[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
                                       Clinical feature                        
Time to Death                          "Time to Death"                         
AGE                                    "AGE"                                   
PRIMARY.SITE.OF.DISEASE                "PRIMARY SITE OF DISEASE"               
NEOPLASM.DISEASESTAGE                  "NEOPLASM DISEASESTAGE"                 
PATHOLOGY.T.STAGE                      "PATHOLOGY T STAGE"                     
PATHOLOGY.N.STAGE                      "PATHOLOGY N STAGE"                     
PATHOLOGY.M.STAGE                      "PATHOLOGY M STAGE"                     
GENDER                                 "GENDER"                                
HISTOLOGICAL.TYPE                      "HISTOLOGICAL TYPE"                     
RADIATIONS.RADIATION.REGIMENINDICATION "RADIATIONS RADIATION REGIMENINDICATION"
COMPLETENESS.OF.RESECTION              "COMPLETENESS OF RESECTION"             
NUMBER.OF.LYMPH.NODES                  "NUMBER OF LYMPH NODES"                 
RACE                                   "RACE"                                  
                                       Statistical test           
Time to Death                          "Cox regression test"      
AGE                                    "Spearman correlation test"
PRIMARY.SITE.OF.DISEASE                "Wilcoxon test"            
NEOPLASM.DISEASESTAGE                  "Kruskal-Wallis test"      
PATHOLOGY.T.STAGE                      "Spearman correlation test"
PATHOLOGY.N.STAGE                      "Spearman correlation test"
PATHOLOGY.M.STAGE                      "Kruskal-Wallis test"      
GENDER                                 "Wilcoxon test"            
HISTOLOGICAL.TYPE                      "Kruskal-Wallis test"      
RADIATIONS.RADIATION.REGIMENINDICATION "Wilcoxon test"            
COMPLETENESS.OF.RESECTION              "Kruskal-Wallis test"      
NUMBER.OF.LYMPH.NODES                  "Spearman correlation test"
RACE                                   "Kruskal-Wallis test"      
                                       Significant genes
Time to Death                          "N=0"            
AGE                                    "N=37"           
PRIMARY.SITE.OF.DISEASE                "N=184"          
NEOPLASM.DISEASESTAGE                  "N=105"          
PATHOLOGY.T.STAGE                      "N=188"          
PATHOLOGY.N.STAGE                      "N=353"          
PATHOLOGY.M.STAGE                      "N=514"          
GENDER                                 "N=10"           
HISTOLOGICAL.TYPE                      "N=1380"         
RADIATIONS.RADIATION.REGIMENINDICATION "N=0"            
COMPLETENESS.OF.RESECTION              "N=628"          
NUMBER.OF.LYMPH.NODES                  "N=237"          
RACE                                   "N=19"           
                                       Associated with               
Time to Death                          " "                           
AGE                                    "older"                       
PRIMARY.SITE.OF.DISEASE                "rectum"                      
NEOPLASM.DISEASESTAGE                  " "                           
PATHOLOGY.T.STAGE                      "higher stage"                
PATHOLOGY.N.STAGE                      "higher stage"                
PATHOLOGY.M.STAGE                      " "                           
GENDER                                 "male"                        
HISTOLOGICAL.TYPE                      " "                           
RADIATIONS.RADIATION.REGIMENINDICATION " "                           
COMPLETENESS.OF.RESECTION              " "                           
NUMBER.OF.LYMPH.NODES                  "higher number.of.lymph.nodes"
RACE                                   " "                           
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death                          " "                                                                                       
AGE                                    "N=13"                                                                                    
PRIMARY.SITE.OF.DISEASE                "N=184"                                                                                   
NEOPLASM.DISEASESTAGE                  " "                                                                                       
PATHOLOGY.T.STAGE                      "N=172"                                                                                   
PATHOLOGY.N.STAGE                      "N=240"                                                                                   
PATHOLOGY.M.STAGE                      " "                                                                                       
GENDER                                 "N=10"                                                                                    
HISTOLOGICAL.TYPE                      " "                                                                                       
RADIATIONS.RADIATION.REGIMENINDICATION " "                                                                                       
COMPLETENESS.OF.RESECTION              " "                                                                                       
NUMBER.OF.LYMPH.NODES                  "N=153"                                                                                   
RACE                                   " "                                                                                       
                                       Associated with                      
Time to Death                          " "                           " "    
AGE                                    "younger"                     "N=24" 
PRIMARY.SITE.OF.DISEASE                "colon"                       "N=0"  
NEOPLASM.DISEASESTAGE                  " "                           " "    
PATHOLOGY.T.STAGE                      "lower stage"                 "N=16" 
PATHOLOGY.N.STAGE                      "lower stage"                 "N=113"
PATHOLOGY.M.STAGE                      " "                           " "    
GENDER                                 "female"                      "N=0"  
HISTOLOGICAL.TYPE                      " "                           " "    
RADIATIONS.RADIATION.REGIMENINDICATION " "                           " "    
COMPLETENESS.OF.RESECTION              " "                           " "    
NUMBER.OF.LYMPH.NODES                  "lower number.of.lymph.nodes" "N=84" 
RACE                                   " "                           " "    
