name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-A6-2672-01A-01W-0833-10	595	595	0	415	0	coding only	1	28834954	...	178	398	585	6.173063e-06	1.380269e-05	2.028788e-05	-4.692763e+00	...	9	28778764	...	3.127306e-07
TCGA-A6-2674-01A-02W-0831-10	30	30	0	22	0	coding only	1	28834954	...	8	20	29	2.774411e-07	6.936026e-07	1.005724e-06	-5.997521e+00	...	1	28778764	...	3.474784e-08
TCGA-A6-2676-01A-01W-0833-10	820	820	0	588	0	coding only	1	28834954	...	230	529	808	7.976430e-06	1.834579e-05	2.802155e-05	-4.552508e+00	...	49	28778764	...	1.702644e-06
TCGA-A6-2677-01A-01W-0831-10	77	77	0	56	0	coding only	1	28834954	...	21	53	77	7.282828e-07	1.838047e-06	2.670370e-06	-5.573429e+00	...	3	28778764	...	1.042435e-07
TCGA-A6-2678-01A-01W-0831-10	69	69	0	62	0	coding only	1	28834954	...	7	61	68	2.427609e-07	2.115488e-06	2.358249e-06	-5.627410e+00	...	0	28778764	...	0
TCGA-A6-2683-01A-01W-0831-10	104	104	0	73	0	coding only	1	28834954	...	30	70	103	1.040404e-06	2.427609e-06	3.572054e-06	-5.447082e+00	...	3	28778764	...	1.042435e-07
TCGA-A6-3807-01A-01W-0995-10	95	95	0	77	0	coding only	1	28834954	...	18	73	95	6.242424e-07	2.531650e-06	3.294613e-06	-5.482196e+00	...	3	28778764	...	1.042435e-07
TCGA-A6-3808-01A-01W-0995-10	118	118	0	97	0	coding only	1	28834954	...	20	94	117	6.936026e-07	3.259932e-06	4.057575e-06	-5.391733e+00	...	2	28778764	...	6.949569e-08
TCGA-A6-3810-01A-01W-0995-10	121	121	0	95	0	coding only	1	28834954	...	26	91	119	9.016834e-07	3.155892e-06	4.126936e-06	-5.384372e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3514-01A-02W-0831-10	95	95	0	78	0	coding only	1	28834954	...	16	71	93	5.548821e-07	2.462289e-06	3.225252e-06	-5.491436e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3516-01A-02W-0833-10	919	919	0	682	0	coding only	1	28834954	...	236	652	906	8.184511e-06	2.261145e-05	3.142020e-05	-4.502791e+00	...	18	28778764	...	6.254612e-07
TCGA-AA-3517-01A-01W-0831-10	37	37	0	27	0	coding only	1	28834954	...	10	27	37	3.468013e-07	9.363636e-07	1.283165e-06	-5.891718e+00	...	0	28778764	...	0
TCGA-AA-3518-01A-02W-0833-10	581	581	0	424	0	coding only	1	28834954	...	152	397	569	5.271380e-06	1.376801e-05	1.973299e-05	-4.704807e+00	...	20	28778764	...	6.949569e-07
TCGA-AA-3519-01A-02W-0831-10	53	53	0	37	0	coding only	1	28834954	...	16	37	53	5.548821e-07	1.283165e-06	1.838047e-06	-5.735643e+00	...	0	28778764	...	0
TCGA-AA-3520-01A-01W-0831-10	68	68	0	54	0	coding only	1	28834954	...	14	53	67	4.855218e-07	1.838047e-06	2.323569e-06	-5.633844e+00	...	0	28778764	...	0
TCGA-AA-3521-01A-01W-0831-10	55	55	0	43	0	coding only	1	28834954	...	12	41	55	4.161616e-07	1.421885e-06	1.907407e-06	-5.719557e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3522-01A-01W-0831-10	58	58	0	41	0	coding only	1	28834954	...	17	41	58	5.895622e-07	1.421885e-06	2.011448e-06	-5.696491e+00	...	0	28778764	...	0
TCGA-AA-3524-01A-02W-0831-10	52	52	0	38	0	coding only	1	28834954	...	14	37	51	4.855218e-07	1.283165e-06	1.768687e-06	-5.752349e+00	...	0	28778764	...	0
TCGA-AA-3525-01A-02W-0833-10	618	618	0	461	0	coding only	1	28834954	...	155	425	611	5.375420e-06	1.473906e-05	2.118956e-05	-4.673878e+00	...	31	28778764	...	1.077183e-06
TCGA-AA-3526-01A-02W-0831-10	67	67	0	46	0	coding only	1	28834954	...	21	44	66	7.282828e-07	1.525926e-06	2.288889e-06	-5.640375e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3527-01A-01W-0831-10	102	102	0	78	0	coding only	1	28834954	...	24	73	101	8.323232e-07	2.531650e-06	3.502693e-06	-5.455598e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3529-01A-02W-0831-10	63	63	0	44	0	coding only	1	28834954	...	19	43	63	6.589225e-07	1.491246e-06	2.184848e-06	-5.660579e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3530-01A-01W-0995-10	85	85	0	67	0	coding only	1	28834954	...	17	63	83	5.895622e-07	2.184848e-06	2.878451e-06	-5.540841e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-3531-01A-01W-0831-10	73	73	0	56	0	coding only	1	28834954	...	17	56	73	5.895622e-07	1.942087e-06	2.531650e-06	-5.596596e+00	...	0	28778764	...	0
TCGA-AA-3532-01A-01W-0831-10	43	43	0	32	0	coding only	1	28834954	...	10	28	42	3.468013e-07	9.710437e-07	1.456566e-06	-5.836670e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3534-01A-01W-0831-10	64	64	0	51	0	coding only	1	28834954	...	13	50	63	4.508417e-07	1.734007e-06	2.184848e-06	-5.660579e+00	...	0	28778764	...	0
TCGA-AA-3538-01A-01W-0831-10	46	46	0	32	0	coding only	1	28834954	...	14	31	46	4.855218e-07	1.075084e-06	1.595286e-06	-5.797161e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3542-01A-02W-0831-10	412	412	0	327	0	coding only	1	28834954	...	83	316	407	2.878451e-06	1.095892e-05	1.411481e-05	-4.850325e+00	...	8	28778764	...	2.779828e-07
TCGA-AA-3543-01A-01W-0833-10	237	237	0	193	0	coding only	1	28834954	...	43	181	232	1.491246e-06	6.277104e-06	8.045791e-06	-5.094431e+00	...	8	28778764	...	2.779828e-07
TCGA-AA-3544-01A-01W-0831-10	66	66	0	45	0	coding only	1	28834954	...	21	43	66	7.282828e-07	1.491246e-06	2.288889e-06	-5.640375e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3548-01A-01W-0831-10	40	40	0	30	0	coding only	1	28834954	...	10	28	39	3.468013e-07	9.710437e-07	1.352525e-06	-5.868855e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3549-01A-02W-0831-10	78	78	0	64	0	coding only	1	28834954	...	14	61	77	4.855218e-07	2.115488e-06	2.670370e-06	-5.573429e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3552-01A-01W-0831-10	61	61	0	44	0	coding only	1	28834954	...	17	44	61	5.895622e-07	1.525926e-06	2.115488e-06	-5.674589e+00	...	0	28778764	...	0
TCGA-AA-3553-01A-01W-0831-10	35	35	0	28	0	coding only	1	28834954	...	7	27	35	2.427609e-07	9.363636e-07	1.213805e-06	-5.915851e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3554-01A-01W-0833-10	329	329	0	238	0	coding only	1	28834954	...	90	236	328	3.121212e-06	8.184511e-06	1.137508e-05	-4.944045e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3555-01A-01W-0831-10	901	901	0	735	0	coding only	1	28834954	...	163	722	889	5.652861e-06	2.503906e-05	3.083064e-05	-4.511018e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3556-01A-01W-0831-10	43	43	0	28	0	coding only	1	28834954	...	15	28	43	5.202020e-07	9.710437e-07	1.491246e-06	-5.826451e+00	...	0	28778764	...	0
TCGA-AA-3558-01A-01W-0831-10	137	137	0	95	0	coding only	1	28834954	...	42	91	134	1.456566e-06	3.155892e-06	4.647138e-06	-5.332814e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3560-01A-01W-0831-10	59	59	0	47	0	coding only	1	28834954	...	12	46	59	4.161616e-07	1.595286e-06	2.046128e-06	-5.689067e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3561-01A-01W-0831-10	60	60	0	37	0	coding only	1	28834954	...	23	35	60	7.976430e-07	1.213805e-06	2.080808e-06	-5.681768e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3562-01A-02W-0831-10	48	48	0	32	0	coding only	1	28834954	...	16	31	48	5.548821e-07	1.075084e-06	1.664646e-06	-5.778678e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3664-01A-01W-0900-09	168	168	0	128	0	coding only	1	28834954	...	40	118	167	1.387205e-06	4.092256e-06	5.791582e-06	-5.237203e+00	...	8	28778764	...	2.779828e-07
TCGA-AA-3666-01A-02W-0900-09	155	155	0	129	0	coding only	1	28834954	...	26	126	154	9.016834e-07	4.369697e-06	5.340740e-06	-5.272399e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3667-01A-01W-0900-09	74	74	0	60	0	coding only	1	28834954	...	14	52	74	4.855218e-07	1.803367e-06	2.566330e-06	-5.590688e+00	...	8	28778764	...	2.779828e-07
TCGA-AA-3672-01A-01W-0900-09	1815	1814	1	1354	5.509642e-04	coding only	1	28834954	...	459	1174	1806	1.591818e-05	4.071447e-05	6.263232e-05	-4.203202e+00	...	165	28778764	...	5.733394e-06
TCGA-AA-3673-01A-01W-0900-09	83	83	0	67	0	coding only	1	28834954	...	16	60	80	5.548821e-07	2.080808e-06	2.774411e-06	-5.556829e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3678-01A-01W-0900-09	75	75	0	57	0	coding only	1	28834954	...	18	51	75	6.242424e-07	1.768687e-06	2.601010e-06	-5.584858e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3679-01A-02W-0900-09	79	79	0	58	0	coding only	1	28834954	...	21	53	78	7.282828e-07	1.838047e-06	2.705050e-06	-5.567825e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3680-01A-01W-0900-09	119	119	0	93	0	coding only	1	28834954	...	26	85	117	9.016834e-07	2.947811e-06	4.057575e-06	-5.391733e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3681-01A-01W-0900-09	127	127	0	100	0	coding only	1	28834954	...	27	95	127	9.363636e-07	3.294613e-06	4.404377e-06	-5.356116e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3684-01A-02W-0900-09	128	128	0	96	0	coding only	1	28834954	...	32	94	128	1.109764e-06	3.259932e-06	4.439057e-06	-5.352709e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3685-01A-02W-0900-09	82	82	0	68	0	coding only	1	28834954	...	14	62	81	4.855218e-07	2.150168e-06	2.809091e-06	-5.551434e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3688-01A-01W-0900-09	63	63	0	50	0	coding only	1	28834954	...	13	48	63	4.508417e-07	1.664646e-06	2.184848e-06	-5.660579e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3692-01A-01W-0900-09	67	67	0	55	0	coding only	1	28834954	...	12	47	67	4.161616e-07	1.629966e-06	2.323569e-06	-5.633844e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3693-01A-01W-0900-09	145	145	0	110	0	coding only	1	28834954	...	35	103	143	1.213805e-06	3.572054e-06	4.959259e-06	-5.304583e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3695-01A-01W-0900-09	176	176	0	132	0	coding only	1	28834954	...	44	126	175	1.525926e-06	4.369697e-06	6.069023e-06	-5.216881e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3696-01A-01W-0900-09	99	99	0	76	0	coding only	1	28834954	...	23	69	98	7.976430e-07	2.392929e-06	3.398653e-06	-5.468693e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3710-01A-01W-0995-10	1339	1339	0	966	0	coding only	1	28834954	...	372	914	1329	1.290101e-05	3.169764e-05	4.608989e-05	-4.336394e+00	...	37	28778764	...	1.285670e-06
TCGA-AA-3715-01A-01W-0900-09	1977	1977	0	1478	0	coding only	1	28834954	...	494	1358	1950	1.713199e-05	4.709562e-05	6.762626e-05	-4.169885e+00	...	90	28778764	...	3.127306e-06
TCGA-AA-3811-01A-01W-0995-10	1148	1148	0	849	0	coding only	1	28834954	...	293	778	1131	1.016128e-05	2.698114e-05	3.922323e-05	-4.406457e+00	...	56	28778764	...	1.945879e-06
TCGA-AA-3812-01A-01W-0900-09	115	115	0	81	0	coding only	1	28834954	...	34	79	115	1.179124e-06	2.739730e-06	3.988215e-06	-5.399221e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3814-01A-01W-0900-09	110	109	1	75	9.090909e-03	coding only	1	28834954	...	34	71	108	1.179124e-06	2.462289e-06	3.745454e-06	-5.426496e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3818-01A-01W-0900-09	139	139	0	101	0	coding only	1	28834954	...	38	99	139	1.317845e-06	3.433333e-06	4.820538e-06	-5.316904e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3819-01A-01W-0900-09	178	178	0	138	0	coding only	1	28834954	...	39	131	176	1.352525e-06	4.543097e-06	6.103703e-06	-5.214407e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3821-01A-01W-0995-10	814	814	0	621	0	coding only	1	28834954	...	191	512	809	6.623905e-06	1.775623e-05	2.805623e-05	-4.551971e+00	...	102	28778764	...	3.544280e-06
TCGA-AA-3831-01A-01W-0900-09	114	114	0	93	0	coding only	1	28834954	...	21	91	114	7.282828e-07	3.155892e-06	3.953535e-06	-5.403014e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3833-01A-01W-0900-09	541	541	0	378	0	coding only	1	28834954	...	162	364	538	5.618181e-06	1.262357e-05	1.865791e-05	-4.729137e+00	...	11	28778764	...	3.822263e-07
TCGA-AA-3837-01A-01W-0900-09	151	151	0	106	0	coding only	1	28834954	...	45	100	150	1.560606e-06	3.468013e-06	5.202020e-06	-5.283828e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3842-01A-01W-0995-10	87	87	0	59	0	coding only	1	28834954	...	28	53	87	9.710437e-07	1.838047e-06	3.017171e-06	-5.520400e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3844-01A-01W-0995-10	113	113	0	82	0	coding only	1	28834954	...	31	80	113	1.075084e-06	2.774411e-06	3.918855e-06	-5.406841e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3845-01A-01W-0995-10	887	887	0	655	0	coding only	1	28834954	...	230	607	880	7.976430e-06	2.105084e-05	3.051852e-05	-4.515437e+00	...	38	28778764	...	1.320418e-06
TCGA-AA-3846-01A-01W-0995-10	96	95	1	71	1.041667e-02	coding only	1	28834954	...	24	70	95	8.323232e-07	2.427609e-06	3.294613e-06	-5.482196e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3848-01A-01W-0900-09	154	154	0	107	0	coding only	1	28834954	...	47	104	154	1.629966e-06	3.606734e-06	5.340740e-06	-5.272399e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-3850-01A-01W-0995-10	113	113	0	78	0	coding only	1	28834954	...	34	74	111	1.179124e-06	2.566330e-06	3.849495e-06	-5.414596e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-3851-01A-01W-0995-10	97	97	0	70	0	coding only	1	28834954	...	27	63	97	9.363636e-07	2.184848e-06	3.363973e-06	-5.473148e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3852-01A-01W-0900-09	144	144	0	110	0	coding only	1	28834954	...	32	105	142	1.109764e-06	3.641414e-06	4.924579e-06	-5.307631e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3854-01A-01W-0900-09	147	147	0	108	0	coding only	1	28834954	...	39	105	146	1.352525e-06	3.641414e-06	5.063299e-06	-5.295566e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3855-01A-01W-0995-10	137	137	0	102	0	coding only	1	28834954	...	35	96	137	1.213805e-06	3.329293e-06	4.751178e-06	-5.323199e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3856-01A-01W-0900-09	63	63	0	48	0	coding only	1	28834954	...	15	43	62	5.202020e-07	1.491246e-06	2.150168e-06	-5.667528e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-3858-01A-01W-0900-09	66	66	0	47	0	coding only	1	28834954	...	19	36	65	6.589225e-07	1.248485e-06	2.254209e-06	-5.647006e+00	...	10	28778764	...	3.474784e-07
TCGA-AA-3860-01A-02W-0900-09	50	50	0	36	0	coding only	1	28834954	...	14	32	50	4.855218e-07	1.109764e-06	1.734007e-06	-5.760949e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3864-01A-01W-0995-10	2746	2745	1	1951	3.641661e-04	coding only	1	28834954	...	785	1878	2722	2.722390e-05	6.512929e-05	9.439932e-05	-4.025031e+00	...	43	28778764	...	1.494157e-06
TCGA-AA-3866-01A-01W-0995-10	123	123	0	88	0	coding only	1	28834954	...	35	84	122	1.213805e-06	2.913131e-06	4.230976e-06	-5.373559e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-3867-01A-01W-0995-10	91	91	0	75	0	coding only	1	28834954	...	16	69	91	5.548821e-07	2.392929e-06	3.155892e-06	-5.500878e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-3869-01A-01W-0995-10	81	81	0	56	0	coding only	1	28834954	...	22	54	78	7.629629e-07	1.872727e-06	2.705050e-06	-5.567825e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3870-01A-01W-0995-10	126	126	0	95	0	coding only	1	28834954	...	31	91	126	1.075084e-06	3.155892e-06	4.369697e-06	-5.359549e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3872-01A-01W-0995-10	66	66	0	46	0	coding only	1	28834954	...	20	40	66	6.936026e-07	1.387205e-06	2.288889e-06	-5.640375e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3875-01A-01W-0900-09	126	126	0	100	0	coding only	1	28834954	...	26	98	125	9.016834e-07	3.398653e-06	4.335016e-06	-5.363009e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-3877-01A-01W-0995-10	1095	1095	0	765	0	coding only	1	28834954	...	329	718	1090	1.140976e-05	2.490033e-05	3.780134e-05	-4.422493e+00	...	41	28778764	...	1.424662e-06
TCGA-AA-3930-01A-01W-0995-10	171	171	0	120	0	coding only	1	28834954	...	51	109	170	1.768687e-06	3.780134e-06	5.895622e-06	-5.229470e+00	...	10	28778764	...	3.474784e-07
TCGA-AA-3939-01A-01W-0995-10	130	130	0	107	0	coding only	1	28834954	...	22	101	129	7.629629e-07	3.502693e-06	4.473737e-06	-5.349330e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3941-01A-01W-0995-10	115	115	0	96	0	coding only	1	28834954	...	19	89	115	6.589225e-07	3.086532e-06	3.988215e-06	-5.399221e+00	...	7	28778764	...	2.432349e-07
TCGA-AA-3947-01A-01W-0995-10	1717	1717	0	1278	0	coding only	1	28834954	...	432	1102	1693	1.498182e-05	3.821751e-05	5.871346e-05	-4.231262e+00	...	150	28778764	...	5.212177e-06
TCGA-AA-3949-01A-01W-0995-10	938	938	0	681	0	coding only	1	28834954	...	257	653	933	8.912794e-06	2.264613e-05	3.235656e-05	-4.490038e+00	...	19	28778764	...	6.602090e-07
TCGA-AA-3952-01A-01W-0995-10	92	92	0	69	0	coding only	1	28834954	...	23	56	91	7.976430e-07	1.942087e-06	3.155892e-06	-5.500878e+00	...	11	28778764	...	3.822263e-07
TCGA-AA-3955-01A-02W-0995-10	125	125	0	98	0	coding only	1	28834954	...	27	91	124	9.363636e-07	3.155892e-06	4.300336e-06	-5.366498e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3956-01A-02W-0995-10	141	141	0	114	0	coding only	1	28834954	...	27	103	141	9.363636e-07	3.572054e-06	4.889899e-06	-5.310700e+00	...	11	28778764	...	3.822263e-07
TCGA-AA-3966-01A-01W-1073-09	1167	1167	0	886	0	coding only	1	28834954	...	281	771	1157	9.745117e-06	2.673838e-05	4.012491e-05	-4.396586e+00	...	103	28778764	...	3.579028e-06
TCGA-AA-3971-01A-01W-0995-10	86	86	0	70	0	coding only	1	28834954	...	16	41	85	5.548821e-07	1.421885e-06	2.947811e-06	-5.530500e+00	...	28	28778764	...	9.729396e-07
TCGA-AA-3972-01A-01W-0995-10	116	116	0	80	0	coding only	1	28834954	...	36	72	115	1.248485e-06	2.496969e-06	3.988215e-06	-5.399221e+00	...	7	28778764	...	2.432349e-07
TCGA-AA-3973-01A-01W-0995-10	84	84	0	66	0	coding only	1	28834954	...	18	60	84	6.242424e-07	2.080808e-06	2.913131e-06	-5.535640e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3975-01A-01W-0995-10	123	123	0	97	0	coding only	1	28834954	...	26	90	122	9.016834e-07	3.121212e-06	4.230976e-06	-5.373559e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3976-01A-01W-0995-10	96	96	0	69	0	coding only	1	28834954	...	26	63	94	9.016834e-07	2.184848e-06	3.259932e-06	-5.486791e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-3977-01A-01W-0995-10	3680	3677	3	2961	8.152174e-04	coding only	1	28834954	...	710	2927	3655	2.462289e-05	1.015087e-04	1.267559e-04	-3.897032e+00	...	10	28778764	...	3.474784e-07
TCGA-AA-3979-01A-01W-0995-10	161	161	0	127	0	coding only	1	28834954	...	34	99	158	1.179124e-06	3.433333e-06	5.479461e-06	-5.261262e+00	...	25	28778764	...	8.686961e-07
TCGA-AA-3980-01A-02W-0995-10	101	101	0	87	0	coding only	1	28834954	...	14	59	100	4.855218e-07	2.046128e-06	3.468013e-06	-5.459919e+00	...	26	28778764	...	9.034439e-07
TCGA-AA-3982-01A-02W-0995-10	111	111	0	87	0	coding only	1	28834954	...	23	81	110	7.976430e-07	2.809091e-06	3.814814e-06	-5.418527e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-3984-01A-02W-0995-10	4091	4088	3	3245	7.333170e-04	coding only	1	28834954	...	836	3214	4063	2.899259e-05	1.114619e-04	1.409054e-04	-3.851072e+00	...	8	28778764	...	2.779828e-07
TCGA-AA-3986-01A-02W-0995-10	87	87	0	60	0	coding only	1	28834954	...	27	56	86	9.363636e-07	1.942087e-06	2.982491e-06	-5.525421e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-3989-01A-01W-0995-10	128	128	0	100	0	coding only	1	28834954	...	28	76	125	9.710437e-07	2.635690e-06	4.335016e-06	-5.363009e+00	...	20	28778764	...	6.949569e-07
TCGA-AA-3994-01A-01W-1073-09	193	193	0	143	0	coding only	1	28834954	...	50	131	190	1.734007e-06	4.543097e-06	6.589225e-06	-5.181166e+00	...	7	28778764	...	2.432349e-07
TCGA-AA-A004-01A-01W-A00E-09	69	69	0	55	0	coding only	1	28834954	...	14	53	69	4.855218e-07	1.838047e-06	2.392929e-06	-5.621070e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-A00A-01A-01W-A005-10	446	446	0	328	0	coding only	1	28834954	...	116	287	435	4.022895e-06	9.953198e-06	1.508586e-05	-4.821430e+00	...	32	28778764	...	1.111931e-06
TCGA-AA-A00D-01A-01W-A005-10	77	77	0	55	0	coding only	1	28834954	...	20	53	73	6.936026e-07	1.838047e-06	2.531650e-06	-5.596596e+00	...	0	28778764	...	0
TCGA-AA-A00E-01A-01W-A005-10	645	645	0	465	0	coding only	1	28834954	...	174	449	634	6.034343e-06	1.557138e-05	2.198720e-05	-4.657830e+00	...	11	28778764	...	3.822263e-07
TCGA-AA-A00F-01A-01W-A005-10	46	46	0	32	0	coding only	1	28834954	...	14	31	46	4.855218e-07	1.075084e-06	1.595286e-06	-5.797161e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-A00J-01A-02W-A005-10	1154	1154	0	854	0	coding only	1	28834954	...	297	791	1143	1.030000e-05	2.743198e-05	3.963939e-05	-4.401873e+00	...	55	28778764	...	1.911131e-06
TCGA-AA-A00K-01A-02W-A005-10	192	192	0	138	0	coding only	1	28834954	...	54	120	189	1.872727e-06	4.161616e-06	6.554545e-06	-5.183457e+00	...	15	28778764	...	5.212177e-07
TCGA-AA-A00L-01A-01W-A005-10	56	56	0	46	0	coding only	1	28834954	...	10	44	55	3.468013e-07	1.525926e-06	1.907407e-06	-5.719557e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-A00N-01A-02W-A00E-09	4690	4689	1	3715	2.132196e-04	coding only	1	28834954	...	971	3680	4661	3.367441e-05	1.276229e-04	1.616441e-04	-3.791440e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A00O-01A-02W-A00E-09	91	91	0	69	0	coding only	1	28834954	...	21	65	88	7.282828e-07	2.254209e-06	3.051852e-06	-5.515437e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-A00Q-01A-01W-A005-10	36	36	0	23	0	coding only	1	28834954	...	13	23	36	4.508417e-07	7.976430e-07	1.248485e-06	-5.903617e+00	...	0	28778764	...	0
TCGA-AA-A00R-01A-01W-A005-10	432	432	0	299	0	coding only	1	28834954	...	132	289	425	4.577777e-06	1.002256e-05	1.473906e-05	-4.831530e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-A00U-01A-01W-A005-10	87	87	0	64	0	coding only	1	28834954	...	23	61	86	7.976430e-07	2.115488e-06	2.982491e-06	-5.525421e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-A00W-01A-01W-A005-10	28	28	0	24	0	coding only	1	28834954	...	4	22	28	1.387205e-07	7.629629e-07	9.710437e-07	-6.012761e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-A00Z-01A-01W-A005-10	43	43	0	29	0	coding only	1	28834954	...	14	29	43	4.855218e-07	1.005724e-06	1.491246e-06	-5.826451e+00	...	0	28778764	...	0
TCGA-AA-A010-01A-01W-A00E-09	8604	7721	883	6136	1.026267e-01	exome+100bp flanks	2	35716780	...	1574	6061	8510	4.406892e-05	1.696961e-04	2.382634e-04	-3.622943e+00	...	29	32008755	...	9.060021e-07
TCGA-AA-A017-01A-01W-A00E-09	65	65	0	50	0	coding only	1	28834954	...	15	46	64	5.202020e-07	1.595286e-06	2.219528e-06	-5.653739e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A01D-01A-01W-A00E-09	195	195	0	152	0	coding only	1	28834954	...	41	148	193	1.421885e-06	5.132659e-06	6.693265e-06	-5.174362e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A01F-01A-01W-A005-10	61	61	0	48	0	coding only	1	28834954	...	13	48	61	4.508417e-07	1.664646e-06	2.115488e-06	-5.674589e+00	...	0	28778764	...	0
TCGA-AA-A01G-01A-01W-A005-10	73	73	0	50	0	coding only	1	28834954	...	22	48	71	7.629629e-07	1.664646e-06	2.462289e-06	-5.608661e+00	...	1	28778764	...	3.474784e-08
TCGA-AA-A01I-01A-02W-A00E-09	102	102	0	87	0	coding only	1	28834954	...	15	82	101	5.202020e-07	2.843771e-06	3.502693e-06	-5.455598e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A01K-01A-01W-A00E-09	187	187	0	146	0	coding only	1	28834954	...	40	141	186	1.387205e-06	4.889899e-06	6.450504e-06	-5.190406e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-A01P-01A-21W-A096-10	514	514	0	383	0	coding only	1	28834954	...	131	364	510	4.543097e-06	1.262357e-05	1.768687e-05	-4.752349e+00	...	14	28778764	...	4.864698e-07
TCGA-AA-A01Q-01A-01W-A005-10	779	779	0	580	0	coding only	1	28834954	...	197	536	767	6.831986e-06	1.858855e-05	2.659966e-05	-4.575124e+00	...	34	28778764	...	1.181427e-06
TCGA-AA-A01R-01A-21W-A096-10	1729	1728	1	1236	5.783690e-04	coding only	1	28834954	...	489	1194	1711	1.695858e-05	4.140808e-05	5.933771e-05	-4.226669e+00	...	22	28778764	...	7.644526e-07
TCGA-AA-A01S-01A-21W-A096-10	65	65	0	46	0	coding only	1	28834954	...	19	44	65	6.589225e-07	1.525926e-06	2.254209e-06	-5.647006e+00	...	2	28778764	...	6.949569e-08
TCGA-AA-A01T-01A-21W-A096-10	96	96	0	77	0	coding only	1	28834954	...	19	74	96	6.589225e-07	2.566330e-06	3.329293e-06	-5.477648e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A01V-01A-23W-A096-10	136	136	0	96	0	coding only	1	28834954	...	39	90	135	1.352525e-06	3.121212e-06	4.681818e-06	-5.329585e+00	...	6	28778764	...	2.084871e-07
TCGA-AA-A01X-01A-21W-A096-10	66	66	0	47	0	coding only	1	28834954	...	18	43	64	6.242424e-07	1.491246e-06	2.219528e-06	-5.653739e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A01Z-01A-11W-A096-10	108	108	0	79	0	coding only	1	28834954	...	29	72	108	1.005724e-06	2.496969e-06	3.745454e-06	-5.426496e+00	...	7	28778764	...	2.432349e-07
TCGA-AA-A022-01A-21W-A096-10	1282	1281	1	912	7.800312e-04	coding only	1	28834954	...	367	821	1269	1.272761e-05	2.847239e-05	4.400909e-05	-4.356458e+00	...	77	28778764	...	2.675584e-06
TCGA-AA-A024-01A-02W-A00E-09	89	89	0	65	0	coding only	1	28834954	...	24	58	89	8.323232e-07	2.011448e-06	3.086532e-06	-5.510529e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-A029-01A-01W-A00E-09	115	115	0	87	0	coding only	1	28834954	...	28	80	113	9.710437e-07	2.774411e-06	3.918855e-06	-5.406841e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-A02F-01A-01W-A00E-09	66	66	0	48	0	coding only	1	28834954	...	18	42	66	6.242424e-07	1.456566e-06	2.288889e-06	-5.640375e+00	...	5	28778764	...	1.737392e-07
TCGA-AA-A02H-01A-01W-A00E-09	80	80	0	62	0	coding only	1	28834954	...	17	59	79	5.895622e-07	2.046128e-06	2.739730e-06	-5.562292e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A02J-01A-01W-A00E-09	146	146	0	113	0	coding only	1	28834954	...	33	96	145	1.144444e-06	3.329293e-06	5.028619e-06	-5.298551e+00	...	15	28778764	...	5.212177e-07
TCGA-AA-A02O-01A-21W-A096-10	164	164	0	135	0	coding only	1	28834954	...	29	128	163	1.005724e-06	4.439057e-06	5.652861e-06	-5.247732e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A02W-01A-01W-A00E-09	137	137	0	106	0	coding only	1	28834954	...	31	97	136	1.075084e-06	3.363973e-06	4.716498e-06	-5.326380e+00	...	7	28778764	...	2.432349e-07
TCGA-AA-A02Y-01A-43W-A096-10	126	126	0	106	0	coding only	1	28834954	...	20	98	124	6.936026e-07	3.398653e-06	4.300336e-06	-5.366498e+00	...	4	28778764	...	1.389914e-07
TCGA-AA-A03F-01A-11W-A096-10	134	134	0	104	0	coding only	1	28834954	...	30	101	134	1.040404e-06	3.502693e-06	4.647138e-06	-5.332814e+00	...	3	28778764	...	1.042435e-07
TCGA-AA-A03J-01A-21W-A096-10	92	92	0	63	0	coding only	1	28834954	...	29	62	92	1.005724e-06	2.150168e-06	3.190572e-06	-5.496131e+00	...	1	28778764	...	3.474784e-08
TCGA-AY-4070-01A-01W-1073-09	140	140	0	104	0	coding only	1	28834954	...	36	101	139	1.248485e-06	3.502693e-06	4.820538e-06	-5.316904e+00	...	2	28778764	...	6.949569e-08
TCGA-AY-4071-01A-01W-1073-09	111	111	0	80	0	coding only	1	28834954	...	30	78	110	1.040404e-06	2.705050e-06	3.814814e-06	-5.418527e+00	...	2	28778764	...	6.949569e-08
