.859	1
Amp_12q15	Del_15q13.1	0.859	1
GPS2	DLG1	0.86	1
GPS2	MLL4	0.86	1
HIST1H3B	WSCD2	0.86	1
HIST1H3B	CASZ1	0.86	1
HIST1H3B	DLG1	0.86	1
HIST1H3B	Del_19p13.3	0.86	1
RB1	Del_4p16.3	0.86	1
THEM5	CASZ1	0.86	1
THEM5	DLG1	0.86	1
WSCD2	GPRIN2	0.86	1
WSCD2	PPEF1	0.86	1
WSCD2	ZNF41	0.86	1
WSCD2	FGFR2	0.86	1
WSCD2	IRS4	0.86	1
WSCD2	ZNF687	0.86	1
AKD1	Del_4q35.1	0.86	1
AKD1	Del_15q13.1	0.86	1
DST	Del_17q21.31	0.86	1
ERBB3	Del_6p25.3	0.86	1
GPRIN2	MLL4	0.86	1
GPRIN2	Del_19p13.3	0.86	1
ICOSLG	Del_13q14.2	0.86	1
ZNF41	MLL4	0.86	1
CASZ1	IRS4	0.86	1
CASZ1	ZNF687	0.86	1
CEP57	Del_13q14.2	0.86	1
DLG1	FGFR2	0.86	1
DLG1	ZNF687	0.86	1
IRS4	MLL4	0.86	1
RHOA	Del_13q14.2	0.86	1
TARBP2	Del_13q14.2	0.86	1
20q-Amp	Amp_6q21	0.86	1
7p-Amp	Amp_11q13.3	0.86	1
11p-Del	Amp_6p23	0.86	1
Amp_8p11.21	Amp_17q12	0.86	1
Amp_17q23.1	Del_9q21.11	0.86	1
FOXA1	Amp_19q13.42	0.861	1
NCOR1	Del_12q24.31	0.861	1
TBL1XR1	1q-Amp	0.861	1
AKD1	Del_17p12	0.861	1
FRMPD2	8q-Amp	0.861	1
PCNXL2	Amp_11q13.3	0.861	1
7q-Amp	Amp_19p13.12	0.861	1
8p-Amp	Del_17p12	0.861	1
Amp_4q13.3	Del_12q23.1	0.861	1
Amp_15q26.3	Del_21q11.2	0.861	1
Amp_19q12	Del_10q26.3	0.861	1
CASP8	Amp_13q34	0.862	1
EPDR1	RUNX1	0.862	1
FAM20C	PTEN	0.862	1
HIST1H3B	Del_8p23.2	0.862	1
HLA-DRB5	PTEN	0.862	1
NCOR1	Amp_1q44	0.862	1
PTEN	RAB42	0.862	1
PTEN	CCL13	0.862	1
PTEN	OR2T35	0.862	1
PTEN	XBP1	0.862	1
PTEN	RHBG	0.862	1
PTEN	TTPAL	0.862	1
PTEN	ZNF362	0.862	1
RUNX1	SHISA4	0.862	1
RUNX1	AKT2	0.862	1
RUNX1	NBPF9	0.862	1
ZFP36L2	6q-Del	0.862	1
FHOD3	Amp_13q34	0.862	1
HLA-C	4q-Del	0.862	1
UBC	Amp_13q34	0.862	1
CCDC82	Del_16q24.3	0.862	1
CEP57	Del_16q24.3	0.862	1
EIF4A2	4q-Del	0.862	1
MR1	6q-Del	0.862	1
SDC1	17p-Del	0.862	1
TFE3	6q-Del	0.862	1
ZNF687	Del_8p23.2	0.862	1
20p-Amp	18p-Del	0.862	1
20q-Amp	Del_9q34.2	0.862	1
7q-Amp	Amp_8q24.21	0.862	1
7q-Amp	Del_14q24.1	0.862	1
8q-Amp	Del_10q26.3	0.862	1
11p-Del	Amp_3p25.1	0.862	1
Amp_1p22.3	Del_12q24.31	0.862	1
Amp_3p25.1	Del_9q34.2	0.862	1
ACTL6B	ATXN2	0.863	1
ACTL6B	MED23	0.863	1
ACTL6B	RBMX	0.863	1
AQP12A	16p-Amp	0.863	1
C1QTNF5	DOCK11	0.863	1
CDKN1B	MED23	0.863	1
CDKN1B	MUC6	0.863	1
CDKN1B	ZMYM3	0.863	1
EPDR1	Del_11q23.3	0.863	1
ERBB2	SMAD4	0.863	1
ERBB2	ZFP36L2	0.863	1
ERBB2	CCNL2	0.863	1
ERBB2	ANKRD20A4	0.863	1
FAM20C	Amp_17q12	0.863	1
GPS2	22q-Del	0.863	1
PTHLH	DOCK11	0.863	1
PTPN22	MED23	0.863	1
PTPN22	RBMX	0.863	1
PTPN22	ZMYM3	0.863	1
RB1	Del_1p22.1	0.863	1
SMAD4	DOCK11	0.863	1
TBL1XR1	ATXN2	0.863	1
TBL1XR1	MED23	0.863	1
TBL1XR1	MUC6	0.863	1
TBL1XR1	RBMX	0.863	1
TBL1XR1	ZMYM3	0.863	1
ZFP36L1	Del_9p21.3	0.863	1
ZFP36L2	DOCK11	0.863	1
ATXN2	ANGPT4	0.863	1
ATXN2	1q-Del	0.863	1
ATXN7L1	DOCK11	0.863	1
CCNL2	DOCK11	0.863	1
DST	Del_13q14.2	0.863	1
DST	Del_22q13.32	0.863	1
FHOD3	20q-Amp	0.863	1
OR6C76	16p-Amp	0.863	1
PRICKLE3	MED23	0.863	1
PRICKLE3	RBMX	0.863	1
SPRR2B	Del_19q13.32	0.863	1
WDR52	Del_2q37.3	0.863	1
AKT2	Del_11q23.3	0.863	1
ANGPT4	MED23	0.863	1
ANGPT4	MUC6	0.863	1
ANGPT4	RBMX	0.863	1
ANGPT4	ZMYM3	0.863	1
ANKRD20A4	DOCK11	0.863	1
ATHL1	MED23	0.863	1
ATHL1	RBMX	0.863	1
ATHL1	ZMYM3	0.863	1
CABYR	16p-Amp	0.863	1
CEP57	16p-Amp	0.863	1
CXCR3	16p-Amp	0.863	1
FRMPD2	20q-Amp	0.863	1
KDM6A	Del_2q37.3	0.863	1
MED23	1q-Del	0.863	1
OXCT2	Amp_17q12	0.863	1
PAX2	Amp_17q12	0.863	1
PCNXL2	7q-Amp	0.863	1
PCNXL2	18q-Del	0.863	1
TGS1	20q-Amp	0.863	1
ZMYM3	1q-Del	0.863	1
ZNF362	Amp_17q12	0.863	1
Amp_8p11.21	Del_12p13.1	0.863	1
ARID1A	CDH1	0.864	1
FBXW7	TP53	0.864	1
FBXW7	Amp_19p13.12	0.864	1
PIK3R1	Amp_19p13.12	0.864	1
BCORL1	22q-Del	0.864	1
MUC6	Amp_8p11.21	0.864	1
RBMX	7p-Amp	0.864	1
RBMX	Amp_8p11.21	0.864	1
ZMYM3	7p-Amp	0.864	1
18p-Del	Amp_13q34	0.864	1
Amp_1p22.3	Amp_19p13.12	0.864	1
Amp_1p22.3	Del_6q27	0.864	1
Amp_6p23	Del_10q23.31	0.864	1
AARS	MAP3K1	0.865	1
AQP12A	CBFB	0.865	1
AQP12A	FOXA1	0.865	1
CBFB	HIST1H2BC	0.865	1
CBFB	KRAS	0.865	1
CBFB	ICOSLG	0.865	1
CBFB	MLC1	0.865	1
CBFB	OR6C76	0.865	1
CBFB	CABYR	0.865	1
CBFB	CCDC82	0.865	1
CBFB	RHOA	0.865	1
CBFB	TARBP2	0.865	1
CBFB	TCP11	0.865	1
FOXA1	HIST1H2BC	0.865	1
FOXA1	KRAS	0.865	1
FOXA1	CABYR	0.865	1
FOXA1	CEP57	0.865	1
FOXA1	CXCR3	0.865	1
FOXA1	RHOA	0.865	1
FOXA1	TARBP2	0.865	1
FOXA1	TCP11	0.865	1
HIST1H3B	5q-Del	0.865	1
MAP3K1	KCNN3	0.865	1
TCP10	Del_2q37.3	0.865	1
THEM5	5q-Del	0.865	1
VCPIP1	Del_9q21.11	0.865	1
GRHL2	Del_2q37.3	0.865	1
NFE2L3	Amp_12p13.33	0.865	1
C15orf39	Del_2q37.3	0.865	1
CASZ1	Del_10q23.31	0.865	1
EIF4A2	Amp_12p13.33	0.865	1
FGFR2	5q-Del	0.865	1
IRS4	5q-Del	0.865	1
KCNN3	Del_9q21.11	0.865	1
TNRC6B	Del_11p15.5	0.865	1
TNRC6B	Del_14q24.1	0.865	1
8q-Amp	Del_11p15.5	0.865	1
15q-Del	8p-Del	0.865	1
Amp_12q15	Del_12p13.1	0.865	1
Del_7q36.1	Del_12p13.1	0.865	1
FOXA1	TBX3	0.866	1
PTEN	Amp_6q21	0.866	1
RAB42	DST	0.866	1
CCL13	DST	0.866	1
DNAH12	17q-Amp	0.866	1
DNAH12	Amp_4q13.3	0.866	1
DST	OR2T35	0.866	1
DST	OXCT2	0.866	1
DST	PAX2	0.866	1
DST	ZBTB7C	0.866	1
ICOSLG	20q-Amp	0.866	1
ICOSLG	Amp_11q14.1	0.866	1
MLC1	Amp_11q14.1	0.866	1
MYH9	17q-Amp	0.866	1
SPRR2B	7p-Amp	0.866	1
WDR52	17q-Amp	0.866	1
WDR52	Del_9p23	0.866	1
WDR52	Del_9q34.2	0.866	1
ZNF41	Del_11p15.5	0.866	1
CABYR	20q-Amp	0.866	1
CCDC82	Amp_11q14.1	0.866	1
CEP57	Amp_11q14.1	0.866	1
CXCR3	20q-Amp	0.866	1
CXCR3	Amp_11q14.1	0.866	1
KDM6A	17q-Amp	0.866	1
SDC1	7p-Amp	0.866	1
TCP11	20q-Amp	0.866	1
ZNF687	Del_11p15.5	0.866	1
Amp_12q15	Del_22q13.32	0.866	1
Amp_19q13.42	Del_22q13.32	0.866	1
ASB10	CTCF	0.867	1
ASB10	PIWIL1	0.867	1
ASB10	RPGR	0.867	1
ASB10	TAF1L	0.867	1
ASB10	ANKRD12	0.867	1
ASB10	ERBB3	0.867	1
ASB10	TNRC6B	0.867	1
CTCF	FAM86B1	0.867	1
CTCF	TCP10	0.867	1
CTCF	GYG2	0.867	1
CTCF	MORN1	0.867	1
CTCF	PSIP1	0.867	1
CTCF	SLC35B2	0.867	1
CTCF	USP36	0.867	1
EPDR1	TBX3	0.867	1
FAM86B1	PIWIL1	0.867	1
FAM86B1	RPGR	0.867	1
FAM86B1	TAF1L	0.867	1
FAM86B1	ANKRD12	0.867	1
FAM86B1	ERBB3	0.867	1
FAM86B1	TNRC6B	0.867	1
GATA3	Del_11q23.3	0.867	1
PIK3CA	ZFP36L1	0.867	1
PIWIL1	TCP10	0.867	1
PIWIL1	C15orf39	0.867	1
PIWIL1	SLC35B2	0.867	1
PIWIL1	TPP2	0.867	1
PIWIL1	USP36	0.867	1
RPGR	TCP10	0.867	1
RPGR	GRHL2	0.867	1
RPGR	C15orf39	0.867	1
RPGR	USP36	0.867	1
TAF1L	TCP10	0.867	1
TAF1L	GRHL2	0.867	1
TAF1L	GYG2	0.867	1
TAF1L	C15orf39	0.867	1
TBX3	DLX6	0.867	1
TBX3	FBXO17	0.867	1
TBX3	FXYD5	0.867	1
TBX3	SHISA4	0.867	1
TBX3	AKT2	0.867	1
TBX3	MKL1	0.867	1
TBX3	NBPF9	0.867	1
TCP10	ANKRD12	0.867	1
TCP10	ERBB3	0.867	1
TCP10	TNRC6B	0.867	1
THEM5	Amp_17q23.1	0.867	1
ANKRD12	GRHL2	0.867	1
ANKRD12	GYG2	0.867	1
ANKRD12	C15orf39	0.867	1
ANKRD12	PSIP1	0.867	1
ANKRD12	SLC35B2	0.867	1
ANKRD12	USP36	0.867	1
ERBB3	GRHL2	0.867	1
ERBB3	C15orf39	0.867	1
ZNF41	Amp_17q23.1	0.867	1
AKT2	16q-Del	0.867	1
CDC42EP1	16q-Del	0.867	1
DLG1	Del_6q27	0.867	1
FGFR2	Amp_17q23.1	0.867	1
SLC35B2	TNRC6B	0.867	1
TNRC6B	TPP2	0.867	1
TNRC6B	USP36	0.867	1
14q-Del	Amp_20q13.2	0.867	1
15q-Del	Amp_3q26.32	0.867	1
Amp_6p23	Amp_10q22.3	0.867	1
Amp_11q13.3	Del_9q34.2	0.867	1
AARS	PIK3R1	0.868	1
AARS	Del_21q11.2	0.868	1
ASB10	Del_9q34.2	0.868	1
FAM86B1	11p-Del	0.868	1
FAM86B1	Del_9q34.2	0.868	1
FBXW7	VCPIP1	0.868	1
FBXW7	ZFP36L1	0.868	1
FBXW7	NFE2L3	0.868	1
FBXW7	EIF4A2	0.868	1
MAP2K4	22q-Del	0.868	1
PIK3R1	VCPIP1	0.868	1
PIK3R1	ZFP36L1	0.868	1
PIK3R1	NFE2L3	0.868	1
PIK3R1	EIF4A2	0.868	1
PIK3R1	KCNN3	0.868	1
RB1	17p-Del	0.868	1
RUNX1	Del_7p22.3	0.868	1
TAF1L	Del_12p13.1	0.868	1
VCPIP1	ABCA8	0.868	1
VCPIP1	17q-Del	0.868	1
ZFP36L1	ABCA8	0.868	1
ZFP36L1	BCORL1	0.868	1
ZFP36L1	17q-Del	0.868	1
ABCA8	HLA-C	0.868	1
ABCA8	KCNN3	0.868	1
ERBB3	Del_12p13.1	0.868	1
GRHL2	11p-Del	0.868	1
GRHL2	Del_9q34.2	0.868	1
GYG2	11p-Del	0.868	1
GYG2	Del_9q34.2	0.868	1
HLA-C	BCORL1	0.868	1
HLA-C	14q-Del	0.868	1
HLA-C	Del_21q11.2	0.868	1
NFE2L3	BCORL1	0.868	1
NFE2L3	Amp_19q12	0.868	1
ATHL1	Del_18q23	0.868	1
BCORL1	KCNN3	0.868	1
CASZ1	Del_10q26.3	0.868	1
EIF4A2	17q-Del	0.868	1
EIF4A2	Del_21q11.2	0.868	1
MLL4	9p-Del	0.868	1
MLL4	Del_10q26.3	0.868	1
RBMX	Amp_20q13.2	0.868	1
SLC35B2	Del_9q34.2	0.868	1
TPP2	11p-Del	0.868	1
TPP2	Del_9q34.2	0.868	1
USP36	11p-Del	0.868	1
USP36	Del_9q34.2	0.868	1
Amp_1q21.3	Amp_11q13.3	0.868	1
MAP3K1	Amp_8p11.23	0.869	1
MLL3	16q-Del	0.869	1
PTHLH	RB1	0.869	1
RB1	SMAD4	0.869	1
RB1	ATXN7L1	0.869	1
RB1	CCNL2	0.869	1
RB1	ANKRD20A4	0.869	1
RB1	TFE3	0.869	1
RB1	22q-Del	0.869	1
RB1	9q-Del	0.869	1
VCPIP1	Del_13q14.2	0.869	1
ABCA8	Amp_17q23.1	0.869	1
ATXN2	Amp_3p25.1	0.869	1
FHOD3	Del_5q11.2	0.869	1
HLA-C	Del_13q14.2	0.869	1
SPRR2B	Amp_3p25.1	0.869	1
SPRR2B	Del_7p22.3	0.869	1
CEP57	Amp_8p11.23	0.869	1
MED23	Amp_3p25.1	0.869	1
MUC6	Del_7p22.3	0.869	1
SDC1	Del_7p22.3	0.869	1
TARBP2	Amp_8p11.23	0.869	1
8q-Amp	17q-Del	0.869	1
Amp_10q22.3	Del_4p16.3	0.869	1
AQP12A	Del_4p16.3	0.87	1
CASP8	GPS2	0.87	1
CASP8	HIST1H3B	0.87	1
CASP8	THEM5	0.87	1
CASP8	GPRIN2	0.87	1
CASP8	PPEF1	0.87	1
CASP8	ZNF41	0.87	1
CASP8	IRS4	0.87	1
CTCF	16p-Del	0.87	1
ERBB2	9p-Del	0.87	1
GPS2	FHOD3	0.87	1
GPS2	TGS1	0.87	1
HIST1H3B	MYB	0.87	1
HIST1H3B	FHOD3	0.87	1
HIST1H3B	UBC	0.87	1
MYB	THEM5	0.87	1
MYB	GPRIN2	0.87	1
MYB	PPEF1	0.87	1
MYB	ZNF41	0.87	1
MYB	FGFR2	0.87	1
MYB	IRS4	0.87	1
MYB	ZNF687	0.87	1
RPGR	16p-Del	0.87	1
SMAD2	TP53	0.87	1
TAF1L	16p-Del	0.87	1
TBL1XR1	Del_17q21.31	0.87	1
THEM5	FHOD3	0.87	1
THEM5	UBC	0.87	1
THEM5	FRMPD2	0.87	1
THEM5	TGS1	0.87	1
TP53	TFE3	0.87	1
ANKRD12	16p-Del	0.87	1
ANKRD12	Del_16q24.3	0.87	1
DST	16p-Del	0.87	1
ERBB3	Del_16q24.3	0.87	1
FHOD3	PPEF1	0.87	1
FHOD3	ZNF687	0.87	1
GPRIN2	UBC	0.87	1
GPRIN2	TGS1	0.87	1
GRHL2	13q-Del	0.87	1
GYG2	13q-Del	0.87	1
MLC1	Del_4p16.3	0.87	1
MLC1	Del_5q11.2	0.87	1
PPEF1	FRMPD2	0.87	1
PRICKLE3	Del_17q21.31	0.87	1
SHISA4	Del_18q23	0.87	1
UBC	ZNF41	0.87	1
UBC	FGFR2	0.87	1
UBC	IRS4	0.87	1
UBC	1p-Del	0.87	1
UBC	Amp_14q21.1	0.87	1
AKT2	Del_18q23	0.87	1
CABYR	Del_5q11.2	0.87	1
CCDC82	Del_4p16.3	0.87	1
CCDC82	Del_5q11.2	0.87	1
CDC42EP1	Del_18q23	0.87	1
CEP57	Del_4p16.3	0.87	1
FGFR2	TGS1	0.87	1
FRMPD2	IRS4	0.87	1
IRS4	TGS1	0.87	1
NBPF9	Del_18q23	0.87	1
RHOA	Del_5q11.2	0.87	1
SLC35B2	13q-Del	0.87	1
TARBP2	Del_4p16.3	0.87	1
TGS1	ZNF687	0.87	1
TNRC6B	16p-Del	0.87	1
TNRC6B	Del_16q24.3	0.87	1
8p-Amp	Amp_11q14.1	0.87	1
8p-Amp	Amp_13q34	0.87	1
ASB10	Del_16q24.3	0.871	1
FAM86B1	Del_16q24.3	0.871	1
PTHLH	22q-Del	0.871	1
RUNX1	Amp_12q15	0.871	1
RUNX1	Del_7q36.1	0.871	1
SMAD4	22q-Del	0.871	1
ATXN2	20p-Amp	0.871	1
CCNL2	22q-Del	0.871	1
COL6A5	Del_4q35.1	0.871	1
COL6A5	Del_15q13.1	0.871	1
COL6A5	Del_16q24.3	0.871	1
DLX6	Del_17q21.31	0.871	1
FBXO17	Del_17q21.31	0.871	1
FXYD5	Del_17q21.31	0.871	1
CDC42EP1	Del_17q21.31	0.871	1
MKL1	Del_17q21.31	0.871	1
NBPF9	Del_17q21.31	0.871	1
TFE3	22q-Del	0.871	1
USP36	Del_16q24.3	0.871	1
1q-Amp	20p-Amp	0.871	1
8p-Amp	Del_2q37.3	0.871	1
Amp_12q15	Del_10q26.3	0.871	1
Amp_19q12	Del_3p21.31	0.871	1
ACTL6B	WSCD2	0.872	1
ACTL6B	CASZ1	0.872	1
ACTL6B	DLG1	0.872	1
ACTL6B	MLL4	0.872	1
AQP12A	Del_1p22.1	0.872	1
ARID1A	EPDR1	0.872	1
ARID1A	DLX6	0.872	1
ARID1A	NBPF9	0.872	1
ARID1A	Amp_3q26.32	0.872	1
C1QTNF5	20p-Amp	0.872	1
CASP8	CDH1	0.872	1
CDH1	KRAS	0.872	1
CDH1	UBC	0.872	1
CDH1	CCDC82	0.872	1
CDH1	FRMPD2	0.872	1
CDH1	TARBP2	0.872	1
CDH1	TCP11	0.872	1
CDKN1B	WSCD2	0.872	1
CDKN1B	CASZ1	0.872	1
CDKN1B	DLG1	0.872	1
EPDR1	NF1	0.872	1
FAM20C	13q-Del	0.872	1
GATA3	8p-Del	0.872	1
MLL3	NCOR1	0.872	1
PTPN22	Amp_15q26.3	0.872	1
RAB42	13q-Del	0.872	1
SMAD4	20p-Amp	0.872	1
TBL1XR1	WSCD2	0.872	1
TBL1XR1	CASZ1	0.872	1
VCPIP1	Amp_12q15	0.872	1
WSCD2	PRICKLE3	0.872	1
WSCD2	ANGPT4	0.872	1
WSCD2	ATHL1	0.872	1
WSCD2	1q-Del	0.872	1
ZFP36L1	Amp_12q15	0.872	1
ATXN7L1	20p-Amp	0.872	1
CCL13	13q-Del	0.872	1
CCNL2	20p-Amp	0.872	1
DLX6	NF1	0.872	1
FXYD5	NF1	0.872	1
ICOSLG	Del_1p22.1	0.872	1
NFE2L3	Amp_12q15	0.872	1
PRICKLE3	CASZ1	0.872	1
PRICKLE3	DLG1	0.872	1
SHISA4	NF1	0.872	1
AKT2	NF1	0.872	1
ANGPT4	CASZ1	0.872	1
ANGPT4	DLG1	0.872	1
ANGPT4	Amp_15q26.3	0.872	1
ATHL1	DLG1	0.872	1
ATHL1	Del_22q13.32	0.872	1
CASZ1	1q-Del	0.872	1
CDC42EP1	NF1	0.872	1
DLG1	1q-Del	0.872	1
MKL1	NF1	0.872	1
MLL4	1q-Del	0.872	1
PAX2	13q-Del	0.872	1
RHBG	13q-Del	0.872	1
RHOA	Del_1p22.1	0.872	1
SDC1	Amp_8p11.23	0.872	1
SPEN	Amp_1q44	0.872	1
ZNF362	13q-Del	0.872	1
16p-Amp	Amp_15q26.3	0.872	1
5p-Amp	Amp_15q26.3	0.872	1
5p-Amp	Amp_17q23.1	0.872	1
Amp_17q12	Del_6q15	0.872	1
Amp_17q23.1	Amp_19q13.42	0.872	1
FAM20C	MAP2K4	0.873	1
GPS2	Amp_6q21	0.873	1
HIST1H3B	Amp_11p13	0.873	1
MAP2K4	RAB42	0.873	1
MAP2K4	CCL13	0.873	1
MAP2K4	OR2T35	0.873	1
MAP2K4	XBP1	0.873	1
MAP2K4	OXCT2	0.873	1
MAP2K4	PAX2	0.873	1
MAP2K4	RHBG	0.873	1
MAP2K4	RIBC1	0.873	1
MAP2K4	TTPAL	0.873	1
MAP2K4	ZBTB7C	0.873	1
MAP3K1	8p-Amp	0.873	1
MAP3K1	Del_9q21.11	0.873	1
TBX3	Del_9q21.11	0.873	1
THEM5	5p-Amp	0.873	1
THEM5	Amp_19q13.42	0.873	1
COL6A5	Del_2q37.3	0.873	1
DST	Amp_10p15.1	0.873	1
PPEF1	Amp_6q21	0.873	1
FGFR2	Amp_6q21	0.873	1
IRS4	Amp_19q13.42	0.873	1
ZNF687	5p-Amp	0.873	1
ZNF687	Amp_11p13	0.873	1
20q-Amp	Amp_4q13.3	0.873	1
7q-Amp	8p-Del	0.873	1
18p-Del	Amp_8p11.23	0.873	1
Amp_8p11.23	Del_19q13.32	0.873	1
Amp_10q22.3	Amp_17q12	0.873	1
Amp_11q13.3	Del_20p13	0.873	1
Amp_20q13.2	Del_12p13.1	0.873	1
APC	ASB10	0.874	1
APC	FAM86B1	0.874	1
APC	TCP10	0.874	1
APC	SLC35B2	0.874	1
ARID1A	CBFB	0.874	1
ASB10	SF3B1	0.874	1
ASB10	DNAH12	0.874	1
ASB10	MYH9	0.874	1
ASB10	WDR52	0.874	1
ASB10	KDM6A	0.874	1
ASB10	Del_6q15	0.874	1
C1QTNF5	Amp_17q23.1	0.874	1
C1QTNF5	Del_17p12	0.874	1
CBFB	22q-Del	0.874	1
FAM86B1	SF3B1	0.874	1
FAM86B1	DNAH12	0.874	1
FAM86B1	MYH9	0.874	1
FAM86B1	WDR52	0.874	1
FAM86B1	KDM6A	0.874	1
PTHLH	Del_5q21.3	0.874	1
PTHLH	Del_17p12	0.874	1
RB1	Amp_17q23.1	0.874	1
RPGR	Del_6q15	0.874	1
SF3B1	TCP10	0.874	1
SF3B1	GRHL2	0.874	1
SF3B1	MORN1	0.874	1
SF3B1	C15orf39	0.874	1
SF3B1	SLC35B2	0.874	1
SF3B1	TPP2	0.874	1
SF3B1	USP36	0.874	1
SMAD2	Amp_17q23.1	0.874	1
SMAD4	Del_5q21.3	0.874	1
SMAD4	Del_17p12	0.874	1
TCP10	DNAH12	0.874	1
TCP10	MYH9	0.874	1
TCP10	WDR52	0.874	1
TCP10	KDM6A	0.874	1
ZFP36L2	Del_5q21.3	0.874	1
ZFP36L2	Del_17p12	0.874	1
ATXN7L1	Amp_17q23.1	0.874	1
CCNL2	Del_5q21.3	0.874	1
DNAH12	GYG2	0.874	1
DNAH12	MORN1	0.874	1
DNAH12	SLC35B2	0.874	1
DNAH12	USP36	0.874	1
GRHL2	MYH9	0.874	1
GRHL2	WDR52	0.874	1
GRHL2	KDM6A	0.874	1
GRHL2	Del_6q15	0.874	1
MORN1	WDR52	0.874	1
MYH9	SLC35B2	0.874	1
MYH9	TPP2	0.874	1
OR4D10	Del_17p12	0.874	1
WDR52	C15orf39	0.874	1
WDR52	USP36	0.874	1
ANKRD20A4	Del_17p12	0.874	1
ATHL1	Amp_8p11.21	0.874	1
C15orf39	KDM6A	0.874	1
C15orf39	Del_6q15	0.874	1
DOCK11	4p-Del	0.874	1
KDM6A	SLC35B2	0.874	1
KDM6A	TPP2	0.874	1
MR1	Amp_17q23.1	0.874	1
MR1	Del_17p12	0.874	1
TFE3	Amp_17q23.1	0.874	1
TFE3	Del_17p12	0.874	1
20q-Amp	14q-Del	0.874	1
5p-Amp	Amp_17q12	0.874	1
14q-Del	Amp_8q24.21	0.874	1
Amp_8p11.21	Amp_19p13.12	0.874	1
Amp_11p13	Amp_17q12	0.874	1
Amp_11q14.1	Amp_19q12	0.874	1
Amp_14q21.1	Del_10q26.3	0.874	1
FAM20C	Del_6q15	0.875	1
FOXA1	Del_1p36.13	0.875	1
MLL3	NFE2L3	0.875	1
WSCD2	Del_11q23.3	0.875	1
WSCD2	Del_19q13.32	0.875	1
CCL13	Del_6q15	0.875	1
OR2T35	Del_6q15	0.875	1
SPRR2B	Amp_19p13.12	0.875	1
UBC	17p-Del	0.875	1
UBC	Del_12q23.1	0.875	1
UBC	Del_12q24.31	0.875	1
ZNF41	Amp_8q24.21	0.875	1
FRMPD2	Del_12q23.1	0.875	1
MLL4	Amp_8q24.21	0.875	1
MLL4	Del_19q13.32	0.875	1
PAX2	Del_6q15	0.875	1
SDC1	Amp_19p13.12	0.875	1
ZNF687	Amp_8q24.21	0.875	1
16q-Del	Del_4q35.1	0.875	1
16q-Del	Del_15q13.1	0.875	1
18p-Del	Del_21q11.2	0.875	1
Amp_10p15.1	Del_6q27	0.875	1
Amp_10q22.3	Del_9p21.3	0.875	1
AARS	MED23	0.876	1
AARS	RBMX	0.876	1
AARS	ZMYM3	0.876	1
AQP12A	PCNXL2	0.876	1
AQP12A	Amp_3q26.32	0.876	1
C1QTNF5	AKD1	0.876	1
HIST1H2BC	PCNXL2	0.876	1
PIWIL1	4q-Del	0.876	1
PTEN	ERBB3	0.876	1
RB1	Del_13q14.2	0.876	1
TCP10	Del_6p25.3	0.876	1
VCPIP1	ATXN2	0.876	1
VCPIP1	MED23	0.876	1
VCPIP1	MUC6	0.876	1
VCPIP1	RBMX	0.876	1
VCPIP1	ZMYM3	0.876	1
ZFP36L1	MED23	0.876	1
ZFP36L1	MUC6	0.876	1
ZFP36L1	RBMX	0.876	1
ZFP36L1	ZMYM3	0.876	1
AKD1	ANKRD20A4	0.876	1
GYG2	Del_6p25.3	0.876	1
HLA-C	MED23	0.876	1
HLA-C	RBMX	0.876	1
HLA-C	ZMYM3	0.876	1
ICOSLG	PCNXL2	0.876	1
MLC1	PCNXL2	0.876	1
NFE2L3	MED23	0.876	1
NFE2L3	ZMYM3	0.876	1
OR6C76	PCNXL2	0.876	1
CABYR	PCNXL2	0.876	1
CCDC82	Amp_3q26.32	0.876	1
CEP57	PCNXL2	0.876	1
CEP57	Amp_3q26.32	0.876	1
CXCR3	PCNXL2	0.876	1
CXCR3	Amp_3q26.32	0.876	1
EIF4A2	MED23	0.876	1
EIF4A2	ZMYM3	0.876	1
KCNN3	MED23	0.876	1
KCNN3	MUC6	0.876	1
KCNN3	RBMX	0.876	1
KCNN3	ZMYM3	0.876	1
TCP11	Amp_3q26.32	0.876	1
EPDR1	Del_9p23	0.877	1
FAM20C	HRNR	0.877	1
FBXW7	Amp_8q24.21	0.877	1
GATA3	TBX3	0.877	1
RAB42	HRNR	0.877	1
WSCD2	18q-Del	0.877	1
CCL13	HRNR	0.877	1
COL6A5	Del_9q34.2	0.877	1
DLX6	Del_9p23	0.877	1
DNAH12	16q-Del	0.877	1
DST	8p-Del	0.877	1
FHOD3	Amp_3q26.32	0.877	1
HRNR	OR2T35	0.877	1
HRNR	XBP1	0.877	1
HRNR	PAX2	0.877	1
HRNR	RHBG	0.877	1
HRNR	TTPAL	0.877	1
HRNR	ZBTB7C	0.877	1
HRNR	ZNF362	0.877	1
PRICKLE3	Amp_20q13.2	0.877	1
PRICKLE3	Del_9p23	0.877	1
SHISA4	Del_9p23	0.877	1
UBC	Amp_3q26.32	0.877	1
AKT2	Del_9p23	0.877	1
BCORL1	Amp_8q24.21	0.877	1
CASZ1	8p-Amp	0.877	1
DLG1	18q-Del	0.877	1
NBPF9	Del_9p23	0.877	1
20p-Amp	6q-Del	0.877	1
8q-Amp	Del_12q23.1	0.877	1
8q-Amp	Del_12q24.31	0.877	1
17p-Del	Amp_3p25.1	0.877	1
22q-Del	Del_7q36.1	0.877	1
Amp_15q26.3	Del_1p36.13	0.877	1
AARS	Amp_8q24.21	0.878	1
KRAS	Amp_1p22.3	0.878	1
RB1	HRNR	0.878	1
RB1	Amp_10p15.1	0.878	1
RUNX1	PCNXL2	0.878	1
TP53	TGS1	0.878	1
CASZ1	Amp_11q13.3	0.878	1
CXCR3	Amp_1p22.3	0.878	1
RHOA	Amp_1p22.3	0.878	1
TARBP2	Amp_1p22.3	0.878	1
TCP11	Amp_1p22.3	0.878	1
ZMYM3	Amp_19p13.12	0.878	1
Amp_14q21.1	Del_20p13	0.878	1
FOXA1	Amp_8p11.23	0.879	1
NCOR1	PIK3R1	0.879	1
NCOR1	BCORL1	0.879	1
PIK3R1	Amp_4q13.3	0.879	1
PIK3R1	Del_18q23	0.879	1
ZFP36L2	Amp_6p23	0.879	1
ABCA8	17q-Amp	0.879	1
CCNL2	Amp_6p23	0.879	1
ZNF41	Del_15q13.1	0.879	1
ANKRD20A4	Amp_6p23	0.879	1
BCORL1	Amp_4q13.3	0.879	1
FGFR2	Del_15q13.1	0.879	1
MR1	Amp_6p23	0.879	1
ZNF687	Del_15q13.1	0.879	1
16p-Amp	Amp_11q13.3	0.879	1
7p-Amp	5q-Del	0.879	1
8q-Amp	Del_15q13.1	0.879	1
16q-Del	Del_12p13.1	0.879	1
Amp_14q21.1	Del_3p21.31	0.879	1
APC	Amp_17q12	0.88	1
AQP12A	Amp_10p15.1	0.88	1
CASP8	Amp_1p22.3	0.88	1
HIST1H2BC	Amp_10p15.1	0.88	1
MAP3K1	RPGR	0.88	1
MYB	Amp_1p22.3	0.88	1
VCPIP1	Amp_8p11.23	0.88	1
WSCD2	7p-Amp	0.88	1
ZFP36L1	Amp_8p11.23	0.88	1
AKD1	Del_5q11.2	0.88	1
ERBB3	Del_9q21.11	0.88	1
ICOSLG	Amp_10p15.1	0.88	1
OR2T35	Del_8p23.2	0.88	1
SPRR2B	Amp_10q22.3	0.88	1
CCDC82	Amp_10p15.1	0.88	1
CXCR3	Amp_10p15.1	0.88	1
KCNN3	Amp_8p11.23	0.88	1
OXCT2	Del_8p23.2	0.88	1
RHBG	Del_8p23.2	0.88	1
SDC1	Amp_10q22.3	0.88	1
TCP11	Amp_10p15.1	0.88	1
6q-Del	Del_11p15.5	0.88	1
9p-Del	Amp_17q12	0.88	1
Amp_3p25.1	Amp_19p13.12	0.88	1
AARS	Del_20p13	0.881	1
AQP12A	ERBB2	0.881	1
AQP12A	DOCK11	0.881	1
ASB10	FBXW7	0.881	1
ASB10	PIK3R1	0.881	1
ASB10	ABCA8	0.881	1
ASB10	BCORL1	0.881	1
CASP8	13q-Del	0.881	1
EPDR1	COL6A5	0.881	1
ERBB2	HIST1H2BC	0.881	1
ERBB2	ICOSLG	0.881	1
ERBB2	OR6C76	0.881	1
ERBB2	CXCR3	0.881	1
ERBB2	RHOA	0.881	1
ERBB2	TARBP2	0.881	1
ERBB2	TCP11	0.881	1
FAM20C	SPEN	0.881	1
FAM20C	7q-Amp	0.881	1
FAM86B1	FBXW7	0.881	1
FAM86B1	PIK3R1	0.881	1
FAM86B1	ABCA8	0.881	1
FBXW7	GYG2	0.881	1
FBXW7	MORN1	0.881	1
FBXW7	PSIP1	0.881	1
FBXW7	SLC35B2	0.881	1
FBXW7	USP36	0.881	1
GPS2	HIST1H3B	0.881	1
GPS2	THEM5	0.881	1
GPS2	PPEF1	0.881	1
GPS2	ZNF41	0.881	1
GPS2	FGFR2	0.881	1
GPS2	IRS4	0.881	1
GPS2	ZNF687	0.881	1
GPS2	Amp_13q34	0.881	1
HIST1H3B	THEM5	0.881	1
HIST1H3B	GPRIN2	0.881	1
HIST1H3B	ZNF41	0.881	1
HIST1H3B	FGFR2	0.881	1
HIST1H3B	ZNF687	0.881	1
HLA-DRB5	7q-Amp	0.881	1
PIK3R1	TCP10	0.881	1
PIK3R1	GRHL2	0.881	1
PIK3R1	GYG2	0.881	1
PIK3R1	MORN1	0.881	1
PIK3R1	PSIP1	0.881	1
PIK3R1	USP36	0.881	1
PIK3R1	1q-Amp	0.881	1
RAB42	SPEN	0.881	1
TCP10	ABCA8	0.881	1
TCP10	BCORL1	0.881	1
THEM5	PPEF1	0.881	1
THEM5	ZNF41	0.881	1
THEM5	IRS4	0.881	1
THEM5	ZNF687	0.881	1
THEM5	Amp_1q44	0.881	1
ZFP36L1	9q-Del	0.881	1
ABCA8	GRHL2	0.881	1
ABCA8	MORN1	0.881	1
ABCA8	TPP2	0.881	1
ABCA8	USP36	0.881	1
ANKRD12	Del_15q13.1	0.881	1
ATXN2	Amp_6p23	0.881	1
CCL13	SPEN	0.881	1
COL6A5	DLX6	0.881	1
COL6A5	FXYD5	0.881	1
COL6A5	SHISA4	0.881	1
COL6A5	CDC42EP1	0.881	1
COL6A5	MKL1	0.881	1
COL6A5	NBPF9	0.881	1
ERBB3	Del_4q35.1	0.881	1
GPRIN2	ZNF41	0.881	1
GPRIN2	FGFR2	0.881	1
GPRIN2	IRS4	0.881	1
GPRIN2	ZNF687	0.881	1
GPRIN2	Amp_13q34	0.881	1
GRHL2	BCORL1	0.881	1
GYG2	BCORL1	0.881	1
HLA-C	9q-Del	0.881	1
HLA-C	Del_20p13	0.881	1
ICOSLG	DOCK11	0.881	1
NFE2L3	15q-Del	0.881	1
NFE2L3	Del_20p13	0.881	1
OR2T35	SPEN	0.881	1
OR2T35	7q-Amp	0.881	1
OR6C76	DOCK11	0.881	1
PPEF1	ZNF41	0.881	1
PPEF1	FGFR2	0.881	1
PPEF1	Amp_13q34	0.881	1
UBC	13q-Del	0.881	1
ZNF41	ZNF687	0.881	1
BCORL1	C15orf39	0.881	1
BCORL1	PSIP1	0.881	1
BCORL1	SLC35B2	0.881	1
BCORL1	1q-Amp	0.881	1
CABYR	DOCK11	0.881	1
CEP57	DOCK11	0.881	1
CXCR3	DOCK11	0.881	1
DOCK11	RHOA	0.881	1
DOCK11	TCP11	0.881	1
EIF4A2	Del_20p13	0.881	1
FGFR2	IRS4	0.881	1
FGFR2	ZNF687	0.881	1
IRS4	Amp_13q34	0.881	1
KCNN3	9q-Del	0.881	1
OXCT2	SPEN	0.881	1
OXCT2	7q-Amp	0.881	1
PAX2	SPEN	0.881	1
PAX2	7q-Amp	0.881	1
RHBG	7q-Amp	0.881	1
RIBC1	7q-Amp	0.881	1
SPEN	ZNF362	0.881	1
TNRC6B	Del_15q13.1	0.881	1
TTPAL	7q-Amp	0.881	1
ZBTB7C	7q-Amp	0.881	1
4q-Del	Amp_12q15	0.881	1
ACTL6B	CASP8	0.882	1
ACTL6B	MYB	0.882	1
ACTL6B	FHOD3	0.882	1
ACTL6B	UBC	0.882	1
ACTL6B	FRMPD2	0.882	1
ACTL6B	TGS1	0.882	1
ACTL6B	Del_16q24.3	0.882	1
APC	16p-Del	0.882	1
C1QTNF5	CTCF	0.882	1
C1QTNF5	PIWIL1	0.882	1
C1QTNF5	ANKRD12	0.882	1
C1QTNF5	TNRC6B	0.882	1
C1QTNF5	1q-Amp	0.882	1
CASP8	PTPN22	0.882	1
CASP8	TBL1XR1	0.882	1
CASP8	PRICKLE3	0.882	1
CASP8	ANGPT4	0.882	1
CASP8	ATHL1	0.882	1
CASP8	1q-Del	0.882	1
CBFB	1p-Del	0.882	1
CBFB	Amp_14q21.1	0.882	1
CDKN1B	MYB	0.882	1
CDKN1B	FHOD3	0.882	1
CDKN1B	UBC	0.882	1
CTCF	PTHLH	0.882	1
CTCF	SMAD2	0.882	1
CTCF	SMAD4	0.882	1
CTCF	ZFP36L2	0.882	1
CTCF	ATXN7L1	0.882	1
CTCF	CCNL2	0.882	1
CTCF	DST	0.882	1
CTCF	OR4D10	0.882	1
CTCF	MR1	0.882	1
CTCF	TFE3	0.882	1
FAM20C	Del_6q27	0.882	1
FBXW7	Del_2q37.3	0.882	1
MAP2K4	AKD1	0.882	1
MYB	PTPN22	0.882	1
MYB	PRICKLE3	0.882	1
MYB	ANGPT4	0.882	1
MYB	ATHL1	0.882	1
MYB	1q-Del	0.882	1
PIWIL1	ZFP36L2	0.882	1
PIWIL1	OR4D10	0.882	1
PIWIL1	ANKRD20A4	0.882	1
PTHLH	RPGR	0.882	1
PTHLH	TAF1L	0.882	1
PTHLH	ANKRD12	0.882	1
PTHLH	ERBB3	0.882	1
PTHLH	1q-Amp	0.882	1
PTPN22	FHOD3	0.882	1
PTPN22	FRMPD2	0.882	1
PTPN22	Del_16q24.3	0.882	1
RPGR	ZFP36L2	0.882	1
RPGR	ANKRD20A4	0.882	1
SMAD2	1q-Amp	0.882	1
SMAD4	TAF1L	0.882	1
TAF1L	ATXN7L1	0.882	1
TAF1L	CCNL2	0.882	1
TAF1L	DST	0.882	1
TBL1XR1	FHOD3	0.882	1
TBL1XR1	UBC	0.882	1
TBL1XR1	FRMPD2	0.882	1
TBL1XR1	TGS1	0.882	1
WSCD2	Del_8p23.2	0.882	1
ZFP36L2	ANKRD12	0.882	1
ZFP36L2	TNRC6B	0.882	1
ANKRD12	ATXN7L1	0.882	1
ANKRD12	ANKRD20A4	0.882	1
ANKRD12	TFE3	0.882	1
DNAH12	16p-Del	0.882	1
ERBB3	OR4D10	0.882	1
ERBB3	ANKRD20A4	0.882	1
ERBB3	TFE3	0.882	1
FHOD3	PRICKLE3	0.882	1
FHOD3	ATHL1	0.882	1
FHOD3	1q-Del	0.882	1
HRNR	16q-Del	0.882	1
OR2T35	Del_6q27	0.882	1
PRICKLE3	FRMPD2	0.882	1
PRICKLE3	TGS1	0.882	1
UBC	ANGPT4	0.882	1
UBC	1q-Del	0.882	1
WDR52	16p-Del	0.882	1
XBP1	Del_6q27	0.882	1
ANGPT4	FRMPD2	0.882	1
ANGPT4	TGS1	0.882	1
ANKRD20A4	TNRC6B	0.882	1
ATHL1	FRMPD2	0.882	1
FRMPD2	1q-Del	0.882	1
MLL4	Amp_1q44	0.882	1
MR1	TNRC6B	0.882	1
OXCT2	Del_6q27	0.882	1
PSIP1	Del_12p13.1	0.882	1
SLC35B2	Del_12p13.1	0.882	1
TFE3	1q-Amp	0.882	1
TGS1	1q-Del	0.882	1
TTPAL	Del_6q27	0.882	1
USP36	Del_12p13.1	0.882	1
ZBTB7C	Del_6q27	0.882	1
ZNF362	Del_6q27	0.882	1
16p-Del	Amp_14q21.1	0.882	1
17p-Del	Amp_19q13.42	0.882	1
Amp_1q44	Amp_6p23	0.882	1
Amp_11p13	Del_1p36.13	0.882	1
CDH1	AKD1	0.883	1
PTEN	18p-Del	0.883	1
TP53	17p-Del	0.883	1
VCPIP1	Amp_1q44	0.883	1
ZFP36L1	Amp_1q44	0.883	1
SPRR2B	17q-Amp	0.883	1
SPRR2B	Amp_4q13.3	0.883	1
FRMPD2	Amp_10p15.1	0.883	1
SDC1	17q-Amp	0.883	1
8p-Del	Amp_11p13	0.883	1
Amp_6p23	Del_11q23.3	0.883	1
ACTL6B	Del_11q23.3	0.884	1
NCOR1	15q-Del	0.884	1
PIWIL1	17q-Del	0.884	1
RB1	SPEN	0.884	1
RPGR	Del_21q11.2	0.884	1
TAF1L	17q-Del	0.884	1
TAF1L	Amp_19q12	0.884	1
TBL1XR1	Del_11q23.3	0.884	1
VCPIP1	WSCD2	0.884	1
VCPIP1	DLG1	0.884	1
WSCD2	ZFP36L1	0.884	1
WSCD2	HLA-C	0.884	1
WSCD2	KCNN3	0.884	1
WSCD2	Amp_3p25.1	0.884	1
WSCD2	Del_7p22.3	0.884	1
ZFP36L1	CASZ1	0.884	1
ZFP36L1	DLG1	0.884	1
ZFP36L1	MLL4	0.884	1
AKD1	15q-Del	0.884	1
AKD1	9q-Del	0.884	1
AKD1	Del_20p13	0.884	1
ANKRD12	17q-Del	0.884	1
GRHL2	Del_6q27	0.884	1
HLA-C	DLG1	0.884	1
HLA-C	MLL4	0.884	1
NFE2L3	DLG1	0.884	1
PRICKLE3	Del_11q23.3	0.884	1
CASZ1	KCNN3	0.884	1
DLG1	KCNN3	0.884	1
DLG1	Del_7p22.3	0.884	1
PCNXL2	Del_9p23	0.884	1
TFE3	Amp_8q24.21	0.884	1
TNRC6B	Amp_19q12	0.884	1
USP36	Del_6q27	0.884	1
6q-Del	Amp_17q23.1	0.884	1
9p-Del	Amp_19p13.12	0.884	1
HIST1H2BC	Del_10q23.31	0.885	1
PIK3R1	Del_9q34.2	0.885	1
RUNX1	Amp_1q21.3	0.885	1
SF3B1	Del_12p13.1	0.885	1
ABCA8	11p-Del	0.885	1
ABCA8	Del_9q34.2	0.885	1
AKD1	Del_3p21.31	0.885	1
DST	16q-Del	0.885	1
FXYD5	Del_19p13.3	0.885	1
MYH9	Del_12p13.1	0.885	1
WDR52	Del_12p13.1	0.885	1
AKT2	Del_19p13.3	0.885	1
CABYR	Amp_11q13.3	0.885	1
CXCR3	Amp_11q13.3	0.885	1
KDM6A	Del_12p13.1	0.885	1
MKL1	Del_19p13.3	0.885	1
NBPF9	Del_19p13.3	0.885	1
TARBP2	Amp_11q13.3	0.885	1
TARBP2	Del_10q23.31	0.885	1
TCP11	Amp_11q13.3	0.885	1
Amp_1q21.3	Del_1p36.13	0.885	1
Amp_6q21	Del_12p13.1	0.885	1
Amp_17q23.1	Del_18q23	0.885	1
ARID1A	MAP3K1	0.886	1
CBFB	DLX6	0.886	1
CBFB	FXYD5	0.886	1
CBFB	SHISA4	0.886	1
CBFB	MKL1	0.886	1
EPDR1	FOXA1	0.886	1
FOXA1	DLX6	0.886	1
FOXA1	FXYD5	0.886	1
FOXA1	SHISA4	0.886	1
FOXA1	AKT2	0.886	1
FOXA1	CDC42EP1	0.886	1
FOXA1	MKL1	0.886	1
FOXA1	NBPF9	0.886	1
HIST1H3B	16p-Amp	0.886	1
MAP3K1	NF1	0.886	1
PIWIL1	Amp_1q44	0.886	1
THEM5	16p-Amp	0.886	1
ANKRD12	Amp_1q44	0.886	1
HRNR	Del_6q15	0.886	1
PPEF1	16p-Amp	0.886	1
ATHL1	5q-Del	0.886	1
PCNXL2	Del_5q21.3	0.886	1
16p-Amp	Amp_11q14.1	0.886	1
16q-Del	Del_9p21.3	0.886	1
17p-Del	Amp_3q26.32	0.886	1
9q-Del	Del_12q23.1	0.886	1
AQP12A	GATA3	0.887	1
AQP12A	RB1	0.887	1
ARID1A	Del_18q23	0.887	1
ASB10	4q-Del	0.887	1
FAM86B1	4q-Del	0.887	1
GATA3	RHOA	0.887	1
GATA3	TCP11	0.887	1
HIST1H2BC	9p-Del	0.887	1
MLL3	16p-Amp	0.887	1
PIWIL1	Amp_12q15	0.887	1
PTEN	8p-Amp	0.887	1
RB1	ICOSLG	0.887	1
RB1	MLC1	0.887	1
RB1	OR6C76	0.887	1
RB1	CABYR	0.887	1
RB1	CCDC82	0.887	1
RB1	CEP57	0.887	1
RB1	RHOA	0.887	1
RB1	TCP11	0.887	1
RPGR	Del_6q27	0.887	1
ERBB3	Del_7q36.1	0.887	1
GRHL2	4q-Del	0.887	1
ICOSLG	9p-Del	0.887	1
MLC1	Del_10q26.3	0.887	1
MORN1	4q-Del	0.887	1
CCDC82	9p-Del	0.887	1
CXCR3	Del_10q26.3	0.887	1
NF1	Del_18q23	0.887	1
OXCT2	Del_1p36.13	0.887	1
PAX2	Del_1p36.13	0.887	1
PCNXL2	5p-Amp	0.887	1
PCNXL2	Amp_11p13	0.887	1
20p-Amp	Del_11q23.3	0.887	1
APC	PTEN	0.888	1
ARID1A	Del_10q23.31	0.888	1
ERBB2	Del_17p12	0.888	1
FAM20C	RUNX1	0.888	1
GPS2	1p-Del	0.888	1
GPS2	Amp_14q21.1	0.888	1
HLA-DRB5	RUNX1	0.888	1
PIK3CA	SF3B1	0.888	1
PIK3CA	MYH9	0.888	1
PTEN	DNAH12	0.888	1
PTEN	KDM6A	0.888	1
RAB42	RUNX1	0.888	1
RUNX1	OR2T35	0.888	1
RUNX1	XBP1	0.888	1
RUNX1	DOCK11	0.888	1
RUNX1	OXCT2	0.888	1
RUNX1	PAX2	0.888	1
RUNX1	RHBG	0.888	1
RUNX1	RIBC1	0.888	1
RUNX1	TTPAL	0.888	1
RUNX1	ZBTB7C	0.888	1
RUNX1	ZNF362	0.888	1
THEM5	Amp_14q21.1	0.888	1
TP53	HRNR	0.888	1
ATXN2	Amp_10q22.3	0.888	1
ATXN7L1	Amp_1q44	0.888	1
DST	Amp_13q34	0.888	1
FHOD3	Del_10q23.31	0.888	1
PPEF1	1p-Del	0.888	1
ZNF41	Amp_14q21.1	0.888	1
FGFR2	Amp_14q21.1	0.888	1
MED23	Amp_10q22.3	0.888	1
MR1	Amp_1q44	0.888	1
NF1	Del_10q23.31	0.888	1
TNRC6B	Amp_8p11.21	0.888	1
ZMYM3	Amp_10q22.3	0.888	1
ZNF687	Amp_14q21.1	0.888	1
11q-Del	Amp_14q21.1	0.888	1
14q-Del	Amp_19q12	0.888	1
Amp_1q21.3	Del_12q23.1	0.888	1
Amp_1q44	Del_10q26.3	0.888	1
Amp_12p13.33	Del_7q36.1	0.888	1
Del_7q36.1	Del_9q21.11	0.888	1
ACTL6B	Del_19p13.3	0.889	1
APC	C1QTNF5	0.889	1
APC	ZFP36L2	0.889	1
APC	ANKRD20A4	0.889	1
AQP12A	4p-Del	0.889	1
ARID1A	Del_7p22.3	0.889	1
ASB10	ATXN2	0.889	1
ASB10	MED23	0.889	1
ASB10	RBMX	0.889	1
ASB10	ZMYM3	0.889	1
C1QTNF5	SF3B1	0.889	1
C1QTNF5	DNAH12	0.889	1
C1QTNF5	MYH9	0.889	1
C1QTNF5	WDR52	0.889	1
EPDR1	Del_11p15.5	0.889	1
FAM86B1	ATXN2	0.889	1
FAM86B1	MED23	0.889	1
FAM86B1	RBMX	0.889	1
FAM86B1	ZMYM3	0.889	1
GPS2	PIK3CA	0.889	1
HIST1H3B	20q-Amp	0.889	1
NCOR1	Amp_17q12	0.889	1
PIK3CA	ZNF41	0.889	1
PIK3CA	FGFR2	0.889	1
PTHLH	DNAH12	0.889	1
PTHLH	MYH9	0.889	1
PTHLH	WDR52	0.889	1
SF3B1	SMAD2	0.889	1
SF3B1	ZFP36L2	0.889	1
SF3B1	OR4D10	0.889	1
SF3B1	ANKRD20A4	0.889	1
SF3B1	TFE3	0.889	1
SMAD2	MYH9	0.889	1
SMAD4	DNAH12	0.889	1
TCP10	ATXN2	0.889	1
TCP10	MED23	0.889	1
TCP10	RBMX	0.889	1
TCP10	ZMYM3	0.889	1
THEM5	20q-Amp	0.889	1
ZFP36L2	DNAH12	0.889	1
ZFP36L2	MYH9	0.889	1
ZFP36L2	WDR52	0.889	1
ZFP36L2	KDM6A	0.889	1
ATXN2	GRHL2	0.889	1
ATXN2	TPP2	0.889	1
CCNL2	DNAH12	0.889	1
DLX6	Del_11p15.5	0.889	1
DLX6	Del_14q24.1	0.889	1
FXYD5	Del_11p15.5	0.889	1
GRHL2	MED23	0.889	1
GRHL2	MUC6	0.889	1
GRHL2	RBMX	0.889	1
GRHL2	ZMYM3	0.889	1
GYG2	ZMYM3	0.889	1
MLC1	4p-Del	0.889	1
MORN1	MUC6	0.889	1
MORN1	RBMX	0.889	1
MYH9	OR4D10	0.889	1
MYH9	ANKRD20A4	0.889	1
MYH9	TFE3	0.889	1
PPEF1	Amp_11q14.1	0.889	1
SHISA4	Del_11p15.5	0.889	1
WDR52	ANKRD20A4	0.889	1
WDR52	TFE3	0.889	1
ZNF41	20q-Amp	0.889	1
AKT2	Del_11p15.5	0.889	1
AKT2	Del_14q24.1	0.889	1
ANGPT4	Del_19p13.3	0.889	1
ANKRD20A4	KDM6A	0.889	1
ATHL1	Del_19p13.3	0.889	1
C15orf39	MED23	0.889	1
C15orf39	MUC6	0.889	1
C15orf39	RBMX	0.889	1
C15orf39	ZMYM3	0.889	1
CCDC82	4p-Del	0.889	1
CEP57	4p-Del	0.889	1
IRS4	Amp_11q14.1	0.889	1
MED23	PSIP1	0.889	1
MED23	SLC35B2	0.889	1
MED23	TPP2	0.889	1
MED23	USP36	0.889	1
MUC6	SLC35B2	0.889	1
MUC6	TPP2	0.889	1
MUC6	USP36	0.889	1
NBPF9	Del_11p15.5	0.889	1
NBPF9	Del_14q24.1	0.889	1
PSIP1	RBMX	0.889	1
PSIP1	ZMYM3	0.889	1
RBMX	SLC35B2	0.889	1
RBMX	USP36	0.889	1
TARBP2	4p-Del	0.889	1
TCP11	4p-Del	0.889	1
7p-Amp	Amp_11q14.1	0.889	1
16p-Del	Del_12q24.31	0.889	1
Amp_1p22.3	Del_16q24.3	0.889	1
Amp_4q13.3	Del_9p21.3	0.889	1
Amp_6p23	Del_9p21.3	0.889	1
ASB10	Amp_12p13.33	0.89	1
ASB10	Del_9q21.11	0.89	1
CBFB	COL6A5	0.89	1
FAM86B1	MAP3K1	0.89	1
FAM86B1	Del_9q21.11	0.89	1
FOXA1	COL6A5	0.89	1
MAP3K1	GYG2	0.89	1
MAP3K1	MORN1	0.89	1
MAP3K1	PSIP1	0.89	1
MAP3K1	SLC35B2	0.89	1
NCOR1	Del_19q13.32	0.89	1
PIWIL1	16p-Amp	0.89	1
ANKRD12	16p-Amp	0.89	1
COL6A5	Del_6p25.3	0.89	1
GRHL2	Del_9q21.11	0.89	1
MORN1	Amp_12p13.33	0.89	1
CEP57	Del_8p23.2	0.89	1
PSIP1	Amp_12p13.33	0.89	1
SLC35B2	Del_9q21.11	0.89	1
TCP11	Del_8p23.2	0.89	1
TNRC6B	16p-Amp	0.89	1
TPP2	Del_9q21.11	0.89	1
USP36	Amp_12p13.33	0.89	1
USP36	Del_9q21.11	0.89	1
16p-Amp	Amp_1q21.3	0.89	1
20q-Amp	Del_6p25.3	0.89	1
7p-Amp	Del_22q13.32	0.89	1
Amp_6p23	Amp_20q13.2	0.89	1
Amp_6p23	Del_17p12	0.89	1
Amp_13q34	Del_6p25.3	0.89	1
Amp_20q13.2	Del_12q23.1	0.89	1
Del_6p25.3	Del_19p13.3	0.89	1
Del_9q21.11	Del_19q13.32	0.89	1
ACTL6B	GPS2	0.891	1
ACTL6B	HIST1H3B	0.891	1
ACTL6B	THEM5	0.891	1
ACTL6B	GPRIN2	0.891	1
ACTL6B	PPEF1	0.891	1
ACTL6B	FGFR2	0.891	1
ACTL6B	ZNF687	0.891	1
ARID1A	Del_17q21.31	0.891	1
ASB10	Del_1p36.13	0.891	1
CASP8	9p-Del	0.891	1
CDKN1B	GPS2	0.891	1
CDKN1B	THEM5	0.891	1
CDKN1B	GPRIN2	0.891	1
CDKN1B	PPEF1	0.891	1
CDKN1B	ZNF41	0.891	1
CDKN1B	ZNF687	0.891	1
FOXA1	11p-Del	0.891	1
GATA3	UBC	0.891	1
GPS2	PTPN22	0.891	1
GPS2	TBL1XR1	0.891	1
GPS2	PRICKLE3	0.891	1
GPS2	ANGPT4	0.891	1
GPS2	ATHL1	0.891	1
GPS2	1q-Del	0.891	1
HIST1H2BC	18p-Del	0.891	1
HIST1H3B	TBL1XR1	0.891	1
HIST1H3B	PRICKLE3	0.891	1
HIST1H3B	ATHL1	0.891	1
HIST1H3B	1q-Del	0.891	1
MLL3	ANKRD12	0.891	1
PTEN	4q-Del	0.891	1
PTPN22	THEM5	0.891	1
PTPN22	GPRIN2	0.891	1
PTPN22	FGFR2	0.891	1
PTPN22	ZNF687	0.891	1
TBL1XR1	THEM5	0.891	1
TBL1XR1	GPRIN2	0.891	1
TBL1XR1	PPEF1	0.891	1
TBL1XR1	ZNF41	0.891	1
TBL1XR1	FGFR2	0.891	1
TBL1XR1	IRS4	0.891	1
TBL1XR1	ZNF687	0.891	1
THEM5	PRICKLE3	0.891	1
THEM5	ATHL1	0.891	1
THEM5	1q-Del	0.891	1
FHOD3	9p-Del	0.891	1
FHOD3	Del_10q26.3	0.891	1
GPRIN2	PRICKLE3	0.891	1
GPRIN2	ANGPT4	0.891	1
GPRIN2	ATHL1	0.891	1
GPRIN2	1q-Del	0.891	1
ICOSLG	18p-Del	0.891	1
PPEF1	PRICKLE3	0.891	1
PPEF1	ANGPT4	0.891	1
PPEF1	1q-Del	0.891	1
PRICKLE3	ZNF41	0.891	1
PRICKLE3	FGFR2	0.891	1
PRICKLE3	IRS4	0.891	1
UBC	9p-Del	0.891	1
UBC	Del_19q13.32	0.891	1
ZNF41	ANGPT4	0.891	1
ZNF41	ATHL1	0.891	1
ZNF41	1q-Del	0.891	1
ANGPT4	ZNF687	0.891	1
ATHL1	FGFR2	0.891	1
CEP57	18p-Del	0.891	1
CXCR3	18p-Del	0.891	1
FGFR2	1q-Del	0.891	1
FRMPD2	9p-Del	0.891	1
IRS4	1q-Del	0.891	1
NF1	17q-Del	0.891	1
TCP11	18p-Del	0.891	1
TGS1	Del_10q26.3	0.891	1
ZNF687	1q-Del	0.891	1
8p-Amp	Amp_14q21.1	0.891	1
16p-Del	Del_21q11.2	0.891	1
17p-Del	Amp_6p23	0.891	1
Amp_15q26.3	Del_20p13	0.891	1
ACTL6B	5p-Amp	0.892	1
ACTL6B	Amp_6q21	0.892	1
ARID1A	GATA3	0.892	1
CASP8	Del_16q24.3	0.892	1
FAM20C	TBX3	0.892	1
HIST1H3B	Del_12q24.31	0.892	1
HLA-DRB5	TBX3	0.892	1
RAB42	TBX3	0.892	1
TBX3	CCL13	0.892	1
TBX3	OR2T35	0.892	1
TBX3	OXCT2	0.892	1
TBX3	RHBG	0.892	1
TBX3	TTPAL	0.892	1
TBX3	ZBTB7C	0.892	1
TBX3	ZNF362	0.892	1
GPRIN2	Del_12q24.31	0.892	1
PPEF1	Del_12q23.1	0.892	1
PRICKLE3	5p-Amp	0.892	1
PRICKLE3	Amp_11p13	0.892	1
PRICKLE3	Amp_19q13.42	0.892	1
SPRR2B	Del_22q13.32	0.892	1
UBC	Del_16q24.3	0.892	1
ZNF41	Del_12q23.1	0.892	1
ZNF41	Del_12q24.31	0.892	1
ANGPT4	Amp_6q21	0.892	1
ANGPT4	Amp_19q13.42	0.892	1
FGFR2	Amp_1q21.3	0.892	1
FGFR2	Del_12q23.1	0.892	1
FGFR2	Del_12q24.31	0.892	1
NF1	9p-Del	0.892	1
SDC1	16p-Del	0.892	1
SDC1	Del_22q13.32	0.892	1
TGS1	Del_16q24.3	0.892	1
ZNF687	Del_12q23.1	0.892	1
ZNF687	Del_12q24.31	0.892	1
1q-Amp	Amp_11q13.3	0.892	1
5p-Amp	7p-Amp	0.892	1
7p-Amp	Amp_6q21	0.892	1
1q-Del	Amp_6q21	0.892	1
1q-Del	Amp_11p13	0.892	1
22q-Del	Amp_3p25.1	0.892	1
22q-Del	Del_7p22.3	0.892	1
Amp_19q12	Del_14q24.1	0.892	1
Del_15q13.1	Del_16q24.3	0.892	1
AARS	CASP8	0.893	1
AARS	MYB	0.893	1
AARS	FRMPD2	0.893	1
AQP12A	AKD1	0.893	1
CASP8	VCPIP1	0.893	1
CASP8	ZFP36L1	0.893	1
CASP8	HLA-C	0.893	1
CASP8	NFE2L3	0.893	1
CASP8	EIF4A2	0.893	1
CASP8	KCNN3	0.893	1
FAM20C	Del_3p21.31	0.893	1
FAM20C	Del_9p21.3	0.893	1
FAM86B1	14q-Del	0.893	1
FAM86B1	Amp_19q12	0.893	1
FAM86B1	Del_21q11.2	0.893	1
HIST1H2BC	AKD1	0.893	1
HIST1H2BC	18q-Del	0.893	1
MAP2K4	PIWIL1	0.893	1
MAP2K4	RPGR	0.893	1
MAP2K4	ERBB3	0.893	1
MYB	VCPIP1	0.893	1
MYB	ZFP36L1	0.893	1
MYB	HLA-C	0.893	1
MYB	NFE2L3	0.893	1
MYB	EIF4A2	0.893	1
MYB	KCNN3	0.893	1
NCOR1	MUC6	0.893	1
PIWIL1	Amp_20q13.2	0.893	1
PTPN22	Del_11p15.5	0.893	1
PTPN22	Del_14q24.1	0.893	1
SF3B1	DST	0.893	1
SMAD4	Del_2q37.3	0.893	1
TCP10	17q-Del	0.893	1
VCPIP1	UBC	0.893	1
VCPIP1	FRMPD2	0.893	1
ZFP36L1	FHOD3	0.893	1
ZFP36L1	UBC	0.893	1
ZFP36L1	FRMPD2	0.893	1
ZFP36L1	TGS1	0.893	1
ZFP36L1	Amp_1q21.3	0.893	1
ZFP36L2	Del_2q37.3	0.893	1
AKD1	ICOSLG	0.893	1
AKD1	MLC1	0.893	1
AKD1	CABYR	0.893	1
AKD1	CCDC82	0.893	1
AKD1	CXCR3	0.893	1
AKD1	RHOA	0.893	1
AKD1	TARBP2	0.893	1
AKD1	TCP11	0.893	1
ANKRD12	20q-Amp	0.893	1
ANKRD12	Amp_20q13.2	0.893	1
ATXN2	17q-Amp	0.893	1
CCNL2	Del_2q37.3	0.893	1
COL6A5	Del_4p16.3	0.893	1
ERBB3	20q-Amp	0.893	1
ERBB3	Amp_20q13.2	0.893	1
FHOD3	NFE2L3	0.893	1
FHOD3	EIF4A2	0.893	1
FHOD3	KCNN3	0.893	1
GRHL2	14q-Del	0.893	1
HLA-C	UBC	0.893	1
HLA-C	TGS1	0.893	1
ICOSLG	18q-Del	0.893	1
MORN1	17q-Del	0.893	1
MORN1	Del_21q11.2	0.893	1
NFE2L3	FRMPD2	0.893	1
NFE2L3	Amp_15q26.3	0.893	1
OR2T35	Del_3p21.31	0.893	1
OR2T35	Del_9p21.3	0.893	1
OR4D10	Del_2q37.3	0.893	1
OR6C76	18q-Del	0.893	1
PRICKLE3	Del_11p15.5	0.893	1
UBC	KCNN3	0.893	1
ATHL1	Del_11p15.5	0.893	1
ATHL1	Del_14q24.1	0.893	1
C15orf39	17q-Del	0.893	1
C15orf39	Amp_19q12	0.893	1
CCDC82	8p-Amp	0.893	1
CEP57	18q-Del	0.893	1
EIF4A2	FRMPD2	0.893	1
FRMPD2	KCNN3	0.893	1
KCNN3	TGS1	0.893	1
KCNN3	Amp_15q26.3	0.893	1
MLL4	Amp_19p13.12	0.893	1
MR1	Del_2q37.3	0.893	1
MUC6	17q-Amp	0.893	1
OXCT2	Del_9p21.3	0.893	1
PSIP1	Del_21q11.2	0.893	1
RBMX	17q-Amp	0.893	1
RHBG	Del_3p21.31	0.893	1
SLC35B2	Del_21q11.2	0.893	1
TARBP2	8p-Amp	0.893	1
TCP11	18q-Del	0.893	1
TFE3	Del_2q37.3	0.893	1
TPP2	Amp_19q12	0.893	1
USP36	Amp_19q12	0.893	1
ZNF362	Del_9p21.3	0.893	1
20q-Amp	Amp_8p11.21	0.893	1
7p-Amp	4q-Del	0.893	1
8p-Amp	Amp_6p23	0.893	1
1q-Del	Del_11p15.5	0.893	1
HIST1H3B	Del_5q11.2	0.894	1
THEM5	Del_5q11.2	0.894	1
TP53	Amp_14q21.1	0.894	1
CASZ1	Del_22q13.32	0.894	1
DOCK11	Del_17q21.31	0.894	1
FGFR2	Del_5q11.2	0.894	1
PCNXL2	Amp_6p23	0.894	1
SPEN	16p-Amp	0.894	1
ZNF687	Del_5q11.2	0.894	1
20p-Amp	Amp_10p15.1	0.894	1
Amp_3q26.32	Del_22q13.32	0.894	1
ARID1A	Del_7q36.1	0.895	1
CASP8	7p-Amp	0.895	1
EPDR1	PCNXL2	0.895	1
HLA-DRB5	PIK3CA	0.895	1
PIK3CA	XBP1	0.895	1
PIK3CA	RHBG	0.895	1
PIK3CA	RIBC1	0.895	1
PIK3CA	TTPAL	0.895	1
PIK3CA	ZNF362	0.895	1
PTEN	SDC1	0.895	1
RAB42	11q-Del	0.895	1
TCP10	Amp_12q15	0.895	1
DLX6	PCNXL2	0.895	1
ERBB3	8p-Del	0.895	1
FHOD3	7p-Amp	0.895	1
GRHL2	Amp_12q15	0.895	1
GRHL2	Del_7q36.1	0.895	1
GYG2	Amp_12q15	0.895	1
GYG2	Del_7q36.1	0.895	1
ICOSLG	6q-Del	0.895	1
MLC1	6q-Del	0.895	1
MORN1	Del_7q36.1	0.895	1
OR2T35	11q-Del	0.895	1
SPRR2B	Amp_20q13.2	0.895	1
UBC	7p-Amp	0.895	1
AKT2	PCNXL2	0.895	1
C15orf39	Amp_12q15	0.895	1
C15orf39	Del_7q36.1	0.895	1
CABYR	6q-Del	0.895	1
CDC42EP1	PCNXL2	0.895	1
CEP57	6q-Del	0.895	1
MLL4	Del_5q21.3	0.895	1
NBPF9	PCNXL2	0.895	1
OXCT2	11q-Del	0.895	1
PAX2	11q-Del	0.895	1
PSIP1	Amp_12q15	0.895	1
RHBG	11q-Del	0.895	1
SDC1	Amp_20q13.2	0.895	1
TPP2	Amp_12q15	0.895	1
TPP2	Del_7q36.1	0.895	1
USP36	Amp_12q15	0.895	1
14q-Del	Del_7q36.1	0.895	1
17q-Del	Amp_12q15	0.895	1
Amp_3q26.32	Amp_4q13.3	0.895	1
Amp_8p11.21	Del_22q13.32	0.895	1
Amp_12q15	Del_21q11.2	0.895	1
Amp_20q13.2	Del_17q21.31	0.895	1
ARID1A	FAM20C	0.896	1
ARID1A	RAB42	0.896	1
ARID1A	CCL13	0.896	1
ARID1A	OR2T35	0.896	1
ARID1A	OXCT2	0.896	1
ARID1A	ZBTB7C	0.896	1
ARID1A	ZNF362	0.896	1
C1QTNF5	FBXW7	0.896	1
C1QTNF5	BCORL1	0.896	1
CDH1	GPS2	0.896	1
CDH1	IRS4	0.896	1
FAM20C	NF1	0.896	1
FBXW7	SMAD4	0.896	1
FBXW7	ZFP36L2	0.896	1
FBXW7	CCNL2	0.896	1
FBXW7	ANKRD20A4	0.896	1
FBXW7	Amp_1q21.3	0.896	1
HIST1H3B	Del_1p22.1	0.896	1
HLA-DRB5	NF1	0.896	1
PIK3R1	SMAD4	0.896	1
PIK3R1	ZFP36L2	0.896	1
PIK3R1	ANKRD20A4	0.896	1
PIK3R1	TFE3	0.896	1
PTHLH	ABCA8	0.896	1
PTHLH	BCORL1	0.896	1
PTHLH	11p-Del	0.896	1
PTHLH	Del_9q34.2	0.896	1
RAB42	NF1	0.896	1
SMAD2	ABCA8	0.896	1
SMAD2	BCORL1	0.896	1
SMAD2	11p-Del	0.896	1
SMAD4	BCORL1	0.896	1
THEM5	Del_1p22.1	0.896	1
ZFP36L2	ABCA8	0.896	1
ZFP36L2	BCORL1	0.896	1
ABCA8	OR4D10	0.896	1
ABCA8	TFE3	0.896	1
ATXN7L1	BCORL1	0.896	1
ATXN7L1	Del_9q34.2	0.896	1
CCL13	NF1	0.896	1
CCNL2	11p-Del	0.896	1
CCNL2	Del_9q34.2	0.896	1
OR2T35	NF1	0.896	1
OR4D10	BCORL1	0.896	1
ANKRD20A4	BCORL1	0.896	1
BCORL1	TFE3	0.896	1
CEP57	Del_22q13.32	0.896	1
NF1	OXCT2	0.896	1
NF1	PAX2	0.896	1
NF1	TTPAL	0.896	1
NF1	ZNF362	0.896	1
TFE3	Del_9q34.2	0.896	1
TGS1	18p-Del	0.896	1
7p-Amp	Del_9p23	0.896	1
8p-Amp	Del_8p23.2	0.896	1
16q-Del	Del_11p15.5	0.896	1
Del_1p22.1	Del_17q21.31	0.896	1
ASB10	WSCD2	0.897	1
ASB10	CASZ1	0.897	1
ASB10	DLG1	0.897	1
ASB10	MLL4	0.897	1
CTCF	Del_17p12	0.897	1
FAM86B1	WSCD2	0.897	1
FAM86B1	CASZ1	0.897	1
FAM86B1	DLG1	0.897	1
FAM86B1	MLL4	0.897	1
PIWIL1	Del_17p12	0.897	1
RB1	RUNX1	0.897	1
RB1	18q-Del	0.897	1
SF3B1	Amp_11q13.3	0.897	1
SMAD4	Amp_1q21.3	0.897	1
TCP10	WSCD2	0.897	1
TCP10	DLG1	0.897	1
TCP10	MLL4	0.897	1
VCPIP1	Amp_11q13.3	0.897	1
WSCD2	GRHL2	0.897	1
WSCD2	GYG2	0.897	1
WSCD2	MORN1	0.897	1
WSCD2	C15orf39	0.897	1
WSCD2	PSIP1	0.897	1
WSCD2	SLC35B2	0.897	1
WSCD2	USP36	0.897	1
AKD1	17p-Del	0.897	1
ANKRD12	Del_1p36.13	0.897	1
CCNL2	Amp_1q21.3	0.897	1
DNAH12	Amp_11q13.3	0.897	1
ERBB3	Del_17p12	0.897	1
FXYD5	Del_4q35.1	0.897	1
FXYD5	Del_15q13.1	0.897	1
GRHL2	DLG1	0.897	1
GRHL2	MLL4	0.897	1
GYG2	DLG1	0.897	1
MORN1	CASZ1	0.897	1
MORN1	DLG1	0.897	1
SHISA4	Amp_8q24.21	0.897	1
SHISA4	Del_15q13.1	0.897	1
AKT2	Amp_8q24.21	0.897	1
AKT2	Del_4q35.1	0.897	1
C15orf39	DLG1	0.897	1
C15orf39	MLL4	0.897	1
CASZ1	SLC35B2	0.897	1
CASZ1	USP36	0.897	1
CDC42EP1	Amp_8q24.21	0.897	1
CDC42EP1	Del_4q35.1	0.897	1
CDC42EP1	Del_15q13.1	0.897	1
CEP57	Amp_8p11.21	0.897	1
CXCR3	Amp_8p11.21	0.897	1
DLG1	PSIP1	0.897	1
DLG1	SLC35B2	0.897	1
DLG1	TPP2	0.897	1
DLG1	USP36	0.897	1
KCNN3	Amp_11q13.3	0.897	1
KDM6A	Amp_11q13.3	0.897	1
MKL1	Amp_8q24.21	0.897	1
MLL4	SLC35B2	0.897	1
MLL4	TPP2	0.897	1
NBPF9	Del_4q35.1	0.897	1
NBPF9	Del_15q13.1	0.897	1
TARBP2	Amp_8p11.21	0.897	1
TFE3	Amp_1q21.3	0.897	1
TNRC6B	Del_17p12	0.897	1
17q-Amp	11q-Del	0.897	1
7p-Amp	Del_5q21.3	0.897	1
16p-Del	Del_7q36.1	0.897	1
4p-Del	Amp_1p22.3	0.897	1
Amp_6p23	Amp_19q13.42	0.897	1
Amp_6q21	Del_11q23.3	0.897	1
Amp_10q22.3	Del_8p23.2	0.897	1
Amp_11q14.1	Del_17p12	0.897	1
AQP12A	CTCF	0.898	1
AQP12A	PIWIL1	0.898	1
AQP12A	RPGR	0.898	1
AQP12A	TAF1L	0.898	1
AQP12A	ANKRD12	0.898	1
AQP12A	TNRC6B	0.898	1
ASB10	MLL3	0.898	1
ASB10	Del_3p21.31	0.898	1
CTCF	HIST1H2BC	0.898	1
CTCF	KRAS	0.898	1
CTCF	ICOSLG	0.898	1
CTCF	MLC1	0.898	1
CTCF	OR6C76	0.898	1
CTCF	CABYR	0.898	1
CTCF	CCDC82	0.898	1
CTCF	CEP57	0.898	1
CTCF	CXCR3	0.898	1
CTCF	RHOA	0.898	1
CTCF	TARBP2	0.898	1
CTCF	TCP11	0.898	1
FAM86B1	Del_3p21.31	0.898	1
FOXA1	16p-Amp	0.898	1
GATA3	Del_17q21.31	0.898	1
HIST1H2BC	PIWIL1	0.898	1
HIST1H2BC	RPGR	0.898	1
HIST1H2BC	TAF1L	0.898	1
HIST1H2BC	ANKRD12	0.898	1
HIST1H2BC	ERBB3	0.898	1
HIST1H2BC	TNRC6B	0.898	1
KRAS	PIWIL1	0.898	1
KRAS	ERBB3	0.898	1
KRAS	TNRC6B	0.898	1
MAP3K1	Del_22q13.32	0.898	1
MLL3	GRHL2	0.898	1
MLL3	GYG2	0.898	1
MLL3	MORN1	0.898	1
PIK3R1	Del_8p23.2	0.898	1
PIWIL1	ICOSLG	0.898	1
PIWIL1	MLC1	0.898	1
PIWIL1	CABYR	0.898	1
PIWIL1	CCDC82	0.898	1
PIWIL1	CEP57	0.898	1
PIWIL1	CXCR3	0.898	1
PIWIL1	TCP11	0.898	1
PIWIL1	Del_4p16.3	0.898	1
RPGR	ICOSLG	0.898	1
RPGR	MLC1	0.898	1
RPGR	OR6C76	0.898	1
RPGR	CABYR	0.898	1
RPGR	CCDC82	0.898	1
RPGR	CEP57	0.898	1
RPGR	CXCR3	0.898	1
RPGR	RHOA	0.898	1
TAF1L	ICOSLG	0.898	1
TAF1L	MLC1	0.898	1
TAF1L	CABYR	0.898	1
TAF1L	CXCR3	0.898	1
TAF1L	RHOA	0.898	1
TAF1L	TARBP2	0.898	1
TAF1L	TCP11	0.898	1
TCP10	Del_3p21.31	0.898	1
ANKRD12	ICOSLG	0.898	1
ANKRD12	MLC1	0.898	1
ANKRD12	OR6C76	0.898	1
ANKRD12	CABYR	0.898	1
ANKRD12	CXCR3	0.898	1
COL6A5	Del_12p13.1	0.898	1
DST	SDC1	0.898	1
ERBB3	ICOSLG	0.898	1
ERBB3	CEP57	0.898	1
ERBB3	CXCR3	0.898	1
ERBB3	TARBP2	0.898	1
ERBB3	Del_4p16.3	0.898	1
MLC1	TNRC6B	0.898	1
OR6C76	TNRC6B	0.898	1
ATHL1	22q-Del	0.898	1
CXCR3	TNRC6B	0.898	1
KCNN3	Del_18q23	0.898	1
SLC35B2	Del_3p21.31	0.898	1
SPEN	Amp_11q14.1	0.898	1
TARBP2	TNRC6B	0.898	1
TNRC6B	Del_5q11.2	0.898	1
7p-Amp	Del_5q11.2	0.898	1
17p-Del	Amp_8p11.23	0.898	1
18p-Del	Amp_3q26.32	0.898	1
Amp_1p22.3	Amp_8p11.23	0.898	1
Amp_10q22.3	Del_2q37.3	0.898	1
ACTL6B	Amp_13q34	0.899	1
CASP8	8p-Amp	0.899	1
CASP8	Amp_3p25.1	0.899	1
CTCF	Del_20p13	0.899	1
FAM86B1	8q-Amp	0.899	1
MYB	Amp_3p25.1	0.899	1
PIWIL1	HRNR	0.899	1
PIWIL1	Amp_1q21.3	0.899	1
PIWIL1	Del_20p13	0.899	1
RPGR	15q-Del	0.899	1
ANKRD12	HRNR	0.899	1
ANKRD12	15q-Del	0.899	1
ANKRD12	Del_20p13	0.899	1
FHOD3	Del_7p22.3	0.899	1
GPRIN2	Amp_17q12	0.899	1
GYG2	8q-Amp	0.899	1
HRNR	TNRC6B	0.899	1
UBC	Del_7p22.3	0.899	1
ZNF41	Amp_17q12	0.899	1
ANGPT4	Amp_13q34	0.899	1
ATHL1	Amp_13q34	0.899	1
C15orf39	8q-Amp	0.899	1
DOCK11	5p-Amp	0.899	1
DOCK11	Amp_6q21	0.899	1
FRMPD2	Del_7p22.3	0.899	1
KDM6A	17q-Del	0.899	1
TGS1	Amp_3p25.1	0.899	1
TGS1	Del_7p22.3	0.899	1
TNRC6B	15q-Del	0.899	1
TPP2	8q-Amp	0.899	1
USP36	8q-Amp	0.899	1
5p-Amp	Del_9p21.3	0.899	1
8p-Amp	18q-Del	0.899	1
18p-Del	6q-Del	0.899	1
Amp_3q26.32	Amp_8p11.21	0.899	1
Amp_19p13.12	Del_6p25.3	0.899	1
AARS	Del_17q21.31	0.9	1
ACTL6B	CDKN1B	0.9	1
ACTL6B	PTPN22	0.9	1
ACTL6B	TBL1XR1	0.9	1
ACTL6B	ANGPT4	0.9	1
ACTL6B	ATHL1	0.9	1
CDKN1B	PRICKLE3	0.9	1
CDKN1B	ANGPT4	0.9	1
CDKN1B	ATHL1	0.9	1
CDKN1B	1q-Del	0.9	1
EPDR1	ERBB2	0.9	1
EPDR1	DOCK11	0.9	1
ERBB2	DLX6	0.9	1
ERBB2	FBXO17	0.9	1
ERBB2	FXYD5	0.9	1
ERBB2	AKT2	0.9	1
ERBB2	MKL1	0.9	1
ERBB2	NBPF9	0.9	1
ERBB2	1q-Amp	0.9	1
NCOR1	RUNX1	0.9	1
PIK3R1	PTEN	0.9	1
PTEN	ABCA8	0.9	1
PTPN22	TBL1XR1	0.9	1
PTPN22	PRICKLE3	0.9	1
PTPN22	ANGPT4	0.9	1
PTPN22	1q-Del	0.9	1
RUNX1	Amp_4q13.3	0.9	1
SMAD2	Amp_17q12	0.9	1
SMAD2	Del_11q23.3	0.9	1
SMAD4	Del_11q23.3	0.9	1
TBL1XR1	PRICKLE3	0.9	1
TBL1XR1	ANGPT4	0.9	1
TBL1XR1	ATHL1	0.9	1
TBL1XR1	1q-Del	0.9	1
WSCD2	Amp_6p23	0.9	1
ZFP36L1	Del_17q21.31	0.9	1
DNAH12	Del_15q13.1	0.9	1
DST	Del_11p15.5	0.9	1
FBXO17	DOCK11	0.9	1
FXYD5	DOCK11	0.9	1
NFE2L3	Del_17q21.31	0.9	1
PRICKLE3	ANGPT4	0.9	1
PRICKLE3	ATHL1	0.9	1
PRICKLE3	1q-Del	0.9	1
SHISA4	DOCK11	0.9	1
AKT2	DOCK11	0.9	1
ANGPT4	ATHL1	0.9	1
ANGPT4	1q-Del	0.9	1
ATHL1	1q-Del	0.9	1
CDC42EP1	DOCK11	0.9	1
CEP57	Amp_20q13.2	0.9	1
DOCK11	MKL1	0.9	1
DOCK11	NBPF9	0.9	1
MR1	Amp_17q12	0.9	1
MUC6	Del_2q37.3	0.9	1
RBMX	Del_2q37.3	0.9	1
TARBP2	Amp_20q13.2	0.9	1
TFE3	Amp_17q12	0.9	1
20q-Amp	Amp_3p25.1	0.9	1
5p-Amp	5q-Del	0.9	1
8p-Amp	Del_12q24.31	0.9	1
8q-Amp	11p-Del	0.9	1
13q-Del	Amp_11p13	0.9	1
Amp_3p25.1	Amp_11p13	0.9	1
Amp_3p25.1	Amp_19q13.42	0.9	1
Amp_8p11.23	Del_17p12	0.9	1
Amp_8q24.21	Del_9q21.11	0.9	1
Amp_11p13	Del_7p22.3	0.9	1
Amp_11q14.1	Del_7p22.3	0.9	1
Amp_13q34	Amp_17q23.1	0.9	1
Amp_17q12	Del_11p15.5	0.9	1
AARS	GPS2	0.901	1
AARS	HIST1H3B	0.901	1
AARS	THEM5	0.901	1
AARS	GPRIN2	0.901	1
AARS	ZNF41	0.901	1
AARS	FGFR2	0.901	1
AARS	ZNF687	0.901	1
ARID1A	ERBB2	0.901	1
CDH1	RPGR	0.901	1
FBXW7	Del_12p13.1	0.901	1
GPS2	VCPIP1	0.901	1
GPS2	ZFP36L1	0.901	1
GPS2	EIF4A2	0.901	1
GPS2	KCNN3	0.901	1
HIST1H2BC	8p-Del	0.901	1
HIST1H3B	ZFP36L1	0.901	1
HIST1H3B	HLA-C	0.901	1
HIST1H3B	NFE2L3	0.901	1
HIST1H3B	EIF4A2	0.901	1
HIST1H3B	KCNN3	0.901	1
TBX3	Amp_11q13.3	0.901	1
THEM5	VCPIP1	0.901	1
THEM5	ZFP36L1	0.901	1
THEM5	HLA-C	0.901	1
THEM5	NFE2L3	0.901	1
THEM5	EIF4A2	0.901	1
THEM5	KCNN3	0.901	1
VCPIP1	ZNF41	0.901	1
VCPIP1	FGFR2	0.901	1
VCPIP1	IRS4	0.901	1
VCPIP1	ZNF687	0.901	1
ZFP36L1	GPRIN2	0.901	1
ZFP36L1	PPEF1	0.901	1
ZFP36L1	ZNF41	0.901	1
ZFP36L1	IRS4	0.901	1
ZFP36L1	ZNF687	0.901	1
DLX6	Amp_1q44	0.901	1
FBXO17	Amp_1q44	0.901	1
GPRIN2	NFE2L3	0.901	1
GPRIN2	EIF4A2	0.901	1
GPRIN2	KCNN3	0.901	1
GYG2	11q-Del	0.901	1
HLA-C	ZNF41	0.901	1
HLA-C	FGFR2	0.901	1
NFE2L3	ZNF41	0.901	1
NFE2L3	FGFR2	0.901	1
NFE2L3	IRS4	0.901	1
NFE2L3	ZNF687	0.901	1
PPEF1	KCNN3	0.901	1
PPEF1	Amp_3q26.32	0.901	1
ZNF41	EIF4A2	0.901	1
ZNF41	KCNN3	0.901	1
AKT2	Amp_1q44	0.901	1
CABYR	8p-Del	0.901	1
CXCR3	8p-Del	0.901	1
DOCK11	NF1	0.901	1
EIF4A2	FGFR2	0.901	1
EIF4A2	ZNF687	0.901	1
FGFR2	Amp_3q26.32	0.901	1
IRS4	KCNN3	0.901	1
KCNN3	ZNF687	0.901	1
MED23	Del_18q23	0.901	1
MKL1	Amp_1q44	0.901	1
NBPF9	Amp_1q44	0.901	1
SLC35B2	11q-Del	0.901	1
TCP11	8p-Del	0.901	1
TPP2	11q-Del	0.901	1
ZMYM3	Del_18q23	0.901	1
8p-Amp	Amp_1q44	0.901	1
11p-Del	Amp_1p22.3	0.901	1
16q-Del	Del_20p13	0.901	1
Amp_1p22.3	Del_9q34.2	0.901	1
C1QTNF5	ATXN2	0.902	1
C1QTNF5	MED23	0.902	1
C1QTNF5	MUC6	0.902	1
C1QTNF5	RBMX	0.902	1
C1QTNF5	ZMYM3	0.902	1
PTHLH	ATXN2	0.902	1
PTHLH	MED23	0.902	1
PTHLH	MUC6	0.902	1
PTHLH	ZMYM3	0.902	1
SMAD2	ATXN2	0.902	1
SMAD2	MED23	0.902	1
SMAD2	MUC6	0.902	1
SMAD4	MED23	0.902	1
SMAD4	RBMX	0.902	1
SMAD4	ZMYM3	0.902	1
ZFP36L2	ATXN2	0.902	1
ZFP36L2	MED23	0.902	1
ZFP36L2	MUC6	0.902	1
ZFP36L2	RBMX	0.902	1
ZFP36L2	ZMYM3	0.902	1
ZFP36L2	Del_6p25.3	0.902	1
ABCA8	Del_19p13.3	0.902	1
ATXN2	OR4D10	0.902	1
ATXN2	ANKRD20A4	0.902	1
ATXN7L1	MED23	0.902	1
ATXN7L1	ZMYM3	0.902	1
ATXN7L1	Del_6p25.3	0.902	1
CCNL2	ZMYM3	0.902	1
FBXO17	16p-Amp	0.902	1
GYG2	Del_8p23.2	0.902	1
OR4D10	MED23	0.902	1
OR4D10	MUC6	0.902	1
OR4D10	Del_6p25.3	0.902	1
PRICKLE3	Amp_17q23.1	0.902	1
AKT2	16p-Amp	0.902	1
ANGPT4	Amp_17q23.1	0.902	1
ANKRD20A4	MED23	0.902	1
ANKRD20A4	MUC6	0.902	1
ANKRD20A4	RBMX	0.902	1
ANKRD20A4	ZMYM3	0.902	1
ATHL1	Amp_17q23.1	0.902	1
BCORL1	Del_19p13.3	0.902	1
DOCK11	Del_9p23	0.902	1
MED23	MR1	0.902	1
MR1	Del_6p25.3	0.902	1
MUC6	TFE3	0.902	1
NBPF9	16p-Amp	0.902	1
RBMX	TFE3	0.902	1
SPEN	16p-Del	0.902	1
TPP2	Del_8p23.2	0.902	1
USP36	Del_8p23.2	0.902	1
1q-Del	Amp_17q23.1	0.902	1
Amp_1q21.3	Del_5q11.2	0.902	1
Amp_13q34	Del_19p13.3	0.902	1
ARID1A	8p-Amp	0.903	1
ASB10	15q-Del	0.903	1
ASB10	9q-Del	0.903	1
ASB10	Del_20p13	0.903	1
CBFB	Del_6p25.3	0.903	1
FAM86B1	9q-Del	0.903	1
FAM86B1	Del_20p13	0.903	1
MAP2K4	SDC1	0.903	1
MAP3K1	5p-Amp	0.903	1
RB1	TBX3	0.903	1
SF3B1	Amp_12q15	0.903	1
TCP10	15q-Del	0.903	1
THEM5	Amp_1p22.3	0.903	1
TP53	MUC6	0.903	1
ZFP36L2	16q-Del	0.903	1
COL6A5	Del_22q13.32	0.903	1
DNAH12	Amp_12q15	0.903	1
GRHL2	15q-Del	0.903	1
GRHL2	9q-Del	0.903	1
GYG2	15q-Del	0.903	1
GYG2	9q-Del	0.903	1
HRNR	Amp_3q26.32	0.903	1
ICOSLG	20p-Amp	0.903	1
MYH9	Del_7q36.1	0.903	1
PPEF1	Amp_1p22.3	0.903	1
WDR52	Amp_12q15	0.903	1
WDR52	Del_7q36.1	0.903	1
ZNF41	Amp_1p22.3	0.903	1
C15orf39	15q-Del	0.903	1
CABYR	20p-Amp	0.903	1
IRS4	Amp_1p22.3	0.903	1
MUC6	Del_9q34.2	0.903	1
NF1	18q-Del	0.903	1
PSIP1	Del_20p13	0.903	1
SLC35B2	15q-Del	0.903	1
SLC35B2	9q-Del	0.903	1
SLC35B2	Del_20p13	0.903	1
TCP11	20p-Amp	0.903	1
TPP2	9q-Del	0.903	1
USP36	9q-Del	0.903	1
USP36	Del_20p13	0.903	1
ZNF687	Amp_1p22.3	0.903	1
17q-Amp	Del_7p22.3	0.903	1
5p-Amp	Del_9q21.11	0.903	1
Amp_1q44	Amp_6q21	0.903	1
Amp_3p25.1	Amp_4q13.3	0.903	1
Amp_4q13.3	Del_7p22.3	0.903	1
Amp_6q21	Del_9q21.11	0.903	1
Amp_11p13	Amp_12p13.33	0.903	1
Amp_14q21.1	Amp_15q26.3	0.903	1
Amp_14q21.1	Del_17p12	0.903	1
Amp_20q13.2	Del_6p25.3	0.903	1
APC	AQP12A	0.904	1
APC	HIST1H2BC	0.904	1
APC	MAP2K4	0.904	1
APC	MLC1	0.904	1
APC	CCDC82	0.904	1
APC	CEP57	0.904	1
APC	CXCR3	0.904	1
APC	TCP11	0.904	1
AQP12A	SF3B1	0.904	1
AQP12A	DNAH12	0.904	1
AQP12A	MYH9	0.904	1
AQP12A	WDR52	0.904	1
AQP12A	KDM6A	0.904	1
ASB10	CASP8	0.904	1
ASB10	MYB	0.904	1
ASB10	FHOD3	0.904	1
ASB10	UBC	0.904	1
ASB10	FRMPD2	0.904	1
ASB10	TGS1	0.904	1
CASP8	FAM86B1	0.904	1
CASP8	TCP10	0.904	1
CASP8	GRHL2	0.904	1
CASP8	MORN1	0.904	1
CASP8	C15orf39	0.904	1
CASP8	PSIP1	0.904	1
CASP8	TPP2	0.904	1
CASP8	USP36	0.904	1
CDKN1B	Del_4q35.1	0.904	1
CTCF	SPEN	0.904	1
EPDR1	20q-Amp	0.904	1
EPDR1	Amp_11q14.1	0.904	1
FAM20C	COL6A5	0.904	1
FAM86B1	MYB	0.904	1
FAM86B1	FHOD3	0.904	1
FAM86B1	UBC	0.904	1
FAM86B1	FRMPD2	0.904	1
FAM86B1	TGS1	0.904	1
GATA3	AKD1	0.904	1
HIST1H2BC	SF3B1	0.904	1
HIST1H2BC	DNAH12	0.904	1
HIST1H2BC	MYH9	0.904	1
HIST1H2BC	WDR52	0.904	1
HIST1H2BC	KDM6A	0.904	1
HLA-DRB5	COL6A5	0.904	1
KRAS	SF3B1	0.904	1
KRAS	MYH9	0.904	1
KRAS	KDM6A	0.904	1
MAP2K4	KDM6A	0.904	1
MAP2K4	Amp_8p11.21	0.904	1
MYB	TCP10	0.904	1
MYB	GRHL2	0.904	1
MYB	GYG2	0.904	1
MYB	MORN1	0.904	1
MYB	C15orf39	0.904	1
MYB	PSIP1	0.904	1
MYB	TPP2	0.904	1
MYB	USP36	0.904	1
PIWIL1	SPEN	0.904	1
RAB42	COL6A5	0.904	1
RPGR	7q-Amp	0.904	1
SF3B1	ICOSLG	0.904	1
SF3B1	MLC1	0.904	1
SF3B1	CABYR	0.904	1
SF3B1	CCDC82	0.904	1
SF3B1	CEP57	0.904	1
SF3B1	CXCR3	0.904	1
SF3B1	RHOA	0.904	1
SF3B1	TARBP2	0.904	1
SF3B1	TCP11	0.904	1
TBL1XR1	Del_4q35.1	0.904	1
TBX3	16q-Del	0.904	1
TCP10	FHOD3	0.904	1
TCP10	UBC	0.904	1
TCP10	TGS1	0.904	1
ABCA8	DST	0.904	1
CCL13	COL6A5	0.904	1
COL6A5	OR2T35	0.904	1
COL6A5	OXCT2	0.904	1
COL6A5	PAX2	0.904	1
COL6A5	TTPAL	0.904	1
COL6A5	ZBTB7C	0.904	1
COL6A5	ZNF362	0.904	1
DLX6	20q-Amp	0.904	1
DNAH12	ICOSLG	0.904	1
DNAH12	MLC1	0.904	1
DNAH12	OR6C76	0.904	1
DNAH12	CABYR	0.904	1
DNAH12	CCDC82	0.904	1
DNAH12	CXCR3	0.904	1
DNAH12	TCP11	0.904	1
FBXO17	20q-Amp	0.904	1
FHOD3	GRHL2	0.904	1
FHOD3	GYG2	0.904	1
FHOD3	MORN1	0.904	1
FHOD3	SLC35B2	0.904	1
FHOD3	TPP2	0.904	1
FHOD3	USP36	0.904	1
FXYD5	Amp_11q14.1	0.904	1
GRHL2	UBC	0.904	1
GRHL2	FRMPD2	0.904	1
GRHL2	TGS1	0.904	1
ICOSLG	WDR52	0.904	1
ICOSLG	KDM6A	0.904	1
MLC1	MYH9	0.904	1
MLC1	WDR52	0.904	1
MLC1	KDM6A	0.904	1
MYH9	CABYR	0.904	1
MYH9	CCDC82	0.904	1
MYH9	CEP57	0.904	1
MYH9	CXCR3	0.904	1
MYH9	RHOA	0.904	1
MYH9	TARBP2	0.904	1
SHISA4	20q-Amp	0.904	1
UBC	C15orf39	0.904	1
UBC	SLC35B2	0.904	1
WDR52	CEP57	0.904	1
AKT2	20q-Amp	0.904	1
ATHL1	Del_4q35.1	0.904	1
CABYR	KDM6A	0.904	1
CDC42EP1	Amp_11q14.1	0.904	1
CEP57	KDM6A	0.904	1
CXCR3	KDM6A	0.904	1
FRMPD2	PSIP1	0.904	1
FRMPD2	SLC35B2	0.904	1
FRMPD2	USP36	0.904	1
KDM6A	TARBP2	0.904	1
MKL1	20q-Amp	0.904	1
MKL1	Amp_11q14.1	0.904	1
NBPF9	20q-Amp	0.904	1
SLC35B2	TGS1	0.904	1
TGS1	TPP2	0.904	1
TGS1	USP36	0.904	1
TNRC6B	7q-Amp	0.904	1
ZMYM3	Del_17q21.31	0.904	1
7p-Amp	17q-Del	0.904	1
7p-Amp	Del_6q15	0.904	1
11q-Del	Amp_1q21.3	0.904	1
18q-Del	Amp_3q26.32	0.904	1
Amp_4q13.3	Amp_10p15.1	0.904	1
RB1	DLX6	0.905	1
RB1	FBXO17	0.905	1
RB1	FXYD5	0.905	1
RB1	SHISA4	0.905	1
RB1	MKL1	0.905	1
RB1	NBPF9	0.905	1
MLC1	Del_5q21.3	0.905	1
CCDC82	Del_5q21.3	0.905	1
CEP57	Del_5q21.3	0.905	1
IRS4	Amp_10p15.1	0.905	1
KCNN3	5q-Del	0.905	1
PCNXL2	Amp_14q21.1	0.905	1
TARBP2	Del_5q21.3	0.905	1
ZNF687	Amp_10p15.1	0.905	1
Amp_1q44	Del_7p22.3	0.905	1
Amp_13q34	Del_1p36.13	0.905	1
ACTL6B	1p-Del	0.906	1
EPDR1	8q-Amp	0.906	1
MLL3	MYH9	0.906	1
NCOR1	WSCD2	0.906	1
NCOR1	DLG1	0.906	1
PIK3CA	AKD1	0.906	1
PTPN22	Amp_14q21.1	0.906	1
WSCD2	17q-Amp	0.906	1
ZFP36L1	Del_9p23	0.906	1
COL6A5	Amp_1p22.3	0.906	1
DLX6	8q-Amp	0.906	1
HRNR	SDC1	0.906	1
SHISA4	8q-Amp	0.906	1
AKT2	8q-Amp	0.906	1
CASZ1	17q-Amp	0.906	1
KCNN3	Del_9p23	0.906	1
MLL4	Amp_4q13.3	0.906	1
NBPF9	8q-Amp	0.906	1
NF1	Amp_17q23.1	0.906	1
SDC1	22q-Del	0.906	1
TNRC6B	Del_3p21.31	0.906	1
22q-Del	Amp_15q26.3	0.906	1
4q-Del	Amp_17q23.1	0.906	1
5q-Del	Del_9p23	0.906	1
Amp_3p25.1	Del_5q21.3	0.906	1
Del_7p22.3	Del_22q13.32	0.906	1
C1QTNF5	Del_12p13.1	0.907	1
FBXW7	Del_14q24.1	0.907	1
FOXA1	Del_19q13.32	0.907	1
GATA3	20q-Amp	0.907	1
HIST1H2BC	PIK3CA	0.907	1
HIST1H3B	Del_19q13.32	0.907	1
PIK3CA	ICOSLG	0.907	1
PIK3CA	CEP57	0.907	1
PIWIL1	Amp_3q26.32	0.907	1
TAF1L	Amp_3q26.32	0.907	1
THEM5	Del_19q13.32	0.907	1
ANKRD12	Amp_3q26.32	0.907	1
FBXO17	Del_5q11.2	0.907	1
FHOD3	Amp_19p13.12	0.907	1
FXYD5	Del_4p16.3	0.907	1
FXYD5	Del_5q11.2	0.907	1
PPEF1	Del_19q13.32	0.907	1
UBC	Amp_19p13.12	0.907	1
ANKRD20A4	Del_12p13.1	0.907	1
BCORL1	Del_11p15.5	0.907	1
DOCK11	Amp_13q34	0.907	1
MED23	16p-Del	0.907	1
MKL1	Del_4p16.3	0.907	1
MR1	Del_12p13.1	0.907	1
TFE3	Del_12p13.1	0.907	1
ZMYM3	16p-Del	0.907	1
11q-Del	Amp_19q13.42	0.907	1
13q-Del	Amp_12p13.33	0.907	1
Amp_3p25.1	Del_9q21.11	0.907	1
Amp_8p11.23	Del_7p22.3	0.907	1
Amp_19p13.12	Del_1p36.13	0.907	1
Del_1p22.1	Del_6p25.3	0.907	1
CBFB	FAM20C	0.908	1
CBFB	HLA-DRB5	0.908	1
CBFB	RAB42	0.908	1
CBFB	OR2T35	0.908	1
CBFB	XBP1	0.908	1
CBFB	PAX2	0.908	1
CBFB	RHBG	0.908	1
CBFB	TTPAL	0.908	1
CBFB	ZBTB7C	0.908	1
CBFB	ZNF362	0.908	1
CDH1	EPDR1	0.908	1
CDH1	FBXO17	0.908	1
CDH1	SHISA4	0.908	1
CDH1	MKL1	0.908	1
FAM20C	FOXA1	0.908	1
FOXA1	HLA-DRB5	0.908	1
FOXA1	RAB42	0.908	1
FOXA1	CCL13	0.908	1
FOXA1	OR2T35	0.908	1
FOXA1	OXCT2	0.908	1
FOXA1	PAX2	0.908	1
FOXA1	RIBC1	0.908	1
FOXA1	TTPAL	0.908	1
FOXA1	ZBTB7C	0.908	1
FOXA1	ZNF362	0.908	1
MAP3K1	22q-Del	0.908	1
MLL3	Amp_12q15	0.908	1
NCOR1	Del_2q37.3	0.908	1
PIK3CA	WSCD2	0.908	1
PTHLH	13q-Del	0.908	1
SMAD2	13q-Del	0.908	1
TCP10	17p-Del	0.908	1
DLX6	Amp_1q21.3	0.908	1
DST	HRNR	0.908	1
ICOSLG	Amp_6p23	0.908	1
MLC1	Amp_6p23	0.908	1
MORN1	17p-Del	0.908	1
SPRR2B	Amp_17q23.1	0.908	1
AKT2	Amp_1q21.3	0.908	1
BCORL1	4q-Del	0.908	1
CCDC82	Amp_6p23	0.908	1
CXCR3	Amp_6p23	0.908	1
MED23	Del_17p12	0.908	1
MKL1	Del_1p22.1	0.908	1
NBPF9	Amp_1q21.3	0.908	1
NBPF9	Del_1p22.1	0.908	1
NF1	Del_20p13	0.908	1
TCP11	Amp_6p23	0.908	1
USP36	17p-Del	0.908	1
5p-Amp	Del_8p23.2	0.908	1
Amp_11p13	Del_8p23.2	0.908	1
Amp_12p13.33	Del_9p23	0.908	1
ACTL6B	Del_12q24.31	0.909	1
C1QTNF5	WSCD2	0.909	1
C1QTNF5	CASZ1	0.909	1
C1QTNF5	DLG1	0.909	1
C1QTNF5	MLL4	0.909	1
CDKN1B	Del_12q24.31	0.909	1
FOXA1	Amp_1q21.3	0.909	1
MLL3	Del_11p15.5	0.909	1
PIWIL1	Amp_1p22.3	0.909	1
PTHLH	WSCD2	0.909	1
PTHLH	CASZ1	0.909	1
PTHLH	DLG1	0.909	1
PTHLH	MLL4	0.909	1
PTPN22	Del_12q23.1	0.909	1
PTPN22	Del_12q24.31	0.909	1
RB1	NF1	0.909	1
SMAD2	WSCD2	0.909	1
SMAD2	DLG1	0.909	1
SMAD2	MLL4	0.909	1
SMAD4	WSCD2	0.909	1
SMAD4	DLG1	0.909	1
TBL1XR1	Del_12q23.1	0.909	1
TBL1XR1	Del_12q24.31	0.909	1
VCPIP1	1q-Amp	0.909	1
WSCD2	ZFP36L2	0.909	1
WSCD2	ATXN7L1	0.909	1
WSCD2	CCNL2	0.909	1
WSCD2	OR4D10	0.909	1
WSCD2	ANKRD20A4	0.909	1
WSCD2	MR1	0.909	1
WSCD2	TFE3	0.909	1
ZFP36L1	1q-Amp	0.909	1
ZFP36L2	CASZ1	0.909	1
ZFP36L2	DLG1	0.909	1
ZFP36L2	MLL4	0.909	1
ATXN7L1	DLG1	0.909	1
CCNL2	DLG1	0.909	1
HLA-C	Del_22q13.32	0.909	1
HRNR	WDR52	0.909	1
HRNR	KDM6A	0.909	1
OR4D10	DLG1	0.909	1
OR4D10	MLL4	0.909	1
PRICKLE3	Del_12q23.1	0.909	1
SPRR2B	7q-Amp	0.909	1
ANKRD20A4	CASZ1	0.909	1
ANKRD20A4	DLG1	0.909	1
ANKRD20A4	MLL4	0.909	1
CASZ1	TFE3	0.909	1
DLG1	TFE3	0.909	1
KCNN3	Del_22q13.32	0.909	1
PCNXL2	Del_12q23.1	0.909	1
SDC1	SPEN	0.909	1
SDC1	7q-Amp	0.909	1
20p-Amp	Amp_11q14.1	0.909	1
5p-Amp	14q-Del	0.909	1
17q-Del	Amp_11p13	0.909	1
17q-Del	Amp_19q13.42	0.909	1
Amp_11p13	Del_21q11.2	0.909	1
Del_6q27	Del_19q13.32	0.909	1
AARS	ACTL6B	0.91	1
AARS	CDKN1B	0.91	1
AARS	TBL1XR1	0.91	1
AARS	PRICKLE3	0.91	1
AARS	1q-Del	0.91	1
ACTL6B	VCPIP1	0.91	1
ACTL6B	ZFP36L1	0.91	1
ACTL6B	HLA-C	0.91	1
ACTL6B	NFE2L3	0.91	1
ACTL6B	EIF4A2	0.91	1
ACTL6B	KCNN3	0.91	1
AQP12A	FBXW7	0.91	1
AQP12A	ABCA8	0.91	1
AQP12A	BCORL1	0.91	1
CBFB	Del_1p22.1	0.91	1
CDKN1B	ZFP36L1	0.91	1
CDKN1B	NFE2L3	0.91	1
CDKN1B	KCNN3	0.91	1
EPDR1	AKD1	0.91	1
FBXW7	HIST1H2BC	0.91	1
FBXW7	ICOSLG	0.91	1
FBXW7	MLC1	0.91	1
FBXW7	CABYR	0.91	1
FBXW7	CCDC82	0.91	1
FBXW7	CEP57	0.91	1
FBXW7	CXCR3	0.91	1
FBXW7	RHOA	0.91	1
FBXW7	TARBP2	0.91	1
FBXW7	TCP11	0.91	1
FOXA1	Del_1p22.1	0.91	1
HIST1H2BC	PIK3R1	0.91	1
HIST1H2BC	ABCA8	0.91	1
HIST1H2BC	BCORL1	0.91	1
HIST1H3B	Del_10q23.31	0.91	1
KRAS	ABCA8	0.91	1
KRAS	BCORL1	0.91	1
PIK3R1	OR6C76	0.91	1
PIK3R1	CABYR	0.91	1
PIK3R1	CEP57	0.91	1
PIK3R1	CXCR3	0.91	1
PIK3R1	RHOA	0.91	1
PIK3R1	TARBP2	0.91	1
PIK3R1	TCP11	0.91	1
PTPN22	ZFP36L1	0.91	1
PTPN22	HLA-C	0.91	1
PTPN22	KCNN3	0.91	1
TBL1XR1	VCPIP1	0.91	1
TBL1XR1	ZFP36L1	0.91	1
TBL1XR1	HLA-C	0.91	1
TBL1XR1	NFE2L3	0.91	1
TBL1XR1	KCNN3	0.91	1
THEM5	13q-Del	0.91	1
THEM5	Del_10q23.31	0.91	1
VCPIP1	PRICKLE3	0.91	1
VCPIP1	ATHL1	0.91	1
VCPIP1	1q-Del	0.91	1
ZFP36L1	PRICKLE3	0.91	1
ZFP36L1	1q-Del	0.91	1
ZFP36L1	Amp_8p11.21	0.91	1
ABCA8	MLC1	0.91	1
ABCA8	OR6C76	0.91	1
ABCA8	CABYR	0.91	1
ABCA8	CEP57	0.91	1
ABCA8	CXCR3	0.91	1
ABCA8	RHOA	0.91	1
ABCA8	TARBP2	0.91	1
ABCA8	TCP11	0.91	1
AKD1	DLX6	0.91	1
AKD1	FXYD5	0.91	1
AKD1	SHISA4	0.91	1
AKD1	AKT2	0.91	1
HLA-C	PRICKLE3	0.91	1
HLA-C	ANGPT4	0.91	1
HLA-C	1q-Del	0.91	1
ICOSLG	BCORL1	0.91	1
NFE2L3	PRICKLE3	0.91	1
NFE2L3	ANGPT4	0.91	1
NFE2L3	1q-Del	0.91	1
PPEF1	13q-Del	0.91	1
PPEF1	Del_10q23.31	0.91	1
PRICKLE3	KCNN3	0.91	1
PRICKLE3	16p-Amp	0.91	1
ZNF41	Del_10q23.31	0.91	1
ANGPT4	EIF4A2	0.91	1
ANGPT4	KCNN3	0.91	1
ATHL1	KCNN3	0.91	1
ATHL1	16p-Amp	0.91	1
BCORL1	CABYR	0.91	1
BCORL1	CCDC82	0.91	1
BCORL1	CEP57	0.91	1
BCORL1	CXCR3	0.91	1
BCORL1	TARBP2	0.91	1
BCORL1	TCP11	0.91	1
EIF4A2	1q-Del	0.91	1
IRS4	7p-Amp	0.91	1
MUC6	Del_9p23	0.91	1
ZNF687	7p-Amp	0.91	1
Amp_10p15.1	Del_19q13.32	0.91	1
APC	Amp_11q14.1	0.911	1
FBXW7	16q-Del	0.911	1
HIST1H3B	17p-Del	0.911	1
MAP3K1	ABCA8	0.911	1
MLL3	PTEN	0.911	1
PIK3R1	16q-Del	0.911	1
PIK3R1	Del_9q21.11	0.911	1
PTEN	RBMX	0.911	1
PTHLH	4q-Del	0.911	1
PTHLH	Del_6q15	0.911	1
RB1	5p-Amp	0.911	1
RB1	Amp_11p13	0.911	1
RB1	Amp_19q13.42	0.911	1
SF3B1	Amp_11q14.1	0.911	1
SMAD2	4q-Del	0.911	1
SMAD4	4q-Del	0.911	1
VCPIP1	5p-Amp	0.911	1
VCPIP1	Amp_6q21	0.911	1
ZFP36L1	Amp_6q21	0.911	1
ZFP36L1	Amp_19q13.42	0.911	1
ZFP36L2	Del_6q15	0.911	1
ABCA8	16q-Del	0.911	1
ABCA8	Del_9q21.11	0.911	1
ANKRD12	11q-Del	0.911	1
CCNL2	4q-Del	0.911	1
CCNL2	Del_6q15	0.911	1
DNAH12	Amp_11q14.1	0.911	1
DNAH12	Del_16q24.3	0.911	1
HLA-C	Amp_6q21	0.911	1
HLA-C	Amp_19q13.42	0.911	1
MYH9	Del_16q24.3	0.911	1
NFE2L3	Amp_11p13	0.911	1
NFE2L3	Amp_19q13.42	0.911	1
WDR52	20q-Amp	0.911	1
ZNF41	17p-Del	0.911	1
ANKRD20A4	4q-Del	0.911	1
FRMPD2	20p-Amp	0.911	1
KCNN3	Amp_6q21	0.911	1
MED23	Del_6p25.3	0.911	1
MR1	4q-Del	0.911	1
TFE3	4q-Del	0.911	1
TGS1	20p-Amp	0.911	1
20p-Amp	Del_9q34.2	0.911	1
1p-Del	Del_5q11.2	0.911	1
Amp_3q26.32	Del_7q36.1	0.911	1
APC	Del_20p13	0.912	1
ASB10	GPS2	0.912	1
ASB10	HIST1H3B	0.912	1
ASB10	THEM5	0.912	1
ASB10	GPRIN2	0.912	1
ASB10	PPEF1	0.912	1
ASB10	ZNF41	0.912	1
ASB10	FGFR2	0.912	1
ASB10	IRS4	0.912	1
ASB10	ZNF687	0.912	1
CASP8	Del_9p21.3	0.912	1
EPDR1	Amp_3q26.32	0.912	1
FAM86B1	GPS2	0.912	1
FAM86B1	HIST1H3B	0.912	1
FAM86B1	THEM5	0.912	1
FAM86B1	GPRIN2	0.912	1
FAM86B1	PPEF1	0.912	1
FAM86B1	ZNF41	0.912	1
FAM86B1	FGFR2	0.912	1
FAM86B1	IRS4	0.912	1
FAM86B1	ZNF687	0.912	1
GATA3	HIST1H3B	0.912	1
GATA3	ZNF687	0.912	1
GPS2	GRHL2	0.912	1
GPS2	MORN1	0.912	1
GPS2	C15orf39	0.912	1
GPS2	PSIP1	0.912	1
GPS2	SLC35B2	0.912	1
GPS2	USP36	0.912	1
HIST1H3B	TCP10	0.912	1
HIST1H3B	GRHL2	0.912	1
HIST1H3B	GYG2	0.912	1
HIST1H3B	C15orf39	0.912	1
HIST1H3B	PSIP1	0.912	1
HIST1H3B	TPP2	0.912	1
HIST1H3B	USP36	0.912	1
PIWIL1	Del_8p23.2	0.912	1
RB1	Amp_17q12	0.912	1
TBL1XR1	Amp_11q14.1	0.912	1
TCP10	THEM5	0.912	1
TCP10	PPEF1	0.912	1
TCP10	ZNF41	0.912	1
TCP10	FGFR2	0.912	1
TCP10	IRS4	0.912	1
TCP10	ZNF687	0.912	1
THEM5	GRHL2	0.912	1
THEM5	GYG2	0.912	1
THEM5	MORN1	0.912	1
THEM5	C15orf39	0.912	1
THEM5	PSIP1	0.912	1
THEM5	SLC35B2	0.912	1
THEM5	TPP2	0.912	1
THEM5	USP36	0.912	1
THEM5	Del_10q26.3	0.912	1
DLX6	Amp_3q26.32	0.912	1
FHOD3	Del_9p21.3	0.912	1
GPRIN2	MORN1	0.912	1
GPRIN2	C15orf39	0.912	1
GPRIN2	PSIP1	0.912	1
GPRIN2	SLC35B2	0.912	1
GPRIN2	USP36	0.912	1
GRHL2	ZNF41	0.912	1
GRHL2	FGFR2	0.912	1
GRHL2	IRS4	0.912	1
GRHL2	ZNF687	0.912	1
GYG2	ZNF41	0.912	1
GYG2	FGFR2	0.912	1
GYG2	IRS4	0.912	1
GYG2	ZNF687	0.912	1
GYG2	Del_13q14.2	0.912	1
MORN1	ZNF41	0.912	1
MORN1	FGFR2	0.912	1
MORN1	IRS4	0.912	1
MYH9	Del_20p13	0.912	1
PPEF1	SLC35B2	0.912	1
PPEF1	USP36	0.912	1
PRICKLE3	20q-Amp	0.912	1
ZNF41	C15orf39	0.912	1
ZNF41	SLC35B2	0.912	1
ZNF41	USP36	0.912	1
ZNF41	9p-Del	0.912	1
ANGPT4	20q-Amp	0.912	1
C15orf39	FGFR2	0.912	1
CDC42EP1	Amp_3q26.32	0.912	1
FGFR2	PSIP1	0.912	1
FGFR2	USP36	0.912	1
FGFR2	9p-Del	0.912	1
FRMPD2	Del_9p21.3	0.912	1
IRS4	PSIP1	0.912	1
IRS4	TPP2	0.912	1
IRS4	USP36	0.912	1
MKL1	Amp_3q26.32	0.912	1
NBPF9	Amp_3q26.32	0.912	1
PSIP1	ZNF687	0.912	1
SLC35B2	ZNF687	0.912	1
SLC35B2	Del_13q14.2	0.912	1
TGS1	Del_3p21.31	0.912	1
TNRC6B	Amp_10p15.1	0.912	1
TPP2	ZNF687	0.912	1
20q-Amp	1q-Del	0.912	1
Amp_3p25.1	Del_1p22.1	0.912	1
FOXA1	PCNXL2	0.913	1
PTPN22	Del_8p23.2	0.913	1
THEM5	Amp_3p25.1	0.913	1
ANKRD12	Amp_15q26.3	0.913	1
DLX6	Amp_1p22.3	0.913	1
FBXO17	Amp_1p22.3	0.913	1
GPRIN2	Amp_3p25.1	0.913	1
GRHL2	Amp_15q26.3	0.913	1
NFE2L3	Amp_20q13.2	0.913	1
PPEF1	Amp_3p25.1	0.913	1
SHISA4	17p-Del	0.913	1
ZNF41	Amp_3p25.1	0.913	1
AKT2	Amp_1p22.3	0.913	1
CDC42EP1	17p-Del	0.913	1
FGFR2	Amp_3p25.1	0.913	1
KCNN3	Amp_20q13.2	0.913	1
MKL1	Amp_1p22.3	0.913	1
NBPF9	Amp_1p22.3	0.913	1
TNRC6B	Amp_15q26.3	0.913	1
USP36	Amp_15q26.3	0.913	1
ZNF687	Amp_3p25.1	0.913	1
20q-Amp	Del_6q27	0.913	1
14q-Del	Amp_8p11.21	0.913	1
Amp_11q14.1	Del_6q27	0.913	1
APC	7q-Amp	0.914	1
C1QTNF5	Del_9q21.11	0.914	1
ERBB2	COL6A5	0.914	1
FAM20C	TP53	0.914	1
FBXW7	MAP2K4	0.914	1
MAP2K4	Del_16q24.3	0.914	1
MAP3K1	SMAD4	0.914	1
MAP3K1	ZFP36L2	0.914	1
MAP3K1	ATXN7L1	0.914	1
MAP3K1	CCNL2	0.914	1
MLL3	7p-Amp	0.914	1
SF3B1	7q-Amp	0.914	1
TP53	TTPAL	0.914	1
ZFP36L2	Del_9q21.11	0.914	1
ABCA8	14q-Del	0.914	1
AKD1	Amp_8p11.23	0.914	1
ATXN7L1	Del_9q21.11	0.914	1
CCNL2	Amp_12p13.33	0.914	1
CCNL2	Del_9q21.11	0.914	1
COL6A5	DOCK11	0.914	1
FHOD3	Amp_10q22.3	0.914	1
FHOD3	Del_5q21.3	0.914	1
WDR52	7q-Amp	0.914	1
BCORL1	14q-Del	0.914	1
FRMPD2	Amp_10q22.3	0.914	1
TFE3	Del_9q21.11	0.914	1
7q-Amp	Amp_6q21	0.914	1
14q-Del	Amp_1q21.3	0.914	1
5q-Del	Amp_11q14.1	0.914	1
Amp_15q26.3	Amp_20q13.2	0.914	1
CTCF	EPDR1	0.915	1
CTCF	RUNX1	0.915	1
CTCF	DLX6	0.915	1
CTCF	FBXO17	0.915	1
CTCF	FXYD5	0.915	1
CTCF	SHISA4	0.915	1
CTCF	AKT2	0.915	1
CTCF	CDC42EP1	0.915	1
CTCF	MKL1	0.915	1
CTCF	NBPF9	0.915	1
EPDR1	PIWIL1	0.915	1
EPDR1	TAF1L	0.915	1
EPDR1	ERBB3	0.915	1
EPDR1	TNRC6B	0.915	1
ERBB2	1p-Del	0.915	1
FAM20C	PCNXL2	0.915	1
FAM20C	Del_18q23	0.915	1
PIWIL1	DLX6	0.915	1
PIWIL1	FXYD5	0.915	1
PIWIL1	SHISA4	0.915	1
PIWIL1	AKT2	0.915	1
PIWIL1	CDC42EP1	0.915	1
PIWIL1	NBPF9	0.915	1
RAB42	PCNXL2	0.915	1
RPGR	DLX6	0.915	1
RPGR	FXYD5	0.915	1
RPGR	SHISA4	0.915	1
RPGR	AKT2	0.915	1
RPGR	CDC42EP1	0.915	1
RPGR	MKL1	0.915	1
RPGR	NBPF9	0.915	1
RUNX1	TAF1L	0.915	1
RUNX1	ANKRD12	0.915	1
RUNX1	SPRR2B	0.915	1
RUNX1	SDC1	0.915	1
RUNX1	TNRC6B	0.915	1
TAF1L	FXYD5	0.915	1
TAF1L	SHISA4	0.915	1
TAF1L	MKL1	0.915	1
TAF1L	NBPF9	0.915	1
THEM5	Del_13q14.2	0.915	1
VCPIP1	Del_19p13.3	0.915	1
ANKRD12	DLX6	0.915	1
ANKRD12	FBXO17	0.915	1
ANKRD12	SHISA4	0.915	1
ANKRD12	AKT2	0.915	1
ANKRD12	NBPF9	0.915	1
CCL13	PCNXL2	0.915	1
DLX6	ERBB3	0.915	1
DLX6	TNRC6B	0.915	1
DLX6	Amp_10p15.1	0.915	1
ERBB3	SHISA4	0.915	1
ERBB3	AKT2	0.915	1
ERBB3	CDC42EP1	0.915	1
ERBB3	NBPF9	0.915	1
FXYD5	Amp_10p15.1	0.915	1
HLA-C	8p-Del	0.915	1
HLA-C	Del_19p13.3	0.915	1
NFE2L3	8p-Del	0.915	1
OR2T35	PCNXL2	0.915	1
OR2T35	Del_18q23	0.915	1
WDR52	Del_5q11.2	0.915	1
ZNF41	Del_13q14.2	0.915	1
CDC42EP1	Amp_10p15.1	0.915	1
CEP57	22q-Del	0.915	1
EIF4A2	Del_19p13.3	0.915	1
FGFR2	Del_13q14.2	0.915	1
NBPF9	TNRC6B	0.915	1
OXCT2	PCNXL2	0.915	1
OXCT2	Del_18q23	0.915	1
PAX2	PCNXL2	0.915	1
PAX2	Del_18q23	0.915	1
PCNXL2	TTPAL	0.915	1
PCNXL2	ZBTB7C	0.915	1
PCNXL2	ZNF362	0.915	1
TTPAL	Del_18q23	0.915	1
ZBTB7C	Del_18q23	0.915	1
17q-Amp	Amp_19p13.12	0.915	1
16q-Del	Amp_11q13.3	0.915	1
Amp_6p23	Del_7p22.3	0.915	1
Amp_6q21	Amp_19p13.12	0.915	1
Amp_17q12	Amp_19p13.12	0.915	1
Amp_19q12	Del_20p13	0.915	1
ACTL6B	Del_4p16.3	0.916	1
ACTL6B	Del_5q11.2	0.916	1
AQP12A	ATXN2	0.916	1
AQP12A	MED23	0.916	1
AQP12A	RBMX	0.916	1
AQP12A	ZMYM3	0.916	1
C1QTNF5	FHOD3	0.916	1
C1QTNF5	UBC	0.916	1
C1QTNF5	FRMPD2	0.916	1
C1QTNF5	TGS1	0.916	1
C1QTNF5	Amp_19q12	0.916	1
C1QTNF5	Del_21q11.2	0.916	1
CASP8	PTHLH	0.916	1
CASP8	SMAD2	0.916	1
CASP8	SMAD4	0.916	1
CASP8	ZFP36L2	0.916	1
CASP8	ATXN7L1	0.916	1
CASP8	OR4D10	0.916	1
CASP8	ANKRD20A4	0.916	1
CASP8	MR1	0.916	1
CASP8	TFE3	0.916	1
EPDR1	Del_13q14.2	0.916	1
GATA3	17q-Amp	0.916	1
HIST1H2BC	ATXN2	0.916	1
HIST1H2BC	MED23	0.916	1
HIST1H2BC	MUC6	0.916	1
HIST1H2BC	RBMX	0.916	1
HIST1H2BC	ZMYM3	0.916	1
HIST1H3B	18p-Del	0.916	1
KRAS	ATXN2	0.916	1
KRAS	MED23	0.916	1
KRAS	MUC6	0.916	1
MYB	PTHLH	0.916	1
MYB	SMAD2	0.916	1
MYB	SMAD4	0.916	1
MYB	ZFP36L2	0.916	1
MYB	ATXN7L1	0.916	1
MYB	CCNL2	0.916	1
MYB	OR4D10	0.916	1
MYB	ANKRD20A4	0.916	1
MYB	TFE3	0.916	1
PTHLH	UBC	0.916	1
PTHLH	FRMPD2	0.916	1
PTHLH	TGS1	0.916	1
PTHLH	17q-Del	0.916	1
RB1	Del_5q21.3	0.916	1
SMAD2	UBC	0.916	1
SMAD2	TGS1	0.916	1
SMAD2	17q-Del	0.916	1
SMAD2	Del_21q11.2	0.916	1
SMAD4	FHOD3	0.916	1
SMAD4	FRMPD2	0.916	1
ZFP36L2	FHOD3	0.916	1
ZFP36L2	UBC	0.916	1
ZFP36L2	TGS1	0.916	1
ATXN2	ICOSLG	0.916	1
ATXN2	MLC1	0.916	1
ATXN2	CABYR	0.916	1
ATXN2	CXCR3	0.916	1
ATXN2	RHOA	0.916	1
ATXN2	TARBP2	0.916	1
ATXN2	TCP11	0.916	1
ATXN7L1	Amp_19q12	0.916	1
CCNL2	FRMPD2	0.916	1
CCNL2	14q-Del	0.916	1
CCNL2	Amp_19q12	0.916	1
DLX6	Del_13q14.2	0.916	1
DST	Del_6q15	0.916	1
FHOD3	ANKRD20A4	0.916	1
FHOD3	MR1	0.916	1
ICOSLG	MED23	0.916	1
ICOSLG	MUC6	0.916	1
ICOSLG	RBMX	0.916	1
ICOSLG	ZMYM3	0.916	1
MLC1	MED23	0.916	1
MLC1	MUC6	0.916	1
MLC1	RBMX	0.916	1
MLC1	ZMYM3	0.916	1
NFE2L3	Amp_13q34	0.916	1
OR4D10	UBC	0.916	1
OR4D10	TGS1	0.916	1
OR4D10	Amp_19q12	0.916	1
OR4D10	Del_21q11.2	0.916	1
OR6C76	MED23	0.916	1
OR6C76	MUC6	0.916	1
OR6C76	RBMX	0.916	1
PRICKLE3	Del_5q11.2	0.916	1
UBC	ANKRD20A4	0.916	1
UBC	TFE3	0.916	1
XBP1	Del_17q21.31	0.916	1
ANKRD20A4	FRMPD2	0.916	1
ANKRD20A4	TGS1	0.916	1
ATHL1	Del_4p16.3	0.916	1
CABYR	MED23	0.916	1
CABYR	MUC6	0.916	1
CABYR	RBMX	0.916	1
CABYR	ZMYM3	0.916	1
CCDC82	MED23	0.916	1
CCDC82	MUC6	0.916	1
CCDC82	RBMX	0.916	1
CEP57	MED23	0.916	1
CEP57	MUC6	0.916	1
CEP57	RBMX	0.916	1
CEP57	ZMYM3	0.916	1
CXCR3	MED23	0.916	1
CXCR3	MUC6	0.916	1
CXCR3	RBMX	0.916	1
CXCR3	ZMYM3	0.916	1
FRMPD2	TFE3	0.916	1
MED23	RHOA	0.916	1
MED23	TARBP2	0.916	1
MED23	TCP11	0.916	1
MLL4	Del_2q37.3	0.916	1
MUC6	RHOA	0.916	1
MUC6	TARBP2	0.916	1
MUC6	TCP11	0.916	1
NBPF9	Del_13q14.2	0.916	1
OXCT2	Del_17p12	0.916	1
RBMX	RHOA	0.916	1
RBMX	TARBP2	0.916	1
RBMX	TCP11	0.916	1
RHOA	ZMYM3	0.916	1
TARBP2	ZMYM3	0.916	1
TCP11	ZMYM3	0.916	1
TFE3	Del_21q11.2	0.916	1
ZMYM3	1q-Amp	0.916	1
ZMYM3	17p-Del	0.916	1
Amp_3p25.1	Del_6q15	0.916	1
Amp_4q13.3	Del_10q26.3	0.916	1
Amp_11q14.1	Del_5q21.3	0.916	1
AQP12A	Amp_17q23.1	0.917	1
PIK3R1	Del_7q36.1	0.917	1
ANKRD12	Del_10q23.31	0.917	1
COL6A5	Del_7q36.1	0.917	1
DST	Del_15q13.1	0.917	1
HRNR	Del_10q23.31	0.917	1
OR6C76	Amp_17q23.1	0.917	1
UBC	16q-Del	0.917	1
BCORL1	Del_7q36.1	0.917	1
CCDC82	Amp_17q23.1	0.917	1
CXCR3	Amp_17q23.1	0.917	1
TARBP2	Amp_17q23.1	0.917	1
5p-Amp	4p-Del	0.917	1
Amp_1q44	Del_12q24.31	0.917	1
Amp_1q44	Del_15q13.1	0.917	1
Amp_20q13.2	Del_9q34.2	0.917	1
ACTL6B	Del_1p22.1	0.918	1
APC	CDH1	0.918	1
ARID1A	AKD1	0.918	1
CASP8	17q-Amp	0.918	1
CDH1	TBL1XR1	0.918	1
CDH1	ANGPT4	0.918	1
CDH1	KDM6A	0.918	1
CDKN1B	Del_1p22.1	0.918	1
FBXW7	Del_4q35.1	0.918	1
GATA3	COL6A5	0.918	1
MYB	NCOR1	0.918	1
NCOR1	TGS1	0.918	1
SMAD4	Amp_12q15	0.918	1
SMAD4	Del_6q27	0.918	1
SMAD4	Del_7q36.1	0.918	1
TBL1XR1	Del_1p22.1	0.918	1
TBX3	SDC1	0.918	1
WSCD2	16p-Del	0.918	1
ZFP36L2	Amp_12q15	0.918	1
ZFP36L2	Del_7q36.1	0.918	1
ATXN7L1	Amp_12q15	0.918	1
CCNL2	Del_6q27	0.918	1
CCNL2	Del_7q36.1	0.918	1
DNAH12	Del_1p22.1	0.918	1
SHISA4	Del_10q23.31	0.918	1
UBC	17q-Amp	0.918	1
ANKRD20A4	Amp_12q15	0.918	1
ATHL1	Del_1p22.1	0.918	1
CASZ1	16p-Del	0.918	1
DLG1	16p-Del	0.918	1
FRMPD2	17q-Amp	0.918	1
MR1	Del_7q36.1	0.918	1
NBPF9	Del_10q23.31	0.918	1
TFE3	Del_7q36.1	0.918	1
TGS1	17q-Amp	0.918	1
4q-Del	Amp_19p13.12	0.918	1
Amp_8p11.21	Amp_17q23.1	0.918	1
AARS	VCPIP1	0.919	1
AARS	ZFP36L1	0.919	1
AARS	HLA-C	0.919	1
AARS	KCNN3	0.919	1
APC	EPDR1	0.919	1
APC	DLX6	0.919	1
APC	FXYD5	0.919	1
APC	AKT2	0.919	1
APC	CDC42EP1	0.919	1
APC	MKL1	0.919	1
APC	NBPF9	0.919	1
ARID1A	20p-Amp	0.919	1
ASB10	Amp_8p11.23	0.919	1
EPDR1	SF3B1	0.919	1
EPDR1	DNAH12	0.919	1
EPDR1	MYH9	0.919	1
EPDR1	KDM6A	0.919	1
EPDR1	9p-Del	0.919	1
ERBB2	FAM20C	0.919	1
ERBB2	RAB42	0.919	1
ERBB2	CCL13	0.919	1
ERBB2	OR2T35	0.919	1
ERBB2	XBP1	0.919	1
ERBB2	OXCT2	0.919	1
ERBB2	PAX2	0.919	1
ERBB2	RHBG	0.919	1
ERBB2	TTPAL	0.919	1
ERBB2	ZBTB7C	0.919	1
ERBB2	ZNF362	0.919	1
FAM20C	DOCK11	0.919	1
FAM20C	Del_9p23	0.919	1
FAM86B1	Amp_8p11.23	0.919	1
GATA3	DLX6	0.919	1
GATA3	FBXO17	0.919	1
GATA3	FXYD5	0.919	1
GATA3	AKT2	0.919	1
GATA3	MKL1	0.919	1
HIST1H3B	18q-Del	0.919	1
HLA-DRB5	DOCK11	0.919	1
MAP2K4	Del_11q23.3	0.919	1
RAB42	DOCK11	0.919	1
RB1	Del_9p23	0.919	1
SF3B1	DLX6	0.919	1
SF3B1	FXYD5	0.919	1
SF3B1	SHISA4	0.919	1
SF3B1	AKT2	0.919	1
SF3B1	CDC42EP1	0.919	1
SF3B1	MKL1	0.919	1
SF3B1	NBPF9	0.919	1
TP53	GPRIN2	0.919	1
TP53	FGFR2	0.919	1
TP53	ZNF687	0.919	1
VCPIP1	ZFP36L1	0.919	1
VCPIP1	HLA-C	0.919	1
VCPIP1	NFE2L3	0.919	1
VCPIP1	EIF4A2	0.919	1
VCPIP1	KCNN3	0.919	1
ZFP36L1	HLA-C	0.919	1
ZFP36L1	NFE2L3	0.919	1
ZFP36L1	EIF4A2	0.919	1
ZFP36L1	KCNN3	0.919	1
DLX6	DNAH12	0.919	1
DLX6	MYH9	0.919	1
DLX6	WDR52	0.919	1
DLX6	KDM6A	0.919	1
DLX6	9p-Del	0.919	1
DNAH12	FBXO17	0.919	1
DNAH12	FXYD5	0.919	1
DNAH12	SHISA4	0.919	1
DNAH12	AKT2	0.919	1
DNAH12	MKL1	0.919	1
DNAH12	NBPF9	0.919	1
FBXO17	Del_10q26.3	0.919	1
FXYD5	MYH9	0.919	1
FXYD5	WDR52	0.919	1
HLA-C	NFE2L3	0.919	1
HLA-C	EIF4A2	0.919	1
HLA-C	KCNN3	0.919	1
MYH9	SHISA4	0.919	1
MYH9	CDC42EP1	0.919	1
MYH9	MKL1	0.919	1
MYH9	NBPF9	0.919	1
OR2T35	Del_9p23	0.919	1
PPEF1	18q-Del	0.919	1
SHISA4	WDR52	0.919	1
SHISA4	9p-Del	0.919	1
WDR52	AKT2	0.919	1
WDR52	CDC42EP1	0.919	1
WDR52	NBPF9	0.919	1
XBP1	DOCK11	0.919	1
ZNF41	18q-Del	0.919	1
AKT2	9p-Del	0.919	1
CDC42EP1	KDM6A	0.919	1
DOCK11	PAX2	0.919	1
DOCK11	RHBG	0.919	1
DOCK11	TTPAL	0.919	1
DOCK11	ZBTB7C	0.919	1
DOCK11	ZNF362	0.919	1
EIF4A2	KCNN3	0.919	1
FGFR2	18q-Del	0.919	1
KDM6A	NBPF9	0.919	1
NBPF9	9p-Del	0.919	1
NBPF9	Del_10q26.3	0.919	1
OXCT2	Del_9p23	0.919	1
ZNF362	Del_9p23	0.919	1
20q-Amp	Amp_19p13.12	0.919	1
8p-Del	Del_5q21.3	0.919	1
Amp_13q34	Del_17p12	0.919	1
ACTL6B	ASB10	0.92	1
ACTL6B	FAM86B1	0.92	1
ACTL6B	TCP10	0.92	1
ACTL6B	GRHL2	0.92	1
ACTL6B	GYG2	0.92	1
ACTL6B	MORN1	0.92	1
ACTL6B	C15orf39	0.92	1
ACTL6B	PSIP1	0.92	1
ACTL6B	SLC35B2	0.92	1
ACTL6B	TPP2	0.92	1
ACTL6B	USP36	0.92	1
ASB10	CDKN1B	0.92	1
ASB10	PTPN22	0.92	1
ASB10	TBL1XR1	0.92	1
ASB10	PRICKLE3	0.92	1
ASB10	ANGPT4	0.92	1
ASB10	ATHL1	0.92	1
ASB10	1q-Del	0.92	1
C1QTNF5	MLL3	0.92	1
CBFB	ERBB2	0.92	1
CBFB	DOCK11	0.92	1
CDKN1B	FAM86B1	0.92	1
CDKN1B	TCP10	0.92	1
CDKN1B	GRHL2	0.92	1
CDKN1B	GYG2	0.92	1
CDKN1B	C15orf39	0.92	1
CDKN1B	PSIP1	0.92	1
CDKN1B	TPP2	0.92	1
CDKN1B	USP36	0.92	1
ERBB2	FOXA1	0.92	1
FAM86B1	PTPN22	0.92	1
FAM86B1	TBL1XR1	0.92	1
FAM86B1	PRICKLE3	0.92	1
FAM86B1	ANGPT4	0.92	1
FAM86B1	ATHL1	0.92	1
HIST1H3B	Amp_19p13.12	0.92	1
MLL3	PTHLH	0.92	1
PIK3CA	MORN1	0.92	1
PIK3CA	PSIP1	0.92	1
PIK3CA	SLC35B2	0.92	1
PIK3CA	TPP2	0.92	1
PIK3R1	Del_6q15	0.92	1
PTPN22	TCP10	0.92	1
PTPN22	GRHL2	0.92	1
PTPN22	SLC35B2	0.92	1
PTPN22	USP36	0.92	1
RPGR	TBX3	0.92	1
RPGR	Del_10q26.3	0.92	1
TBL1XR1	TCP10	0.92	1
TBL1XR1	GYG2	0.92	1
TBL1XR1	MORN1	0.92	1
TBL1XR1	C15orf39	0.92	1
TBL1XR1	PSIP1	0.92	1
TBL1XR1	SLC35B2	0.92	1
TBL1XR1	TPP2	0.92	1
TBL1XR1	USP36	0.92	1
TBX3	ANKRD12	0.92	1
TBX3	TNRC6B	0.92	1
TCP10	PRICKLE3	0.92	1
TCP10	ANGPT4	0.92	1
TCP10	ATHL1	0.92	1
TCP10	1q-Del	0.92	1
ABCA8	Del_6q15	0.92	1
ERBB3	9p-Del	0.92	1
ERBB3	Del_10q26.3	0.92	1
GRHL2	PRICKLE3	0.92	1
GRHL2	ANGPT4	0.92	1
GRHL2	ATHL1	0.92	1
GRHL2	1q-Del	0.92	1
GYG2	PRICKLE3	0.92	1
GYG2	ANGPT4	0.92	1
GYG2	1q-Del	0.92	1
MORN1	ANGPT4	0.92	1
MORN1	ATHL1	0.92	1
MORN1	1q-Del	0.92	1
PPEF1	Amp_19p13.12	0.92	1
PRICKLE3	C15orf39	0.92	1
PRICKLE3	PSIP1	0.92	1
PRICKLE3	SLC35B2	0.92	1
PRICKLE3	TPP2	0.92	1
ANGPT4	C15orf39	0.92	1
ANGPT4	PSIP1	0.92	1
ANGPT4	SLC35B2	0.92	1
ANGPT4	TPP2	0.92	1
ANGPT4	USP36	0.92	1
ATHL1	SLC35B2	0.92	1
ATHL1	TPP2	0.92	1
ATHL1	USP36	0.92	1
C15orf39	1q-Del	0.92	1
CCDC82	Del_2q37.3	0.92	1
CEP57	Del_2q37.3	0.92	1
DOCK11	Del_14q24.1	0.92	1
IRS4	Amp_19p13.12	0.92	1
PSIP1	1q-Del	0.92	1
RHOA	Del_2q37.3	0.92	1
SLC35B2	1q-Del	0.92	1
TNRC6B	Del_10q26.3	0.92	1
TPP2	1q-Del	0.92	1
USP36	1q-Del	0.92	1
16p-Del	Del_1p22.1	0.92	1
18q-Del	Amp_17q23.1	0.92	1
9q-Del	Amp_12q15	0.92	1
Amp_1q44	Del_11q23.3	0.92	1
Amp_19p13.12	Del_9p21.3	0.92	1
ACTL6B	Del_19q13.32	0.921	1
AQP12A	WSCD2	0.921	1
AQP12A	DLG1	0.921	1
AQP12A	MLL4	0.921	1
AQP12A	11p-Del	0.921	1
AQP12A	Del_9q34.2	0.921	1
ARID1A	SPRR2B	0.921	1
ARID1A	SDC1	0.921	1
ERBB2	PIK3CA	0.921	1
FOXA1	Amp_12p13.33	0.921	1
HIST1H2BC	CASZ1	0.921	1
HIST1H2BC	DLG1	0.921	1
HIST1H2BC	MLL4	0.921	1
HIST1H2BC	11p-Del	0.921	1
KRAS	WSCD2	0.921	1
KRAS	DLG1	0.921	1
KRAS	MLL4	0.921	1
MAP2K4	Del_12q23.1	0.921	1
MAP2K4	Del_12q24.31	0.921	1
RAB42	1q-Amp	0.921	1
WSCD2	ICOSLG	0.921	1
WSCD2	CABYR	0.921	1
WSCD2	CCDC82	0.921	1
WSCD2	CEP57	0.921	1
WSCD2	CXCR3	0.921	1
WSCD2	RHOA	0.921	1
WSCD2	TARBP2	0.921	1
ANKRD12	Amp_17q23.1	0.921	1
ERBB3	Amp_17q23.1	0.921	1
FXYD5	4p-Del	0.921	1
ICOSLG	CASZ1	0.921	1
ICOSLG	DLG1	0.921	1
ICOSLG	MLL4	0.921	1
ICOSLG	11p-Del	0.921	1
MLC1	CASZ1	0.921	1
MLC1	DLG1	0.921	1
MLC1	MLL4	0.921	1
OR6C76	CASZ1	0.921	1
PPEF1	Del_6q27	0.921	1
XBP1	1q-Amp	0.921	1
CABYR	CASZ1	0.921	1
CABYR	MLL4	0.921	1
CASZ1	CCDC82	0.921	1
CASZ1	CEP57	0.921	1
CASZ1	CXCR3	0.921	1
CASZ1	TCP11	0.921	1
CCDC82	DLG1	0.921	1
CCDC82	11p-Del	0.921	1
CCDC82	Del_9q34.2	0.921	1
CEP57	MLL4	0.921	1
CXCR3	DLG1	0.921	1
CXCR3	MLL4	0.921	1
DLG1	RHOA	0.921	1
DLG1	TCP11	0.921	1
IRS4	Del_6q27	0.921	1
MKL1	4p-Del	0.921	1
MLL4	TARBP2	0.921	1
MUC6	Del_19p13.3	0.921	1
NF1	SDC1	0.921	1
RBMX	Del_13q14.2	0.921	1
RHBG	1q-Amp	0.921	1
RIBC1	1q-Amp	0.921	1
ZMYM3	Del_19p13.3	0.921	1
17q-Amp	Amp_1q44	0.921	1
1q-Del	Del_19q13.32	0.921	1
22q-Del	Amp_11q14.1	0.921	1
Amp_6p23	Del_22q13.32	0.921	1
Amp_19q12	Del_6p25.3	0.921	1
Del_6p25.3	Del_21q11.2	0.921	1
C1QTNF5	GPS2	0.922	1
C1QTNF5	HIST1H3B	0.922	1
C1QTNF5	THEM5	0.922	1
C1QTNF5	GPRIN2	0.922	1
C1QTNF5	PPEF1	0.922	1
C1QTNF5	ZNF41	0.922	1
C1QTNF5	IRS4	0.922	1
C1QTNF5	ZNF687	0.922	1
GPS2	PTHLH	0.922	1
GPS2	SMAD2	0.922	1
GPS2	SMAD4	0.922	1
GPS2	ZFP36L2	0.922	1
GPS2	ATXN7L1	0.922	1
GPS2	CCNL2	0.922	1
GPS2	OR4D10	0.922	1
GPS2	ANKRD20A4	0.922	1
GPS2	TFE3	0.922	1
HIST1H3B	PTHLH	0.922	1
HIST1H3B	SMAD2	0.922	1
HIST1H3B	ATXN7L1	0.922	1
HIST1H3B	ANKRD20A4	0.922	1
HIST1H3B	MR1	0.922	1
HIST1H3B	TFE3	0.922	1
PTEN	CASZ1	0.922	1
PTEN	DLG1	0.922	1
PTEN	MLL4	0.922	1
PTHLH	THEM5	0.922	1
PTHLH	GPRIN2	0.922	1
PTHLH	PPEF1	0.922	1
PTHLH	ZNF41	0.922	1
PTHLH	FGFR2	0.922	1
PTHLH	ZNF687	0.922	1
SMAD2	THEM5	0.922	1
SMAD2	ZNF687	0.922	1
SMAD4	GPRIN2	0.922	1
SMAD4	ZNF41	0.922	1
SMAD4	IRS4	0.922	1
SMAD4	ZNF687	0.922	1
TAF1L	4p-Del	0.922	1
THEM5	ATXN7L1	0.922	1
THEM5	CCNL2	0.922	1
THEM5	ANKRD20A4	0.922	1
THEM5	TFE3	0.922	1
VCPIP1	1p-Del	0.922	1
WSCD2	Del_18q23	0.922	1
ZFP36L2	GPRIN2	0.922	1
ZFP36L2	PPEF1	0.922	1
ZFP36L2	ZNF41	0.922	1
ZFP36L2	FGFR2	0.922	1
ZFP36L2	IRS4	0.922	1
ZFP36L2	ZNF687	0.922	1
AKD1	5p-Amp	0.922	1
ATXN7L1	GPRIN2	0.922	1
ATXN7L1	ZNF41	0.922	1
ATXN7L1	FGFR2	0.922	1
CCNL2	GPRIN2	0.922	1
CCNL2	ZNF41	0.922	1
CCNL2	FGFR2	0.922	1
CCNL2	ZNF687	0.922	1
DLX6	Amp_8p11.23	0.922	1
ERBB3	17p-Del	0.922	1
GPRIN2	OR4D10	0.922	1
GPRIN2	ANKRD20A4	0.922	1
GPRIN2	MR1	0.922	1
GPRIN2	TFE3	0.922	1
NFE2L3	Amp_14q21.1	0.922	1
OR4D10	PPEF1	0.922	1
OR4D10	ZNF687	0.922	1
PPEF1	ANKRD20A4	0.922	1
PPEF1	TFE3	0.922	1
ZNF41	ANKRD20A4	0.922	1
AKT2	18p-Del	0.922	1
AKT2	Amp_8p11.23	0.922	1
ANKRD20A4	FGFR2	0.922	1
ANKRD20A4	IRS4	0.922	1
ANKRD20A4	ZNF687	0.922	1
DLG1	Del_18q23	0.922	1
FGFR2	TFE3	0.922	1
KCNN3	1p-Del	0.922	1
MED23	4q-Del	0.922	1
MLL4	Del_18q23	0.922	1
MUC6	4q-Del	0.922	1
NBPF9	18p-Del	0.922	1
PCNXL2	Del_9p21.3	0.922	1
RBMX	4q-Del	0.922	1
18q-Del	Amp_8q24.21	0.922	1
1q-Del	Amp_3q26.32	0.922	1
Amp_11q14.1	Del_17q21.31	0.922	1
FAM86B1	5q-Del	0.923	1
HIST1H3B	Amp_8p11.23	0.923	1
HLA-DRB5	RB1	0.923	1
PIK3R1	SPEN	0.923	1
PTHLH	Del_1p36.13	0.923	1
RAB42	RB1	0.923	1
RB1	CCL13	0.923	1
RB1	XBP1	0.923	1
RB1	OXCT2	0.923	1
RB1	PAX2	0.923	1
RB1	RHBG	0.923	1
RB1	TTPAL	0.923	1
RB1	ZBTB7C	0.923	1
RB1	ZNF362	0.923	1
SF3B1	Amp_3q26.32	0.923	1
TCP10	5q-Del	0.923	1
ATXN2	Amp_8q24.21	0.923	1
MYH9	Amp_3q26.32	0.923	1
PPEF1	Amp_8p11.23	0.923	1
BCORL1	SPEN	0.923	1
CASZ1	Amp_17q23.1	0.923	1
TPP2	5q-Del	0.923	1
USP36	5q-Del	0.923	1
8q-Amp	Del_20p13	0.923	1
22q-Del	Amp_19q13.42	0.923	1
Amp_6p23	Del_6q15	0.923	1
Del_10q23.31	Del_21q11.2	0.923	1
ACTL6B	7p-Amp	0.924	1
C1QTNF5	15q-Del	0.924	1
C1QTNF5	Del_20p13	0.924	1
CDH1	Del_12q24.31	0.924	1
CDKN1B	Amp_1p22.3	0.924	1
EPDR1	FBXW7	0.924	1
EPDR1	PIK3R1	0.924	1
EPDR1	ABCA8	0.924	1
EPDR1	BCORL1	0.924	1
EPDR1	18q-Del	0.924	1
FBXW7	DLX6	0.924	1
FBXW7	FBXO17	0.924	1
FBXW7	FXYD5	0.924	1
FBXW7	AKT2	0.924	1
FBXW7	CDC42EP1	0.924	1
FBXW7	MKL1	0.924	1
FBXW7	NBPF9	0.924	1
FOXA1	Amp_8p11.21	0.924	1
FOXA1	Amp_19q12	0.924	1
MAP2K4	RBMX	0.924	1
MAP2K4	ZMYM3	0.924	1
MAP2K4	6q-Del	0.924	1
PIK3R1	DLX6	0.924	1
PIK3R1	FBXO17	0.924	1
PIK3R1	FXYD5	0.924	1
PIK3R1	SHISA4	0.924	1
PIK3R1	AKT2	0.924	1
PIK3R1	CDC42EP1	0.924	1
PIK3R1	NBPF9	0.924	1
PTHLH	9q-Del	0.924	1
PTHLH	Del_20p13	0.924	1
RUNX1	SF3B1	0.924	1
RUNX1	MYH9	0.924	1
RUNX1	KDM6A	0.924	1
SMAD2	Del_20p13	0.924	1
SMAD4	Del_20p13	0.924	1
TBL1XR1	Amp_1p22.3	0.924	1
TBX3	16p-Del	0.924	1
ABCA8	DLX6	0.924	1
ABCA8	FXYD5	0.924	1
ABCA8	SHISA4	0.924	1
ABCA8	CDC42EP1	0.924	1
ABCA8	MKL1	0.924	1
ABCA8	NBPF9	0.924	1
ATXN7L1	9q-Del	0.924	1
CCNL2	9q-Del	0.924	1
CCNL2	Del_20p13	0.924	1
COL6A5	18p-Del	0.924	1
DLX6	BCORL1	0.924	1
FBXO17	BCORL1	0.924	1
FXYD5	BCORL1	0.924	1
HRNR	Amp_14q21.1	0.924	1
OR4D10	9q-Del	0.924	1
OR4D10	Del_20p13	0.924	1
PRICKLE3	7p-Amp	0.924	1
SHISA4	BCORL1	0.924	1
SHISA4	8p-Amp	0.924	1
AKT2	BCORL1	0.924	1
AKT2	8p-Amp	0.924	1
AKT2	18q-Del	0.924	1
ATHL1	7p-Amp	0.924	1
BCORL1	CDC42EP1	0.924	1
BCORL1	NBPF9	0.924	1
MKL1	8p-Amp	0.924	1
NBPF9	8p-Amp	0.924	1
NBPF9	18q-Del	0.924	1
TFE3	9q-Del	0.924	1
TFE3	Del_20p13	0.924	1
7p-Amp	1q-Del	0.924	1
Amp_1q21.3	Amp_6q21	0.924	1
Amp_1q21.3	Amp_11p13	0.924	1
Amp_10q22.3	Del_4q35.1	0.924	1
Del_11q23.3	Del_21q11.2	0.924	1
APC	Amp_15q26.3	0.925	1
FBXW7	Del_20p13	0.925	1
FOXA1	Amp_19p13.12	0.925	1
MAP3K1	ATXN2	0.925	1
MAP3K1	MED23	0.925	1
MAP3K1	ZMYM3	0.925	1
MLL3	Del_8p23.2	0.925	1
RB1	1p-Del	0.925	1
VCPIP1	Del_12q24.31	0.925	1
ABCA8	9q-Del	0.925	1
ABCA8	Del_20p13	0.925	1
ANKRD12	18p-Del	0.925	1
DLX6	6q-Del	0.925	1
FHOD3	Amp_8q24.21	0.925	1
HRNR	Del_9p21.3	0.925	1
OR2T35	Del_19p13.3	0.925	1
WDR52	Amp_1p22.3	0.925	1
WDR52	Del_9p21.3	0.925	1
BCORL1	Del_20p13	0.925	1
CDC42EP1	6q-Del	0.925	1
EIF4A2	Del_12q23.1	0.925	1
EIF4A2	Del_12q24.31	0.925	1
KCNN3	Del_12q23.1	0.925	1
KCNN3	Del_12q24.31	0.925	1
KDM6A	Amp_15q26.3	0.925	1
MUC6	Del_9q21.11	0.925	1
OXCT2	Del_19p13.3	0.925	1
RBMX	Amp_12p13.33	0.925	1
SLC35B2	Del_18q23	0.925	1
ZNF362	Del_19p13.3	0.925	1
8p-Amp	Del_14q24.1	0.925	1
Amp_8p11.21	Del_1p36.13	0.925	1
ARID1A	CTCF	0.926	1
ARID1A	PIWIL1	0.926	1
ARID1A	RPGR	0.926	1
ARID1A	ANKRD12	0.926	1
CTCF	NF1	0.926	1
ERBB2	Del_16q24.3	0.926	1
MAP2K4	7q-Amp	0.926	1
PTEN	Del_4p16.3	0.926	1
WSCD2	DST	0.926	1
WSCD2	Del_6p25.3	0.926	1
ANKRD12	NF1	0.926	1
ANGPT4	Amp_10p15.1	0.926	1
ATHL1	Amp_10p15.1	0.926	1
NF1	TNRC6B	0.926	1
PCNXL2	Del_6p25.3	0.926	1
TGS1	Amp_20q13.2	0.926	1
16p-Amp	Amp_11p13	0.926	1
8p-Amp	Del_6q27	0.926	1
11q-Del	Amp_19p13.12	0.926	1
17q-Del	Amp_17q23.1	0.926	1
1q-Del	Amp_10p15.1	0.926	1
1q-Del	Amp_17q12	0.926	1
Amp_4q13.3	Amp_10q22.3	0.926	1
Amp_13q34	Del_18q23	0.926	1
Amp_17q23.1	Del_10q23.31	0.926	1
AARS	ASB10	0.927	1
AARS	FAM86B1	0.927	1
AARS	TCP10	0.927	1
AARS	GRHL2	0.927	1
AARS	MORN1	0.927	1
AARS	C15orf39	0.927	1
AARS	SLC35B2	0.927	1
AARS	TPP2	0.927	1
AARS	USP36	0.927	1
APC	Amp_10p15.1	0.927	1
AQP12A	CASP8	0.927	1
AQP12A	MYB	0.927	1
AQP12A	TP53	0.927	1
AQP12A	FHOD3	0.927	1
AQP12A	UBC	0.927	1
AQP12A	TGS1	0.927	1
ASB10	VCPIP1	0.927	1
ASB10	ZFP36L1	0.927	1
ASB10	HLA-C	0.927	1
ASB10	NFE2L3	0.927	1
ASB10	EIF4A2	0.927	1
ASB10	KCNN3	0.927	1
ASB10	Del_17q21.31	0.927	1
CASP8	HIST1H2BC	0.927	1
CASP8	KRAS	0.927	1
CASP8	ICOSLG	0.927	1
CASP8	MLC1	0.927	1
CASP8	CABYR	0.927	1
CASP8	CXCR3	0.927	1
CASP8	RHOA	0.927	1
CASP8	TARBP2	0.927	1
CASP8	TCP11	0.927	1
FAM20C	AKD1	0.927	1
FAM86B1	VCPIP1	0.927	1
FAM86B1	ZFP36L1	0.927	1
FAM86B1	HLA-C	0.927	1
FAM86B1	NFE2L3	0.927	1
FAM86B1	EIF4A2	0.927	1
FBXW7	20q-Amp	0.927	1
FBXW7	Amp_11q14.1	0.927	1
HIST1H2BC	MYB	0.927	1
HIST1H2BC	TP53	0.927	1
HIST1H2BC	FHOD3	0.927	1
HIST1H2BC	UBC	0.927	1
HIST1H2BC	FRMPD2	0.927	1
HIST1H2BC	TGS1	0.927	1
HLA-DRB5	AKD1	0.927	1
KRAS	MYB	0.927	1
KRAS	TP53	0.927	1
KRAS	FHOD3	0.927	1
KRAS	UBC	0.927	1
KRAS	TGS1	0.927	1
MYB	ICOSLG	0.927	1
MYB	MLC1	0.927	1
MYB	OR6C76	0.927	1
MYB	CABYR	0.927	1
MYB	CCDC82	0.927	1
MYB	CEP57	0.927	1
MYB	CXCR3	0.927	1
MYB	RHOA	0.927	1
MYB	TARBP2	0.927	1
MYB	TCP11	0.927	1
PIK3R1	20q-Amp	0.927	1
PIWIL1	18q-Del	0.927	1
PTPN22	Amp_3p25.1	0.927	1
PTPN22	Del_7p22.3	0.927	1
RAB42	AKD1	0.927	1
RPGR	18q-Del	0.927	1
TCP10	VCPIP1	0.927	1
TCP10	ZFP36L1	0.927	1
TCP10	NFE2L3	0.927	1
TCP10	EIF4A2	0.927	1
TCP10	KCNN3	0.927	1
TP53	MLC1	0.927	1
TP53	CEP57	0.927	1
TP53	CXCR3	0.927	1
TP53	TARBP2	0.927	1
VCPIP1	GYG2	0.927	1
VCPIP1	C15orf39	0.927	1
VCPIP1	PSIP1	0.927	1
VCPIP1	SLC35B2	0.927	1
VCPIP1	USP36	0.927	1
ZFP36L1	GRHL2	0.927	1
ZFP36L1	GYG2	0.927	1
ZFP36L1	MORN1	0.927	1
ZFP36L1	C15orf39	0.927	1
ZFP36L1	PSIP1	0.927	1
ZFP36L1	SLC35B2	0.927	1
ZFP36L1	TPP2	0.927	1
ZFP36L1	USP36	0.927	1
ZFP36L1	Del_15q13.1	0.927	1
AKD1	CCL13	0.927	1
AKD1	OR2T35	0.927	1
AKD1	OXCT2	0.927	1
AKD1	PAX2	0.927	1
AKD1	TTPAL	0.927	1
AKD1	ZNF362	0.927	1
ANKRD12	18q-Del	0.927	1
COL6A5	SDC1	0.927	1
COL6A5	18q-Del	0.927	1
DST	Del_20p13	0.927	1
FHOD3	MLC1	0.927	1
FHOD3	OR6C76	0.927	1
FHOD3	CABYR	0.927	1
FHOD3	CCDC82	0.927	1
FHOD3	CXCR3	0.927	1
FHOD3	RHOA	0.927	1
FHOD3	TARBP2	0.927	1
GRHL2	HLA-C	0.927	1
GRHL2	NFE2L3	0.927	1
GRHL2	EIF4A2	0.927	1
GRHL2	KCNN3	0.927	1
GYG2	KCNN3	0.927	1
HLA-C	MORN1	0.927	1
HLA-C	PSIP1	0.927	1
HLA-C	SLC35B2	0.927	1
HLA-C	TPP2	0.927	1
HLA-C	USP36	0.927	1
ICOSLG	UBC	0.927	1
ICOSLG	FRMPD2	0.927	1
ICOSLG	TGS1	0.927	1
MLC1	UBC	0.927	1
MLC1	TGS1	0.927	1
MLC1	Del_6p25.3	0.927	1
MORN1	NFE2L3	0.927	1
MORN1	EIF4A2	0.927	1
MORN1	KCNN3	0.927	1
NFE2L3	C15orf39	0.927	1
NFE2L3	SLC35B2	0.927	1
NFE2L3	TPP2	0.927	1
NFE2L3	USP36	0.927	1
OR6C76	FRMPD2	0.927	1
OR6C76	TGS1	0.927	1
PRICKLE3	Amp_3p25.1	0.927	1
UBC	CABYR	0.927	1
UBC	CCDC82	0.927	1
UBC	CXCR3	0.927	1
UBC	RHOA	0.927	1
UBC	TARBP2	0.927	1
UBC	TCP11	0.927	1
WDR52	Amp_10p15.1	0.927	1
ZNF41	Amp_10q22.3	0.927	1
C15orf39	EIF4A2	0.927	1
C15orf39	KCNN3	0.927	1
CABYR	FRMPD2	0.927	1
CABYR	TGS1	0.927	1
CEP57	FRMPD2	0.927	1
CXCR3	FRMPD2	0.927	1
CXCR3	TGS1	0.927	1
CXCR3	Del_6p25.3	0.927	1
EIF4A2	SLC35B2	0.927	1
EIF4A2	TPP2	0.927	1
EIF4A2	USP36	0.927	1
FGFR2	Amp_10q22.3	0.927	1
FRMPD2	TARBP2	0.927	1
FRMPD2	TCP11	0.927	1
IRS4	Amp_10q22.3	0.927	1
KCNN3	SLC35B2	0.927	1
KCNN3	TPP2	0.927	1
KCNN3	USP36	0.927	1
KCNN3	Del_15q13.1	0.927	1
MUC6	14q-Del	0.927	1
MUC6	Amp_17q12	0.927	1
MUC6	Del_21q11.2	0.927	1
PSIP1	Del_17q21.31	0.927	1
TARBP2	TGS1	0.927	1
TCP11	Del_6p25.3	0.927	1
TNRC6B	8p-Amp	0.927	1
11q-Del	Amp_13q34	0.927	1
16q-Del	Del_9p23	0.927	1
1q-Del	Amp_3p25.1	0.927	1
1q-Del	Del_7p22.3	0.927	1
6q-Del	Del_17q21.31	0.927	1
Amp_6p23	Amp_8p11.23	0.927	1
Amp_6q21	Del_2q37.3	0.927	1
Amp_12q15	Amp_13q34	0.927	1
Amp_13q34	Del_7q36.1	0.927	1
Amp_19q13.42	Del_2q37.3	0.927	1
ASB10	Amp_19q13.42	0.928	1
FAM86B1	Amp_11p13	0.928	1
HIST1H3B	Del_1p36.13	0.928	1
TCP10	Amp_11p13	0.928	1
AKD1	Amp_13q34	0.928	1
ATXN2	HRNR	0.928	1
CCL13	Del_14q24.1	0.928	1
COL6A5	9q-Del	0.928	1
COL6A5	Del_17p12	0.928	1
GRHL2	5p-Amp	0.928	1
GYG2	5p-Amp	0.928	1
HRNR	RBMX	0.928	1
MORN1	Amp_11p13	0.928	1
ZNF41	Del_1p36.13	0.928	1
C15orf39	Amp_6q21	0.928	1
EIF4A2	16q-Del	0.928	1
OXCT2	Del_14q24.1	0.928	1
PAX2	Del_14q24.1	0.928	1
PSIP1	5p-Amp	0.928	1
PSIP1	Amp_6q21	0.928	1
PSIP1	Amp_19q13.42	0.928	1
SDC1	13q-Del	0.928	1
SDC1	Amp_1q44	0.928	1
SLC35B2	Amp_6q21	0.928	1
SLC35B2	Amp_11p13	0.928	1
TPP2	Amp_19q13.42	0.928	1
USP36	5p-Amp	0.928	1
USP36	Amp_6q21	0.928	1
USP36	Amp_11p13	0.928	1
USP36	Amp_19q13.42	0.928	1
ZBTB7C	Del_11p15.5	0.928	1
ZNF362	Del_11p15.5	0.928	1
ZNF362	Del_14q24.1	0.928	1
Amp_8p11.23	Del_12q23.1	0.928	1
Amp_11q14.1	Del_6q15	0.928	1
Amp_11q14.1	Del_22q13.32	0.928	1
Amp_17q23.1	Del_9q34.2	0.928	1
Del_10q26.3	Del_21q11.2	0.928	1
ACTL6B	C1QTNF5	0.929	1
ACTL6B	PTHLH	0.929	1
ACTL6B	SMAD2	0.929	1
ACTL6B	SMAD4	0.929	1
ACTL6B	ZFP36L2	0.929	1
ACTL6B	ATXN7L1	0.929	1
ACTL6B	CCNL2	0.929	1
ACTL6B	OR4D10	0.929	1
ACTL6B	ANKRD20A4	0.929	1
ACTL6B	MR1	0.929	1
ACTL6B	TFE3	0.929	1
ARID1A	8q-Amp	0.929	1
C1QTNF5	PTPN22	0.929	1
C1QTNF5	TBL1XR1	0.929	1
C1QTNF5	PRICKLE3	0.929	1
C1QTNF5	ANGPT4	0.929	1
C1QTNF5	ATHL1	0.929	1
C1QTNF5	1q-Del	0.929	1
CDKN1B	PTHLH	0.929	1
CDKN1B	SMAD2	0.929	1
CDKN1B	ZFP36L2	0.929	1
CDKN1B	ATXN7L1	0.929	1
CDKN1B	OR4D10	0.929	1
CDKN1B	ANKRD20A4	0.929	1
CDKN1B	MR1	0.929	1
CDKN1B	TFE3	0.929	1
EPDR1	ATXN2	0.929	1
EPDR1	MED23	0.929	1
EPDR1	MUC6	0.929	1
EPDR1	RBMX	0.929	1
EPDR1	ZMYM3	0.929	1
ERBB2	11p-Del	0.929	1
HIST1H3B	20p-Amp	0.929	1
MYB	Amp_1q44	0.929	1
PTHLH	PTPN22	0.929	1
PTHLH	TBL1XR1	0.929	1
PTHLH	PRICKLE3	0.929	1
PTHLH	ATHL1	0.929	1
PTHLH	1q-Del	0.929	1
PTHLH	Del_3p21.31	0.929	1
PTHLH	Del_9p21.3	0.929	1
PTPN22	SMAD2	0.929	1
PTPN22	ZFP36L2	0.929	1
PTPN22	OR4D10	0.929	1
PTPN22	ANKRD20A4	0.929	1
PTPN22	TFE3	0.929	1
RB1	Del_12q23.1	0.929	1
SMAD2	TBL1XR1	0.929	1
SMAD2	PRICKLE3	0.929	1
SMAD2	ATHL1	0.929	1
SMAD2	1q-Del	0.929	1
SMAD2	Del_9p21.3	0.929	1
SMAD4	TBL1XR1	0.929	1
SMAD4	PRICKLE3	0.929	1
SMAD4	1q-Del	0.929	1
SMAD4	Del_9p21.3	0.929	1
TBL1XR1	ZFP36L2	0.929	1
TBL1XR1	ATXN7L1	0.929	1
TBL1XR1	CCNL2	0.929	1
TBL1XR1	OR4D10	0.929	1
TBL1XR1	ANKRD20A4	0.929	1
TBL1XR1	MR1	0.929	1
TBL1XR1	TFE3	0.929	1
TBX3	WDR52	0.929	1
THEM5	1q-Amp	0.929	1
THEM5	20p-Amp	0.929	1
ZFP36L2	PRICKLE3	0.929	1
ZFP36L2	ATHL1	0.929	1
ZFP36L2	1q-Del	0.929	1
AKD1	Del_5q21.3	0.929	1
ATXN2	DLX6	0.929	1
ATXN2	FXYD5	0.929	1
ATXN2	SHISA4	0.929	1
ATXN2	AKT2	0.929	1
ATXN2	MKL1	0.929	1
ATXN2	NBPF9	0.929	1
ATXN7L1	PRICKLE3	0.929	1
ATXN7L1	1q-Del	0.929	1
CCNL2	PRICKLE3	0.929	1
CCNL2	ANGPT4	0.929	1
CCNL2	1q-Del	0.929	1
DLX6	MED23	0.929	1
DLX6	MUC6	0.929	1
DLX6	ZMYM3	0.929	1
DST	Amp_6p23	0.929	1
DST	Del_6q27	0.929	1
FBXO17	MED23	0.929	1
FBXO17	ZMYM3	0.929	1
FHOD3	16p-Del	0.929	1
FXYD5	MED23	0.929	1
FXYD5	MUC6	0.929	1
FXYD5	ZMYM3	0.929	1
OR4D10	PRICKLE3	0.929	1
OR4D10	ATHL1	0.929	1
OR4D10	1q-Del	0.929	1
PRICKLE3	ANKRD20A4	0.929	1
PRICKLE3	TFE3	0.929	1
SHISA4	MED23	0.929	1
SHISA4	MUC6	0.929	1
SHISA4	RBMX	0.929	1
SHISA4	ZMYM3	0.929	1
AKT2	MED23	0.929	1
AKT2	ZMYM3	0.929	1
ANGPT4	ANKRD20A4	0.929	1
ANKRD20A4	ATHL1	0.929	1
ANKRD20A4	1q-Del	0.929	1
ATHL1	TFE3	0.929	1
ATHL1	Del_10q23.31	0.929	1
CDC42EP1	MED23	0.929	1
CDC42EP1	MUC6	0.929	1
CDC42EP1	RBMX	0.929	1
CDC42EP1	ZMYM3	0.929	1
FRMPD2	16p-Del	0.929	1
IRS4	20p-Amp	0.929	1
MED23	MKL1	0.929	1
MED23	NBPF9	0.929	1
MKL1	MUC6	0.929	1
MKL1	RBMX	0.929	1
MLL4	Del_9p23	0.929	1
MR1	1q-Del	0.929	1
NBPF9	RBMX	0.929	1
NBPF9	ZMYM3	0.929	1
TFE3	1q-Del	0.929	1
ZNF687	20p-Amp	0.929	1
20p-Amp	Del_6p25.3	0.929	1
1q-Del	Del_10q23.31	0.929	1
4p-Del	Del_6q15	0.929	1
Amp_3q26.32	Del_10q23.31	0.929	1
Amp_6q21	Amp_17q23.1	0.929	1
Del_12q23.1	Del_19p13.3	0.929	1
CBFB	SPRR2B	0.93	1
CBFB	SDC1	0.93	1
FOXA1	SPRR2B	0.93	1
FOXA1	SDC1	0.93	1
HIST1H3B	NCOR1	0.93	1
NCOR1	THEM5	0.93	1
NCOR1	GPRIN2	0.93	1
NCOR1	PPEF1	0.93	1
NCOR1	ZNF687	0.93	1
THEM5	17q-Amp	0.93	1
THEM5	Amp_4q13.3	0.93	1
TP53	8p-Amp	0.93	1
ATXN2	Amp_12q15	0.93	1
MLC1	Del_12p13.1	0.93	1
PRICKLE3	Amp_8q24.21	0.93	1
ZNF41	17q-Amp	0.93	1
ZNF41	Amp_4q13.3	0.93	1
FGFR2	17q-Amp	0.93	1
MUC6	Amp_12q15	0.93	1
MUC6	Del_7q36.1	0.93	1
RHOA	Del_12p13.1	0.93	1
RHOA	Del_17p12	0.93	1
SPEN	Del_12p13.1	0.93	1
ZMYM3	Amp_12q15	0.93	1
17q-Amp	6q-Del	0.93	1
8q-Amp	Del_2q37.3	0.93	1
15q-Del	Amp_6q21	0.93	1
16p-Del	Amp_1p22.3	0.93	1
1q-Del	Amp_8q24.21	0.93	1
9q-Del	Amp_6q21	0.93	1
Amp_11p13	Del_20p13	0.93	1
Amp_11q14.1	Amp_17q23.1	0.93	1
Amp_12p13.33	Amp_14q21.1	0.93	1
ACTL6B	Del_10q26.3	0.931	1
CDKN1B	PIK3CA	0.931	1
CTCF	FAM20C	0.931	1
CTCF	HLA-DRB5	0.931	1
CTCF	RAB42	0.931	1
CTCF	CCL13	0.931	1
CTCF	OR2T35	0.931	1
CTCF	XBP1	0.931	1
CTCF	OXCT2	0.931	1
CTCF	PAX2	0.931	1
CTCF	RHBG	0.931	1
CTCF	RIBC1	0.931	1
CTCF	TTPAL	0.931	1
CTCF	ZBTB7C	0.931	1
CTCF	ZNF362	0.931	1
EPDR1	20p-Amp	0.931	1
FAM20C	PIWIL1	0.931	1
FAM20C	RPGR	0.931	1
FAM20C	TAF1L	0.931	1
FAM20C	ANKRD12	0.931	1
FAM20C	ERBB3	0.931	1
FAM20C	TNRC6B	0.931	1
HLA-DRB5	RPGR	0.931	1
HLA-DRB5	TAF1L	0.931	1
HLA-DRB5	ANKRD12	0.931	1
HLA-DRB5	ERBB3	0.931	1
PIK3CA	PTPN22	0.931	1
PIK3R1	Del_4p16.3	0.931	1
PIWIL1	RAB42	0.931	1
PIWIL1	CCL13	0.931	1
PIWIL1	OR2T35	0.931	1
PIWIL1	OXCT2	0.931	1
PIWIL1	PAX2	0.931	1
PIWIL1	TTPAL	0.931	1
PIWIL1	ZBTB7C	0.931	1
RAB42	RPGR	0.931	1
RAB42	TAF1L	0.931	1
RAB42	ANKRD12	0.931	1
RAB42	ERBB3	0.931	1
RAB42	TNRC6B	0.931	1
RPGR	CCL13	0.931	1
RPGR	OR2T35	0.931	1
RPGR	OXCT2	0.931	1
RPGR	PAX2	0.931	1
RPGR	ZBTB7C	0.931	1
SMAD2	11q-Del	0.931	1
SMAD2	Del_16q24.3	0.931	1
TAF1L	CCL13	0.931	1
TAF1L	OR2T35	0.931	1
TAF1L	XBP1	0.931	1
TAF1L	PAX2	0.931	1
TAF1L	TTPAL	0.931	1
TAF1L	ZNF362	0.931	1
TBX3	16p-Amp	0.931	1
VCPIP1	Amp_17q23.1	0.931	1
ANKRD12	CCL13	0.931	1
ANKRD12	OR2T35	0.931	1
ANKRD12	XBP1	0.931	1
ANKRD12	OXCT2	0.931	1
ANKRD12	PAX2	0.931	1
ANKRD12	RHBG	0.931	1
ANKRD12	ZBTB7C	0.931	1
ANKRD12	ZNF362	0.931	1
CCL13	TNRC6B	0.931	1
CCNL2	11q-Del	0.931	1
CCNL2	Del_16q24.3	0.931	1
ERBB3	OR2T35	0.931	1
ERBB3	PAX2	0.931	1
ERBB3	RIBC1	0.931	1
ERBB3	ZBTB7C	0.931	1
ERBB3	ZNF362	0.931	1
FBXO17	20p-Amp	0.931	1
NFE2L3	Amp_17q23.1	0.931	1
OR2T35	TNRC6B	0.931	1
PPEF1	Del_5q21.3	0.931	1
PRICKLE3	9p-Del	0.931	1
SHISA4	20p-Amp	0.931	1
XBP1	TNRC6B	0.931	1
AKT2	20p-Amp	0.931	1
DLG1	Del_12p13.1	0.931	1
KCNN3	Amp_17q23.1	0.931	1
OXCT2	TNRC6B	0.931	1
PAX2	TNRC6B	0.931	1
PAX2	Del_11q23.3	0.931	1
SLC35B2	Del_9p23	0.931	1
TNRC6B	TTPAL	0.931	1
TNRC6B	ZBTB7C	0.931	1
TNRC6B	ZNF362	0.931	1
ZBTB7C	Del_11q23.3	0.931	1
7q-Amp	Amp_14q21.1	0.931	1
8q-Amp	16p-Del	0.931	1
18q-Del	Del_8p23.2	0.931	1
1q-Del	Del_10q26.3	0.931	1
9q-Del	Amp_3p25.1	0.931	1
9q-Del	Amp_8p11.23	0.931	1
Amp_3p25.1	Del_6q27	0.931	1
Amp_6q21	Amp_17q12	0.931	1
Amp_12q15	Amp_19p13.12	0.931	1
CASP8	PTEN	0.932	1
CTCF	5p-Amp	0.932	1
MLL3	ATXN2	0.932	1
PTEN	UBC	0.932	1
PTEN	FRMPD2	0.932	1
RUNX1	ABCA8	0.932	1
RUNX1	BCORL1	0.932	1
SMAD2	Amp_15q26.3	0.932	1
TAF1L	Amp_19q13.42	0.932	1
TCP10	Amp_11q13.3	0.932	1
ATXN7L1	Amp_15q26.3	0.932	1
ERBB3	Amp_19q13.42	0.932	1
FXYD5	Del_5q21.3	0.932	1
HRNR	7q-Amp	0.932	1
HRNR	Amp_12p13.33	0.932	1
SHISA4	Del_5q21.3	0.932	1
AKT2	Amp_11q13.3	0.932	1
MR1	Amp_15q26.3	0.932	1
NBPF9	Del_5q21.3	0.932	1
RBMX	7q-Amp	0.932	1
TPP2	Amp_11q13.3	0.932	1
USP36	Amp_11q13.3	0.932	1
ZMYM3	7q-Amp	0.932	1
17q-Amp	Amp_4q13.3	0.932	1
8p-Amp	Amp_11q13.3	0.932	1
17p-Del	Amp_11p13	0.932	1
Amp_11p13	Amp_20q13.2	0.932	1
Amp_11p13	Del_17p12	0.932	1
Amp_19p13.12	Del_22q13.32	0.932	1
Del_16q24.3	Del_19p13.3	0.932	1
ACTL6B	Amp_19p13.12	0.933	1
AQP12A	HIST1H3B	0.933	1
AQP12A	THEM5	0.933	1
AQP12A	PPEF1	0.933	1
AQP12A	ZNF41	0.933	1
AQP12A	FGFR2	0.933	1
AQP12A	IRS4	0.933	1
AQP12A	ZNF687	0.933	1
ARID1A	SF3B1	0.933	1
ARID1A	DNAH12	0.933	1
ARID1A	WDR52	0.933	1
FAM20C	Del_15q13.1	0.933	1
FAM86B1	Amp_13q34	0.933	1
GPS2	HIST1H2BC	0.933	1
GPS2	KRAS	0.933	1
GPS2	ICOSLG	0.933	1
GPS2	MLC1	0.933	1
GPS2	OR6C76	0.933	1
GPS2	CABYR	0.933	1
GPS2	CCDC82	0.933	1
GPS2	CEP57	0.933	1
GPS2	CXCR3	0.933	1
GPS2	RHOA	0.933	1
GPS2	TARBP2	0.933	1
GPS2	TCP11	0.933	1
HIST1H2BC	HIST1H3B	0.933	1
HIST1H2BC	THEM5	0.933	1
HIST1H2BC	GPRIN2	0.933	1
HIST1H2BC	PPEF1	0.933	1
HIST1H2BC	ZNF41	0.933	1
HIST1H2BC	FGFR2	0.933	1
HIST1H2BC	IRS4	0.933	1
HIST1H2BC	ZNF687	0.933	1
HIST1H3B	KRAS	0.933	1
HIST1H3B	ICOSLG	0.933	1
HIST1H3B	MLC1	0.933	1
HIST1H3B	OR6C76	0.933	1
HIST1H3B	CABYR	0.933	1
HIST1H3B	CXCR3	0.933	1
HIST1H3B	TARBP2	0.933	1
KRAS	PPEF1	0.933	1
KRAS	IRS4	0.933	1
KRAS	ZNF687	0.933	1
PTPN22	4p-Del	0.933	1
PTPN22	Amp_19p13.12	0.933	1
SF3B1	NF1	0.933	1
TCP10	Amp_13q34	0.933	1
THEM5	ICOSLG	0.933	1
THEM5	MLC1	0.933	1
THEM5	OR6C76	0.933	1
THEM5	CABYR	0.933	1
THEM5	CCDC82	0.933	1
THEM5	CEP57	0.933	1
THEM5	CXCR3	0.933	1
THEM5	TARBP2	0.933	1
THEM5	TCP11	0.933	1
ZFP36L1	20q-Amp	0.933	1
ZFP36L1	Amp_11q14.1	0.933	1
ABCA8	Del_1p22.1	0.933	1
AKD1	Amp_6p23	0.933	1
ANKRD12	16q-Del	0.933	1
CCL13	Del_4q35.1	0.933	1
GPRIN2	ICOSLG	0.933	1
GPRIN2	MLC1	0.933	1
GPRIN2	OR6C76	0.933	1
GPRIN2	CCDC82	0.933	1
GPRIN2	CEP57	0.933	1
GPRIN2	CXCR3	0.933	1
GPRIN2	TCP11	0.933	1
GYG2	Amp_13q34	0.933	1
ICOSLG	PPEF1	0.933	1
ICOSLG	ZNF41	0.933	1
ICOSLG	FGFR2	0.933	1
ICOSLG	IRS4	0.933	1
MLC1	PPEF1	0.933	1
MLC1	ZNF41	0.933	1
MLC1	FGFR2	0.933	1
MLC1	IRS4	0.933	1
MLC1	ZNF687	0.933	1
NFE2L3	20q-Amp	0.933	1
OR6C76	PPEF1	0.933	1
OR6C76	ZNF41	0.933	1
OR6C76	FGFR2	0.933	1
OR6C76	IRS4	0.933	1
PPEF1	CABYR	0.933	1
PPEF1	CCDC82	0.933	1
PPEF1	CEP57	0.933	1
PPEF1	CXCR3	0.933	1
PRICKLE3	4p-Del	0.933	1
PRICKLE3	Amp_19p13.12	0.933	1
ZNF41	CABYR	0.933	1
ZNF41	CCDC82	0.933	1
ZNF41	CXCR3	0.933	1
ZNF41	RHOA	0.933	1
ZNF41	TCP11	0.933	1
ANGPT4	Amp_19p13.12	0.933	1
CABYR	FGFR2	0.933	1
CABYR	IRS4	0.933	1
CABYR	ZNF687	0.933	1
CCDC82	FGFR2	0.933	1
CCDC82	IRS4	0.933	1
CEP57	FGFR2	0.933	1
CEP57	IRS4	0.933	1
CEP57	ZNF687	0.933	1
CXCR3	FGFR2	0.933	1
CXCR3	IRS4	0.933	1
CXCR3	ZNF687	0.933	1
EIF4A2	20q-Amp	0.933	1
FGFR2	TARBP2	0.933	1
FGFR2	TCP11	0.933	1
IRS4	RHOA	0.933	1
IRS4	TCP11	0.933	1
OXCT2	Del_4q35.1	0.933	1
PAX2	16q-Del	0.933	1
RHBG	Del_4q35.1	0.933	1
RHBG	Del_15q13.1	0.933	1
RHOA	ZNF687	0.933	1
RIBC1	16q-Del	0.933	1
TARBP2	ZNF687	0.933	1
TCP11	ZNF687	0.933	1
TTPAL	Del_4q35.1	0.933	1
ZBTB7C	Del_15q13.1	0.933	1
ZNF362	Del_4q35.1	0.933	1
14q-Del	16q-Del	0.933	1
16q-Del	Del_12q23.1	0.933	1
8p-Del	Del_1p22.1	0.933	1
Amp_17q12	Del_12q23.1	0.933	1
Amp_19q12	Del_8p23.2	0.933	1
Del_12q24.31	Del_22q13.32	0.933	1
AQP12A	4q-Del	0.934	1
CBFB	AKD1	0.934	1
EPDR1	WSCD2	0.934	1
EPDR1	CASZ1	0.934	1
EPDR1	MLL4	0.934	1
FOXA1	AKD1	0.934	1
PTPN22	Amp_1q44	0.934	1
RB1	Del_14q24.1	0.934	1
TBL1XR1	Amp_1q44	0.934	1
THEM5	Del_9p21.3	0.934	1
WSCD2	DLX6	0.934	1
WSCD2	FBXO17	0.934	1
WSCD2	FXYD5	0.934	1
WSCD2	SHISA4	0.934	1
WSCD2	AKT2	0.934	1
WSCD2	CDC42EP1	0.934	1
WSCD2	NBPF9	0.934	1
DLX6	CASZ1	0.934	1
DLX6	DLG1	0.934	1
DNAH12	Del_10q26.3	0.934	1
FBXO17	DLG1	0.934	1
FHOD3	Del_9q34.2	0.934	1
FXYD5	CASZ1	0.934	1
FXYD5	DLG1	0.934	1
MLC1	4q-Del	0.934	1
MYH9	Del_10q26.3	0.934	1
PRICKLE3	Amp_1q44	0.934	1
SHISA4	CASZ1	0.934	1
SHISA4	DLG1	0.934	1
SHISA4	MLL4	0.934	1
UBC	Del_9q34.2	0.934	1
WDR52	Del_10q26.3	0.934	1
AKT2	CASZ1	0.934	1
AKT2	DLG1	0.934	1
AKT2	MLL4	0.934	1
ANGPT4	Amp_1q44	0.934	1
ATHL1	13q-Del	0.934	1
CASZ1	CDC42EP1	0.934	1
CASZ1	MKL1	0.934	1
CASZ1	NBPF9	0.934	1
CCDC82	4q-Del	0.934	1
CDC42EP1	MLL4	0.934	1
CEP57	4q-Del	0.934	1
DLG1	NBPF9	0.934	1
FGFR2	Del_3p21.31	0.934	1
MLL4	NBPF9	0.934	1
TARBP2	4q-Del	0.934	1
TCP11	4q-Del	0.934	1
1q-Amp	Del_12q23.1	0.934	1
20q-Amp	Amp_19q12	0.934	1
Amp_1p22.3	Del_10q23.31	0.934	1
Amp_4q13.3	Amp_11p13	0.934	1
Amp_8p11.23	Del_5q11.2	0.934	1
Amp_8p11.21	Del_15q13.1	0.934	1
Amp_17q12	Del_18q23	0.934	1
APC	FAM20C	0.935	1
APC	RAB42	0.935	1
APC	CCL13	0.935	1
APC	OR2T35	0.935	1
APC	OXCT2	0.935	1
APC	PAX2	0.935	1
APC	TTPAL	0.935	1
APC	ZBTB7C	0.935	1
AQP12A	Del_9q21.11	0.935	1
ASB10	GRHL2	0.935	1
ASB10	GYG2	0.935	1
ASB10	MORN1	0.935	1
ASB10	C15orf39	0.935	1
ASB10	PSIP1	0.935	1
ASB10	SLC35B2	0.935	1
ASB10	TPP2	0.935	1
ASB10	USP36	0.935	1
CTCF	COL6A5	0.935	1
EPDR1	Amp_6p23	0.935	1
EPDR1	Del_16q24.3	0.935	1
FAM20C	SF3B1	0.935	1
FAM20C	DNAH12	0.935	1
FAM20C	MYH9	0.935	1
FAM20C	KDM6A	0.935	1
FAM86B1	GRHL2	0.935	1
FAM86B1	GYG2	0.935	1
FAM86B1	MORN1	0.935	1
FAM86B1	C15orf39	0.935	1
FAM86B1	PSIP1	0.935	1
FAM86B1	SLC35B2	0.935	1
FAM86B1	TPP2	0.935	1
FAM86B1	USP36	0.935	1
HIST1H3B	Del_16q24.3	0.935	1
HLA-DRB5	SF3B1	0.935	1
HLA-DRB5	DNAH12	0.935	1
HLA-DRB5	MYH9	0.935	1
HLA-DRB5	WDR52	0.935	1
KRAS	1q-Amp	0.935	1
MAP2K4	MLL3	0.935	1
MAP3K1	MLC1	0.935	1
MAP3K1	OR6C76	0.935	1
MAP3K1	CCDC82	0.935	1
MAP3K1	TARBP2	0.935	1
PIK3CA	RPGR	0.935	1
RAB42	SF3B1	0.935	1
RAB42	DNAH12	0.935	1
RAB42	MYH9	0.935	1
RAB42	WDR52	0.935	1
RAB42	KDM6A	0.935	1
SF3B1	CCL13	0.935	1
SF3B1	OR2T35	0.935	1
SF3B1	OXCT2	0.935	1
SF3B1	PAX2	0.935	1
SF3B1	RIBC1	0.935	1
SF3B1	TTPAL	0.935	1
SF3B1	ZBTB7C	0.935	1
SF3B1	ZNF362	0.935	1
TCP10	GRHL2	0.935	1
TCP10	MORN1	0.935	1
TCP10	C15orf39	0.935	1
TCP10	PSIP1	0.935	1
TCP10	SLC35B2	0.935	1
TCP10	TPP2	0.935	1
TCP10	USP36	0.935	1
ANKRD12	COL6A5	0.935	1
ATXN2	Del_4q35.1	0.935	1
CCL13	DNAH12	0.935	1
CCL13	MYH9	0.935	1
CCL13	WDR52	0.935	1
CCL13	KDM6A	0.935	1
COL6A5	TNRC6B	0.935	1
DLX6	Amp_6p23	0.935	1
DNAH12	OR2T35	0.935	1
DNAH12	XBP1	0.935	1
DNAH12	OXCT2	0.935	1
DNAH12	PAX2	0.935	1
DNAH12	TTPAL	0.935	1
DNAH12	ZNF362	0.935	1
DST	Amp_3p25.1	0.935	1
DST	Del_4p16.3	0.935	1
DST	Del_5q11.2	0.935	1
FXYD5	Del_16q24.3	0.935	1
GPRIN2	Amp_6p23	0.935	1
GPRIN2	Del_16q24.3	0.935	1
GRHL2	GYG2	0.935	1
GRHL2	MORN1	0.935	1
GRHL2	C15orf39	0.935	1
GRHL2	PSIP1	0.935	1
GRHL2	SLC35B2	0.935	1
GRHL2	TPP2	0.935	1
GRHL2	USP36	0.935	1
GYG2	MORN1	0.935	1
GYG2	C15orf39	0.935	1
GYG2	SLC35B2	0.935	1
GYG2	TPP2	0.935	1
GYG2	USP36	0.935	1
HLA-C	Del_19q13.32	0.935	1
ICOSLG	Amp_12p13.33	0.935	1
MORN1	C15orf39	0.935	1
MORN1	PSIP1	0.935	1
MORN1	SLC35B2	0.935	1
MYH9	OR2T35	0.935	1
MYH9	OXCT2	0.935	1
MYH9	PAX2	0.935	1
MYH9	TTPAL	0.935	1
MYH9	ZBTB7C	0.935	1
MYH9	ZNF362	0.935	1
OR2T35	WDR52	0.935	1
OR2T35	KDM6A	0.935	1
PPEF1	Amp_6p23	0.935	1
PRICKLE3	18p-Del	0.935	1
SHISA4	Amp_6p23	0.935	1
WDR52	OXCT2	0.935	1
WDR52	PAX2	0.935	1
WDR52	ZBTB7C	0.935	1
WDR52	ZNF362	0.935	1
AKT2	Del_16q24.3	0.935	1
ANGPT4	18p-Del	0.935	1
C15orf39	PSIP1	0.935	1
C15orf39	SLC35B2	0.935	1
C15orf39	TPP2	0.935	1
C15orf39	USP36	0.935	1
CDC42EP1	Amp_6p23	0.935	1
CXCR3	1q-Amp	0.935	1
EIF4A2	Del_19q13.32	0.935	1
KDM6A	OXCT2	0.935	1
KDM6A	PAX2	0.935	1
KDM6A	TTPAL	0.935	1
KDM6A	ZBTB7C	0.935	1
MKL1	Amp_6p23	0.935	1
MKL1	Del_16q24.3	0.935	1
MUC6	Del_4q35.1	0.935	1
NBPF9	Del_16q24.3	0.935	1
PSIP1	SLC35B2	0.935	1
PSIP1	TPP2	0.935	1
PSIP1	USP36	0.935	1
RBMX	Del_15q13.1	0.935	1
RHOA	1q-Amp	0.935	1
SLC35B2	TPP2	0.935	1
SLC35B2	USP36	0.935	1
SPEN	Del_12q24.31	0.935	1
TPP2	USP36	0.935	1
8p-Amp	Amp_12p13.33	0.935	1
11q-Del	Amp_19q12	0.935	1
17q-Del	1p-Del	0.935	1
18p-Del	1q-Del	0.935	1
1p-Del	Del_21q11.2	0.935	1
Amp_8p11.21	Del_19q13.32	0.935	1
Amp_11q13.3	Del_7p22.3	0.935	1
Amp_14q21.1	Del_21q11.2	0.935	1
Del_7q36.1	Del_9p21.3	0.935	1
AARS	C1QTNF5	0.936	1
AARS	ZFP36L2	0.936	1
AARS	ANKRD20A4	0.936	1
C1QTNF5	VCPIP1	0.936	1
C1QTNF5	ZFP36L1	0.936	1
C1QTNF5	HLA-C	0.936	1
C1QTNF5	NFE2L3	0.936	1
C1QTNF5	EIF4A2	0.936	1
C1QTNF5	KCNN3	0.936	1
FBXW7	TBX3	0.936	1
GPS2	11q-Del	0.936	1
MYB	DST	0.936	1
PIK3R1	TBX3	0.936	1
PIK3R1	Del_1p36.13	0.936	1
PTHLH	VCPIP1	0.936	1
PTHLH	ZFP36L1	0.936	1
PTHLH	HLA-C	0.936	1
PTHLH	EIF4A2	0.936	1
PTHLH	KCNN3	0.936	1
PTPN22	8p-Amp	0.936	1
SMAD2	ZFP36L1	0.936	1
SMAD2	HLA-C	0.936	1
SMAD2	NFE2L3	0.936	1
SMAD2	EIF4A2	0.936	1
SMAD2	KCNN3	0.936	1
SMAD4	ZFP36L1	0.936	1
SMAD4	HLA-C	0.936	1
SMAD4	KCNN3	0.936	1
VCPIP1	ATXN7L1	0.936	1
VCPIP1	ANKRD20A4	0.936	1
VCPIP1	MR1	0.936	1
VCPIP1	TFE3	0.936	1
ZFP36L1	ZFP36L2	0.936	1
ZFP36L1	ATXN7L1	0.936	1
ZFP36L1	CCNL2	0.936	1
ZFP36L1	OR4D10	0.936	1
ZFP36L1	ANKRD20A4	0.936	1
ZFP36L1	MR1	0.936	1
ZFP36L1	TFE3	0.936	1
ZFP36L2	HLA-C	0.936	1
ZFP36L2	NFE2L3	0.936	1
ZFP36L2	EIF4A2	0.936	1
ZFP36L2	KCNN3	0.936	1
ATXN7L1	KCNN3	0.936	1
CCNL2	HLA-C	0.936	1
CCNL2	KCNN3	0.936	1
HLA-C	OR4D10	0.936	1
HLA-C	ANKRD20A4	0.936	1
HLA-C	MR1	0.936	1
HLA-C	TFE3	0.936	1
HLA-C	Del_5q11.2	0.936	1
HRNR	Del_16q24.3	0.936	1
MYH9	Amp_1q21.3	0.936	1
NFE2L3	OR4D10	0.936	1
NFE2L3	ANKRD20A4	0.936	1
NFE2L3	TFE3	0.936	1
OR4D10	EIF4A2	0.936	1
OR4D10	KCNN3	0.936	1
WDR52	4p-Del	0.936	1
ANGPT4	18q-Del	0.936	1
ANKRD20A4	EIF4A2	0.936	1
ANKRD20A4	KCNN3	0.936	1
EIF4A2	TFE3	0.936	1
KCNN3	MR1	0.936	1
KCNN3	Del_5q11.2	0.936	1
KDM6A	Amp_1q21.3	0.936	1
MLL4	4q-Del	0.936	1
PCNXL2	SDC1	0.936	1
SPEN	18p-Del	0.936	1
20p-Amp	Amp_10q22.3	0.936	1
5p-Amp	Amp_14q21.1	0.936	1
7q-Amp	Del_9p21.3	0.936	1
1p-Del	Amp_11p13	0.936	1
Amp_1q44	Del_1p36.13	0.936	1
Amp_6p23	Del_3p21.31	0.936	1
Amp_10q22.3	Amp_12p13.33	0.936	1
Del_10q23.31	Del_17q21.31	0.936	1
AQP12A	14q-Del	0.937	1
AQP12A	17q-Del	0.937	1
ASB10	1p-Del	0.937	1
CBFB	8p-Amp	0.937	1
CDKN1B	Del_6q15	0.937	1
ERBB2	Del_9p21.3	0.937	1
FAM86B1	1p-Del	0.937	1
HIST1H2BC	17q-Del	0.937	1
HIST1H2BC	Del_21q11.2	0.937	1
HLA-DRB5	16p-Amp	0.937	1
PIK3R1	Amp_3q26.32	0.937	1
TBX3	5p-Amp	0.937	1
TCP10	Amp_8q24.21	0.937	1
WSCD2	HRNR	0.937	1
ATXN2	Del_20p13	0.937	1
CCL13	16p-Amp	0.937	1
GYG2	Amp_14q21.1	0.937	1
HRNR	DLG1	0.937	1
ICOSLG	Amp_19q12	0.937	1
MLC1	17q-Del	0.937	1
OR6C76	17q-Del	0.937	1
SPRR2B	Del_1p36.13	0.937	1
BCORL1	Amp_3q26.32	0.937	1
C15orf39	Amp_14q21.1	0.937	1
CABYR	Del_21q11.2	0.937	1
CCDC82	Del_21q11.2	0.937	1
CEP57	14q-Del	0.937	1
CEP57	17q-Del	0.937	1
CXCR3	Amp_19q12	0.937	1
CXCR3	Del_21q11.2	0.937	1
MUC6	Del_20p13	0.937	1
PAX2	16p-Amp	0.937	1
PSIP1	1p-Del	0.937	1
RBMX	15q-Del	0.937	1
SLC35B2	1p-Del	0.937	1
TARBP2	Amp_19q12	0.937	1
TCP11	Del_21q11.2	0.937	1
TPP2	1p-Del	0.937	1
TPP2	Amp_8q24.21	0.937	1
TTPAL	16p-Amp	0.937	1
USP36	Amp_14q21.1	0.937	1
ZBTB7C	16p-Amp	0.937	1
ZMYM3	15q-Del	0.937	1
ZNF362	16p-Amp	0.937	1
20q-Amp	Amp_10q22.3	0.937	1
8p-Amp	11p-Del	0.937	1
Amp_20q13.2	Del_22q13.32	0.937	1
Del_5q21.3	Del_11q23.3	0.937	1
Del_6q15	Del_15q13.1	0.937	1
CBFB	NCOR1	0.938	1
CBFB	17q-Amp	0.938	1
CBFB	Amp_4q13.3	0.938	1
CDKN1B	6q-Del	0.938	1
ERBB2	DOCK11	0.938	1
FAM86B1	Del_19p13.3	0.938	1
HLA-DRB5	Amp_11q14.1	0.938	1
MAP3K1	MLL4	0.938	1
PIWIL1	20p-Amp	0.938	1
RB1	PCNXL2	0.938	1
RPGR	20p-Amp	0.938	1
TCP10	Del_19p13.3	0.938	1
AKD1	Del_12q23.1	0.938	1
ANKRD12	Amp_13q34	0.938	1
CCL13	Amp_11q14.1	0.938	1
COL6A5	Amp_17q23.1	0.938	1
ERBB3	20p-Amp	0.938	1
GRHL2	Del_19p13.3	0.938	1
GYG2	Del_19p13.3	0.938	1
OR2T35	20q-Amp	0.938	1
XBP1	Amp_11q14.1	0.938	1
DLG1	Del_9q21.11	0.938	1
KCNN3	Del_1p22.1	0.938	1
KDM6A	18p-Del	0.938	1
OXCT2	20q-Amp	0.938	1
OXCT2	Amp_11q14.1	0.938	1
PAX2	Amp_11q14.1	0.938	1
PSIP1	Del_19p13.3	0.938	1
RHBG	20q-Amp	0.938	1
RHBG	Amp_11q14.1	0.938	1
RIBC1	20q-Amp	0.938	1
RIBC1	Amp_11q14.1	0.938	1
TTPAL	Amp_11q14.1	0.938	1
ZBTB7C	20q-Amp	0.938	1
ZMYM3	16q-Del	0.938	1
ZNF362	20q-Amp	0.938	1
ZNF362	Amp_11q14.1	0.938	1
1q-Amp	Amp_17q23.1	0.938	1
1p-Del	Del_10q23.31	0.938	1
22q-Del	Amp_11q13.3	0.938	1
Amp_11q13.3	Del_3p21.31	0.938	1
Amp_17q12	Amp_19q12	0.938	1
Amp_20q13.2	Del_6q27	0.938	1
ACTL6B	AQP12A	0.939	1
ACTL6B	HIST1H2BC	0.939	1
ACTL6B	KRAS	0.939	1
ACTL6B	ICOSLG	0.939	1
ACTL6B	MLC1	0.939	1
ACTL6B	OR6C76	0.939	1
ACTL6B	CABYR	0.939	1
ACTL6B	CCDC82	0.939	1
ACTL6B	CEP57	0.939	1
ACTL6B	CXCR3	0.939	1
ACTL6B	RHOA	0.939	1
ACTL6B	TARBP2	0.939	1
ACTL6B	TCP11	0.939	1
ACTL6B	Amp_10q22.3	0.939	1
AQP12A	CDKN1B	0.939	1
AQP12A	PTPN22	0.939	1
AQP12A	TBL1XR1	0.939	1
AQP12A	PRICKLE3	0.939	1
AQP12A	ANGPT4	0.939	1
AQP12A	ATHL1	0.939	1
AQP12A	1q-Del	0.939	1
AQP12A	Del_7q36.1	0.939	1
CASP8	EPDR1	0.939	1
CASP8	DLX6	0.939	1
CASP8	FXYD5	0.939	1
CASP8	SHISA4	0.939	1
CASP8	MKL1	0.939	1
CASP8	NBPF9	0.939	1
CDKN1B	HIST1H2BC	0.939	1
CDKN1B	KRAS	0.939	1
CDKN1B	ICOSLG	0.939	1
CDKN1B	MLC1	0.939	1
CDKN1B	OR6C76	0.939	1
CDKN1B	CABYR	0.939	1
CDKN1B	CEP57	0.939	1
CDKN1B	CXCR3	0.939	1
CDKN1B	TARBP2	0.939	1
EPDR1	MYB	0.939	1
EPDR1	FHOD3	0.939	1
EPDR1	UBC	0.939	1
EPDR1	FRMPD2	0.939	1
EPDR1	TGS1	0.939	1
EPDR1	Del_22q13.32	0.939	1
ERBB2	SDC1	0.939	1
FAM20C	FBXW7	0.939	1
FAM20C	PIK3R1	0.939	1
FAM20C	ABCA8	0.939	1
FAM20C	BCORL1	0.939	1
FBXW7	RAB42	0.939	1
FBXW7	CCL13	0.939	1
FBXW7	OR2T35	0.939	1
FBXW7	XBP1	0.939	1
FBXW7	OXCT2	0.939	1
FBXW7	PAX2	0.939	1
FBXW7	TTPAL	0.939	1
FBXW7	ZBTB7C	0.939	1
FBXW7	ZNF362	0.939	1
HIST1H2BC	PTPN22	0.939	1
HIST1H2BC	TBL1XR1	0.939	1
HIST1H2BC	PRICKLE3	0.939	1
HIST1H2BC	ANGPT4	0.939	1
HIST1H2BC	ATHL1	0.939	1
HIST1H2BC	1q-Del	0.939	1
HLA-DRB5	PIK3R1	0.939	1
HLA-DRB5	ABCA8	0.939	1
HLA-DRB5	BCORL1	0.939	1
KRAS	PTPN22	0.939	1
KRAS	TBL1XR1	0.939	1
KRAS	PRICKLE3	0.939	1
KRAS	ANGPT4	0.939	1
KRAS	ATHL1	0.939	1
KRAS	1q-Del	0.939	1
MYB	DLX6	0.939	1
MYB	FBXO17	0.939	1
MYB	FXYD5	0.939	1
MYB	SHISA4	0.939	1
MYB	CDC42EP1	0.939	1
MYB	MKL1	0.939	1
MYB	NBPF9	0.939	1
PIK3R1	RAB42	0.939	1
PIK3R1	CCL13	0.939	1
PIK3R1	OR2T35	0.939	1
PIK3R1	XBP1	0.939	1
PIK3R1	OXCT2	0.939	1
PIK3R1	PAX2	0.939	1
PIK3R1	TTPAL	0.939	1
PIK3R1	ZBTB7C	0.939	1
PIK3R1	ZNF362	0.939	1
PTPN22	ICOSLG	0.939	1
PTPN22	MLC1	0.939	1
PTPN22	OR6C76	0.939	1
PTPN22	CABYR	0.939	1
PTPN22	CEP57	0.939	1
PTPN22	CXCR3	0.939	1
RAB42	ABCA8	0.939	1
RAB42	BCORL1	0.939	1
RB1	Del_9q34.2	0.939	1
TBL1XR1	ICOSLG	0.939	1
TBL1XR1	OR6C76	0.939	1
TBL1XR1	CABYR	0.939	1
TBL1XR1	CEP57	0.939	1
TBL1XR1	CXCR3	0.939	1
TBL1XR1	RHOA	0.939	1
TBL1XR1	TARBP2	0.939	1
TBL1XR1	TCP11	0.939	1
TCP10	Del_12q24.31	0.939	1
WSCD2	Del_16q24.3	0.939	1
ABCA8	CCL13	0.939	1
ABCA8	OR2T35	0.939	1
ABCA8	OXCT2	0.939	1
ABCA8	PAX2	0.939	1
ABCA8	TTPAL	0.939	1
ABCA8	ZBTB7C	0.939	1
ABCA8	ZNF362	0.939	1
CCL13	BCORL1	0.939	1
DLX6	FHOD3	0.939	1
DLX6	UBC	0.939	1
DLX6	FRMPD2	0.939	1
DLX6	TGS1	0.939	1
DLX6	Del_22q13.32	0.939	1
DNAH12	Amp_17q23.1	0.939	1
FBXO17	FHOD3	0.939	1
FBXO17	FRMPD2	0.939	1
FHOD3	FXYD5	0.939	1
FHOD3	AKT2	0.939	1
FHOD3	MKL1	0.939	1
FHOD3	NBPF9	0.939	1
FXYD5	UBC	0.939	1
FXYD5	FRMPD2	0.939	1
GRHL2	Del_12q23.1	0.939	1
HRNR	Del_7q36.1	0.939	1
ICOSLG	PRICKLE3	0.939	1
ICOSLG	ANGPT4	0.939	1
ICOSLG	ATHL1	0.939	1
ICOSLG	1q-Del	0.939	1
ICOSLG	Del_7q36.1	0.939	1
MLC1	PRICKLE3	0.939	1
MLC1	ANGPT4	0.939	1
MLC1	ATHL1	0.939	1
MLC1	1q-Del	0.939	1
MLC1	Del_7q36.1	0.939	1
MORN1	Del_12q23.1	0.939	1
MORN1	Del_12q24.31	0.939	1
OR2T35	BCORL1	0.939	1
OR6C76	ANGPT4	0.939	1
OR6C76	ATHL1	0.939	1
OR6C76	1q-Del	0.939	1
OR6C76	Amp_12q15	0.939	1
PPEF1	16p-Del	0.939	1
PRICKLE3	CABYR	0.939	1
PRICKLE3	CCDC82	0.939	1
PRICKLE3	CEP57	0.939	1
PRICKLE3	CXCR3	0.939	1
PRICKLE3	RHOA	0.939	1
PRICKLE3	TARBP2	0.939	1
PRICKLE3	TCP11	0.939	1
PRICKLE3	Amp_10q22.3	0.939	1
SHISA4	UBC	0.939	1
SHISA4	FRMPD2	0.939	1
SHISA4	TGS1	0.939	1
UBC	AKT2	0.939	1
UBC	MKL1	0.939	1
UBC	NBPF9	0.939	1
WDR52	Amp_17q23.1	0.939	1
XBP1	BCORL1	0.939	1
AKT2	FRMPD2	0.939	1
AKT2	TGS1	0.939	1
ANGPT4	CABYR	0.939	1
ANGPT4	CCDC82	0.939	1
ANGPT4	CEP57	0.939	1
ANGPT4	CXCR3	0.939	1
ANGPT4	TARBP2	0.939	1
ANGPT4	TCP11	0.939	1
ANGPT4	Amp_10q22.3	0.939	1
ATHL1	CABYR	0.939	1
ATHL1	CCDC82	0.939	1
ATHL1	CEP57	0.939	1
ATHL1	CXCR3	0.939	1
ATHL1	RHOA	0.939	1
ATHL1	TARBP2	0.939	1
ATHL1	TCP11	0.939	1
ATHL1	Amp_10q22.3	0.939	1
BCORL1	OXCT2	0.939	1
BCORL1	PAX2	0.939	1
BCORL1	RIBC1	0.939	1
BCORL1	TTPAL	0.939	1
BCORL1	ZBTB7C	0.939	1
BCORL1	ZNF362	0.939	1
C15orf39	Del_12q23.1	0.939	1
CCDC82	1q-Del	0.939	1
CCDC82	Amp_12q15	0.939	1
CCDC82	Del_7q36.1	0.939	1
CDC42EP1	FRMPD2	0.939	1
CDC42EP1	Del_22q13.32	0.939	1
CEP57	1q-Del	0.939	1
CXCR3	1q-Del	0.939	1
CXCR3	Amp_12q15	0.939	1
DOCK11	SDC1	0.939	1
FRMPD2	MKL1	0.939	1
FRMPD2	NBPF9	0.939	1
NBPF9	TGS1	0.939	1
RHOA	1q-Del	0.939	1
RHOA	Del_7q36.1	0.939	1
SLC35B2	Del_12q24.31	0.939	1
TARBP2	1q-Del	0.939	1
TCP11	1q-Del	0.939	1
TCP11	Amp_12q15	0.939	1
TPP2	Del_12q23.1	0.939	1
7p-Amp	Del_4q35.1	0.939	1
7q-Amp	Del_19p13.3	0.939	1
4q-Del	Amp_4q13.3	0.939	1
Amp_10p15.1	Del_12p13.1	0.939	1
Amp_13q34	Del_8p23.2	0.939	1
Amp_19p13.12	Amp_20q13.2	0.939	1
Del_2q37.3	Del_7p22.3	0.939	1
AQP12A	MLL3	0.94	1
CBFB	TAF1L	0.94	1
CBFB	ERBB3	0.94	1
CDKN1B	Amp_1q21.3	0.94	1
FAM20C	Del_4p16.3	0.94	1
FAM20C	Del_5q11.2	0.94	1
FOXA1	PIWIL1	0.94	1
FOXA1	RPGR	0.94	1
FOXA1	TAF1L	0.94	1
KRAS	MLL3	0.94	1
MLL3	MLC1	0.94	1
MLL3	OR6C76	0.94	1
MLL3	CXCR3	0.94	1
MLL3	RHOA	0.94	1
PIK3R1	8p-Del	0.94	1
RUNX1	ZMYM3	0.94	1
TCP10	Del_22q13.32	0.94	1
TP53	C15orf39	0.94	1
VCPIP1	Del_7p22.3	0.94	1
ZFP36L1	Amp_3p25.1	0.94	1
ZFP36L2	5q-Del	0.94	1
ATXN7L1	5q-Del	0.94	1
DLX6	Amp_8p11.21	0.94	1
FHOD3	Del_6p25.3	0.94	1
HLA-C	Amp_3p25.1	0.94	1
HLA-C	Del_7p22.3	0.94	1
OR2T35	Del_5q11.2	0.94	1
PRICKLE3	Amp_1q21.3	0.94	1
AKT2	Amp_8p11.21	0.94	1
ANGPT4	17p-Del	0.94	1
BCORL1	8p-Del	0.94	1
C15orf39	Del_22q13.32	0.94	1
CDC42EP1	Amp_8p11.21	0.94	1
KDM6A	18q-Del	0.94	1
MUC6	16p-Amp	0.94	1
NBPF9	Amp_8p11.21	0.94	1
PAX2	Del_4p16.3	0.94	1
PSIP1	Amp_1q44	0.94	1
TFE3	5q-Del	0.94	1
TGS1	Del_18q23	0.94	1
TNRC6B	Del_18q23	0.94	1
TPP2	Amp_1q44	0.94	1
USP36	Amp_1q44	0.94	1
USP36	Del_22q13.32	0.94	1
ZMYM3	16p-Amp	0.94	1
ZNF362	Del_4p16.3	0.94	1
16p-Amp	Amp_13q34	0.94	1
20p-Amp	Del_6q15	0.94	1
7q-Amp	Amp_12p13.33	0.94	1
13q-Del	Amp_15q26.3	0.94	1
Amp_11q14.1	Del_7q36.1	0.94	1
Amp_12p13.33	Del_22q13.32	0.94	1
ACTL6B	NCOR1	0.941	1
CDH1	HLA-DRB5	0.941	1
CDH1	CCL13	0.941	1
CDH1	RHBG	0.941	1
CDH1	RIBC1	0.941	1
CDH1	ZBTB7C	0.941	1
CDKN1B	NCOR1	0.941	1
CDKN1B	17q-Amp	0.941	1
CDKN1B	Amp_4q13.3	0.941	1
FAM20C	Del_1p22.1	0.941	1
FAM86B1	Amp_8p11.21	0.941	1
FAM86B1	Del_14q24.1	0.941	1
MYB	PIK3CA	0.941	1
PIK3CA	FRMPD2	0.941	1
RAB42	Del_1p22.1	0.941	1
TCP10	Amp_8p11.21	0.941	1
ABCA8	NF1	0.941	1
CCL13	Del_1p22.1	0.941	1
GYG2	Amp_8p11.21	0.941	1
ICOSLG	13q-Del	0.941	1
NFE2L3	Amp_3q26.32	0.941	1
PRICKLE3	17q-Amp	0.941	1
SHISA4	Amp_20q13.2	0.941	1
SPRR2B	Del_3p21.31	0.941	1
ANGPT4	Amp_4q13.3	0.941	1
ATHL1	17q-Amp	0.941	1
EIF4A2	Amp_3q26.32	0.941	1
MKL1	Amp_20q13.2	0.941	1
MLL4	7q-Amp	0.941	1
OXCT2	Del_1p22.1	0.941	1
PAX2	Del_1p22.1	0.941	1
PSIP1	Del_11p15.5	0.941	1
PSIP1	Del_14q24.1	0.941	1
RHOA	13q-Del	0.941	1
SDC1	Del_3p21.31	0.941	1
SLC35B2	Del_14q24.1	0.941	1
TARBP2	13q-Del	0.941	1
USP36	Amp_8p11.21	0.941	1
USP36	Del_14q24.1	0.941	1
17q-Amp	1q-Del	0.941	1
8p-Amp	Del_21q11.2	0.941	1
4q-Del	Amp_19q12	0.941	1
6q-Del	Del_4p16.3	0.941	1
Amp_6p23	Del_9p23	0.941	1
Amp_8p11.21	Del_10q26.3	0.941	1
Amp_11q13.3	Del_19p13.3	0.941	1
Amp_11q14.1	Del_16q24.3	0.941	1
Amp_17q12	Del_4p16.3	0.941	1
AARS	Amp_1p22.3	0.942	1
APC	Amp_11p13	0.942	1
ERBB2	Del_12p13.1	0.942	1
MAP2K4	7p-Amp	0.942	1
PIK3R1	Del_3p21.31	0.942	1
PIK3R1	Del_9p21.3	0.942	1
PTEN	THEM5	0.942	1
PTEN	GPRIN2	0.942	1
PTEN	ZNF41	0.942	1
PTEN	FGFR2	0.942	1
PTEN	11q-Del	0.942	1
RB1	SDC1	0.942	1
SF3B1	COL6A5	0.942	1
SF3B1	Amp_11p13	0.942	1
WSCD2	Del_7q36.1	0.942	1
ZFP36L1	Amp_1p22.3	0.942	1
ABCA8	Del_3p21.31	0.942	1
ANKRD12	Del_17q21.31	0.942	1
ATXN2	20q-Amp	0.942	1
COL6A5	DNAH12	0.942	1
DNAH12	Amp_11p13	0.942	1
ERBB3	Del_17q21.31	0.942	1
FBXO17	8p-Del	0.942	1
HLA-C	Amp_1p22.3	0.942	1
SHISA4	8p-Del	0.942	1
UBC	Del_17q21.31	0.942	1
WDR52	5p-Amp	0.942	1
DLG1	Del_7q36.1	0.942	1
NBPF9	8p-Del	0.942	1
TGS1	Del_17q21.31	0.942	1
USP36	Del_17p12	0.942	1
8p-Amp	18p-Del	0.942	1
1p-Del	Del_10q26.3	0.942	1
Amp_4q13.3	Amp_13q34	0.942	1
AQP12A	9q-Del	0.943	1
ARID1A	20q-Amp	0.943	1
ASB10	C1QTNF5	0.943	1
ASB10	PTHLH	0.943	1
ASB10	SMAD4	0.943	1
ASB10	ZFP36L2	0.943	1
ASB10	ATXN7L1	0.943	1
ASB10	CCNL2	0.943	1
ASB10	OR4D10	0.943	1
ASB10	ANKRD20A4	0.943	1
ASB10	MR1	0.943	1
ASB10	TFE3	0.943	1
C1QTNF5	FAM86B1	0.943	1
C1QTNF5	TCP10	0.943	1
C1QTNF5	GRHL2	0.943	1
C1QTNF5	GYG2	0.943	1
C1QTNF5	MORN1	0.943	1
C1QTNF5	C15orf39	0.943	1
C1QTNF5	PSIP1	0.943	1
C1QTNF5	TPP2	0.943	1
C1QTNF5	USP36	0.943	1
FAM20C	ATXN2	0.943	1
FAM20C	MED23	0.943	1
FAM20C	MUC6	0.943	1
FAM20C	RBMX	0.943	1
FAM20C	ZMYM3	0.943	1
FAM20C	Amp_3q26.32	0.943	1
FAM86B1	PTHLH	0.943	1
FAM86B1	SMAD2	0.943	1
FAM86B1	SMAD4	0.943	1
FAM86B1	ZFP36L2	0.943	1
FAM86B1	ATXN7L1	0.943	1
FAM86B1	CCNL2	0.943	1
FAM86B1	OR4D10	0.943	1
FAM86B1	ANKRD20A4	0.943	1
FAM86B1	MR1	0.943	1
FAM86B1	TFE3	0.943	1
HIST1H2BC	15q-Del	0.943	1
HLA-DRB5	ATXN2	0.943	1
HLA-DRB5	MED23	0.943	1
HLA-DRB5	RBMX	0.943	1
HLA-DRB5	ZMYM3	0.943	1
MAP2K4	UBC	0.943	1
MAP2K4	TGS1	0.943	1
PTHLH	TCP10	0.943	1
PTHLH	GRHL2	0.943	1
PTHLH	GYG2	0.943	1
PTHLH	MORN1	0.943	1
PTHLH	C15orf39	0.943	1
PTHLH	PSIP1	0.943	1
PTHLH	SLC35B2	0.943	1
PTHLH	TPP2	0.943	1
PTHLH	USP36	0.943	1
RAB42	ATXN2	0.943	1
RAB42	MED23	0.943	1
RAB42	MUC6	0.943	1
RAB42	RBMX	0.943	1
RAB42	ZMYM3	0.943	1
RAB42	Amp_3q26.32	0.943	1
SMAD2	TCP10	0.943	1
SMAD2	GYG2	0.943	1
SMAD2	MORN1	0.943	1
SMAD2	C15orf39	0.943	1
SMAD2	PSIP1	0.943	1
SMAD2	SLC35B2	0.943	1
SMAD2	USP36	0.943	1
SMAD4	TCP10	0.943	1
SMAD4	GRHL2	0.943	1
SMAD4	C15orf39	0.943	1
SMAD4	SLC35B2	0.943	1
SMAD4	TPP2	0.943	1
SMAD4	USP36	0.943	1
TCP10	ZFP36L2	0.943	1
TCP10	ATXN7L1	0.943	1
TCP10	CCNL2	0.943	1
TCP10	OR4D10	0.943	1
TCP10	ANKRD20A4	0.943	1
TCP10	MR1	0.943	1
TCP10	TFE3	0.943	1
TCP10	Amp_20q13.2	0.943	1
ZFP36L2	GRHL2	0.943	1
ZFP36L2	GYG2	0.943	1
ZFP36L2	MORN1	0.943	1
ZFP36L2	C15orf39	0.943	1
ZFP36L2	PSIP1	0.943	1
ZFP36L2	SLC35B2	0.943	1
ZFP36L2	TPP2	0.943	1
ZFP36L2	USP36	0.943	1
ABCA8	Del_16q24.3	0.943	1
AKD1	Del_19p13.3	0.943	1
ATXN2	CCL13	0.943	1
ATXN2	OR2T35	0.943	1
ATXN2	OXCT2	0.943	1
ATXN2	PAX2	0.943	1
ATXN2	TTPAL	0.943	1
ATXN2	ZBTB7C	0.943	1
ATXN7L1	GRHL2	0.943	1
ATXN7L1	MORN1	0.943	1
ATXN7L1	SLC35B2	0.943	1
ATXN7L1	TPP2	0.943	1
ATXN7L1	USP36	0.943	1
CCL13	MED23	0.943	1
CCL13	MUC6	0.943	1
CCL13	RBMX	0.943	1
CCL13	ZMYM3	0.943	1
CCNL2	GRHL2	0.943	1
CCNL2	C15orf39	0.943	1
CCNL2	SLC35B2	0.943	1
CCNL2	TPP2	0.943	1
CCNL2	USP36	0.943	1
COL6A5	16p-Del	0.943	1
DLX6	Del_2q37.3	0.943	1
DNAH12	17p-Del	0.943	1
DST	Amp_3q26.32	0.943	1
FXYD5	Del_2q37.3	0.943	1
GRHL2	ANKRD20A4	0.943	1
GRHL2	MR1	0.943	1
GRHL2	TFE3	0.943	1
GYG2	OR4D10	0.943	1
GYG2	ANKRD20A4	0.943	1
GYG2	TFE3	0.943	1
ICOSLG	9q-Del	0.943	1
MLC1	15q-Del	0.943	1
MORN1	OR4D10	0.943	1
MORN1	ANKRD20A4	0.943	1
OR2T35	MUC6	0.943	1
OR2T35	RBMX	0.943	1
OR2T35	ZMYM3	0.943	1
OR4D10	C15orf39	0.943	1
OR4D10	PSIP1	0.943	1
OR4D10	SLC35B2	0.943	1
OR4D10	USP36	0.943	1
SHISA4	Del_2q37.3	0.943	1
XBP1	MED23	0.943	1
XBP1	RBMX	0.943	1
XBP1	ZMYM3	0.943	1
AKT2	Del_2q37.3	0.943	1
ANKRD20A4	C15orf39	0.943	1
ANKRD20A4	SLC35B2	0.943	1
ANKRD20A4	TPP2	0.943	1
ANKRD20A4	USP36	0.943	1
ATHL1	Del_13q14.2	0.943	1
C15orf39	MR1	0.943	1
CABYR	9q-Del	0.943	1
CABYR	Del_20p13	0.943	1
CCDC82	9q-Del	0.943	1
CCDC82	Del_20p13	0.943	1
CEP57	9q-Del	0.943	1
MED23	OXCT2	0.943	1
MED23	PAX2	0.943	1
MED23	RHBG	0.943	1
MED23	RIBC1	0.943	1
MED23	TTPAL	0.943	1
MR1	SLC35B2	0.943	1
MUC6	PAX2	0.943	1
MUC6	TTPAL	0.943	1
MUC6	ZBTB7C	0.943	1
MUC6	ZNF362	0.943	1
OXCT2	RBMX	0.943	1
OXCT2	ZMYM3	0.943	1
PAX2	RBMX	0.943	1
PAX2	Amp_3q26.32	0.943	1
RBMX	RHBG	0.943	1
RBMX	TTPAL	0.943	1
RBMX	ZBTB7C	0.943	1
RBMX	ZNF362	0.943	1
RHBG	Amp_3q26.32	0.943	1
SLC35B2	TFE3	0.943	1
TFE3	TPP2	0.943	1
TFE3	USP36	0.943	1
TPP2	Amp_20q13.2	0.943	1
TTPAL	ZMYM3	0.943	1
ZBTB7C	ZMYM3	0.943	1
ZNF362	Amp_3q26.32	0.943	1
20p-Amp	Amp_4q13.3	0.943	1
7q-Amp	Amp_19q12	0.943	1
11p-Del	Amp_13q34	0.943	1
1q-Del	Del_13q14.2	0.943	1
22q-Del	Amp_20q13.2	0.943	1
Amp_1q21.3	Del_18q23	0.943	1
Amp_1q44	Del_7q36.1	0.943	1
Amp_1q44	Del_13q14.2	0.943	1
Amp_4q13.3	Amp_12p13.33	0.943	1
Amp_8p11.21	Amp_12p13.33	0.943	1
ARID1A	Amp_11p13	0.944	1
ARID1A	Amp_19q13.42	0.944	1
C1QTNF5	17p-Del	0.944	1
C1QTNF5	Amp_19q13.42	0.944	1
EPDR1	GPS2	0.944	1
EPDR1	HIST1H3B	0.944	1
EPDR1	THEM5	0.944	1
EPDR1	GPRIN2	0.944	1
EPDR1	PPEF1	0.944	1
EPDR1	FGFR2	0.944	1
EPDR1	ZNF687	0.944	1
GPS2	DLX6	0.944	1
GPS2	FBXO17	0.944	1
GPS2	FXYD5	0.944	1
GPS2	SHISA4	0.944	1
GPS2	AKT2	0.944	1
GPS2	CDC42EP1	0.944	1
GPS2	MKL1	0.944	1
GPS2	NBPF9	0.944	1
HIST1H3B	DLX6	0.944	1
HIST1H3B	FBXO17	0.944	1
HIST1H3B	SHISA4	0.944	1
HIST1H3B	AKT2	0.944	1
HIST1H3B	CDC42EP1	0.944	1
HIST1H3B	NBPF9	0.944	1
MLL3	CASZ1	0.944	1
MLL3	DLG1	0.944	1
MLL3	MLL4	0.944	1
MLL3	1q-Amp	0.944	1
PIWIL1	Amp_14q21.1	0.944	1
PTHLH	5p-Amp	0.944	1
PTHLH	Amp_11p13	0.944	1
PTHLH	Amp_19q13.42	0.944	1
RAB42	Amp_1p22.3	0.944	1
RB1	Del_4q35.1	0.944	1
SMAD2	Amp_11p13	0.944	1
SMAD4	5p-Amp	0.944	1
SMAD4	17p-Del	0.944	1
TAF1L	Amp_14q21.1	0.944	1
TBX3	MED23	0.944	1
TBX3	RBMX	0.944	1
THEM5	DLX6	0.944	1
THEM5	FBXO17	0.944	1
THEM5	FXYD5	0.944	1
THEM5	SHISA4	0.944	1
THEM5	AKT2	0.944	1
THEM5	CDC42EP1	0.944	1
THEM5	MKL1	0.944	1
THEM5	NBPF9	0.944	1
ZFP36L2	Amp_19q13.42	0.944	1
ATXN7L1	5p-Amp	0.944	1
ATXN7L1	Amp_6q21	0.944	1
CCNL2	Amp_6q21	0.944	1
DLX6	GPRIN2	0.944	1
DLX6	PPEF1	0.944	1
DLX6	FGFR2	0.944	1
DLX6	IRS4	0.944	1
DLX6	ZNF687	0.944	1
FBXO17	GPRIN2	0.944	1
FBXO17	ZNF41	0.944	1
FBXO17	FGFR2	0.944	1
FBXO17	IRS4	0.944	1
FBXO17	ZNF687	0.944	1
FXYD5	GPRIN2	0.944	1
FXYD5	PPEF1	0.944	1
FXYD5	ZNF41	0.944	1
FXYD5	FGFR2	0.944	1
FXYD5	IRS4	0.944	1
FXYD5	ZNF687	0.944	1
GPRIN2	SHISA4	0.944	1
GPRIN2	AKT2	0.944	1
GPRIN2	CDC42EP1	0.944	1
GPRIN2	MKL1	0.944	1
GPRIN2	NBPF9	0.944	1
GYG2	8p-Del	0.944	1
HLA-C	Amp_10p15.1	0.944	1
OR4D10	17p-Del	0.944	1
OR4D10	Amp_6q21	0.944	1
OR4D10	Amp_11p13	0.944	1
PPEF1	SHISA4	0.944	1
PPEF1	AKT2	0.944	1
PPEF1	CDC42EP1	0.944	1
PPEF1	MKL1	0.944	1
PPEF1	NBPF9	0.944	1
SHISA4	ZNF41	0.944	1
SHISA4	FGFR2	0.944	1
UBC	Del_12p13.1	0.944	1
ZNF41	AKT2	0.944	1
ZNF41	MKL1	0.944	1
ZNF41	NBPF9	0.944	1
AKT2	FGFR2	0.944	1
AKT2	IRS4	0.944	1
AKT2	ZNF687	0.944	1
ANKRD20A4	Amp_6q21	0.944	1
CDC42EP1	FGFR2	0.944	1
CDC42EP1	IRS4	0.944	1
CDC42EP1	ZNF687	0.944	1
FGFR2	MKL1	0.944	1
FGFR2	NBPF9	0.944	1
FRMPD2	Amp_17q23.1	0.944	1
IRS4	MKL1	0.944	1
IRS4	NBPF9	0.944	1
MKL1	ZNF687	0.944	1
NBPF9	ZNF687	0.944	1
RIBC1	Amp_1p22.3	0.944	1
TFE3	17p-Del	0.944	1
TFE3	Amp_6q21	0.944	1
TFE3	Amp_11p13	0.944	1
TFE3	Amp_19q13.42	0.944	1
TGS1	Del_12p13.1	0.944	1
USP36	8p-Del	0.944	1
ZBTB7C	Amp_1p22.3	0.944	1
16p-Del	Amp_17q23.1	0.944	1
18p-Del	Del_7p22.3	0.944	1
1p-Del	Del_4q35.1	0.944	1
Amp_4q13.3	Amp_11q14.1	0.944	1
Amp_11q13.3	Del_6p25.3	0.944	1
Amp_14q21.1	Del_4q35.1	0.944	1
AARS	AQP12A	0.945	1
AARS	HIST1H2BC	0.945	1
AARS	ICOSLG	0.945	1
AARS	MLC1	0.945	1
AARS	CABYR	0.945	1
AARS	CCDC82	0.945	1
AARS	CEP57	0.945	1
AARS	CXCR3	0.945	1
AARS	RHOA	0.945	1
AARS	TARBP2	0.945	1
AARS	TCP11	0.945	1
AQP12A	VCPIP1	0.945	1
AQP12A	ZFP36L1	0.945	1
AQP12A	NFE2L3	0.945	1
AQP12A	EIF4A2	0.945	1
AQP12A	KCNN3	0.945	1
CTCF	Amp_6p23	0.945	1
HIST1H2BC	VCPIP1	0.945	1
HIST1H2BC	ZFP36L1	0.945	1
HIST1H2BC	HLA-C	0.945	1
HIST1H2BC	NFE2L3	0.945	1
HIST1H2BC	EIF4A2	0.945	1
HIST1H2BC	KCNN3	0.945	1
HIST1H3B	DST	0.945	1
KRAS	VCPIP1	0.945	1
KRAS	ZFP36L1	0.945	1
KRAS	HLA-C	0.945	1
KRAS	NFE2L3	0.945	1
KRAS	EIF4A2	0.945	1
KRAS	KCNN3	0.945	1
VCPIP1	ICOSLG	0.945	1
VCPIP1	OR6C76	0.945	1
VCPIP1	CABYR	0.945	1
VCPIP1	CEP57	0.945	1
VCPIP1	CXCR3	0.945	1
VCPIP1	Amp_19p13.12	0.945	1
ZFP36L1	ICOSLG	0.945	1
ZFP36L1	MLC1	0.945	1
ZFP36L1	OR6C76	0.945	1
ZFP36L1	CABYR	0.945	1
ZFP36L1	CCDC82	0.945	1
ZFP36L1	CEP57	0.945	1
ZFP36L1	CXCR3	0.945	1
ZFP36L1	RHOA	0.945	1
ZFP36L1	TARBP2	0.945	1
ZFP36L1	TCP11	0.945	1
ABCA8	11q-Del	0.945	1
AKD1	SDC1	0.945	1
DLX6	11p-Del	0.945	1
DLX6	Del_9q34.2	0.945	1
DST	PPEF1	0.945	1
DST	FGFR2	0.945	1
DST	Del_9p23	0.945	1
HLA-C	ICOSLG	0.945	1
HLA-C	MLC1	0.945	1
HLA-C	OR6C76	0.945	1
HLA-C	CABYR	0.945	1
HLA-C	CCDC82	0.945	1
HLA-C	CEP57	0.945	1
HLA-C	CXCR3	0.945	1
HLA-C	RHOA	0.945	1
HLA-C	TARBP2	0.945	1
HLA-C	TCP11	0.945	1
ICOSLG	NFE2L3	0.945	1
ICOSLG	EIF4A2	0.945	1
ICOSLG	KCNN3	0.945	1
MLC1	NFE2L3	0.945	1
MLC1	EIF4A2	0.945	1
MLC1	KCNN3	0.945	1
MLC1	Del_11q23.3	0.945	1
NFE2L3	OR6C76	0.945	1
NFE2L3	CABYR	0.945	1
NFE2L3	CCDC82	0.945	1
NFE2L3	CEP57	0.945	1
NFE2L3	RHOA	0.945	1
NFE2L3	TARBP2	0.945	1
NFE2L3	TCP11	0.945	1
NFE2L3	Amp_19p13.12	0.945	1
OR2T35	Amp_10p15.1	0.945	1
OR6C76	KCNN3	0.945	1
PRICKLE3	20p-Amp	0.945	1
SHISA4	11p-Del	0.945	1
XBP1	Amp_10p15.1	0.945	1
ANGPT4	20p-Amp	0.945	1
CABYR	EIF4A2	0.945	1
CABYR	KCNN3	0.945	1
CCDC82	EIF4A2	0.945	1
CCDC82	KCNN3	0.945	1
CCDC82	Del_11q23.3	0.945	1
CEP57	EIF4A2	0.945	1
CEP57	KCNN3	0.945	1
CXCR3	EIF4A2	0.945	1
DOCK11	Del_4p16.3	0.945	1
EIF4A2	TARBP2	0.945	1
EIF4A2	TCP11	0.945	1
KCNN3	RHOA	0.945	1
KCNN3	TARBP2	0.945	1
KCNN3	TCP11	0.945	1
MLL4	1q-Amp	0.945	1
MUC6	Del_5q11.2	0.945	1
NBPF9	Del_9q34.2	0.945	1
RBMX	Del_4p16.3	0.945	1
Amp_10q22.3	Del_13q14.2	0.945	1
ACTL6B	Del_5q21.3	0.946	1
APC	CBFB	0.946	1
APC	FOXA1	0.946	1
ASB10	Amp_1q21.3	0.946	1
CBFB	DNAH12	0.946	1
FOXA1	SF3B1	0.946	1
FOXA1	WDR52	0.946	1
FOXA1	KDM6A	0.946	1
GATA3	ABCA8	0.946	1
GATA3	11q-Del	0.946	1
RPGR	Del_12q23.1	0.946	1
SMAD4	Del_13q14.2	0.946	1
TAF1L	Amp_17q12	0.946	1
THEM5	Del_2q37.3	0.946	1
FHOD3	HRNR	0.946	1
HRNR	TGS1	0.946	1
PRICKLE3	Del_5q21.3	0.946	1
UBC	Del_9p23	0.946	1
ZNF41	Del_22q13.32	0.946	1
ATHL1	Del_5q21.3	0.946	1
CASZ1	Amp_17q12	0.946	1
MLL4	Amp_17q12	0.946	1
ZNF687	Del_2q37.3	0.946	1
17q-Amp	Amp_19q12	0.946	1
8p-Amp	Amp_12q15	0.946	1
8q-Amp	Del_17p12	0.946	1
11p-Del	Amp_8p11.21	0.946	1
17p-Del	Amp_11q14.1	0.946	1
18q-Del	Amp_3p25.1	0.946	1
18q-Del	Amp_12q15	0.946	1
Amp_8p11.21	Amp_13q34	0.946	1
Amp_12p13.33	Del_1p36.13	0.946	1
ASB10	1q-Amp	0.947	1
ASB10	Del_4q35.1	0.947	1
CDH1	ATXN2	0.947	1
ERBB2	Del_1p22.1	0.947	1
FAM20C	WSCD2	0.947	1
FAM20C	CASZ1	0.947	1
FAM20C	DLG1	0.947	1
FAM20C	MLL4	0.947	1
FAM86B1	Del_15q13.1	0.947	1
GATA3	Amp_20q13.2	0.947	1
GPS2	16q-Del	0.947	1
HIST1H3B	11p-Del	0.947	1
HIST1H3B	16q-Del	0.947	1
HIST1H3B	Amp_8p11.21	0.947	1
HLA-DRB5	WSCD2	0.947	1
HLA-DRB5	DLG1	0.947	1
HLA-DRB5	MLL4	0.947	1
PTEN	COL6A5	0.947	1
PTEN	Amp_10q22.3	0.947	1
RAB42	WSCD2	0.947	1
RAB42	CASZ1	0.947	1
RAB42	DLG1	0.947	1
RAB42	MLL4	0.947	1
SF3B1	Amp_13q34	0.947	1
TCP10	Del_15q13.1	0.947	1
THEM5	Amp_8p11.21	0.947	1
WSCD2	CCL13	0.947	1
WSCD2	OR2T35	0.947	1
WSCD2	XBP1	0.947	1
WSCD2	OXCT2	0.947	1
WSCD2	PAX2	0.947	1
WSCD2	RIBC1	0.947	1
WSCD2	TTPAL	0.947	1
WSCD2	ZBTB7C	0.947	1
WSCD2	ZNF362	0.947	1
CCL13	CASZ1	0.947	1
CCL13	DLG1	0.947	1
CCL13	MLL4	0.947	1
COL6A5	Del_3p21.31	0.947	1
DNAH12	Amp_13q34	0.947	1
DST	Del_3p21.31	0.947	1
GYG2	1q-Amp	0.947	1
GYG2	Del_15q13.1	0.947	1
ICOSLG	Del_6q27	0.947	1
MLC1	16q-Del	0.947	1
MLC1	Del_6q27	0.947	1
MORN1	1q-Amp	0.947	1
NFE2L3	Del_10q23.31	0.947	1
OR2T35	CASZ1	0.947	1
OR2T35	DLG1	0.947	1
OR2T35	MLL4	0.947	1
OR2T35	Del_10q23.31	0.947	1
PPEF1	Del_9q34.2	0.947	1
XBP1	DLG1	0.947	1
ZNF41	16q-Del	0.947	1
CABYR	Del_6q27	0.947	1
CASZ1	PAX2	0.947	1
CASZ1	TTPAL	0.947	1
CASZ1	ZBTB7C	0.947	1
CASZ1	ZNF362	0.947	1
CCDC82	16q-Del	0.947	1
CEP57	16q-Del	0.947	1
CXCR3	16q-Del	0.947	1
DLG1	OXCT2	0.947	1
DLG1	PAX2	0.947	1
DLG1	RHBG	0.947	1
DLG1	RIBC1	0.947	1
DLG1	ZNF362	0.947	1
KCNN3	Del_10q23.31	0.947	1
MLL4	OXCT2	0.947	1
MLL4	PAX2	0.947	1
MLL4	RIBC1	0.947	1
MLL4	TTPAL	0.947	1
MLL4	ZBTB7C	0.947	1
MLL4	ZNF362	0.947	1
OXCT2	Del_10q23.31	0.947	1
PAX2	Del_10q23.31	0.947	1
PSIP1	1q-Amp	0.947	1
RHOA	16q-Del	0.947	1
SLC35B2	Del_4q35.1	0.947	1
TCP11	Del_6q27	0.947	1
TPP2	1q-Amp	0.947	1
USP36	1q-Amp	0.947	1
ZBTB7C	Del_10q23.31	0.947	1
ZMYM3	Del_1p22.1	0.947	1
5p-Amp	Del_14q24.1	0.947	1
16q-Del	Del_18q23	0.947	1
Amp_12q15	Del_5q11.2	0.947	1
Amp_12q15	Del_6q27	0.947	1
ARID1A	MAP2K4	0.948	1
ARID1A	ATXN2	0.948	1
ARID1A	MED23	0.948	1
ARID1A	RBMX	0.948	1
ASB10	Del_19q13.32	0.948	1
C1QTNF5	Amp_13q34	0.948	1
C1QTNF5	Del_18q23	0.948	1
CTCF	SPRR2B	0.948	1
CTCF	SDC1	0.948	1
FAM20C	Del_10q26.3	0.948	1
GATA3	PAX2	0.948	1
GATA3	ZBTB7C	0.948	1
MAP2K4	NF1	0.948	1
MLL3	Del_12q24.31	0.948	1
PIK3R1	4p-Del	0.948	1
PIWIL1	SPRR2B	0.948	1
PIWIL1	SDC1	0.948	1
RB1	Del_7p22.3	0.948	1
RPGR	SDC1	0.948	1
RUNX1	CASZ1	0.948	1
RUNX1	MLL4	0.948	1
SMAD2	Del_18q23	0.948	1
TAF1L	SDC1	0.948	1
TBX3	HRNR	0.948	1
ZFP36L1	9p-Del	0.948	1
ZFP36L2	Amp_13q34	0.948	1
ANKRD12	SDC1	0.948	1
CCNL2	Amp_13q34	0.948	1
CCNL2	Del_18q23	0.948	1
HLA-C	Del_10q26.3	0.948	1
HRNR	Del_20p13	0.948	1
PRICKLE3	Del_1p36.13	0.948	1
SPRR2B	TNRC6B	0.948	1
XBP1	Del_10q26.3	0.948	1
BCORL1	4p-Del	0.948	1
C15orf39	Del_19q13.32	0.948	1
EIF4A2	Del_10q26.3	0.948	1
KCNN3	9p-Del	0.948	1
KCNN3	Del_10q26.3	0.948	1
MED23	NF1	0.948	1
NF1	RBMX	0.948	1
OXCT2	9p-Del	0.948	1
OXCT2	Del_10q26.3	0.948	1
PAX2	Del_10q26.3	0.948	1
PSIP1	Del_19q13.32	0.948	1
SDC1	TNRC6B	0.948	1
SLC35B2	Del_19q13.32	0.948	1
TFE3	Amp_13q34	0.948	1
TPP2	Del_19q13.32	0.948	1
ZBTB7C	Del_10q26.3	0.948	1
ZNF362	9p-Del	0.948	1
5p-Amp	Del_5q21.3	0.948	1
18p-Del	Amp_14q21.1	0.948	1
18p-Del	Del_8p23.2	0.948	1
Amp_6p23	Del_20p13	0.948	1
Amp_11q14.1	Del_4p16.3	0.948	1
ACTL6B	EPDR1	0.949	1
ACTL6B	DLX6	0.949	1
ACTL6B	FBXO17	0.949	1
ACTL6B	FXYD5	0.949	1
ACTL6B	SHISA4	0.949	1
ACTL6B	AKT2	0.949	1
ACTL6B	CDC42EP1	0.949	1
ACTL6B	MKL1	0.949	1
C1QTNF5	Del_8p23.2	0.949	1
C1QTNF5	Del_17q21.31	0.949	1
CASP8	7q-Amp	0.949	1
CDKN1B	EPDR1	0.949	1
CDKN1B	DLX6	0.949	1
CDKN1B	FBXO17	0.949	1
CDKN1B	SHISA4	0.949	1
CDKN1B	AKT2	0.949	1
CDKN1B	CDC42EP1	0.949	1
CDKN1B	NBPF9	0.949	1
EPDR1	TBL1XR1	0.949	1
EPDR1	PRICKLE3	0.949	1
EPDR1	ANGPT4	0.949	1
EPDR1	ATHL1	0.949	1
EPDR1	1q-Del	0.949	1
FAM20C	4p-Del	0.949	1
FBXW7	COL6A5	0.949	1
PTPN22	DLX6	0.949	1
PTPN22	SHISA4	0.949	1
PTPN22	CDC42EP1	0.949	1
PTPN22	NBPF9	0.949	1
PTPN22	16p-Del	0.949	1
SMAD2	Del_17q21.31	0.949	1
TBL1XR1	DLX6	0.949	1
TBL1XR1	FBXO17	0.949	1
TBL1XR1	FXYD5	0.949	1
TBL1XR1	SHISA4	0.949	1
TBL1XR1	AKT2	0.949	1
TBL1XR1	CDC42EP1	0.949	1
TBL1XR1	MKL1	0.949	1
TBL1XR1	NBPF9	0.949	1
THEM5	Amp_20q13.2	0.949	1
VCPIP1	Amp_17q12	0.949	1
AKD1	DOCK11	0.949	1
CCNL2	Del_17q21.31	0.949	1
DLX6	PRICKLE3	0.949	1
DLX6	ANGPT4	0.949	1
DLX6	ATHL1	0.949	1
DLX6	1q-Del	0.949	1
FBXO17	PRICKLE3	0.949	1
FBXO17	ANGPT4	0.949	1
FBXO17	1q-Del	0.949	1
FHOD3	SPEN	0.949	1
FXYD5	PRICKLE3	0.949	1
FXYD5	ANGPT4	0.949	1
FXYD5	ATHL1	0.949	1
NFE2L3	Amp_17q12	0.949	1
PRICKLE3	SHISA4	0.949	1
PRICKLE3	AKT2	0.949	1
PRICKLE3	CDC42EP1	0.949	1
PRICKLE3	MKL1	0.949	1
SHISA4	ATHL1	0.949	1
SHISA4	1q-Del	0.949	1
UBC	SPEN	0.949	1
WDR52	20p-Amp	0.949	1
AKT2	ANGPT4	0.949	1
AKT2	ATHL1	0.949	1
AKT2	1q-Del	0.949	1
ANGPT4	CDC42EP1	0.949	1
ANGPT4	MKL1	0.949	1
ANGPT4	NBPF9	0.949	1
ANGPT4	Amp_6p23	0.949	1
ATHL1	CDC42EP1	0.949	1
ATHL1	MKL1	0.949	1
ATHL1	NBPF9	0.949	1
ATHL1	16p-Del	0.949	1
ATHL1	Amp_6p23	0.949	1
CDC42EP1	1q-Del	0.949	1
EIF4A2	Amp_17q12	0.949	1
KCNN3	Amp_17q12	0.949	1
MKL1	1q-Del	0.949	1
MKL1	Del_6p25.3	0.949	1
OXCT2	4p-Del	0.949	1
PAX2	4p-Del	0.949	1
ZNF362	4p-Del	0.949	1
17q-Amp	Amp_12q15	0.949	1
15q-Del	Amp_8p11.21	0.949	1
Amp_4q13.3	Del_11q23.3	0.949	1
Amp_11p13	Del_3p21.31	0.949	1
Del_6q15	Del_10q23.31	0.949	1
AQP12A	Amp_15q26.3	0.95	1
C1QTNF5	PTHLH	0.95	1
C1QTNF5	SMAD2	0.95	1
C1QTNF5	SMAD4	0.95	1
C1QTNF5	ZFP36L2	0.95	1
C1QTNF5	ATXN7L1	0.95	1
C1QTNF5	CCNL2	0.95	1
C1QTNF5	OR4D10	0.95	1
C1QTNF5	ANKRD20A4	0.95	1
C1QTNF5	MR1	0.95	1
C1QTNF5	TFE3	0.95	1
CASP8	MAP3K1	0.95	1
CDH1	NF1	0.95	1
HIST1H2BC	Amp_15q26.3	0.95	1
HIST1H3B	8p-Del	0.95	1
MAP3K1	MYB	0.95	1
MAP3K1	UBC	0.95	1
NCOR1	17p-Del	0.95	1
PIK3CA	ZMYM3	0.95	1
PIK3R1	18p-Del	0.95	1
PTHLH	SMAD4	0.95	1
PTHLH	ZFP36L2	0.95	1
PTHLH	CCNL2	0.95	1
PTHLH	ANKRD20A4	0.95	1
PTHLH	MR1	0.95	1
RB1	Amp_8q24.21	0.95	1
RB1	Del_3p21.31	0.95	1
RB1	Del_9p21.3	0.95	1
RPGR	Amp_11q13.3	0.95	1
SMAD2	SMAD4	0.95	1
SMAD2	ZFP36L2	0.95	1
SMAD2	CCNL2	0.95	1
SMAD2	ANKRD20A4	0.95	1
SMAD4	ZFP36L2	0.95	1
SMAD4	OR4D10	0.95	1
SMAD4	ANKRD20A4	0.95	1
SMAD4	TFE3	0.95	1
TCP10	7p-Amp	0.95	1
ZFP36L2	ATXN7L1	0.95	1
ZFP36L2	CCNL2	0.95	1
ZFP36L2	ANKRD20A4	0.95	1
ZFP36L2	MR1	0.95	1
ZFP36L2	TFE3	0.95	1
ATXN2	Amp_3q26.32	0.95	1
ATXN7L1	ANKRD20A4	0.95	1
CCNL2	OR4D10	0.95	1
CCNL2	ANKRD20A4	0.95	1
CCNL2	TFE3	0.95	1
DST	Del_9q34.2	0.95	1
FHOD3	Del_9q21.11	0.95	1
ICOSLG	Amp_8q24.21	0.95	1
OR2T35	18p-Del	0.95	1
OR4D10	ANKRD20A4	0.95	1
SHISA4	Del_8p23.2	0.95	1
UBC	Amp_12p13.33	0.95	1
ZNF41	8p-Del	0.95	1
ANKRD20A4	MR1	0.95	1
ANKRD20A4	TFE3	0.95	1
CCDC82	Amp_8q24.21	0.95	1
CCDC82	Amp_15q26.3	0.95	1
CXCR3	Amp_15q26.3	0.95	1
KCNN3	Amp_10q22.3	0.95	1
MR1	TFE3	0.95	1
NBPF9	Del_8p23.2	0.95	1
OXCT2	18p-Del	0.95	1
PAX2	18p-Del	0.95	1
PCNXL2	Del_10q26.3	0.95	1
RBMX	Amp_3q26.32	0.95	1
RHOA	Amp_15q26.3	0.95	1
SDC1	Del_16q24.3	0.95	1
TCP11	Amp_8q24.21	0.95	1
ZBTB7C	18p-Del	0.95	1
17q-Amp	1p-Del	0.95	1
13q-Del	Amp_10q22.3	0.95	1
15q-Del	Amp_14q21.1	0.95	1
15q-Del	Del_12p13.1	0.95	1
9q-Del	Del_12p13.1	0.95	1
Amp_1p22.3	Amp_11p13	0.95	1
Amp_3q26.32	Amp_10q22.3	0.95	1
Amp_4q13.3	Del_5q11.2	0.95	1
Amp_10p15.1	Del_13q14.2	0.95	1
Amp_11q13.3	Del_22q13.32	0.95	1
Amp_17q23.1	Del_6p25.3	0.95	1
Del_12p13.1	Del_16q24.3	0.95	1
APC	SDC1	0.951	1
AQP12A	ASB10	0.951	1
AQP12A	FAM86B1	0.951	1
AQP12A	GRHL2	0.951	1
AQP12A	MORN1	0.951	1
AQP12A	C15orf39	0.951	1
AQP12A	PSIP1	0.951	1
AQP12A	SLC35B2	0.951	1
AQP12A	TPP2	0.951	1
AQP12A	USP36	0.951	1
AQP12A	Del_1p36.13	0.951	1
ASB10	HIST1H2BC	0.951	1
ASB10	KRAS	0.951	1
ASB10	ICOSLG	0.951	1
ASB10	MLC1	0.951	1
ASB10	OR6C76	0.951	1
ASB10	CABYR	0.951	1
ASB10	CCDC82	0.951	1
ASB10	CEP57	0.951	1
ASB10	CXCR3	0.951	1
ASB10	RHOA	0.951	1
ASB10	TARBP2	0.951	1
ASB10	TCP11	0.951	1
C1QTNF5	Amp_8p11.23	0.951	1
CASP8	FAM20C	0.951	1
CASP8	HLA-DRB5	0.951	1
CASP8	RAB42	0.951	1
CASP8	CCL13	0.951	1
CASP8	OR2T35	0.951	1
CASP8	XBP1	0.951	1
CASP8	OXCT2	0.951	1
CASP8	PAX2	0.951	1
CASP8	RHBG	0.951	1
CASP8	TTPAL	0.951	1
CASP8	ZBTB7C	0.951	1
CASP8	ZNF362	0.951	1
EPDR1	22q-Del	0.951	1
EPDR1	Del_12p13.1	0.951	1
FAM20C	MYB	0.951	1
FAM20C	FHOD3	0.951	1
FAM20C	UBC	0.951	1
FAM20C	FRMPD2	0.951	1
FAM20C	TGS1	0.951	1
FAM86B1	HIST1H2BC	0.951	1
FAM86B1	KRAS	0.951	1
FAM86B1	ICOSLG	0.951	1
FAM86B1	MLC1	0.951	1
FAM86B1	OR6C76	0.951	1
FAM86B1	CABYR	0.951	1
FAM86B1	CCDC82	0.951	1
FAM86B1	CEP57	0.951	1
FAM86B1	CXCR3	0.951	1
FAM86B1	RHOA	0.951	1
FAM86B1	TARBP2	0.951	1
FAM86B1	TCP11	0.951	1
GPS2	MAP2K4	0.951	1
HIST1H2BC	TCP10	0.951	1
HIST1H2BC	GRHL2	0.951	1
HIST1H2BC	GYG2	0.951	1
HIST1H2BC	MORN1	0.951	1
HIST1H2BC	C15orf39	0.951	1
HIST1H2BC	PSIP1	0.951	1
HIST1H2BC	TPP2	0.951	1
HLA-DRB5	MYB	0.951	1
HLA-DRB5	UBC	0.951	1
HLA-DRB5	TGS1	0.951	1
KRAS	TCP10	0.951	1
KRAS	GRHL2	0.951	1
KRAS	GYG2	0.951	1
KRAS	MORN1	0.951	1
KRAS	C15orf39	0.951	1
KRAS	PSIP1	0.951	1
KRAS	SLC35B2	0.951	1
KRAS	USP36	0.951	1
MAP2K4	THEM5	0.951	1
MAP2K4	GPRIN2	0.951	1
MAP2K4	ZNF687	0.951	1
MYB	RAB42	0.951	1
MYB	CCL13	0.951	1
MYB	OR2T35	0.951	1
MYB	XBP1	0.951	1
MYB	OXCT2	0.951	1
MYB	RHBG	0.951	1
MYB	RIBC1	0.951	1
MYB	TTPAL	0.951	1
MYB	ZBTB7C	0.951	1
MYB	ZNF362	0.951	1
NCOR1	PTEN	0.951	1
PIK3R1	Amp_19q13.42	0.951	1
PIK3R1	Del_17p12	0.951	1
PTHLH	1p-Del	0.951	1
PTHLH	Amp_8p11.23	0.951	1
PTPN22	TP53	0.951	1
RAB42	FHOD3	0.951	1
RAB42	UBC	0.951	1
RAB42	FRMPD2	0.951	1
RAB42	TGS1	0.951	1
RB1	Del_12p13.1	0.951	1
SF3B1	SPRR2B	0.951	1
SF3B1	SDC1	0.951	1
SMAD2	1p-Del	0.951	1
TCP10	ICOSLG	0.951	1
TCP10	MLC1	0.951	1
TCP10	OR6C76	0.951	1
TCP10	CABYR	0.951	1
TCP10	CCDC82	0.951	1
TCP10	CEP57	0.951	1
TCP10	CXCR3	0.951	1
TCP10	RHOA	0.951	1
TCP10	TARBP2	0.951	1
TCP10	TCP11	0.951	1
TP53	PRICKLE3	0.951	1
TP53	Del_12p13.1	0.951	1
VCPIP1	18p-Del	0.951	1
ABCA8	Amp_6q21	0.951	1
ABCA8	Amp_11p13	0.951	1
CCL13	FHOD3	0.951	1
CCL13	UBC	0.951	1
CCL13	TGS1	0.951	1
DNAH12	SDC1	0.951	1
FBXO17	Del_12p13.1	0.951	1
FHOD3	OR2T35	0.951	1
FHOD3	XBP1	0.951	1
FHOD3	OXCT2	0.951	1
FHOD3	PAX2	0.951	1
FHOD3	RHBG	0.951	1
FHOD3	TTPAL	0.951	1
FHOD3	ZBTB7C	0.951	1
FHOD3	ZNF362	0.951	1
FXYD5	Del_12p13.1	0.951	1
GRHL2	ICOSLG	0.951	1
GRHL2	MLC1	0.951	1
GRHL2	OR6C76	0.951	1
GRHL2	CABYR	0.951	1
GRHL2	CCDC82	0.951	1
GRHL2	CEP57	0.951	1
GRHL2	CXCR3	0.951	1
GRHL2	TCP11	0.951	1
GYG2	ICOSLG	0.951	1
GYG2	MLC1	0.951	1
GYG2	OR6C76	0.951	1
GYG2	CABYR	0.951	1
GYG2	CCDC82	0.951	1
GYG2	CEP57	0.951	1
GYG2	CXCR3	0.951	1
GYG2	RHOA	0.951	1
GYG2	TARBP2	0.951	1
GYG2	TCP11	0.951	1
HRNR	Amp_3p25.1	0.951	1
ICOSLG	MORN1	0.951	1
ICOSLG	C15orf39	0.951	1
ICOSLG	PSIP1	0.951	1
ICOSLG	SLC35B2	0.951	1
ICOSLG	TPP2	0.951	1
ICOSLG	USP36	0.951	1
ICOSLG	Del_1p36.13	0.951	1
MLC1	MORN1	0.951	1
MLC1	C15orf39	0.951	1
MLC1	PSIP1	0.951	1
MLC1	SLC35B2	0.951	1
MLC1	TPP2	0.951	1
MLC1	USP36	0.951	1
MORN1	CABYR	0.951	1
MORN1	CEP57	0.951	1
MORN1	CXCR3	0.951	1
MORN1	TARBP2	0.951	1
MYH9	SPRR2B	0.951	1
MYH9	SDC1	0.951	1
OR2T35	UBC	0.951	1
OR2T35	FRMPD2	0.951	1
OR2T35	TGS1	0.951	1
OR2T35	8p-Amp	0.951	1
OR2T35	18q-Del	0.951	1
OR6C76	C15orf39	0.951	1
OR6C76	PSIP1	0.951	1
OR6C76	SLC35B2	0.951	1
OR6C76	TPP2	0.951	1
SHISA4	Del_12p13.1	0.951	1
SPRR2B	KDM6A	0.951	1
UBC	OXCT2	0.951	1
UBC	PAX2	0.951	1
UBC	RIBC1	0.951	1
UBC	TTPAL	0.951	1
UBC	ZBTB7C	0.951	1
UBC	ZNF362	0.951	1
UBC	17q-Del	0.951	1
WDR52	SDC1	0.951	1
XBP1	FRMPD2	0.951	1
XBP1	8p-Amp	0.951	1
ANKRD20A4	Amp_14q21.1	0.951	1
BCORL1	Amp_11p13	0.951	1
BCORL1	Del_17p12	0.951	1
C15orf39	CABYR	0.951	1
C15orf39	CCDC82	0.951	1
C15orf39	CEP57	0.951	1
C15orf39	CXCR3	0.951	1
C15orf39	RHOA	0.951	1
C15orf39	TARBP2	0.951	1
C15orf39	TCP11	0.951	1
CABYR	PSIP1	0.951	1
CABYR	SLC35B2	0.951	1
CABYR	TPP2	0.951	1
CABYR	USP36	0.951	1
CCDC82	PSIP1	0.951	1
CCDC82	SLC35B2	0.951	1
CCDC82	TPP2	0.951	1
CCDC82	USP36	0.951	1
CDC42EP1	22q-Del	0.951	1
CEP57	SLC35B2	0.951	1
CEP57	TPP2	0.951	1
CEP57	USP36	0.951	1
CEP57	Del_1p36.13	0.951	1
CXCR3	TPP2	0.951	1
FRMPD2	PAX2	0.951	1
FRMPD2	RHBG	0.951	1
FRMPD2	TTPAL	0.951	1
FRMPD2	ZBTB7C	0.951	1
FRMPD2	ZNF362	0.951	1
KCNN3	18p-Del	0.951	1
KDM6A	SDC1	0.951	1
NBPF9	Del_12p13.1	0.951	1
OXCT2	TGS1	0.951	1
OXCT2	18q-Del	0.951	1
PAX2	TGS1	0.951	1
PAX2	8p-Amp	0.951	1
PAX2	18q-Del	0.951	1
PSIP1	RHOA	0.951	1
PSIP1	TARBP2	0.951	1
PSIP1	TCP11	0.951	1
RHOA	SLC35B2	0.951	1
RHOA	TPP2	0.951	1
RHOA	USP36	0.951	1
RIBC1	TGS1	0.951	1
SLC35B2	TCP11	0.951	1
TARBP2	TPP2	0.951	1
TARBP2	USP36	0.951	1
TCP11	TPP2	0.951	1
TCP11	USP36	0.951	1
TGS1	TTPAL	0.951	1
TGS1	ZBTB7C	0.951	1
TGS1	ZNF362	0.951	1
ZBTB7C	18q-Del	0.951	1
20p-Amp	Del_10q23.31	0.951	1
7p-Amp	Amp_3p25.1	0.951	1
8p-Amp	1p-Del	0.951	1
11p-Del	Amp_12p13.33	0.951	1
16p-Del	Amp_6q21	0.951	1
Amp_11p13	Del_12p13.1	0.951	1
Amp_11q13.3	Amp_12p13.33	0.951	1
Amp_19p13.12	Del_2q37.3	0.951	1
Amp_20q13.2	Del_4p16.3	0.951	1
Del_7q36.1	Del_18q23	0.951	1
AARS	NCOR1	0.952	1
AARS	17q-Amp	0.952	1
ARID1A	HRNR	0.952	1
ASB10	Del_7p22.3	0.952	1
CBFB	ABCA8	0.952	1
CDH1	NCOR1	0.952	1
CDKN1B	PTEN	0.952	1
FAM20C	6q-Del	0.952	1
FAM86B1	Del_7p22.3	0.952	1
FBXW7	FOXA1	0.952	1
GPS2	Del_6p25.3	0.952	1
NCOR1	VCPIP1	0.952	1
PTEN	ANGPT4	0.952	1
PTEN	ATHL1	0.952	1
PTPN22	Del_3p21.31	0.952	1
PTPN22	Del_9p21.3	0.952	1
TBX3	SPEN	0.952	1
TCP10	20q-Amp	0.952	1
TCP10	Amp_3p25.1	0.952	1
TCP10	Del_7p22.3	0.952	1
VCPIP1	18q-Del	0.952	1
ZFP36L1	8p-Amp	0.952	1
ZFP36L1	Amp_4q13.3	0.952	1
DLX6	Amp_17q23.1	0.952	1
GRHL2	Amp_3p25.1	0.952	1
GRHL2	Amp_11q14.1	0.952	1
GYG2	Del_7p22.3	0.952	1
ICOSLG	Amp_1q44	0.952	1
MLC1	Amp_1q44	0.952	1
MORN1	Amp_11q14.1	0.952	1
NFE2L3	8p-Amp	0.952	1
OR2T35	6q-Del	0.952	1
C15orf39	Amp_3p25.1	0.952	1
CEP57	Amp_1q44	0.952	1
CXCR3	Amp_1q44	0.952	1
EIF4A2	17q-Amp	0.952	1
EIF4A2	18q-Del	0.952	1
EIF4A2	Amp_4q13.3	0.952	1
FGFR2	Del_6p25.3	0.952	1
KCNN3	17q-Amp	0.952	1
KDM6A	1p-Del	0.952	1
PSIP1	Amp_3p25.1	0.952	1
SLC35B2	Amp_3p25.1	0.952	1
SLC35B2	Amp_11q14.1	0.952	1
TPP2	Del_7p22.3	0.952	1
USP36	Amp_11q14.1	0.952	1
ZNF362	6q-Del	0.952	1
14q-Del	Amp_3q26.32	0.952	1
Amp_3q26.32	Del_21q11.2	0.952	1
Amp_4q13.3	Del_9p23	0.952	1
Amp_15q26.3	Del_13q14.2	0.952	1
C1QTNF5	Del_12q23.1	0.953	1
C1QTNF5	Del_12q24.31	0.953	1
NCOR1	Del_17p12	0.953	1
PTHLH	Del_12q23.1	0.953	1
PTHLH	Del_12q24.31	0.953	1
RB1	AKD1	0.953	1
SMAD2	Del_9p23	0.953	1
SMAD4	Del_12q24.31	0.953	1
ATXN7L1	Del_12q23.1	0.953	1
FHOD3	Amp_12q15	0.953	1
SPRR2B	Del_18q23	0.953	1
ATHL1	Del_17p12	0.953	1
MED23	Del_22q13.32	0.953	1
TFE3	Del_12q23.1	0.953	1
TFE3	Del_12q24.31	0.953	1
TGS1	Amp_12q15	0.953	1
11q-Del	Amp_11p13	0.953	1
15q-Del	Amp_10q22.3	0.953	1
16q-Del	Amp_8p11.23	0.953	1
17q-Del	Del_7q36.1	0.953	1
1q-Del	Del_17p12	0.953	1
4p-Del	Amp_11q14.1	0.953	1
9q-Del	Amp_10q22.3	0.953	1
Amp_8q24.21	Del_10q23.31	0.953	1
Amp_10q22.3	Del_20p13	0.953	1
Amp_15q26.3	Amp_17q23.1	0.953	1
Del_7q36.1	Del_21q11.2	0.953	1
AARS	EPDR1	0.954	1
AARS	DLX6	0.954	1
AARS	FXYD5	0.954	1
AARS	AKT2	0.954	1
AARS	CDC42EP1	0.954	1
AARS	NBPF9	0.954	1
ASB10	Del_4p16.3	0.954	1
EPDR1	VCPIP1	0.954	1
EPDR1	ZFP36L1	0.954	1
EPDR1	HLA-C	0.954	1
EPDR1	NFE2L3	0.954	1
EPDR1	EIF4A2	0.954	1
EPDR1	KCNN3	0.954	1
ERBB2	PIWIL1	0.954	1
ERBB2	RPGR	0.954	1
ERBB2	ANKRD12	0.954	1
FAM86B1	22q-Del	0.954	1
FBXW7	SDC1	0.954	1
GPS2	HRNR	0.954	1
PIK3R1	SDC1	0.954	1
TBL1XR1	DST	0.954	1
THEM5	HRNR	0.954	1
VCPIP1	DLX6	0.954	1
VCPIP1	FBXO17	0.954	1
VCPIP1	SHISA4	0.954	1
VCPIP1	CDC42EP1	0.954	1
VCPIP1	NBPF9	0.954	1
WSCD2	NF1	0.954	1
ZFP36L1	DLX6	0.954	1
ZFP36L1	FBXO17	0.954	1
ZFP36L1	FXYD5	0.954	1
ZFP36L1	SHISA4	0.954	1
ZFP36L1	AKT2	0.954	1
ZFP36L1	CDC42EP1	0.954	1
ZFP36L1	MKL1	0.954	1
ABCA8	SPRR2B	0.954	1
ABCA8	SDC1	0.954	1
DLX6	HLA-C	0.954	1
DLX6	NFE2L3	0.954	1
DLX6	EIF4A2	0.954	1
DST	ANGPT4	0.954	1
DST	ATHL1	0.954	1
DST	1q-Amp	0.954	1
ERBB3	DOCK11	0.954	1
FBXO17	HLA-C	0.954	1
FBXO17	KCNN3	0.954	1
FXYD5	HLA-C	0.954	1
FXYD5	NFE2L3	0.954	1
FXYD5	EIF4A2	0.954	1
FXYD5	KCNN3	0.954	1
FXYD5	4q-Del	0.954	1
GPRIN2	HRNR	0.954	1
HLA-C	SHISA4	0.954	1
HLA-C	AKT2	0.954	1
HLA-C	CDC42EP1	0.954	1
HLA-C	MKL1	0.954	1
HLA-C	NBPF9	0.954	1
HLA-C	6q-Del	0.954	1
HRNR	FGFR2	0.954	1
HRNR	ZNF687	0.954	1
ICOSLG	Del_3p21.31	0.954	1
MLC1	Del_3p21.31	0.954	1
MYH9	Del_17q21.31	0.954	1
NFE2L3	SHISA4	0.954	1
NFE2L3	AKT2	0.954	1
NFE2L3	CDC42EP1	0.954	1
NFE2L3	MKL1	0.954	1
NFE2L3	NBPF9	0.954	1
SHISA4	EIF4A2	0.954	1
SHISA4	KCNN3	0.954	1
SHISA4	4q-Del	0.954	1
SPRR2B	BCORL1	0.954	1
SPRR2B	Del_17q21.31	0.954	1
AKT2	EIF4A2	0.954	1
AKT2	KCNN3	0.954	1
BCORL1	SDC1	0.954	1
C15orf39	Del_4p16.3	0.954	1
CDC42EP1	EIF4A2	0.954	1
CDC42EP1	KCNN3	0.954	1
DOCK11	Amp_10q22.3	0.954	1
EIF4A2	NBPF9	0.954	1
KCNN3	MKL1	0.954	1
KCNN3	NBPF9	0.954	1
KCNN3	6q-Del	0.954	1
SDC1	Del_17q21.31	0.954	1
SLC35B2	Del_4p16.3	0.954	1
TTPAL	8q-Amp	0.954	1
USP36	22q-Del	0.954	1
USP36	Del_5q11.2	0.954	1
7q-Amp	Del_16q24.3	0.954	1
8q-Amp	Del_5q21.3	0.954	1
15q-Del	Amp_20q13.2	0.954	1
9q-Del	Amp_15q26.3	0.954	1
Amp_1q21.3	Amp_13q34	0.954	1
Amp_3q26.32	Amp_15q26.3	0.954	1
Amp_8p11.23	Del_9q21.11	0.954	1
Amp_8p11.21	Del_7p22.3	0.954	1
Amp_11q13.3	Del_19q13.32	0.954	1
Amp_12q15	Del_17q21.31	0.954	1
Del_6q15	Del_10q26.3	0.954	1
ACTL6B	11q-Del	0.955	1
CDH1	GRHL2	0.955	1
CDH1	PSIP1	0.955	1
FAM20C	GPS2	0.955	1
FAM20C	HIST1H3B	0.955	1
FAM20C	THEM5	0.955	1
FAM20C	GPRIN2	0.955	1
FAM20C	PPEF1	0.955	1
FAM20C	ZNF41	0.955	1
FAM20C	FGFR2	0.955	1
FAM20C	IRS4	0.955	1
FAM20C	ZNF687	0.955	1
FAM86B1	Del_1p22.1	0.955	1
GATA3	DST	0.955	1
GPS2	RAB42	0.955	1
GPS2	CCL13	0.955	1
GPS2	OR2T35	0.955	1
GPS2	XBP1	0.955	1
GPS2	PAX2	0.955	1
GPS2	RHBG	0.955	1
GPS2	RIBC1	0.955	1
GPS2	TTPAL	0.955	1
GPS2	ZBTB7C	0.955	1
GPS2	ZNF362	0.955	1
HIST1H3B	HLA-DRB5	0.955	1
HIST1H3B	RAB42	0.955	1
HIST1H3B	OR2T35	0.955	1
HIST1H3B	XBP1	0.955	1
HIST1H3B	PAX2	0.955	1
HIST1H3B	RHBG	0.955	1
HIST1H3B	RIBC1	0.955	1
HIST1H3B	TTPAL	0.955	1
HIST1H3B	ZNF362	0.955	1
HLA-DRB5	THEM5	0.955	1
HLA-DRB5	PPEF1	0.955	1
HLA-DRB5	ZNF41	0.955	1
HLA-DRB5	FGFR2	0.955	1
HLA-DRB5	ZNF687	0.955	1
MAP3K1	FBXO17	0.955	1
MLL3	MYB	0.955	1
PIWIL1	Del_19p13.3	0.955	1
RAB42	THEM5	0.955	1
RAB42	GPRIN2	0.955	1
RAB42	PPEF1	0.955	1
RAB42	ZNF41	0.955	1
RAB42	FGFR2	0.955	1
RAB42	IRS4	0.955	1
RAB42	ZNF687	0.955	1
RUNX1	FHOD3	0.955	1
RUNX1	TGS1	0.955	1
SF3B1	PCNXL2	0.955	1
TAF1L	Del_19p13.3	0.955	1
THEM5	CCL13	0.955	1
THEM5	OR2T35	0.955	1
THEM5	XBP1	0.955	1
THEM5	OXCT2	0.955	1
THEM5	PAX2	0.955	1
THEM5	RHBG	0.955	1
THEM5	RIBC1	0.955	1
THEM5	TTPAL	0.955	1
THEM5	ZBTB7C	0.955	1
THEM5	ZNF362	0.955	1
VCPIP1	13q-Del	0.955	1
CCL13	GPRIN2	0.955	1
CCL13	ZNF41	0.955	1
CCL13	FGFR2	0.955	1
CCL13	IRS4	0.955	1
CCL13	ZNF687	0.955	1
DLX6	Del_9q21.11	0.955	1
DST	5q-Del	0.955	1
DST	Del_10q26.3	0.955	1
ERBB3	Del_19p13.3	0.955	1
FXYD5	Amp_12p13.33	0.955	1
GPRIN2	OR2T35	0.955	1
GPRIN2	XBP1	0.955	1
GPRIN2	PAX2	0.955	1
GPRIN2	RHBG	0.955	1
GPRIN2	RIBC1	0.955	1
GPRIN2	TTPAL	0.955	1
GPRIN2	ZBTB7C	0.955	1
GPRIN2	ZNF362	0.955	1
GYG2	Amp_17q23.1	0.955	1
MORN1	Amp_17q23.1	0.955	1
MYH9	PCNXL2	0.955	1
OR2T35	PPEF1	0.955	1
OR2T35	ZNF41	0.955	1
OR2T35	FGFR2	0.955	1
OR2T35	IRS4	0.955	1
OR2T35	ZNF687	0.955	1
PPEF1	OXCT2	0.955	1
PPEF1	PAX2	0.955	1
PPEF1	RIBC1	0.955	1
PPEF1	TTPAL	0.955	1
PPEF1	ZNF362	0.955	1
PPEF1	Del_8p23.2	0.955	1
WDR52	Amp_6p23	0.955	1
XBP1	ZNF41	0.955	1
XBP1	FGFR2	0.955	1
XBP1	IRS4	0.955	1
XBP1	ZNF687	0.955	1
ZNF41	OXCT2	0.955	1
ZNF41	RHBG	0.955	1
ZNF41	ZBTB7C	0.955	1
ZNF41	ZNF362	0.955	1
CASZ1	Amp_11q14.1	0.955	1
CDC42EP1	Del_9q21.11	0.955	1
FGFR2	OXCT2	0.955	1
FGFR2	PAX2	0.955	1
FGFR2	RHBG	0.955	1
FGFR2	TTPAL	0.955	1
FGFR2	ZBTB7C	0.955	1
FGFR2	ZNF362	0.955	1
IRS4	PAX2	0.955	1
IRS4	ZBTB7C	0.955	1
IRS4	ZNF362	0.955	1
NBPF9	Amp_12p13.33	0.955	1
OXCT2	ZNF687	0.955	1
PAX2	ZNF687	0.955	1
PSIP1	Amp_17q23.1	0.955	1
RBMX	5q-Del	0.955	1
RIBC1	ZNF687	0.955	1
SLC35B2	Amp_17q23.1	0.955	1
SLC35B2	Del_1p22.1	0.955	1
TNRC6B	Del_19p13.3	0.955	1
TTPAL	ZNF687	0.955	1
USP36	Amp_17q23.1	0.955	1
ZBTB7C	ZNF687	0.955	1
20p-Amp	Del_10q26.3	0.955	1
20q-Amp	Del_17p12	0.955	1
7q-Amp	16q-Del	0.955	1
11p-Del	Del_21q11.2	0.955	1
11q-Del	1q-Del	0.955	1
22q-Del	Amp_8p11.21	0.955	1
22q-Del	Del_5q21.3	0.955	1
Amp_4q13.3	Amp_17q23.1	0.955	1
Amp_8p11.23	Del_10q23.31	0.955	1
Amp_11q13.3	Amp_19p13.12	0.955	1
Amp_19q12	Del_9q34.2	0.955	1
Del_5q11.2	Del_11q23.3	0.955	1
Del_7q36.1	Del_22q13.32	0.955	1
AQP12A	11q-Del	0.956	1
CBFB	DST	0.956	1
CTCF	Del_2q37.3	0.956	1
ERBB2	Amp_4q13.3	0.956	1
FAM86B1	Amp_19p13.12	0.956	1
FBXW7	1q-Amp	0.956	1
FOXA1	DST	0.956	1
ABCA8	1q-Amp	0.956	1
ATXN2	Amp_20q13.2	0.956	1
DLX6	14q-Del	0.956	1
DLX6	17q-Del	0.956	1
DLX6	Amp_19q12	0.956	1
FXYD5	17q-Del	0.956	1
FXYD5	Del_21q11.2	0.956	1
ICOSLG	5q-Del	0.956	1
MLC1	11q-Del	0.956	1
MLC1	5q-Del	0.956	1
MLC1	Amp_1q21.3	0.956	1
PPEF1	Del_12p13.1	0.956	1
SHISA4	17q-Del	0.956	1
SHISA4	Del_21q11.2	0.956	1
XBP1	20p-Amp	0.956	1
ZNF41	Del_18q23	0.956	1
CCDC82	5q-Del	0.956	1
CDC42EP1	17q-Del	0.956	1
CEP57	5q-Del	0.956	1
CXCR3	Amp_1q21.3	0.956	1
MKL1	17q-Del	0.956	1
MUC6	Del_3p21.31	0.956	1
NBPF9	14q-Del	0.956	1
NBPF9	17q-Del	0.956	1
OXCT2	20p-Amp	0.956	1
PSIP1	Amp_19p13.12	0.956	1
RBMX	Del_10q23.31	0.956	1
RHBG	20p-Amp	0.956	1
RHOA	Amp_1q21.3	0.956	1
SLC35B2	Amp_19p13.12	0.956	1
TPP2	Amp_19p13.12	0.956	1
USP36	Amp_19p13.12	0.956	1
ZBTB7C	20p-Amp	0.956	1
ZMYM3	Del_3p21.31	0.956	1
ZNF362	20p-Amp	0.956	1
20q-Amp	15q-Del	0.956	1
20q-Amp	Del_7p22.3	0.956	1
15q-Del	Amp_17q23.1	0.956	1
1p-Del	Del_6q27	0.956	1
Amp_10q22.3	Del_19p13.3	0.956	1
Amp_13q34	Amp_15q26.3	0.956	1
Amp_15q26.3	Amp_19p13.12	0.956	1
Del_2q37.3	Del_7q36.1	0.956	1
AQP12A	PTHLH	0.957	1
AQP12A	SMAD2	0.957	1
AQP12A	SMAD4	0.957	1
AQP12A	ZFP36L2	0.957	1
AQP12A	ATXN7L1	0.957	1
AQP12A	CCNL2	0.957	1
AQP12A	OR4D10	0.957	1
AQP12A	ANKRD20A4	0.957	1
AQP12A	MR1	0.957	1
AQP12A	TFE3	0.957	1
C1QTNF5	HIST1H2BC	0.957	1
C1QTNF5	KRAS	0.957	1
C1QTNF5	ICOSLG	0.957	1
C1QTNF5	MLC1	0.957	1
C1QTNF5	OR6C76	0.957	1
C1QTNF5	CABYR	0.957	1
C1QTNF5	CCDC82	0.957	1
C1QTNF5	CEP57	0.957	1
C1QTNF5	CXCR3	0.957	1
C1QTNF5	RHOA	0.957	1
C1QTNF5	TARBP2	0.957	1
C1QTNF5	TCP11	0.957	1
EPDR1	Del_7q36.1	0.957	1
FAM20C	Del_5q21.3	0.957	1
FBXW7	Amp_1q44	0.957	1
GATA3	ZMYM3	0.957	1
GPS2	SPEN	0.957	1
GPS2	7q-Amp	0.957	1
HIST1H2BC	PTHLH	0.957	1
HIST1H2BC	SMAD4	0.957	1
HIST1H2BC	ZFP36L2	0.957	1
HIST1H2BC	ATXN7L1	0.957	1
HIST1H2BC	CCNL2	0.957	1
HIST1H2BC	OR4D10	0.957	1
HIST1H2BC	ANKRD20A4	0.957	1
HIST1H2BC	MR1	0.957	1
HIST1H2BC	TFE3	0.957	1
KRAS	PTHLH	0.957	1
KRAS	SMAD4	0.957	1
KRAS	ZFP36L2	0.957	1
KRAS	ATXN7L1	0.957	1
KRAS	CCNL2	0.957	1
KRAS	ANKRD20A4	0.957	1
KRAS	TFE3	0.957	1
PIK3CA	KDM6A	0.957	1
PTHLH	ICOSLG	0.957	1
PTHLH	MLC1	0.957	1
PTHLH	OR6C76	0.957	1
PTHLH	CABYR	0.957	1
PTHLH	CCDC82	0.957	1
PTHLH	CEP57	0.957	1
PTHLH	CXCR3	0.957	1
PTHLH	RHOA	0.957	1
PTHLH	TARBP2	0.957	1
PTHLH	TCP11	0.957	1
SMAD2	ICOSLG	0.957	1
SMAD2	MLC1	0.957	1
SMAD2	OR6C76	0.957	1
SMAD2	CABYR	0.957	1
SMAD2	CCDC82	0.957	1
SMAD2	CEP57	0.957	1
SMAD2	CXCR3	0.957	1
SMAD2	TCP11	0.957	1
SMAD2	Del_19p13.3	0.957	1
SMAD4	ICOSLG	0.957	1
SMAD4	MLC1	0.957	1
SMAD4	OR6C76	0.957	1
SMAD4	CABYR	0.957	1
SMAD4	CEP57	0.957	1
SMAD4	CXCR3	0.957	1
SMAD4	TARBP2	0.957	1
ZFP36L1	Del_6q15	0.957	1
ZFP36L2	ICOSLG	0.957	1
ZFP36L2	MLC1	0.957	1
ZFP36L2	OR6C76	0.957	1
ZFP36L2	CABYR	0.957	1
ZFP36L2	CCDC82	0.957	1
ZFP36L2	CEP57	0.957	1
ZFP36L2	CXCR3	0.957	1
ZFP36L2	RHOA	0.957	1
ZFP36L2	TARBP2	0.957	1
ZFP36L2	TCP11	0.957	1
ABCA8	Amp_1q44	0.957	1
ANKRD12	Del_19q13.32	0.957	1
ATXN2	SPRR2B	0.957	1
ATXN2	SDC1	0.957	1
ATXN7L1	ICOSLG	0.957	1
ATXN7L1	MLC1	0.957	1
ATXN7L1	OR6C76	0.957	1
ATXN7L1	CABYR	0.957	1
ATXN7L1	CCDC82	0.957	1
ATXN7L1	CEP57	0.957	1
ATXN7L1	CXCR3	0.957	1
ATXN7L1	RHOA	0.957	1
ATXN7L1	TARBP2	0.957	1
ATXN7L1	TCP11	0.957	1
CCNL2	MLC1	0.957	1
CCNL2	OR6C76	0.957	1
CCNL2	CABYR	0.957	1
CCNL2	CEP57	0.957	1
CCNL2	CXCR3	0.957	1
CCNL2	TARBP2	0.957	1
ERBB3	Del_19q13.32	0.957	1
FBXO17	Amp_12q15	0.957	1
ICOSLG	OR4D10	0.957	1
ICOSLG	ANKRD20A4	0.957	1
ICOSLG	MR1	0.957	1
ICOSLG	TFE3	0.957	1
MLC1	OR4D10	0.957	1
MLC1	ANKRD20A4	0.957	1
MLC1	MR1	0.957	1
MLC1	TFE3	0.957	1
OR4D10	OR6C76	0.957	1
OR4D10	CABYR	0.957	1
OR4D10	CCDC82	0.957	1
OR4D10	CEP57	0.957	1
OR4D10	CXCR3	0.957	1
OR4D10	RHOA	0.957	1
OR4D10	TARBP2	0.957	1
OR4D10	TCP11	0.957	1
OR6C76	ANKRD20A4	0.957	1
OR6C76	TFE3	0.957	1
PPEF1	SPEN	0.957	1
SHISA4	Amp_12q15	0.957	1
SPRR2B	MED23	0.957	1
SPRR2B	MUC6	0.957	1
ZNF41	SPEN	0.957	1
AKT2	Del_7q36.1	0.957	1
ANKRD20A4	CABYR	0.957	1
ANKRD20A4	CCDC82	0.957	1
ANKRD20A4	CEP57	0.957	1
ANKRD20A4	CXCR3	0.957	1
ANKRD20A4	RHOA	0.957	1
ANKRD20A4	TCP11	0.957	1
CABYR	MR1	0.957	1
CABYR	TFE3	0.957	1
CCDC82	MR1	0.957	1
CCDC82	TFE3	0.957	1
CDC42EP1	Amp_12q15	0.957	1
CEP57	MR1	0.957	1
CXCR3	MR1	0.957	1
CXCR3	TFE3	0.957	1
FGFR2	SPEN	0.957	1
FGFR2	7q-Amp	0.957	1
IRS4	7q-Amp	0.957	1
KCNN3	Del_6q15	0.957	1
MLL4	Del_4p16.3	0.957	1
MR1	TCP11	0.957	1
MUC6	SDC1	0.957	1
MUC6	9p-Del	0.957	1
MUC6	Del_10q26.3	0.957	1
NBPF9	Amp_12q15	0.957	1
OXCT2	Del_5q21.3	0.957	1
PSIP1	Del_11q23.3	0.957	1
RBMX	SDC1	0.957	1
RBMX	Del_10q26.3	0.957	1
RHOA	TFE3	0.957	1
SDC1	ZMYM3	0.957	1
SPEN	ZNF687	0.957	1
TARBP2	TFE3	0.957	1
TCP11	TFE3	0.957	1
USP36	Amp_3q26.32	0.957	1
USP36	Del_11q23.3	0.957	1
ZNF362	Del_5q21.3	0.957	1
8q-Amp	Amp_3p25.1	0.957	1
8q-Amp	Del_7p22.3	0.957	1
15q-Del	18p-Del	0.957	1
17p-Del	Amp_20q13.2	0.957	1
1p-Del	Del_12q23.1	0.957	1
8p-Del	Amp_19q12	0.957	1
Amp_3q26.32	Amp_17q12	0.957	1
Amp_12p13.33	Del_9p21.3	0.957	1
Del_16q24.3	Del_20p13	0.957	1
AQP12A	Amp_11p13	0.958	1
CBFB	ATXN2	0.958	1
CBFB	MUC6	0.958	1
CBFB	RBMX	0.958	1
CDKN1B	1q-Amp	0.958	1
FOXA1	ATXN2	0.958	1
FOXA1	MUC6	0.958	1
FOXA1	RBMX	0.958	1
FOXA1	ZMYM3	0.958	1
FOXA1	Del_16q24.3	0.958	1
MLL3	FBXO17	0.958	1
MLL3	FXYD5	0.958	1
MLL3	SHISA4	0.958	1
MLL3	AKT2	0.958	1
PIK3CA	FBXO17	0.958	1
PTPN22	1q-Amp	0.958	1
RB1	ANKRD12	0.958	1
TAF1L	TP53	0.958	1
TBX3	FHOD3	0.958	1
TBX3	FRMPD2	0.958	1
TBX3	TGS1	0.958	1
TP53	5p-Amp	0.958	1
TP53	Amp_11p13	0.958	1
ZFP36L1	8q-Amp	0.958	1
ERBB3	11p-Del	0.958	1
FHOD3	9q-Del	0.958	1
ICOSLG	Amp_11p13	0.958	1
PRICKLE3	1q-Amp	0.958	1
ANGPT4	Del_2q37.3	0.958	1
CCDC82	Amp_11p13	0.958	1
CXCR3	Amp_19q13.42	0.958	1
OXCT2	17p-Del	0.958	1
RHBG	17p-Del	0.958	1
TARBP2	5p-Amp	0.958	1
TARBP2	Amp_6q21	0.958	1
TCP11	5p-Amp	0.958	1
ZNF362	17p-Del	0.958	1
17q-Amp	9q-Del	0.958	1
20q-Amp	Del_2q37.3	0.958	1
15q-Del	Amp_4q13.3	0.958	1
Amp_1q21.3	Del_7q36.1	0.958	1
Amp_6q21	Del_10q23.31	0.958	1
Amp_19q13.42	Del_10q23.31	0.958	1
ACTL6B	FAM20C	0.959	1
ACTL6B	HLA-DRB5	0.959	1
ACTL6B	RAB42	0.959	1
ACTL6B	CCL13	0.959	1
ACTL6B	OR2T35	0.959	1
ACTL6B	XBP1	0.959	1
ACTL6B	OXCT2	0.959	1
ACTL6B	RHBG	0.959	1
ACTL6B	RIBC1	0.959	1
ACTL6B	TTPAL	0.959	1
ACTL6B	ZBTB7C	0.959	1
ACTL6B	11p-Del	0.959	1
APC	DOCK11	0.959	1
ASB10	EPDR1	0.959	1
ASB10	FBXO17	0.959	1
ASB10	FXYD5	0.959	1
ASB10	SHISA4	0.959	1
ASB10	AKT2	0.959	1
ASB10	CDC42EP1	0.959	1
ASB10	MKL1	0.959	1
ASB10	NBPF9	0.959	1
C1QTNF5	Del_11p15.5	0.959	1
CDH1	CASZ1	0.959	1
CDKN1B	FAM20C	0.959	1
CDKN1B	HLA-DRB5	0.959	1
CDKN1B	MAP2K4	0.959	1
CDKN1B	RAB42	0.959	1
CDKN1B	CCL13	0.959	1
CDKN1B	OR2T35	0.959	1
CDKN1B	XBP1	0.959	1
CDKN1B	OXCT2	0.959	1
CDKN1B	PAX2	0.959	1
CDKN1B	RHBG	0.959	1
CDKN1B	RIBC1	0.959	1
CDKN1B	TTPAL	0.959	1
CDKN1B	ZBTB7C	0.959	1
CDKN1B	ZNF362	0.959	1
EPDR1	FAM86B1	0.959	1
EPDR1	TCP10	0.959	1
EPDR1	GRHL2	0.959	1
EPDR1	GYG2	0.959	1
EPDR1	MORN1	0.959	1
EPDR1	C15orf39	0.959	1
EPDR1	PSIP1	0.959	1
EPDR1	SLC35B2	0.959	1
EPDR1	TPP2	0.959	1
EPDR1	USP36	0.959	1
ERBB2	KDM6A	0.959	1
FAM20C	PTPN22	0.959	1
FAM20C	TBL1XR1	0.959	1
FAM20C	PRICKLE3	0.959	1
FAM20C	ANGPT4	0.959	1
FAM20C	ATHL1	0.959	1
FAM20C	1q-Del	0.959	1
FAM86B1	DLX6	0.959	1
FAM86B1	FBXO17	0.959	1
FAM86B1	FXYD5	0.959	1
FAM86B1	AKT2	0.959	1
FAM86B1	CDC42EP1	0.959	1
FAM86B1	MKL1	0.959	1
FAM86B1	NBPF9	0.959	1
FAM86B1	16q-Del	0.959	1
HLA-DRB5	PTPN22	0.959	1
HLA-DRB5	TBL1XR1	0.959	1
HLA-DRB5	PRICKLE3	0.959	1
HLA-DRB5	ATHL1	0.959	1
HLA-DRB5	1q-Del	0.959	1
MAP2K4	PTPN22	0.959	1
MAP2K4	1q-Del	0.959	1
PIK3CA	ZFP36L2	0.959	1
PTHLH	Del_14q24.1	0.959	1
PTPN22	RAB42	0.959	1
PTPN22	CCL13	0.959	1
PTPN22	OR2T35	0.959	1
PTPN22	OXCT2	0.959	1
PTPN22	PAX2	0.959	1
PTPN22	RIBC1	0.959	1
PTPN22	ZBTB7C	0.959	1
PTPN22	ZNF362	0.959	1
RAB42	TBL1XR1	0.959	1
RAB42	PRICKLE3	0.959	1
RAB42	ANGPT4	0.959	1
RAB42	ATHL1	0.959	1
RAB42	1q-Del	0.959	1
RB1	Amp_10q22.3	0.959	1
SMAD2	Amp_11q13.3	0.959	1
SMAD2	Del_11p15.5	0.959	1
TBL1XR1	CCL13	0.959	1
TBL1XR1	OR2T35	0.959	1
TBL1XR1	XBP1	0.959	1
TBL1XR1	PAX2	0.959	1
TBL1XR1	RHBG	0.959	1
TBL1XR1	RIBC1	0.959	1
TBL1XR1	TTPAL	0.959	1
TBL1XR1	ZBTB7C	0.959	1
TBL1XR1	ZNF362	0.959	1
TCP10	DLX6	0.959	1
TCP10	FBXO17	0.959	1
TCP10	FXYD5	0.959	1
TCP10	SHISA4	0.959	1
TCP10	AKT2	0.959	1
TCP10	CDC42EP1	0.959	1
TCP10	MKL1	0.959	1
TCP10	NBPF9	0.959	1
TCP10	16q-Del	0.959	1
ATXN2	Amp_19q13.42	0.959	1
CCL13	PRICKLE3	0.959	1
CCL13	ANGPT4	0.959	1
CCL13	ATHL1	0.959	1
CCL13	1q-Del	0.959	1
COL6A5	16q-Del	0.959	1
DLX6	GRHL2	0.959	1
DLX6	GYG2	0.959	1
DLX6	MORN1	0.959	1
DLX6	C15orf39	0.959	1
DLX6	PSIP1	0.959	1
DLX6	SLC35B2	0.959	1
DLX6	TPP2	0.959	1
DLX6	USP36	0.959	1
FBXO17	GRHL2	0.959	1
FBXO17	MORN1	0.959	1
FBXO17	C15orf39	0.959	1
FBXO17	SLC35B2	0.959	1
FBXO17	TPP2	0.959	1
FBXO17	USP36	0.959	1
FXYD5	GRHL2	0.959	1
FXYD5	GYG2	0.959	1
FXYD5	C15orf39	0.959	1
FXYD5	PSIP1	0.959	1
FXYD5	SLC35B2	0.959	1
FXYD5	TPP2	0.959	1
FXYD5	USP36	0.959	1
GRHL2	SHISA4	0.959	1
GRHL2	AKT2	0.959	1
GRHL2	CDC42EP1	0.959	1
GRHL2	MKL1	0.959	1
GRHL2	NBPF9	0.959	1
GYG2	SHISA4	0.959	1
GYG2	CDC42EP1	0.959	1
GYG2	MKL1	0.959	1
GYG2	NBPF9	0.959	1
GYG2	16q-Del	0.959	1
GYG2	Amp_1p22.3	0.959	1
MORN1	SHISA4	0.959	1
MORN1	AKT2	0.959	1
MORN1	CDC42EP1	0.959	1
MORN1	NBPF9	0.959	1
OR2T35	PRICKLE3	0.959	1
OR2T35	ANGPT4	0.959	1
OR2T35	ATHL1	0.959	1
OR2T35	1q-Del	0.959	1
OR4D10	Amp_11q13.3	0.959	1
PRICKLE3	XBP1	0.959	1
PRICKLE3	OXCT2	0.959	1
PRICKLE3	PAX2	0.959	1
PRICKLE3	RIBC1	0.959	1
PRICKLE3	TTPAL	0.959	1
PRICKLE3	ZBTB7C	0.959	1
PRICKLE3	ZNF362	0.959	1
PRICKLE3	Amp_11q13.3	0.959	1
SHISA4	C15orf39	0.959	1
SHISA4	PSIP1	0.959	1
SHISA4	SLC35B2	0.959	1
SHISA4	TPP2	0.959	1
SHISA4	USP36	0.959	1
SPRR2B	Del_19p13.3	0.959	1
XBP1	ANGPT4	0.959	1
XBP1	1q-Del	0.959	1
AKT2	C15orf39	0.959	1
AKT2	PSIP1	0.959	1
AKT2	SLC35B2	0.959	1
AKT2	TPP2	0.959	1
AKT2	USP36	0.959	1
ANGPT4	OXCT2	0.959	1
ANGPT4	PAX2	0.959	1
ANGPT4	RHBG	0.959	1
ANGPT4	TTPAL	0.959	1
ANGPT4	ZNF362	0.959	1
ANGPT4	Del_9q34.2	0.959	1
ATHL1	OXCT2	0.959	1
ATHL1	PAX2	0.959	1
ATHL1	TTPAL	0.959	1
ATHL1	ZBTB7C	0.959	1
ATHL1	ZNF362	0.959	1
ATHL1	Del_9q34.2	0.959	1
BCORL1	1p-Del	0.959	1
C15orf39	CDC42EP1	0.959	1
C15orf39	MKL1	0.959	1
C15orf39	NBPF9	0.959	1
CDC42EP1	SLC35B2	0.959	1
CDC42EP1	TPP2	0.959	1
DOCK11	9p-Del	0.959	1
KCNN3	20p-Amp	0.959	1
MKL1	PSIP1	0.959	1
MKL1	SLC35B2	0.959	1
MKL1	TPP2	0.959	1
MKL1	USP36	0.959	1
MUC6	Amp_11p13	0.959	1
NBPF9	PSIP1	0.959	1
NBPF9	SLC35B2	0.959	1
NBPF9	TPP2	0.959	1
NBPF9	USP36	0.959	1
NF1	Del_17q21.31	0.959	1
OXCT2	1q-Del	0.959	1
PAX2	1q-Del	0.959	1
RBMX	5p-Amp	0.959	1
RBMX	4p-Del	0.959	1
RBMX	Amp_6q21	0.959	1
RHBG	1q-Del	0.959	1
RIBC1	1q-Del	0.959	1
SDC1	Del_19p13.3	0.959	1
TTPAL	1q-Del	0.959	1
ZBTB7C	1q-Del	0.959	1
ZNF362	1q-Del	0.959	1
16p-Amp	Amp_20q13.2	0.959	1
11p-Del	Del_7q36.1	0.959	1
13q-Del	Amp_10p15.1	0.959	1
6q-Del	Amp_8q24.21	0.959	1
Amp_3q26.32	Amp_17q23.1	0.959	1
Amp_3q26.32	Del_9p23	0.959	1
Amp_12q15	Del_9q34.2	0.959	1
Amp_17q12	Del_13q14.2	0.959	1
Amp_17q23.1	Del_21q11.2	0.959	1
Amp_19q12	Del_4q35.1	0.959	1
ASB10	Amp_10q22.3	0.96	1
C1QTNF5	Del_19q13.32	0.96	1
PIK3R1	PCNXL2	0.96	1
RAB42	Del_13q14.2	0.96	1
TP53	FRMPD2	0.96	1
WSCD2	SPRR2B	0.96	1
WSCD2	SDC1	0.96	1
ZFP36L2	Del_19q13.32	0.96	1
HRNR	Del_1p22.1	0.96	1
MYH9	Amp_17q12	0.96	1
OR4D10	Del_19q13.32	0.96	1
SPRR2B	DLG1	0.96	1
SPRR2B	MLL4	0.96	1
SPRR2B	Del_8p23.2	0.96	1
WDR52	Amp_17q12	0.96	1
ZNF41	22q-Del	0.96	1
ANKRD20A4	Del_19q13.32	0.96	1
C15orf39	Amp_10p15.1	0.96	1
CASZ1	SDC1	0.96	1
DLG1	SDC1	0.96	1
DOCK11	15q-Del	0.96	1
FGFR2	Del_9p23	0.96	1
FGFR2	Del_9q21.11	0.96	1
MLL4	SDC1	0.96	1
SLC35B2	Amp_10p15.1	0.96	1
TFE3	Del_19q13.32	0.96	1
TPP2	Amp_10q22.3	0.96	1
ZMYM3	18p-Del	0.96	1
ZNF687	Amp_12p13.33	0.96	1
20p-Amp	Del_7p22.3	0.96	1
20q-Amp	Del_1p36.13	0.96	1
8p-Amp	11q-Del	0.96	1
13q-Del	Amp_12q15	0.96	1
Amp_3q26.32	Amp_11q13.3	0.96	1
Amp_8p11.23	Del_10q26.3	0.96	1
Amp_8p11.23	Del_22q13.32	0.96	1
Amp_8p11.21	Del_10q23.31	0.96	1
Amp_11p13	Del_15q13.1	0.96	1
Amp_11q14.1	Del_12q23.1	0.96	1
AARS	PTEN	0.961	1
ARID1A	CASP8	0.961	1
ARID1A	MYB	0.961	1
ARID1A	FHOD3	0.961	1
ARID1A	UBC	0.961	1
ARID1A	Del_6q27	0.961	1
EPDR1	15q-Del	0.961	1
EPDR1	Del_20p13	0.961	1
FOXA1	PIK3CA	0.961	1
PTEN	VCPIP1	0.961	1
PTEN	EIF4A2	0.961	1
RPGR	Del_7p22.3	0.961	1
SMAD4	7p-Amp	0.961	1
WSCD2	Amp_3q26.32	0.961	1
DLX6	9q-Del	0.961	1
DLX6	Del_20p13	0.961	1
ERBB3	Del_7p22.3	0.961	1
FHOD3	Del_15q13.1	0.961	1
FXYD5	15q-Del	0.961	1
HRNR	1q-Del	0.961	1
SHISA4	15q-Del	0.961	1
SPRR2B	Del_11p15.5	0.961	1
BCORL1	17p-Del	0.961	1
BCORL1	Del_12q24.31	0.961	1
CDC42EP1	15q-Del	0.961	1
NBPF9	15q-Del	0.961	1
NF1	TGS1	0.961	1
7p-Amp	Amp_12p13.33	0.961	1
18p-Del	Amp_8q24.21	0.961	1
1p-Del	Amp_8q24.21	0.961	1
Amp_1q44	Del_18q23	0.961	1
Amp_6p23	Amp_17q12	0.961	1
AARS	PIK3CA	0.962	1
APC	RB1	0.962	1
FAM86B1	17q-Amp	0.962	1
FAM86B1	Amp_4q13.3	0.962	1
FAM86B1	Del_10q23.31	0.962	1
FOXA1	Amp_11q13.3	0.962	1
HIST1H3B	RUNX1	0.962	1
HIST1H3B	14q-Del	0.962	1
MLL3	RB1	0.962	1
NCOR1	TCP10	0.962	1
NCOR1	GYG2	0.962	1
NCOR1	PSIP1	0.962	1
NCOR1	TPP2	0.962	1
PTEN	16p-Del	0.962	1
RB1	KDM6A	0.962	1
RUNX1	PPEF1	0.962	1
TP53	Del_9p21.3	0.962	1
WSCD2	Amp_1p22.3	0.962	1
AKD1	ANKRD12	0.962	1
AKD1	ERBB3	0.962	1
DST	Del_12p13.1	0.962	1
GPRIN2	17q-Del	0.962	1
GRHL2	Amp_4q13.3	0.962	1
GYG2	Del_10q23.31	0.962	1
MORN1	17q-Amp	0.962	1
PPEF1	17q-Del	0.962	1
PPEF1	Del_21q11.2	0.962	1
ZNF41	17q-Del	0.962	1
C15orf39	Del_10q23.31	0.962	1
KCNN3	Amp_6p23	0.962	1
PSIP1	17q-Amp	0.962	1
SLC35B2	Del_10q23.31	0.962	1
TPP2	17q-Amp	0.962	1
TPP2	Amp_4q13.3	0.962	1
USP36	17q-Amp	0.962	1
USP36	Amp_4q13.3	0.962	1
USP36	Del_10q23.31	0.962	1
ZMYM3	8p-Amp	0.962	1
ZMYM3	18q-Del	0.962	1
ZNF687	Del_21q11.2	0.962	1
16p-Amp	Amp_12p13.33	0.962	1
20q-Amp	11p-Del	0.962	1
8q-Amp	Del_11q23.3	0.962	1
1p-Del	Del_8p23.2	0.962	1
Amp_10q22.3	Del_10q26.3	0.962	1
Amp_12p13.33	Del_6p25.3	0.962	1
Amp_19p13.12	Del_7p22.3	0.962	1
Amp_19p13.12	Del_18q23	0.962	1
AARS	FAM20C	0.963	1
AARS	RAB42	0.963	1
AARS	CCL13	0.963	1
AARS	OR2T35	0.963	1
AARS	OXCT2	0.963	1
AARS	PAX2	0.963	1
AARS	TTPAL	0.963	1
AARS	ZBTB7C	0.963	1
AARS	ZNF362	0.963	1
ACTL6B	Del_6p25.3	0.963	1
AQP12A	HIST1H2BC	0.963	1
AQP12A	KRAS	0.963	1
AQP12A	ICOSLG	0.963	1
AQP12A	MLC1	0.963	1
AQP12A	OR6C76	0.963	1
AQP12A	CABYR	0.963	1
AQP12A	CCDC82	0.963	1
AQP12A	CEP57	0.963	1
AQP12A	CXCR3	0.963	1
AQP12A	RHOA	0.963	1
AQP12A	TARBP2	0.963	1
AQP12A	TCP11	0.963	1
ARID1A	Del_10q26.3	0.963	1
CASP8	SPRR2B	0.963	1
CASP8	SDC1	0.963	1
FAM20C	VCPIP1	0.963	1
FAM20C	ZFP36L1	0.963	1
FAM20C	HLA-C	0.963	1
FAM20C	NFE2L3	0.963	1
FAM20C	KCNN3	0.963	1
FAM86B1	Del_10q26.3	0.963	1
FBXW7	DOCK11	0.963	1
GATA3	MORN1	0.963	1
HIST1H2BC	KRAS	0.963	1
HIST1H2BC	ICOSLG	0.963	1
HIST1H2BC	MLC1	0.963	1
HIST1H2BC	OR6C76	0.963	1
HIST1H2BC	CABYR	0.963	1
HIST1H2BC	CCDC82	0.963	1
HIST1H2BC	CEP57	0.963	1
HIST1H2BC	CXCR3	0.963	1
HIST1H2BC	RHOA	0.963	1
HIST1H2BC	TCP11	0.963	1
HIST1H3B	Amp_1q44	0.963	1
HLA-DRB5	VCPIP1	0.963	1
HLA-DRB5	ZFP36L1	0.963	1
HLA-DRB5	NFE2L3	0.963	1
HLA-DRB5	EIF4A2	0.963	1
HLA-DRB5	KCNN3	0.963	1
KRAS	ICOSLG	0.963	1
KRAS	MLC1	0.963	1
KRAS	OR6C76	0.963	1
KRAS	CABYR	0.963	1
KRAS	CCDC82	0.963	1
KRAS	CEP57	0.963	1
KRAS	CXCR3	0.963	1
KRAS	RHOA	0.963	1
KRAS	TARBP2	0.963	1
KRAS	TCP11	0.963	1
MAP2K4	NCOR1	0.963	1
MAP2K4	Amp_8p11.23	0.963	1
MYB	SPRR2B	0.963	1
MYB	SDC1	0.963	1
PTHLH	Amp_3p25.1	0.963	1
RAB42	VCPIP1	0.963	1
RAB42	ZFP36L1	0.963	1
RAB42	HLA-C	0.963	1
RAB42	NFE2L3	0.963	1
RAB42	EIF4A2	0.963	1
RAB42	KCNN3	0.963	1
RAB42	Amp_8p11.23	0.963	1
SMAD2	Del_7p22.3	0.963	1
TP53	13q-Del	0.963	1
VCPIP1	CCL13	0.963	1
VCPIP1	DST	0.963	1
VCPIP1	OR2T35	0.963	1
VCPIP1	XBP1	0.963	1
VCPIP1	OXCT2	0.963	1
VCPIP1	PAX2	0.963	1
VCPIP1	RHBG	0.963	1
VCPIP1	RIBC1	0.963	1
VCPIP1	TTPAL	0.963	1
VCPIP1	ZNF362	0.963	1
ZFP36L1	CCL13	0.963	1
ZFP36L1	OR2T35	0.963	1
ZFP36L1	XBP1	0.963	1
ZFP36L1	OXCT2	0.963	1
ZFP36L1	PAX2	0.963	1
ZFP36L1	RHBG	0.963	1
ZFP36L1	TTPAL	0.963	1
ZFP36L1	ZBTB7C	0.963	1
ZFP36L1	ZNF362	0.963	1
ZFP36L1	17p-Del	0.963	1
CCL13	HLA-C	0.963	1
CCL13	NFE2L3	0.963	1
CCL13	EIF4A2	0.963	1
CCL13	KCNN3	0.963	1
CCNL2	Amp_3p25.1	0.963	1
DST	NFE2L3	0.963	1
FHOD3	SPRR2B	0.963	1
FHOD3	SDC1	0.963	1
HLA-C	OR2T35	0.963	1
HLA-C	XBP1	0.963	1
HLA-C	PAX2	0.963	1
HLA-C	RIBC1	0.963	1
HLA-C	TTPAL	0.963	1
HLA-C	ZBTB7C	0.963	1
HLA-C	ZNF362	0.963	1
ICOSLG	MLC1	0.963	1
ICOSLG	OR6C76	0.963	1
ICOSLG	CABYR	0.963	1
ICOSLG	CCDC82	0.963	1
ICOSLG	CEP57	0.963	1
ICOSLG	CXCR3	0.963	1
ICOSLG	RHOA	0.963	1
ICOSLG	TCP11	0.963	1
MLC1	OR6C76	0.963	1
MLC1	CABYR	0.963	1
MLC1	CEP57	0.963	1
MLC1	CXCR3	0.963	1
MLC1	TARBP2	0.963	1
MLC1	TCP11	0.963	1
NFE2L3	OR2T35	0.963	1
NFE2L3	OXCT2	0.963	1
NFE2L3	PAX2	0.963	1
NFE2L3	RIBC1	0.963	1
NFE2L3	ZBTB7C	0.963	1
NFE2L3	ZNF362	0.963	1
OR2T35	EIF4A2	0.963	1
OR2T35	KCNN3	0.963	1
OR2T35	Amp_8p11.23	0.963	1
OR6C76	CABYR	0.963	1
OR6C76	CCDC82	0.963	1
OR6C76	CEP57	0.963	1
OR6C76	CXCR3	0.963	1
OR6C76	RHOA	0.963	1
OR6C76	TARBP2	0.963	1
OR6C76	TCP11	0.963	1
PPEF1	Amp_12q15	0.963	1
SPRR2B	UBC	0.963	1
SPRR2B	TGS1	0.963	1
UBC	SDC1	0.963	1
XBP1	KCNN3	0.963	1
ANGPT4	Del_6p25.3	0.963	1
ATHL1	Del_6p25.3	0.963	1
CABYR	CCDC82	0.963	1
CABYR	CEP57	0.963	1
CABYR	CXCR3	0.963	1
CABYR	RHOA	0.963	1
CABYR	TARBP2	0.963	1
CABYR	TCP11	0.963	1
CCDC82	CEP57	0.963	1
CCDC82	CXCR3	0.963	1
CCDC82	TARBP2	0.963	1
CEP57	CXCR3	0.963	1
CEP57	RHOA	0.963	1
CEP57	TARBP2	0.963	1
CEP57	TCP11	0.963	1
CXCR3	RHOA	0.963	1
CXCR3	TARBP2	0.963	1
CXCR3	TCP11	0.963	1
EIF4A2	OXCT2	0.963	1
EIF4A2	PAX2	0.963	1
EIF4A2	RIBC1	0.963	1
EIF4A2	TTPAL	0.963	1
EIF4A2	ZBTB7C	0.963	1
EIF4A2	ZNF362	0.963	1
FRMPD2	SDC1	0.963	1
IRS4	Amp_12q15	0.963	1
KCNN3	OXCT2	0.963	1
KCNN3	PAX2	0.963	1
KCNN3	RHBG	0.963	1
KCNN3	RIBC1	0.963	1
KCNN3	TTPAL	0.963	1
KCNN3	ZBTB7C	0.963	1
KCNN3	ZNF362	0.963	1
MUC6	Amp_13q34	0.963	1
PSIP1	Del_10q26.3	0.963	1
SDC1	TGS1	0.963	1
TARBP2	TCP11	0.963	1
USP36	Del_10q26.3	0.963	1
5p-Amp	Amp_19q12	0.963	1
7p-Amp	Del_19p13.3	0.963	1
8p-Amp	13q-Del	0.963	1
17q-Del	Amp_6q21	0.963	1
8p-Del	Amp_6p23	0.963	1
8p-Del	Del_7q36.1	0.963	1
Amp_6p23	Del_9q21.11	0.963	1
Amp_11p13	Del_6q27	0.963	1
Amp_12q15	Del_4q35.1	0.963	1
Amp_19q13.42	Del_21q11.2	0.963	1
ACTL6B	7q-Amp	0.964	1
AQP12A	Amp_14q21.1	0.964	1
ASB10	4p-Del	0.964	1
C1QTNF5	EPDR1	0.964	1
C1QTNF5	DLX6	0.964	1
C1QTNF5	FBXO17	0.964	1
C1QTNF5	FXYD5	0.964	1
C1QTNF5	SHISA4	0.964	1
C1QTNF5	MKL1	0.964	1
C1QTNF5	NBPF9	0.964	1
C1QTNF5	Del_4q35.1	0.964	1
C1QTNF5	Del_15q13.1	0.964	1
CBFB	CASZ1	0.964	1
EPDR1	PTHLH	0.964	1
EPDR1	SMAD2	0.964	1
EPDR1	SMAD4	0.964	1
EPDR1	ZFP36L2	0.964	1
EPDR1	ATXN7L1	0.964	1
EPDR1	CCNL2	0.964	1
EPDR1	OR4D10	0.964	1
EPDR1	ANKRD20A4	0.964	1
EPDR1	TFE3	0.964	1
FAM20C	Del_2q37.3	0.964	1
FOXA1	MLL4	0.964	1
HIST1H3B	MLL3	0.964	1
MLL3	ZNF41	0.964	1
PTHLH	DLX6	0.964	1
PTHLH	FBXO17	0.964	1
PTHLH	FXYD5	0.964	1
PTHLH	AKT2	0.964	1
PTHLH	CDC42EP1	0.964	1
PTHLH	MKL1	0.964	1
PTHLH	NBPF9	0.964	1
PTHLH	Del_4q35.1	0.964	1
PTHLH	Del_15q13.1	0.964	1
RPGR	Del_15q13.1	0.964	1
SMAD2	DLX6	0.964	1
SMAD2	FBXO17	0.964	1
SMAD2	FXYD5	0.964	1
SMAD2	AKT2	0.964	1
SMAD2	CDC42EP1	0.964	1
SMAD2	MKL1	0.964	1
SMAD2	NBPF9	0.964	1
SMAD4	DLX6	0.964	1
SMAD4	SHISA4	0.964	1
SMAD4	AKT2	0.964	1
SMAD4	CDC42EP1	0.964	1
SMAD4	NBPF9	0.964	1
TBL1XR1	SPEN	0.964	1
TBX3	GPRIN2	0.964	1
TBX3	PPEF1	0.964	1
ZFP36L2	DLX6	0.964	1
ZFP36L2	FBXO17	0.964	1
ZFP36L2	FXYD5	0.964	1
ZFP36L2	SHISA4	0.964	1
ZFP36L2	AKT2	0.964	1
ZFP36L2	CDC42EP1	0.964	1
ZFP36L2	MKL1	0.964	1
ZFP36L2	NBPF9	0.964	1
ZFP36L2	Del_22q13.32	0.964	1
AKD1	Del_9q21.11	0.964	1
ATXN7L1	DLX6	0.964	1
ATXN7L1	FXYD5	0.964	1
ATXN7L1	AKT2	0.964	1
ATXN7L1	CDC42EP1	0.964	1
ATXN7L1	MKL1	0.964	1
ATXN7L1	NBPF9	0.964	1
CCNL2	DLX6	0.964	1
CCNL2	SHISA4	0.964	1
CCNL2	CDC42EP1	0.964	1
CCNL2	NBPF9	0.964	1
DLX6	OR4D10	0.964	1
DLX6	ANKRD20A4	0.964	1
DLX6	MR1	0.964	1
FBXO17	OR4D10	0.964	1
FBXO17	ANKRD20A4	0.964	1
FBXO17	TFE3	0.964	1
FXYD5	OR4D10	0.964	1
FXYD5	ANKRD20A4	0.964	1
FXYD5	MR1	0.964	1
FXYD5	TFE3	0.964	1
ICOSLG	1p-Del	0.964	1
MLC1	1p-Del	0.964	1
OR4D10	AKT2	0.964	1
OR4D10	CDC42EP1	0.964	1
OR4D10	MKL1	0.964	1
OR4D10	NBPF9	0.964	1
PRICKLE3	7q-Amp	0.964	1
SHISA4	ANKRD20A4	0.964	1
SHISA4	MR1	0.964	1
SPRR2B	Del_4q35.1	0.964	1
SPRR2B	Del_15q13.1	0.964	1
AKT2	ANKRD20A4	0.964	1
AKT2	MR1	0.964	1
AKT2	TFE3	0.964	1
ANGPT4	7q-Amp	0.964	1
ANKRD20A4	CDC42EP1	0.964	1
ANKRD20A4	MKL1	0.964	1
ANKRD20A4	NBPF9	0.964	1
ATHL1	SPEN	0.964	1
ATHL1	7q-Amp	0.964	1
BCORL1	Del_18q23	0.964	1
CABYR	1p-Del	0.964	1
CDC42EP1	MR1	0.964	1
CXCR3	Amp_14q21.1	0.964	1
MKL1	MR1	0.964	1
MKL1	TFE3	0.964	1
MR1	NBPF9	0.964	1
NBPF9	TFE3	0.964	1
SDC1	Del_4q35.1	0.964	1
SLC35B2	4p-Del	0.964	1
SPEN	1q-Del	0.964	1
TARBP2	Amp_14q21.1	0.964	1
TCP11	Amp_14q21.1	0.964	1
TFE3	Del_4q35.1	0.964	1
20p-Amp	Amp_14q21.1	0.964	1
7p-Amp	Amp_19q12	0.964	1
16p-Del	Amp_11q14.1	0.964	1
16p-Del	Amp_12q15	0.964	1
16q-Del	Del_7p22.3	0.964	1
16q-Del	Del_9q34.2	0.964	1
16q-Del	Del_12q24.31	0.964	1
17p-Del	Amp_6q21	0.964	1
22q-Del	Del_12q23.1	0.964	1
6q-Del	Amp_8p11.21	0.964	1
9q-Del	Del_21q11.2	0.964	1
Amp_1q21.3	Del_1p22.1	0.964	1
Amp_1q44	Amp_11q13.3	0.964	1
Amp_8p11.23	Del_14q24.1	0.964	1
Amp_10q22.3	Amp_15q26.3	0.964	1
Amp_11q13.3	Del_7q36.1	0.964	1
Amp_14q21.1	Del_1p36.13	0.964	1
Amp_17q12	Del_19q13.32	0.964	1
Amp_17q23.1	Amp_19p13.12	0.964	1
Del_20p13	Del_21q11.2	0.964	1
ACTL6B	Amp_8p11.21	0.965	1
ACTL6B	Del_22q13.32	0.965	1
AQP12A	Del_12q23.1	0.965	1
C1QTNF5	Amp_8p11.21	0.965	1
EPDR1	Amp_15q26.3	0.965	1
ERBB2	6q-Del	0.965	1
MYB	16p-Amp	0.965	1
PIK3CA	SPRR2B	0.965	1
PTHLH	Amp_8p11.21	0.965	1
RB1	Del_10q23.31	0.965	1
SF3B1	7p-Amp	0.965	1
TBL1XR1	Del_22q13.32	0.965	1
TBX3	Del_16q24.3	0.965	1
FXYD5	Amp_15q26.3	0.965	1
ICOSLG	Del_12q23.1	0.965	1
ICOSLG	Del_12q24.31	0.965	1
MLC1	Del_12q24.31	0.965	1
NFE2L3	Del_13q14.2	0.965	1
SHISA4	Amp_15q26.3	0.965	1
ZNF41	Del_19p13.3	0.965	1
CCDC82	Del_12q24.31	0.965	1
CDC42EP1	Amp_15q26.3	0.965	1
KCNN3	Del_1p36.13	0.965	1
MKL1	Amp_15q26.3	0.965	1
NBPF9	Amp_15q26.3	0.965	1
OXCT2	11p-Del	0.965	1
OXCT2	Del_9q34.2	0.965	1
PAX2	Del_9q34.2	0.965	1
RHBG	11p-Del	0.965	1
RHBG	Del_9q34.2	0.965	1
RHOA	Del_12q24.31	0.965	1
SLC35B2	18p-Del	0.965	1
TCP11	Del_12q24.31	0.965	1
15q-Del	Del_18q23	0.965	1
18p-Del	Del_5q21.3	0.965	1
9q-Del	Del_18q23	0.965	1
Amp_11q13.3	Del_10q26.3	0.965	1
Amp_12p13.33	Del_7p22.3	0.965	1
ARID1A	Del_11q23.3	0.966	1
C1QTNF5	Amp_20q13.2	0.966	1
CASP8	1q-Amp	0.966	1
CDKN1B	Del_16q24.3	0.966	1
CTCF	PIWIL1	0.966	1
CTCF	ERBB3	0.966	1
GPS2	SPRR2B	0.966	1
GPS2	SDC1	0.966	1
HIST1H3B	SPRR2B	0.966	1
HIST1H3B	SDC1	0.966	1
MYB	1q-Amp	0.966	1
PIWIL1	ANKRD12	0.966	1
PIWIL1	ERBB3	0.966	1
PIWIL1	1q-Amp	0.966	1
PTPN22	Del_12p13.1	0.966	1
RB1	Del_20p13	0.966	1
RPGR	TAF1L	0.966	1
RPGR	ERBB3	0.966	1
SMAD4	Amp_20q13.2	0.966	1
TAF1L	ANKRD12	0.966	1
TAF1L	TNRC6B	0.966	1
TBL1XR1	Del_12p13.1	0.966	1
TCP10	8p-Amp	0.966	1
THEM5	SDC1	0.966	1
WSCD2	Amp_19q13.42	0.966	1
AKD1	KDM6A	0.966	1
AKD1	17q-Del	0.966	1
ANKRD12	ERBB3	0.966	1
ANKRD12	TNRC6B	0.966	1
CCNL2	16p-Amp	0.966	1
CCNL2	Amp_19p13.12	0.966	1
COL6A5	FHOD3	0.966	1
ERBB3	TNRC6B	0.966	1
GPRIN2	SDC1	0.966	1
PPEF1	SPRR2B	0.966	1
PPEF1	SDC1	0.966	1
SPRR2B	IRS4	0.966	1
SPRR2B	ZNF687	0.966	1
SPRR2B	16p-Amp	0.966	1
SPRR2B	20q-Amp	0.966	1
UBC	20q-Amp	0.966	1
ZNF41	SDC1	0.966	1
ANKRD20A4	Amp_19p13.12	0.966	1
ATHL1	Del_12p13.1	0.966	1
DLG1	5p-Amp	0.966	1
DLG1	Del_10q23.31	0.966	1
FGFR2	SDC1	0.966	1
IRS4	SDC1	0.966	1
MED23	Del_16q24.3	0.966	1
MLL4	Amp_19q13.42	0.966	1
SDC1	ZNF687	0.966	1
TFE3	Amp_19p13.12	0.966	1
TNRC6B	Amp_19p13.12	0.966	1
8q-Amp	Amp_1q21.3	0.966	1
1q-Del	Del_16q24.3	0.966	1
Amp_6q21	Amp_12q15	0.966	1
Amp_19q13.42	Del_7p22.3	0.966	1
Del_6p25.3	Del_12q23.1	0.966	1
Del_12q23.1	Del_22q13.32	0.966	1
ARID1A	HIST1H3B	0.967	1
ARID1A	PPEF1	0.967	1
ARID1A	IRS4	0.967	1
ARID1A	ZNF687	0.967	1
ARID1A	Del_21q11.2	0.967	1
ASB10	FAM20C	0.967	1
ASB10	HLA-DRB5	0.967	1
ASB10	RAB42	0.967	1
ASB10	CCL13	0.967	1
ASB10	OR2T35	0.967	1
ASB10	XBP1	0.967	1
ASB10	OXCT2	0.967	1
ASB10	PAX2	0.967	1
ASB10	RHBG	0.967	1
ASB10	RIBC1	0.967	1
ASB10	TTPAL	0.967	1
ASB10	ZBTB7C	0.967	1
ASB10	ZNF362	0.967	1
ASB10	16p-Del	0.967	1
EPDR1	Del_6q15	0.967	1
FAM20C	FAM86B1	0.967	1
FAM20C	TCP10	0.967	1
FAM20C	GRHL2	0.967	1
FAM20C	GYG2	0.967	1
FAM20C	MORN1	0.967	1
FAM20C	C15orf39	0.967	1
FAM20C	PSIP1	0.967	1
FAM20C	TPP2	0.967	1
FAM20C	USP36	0.967	1
FAM86B1	HLA-DRB5	0.967	1
FAM86B1	RAB42	0.967	1
FAM86B1	CCL13	0.967	1
FAM86B1	OR2T35	0.967	1
FAM86B1	XBP1	0.967	1
FAM86B1	OXCT2	0.967	1
FAM86B1	PAX2	0.967	1
FAM86B1	RHBG	0.967	1
FAM86B1	RIBC1	0.967	1
FAM86B1	TTPAL	0.967	1
FAM86B1	ZBTB7C	0.967	1
FAM86B1	ZNF362	0.967	1
FAM86B1	16p-Del	0.967	1
FBXW7	RB1	0.967	1
GATA3	DLG1	0.967	1
GATA3	MLL4	0.967	1
GATA3	Amp_15q26.3	0.967	1
HIST1H3B	NF1	0.967	1
HIST1H3B	Del_14q24.1	0.967	1
HLA-DRB5	GRHL2	0.967	1
HLA-DRB5	MORN1	0.967	1
HLA-DRB5	C15orf39	0.967	1
HLA-DRB5	PSIP1	0.967	1
HLA-DRB5	SLC35B2	0.967	1
HLA-DRB5	TPP2	0.967	1
HLA-DRB5	USP36	0.967	1
MAP2K4	HLA-C	0.967	1
MAP2K4	EIF4A2	0.967	1
NCOR1	AKD1	0.967	1
NCOR1	HRNR	0.967	1
PTHLH	Amp_11q14.1	0.967	1
RAB42	TCP10	0.967	1
RAB42	GRHL2	0.967	1
RAB42	GYG2	0.967	1
RAB42	MORN1	0.967	1
RAB42	C15orf39	0.967	1
RAB42	PSIP1	0.967	1
RAB42	SLC35B2	0.967	1
RAB42	TPP2	0.967	1
RAB42	USP36	0.967	1
RB1	ABCA8	0.967	1
RB1	Del_10q26.3	0.967	1
SMAD2	Amp_11q14.1	0.967	1
TCP10	OR2T35	0.967	1
TCP10	XBP1	0.967	1
TCP10	PAX2	0.967	1
TCP10	RHBG	0.967	1
TCP10	RIBC1	0.967	1
TCP10	TTPAL	0.967	1
TCP10	ZBTB7C	0.967	1
TCP10	ZNF362	0.967	1
TCP10	16p-Del	0.967	1
TCP10	Del_16q24.3	0.967	1
THEM5	Del_20p13	0.967	1
TP53	RBMX	0.967	1
VCPIP1	Amp_8q24.21	0.967	1
AKD1	Amp_12q15	0.967	1
AKD1	Del_7q36.1	0.967	1
CCL13	GRHL2	0.967	1
CCL13	GYG2	0.967	1
CCL13	C15orf39	0.967	1
CCL13	PSIP1	0.967	1
CCL13	SLC35B2	0.967	1
CCL13	USP36	0.967	1
GRHL2	OR2T35	0.967	1
GRHL2	XBP1	0.967	1
GRHL2	PAX2	0.967	1
GRHL2	RHBG	0.967	1
GRHL2	RIBC1	0.967	1
GRHL2	TTPAL	0.967	1
GRHL2	ZBTB7C	0.967	1
GRHL2	ZNF362	0.967	1
GRHL2	6q-Del	0.967	1
GRHL2	Del_16q24.3	0.967	1
GYG2	OR2T35	0.967	1
GYG2	PAX2	0.967	1
GYG2	TTPAL	0.967	1
GYG2	ZBTB7C	0.967	1
GYG2	ZNF362	0.967	1
GYG2	Del_16q24.3	0.967	1
HRNR	Amp_4q13.3	0.967	1
MLC1	Del_18q23	0.967	1
MORN1	OR2T35	0.967	1
MORN1	XBP1	0.967	1
MORN1	OXCT2	0.967	1
MORN1	PAX2	0.967	1
MORN1	RIBC1	0.967	1
MORN1	TTPAL	0.967	1
MORN1	ZBTB7C	0.967	1
OR2T35	C15orf39	0.967	1
OR2T35	PSIP1	0.967	1
OR2T35	TPP2	0.967	1
OR2T35	USP36	0.967	1
PPEF1	15q-Del	0.967	1
PPEF1	9q-Del	0.967	1
PPEF1	Del_20p13	0.967	1
XBP1	C15orf39	0.967	1
XBP1	SLC35B2	0.967	1
XBP1	TPP2	0.967	1
XBP1	USP36	0.967	1
ZNF41	15q-Del	0.967	1
ZNF41	Del_14q24.1	0.967	1
ANGPT4	Amp_20q13.2	0.967	1
C15orf39	PAX2	0.967	1
C15orf39	RIBC1	0.967	1
C15orf39	TTPAL	0.967	1
C15orf39	ZBTB7C	0.967	1
C15orf39	ZNF362	0.967	1
DLG1	Del_10q26.3	0.967	1
FGFR2	NF1	0.967	1
FGFR2	9q-Del	0.967	1
IRS4	NF1	0.967	1
KCNN3	Amp_8q24.21	0.967	1
MED23	22q-Del	0.967	1
MR1	20q-Amp	0.967	1
MUC6	22q-Del	0.967	1
NBPF9	Del_6q15	0.967	1
OXCT2	PSIP1	0.967	1
OXCT2	TPP2	0.967	1
OXCT2	USP36	0.967	1
PAX2	PSIP1	0.967	1
PAX2	TPP2	0.967	1
PAX2	USP36	0.967	1
PSIP1	RIBC1	0.967	1
PSIP1	TTPAL	0.967	1
PSIP1	ZBTB7C	0.967	1
PSIP1	ZNF362	0.967	1
RHBG	SLC35B2	0.967	1
RHBG	TPP2	0.967	1
RIBC1	SLC35B2	0.967	1
RIBC1	USP36	0.967	1
SLC35B2	TTPAL	0.967	1
SLC35B2	ZBTB7C	0.967	1
SLC35B2	ZNF362	0.967	1
TCP11	Del_18q23	0.967	1
TGS1	Amp_8p11.23	0.967	1
TPP2	TTPAL	0.967	1
TPP2	ZBTB7C	0.967	1
TPP2	ZNF362	0.967	1
TPP2	16p-Del	0.967	1
USP36	ZBTB7C	0.967	1
USP36	ZNF362	0.967	1
15q-Del	Amp_12q15	0.967	1
16p-Del	Amp_6p23	0.967	1
18q-Del	Del_5q11.2	0.967	1
8p-Del	Amp_4q13.3	0.967	1
Amp_12q15	Del_20p13	0.967	1
Amp_13q34	Del_9q21.11	0.967	1
Amp_14q21.1	Del_12p13.1	0.967	1
Amp_15q26.3	Del_12q24.31	0.967	1
ACTL6B	4q-Del	0.968	1
AQP12A	Del_17q21.31	0.968	1
CDKN1B	RUNX1	0.968	1
ERBB2	ATXN2	0.968	1
ERBB2	RBMX	0.968	1
ERBB2	ZMYM3	0.968	1
FAM20C	Del_6p25.3	0.968	1
HLA-DRB5	Amp_11q13.3	0.968	1
PTPN22	RUNX1	0.968	1
PTPN22	4q-Del	0.968	1
RB1	4p-Del	0.968	1
RUNX1	TBL1XR1	0.968	1
RUNX1	PRICKLE3	0.968	1
RUNX1	ATHL1	0.968	1
TP53	DLX6	0.968	1
TP53	SHISA4	0.968	1
TP53	CDC42EP1	0.968	1
ATXN2	DOCK11	0.968	1
NFE2L3	Del_3p21.31	0.968	1
SPRR2B	Del_4p16.3	0.968	1
CEP57	Del_17q21.31	0.968	1
CXCR3	Del_17q21.31	0.968	1
MED23	Del_12q24.31	0.968	1
MLL4	4p-Del	0.968	1
PAX2	Del_6p25.3	0.968	1
RHBG	Amp_11q13.3	0.968	1
RHOA	Del_17q21.31	0.968	1
SDC1	Del_1p22.1	0.968	1
SDC1	Del_4p16.3	0.968	1
TARBP2	Del_17q21.31	0.968	1
TTPAL	Del_6p25.3	0.968	1
ZBTB7C	Amp_11q13.3	0.968	1
17q-Amp	Amp_15q26.3	0.968	1
1q-Amp	7q-Amp	0.968	1
8p-Amp	Amp_11p13	0.968	1
8p-Amp	Del_1p36.13	0.968	1
17q-Del	Amp_3p25.1	0.968	1
1p-Del	Del_11p15.5	0.968	1
1q-Del	4q-Del	0.968	1
4q-Del	Del_16q24.3	0.968	1
Amp_8p11.23	Amp_19p13.12	0.968	1
Amp_8p11.23	Del_2q37.3	0.968	1
Del_11p15.5	Del_16q24.3	0.968	1
Del_12q24.31	Del_19p13.3	0.968	1
AARS	HRNR	0.969	1
ACTL6B	MAP3K1	0.969	1
ACTL6B	SPRR2B	0.969	1
ACTL6B	SDC1	0.969	1
ACTL6B	16q-Del	0.969	1
APC	ANKRD12	0.969	1
AQP12A	EPDR1	0.969	1
AQP12A	DLX6	0.969	1
AQP12A	FBXO17	0.969	1
AQP12A	FXYD5	0.969	1
AQP12A	SHISA4	0.969	1
AQP12A	AKT2	0.969	1
AQP12A	CDC42EP1	0.969	1
AQP12A	MKL1	0.969	1
AQP12A	NBPF9	0.969	1
ARID1A	Del_8p23.2	0.969	1
CASP8	CBFB	0.969	1
CBFB	FHOD3	0.969	1
CBFB	TGS1	0.969	1
CDH1	FHOD3	0.969	1
CDKN1B	SPRR2B	0.969	1
CDKN1B	SDC1	0.969	1
CTCF	DNAH12	0.969	1
EPDR1	HIST1H2BC	0.969	1
EPDR1	KRAS	0.969	1
EPDR1	ICOSLG	0.969	1
EPDR1	MLC1	0.969	1
EPDR1	OR6C76	0.969	1
EPDR1	CABYR	0.969	1
EPDR1	CCDC82	0.969	1
EPDR1	CEP57	0.969	1
EPDR1	CXCR3	0.969	1
EPDR1	RHOA	0.969	1
EPDR1	TCP11	0.969	1
FOXA1	FHOD3	0.969	1
FOXA1	UBC	0.969	1
FOXA1	TGS1	0.969	1
HIST1H2BC	DLX6	0.969	1
HIST1H2BC	FBXO17	0.969	1
HIST1H2BC	FXYD5	0.969	1
HIST1H2BC	SHISA4	0.969	1
HIST1H2BC	AKT2	0.969	1
HIST1H2BC	CDC42EP1	0.969	1
HIST1H2BC	MKL1	0.969	1
HIST1H2BC	NBPF9	0.969	1
KRAS	DLX6	0.969	1
KRAS	FBXO17	0.969	1
KRAS	FXYD5	0.969	1
KRAS	SHISA4	0.969	1
KRAS	AKT2	0.969	1
KRAS	CDC42EP1	0.969	1
KRAS	MKL1	0.969	1
KRAS	NBPF9	0.969	1
MAP3K1	PRICKLE3	0.969	1
PIK3CA	DOCK11	0.969	1
PIWIL1	SF3B1	0.969	1
PIWIL1	DNAH12	0.969	1
PIWIL1	MYH9	0.969	1
PIWIL1	20q-Amp	0.969	1
PTEN	TCP10	0.969	1
PTEN	DST	0.969	1
PTEN	PSIP1	0.969	1
PTEN	SLC35B2	0.969	1
PTEN	TPP2	0.969	1
PTHLH	Del_5q11.2	0.969	1
PTPN22	SPRR2B	0.969	1
PTPN22	SDC1	0.969	1
RB1	16p-Del	0.969	1
RPGR	SF3B1	0.969	1
RPGR	MYH9	0.969	1
RPGR	20q-Amp	0.969	1
SF3B1	ERBB3	0.969	1
SMAD4	Del_4p16.3	0.969	1
TAF1L	4q-Del	0.969	1
TBL1XR1	SPRR2B	0.969	1
TBL1XR1	SDC1	0.969	1
TBL1XR1	16q-Del	0.969	1
ZFP36L1	Del_2q37.3	0.969	1
ABCA8	Del_19q13.32	0.969	1
AKD1	Amp_1p22.3	0.969	1
ANKRD12	DNAH12	0.969	1
ANKRD12	KDM6A	0.969	1
ATXN7L1	Del_5q11.2	0.969	1
COL6A5	13q-Del	0.969	1
DLX6	ICOSLG	0.969	1
DLX6	OR6C76	0.969	1
DLX6	CABYR	0.969	1
DLX6	CCDC82	0.969	1
DLX6	CEP57	0.969	1
DLX6	CXCR3	0.969	1
DLX6	RHOA	0.969	1
DLX6	TARBP2	0.969	1
DLX6	TCP11	0.969	1
ERBB3	WDR52	0.969	1
ERBB3	Amp_11q14.1	0.969	1
FBXO17	ICOSLG	0.969	1
FBXO17	MLC1	0.969	1
FBXO17	OR6C76	0.969	1
FBXO17	CCDC82	0.969	1
FBXO17	CEP57	0.969	1
FBXO17	CXCR3	0.969	1
FBXO17	RHOA	0.969	1
FBXO17	TARBP2	0.969	1
FBXO17	TCP11	0.969	1
FXYD5	ICOSLG	0.969	1
FXYD5	MLC1	0.969	1
FXYD5	OR6C76	0.969	1
FXYD5	CABYR	0.969	1
FXYD5	CEP57	0.969	1
FXYD5	CXCR3	0.969	1
FXYD5	TARBP2	0.969	1
FXYD5	5q-Del	0.969	1
HLA-C	HRNR	0.969	1
ICOSLG	SHISA4	0.969	1
ICOSLG	AKT2	0.969	1
ICOSLG	CDC42EP1	0.969	1
ICOSLG	MKL1	0.969	1
ICOSLG	NBPF9	0.969	1
MLC1	SHISA4	0.969	1
MLC1	AKT2	0.969	1
MLC1	CDC42EP1	0.969	1
MLC1	MKL1	0.969	1
MLC1	NBPF9	0.969	1
NFE2L3	Amp_8p11.23	0.969	1
OR2T35	Amp_8q24.21	0.969	1
OR2T35	Del_12p13.1	0.969	1
OR6C76	SHISA4	0.969	1
OR6C76	AKT2	0.969	1
OR6C76	CDC42EP1	0.969	1
OR6C76	NBPF9	0.969	1
PRICKLE3	SPRR2B	0.969	1
PRICKLE3	SDC1	0.969	1
PRICKLE3	Amp_12p13.33	0.969	1
PRICKLE3	Del_9q21.11	0.969	1
SHISA4	CABYR	0.969	1
SHISA4	CCDC82	0.969	1
SHISA4	CEP57	0.969	1
SHISA4	CXCR3	0.969	1
SHISA4	RHOA	0.969	1
SHISA4	TARBP2	0.969	1
SHISA4	TCP11	0.969	1
SHISA4	5q-Del	0.969	1
SPRR2B	ANGPT4	0.969	1
SPRR2B	ATHL1	0.969	1
SPRR2B	1q-Del	0.969	1
SPRR2B	Amp_3q26.32	0.969	1
XBP1	Amp_8q24.21	0.969	1
XBP1	Del_12p13.1	0.969	1
AKT2	CABYR	0.969	1
AKT2	CCDC82	0.969	1
AKT2	CEP57	0.969	1
AKT2	CXCR3	0.969	1
AKT2	RHOA	0.969	1
AKT2	TARBP2	0.969	1
AKT2	TCP11	0.969	1
ANGPT4	SDC1	0.969	1
ANGPT4	Del_18q23	0.969	1
ATHL1	SDC1	0.969	1
CABYR	CDC42EP1	0.969	1
CABYR	MKL1	0.969	1
CABYR	NBPF9	0.969	1
CCDC82	CDC42EP1	0.969	1
CCDC82	NBPF9	0.969	1
CDC42EP1	RHOA	0.969	1
CDC42EP1	TARBP2	0.969	1
CDC42EP1	TCP11	0.969	1
CEP57	MKL1	0.969	1
CEP57	NBPF9	0.969	1
CXCR3	MKL1	0.969	1
CXCR3	NBPF9	0.969	1
KCNN3	Del_2q37.3	0.969	1
MKL1	TARBP2	0.969	1
MLL4	18p-Del	0.969	1
NBPF9	RHOA	0.969	1
NBPF9	TARBP2	0.969	1
NBPF9	TCP11	0.969	1
NBPF9	5q-Del	0.969	1
RBMX	Del_5q21.3	0.969	1
RHBG	Del_12p13.1	0.969	1
SDC1	1q-Del	0.969	1
TFE3	Del_4p16.3	0.969	1
TTPAL	Amp_8q24.21	0.969	1
17q-Amp	Del_6q27	0.969	1
20q-Amp	Amp_11p13	0.969	1
11p-Del	Del_20p13	0.969	1
16q-Del	1q-Del	0.969	1
18q-Del	Amp_17q12	0.969	1
4p-Del	Amp_4q13.3	0.969	1
9q-Del	Amp_8q24.21	0.969	1
Amp_3p25.1	Amp_11q13.3	0.969	1
Amp_6q21	Amp_11q14.1	0.969	1
Amp_8q24.21	Amp_11q14.1	0.969	1
Amp_11q13.3	Del_2q37.3	0.969	1
Del_1p36.13	Del_12q24.31	0.969	1
ACTL6B	TBX3	0.97	1
AQP12A	Del_9p23	0.97	1
ARID1A	Amp_1q44	0.97	1
C1QTNF5	CDH1	0.97	1
CDH1	OR4D10	0.97	1
CDH1	TFE3	0.97	1
CDKN1B	TBX3	0.97	1
GATA3	Amp_12q15	0.97	1
MAP3K1	ERBB3	0.97	1
NCOR1	PTHLH	0.97	1
NCOR1	SMAD4	0.97	1
NCOR1	ATXN7L1	0.97	1
PTEN	Del_18q23	0.97	1
RAB42	Amp_1q44	0.97	1
RUNX1	Amp_1q44	0.97	1
SMAD4	17q-Amp	0.97	1
SMAD4	Amp_4q13.3	0.97	1
TAF1L	Amp_10q22.3	0.97	1
TBX3	ATHL1	0.97	1
TCP10	20p-Amp	0.97	1
TP53	ANKRD20A4	0.97	1
ZFP36L2	17q-Amp	0.97	1
ABCA8	AKD1	0.97	1
AKD1	BCORL1	0.97	1
ATXN7L1	Amp_4q13.3	0.97	1
CCNL2	17q-Amp	0.97	1
DLX6	Del_6q27	0.97	1
DST	GYG2	0.97	1
DST	PSIP1	0.97	1
DST	TPP2	0.97	1
FHOD3	5q-Del	0.97	1
HLA-C	SPEN	0.97	1
NFE2L3	SPEN	0.97	1
NFE2L3	7q-Amp	0.97	1
XBP1	Amp_1q44	0.97	1
ANGPT4	Del_17q21.31	0.97	1
ANKRD20A4	Amp_4q13.3	0.97	1
ATHL1	Del_17q21.31	0.97	1
CABYR	Del_9p23	0.97	1
CDC42EP1	Del_6q27	0.97	1
CEP57	Del_9p23	0.97	1
CEP57	Del_19q13.32	0.97	1
DLG1	Amp_20q13.2	0.97	1
KCNN3	Del_9q34.2	0.97	1
MLL4	18q-Del	0.97	1
MR1	17q-Amp	0.97	1
MR1	Amp_4q13.3	0.97	1
RHOA	Del_19q13.32	0.97	1
TFE3	17q-Amp	0.97	1
ZBTB7C	Amp_1q44	0.97	1
8q-Amp	Amp_12p13.33	0.97	1
11p-Del	18q-Del	0.97	1
11q-Del	Amp_12q15	0.97	1
14q-Del	Del_12p13.1	0.97	1
17q-Del	Amp_13q34	0.97	1
18q-Del	Amp_12p13.33	0.97	1
18q-Del	Del_9q34.2	0.97	1
8p-Del	Del_6p25.3	0.97	1
9p-Del	Amp_12q15	0.97	1
9q-Del	Del_19q13.32	0.97	1
Amp_8p11.21	Del_6q27	0.97	1
Amp_10p15.1	Del_7p22.3	0.97	1
Amp_10q22.3	Del_6p25.3	0.97	1
Amp_14q21.1	Del_19q13.32	0.97	1
Amp_19p13.12	Del_4p16.3	0.97	1
Amp_19q12	Del_12p13.1	0.97	1
Del_12p13.1	Del_12q23.1	0.97	1
Del_12p13.1	Del_12q24.31	0.97	1
Del_12p13.1	Del_21q11.2	0.97	1
ARID1A	MLL3	0.971	1
C1QTNF5	FAM20C	0.971	1
C1QTNF5	HLA-DRB5	0.971	1
C1QTNF5	RAB42	0.971	1
C1QTNF5	CCL13	0.971	1
C1QTNF5	OR2T35	0.971	1
C1QTNF5	XBP1	0.971	1
C1QTNF5	OXCT2	0.971	1
C1QTNF5	PAX2	0.971	1
C1QTNF5	RHBG	0.971	1
C1QTNF5	RIBC1	0.971	1
C1QTNF5	TTPAL	0.971	1
C1QTNF5	ZBTB7C	0.971	1
C1QTNF5	ZNF362	0.971	1
EPDR1	Amp_19q13.42	0.971	1
FAM20C	PTHLH	0.971	1
FAM20C	SMAD2	0.971	1
FAM20C	SMAD4	0.971	1
FAM20C	ZFP36L2	0.971	1
FAM20C	CCNL2	0.971	1
FAM20C	OR4D10	0.971	1
FAM20C	ANKRD20A4	0.971	1
FAM20C	MR1	0.971	1
FAM20C	TFE3	0.971	1
HLA-DRB5	SMAD4	0.971	1
HLA-DRB5	ZFP36L2	0.971	1
HLA-DRB5	CCNL2	0.971	1
HLA-DRB5	ANKRD20A4	0.971	1
HLA-DRB5	MR1	0.971	1
PTHLH	RAB42	0.971	1
PTHLH	CCL13	0.971	1
PTHLH	OR2T35	0.971	1
PTHLH	XBP1	0.971	1
PTHLH	OXCT2	0.971	1
PTHLH	PAX2	0.971	1
PTHLH	RHBG	0.971	1
PTHLH	TTPAL	0.971	1
PTHLH	ZBTB7C	0.971	1
PTHLH	ZNF362	0.971	1
RAB42	SMAD2	0.971	1
RAB42	SMAD4	0.971	1
RAB42	ZFP36L2	0.971	1
RAB42	ATXN7L1	0.971	1
RAB42	CCNL2	0.971	1
RAB42	OR4D10	0.971	1
RAB42	ANKRD20A4	0.971	1
RAB42	MR1	0.971	1
RAB42	TFE3	0.971	1
RB1	ATXN2	0.971	1
RB1	RBMX	0.971	1
RB1	ZMYM3	0.971	1
RPGR	Del_9p21.3	0.971	1
SMAD2	CCL13	0.971	1
SMAD2	OR2T35	0.971	1
SMAD2	XBP1	0.971	1
SMAD2	OXCT2	0.971	1
SMAD2	PAX2	0.971	1
SMAD2	RHBG	0.971	1
SMAD2	TTPAL	0.971	1
SMAD2	ZBTB7C	0.971	1
SMAD2	ZNF362	0.971	1
SMAD4	CCL13	0.971	1
SMAD4	OR2T35	0.971	1
SMAD4	OXCT2	0.971	1
SMAD4	PAX2	0.971	1
SMAD4	RIBC1	0.971	1
SMAD4	TTPAL	0.971	1
SMAD4	ZBTB7C	0.971	1
SMAD4	ZNF362	0.971	1
TCP10	13q-Del	0.971	1
THEM5	COL6A5	0.971	1
ZFP36L2	OR2T35	0.971	1
ZFP36L2	XBP1	0.971	1
ZFP36L2	OXCT2	0.971	1
ZFP36L2	PAX2	0.971	1
ZFP36L2	RHBG	0.971	1
ZFP36L2	RIBC1	0.971	1
ZFP36L2	TTPAL	0.971	1
ZFP36L2	ZNF362	0.971	1
ATXN7L1	CCL13	0.971	1
ATXN7L1	OR2T35	0.971	1
ATXN7L1	OXCT2	0.971	1
ATXN7L1	PAX2	0.971	1
ATXN7L1	TTPAL	0.971	1
ATXN7L1	ZBTB7C	0.971	1
ATXN7L1	ZNF362	0.971	1
ATXN7L1	Amp_3q26.32	0.971	1
CCL13	CCNL2	0.971	1
CCL13	OR4D10	0.971	1
CCL13	ANKRD20A4	0.971	1
CCL13	MR1	0.971	1
CCL13	TFE3	0.971	1
CCNL2	OR2T35	0.971	1
CCNL2	OXCT2	0.971	1
CCNL2	PAX2	0.971	1
CCNL2	TTPAL	0.971	1
CCNL2	ZBTB7C	0.971	1
CCNL2	ZNF362	0.971	1
CCNL2	Amp_3q26.32	0.971	1
COL6A5	ZNF687	0.971	1
DLX6	5p-Amp	0.971	1
DLX6	Amp_11p13	0.971	1
FXYD5	Amp_6q21	0.971	1
OR2T35	OR4D10	0.971	1
OR2T35	ANKRD20A4	0.971	1
OR2T35	MR1	0.971	1
OR2T35	TFE3	0.971	1
OR4D10	XBP1	0.971	1
OR4D10	OXCT2	0.971	1
OR4D10	PAX2	0.971	1
OR4D10	RHBG	0.971	1
OR4D10	TTPAL	0.971	1
OR4D10	ZNF362	0.971	1
PRICKLE3	14q-Del	0.971	1
PRICKLE3	17q-Del	0.971	1
SHISA4	Amp_11p13	0.971	1
XBP1	ANKRD20A4	0.971	1
XBP1	TFE3	0.971	1
AKT2	Amp_19q13.42	0.971	1
ANKRD20A4	OXCT2	0.971	1
ANKRD20A4	PAX2	0.971	1
ANKRD20A4	RHBG	0.971	1
ANKRD20A4	RIBC1	0.971	1
ANKRD20A4	TTPAL	0.971	1
ANKRD20A4	ZBTB7C	0.971	1
ANKRD20A4	ZNF362	0.971	1
ATHL1	14q-Del	0.971	1
BCORL1	Amp_17q12	0.971	1
MKL1	5p-Amp	0.971	1
MR1	OXCT2	0.971	1
MR1	PAX2	0.971	1
MR1	ZBTB7C	0.971	1
MR1	ZNF362	0.971	1
NF1	7p-Amp	0.971	1
OXCT2	4q-Del	0.971	1
OXCT2	Del_22q13.32	0.971	1
PAX2	TFE3	0.971	1
PAX2	4q-Del	0.971	1
PAX2	Del_22q13.32	0.971	1
RHBG	TFE3	0.971	1
RHOA	17p-Del	0.971	1
TFE3	TTPAL	0.971	1
TFE3	ZBTB7C	0.971	1
USP36	Del_5q21.3	0.971	1
ZNF362	4q-Del	0.971	1
7p-Amp	Amp_1q21.3	0.971	1
11q-Del	Del_2q37.3	0.971	1
17q-Del	1q-Del	0.971	1
18p-Del	Del_19q13.32	0.971	1
18q-Del	Amp_1q21.3	0.971	1
Amp_3p25.1	Amp_13q34	0.971	1
Amp_3p25.1	Del_13q14.2	0.971	1
Amp_3q26.32	Del_12q24.31	0.971	1
Amp_14q21.1	Del_9p21.3	0.971	1
AARS	SPRR2B	0.972	1
AARS	SDC1	0.972	1
AQP12A	Del_16q24.3	0.972	1
ARID1A	CDKN1B	0.972	1
ARID1A	ANGPT4	0.972	1
ARID1A	ATHL1	0.972	1
CDH1	TAF1L	0.972	1
CDH1	ANKRD12	0.972	1
EPDR1	Del_1p36.13	0.972	1
FAM20C	17q-Del	0.972	1
FAM20C	Amp_12p13.33	0.972	1
FAM20C	Del_9q21.11	0.972	1
FBXW7	Amp_3p25.1	0.972	1
FBXW7	Del_7p22.3	0.972	1
HIST1H2BC	Del_13q14.2	0.972	1
MAP2K4	8p-Amp	0.972	1
MAP3K1	OR2T35	0.972	1
MAP3K1	XBP1	0.972	1
NCOR1	PIWIL1	0.972	1
NCOR1	ERBB3	0.972	1
PIWIL1	17q-Amp	0.972	1
PTPN22	NF1	0.972	1
RAB42	Amp_8p11.21	0.972	1
RAB42	Amp_19q12	0.972	1
SMAD2	Amp_1p22.3	0.972	1
THEM5	Amp_15q26.3	0.972	1
TP53	SDC1	0.972	1
VCPIP1	SPRR2B	0.972	1
VCPIP1	SDC1	0.972	1
WSCD2	DOCK11	0.972	1
ZFP36L1	SPRR2B	0.972	1
ZFP36L1	SDC1	0.972	1
ABCA8	Amp_3p25.1	0.972	1
ABCA8	Del_7p22.3	0.972	1
AKD1	Del_10q23.31	0.972	1
CCL13	Del_21q11.2	0.972	1
DLX6	Del_1p36.13	0.972	1
DST	Del_7q36.1	0.972	1
ERBB3	11q-Del	0.972	1
ERBB3	17q-Del	0.972	1
ERBB3	Amp_19q12	0.972	1
ERBB3	Del_1p22.1	0.972	1
FBXO17	1q-Amp	0.972	1
HLA-C	SPRR2B	0.972	1
HLA-C	SDC1	0.972	1
ICOSLG	7p-Amp	0.972	1
MLC1	Del_13q14.2	0.972	1
NFE2L3	SPRR2B	0.972	1
NFE2L3	SDC1	0.972	1
OR2T35	Amp_20q13.2	0.972	1
PRICKLE3	NF1	0.972	1
SPRR2B	EIF4A2	0.972	1
SPRR2B	KCNN3	0.972	1
XBP1	Amp_20q13.2	0.972	1
ZNF41	Amp_15q26.3	0.972	1
ZNF41	Del_4q35.1	0.972	1
AKT2	1q-Amp	0.972	1
ATHL1	Amp_12q15	0.972	1
BCORL1	Amp_3p25.1	0.972	1
CASZ1	DOCK11	0.972	1
CDC42EP1	1q-Amp	0.972	1
CXCR3	Del_16q24.3	0.972	1
DLG1	DOCK11	0.972	1
DOCK11	MLL4	0.972	1
FGFR2	Amp_15q26.3	0.972	1
FGFR2	Del_4q35.1	0.972	1
IRS4	Amp_15q26.3	0.972	1
KCNN3	SDC1	0.972	1
MKL1	1q-Amp	0.972	1
NBPF9	1q-Amp	0.972	1
NBPF9	Del_1p36.13	0.972	1
NF1	1q-Del	0.972	1
OXCT2	14q-Del	0.972	1
OXCT2	17q-Del	0.972	1
OXCT2	Del_9q21.11	0.972	1
PAX2	Amp_12p13.33	0.972	1
PAX2	Amp_19q12	0.972	1
PAX2	Del_9q21.11	0.972	1
PAX2	Del_21q11.2	0.972	1
RHBG	Amp_19q12	0.972	1
RHOA	Del_16q24.3	0.972	1
RIBC1	Del_9q21.11	0.972	1
TARBP2	7p-Amp	0.972	1
TNRC6B	14q-Del	0.972	1
TTPAL	Amp_20q13.2	0.972	1
TTPAL	Del_21q11.2	0.972	1
ZNF362	Amp_12p13.33	0.972	1
ZNF362	Amp_19q12	0.972	1
ZNF362	Del_21q11.2	0.972	1
1q-Amp	18q-Del	0.972	1
20q-Amp	Del_10q23.31	0.972	1
5p-Amp	Del_4p16.3	0.972	1
5p-Amp	Del_5q11.2	0.972	1
7q-Amp	Amp_10p15.1	0.972	1
13q-Del	Amp_11q14.1	0.972	1
1q-Del	Amp_12q15	0.972	1
6q-Del	Del_1p22.1	0.972	1
Amp_12q15	Del_19p13.3	0.972	1
Amp_17q12	Del_3p21.31	0.972	1
Amp_20q13.2	Del_3p21.31	0.972	1
APC	SF3B1	0.973	1
ARID1A	11q-Del	0.973	1
FBXW7	PIWIL1	0.973	1
FBXW7	RPGR	0.973	1
FBXW7	TAF1L	0.973	1
GATA3	MLL3	0.973	1
MLL3	TBL1XR1	0.973	1
MLL3	ATHL1	0.973	1
MYB	Amp_10p15.1	0.973	1
PIK3R1	RPGR	0.973	1
PIK3R1	TAF1L	0.973	1
PIK3R1	ANKRD12	0.973	1
PIWIL1	ABCA8	0.973	1
PIWIL1	BCORL1	0.973	1
RAB42	Amp_12q15	0.973	1
RAB42	Del_7q36.1	0.973	1
RPGR	ABCA8	0.973	1
SF3B1	MYH9	0.973	1
SF3B1	WDR52	0.973	1
SF3B1	KDM6A	0.973	1
SMAD4	Amp_10p15.1	0.973	1
TAF1L	BCORL1	0.973	1
TAF1L	17p-Del	0.973	1
TBX3	COL6A5	0.973	1
VCPIP1	Amp_1q21.3	0.973	1
ZFP36L2	22q-Del	0.973	1
ABCA8	ERBB3	0.973	1
AKD1	Amp_1q44	0.973	1
CCL13	Amp_1q21.3	0.973	1
COL6A5	Del_10q23.31	0.973	1
DNAH12	WDR52	0.973	1
ERBB3	BCORL1	0.973	1
FHOD3	Amp_11p13	0.973	1
FHOD3	Amp_19q13.42	0.973	1
ICOSLG	Del_7p22.3	0.973	1
MLC1	Del_7p22.3	0.973	1
MLC1	Del_19p13.3	0.973	1
MYH9	WDR52	0.973	1
NFE2L3	Del_6p25.3	0.973	1
OR2T35	Amp_12q15	0.973	1
SHISA4	Amp_13q34	0.973	1
SPRR2B	18p-Del	0.973	1
SPRR2B	4p-Del	0.973	1
UBC	5p-Amp	0.973	1
WDR52	KDM6A	0.973	1
WDR52	Amp_20q13.2	0.973	1
XBP1	Amp_1q21.3	0.973	1
BCORL1	11p-Del	0.973	1
CABYR	Amp_3p25.1	0.973	1
EIF4A2	Del_6p25.3	0.973	1
KCNN3	Del_6p25.3	0.973	1
NBPF9	Amp_13q34	0.973	1
OXCT2	Del_7q36.1	0.973	1
PAX2	8p-Del	0.973	1
RHOA	Del_19p13.3	0.973	1
RIBC1	Amp_12q15	0.973	1
SDC1	4p-Del	0.973	1
TCP11	Amp_3p25.1	0.973	1
TTPAL	Amp_12q15	0.973	1
ZNF362	Amp_12q15	0.973	1
5p-Amp	Del_19p13.3	0.973	1
8p-Amp	Amp_19q12	0.973	1
11p-Del	Amp_8p11.23	0.973	1
11p-Del	Amp_20q13.2	0.973	1
11p-Del	Del_19q13.32	0.973	1
15q-Del	Amp_19q13.42	0.973	1
18q-Del	Del_21q11.2	0.973	1
4q-Del	Del_6q15	0.973	1
9q-Del	Amp_8p11.21	0.973	1
Amp_1p22.3	Del_18q23	0.973	1
Amp_6q21	Del_19p13.3	0.973	1
Amp_13q34	Amp_19q13.42	0.973	1
Amp_17q12	Del_19p13.3	0.973	1
Amp_19q13.42	Del_20p13	0.973	1
Del_5q11.2	Del_21q11.2	0.973	1
Del_18q23	Del_21q11.2	0.973	1
ASB10	MAP2K4	0.974	1
CASP8	PCNXL2	0.974	1
CBFB	GPS2	0.974	1
CBFB	PPEF1	0.974	1
EPDR1	DLX6	0.974	1
EPDR1	FBXO17	0.974	1
EPDR1	FXYD5	0.974	1
EPDR1	SHISA4	0.974	1
EPDR1	AKT2	0.974	1
EPDR1	CDC42EP1	0.974	1
EPDR1	MKL1	0.974	1
EPDR1	NBPF9	0.974	1
FOXA1	GPS2	0.974	1
FOXA1	HIST1H3B	0.974	1
FOXA1	PPEF1	0.974	1
FOXA1	ZNF41	0.974	1
FOXA1	IRS4	0.974	1
HLA-DRB5	MLL3	0.974	1
MLL3	PIWIL1	0.974	1
MLL3	RPGR	0.974	1
MLL3	ERBB3	0.974	1
MLL3	XBP1	0.974	1
MLL3	RHBG	0.974	1
MLL3	TTPAL	0.974	1
MLL3	ZNF362	0.974	1
PIWIL1	Amp_17q23.1	0.974	1
RUNX1	VCPIP1	0.974	1
RUNX1	EIF4A2	0.974	1
SMAD4	1q-Amp	0.974	1
SMAD4	Amp_17q23.1	0.974	1
TP53	VCPIP1	0.974	1
TP53	NFE2L3	0.974	1
AKD1	MUC6	0.974	1
AKD1	ZMYM3	0.974	1
ATXN2	Del_17q21.31	0.974	1
DLX6	FBXO17	0.974	1
DLX6	FXYD5	0.974	1
DLX6	SHISA4	0.974	1
DLX6	AKT2	0.974	1
DLX6	CDC42EP1	0.974	1
DLX6	MKL1	0.974	1
DLX6	NBPF9	0.974	1
DLX6	Del_9p21.3	0.974	1
FBXO17	FXYD5	0.974	1
FBXO17	SHISA4	0.974	1
FBXO17	CDC42EP1	0.974	1
FBXO17	MKL1	0.974	1
FBXO17	NBPF9	0.974	1
FHOD3	PCNXL2	0.974	1
FXYD5	SHISA4	0.974	1
FXYD5	AKT2	0.974	1
FXYD5	CDC42EP1	0.974	1
FXYD5	NBPF9	0.974	1
FXYD5	Del_3p21.31	0.974	1
GPRIN2	16p-Amp	0.974	1
PPEF1	Amp_17q12	0.974	1
SHISA4	AKT2	0.974	1
SHISA4	CDC42EP1	0.974	1
SHISA4	MKL1	0.974	1
SHISA4	NBPF9	0.974	1
SHISA4	Del_3p21.31	0.974	1
SPRR2B	18q-Del	0.974	1
UBC	PCNXL2	0.974	1
AKT2	CDC42EP1	0.974	1
AKT2	MKL1	0.974	1
AKT2	NBPF9	0.974	1
AKT2	Del_9p21.3	0.974	1
CDC42EP1	MKL1	0.974	1
CDC42EP1	NBPF9	0.974	1
MKL1	NBPF9	0.974	1
MLL4	Del_12q24.31	0.974	1
MR1	1q-Amp	0.974	1
NBPF9	Del_3p21.31	0.974	1
SDC1	8p-Amp	0.974	1
7p-Amp	8q-Amp	0.974	1
15q-Del	Amp_1q44	0.974	1
Amp_10q22.3	Del_17q21.31	0.974	1
Amp_19p13.12	Del_21q11.2	0.974	1
ACTL6B	22q-Del	0.975	1
ACTL6B	Del_20p13	0.975	1
AQP12A	FAM20C	0.975	1
AQP12A	RAB42	0.975	1
AQP12A	CCL13	0.975	1
AQP12A	OR2T35	0.975	1
AQP12A	XBP1	0.975	1
AQP12A	PAX2	0.975	1
AQP12A	RHBG	0.975	1
AQP12A	RIBC1	0.975	1
AQP12A	TTPAL	0.975	1
AQP12A	ZBTB7C	0.975	1
AQP12A	ZNF362	0.975	1
AQP12A	Del_11p15.5	0.975	1
ARID1A	Amp_8p11.21	0.975	1
ASB10	SPRR2B	0.975	1
ASB10	SDC1	0.975	1
CASP8	GATA3	0.975	1
CBFB	Amp_1p22.3	0.975	1
EPDR1	Amp_14q21.1	0.975	1
FAM20C	HIST1H2BC	0.975	1
FAM20C	KRAS	0.975	1
FAM20C	ICOSLG	0.975	1
FAM20C	MLC1	0.975	1
FAM20C	OR6C76	0.975	1
FAM20C	CABYR	0.975	1
FAM20C	CCDC82	0.975	1
FAM20C	CEP57	0.975	1
FAM20C	RHOA	0.975	1
FAM20C	TARBP2	0.975	1
FAM20C	TCP11	0.975	1
FAM20C	9q-Del	0.975	1
FAM20C	Del_20p13	0.975	1
FAM86B1	SPRR2B	0.975	1
FAM86B1	SDC1	0.975	1
GATA3	PTHLH	0.975	1
GATA3	SMAD4	0.975	1
GATA3	CCNL2	0.975	1
HIST1H2BC	HLA-DRB5	0.975	1
HIST1H2BC	RAB42	0.975	1
HIST1H2BC	CCL13	0.975	1
HIST1H2BC	XBP1	0.975	1
HIST1H2BC	OXCT2	0.975	1
HIST1H2BC	PAX2	0.975	1
HIST1H2BC	RHBG	0.975	1
HIST1H2BC	RIBC1	0.975	1
HIST1H2BC	TTPAL	0.975	1
HIST1H2BC	ZBTB7C	0.975	1
HIST1H2BC	ZNF362	0.975	1
HIST1H3B	Amp_11q14.1	0.975	1
HLA-DRB5	KRAS	0.975	1
HLA-DRB5	ICOSLG	0.975	1
HLA-DRB5	MLC1	0.975	1
HLA-DRB5	OR6C76	0.975	1
HLA-DRB5	CABYR	0.975	1
HLA-DRB5	CCDC82	0.975	1
HLA-DRB5	CEP57	0.975	1
HLA-DRB5	CXCR3	0.975	1
HLA-DRB5	RHOA	0.975	1
HLA-DRB5	TARBP2	0.975	1
HLA-DRB5	TCP11	0.975	1
KRAS	RAB42	0.975	1
KRAS	CCL13	0.975	1
KRAS	OR2T35	0.975	1
KRAS	XBP1	0.975	1
KRAS	OXCT2	0.975	1
KRAS	PAX2	0.975	1
KRAS	RHBG	0.975	1
KRAS	TTPAL	0.975	1
KRAS	ZBTB7C	0.975	1
KRAS	ZNF362	0.975	1
PTEN	Del_9p21.3	0.975	1
PTHLH	Del_10q26.3	0.975	1
PTPN22	Del_20p13	0.975	1
RAB42	ICOSLG	0.975	1
RAB42	MLC1	0.975	1
RAB42	OR6C76	0.975	1
RAB42	CABYR	0.975	1
RAB42	CCDC82	0.975	1
RAB42	CEP57	0.975	1
RAB42	CXCR3	0.975	1
RAB42	RHOA	0.975	1
RAB42	TARBP2	0.975	1
RAB42	TCP11	0.975	1
SF3B1	16p-Amp	0.975	1
SF3B1	Amp_1q44	0.975	1
SMAD2	16p-Del	0.975	1
SMAD2	9p-Del	0.975	1
TBL1XR1	22q-Del	0.975	1
TCP10	HRNR	0.975	1
TCP10	SPRR2B	0.975	1
TCP10	SDC1	0.975	1
TP53	Amp_4q13.3	0.975	1
VCPIP1	Del_12p13.1	0.975	1
ZFP36L1	Del_17p12	0.975	1
ZFP36L2	16p-Del	0.975	1
ABCA8	Del_14q24.1	0.975	1
CCL13	ICOSLG	0.975	1
CCL13	MLC1	0.975	1
CCL13	OR6C76	0.975	1
CCL13	CABYR	0.975	1
CCL13	CCDC82	0.975	1
CCL13	CEP57	0.975	1
CCL13	CXCR3	0.975	1
CCL13	RHOA	0.975	1
CCL13	TARBP2	0.975	1
CCL13	TCP11	0.975	1
CCNL2	Del_10q26.3	0.975	1
DLX6	Amp_14q21.1	0.975	1
DST	Del_17p12	0.975	1
FXYD5	1p-Del	0.975	1
GRHL2	SPRR2B	0.975	1
GRHL2	SDC1	0.975	1
GYG2	HRNR	0.975	1
GYG2	SPRR2B	0.975	1
GYG2	SDC1	0.975	1
HRNR	PSIP1	0.975	1
HRNR	TPP2	0.975	1
ICOSLG	OR2T35	0.975	1
ICOSLG	XBP1	0.975	1
ICOSLG	OXCT2	0.975	1
ICOSLG	PAX2	0.975	1
ICOSLG	RHBG	0.975	1
ICOSLG	RIBC1	0.975	1
ICOSLG	TTPAL	0.975	1
ICOSLG	ZBTB7C	0.975	1
ICOSLG	ZNF362	0.975	1
ICOSLG	Amp_8p11.23	0.975	1
ICOSLG	Amp_19p13.12	0.975	1
ICOSLG	Del_11p15.5	0.975	1
MLC1	OR2T35	0.975	1
MLC1	XBP1	0.975	1
MLC1	OXCT2	0.975	1
MLC1	PAX2	0.975	1
MLC1	RHBG	0.975	1
MLC1	RIBC1	0.975	1
MLC1	TTPAL	0.975	1
MLC1	ZBTB7C	0.975	1
MLC1	ZNF362	0.975	1
MLC1	Del_11p15.5	0.975	1
MORN1	SPRR2B	0.975	1
MORN1	SDC1	0.975	1
NFE2L3	Amp_11q13.3	0.975	1
OR2T35	OR6C76	0.975	1
OR2T35	CABYR	0.975	1
OR2T35	CCDC82	0.975	1
OR2T35	CEP57	0.975	1
OR2T35	CXCR3	0.975	1
OR2T35	RHOA	0.975	1
OR2T35	TCP11	0.975	1
OR2T35	Del_20p13	0.975	1
OR4D10	16p-Del	0.975	1
OR6C76	XBP1	0.975	1
OR6C76	OXCT2	0.975	1
OR6C76	PAX2	0.975	1
OR6C76	RIBC1	0.975	1
OR6C76	TTPAL	0.975	1
OR6C76	ZBTB7C	0.975	1
OR6C76	ZNF362	0.975	1
SPRR2B	C15orf39	0.975	1
SPRR2B	PSIP1	0.975	1
SPRR2B	SLC35B2	0.975	1
SPRR2B	USP36	0.975	1
XBP1	CABYR	0.975	1
XBP1	CCDC82	0.975	1
XBP1	CEP57	0.975	1
XBP1	CXCR3	0.975	1
XBP1	RHOA	0.975	1
XBP1	TARBP2	0.975	1
XBP1	TCP11	0.975	1
AKT2	11q-Del	0.975	1
AKT2	1p-Del	0.975	1
AKT2	Amp_14q21.1	0.975	1
ATHL1	15q-Del	0.975	1
ATHL1	Del_20p13	0.975	1
BCORL1	Del_14q24.1	0.975	1
C15orf39	SDC1	0.975	1
CABYR	OXCT2	0.975	1
CABYR	PAX2	0.975	1
CABYR	RHBG	0.975	1
CABYR	RIBC1	0.975	1
CABYR	TTPAL	0.975	1
CABYR	ZBTB7C	0.975	1
CABYR	ZNF362	0.975	1
CCDC82	OXCT2	0.975	1
CCDC82	PAX2	0.975	1
CCDC82	RHBG	0.975	1
CCDC82	RIBC1	0.975	1
CCDC82	TTPAL	0.975	1
CCDC82	ZBTB7C	0.975	1
CCDC82	ZNF362	0.975	1
CEP57	OXCT2	0.975	1
CEP57	PAX2	0.975	1
CEP57	RHBG	0.975	1
CEP57	RIBC1	0.975	1
CEP57	TTPAL	0.975	1
CEP57	ZBTB7C	0.975	1
CEP57	ZNF362	0.975	1
CXCR3	OXCT2	0.975	1
CXCR3	PAX2	0.975	1
CXCR3	RHBG	0.975	1
CXCR3	RIBC1	0.975	1
CXCR3	ZBTB7C	0.975	1
CXCR3	ZNF362	0.975	1
KDM6A	Amp_1q44	0.975	1
MR1	16p-Del	0.975	1
NBPF9	Amp_14q21.1	0.975	1
OXCT2	RHOA	0.975	1
OXCT2	TARBP2	0.975	1
OXCT2	TCP11	0.975	1
OXCT2	9q-Del	0.975	1
PAX2	RHOA	0.975	1
PAX2	TARBP2	0.975	1
PAX2	TCP11	0.975	1
PAX2	9q-Del	0.975	1
PAX2	Del_20p13	0.975	1
PSIP1	SDC1	0.975	1
RHBG	RHOA	0.975	1
RHBG	TARBP2	0.975	1
RHBG	TCP11	0.975	1
RHBG	Del_20p13	0.975	1
RHOA	RIBC1	0.975	1
RHOA	TTPAL	0.975	1
RHOA	ZBTB7C	0.975	1
RHOA	ZNF362	0.975	1
RIBC1	TARBP2	0.975	1
RIBC1	TCP11	0.975	1
RIBC1	Del_20p13	0.975	1
SDC1	SLC35B2	0.975	1
SDC1	TPP2	0.975	1
SDC1	USP36	0.975	1
TARBP2	ZBTB7C	0.975	1
TARBP2	ZNF362	0.975	1
TCP11	TTPAL	0.975	1
TCP11	ZBTB7C	0.975	1
TCP11	ZNF362	0.975	1
TNRC6B	Amp_1p22.3	0.975	1
ZBTB7C	Del_20p13	0.975	1
ZNF362	Del_20p13	0.975	1
ZNF687	Amp_11q14.1	0.975	1
13q-Del	Amp_1q21.3	0.975	1
15q-Del	1q-Del	0.975	1
16p-Del	Amp_10p15.1	0.975	1
16p-Del	Del_19q13.32	0.975	1
17q-Del	6q-Del	0.975	1
17q-Del	Amp_15q26.3	0.975	1
1q-Del	Del_20p13	0.975	1
6q-Del	Amp_6p23	0.975	1
9p-Del	Amp_3p25.1	0.975	1
Amp_10p15.1	Del_3p21.31	0.975	1
Amp_12p13.33	Del_9q21.11	0.975	1
Amp_17q12	Del_7p22.3	0.975	1
Del_9p21.3	Del_12q24.31	0.975	1
AARS	TBX3	0.976	1
APC	MAP3K1	0.976	1
APC	ABCA8	0.976	1
APC	BCORL1	0.976	1
APC	17q-Amp	0.976	1
ARID1A	COL6A5	0.976	1
C1QTNF5	4p-Del	0.976	1
CASP8	DOCK11	0.976	1
CASP8	16q-Del	0.976	1
CBFB	TBX3	0.976	1
ERBB2	FRMPD2	0.976	1
ERBB2	TGS1	0.976	1
FBXW7	MYH9	0.976	1
FBXW7	WDR52	0.976	1
FBXW7	KDM6A	0.976	1
FBXW7	Del_6p25.3	0.976	1
GATA3	SPEN	0.976	1
GATA3	Amp_14q21.1	0.976	1
GPS2	17p-Del	0.976	1
MAP3K1	MYH9	0.976	1
MAP3K1	KDM6A	0.976	1
NCOR1	SF3B1	0.976	1
NCOR1	MYH9	0.976	1
NCOR1	KDM6A	0.976	1
PIK3R1	WDR52	0.976	1
PIWIL1	MED23	0.976	1
PIWIL1	MUC6	0.976	1
PIWIL1	ZMYM3	0.976	1
PTEN	SMAD2	0.976	1
PTEN	ZFP36L2	0.976	1
PTEN	ANKRD20A4	0.976	1
PTEN	MR1	0.976	1
PTPN22	COL6A5	0.976	1
PTPN22	Amp_17q23.1	0.976	1
RPGR	MED23	0.976	1
RPGR	MUC6	0.976	1
RPGR	RBMX	0.976	1
SF3B1	ABCA8	0.976	1
SF3B1	17q-Amp	0.976	1
SMAD2	18p-Del	0.976	1
SMAD4	18p-Del	0.976	1
SMAD4	Amp_8q24.21	0.976	1
TBX3	VCPIP1	0.976	1
THEM5	17p-Del	0.976	1
TP53	Amp_15q26.3	0.976	1
TP53	Del_9p23	0.976	1
ABCA8	Amp_11q13.3	0.976	1
ANKRD12	RBMX	0.976	1
ANKRD12	ZMYM3	0.976	1
ATXN7L1	Amp_8q24.21	0.976	1
CCNL2	18p-Del	0.976	1
COL6A5	PRICKLE3	0.976	1
COL6A5	ATHL1	0.976	1
COL6A5	14q-Del	0.976	1
COL6A5	1q-Del	0.976	1
COL6A5	Del_9p23	0.976	1
ERBB3	MUC6	0.976	1
ERBB3	ZMYM3	0.976	1
FXYD5	Del_12q23.1	0.976	1
GPRIN2	17p-Del	0.976	1
MYH9	BCORL1	0.976	1
PRICKLE3	Del_19p13.3	0.976	1
SHISA4	Del_12q23.1	0.976	1
SHISA4	Del_12q24.31	0.976	1
WDR52	BCORL1	0.976	1
AKT2	Del_12q24.31	0.976	1
BCORL1	KDM6A	0.976	1
BCORL1	Amp_19p13.12	0.976	1
C15orf39	Del_6q27	0.976	1
DOCK11	TGS1	0.976	1
FGFR2	17p-Del	0.976	1
MUC6	TNRC6B	0.976	1
TGS1	16q-Del	0.976	1
20p-Amp	Del_11p15.5	0.976	1
7p-Amp	Del_9q34.2	0.976	1
8p-Amp	6q-Del	0.976	1
8p-Amp	Del_19p13.3	0.976	1
13q-Del	Del_12q24.31	0.976	1
16q-Del	Del_2q37.3	0.976	1
18p-Del	Amp_20q13.2	0.976	1
18p-Del	Del_6p25.3	0.976	1
6q-Del	Del_15q13.1	0.976	1
9q-Del	Amp_20q13.2	0.976	1
9q-Del	Del_16q24.3	0.976	1
Amp_6p23	Del_1p36.13	0.976	1
Amp_8p11.23	Amp_11p13	0.976	1
Amp_12q15	Del_11p15.5	0.976	1
Amp_15q26.3	Del_4p16.3	0.976	1
Del_5q11.2	Del_6q27	0.976	1
AARS	NF1	0.977	1
ACTL6B	Del_11p15.5	0.977	1
ARID1A	VCPIP1	0.977	1
ARID1A	NFE2L3	0.977	1
ARID1A	EIF4A2	0.977	1
ASB10	8q-Amp	0.977	1
C1QTNF5	18q-Del	0.977	1
CDH1	FGFR2	0.977	1
GATA3	Del_16q24.3	0.977	1
HIST1H2BC	Amp_10q22.3	0.977	1
MAP2K4	DST	0.977	1
MAP3K1	NFE2L3	0.977	1
MAP3K1	EIF4A2	0.977	1
PTHLH	DST	0.977	1
PTHLH	Amp_1q44	0.977	1
SMAD2	18q-Del	0.977	1
SMAD4	8p-Amp	0.977	1
SMAD4	Amp_1q44	0.977	1
TAF1L	Del_20p13	0.977	1
TCP10	7q-Amp	0.977	1
VCPIP1	NF1	0.977	1
VCPIP1	Amp_12p13.33	0.977	1
WSCD2	AKD1	0.977	1
AKD1	MLL4	0.977	1
AKD1	Amp_15q26.3	0.977	1
CCNL2	Amp_1q44	0.977	1
GRHL2	SPEN	0.977	1
HLA-C	NF1	0.977	1
MORN1	SPEN	0.977	1
NFE2L3	NF1	0.977	1
OR2T35	22q-Del	0.977	1
OR4D10	Amp_1q44	0.977	1
PPEF1	5q-Del	0.977	1
PPEF1	Del_5q11.2	0.977	1
PRICKLE3	Del_8p23.2	0.977	1
PRICKLE3	Del_14q24.1	0.977	1
SPRR2B	20p-Amp	0.977	1
C15orf39	Del_8p23.2	0.977	1
CEP57	Amp_10q22.3	0.977	1
EIF4A2	NF1	0.977	1
KCNN3	Amp_12p13.33	0.977	1
OXCT2	22q-Del	0.977	1
PAX2	22q-Del	0.977	1
PSIP1	SPEN	0.977	1
SDC1	20p-Amp	0.977	1
SPEN	TPP2	0.977	1
SPEN	USP36	0.977	1
TNRC6B	16q-Del	0.977	1
ZNF362	22q-Del	0.977	1
ZNF687	5q-Del	0.977	1
7p-Amp	16p-Del	0.977	1
8q-Amp	15q-Del	0.977	1
8q-Amp	Del_6q15	0.977	1
11q-Del	Amp_1q44	0.977	1
17p-Del	Amp_8q24.21	0.977	1
18q-Del	Amp_1p22.3	0.977	1
5q-Del	8p-Del	0.977	1
8p-Del	9q-Del	0.977	1
8p-Del	Amp_15q26.3	0.977	1
Amp_1q44	Amp_10p15.1	0.977	1
AQP12A	Del_15q13.1	0.978	1
ARID1A	FOXA1	0.978	1
ARID1A	Amp_17q12	0.978	1
ASB10	Del_2q37.3	0.978	1
C1QTNF5	SDC1	0.978	1
CBFB	CDKN1B	0.978	1
CDH1	DST	0.978	1
CDH1	Amp_1q21.3	0.978	1
EPDR1	16q-Del	0.978	1
ERBB2	SPEN	0.978	1
FAM20C	Amp_17q23.1	0.978	1
FAM86B1	Del_2q37.3	0.978	1
FOXA1	PTPN22	0.978	1
FOXA1	TBL1XR1	0.978	1
FOXA1	ATHL1	0.978	1
FOXA1	NF1	0.978	1
GATA3	9q-Del	0.978	1
HIST1H3B	PCNXL2	0.978	1
KRAS	NCOR1	0.978	1
MLL3	Del_16q24.3	0.978	1
NCOR1	OR6C76	0.978	1
NCOR1	CCDC82	0.978	1
NCOR1	CEP57	0.978	1
NCOR1	TARBP2	0.978	1
PIK3CA	TNRC6B	0.978	1
PTHLH	SPRR2B	0.978	1
PTHLH	SDC1	0.978	1
RB1	FHOD3	0.978	1
RB1	5q-Del	0.978	1
SMAD2	SDC1	0.978	1
SMAD4	SPRR2B	0.978	1
SMAD4	SDC1	0.978	1
SMAD4	6q-Del	0.978	1
TP53	AKD1	0.978	1
VCPIP1	Amp_19q12	0.978	1
ZFP36L2	SPRR2B	0.978	1
ZFP36L2	SDC1	0.978	1
ABCA8	Del_12p13.1	0.978	1
AKD1	Del_18q23	0.978	1
ATXN7L1	SPRR2B	0.978	1
ATXN7L1	SDC1	0.978	1
CCNL2	SPRR2B	0.978	1
CCNL2	SDC1	0.978	1
CCNL2	6q-Del	0.978	1
FXYD5	16q-Del	0.978	1
GPRIN2	PCNXL2	0.978	1
NFE2L3	Del_21q11.2	0.978	1
OR4D10	SDC1	0.978	1
OR6C76	17q-Amp	0.978	1
SPRR2B	ANKRD20A4	0.978	1
SPRR2B	TFE3	0.978	1
XBP1	Amp_17q23.1	0.978	1
ZNF41	PCNXL2	0.978	1
ZNF41	13q-Del	0.978	1
ANKRD20A4	SDC1	0.978	1
BCORL1	Del_12p13.1	0.978	1
C15orf39	Del_1p36.13	0.978	1
CABYR	17q-Amp	0.978	1
CCDC82	Del_4q35.1	0.978	1
CEP57	Amp_4q13.3	0.978	1
CXCR3	Amp_4q13.3	0.978	1
DLG1	22q-Del	0.978	1
DOCK11	SPEN	0.978	1
FGFR2	PCNXL2	0.978	1
FGFR2	13q-Del	0.978	1
FRMPD2	8p-Amp	0.978	1
IRS4	PCNXL2	0.978	1
KCNN3	14q-Del	0.978	1
KDM6A	1q-Amp	0.978	1
MKL1	16q-Del	0.978	1
MR1	SDC1	0.978	1
NBPF9	16q-Del	0.978	1
PAX2	Amp_15q26.3	0.978	1
PAX2	Amp_17q23.1	0.978	1
PCNXL2	ZNF687	0.978	1
RHBG	Amp_15q26.3	0.978	1
RHBG	Amp_17q23.1	0.978	1
RHOA	Amp_4q13.3	0.978	1
RHOA	Del_4q35.1	0.978	1
SDC1	TFE3	0.978	1
TGS1	18q-Del	0.978	1
TPP2	Del_2q37.3	0.978	1
TTPAL	Amp_15q26.3	0.978	1
16p-Amp	Amp_4q13.3	0.978	1
5p-Amp	Amp_3q26.32	0.978	1
11p-Del	Amp_10p15.1	0.978	1
14q-Del	8p-Del	0.978	1
18p-Del	8p-Del	0.978	1
18p-Del	Amp_3p25.1	0.978	1
8p-Del	Amp_17q12	0.978	1
9q-Del	Amp_6p23	0.978	1
9q-Del	Amp_17q23.1	0.978	1
Amp_3q26.32	Amp_19q13.42	0.978	1
Amp_6q21	Amp_14q21.1	0.978	1
Amp_10q22.3	Del_5q21.3	0.978	1
Amp_11p13	Del_6p25.3	0.978	1
Amp_11p13	Del_6q15	0.978	1
Amp_12q15	Amp_14q21.1	0.978	1
Amp_13q34	Del_9q34.2	0.978	1
Amp_14q21.1	Amp_19q13.42	0.978	1
Amp_17q12	Del_6q27	0.978	1
Amp_17q23.1	Del_10q26.3	0.978	1
Del_7p22.3	Del_12q23.1	0.978	1
Del_7q36.1	Del_17q21.31	0.978	1
ACTL6B	Amp_15q26.3	0.979	1
APC	MLL3	0.979	1
APC	MED23	0.979	1
APC	MUC6	0.979	1
EPDR1	FAM20C	0.979	1
EPDR1	HLA-DRB5	0.979	1
EPDR1	RAB42	0.979	1
EPDR1	CCL13	0.979	1
EPDR1	OR2T35	0.979	1
EPDR1	XBP1	0.979	1
EPDR1	OXCT2	0.979	1
EPDR1	PAX2	0.979	1
EPDR1	RHBG	0.979	1
EPDR1	RIBC1	0.979	1
EPDR1	ZBTB7C	0.979	1
EPDR1	ZNF362	0.979	1
FAM20C	DLX6	0.979	1
FAM20C	FBXO17	0.979	1
FAM20C	FXYD5	0.979	1
FAM20C	SHISA4	0.979	1
FAM20C	AKT2	0.979	1
FAM20C	CDC42EP1	0.979	1
FAM20C	MKL1	0.979	1
FAM20C	NBPF9	0.979	1
GPS2	Del_17p12	0.979	1
HIST1H3B	Amp_3q26.32	0.979	1
HIST1H3B	Amp_6q21	0.979	1
HIST1H3B	Del_17p12	0.979	1
HLA-DRB5	DLX6	0.979	1
HLA-DRB5	FBXO17	0.979	1
HLA-DRB5	FXYD5	0.979	1
HLA-DRB5	AKT2	0.979	1
HLA-DRB5	CDC42EP1	0.979	1
HLA-DRB5	MKL1	0.979	1
HLA-DRB5	NBPF9	0.979	1
KRAS	16p-Amp	0.979	1
MLL3	DNAH12	0.979	1
NCOR1	TBX3	0.979	1
PIK3R1	Del_4q35.1	0.979	1
PIK3R1	Del_15q13.1	0.979	1
PIWIL1	PTEN	0.979	1
PTEN	RPGR	0.979	1
PTEN	ANKRD12	0.979	1
PTEN	SPEN	0.979	1
RAB42	DLX6	0.979	1
RAB42	FBXO17	0.979	1
RAB42	FXYD5	0.979	1
RAB42	SHISA4	0.979	1
RAB42	AKT2	0.979	1
RAB42	CDC42EP1	0.979	1
RAB42	MKL1	0.979	1
RAB42	NBPF9	0.979	1
RUNX1	TPP2	0.979	1
SF3B1	ATXN2	0.979	1
SF3B1	MUC6	0.979	1
SF3B1	RBMX	0.979	1
TAF1L	Del_10q26.3	0.979	1
THEM5	Amp_6q21	0.979	1
THEM5	Del_17p12	0.979	1
VCPIP1	Del_18q23	0.979	1
AKD1	Del_17q21.31	0.979	1
ATXN2	DNAH12	0.979	1
CCL13	DLX6	0.979	1
CCL13	FBXO17	0.979	1
CCL13	FXYD5	0.979	1
CCL13	SHISA4	0.979	1
CCL13	AKT2	0.979	1
CCL13	CDC42EP1	0.979	1
CCL13	MKL1	0.979	1
CCL13	NBPF9	0.979	1
COL6A5	Del_7p22.3	0.979	1
DLX6	OR2T35	0.979	1
DLX6	XBP1	0.979	1
DLX6	OXCT2	0.979	1
DLX6	PAX2	0.979	1
DLX6	RHBG	0.979	1
DLX6	RIBC1	0.979	1
DLX6	TTPAL	0.979	1
DLX6	ZBTB7C	0.979	1
DLX6	ZNF362	0.979	1
DNAH12	RBMX	0.979	1
DNAH12	ZMYM3	0.979	1
FBXO17	OR2T35	0.979	1
FBXO17	OXCT2	0.979	1
FBXO17	PAX2	0.979	1
FBXO17	TTPAL	0.979	1
FBXO17	ZBTB7C	0.979	1
FBXO17	ZNF362	0.979	1
FXYD5	OR2T35	0.979	1
FXYD5	XBP1	0.979	1
FXYD5	OXCT2	0.979	1
FXYD5	PAX2	0.979	1
FXYD5	RHBG	0.979	1
FXYD5	RIBC1	0.979	1
FXYD5	TTPAL	0.979	1
FXYD5	ZBTB7C	0.979	1
FXYD5	ZNF362	0.979	1
GPRIN2	5p-Amp	0.979	1
GPRIN2	Del_17p12	0.979	1
ICOSLG	16p-Amp	0.979	1
MORN1	11p-Del	0.979	1
MYH9	ZMYM3	0.979	1
OR2T35	SHISA4	0.979	1
OR2T35	AKT2	0.979	1
OR2T35	CDC42EP1	0.979	1
OR2T35	MKL1	0.979	1
OR2T35	NBPF9	0.979	1
PPEF1	Del_6q15	0.979	1
SHISA4	XBP1	0.979	1
SHISA4	OXCT2	0.979	1
SHISA4	PAX2	0.979	1
SHISA4	RHBG	0.979	1
SHISA4	TTPAL	0.979	1
SHISA4	ZBTB7C	0.979	1
SHISA4	ZNF362	0.979	1
WDR52	MUC6	0.979	1
WDR52	RBMX	0.979	1
XBP1	AKT2	0.979	1
XBP1	CDC42EP1	0.979	1
XBP1	MKL1	0.979	1
XBP1	NBPF9	0.979	1
ZNF41	5p-Amp	0.979	1
ZNF41	Del_17p12	0.979	1
AKT2	OXCT2	0.979	1
AKT2	PAX2	0.979	1
AKT2	RHBG	0.979	1
AKT2	TTPAL	0.979	1
AKT2	ZBTB7C	0.979	1
AKT2	ZNF362	0.979	1
ATHL1	Amp_15q26.3	0.979	1
CDC42EP1	OXCT2	0.979	1
CDC42EP1	PAX2	0.979	1
CDC42EP1	RHBG	0.979	1
CDC42EP1	RIBC1	0.979	1
CDC42EP1	ZBTB7C	0.979	1
CDC42EP1	ZNF362	0.979	1
EIF4A2	Del_18q23	0.979	1
FGFR2	Amp_11p13	0.979	1
FRMPD2	Amp_8q24.21	0.979	1
IRS4	Amp_3q26.32	0.979	1
IRS4	Amp_6q21	0.979	1
KDM6A	MUC6	0.979	1
MKL1	OXCT2	0.979	1
MKL1	PAX2	0.979	1
MKL1	RHBG	0.979	1
MKL1	RIBC1	0.979	1
MKL1	TTPAL	0.979	1
MKL1	ZBTB7C	0.979	1
MKL1	ZNF362	0.979	1
NBPF9	OXCT2	0.979	1
NBPF9	PAX2	0.979	1
NBPF9	RHBG	0.979	1
NBPF9	RIBC1	0.979	1
NBPF9	TTPAL	0.979	1
NBPF9	ZBTB7C	0.979	1
NBPF9	ZNF362	0.979	1
SLC35B2	11p-Del	0.979	1
TARBP2	16p-Amp	0.979	1
TGS1	Del_12q24.31	0.979	1
8p-Amp	Del_13q14.2	0.979	1
16p-Del	Amp_3p25.1	0.979	1
16q-Del	18p-Del	0.979	1
1q-Del	Amp_15q26.3	0.979	1
6q-Del	Amp_1p22.3	0.979	1
Amp_13q34	Del_13q14.2	0.979	1
ACTL6B	Del_4q35.1	0.98	1
AQP12A	Amp_11q14.1	0.98	1
AQP12A	Del_8p23.2	0.98	1
ARID1A	1q-Amp	0.98	1
ARID1A	Amp_10q22.3	0.98	1
CTCF	WSCD2	0.98	1
ERBB2	FGFR2	0.98	1
ERBB2	IRS4	0.98	1
FBXW7	NCOR1	0.98	1
MAP2K4	SMAD2	0.98	1
MAP2K4	ZFP36L2	0.98	1
MAP2K4	CCNL2	0.98	1
MAP2K4	TFE3	0.98	1
MLL3	VCPIP1	0.98	1
MLL3	HLA-C	0.98	1
MLL3	EIF4A2	0.98	1
NCOR1	ABCA8	0.98	1
PIK3R1	4q-Del	0.98	1
PIWIL1	WSCD2	0.98	1
PIWIL1	DLG1	0.98	1
RPGR	DLG1	0.98	1
TAF1L	CASZ1	0.98	1
THEM5	Amp_8p11.23	0.98	1
TP53	20q-Amp	0.98	1
VCPIP1	Amp_20q13.2	0.98	1
ABCA8	4q-Del	0.98	1
AKD1	FHOD3	0.98	1
AKD1	UBC	0.98	1
AKD1	FRMPD2	0.98	1
CCNL2	16q-Del	0.98	1
DLX6	Del_19q13.32	0.98	1
DST	TNRC6B	0.98	1
ERBB3	CASZ1	0.98	1
ERBB3	4p-Del	0.98	1
GPRIN2	Amp_10p15.1	0.98	1
MORN1	Del_3p21.31	0.98	1
PPEF1	DOCK11	0.98	1
UBC	Amp_1q44	0.98	1
C15orf39	Del_3p21.31	0.98	1
C15orf39	Del_9p21.3	0.98	1
CEP57	20q-Amp	0.98	1
DOCK11	FGFR2	0.98	1
DOCK11	IRS4	0.98	1
DOCK11	ZNF687	0.98	1
DOCK11	Del_3p21.31	0.98	1
DOCK11	Del_4q35.1	0.98	1
EIF4A2	Amp_20q13.2	0.98	1
MKL1	Del_19q13.32	0.98	1
MLL4	TNRC6B	0.98	1
MR1	20p-Amp	0.98	1
NBPF9	7p-Amp	0.98	1
PCNXL2	Del_12q24.31	0.98	1
RBMX	Del_19p13.3	0.98	1
RHOA	Amp_11q14.1	0.98	1
TARBP2	20q-Amp	0.98	1
TARBP2	Amp_11q14.1	0.98	1
TGS1	Amp_8p11.21	0.98	1
17q-Amp	Del_13q14.2	0.98	1
7q-Amp	8p-Amp	0.98	1
8q-Amp	Del_6q27	0.98	1
13q-Del	Del_7q36.1	0.98	1
17q-Del	Amp_10q22.3	0.98	1
1q-Del	Del_15q13.1	0.98	1
Amp_1q21.3	Amp_3p25.1	0.98	1
Amp_3p25.1	Del_17p12	0.98	1
Amp_10q22.3	Amp_19q12	0.98	1
Amp_11q14.1	Del_2q37.3	0.98	1
Amp_12q15	Del_9q21.11	0.98	1
Amp_12q15	Del_11q23.3	0.98	1
Amp_19q12	Del_2q37.3	0.98	1
Amp_19q12	Del_21q11.2	0.98	1
Amp_20q13.2	Del_10q23.31	0.98	1
Amp_20q13.2	Del_15q13.1	0.98	1
Del_4q35.1	Del_16q24.3	0.98	1
Del_5q11.2	Del_22q13.32	0.98	1
Del_6q15	Del_21q11.2	0.98	1
AARS	COL6A5	0.981	1
AQP12A	SDC1	0.981	1
ASB10	TBX3	0.981	1
CDH1	MLC1	0.981	1
CDH1	OR6C76	0.981	1
CDH1	CEP57	0.981	1
CDH1	RHOA	0.981	1
FBXW7	ATXN2	0.981	1
FBXW7	RBMX	0.981	1
FBXW7	Amp_12p13.33	0.981	1
HIST1H2BC	SPRR2B	0.981	1
HIST1H2BC	SDC1	0.981	1
KRAS	SDC1	0.981	1
KRAS	16p-Del	0.981	1
PIK3CA	16p-Amp	0.981	1
PIK3R1	ATXN2	0.981	1
PIK3R1	RBMX	0.981	1
SF3B1	16p-Del	0.981	1
SMAD2	HRNR	0.981	1
SMAD4	Amp_17q12	0.981	1
TBX3	GRHL2	0.981	1
TBX3	PCNXL2	0.981	1
TBX3	PSIP1	0.981	1
TBX3	SLC35B2	0.981	1
TBX3	TPP2	0.981	1
TBX3	Amp_1q44	0.981	1
TCP10	Del_13q14.2	0.981	1
ABCA8	RBMX	0.981	1
ABCA8	ZMYM3	0.981	1
ABCA8	16p-Amp	0.981	1
ATXN2	BCORL1	0.981	1
ATXN7L1	Del_5q21.3	0.981	1
COL6A5	HLA-C	0.981	1
COL6A5	NFE2L3	0.981	1
COL6A5	EIF4A2	0.981	1
COL6A5	KCNN3	0.981	1
DST	Amp_1p22.3	0.981	1
GRHL2	Del_6p25.3	0.981	1
HRNR	OR4D10	0.981	1
HRNR	MR1	0.981	1
HRNR	TFE3	0.981	1
ICOSLG	SPRR2B	0.981	1
ICOSLG	SDC1	0.981	1
ICOSLG	Del_5q11.2	0.981	1
MLC1	SPRR2B	0.981	1
MLC1	SDC1	0.981	1
MLC1	16p-Del	0.981	1
MLC1	Del_1p22.1	0.981	1
MORN1	11q-Del	0.981	1
MYH9	Amp_1p22.3	0.981	1
OR6C76	SPRR2B	0.981	1
OR6C76	SDC1	0.981	1
SHISA4	Amp_3p25.1	0.981	1
SHISA4	Del_7p22.3	0.981	1
SPRR2B	CABYR	0.981	1
SPRR2B	CCDC82	0.981	1
SPRR2B	CEP57	0.981	1
SPRR2B	CXCR3	0.981	1
SPRR2B	RHOA	0.981	1
SPRR2B	TARBP2	0.981	1
SPRR2B	TCP11	0.981	1
ZNF41	Amp_13q34	0.981	1
AKT2	Del_7p22.3	0.981	1
BCORL1	ZMYM3	0.981	1
CABYR	SDC1	0.981	1
CCDC82	SDC1	0.981	1
CEP57	SDC1	0.981	1
CEP57	16p-Del	0.981	1
CXCR3	SDC1	0.981	1
DLG1	Amp_3p25.1	0.981	1
FGFR2	1q-Amp	0.981	1
KCNN3	8p-Del	0.981	1
OXCT2	5q-Del	0.981	1
RHOA	Del_4p16.3	0.981	1
SDC1	TARBP2	0.981	1
SDC1	TCP11	0.981	1
TARBP2	Del_5q11.2	0.981	1
USP36	11q-Del	0.981	1
16p-Amp	Amp_6p23	0.981	1
20q-Amp	Del_11p15.5	0.981	1
7p-Amp	Amp_15q26.3	0.981	1
8q-Amp	Del_1p36.13	0.981	1
13q-Del	Amp_3p25.1	0.981	1
18q-Del	Amp_14q21.1	0.981	1
9q-Del	Amp_19p13.12	0.981	1
Amp_3q26.32	Del_6p25.3	0.981	1
Amp_4q13.3	Del_4p16.3	0.981	1
Amp_10p15.1	Del_8p23.2	0.981	1
Amp_11q14.1	Del_14q24.1	0.981	1
Amp_15q26.3	Del_17q21.31	0.981	1
Amp_19q13.42	Del_17q21.31	0.981	1
Del_5q11.2	Del_12p13.1	0.981	1
AARS	FOXA1	0.982	1
ACTL6B	16p-Amp	0.982	1
ACTL6B	5q-Del	0.982	1
AQP12A	PTEN	0.982	1
ARID1A	PSIP1	0.982	1
ARID1A	SLC35B2	0.982	1
ARID1A	TPP2	0.982	1
ARID1A	Amp_11q14.1	0.982	1
CDKN1B	PCNXL2	0.982	1
FOXA1	MLL3	0.982	1
FOXA1	NFE2L3	0.982	1
FOXA1	EIF4A2	0.982	1
FOXA1	Amp_1q44	0.982	1
HIST1H2BC	PTEN	0.982	1
HIST1H3B	Del_10q26.3	0.982	1
HLA-DRB5	Amp_11p13	0.982	1
KRAS	PTEN	0.982	1
MAP3K1	MLL3	0.982	1
NCOR1	NF1	0.982	1
PTEN	SF3B1	0.982	1
PTEN	ICOSLG	0.982	1
PTEN	WDR52	0.982	1
PTEN	TARBP2	0.982	1
PTEN	11p-Del	0.982	1
PTEN	Del_10q26.3	0.982	1
PTHLH	SPEN	0.982	1
RB1	FGFR2	0.982	1
RPGR	6q-Del	0.982	1
SF3B1	CASZ1	0.982	1
SF3B1	MLL4	0.982	1
TCP10	NF1	0.982	1
THEM5	9p-Del	0.982	1
WSCD2	WDR52	0.982	1
ZFP36L1	15q-Del	0.982	1
ZFP36L2	SPEN	0.982	1
AKD1	5q-Del	0.982	1
CCL13	Del_16q24.3	0.982	1
COL6A5	Del_9p21.3	0.982	1
DNAH12	DLG1	0.982	1
FXYD5	Del_18q23	0.982	1
GYG2	NF1	0.982	1
GYG2	Del_12p13.1	0.982	1
ICOSLG	Amp_8p11.21	0.982	1
MORN1	NF1	0.982	1
MYH9	CASZ1	0.982	1
OR6C76	Amp_3q26.32	0.982	1
PRICKLE3	5q-Del	0.982	1
SHISA4	Del_17q21.31	0.982	1
UBC	20p-Amp	0.982	1
XBP1	5p-Amp	0.982	1
XBP1	Amp_6q21	0.982	1
XBP1	Amp_11p13	0.982	1
ZNF41	Del_10q26.3	0.982	1
ANGPT4	PCNXL2	0.982	1
ATHL1	PCNXL2	0.982	1
BCORL1	17q-Del	0.982	1
BCORL1	Del_1p36.13	0.982	1
C15orf39	NF1	0.982	1
CASZ1	KDM6A	0.982	1
KCNN3	15q-Del	0.982	1
NF1	PSIP1	0.982	1
NF1	TPP2	0.982	1
NF1	USP36	0.982	1
OXCT2	Amp_6q21	0.982	1
RBMX	Del_11p15.5	0.982	1
RHBG	Amp_19q13.42	0.982	1
RIBC1	Amp_11p13	0.982	1
RIBC1	Amp_19q13.42	0.982	1
RIBC1	Del_16q24.3	0.982	1
SPEN	TFE3	0.982	1
TCP11	Amp_8p11.21	0.982	1
TTPAL	Amp_11p13	0.982	1
TTPAL	Amp_19q13.42	0.982	1
ZBTB7C	Amp_11p13	0.982	1
ZNF362	5p-Amp	0.982	1
ZNF362	Amp_19q13.42	0.982	1
16p-Amp	22q-Del	0.982	1
20p-Amp	Amp_19q12	0.982	1
15q-Del	16q-Del	0.982	1
16q-Del	Del_17q21.31	0.982	1
1p-Del	6q-Del	0.982	1
1p-Del	Amp_8p11.21	0.982	1
6q-Del	Amp_20q13.2	0.982	1
8p-Del	Amp_3p25.1	0.982	1
Amp_8p11.23	Amp_11q14.1	0.982	1
Amp_10p15.1	Del_1p36.13	0.982	1
Amp_12p13.33	Del_10q23.31	0.982	1
Amp_13q34	Del_11p15.5	0.982	1
Amp_19p13.12	Del_13q14.2	0.982	1
Del_9p21.3	Del_21q11.2	0.982	1
APC	17p-Del	0.983	1
AQP12A	8p-Del	0.983	1
CASP8	RPGR	0.983	1
CASP8	TAF1L	0.983	1
CASP8	ANKRD12	0.983	1
CASP8	TNRC6B	0.983	1
FAM20C	HLA-DRB5	0.983	1
FAM20C	RAB42	0.983	1
FAM20C	CCL13	0.983	1
FAM20C	OR2T35	0.983	1
FAM20C	XBP1	0.983	1
FAM20C	OXCT2	0.983	1
FAM20C	PAX2	0.983	1
FAM20C	RHBG	0.983	1
FAM20C	RIBC1	0.983	1
FAM20C	TTPAL	0.983	1
FAM20C	ZBTB7C	0.983	1
FAM20C	ZNF362	0.983	1
FAM20C	Amp_13q34	0.983	1
GATA3	16q-Del	0.983	1
HIST1H3B	1p-Del	0.983	1
HLA-DRB5	RAB42	0.983	1
HLA-DRB5	CCL13	0.983	1
HLA-DRB5	OR2T35	0.983	1
HLA-DRB5	XBP1	0.983	1
HLA-DRB5	PAX2	0.983	1
HLA-DRB5	RHBG	0.983	1
HLA-DRB5	TTPAL	0.983	1
HLA-DRB5	ZBTB7C	0.983	1
HLA-DRB5	ZNF362	0.983	1
KRAS	DST	0.983	1
MAP2K4	TNRC6B	0.983	1
MLL3	Del_21q11.2	0.983	1
MYB	ANKRD12	0.983	1
MYB	Amp_1q21.3	0.983	1
PIK3CA	TBL1XR1	0.983	1
PIK3CA	GRHL2	0.983	1
PIK3CA	PCNXL2	0.983	1
PIWIL1	FRMPD2	0.983	1
PTPN22	DOCK11	0.983	1
RAB42	OR2T35	0.983	1
RAB42	XBP1	0.983	1
RAB42	OXCT2	0.983	1
RAB42	PAX2	0.983	1
RAB42	RHBG	0.983	1
RAB42	RIBC1	0.983	1
RAB42	TTPAL	0.983	1
RAB42	ZBTB7C	0.983	1
RAB42	ZNF362	0.983	1
RB1	Del_1p36.13	0.983	1
RPGR	FHOD3	0.983	1
RPGR	FRMPD2	0.983	1
RPGR	TGS1	0.983	1
TAF1L	FHOD3	0.983	1
TAF1L	UBC	0.983	1
TAF1L	TGS1	0.983	1
TCP10	Amp_8p11.23	0.983	1
AKD1	Amp_8p11.21	0.983	1
ANKRD12	UBC	0.983	1
ANKRD12	FRMPD2	0.983	1
CCL13	OR2T35	0.983	1
CCL13	XBP1	0.983	1
CCL13	OXCT2	0.983	1
CCL13	PAX2	0.983	1
CCL13	RHBG	0.983	1
CCL13	RIBC1	0.983	1
CCL13	TTPAL	0.983	1
CCL13	ZBTB7C	0.983	1
CCL13	ZNF362	0.983	1
DST	ICOSLG	0.983	1
DST	OR6C76	0.983	1
DST	CCDC82	0.983	1
DST	CEP57	0.983	1
DST	RHOA	0.983	1
DST	TARBP2	0.983	1
DST	TCP11	0.983	1
DST	Amp_15q26.3	0.983	1
DST	Del_2q37.3	0.983	1
ICOSLG	8p-Del	0.983	1
ICOSLG	Amp_1p22.3	0.983	1
MYH9	17p-Del	0.983	1
OR2T35	XBP1	0.983	1
OR2T35	OXCT2	0.983	1
OR2T35	PAX2	0.983	1
OR2T35	RHBG	0.983	1
OR2T35	RIBC1	0.983	1
OR2T35	TTPAL	0.983	1
OR2T35	ZBTB7C	0.983	1
OR2T35	ZNF362	0.983	1
OR6C76	Amp_1p22.3	0.983	1
PPEF1	Amp_14q21.1	0.983	1
PPEF1	Del_1p36.13	0.983	1
PPEF1	Del_16q24.3	0.983	1
PRICKLE3	DOCK11	0.983	1
PRICKLE3	Amp_11q14.1	0.983	1
SHISA4	Amp_19p13.12	0.983	1
XBP1	OXCT2	0.983	1
XBP1	PAX2	0.983	1
XBP1	RIBC1	0.983	1
XBP1	TTPAL	0.983	1
XBP1	ZBTB7C	0.983	1
XBP1	ZNF362	0.983	1
ATHL1	20q-Amp	0.983	1
BCORL1	Del_4p16.3	0.983	1
CABYR	Amp_20q13.2	0.983	1
DOCK11	Del_12q23.1	0.983	1
DOCK11	Del_12q24.31	0.983	1
MED23	Del_12p13.1	0.983	1
MKL1	Amp_19p13.12	0.983	1
MUC6	Del_12p13.1	0.983	1
NF1	PCNXL2	0.983	1
OXCT2	PAX2	0.983	1
OXCT2	RHBG	0.983	1
OXCT2	RIBC1	0.983	1
OXCT2	TTPAL	0.983	1
OXCT2	ZBTB7C	0.983	1
OXCT2	ZNF362	0.983	1
OXCT2	Amp_13q34	0.983	1
PAX2	RHBG	0.983	1
PAX2	RIBC1	0.983	1
PAX2	TTPAL	0.983	1
PAX2	ZBTB7C	0.983	1
PAX2	Amp_13q34	0.983	1
RBMX	Del_12p13.1	0.983	1
RHBG	RIBC1	0.983	1
RHBG	TTPAL	0.983	1
RHBG	ZBTB7C	0.983	1
RHBG	ZNF362	0.983	1
RHBG	Amp_17q12	0.983	1
RIBC1	TTPAL	0.983	1
RIBC1	ZBTB7C	0.983	1
RIBC1	ZNF362	0.983	1
SDC1	Del_6p25.3	0.983	1
TARBP2	Amp_10p15.1	0.983	1
TTPAL	ZBTB7C	0.983	1
TTPAL	ZNF362	0.983	1
ZBTB7C	ZNF362	0.983	1
17q-Amp	Amp_6p23	0.983	1
20p-Amp	8p-Del	0.983	1
20q-Amp	Amp_6p23	0.983	1
8p-Amp	Del_6q15	0.983	1
15q-Del	18q-Del	0.983	1
15q-Del	Amp_8q24.21	0.983	1
16p-Del	Amp_19p13.12	0.983	1
16p-Del	Del_6q27	0.983	1
16q-Del	Del_7q36.1	0.983	1
1p-Del	Amp_1q44	0.983	1
22q-Del	Amp_19p13.12	0.983	1
4p-Del	Amp_19p13.12	0.983	1
Amp_3p25.1	Amp_11q14.1	0.983	1
Amp_3p25.1	Amp_15q26.3	0.983	1
Amp_6q21	Amp_20q13.2	0.983	1
Amp_8q24.21	Del_6q15	0.983	1
Amp_8q24.21	Del_17q21.31	0.983	1
Amp_11p13	Del_4q35.1	0.983	1
Amp_19q13.42	Del_15q13.1	0.983	1
Del_2q37.3	Del_12q23.1	0.983	1
Del_2q37.3	Del_12q24.31	0.983	1
Del_6p25.3	Del_7p22.3	0.983	1
Del_6q15	Del_7p22.3	0.983	1
Del_6q27	Del_10q26.3	0.983	1
Del_9p23	Del_12q24.31	0.983	1
ACTL6B	Amp_11p13	0.984	1
ACTL6B	Amp_19q13.42	0.984	1
APC	FRMPD2	0.984	1
APC	TGS1	0.984	1
CASP8	SF3B1	0.984	1
CASP8	MYH9	0.984	1
CASP8	WDR52	0.984	1
EPDR1	SPRR2B	0.984	1
EPDR1	SDC1	0.984	1
ERBB2	TBX3	0.984	1
FAM86B1	Amp_12p13.33	0.984	1
FBXW7	MLL3	0.984	1
FBXW7	CASZ1	0.984	1
FBXW7	16p-Del	0.984	1
GATA3	KDM6A	0.984	1
HIST1H3B	AKD1	0.984	1
MAP3K1	USP36	0.984	1
MLL3	PIK3R1	0.984	1
MLL3	ABCA8	0.984	1
MYB	KDM6A	0.984	1
NCOR1	ZMYM3	0.984	1
PIK3CA	OR6C76	0.984	1
PIK3CA	UBC	0.984	1
PIK3R1	TP53	0.984	1
PIK3R1	CASZ1	0.984	1
PIK3R1	16p-Del	0.984	1
PTPN22	Amp_19q13.42	0.984	1
PTPN22	Del_4p16.3	0.984	1
RUNX1	SMAD2	0.984	1
RUNX1	SMAD4	0.984	1
RUNX1	CCNL2	0.984	1
RUNX1	1q-Amp	0.984	1
SF3B1	UBC	0.984	1
SF3B1	TGS1	0.984	1
SMAD4	13q-Del	0.984	1
SMAD4	Del_6q15	0.984	1
TBX3	DOCK11	0.984	1
TBX3	Amp_19q13.42	0.984	1
TCP10	Amp_12p13.33	0.984	1
WSCD2	BCORL1	0.984	1
ZFP36L1	16q-Del	0.984	1
ABCA8	CASZ1	0.984	1
AKD1	IRS4	0.984	1
AKD1	ZNF687	0.984	1
ATXN2	MED23	0.984	1
ATXN2	MUC6	0.984	1
ATXN2	RBMX	0.984	1
ATXN2	Amp_4q13.3	0.984	1
DLX6	SPRR2B	0.984	1
DLX6	SDC1	0.984	1
DLX6	Amp_10q22.3	0.984	1
DNAH12	DST	0.984	1
DNAH12	FHOD3	0.984	1
DNAH12	FRMPD2	0.984	1
DNAH12	TGS1	0.984	1
FBXO17	SPRR2B	0.984	1
FBXO17	SDC1	0.984	1
FHOD3	MYH9	0.984	1
FHOD3	WDR52	0.984	1
FHOD3	KDM6A	0.984	1
FHOD3	Amp_6p23	0.984	1
FXYD5	SPRR2B	0.984	1
FXYD5	SDC1	0.984	1
GPRIN2	Del_12q23.1	0.984	1
GYG2	Del_9q21.11	0.984	1
MLC1	Del_10q23.31	0.984	1
MYH9	TGS1	0.984	1
PRICKLE3	Amp_17q12	0.984	1
PRICKLE3	Del_1p22.1	0.984	1
SHISA4	SPRR2B	0.984	1
SHISA4	SDC1	0.984	1
SPRR2B	AKT2	0.984	1
SPRR2B	CDC42EP1	0.984	1
SPRR2B	MKL1	0.984	1
SPRR2B	NBPF9	0.984	1
UBC	WDR52	0.984	1
WDR52	TGS1	0.984	1
ZNF41	18p-Del	0.984	1
AKT2	SDC1	0.984	1
AKT2	Amp_10q22.3	0.984	1
ANGPT4	Amp_11p13	0.984	1
ATHL1	8q-Amp	0.984	1
ATHL1	Amp_6q21	0.984	1
ATHL1	Amp_19q13.42	0.984	1
ATHL1	Del_5q11.2	0.984	1
BCORL1	DLG1	0.984	1
BCORL1	MLL4	0.984	1
C15orf39	4q-Del	0.984	1
C15orf39	Del_9q21.11	0.984	1
CDC42EP1	SDC1	0.984	1
DLG1	Amp_19p13.12	0.984	1
IRS4	Del_12q24.31	0.984	1
MED23	RBMX	0.984	1
MED23	ZMYM3	0.984	1
MKL1	SDC1	0.984	1
MUC6	RBMX	0.984	1
NBPF9	SDC1	0.984	1
PSIP1	4q-Del	0.984	1
RBMX	ZMYM3	0.984	1
SDC1	Del_12p13.1	0.984	1
SLC35B2	4q-Del	0.984	1
17q-Amp	Del_6q15	0.984	1
20p-Amp	18q-Del	0.984	1
20q-Amp	Amp_11q14.1	0.984	1
20q-Amp	Del_3p21.31	0.984	1
20q-Amp	Del_9q21.11	0.984	1
5p-Amp	Del_10q26.3	0.984	1
11q-Del	17q-Del	0.984	1
16p-Del	6q-Del	0.984	1
17q-Del	Del_5q21.3	0.984	1
18q-Del	Del_10q26.3	0.984	1
1q-Del	Del_4p16.3	0.984	1
5q-Del	Amp_19q12	0.984	1
5q-Del	Del_21q11.2	0.984	1
6q-Del	Del_12p13.1	0.984	1
8p-Del	Amp_14q21.1	0.984	1
8p-Del	Amp_19q13.42	0.984	1
9p-Del	Amp_6p23	0.984	1
Amp_1q21.3	Del_16q24.3	0.984	1
Amp_6p23	Del_2q37.3	0.984	1
Amp_6q21	Del_10q26.3	0.984	1
Amp_8p11.21	Del_9q21.11	0.984	1
Amp_11q14.1	Amp_12p13.33	0.984	1
Amp_12q15	Del_3p21.31	0.984	1
Amp_15q26.3	Del_6p25.3	0.984	1
Amp_17q12	Del_9p21.3	0.984	1
Amp_17q12	Del_21q11.2	0.984	1
Amp_17q23.1	Del_22q13.32	0.984	1
Amp_19p13.12	Del_9q34.2	0.984	1
ACTL6B	RB1	0.985	1
ACTL6B	Amp_3q26.32	0.985	1
AQP12A	9p-Del	0.985	1
ASB10	COL6A5	0.985	1
ASB10	17q-Del	0.985	1
CBFB	FOXA1	0.985	1
EPDR1	Amp_4q13.3	0.985	1
FAM20C	Del_12q23.1	0.985	1
FAM20C	Del_12q24.31	0.985	1
FAM86B1	COL6A5	0.985	1
FBXW7	PTEN	0.985	1
FBXW7	Amp_3q26.32	0.985	1
GATA3	OR6C76	0.985	1
GPS2	PIWIL1	0.985	1
GPS2	RPGR	0.985	1
GPS2	TAF1L	0.985	1
HIST1H3B	ANKRD12	0.985	1
HIST1H3B	TNRC6B	0.985	1
KRAS	MAP2K4	0.985	1
MAP2K4	SPEN	0.985	1
MAP3K1	MUC6	0.985	1
MLL3	Amp_4q13.3	0.985	1
NCOR1	SHISA4	0.985	1
NCOR1	AKT2	0.985	1
NCOR1	CDC42EP1	0.985	1
PIK3R1	9q-Del	0.985	1
PIK3R1	Del_20p13	0.985	1
PIWIL1	THEM5	0.985	1
PIWIL1	GPRIN2	0.985	1
PIWIL1	FGFR2	0.985	1
PIWIL1	ZNF687	0.985	1
PTEN	BCORL1	0.985	1
PTEN	18q-Del	0.985	1
RB1	PRICKLE3	0.985	1
RB1	1q-Del	0.985	1
RB1	Amp_14q21.1	0.985	1
RB1	Del_15q13.1	0.985	1
RPGR	HRNR	0.985	1
RPGR	IRS4	0.985	1
RPGR	ZNF687	0.985	1
SF3B1	Del_11q23.3	0.985	1
TAF1L	HRNR	0.985	1
TAF1L	FGFR2	0.985	1
TBX3	OR4D10	0.985	1
TBX3	MR1	0.985	1
TBX3	TFE3	0.985	1
TCP10	Del_21q11.2	0.985	1
TP53	Del_9q21.11	0.985	1
ZFP36L1	22q-Del	0.985	1
ANKRD12	FGFR2	0.985	1
ANKRD12	IRS4	0.985	1
CCL13	Del_12q23.1	0.985	1
COL6A5	GRHL2	0.985	1
COL6A5	MORN1	0.985	1
COL6A5	PSIP1	0.985	1
COL6A5	TPP2	0.985	1
COL6A5	USP36	0.985	1
DLX6	17q-Amp	0.985	1
DLX6	Del_19p13.3	0.985	1
ERBB3	ZNF687	0.985	1
FBXO17	17q-Amp	0.985	1
GYG2	Amp_19q12	0.985	1
HLA-C	Amp_15q26.3	0.985	1
MORN1	Amp_12q15	0.985	1
NFE2L3	PCNXL2	0.985	1
NFE2L3	Del_11p15.5	0.985	1
PPEF1	TNRC6B	0.985	1
PPEF1	Amp_11q13.3	0.985	1
PRICKLE3	Amp_3q26.32	0.985	1
SPRR2B	17q-Del	0.985	1
SPRR2B	4q-Del	0.985	1
XBP1	Amp_14q21.1	0.985	1
ZNF41	TNRC6B	0.985	1
AKT2	17q-Amp	0.985	1
ATHL1	Amp_3q26.32	0.985	1
CABYR	9p-Del	0.985	1
CCDC82	18p-Del	0.985	1
CDC42EP1	Amp_4q13.3	0.985	1
CEP57	9p-Del	0.985	1
EIF4A2	PCNXL2	0.985	1
KCNN3	PCNXL2	0.985	1
KCNN3	Del_11p15.5	0.985	1
MKL1	17q-Amp	0.985	1
MUC6	Amp_12p13.33	0.985	1
MUC6	Del_15q13.1	0.985	1
NBPF9	17q-Amp	0.985	1
NBPF9	Amp_4q13.3	0.985	1
OXCT2	1p-Del	0.985	1
OXCT2	Del_12q23.1	0.985	1
OXCT2	Del_12q24.31	0.985	1
PAX2	Del_12q23.1	0.985	1
PSIP1	14q-Del	0.985	1
RHOA	4p-Del	0.985	1
SDC1	17q-Del	0.985	1
SDC1	4q-Del	0.985	1
SDC1	Del_21q11.2	0.985	1
SLC35B2	14q-Del	0.985	1
TNRC6B	ZNF687	0.985	1
TNRC6B	5q-Del	0.985	1
TTPAL	Amp_14q21.1	0.985	1
USP36	14q-Del	0.985	1
USP36	17q-Del	0.985	1
USP36	Del_21q11.2	0.985	1
ZBTB7C	Del_6q15	0.985	1
ZNF362	Del_6q15	0.985	1
ZNF362	Del_12q23.1	0.985	1
7q-Amp	8q-Amp	0.985	1
11q-Del	Amp_8p11.21	0.985	1
13q-Del	Amp_3q26.32	0.985	1
16p-Del	Del_12p13.1	0.985	1
16q-Del	Amp_8p11.21	0.985	1
17q-Del	Del_6q27	0.985	1
22q-Del	Amp_17q23.1	0.985	1
4p-Del	Del_6q27	0.985	1
5q-Del	Del_7q36.1	0.985	1
6q-Del	Del_1p36.13	0.985	1
Amp_1p22.3	Del_10q26.3	0.985	1
Amp_6p23	Del_9q34.2	0.985	1
Amp_6q21	Del_9p23	0.985	1
Amp_6q21	Del_13q14.2	0.985	1
Amp_8p11.21	Del_16q24.3	0.985	1
Amp_10q22.3	Del_14q24.1	0.985	1
Amp_14q21.1	Del_19p13.3	0.985	1
Amp_17q23.1	Del_12q23.1	0.985	1
Amp_17q23.1	Del_19q13.32	0.985	1
Del_7p22.3	Del_19q13.32	0.985	1
Del_16q24.3	Del_18q23	0.985	1
AARS	ERBB2	0.986	1
AQP12A	HRNR	0.986	1
AQP12A	22q-Del	0.986	1
ARID1A	PTHLH	0.986	1
ARID1A	SMAD2	0.986	1
ARID1A	ZFP36L2	0.986	1
ARID1A	OR4D10	0.986	1
ARID1A	MR1	0.986	1
ARID1A	TFE3	0.986	1
ARID1A	Amp_17q23.1	0.986	1
CBFB	GRHL2	0.986	1
CBFB	GYG2	0.986	1
CBFB	MORN1	0.986	1
CBFB	PSIP1	0.986	1
CBFB	TPP2	0.986	1
ERBB2	ZFP36L1	0.986	1
ERBB2	EIF4A2	0.986	1
FBXW7	DST	0.986	1
FBXW7	FHOD3	0.986	1
FBXW7	UBC	0.986	1
FBXW7	Amp_10p15.1	0.986	1
FOXA1	GRHL2	0.986	1
FOXA1	GYG2	0.986	1
FOXA1	USP36	0.986	1
KRAS	HRNR	0.986	1
MLL3	SPRR2B	0.986	1
MLL3	PSIP1	0.986	1
MLL3	TPP2	0.986	1
MLL3	USP36	0.986	1
MYB	ABCA8	0.986	1
NCOR1	COL6A5	0.986	1
PIK3R1	DST	0.986	1
PIK3R1	TGS1	0.986	1
PTHLH	NF1	0.986	1
PTPN22	AKD1	0.986	1
RPGR	SPEN	0.986	1
SMAD4	NF1	0.986	1
WSCD2	Amp_10q22.3	0.986	1
ZFP36L2	NF1	0.986	1
ABCA8	UBC	0.986	1
ABCA8	FRMPD2	0.986	1
ABCA8	Amp_1p22.3	0.986	1
AKD1	ANGPT4	0.986	1
AKD1	1q-Del	0.986	1
ATXN2	CASZ1	0.986	1
CCNL2	NF1	0.986	1
COL6A5	PCNXL2	0.986	1
DST	BCORL1	0.986	1
ERBB3	SPEN	0.986	1
HRNR	MLC1	0.986	1
HRNR	CEP57	0.986	1
MYH9	16q-Del	0.986	1
UBC	BCORL1	0.986	1
ANGPT4	13q-Del	0.986	1
ATHL1	17p-Del	0.986	1
BCORL1	FRMPD2	0.986	1
CASZ1	RBMX	0.986	1
CASZ1	ZMYM3	0.986	1
CCDC82	18q-Del	0.986	1
CXCR3	6q-Del	0.986	1
DOCK11	EIF4A2	0.986	1
MLL4	MUC6	0.986	1
MUC6	Del_6q27	0.986	1
NF1	16p-Del	0.986	1
PAX2	Del_8p23.2	0.986	1
PCNXL2	Amp_12p13.33	0.986	1
RBMX	Amp_19q12	0.986	1
TCP11	6q-Del	0.986	1
TFE3	Del_6q27	0.986	1
ZMYM3	17q-Del	0.986	1
16p-Amp	Amp_19q13.42	0.986	1
20p-Amp	Del_18q23	0.986	1
16p-Del	Amp_19q13.42	0.986	1
16p-Del	Del_1p36.13	0.986	1
17p-Del	1q-Del	0.986	1
17q-Del	Del_6p25.3	0.986	1
1p-Del	Del_17p12	0.986	1
4p-Del	Amp_11p13	0.986	1
4q-Del	Del_12p13.1	0.986	1
9p-Del	Del_21q11.2	0.986	1
Amp_1q21.3	Del_15q13.1	0.986	1
Amp_8p11.23	Del_9p21.3	0.986	1
Amp_8q24.21	Del_19q13.32	0.986	1
Amp_10p15.1	Amp_20q13.2	0.986	1
Amp_11q13.3	Del_6q27	0.986	1
Amp_11q13.3	Del_18q23	0.986	1
Amp_11q14.1	Del_21q11.2	0.986	1
Amp_13q34	Del_17q21.31	0.986	1
Amp_17q12	Del_7q36.1	0.986	1
Amp_17q12	Del_12p13.1	0.986	1
Del_9p21.3	Del_16q24.3	0.986	1
Del_9q21.11	Del_16q24.3	0.986	1
APC	GPS2	0.987	1
APC	HRNR	0.987	1
APC	ZNF41	0.987	1
APC	FGFR2	0.987	1
AQP12A	SPEN	0.987	1
AQP12A	7q-Amp	0.987	1
EPDR1	16p-Del	0.987	1
GPS2	DNAH12	0.987	1
HIST1H3B	MYH9	0.987	1
HIST1H3B	KDM6A	0.987	1
KRAS	SPEN	0.987	1
NCOR1	CASZ1	0.987	1
NCOR1	16p-Del	0.987	1
SF3B1	PPEF1	0.987	1
TCP10	Del_20p13	0.987	1
THEM5	WDR52	0.987	1
CCNL2	Del_6p25.3	0.987	1
DLX6	16p-Del	0.987	1
DLX6	Amp_8q24.21	0.987	1
DNAH12	IRS4	0.987	1
DNAH12	ZNF687	0.987	1
FXYD5	16p-Del	0.987	1
GPRIN2	WDR52	0.987	1
HLA-C	5q-Del	0.987	1
HLA-C	Del_15q13.1	0.987	1
OR2T35	Del_19q13.32	0.987	1
PPEF1	WDR52	0.987	1
PPEF1	KDM6A	0.987	1
PPEF1	20p-Amp	0.987	1
PRICKLE3	1p-Del	0.987	1
SHISA4	16p-Del	0.987	1
WDR52	IRS4	0.987	1
WDR52	ZNF687	0.987	1
ZNF41	Del_19q13.32	0.987	1
CABYR	SPEN	0.987	1
CABYR	Amp_17q23.1	0.987	1
CDC42EP1	8q-Amp	0.987	1
CXCR3	SPEN	0.987	1
CXCR3	7q-Amp	0.987	1
IRS4	KDM6A	0.987	1
KCNN3	Del_4q35.1	0.987	1
MED23	Del_7q36.1	0.987	1
MLL4	17q-Amp	0.987	1
MLL4	Del_12p13.1	0.987	1
MUC6	16p-Del	0.987	1
MUC6	Del_22q13.32	0.987	1
NBPF9	16p-Del	0.987	1
NBPF9	Amp_8q24.21	0.987	1
PAX2	Del_19q13.32	0.987	1
RBMX	16p-Del	0.987	1
RHOA	SPEN	0.987	1
RHOA	Amp_17q23.1	0.987	1
SLC35B2	Del_17q21.31	0.987	1
SPEN	TCP11	0.987	1
USP36	Del_17q21.31	0.987	1
ZNF362	Del_19q13.32	0.987	1
ZNF687	Del_5q21.3	0.987	1
5p-Amp	Amp_11q14.1	0.987	1
7p-Amp	Amp_1p22.3	0.987	1
13q-Del	Amp_1p22.3	0.987	1
16p-Del	Del_18q23	0.987	1
18p-Del	Del_6q27	0.987	1
5q-Del	Amp_8p11.21	0.987	1
5q-Del	Del_11q23.3	0.987	1
9p-Del	Amp_10q22.3	0.987	1
Amp_1q44	Amp_3p25.1	0.987	1
Amp_3q26.32	Amp_14q21.1	0.987	1
Amp_3q26.32	Del_2q37.3	0.987	1
Amp_11q14.1	Amp_19q13.42	0.987	1
Amp_12p13.33	Del_17q21.31	0.987	1
Amp_15q26.3	Del_12p13.1	0.987	1
Amp_20q13.2	Del_14q24.1	0.987	1
Del_1p36.13	Del_6p25.3	0.987	1
Del_6q27	Del_11p15.5	0.987	1
Del_19q13.32	Del_21q11.2	0.987	1
AARS	Amp_11p13	0.988	1
ACTL6B	CTCF	0.988	1
ACTL6B	4p-Del	0.988	1
ACTL6B	Del_12q23.1	0.988	1
ARID1A	Amp_11q13.3	0.988	1
CASP8	ATXN2	0.988	1
CASP8	MED23	0.988	1
CASP8	MUC6	0.988	1
CASP8	ZMYM3	0.988	1
CDH1	MED23	0.988	1
CDKN1B	CTCF	0.988	1
CDKN1B	PIWIL1	0.988	1
CDKN1B	RPGR	0.988	1
CDKN1B	ANKRD12	0.988	1
CDKN1B	ERBB3	0.988	1
CDKN1B	TNRC6B	0.988	1
CTCF	PTPN22	0.988	1
CTCF	1q-Del	0.988	1
FAM20C	SPRR2B	0.988	1
FAM20C	SDC1	0.988	1
FBXW7	GPRIN2	0.988	1
FBXW7	PPEF1	0.988	1
FBXW7	ZNF41	0.988	1
FBXW7	FGFR2	0.988	1
FBXW7	Amp_15q26.3	0.988	1
FBXW7	Del_10q26.3	0.988	1
FOXA1	17q-Amp	0.988	1
FOXA1	11q-Del	0.988	1
GPS2	7p-Amp	0.988	1
HIST1H3B	BCORL1	0.988	1
HLA-DRB5	SPRR2B	0.988	1
HLA-DRB5	SDC1	0.988	1
HLA-DRB5	7p-Amp	0.988	1
MLL3	PCNXL2	0.988	1
MYB	ZMYM3	0.988	1
PIK3R1	PPEF1	0.988	1
PIK3R1	ZNF41	0.988	1
PIK3R1	FGFR2	0.988	1
PIK3R1	IRS4	0.988	1
PIK3R1	ZNF687	0.988	1
PIWIL1	PTPN22	0.988	1
PIWIL1	ANGPT4	0.988	1
PTEN	MKL1	0.988	1
PTEN	ZMYM3	0.988	1
PTPN22	TNRC6B	0.988	1
PTPN22	Del_10q26.3	0.988	1
RAB42	SPRR2B	0.988	1
RAB42	SDC1	0.988	1
RB1	HLA-C	0.988	1
RB1	Del_5q11.2	0.988	1
RPGR	ANGPT4	0.988	1
RPGR	ATHL1	0.988	1
SF3B1	SPEN	0.988	1
SMAD2	COL6A5	0.988	1
TAF1L	PRICKLE3	0.988	1
TBL1XR1	ANKRD12	0.988	1
TBL1XR1	ERBB3	0.988	1
TCP10	PCNXL2	0.988	1
THEM5	7p-Amp	0.988	1
THEM5	Amp_6p23	0.988	1
TP53	Del_12q23.1	0.988	1
TP53	Del_12q24.31	0.988	1
WSCD2	DLG1	0.988	1
ZFP36L1	5p-Amp	0.988	1
ABCA8	PPEF1	0.988	1
ABCA8	ZNF687	0.988	1
ATXN7L1	COL6A5	0.988	1
ATXN7L1	Del_12p13.1	0.988	1
CCL13	SPRR2B	0.988	1
CCL13	SDC1	0.988	1
CCL13	7p-Amp	0.988	1
CCNL2	Del_12p13.1	0.988	1
COL6A5	OR4D10	0.988	1
COL6A5	17p-Del	0.988	1
DLX6	Del_15q13.1	0.988	1
DNAH12	SPEN	0.988	1
DST	6q-Del	0.988	1
ERBB3	PRICKLE3	0.988	1
ERBB3	ATHL1	0.988	1
FHOD3	RBMX	0.988	1
GRHL2	PCNXL2	0.988	1
GYG2	PCNXL2	0.988	1
HRNR	7p-Amp	0.988	1
ICOSLG	Del_5q21.3	0.988	1
MORN1	PCNXL2	0.988	1
OR2T35	SPRR2B	0.988	1
OR2T35	SDC1	0.988	1
PPEF1	Amp_8p11.21	0.988	1
PPEF1	Amp_20q13.2	0.988	1
SPRR2B	XBP1	0.988	1
SPRR2B	OXCT2	0.988	1
SPRR2B	PAX2	0.988	1
SPRR2B	RHBG	0.988	1
SPRR2B	TTPAL	0.988	1
SPRR2B	ZBTB7C	0.988	1
SPRR2B	ZNF362	0.988	1
UBC	MUC6	0.988	1
UBC	ZMYM3	0.988	1
XBP1	SDC1	0.988	1
XBP1	7p-Amp	0.988	1
ANGPT4	TNRC6B	0.988	1
ATHL1	TNRC6B	0.988	1
BCORL1	Amp_1q44	0.988	1
BCORL1	Amp_17q23.1	0.988	1
CASZ1	MLL4	0.988	1
CDC42EP1	Amp_1q44	0.988	1
CEP57	20p-Amp	0.988	1
FRMPD2	MUC6	0.988	1
FRMPD2	RBMX	0.988	1
IRS4	Amp_6p23	0.988	1
KCNN3	Amp_19q13.42	0.988	1
MUC6	TGS1	0.988	1
OXCT2	SDC1	0.988	1
OXCT2	Del_7p22.3	0.988	1
PAX2	SDC1	0.988	1
PCNXL2	PSIP1	0.988	1
PCNXL2	TPP2	0.988	1
RHBG	SDC1	0.988	1
RHBG	Del_7p22.3	0.988	1
RIBC1	SDC1	0.988	1
SDC1	TTPAL	0.988	1
SDC1	ZBTB7C	0.988	1
SDC1	ZNF362	0.988	1
SDC1	Del_13q14.2	0.988	1
TARBP2	20p-Amp	0.988	1
TNRC6B	Amp_1q21.3	0.988	1
20q-Amp	Del_10q26.3	0.988	1
7p-Amp	Amp_10p15.1	0.988	1
8p-Amp	Amp_19q13.42	0.988	1
8q-Amp	Amp_11p13	0.988	1
1p-Del	Del_5q21.3	0.988	1
1q-Del	4p-Del	0.988	1
1q-Del	Del_12q23.1	0.988	1
4p-Del	Amp_15q26.3	0.988	1
4q-Del	Amp_13q34	0.988	1
Amp_1p22.3	Del_19p13.3	0.988	1
Amp_1q44	Del_12q23.1	0.988	1
Amp_3q26.32	Del_7p22.3	0.988	1
Amp_8q24.21	Del_11q23.3	0.988	1
Amp_8q24.21	Del_14q24.1	0.988	1
Amp_10q22.3	Del_9q34.2	0.988	1
Amp_11q13.3	Del_13q14.2	0.988	1
Amp_11q14.1	Amp_20q13.2	0.988	1
Amp_12q15	Amp_19q13.42	0.988	1
Amp_12q15	Del_19q13.32	0.988	1
Amp_17q23.1	Del_15q13.1	0.988	1
Del_2q37.3	Del_16q24.3	0.988	1
Del_6q27	Del_7q36.1	0.988	1
Del_7p22.3	Del_19p13.3	0.988	1
ACTL6B	DNAH12	0.989	1
APC	PTPN22	0.989	1
APC	PRICKLE3	0.989	1
APC	ANGPT4	0.989	1
ASB10	ERBB2	0.989	1
C1QTNF5	4q-Del	0.989	1
CBFB	SMAD4	0.989	1
CBFB	CCNL2	0.989	1
CBFB	OR4D10	0.989	1
CBFB	MR1	0.989	1
CBFB	TFE3	0.989	1
CDKN1B	KDM6A	0.989	1
ERBB2	GRHL2	0.989	1
ERBB2	PSIP1	0.989	1
ERBB2	TPP2	0.989	1
FAM86B1	DOCK11	0.989	1
FAM86B1	Amp_15q26.3	0.989	1
FAM86B1	Del_22q13.32	0.989	1
FOXA1	SMAD4	0.989	1
FOXA1	ATXN7L1	0.989	1
FOXA1	ANKRD20A4	0.989	1
FOXA1	MR1	0.989	1
FOXA1	Del_11q23.3	0.989	1
GATA3	Amp_1q44	0.989	1
HIST1H3B	Del_7p22.3	0.989	1
MLL3	20q-Amp	0.989	1
NCOR1	FHOD3	0.989	1
NCOR1	FRMPD2	0.989	1
PIK3CA	CCL13	0.989	1
PIK3CA	OXCT2	0.989	1
PIK3CA	ZBTB7C	0.989	1
PIK3R1	HRNR	0.989	1
PIK3R1	17p-Del	0.989	1
PTPN22	SF3B1	0.989	1
PTPN22	MYH9	0.989	1
PTPN22	18p-Del	0.989	1
PTPN22	18q-Del	0.989	1
RPGR	Amp_20q13.2	0.989	1
RUNX1	ERBB3	0.989	1
RUNX1	RHOA	0.989	1
RUNX1	TCP11	0.989	1
SF3B1	PRICKLE3	0.989	1
SF3B1	ATHL1	0.989	1
SMAD2	Del_3p21.31	0.989	1
TBL1XR1	MYH9	0.989	1
TBX3	CEP57	0.989	1
TBX3	RHOA	0.989	1
TBX3	TARBP2	0.989	1
VCPIP1	AKD1	0.989	1
ZFP36L1	AKD1	0.989	1
AKD1	HLA-C	0.989	1
AKD1	Del_9q34.2	0.989	1
CCL13	11q-Del	0.989	1
CCNL2	Del_3p21.31	0.989	1
DNAH12	ATHL1	0.989	1
DST	FBXO17	0.989	1
DST	FXYD5	0.989	1
DST	CDC42EP1	0.989	1
DST	MED23	0.989	1
DST	MUC6	0.989	1
DST	NF1	0.989	1
DST	RBMX	0.989	1
DST	ZMYM3	0.989	1
FHOD3	17q-Amp	0.989	1
MORN1	DOCK11	0.989	1
MYH9	PRICKLE3	0.989	1
PPEF1	8p-Del	0.989	1
PRICKLE3	KDM6A	0.989	1
SHISA4	Amp_11q14.1	0.989	1
WDR52	ANGPT4	0.989	1
WDR52	ATHL1	0.989	1
ANGPT4	KDM6A	0.989	1
ATHL1	KDM6A	0.989	1
C15orf39	Amp_15q26.3	0.989	1
CDC42EP1	16p-Amp	0.989	1
DOCK11	SLC35B2	0.989	1
DOCK11	Amp_3p25.1	0.989	1
DOCK11	Del_7p22.3	0.989	1
DOCK11	Del_10q23.31	0.989	1
KCNN3	20q-Amp	0.989	1
MKL1	Amp_1q21.3	0.989	1
MLL4	17q-Del	0.989	1
MUC6	9q-Del	0.989	1
NF1	Del_10q26.3	0.989	1
OXCT2	Del_3p21.31	0.989	1
PAX2	Del_3p21.31	0.989	1
PAX2	Del_9p21.3	0.989	1
TFE3	Del_3p21.31	0.989	1
TGS1	Amp_10q22.3	0.989	1
ZBTB7C	11q-Del	0.989	1
ZNF362	Del_3p21.31	0.989	1
20p-Amp	9q-Del	0.989	1
7p-Amp	Amp_11p13	0.989	1
7p-Amp	Del_7q36.1	0.989	1
11p-Del	Amp_17q23.1	0.989	1
11q-Del	Del_15q13.1	0.989	1
16q-Del	Amp_1p22.3	0.989	1
18p-Del	Amp_12q15	0.989	1
18p-Del	Del_7q36.1	0.989	1
18q-Del	1q-Del	0.989	1
18q-Del	6q-Del	0.989	1
1p-Del	Del_6q15	0.989	1
1p-Del	Del_12p13.1	0.989	1
6q-Del	Del_9q21.11	0.989	1
8p-Del	Amp_11q14.1	0.989	1
8p-Del	Del_12p13.1	0.989	1
Amp_1p22.3	Del_13q14.2	0.989	1
Amp_3p25.1	Amp_10p15.1	0.989	1
Amp_3q26.32	Del_9q34.2	0.989	1
Amp_3q26.32	Del_11p15.5	0.989	1
Amp_4q13.3	Del_2q37.3	0.989	1
Amp_8p11.23	Del_1p22.1	0.989	1
Amp_10q22.3	Del_15q13.1	0.989	1
Amp_11p13	Del_4p16.3	0.989	1
Amp_19p13.12	Del_17p12	0.989	1
Del_9p23	Del_16q24.3	0.989	1
AARS	RPGR	0.99	1
AARS	ANKRD12	0.99	1
AARS	ERBB3	0.99	1
AARS	TNRC6B	0.99	1
ACTL6B	Del_17p12	0.99	1
ARID1A	CCDC82	0.99	1
ARID1A	CXCR3	0.99	1
ARID1A	RHOA	0.99	1
ARID1A	TCP11	0.99	1
ASB10	RB1	0.99	1
CASP8	WSCD2	0.99	1
CASP8	DLG1	0.99	1
CASP8	MLL4	0.99	1
CDH1	FXYD5	0.99	1
CDH1	CDC42EP1	0.99	1
CDH1	SPEN	0.99	1
FBXW7	ANGPT4	0.99	1
FBXW7	ATHL1	0.99	1
FBXW7	SPEN	0.99	1
FOXA1	16q-Del	0.99	1
GATA3	DOCK11	0.99	1
GATA3	9p-Del	0.99	1
GPS2	MUC6	0.99	1
HIST1H3B	RBMX	0.99	1
KRAS	NF1	0.99	1
MAP3K1	MR1	0.99	1
PIK3R1	PTPN22	0.99	1
PIK3R1	TBL1XR1	0.99	1
PIK3R1	ATHL1	0.99	1
PIWIL1	VCPIP1	0.99	1
PIWIL1	ZFP36L1	0.99	1
PIWIL1	NFE2L3	0.99	1
PTEN	WSCD2	0.99	1
PTHLH	Amp_12q15	0.99	1
PTHLH	Del_9q21.11	0.99	1
PTPN22	BCORL1	0.99	1
RB1	C15orf39	0.99	1
RB1	PSIP1	0.99	1
RB1	TPP2	0.99	1
RPGR	NFE2L3	0.99	1
RPGR	EIF4A2	0.99	1
RPGR	Amp_14q21.1	0.99	1
SMAD4	17q-Del	0.99	1
SMAD4	Del_21q11.2	0.99	1
TAF1L	TBX3	0.99	1
TAF1L	VCPIP1	0.99	1
THEM5	MUC6	0.99	1
TP53	FHOD3	0.99	1
TP53	Del_7p22.3	0.99	1
VCPIP1	ANKRD12	0.99	1
VCPIP1	ERBB3	0.99	1
VCPIP1	TNRC6B	0.99	1
ABCA8	ATHL1	0.99	1
ATXN2	PPEF1	0.99	1
ATXN2	ZNF41	0.99	1
ATXN2	IRS4	0.99	1
ATXN2	Del_3p21.31	0.99	1
ATXN7L1	Amp_12p13.33	0.99	1
CCL13	Amp_10q22.3	0.99	1
DLX6	Del_5q11.2	0.99	1
ERBB3	1p-Del	0.99	1
FHOD3	MLL4	0.99	1
GPRIN2	MUC6	0.99	1
HLA-C	TNRC6B	0.99	1
HLA-C	Amp_3q26.32	0.99	1
HLA-C	Amp_13q34	0.99	1
MLC1	NF1	0.99	1
MYH9	Amp_11q13.3	0.99	1
NFE2L3	Del_8p23.2	0.99	1
OR6C76	NF1	0.99	1
PPEF1	MUC6	0.99	1
PRICKLE3	BCORL1	0.99	1
SHISA4	Amp_3q26.32	0.99	1
SHISA4	Del_4p16.3	0.99	1
UBC	CASZ1	0.99	1
UBC	DLG1	0.99	1
ZNF41	ZMYM3	0.99	1
AKT2	Del_1p22.1	0.99	1
ANKRD20A4	Amp_12p13.33	0.99	1
ATHL1	Del_19q13.32	0.99	1
CASZ1	TGS1	0.99	1
CEP57	1q-Amp	0.99	1
DLG1	TGS1	0.99	1
DOCK11	Del_7q36.1	0.99	1
DOCK11	Del_10q26.3	0.99	1
FGFR2	RBMX	0.99	1
FGFR2	ZMYM3	0.99	1
FGFR2	Amp_19p13.12	0.99	1
FRMPD2	MLL4	0.99	1
IRS4	ZMYM3	0.99	1
KCNN3	Amp_3q26.32	0.99	1
MED23	ZNF687	0.99	1
MED23	Del_3p21.31	0.99	1
MR1	17q-Del	0.99	1
NBPF9	Amp_8p11.23	0.99	1
NBPF9	Del_5q11.2	0.99	1
NF1	RHOA	0.99	1
NF1	TCP11	0.99	1
TFE3	17q-Del	0.99	1
TNRC6B	1q-Amp	0.99	1
20q-Amp	18p-Del	0.99	1
5p-Amp	Amp_3p25.1	0.99	1
5p-Amp	Amp_6q21	0.99	1
7p-Amp	Amp_20q13.2	0.99	1
8p-Amp	Amp_1q21.3	0.99	1
8p-Amp	Amp_10p15.1	0.99	1
11p-Del	Amp_1q21.3	0.99	1
11q-Del	4q-Del	0.99	1
14q-Del	Amp_13q34	0.99	1
14q-Del	Del_16q24.3	0.99	1
15q-Del	Amp_1q21.3	0.99	1
16q-Del	8p-Del	0.99	1
16q-Del	9p-Del	0.99	1
16q-Del	Del_14q24.1	0.99	1
4p-Del	Amp_8q24.21	0.99	1
4q-Del	Amp_10p15.1	0.99	1
Amp_1p22.3	Del_1p36.13	0.99	1
Amp_3p25.1	Amp_17q12	0.99	1
Amp_3p25.1	Amp_19q12	0.99	1
Amp_4q13.3	Amp_11q13.3	0.99	1
Amp_6q21	Amp_19q13.42	0.99	1
Amp_6q21	Del_7p22.3	0.99	1
Amp_8p11.23	Del_21q11.2	0.99	1
Amp_13q34	Del_21q11.2	0.99	1
Amp_14q21.1	Del_18q23	0.99	1
Amp_15q26.3	Del_9q21.11	0.99	1
Amp_17q23.1	Del_4p16.3	0.99	1
Amp_19q12	Del_7p22.3	0.99	1
Amp_19q13.42	Del_9q34.2	0.99	1
Del_1p36.13	Del_7p22.3	0.99	1
Del_4p16.3	Del_6q15	0.99	1
Del_5q11.2	Del_7q36.1	0.99	1
Del_6q15	Del_19q13.32	0.99	1
Del_7p22.3	Del_21q11.2	0.99	1
AARS	SF3B1	0.991	1
AARS	MYH9	0.991	1
ACTL6B	Del_3p21.31	0.991	1
APC	TBX3	0.991	1
APC	VCPIP1	0.991	1
APC	HLA-C	0.991	1
APC	NFE2L3	0.991	1
APC	EIF4A2	0.991	1
ASB10	5q-Del	0.991	1
CASP8	UBC	0.991	1
CASP8	FRMPD2	0.991	1
CBFB	RB1	0.991	1
CBFB	16p-Amp	0.991	1
FAM20C	Amp_4q13.3	0.991	1
GPS2	WSCD2	0.991	1
HIST1H3B	MLL4	0.991	1
HIST1H3B	Amp_10q22.3	0.991	1
HLA-DRB5	NCOR1	0.991	1
MAP2K4	MED23	0.991	1
MLL3	SMAD2	0.991	1
MLL3	SMAD4	0.991	1
MLL3	ATXN7L1	0.991	1
MLL3	MR1	0.991	1
MLL3	TFE3	0.991	1
PIK3CA	Amp_1q44	0.991	1
PIWIL1	NF1	0.991	1
PTHLH	PCNXL2	0.991	1
RB1	14q-Del	0.991	1
RUNX1	SPEN	0.991	1
SF3B1	EIF4A2	0.991	1
SMAD2	17p-Del	0.991	1
THEM5	WSCD2	0.991	1
THEM5	MLL4	0.991	1
TP53	16p-Del	0.991	1
TP53	Del_8p23.2	0.991	1
VCPIP1	DNAH12	0.991	1
VCPIP1	KDM6A	0.991	1
ZFP36L1	KDM6A	0.991	1
ABCA8	Del_11q23.3	0.991	1
AKD1	GYG2	0.991	1
AKD1	TPP2	0.991	1
AKD1	Del_12p13.1	0.991	1
ANKRD12	Del_12q23.1	0.991	1
ANKRD12	Del_12q24.31	0.991	1
DNAH12	HLA-C	0.991	1
DST	CASZ1	0.991	1
DST	Del_9q21.11	0.991	1
FHOD3	FRMPD2	0.991	1
FHOD3	TGS1	0.991	1
FXYD5	SPEN	0.991	1
GPRIN2	DLG1	0.991	1
HLA-C	MYH9	0.991	1
HLA-C	Amp_14q21.1	0.991	1
HRNR	MUC6	0.991	1
HRNR	NBPF9	0.991	1
HRNR	ZMYM3	0.991	1
MLC1	11p-Del	0.991	1
MYH9	NFE2L3	0.991	1
MYH9	EIF4A2	0.991	1
NFE2L3	WDR52	0.991	1
NFE2L3	KDM6A	0.991	1
OR2T35	Amp_4q13.3	0.991	1
PPEF1	DLG1	0.991	1
PPEF1	MLL4	0.991	1
PPEF1	Del_18q23	0.991	1
PRICKLE3	Del_7p22.3	0.991	1
SHISA4	SPEN	0.991	1
SPRR2B	SDC1	0.991	1
UBC	TGS1	0.991	1
WDR52	Amp_13q34	0.991	1
ZNF41	CASZ1	0.991	1
ZNF41	DLG1	0.991	1
AKT2	SPEN	0.991	1
AKT2	Del_10q23.31	0.991	1
ANGPT4	Del_9p21.3	0.991	1
ATHL1	Amp_3p25.1	0.991	1
ATHL1	Del_3p21.31	0.991	1
ATHL1	Del_7p22.3	0.991	1
CASZ1	FGFR2	0.991	1
CDC42EP1	SPEN	0.991	1
DLG1	IRS4	0.991	1
DLG1	20q-Amp	0.991	1
EIF4A2	KDM6A	0.991	1
FGFR2	MLL4	0.991	1
FGFR2	Del_2q37.3	0.991	1
FGFR2	Del_18q23	0.991	1
MKL1	SPEN	0.991	1
MR1	17p-Del	0.991	1
MUC6	Amp_15q26.3	0.991	1
PCNXL2	TFE3	0.991	1
RHBG	17q-Amp	0.991	1
RHOA	Amp_17q12	0.991	1
RIBC1	Amp_4q13.3	0.991	1
SDC1	Amp_6q21	0.991	1
TARBP2	Amp_17q12	0.991	1
TTPAL	Amp_4q13.3	0.991	1
USP36	Amp_1q21.3	0.991	1
7q-Amp	Amp_1p22.3	0.991	1
7q-Amp	Amp_15q26.3	0.991	1
11q-Del	Del_12q24.31	0.991	1
11q-Del	Del_20p13	0.991	1
15q-Del	Del_19q13.32	0.991	1
16p-Del	1p-Del	0.991	1
17p-Del	Amp_19p13.12	0.991	1
17q-Del	Amp_3q26.32	0.991	1
18p-Del	Amp_17q23.1	0.991	1
18q-Del	Del_19q13.32	0.991	1
1p-Del	Del_9q21.11	0.991	1
4q-Del	Del_6q27	0.991	1
Amp_1q21.3	Amp_8p11.21	0.991	1
Amp_4q13.3	Amp_17q12	0.991	1
Amp_4q13.3	Del_4q35.1	0.991	1
Amp_6p23	Del_19p13.3	0.991	1
Amp_6q21	Del_17p12	0.991	1
Amp_8p11.21	Amp_10p15.1	0.991	1
Amp_8q24.21	Amp_15q26.3	0.991	1
Amp_10p15.1	Del_12q23.1	0.991	1
Amp_10p15.1	Del_14q24.1	0.991	1
Amp_11q13.3	Del_6q15	0.991	1
Amp_14q21.1	Del_8p23.2	0.991	1
Amp_14q21.1	Del_15q13.1	0.991	1
Amp_15q26.3	Del_14q24.1	0.991	1
Amp_15q26.3	Del_18q23	0.991	1
Amp_17q23.1	Del_1p22.1	0.991	1
Amp_19q13.42	Del_11p15.5	0.991	1
Del_1p22.1	Del_6q15	0.991	1
Del_4q35.1	Del_9q21.11	0.991	1
Del_7p22.3	Del_10q23.31	0.991	1
Del_7q36.1	Del_8p23.2	0.991	1
Del_11q23.3	Del_12q24.31	0.991	1
AARS	FBXW7	0.992	1
AARS	ABCA8	0.992	1
AARS	BCORL1	0.992	1
ACTL6B	MUC6	0.992	1
ACTL6B	ZMYM3	0.992	1
APC	ARID1A	0.992	1
AQP12A	Del_6p25.3	0.992	1
AQP12A	Del_11q23.3	0.992	1
ASB10	22q-Del	0.992	1
ASB10	Del_15q13.1	0.992	1
C1QTNF5	ERBB2	0.992	1
CBFB	CEP57	0.992	1
CBFB	CXCR3	0.992	1
CDH1	FOXA1	0.992	1
CDKN1B	ATXN2	0.992	1
CDKN1B	RBMX	0.992	1
CTCF	GRHL2	0.992	1
CTCF	C15orf39	0.992	1
CTCF	TPP2	0.992	1
ERBB2	PTHLH	0.992	1
ERBB2	ATXN7L1	0.992	1
ERBB2	MR1	0.992	1
ERBB2	PCNXL2	0.992	1
FAM20C	Del_17q21.31	0.992	1
FAM86B1	Amp_19q13.42	0.992	1
FAM86B1	Del_4q35.1	0.992	1
FBXW7	HLA-C	0.992	1
FBXW7	KCNN3	0.992	1
FBXW7	5p-Amp	0.992	1
FOXA1	ICOSLG	0.992	1
FOXA1	MLC1	0.992	1
FOXA1	OR6C76	0.992	1
FOXA1	CCDC82	0.992	1
GATA3	VCPIP1	0.992	1
HIST1H2BC	13q-Del	0.992	1
KRAS	COL6A5	0.992	1
MLL3	TBX3	0.992	1
NCOR1	ZNF41	0.992	1
NCOR1	FGFR2	0.992	1
NCOR1	IRS4	0.992	1
PIK3R1	Del_17q21.31	0.992	1
PIWIL1	GRHL2	0.992	1
PIWIL1	GYG2	0.992	1
PIWIL1	MORN1	0.992	1
PIWIL1	PSIP1	0.992	1
PTEN	1p-Del	0.992	1
PTEN	Del_1p22.1	0.992	1
PTHLH	15q-Del	0.992	1
PTPN22	ATXN2	0.992	1
PTPN22	MUC6	0.992	1
PTPN22	Amp_11q13.3	0.992	1
RAB42	TP53	0.992	1
RB1	9p-Del	0.992	1
RPGR	GYG2	0.992	1
RPGR	MORN1	0.992	1
RPGR	PSIP1	0.992	1
RPGR	SLC35B2	0.992	1
RPGR	TPP2	0.992	1
RUNX1	DLX6	0.992	1
RUNX1	FBXO17	0.992	1
RUNX1	FXYD5	0.992	1
RUNX1	CDC42EP1	0.992	1
RUNX1	MKL1	0.992	1
SMAD2	DOCK11	0.992	1
SMAD2	15q-Del	0.992	1
TAF1L	MORN1	0.992	1
TAF1L	PSIP1	0.992	1
TAF1L	SLC35B2	0.992	1
TAF1L	TPP2	0.992	1
TAF1L	USP36	0.992	1
TCP10	Del_4q35.1	0.992	1
TP53	15q-Del	0.992	1
TP53	Del_19q13.32	0.992	1
VCPIP1	BCORL1	0.992	1
ZFP36L1	13q-Del	0.992	1
ZFP36L2	Amp_8p11.23	0.992	1
ABCA8	NFE2L3	0.992	1
ABCA8	EIF4A2	0.992	1
ABCA8	Del_17q21.31	0.992	1
AKD1	Amp_3q26.32	0.992	1
ANKRD12	MORN1	0.992	1
ATXN2	PRICKLE3	0.992	1
ATXN2	Amp_17q23.1	0.992	1
ATXN7L1	Del_20p13	0.992	1
COL6A5	DST	0.992	1
COL6A5	MLC1	0.992	1
COL6A5	OR6C76	0.992	1
DLX6	8p-Amp	0.992	1
DLX6	Del_10q26.3	0.992	1
DNAH12	NF1	0.992	1
DST	Del_5q21.3	0.992	1
ERBB3	GYG2	0.992	1
ERBB3	PSIP1	0.992	1
ERBB3	SLC35B2	0.992	1
ERBB3	USP36	0.992	1
FXYD5	18p-Del	0.992	1
FXYD5	18q-Del	0.992	1
GRHL2	TNRC6B	0.992	1
GYG2	TNRC6B	0.992	1
GYG2	Amp_19q13.42	0.992	1
HRNR	NF1	0.992	1
HRNR	Del_10q26.3	0.992	1
ICOSLG	Del_11q23.3	0.992	1
MORN1	TNRC6B	0.992	1
NFE2L3	Del_10q26.3	0.992	1
OR4D10	DOCK11	0.992	1
PPEF1	17q-Amp	0.992	1
PPEF1	Amp_17q23.1	0.992	1
PPEF1	Del_17q21.31	0.992	1
PRICKLE3	MUC6	0.992	1
PRICKLE3	ZMYM3	0.992	1
SHISA4	4p-Del	0.992	1
SHISA4	Amp_11q13.3	0.992	1
SHISA4	Del_10q26.3	0.992	1
SPRR2B	8p-Del	0.992	1
SPRR2B	Amp_14q21.1	0.992	1
WDR52	NF1	0.992	1
AKT2	Del_10q26.3	0.992	1
ATHL1	MUC6	0.992	1
BCORL1	EIF4A2	0.992	1
BCORL1	Del_17q21.31	0.992	1
C15orf39	TNRC6B	0.992	1
C15orf39	Del_4q35.1	0.992	1
DLG1	Del_22q13.32	0.992	1
DOCK11	MR1	0.992	1
DOCK11	PCNXL2	0.992	1
DOCK11	TFE3	0.992	1
FGFR2	Amp_4q13.3	0.992	1
FGFR2	Del_17q21.31	0.992	1
KDM6A	NF1	0.992	1
MED23	18q-Del	0.992	1
MKL1	18p-Del	0.992	1
MUC6	SPEN	0.992	1
MUC6	1q-Del	0.992	1
PAX2	Del_17p12	0.992	1
PSIP1	TNRC6B	0.992	1
RBMX	1q-Del	0.992	1
RHBG	16p-Del	0.992	1
RIBC1	16p-Del	0.992	1
SPEN	ZMYM3	0.992	1
TFE3	Amp_8p11.23	0.992	1
TGS1	1q-Amp	0.992	1
TPP2	5p-Amp	0.992	1
ZBTB7C	Del_17q21.31	0.992	1
ZNF362	Del_17p12	0.992	1
20p-Amp	Amp_6q21	0.992	1
20p-Amp	Amp_11p13	0.992	1
20p-Amp	Amp_17q12	0.992	1
20q-Amp	6q-Del	0.992	1
5p-Amp	Amp_1q44	0.992	1
7p-Amp	8p-Amp	0.992	1
8p-Amp	Amp_17q12	0.992	1
8p-Amp	Del_10q23.31	0.992	1
8q-Amp	Amp_3q26.32	0.992	1
11p-Del	Del_2q37.3	0.992	1
14q-Del	Amp_1p22.3	0.992	1
14q-Del	Amp_19p13.12	0.992	1
15q-Del	Del_8p23.2	0.992	1
17q-Del	Amp_19p13.12	0.992	1
18p-Del	Del_5q11.2	0.992	1
1p-Del	4p-Del	0.992	1
22q-Del	Del_4q35.1	0.992	1
4q-Del	8p-Del	0.992	1
5q-Del	9p-Del	0.992	1
8p-Del	Del_5q11.2	0.992	1
8p-Del	Del_6q27	0.992	1
9p-Del	Del_7p22.3	0.992	1
9q-Del	Del_8p23.2	0.992	1
Amp_3p25.1	Del_9p21.3	0.992	1
Amp_3p25.1	Del_10q26.3	0.992	1
Amp_3p25.1	Del_15q13.1	0.992	1
Amp_3q26.32	Del_9p21.3	0.992	1
Amp_4q13.3	Del_19q13.32	0.992	1
Amp_6p23	Amp_19p13.12	0.992	1
Amp_8p11.23	Amp_12q15	0.992	1
Amp_8p11.23	Del_1p36.13	0.992	1
Amp_8p11.21	Amp_11p13	0.992	1
Amp_8p11.21	Amp_19q13.42	0.992	1
Amp_8p11.21	Del_14q24.1	0.992	1
Amp_8q24.21	Del_12p13.1	0.992	1
Amp_10q22.3	Del_9p23	0.992	1
Amp_11p13	Amp_13q34	0.992	1
Amp_11p13	Amp_17q23.1	0.992	1
Amp_11p13	Amp_19p13.12	0.992	1
Amp_11p13	Del_18q23	0.992	1
Amp_11q14.1	Del_19q13.32	0.992	1
Amp_12p13.33	Del_12q23.1	0.992	1
Amp_12p13.33	Del_12q24.31	0.992	1
Amp_12p13.33	Del_21q11.2	0.992	1
Amp_12q15	Amp_15q26.3	0.992	1
Amp_12q15	Del_6q15	0.992	1
Amp_14q21.1	Amp_19q12	0.992	1
Amp_15q26.3	Del_7q36.1	0.992	1
Amp_19p13.12	Del_9q21.11	0.992	1
Amp_19q12	Del_15q13.1	0.992	1
Del_10q23.31	Del_12q23.1	0.992	1
AARS	ATXN2	0.993	1
AARS	MUC6	0.993	1
APC	GRHL2	0.993	1
APC	GYG2	0.993	1
APC	C15orf39	0.993	1
APC	PSIP1	0.993	1
APC	TPP2	0.993	1
APC	USP36	0.993	1
ARID1A	FXYD5	0.993	1
ARID1A	SHISA4	0.993	1
ARID1A	AKT2	0.993	1
ARID1A	CDC42EP1	0.993	1
ARID1A	MKL1	0.993	1
ARID1A	8p-Del	0.993	1
ASB10	Amp_13q34	0.993	1
CASP8	DST	0.993	1
CASP8	FGFR2	0.993	1
CASP8	ZNF687	0.993	1
CBFB	TNRC6B	0.993	1
CDKN1B	MLL4	0.993	1
CTCF	16p-Amp	0.993	1
CTCF	Del_12p13.1	0.993	1
ERBB2	NCOR1	0.993	1
FAM20C	DST	0.993	1
FOXA1	ANKRD12	0.993	1
FOXA1	ERBB3	0.993	1
GPS2	MYB	0.993	1
GPS2	UBC	0.993	1
GPS2	FRMPD2	0.993	1
HIST1H3B	FRMPD2	0.993	1
HIST1H3B	TGS1	0.993	1
HLA-DRB5	DST	0.993	1
MAP2K4	COL6A5	0.993	1
MLL3	DST	0.993	1
MLL3	UBC	0.993	1
MLL3	NF1	0.993	1
NCOR1	DOCK11	0.993	1
NCOR1	Del_7p22.3	0.993	1
PIK3CA	ABCA8	0.993	1
PIWIL1	COL6A5	0.993	1
PTEN	OXCT2	0.993	1
PTEN	PAX2	0.993	1
PTEN	RIBC1	0.993	1
PTEN	ZBTB7C	0.993	1
PTEN	9q-Del	0.993	1
PTHLH	AKD1	0.993	1
PTHLH	Del_17q21.31	0.993	1
PTPN22	WSCD2	0.993	1
PTPN22	CASZ1	0.993	1
PTPN22	Amp_10q22.3	0.993	1
RB1	SMAD2	0.993	1
RB1	ZFP36L2	0.993	1
RB1	OR4D10	0.993	1
RPGR	COL6A5	0.993	1
SF3B1	GYG2	0.993	1
SF3B1	PSIP1	0.993	1
SMAD2	AKD1	0.993	1
SMAD4	AKD1	0.993	1
SMAD4	Amp_15q26.3	0.993	1
SMAD4	Del_17q21.31	0.993	1
TAF1L	COL6A5	0.993	1
TBL1XR1	DLG1	0.993	1
TBL1XR1	MLL4	0.993	1
TBL1XR1	Del_16q24.3	0.993	1
TBX3	CDC42EP1	0.993	1
THEM5	Del_9p23	0.993	1
ZFP36L1	ATXN2	0.993	1
ZFP36L1	6q-Del	0.993	1
ZFP36L1	Del_6q27	0.993	1
ZFP36L2	AKD1	0.993	1
AKD1	CCNL2	0.993	1
AKD1	TFE3	0.993	1
ATXN2	HLA-C	0.993	1
ATXN2	NFE2L3	0.993	1
ATXN2	KCNN3	0.993	1
CCL13	1q-Amp	0.993	1
COL6A5	ERBB3	0.993	1
COL6A5	9p-Del	0.993	1
DLX6	Amp_20q13.2	0.993	1
DNAH12	GRHL2	0.993	1
DNAH12	C15orf39	0.993	1
DNAH12	PSIP1	0.993	1
DST	FHOD3	0.993	1
DST	UBC	0.993	1
DST	XBP1	0.993	1
DST	FRMPD2	0.993	1
DST	RHBG	0.993	1
DST	TGS1	0.993	1
DST	TTPAL	0.993	1
DST	ZNF362	0.993	1
ERBB3	Del_11q23.3	0.993	1
FBXO17	NF1	0.993	1
FHOD3	GPRIN2	0.993	1
FHOD3	ZNF41	0.993	1
FHOD3	FGFR2	0.993	1
FHOD3	IRS4	0.993	1
GYG2	WDR52	0.993	1
GYG2	KDM6A	0.993	1
HLA-C	MUC6	0.993	1
HRNR	CASZ1	0.993	1
MORN1	MYH9	0.993	1
MYH9	C15orf39	0.993	1
MYH9	PSIP1	0.993	1
MYH9	USP36	0.993	1
MYH9	Amp_1q44	0.993	1
NFE2L3	MUC6	0.993	1
NFE2L3	RBMX	0.993	1
PPEF1	UBC	0.993	1
PPEF1	TGS1	0.993	1
PRICKLE3	MLL4	0.993	1
UBC	ZNF687	0.993	1
WDR52	PSIP1	0.993	1
WDR52	SLC35B2	0.993	1
WDR52	TPP2	0.993	1
ZNF41	FRMPD2	0.993	1
ZNF41	TGS1	0.993	1
ZNF41	Del_6p25.3	0.993	1
ATHL1	CASZ1	0.993	1
ATHL1	MLL4	0.993	1
BCORL1	Amp_13q34	0.993	1
C15orf39	Amp_13q34	0.993	1
EIF4A2	MUC6	0.993	1
EIF4A2	RBMX	0.993	1
FGFR2	FRMPD2	0.993	1
FRMPD2	ZNF687	0.993	1
KCNN3	Del_6q27	0.993	1
KDM6A	PSIP1	0.993	1
KDM6A	USP36	0.993	1
MLL4	Del_3p21.31	0.993	1
MR1	Del_17q21.31	0.993	1
MUC6	5q-Del	0.993	1
NBPF9	NF1	0.993	1
NBPF9	Del_22q13.32	0.993	1
NF1	SPEN	0.993	1
PAX2	Del_9p23	0.993	1
RHOA	4q-Del	0.993	1
SDC1	Del_19q13.32	0.993	1
SLC35B2	Amp_13q34	0.993	1
TPP2	16q-Del	0.993	1
TPP2	Amp_11q14.1	0.993	1
TPP2	Amp_13q34	0.993	1
USP36	Amp_13q34	0.993	1
16p-Amp	Amp_1q44	0.993	1
20p-Amp	Amp_6p23	0.993	1
20q-Amp	7p-Amp	0.993	1
7p-Amp	Del_16q24.3	0.993	1
8p-Amp	Amp_17q23.1	0.993	1
8p-Amp	Del_10q26.3	0.993	1
8q-Amp	Amp_10q22.3	0.993	1
11p-Del	Amp_17q12	0.993	1
11q-Del	Amp_17q12	0.993	1
13q-Del	5q-Del	0.993	1
14q-Del	17q-Del	0.993	1
14q-Del	Amp_10p15.1	0.993	1
14q-Del	Del_12q23.1	0.993	1
16p-Del	Amp_8p11.23	0.993	1
17p-Del	Amp_15q26.3	0.993	1
17p-Del	Del_7q36.1	0.993	1
18q-Del	9q-Del	0.993	1
18q-Del	Del_12p13.1	0.993	1
1p-Del	Amp_17q12	0.993	1
1p-Del	Del_7q36.1	0.993	1
22q-Del	Del_12q24.31	0.993	1
5q-Del	Amp_10q22.3	0.993	1
9q-Del	Del_7p22.3	0.993	1
9q-Del	Del_11p15.5	0.993	1
Amp_1p22.3	Del_4p16.3	0.993	1
Amp_3p25.1	Del_20p13	0.993	1
Amp_3q26.32	Del_17q21.31	0.993	1
Amp_6p23	Del_10q26.3	0.993	1
Amp_6q21	Del_6p25.3	0.993	1
Amp_10p15.1	Amp_11p13	0.993	1
Amp_10q22.3	Del_5q11.2	0.993	1
Amp_11p13	Del_5q21.3	0.993	1
Amp_12p13.33	Amp_20q13.2	0.993	1
Amp_13q34	Del_20p13	0.993	1
Amp_14q21.1	Amp_17q12	0.993	1
Amp_17q23.1	Del_4q35.1	0.993	1
Amp_19q12	Del_13q14.2	0.993	1
Amp_19q13.42	Del_8p23.2	0.993	1
Amp_20q13.2	Del_9q21.11	0.993	1
Amp_20q13.2	Del_17p12	0.993	1
Del_1p22.1	Del_12p13.1	0.993	1
Del_1p22.1	Del_19q13.32	0.993	1
Del_4q35.1	Del_6q27	0.993	1
Del_6q27	Del_12q24.31	0.993	1
Del_7p22.3	Del_20p13	0.993	1
Del_9p23	Del_12p13.1	0.993	1
Del_9p23	Del_12q23.1	0.993	1
Del_12p13.1	Del_20p13	0.993	1
Del_12q24.31	Del_19q13.32	0.993	1
AARS	WSCD2	0.994	1
AARS	CASZ1	0.994	1
AARS	DLG1	0.994	1
AARS	MLL4	0.994	1
ACTL6B	8p-Del	0.994	1
AQP12A	Del_9p21.3	0.994	1
ARID1A	FBXW7	0.994	1
ARID1A	ABCA8	0.994	1
ASB10	Del_5q11.2	0.994	1
C1QTNF5	RPGR	0.994	1
C1QTNF5	TAF1L	0.994	1
C1QTNF5	ERBB3	0.994	1
CASP8	CDKN1B	0.994	1
CASP8	16p-Amp	0.994	1
CDH1	TNRC6B	0.994	1
CDKN1B	FRMPD2	0.994	1
CDKN1B	TGS1	0.994	1
CTCF	ANKRD20A4	0.994	1
ERBB2	KRAS	0.994	1
ERBB2	RB1	0.994	1
ERBB2	MLC1	0.994	1
ERBB2	CABYR	0.994	1
ERBB2	CCDC82	0.994	1
ERBB2	CEP57	0.994	1
FAM86B1	BCORL1	0.994	1
FBXW7	TCP10	0.994	1
FBXW7	GRHL2	0.994	1
FBXW7	C15orf39	0.994	1
FBXW7	NF1	0.994	1
FBXW7	TPP2	0.994	1
FBXW7	Del_12q23.1	0.994	1
GATA3	Del_9p23	0.994	1
GATA3	Del_22q13.32	0.994	1
GPS2	PTEN	0.994	1
HIST1H2BC	DOCK11	0.994	1
HIST1H3B	PTEN	0.994	1
HIST1H3B	PPEF1	0.994	1
HIST1H3B	IRS4	0.994	1
HLA-DRB5	MAP2K4	0.994	1
HLA-DRB5	HRNR	0.994	1
KRAS	PCNXL2	0.994	1
MAP2K4	16p-Amp	0.994	1
MAP3K1	TCP11	0.994	1
MLL3	AKD1	0.994	1
MLL3	ICOSLG	0.994	1
MLL3	CCDC82	0.994	1
MLL3	CEP57	0.994	1
MLL3	TCP11	0.994	1
MYB	TBL1XR1	0.994	1
NCOR1	ANGPT4	0.994	1
PIK3CA	OR4D10	0.994	1
PIK3CA	MR1	0.994	1
PIK3R1	NF1	0.994	1
PIK3R1	SLC35B2	0.994	1
PIK3R1	TPP2	0.994	1
PIWIL1	PTHLH	0.994	1
PIWIL1	SMAD2	0.994	1
PIWIL1	ATXN7L1	0.994	1
PIWIL1	CCNL2	0.994	1
PIWIL1	TFE3	0.994	1
PIWIL1	7p-Amp	0.994	1
PTHLH	TNRC6B	0.994	1
PTPN22	UBC	0.994	1
PTPN22	17q-Amp	0.994	1
PTPN22	Del_2q37.3	0.994	1
RPGR	SMAD2	0.994	1
RPGR	SMAD4	0.994	1
RPGR	ATXN7L1	0.994	1
RPGR	CCNL2	0.994	1
RPGR	OR4D10	0.994	1
RPGR	TFE3	0.994	1
SMAD2	TAF1L	0.994	1
SMAD2	ANKRD12	0.994	1
SMAD2	ERBB3	0.994	1
SMAD2	TNRC6B	0.994	1
SMAD4	ANKRD12	0.994	1
SMAD4	TNRC6B	0.994	1
SMAD4	Del_9p23	0.994	1
TAF1L	ZFP36L2	0.994	1
TAF1L	ANKRD20A4	0.994	1
TAF1L	TFE3	0.994	1
TBX3	ATXN2	0.994	1
TBX3	ZMYM3	0.994	1
TCP10	Del_12q23.1	0.994	1
THEM5	GPRIN2	0.994	1
THEM5	FGFR2	0.994	1
TP53	Del_13q14.2	0.994	1
VCPIP1	CASZ1	0.994	1
VCPIP1	MLL4	0.994	1
VCPIP1	20p-Amp	0.994	1
WSCD2	NFE2L3	0.994	1
WSCD2	EIF4A2	0.994	1
ZFP36L1	Del_1p36.13	0.994	1
ZFP36L2	ERBB3	0.994	1
ABCA8	C15orf39	0.994	1
ABCA8	SLC35B2	0.994	1
ANKRD12	CCNL2	0.994	1
ANKRD12	OR4D10	0.994	1
ATXN2	Amp_6q21	0.994	1
ATXN2	Del_5q21.3	0.994	1
ATXN7L1	ERBB3	0.994	1
CCL13	16q-Del	0.994	1
CCL13	Del_11q23.3	0.994	1
COL6A5	AKT2	0.994	1
DST	Del_12q24.31	0.994	1
ERBB3	4q-Del	0.994	1
GPRIN2	PPEF1	0.994	1
HLA-C	CASZ1	0.994	1
HLA-C	Del_5q21.3	0.994	1
HRNR	OXCT2	0.994	1
HRNR	RIBC1	0.994	1
MLC1	DOCK11	0.994	1
MORN1	BCORL1	0.994	1
NFE2L3	MLL4	0.994	1
OR4D10	TNRC6B	0.994	1
PPEF1	IRS4	0.994	1
PPEF1	ZNF687	0.994	1
PPEF1	Del_9q21.11	0.994	1
PPEF1	Del_19p13.3	0.994	1
PRICKLE3	UBC	0.994	1
UBC	ATHL1	0.994	1
UBC	16p-Amp	0.994	1
XBP1	Del_19p13.3	0.994	1
ZNF41	FGFR2	0.994	1
ZNF41	IRS4	0.994	1
ZNF41	16p-Del	0.994	1
ZNF41	4q-Del	0.994	1
ATHL1	TGS1	0.994	1
ATHL1	8p-Del	0.994	1
ATHL1	Amp_4q13.3	0.994	1
ATHL1	Amp_20q13.2	0.994	1
ATHL1	Del_2q37.3	0.994	1
BCORL1	NF1	0.994	1
BCORL1	TPP2	0.994	1
BCORL1	USP36	0.994	1
C15orf39	Amp_3q26.32	0.994	1
C15orf39	Del_5q11.2	0.994	1
C15orf39	Del_12q24.31	0.994	1
CABYR	Del_9p21.3	0.994	1
CASZ1	EIF4A2	0.994	1
CASZ1	SPEN	0.994	1
CCDC82	DOCK11	0.994	1
CCDC82	Amp_12p13.33	0.994	1
DLG1	EIF4A2	0.994	1
DLG1	SPEN	0.994	1
DOCK11	TARBP2	0.994	1
EIF4A2	MLL4	0.994	1
FGFR2	16p-Del	0.994	1
IRS4	ZNF687	0.994	1
KCNN3	MLL4	0.994	1
KCNN3	Del_5q21.3	0.994	1
KCNN3	Del_7p22.3	0.994	1
MKL1	20p-Amp	0.994	1
MUC6	Del_5q21.3	0.994	1
PAX2	Del_11p15.5	0.994	1
PAX2	Del_19p13.3	0.994	1
PCNXL2	TARBP2	0.994	1
PCNXL2	TCP11	0.994	1
RHOA	17q-Del	0.994	1
SDC1	Amp_3p25.1	0.994	1
SDC1	Amp_17q23.1	0.994	1
SLC35B2	Del_12q23.1	0.994	1
TARBP2	Amp_12p13.33	0.994	1
17q-Amp	13q-Del	0.994	1
17q-Amp	Amp_8p11.23	0.994	1
20q-Amp	11q-Del	0.994	1
20q-Amp	Amp_12p13.33	0.994	1
8q-Amp	Amp_19q12	0.994	1
8q-Amp	Del_21q11.2	0.994	1
11q-Del	Del_7q36.1	0.994	1
14q-Del	Amp_10q22.3	0.994	1
15q-Del	6q-Del	0.994	1
15q-Del	Amp_15q26.3	0.994	1
15q-Del	Del_16q24.3	0.994	1
16p-Del	Amp_15q26.3	0.994	1
17q-Del	Del_10q23.31	0.994	1
18q-Del	Amp_11q13.3	0.994	1
18q-Del	Del_15q13.1	0.994	1
1q-Del	Del_9q34.2	0.994	1
5q-Del	Del_22q13.32	0.994	1
6q-Del	Del_7p22.3	0.994	1
8p-Del	Del_9q21.11	0.994	1
Amp_1p22.3	Amp_13q34	0.994	1
Amp_1q21.3	Amp_12p13.33	0.994	1
Amp_1q21.3	Del_13q14.2	0.994	1
Amp_3p25.1	Del_9p23	0.994	1
Amp_3q26.32	Del_1p36.13	0.994	1
Amp_3q26.32	Del_19p13.3	0.994	1
Amp_6p23	Amp_11p13	0.994	1
Amp_6p23	Del_4p16.3	0.994	1
Amp_6q21	Del_12q24.31	0.994	1
Amp_8p11.21	Del_19p13.3	0.994	1
Amp_10p15.1	Amp_15q26.3	0.994	1
Amp_10q22.3	Amp_19p13.12	0.994	1
Amp_11q13.3	Del_17p12	0.994	1
Amp_11q14.1	Del_10q23.31	0.994	1
Amp_12q15	Del_13q14.2	0.994	1
Amp_13q34	Amp_19p13.12	0.994	1
Amp_14q21.1	Del_4p16.3	0.994	1
Amp_14q21.1	Del_13q14.2	0.994	1
Amp_15q26.3	Del_22q13.32	0.994	1
Amp_19q13.42	Del_4q35.1	0.994	1
Del_1p22.1	Del_2q37.3	0.994	1
Del_5q21.3	Del_21q11.2	0.994	1
Del_6q27	Del_12p13.1	0.994	1
Del_7p22.3	Del_12q24.31	0.994	1
Del_7q36.1	Del_9q34.2	0.994	1
Del_7q36.1	Del_13q14.2	0.994	1
Del_9q21.11	Del_11p15.5	0.994	1
AARS	FHOD3	0.995	1
AARS	UBC	0.995	1
AARS	TGS1	0.995	1
ACTL6B	ZNF41	0.995	1
ACTL6B	IRS4	0.995	1
APC	PTHLH	0.995	1
APC	SMAD4	0.995	1
APC	CCNL2	0.995	1
ARID1A	ZMYM3	0.995	1
ASB10	MUC6	0.995	1
C1QTNF5	PIK3R1	0.995	1
C1QTNF5	ABCA8	0.995	1
C1QTNF5	KDM6A	0.995	1
C1QTNF5	Amp_11p13	0.995	1
CASP8	SPEN	0.995	1
CBFB	EPDR1	0.995	1
CBFB	FBXO17	0.995	1
CBFB	MYH9	0.995	1
CBFB	AKT2	0.995	1
CBFB	CDC42EP1	0.995	1
CBFB	NBPF9	0.995	1
CDH1	TGS1	0.995	1
CDKN1B	HIST1H3B	0.995	1
CDKN1B	FGFR2	0.995	1
CDKN1B	IRS4	0.995	1
CTCF	MAP3K1	0.995	1
ERBB2	AKD1	0.995	1
FAM86B1	MUC6	0.995	1
FBXW7	PTHLH	0.995	1
FBXW7	MR1	0.995	1
FBXW7	TFE3	0.995	1
FOXA1	PIK3R1	0.995	1
FOXA1	FBXO17	0.995	1
HIST1H2BC	RB1	0.995	1
HIST1H3B	PTPN22	0.995	1
HIST1H3B	ANGPT4	0.995	1
HLA-DRB5	SPEN	0.995	1
KRAS	RB1	0.995	1
KRAS	AKD1	0.995	1
MAP2K4	IRS4	0.995	1
MLL3	TAF1L	0.995	1
MLL3	COL6A5	0.995	1
NCOR1	SPRR2B	0.995	1
NCOR1	SDC1	0.995	1
PIK3CA	1q-Amp	0.995	1
PIK3CA	16q-Del	0.995	1
PIK3R1	PTHLH	0.995	1
PIK3R1	SMAD2	0.995	1
PIK3R1	ATXN7L1	0.995	1
PIK3R1	CCNL2	0.995	1
PIK3R1	OR4D10	0.995	1
PIK3R1	MR1	0.995	1
PIWIL1	PCNXL2	0.995	1
PTEN	9p-Del	0.995	1
PTPN22	PPEF1	0.995	1
PTPN22	ZNF41	0.995	1
PTPN22	IRS4	0.995	1
PTPN22	Del_17q21.31	0.995	1
PTPN22	Del_18q23	0.995	1
RAB42	7q-Amp	0.995	1
RB1	CXCR3	0.995	1
RB1	TARBP2	0.995	1
RUNX1	CCL13	0.995	1
SF3B1	SMAD4	0.995	1
SF3B1	ATXN7L1	0.995	1
SF3B1	CCNL2	0.995	1
SF3B1	MR1	0.995	1
SMAD2	WDR52	0.995	1
SMAD2	KDM6A	0.995	1
SMAD4	ABCA8	0.995	1
SMAD4	MYH9	0.995	1
TAF1L	PCNXL2	0.995	1
TBX3	CASZ1	0.995	1
TBX3	Amp_1q21.3	0.995	1
TCP10	CASZ1	0.995	1
TP53	DOCK11	0.995	1
TP53	Amp_8p11.21	0.995	1
VCPIP1	FHOD3	0.995	1
VCPIP1	TGS1	0.995	1
VCPIP1	Amp_10q22.3	0.995	1
WSCD2	TPP2	0.995	1
ZFP36L2	Amp_8p11.21	0.995	1
ABCA8	ATXN7L1	0.995	1
ABCA8	COL6A5	0.995	1
ABCA8	ANKRD20A4	0.995	1
ABCA8	MR1	0.995	1
ABCA8	Del_11p15.5	0.995	1
AKD1	OR6C76	0.995	1
AKD1	CEP57	0.995	1
ATXN2	GYG2	0.995	1
ATXN2	C15orf39	0.995	1
ATXN2	NF1	0.995	1
ATXN2	SLC35B2	0.995	1
ATXN2	USP36	0.995	1
ATXN7L1	DNAH12	0.995	1
ATXN7L1	WDR52	0.995	1
ATXN7L1	Amp_11p13	0.995	1
CCL13	7q-Amp	0.995	1
CCNL2	WDR52	0.995	1
CCNL2	BCORL1	0.995	1
COL6A5	BCORL1	0.995	1
COL6A5	SPEN	0.995	1
COL6A5	17q-Del	0.995	1
DNAH12	OR4D10	0.995	1
DNAH12	ANKRD20A4	0.995	1
DNAH12	MR1	0.995	1
DNAH12	TFE3	0.995	1
DST	ZNF41	0.995	1
ERBB3	PCNXL2	0.995	1
FHOD3	HLA-C	0.995	1
FHOD3	7q-Amp	0.995	1
FHOD3	Amp_10p15.1	0.995	1
GRHL2	CASZ1	0.995	1
GYG2	MED23	0.995	1
GYG2	MLL4	0.995	1
GYG2	RBMX	0.995	1
GYG2	Del_10q26.3	0.995	1
HLA-C	Amp_19p13.12	0.995	1
HRNR	FRMPD2	0.995	1
ICOSLG	11q-Del	0.995	1
MORN1	MED23	0.995	1
NFE2L3	UBC	0.995	1
NFE2L3	TGS1	0.995	1
OR2T35	16p-Amp	0.995	1
OR4D10	WDR52	0.995	1
OR4D10	KDM6A	0.995	1
PPEF1	Del_7q36.1	0.995	1
PRICKLE3	ZNF687	0.995	1
UBC	EIF4A2	0.995	1
XBP1	SPEN	0.995	1
XBP1	20q-Amp	0.995	1
XBP1	7q-Amp	0.995	1
ANGPT4	FGFR2	0.995	1
ANGPT4	IRS4	0.995	1
ATHL1	IRS4	0.995	1
ATHL1	ZNF687	0.995	1
BCORL1	MR1	0.995	1
C15orf39	CASZ1	0.995	1
C15orf39	Del_10q26.3	0.995	1
CASZ1	PSIP1	0.995	1
DOCK11	Del_9p21.3	0.995	1
FGFR2	17q-Del	0.995	1
FRMPD2	SPEN	0.995	1
FRMPD2	Amp_1p22.3	0.995	1
KCNN3	Amp_19p13.12	0.995	1
KCNN3	Del_3p21.31	0.995	1
KCNN3	Del_9p21.3	0.995	1
MLL4	PSIP1	0.995	1
MUC6	NF1	0.995	1
MUC6	PSIP1	0.995	1
NBPF9	22q-Del	0.995	1
NBPF9	Del_2q37.3	0.995	1
NF1	ZMYM3	0.995	1
OXCT2	Del_4p16.3	0.995	1
PAX2	Del_4q35.1	0.995	1
PCNXL2	TNRC6B	0.995	1
RBMX	TPP2	0.995	1
RHBG	SPEN	0.995	1
RIBC1	16p-Amp	0.995	1
SDC1	Amp_4q13.3	0.995	1
SDC1	Amp_17q12	0.995	1
SLC35B2	ZMYM3	0.995	1
SPEN	TTPAL	0.995	1
SPEN	ZBTB7C	0.995	1
TPP2	ZMYM3	0.995	1
TPP2	Del_16q24.3	0.995	1
TTPAL	20q-Amp	0.995	1
USP36	ZMYM3	0.995	1
ZNF362	7q-Amp	0.995	1
16p-Amp	20p-Amp	0.995	1
16p-Amp	Amp_8q24.21	0.995	1
16p-Amp	Amp_12q15	0.995	1
16p-Amp	Del_22q13.32	0.995	1
17q-Amp	Amp_19q13.42	0.995	1
20p-Amp	Del_13q14.2	0.995	1
20q-Amp	Amp_19q13.42	0.995	1
5p-Amp	7q-Amp	0.995	1
5p-Amp	8q-Amp	0.995	1
8q-Amp	11q-Del	0.995	1
8q-Amp	Amp_19p13.12	0.995	1
11q-Del	Del_4p16.3	0.995	1
11q-Del	Del_5q11.2	0.995	1
13q-Del	Amp_19p13.12	0.995	1
14q-Del	Amp_11q14.1	0.995	1
15q-Del	Amp_12p13.33	0.995	1
15q-Del	Amp_19p13.12	0.995	1
15q-Del	Amp_19q12	0.995	1
16q-Del	Del_6p25.3	0.995	1
18p-Del	Amp_12p13.33	0.995	1
1q-Del	Del_17q21.31	0.995	1
1q-Del	Del_18q23	0.995	1
22q-Del	Amp_13q34	0.995	1
4p-Del	Amp_17q23.1	0.995	1
4p-Del	Amp_19q12	0.995	1
6q-Del	Del_18q23	0.995	1
9p-Del	Amp_15q26.3	0.995	1
Amp_3p25.1	Del_6p25.3	0.995	1
Amp_3q26.32	Del_14q24.1	0.995	1
Amp_4q13.3	Amp_6q21	0.995	1
Amp_4q13.3	Amp_19q13.42	0.995	1
Amp_8p11.23	Del_6q27	0.995	1
Amp_8p11.21	Amp_12q15	0.995	1
Amp_8p11.21	Del_5q11.2	0.995	1
Amp_11q13.3	Del_1p36.13	0.995	1
Amp_11q13.3	Del_1p22.1	0.995	1
Amp_11q13.3	Del_11p15.5	0.995	1
Amp_11q14.1	Del_13q14.2	0.995	1
Amp_11q14.1	Del_19p13.3	0.995	1
Amp_13q34	Amp_14q21.1	0.995	1
Amp_15q26.3	Del_8p23.2	0.995	1
Amp_19p13.12	Del_3p21.31	0.995	1
Amp_19p13.12	Del_20p13	0.995	1
Del_1p22.1	Del_6q27	0.995	1
Del_4p16.3	Del_7p22.3	0.995	1
Del_4p16.3	Del_9q21.11	0.995	1
Del_6p25.3	Del_17q21.31	0.995	1
Del_6q27	Del_10q23.31	0.995	1
Del_14q24.1	Del_21q11.2	0.995	1
AARS	PPEF1	0.996	1
AARS	IRS4	0.996	1
ACTL6B	PRICKLE3	0.996	1
ACTL6B	1q-Del	0.996	1
ACTL6B	Amp_19q12	0.996	1
APC	ERBB2	0.996	1
APC	KRAS	0.996	1
APC	ICOSLG	0.996	1
APC	OR6C76	0.996	1
APC	CABYR	0.996	1
APC	RHOA	0.996	1
APC	TARBP2	0.996	1
AQP12A	ERBB3	0.996	1
ARID1A	HLA-DRB5	0.996	1
ARID1A	WSCD2	0.996	1
ARID1A	XBP1	0.996	1
ARID1A	CASZ1	0.996	1
ARID1A	MLL4	0.996	1
ARID1A	NF1	0.996	1
ARID1A	PAX2	0.996	1
ARID1A	RHBG	0.996	1
ARID1A	TTPAL	0.996	1
ASB10	8p-Amp	0.996	1
C1QTNF5	TP53	0.996	1
C1QTNF5	Amp_14q21.1	0.996	1
CASP8	GYG2	0.996	1
CASP8	SLC35B2	0.996	1
CASP8	Amp_1q44	0.996	1
CBFB	Del_7q36.1	0.996	1
CDKN1B	PTPN22	0.996	1
CDKN1B	TBL1XR1	0.996	1
EPDR1	RB1	0.996	1
ERBB2	DNAH12	0.996	1
ERBB2	ERBB3	0.996	1
ERBB2	SHISA4	0.996	1
ERBB2	WDR52	0.996	1
ERBB2	CDC42EP1	0.996	1
ERBB2	TNRC6B	0.996	1
FAM20C	GATA3	0.996	1
FAM20C	Amp_10p15.1	0.996	1
FOXA1	MAP3K1	0.996	1
GATA3	RIBC1	0.996	1
GPS2	HLA-C	0.996	1
GPS2	NFE2L3	0.996	1
KRAS	RPGR	0.996	1
KRAS	TAF1L	0.996	1
KRAS	ANKRD12	0.996	1
KRAS	DNAH12	0.996	1
KRAS	WDR52	0.996	1
MAP3K1	TBL1XR1	0.996	1
MYB	TBX3	0.996	1
MYB	SLC35B2	0.996	1
NCOR1	PIK3CA	0.996	1
NCOR1	TAF1L	0.996	1
NCOR1	EIF4A2	0.996	1
PIK3CA	SHISA4	0.996	1
PIK3R1	Del_7p22.3	0.996	1
PIWIL1	OR6C76	0.996	1
PIWIL1	TARBP2	0.996	1
PIWIL1	Amp_4q13.3	0.996	1
PTEN	TBL1XR1	0.996	1
PTEN	SPRR2B	0.996	1
PTHLH	RBMX	0.996	1
PTPN22	ATHL1	0.996	1
RAB42	Amp_10p15.1	0.996	1
RB1	RPGR	0.996	1
RB1	TAF1L	0.996	1
RB1	AKT2	0.996	1
RB1	CDC42EP1	0.996	1
RPGR	TARBP2	0.996	1
SF3B1	OR6C76	0.996	1
SMAD2	RBMX	0.996	1
SMAD2	ZMYM3	0.996	1
SMAD2	Del_15q13.1	0.996	1
SMAD2	Del_17p12	0.996	1
SMAD4	ATXN2	0.996	1
SMAD4	MUC6	0.996	1
SMAD4	Amp_14q21.1	0.996	1
TAF1L	OR6C76	0.996	1
TAF1L	CCDC82	0.996	1
TAF1L	CEP57	0.996	1
TBX3	XBP1	0.996	1
TBX3	PAX2	0.996	1
TCP10	Del_6q15	0.996	1
THEM5	7q-Amp	0.996	1
TP53	KCNN3	0.996	1
TP53	Amp_3p25.1	0.996	1
VCPIP1	GPRIN2	0.996	1
VCPIP1	PPEF1	0.996	1
VCPIP1	17q-Amp	0.996	1
VCPIP1	Amp_4q13.3	0.996	1
ZFP36L1	FGFR2	0.996	1
ANKRD12	CCDC82	0.996	1
ANKRD12	CEP57	0.996	1
ANKRD12	DOCK11	0.996	1
ANKRD12	RHOA	0.996	1
ANKRD12	TARBP2	0.996	1
ANKRD12	TCP11	0.996	1
ATXN2	ATXN7L1	0.996	1
ATXN7L1	MUC6	0.996	1
ATXN7L1	RBMX	0.996	1
ATXN7L1	Del_12q24.31	0.996	1
ATXN7L1	Del_15q13.1	0.996	1
CCNL2	MED23	0.996	1
CCNL2	Del_12q24.31	0.996	1
COL6A5	MUC6	0.996	1
COL6A5	RBMX	0.996	1
COL6A5	ZMYM3	0.996	1
DLX6	DOCK11	0.996	1
DLX6	Amp_17q12	0.996	1
DNAH12	CEP57	0.996	1
DNAH12	RHOA	0.996	1
DNAH12	TARBP2	0.996	1
DST	SPRR2B	0.996	1
DST	9p-Del	0.996	1
ERBB3	MLC1	0.996	1
ERBB3	OR6C76	0.996	1
ERBB3	CABYR	0.996	1
ERBB3	TCP11	0.996	1
FBXO17	PCNXL2	0.996	1
FHOD3	C15orf39	0.996	1
FHOD3	PSIP1	0.996	1
FXYD5	PCNXL2	0.996	1
GPRIN2	HLA-C	0.996	1
GYG2	UBC	0.996	1
GYG2	FRMPD2	0.996	1
GYG2	TGS1	0.996	1
HLA-C	PPEF1	0.996	1
HLA-C	IRS4	0.996	1
HLA-C	ZNF687	0.996	1
HRNR	ZNF41	0.996	1
ICOSLG	TNRC6B	0.996	1
MORN1	UBC	0.996	1
MORN1	FRMPD2	0.996	1
MORN1	TGS1	0.996	1
MYH9	OR6C76	0.996	1
MYH9	TCP11	0.996	1
NFE2L3	PPEF1	0.996	1
NFE2L3	17q-Amp	0.996	1
OR4D10	RBMX	0.996	1
OR4D10	ZMYM3	0.996	1
OR4D10	Amp_11q14.1	0.996	1
OR6C76	WDR52	0.996	1
OR6C76	KDM6A	0.996	1
PPEF1	EIF4A2	0.996	1
PPEF1	20q-Amp	0.996	1
SHISA4	PCNXL2	0.996	1
SPRR2B	16p-Del	0.996	1
UBC	PSIP1	0.996	1
UBC	TPP2	0.996	1
UBC	USP36	0.996	1
WDR52	CCDC82	0.996	1
WDR52	CXCR3	0.996	1
WDR52	DOCK11	0.996	1
WDR52	RHOA	0.996	1
WDR52	TARBP2	0.996	1
WDR52	TCP11	0.996	1
XBP1	NF1	0.996	1
ZNF41	Del_4p16.3	0.996	1
ATHL1	Del_9q21.11	0.996	1
C15orf39	FRMPD2	0.996	1
C15orf39	TGS1	0.996	1
C15orf39	Del_7p22.3	0.996	1
CABYR	TNRC6B	0.996	1
CCDC82	KDM6A	0.996	1
CCDC82	TNRC6B	0.996	1
CEP57	TNRC6B	0.996	1
DLG1	20p-Amp	0.996	1
EIF4A2	IRS4	0.996	1
FGFR2	KCNN3	0.996	1
FGFR2	Del_17p12	0.996	1
FRMPD2	TPP2	0.996	1
IRS4	SPEN	0.996	1
KDM6A	RHOA	0.996	1
KDM6A	TCP11	0.996	1
MED23	TFE3	0.996	1
MKL1	PCNXL2	0.996	1
MLL4	NF1	0.996	1
MR1	MUC6	0.996	1
MR1	RBMX	0.996	1
NF1	RIBC1	0.996	1
NF1	ZBTB7C	0.996	1
PAX2	9p-Del	0.996	1
RHBG	Amp_10p15.1	0.996	1
RHBG	Del_10q26.3	0.996	1
RHOA	TNRC6B	0.996	1
SLC35B2	Del_7p22.3	0.996	1
TCP11	TNRC6B	0.996	1
TFE3	ZMYM3	0.996	1
TGS1	Amp_1q44	0.996	1
TNRC6B	Amp_1q44	0.996	1
TTPAL	Amp_10p15.1	0.996	1
USP36	13q-Del	0.996	1
16p-Amp	20q-Amp	0.996	1
16p-Amp	7q-Amp	0.996	1
17q-Amp	Amp_11q13.3	0.996	1
5p-Amp	Amp_12p13.33	0.996	1
7p-Amp	Del_9p21.3	0.996	1
8q-Amp	5q-Del	0.996	1
8q-Amp	Del_5q11.2	0.996	1
11p-Del	Del_19p13.3	0.996	1
11q-Del	Del_5q21.3	0.996	1
11q-Del	Del_19q13.32	0.996	1
13q-Del	Del_12q23.1	0.996	1
14q-Del	1q-Del	0.996	1
14q-Del	Amp_6q21	0.996	1
15q-Del	Amp_10p15.1	0.996	1
15q-Del	Del_7q36.1	0.996	1
17q-Del	Amp_8q24.21	0.996	1
17q-Del	Del_1p22.1	0.996	1
17q-Del	Del_6q15	0.996	1
17q-Del	Del_12p13.1	0.996	1
18p-Del	Amp_11q14.1	0.996	1
18q-Del	Del_7q36.1	0.996	1
18q-Del	Del_11p15.5	0.996	1
1p-Del	Amp_8p11.23	0.996	1
1q-Del	Amp_12p13.33	0.996	1
1q-Del	Del_8p23.2	0.996	1
1q-Del	Del_19p13.3	0.996	1
22q-Del	Del_10q23.31	0.996	1
5q-Del	Amp_3q26.32	0.996	1
5q-Del	Del_6q27	0.996	1
6q-Del	8p-Del	0.996	1
9p-Del	Amp_8q24.21	0.996	1
Amp_1p22.3	Del_14q24.1	0.996	1
Amp_1q21.3	Amp_3q26.32	0.996	1
Amp_3p25.1	Del_1p36.13	0.996	1
Amp_3p25.1	Del_8p23.2	0.996	1
Amp_3p25.1	Del_19q13.32	0.996	1
Amp_3q26.32	Del_12q23.1	0.996	1
Amp_4q13.3	Amp_8q24.21	0.996	1
Amp_6p23	Del_7q36.1	0.996	1
Amp_6q21	Amp_8q24.21	0.996	1
Amp_6q21	Amp_19q12	0.996	1
Amp_8p11.23	Amp_14q21.1	0.996	1
Amp_8p11.23	Del_20p13	0.996	1
Amp_8p11.21	Amp_11q14.1	0.996	1
Amp_8p11.21	Del_5q21.3	0.996	1
Amp_8q24.21	Del_4p16.3	0.996	1
Amp_8q24.21	Del_6q27	0.996	1
Amp_8q24.21	Del_9p21.3	0.996	1
Amp_10p15.1	Amp_14q21.1	0.996	1
Amp_11p13	Del_5q11.2	0.996	1
Amp_11p13	Del_19p13.3	0.996	1
Amp_11q14.1	Del_9p21.3	0.996	1
Amp_11q14.1	Del_11p15.5	0.996	1
Amp_12p13.33	Del_13q14.2	0.996	1
Amp_12p13.33	Del_19q13.32	0.996	1
Amp_12q15	Amp_17q23.1	0.996	1
Amp_13q34	Del_12q23.1	0.996	1
Amp_15q26.3	Del_5q11.2	0.996	1
Amp_19p13.12	Del_12q24.31	0.996	1
Amp_19q13.42	Del_9q21.11	0.996	1
Del_1p22.1	Del_4q35.1	0.996	1
Del_1p22.1	Del_15q13.1	0.996	1
Del_6p25.3	Del_7q36.1	0.996	1
Del_6p25.3	Del_8p23.2	0.996	1
Del_6q15	Del_12p13.1	0.996	1
Del_9p23	Del_21q11.2	0.996	1
Del_9p21.3	Del_12q23.1	0.996	1
Del_9q21.11	Del_12p13.1	0.996	1
Del_12q23.1	Del_16q24.3	0.996	1
Del_18q23	Del_19q13.32	0.996	1
AARS	PTPN22	0.997	1
AARS	NFE2L3	0.997	1
AARS	ANGPT4	0.997	1
AARS	ATHL1	0.997	1
AARS	Del_12p13.1	0.997	1
APC	FBXO17	0.997	1
APC	SHISA4	0.997	1
AQP12A	PIK3R1	0.997	1
AQP12A	MUC6	0.997	1
AQP12A	Del_18q23	0.997	1
ARID1A	TGS1	0.997	1
ASB10	Del_5q21.3	0.997	1
C1QTNF5	CASP8	0.997	1
C1QTNF5	MYB	0.997	1
CASP8	CCNL2	0.997	1
CBFB	CCL13	0.997	1
CBFB	OXCT2	0.997	1
CBFB	RIBC1	0.997	1
CDH1	SMAD2	0.997	1
CDKN1B	MLL3	0.997	1
CDKN1B	VCPIP1	0.997	1
CDKN1B	HLA-C	0.997	1
CDKN1B	MORN1	0.997	1
CDKN1B	EIF4A2	0.997	1
CDKN1B	SLC35B2	0.997	1
CDKN1B	SPEN	0.997	1
EPDR1	RPGR	0.997	1
EPDR1	ANKRD12	0.997	1
EPDR1	WDR52	0.997	1
ERBB2	FBXW7	0.997	1
FAM86B1	1q-Del	0.997	1
FBXW7	KRAS	0.997	1
FBXW7	OR6C76	0.997	1
FBXW7	PCNXL2	0.997	1
FOXA1	XBP1	0.997	1
FOXA1	CASZ1	0.997	1
FOXA1	RHBG	0.997	1
GATA3	NCOR1	0.997	1
GPS2	TCP10	0.997	1
GPS2	GYG2	0.997	1
GPS2	TPP2	0.997	1
GPS2	Del_16q24.3	0.997	1
HIST1H3B	MORN1	0.997	1
HIST1H3B	SLC35B2	0.997	1
HLA-DRB5	PCNXL2	0.997	1
KRAS	PIK3R1	0.997	1
KRAS	RBMX	0.997	1
KRAS	ZMYM3	0.997	1
MAP2K4	SPRR2B	0.997	1
MAP2K4	17p-Del	0.997	1
MAP3K1	NBPF9	0.997	1
MAP3K1	PCNXL2	0.997	1
MAP3K1	Amp_8p11.21	0.997	1
MLL3	PTPN22	0.997	1
MLL3	WDR52	0.997	1
MLL3	ANGPT4	0.997	1
MLL3	CDC42EP1	0.997	1
MLL3	KDM6A	0.997	1
MLL3	MKL1	0.997	1
MYB	MR1	0.997	1
NCOR1	GRHL2	0.997	1
PIK3CA	ATXN2	0.997	1
PIK3CA	ANGPT4	0.997	1
PIK3CA	MED23	0.997	1
PIK3R1	RB1	0.997	1
PIK3R1	ICOSLG	0.997	1
PIK3R1	MLC1	0.997	1
PIK3R1	CCDC82	0.997	1
PIK3R1	DOCK11	0.997	1
PIK3R1	17q-Del	0.997	1
PIK3R1	Amp_12q15	0.997	1
PIWIL1	AKD1	0.997	1
PIWIL1	FBXO17	0.997	1
PIWIL1	MKL1	0.997	1
PTEN	TAF1L	0.997	1
PTEN	AKD1	0.997	1
PTHLH	FHOD3	0.997	1
PTHLH	7p-Amp	0.997	1
PTPN22	GYG2	0.997	1
PTPN22	MORN1	0.997	1
PTPN22	C15orf39	0.997	1
PTPN22	EIF4A2	0.997	1
PTPN22	PSIP1	0.997	1
PTPN22	TPP2	0.997	1
PTPN22	Amp_12q15	0.997	1
PTPN22	Amp_17q12	0.997	1
PTPN22	Del_4q35.1	0.997	1
RB1	TP53	0.997	1
RB1	DNAH12	0.997	1
RPGR	AKD1	0.997	1
RPGR	FBXO17	0.997	1
SF3B1	AKD1	0.997	1
SF3B1	Del_10q23.31	0.997	1
SF3B1	Del_10q26.3	0.997	1
SMAD2	FHOD3	0.997	1
SMAD2	FRMPD2	0.997	1
SMAD4	UBC	0.997	1
SMAD4	CASZ1	0.997	1
TAF1L	DLX6	0.997	1
TAF1L	ERBB3	0.997	1
TAF1L	FBXO17	0.997	1
TAF1L	AKT2	0.997	1
TAF1L	CDC42EP1	0.997	1
TAF1L	Del_17q21.31	0.997	1
TBL1XR1	GRHL2	0.997	1
TBL1XR1	EIF4A2	0.997	1
TBX3	ZNF41	0.997	1
TBX3	FGFR2	0.997	1
TCP10	8q-Amp	0.997	1
TCP10	Amp_6p23	0.997	1
THEM5	NF1	0.997	1
TP53	Amp_1p22.3	0.997	1
VCPIP1	ANGPT4	0.997	1
ZFP36L1	ANGPT4	0.997	1
ZFP36L1	ATHL1	0.997	1
ZFP36L2	FRMPD2	0.997	1
ABCA8	ICOSLG	0.997	1
ABCA8	CCDC82	0.997	1
ABCA8	DOCK11	0.997	1
ABCA8	PCNXL2	0.997	1
ABCA8	Amp_12q15	0.997	1
AKD1	DST	0.997	1
AKD1	FBXO17	0.997	1
AKD1	MYH9	0.997	1
AKD1	CDC42EP1	0.997	1
AKD1	NBPF9	0.997	1
AKD1	TNRC6B	0.997	1
ANKRD12	FXYD5	0.997	1
ANKRD12	CDC42EP1	0.997	1
ANKRD12	MKL1	0.997	1
ATXN2	OR6C76	0.997	1
ATXN2	CCDC82	0.997	1
ATXN2	CEP57	0.997	1
ATXN2	PCNXL2	0.997	1
ATXN2	Del_7p22.3	0.997	1
ATXN7L1	FHOD3	0.997	1
ATXN7L1	UBC	0.997	1
ATXN7L1	CASZ1	0.997	1
ATXN7L1	FRMPD2	0.997	1
ATXN7L1	MLL4	0.997	1
ATXN7L1	TGS1	0.997	1
CCNL2	FHOD3	0.997	1
CCNL2	UBC	0.997	1
CCNL2	CASZ1	0.997	1
CCNL2	1q-Amp	0.997	1
CCNL2	Amp_1p22.3	0.997	1
COL6A5	UBC	0.997	1
COL6A5	XBP1	0.997	1
COL6A5	TGS1	0.997	1
DLX6	15q-Del	0.997	1
DLX6	Del_21q11.2	0.997	1
DNAH12	CDC42EP1	0.997	1
DST	HLA-C	0.997	1
ERBB3	FBXO17	0.997	1
ERBB3	FXYD5	0.997	1
ERBB3	MKL1	0.997	1
FBXO17	WDR52	0.997	1
FBXO17	KDM6A	0.997	1
FHOD3	OR4D10	0.997	1
FXYD5	KDM6A	0.997	1
FXYD5	TNRC6B	0.997	1
GPRIN2	GRHL2	0.997	1
GPRIN2	GYG2	0.997	1
GPRIN2	TPP2	0.997	1
GRHL2	PPEF1	0.997	1
GYG2	PPEF1	0.997	1
GYG2	ATHL1	0.997	1
GYG2	17q-Amp	0.997	1
GYG2	Amp_6p23	0.997	1
HLA-C	ATHL1	0.997	1
HRNR	SPRR2B	0.997	1
HRNR	DOCK11	0.997	1
MLC1	Amp_11p13	0.997	1
MORN1	PPEF1	0.997	1
MORN1	PRICKLE3	0.997	1
MYH9	AKT2	0.997	1
NFE2L3	ATHL1	0.997	1
NFE2L3	EIF4A2	0.997	1
NFE2L3	KCNN3	0.997	1
OR2T35	8q-Amp	0.997	1
OR4D10	CASZ1	0.997	1
OR4D10	FRMPD2	0.997	1
PPEF1	NF1	0.997	1
PPEF1	PSIP1	0.997	1
PPEF1	TPP2	0.997	1
PPEF1	Del_10q26.3	0.997	1
PRICKLE3	EIF4A2	0.997	1
PRICKLE3	USP36	0.997	1
SHISA4	KDM6A	0.997	1
SHISA4	TNRC6B	0.997	1
SPRR2B	SPEN	0.997	1
UBC	NF1	0.997	1
WDR52	MKL1	0.997	1
WDR52	Amp_4q13.3	0.997	1
XBP1	PCNXL2	0.997	1
ZNF41	NF1	0.997	1
ZNF41	PSIP1	0.997	1
ZNF41	TPP2	0.997	1
AKT2	KDM6A	0.997	1
AKT2	TNRC6B	0.997	1
ANGPT4	SPEN	0.997	1
ATHL1	EIF4A2	0.997	1
ATHL1	PSIP1	0.997	1
ATHL1	Del_15q13.1	0.997	1
BCORL1	RHOA	0.997	1
C15orf39	ZNF687	0.997	1
C15orf39	Amp_6p23	0.997	1
CABYR	5p-Amp	0.997	1
CCDC82	ZMYM3	0.997	1
CDC42EP1	TNRC6B	0.997	1
CDC42EP1	Amp_19q12	0.997	1
CDC42EP1	Del_21q11.2	0.997	1
CXCR3	Amp_11p13	0.997	1
CXCR3	Amp_13q34	0.997	1
DLG1	MR1	0.997	1
DLG1	Amp_6p23	0.997	1
DOCK11	Del_12p13.1	0.997	1
EIF4A2	Del_12p13.1	0.997	1
FGFR2	SLC35B2	0.997	1
FGFR2	TPP2	0.997	1
FRMPD2	MR1	0.997	1
FRMPD2	NF1	0.997	1
IRS4	SLC35B2	0.997	1
KCNN3	1q-Del	0.997	1
KCNN3	Del_12p13.1	0.997	1
KDM6A	MKL1	0.997	1
MED23	Del_6q15	0.997	1
MED23	Del_6q27	0.997	1
MKL1	TNRC6B	0.997	1
MKL1	Amp_12q15	0.997	1
MKL1	Del_7q36.1	0.997	1
MR1	TGS1	0.997	1
MUC6	PCNXL2	0.997	1
MUC6	Del_19q13.32	0.997	1
NF1	ZNF687	0.997	1
PAX2	17p-Del	0.997	1
PCNXL2	RBMX	0.997	1
PCNXL2	RHBG	0.997	1
PCNXL2	ZMYM3	0.997	1
RHOA	Del_18q23	0.997	1
TCP11	Amp_8p11.23	0.997	1
TFE3	TGS1	0.997	1
TTPAL	20p-Amp	0.997	1
USP36	ZNF687	0.997	1
USP36	Del_13q14.2	0.997	1
ZNF687	Amp_15q26.3	0.997	1
ZNF687	Del_10q26.3	0.997	1
17q-Amp	1q-Amp	0.997	1
17q-Amp	8p-Amp	0.997	1
1q-Amp	5p-Amp	0.997	1
20p-Amp	Amp_12p13.33	0.997	1
20p-Amp	Amp_19q13.42	0.997	1
20q-Amp	9q-Del	0.997	1
5p-Amp	Amp_8p11.21	0.997	1
5p-Amp	Amp_20q13.2	0.997	1
7p-Amp	Amp_19q13.42	0.997	1
8p-Amp	Amp_10q22.3	0.997	1
11p-Del	16q-Del	0.997	1
11p-Del	Del_18q23	0.997	1
15q-Del	17p-Del	0.997	1
15q-Del	9q-Del	0.997	1
15q-Del	Del_10q23.31	0.997	1
15q-Del	Del_20p13	0.997	1
16p-Del	Amp_19q12	0.997	1
16p-Del	Del_6q15	0.997	1
16q-Del	Del_3p21.31	0.997	1
16q-Del	Del_8p23.2	0.997	1
18p-Del	Del_10q26.3	0.997	1
18p-Del	Del_15q13.1	0.997	1
1p-Del	4q-Del	0.997	1
1p-Del	Del_9p23	0.997	1
1q-Del	9q-Del	0.997	1
1q-Del	Del_4q35.1	0.997	1
1q-Del	Del_14q24.1	0.997	1
4q-Del	Amp_11q14.1	0.997	1
4q-Del	Amp_15q26.3	0.997	1
4q-Del	Del_7p22.3	0.997	1
4q-Del	Del_7q36.1	0.997	1
5q-Del	Amp_6p23	0.997	1
5q-Del	Del_7p22.3	0.997	1
6q-Del	Amp_8p11.23	0.997	1
8p-Del	Del_7p22.3	0.997	1
Amp_3p25.1	Amp_20q13.2	0.997	1
Amp_3p25.1	Del_18q23	0.997	1
Amp_3p25.1	Del_21q11.2	0.997	1
Amp_3q26.32	Amp_11p13	0.997	1
Amp_4q13.3	Amp_14q21.1	0.997	1
Amp_4q13.3	Del_8p23.2	0.997	1
Amp_4q13.3	Del_15q13.1	0.997	1
Amp_6p23	Amp_14q21.1	0.997	1
Amp_6q21	Amp_11p13	0.997	1
Amp_6q21	Del_11p15.5	0.997	1
Amp_6q21	Del_14q24.1	0.997	1
Amp_6q21	Del_20p13	0.997	1
Amp_8p11.21	Del_20p13	0.997	1
Amp_8q24.21	Del_17p12	0.997	1
Amp_10q22.3	Amp_20q13.2	0.997	1
Amp_11p13	Del_11q23.3	0.997	1
Amp_11p13	Del_17q21.31	0.997	1
Amp_11q13.3	Del_9q21.11	0.997	1
Amp_11q13.3	Del_16q24.3	0.997	1
Amp_11q14.1	Amp_17q12	0.997	1
Amp_11q14.1	Del_9q34.2	0.997	1
Amp_11q14.1	Del_18q23	0.997	1
Amp_12q15	Del_9p23	0.997	1
Amp_12q15	Del_9p21.3	0.997	1
Amp_17q12	Del_11q23.3	0.997	1
Amp_19p13.12	Del_5q21.3	0.997	1
Amp_19p13.12	Del_12p13.1	0.997	1
Amp_19q12	Del_9q21.11	0.997	1
Amp_20q13.2	Del_1p36.13	0.997	1
Del_4q35.1	Del_9p23	0.997	1
Del_5q11.2	Del_9p23	0.997	1
Del_6q15	Del_7q36.1	0.997	1
Del_6q27	Del_17q21.31	0.997	1
Del_7p22.3	Del_9p21.3	0.997	1
Del_9p21.3	Del_12p13.1	0.997	1
Del_10q23.31	Del_22q13.32	0.997	1
AARS	MLL3	0.998	1
AARS	PTHLH	0.998	1
AARS	SMAD2	0.998	1
AARS	SMAD4	0.998	1
AARS	CCNL2	0.998	1
AARS	GYG2	0.998	1
AARS	OR4D10	0.998	1
AARS	MR1	0.998	1
AARS	PSIP1	0.998	1
AARS	SPEN	0.998	1
AARS	TFE3	0.998	1
ACTL6B	17p-Del	0.998	1
ACTL6B	Amp_8q24.21	0.998	1
APC	HLA-DRB5	0.998	1
APC	PIK3R1	0.998	1
APC	TAF1L	0.998	1
APC	ERBB3	0.998	1
APC	XBP1	0.998	1
APC	TNRC6B	0.998	1
APC	ZNF362	0.998	1
AQP12A	GPS2	0.998	1
AQP12A	CASZ1	0.998	1
AQP12A	FRMPD2	0.998	1
AQP12A	7p-Amp	0.998	1
AQP12A	Amp_11q13.3	0.998	1
AQP12A	Amp_20q13.2	0.998	1
AQP12A	Del_22q13.32	0.998	1
ARID1A	DST	0.998	1
ARID1A	PCNXL2	0.998	1
ASB10	FAM86B1	0.998	1
ASB10	TCP10	0.998	1
C1QTNF5	CDKN1B	0.998	1
C1QTNF5	FGFR2	0.998	1
CASP8	OR6C76	0.998	1
CASP8	CCDC82	0.998	1
CASP8	CEP57	0.998	1
CBFB	ZNF41	0.998	1
CDH1	PTEN	0.998	1
CDH1	RUNX1	0.998	1
CDH1	ICOSLG	0.998	1
CDH1	Del_16q24.3	0.998	1
CDKN1B	SMAD4	0.998	1
EPDR1	DLG1	0.998	1
ERBB2	HLA-DRB5	0.998	1
ERBB2	FHOD3	0.998	1
ERBB2	CASZ1	0.998	1
ERBB2	MED23	0.998	1
ERBB2	NF1	0.998	1
FAM20C	RB1	0.998	1
FAM20C	WDR52	0.998	1
FAM86B1	TCP10	0.998	1
FAM86B1	KCNN3	0.998	1
FAM86B1	Del_12p13.1	0.998	1
FBXW7	ANKRD12	0.998	1
FBXW7	DNAH12	0.998	1
FBXW7	SHISA4	0.998	1
FOXA1	MYB	0.998	1
GATA3	22q-Del	0.998	1
GATA3	Del_9p21.3	0.998	1
GATA3	Del_9q21.11	0.998	1
GPS2	MR1	0.998	1
HIST1H2BC	WSCD2	0.998	1
HIST1H3B	SMAD4	0.998	1
HIST1H3B	CCNL2	0.998	1
HIST1H3B	OR4D10	0.998	1
HIST1H3B	CCDC82	0.998	1
HIST1H3B	CEP57	0.998	1
HIST1H3B	RHOA	0.998	1
HIST1H3B	TCP11	0.998	1
HIST1H3B	Del_3p21.31	0.998	1
HLA-DRB5	PIWIL1	0.998	1
HLA-DRB5	KDM6A	0.998	1
KRAS	THEM5	0.998	1
KRAS	GPRIN2	0.998	1
KRAS	ZNF41	0.998	1
KRAS	CASZ1	0.998	1
KRAS	FGFR2	0.998	1
KRAS	FRMPD2	0.998	1
MAP2K4	MORN1	0.998	1
MAP3K1	ZFP36L1	0.998	1
MLL3	20p-Amp	0.998	1
NCOR1	ATXN2	0.998	1
NCOR1	CCNL2	0.998	1
NCOR1	DST	0.998	1
NCOR1	MR1	0.998	1
NCOR1	TFE3	0.998	1
PIK3CA	NF1	0.998	1
PIK3R1	AKD1	0.998	1
PIK3R1	DNAH12	0.998	1
PIK3R1	ERBB3	0.998	1
PIK3R1	MYH9	0.998	1
PIK3R1	MKL1	0.998	1
PIK3R1	TNRC6B	0.998	1
PIWIL1	XBP1	0.998	1
PIWIL1	KDM6A	0.998	1
PIWIL1	RHBG	0.998	1
PIWIL1	RIBC1	0.998	1
PIWIL1	ZNF362	0.998	1
PTEN	NF1	0.998	1
PTHLH	NFE2L3	0.998	1
PTHLH	ANGPT4	0.998	1
PTHLH	IRS4	0.998	1
PTHLH	16p-Del	0.998	1
PTHLH	18p-Del	0.998	1
PTPN22	ATXN7L1	0.998	1
PTPN22	20q-Amp	0.998	1
RB1	OR2T35	0.998	1
RB1	CASZ1	0.998	1
RB1	RIBC1	0.998	1
RPGR	XBP1	0.998	1
RPGR	KDM6A	0.998	1
RPGR	RHBG	0.998	1
RPGR	RIBC1	0.998	1
RPGR	TTPAL	0.998	1
RPGR	ZNF362	0.998	1
SF3B1	XBP1	0.998	1
SF3B1	RHBG	0.998	1
SMAD2	VCPIP1	0.998	1
SMAD2	GPRIN2	0.998	1
SMAD2	PPEF1	0.998	1
SMAD2	ZNF41	0.998	1
SMAD2	ANGPT4	0.998	1
SMAD2	FGFR2	0.998	1
SMAD2	IRS4	0.998	1
SMAD4	THEM5	0.998	1
SMAD4	VCPIP1	0.998	1
SMAD4	NFE2L3	0.998	1
SMAD4	PPEF1	0.998	1
SMAD4	ANGPT4	0.998	1
SMAD4	ATHL1	0.998	1
SMAD4	EIF4A2	0.998	1
SMAD4	FGFR2	0.998	1
SMAD4	18q-Del	0.998	1
TAF1L	ABCA8	0.998	1
TAF1L	DNAH12	0.998	1
TAF1L	MYH9	0.998	1
TAF1L	WDR52	0.998	1
TAF1L	KDM6A	0.998	1
TAF1L	OXCT2	0.998	1
TAF1L	RHBG	0.998	1
TAF1L	RIBC1	0.998	1
TAF1L	ZBTB7C	0.998	1
TBX3	SPRR2B	0.998	1
TCP10	GYG2	0.998	1
TCP10	HLA-C	0.998	1
THEM5	ZFP36L2	0.998	1
THEM5	OR4D10	0.998	1
THEM5	MR1	0.998	1
THEM5	RHOA	0.998	1
TP53	Amp_19q13.42	0.998	1
TP53	Del_2q37.3	0.998	1
VCPIP1	ZFP36L2	0.998	1
VCPIP1	CCNL2	0.998	1
VCPIP1	GRHL2	0.998	1
VCPIP1	MORN1	0.998	1
VCPIP1	OR4D10	0.998	1
VCPIP1	SPEN	0.998	1
VCPIP1	TPP2	0.998	1
WSCD2	MLC1	0.998	1
WSCD2	OR6C76	0.998	1
WSCD2	MKL1	0.998	1
WSCD2	TCP11	0.998	1
ZFP36L1	14q-Del	0.998	1
ZFP36L1	Del_9q21.11	0.998	1
ZFP36L1	Del_14q24.1	0.998	1
ZFP36L1	Del_16q24.3	0.998	1
ZFP36L1	Del_20p13	0.998	1
ZFP36L2	ANGPT4	0.998	1
ZFP36L2	Amp_10q22.3	0.998	1
ABCA8	WDR52	0.998	1
ABCA8	KDM6A	0.998	1
ABCA8	TNRC6B	0.998	1
AKD1	ATXN2	0.998	1
AKD1	XBP1	0.998	1
AKD1	RBMX	0.998	1
AKD1	RIBC1	0.998	1
AKD1	ZBTB7C	0.998	1
ANKRD12	WDR52	0.998	1
ANKRD12	BCORL1	0.998	1
ANKRD12	RIBC1	0.998	1
ANKRD12	TTPAL	0.998	1
ATXN2	FBXO17	0.998	1
ATXN2	CDC42EP1	0.998	1
ATXN7L1	HLA-C	0.998	1
ATXN7L1	NFE2L3	0.998	1
ATXN7L1	ANGPT4	0.998	1
ATXN7L1	ZNF687	0.998	1
ATXN7L1	17q-Amp	0.998	1
CCL13	ERBB3	0.998	1
CCL13	DOCK11	0.998	1
CCL13	Amp_8p11.23	0.998	1
CCL13	Amp_8p11.21	0.998	1
CCNL2	NFE2L3	0.998	1
CCNL2	PPEF1	0.998	1
CCNL2	ATHL1	0.998	1
CCNL2	IRS4	0.998	1
COL6A5	PPEF1	0.998	1
COL6A5	SPRR2B	0.998	1
COL6A5	ZNF41	0.998	1
COL6A5	FGFR2	0.998	1
COL6A5	Del_17q21.31	0.998	1
DLX6	MLL4	0.998	1
DLX6	RBMX	0.998	1
DLX6	5q-Del	0.998	1
DLX6	Del_3p21.31	0.998	1
DNAH12	MYH9	0.998	1
DNAH12	RHBG	0.998	1
DNAH12	RIBC1	0.998	1
DNAH12	TNRC6B	0.998	1
DNAH12	ZBTB7C	0.998	1
DST	ERBB3	0.998	1
DST	MORN1	0.998	1
DST	MYH9	0.998	1
DST	C15orf39	0.998	1
DST	Del_9p21.3	0.998	1
ERBB3	MYH9	0.998	1
ERBB3	XBP1	0.998	1
ERBB3	OXCT2	0.998	1
ERBB3	TTPAL	0.998	1
FBXO17	CASZ1	0.998	1
FBXO17	MLL4	0.998	1
FBXO17	RBMX	0.998	1
FHOD3	ICOSLG	0.998	1
FHOD3	CEP57	0.998	1
FHOD3	TCP11	0.998	1
FXYD5	MLL4	0.998	1
FXYD5	RBMX	0.998	1
GPRIN2	CABYR	0.998	1
GPRIN2	RHOA	0.998	1
GPRIN2	TARBP2	0.998	1
GYG2	HLA-C	0.998	1
GYG2	NFE2L3	0.998	1
GYG2	EIF4A2	0.998	1
GYG2	PSIP1	0.998	1
GYG2	16p-Del	0.998	1
GYG2	Amp_11q13.3	0.998	1
HLA-C	Amp_12p13.33	0.998	1
HLA-C	Del_4q35.1	0.998	1
ICOSLG	ZNF687	0.998	1
ICOSLG	Amp_11q13.3	0.998	1
ICOSLG	Del_8p23.2	0.998	1
ICOSLG	Del_16q24.3	0.998	1
MLC1	FRMPD2	0.998	1
MORN1	TPP2	0.998	1
MORN1	USP36	0.998	1
MYH9	XBP1	0.998	1
MYH9	KDM6A	0.998	1
MYH9	RIBC1	0.998	1
NFE2L3	MR1	0.998	1
NFE2L3	PSIP1	0.998	1
OR2T35	DOCK11	0.998	1
OR4D10	ZNF41	0.998	1
OR4D10	FGFR2	0.998	1
OR4D10	IRS4	0.998	1
OR6C76	UBC	0.998	1
OR6C76	DLG1	0.998	1
OR6C76	MLL4	0.998	1
OR6C76	ZNF687	0.998	1
PPEF1	MR1	0.998	1
PPEF1	RHOA	0.998	1
PPEF1	TARBP2	0.998	1
PPEF1	TCP11	0.998	1
PRICKLE3	MR1	0.998	1
SPRR2B	NF1	0.998	1
UBC	CEP57	0.998	1
WDR52	XBP1	0.998	1
WDR52	RHBG	0.998	1
WDR52	RIBC1	0.998	1
WDR52	TTPAL	0.998	1
XBP1	KDM6A	0.998	1
ZNF41	CEP57	0.998	1
ZNF41	TARBP2	0.998	1
ZNF41	TFE3	0.998	1
ZNF41	4p-Del	0.998	1
AKT2	MUC6	0.998	1
AKT2	RBMX	0.998	1
ANGPT4	MR1	0.998	1
ANGPT4	TFE3	0.998	1
ANGPT4	9p-Del	0.998	1
ATHL1	MR1	0.998	1
ATHL1	NF1	0.998	1
ATHL1	Amp_8q24.21	0.998	1
ATHL1	Del_10q26.3	0.998	1
BCORL1	MKL1	0.998	1
BCORL1	Amp_1q21.3	0.998	1
C15orf39	Del_9q34.2	0.998	1
CABYR	DLG1	0.998	1
CASZ1	RHOA	0.998	1
CASZ1	TARBP2	0.998	1
CCDC82	FRMPD2	0.998	1
CCDC82	TGS1	0.998	1
CCDC82	ZNF687	0.998	1
CDC42EP1	DLG1	0.998	1
CDC42EP1	Amp_11p13	0.998	1
CDC42EP1	Amp_19q13.42	0.998	1
CEP57	DLG1	0.998	1
CEP57	TGS1	0.998	1
DLG1	MKL1	0.998	1
DLG1	TARBP2	0.998	1
DOCK11	FRMPD2	0.998	1
DOCK11	OXCT2	0.998	1
DOCK11	RBMX	0.998	1
DOCK11	RIBC1	0.998	1
DOCK11	ZMYM3	0.998	1
EIF4A2	MR1	0.998	1
EIF4A2	PSIP1	0.998	1
EIF4A2	SPEN	0.998	1
FGFR2	RHOA	0.998	1
FRMPD2	PCNXL2	0.998	1
FRMPD2	RHOA	0.998	1
IRS4	MR1	0.998	1
IRS4	TARBP2	0.998	1
IRS4	Amp_11p13	0.998	1
IRS4	Del_12q23.1	0.998	1
KCNN3	PSIP1	0.998	1
KCNN3	TFE3	0.998	1
KCNN3	Del_14q24.1	0.998	1
KCNN3	Del_21q11.2	0.998	1
KDM6A	RIBC1	0.998	1
KDM6A	TNRC6B	0.998	1
KDM6A	ZNF362	0.998	1
MKL1	MLL4	0.998	1
MKL1	ZMYM3	0.998	1
MLL4	TCP11	0.998	1
MR1	ZNF687	0.998	1
MUC6	NBPF9	0.998	1
PCNXL2	TGS1	0.998	1
RBMX	Amp_10p15.1	0.998	1
RHBG	TNRC6B	0.998	1
RHOA	TGS1	0.998	1
SDC1	Del_18q23	0.998	1
TCP11	TGS1	0.998	1
TFE3	ZNF687	0.998	1
TFE3	Del_5q21.3	0.998	1
TNRC6B	Amp_11p13	0.998	1
TTPAL	Amp_6p23	0.998	1
USP36	Del_6p25.3	0.998	1
ZNF687	Amp_13q34	0.998	1
ZNF687	Del_3p21.31	0.998	1
16p-Amp	5p-Amp	0.998	1
16p-Amp	8p-Amp	0.998	1
16p-Amp	Amp_8p11.23	0.998	1
17q-Amp	20p-Amp	0.998	1
20p-Amp	7p-Amp	0.998	1
20p-Amp	Amp_12q15	0.998	1
20q-Amp	Del_11q23.3	0.998	1
20q-Amp	Del_19p13.3	0.998	1
7p-Amp	Amp_8q24.21	0.998	1
7q-Amp	Amp_3q26.32	0.998	1
8p-Amp	15q-Del	0.998	1
8p-Amp	5q-Del	0.998	1
8q-Amp	13q-Del	0.998	1
8q-Amp	Amp_19q13.42	0.998	1
8q-Amp	Del_19p13.3	0.998	1
11p-Del	17q-Del	0.998	1
11p-Del	6q-Del	0.998	1
11p-Del	Amp_19q12	0.998	1
11p-Del	Del_6q15	0.998	1
11q-Del	5q-Del	0.998	1
11q-Del	Amp_8p11.23	0.998	1
11q-Del	Amp_20q13.2	0.998	1
11q-Del	Del_17q21.31	0.998	1
11q-Del	Del_18q23	0.998	1
13q-Del	Amp_8p11.23	0.998	1
13q-Del	Amp_11q13.3	0.998	1
13q-Del	Amp_19q12	0.998	1
14q-Del	1p-Del	0.998	1
14q-Del	Del_21q11.2	0.998	1
15q-Del	Amp_13q34	0.998	1
15q-Del	Del_6q15	0.998	1
16p-Del	8p-Del	0.998	1
16p-Del	9q-Del	0.998	1
16p-Del	Amp_8p11.21	0.998	1
16p-Del	Amp_13q34	0.998	1
16p-Del	Del_12q23.1	0.998	1
17p-Del	Amp_11q13.3	0.998	1
17q-Del	8p-Del	0.998	1
18p-Del	Amp_11q13.3	0.998	1
18p-Del	Amp_17q12	0.998	1
18p-Del	Del_6q15	0.998	1
18q-Del	4q-Del	0.998	1
18q-Del	Del_9q21.11	0.998	1
18q-Del	Del_14q24.1	0.998	1
1p-Del	5q-Del	0.998	1
1p-Del	Amp_11q13.3	0.998	1
1p-Del	Del_4p16.3	0.998	1
1p-Del	Del_9q34.2	0.998	1
1p-Del	Del_14q24.1	0.998	1
1p-Del	Del_19p13.3	0.998	1
1q-Del	9p-Del	0.998	1
1q-Del	Del_1p22.1	0.998	1
1q-Del	Del_5q11.2	0.998	1
22q-Del	Del_10q26.3	0.998	1
4p-Del	Del_7p22.3	0.998	1
4p-Del	Del_7q36.1	0.998	1
4q-Del	Del_9p21.3	0.998	1
5q-Del	Amp_19p13.12	0.998	1
5q-Del	Del_9p21.3	0.998	1
5q-Del	Del_9q21.11	0.998	1
5q-Del	Del_18q23	0.998	1
6q-Del	9q-Del	0.998	1
6q-Del	Del_2q37.3	0.998	1
8p-Del	Del_10q26.3	0.998	1
8p-Del	Del_21q11.2	0.998	1
9p-Del	Del_5q11.2	0.998	1
9p-Del	Del_12q23.1	0.998	1
9p-Del	Del_12q24.31	0.998	1
9q-Del	Amp_12p13.33	0.998	1
9q-Del	Del_1p22.1	0.998	1
9q-Del	Del_4q35.1	0.998	1
Amp_1p22.3	Del_15q13.1	0.998	1
Amp_1q44	Amp_3q26.32	0.998	1
Amp_1q44	Del_1p22.1	0.998	1
Amp_3q26.32	Del_20p13	0.998	1
Amp_4q13.3	Amp_15q26.3	0.998	1
Amp_4q13.3	Amp_20q13.2	0.998	1
Amp_6p23	Amp_19q12	0.998	1
Amp_6p23	Del_8p23.2	0.998	1
Amp_8p11.23	Del_9p23	0.998	1
Amp_10p15.1	Amp_19p13.12	0.998	1
Amp_10p15.1	Del_19p13.3	0.998	1
Amp_11p13	Amp_15q26.3	0.998	1
Amp_11q14.1	Amp_12q15	0.998	1
Amp_11q14.1	Del_1p22.1	0.998	1
Amp_11q14.1	Del_10q26.3	0.998	1
Amp_12p13.33	Del_3p21.31	0.998	1
Amp_12q15	Del_18q23	0.998	1
Amp_13q34	Del_22q13.32	0.998	1
Amp_14q21.1	Del_2q37.3	0.998	1
Amp_15q26.3	Amp_19q13.42	0.998	1
Amp_15q26.3	Del_3p21.31	0.998	1
Amp_15q26.3	Del_11q23.3	0.998	1
Amp_17q12	Del_1p22.1	0.998	1
Amp_17q12	Del_9p23	0.998	1
Amp_17q23.1	Del_11p15.5	0.998	1
Amp_17q23.1	Del_19p13.3	0.998	1
Amp_19q12	Amp_20q13.2	0.998	1
Amp_19q12	Del_4p16.3	0.998	1
Amp_19q12	Del_11p15.5	0.998	1
Amp_20q13.2	Del_11p15.5	0.998	1
Amp_20q13.2	Del_20p13	0.998	1
Del_1p36.13	Del_12q23.1	0.998	1
Del_1p22.1	Del_8p23.2	0.998	1
Del_2q37.3	Del_6q15	0.998	1
Del_6p25.3	Del_9q21.11	0.998	1
Del_6p25.3	Del_10q23.31	0.998	1
Del_6q15	Del_9q34.2	0.998	1
Del_7p22.3	Del_9p23	0.998	1
Del_7p22.3	Del_9q34.2	0.998	1
Del_7p22.3	Del_16q24.3	0.998	1
Del_7q36.1	Del_10q23.31	0.998	1
Del_7q36.1	Del_10q26.3	0.998	1
Del_7q36.1	Del_12q23.1	0.998	1
Del_7q36.1	Del_16q24.3	0.998	1
Del_10q26.3	Del_12q23.1	0.998	1
Del_11q23.3	Del_12p13.1	0.998	1
Del_12q23.1	Del_13q14.2	0.998	1
Del_12q24.31	Del_13q14.2	0.998	1
Del_16q24.3	Del_17q21.31	0.998	1
Del_19q13.32	Del_22q13.32	0.998	1
AARS	ARID1A	0.999	1
AARS	KRAS	0.999	1
AARS	FBXO17	0.999	1
AARS	OR6C76	0.999	1
AARS	SHISA4	0.999	1
AARS	DOCK11	0.999	1
AARS	MKL1	0.999	1
AARS	PCNXL2	0.999	1
ACTL6B	NBPF9	0.999	1
ACTL6B	ZNF362	0.999	1
APC	FHOD3	0.999	1
APC	GPRIN2	0.999	1
APC	SPRR2B	0.999	1
APC	UBC	0.999	1
APC	IRS4	0.999	1
APC	MLL4	0.999	1
APC	RBMX	0.999	1
APC	SPEN	0.999	1
AQP12A	C1QTNF5	0.999	1
AQP12A	TCP10	0.999	1
AQP12A	GYG2	0.999	1
AQP12A	HLA-C	0.999	1
AQP12A	20p-Amp	0.999	1
AQP12A	18p-Del	0.999	1
AQP12A	18q-Del	0.999	1
ARID1A	SMAD4	0.999	1
ARID1A	ATXN7L1	0.999	1
ARID1A	GYG2	0.999	1
ARID1A	MORN1	0.999	1
ARID1A	MYH9	0.999	1
ARID1A	KDM6A	0.999	1
ARID1A	TNRC6B	0.999	1
ARID1A	USP36	0.999	1
ARID1A	Amp_6p23	0.999	1
ASB10	RUNX1	0.999	1
ASB10	SMAD2	0.999	1
ASB10	DLX6	0.999	1
ASB10	Del_22q13.32	0.999	1
C1QTNF5	SLC35B2	0.999	1
C1QTNF5	17q-Del	0.999	1
CASP8	NCOR1	0.999	1
CASP8	ABCA8	0.999	1
CASP8	FBXO17	0.999	1
CASP8	AKT2	0.999	1
CASP8	CDC42EP1	0.999	1
CASP8	KDM6A	0.999	1
CASP8	RBMX	0.999	1
CASP8	RIBC1	0.999	1
CBFB	GATA3	0.999	1
CBFB	PIK3CA	0.999	1
CBFB	TBL1XR1	0.999	1
CDH1	TBX3	0.999	1
CDH1	DNAH12	0.999	1
CDH1	MYH9	0.999	1
CDH1	16q-Del	0.999	1
CDH1	Amp_1q44	0.999	1
CDKN1B	FXYD5	0.999	1
CDKN1B	CCDC82	0.999	1
CDKN1B	MKL1	0.999	1
CDKN1B	RHOA	0.999	1
CDKN1B	TCP11	0.999	1
CTCF	TBX3	0.999	1
CTCF	16q-Del	0.999	1
EPDR1	PTPN22	0.999	1
EPDR1	IRS4	0.999	1
ERBB2	TBL1XR1	0.999	1
ERBB2	SPRR2B	0.999	1
ERBB2	ZNF41	0.999	1
FAM86B1	SHISA4	0.999	1
FBXW7	PIK3R1	0.999	1
FBXW7	HRNR	0.999	1
FBXW7	SPRR2B	0.999	1
FBXW7	FRMPD2	0.999	1
FBXW7	RHBG	0.999	1
FOXA1	PSIP1	0.999	1
FOXA1	1q-Amp	0.999	1
GATA3	CCDC82	0.999	1
GATA3	Amp_1q21.3	0.999	1
GPS2	HLA-DRB5	0.999	1
GPS2	OXCT2	0.999	1
HIST1H2BC	SMAD2	0.999	1
HIST1H2BC	SLC35B2	0.999	1
HIST1H2BC	USP36	0.999	1
HIST1H3B	TAF1L	0.999	1
HIST1H3B	CCL13	0.999	1
HIST1H3B	ERBB3	0.999	1
HIST1H3B	FXYD5	0.999	1
HIST1H3B	MKL1	0.999	1
HIST1H3B	OXCT2	0.999	1
HIST1H3B	ZBTB7C	0.999	1
HLA-DRB5	FHOD3	0.999	1
HLA-DRB5	GPRIN2	0.999	1
HLA-DRB5	ANGPT4	0.999	1
HLA-DRB5	CASZ1	0.999	1
HLA-DRB5	FRMPD2	0.999	1
HLA-DRB5	IRS4	0.999	1
HLA-DRB5	MUC6	0.999	1
KRAS	SMAD2	0.999	1
KRAS	OR4D10	0.999	1
KRAS	MR1	0.999	1
KRAS	TPP2	0.999	1
MAP2K4	ATXN2	0.999	1
MAP3K1	PIK3CA	0.999	1
MAP3K1	PAX2	0.999	1
MAP3K1	RHBG	0.999	1
MAP3K1	16q-Del	0.999	1
MAP3K1	Del_16q24.3	0.999	1
MLL3	PIK3CA	0.999	1
MLL3	CCNL2	0.999	1
MLL3	FHOD3	0.999	1
MLL3	OR4D10	0.999	1
MLL3	RIBC1	0.999	1
MLL3	TNRC6B	0.999	1
MYB	RB1	0.999	1
MYB	TAF1L	0.999	1
MYB	AKT2	0.999	1
MYB	PAX2	0.999	1
NCOR1	FBXO17	0.999	1
NCOR1	MLL4	0.999	1
NCOR1	PCNXL2	0.999	1
PIK3CA	TAF1L	0.999	1
PIK3R1	ABCA8	0.999	1
PIK3R1	FHOD3	0.999	1
PIK3R1	FRMPD2	0.999	1
PIK3R1	RHBG	0.999	1
PIK3R1	RIBC1	0.999	1
PIK3R1	ZMYM3	0.999	1
PIWIL1	TBX3	0.999	1
PIWIL1	PPEF1	0.999	1
PIWIL1	ATHL1	0.999	1
PIWIL1	CASZ1	0.999	1
PIWIL1	MLL4	0.999	1
PIWIL1	TGS1	0.999	1
PTEN	OR6C76	0.999	1
PTHLH	SMAD2	0.999	1
PTHLH	ATXN7L1	0.999	1
PTHLH	OR4D10	0.999	1
PTHLH	TFE3	0.999	1
PTPN22	RPGR	0.999	1
PTPN22	ANKRD12	0.999	1
PTPN22	FBXO17	0.999	1
PTPN22	FXYD5	0.999	1
PTPN22	XBP1	0.999	1
PTPN22	AKT2	0.999	1
PTPN22	CCDC82	0.999	1
PTPN22	MKL1	0.999	1
PTPN22	PCNXL2	0.999	1
PTPN22	RHBG	0.999	1
PTPN22	RHOA	0.999	1
PTPN22	TARBP2	0.999	1
PTPN22	TCP11	0.999	1
PTPN22	TTPAL	0.999	1
PTPN22	20p-Amp	0.999	1
RB1	COL6A5	0.999	1
RB1	SPRR2B	0.999	1
RB1	ZNF41	0.999	1
RB1	FRMPD2	0.999	1
RB1	15q-Del	0.999	1
RB1	Del_7q36.1	0.999	1
RPGR	ATXN2	0.999	1
RPGR	PPEF1	0.999	1
RPGR	SPRR2B	0.999	1
RPGR	UBC	0.999	1
RPGR	ZNF41	0.999	1
RPGR	CASZ1	0.999	1
RPGR	FGFR2	0.999	1
RPGR	MLL4	0.999	1
RPGR	NF1	0.999	1
RPGR	ZMYM3	0.999	1
RUNX1	MORN1	0.999	1
SMAD2	TBX3	0.999	1
SMAD2	ATXN7L1	0.999	1
SMAD2	DST	0.999	1
SMAD2	GRHL2	0.999	1
SMAD2	MR1	0.999	1
SMAD2	NF1	0.999	1
SMAD2	RHOA	0.999	1
SMAD2	SPEN	0.999	1
SMAD2	TARBP2	0.999	1
SMAD2	TFE3	0.999	1
SMAD2	TPP2	0.999	1
SMAD4	ATXN7L1	0.999	1
SMAD4	DST	0.999	1
SMAD4	GYG2	0.999	1
SMAD4	MORN1	0.999	1
SMAD4	CCDC82	0.999	1
SMAD4	PSIP1	0.999	1
SMAD4	SPEN	0.999	1
SMAD4	TCP11	0.999	1
SMAD4	Del_12p13.1	0.999	1
TAF1L	SPRR2B	0.999	1
TAF1L	ANGPT4	0.999	1
TAF1L	FRMPD2	0.999	1
TAF1L	MLL4	0.999	1
TAF1L	RBMX	0.999	1
TAF1L	SPEN	0.999	1
TAF1L	ZNF687	0.999	1
TBL1XR1	MLC1	0.999	1
TBL1XR1	CCDC82	0.999	1
TBL1XR1	OXCT2	0.999	1
TBX3	ZFP36L1	0.999	1
TBX3	AKD1	0.999	1
TBX3	DNAH12	0.999	1
TBX3	GYG2	0.999	1
TCP10	Del_7q36.1	0.999	1
TP53	20p-Amp	0.999	1
TP53	Amp_20q13.2	0.999	1
TP53	Del_3p21.31	0.999	1
TP53	Del_6p25.3	0.999	1
VCPIP1	FXYD5	0.999	1
VCPIP1	MLC1	0.999	1
VCPIP1	AKT2	0.999	1
VCPIP1	CCDC82	0.999	1
VCPIP1	MKL1	0.999	1
VCPIP1	PCNXL2	0.999	1
VCPIP1	TARBP2	0.999	1
VCPIP1	TCP11	0.999	1
VCPIP1	20q-Amp	0.999	1
VCPIP1	Amp_19q13.42	0.999	1
WSCD2	ERBB3	0.999	1
WSCD2	RHBG	0.999	1
ZFP36L1	NBPF9	0.999	1
ZFP36L1	18p-Del	0.999	1
ZFP36L1	18q-Del	0.999	1
ZFP36L1	Del_1p22.1	0.999	1
ZFP36L1	Del_13q14.2	0.999	1
ZFP36L2	OR4D10	0.999	1
ABCA8	FHOD3	0.999	1
ABCA8	XBP1	0.999	1
ABCA8	MLL4	0.999	1
ABCA8	RHBG	0.999	1
ABCA8	RIBC1	0.999	1
ABCA8	SPEN	0.999	1
ABCA8	TGS1	0.999	1
AKD1	SPRR2B	0.999	1
AKD1	ZNF41	0.999	1
AKD1	CASZ1	0.999	1
AKD1	DLG1	0.999	1
AKD1	FGFR2	0.999	1
AKD1	TGS1	0.999	1
ANKRD12	SPRR2B	0.999	1
ANKRD12	ZNF41	0.999	1
ANKRD12	CASZ1	0.999	1
ANKRD12	DLG1	0.999	1
ANKRD12	MLL4	0.999	1
ANKRD12	SPEN	0.999	1
ANKRD12	TGS1	0.999	1
ATXN2	ERBB3	0.999	1
ATXN2	FHOD3	0.999	1
ATXN2	MYH9	0.999	1
ATXN2	UBC	0.999	1
ATXN2	WDR52	0.999	1
ATXN2	XBP1	0.999	1
ATXN2	RIBC1	0.999	1
ATXN2	SPEN	0.999	1
ATXN2	TGS1	0.999	1
ATXN2	TNRC6B	0.999	1
ATXN2	ZNF362	0.999	1
ATXN7L1	CCNL2	0.999	1
ATXN7L1	DST	0.999	1
ATXN7L1	GYG2	0.999	1
ATXN7L1	OR4D10	0.999	1
ATXN7L1	C15orf39	0.999	1
ATXN7L1	MR1	0.999	1
ATXN7L1	NF1	0.999	1
ATXN7L1	PSIP1	0.999	1
ATXN7L1	TFE3	0.999	1
CCL13	PPEF1	0.999	1
CCL13	FRMPD2	0.999	1
CCL13	Amp_12q15	0.999	1
CCL13	Del_7q36.1	0.999	1
CCNL2	ICOSLG	0.999	1
CCNL2	MORN1	0.999	1
CCNL2	CCDC82	0.999	1
CCNL2	MR1	0.999	1
CCNL2	PSIP1	0.999	1
CCNL2	RHOA	0.999	1
CCNL2	TCP11	0.999	1
COL6A5	GYG2	0.999	1
COL6A5	ANGPT4	0.999	1
COL6A5	C15orf39	0.999	1
DLX6	ZNF41	0.999	1
DLX6	KCNN3	0.999	1
DLX6	Del_4q35.1	0.999	1
DNAH12	GPRIN2	0.999	1
DNAH12	HRNR	0.999	1
DNAH12	SPRR2B	0.999	1
DNAH12	ZNF41	0.999	1
DNAH12	FGFR2	0.999	1
DNAH12	Del_17p12	0.999	1
DST	OR4D10	0.999	1
DST	CABYR	0.999	1
DST	DLG1	0.999	1
DST	MLL4	0.999	1
DST	PCNXL2	0.999	1
DST	TFE3	0.999	1
DST	9q-Del	0.999	1
ERBB3	PPEF1	0.999	1
ERBB3	SPRR2B	0.999	1
ERBB3	UBC	0.999	1
ERBB3	SDC1	0.999	1
ERBB3	TGS1	0.999	1
ERBB3	18p-Del	0.999	1
ERBB3	Del_3p21.31	0.999	1
ERBB3	Del_18q23	0.999	1
FBXO17	NFE2L3	0.999	1
FBXO17	PPEF1	0.999	1
FBXO17	UBC	0.999	1
FBXO17	ATHL1	0.999	1
FBXO17	EIF4A2	0.999	1
FBXO17	PSIP1	0.999	1
FBXO17	TGS1	0.999	1
FHOD3	SHISA4	0.999	1
FHOD3	CDC42EP1	0.999	1
FHOD3	RIBC1	0.999	1
FHOD3	Amp_1p22.3	0.999	1
FXYD5	MORN1	0.999	1
FXYD5	TGS1	0.999	1
FXYD5	1q-Del	0.999	1
FXYD5	Del_12q24.31	0.999	1
GPRIN2	OXCT2	0.999	1
GRHL2	OR4D10	0.999	1
GRHL2	RHOA	0.999	1
GRHL2	TARBP2	0.999	1
GYG2	AKT2	0.999	1
GYG2	MR1	0.999	1
GYG2	SPEN	0.999	1
HRNR	16p-Del	0.999	1
MORN1	OR6C76	0.999	1
MORN1	MKL1	0.999	1
MORN1	MR1	0.999	1
MORN1	RHOA	0.999	1
MORN1	TCP11	0.999	1
MORN1	TFE3	0.999	1
MYH9	PPEF1	0.999	1
MYH9	UBC	0.999	1
MYH9	IRS4	0.999	1
MYH9	MLL4	0.999	1
MYH9	MUC6	0.999	1
MYH9	NF1	0.999	1
MYH9	RBMX	0.999	1
MYH9	SPEN	0.999	1
MYH9	1q-Amp	0.999	1
NFE2L3	CXCR3	0.999	1
OR2T35	MED23	0.999	1
OR4D10	MR1	0.999	1
OR4D10	TFE3	0.999	1
OR4D10	TPP2	0.999	1
OR6C76	PRICKLE3	0.999	1
OR6C76	EIF4A2	0.999	1
OR6C76	MR1	0.999	1
OR6C76	USP36	0.999	1
PPEF1	XBP1	0.999	1
PPEF1	PCNXL2	0.999	1
PPEF1	ZBTB7C	0.999	1
PRICKLE3	NBPF9	0.999	1
PRICKLE3	RHBG	0.999	1
SHISA4	ANGPT4	0.999	1
SHISA4	IRS4	0.999	1
SHISA4	ZNF687	0.999	1
SPRR2B	WDR52	0.999	1
SPRR2B	CASZ1	0.999	1
SPRR2B	DOCK11	0.999	1
SPRR2B	PCNXL2	0.999	1
SPRR2B	RBMX	0.999	1
SPRR2B	ZMYM3	0.999	1
UBC	XBP1	0.999	1
UBC	CDC42EP1	0.999	1
UBC	KDM6A	0.999	1
UBC	1q-Amp	0.999	1
WDR52	ZNF41	0.999	1
WDR52	CASZ1	0.999	1
WDR52	FGFR2	0.999	1
WDR52	FRMPD2	0.999	1
WDR52	SPEN	0.999	1
WDR52	ZMYM3	0.999	1
XBP1	ATHL1	0.999	1
XBP1	CASZ1	0.999	1
XBP1	MLL4	0.999	1
XBP1	MUC6	0.999	1
XBP1	TGS1	0.999	1
XBP1	Amp_17q12	0.999	1
ZNF41	CDC42EP1	0.999	1
ZNF41	DOCK11	0.999	1
ZNF41	PAX2	0.999	1
ZNF41	RIBC1	0.999	1
ZNF41	TTPAL	0.999	1
ANGPT4	RHOA	0.999	1
ANGPT4	RIBC1	0.999	1
ANGPT4	ZBTB7C	0.999	1
ANGPT4	Del_9p23	0.999	1
ANKRD20A4	PSIP1	0.999	1
ANKRD20A4	TARBP2	0.999	1
ATHL1	RIBC1	0.999	1
ATHL1	Amp_14q21.1	0.999	1
ATHL1	Del_1p36.13	0.999	1
BCORL1	RHBG	0.999	1
C15orf39	TFE3	0.999	1
C15orf39	9q-Del	0.999	1
C15orf39	Del_15q13.1	0.999	1
C15orf39	Del_20p13	0.999	1
CABYR	1q-Del	0.999	1
CABYR	Amp_6p23	0.999	1
CABYR	Amp_17q12	0.999	1
CASZ1	MUC6	0.999	1
CASZ1	OXCT2	0.999	1
CASZ1	RHBG	0.999	1
CASZ1	RIBC1	0.999	1
CCDC82	SPEN	0.999	1
CDC42EP1	PSIP1	0.999	1
CDC42EP1	TGS1	0.999	1
CDC42EP1	USP36	0.999	1
CDC42EP1	Amp_13q34	0.999	1
CDC42EP1	Amp_14q21.1	0.999	1
CEP57	PSIP1	0.999	1
CEP57	TFE3	0.999	1
CXCR3	KCNN3	0.999	1
CXCR3	PSIP1	0.999	1
CXCR3	SLC35B2	0.999	1
CXCR3	USP36	0.999	1
CXCR3	Del_6q15	0.999	1
DLG1	TTPAL	0.999	1
DLG1	ZBTB7C	0.999	1
DLG1	16p-Amp	0.999	1
EIF4A2	MKL1	0.999	1
EIF4A2	RHOA	0.999	1
FGFR2	RIBC1	0.999	1
FRMPD2	OXCT2	0.999	1
FRMPD2	RIBC1	0.999	1
FRMPD2	ZMYM3	0.999	1
IRS4	OXCT2	0.999	1
IRS4	RHBG	0.999	1
IRS4	RIBC1	0.999	1
IRS4	TNRC6B	0.999	1
IRS4	TTPAL	0.999	1
KCNN3	Amp_10p15.1	0.999	1
KCNN3	Del_8p23.2	0.999	1
KDM6A	MED23	0.999	1
KDM6A	RBMX	0.999	1
KDM6A	SPEN	0.999	1
KDM6A	TGS1	0.999	1
KDM6A	ZMYM3	0.999	1
KDM6A	ZNF687	0.999	1
MED23	SDC1	0.999	1
MED23	ZBTB7C	0.999	1
MED23	ZNF362	0.999	1
MED23	18p-Del	0.999	1
MED23	6q-Del	0.999	1
MKL1	TGS1	0.999	1
MKL1	Del_12q23.1	0.999	1
MKL1	Del_12q24.31	0.999	1
MKL1	Del_18q23	0.999	1
MLL4	ZMYM3	0.999	1
MLL4	Amp_17q23.1	0.999	1
MR1	PSIP1	0.999	1
MR1	RHOA	0.999	1
MR1	SPEN	0.999	1
MR1	TARBP2	0.999	1
MR1	TPP2	0.999	1
MR1	USP36	0.999	1
MUC6	OXCT2	0.999	1
MUC6	RHBG	0.999	1
MUC6	RIBC1	0.999	1
NBPF9	1p-Del	0.999	1
NBPF9	1q-Del	0.999	1
PAX2	ZMYM3	0.999	1
PAX2	Del_7q36.1	0.999	1
PSIP1	TFE3	0.999	1
RHBG	TGS1	0.999	1
RHBG	ZMYM3	0.999	1
RHBG	17q-Del	0.999	1
RHOA	18p-Del	0.999	1
RHOA	18q-Del	0.999	1
RIBC1	ZMYM3	0.999	1
SDC1	18p-Del	0.999	1
SDC1	18q-Del	0.999	1
SLC35B2	TARBP2	0.999	1
SLC35B2	Amp_12q15	0.999	1
SPEN	Amp_11p13	0.999	1
TARBP2	Amp_6p23	0.999	1
TGS1	TNRC6B	0.999	1
TNRC6B	Del_12q24.31	0.999	1
TTPAL	Amp_13q34	0.999	1
TTPAL	Amp_19q12	0.999	1
ZMYM3	ZNF362	0.999	1
ZNF362	ZNF687	0.999	1
16p-Amp	1q-Amp	0.999	1
16p-Amp	Del_16q24.3	0.999	1
17q-Amp	8q-Amp	0.999	1
17q-Amp	Amp_8p11.21	0.999	1
20p-Amp	5p-Amp	0.999	1
20p-Amp	7q-Amp	0.999	1
20p-Amp	8p-Amp	0.999	1
20p-Amp	13q-Del	0.999	1
20p-Amp	Amp_3q26.32	0.999	1
20p-Amp	Amp_8p11.23	0.999	1
20p-Amp	Del_9p21.3	0.999	1
20q-Amp	8p-Amp	0.999	1
20q-Amp	18q-Del	0.999	1
20q-Amp	Amp_14q21.1	0.999	1
20q-Amp	Amp_17q12	0.999	1
20q-Amp	Del_6q15	0.999	1
20q-Amp	Del_18q23	0.999	1
5p-Amp	Amp_8q24.21	0.999	1
5p-Amp	Amp_12q15	0.999	1
7p-Amp	Amp_3q26.32	0.999	1
7p-Amp	Amp_8p11.21	0.999	1
7q-Amp	Amp_1q44	0.999	1
7q-Amp	Amp_8p11.21	0.999	1
7q-Amp	Amp_20q13.2	0.999	1
8q-Amp	Amp_13q34	0.999	1
11p-Del	Amp_1q44	0.999	1
11p-Del	Amp_8q24.21	0.999	1
11p-Del	Amp_19p13.12	0.999	1
11p-Del	Del_5q11.2	0.999	1
11p-Del	Del_12q23.1	0.999	1
11p-Del	Del_12q24.31	0.999	1
11p-Del	Del_15q13.1	0.999	1
11p-Del	Del_16q24.3	0.999	1
11q-Del	14q-Del	0.999	1
11q-Del	18q-Del	0.999	1
11q-Del	Amp_8q24.21	0.999	1
11q-Del	Del_12q23.1	0.999	1
13q-Del	1p-Del	0.999	1
13q-Del	Amp_17q12	0.999	1
13q-Del	Del_4q35.1	0.999	1
13q-Del	Del_5q21.3	0.999	1
13q-Del	Del_19q13.32	0.999	1
14q-Del	Del_8p23.2	0.999	1
14q-Del	Del_11p15.5	0.999	1
15q-Del	1p-Del	0.999	1
15q-Del	Del_6p25.3	0.999	1
15q-Del	Del_9q34.2	0.999	1
16p-Del	18p-Del	0.999	1
16p-Del	18q-Del	0.999	1
16p-Del	Amp_8q24.21	0.999	1
16p-Del	Amp_12p13.33	0.999	1
16p-Del	Del_4p16.3	0.999	1
16p-Del	Del_8p23.2	0.999	1
16p-Del	Del_9q21.11	0.999	1
16q-Del	17q-Del	0.999	1
16q-Del	18q-Del	0.999	1
16q-Del	1p-Del	0.999	1
17p-Del	1p-Del	0.999	1
17p-Del	Del_6p25.3	0.999	1
17q-Del	5q-Del	0.999	1
17q-Del	Del_11q23.3	0.999	1
17q-Del	Del_19q13.32	0.999	1
18p-Del	9q-Del	0.999	1
18p-Del	Del_20p13	0.999	1
18q-Del	Amp_11q14.1	0.999	1
18q-Del	Amp_20q13.2	0.999	1
18q-Del	Del_4q35.1	0.999	1
18q-Del	Del_10q23.31	0.999	1
1p-Del	9q-Del	0.999	1
1p-Del	Amp_1q21.3	0.999	1
1p-Del	Del_7p22.3	0.999	1
1p-Del	Del_15q13.1	0.999	1
1q-Del	22q-Del	0.999	1
1q-Del	Amp_13q34	0.999	1
1q-Del	Del_9p23	0.999	1
1q-Del	Del_9p21.3	0.999	1
1q-Del	Del_11q23.3	0.999	1
22q-Del	4q-Del	0.999	1
22q-Del	Amp_8p11.23	0.999	1
22q-Del	Amp_14q21.1	0.999	1
22q-Del	Del_2q37.3	0.999	1
22q-Del	Del_4p16.3	0.999	1
22q-Del	Del_11p15.5	0.999	1
22q-Del	Del_19q13.32	0.999	1
22q-Del	Del_21q11.2	0.999	1
4p-Del	Amp_3p25.1	0.999	1
4p-Del	Del_9q21.11	0.999	1
4q-Del	Amp_6p23	0.999	1
4q-Del	Del_6p25.3	0.999	1
4q-Del	Del_18q23	0.999	1
4q-Del	Del_21q11.2	0.999	1
4q-Del	Del_22q13.32	0.999	1
5q-Del	Del_12p13.1	0.999	1
8p-Del	Amp_12q15	0.999	1
8p-Del	Del_9p23	0.999	1
8p-Del	Del_10q23.31	0.999	1
8p-Del	Del_12q24.31	0.999	1
8p-Del	Del_15q13.1	0.999	1
8p-Del	Del_16q24.3	0.999	1
8p-Del	Del_17q21.31	0.999	1
9p-Del	Del_4q35.1	0.999	1
9p-Del	Del_12p13.1	0.999	1
9p-Del	Del_20p13	0.999	1
Amp_1p22.3	Amp_6p23	0.999	1
Amp_1q21.3	Amp_6p23	0.999	1
Amp_1q44	Del_16q24.3	0.999	1
Amp_3p25.1	Amp_6p23	0.999	1
Amp_3p25.1	Amp_14q21.1	0.999	1
Amp_3p25.1	Del_14q24.1	0.999	1
Amp_3q26.32	Amp_20q13.2	0.999	1
Amp_6p23	Amp_8p11.21	0.999	1
Amp_6q21	Amp_10p15.1	0.999	1
Amp_6q21	Del_9q34.2	0.999	1
Amp_6q21	Del_17q21.31	0.999	1
Amp_8p11.23	Amp_17q23.1	0.999	1
Amp_8p11.23	Amp_19q13.42	0.999	1
Amp_8p11.23	Del_13q14.2	0.999	1
Amp_8p11.23	Del_16q24.3	0.999	1
Amp_8p11.23	Del_19p13.3	0.999	1
Amp_8p11.21	Amp_10q22.3	0.999	1
Amp_8p11.21	Amp_14q21.1	0.999	1
Amp_8p11.21	Del_6q15	0.999	1
Amp_8p11.21	Del_11q23.3	0.999	1
Amp_8q24.21	Amp_19q13.42	0.999	1
Amp_8q24.21	Del_7p22.3	0.999	1
Amp_8q24.21	Del_9p23	0.999	1
Amp_8q24.21	Del_12q23.1	0.999	1
Amp_8q24.21	Del_15q13.1	0.999	1
Amp_8q24.21	Del_18q23	0.999	1
Amp_10p15.1	Amp_10q22.3	0.999	1
Amp_10p15.1	Amp_19q13.42	0.999	1
Amp_10p15.1	Del_12q24.31	0.999	1
Amp_11q13.3	Amp_14q21.1	0.999	1
Amp_11q14.1	Del_4q35.1	0.999	1
Amp_11q14.1	Del_6p25.3	0.999	1
Amp_11q14.1	Del_8p23.2	0.999	1
Amp_11q14.1	Del_9p23	0.999	1
Amp_11q14.1	Del_9q21.11	0.999	1
Amp_12p13.33	Amp_15q26.3	0.999	1
Amp_12p13.33	Del_4p16.3	0.999	1
Amp_12p13.33	Del_9q34.2	0.999	1
Amp_12q15	Del_8p23.2	0.999	1
Amp_13q34	Del_3p21.31	0.999	1
Amp_13q34	Del_10q26.3	0.999	1
Amp_13q34	Del_12q24.31	0.999	1
Amp_15q26.3	Del_5q21.3	0.999	1
Amp_17q23.1	Del_6q15	0.999	1
Amp_17q23.1	Del_6q27	0.999	1
Amp_17q23.1	Del_20p13	0.999	1
Amp_19p13.12	Del_5q11.2	0.999	1
Amp_19p13.12	Del_12q23.1	0.999	1
Amp_19p13.12	Del_14q24.1	0.999	1
Amp_19p13.12	Del_19q13.32	0.999	1
Amp_19q13.42	Del_19q13.32	0.999	1
Amp_20q13.2	Del_7p22.3	0.999	1
Amp_20q13.2	Del_11q23.3	0.999	1
Del_1p22.1	Del_9q21.11	0.999	1
Del_1p22.1	Del_9q34.2	0.999	1
Del_1p22.1	Del_12q24.31	0.999	1
Del_2q37.3	Del_10q23.31	0.999	1
Del_2q37.3	Del_12p13.1	0.999	1
Del_3p21.31	Del_6q15	0.999	1
Del_4p16.3	Del_6p25.3	0.999	1
Del_4p16.3	Del_6q27	0.999	1
Del_4p16.3	Del_7q36.1	0.999	1
Del_4p16.3	Del_9q34.2	0.999	1
Del_4p16.3	Del_12p13.1	0.999	1
Del_4q35.1	Del_12p13.1	0.999	1
Del_4q35.1	Del_21q11.2	0.999	1
Del_5q21.3	Del_6p25.3	0.999	1
Del_5q21.3	Del_6q27	0.999	1
Del_5q21.3	Del_7p22.3	0.999	1
Del_5q21.3	Del_9p23	0.999	1
Del_5q21.3	Del_9q21.11	0.999	1
Del_5q21.3	Del_18q23	0.999	1
Del_5q21.3	Del_22q13.32	0.999	1
Del_6p25.3	Del_10q26.3	0.999	1
Del_6p25.3	Del_15q13.1	0.999	1
Del_6p25.3	Del_18q23	0.999	1
Del_6q15	Del_17q21.31	0.999	1
Del_6q27	Del_9q34.2	0.999	1
Del_6q27	Del_18q23	0.999	1
Del_6q27	Del_21q11.2	0.999	1
Del_7p22.3	Del_9q21.11	0.999	1
Del_7q36.1	Del_11p15.5	0.999	1
Del_7q36.1	Del_11q23.3	0.999	1
Del_7q36.1	Del_15q13.1	0.999	1
Del_7q36.1	Del_17p12	0.999	1
Del_8p23.2	Del_17q21.31	0.999	1
Del_9q34.2	Del_12q23.1	0.999	1
Del_9q34.2	Del_16q24.3	0.999	1
Del_9q34.2	Del_18q23	0.999	1
Del_9q34.2	Del_19q13.32	0.999	1
Del_10q23.31	Del_12p13.1	0.999	1
Del_10q26.3	Del_22q13.32	0.999	1
Del_11p15.5	Del_12p13.1	0.999	1
Del_11q23.3	Del_12q23.1	0.999	1
Del_12p13.1	Del_18q23	0.999	1
Del_12q24.31	Del_16q24.3	0.999	1
Del_15q13.1	Del_19q13.32	0.999	1
Del_21q11.2	Del_22q13.32	0.999	1
AARS	APC	1	1
AARS	HLA-DRB5	1	1
AARS	PIWIL1	1	1
AARS	AKD1	1	1
AARS	ATXN7L1	1	1
AARS	DST	1	1
AARS	WDR52	1	1
AARS	XBP1	1	1
AARS	EIF4A2	1	1
AARS	KDM6A	1	1
AARS	RHBG	1	1
AARS	RIBC1	1	1
ACTL6B	PAX2	1	1
ACTL6B	Del_8p23.2	1	1
APC	FBXW7	1	1
APC	NCOR1	1	1
APC	PIWIL1	1	1
APC	RPGR	1	1
APC	SMAD2	1	1
APC	AKD1	1	1
APC	ATXN2	1	1
APC	ATXN7L1	1	1
APC	COL6A5	1	1
APC	DNAH12	1	1
APC	DST	1	1
APC	MORN1	1	1
APC	MYH9	1	1
APC	OR4D10	1	1
APC	PPEF1	1	1
APC	WDR52	1	1
APC	ATHL1	1	1
APC	CASZ1	1	1
APC	KDM6A	1	1
APC	MR1	1	1
APC	NF1	1	1
APC	PCNXL2	1	1
APC	RHBG	1	1
APC	RIBC1	1	1
APC	TFE3	1	1
APC	ZMYM3	1	1
APC	ZNF687	1	1
AQP12A	HLA-DRB5	1	1
AQP12A	GPRIN2	1	1
AQP12A	SPRR2B	1	1
AQP12A	OXCT2	1	1
AQP12A	20q-Amp	1	1
ARID1A	NCOR1	1	1
ARID1A	PTPN22	1	1
ARID1A	CCNL2	1	1
ARID1A	ERBB3	1	1
ARID1A	FBXO17	1	1
ARID1A	MUC6	1	1
ARID1A	RIBC1	1	1
ARID1A	SPEN	1	1
ARID1A	17q-Amp	1	1
C1QTNF5	RB1	1	1
C1QTNF5	SPRR2B	1	1
C1QTNF5	AKT2	1	1
C1QTNF5	CDC42EP1	1	1
CASP8	COL6A5	1	1
CBFB	1q-Amp	1	1
CBFB	16q-Del	1	1
CBFB	Amp_1q21.3	1	1
CBFB	Amp_1q44	1	1
CBFB	Del_16q24.3	1	1
CDH1	ERBB2	1	1
CDH1	PIK3CA	1	1
CDH1	1q-Amp	1	1
CDKN1B	CCNL2	1	1
CDKN1B	DST	1	1
CTCF	Del_16q24.3	1	1
EPDR1	DST	1	1
EPDR1	ZNF41	1	1
EPDR1	MR1	1	1
EPDR1	TARBP2	1	1
EPDR1	TTPAL	1	1
ERBB2	MLL3	1	1
ERBB2	PIK3R1	1	1
ERBB2	RUNX1	1	1
ERBB2	SMAD2	1	1
ERBB2	TAF1L	1	1
ERBB2	DST	1	1
ERBB2	HRNR	1	1
ERBB2	OR4D10	1	1
ERBB2	ANGPT4	1	1
ERBB2	RIBC1	1	1
ERBB2	TFE3	1	1
FAM20C	ATXN7L1	1	1
FAM20C	CXCR3	1	1
FAM20C	EIF4A2	1	1
FAM20C	SLC35B2	1	1
FBXW7	HLA-DRB5	1	1
FBXW7	SMAD2	1	1
FBXW7	AKD1	1	1
FBXW7	ATXN7L1	1	1
FBXW7	OR4D10	1	1
FBXW7	IRS4	1	1
FBXW7	RIBC1	1	1
FBXW7	TNRC6B	1	1
FBXW7	ZMYM3	1	1
FBXW7	ZNF687	1	1
FOXA1	ABCA8	1	1
FOXA1	CCNL2	1	1
FOXA1	MYH9	1	1
FOXA1	TNRC6B	1	1
GATA3	1q-Amp	1	1
GATA3	Amp_17q23.1	1	1
GPS2	GPRIN2	1	1
GPS2	CASZ1	1	1
HIST1H2BC	OR2T35	1	1
HIST1H2BC	TARBP2	1	1
HIST1H3B	VCPIP1	1	1
HIST1H3B	ZFP36L2	1	1
HIST1H3B	SPEN	1	1
HLA-DRB5	PTHLH	1	1
HLA-DRB5	SMAD2	1	1
HLA-DRB5	TCP10	1	1
HLA-DRB5	ATXN7L1	1	1
HLA-DRB5	GYG2	1	1
HLA-DRB5	HLA-C	1	1
HLA-DRB5	OR4D10	1	1
HLA-DRB5	SHISA4	1	1
HLA-DRB5	OXCT2	1	1
HLA-DRB5	RIBC1	1	1
HLA-DRB5	TFE3	1	1
HLA-DRB5	TNRC6B	1	1
KRAS	PIK3CA	1	1
KRAS	TBX3	1	1
KRAS	SPRR2B	1	1
KRAS	DOCK11	1	1
KRAS	RIBC1	1	1
MAP2K4	PIK3CA	1	1
MAP2K4	ZNF362	1	1
MAP2K4	Del_17p12	1	1
MAP3K1	16p-Amp	1	1
MLL3	SPEN	1	1
MLL3	TGS1	1	1
NCOR1	SMAD2	1	1
NCOR1	DNAH12	1	1
NCOR1	OR4D10	1	1
NCOR1	WDR52	1	1
NCOR1	CABYR	1	1
NCOR1	RBMX	1	1
NCOR1	RHOA	1	1
NCOR1	RIBC1	1	1
NCOR1	SPEN	1	1
NCOR1	TNRC6B	1	1
PIK3CA	SMAD2	1	1
PIK3CA	SPEN	1	1
PIK3CA	Del_16q24.3	1	1
PIK3R1	COL6A5	1	1
PIK3R1	HLA-C	1	1
PIK3R1	SPRR2B	1	1
PIK3R1	C15orf39	1	1
PIWIL1	RPGR	1	1
PIWIL1	SMAD4	1	1
PIWIL1	ATXN2	1	1
PIWIL1	DST	1	1
PIWIL1	UBC	1	1
PIWIL1	WDR52	1	1
PIWIL1	EIF4A2	1	1
PIWIL1	MR1	1	1
PIWIL1	RHOA	1	1
PTEN	OR4D10	1	1
PTEN	Del_10q23.31	1	1
PTHLH	SF3B1	1	1
PTHLH	SHISA4	1	1
PTHLH	KDM6A	1	1
PTHLH	RIBC1	1	1
PTPN22	SMAD4	1	1
PTPN22	VCPIP1	1	1
PTPN22	ABCA8	1	1
PTPN22	CCNL2	1	1
PTPN22	DST	1	1
PTPN22	ERBB3	1	1
PTPN22	NFE2L3	1	1
PTPN22	WDR52	1	1
PTPN22	DLG1	1	1
PTPN22	KDM6A	1	1
PTPN22	MLL4	1	1
PTPN22	MR1	1	1
PTPN22	SPEN	1	1
PTPN22	TGS1	1	1
PTPN22	Amp_20q13.2	1	1
RAB42	CCL13	1	1
RAB42	Amp_1q21.3	1	1
RB1	DST	1	1
RB1	WDR52	1	1
RB1	DOCK11	1	1
RB1	MR1	1	1
RB1	SLC35B2	1	1
RB1	Amp_13q34	1	1
RPGR	ANKRD12	1	1
RPGR	DNAH12	1	1
RPGR	DST	1	1
RPGR	WDR52	1	1
RPGR	DOCK11	1	1
RPGR	MR1	1	1
RPGR	PCNXL2	1	1
RPGR	TCP11	1	1
RUNX1	CCDC82	1	1
SF3B1	FBXO17	1	1
SF3B1	NFE2L3	1	1
SMAD2	DNAH12	1	1
SMAD2	OR4D10	1	1
SMAD2	SHISA4	1	1
SMAD2	SPRR2B	1	1
SMAD2	CASZ1	1	1
SMAD2	PCNXL2	1	1
SMAD2	RIBC1	1	1
SMAD4	CCNL2	1	1
SMAD4	COL6A5	1	1
SMAD4	ERBB3	1	1
SMAD4	FBXO17	1	1
SMAD4	FXYD5	1	1
SMAD4	WDR52	1	1
SMAD4	XBP1	1	1
SMAD4	KDM6A	1	1
SMAD4	MKL1	1	1
SMAD4	MLL4	1	1
SMAD4	MR1	1	1
SMAD4	PCNXL2	1	1
SMAD4	RHBG	1	1
SMAD4	RHOA	1	1
SMAD4	TGS1	1	1
SMAD4	Del_18q23	1	1
TAF1L	AKD1	1	1
TAF1L	ATXN2	1	1
TAF1L	OR4D10	1	1
TAF1L	ZNF41	1	1
TAF1L	DOCK11	1	1
TAF1L	MR1	1	1
TAF1L	NF1	1	1
TAF1L	ZMYM3	1	1
TBX3	RIBC1	1	1
TBX3	1q-Amp	1	1
TCP10	CCL13	1	1
TCP10	GPRIN2	1	1
TCP10	FRMPD2	1	1
TCP10	MUC6	1	1
TCP10	OXCT2	1	1
THEM5	SPRR2B	1	1
THEM5	ANGPT4	1	1
TP53	SPRR2B	1	1
TP53	8q-Amp	1	1
TP53	14q-Del	1	1
TP53	17q-Del	1	1
TP53	4p-Del	1	1
TP53	4q-Del	1	1
TP53	5q-Del	1	1
TP53	Amp_3q26.32	1	1
TP53	Amp_6p23	1	1
TP53	Amp_6q21	1	1
TP53	Amp_8q24.21	1	1
TP53	Amp_10p15.1	1	1
TP53	Amp_10q22.3	1	1
TP53	Amp_12p13.33	1	1
TP53	Amp_13q34	1	1
TP53	Amp_17q12	1	1
TP53	Amp_19p13.12	1	1
TP53	Amp_19q12	1	1
TP53	Del_4p16.3	1	1
TP53	Del_4q35.1	1	1
TP53	Del_5q11.2	1	1
TP53	Del_5q21.3	1	1
TP53	Del_9q34.2	1	1
TP53	Del_10q23.31	1	1
TP53	Del_10q26.3	1	1
TP53	Del_11p15.5	1	1
TP53	Del_14q24.1	1	1
TP53	Del_15q13.1	1	1
TP53	Del_17q21.31	1	1
TP53	Del_18q23	1	1
TP53	Del_19p13.3	1	1
TP53	Del_20p13	1	1
TP53	Del_21q11.2	1	1
VCPIP1	RHOA	1	1
VCPIP1	ZBTB7C	1	1
ZFP36L1	RIBC1	1	1
ZFP36L1	1p-Del	1	1
ZFP36L1	Del_6p25.3	1	1
ZFP36L1	Del_18q23	1	1
ZFP36L2	CCL13	1	1
ZFP36L2	ZBTB7C	1	1
ABCA8	ATXN2	1	1
ABCA8	CCNL2	1	1
ABCA8	FBXO17	1	1
ABCA8	GYG2	1	1
ABCA8	MYH9	1	1
ABCA8	AKT2	1	1
ABCA8	MUC6	1	1
ABCA8	PSIP1	1	1
AKD1	ATXN7L1	1	1
AKD1	COL6A5	1	1
AKD1	DNAH12	1	1
AKD1	HRNR	1	1
AKD1	NFE2L3	1	1
AKD1	OR4D10	1	1
AKD1	PPEF1	1	1
AKD1	WDR52	1	1
AKD1	ATHL1	1	1
AKD1	C15orf39	1	1
AKD1	EIF4A2	1	1
AKD1	MKL1	1	1
AKD1	MR1	1	1
AKD1	NF1	1	1
AKD1	PCNXL2	1	1
AKD1	PSIP1	1	1
AKD1	RHBG	1	1
AKD1	SPEN	1	1
AKD1	16p-Del	1	1
AKD1	Del_10q26.3	1	1
ANKRD12	DST	1	1
ANKRD12	MR1	1	1
ANKRD12	PCNXL2	1	1
ANKRD12	TPP2	1	1
ATXN2	CCNL2	1	1
ATXN2	COL6A5	1	1
ATXN2	DST	1	1
ATXN2	MORN1	1	1
ATXN2	ATHL1	1	1
ATXN2	EIF4A2	1	1
ATXN2	FRMPD2	1	1
ATXN2	KDM6A	1	1
ATXN2	MLL4	1	1
ATXN2	MR1	1	1
ATXN2	PSIP1	1	1
ATXN2	RHBG	1	1
ATXN2	TFE3	1	1
ATXN2	ZMYM3	1	1
ATXN2	ZNF687	1	1
ATXN7L1	FBXO17	1	1
ATXN7L1	MYH9	1	1
ATXN7L1	PPEF1	1	1
ATXN7L1	SHISA4	1	1
ATXN7L1	XBP1	1	1
ATXN7L1	ATHL1	1	1
ATXN7L1	EIF4A2	1	1
ATXN7L1	IRS4	1	1
ATXN7L1	KDM6A	1	1
ATXN7L1	PCNXL2	1	1
ATXN7L1	RHBG	1	1
ATXN7L1	RIBC1	1	1
ATXN7L1	SPEN	1	1
ATXN7L1	TNRC6B	1	1
ATXN7L1	Amp_10p15.1	1	1
ATXN7L1	Del_10q26.3	1	1
CCL13	MORN1	1	1
CCL13	TPP2	1	1
CCNL2	COL6A5	1	1
CCNL2	DST	1	1
CCNL2	ERBB3	1	1
CCNL2	FBXO17	1	1
CCNL2	FXYD5	1	1
CCNL2	GYG2	1	1
CCNL2	MYH9	1	1
CCNL2	XBP1	1	1
CCNL2	AKT2	1	1
CCNL2	EIF4A2	1	1
CCNL2	KDM6A	1	1
CCNL2	MKL1	1	1
CCNL2	MLL4	1	1
CCNL2	MUC6	1	1
CCNL2	PCNXL2	1	1
CCNL2	RBMX	1	1
CCNL2	RHBG	1	1
CCNL2	RIBC1	1	1
CCNL2	SPEN	1	1
CCNL2	TGS1	1	1
CCNL2	TNRC6B	1	1
COL6A5	FBXO17	1	1
COL6A5	MYH9	1	1
COL6A5	WDR52	1	1
COL6A5	CASZ1	1	1
COL6A5	FRMPD2	1	1
COL6A5	KDM6A	1	1
COL6A5	MLL4	1	1
COL6A5	MR1	1	1
COL6A5	NF1	1	1
COL6A5	RHBG	1	1
COL6A5	RHOA	1	1
COL6A5	RIBC1	1	1
DLX6	MLC1	1	1
DLX6	TFE3	1	1
DLX6	4p-Del	1	1
DLX6	4q-Del	1	1
DLX6	Del_4p16.3	1	1
DLX6	Del_5q21.3	1	1
DLX6	Del_12p13.1	1	1
DNAH12	PPEF1	1	1
DNAH12	CASZ1	1	1
DNAH12	DOCK11	1	1
DNAH12	PCNXL2	1	1
DNAH12	TPP2	1	1
DST	SHISA4	1	1
DST	WDR52	1	1
DST	EIF4A2	1	1
DST	IRS4	1	1
DST	KDM6A	1	1
DST	MKL1	1	1
DST	MR1	1	1
DST	RIBC1	1	1
DST	SPEN	1	1
DST	ZNF687	1	1
ERBB3	MORN1	1	1
ERBB3	NFE2L3	1	1
ERBB3	CCDC82	1	1
ERBB3	EIF4A2	1	1
ERBB3	KDM6A	1	1
ERBB3	MLL4	1	1
ERBB3	MR1	1	1
ERBB3	NF1	1	1
ERBB3	RHBG	1	1
ERBB3	RHOA	1	1
ERBB3	TPP2	1	1
ERBB3	18q-Del	1	1
FBXO17	GYG2	1	1
FBXO17	MYH9	1	1
FBXO17	XBP1	1	1
FBXO17	AKT2	1	1
FBXO17	CABYR	1	1
FBXO17	MR1	1	1
FBXO17	MUC6	1	1
FBXO17	RHBG	1	1
FBXO17	RIBC1	1	1
FBXO17	SPEN	1	1
FBXO17	TNRC6B	1	1
FHOD3	ANGPT4	1	1
FHOD3	TFE3	1	1
FHOD3	TNRC6B	1	1
FXYD5	CCDC82	1	1
FXYD5	MKL1	1	1
FXYD5	RHOA	1	1
FXYD5	TCP11	1	1
GPRIN2	SPRR2B	1	1
GPRIN2	CASZ1	1	1
GPRIN2	FRMPD2	1	1
GRHL2	OXCT2	1	1
GYG2	MYH9	1	1
GYG2	XBP1	1	1
GYG2	CASZ1	1	1
GYG2	MUC6	1	1
GYG2	OXCT2	1	1
GYG2	RHBG	1	1
GYG2	RIBC1	1	1
HLA-C	C15orf39	1	1
HLA-C	FRMPD2	1	1
HLA-C	OXCT2	1	1
HLA-C	RHBG	1	1
HLA-C	Amp_6p23	1	1
HRNR	CDC42EP1	1	1
HRNR	PCNXL2	1	1
ICOSLG	MYH9	1	1
ICOSLG	TARBP2	1	1
ICOSLG	16q-Del	1	1
MLC1	BCORL1	1	1
MLC1	CCDC82	1	1
MLC1	RHOA	1	1
MORN1	CCDC82	1	1
MORN1	KDM6A	1	1
MORN1	MLL4	1	1
MORN1	RHBG	1	1
MORN1	ZMYM3	1	1
MORN1	ZNF362	1	1
MORN1	ZNF687	1	1
MYH9	ATHL1	1	1
MYH9	MR1	1	1
MYH9	RHBG	1	1
MYH9	TNRC6B	1	1
MYH9	ZNF687	1	1
NFE2L3	XBP1	1	1
NFE2L3	CASZ1	1	1
NFE2L3	RHBG	1	1
NFE2L3	TTPAL	1	1
OR2T35	SLC35B2	1	1
OR2T35	TARBP2	1	1
OR4D10	SHISA4	1	1
OR4D10	SPRR2B	1	1
OR4D10	ANGPT4	1	1
OR4D10	NF1	1	1
OR4D10	PCNXL2	1	1
OR4D10	RIBC1	1	1
OR4D10	SPEN	1	1
OR4D10	ZBTB7C	1	1
OR6C76	BCORL1	1	1
OR6C76	MKL1	1	1
OR6C76	RHBG	1	1
OR6C76	ZMYM3	1	1
PPEF1	ATHL1	1	1
PPEF1	C15orf39	1	1
PPEF1	CASZ1	1	1
PPEF1	RHBG	1	1
PPEF1	Del_15q13.1	1	1
SHISA4	RIBC1	1	1
SHISA4	TFE3	1	1
SPRR2B	ZNF41	1	1
SPRR2B	FGFR2	1	1
SPRR2B	FRMPD2	1	1
SPRR2B	MR1	1	1
SPRR2B	RIBC1	1	1
SPRR2B	TPP2	1	1
SPRR2B	17p-Del	1	1
SPRR2B	Del_17p12	1	1
UBC	MLL4	1	1
UBC	MR1	1	1
UBC	RHBG	1	1
WDR52	CABYR	1	1
WDR52	DLG1	1	1
WDR52	EIF4A2	1	1
WDR52	MLL4	1	1
WDR52	MR1	1	1
WDR52	PCNXL2	1	1
XBP1	EIF4A2	1	1
XBP1	MR1	1	1
XBP1	PSIP1	1	1
XBP1	RHBG	1	1
XBP1	17q-Amp	1	1
XBP1	Amp_11q13.3	1	1
ZNF41	MR1	1	1
ZNF41	RBMX	1	1
AKT2	RIBC1	1	1
ANGPT4	MLL4	1	1
ANGPT4	NF1	1	1
ATHL1	C15orf39	1	1
ATHL1	RHBG	1	1
ATHL1	Del_8p23.2	1	1
BCORL1	ZNF687	1	1
C15orf39	DOCK11	1	1
C15orf39	IRS4	1	1
C15orf39	OXCT2	1	1
C15orf39	RHBG	1	1
C15orf39	5q-Del	1	1
C15orf39	Del_5q21.3	1	1
CASZ1	FRMPD2	1	1
CASZ1	MR1	1	1
CASZ1	NF1	1	1
CASZ1	PCNXL2	1	1
CASZ1	TPP2	1	1
CCDC82	MKL1	1	1
CCDC82	MLL4	1	1
CCDC82	PCNXL2	1	1
CCDC82	RHOA	1	1
CCDC82	TCP11	1	1
CCDC82	Del_3p21.31	1	1
CDC42EP1	CEP57	1	1
CDC42EP1	CXCR3	1	1
CDC42EP1	TFE3	1	1
CDC42EP1	TTPAL	1	1
CXCR3	TTPAL	1	1
CXCR3	Del_6q27	1	1
DOCK11	TPP2	1	1
EIF4A2	RHBG	1	1
EIF4A2	SDC1	1	1
EIF4A2	TGS1	1	1
FGFR2	MR1	1	1
IRS4	RBMX	1	1
IRS4	TFE3	1	1
KDM6A	MLL4	1	1
KDM6A	MR1	1	1
KDM6A	PCNXL2	1	1
KDM6A	RHBG	1	1
KDM6A	TFE3	1	1
MKL1	RHOA	1	1
MKL1	TCP11	1	1
MKL1	18q-Del	1	1
MLL4	MR1	1	1
MLL4	PCNXL2	1	1
MLL4	RHBG	1	1
MLL4	RHOA	1	1
MLL4	SPEN	1	1
MLL4	TFE3	1	1
MLL4	TGS1	1	1
MLL4	USP36	1	1
MLL4	ZNF687	1	1
MLL4	Del_17q21.31	1	1
MR1	NF1	1	1
MR1	PCNXL2	1	1
MR1	RHBG	1	1
MR1	RIBC1	1	1
MR1	TTPAL	1	1
MR1	ZMYM3	1	1
MUC6	Del_17q21.31	1	1
NF1	RHBG	1	1
OXCT2	SLC35B2	1	1
OXCT2	TFE3	1	1
OXCT2	Del_16q24.3	1	1
PAX2	SLC35B2	1	1
PAX2	ZNF362	1	1
PCNXL2	RHOA	1	1
PCNXL2	RIBC1	1	1
PCNXL2	SPEN	1	1
PSIP1	RHBG	1	1
PSIP1	TGS1	1	1
RBMX	RIBC1	1	1
RBMX	SPEN	1	1
RBMX	TNRC6B	1	1
RHBG	USP36	1	1
RHBG	ZNF687	1	1
RHBG	Del_17q21.31	1	1
RHOA	SDC1	1	1
RHOA	TARBP2	1	1
RHOA	TCP11	1	1
RIBC1	SPEN	1	1
RIBC1	TFE3	1	1
RIBC1	TNRC6B	1	1
RIBC1	TPP2	1	1
SPEN	TGS1	1	1
SPEN	TNRC6B	1	1
TARBP2	TTPAL	1	1
TFE3	TNRC6B	1	1
TFE3	ZNF362	1	1
TTPAL	USP36	1	1
TTPAL	Amp_3q26.32	1	1
USP36	Del_3p21.31	1	1
ZMYM3	ZNF687	1	1
16p-Amp	7p-Amp	1	1
16p-Amp	8q-Amp	1	1
16p-Amp	Amp_8p11.21	1	1
17q-Amp	20q-Amp	1	1
17q-Amp	8p-Del	1	1
17q-Amp	Amp_8q24.21	1	1
17q-Amp	Amp_14q21.1	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q23.1	1	1
17q-Amp	Amp_20q13.2	1	1
17q-Amp	Del_8p23.2	1	1
17q-Amp	Del_17p12	1	1
1q-Amp	16q-Del	1	1
1q-Amp	Amp_1p22.3	1	1
1q-Amp	Amp_1q21.3	1	1
1q-Amp	Amp_1q44	1	1
1q-Amp	Del_16q24.3	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	8q-Amp	1	1
20p-Amp	9p-Del	1	1
20p-Amp	Amp_8q24.21	1	1
20p-Amp	Amp_11q13.3	1	1
20p-Amp	Amp_17q23.1	1	1
20p-Amp	Amp_20q13.2	1	1
20p-Amp	Del_8p23.2	1	1
20p-Amp	Del_9p23	1	1
20p-Amp	Del_21q11.2	1	1
20q-Amp	5p-Amp	1	1
20q-Amp	7q-Amp	1	1
20q-Amp	8q-Amp	1	1
20q-Amp	13q-Del	1	1
20q-Amp	8p-Del	1	1
20q-Amp	9p-Del	1	1
20q-Amp	Amp_3q26.32	1	1
20q-Amp	Amp_8p11.23	1	1
20q-Amp	Amp_8q24.21	1	1
20q-Amp	Amp_11q13.3	1	1
20q-Amp	Amp_12q15	1	1
20q-Amp	Amp_17q23.1	1	1
20q-Amp	Amp_20q13.2	1	1
20q-Amp	Del_8p23.2	1	1
20q-Amp	Del_9p23	1	1
20q-Amp	Del_9p21.3	1	1
20q-Amp	Del_13q14.2	1	1
20q-Amp	Del_21q11.2	1	1
5p-Amp	Amp_1q21.3	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_8p11.23	1	1
7p-Amp	Amp_14q21.1	1	1
7q-Amp	Amp_1q21.3	1	1
7q-Amp	Amp_8p11.23	1	1
7q-Amp	Amp_11p13	1	1
7q-Amp	Amp_19q13.42	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Amp_1p22.3	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8p11.21	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Amp_20q13.2	1	1
8p-Amp	Del_5q11.2	1	1
8q-Amp	Amp_1p22.3	1	1
8q-Amp	Amp_4q13.3	1	1
8q-Amp	Amp_6p23	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8p11.21	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_10p15.1	1	1
8q-Amp	Amp_11q13.3	1	1
8q-Amp	Amp_12q15	1	1
8q-Amp	Amp_14q21.1	1	1
8q-Amp	Amp_17q12	1	1
8q-Amp	Amp_17q23.1	1	1
8q-Amp	Amp_20q13.2	1	1
8q-Amp	Del_8p23.2	1	1
8q-Amp	Del_13q14.2	1	1
11p-Del	11q-Del	1	1
11p-Del	13q-Del	1	1
11p-Del	14q-Del	1	1
11p-Del	15q-Del	1	1
11p-Del	16p-Del	1	1
11p-Del	17p-Del	1	1
11p-Del	18p-Del	1	1
11p-Del	1p-Del	1	1
11p-Del	22q-Del	1	1
11p-Del	4p-Del	1	1
11p-Del	4q-Del	1	1
11p-Del	5q-Del	1	1
11p-Del	8p-Del	1	1
11p-Del	9p-Del	1	1
11p-Del	9q-Del	1	1
11p-Del	Amp_11q13.3	1	1
11p-Del	Amp_11q14.1	1	1
11p-Del	Del_1p36.13	1	1
11p-Del	Del_1p22.1	1	1
11p-Del	Del_3p21.31	1	1
11p-Del	Del_4p16.3	1	1
11p-Del	Del_4q35.1	1	1
11p-Del	Del_5q21.3	1	1
11p-Del	Del_6p25.3	1	1
11p-Del	Del_6q27	1	1
11p-Del	Del_7p22.3	1	1
11p-Del	Del_8p23.2	1	1
11p-Del	Del_9p23	1	1
11p-Del	Del_9p21.3	1	1
11p-Del	Del_9q21.11	1	1
11p-Del	Del_9q34.2	1	1
11p-Del	Del_10q23.31	1	1
11p-Del	Del_10q26.3	1	1
11p-Del	Del_11p15.5	1	1
11p-Del	Del_11q23.3	1	1
11p-Del	Del_13q14.2	1	1
11p-Del	Del_14q24.1	1	1
11p-Del	Del_17p12	1	1
11p-Del	Del_17q21.31	1	1
11p-Del	Del_22q13.32	1	1
11q-Del	13q-Del	1	1
11q-Del	15q-Del	1	1
11q-Del	16p-Del	1	1
11q-Del	16q-Del	1	1
11q-Del	17p-Del	1	1
11q-Del	18p-Del	1	1
11q-Del	1p-Del	1	1
11q-Del	22q-Del	1	1
11q-Del	4p-Del	1	1
11q-Del	6q-Del	1	1
11q-Del	8p-Del	1	1
11q-Del	9p-Del	1	1
11q-Del	9q-Del	1	1
11q-Del	Amp_11q13.3	1	1
11q-Del	Amp_11q14.1	1	1
11q-Del	Amp_17q23.1	1	1
11q-Del	Del_1p36.13	1	1
11q-Del	Del_1p22.1	1	1
11q-Del	Del_3p21.31	1	1
11q-Del	Del_6p25.3	1	1
11q-Del	Del_6q15	1	1
11q-Del	Del_6q27	1	1
11q-Del	Del_7p22.3	1	1
11q-Del	Del_8p23.2	1	1
11q-Del	Del_9p23	1	1
11q-Del	Del_9p21.3	1	1
11q-Del	Del_9q21.11	1	1
11q-Del	Del_9q34.2	1	1
11q-Del	Del_10q23.31	1	1
11q-Del	Del_10q26.3	1	1
11q-Del	Del_11p15.5	1	1
11q-Del	Del_11q23.3	1	1
11q-Del	Del_13q14.2	1	1
11q-Del	Del_14q24.1	1	1
11q-Del	Del_16q24.3	1	1
11q-Del	Del_17p12	1	1
11q-Del	Del_19p13.3	1	1
11q-Del	Del_22q13.32	1	1
13q-Del	14q-Del	1	1
13q-Del	15q-Del	1	1
13q-Del	16p-Del	1	1
13q-Del	16q-Del	1	1
13q-Del	17p-Del	1	1
13q-Del	17q-Del	1	1
13q-Del	18p-Del	1	1
13q-Del	18q-Del	1	1
13q-Del	22q-Del	1	1
13q-Del	4p-Del	1	1
13q-Del	4q-Del	1	1
13q-Del	6q-Del	1	1
13q-Del	8p-Del	1	1
13q-Del	9p-Del	1	1
13q-Del	9q-Del	1	1
13q-Del	Amp_6p23	1	1
13q-Del	Amp_8p11.21	1	1
13q-Del	Amp_8q24.21	1	1
13q-Del	Amp_17q23.1	1	1
13q-Del	Amp_20q13.2	1	1
13q-Del	Del_1p36.13	1	1
13q-Del	Del_1p22.1	1	1
13q-Del	Del_2q37.3	1	1
13q-Del	Del_3p21.31	1	1
13q-Del	Del_4p16.3	1	1
13q-Del	Del_5q11.2	1	1
13q-Del	Del_6p25.3	1	1
13q-Del	Del_6q15	1	1
13q-Del	Del_6q27	1	1
13q-Del	Del_7p22.3	1	1
13q-Del	Del_8p23.2	1	1
13q-Del	Del_9p23	1	1
13q-Del	Del_9p21.3	1	1
13q-Del	Del_9q21.11	1	1
13q-Del	Del_9q34.2	1	1
13q-Del	Del_10q23.31	1	1
13q-Del	Del_10q26.3	1	1
13q-Del	Del_11p15.5	1	1
13q-Del	Del_11q23.3	1	1
13q-Del	Del_12p13.1	1	1
13q-Del	Del_13q14.2	1	1
13q-Del	Del_14q24.1	1	1
13q-Del	Del_15q13.1	1	1
13q-Del	Del_16q24.3	1	1
13q-Del	Del_17p12	1	1
13q-Del	Del_17q21.31	1	1
13q-Del	Del_18q23	1	1
13q-Del	Del_19p13.3	1	1
13q-Del	Del_20p13	1	1
13q-Del	Del_21q11.2	1	1
13q-Del	Del_22q13.32	1	1
14q-Del	15q-Del	1	1
14q-Del	16p-Del	1	1
14q-Del	17p-Del	1	1
14q-Del	18p-Del	1	1
14q-Del	18q-Del	1	1
14q-Del	22q-Del	1	1
14q-Del	4p-Del	1	1
14q-Del	4q-Del	1	1
14q-Del	5q-Del	1	1
14q-Del	6q-Del	1	1
14q-Del	9p-Del	1	1
14q-Del	9q-Del	1	1
14q-Del	Amp_3p25.1	1	1
14q-Del	Amp_12p13.33	1	1
14q-Del	Del_1p36.13	1	1
14q-Del	Del_1p22.1	1	1
14q-Del	Del_2q37.3	1	1
14q-Del	Del_3p21.31	1	1
14q-Del	Del_4p16.3	1	1
14q-Del	Del_4q35.1	1	1
14q-Del	Del_5q11.2	1	1
14q-Del	Del_5q21.3	1	1
14q-Del	Del_6p25.3	1	1
14q-Del	Del_6q15	1	1
14q-Del	Del_6q27	1	1
14q-Del	Del_7p22.3	1	1
14q-Del	Del_9p23	1	1
14q-Del	Del_9p21.3	1	1
14q-Del	Del_9q21.11	1	1
14q-Del	Del_9q34.2	1	1
14q-Del	Del_10q23.31	1	1
14q-Del	Del_10q26.3	1	1
14q-Del	Del_11q23.3	1	1
14q-Del	Del_12q24.31	1	1
14q-Del	Del_13q14.2	1	1
14q-Del	Del_14q24.1	1	1
14q-Del	Del_15q13.1	1	1
14q-Del	Del_17p12	1	1
14q-Del	Del_17q21.31	1	1
14q-Del	Del_18q23	1	1
14q-Del	Del_19p13.3	1	1
14q-Del	Del_19q13.32	1	1
14q-Del	Del_20p13	1	1
14q-Del	Del_22q13.32	1	1
15q-Del	16p-Del	1	1
15q-Del	17q-Del	1	1
15q-Del	22q-Del	1	1
15q-Del	4p-Del	1	1
15q-Del	4q-Del	1	1
15q-Del	5q-Del	1	1
15q-Del	9p-Del	1	1
15q-Del	Amp_1p22.3	1	1
15q-Del	Amp_6p23	1	1
15q-Del	Del_1p36.13	1	1
15q-Del	Del_1p22.1	1	1
15q-Del	Del_2q37.3	1	1
15q-Del	Del_3p21.31	1	1
15q-Del	Del_4p16.3	1	1
15q-Del	Del_4q35.1	1	1
15q-Del	Del_5q11.2	1	1
15q-Del	Del_5q21.3	1	1
15q-Del	Del_6q27	1	1
15q-Del	Del_7p22.3	1	1
15q-Del	Del_9p23	1	1
15q-Del	Del_9p21.3	1	1
15q-Del	Del_9q21.11	1	1
15q-Del	Del_10q26.3	1	1
15q-Del	Del_11p15.5	1	1
15q-Del	Del_11q23.3	1	1
15q-Del	Del_12q23.1	1	1
15q-Del	Del_12q24.31	1	1
15q-Del	Del_13q14.2	1	1
15q-Del	Del_14q24.1	1	1
15q-Del	Del_15q13.1	1	1
15q-Del	Del_17p12	1	1
15q-Del	Del_17q21.31	1	1
15q-Del	Del_19p13.3	1	1
15q-Del	Del_21q11.2	1	1
15q-Del	Del_22q13.32	1	1
16p-Del	16q-Del	1	1
16p-Del	17p-Del	1	1
16p-Del	17q-Del	1	1
16p-Del	1q-Del	1	1
16p-Del	22q-Del	1	1
16p-Del	4p-Del	1	1
16p-Del	4q-Del	1	1
16p-Del	5q-Del	1	1
16p-Del	9p-Del	1	1
16p-Del	Del_2q37.3	1	1
16p-Del	Del_3p21.31	1	1
16p-Del	Del_4q35.1	1	1
16p-Del	Del_5q11.2	1	1
16p-Del	Del_5q21.3	1	1
16p-Del	Del_7p22.3	1	1
16p-Del	Del_9p23	1	1
16p-Del	Del_9p21.3	1	1
16p-Del	Del_9q34.2	1	1
16p-Del	Del_10q23.31	1	1
16p-Del	Del_10q26.3	1	1
16p-Del	Del_11p15.5	1	1
16p-Del	Del_11q23.3	1	1
16p-Del	Del_13q14.2	1	1
16p-Del	Del_14q24.1	1	1
16p-Del	Del_15q13.1	1	1
16p-Del	Del_16q24.3	1	1
16p-Del	Del_17p12	1	1
16p-Del	Del_17q21.31	1	1
16p-Del	Del_19p13.3	1	1
16p-Del	Del_20p13	1	1
16p-Del	Del_22q13.32	1	1
16q-Del	17p-Del	1	1
16q-Del	22q-Del	1	1
16q-Del	6q-Del	1	1
16q-Del	Amp_1q21.3	1	1
16q-Del	Amp_1q44	1	1
16q-Del	Del_1p36.13	1	1
16q-Del	Del_1p22.1	1	1
16q-Del	Del_6q15	1	1
16q-Del	Del_6q27	1	1
16q-Del	Del_11q23.3	1	1
16q-Del	Del_13q14.2	1	1
16q-Del	Del_16q24.3	1	1
16q-Del	Del_17p12	1	1
16q-Del	Del_22q13.32	1	1
17p-Del	17q-Del	1	1
17p-Del	18p-Del	1	1
17p-Del	18q-Del	1	1
17p-Del	22q-Del	1	1
17p-Del	4p-Del	1	1
17p-Del	4q-Del	1	1
17p-Del	5q-Del	1	1
17p-Del	6q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	9p-Del	1	1
17p-Del	9q-Del	1	1
17p-Del	Amp_17q12	1	1
17p-Del	Amp_17q23.1	1	1
17p-Del	Del_1p36.13	1	1
17p-Del	Del_1p22.1	1	1
17p-Del	Del_2q37.3	1	1
17p-Del	Del_3p21.31	1	1
17p-Del	Del_4p16.3	1	1
17p-Del	Del_4q35.1	1	1
17p-Del	Del_5q11.2	1	1
17p-Del	Del_5q21.3	1	1
17p-Del	Del_6q15	1	1
17p-Del	Del_6q27	1	1
17p-Del	Del_7p22.3	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_9p23	1	1
17p-Del	Del_9p21.3	1	1
17p-Del	Del_9q21.11	1	1
17p-Del	Del_9q34.2	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_10q26.3	1	1
17p-Del	Del_11p15.5	1	1
17p-Del	Del_11q23.3	1	1
17p-Del	Del_12p13.1	1	1
17p-Del	Del_12q23.1	1	1
17p-Del	Del_12q24.31	1	1
17p-Del	Del_13q14.2	1	1
17p-Del	Del_14q24.1	1	1
17p-Del	Del_15q13.1	1	1
17p-Del	Del_16q24.3	1	1
17p-Del	Del_17p12	1	1
17p-Del	Del_17q21.31	1	1
17p-Del	Del_18q23	1	1
17p-Del	Del_19p13.3	1	1
17p-Del	Del_19q13.32	1	1
17p-Del	Del_20p13	1	1
17p-Del	Del_21q11.2	1	1
17p-Del	Del_22q13.32	1	1
17q-Del	18p-Del	1	1
17q-Del	18q-Del	1	1
17q-Del	22q-Del	1	1
17q-Del	4p-Del	1	1
17q-Del	4q-Del	1	1
17q-Del	9p-Del	1	1
17q-Del	9q-Del	1	1
17q-Del	Amp_17q12	1	1
17q-Del	Del_1p36.13	1	1
17q-Del	Del_2q37.3	1	1
17q-Del	Del_3p21.31	1	1
17q-Del	Del_4p16.3	1	1
17q-Del	Del_4q35.1	1	1
17q-Del	Del_5q11.2	1	1
17q-Del	Del_7p22.3	1	1
17q-Del	Del_8p23.2	1	1
17q-Del	Del_9p23	1	1
17q-Del	Del_9p21.3	1	1
17q-Del	Del_9q21.11	1	1
17q-Del	Del_9q34.2	1	1
17q-Del	Del_10q26.3	1	1
17q-Del	Del_11p15.5	1	1
17q-Del	Del_12q23.1	1	1
17q-Del	Del_12q24.31	1	1
17q-Del	Del_13q14.2	1	1
17q-Del	Del_14q24.1	1	1
17q-Del	Del_15q13.1	1	1
17q-Del	Del_16q24.3	1	1
17q-Del	Del_17p12	1	1
17q-Del	Del_17q21.31	1	1
17q-Del	Del_18q23	1	1
17q-Del	Del_19p13.3	1	1
17q-Del	Del_20p13	1	1
17q-Del	Del_21q11.2	1	1
17q-Del	Del_22q13.32	1	1
18p-Del	18q-Del	1	1
18p-Del	1p-Del	1	1
18p-Del	22q-Del	1	1
18p-Del	4p-Del	1	1
18p-Del	4q-Del	1	1
18p-Del	9p-Del	1	1
18p-Del	Del_1p36.13	1	1
18p-Del	Del_1p22.1	1	1
18p-Del	Del_2q37.3	1	1
18p-Del	Del_3p21.31	1	1
18p-Del	Del_4p16.3	1	1
18p-Del	Del_4q35.1	1	1
18p-Del	Del_9p23	1	1
18p-Del	Del_9p21.3	1	1
18p-Del	Del_9q21.11	1	1
18p-Del	Del_9q34.2	1	1
18p-Del	Del_10q23.31	1	1
18p-Del	Del_11p15.5	1	1
18p-Del	Del_11q23.3	1	1
18p-Del	Del_12q23.1	1	1
18p-Del	Del_12q24.31	1	1
18p-Del	Del_13q14.2	1	1
18p-Del	Del_14q24.1	1	1
18p-Del	Del_16q24.3	1	1
18p-Del	Del_17p12	1	1
18p-Del	Del_17q21.31	1	1
18p-Del	Del_18q23	1	1
18p-Del	Del_19p13.3	1	1
18p-Del	Del_22q13.32	1	1
18q-Del	1p-Del	1	1
18q-Del	22q-Del	1	1
18q-Del	4p-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	Del_1p36.13	1	1
18q-Del	Del_1p22.1	1	1
18q-Del	Del_2q37.3	1	1
18q-Del	Del_3p21.31	1	1
18q-Del	Del_4p16.3	1	1
18q-Del	Del_6q15	1	1
18q-Del	Del_6q27	1	1
18q-Del	Del_9p23	1	1
18q-Del	Del_9p21.3	1	1
18q-Del	Del_11q23.3	1	1
18q-Del	Del_12q23.1	1	1
18q-Del	Del_12q24.31	1	1
18q-Del	Del_13q14.2	1	1
18q-Del	Del_16q24.3	1	1
18q-Del	Del_17p12	1	1
18q-Del	Del_17q21.31	1	1
18q-Del	Del_18q23	1	1
18q-Del	Del_19p13.3	1	1
18q-Del	Del_20p13	1	1
18q-Del	Del_22q13.32	1	1
1p-Del	1q-Del	1	1
1p-Del	22q-Del	1	1
1p-Del	9p-Del	1	1
1p-Del	Amp_11q14.1	1	1
1p-Del	Del_1p36.13	1	1
1p-Del	Del_1p22.1	1	1
1p-Del	Del_2q37.3	1	1
1p-Del	Del_3p21.31	1	1
1p-Del	Del_9p21.3	1	1
1p-Del	Del_11q23.3	1	1
1p-Del	Del_13q14.2	1	1
1p-Del	Del_16q24.3	1	1
1p-Del	Del_18q23	1	1
1p-Del	Del_22q13.32	1	1
1q-Del	5q-Del	1	1
1q-Del	Del_1p36.13	1	1
1q-Del	Del_2q37.3	1	1
1q-Del	Del_3p21.31	1	1
1q-Del	Del_5q21.3	1	1
1q-Del	Del_12p13.1	1	1
1q-Del	Del_21q11.2	1	1
1q-Del	Del_22q13.32	1	1
22q-Del	4p-Del	1	1
22q-Del	6q-Del	1	1
22q-Del	8p-Del	1	1
22q-Del	9p-Del	1	1
22q-Del	9q-Del	1	1
22q-Del	Del_1p36.13	1	1
22q-Del	Del_1p22.1	1	1
22q-Del	Del_3p21.31	1	1
22q-Del	Del_6p25.3	1	1
22q-Del	Del_6q15	1	1
22q-Del	Del_6q27	1	1
22q-Del	Del_8p23.2	1	1
22q-Del	Del_9p23	1	1
22q-Del	Del_9p21.3	1	1
22q-Del	Del_9q21.11	1	1
22q-Del	Del_9q34.2	1	1
22q-Del	Del_11q23.3	1	1
22q-Del	Del_12p13.1	1	1
22q-Del	Del_13q14.2	1	1
22q-Del	Del_14q24.1	1	1
22q-Del	Del_15q13.1	1	1
22q-Del	Del_16q24.3	1	1
22q-Del	Del_17p12	1	1
22q-Del	Del_17q21.31	1	1
22q-Del	Del_18q23	1	1
22q-Del	Del_19p13.3	1	1
22q-Del	Del_20p13	1	1
22q-Del	Del_22q13.32	1	1
4p-Del	4q-Del	1	1
4p-Del	5q-Del	1	1
4p-Del	8p-Del	1	1
4p-Del	9p-Del	1	1
4p-Del	9q-Del	1	1
4p-Del	Amp_3q26.32	1	1
4p-Del	Amp_6p23	1	1
4p-Del	Amp_6q21	1	1
4p-Del	Amp_10p15.1	1	1
4p-Del	Amp_12p13.33	1	1
4p-Del	Amp_13q34	1	1
4p-Del	Del_1p36.13	1	1
4p-Del	Del_1p22.1	1	1
4p-Del	Del_2q37.3	1	1
4p-Del	Del_3p21.31	1	1
4p-Del	Del_4p16.3	1	1
4p-Del	Del_4q35.1	1	1
4p-Del	Del_5q11.2	1	1
4p-Del	Del_5q21.3	1	1
4p-Del	Del_6p25.3	1	1
4p-Del	Del_8p23.2	1	1
4p-Del	Del_9p23	1	1
4p-Del	Del_9p21.3	1	1
4p-Del	Del_9q34.2	1	1
4p-Del	Del_10q23.31	1	1
4p-Del	Del_10q26.3	1	1
4p-Del	Del_11p15.5	1	1
4p-Del	Del_11q23.3	1	1
4p-Del	Del_12p13.1	1	1
4p-Del	Del_12q23.1	1	1
4p-Del	Del_12q24.31	1	1
4p-Del	Del_13q14.2	1	1
4p-Del	Del_14q24.1	1	1
4p-Del	Del_15q13.1	1	1
4p-Del	Del_17p12	1	1
4p-Del	Del_17q21.31	1	1
4p-Del	Del_18q23	1	1
4p-Del	Del_19p13.3	1	1
4p-Del	Del_19q13.32	1	1
4p-Del	Del_20p13	1	1
4p-Del	Del_21q11.2	1	1
4p-Del	Del_22q13.32	1	1
4q-Del	5q-Del	1	1
4q-Del	9p-Del	1	1
4q-Del	9q-Del	1	1
4q-Del	Amp_3p25.1	1	1
4q-Del	Amp_3q26.32	1	1
4q-Del	Amp_6q21	1	1
4q-Del	Amp_12p13.33	1	1
4q-Del	Del_1p36.13	1	1
4q-Del	Del_1p22.1	1	1
4q-Del	Del_2q37.3	1	1
4q-Del	Del_3p21.31	1	1
4q-Del	Del_4p16.3	1	1
4q-Del	Del_4q35.1	1	1
4q-Del	Del_5q11.2	1	1
4q-Del	Del_5q21.3	1	1
4q-Del	Del_8p23.2	1	1
4q-Del	Del_9p23	1	1
4q-Del	Del_9q21.11	1	1
4q-Del	Del_9q34.2	1	1
4q-Del	Del_10q23.31	1	1
4q-Del	Del_10q26.3	1	1
4q-Del	Del_11p15.5	1	1
4q-Del	Del_11q23.3	1	1
4q-Del	Del_12q23.1	1	1
4q-Del	Del_12q24.31	1	1
4q-Del	Del_13q14.2	1	1
4q-Del	Del_14q24.1	1	1
4q-Del	Del_15q13.1	1	1
4q-Del	Del_17p12	1	1
4q-Del	Del_17q21.31	1	1
4q-Del	Del_19p13.3	1	1
4q-Del	Del_19q13.32	1	1
4q-Del	Del_20p13	1	1
5q-Del	9q-Del	1	1
5q-Del	Amp_1p22.3	1	1
5q-Del	Amp_6q21	1	1
5q-Del	Amp_8q24.21	1	1
5q-Del	Amp_10p15.1	1	1
5q-Del	Amp_11p13	1	1
5q-Del	Amp_12p13.33	1	1
5q-Del	Amp_13q34	1	1
5q-Del	Amp_15q26.3	1	1
5q-Del	Del_1p36.13	1	1
5q-Del	Del_2q37.3	1	1
5q-Del	Del_3p21.31	1	1
5q-Del	Del_4p16.3	1	1
5q-Del	Del_4q35.1	1	1
5q-Del	Del_5q11.2	1	1
5q-Del	Del_5q21.3	1	1
5q-Del	Del_8p23.2	1	1
5q-Del	Del_9q34.2	1	1
5q-Del	Del_10q23.31	1	1
5q-Del	Del_10q26.3	1	1
5q-Del	Del_11p15.5	1	1
5q-Del	Del_12q23.1	1	1
5q-Del	Del_12q24.31	1	1
5q-Del	Del_13q14.2	1	1
5q-Del	Del_14q24.1	1	1
5q-Del	Del_15q13.1	1	1
5q-Del	Del_17p12	1	1
5q-Del	Del_17q21.31	1	1
5q-Del	Del_19p13.3	1	1
5q-Del	Del_19q13.32	1	1
5q-Del	Del_20p13	1	1
6q-Del	9p-Del	1	1
6q-Del	Del_3p21.31	1	1
6q-Del	Del_6p25.3	1	1
6q-Del	Del_6q15	1	1
6q-Del	Del_6q27	1	1
6q-Del	Del_8p23.2	1	1
6q-Del	Del_9p23	1	1
6q-Del	Del_9p21.3	1	1
6q-Del	Del_11q23.3	1	1
6q-Del	Del_13q14.2	1	1
6q-Del	Del_14q24.1	1	1
6q-Del	Del_16q24.3	1	1
6q-Del	Del_17p12	1	1
6q-Del	Del_19p13.3	1	1
6q-Del	Del_21q11.2	1	1
6q-Del	Del_22q13.32	1	1
8p-Del	9p-Del	1	1
8p-Del	Amp_8p11.23	1	1
8p-Del	Amp_8p11.21	1	1
8p-Del	Amp_8q24.21	1	1
8p-Del	Amp_11q13.3	1	1
8p-Del	Amp_17q23.1	1	1
8p-Del	Amp_19p13.12	1	1
8p-Del	Amp_20q13.2	1	1
8p-Del	Del_1p36.13	1	1
8p-Del	Del_3p21.31	1	1
8p-Del	Del_4p16.3	1	1
8p-Del	Del_4q35.1	1	1
8p-Del	Del_6q15	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_9p21.3	1	1
8p-Del	Del_9q34.2	1	1
8p-Del	Del_11p15.5	1	1
8p-Del	Del_11q23.3	1	1
8p-Del	Del_12q23.1	1	1
8p-Del	Del_13q14.2	1	1
8p-Del	Del_14q24.1	1	1
8p-Del	Del_17p12	1	1
8p-Del	Del_18q23	1	1
8p-Del	Del_19p13.3	1	1
8p-Del	Del_19q13.32	1	1
8p-Del	Del_20p13	1	1
8p-Del	Del_22q13.32	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_11q13.3	1	1
9p-Del	Amp_11q14.1	1	1
9p-Del	Amp_17q23.1	1	1
9p-Del	Amp_20q13.2	1	1
9p-Del	Del_1p36.13	1	1
9p-Del	Del_1p22.1	1	1
9p-Del	Del_2q37.3	1	1
9p-Del	Del_3p21.31	1	1
9p-Del	Del_4p16.3	1	1
9p-Del	Del_5q21.3	1	1
9p-Del	Del_6p25.3	1	1
9p-Del	Del_6q15	1	1
9p-Del	Del_6q27	1	1
9p-Del	Del_8p23.2	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_9q21.11	1	1
9p-Del	Del_9q34.2	1	1
9p-Del	Del_10q23.31	1	1
9p-Del	Del_10q26.3	1	1
9p-Del	Del_11p15.5	1	1
9p-Del	Del_11q23.3	1	1
9p-Del	Del_13q14.2	1	1
9p-Del	Del_14q24.1	1	1
9p-Del	Del_15q13.1	1	1
9p-Del	Del_16q24.3	1	1
9p-Del	Del_17p12	1	1
9p-Del	Del_17q21.31	1	1
9p-Del	Del_18q23	1	1
9p-Del	Del_19p13.3	1	1
9p-Del	Del_19q13.32	1	1
9p-Del	Del_22q13.32	1	1
9q-Del	Amp_11q13.3	1	1
9q-Del	Amp_11q14.1	1	1
9q-Del	Del_1p36.13	1	1
9q-Del	Del_2q37.3	1	1
9q-Del	Del_3p21.31	1	1
9q-Del	Del_4p16.3	1	1
9q-Del	Del_5q11.2	1	1
9q-Del	Del_5q21.3	1	1
9q-Del	Del_6p25.3	1	1
9q-Del	Del_6q15	1	1
9q-Del	Del_6q27	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_9q21.11	1	1
9q-Del	Del_9q34.2	1	1
9q-Del	Del_10q23.31	1	1
9q-Del	Del_10q26.3	1	1
9q-Del	Del_11q23.3	1	1
9q-Del	Del_13q14.2	1	1
9q-Del	Del_14q24.1	1	1
9q-Del	Del_15q13.1	1	1
9q-Del	Del_17p12	1	1
9q-Del	Del_17q21.31	1	1
9q-Del	Del_19p13.3	1	1
9q-Del	Del_20p13	1	1
9q-Del	Del_22q13.32	1	1
Amp_1p22.3	Amp_1q21.3	1	1
Amp_1p22.3	Amp_1q44	1	1
Amp_1p22.3	Amp_8p11.21	1	1
Amp_1p22.3	Amp_8q24.21	1	1
Amp_1p22.3	Amp_10p15.1	1	1
Amp_1p22.3	Amp_19q12	1	1
Amp_1p22.3	Del_5q11.2	1	1
Amp_1p22.3	Del_5q21.3	1	1
Amp_1q21.3	Amp_1q44	1	1
Amp_1q21.3	Amp_10p15.1	1	1
Amp_1q21.3	Amp_19q12	1	1
Amp_3p25.1	Amp_3q26.32	1	1
Amp_3p25.1	Amp_6q21	1	1
Amp_3p25.1	Amp_8q24.21	1	1
Amp_3p25.1	Amp_12p13.33	1	1
Amp_3p25.1	Amp_12q15	1	1
Amp_3p25.1	Amp_17q23.1	1	1
Amp_3p25.1	Del_2q37.3	1	1
Amp_3p25.1	Del_3p21.31	1	1
Amp_3p25.1	Del_4p16.3	1	1
Amp_3p25.1	Del_4q35.1	1	1
Amp_3p25.1	Del_7p22.3	1	1
Amp_3p25.1	Del_11p15.5	1	1
Amp_3p25.1	Del_12q23.1	1	1
Amp_3p25.1	Del_12q24.31	1	1
Amp_3p25.1	Del_17q21.31	1	1
Amp_3q26.32	Amp_6p23	1	1
Amp_3q26.32	Amp_6q21	1	1
Amp_3q26.32	Amp_8q24.21	1	1
Amp_3q26.32	Amp_10p15.1	1	1
Amp_3q26.32	Amp_12p13.33	1	1
Amp_3q26.32	Amp_13q34	1	1
Amp_3q26.32	Amp_19p13.12	1	1
Amp_3q26.32	Amp_19q12	1	1
Amp_3q26.32	Del_3p21.31	1	1
Amp_3q26.32	Del_4p16.3	1	1
Amp_3q26.32	Del_4q35.1	1	1
Amp_3q26.32	Del_5q11.2	1	1
Amp_3q26.32	Del_5q21.3	1	1
Amp_3q26.32	Del_8p23.2	1	1
Amp_3q26.32	Del_10q26.3	1	1
Amp_3q26.32	Del_13q14.2	1	1
Amp_3q26.32	Del_15q13.1	1	1
Amp_3q26.32	Del_18q23	1	1
Amp_4q13.3	Amp_12q15	1	1
Amp_6p23	Amp_6q21	1	1
Amp_6p23	Amp_8q24.21	1	1
Amp_6p23	Amp_10p15.1	1	1
Amp_6p23	Amp_12p13.33	1	1
Amp_6p23	Amp_13q34	1	1
Amp_6p23	Amp_15q26.3	1	1
Amp_6p23	Amp_17q23.1	1	1
Amp_6p23	Del_4q35.1	1	1
Amp_6p23	Del_5q11.2	1	1
Amp_6p23	Del_5q21.3	1	1
Amp_6p23	Del_6p25.3	1	1
Amp_6p23	Del_6q27	1	1
Amp_6p23	Del_13q14.2	1	1
Amp_6p23	Del_15q13.1	1	1
Amp_6q21	Amp_10q22.3	1	1
Amp_6q21	Amp_12p13.33	1	1
Amp_6q21	Amp_13q34	1	1
Amp_6q21	Amp_15q26.3	1	1
Amp_6q21	Del_3p21.31	1	1
Amp_6q21	Del_4p16.3	1	1
Amp_6q21	Del_4q35.1	1	1
Amp_6q21	Del_5q11.2	1	1
Amp_6q21	Del_5q21.3	1	1
Amp_6q21	Del_15q13.1	1	1
Amp_8p11.23	Amp_8p11.21	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_11q13.3	1	1
Amp_8p11.23	Amp_20q13.2	1	1
Amp_8p11.23	Del_6q15	1	1
Amp_8p11.23	Del_8p23.2	1	1
Amp_8p11.23	Del_11q23.3	1	1
Amp_8p11.21	Amp_8q24.21	1	1
Amp_8p11.21	Amp_11q13.3	1	1
Amp_8p11.21	Amp_19q12	1	1
Amp_8p11.21	Del_8p23.2	1	1
Amp_8p11.21	Del_13q14.2	1	1
Amp_8q24.21	Amp_10p15.1	1	1
Amp_8q24.21	Amp_10q22.3	1	1
Amp_8q24.21	Amp_11p13	1	1
Amp_8q24.21	Amp_11q13.3	1	1
Amp_8q24.21	Amp_12p13.33	1	1
Amp_8q24.21	Amp_12q15	1	1
Amp_8q24.21	Amp_13q34	1	1
Amp_8q24.21	Amp_14q21.1	1	1
Amp_8q24.21	Amp_17q12	1	1
Amp_8q24.21	Amp_17q23.1	1	1
Amp_8q24.21	Amp_19p13.12	1	1
Amp_8q24.21	Amp_19q12	1	1
Amp_8q24.21	Amp_20q13.2	1	1
Amp_8q24.21	Del_1p36.13	1	1
Amp_8q24.21	Del_2q37.3	1	1
Amp_8q24.21	Del_3p21.31	1	1
Amp_8q24.21	Del_4q35.1	1	1
Amp_8q24.21	Del_5q11.2	1	1
Amp_8q24.21	Del_5q21.3	1	1
Amp_8q24.21	Del_6p25.3	1	1
Amp_8q24.21	Del_8p23.2	1	1
Amp_8q24.21	Del_9q34.2	1	1
Amp_8q24.21	Del_10q26.3	1	1
Amp_8q24.21	Del_11p15.5	1	1
Amp_8q24.21	Del_12q24.31	1	1
Amp_8q24.21	Del_13q14.2	1	1
Amp_8q24.21	Del_19p13.3	1	1
Amp_8q24.21	Del_20p13	1	1
Amp_8q24.21	Del_21q11.2	1	1
Amp_10p15.1	Amp_12p13.33	1	1
Amp_10p15.1	Amp_13q34	1	1
Amp_10p15.1	Amp_19q12	1	1
Amp_10p15.1	Del_2q37.3	1	1
Amp_10p15.1	Del_4p16.3	1	1
Amp_10p15.1	Del_4q35.1	1	1
Amp_10p15.1	Del_5q11.2	1	1
Amp_10p15.1	Del_5q21.3	1	1
Amp_10p15.1	Del_9q34.2	1	1
Amp_10p15.1	Del_10q23.31	1	1
Amp_10p15.1	Del_10q26.3	1	1
Amp_10p15.1	Del_11p15.5	1	1
Amp_10p15.1	Del_15q13.1	1	1
Amp_10p15.1	Del_20p13	1	1
Amp_10q22.3	Amp_19q13.42	1	1
Amp_10q22.3	Del_10q23.31	1	1
Amp_10q22.3	Del_19q13.32	1	1
Amp_11p13	Amp_11q13.3	1	1
Amp_11p13	Amp_11q14.1	1	1
Amp_11p13	Amp_19q12	1	1
Amp_11p13	Amp_19q13.42	1	1
Amp_11p13	Del_11p15.5	1	1
Amp_11q13.3	Amp_11q14.1	1	1
Amp_11q13.3	Amp_12q15	1	1
Amp_11q13.3	Amp_17q12	1	1
Amp_11q13.3	Amp_17q23.1	1	1
Amp_11q13.3	Amp_19q13.42	1	1
Amp_11q13.3	Amp_20q13.2	1	1
Amp_11q13.3	Del_8p23.2	1	1
Amp_11q13.3	Del_9p23	1	1
Amp_11q13.3	Del_9p21.3	1	1
Amp_11q13.3	Del_11q23.3	1	1
Amp_11q13.3	Del_21q11.2	1	1
Amp_11q14.1	Del_1p36.13	1	1
Amp_11q14.1	Del_3p21.31	1	1
Amp_11q14.1	Del_11q23.3	1	1
Amp_12p13.33	Amp_12q15	1	1
Amp_12p13.33	Amp_13q34	1	1
Amp_12p13.33	Amp_19p13.12	1	1
Amp_12p13.33	Amp_19q12	1	1
Amp_12p13.33	Amp_19q13.42	1	1
Amp_12p13.33	Del_2q37.3	1	1
Amp_12p13.33	Del_4q35.1	1	1
Amp_12p13.33	Del_5q11.2	1	1
Amp_12p13.33	Del_5q21.3	1	1
Amp_12p13.33	Del_10q26.3	1	1
Amp_12p13.33	Del_11p15.5	1	1
Amp_12p13.33	Del_14q24.1	1	1
Amp_12p13.33	Del_15q13.1	1	1
Amp_12p13.33	Del_19p13.3	1	1
Amp_12p13.33	Del_20p13	1	1
Amp_12q15	Amp_20q13.2	1	1
Amp_12q15	Del_12q23.1	1	1
Amp_12q15	Del_12q24.31	1	1
Amp_13q34	Amp_19q12	1	1
Amp_13q34	Del_2q37.3	1	1
Amp_13q34	Del_4p16.3	1	1
Amp_13q34	Del_4q35.1	1	1
Amp_13q34	Del_5q11.2	1	1
Amp_13q34	Del_5q21.3	1	1
Amp_13q34	Del_14q24.1	1	1
Amp_13q34	Del_15q13.1	1	1
Amp_14q21.1	Amp_17q23.1	1	1
Amp_14q21.1	Amp_20q13.2	1	1
Amp_14q21.1	Del_22q13.32	1	1
Amp_15q26.3	Del_2q37.3	1	1
Amp_15q26.3	Del_4q35.1	1	1
Amp_15q26.3	Del_9p23	1	1
Amp_15q26.3	Del_9p21.3	1	1
Amp_15q26.3	Del_9q34.2	1	1
Amp_15q26.3	Del_10q23.31	1	1
Amp_15q26.3	Del_10q26.3	1	1
Amp_15q26.3	Del_11p15.5	1	1
Amp_15q26.3	Del_15q13.1	1	1
Amp_15q26.3	Del_17p12	1	1
Amp_15q26.3	Del_19p13.3	1	1
Amp_15q26.3	Del_19q13.32	1	1
Amp_17q12	Amp_17q23.1	1	1
Amp_17q12	Amp_20q13.2	1	1
Amp_17q12	Del_1p36.13	1	1
Amp_17q12	Del_8p23.2	1	1
Amp_17q12	Del_17p12	1	1
Amp_17q12	Del_17q21.31	1	1
Amp_17q23.1	Amp_20q13.2	1	1
Amp_17q23.1	Del_1p36.13	1	1
Amp_17q23.1	Del_3p21.31	1	1
Amp_17q23.1	Del_8p23.2	1	1
Amp_17q23.1	Del_9p23	1	1
Amp_17q23.1	Del_9p21.3	1	1
Amp_17q23.1	Del_11q23.3	1	1
Amp_17q23.1	Del_12p13.1	1	1
Amp_17q23.1	Del_13q14.2	1	1
Amp_17q23.1	Del_17p12	1	1
Amp_17q23.1	Del_17q21.31	1	1
Amp_19p13.12	Amp_19q12	1	1
Amp_19p13.12	Amp_19q13.42	1	1
Amp_19p13.12	Del_4q35.1	1	1
Amp_19p13.12	Del_8p23.2	1	1
Amp_19p13.12	Del_11p15.5	1	1
Amp_19p13.12	Del_15q13.1	1	1
Amp_19p13.12	Del_17q21.31	1	1
Amp_19p13.12	Del_19p13.3	1	1
Amp_19q12	Amp_19q13.42	1	1
Amp_19q12	Del_5q11.2	1	1
Amp_19q12	Del_5q21.3	1	1
Amp_19q12	Del_19p13.3	1	1
Amp_19q12	Del_19q13.32	1	1
Amp_19q13.42	Amp_20q13.2	1	1
Amp_19q13.42	Del_19p13.3	1	1
Amp_20q13.2	Del_2q37.3	1	1
Amp_20q13.2	Del_6q15	1	1
Amp_20q13.2	Del_8p23.2	1	1
Amp_20q13.2	Del_9p23	1	1
Amp_20q13.2	Del_9p21.3	1	1
Amp_20q13.2	Del_10q26.3	1	1
Amp_20q13.2	Del_13q14.2	1	1
Amp_20q13.2	Del_18q23	1	1
Amp_20q13.2	Del_19p13.3	1	1
Amp_20q13.2	Del_19q13.32	1	1
Amp_20q13.2	Del_21q11.2	1	1
Del_1p36.13	Del_1p22.1	1	1
Del_1p36.13	Del_2q37.3	1	1
Del_1p36.13	Del_3p21.31	1	1
Del_1p36.13	Del_4p16.3	1	1
Del_1p36.13	Del_4q35.1	1	1
Del_1p36.13	Del_5q11.2	1	1
Del_1p36.13	Del_5q21.3	1	1
Del_1p36.13	Del_6q15	1	1
Del_1p36.13	Del_6q27	1	1
Del_1p36.13	Del_7q36.1	1	1
Del_1p36.13	Del_8p23.2	1	1
Del_1p36.13	Del_9p23	1	1
Del_1p36.13	Del_9p21.3	1	1
Del_1p36.13	Del_9q21.11	1	1
Del_1p36.13	Del_9q34.2	1	1
Del_1p36.13	Del_10q23.31	1	1
Del_1p36.13	Del_10q26.3	1	1
Del_1p36.13	Del_11p15.5	1	1
Del_1p36.13	Del_11q23.3	1	1
Del_1p36.13	Del_12p13.1	1	1
Del_1p36.13	Del_13q14.2	1	1
Del_1p36.13	Del_14q24.1	1	1
Del_1p36.13	Del_15q13.1	1	1
Del_1p36.13	Del_16q24.3	1	1
Del_1p36.13	Del_17p12	1	1
Del_1p36.13	Del_17q21.31	1	1
Del_1p36.13	Del_18q23	1	1
Del_1p36.13	Del_19p13.3	1	1
Del_1p36.13	Del_19q13.32	1	1
Del_1p36.13	Del_20p13	1	1
Del_1p36.13	Del_21q11.2	1	1
Del_1p36.13	Del_22q13.32	1	1
Del_1p22.1	Del_3p21.31	1	1
Del_1p22.1	Del_4p16.3	1	1
Del_1p22.1	Del_7p22.3	1	1
Del_1p22.1	Del_7q36.1	1	1
Del_1p22.1	Del_9p23	1	1
Del_1p22.1	Del_9p21.3	1	1
Del_1p22.1	Del_10q23.31	1	1
Del_1p22.1	Del_10q26.3	1	1
Del_1p22.1	Del_11p15.5	1	1
Del_1p22.1	Del_11q23.3	1	1
Del_1p22.1	Del_12q23.1	1	1
Del_1p22.1	Del_13q14.2	1	1
Del_1p22.1	Del_14q24.1	1	1
Del_1p22.1	Del_16q24.3	1	1
Del_1p22.1	Del_17p12	1	1
Del_1p22.1	Del_18q23	1	1
Del_1p22.1	Del_19p13.3	1	1
Del_1p22.1	Del_22q13.32	1	1
Del_2q37.3	Del_3p21.31	1	1
Del_2q37.3	Del_4p16.3	1	1
Del_2q37.3	Del_4q35.1	1	1
Del_2q37.3	Del_5q11.2	1	1
Del_2q37.3	Del_5q21.3	1	1
Del_2q37.3	Del_6q27	1	1
Del_2q37.3	Del_9p23	1	1
Del_2q37.3	Del_9p21.3	1	1
Del_2q37.3	Del_9q21.11	1	1
Del_2q37.3	Del_9q34.2	1	1
Del_2q37.3	Del_10q26.3	1	1
Del_2q37.3	Del_11p15.5	1	1
Del_2q37.3	Del_11q23.3	1	1
Del_2q37.3	Del_13q14.2	1	1
Del_2q37.3	Del_14q24.1	1	1
Del_2q37.3	Del_15q13.1	1	1
Del_2q37.3	Del_17p12	1	1
Del_2q37.3	Del_17q21.31	1	1
Del_2q37.3	Del_18q23	1	1
Del_2q37.3	Del_19p13.3	1	1
Del_2q37.3	Del_19q13.32	1	1
Del_2q37.3	Del_20p13	1	1
Del_2q37.3	Del_21q11.2	1	1
Del_2q37.3	Del_22q13.32	1	1
Del_3p21.31	Del_4p16.3	1	1
Del_3p21.31	Del_4q35.1	1	1
Del_3p21.31	Del_5q11.2	1	1
Del_3p21.31	Del_5q21.3	1	1
Del_3p21.31	Del_6p25.3	1	1
Del_3p21.31	Del_6q27	1	1
Del_3p21.31	Del_7p22.3	1	1
Del_3p21.31	Del_7q36.1	1	1
Del_3p21.31	Del_8p23.2	1	1
Del_3p21.31	Del_9p23	1	1
Del_3p21.31	Del_9p21.3	1	1
Del_3p21.31	Del_9q21.11	1	1
Del_3p21.31	Del_9q34.2	1	1
Del_3p21.31	Del_10q23.31	1	1
Del_3p21.31	Del_10q26.3	1	1
Del_3p21.31	Del_11p15.5	1	1
Del_3p21.31	Del_11q23.3	1	1
Del_3p21.31	Del_12p13.1	1	1
Del_3p21.31	Del_12q23.1	1	1
Del_3p21.31	Del_12q24.31	1	1
Del_3p21.31	Del_13q14.2	1	1
Del_3p21.31	Del_14q24.1	1	1
Del_3p21.31	Del_15q13.1	1	1
Del_3p21.31	Del_16q24.3	1	1
Del_3p21.31	Del_17p12	1	1
Del_3p21.31	Del_17q21.31	1	1
Del_3p21.31	Del_18q23	1	1
Del_3p21.31	Del_19p13.3	1	1
Del_3p21.31	Del_19q13.32	1	1
Del_3p21.31	Del_20p13	1	1
Del_3p21.31	Del_21q11.2	1	1
Del_3p21.31	Del_22q13.32	1	1
Del_4p16.3	Del_4q35.1	1	1
Del_4p16.3	Del_5q11.2	1	1
Del_4p16.3	Del_5q21.3	1	1
Del_4p16.3	Del_8p23.2	1	1
Del_4p16.3	Del_9p23	1	1
Del_4p16.3	Del_9p21.3	1	1
Del_4p16.3	Del_10q23.31	1	1
Del_4p16.3	Del_10q26.3	1	1
Del_4p16.3	Del_11p15.5	1	1
Del_4p16.3	Del_11q23.3	1	1
Del_4p16.3	Del_12q23.1	1	1
Del_4p16.3	Del_12q24.31	1	1
Del_4p16.3	Del_13q14.2	1	1
Del_4p16.3	Del_14q24.1	1	1
Del_4p16.3	Del_15q13.1	1	1
Del_4p16.3	Del_17p12	1	1
Del_4p16.3	Del_17q21.31	1	1
Del_4p16.3	Del_18q23	1	1
Del_4p16.3	Del_19p13.3	1	1
Del_4p16.3	Del_19q13.32	1	1
Del_4p16.3	Del_20p13	1	1
Del_4p16.3	Del_21q11.2	1	1
Del_4p16.3	Del_22q13.32	1	1
Del_4q35.1	Del_5q11.2	1	1
Del_4q35.1	Del_5q21.3	1	1
Del_4q35.1	Del_6p25.3	1	1
Del_4q35.1	Del_7p22.3	1	1
Del_4q35.1	Del_7q36.1	1	1
Del_4q35.1	Del_8p23.2	1	1
Del_4q35.1	Del_9p21.3	1	1
Del_4q35.1	Del_9q34.2	1	1
Del_4q35.1	Del_10q23.31	1	1
Del_4q35.1	Del_10q26.3	1	1
Del_4q35.1	Del_11p15.5	1	1
Del_4q35.1	Del_11q23.3	1	1
Del_4q35.1	Del_12q23.1	1	1
Del_4q35.1	Del_12q24.31	1	1
Del_4q35.1	Del_13q14.2	1	1
Del_4q35.1	Del_14q24.1	1	1
Del_4q35.1	Del_15q13.1	1	1
Del_4q35.1	Del_17p12	1	1
Del_4q35.1	Del_17q21.31	1	1
Del_4q35.1	Del_18q23	1	1
Del_4q35.1	Del_19p13.3	1	1
Del_4q35.1	Del_19q13.32	1	1
Del_4q35.1	Del_20p13	1	1
Del_4q35.1	Del_22q13.32	1	1
Del_5q11.2	Del_5q21.3	1	1
Del_5q11.2	Del_6p25.3	1	1
Del_5q11.2	Del_7p22.3	1	1
Del_5q11.2	Del_8p23.2	1	1
Del_5q11.2	Del_9p21.3	1	1
Del_5q11.2	Del_9q21.11	1	1
Del_5q11.2	Del_9q34.2	1	1
Del_5q11.2	Del_10q23.31	1	1
Del_5q11.2	Del_10q26.3	1	1
Del_5q11.2	Del_11p15.5	1	1
Del_5q11.2	Del_12q23.1	1	1
Del_5q11.2	Del_12q24.31	1	1
Del_5q11.2	Del_13q14.2	1	1
Del_5q11.2	Del_14q24.1	1	1
Del_5q11.2	Del_15q13.1	1	1
Del_5q11.2	Del_17p12	1	1
Del_5q11.2	Del_17q21.31	1	1
Del_5q11.2	Del_18q23	1	1
Del_5q11.2	Del_19p13.3	1	1
Del_5q11.2	Del_19q13.32	1	1
Del_5q11.2	Del_20p13	1	1
Del_5q21.3	Del_8p23.2	1	1
Del_5q21.3	Del_9p21.3	1	1
Del_5q21.3	Del_9q34.2	1	1
Del_5q21.3	Del_10q23.31	1	1
Del_5q21.3	Del_10q26.3	1	1
Del_5q21.3	Del_11p15.5	1	1
Del_5q21.3	Del_12p13.1	1	1
Del_5q21.3	Del_12q23.1	1	1
Del_5q21.3	Del_12q24.31	1	1
Del_5q21.3	Del_13q14.2	1	1
Del_5q21.3	Del_14q24.1	1	1
Del_5q21.3	Del_15q13.1	1	1
Del_5q21.3	Del_17p12	1	1
Del_5q21.3	Del_17q21.31	1	1
Del_5q21.3	Del_19p13.3	1	1
Del_5q21.3	Del_19q13.32	1	1
Del_5q21.3	Del_20p13	1	1
Del_6p25.3	Del_6q15	1	1
Del_6p25.3	Del_6q27	1	1
Del_6p25.3	Del_9p23	1	1
Del_6p25.3	Del_9p21.3	1	1
Del_6p25.3	Del_9q34.2	1	1
Del_6p25.3	Del_11p15.5	1	1
Del_6p25.3	Del_11q23.3	1	1
Del_6p25.3	Del_12q24.31	1	1
Del_6p25.3	Del_13q14.2	1	1
Del_6p25.3	Del_14q24.1	1	1
Del_6p25.3	Del_16q24.3	1	1
Del_6p25.3	Del_17p12	1	1
Del_6p25.3	Del_20p13	1	1
Del_6p25.3	Del_22q13.32	1	1
Del_6q15	Del_6q27	1	1
Del_6q15	Del_8p23.2	1	1
Del_6q15	Del_9p23	1	1
Del_6q15	Del_9p21.3	1	1
Del_6q15	Del_9q21.11	1	1
Del_6q15	Del_11p15.5	1	1
Del_6q15	Del_11q23.3	1	1
Del_6q15	Del_13q14.2	1	1
Del_6q15	Del_14q24.1	1	1
Del_6q15	Del_16q24.3	1	1
Del_6q15	Del_17p12	1	1
Del_6q15	Del_18q23	1	1
Del_6q15	Del_19p13.3	1	1
Del_6q15	Del_20p13	1	1
Del_6q15	Del_22q13.32	1	1
Del_6q27	Del_7p22.3	1	1
Del_6q27	Del_8p23.2	1	1
Del_6q27	Del_9p23	1	1
Del_6q27	Del_9p21.3	1	1
Del_6q27	Del_9q21.11	1	1
Del_6q27	Del_11q23.3	1	1
Del_6q27	Del_13q14.2	1	1
Del_6q27	Del_14q24.1	1	1
Del_6q27	Del_15q13.1	1	1
Del_6q27	Del_16q24.3	1	1
Del_6q27	Del_17p12	1	1
Del_6q27	Del_19p13.3	1	1
Del_6q27	Del_20p13	1	1
Del_6q27	Del_22q13.32	1	1
Del_7p22.3	Del_7q36.1	1	1
Del_7p22.3	Del_8p23.2	1	1
Del_7p22.3	Del_10q26.3	1	1
Del_7p22.3	Del_11p15.5	1	1
Del_7p22.3	Del_11q23.3	1	1
Del_7p22.3	Del_13q14.2	1	1
Del_7p22.3	Del_14q24.1	1	1
Del_7p22.3	Del_15q13.1	1	1
Del_7p22.3	Del_17p12	1	1
Del_7p22.3	Del_17q21.31	1	1
Del_7q36.1	Del_12q24.31	1	1
Del_7q36.1	Del_20p13	1	1
Del_8p23.2	Del_9p23	1	1
Del_8p23.2	Del_9p21.3	1	1
Del_8p23.2	Del_9q21.11	1	1
Del_8p23.2	Del_9q34.2	1	1
Del_8p23.2	Del_10q23.31	1	1
Del_8p23.2	Del_10q26.3	1	1
Del_8p23.2	Del_11p15.5	1	1
Del_8p23.2	Del_11q23.3	1	1
Del_8p23.2	Del_12p13.1	1	1
Del_8p23.2	Del_12q23.1	1	1
Del_8p23.2	Del_12q24.31	1	1
Del_8p23.2	Del_13q14.2	1	1
Del_8p23.2	Del_14q24.1	1	1
Del_8p23.2	Del_15q13.1	1	1
Del_8p23.2	Del_16q24.3	1	1
Del_8p23.2	Del_17p12	1	1
Del_8p23.2	Del_18q23	1	1
Del_8p23.2	Del_19p13.3	1	1
Del_8p23.2	Del_19q13.32	1	1
Del_8p23.2	Del_20p13	1	1
Del_8p23.2	Del_21q11.2	1	1
Del_8p23.2	Del_22q13.32	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_9q21.11	1	1
Del_9p23	Del_9q34.2	1	1
Del_9p23	Del_10q23.31	1	1
Del_9p23	Del_10q26.3	1	1
Del_9p23	Del_11p15.5	1	1
Del_9p23	Del_11q23.3	1	1
Del_9p23	Del_13q14.2	1	1
Del_9p23	Del_14q24.1	1	1
Del_9p23	Del_15q13.1	1	1
Del_9p23	Del_17p12	1	1
Del_9p23	Del_17q21.31	1	1
Del_9p23	Del_18q23	1	1
Del_9p23	Del_19p13.3	1	1
Del_9p23	Del_19q13.32	1	1
Del_9p23	Del_20p13	1	1
Del_9p23	Del_22q13.32	1	1
Del_9p21.3	Del_9q21.11	1	1
Del_9p21.3	Del_9q34.2	1	1
Del_9p21.3	Del_10q23.31	1	1
Del_9p21.3	Del_10q26.3	1	1
Del_9p21.3	Del_11p15.5	1	1
Del_9p21.3	Del_11q23.3	1	1
Del_9p21.3	Del_13q14.2	1	1
Del_9p21.3	Del_14q24.1	1	1
Del_9p21.3	Del_15q13.1	1	1
Del_9p21.3	Del_17p12	1	1
Del_9p21.3	Del_17q21.31	1	1
Del_9p21.3	Del_18q23	1	1
Del_9p21.3	Del_19p13.3	1	1
Del_9p21.3	Del_19q13.32	1	1
Del_9p21.3	Del_20p13	1	1
Del_9p21.3	Del_22q13.32	1	1
Del_9q21.11	Del_9q34.2	1	1
Del_9q21.11	Del_10q23.31	1	1
Del_9q21.11	Del_10q26.3	1	1
Del_9q21.11	Del_11q23.3	1	1
Del_9q21.11	Del_13q14.2	1	1
Del_9q21.11	Del_14q24.1	1	1
Del_9q21.11	Del_15q13.1	1	1
Del_9q21.11	Del_17p12	1	1
Del_9q21.11	Del_17q21.31	1	1
Del_9q21.11	Del_18q23	1	1
Del_9q21.11	Del_19p13.3	1	1
Del_9q21.11	Del_20p13	1	1
Del_9q21.11	Del_22q13.32	1	1
Del_9q34.2	Del_10q23.31	1	1
Del_9q34.2	Del_10q26.3	1	1
Del_9q34.2	Del_11p15.5	1	1
Del_9q34.2	Del_11q23.3	1	1
Del_9q34.2	Del_12p13.1	1	1
Del_9q34.2	Del_12q24.31	1	1
Del_9q34.2	Del_13q14.2	1	1
Del_9q34.2	Del_14q24.1	1	1
Del_9q34.2	Del_15q13.1	1	1
Del_9q34.2	Del_17p12	1	1
Del_9q34.2	Del_17q21.31	1	1
Del_9q34.2	Del_19p13.3	1	1
Del_9q34.2	Del_20p13	1	1
Del_9q34.2	Del_22q13.32	1	1
Del_10q23.31	Del_10q26.3	1	1
Del_10q23.31	Del_11p15.5	1	1
Del_10q23.31	Del_11q23.3	1	1
Del_10q23.31	Del_12q24.31	1	1
Del_10q23.31	Del_13q14.2	1	1
Del_10q23.31	Del_14q24.1	1	1
Del_10q23.31	Del_15q13.1	1	1
Del_10q23.31	Del_17p12	1	1
Del_10q23.31	Del_18q23	1	1
Del_10q23.31	Del_19p13.3	1	1
Del_10q23.31	Del_19q13.32	1	1
Del_10q23.31	Del_20p13	1	1
Del_10q26.3	Del_11p15.5	1	1
Del_10q26.3	Del_11q23.3	1	1
Del_10q26.3	Del_12p13.1	1	1
Del_10q26.3	Del_12q24.31	1	1
Del_10q26.3	Del_13q14.2	1	1
Del_10q26.3	Del_14q24.1	1	1
Del_10q26.3	Del_15q13.1	1	1
Del_10q26.3	Del_17p12	1	1
Del_10q26.3	Del_17q21.31	1	1
Del_10q26.3	Del_18q23	1	1
Del_10q26.3	Del_19p13.3	1	1
Del_10q26.3	Del_19q13.32	1	1
Del_10q26.3	Del_20p13	1	1
Del_11p15.5	Del_11q23.3	1	1
Del_11p15.5	Del_12q23.1	1	1
Del_11p15.5	Del_12q24.31	1	1
Del_11p15.5	Del_13q14.2	1	1
Del_11p15.5	Del_14q24.1	1	1
Del_11p15.5	Del_15q13.1	1	1
Del_11p15.5	Del_17p12	1	1
Del_11p15.5	Del_17q21.31	1	1
Del_11p15.5	Del_18q23	1	1
Del_11p15.5	Del_19p13.3	1	1
Del_11p15.5	Del_19q13.32	1	1
Del_11p15.5	Del_20p13	1	1
Del_11p15.5	Del_21q11.2	1	1
Del_11p15.5	Del_22q13.32	1	1
Del_11q23.3	Del_13q14.2	1	1
Del_11q23.3	Del_14q24.1	1	1
Del_11q23.3	Del_15q13.1	1	1
Del_11q23.3	Del_16q24.3	1	1
Del_11q23.3	Del_17p12	1	1
Del_11q23.3	Del_17q21.31	1	1
Del_11q23.3	Del_18q23	1	1
Del_11q23.3	Del_19p13.3	1	1
Del_11q23.3	Del_19q13.32	1	1
Del_11q23.3	Del_20p13	1	1
Del_11q23.3	Del_22q13.32	1	1
Del_12p13.1	Del_13q14.2	1	1
Del_12p13.1	Del_14q24.1	1	1
Del_12p13.1	Del_17p12	1	1
Del_12p13.1	Del_17q21.31	1	1
Del_12p13.1	Del_19p13.3	1	1
Del_12p13.1	Del_19q13.32	1	1
Del_12p13.1	Del_22q13.32	1	1
Del_12q23.1	Del_12q24.31	1	1
Del_12q23.1	Del_14q24.1	1	1
Del_12q23.1	Del_15q13.1	1	1
Del_12q23.1	Del_17p12	1	1
Del_12q23.1	Del_17q21.31	1	1
Del_12q23.1	Del_18q23	1	1
Del_12q23.1	Del_19q13.32	1	1
Del_12q23.1	Del_20p13	1	1
Del_12q24.31	Del_14q24.1	1	1
Del_12q24.31	Del_15q13.1	1	1
Del_12q24.31	Del_17p12	1	1
Del_12q24.31	Del_17q21.31	1	1
Del_12q24.31	Del_18q23	1	1
Del_12q24.31	Del_20p13	1	1
Del_13q14.2	Del_14q24.1	1	1
Del_13q14.2	Del_15q13.1	1	1
Del_13q14.2	Del_16q24.3	1	1
Del_13q14.2	Del_17p12	1	1
Del_13q14.2	Del_17q21.31	1	1
Del_13q14.2	Del_18q23	1	1
Del_13q14.2	Del_19p13.3	1	1
Del_13q14.2	Del_19q13.32	1	1
Del_13q14.2	Del_20p13	1	1
Del_13q14.2	Del_21q11.2	1	1
Del_13q14.2	Del_22q13.32	1	1
Del_14q24.1	Del_15q13.1	1	1
Del_14q24.1	Del_16q24.3	1	1
Del_14q24.1	Del_17p12	1	1
Del_14q24.1	Del_17q21.31	1	1
Del_14q24.1	Del_18q23	1	1
Del_14q24.1	Del_19p13.3	1	1
Del_14q24.1	Del_19q13.32	1	1
Del_14q24.1	Del_20p13	1	1
Del_14q24.1	Del_22q13.32	1	1
Del_15q13.1	Del_17p12	1	1
Del_15q13.1	Del_17q21.31	1	1
Del_15q13.1	Del_18q23	1	1
Del_15q13.1	Del_19p13.3	1	1
Del_15q13.1	Del_20p13	1	1
Del_15q13.1	Del_21q11.2	1	1
Del_15q13.1	Del_22q13.32	1	1
Del_16q24.3	Del_17p12	1	1
Del_16q24.3	Del_22q13.32	1	1
Del_17p12	Del_17q21.31	1	1
Del_17p12	Del_18q23	1	1
Del_17p12	Del_19p13.3	1	1
Del_17p12	Del_19q13.32	1	1
Del_17p12	Del_20p13	1	1
Del_17p12	Del_21q11.2	1	1
Del_17p12	Del_22q13.32	1	1
Del_17q21.31	Del_18q23	1	1
Del_17q21.31	Del_19p13.3	1	1
Del_17q21.31	Del_19q13.32	1	1
Del_17q21.31	Del_20p13	1	1
Del_17q21.31	Del_21q11.2	1	1
Del_17q21.31	Del_22q13.32	1	1
Del_18q23	Del_19p13.3	1	1
Del_18q23	Del_20p13	1	1
Del_18q23	Del_22q13.32	1	1
Del_19p13.3	Del_19q13.32	1	1
Del_19p13.3	Del_20p13	1	1
Del_19p13.3	Del_21q11.2	1	1
Del_19p13.3	Del_22q13.32	1	1
Del_19q13.32	Del_20p13	1	1
Del_20p13	Del_22q13.32	1	1
PIK3CA	Amp_8q24.21	1.36e-06	1
TP53	1q-Amp	1.69e-05	1
CDH1	Amp_8q24.21	2.18e-08	1
PIK3CA	TP53	2.29e-05	1
PIK3CA	Amp_17q23.1	2.59e-05	1
8p-Amp	8p-Del	2.71e-10	1
MAP3K1	TP53	2.78e-05	1
TP53	11q-Del	3.16e-05	1
CDH1	Del_5q21.3	3.2e-05	1
PIK3CA	Del_10q23.31	3.44e-07	1
CDH1	Del_9p21.3	3.59e-05	1
PIK3CA	Amp_10p15.1	4.04e-08	1
CDH1	20q-Amp	4.46e-05	1
TP53	Del_16q24.3	4.58e-17	1
TP53	16q-Del	5.86e-13	1
TP53	Del_11q23.3	7.02e-06	1
CDH1	Amp_3q26.32	8.03e-05	1
PIK3CA	Del_14q24.1	8.23e-08	1
PIK3CA	Amp_15q26.3	8.2e-05	1
CDH1	Amp_20q13.2	8.93e-08	1
PIK3CA	Del_20p13	9.51e-05	1
CDH1	TP53	9.52e-10	1
GATA3	TP53	9.62e-09	1
