[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTESCA-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/11589242/ESCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/11548800/transformed.cor.cli.txt"

nPatients in clinical file=185, in cluster file=184, common to both=184
[1]  85 184
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           40                           144 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           40                           144 
[1] "AMP PEAK  2(1Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE 
                           93                            91 
  AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE 
                           93                            91 
[1] "AMP PEAK  3(1Q42.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE 
                           96                            88 
  AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE 
                           96                            88 
[1] "AMP PEAK  4(2Q14.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE 
                           60                           124 
  AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE 
                           60                           124 
[1] "AMP PEAK  5(2Q31.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE 
                           60                           124 
  AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE 
                           60                           124 
[1] "AMP PEAK  6(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          128                            56 
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          128                            56 
[1] "AMP PEAK  7(4Q21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE 
                           34                           150 
  AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE 
                           34                           150 
[1] "AMP PEAK  8(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                            98                             86 
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                            98                             86 
[1] "AMP PEAK  9(6P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                           69                           115 
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                           69                           115 
[1] "AMP PEAK 10(6Q23.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE 
                           42                           142 
  AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE 
                           42                           142 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          126                            58 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          126                            58 
[1] "AMP PEAK 12(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          114                            70 
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          114                            70 
[1] "AMP PEAK 13(8P23.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE 
                           52                           132 
  AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE 
                           52                           132 
[1] "AMP PEAK 14(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            85                             99 
  AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE 
                            85                             99 
[1] "AMP PEAK 15(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           145                             39 
  AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE 
                           145                             39 
[1] "AMP PEAK 16(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           40                           144 
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           40                           144 
[1] "AMP PEAK 17(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                           64                           120 
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                           64                           120 
[1] "AMP PEAK 18(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE 
                          52                          132 
  AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE 
                          52                          132 
[1] "AMP PEAK 19(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          50                          134 
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          50                          134 
[1] "AMP PEAK 20(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE 
                           104                             80 
  AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE 
                           104                             80 
[1] "AMP PEAK 21(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE 
                            79                            105 
  AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE 
                            79                            105 
[1] "AMP PEAK 22(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE 
                          51                          133 
  AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE 
                          51                          133 
[1] "AMP PEAK 23(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE 
                            65                            119 
  AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE 
                            65                            119 
[1] "AMP PEAK 24(14Q21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE 
                            61                            123 
  AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE 
                            61                            123 
[1] "AMP PEAK 25(15Q26.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE 
                            58                            126 
  AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE 
                            58                            126 
[1] "AMP PEAK 26(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE 
                          75                          109 
  AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE 
                          75                          109 
[1] "AMP PEAK 27(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE 
                             69                             115 
  AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE 
                             69                             115 
[1] "AMP PEAK 28(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE 
                            59                            125 
  AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE 
                            59                            125 
[1] "AMP PEAK 29(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                            32                            152 
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                            32                            152 
[1] "AMP PEAK 30(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                          54                          130 
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                          54                          130 
[1] "AMP PEAK 31(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         69                         115 
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         69                         115 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            75                            109 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                            75                            109 
[1] "DEL PEAK  2(1P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           64                           120 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                           64                           120 
[1] "DEL PEAK  3(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         17                         167 
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         17                         167 
[1] "DEL PEAK  4(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           59                           125 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           59                           125 
[1] "DEL PEAK  5(2Q33.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           36                           148 
  DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE 
                           36                           148 
[1] "DEL PEAK  6(3P26.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          111                            73 
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          111                            73 
[1] "DEL PEAK  7(3P14.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                          126                            58 
  DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE 
                          126                            58 
[1] "DEL PEAK  8(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                          125                            59 
  DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE 
                          125                            59 
[1] "DEL PEAK  9(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           33                           151 
  DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE 
                           33                           151 
[1] "DEL PEAK 10(3Q26.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            16                            168 
  DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE 
                            16                            168 
[1] "DEL PEAK 11(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          106                            78 
  DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE 
                          106                            78 
[1] "DEL PEAK 12(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          105                            79 
  DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE 
                          105                            79 
[1] "DEL PEAK 13(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE 
                           99                            85 
  DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE 
                           99                            85 
[1] "DEL PEAK 14(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE 
                          112                            72 
  DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE 
                          112                            72 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           74                           110 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           74                           110 
[1] "DEL PEAK 16(6Q16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE 
                           55                           129 
  DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE 
                           55                           129 
[1] "DEL PEAK 17(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                         50                         134 
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                         50                         134 
[1] "DEL PEAK 18(7Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE 
                           56                           128 
  DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE 
                           56                           128 
[1] "DEL PEAK 19(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                           67                           117 
  DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE 
                           67                           117 
[1] "DEL PEAK 20(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                           90                            94 
  DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE 
                           90                            94 
[1] "DEL PEAK 21(8P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE 
                         75                         109 
  DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE 
                         75                         109 
[1] "DEL PEAK 22(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        108                          76 
  DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE 
                        108                          76 
[1] "DEL PEAK 23(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          141                            43 
  DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE 
                          141                            43 
[1] "DEL PEAK 24(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                            54                            130 
  DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE 
                            54                            130 
[1] "DEL PEAK 25(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             52                             132 
  DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE 
                             52                             132 
[1] "DEL PEAK 26(10Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE 
                            46                            138 
  DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE 
                            46                            138 
[1] "DEL PEAK 27(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             65                             119 
  DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE 
                             65                             119 
[1] "DEL PEAK 28(11P15.4) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            79                            105 
  DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE 
                            79                            105 
[1] "DEL PEAK 29(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                          81                          103 
  DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE 
                          81                          103 
[1] "DEL PEAK 30(12Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE 
                            51                            133 
  DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE 
                            51                            133 
[1] "DEL PEAK 31(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             76                             108 
  DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE 
                             76                             108 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            74                            110 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                            74                            110 
[1] "DEL PEAK 33(13Q21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE 
                             69                             115 
  DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE 
                             69                             115 
[1] "DEL PEAK 34(14Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE 
                            51                            133 
  DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE 
                            51                            133 
[1] "DEL PEAK 35(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            63                            121 
  DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE 
                            63                            121 
[1] "DEL PEAK 36(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                            65                            119 
  DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE 
                            65                            119 
[1] "DEL PEAK 37(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                            84                            100 
  DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE 
                            84                            100 
[1] "DEL PEAK 38(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE 
                          86                           98 
  DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE 
                          86                           98 
[1] "DEL PEAK 39(17Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                            41                            143 
  DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE 
                            41                            143 
[1] "DEL PEAK 40(18P11.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE 
                             60                             124 
  DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE 
                             60                             124 
[1] "DEL PEAK 41(18Q12.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE 
                           111                             73 
  DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE 
                           111                             73 
[1] "DEL PEAK 42(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE 
                           119                             65 
  DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE 
                           119                             65 
[1] "DEL PEAK 43(18Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE 
                           112                             72 
  DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE 
                           112                             72 
[1] "DEL PEAK 44(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                            93                             91 
  DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE 
                            93                             91 
[1] "DEL PEAK 45(19Q11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE 
                          48                          136 
  DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE 
                          48                          136 
[1] "DEL PEAK 46(20P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE 
                            33                            151 
  DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE 
                            33                            151 
[1] "DEL PEAK 47(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE 
                           107                             77 
  DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE 
                           107                             77 
[1] "DEL PEAK 48(21Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE 
                           107                             77 
  DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE 
                           107                             77 
[1] "DEL PEAK 49(21Q22.12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE 
                            108                              76 
  DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE 
                            108                              76 
[1] "DEL PEAK 50(22Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                            79                            105 
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                            79                            105 
[1] "DEL PEAK 51(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                           69                           115 
  DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE 
                           69                           115 
[1] "DEL PEAK 52(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                           74                           110 
  DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE 
                           74                           110 
[1] "DEL PEAK 53(XQ11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE 
                           42                           142 
  DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE 
                           42                           142 
[1] "DEL PEAK 54(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE 
                            40                            144 
  DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE 
                            40                            144 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 184 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 184 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       18      7     15
  AMP PEAK  1(1P34.2) WILD-TYPE     47     37     60
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           7                            37
  CLUS_3                          15                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       19      7     14
  AMP PEAK  1(1P34.2) WILD-TYPE     57     25     62
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          19                            57
  CLUS_2                           7                            25
  CLUS_3                          14                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED       12      4      3      4      3
  AMP PEAK  1(1P34.2) WILD-TYPE     34      7     23     27      8
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            34
  CLUS_2                           4                             7
  CLUS_3                           3                            23
  CLUS_4                           4                            27
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        9     13      4
  AMP PEAK  1(1P34.2) WILD-TYPE     30     61      8
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          13                            61
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       20     17      3
  AMP PEAK  1(1P34.2) WILD-TYPE     64     70      9
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            64
  CLUS_2                          17                            70
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       17      4     10      9
  AMP PEAK  1(1P34.2) WILD-TYPE     45     22     52     24
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            22
  CLUS_3                          10                            52
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED       17     13      7      3
  AMP PEAK  1(1P34.2) WILD-TYPE     49     53     28      8
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          13                            53
  CLUS_3                           7                            28
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED       17      4     19
  AMP PEAK  1(1P34.2) WILD-TYPE     45     18     75
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            18
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       37     12     44
  AMP PEAK  2(1Q23.3) WILD-TYPE     28     32     31
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          37                            28
  CLUS_2                          12                            32
  CLUS_3                          44                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       40     11     42
  AMP PEAK  2(1Q23.3) WILD-TYPE     36     21     34
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          40                            36
  CLUS_2                          11                            21
  CLUS_3                          42                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1Q23.3) MUTATED       24      6     19     12      4
  AMP PEAK  2(1Q23.3) WILD-TYPE     22      5      7     19      7
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          24                            22
  CLUS_2                           6                             5
  CLUS_3                          19                             7
  CLUS_4                          12                            19
  CLUS_5                           4                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       19     40      6
  AMP PEAK  2(1Q23.3) WILD-TYPE     20     34      6
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          19                            20
  CLUS_2                          40                            34
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       42     47      3
  AMP PEAK  2(1Q23.3) WILD-TYPE     42     40      9
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          42                            42
  CLUS_2                          47                            40
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q23.3) MUTATED       33     11     31     17
  AMP PEAK  2(1Q23.3) WILD-TYPE     29     15     31     16
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          11                            15
  CLUS_3                          31                            31
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q23.3) MUTATED       35     40     10      5
  AMP PEAK  2(1Q23.3) WILD-TYPE     31     26     25      6
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          35                            31
  CLUS_2                          40                            26
  CLUS_3                          10                            25
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q23.3) MUTATED       33     10     47
  AMP PEAK  2(1Q23.3) WILD-TYPE     29     12     47
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q23.3) MUTATED AMP PEAK  2(1Q23.3) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          10                            12
  CLUS_3                          47                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q42.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       39     10     47
  AMP PEAK  3(1Q42.3) WILD-TYPE     26     34     28
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          39                            26
  CLUS_2                          10                            34
  CLUS_3                          47                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       40     13     43
  AMP PEAK  3(1Q42.3) WILD-TYPE     36     19     33
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          40                            36
  CLUS_2                          13                            19
  CLUS_3                          43                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q42.3) MUTATED       21      6     19     13      5
  AMP PEAK  3(1Q42.3) WILD-TYPE     25      5      7     18      6
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          21                            25
  CLUS_2                           6                             5
  CLUS_3                          19                             7
  CLUS_4                          13                            18
  CLUS_5                           5                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       16     42      6
  AMP PEAK  3(1Q42.3) WILD-TYPE     23     32      6
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          16                            23
  CLUS_2                          42                            32
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       42     49      4
  AMP PEAK  3(1Q42.3) WILD-TYPE     42     38      8
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          42                            42
  CLUS_2                          49                            38
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q42.3) MUTATED       34      9     35     17
  AMP PEAK  3(1Q42.3) WILD-TYPE     28     17     27     16
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          34                            28
  CLUS_2                           9                            17
  CLUS_3                          35                            27
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q42.3) MUTATED       36     40     13      5
  AMP PEAK  3(1Q42.3) WILD-TYPE     30     26     22      6
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          36                            30
  CLUS_2                          40                            26
  CLUS_3                          13                            22
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q42.3) MUTATED       35      8     51
  AMP PEAK  3(1Q42.3) WILD-TYPE     27     14     43
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q42.3) MUTATED AMP PEAK  3(1Q42.3) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           8                            14
  CLUS_3                          51                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(2Q14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       18     13     29
  AMP PEAK  4(2Q14.2) WILD-TYPE     47     31     46
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                          13                            31
  CLUS_3                          29                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       20     12     28
  AMP PEAK  4(2Q14.2) WILD-TYPE     56     20     48
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          20                            56
  CLUS_2                          12                            20
  CLUS_3                          28                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2Q14.2) MUTATED       13      3     12      9      4
  AMP PEAK  4(2Q14.2) WILD-TYPE     33      8     14     22      7
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          13                            33
  CLUS_2                           3                             8
  CLUS_3                          12                            14
  CLUS_4                           9                            22
  CLUS_5                           4                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED        8     27      6
  AMP PEAK  4(2Q14.2) WILD-TYPE     31     47      6
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                           8                            31
  CLUS_2                          27                            47
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       23     34      3
  AMP PEAK  4(2Q14.2) WILD-TYPE     61     53      9
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          23                            61
  CLUS_2                          34                            53
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q14.2) MUTATED       15      9     26     10
  AMP PEAK  4(2Q14.2) WILD-TYPE     47     17     36     23
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            17
  CLUS_3                          26                            36
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q14.2) MUTATED       18     28     10      3
  AMP PEAK  4(2Q14.2) WILD-TYPE     48     38     25      8
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          18                            48
  CLUS_2                          28                            38
  CLUS_3                          10                            25
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q14.2) MUTATED       16      8     35
  AMP PEAK  4(2Q14.2) WILD-TYPE     46     14     59
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q14.2) MUTATED AMP PEAK  4(2Q14.2) WILD-TYPE
  CLUS_1                          16                            46
  CLUS_2                           8                            14
  CLUS_3                          35                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(2Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       21      8     31
  AMP PEAK  5(2Q31.1) WILD-TYPE     44     36     44
D5V1, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          21                            44
  CLUS_2                           8                            36
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       22      8     30
  AMP PEAK  5(2Q31.1) WILD-TYPE     54     24     46
D5V2, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          22                            54
  CLUS_2                           8                            24
  CLUS_3                          30                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q31.1) MUTATED       13      4     12     10      3
  AMP PEAK  5(2Q31.1) WILD-TYPE     33      7     14     21      8
D5V3, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          13                            33
  CLUS_2                           4                             7
  CLUS_3                          12                            14
  CLUS_4                          10                            21
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED        9     27      6
  AMP PEAK  5(2Q31.1) WILD-TYPE     30     47      6
D5V4, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          27                            47
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       24     32      4
  AMP PEAK  5(2Q31.1) WILD-TYPE     60     55      8
D5V5, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          24                            60
  CLUS_2                          32                            55
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q31.1) MUTATED       19      6     26      9
  AMP PEAK  5(2Q31.1) WILD-TYPE     43     20     36     24
D5V6, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           6                            20
  CLUS_3                          26                            36
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q31.1) MUTATED       21     28      9      1
  AMP PEAK  5(2Q31.1) WILD-TYPE     45     38     26     10
D5V7, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          28                            38
  CLUS_3                           9                            26
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q31.1) MUTATED       19      6     34
  AMP PEAK  5(2Q31.1) WILD-TYPE     43     16     60
D5V8, multiclass
        clus
vv       AMP PEAK  5(2Q31.1) MUTATED AMP PEAK  5(2Q31.1) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           6                            16
  CLUS_3                          34                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       40     14     74
  AMP PEAK  6(3Q26.2) WILD-TYPE     25     30      1
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          40                            25
  CLUS_2                          14                            30
  CLUS_3                          74                             1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       41     19     68
  AMP PEAK  6(3Q26.2) WILD-TYPE     35     13      8
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          41                            35
  CLUS_2                          19                            13
  CLUS_3                          68                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       21      7     26     26      9
  AMP PEAK  6(3Q26.2) WILD-TYPE     25      4      0      5      2
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          21                            25
  CLUS_2                           7                             4
  CLUS_3                          26                             0
  CLUS_4                          26                             5
  CLUS_5                           9                             2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       18     67      4
  AMP PEAK  6(3Q26.2) WILD-TYPE     21      7      8
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          18                            21
  CLUS_2                          67                             7
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       44     75      8
  AMP PEAK  6(3Q26.2) WILD-TYPE     40     12      4
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          44                            40
  CLUS_2                          75                            12
  CLUS_3                           8                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       33     13     56     25
  AMP PEAK  6(3Q26.2) WILD-TYPE     29     13      6      8
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          13                            13
  CLUS_3                          56                             6
  CLUS_4                          25                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       35     62     23      6
  AMP PEAK  6(3Q26.2) WILD-TYPE     31      4     12      5
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          35                            31
  CLUS_2                          62                             4
  CLUS_3                          23                            12
  CLUS_4                           6                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       35     11     80
  AMP PEAK  6(3Q26.2) WILD-TYPE     27     11     14
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                          11                            11
  CLUS_3                          80                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(4Q21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       10      6     18
  AMP PEAK  7(4Q21.1) WILD-TYPE     55     38     57
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          10                            55
  CLUS_2                           6                            38
  CLUS_3                          18                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       12      7     15
  AMP PEAK  7(4Q21.1) WILD-TYPE     64     25     61
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          12                            64
  CLUS_2                           7                            25
  CLUS_3                          15                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4Q21.1) MUTATED        7      2      3      4      6
  AMP PEAK  7(4Q21.1) WILD-TYPE     39      9     23     27      5
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           7                            39
  CLUS_2                           2                             9
  CLUS_3                           3                            23
  CLUS_4                           4                            27
  CLUS_5                           6                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED        7     14      1
  AMP PEAK  7(4Q21.1) WILD-TYPE     32     60     11
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           7                            32
  CLUS_2                          14                            60
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED       15     17      2
  AMP PEAK  7(4Q21.1) WILD-TYPE     69     70     10
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          15                            69
  CLUS_2                          17                            70
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q21.1) MUTATED        8      7     12      7
  AMP PEAK  7(4Q21.1) WILD-TYPE     54     19     50     26
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           8                            54
  CLUS_2                           7                            19
  CLUS_3                          12                            50
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4Q21.1) MUTATED       11     13      8      2
  AMP PEAK  7(4Q21.1) WILD-TYPE     55     53     27      9
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          13                            53
  CLUS_3                           8                            27
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4Q21.1) MUTATED        9      6     19
  AMP PEAK  7(4Q21.1) WILD-TYPE     53     16     75
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q21.1) MUTATED AMP PEAK  7(4Q21.1) WILD-TYPE
  CLUS_1                           9                            53
  CLUS_2                           6                            16
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       31     11     56
  AMP PEAK  8(5P15.33) WILD-TYPE     34     33     19
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           31                             34
  CLUS_2                           11                             33
  CLUS_3                           56                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       33     15     50
  AMP PEAK  8(5P15.33) WILD-TYPE     43     17     26
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           33                             43
  CLUS_2                           15                             17
  CLUS_3                           50                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P15.33) MUTATED       21      5     20     21      6
  AMP PEAK  8(5P15.33) WILD-TYPE     25      6      6     10      5
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           21                             25
  CLUS_2                            5                              6
  CLUS_3                           20                              6
  CLUS_4                           21                             10
  CLUS_5                            6                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       18     51      4
  AMP PEAK  8(5P15.33) WILD-TYPE     21     23      8
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           18                             21
  CLUS_2                           51                             23
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       34     60      4
  AMP PEAK  8(5P15.33) WILD-TYPE     50     27      8
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           34                             50
  CLUS_2                           60                             27
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P15.33) MUTATED       24     11     40     23
  AMP PEAK  8(5P15.33) WILD-TYPE     38     15     22     10
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           24                             38
  CLUS_2                           11                             15
  CLUS_3                           40                             22
  CLUS_4                           23                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P15.33) MUTATED       27     46     19      6
  AMP PEAK  8(5P15.33) WILD-TYPE     39     20     16      5
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           46                             20
  CLUS_3                           19                             16
  CLUS_4                            6                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P15.33) MUTATED       24     11     63
  AMP PEAK  8(5P15.33) WILD-TYPE     38     11     31
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           24                             38
  CLUS_2                           11                             11
  CLUS_3                           63                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35     11     23
  AMP PEAK  9(6P21.1) WILD-TYPE     30     33     52
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            30
  CLUS_2                          11                            33
  CLUS_3                          23                            52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35      9     25
  AMP PEAK  9(6P21.1) WILD-TYPE     41     23     51
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            41
  CLUS_2                           9                            23
  CLUS_3                          25                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       21      4      8      8      2
  AMP PEAK  9(6P21.1) WILD-TYPE     25      7     18     23      9
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          21                            25
  CLUS_2                           4                             7
  CLUS_3                           8                            18
  CLUS_4                           8                            23
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       16     21      6
  AMP PEAK  9(6P21.1) WILD-TYPE     23     53      6
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          16                            23
  CLUS_2                          21                            53
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       41     26      1
  AMP PEAK  9(6P21.1) WILD-TYPE     43     61     11
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          41                            43
  CLUS_2                          26                            61
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       35      7     16     10
  AMP PEAK  9(6P21.1) WILD-TYPE     27     19     46     23
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           7                            19
  CLUS_3                          16                            46
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       36     18     10      4
  AMP PEAK  9(6P21.1) WILD-TYPE     30     48     25      7
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          36                            30
  CLUS_2                          18                            48
  CLUS_3                          10                            25
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       35      7     26
  AMP PEAK  9(6P21.1) WILD-TYPE     27     15     68
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          35                            27
  CLUS_2                           7                            15
  CLUS_3                          26                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6Q23.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       22      8     12
  AMP PEAK 10(6Q23.3) WILD-TYPE     43     36     63
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          22                            43
  CLUS_2                           8                            36
  CLUS_3                          12                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       24      5     13
  AMP PEAK 10(6Q23.3) WILD-TYPE     52     27     63
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          24                            52
  CLUS_2                           5                            27
  CLUS_3                          13                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q23.3) MUTATED       14      3      3      4      3
  AMP PEAK 10(6Q23.3) WILD-TYPE     32      8     23     27      8
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          14                            32
  CLUS_2                           3                             8
  CLUS_3                           3                            23
  CLUS_4                           4                            27
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       10     13      4
  AMP PEAK 10(6Q23.3) WILD-TYPE     29     61      8
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          10                            29
  CLUS_2                          13                            61
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       26     14      1
  AMP PEAK 10(6Q23.3) WILD-TYPE     58     73     11
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          26                            58
  CLUS_2                          14                            73
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q23.3) MUTATED       22      4      9      6
  AMP PEAK 10(6Q23.3) WILD-TYPE     40     22     53     27
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          22                            40
  CLUS_2                           4                            22
  CLUS_3                           9                            53
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q23.3) MUTATED       23     10      4      4
  AMP PEAK 10(6Q23.3) WILD-TYPE     43     56     31      7
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          23                            43
  CLUS_2                          10                            56
  CLUS_3                           4                            31
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q23.3) MUTATED       23      3     15
  AMP PEAK 10(6Q23.3) WILD-TYPE     39     19     79
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q23.3) MUTATED AMP PEAK 10(6Q23.3) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           3                            19
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       49     28     49
  AMP PEAK 11(7P11.2) WILD-TYPE     16     16     26
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          28                            16
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       58     22     46
  AMP PEAK 11(7P11.2) WILD-TYPE     18     10     30
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          58                            18
  CLUS_2                          22                            10
  CLUS_3                          46                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(7P11.2) MUTATED       34      7     17     20      5
  AMP PEAK 11(7P11.2) WILD-TYPE     12      4      9     11      6
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          34                            12
  CLUS_2                           7                             4
  CLUS_3                          17                             9
  CLUS_4                          20                            11
  CLUS_5                           5                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       25     46     12
  AMP PEAK 11(7P11.2) WILD-TYPE     14     28      0
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          25                            14
  CLUS_2                          46                            28
  CLUS_3                          12                             0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       64     56      5
  AMP PEAK 11(7P11.2) WILD-TYPE     20     31      7
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          64                            20
  CLUS_2                          56                            31
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       46     20     40     19
  AMP PEAK 11(7P11.2) WILD-TYPE     16      6     22     14
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          46                            16
  CLUS_2                          20                             6
  CLUS_3                          40                            22
  CLUS_4                          19                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       48     43     22      8
  AMP PEAK 11(7P11.2) WILD-TYPE     18     23     13      3
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          48                            18
  CLUS_2                          43                            23
  CLUS_3                          22                            13
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       45     18     58
  AMP PEAK 11(7P11.2) WILD-TYPE     17      4     36
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          45                            17
  CLUS_2                          18                             4
  CLUS_3                          58                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       41     24     49
  AMP PEAK 12(7Q21.2) WILD-TYPE     24     20     26
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          41                            24
  CLUS_2                          24                            20
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       49     15     50
  AMP PEAK 12(7Q21.2) WILD-TYPE     27     17     26
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          49                            27
  CLUS_2                          15                            17
  CLUS_3                          50                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7Q21.2) MUTATED       32      5     17     18      7
  AMP PEAK 12(7Q21.2) WILD-TYPE     14      6      9     13      4
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          32                            14
  CLUS_2                           5                             6
  CLUS_3                          17                             9
  CLUS_4                          18                            13
  CLUS_5                           7                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       24     46      9
  AMP PEAK 12(7Q21.2) WILD-TYPE     15     28      3
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          24                            15
  CLUS_2                          46                            28
  CLUS_3                           9                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       54     54      5
  AMP PEAK 12(7Q21.2) WILD-TYPE     30     33      7
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          54                            30
  CLUS_2                          54                            33
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       36     19     37     21
  AMP PEAK 12(7Q21.2) WILD-TYPE     26      7     25     12
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          36                            26
  CLUS_2                          19                             7
  CLUS_3                          37                            25
  CLUS_4                          21                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q21.2) MUTATED       40     43     20      8
  AMP PEAK 12(7Q21.2) WILD-TYPE     26     23     15      3
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          40                            26
  CLUS_2                          43                            23
  CLUS_3                          20                            15
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q21.2) MUTATED       37     18     56
  AMP PEAK 12(7Q21.2) WILD-TYPE     25      4     38
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          37                            25
  CLUS_2                          18                             4
  CLUS_3                          56                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(8P23.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       26     18      8
  AMP PEAK 13(8P23.1) WILD-TYPE     39     26     67
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          26                            39
  CLUS_2                          18                            26
  CLUS_3                           8                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       32      5     15
  AMP PEAK 13(8P23.1) WILD-TYPE     44     27     61
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          32                            44
  CLUS_2                           5                            27
  CLUS_3                          15                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(8P23.1) MUTATED       17      1      8      3      2
  AMP PEAK 13(8P23.1) WILD-TYPE     29     10     18     28      9
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          17                            29
  CLUS_2                           1                            10
  CLUS_3                           8                            18
  CLUS_4                           3                            28
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       16     14      1
  AMP PEAK 13(8P23.1) WILD-TYPE     23     60     11
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          16                            23
  CLUS_2                          14                            60
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       33     15      3
  AMP PEAK 13(8P23.1) WILD-TYPE     51     72      9
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          33                            51
  CLUS_2                          15                            72
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P23.1) MUTATED       25      9     10      7
  AMP PEAK 13(8P23.1) WILD-TYPE     37     17     52     26
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           9                            17
  CLUS_3                          10                            52
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(8P23.1) MUTATED       28      7     11      2
  AMP PEAK 13(8P23.1) WILD-TYPE     38     59     24      9
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          28                            38
  CLUS_2                           7                            59
  CLUS_3                          11                            24
  CLUS_4                           2                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(8P23.1) MUTATED       25      8     15
  AMP PEAK 13(8P23.1) WILD-TYPE     37     14     79
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P23.1) MUTATED AMP PEAK 13(8P23.1) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           8                            14
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       34     19     32
  AMP PEAK 14(8P11.21) WILD-TYPE     31     25     43
D14V1, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           34                             31
  CLUS_2                           19                             25
  CLUS_3                           32                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       37     10     38
  AMP PEAK 14(8P11.21) WILD-TYPE     39     22     38
D14V2, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           37                             39
  CLUS_2                           10                             22
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(8P11.21) MUTATED       22      5     18      9      4
  AMP PEAK 14(8P11.21) WILD-TYPE     24      6      8     22      7
D14V3, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           22                             24
  CLUS_2                            5                              6
  CLUS_3                           18                              8
  CLUS_4                            9                             22
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       21     35      2
  AMP PEAK 14(8P11.21) WILD-TYPE     18     39     10
D14V4, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           21                             18
  CLUS_2                           35                             39
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       40     41      3
  AMP PEAK 14(8P11.21) WILD-TYPE     44     46      9
D14V5, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           40                             44
  CLUS_2                           41                             46
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       30     11     28     15
  AMP PEAK 14(8P11.21) WILD-TYPE     32     15     34     18
D14V6, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           30                             32
  CLUS_2                           11                             15
  CLUS_3                           28                             34
  CLUS_4                           15                             18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(8P11.21) MUTATED       33     30     14      4
  AMP PEAK 14(8P11.21) WILD-TYPE     33     36     21      7
D14V7, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           33                             33
  CLUS_2                           30                             36
  CLUS_3                           14                             21
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(8P11.21) MUTATED       31     10     40
  AMP PEAK 14(8P11.21) WILD-TYPE     31     12     54
D14V8, multiclass
        clus
vv       AMP PEAK 14(8P11.21) MUTATED AMP PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           31                             31
  CLUS_2                           10                             12
  CLUS_3                           40                             54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       56     26     63
  AMP PEAK 15(8Q24.21) WILD-TYPE      9     18     12
D15V1, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           56                              9
  CLUS_2                           26                             18
  CLUS_3                           63                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       59     20     66
  AMP PEAK 15(8Q24.21) WILD-TYPE     17     12     10
D15V2, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           59                             17
  CLUS_2                           20                             12
  CLUS_3                           66                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8Q24.21) MUTATED       34      6     23     28      6
  AMP PEAK 15(8Q24.21) WILD-TYPE     12      5      3      3      5
D15V3, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           34                             12
  CLUS_2                            6                              5
  CLUS_3                           23                              3
  CLUS_4                           28                              3
  CLUS_5                            6                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       28     62      7
  AMP PEAK 15(8Q24.21) WILD-TYPE     11     12      5
D15V4, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           28                             11
  CLUS_2                           62                             12
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       66     73      5
  AMP PEAK 15(8Q24.21) WILD-TYPE     18     14      7
D15V5, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           66                             18
  CLUS_2                           73                             14
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q24.21) MUTATED       51     16     48     29
  AMP PEAK 15(8Q24.21) WILD-TYPE     11     10     14      4
D15V6, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           51                             11
  CLUS_2                           16                             10
  CLUS_3                           48                             14
  CLUS_4                           29                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8Q24.21) MUTATED       54     54     24      8
  AMP PEAK 15(8Q24.21) WILD-TYPE     12     12     11      3
D15V7, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           54                             12
  CLUS_2                           54                             12
  CLUS_3                           24                             11
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8Q24.21) MUTATED       52     14     74
  AMP PEAK 15(8Q24.21) WILD-TYPE     10      8     20
D15V8, multiclass
        clus
vv       AMP PEAK 15(8Q24.21) MUTATED AMP PEAK 15(8Q24.21) WILD-TYPE
  CLUS_1                           52                             10
  CLUS_2                           14                              8
  CLUS_3                           74                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       19      5     16
  AMP PEAK 16(9P13.3) WILD-TYPE     46     39     59
D16V1, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          19                            46
  CLUS_2                           5                            39
  CLUS_3                          16                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       21      3     16
  AMP PEAK 16(9P13.3) WILD-TYPE     55     29     60
D16V2, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            55
  CLUS_2                           3                            29
  CLUS_3                          16                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(9P13.3) MUTATED       11      1     11      3      1
  AMP PEAK 16(9P13.3) WILD-TYPE     35     10     15     28     10
D16V3, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          11                            35
  CLUS_2                           1                            10
  CLUS_3                          11                            15
  CLUS_4                           3                            28
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED        9     15      3
  AMP PEAK 16(9P13.3) WILD-TYPE     30     59      9
D16V4, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                           9                            30
  CLUS_2                          15                            59
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       21     17      2
  AMP PEAK 16(9P13.3) WILD-TYPE     63     70     10
D16V5, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            63
  CLUS_2                          17                            70
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9P13.3) MUTATED       17      4     16      3
  AMP PEAK 16(9P13.3) WILD-TYPE     45     22     46     30
D16V6, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            22
  CLUS_3                          16                            46
  CLUS_4                           3                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(9P13.3) MUTATED       18     15      6      1
  AMP PEAK 16(9P13.3) WILD-TYPE     48     51     29     10
D16V7, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          18                            48
  CLUS_2                          15                            51
  CLUS_3                           6                            29
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(9P13.3) MUTATED       17      4     19
  AMP PEAK 16(9P13.3) WILD-TYPE     45     18     75
D16V8, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           4                            18
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       25      8     31
  AMP PEAK 17(9Q34.3) WILD-TYPE     40     36     44
D17V1, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                           8                            36
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       24      8     32
  AMP PEAK 17(9Q34.3) WILD-TYPE     52     24     44
D17V2, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          24                            52
  CLUS_2                           8                            24
  CLUS_3                          32                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(9Q34.3) MUTATED       16      1     14     12      1
  AMP PEAK 17(9Q34.3) WILD-TYPE     30     10     12     19     10
D17V3, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          16                            30
  CLUS_2                           1                            10
  CLUS_3                          14                            12
  CLUS_4                          12                            19
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       13     27      4
  AMP PEAK 17(9Q34.3) WILD-TYPE     26     47      8
D17V4, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                          27                            47
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       27     34      2
  AMP PEAK 17(9Q34.3) WILD-TYPE     57     53     10
D17V5, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          27                            57
  CLUS_2                          34                            53
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       19      9     28      7
  AMP PEAK 17(9Q34.3) WILD-TYPE     43     17     34     26
D17V6, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           9                            17
  CLUS_3                          28                            34
  CLUS_4                           7                            26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       21     30      8      3
  AMP PEAK 17(9Q34.3) WILD-TYPE     45     36     27      8
D17V7, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          30                            36
  CLUS_3                           8                            27
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       19      8     35
  AMP PEAK 17(9Q34.3) WILD-TYPE     43     14     59
D17V8, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          19                            43
  CLUS_2                           8                            14
  CLUS_3                          35                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       23      8     21
  AMP PEAK 18(11P13) WILD-TYPE     42     36     54
D18V1, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         23                           42
  CLUS_2                          8                           36
  CLUS_3                         21                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       25      9     18
  AMP PEAK 18(11P13) WILD-TYPE     51     23     58
D18V2, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         25                           51
  CLUS_2                          9                           23
  CLUS_3                         18                           58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(11P13) MUTATED       15      4     10      6      2
  AMP PEAK 18(11P13) WILD-TYPE     31      7     16     25      9
D18V3, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         15                           31
  CLUS_2                          4                            7
  CLUS_3                         10                           16
  CLUS_4                          6                           25
  CLUS_5                          2                            9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       12     20      5
  AMP PEAK 18(11P13) WILD-TYPE     27     54      7
D18V4, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         12                           27
  CLUS_2                         20                           54
  CLUS_3                          5                            7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       28     19      4
  AMP PEAK 18(11P13) WILD-TYPE     56     68      8
D18V5, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         28                           56
  CLUS_2                         19                           68
  CLUS_3                          4                            8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11P13) MUTATED       21      8     18      4
  AMP PEAK 18(11P13) WILD-TYPE     41     18     44     29
D18V6, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          8                           18
  CLUS_3                         18                           44
  CLUS_4                          4                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(11P13) MUTATED       23     17      8      3
  AMP PEAK 18(11P13) WILD-TYPE     43     49     27      8
D18V7, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         23                           43
  CLUS_2                         17                           49
  CLUS_3                          8                           27
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(11P13) MUTATED       21      8     22
  AMP PEAK 18(11P13) WILD-TYPE     41     14     72
D18V8, multiclass
        clus
vv       AMP PEAK 18(11P13) MUTATED AMP PEAK 18(11P13) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          8                           14
  CLUS_3                         22                           72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       17      7     26
  AMP PEAK 19(11P13) WILD-TYPE     48     37     49
D19V1, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         17                           48
  CLUS_2                          7                           37
  CLUS_3                         26                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       20      8     22
  AMP PEAK 19(11P13) WILD-TYPE     56     24     54
D19V2, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         20                           56
  CLUS_2                          8                           24
  CLUS_3                         22                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(11P13) MUTATED       12      3     11      7      3
  AMP PEAK 19(11P13) WILD-TYPE     34      8     15     24      8
D19V3, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         12                           34
  CLUS_2                          3                            8
  CLUS_3                         11                           15
  CLUS_4                          7                           24
  CLUS_5                          3                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       10     23      3
  AMP PEAK 19(11P13) WILD-TYPE     29     51      9
D19V4, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         10                           29
  CLUS_2                         23                           51
  CLUS_3                          3                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       22     24      3
  AMP PEAK 19(11P13) WILD-TYPE     62     63      9
D19V5, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         22                           62
  CLUS_2                         24                           63
  CLUS_3                          3                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED       15      8     19      7
  AMP PEAK 19(11P13) WILD-TYPE     47     18     43     26
D19V6, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         15                           47
  CLUS_2                          8                           18
  CLUS_3                         19                           43
  CLUS_4                          7                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED       17     21      8      3
  AMP PEAK 19(11P13) WILD-TYPE     49     45     27      8
D19V7, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         17                           49
  CLUS_2                         21                           45
  CLUS_3                          8                           27
  CLUS_4                          3                            8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       15      8     26
  AMP PEAK 19(11P13) WILD-TYPE     47     14     68
D19V8, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         15                           47
  CLUS_2                          8                           14
  CLUS_3                         26                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       28     15     61
  AMP PEAK 20(11Q13.3) WILD-TYPE     37     29     14
D20V1, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           28                             37
  CLUS_2                           15                             29
  CLUS_3                           61                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       32     20     52
  AMP PEAK 20(11Q13.3) WILD-TYPE     44     12     24
D20V2, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           32                             44
  CLUS_2                           20                             12
  CLUS_3                           52                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(11Q13.3) MUTATED       20      8     18     21      7
  AMP PEAK 20(11Q13.3) WILD-TYPE     26      3      8     10      4
D20V3, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           20                             26
  CLUS_2                            8                              3
  CLUS_3                           18                              8
  CLUS_4                           21                             10
  CLUS_5                            7                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       14     52      8
  AMP PEAK 20(11Q13.3) WILD-TYPE     25     22      4
D20V4, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           14                             25
  CLUS_2                           52                             22
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       36     61      6
  AMP PEAK 20(11Q13.3) WILD-TYPE     48     26      6
D20V5, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           36                             48
  CLUS_2                           61                             26
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q13.3) MUTATED       29      8     43     23
  AMP PEAK 20(11Q13.3) WILD-TYPE     33     18     19     10
D20V6, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           29                             33
  CLUS_2                            8                             18
  CLUS_3                           43                             19
  CLUS_4                           23                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q13.3) MUTATED       31     45     19      7
  AMP PEAK 20(11Q13.3) WILD-TYPE     35     21     16      4
D20V7, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           31                             35
  CLUS_2                           45                             21
  CLUS_3                           19                             16
  CLUS_4                            7                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q13.3) MUTATED       30      7     65
  AMP PEAK 20(11Q13.3) WILD-TYPE     32     15     29
D20V8, multiclass
        clus
vv       AMP PEAK 20(11Q13.3) MUTATED AMP PEAK 20(11Q13.3) WILD-TYPE
  CLUS_1                           30                             32
  CLUS_2                            7                             15
  CLUS_3                           65                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       26     13     40
  AMP PEAK 21(12P12.1) WILD-TYPE     39     31     35
D21V1, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           26                             39
  CLUS_2                           13                             31
  CLUS_3                           40                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       26     15     38
  AMP PEAK 21(12P12.1) WILD-TYPE     50     17     38
D21V2, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           26                             50
  CLUS_2                           15                             17
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(12P12.1) MUTATED       16      7     16     15      5
  AMP PEAK 21(12P12.1) WILD-TYPE     30      4     10     16      6
D21V3, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           16                             30
  CLUS_2                            7                              4
  CLUS_3                           16                             10
  CLUS_4                           15                             16
  CLUS_5                            5                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       13     42      4
  AMP PEAK 21(12P12.1) WILD-TYPE     26     32      8
D21V4, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           13                             26
  CLUS_2                           42                             32
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       29     45      4
  AMP PEAK 21(12P12.1) WILD-TYPE     55     42      8
D21V5, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           29                             55
  CLUS_2                           45                             42
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P12.1) MUTATED       20     10     34     14
  AMP PEAK 21(12P12.1) WILD-TYPE     42     16     28     19
D21V6, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             16
  CLUS_3                           34                             28
  CLUS_4                           14                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P12.1) MUTATED       23     37     12      5
  AMP PEAK 21(12P12.1) WILD-TYPE     43     29     23      6
D21V7, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           23                             43
  CLUS_2                           37                             29
  CLUS_3                           12                             23
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P12.1) MUTATED       20     10     47
  AMP PEAK 21(12P12.1) WILD-TYPE     42     12     47
D21V8, multiclass
        clus
vv       AMP PEAK 21(12P12.1) MUTATED AMP PEAK 21(12P12.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             12
  CLUS_3                           47                             47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       20      7     24
  AMP PEAK 22(12Q15) WILD-TYPE     45     37     51
D22V1, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         20                           45
  CLUS_2                          7                           37
  CLUS_3                         24                           51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       20      7     24
  AMP PEAK 22(12Q15) WILD-TYPE     56     25     52
D22V2, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         20                           56
  CLUS_2                          7                           25
  CLUS_3                         24                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(12Q15) MUTATED        9      1      9      7      3
  AMP PEAK 22(12Q15) WILD-TYPE     37     10     17     24      8
D22V3, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                          9                           37
  CLUS_2                          1                           10
  CLUS_3                          9                           17
  CLUS_4                          7                           24
  CLUS_5                          3                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED        7     20      2
  AMP PEAK 22(12Q15) WILD-TYPE     32     54     10
D22V4, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                          7                           32
  CLUS_2                         20                           54
  CLUS_3                          2                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       23     26      1
  AMP PEAK 22(12Q15) WILD-TYPE     61     61     11
D22V5, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         23                           61
  CLUS_2                         26                           61
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q15) MUTATED       14      9     19      8
  AMP PEAK 22(12Q15) WILD-TYPE     48     17     43     25
D22V6, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         14                           48
  CLUS_2                          9                           17
  CLUS_3                         19                           43
  CLUS_4                          8                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q15) MUTATED       16     21      7      5
  AMP PEAK 22(12Q15) WILD-TYPE     50     45     28      6
D22V7, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         16                           50
  CLUS_2                         21                           45
  CLUS_3                          7                           28
  CLUS_4                          5                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q15) MUTATED       13      9     27
  AMP PEAK 22(12Q15) WILD-TYPE     49     13     67
D22V8, multiclass
        clus
vv       AMP PEAK 22(12Q15) MUTATED AMP PEAK 22(12Q15) WILD-TYPE
  CLUS_1                         13                           49
  CLUS_2                          9                           13
  CLUS_3                         27                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       34     13     18
  AMP PEAK 23(13Q22.1) WILD-TYPE     31     31     57
D23V1, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           34                             31
  CLUS_2                           13                             31
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       37      8     20
  AMP PEAK 23(13Q22.1) WILD-TYPE     39     24     56
D23V2, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           37                             39
  CLUS_2                            8                             24
  CLUS_3                           20                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(13Q22.1) MUTATED       21      2      7      9      2
  AMP PEAK 23(13Q22.1) WILD-TYPE     25      9     19     22      9
D23V3, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           21                             25
  CLUS_2                            2                              9
  CLUS_3                            7                             19
  CLUS_4                            9                             22
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       15     18      8
  AMP PEAK 23(13Q22.1) WILD-TYPE     24     56      4
D23V4, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           15                             24
  CLUS_2                           18                             56
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       42     21      1
  AMP PEAK 23(13Q22.1) WILD-TYPE     42     66     11
D23V5, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           42                             42
  CLUS_2                           21                             66
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(13Q22.1) MUTATED       31     12     14      7
  AMP PEAK 23(13Q22.1) WILD-TYPE     31     14     48     26
D23V6, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           31                             31
  CLUS_2                           12                             14
  CLUS_3                           14                             48
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(13Q22.1) MUTATED       34     18      9      3
  AMP PEAK 23(13Q22.1) WILD-TYPE     32     48     26      8
D23V7, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           34                             32
  CLUS_2                           18                             48
  CLUS_3                            9                             26
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(13Q22.1) MUTATED       33     10     21
  AMP PEAK 23(13Q22.1) WILD-TYPE     29     12     73
D23V8, multiclass
        clus
vv       AMP PEAK 23(13Q22.1) MUTATED AMP PEAK 23(13Q22.1) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           10                             12
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(14Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       19      6     36
  AMP PEAK 24(14Q21.1) WILD-TYPE     46     38     39
D24V1, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           19                             46
  CLUS_2                            6                             38
  CLUS_3                           36                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       18      8     35
  AMP PEAK 24(14Q21.1) WILD-TYPE     58     24     41
D24V2, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           18                             58
  CLUS_2                            8                             24
  CLUS_3                           35                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(14Q21.1) MUTATED        8      5     11     12      5
  AMP PEAK 24(14Q21.1) WILD-TYPE     38      6     15     19      6
D24V3, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                            8                             38
  CLUS_2                            5                              6
  CLUS_3                           11                             15
  CLUS_4                           12                             19
  CLUS_5                            5                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED        8     32      1
  AMP PEAK 24(14Q21.1) WILD-TYPE     31     42     11
D24V4, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                            8                             31
  CLUS_2                           32                             42
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       19     39      2
  AMP PEAK 24(14Q21.1) WILD-TYPE     65     48     10
D24V5, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           19                             65
  CLUS_2                           39                             48
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(14Q21.1) MUTATED       14      5     31     10
  AMP PEAK 24(14Q21.1) WILD-TYPE     48     21     31     23
D24V6, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           14                             48
  CLUS_2                            5                             21
  CLUS_3                           31                             31
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(14Q21.1) MUTATED       15     29     11      5
  AMP PEAK 24(14Q21.1) WILD-TYPE     51     37     24      6
D24V7, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           15                             51
  CLUS_2                           29                             37
  CLUS_3                           11                             24
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(14Q21.1) MUTATED       14      5     41
  AMP PEAK 24(14Q21.1) WILD-TYPE     48     17     53
D24V8, multiclass
        clus
vv       AMP PEAK 24(14Q21.1) MUTATED AMP PEAK 24(14Q21.1) WILD-TYPE
  CLUS_1                           14                             48
  CLUS_2                            5                             17
  CLUS_3                           41                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(15Q26.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       30     10     18
  AMP PEAK 25(15Q26.1) WILD-TYPE     35     34     57
D25V1, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           30                             35
  CLUS_2                           10                             34
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       31      9     18
  AMP PEAK 25(15Q26.1) WILD-TYPE     45     23     58
D25V2, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           31                             45
  CLUS_2                            9                             23
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(15Q26.1) MUTATED       24      4      6      7      2
  AMP PEAK 25(15Q26.1) WILD-TYPE     22      7     20     24      9
D25V3, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           24                             22
  CLUS_2                            4                              7
  CLUS_3                            6                             20
  CLUS_4                            7                             24
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       19     17      7
  AMP PEAK 25(15Q26.1) WILD-TYPE     20     57      5
D25V4, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           19                             20
  CLUS_2                           17                             57
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       36     21      1
  AMP PEAK 25(15Q26.1) WILD-TYPE     48     66     11
D25V5, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           36                             48
  CLUS_2                           21                             66
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(15Q26.1) MUTATED       28      8     14      8
  AMP PEAK 25(15Q26.1) WILD-TYPE     34     18     48     25
D25V6, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            8                             18
  CLUS_3                           14                             48
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(15Q26.1) MUTATED       30     16      8      4
  AMP PEAK 25(15Q26.1) WILD-TYPE     36     50     27      7
D25V7, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           30                             36
  CLUS_2                           16                             50
  CLUS_3                            8                             27
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(15Q26.1) MUTATED       28      8     22
  AMP PEAK 25(15Q26.1) WILD-TYPE     34     14     72
D25V8, multiclass
        clus
vv       AMP PEAK 25(15Q26.1) MUTATED AMP PEAK 25(15Q26.1) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            8                             14
  CLUS_3                           22                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       37     15     23
  AMP PEAK 26(17Q12) WILD-TYPE     28     29     52
D26V1, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         37                           28
  CLUS_2                         15                           29
  CLUS_3                         23                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       41      7     27
  AMP PEAK 26(17Q12) WILD-TYPE     35     25     49
D26V2, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         41                           35
  CLUS_2                          7                           25
  CLUS_3                         27                           49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(17Q12) MUTATED       21      4     12      6      3
  AMP PEAK 26(17Q12) WILD-TYPE     25      7     14     25      8
D26V3, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         21                           25
  CLUS_2                          4                            7
  CLUS_3                         12                           14
  CLUS_4                          6                           25
  CLUS_5                          3                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       18     23      5
  AMP PEAK 26(17Q12) WILD-TYPE     21     51      7
D26V4, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         18                           21
  CLUS_2                         23                           51
  CLUS_3                          5                            7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       45     27      2
  AMP PEAK 26(17Q12) WILD-TYPE     39     60     10
D26V5, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         45                           39
  CLUS_2                         27                           60
  CLUS_3                          2                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q12) MUTATED       32     14     18     10
  AMP PEAK 26(17Q12) WILD-TYPE     30     12     44     23
D26V6, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         32                           30
  CLUS_2                         14                           12
  CLUS_3                         18                           44
  CLUS_4                         10                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17Q12) MUTATED       36     20     11      4
  AMP PEAK 26(17Q12) WILD-TYPE     30     46     24      7
D26V7, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         36                           30
  CLUS_2                         20                           46
  CLUS_3                         11                           24
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17Q12) MUTATED       32     13     26
  AMP PEAK 26(17Q12) WILD-TYPE     30      9     68
D26V8, multiclass
        clus
vv       AMP PEAK 26(17Q12) MUTATED AMP PEAK 26(17Q12) WILD-TYPE
  CLUS_1                         32                           30
  CLUS_2                         13                            9
  CLUS_3                         26                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       26     10     33
  AMP PEAK 27(18P11.32) WILD-TYPE     39     34     42
D27V1, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            26                              39
  CLUS_2                            10                              34
  CLUS_3                            33                              42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       22     15     32
  AMP PEAK 27(18P11.32) WILD-TYPE     54     17     44
D27V2, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            22                              54
  CLUS_2                            15                              17
  CLUS_3                            32                              44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(18P11.32) MUTATED       14      4     14     11      2
  AMP PEAK 27(18P11.32) WILD-TYPE     32      7     12     20      9
D27V3, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            14                              32
  CLUS_2                             4                               7
  CLUS_3                            14                              12
  CLUS_4                            11                              20
  CLUS_5                             2                               9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       12     30      3
  AMP PEAK 27(18P11.32) WILD-TYPE     27     44      9
D27V4, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            12                              27
  CLUS_2                            30                              44
  CLUS_3                             3                               9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       27     40      1
  AMP PEAK 27(18P11.32) WILD-TYPE     57     47     11
D27V5, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            27                              57
  CLUS_2                            40                              47
  CLUS_3                             1                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18P11.32) MUTATED       20      8     26     14
  AMP PEAK 27(18P11.32) WILD-TYPE     42     18     36     19
D27V6, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             8                              18
  CLUS_3                            26                              36
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(18P11.32) MUTATED       23     30     10      4
  AMP PEAK 27(18P11.32) WILD-TYPE     43     36     25      7
D27V7, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            23                              43
  CLUS_2                            30                              36
  CLUS_3                            10                              25
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(18P11.32) MUTATED       20      8     39
  AMP PEAK 27(18P11.32) WILD-TYPE     42     14     55
D27V8, multiclass
        clus
vv       AMP PEAK 27(18P11.32) MUTATED AMP PEAK 27(18P11.32) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             8                              14
  CLUS_3                            39                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       30     11     18
  AMP PEAK 28(18Q11.2) WILD-TYPE     35     33     57
D28V1, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           30                             35
  CLUS_2                           11                             33
  CLUS_3                           18                             57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       34      8     17
  AMP PEAK 28(18Q11.2) WILD-TYPE     42     24     59
D28V2, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           34                             42
  CLUS_2                            8                             24
  CLUS_3                           17                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(18Q11.2) MUTATED       22      2      9      4      0
  AMP PEAK 28(18Q11.2) WILD-TYPE     24      9     17     27     11
D28V3, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           22                             24
  CLUS_2                            2                              9
  CLUS_3                            9                             17
  CLUS_4                            4                             27
  CLUS_5                            0                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       17     13      7
  AMP PEAK 28(18Q11.2) WILD-TYPE     22     61      5
D28V4, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           17                             22
  CLUS_2                           13                             61
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       38     21      0
  AMP PEAK 28(18Q11.2) WILD-TYPE     46     66     12
D28V5, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           38                             46
  CLUS_2                           21                             66
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(18Q11.2) MUTATED       28     11     14      6
  AMP PEAK 28(18Q11.2) WILD-TYPE     34     15     48     27
D28V6, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                           11                             15
  CLUS_3                           14                             48
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(18Q11.2) MUTATED       31     14     10      3
  AMP PEAK 28(18Q11.2) WILD-TYPE     35     52     25      8
D28V7, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           31                             35
  CLUS_2                           14                             52
  CLUS_3                           10                             25
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(18Q11.2) MUTATED       28     11     19
  AMP PEAK 28(18Q11.2) WILD-TYPE     34     11     75
D28V8, multiclass
        clus
vv       AMP PEAK 28(18Q11.2) MUTATED AMP PEAK 28(18Q11.2) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                           11                             11
  CLUS_3                           19                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       11      5     16
  AMP PEAK 29(19P13.2) WILD-TYPE     54     39     59
D29V1, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            5                             39
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       12      2     18
  AMP PEAK 29(19P13.2) WILD-TYPE     64     30     58
D29V2, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           12                             64
  CLUS_2                            2                             30
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(19P13.2) MUTATED        6      2      5      7      2
  AMP PEAK 29(19P13.2) WILD-TYPE     40      9     21     24      9
D29V3, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            6                             40
  CLUS_2                            2                              9
  CLUS_3                            5                             21
  CLUS_4                            7                             24
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED        4     16      2
  AMP PEAK 29(19P13.2) WILD-TYPE     35     58     10
D29V4, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            4                             35
  CLUS_2                           16                             58
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       12     19      0
  AMP PEAK 29(19P13.2) WILD-TYPE     72     68     12
D29V5, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           12                             72
  CLUS_2                           19                             68
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED        7      5     11      8
  AMP PEAK 29(19P13.2) WILD-TYPE     55     21     51     25
D29V6, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            7                             55
  CLUS_2                            5                             21
  CLUS_3                           11                             51
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       11     14      4      0
  AMP PEAK 29(19P13.2) WILD-TYPE     55     52     31     11
D29V7, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           11                             55
  CLUS_2                           14                             52
  CLUS_3                            4                             31
  CLUS_4                            0                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED        8      4     17
  AMP PEAK 29(19P13.2) WILD-TYPE     54     18     77
D29V8, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            8                             54
  CLUS_2                            4                             18
  CLUS_3                           17                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       29      9     16
  AMP PEAK 30(19Q12) WILD-TYPE     36     35     59
D30V1, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         29                           36
  CLUS_2                          9                           35
  CLUS_3                         16                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       28      9     17
  AMP PEAK 30(19Q12) WILD-TYPE     48     23     59
D30V2, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         28                           48
  CLUS_2                          9                           23
  CLUS_3                         17                           59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(19Q12) MUTATED       17      3      7      1      3
  AMP PEAK 30(19Q12) WILD-TYPE     29      8     19     30      8
D30V3, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         17                           29
  CLUS_2                          3                            8
  CLUS_3                          7                           19
  CLUS_4                          1                           30
  CLUS_5                          3                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       15     13      3
  AMP PEAK 30(19Q12) WILD-TYPE     24     61      9
D30V4, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         15                           24
  CLUS_2                         13                           61
  CLUS_3                          3                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       32     21      1
  AMP PEAK 30(19Q12) WILD-TYPE     52     66     11
D30V5, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         32                           52
  CLUS_2                         21                           66
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       23      9     15      7
  AMP PEAK 30(19Q12) WILD-TYPE     39     17     47     26
D30V6, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         23                           39
  CLUS_2                          9                           17
  CLUS_3                         15                           47
  CLUS_4                          7                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       26     14     11      2
  AMP PEAK 30(19Q12) WILD-TYPE     40     52     24      9
D30V7, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         26                           40
  CLUS_2                         14                           52
  CLUS_3                         11                           24
  CLUS_4                          2                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       25      7     21
  AMP PEAK 30(19Q12) WILD-TYPE     37     15     73
D30V8, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         25                           37
  CLUS_2                          7                           15
  CLUS_3                         21                           73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       23     11     35
  AMP PEAK 31(XQ28) WILD-TYPE     42     33     40
D31V1, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        23                          42
  CLUS_2                        11                          33
  CLUS_3                        35                          40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       22     10     37
  AMP PEAK 31(XQ28) WILD-TYPE     54     22     39
D31V2, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          54
  CLUS_2                        10                          22
  CLUS_3                        37                          39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(XQ28) MUTATED       13      1     16     14      5
  AMP PEAK 31(XQ28) WILD-TYPE     33     10     10     17      6
D31V3, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        13                          33
  CLUS_2                         1                          10
  CLUS_3                        16                          10
  CLUS_4                        14                          17
  CLUS_5                         5                           6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       10     36      3
  AMP PEAK 31(XQ28) WILD-TYPE     29     38      9
D31V4, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        10                          29
  CLUS_2                        36                          38
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       24     41      3
  AMP PEAK 31(XQ28) WILD-TYPE     60     46      9
D31V5, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        24                          60
  CLUS_2                        41                          46
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(XQ28) MUTATED       22      2     29     15
  AMP PEAK 31(XQ28) WILD-TYPE     40     24     33     18
D31V6, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          40
  CLUS_2                         2                          24
  CLUS_3                        29                          33
  CLUS_4                        15                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(XQ28) MUTATED       23     30     10      4
  AMP PEAK 31(XQ28) WILD-TYPE     43     36     25      7
D31V7, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        23                          43
  CLUS_2                        30                          36
  CLUS_3                        10                          25
  CLUS_4                         4                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(XQ28) MUTATED       22      2     43
  AMP PEAK 31(XQ28) WILD-TYPE     40     20     51
D31V8, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        22                          40
  CLUS_2                         2                          20
  CLUS_3                        43                          51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       36     13     26
  DEL PEAK  1(1P36.11) WILD-TYPE     29     31     49
D32V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           36                             29
  CLUS_2                           13                             31
  CLUS_3                           26                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       41      9     25
  DEL PEAK  1(1P36.11) WILD-TYPE     35     23     51
D32V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           41                             35
  CLUS_2                            9                             23
  CLUS_3                           25                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       24      2     15      6      1
  DEL PEAK  1(1P36.11) WILD-TYPE     22      9     11     25     10
D32V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           24                             22
  CLUS_2                            2                              9
  CLUS_3                           15                             11
  CLUS_4                            6                             25
  CLUS_5                            1                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       19     24      5
  DEL PEAK  1(1P36.11) WILD-TYPE     20     50      7
D32V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           19                             20
  CLUS_2                           24                             50
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       44     30      1
  DEL PEAK  1(1P36.11) WILD-TYPE     40     57     11
D32V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           44                             40
  CLUS_2                           30                             57
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       33     11     24      7
  DEL PEAK  1(1P36.11) WILD-TYPE     29     15     38     26
D32V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           11                             15
  CLUS_3                           24                             38
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       36     25     10      3
  DEL PEAK  1(1P36.11) WILD-TYPE     30     41     25      8
D32V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           36                             30
  CLUS_2                           25                             41
  CLUS_3                           10                             25
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       33     10     31
  DEL PEAK  1(1P36.11) WILD-TYPE     29     12     63
D32V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           33                             29
  CLUS_2                           10                             12
  CLUS_3                           31                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  2(1P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       29      4     31
  DEL PEAK  2(1P13.2) WILD-TYPE     36     40     44
D33V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          29                            36
  CLUS_2                           4                            40
  CLUS_3                          31                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       29      6     29
  DEL PEAK  2(1P13.2) WILD-TYPE     47     26     47
D33V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          29                            47
  CLUS_2                           6                            26
  CLUS_3                          29                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       15      2     16     10      1
  DEL PEAK  2(1P13.2) WILD-TYPE     31      9     10     21     10
D33V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          15                            31
  CLUS_2                           2                             9
  CLUS_3                          16                            10
  CLUS_4                          10                            21
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       11     28      5
  DEL PEAK  2(1P13.2) WILD-TYPE     28     46      7
D33V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          11                            28
  CLUS_2                          28                            46
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       31     30      3
  DEL PEAK  2(1P13.2) WILD-TYPE     53     57      9
D33V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          31                            53
  CLUS_2                          30                            57
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       24      8     26      6
  DEL PEAK  2(1P13.2) WILD-TYPE     38     18     36     27
D33V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          24                            38
  CLUS_2                           8                            18
  CLUS_3                          26                            36
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       26     26     10      1
  DEL PEAK  2(1P13.2) WILD-TYPE     40     40     25     10
D33V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          26                            40
  CLUS_2                          26                            40
  CLUS_3                          10                            25
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       23      8     32
  DEL PEAK  2(1P13.2) WILD-TYPE     39     14     62
D33V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           8                            14
  CLUS_3                          32                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  3(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      3      8
  DEL PEAK  3(1Q44) WILD-TYPE     59     41     67
D34V1, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          59
  CLUS_2                         3                          41
  CLUS_3                         8                          67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      4      7
  DEL PEAK  3(1Q44) WILD-TYPE     70     28     69
D34V2, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          70
  CLUS_2                         4                          28
  CLUS_3                         7                          69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED        7      1      4      2      1
  DEL PEAK  3(1Q44) WILD-TYPE     39     10     22     29     10
D34V3, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         7                          39
  CLUS_2                         1                          10
  CLUS_3                         4                          22
  CLUS_4                         2                          29
  CLUS_5                         1                          10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        6      7      2
  DEL PEAK  3(1Q44) WILD-TYPE     33     67     10
D34V4, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         6                          33
  CLUS_2                         7                          67
  CLUS_3                         2                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        9      8      0
  DEL PEAK  3(1Q44) WILD-TYPE     75     79     12
D34V5, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         9                          75
  CLUS_2                         8                          79
  CLUS_3                         0                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      4      6      2
  DEL PEAK  3(1Q44) WILD-TYPE     57     22     56     31
D34V6, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          57
  CLUS_2                         4                          22
  CLUS_3                         6                          56
  CLUS_4                         2                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED        5      7      4      0
  DEL PEAK  3(1Q44) WILD-TYPE     61     59     31     11
D34V7, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         5                          61
  CLUS_2                         7                          59
  CLUS_3                         4                          31
  CLUS_4                         0                          11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED        4      4      8
  DEL PEAK  3(1Q44) WILD-TYPE     58     18     86
D34V8, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         4                          58
  CLUS_2                         4                          18
  CLUS_3                         8                          86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  4(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       11      8     40
  DEL PEAK  4(2Q22.1) WILD-TYPE     54     36     35
D35V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            54
  CLUS_2                           8                            36
  CLUS_3                          40                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       10      8     41
  DEL PEAK  4(2Q22.1) WILD-TYPE     66     24     35
D35V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            66
  CLUS_2                           8                            24
  CLUS_3                          41                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(2Q22.1) MUTATED        8      3     18     14      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     38      8      8     17      9
D35V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           8                            38
  CLUS_2                           3                             8
  CLUS_3                          18                             8
  CLUS_4                          14                            17
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED        5     36      4
  DEL PEAK  4(2Q22.1) WILD-TYPE     34     38      8
D35V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           5                            34
  CLUS_2                          36                            38
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       12     45      2
  DEL PEAK  4(2Q22.1) WILD-TYPE     72     42     10
D35V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          12                            72
  CLUS_2                          45                            42
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       10      3     26     20
  DEL PEAK  4(2Q22.1) WILD-TYPE     52     23     36     13
D35V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            52
  CLUS_2                           3                            23
  CLUS_3                          26                            36
  CLUS_4                          20                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(2Q22.1) MUTATED       11     35     10      3
  DEL PEAK  4(2Q22.1) WILD-TYPE     55     31     25      8
D35V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          35                            31
  CLUS_3                          10                            25
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(2Q22.1) MUTATED       10      3     46
  DEL PEAK  4(2Q22.1) WILD-TYPE     52     19     48
D35V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          10                            52
  CLUS_2                           3                            19
  CLUS_3                          46                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  5(2Q33.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED       10      7     19
  DEL PEAK  5(2Q33.3) WILD-TYPE     55     37     56
D36V1, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                          10                            55
  CLUS_2                           7                            37
  CLUS_3                          19                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        9      7     20
  DEL PEAK  5(2Q33.3) WILD-TYPE     67     25     56
D36V2, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           9                            67
  CLUS_2                           7                            25
  CLUS_3                          20                            56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q33.3) MUTATED        5      2      9      6      3
  DEL PEAK  5(2Q33.3) WILD-TYPE     41      9     17     25      8
D36V3, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           5                            41
  CLUS_2                           2                             9
  CLUS_3                           9                            17
  CLUS_4                           6                            25
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        4     20      1
  DEL PEAK  5(2Q33.3) WILD-TYPE     35     54     11
D36V4, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           4                            35
  CLUS_2                          20                            54
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        9     22      4
  DEL PEAK  5(2Q33.3) WILD-TYPE     75     65      8
D36V5, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           9                            75
  CLUS_2                          22                            65
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        7      3     15     10
  DEL PEAK  5(2Q33.3) WILD-TYPE     55     23     47     23
D36V6, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            55
  CLUS_2                           3                            23
  CLUS_3                          15                            47
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q33.3) MUTATED        7     16      7      4
  DEL PEAK  5(2Q33.3) WILD-TYPE     59     50     28      7
D36V7, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           7                            59
  CLUS_2                          16                            50
  CLUS_3                           7                            28
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q33.3) MUTATED        6      3     25
  DEL PEAK  5(2Q33.3) WILD-TYPE     56     19     69
D36V8, multiclass
        clus
vv       DEL PEAK  5(2Q33.3) MUTATED DEL PEAK  5(2Q33.3) WILD-TYPE
  CLUS_1                           6                            56
  CLUS_2                           3                            19
  CLUS_3                          25                            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  6(3P26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       32     16     63
  DEL PEAK  6(3P26.2) WILD-TYPE     33     28     12
D37V1, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          32                            33
  CLUS_2                          16                            28
  CLUS_3                          63                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       33     18     60
  DEL PEAK  6(3P26.2) WILD-TYPE     43     14     16
D37V2, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          33                            43
  CLUS_2                          18                            14
  CLUS_3                          60                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(3P26.2) MUTATED       21      4     23     23      6
  DEL PEAK  6(3P26.2) WILD-TYPE     25      7      3      8      5
D37V3, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          21                            25
  CLUS_2                           4                             7
  CLUS_3                          23                             3
  CLUS_4                          23                             8
  CLUS_5                           6                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       18     55      4
  DEL PEAK  6(3P26.2) WILD-TYPE     21     19      8
D37V4, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          18                            21
  CLUS_2                          55                            19
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       38     66      7
  DEL PEAK  6(3P26.2) WILD-TYPE     46     21      5
D37V5, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          38                            46
  CLUS_2                          66                            21
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P26.2) MUTATED       29     10     48     24
  DEL PEAK  6(3P26.2) WILD-TYPE     33     16     14      9
D37V6, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          29                            33
  CLUS_2                          10                            16
  CLUS_3                          48                            14
  CLUS_4                          24                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(3P26.2) MUTATED       32     50     21      7
  DEL PEAK  6(3P26.2) WILD-TYPE     34     16     14      4
D37V7, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          32                            34
  CLUS_2                          50                            16
  CLUS_3                          21                            14
  CLUS_4                           7                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(3P26.2) MUTATED       29     10     71
  DEL PEAK  6(3P26.2) WILD-TYPE     33     12     23
D37V8, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          29                            33
  CLUS_2                          10                            12
  CLUS_3                          71                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  7(3P14.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       37     18     71
  DEL PEAK  7(3P14.3) WILD-TYPE     28     26      4
D38V1, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          37                            28
  CLUS_2                          18                            26
  CLUS_3                          71                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       37     23     66
  DEL PEAK  7(3P14.3) WILD-TYPE     39      9     10
D38V2, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          37                            39
  CLUS_2                          23                             9
  CLUS_3                          66                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(3P14.3) MUTATED       24      5     24     27      8
  DEL PEAK  7(3P14.3) WILD-TYPE     22      6      2      4      3
D38V3, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          24                            22
  CLUS_2                           5                             6
  CLUS_3                          24                             2
  CLUS_4                          27                             4
  CLUS_5                           8                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       20     64      4
  DEL PEAK  7(3P14.3) WILD-TYPE     19     10      8
D38V4, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                          64                            10
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       43     76      7
  DEL PEAK  7(3P14.3) WILD-TYPE     41     11      5
D38V5, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          43                            41
  CLUS_2                          76                            11
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       32     12     54     28
  DEL PEAK  7(3P14.3) WILD-TYPE     30     14      8      5
D38V6, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            30
  CLUS_2                          12                            14
  CLUS_3                          54                             8
  CLUS_4                          28                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(3P14.3) MUTATED       32     59     25      8
  DEL PEAK  7(3P14.3) WILD-TYPE     34      7     10      3
D38V7, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            34
  CLUS_2                          59                             7
  CLUS_3                          25                            10
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(3P14.3) MUTATED       32     11     81
  DEL PEAK  7(3P14.3) WILD-TYPE     30     11     13
D38V8, multiclass
        clus
vv       DEL PEAK  7(3P14.3) MUTATED DEL PEAK  7(3P14.3) WILD-TYPE
  CLUS_1                          32                            30
  CLUS_2                          11                            11
  CLUS_3                          81                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  8(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       38     17     70
  DEL PEAK  8(3P14.2) WILD-TYPE     27     27      5
D39V1, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          38                            27
  CLUS_2                          17                            27
  CLUS_3                          70                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       38     22     65
  DEL PEAK  8(3P14.2) WILD-TYPE     38     10     11
D39V2, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          38                            38
  CLUS_2                          22                            10
  CLUS_3                          65                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(3P14.2) MUTATED       25      5     23     27      8
  DEL PEAK  8(3P14.2) WILD-TYPE     21      6      3      4      3
D39V3, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          25                            21
  CLUS_2                           5                             6
  CLUS_3                          23                             3
  CLUS_4                          27                             4
  CLUS_5                           8                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       20     63      5
  DEL PEAK  8(3P14.2) WILD-TYPE     19     11      7
D39V4, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          20                            19
  CLUS_2                          63                            11
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       43     75      7
  DEL PEAK  8(3P14.2) WILD-TYPE     41     12      5
D39V5, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          43                            41
  CLUS_2                          75                            12
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       33     11     53     28
  DEL PEAK  8(3P14.2) WILD-TYPE     29     15      9      5
D39V6, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          11                            15
  CLUS_3                          53                             9
  CLUS_4                          28                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(3P14.2) MUTATED       34     58     24      7
  DEL PEAK  8(3P14.2) WILD-TYPE     32      8     11      4
D39V7, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          34                            32
  CLUS_2                          58                             8
  CLUS_3                          24                            11
  CLUS_4                           7                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(3P14.2) MUTATED       33     10     80
  DEL PEAK  8(3P14.2) WILD-TYPE     29     12     14
D39V8, multiclass
        clus
vv       DEL PEAK  8(3P14.2) MUTATED DEL PEAK  8(3P14.2) WILD-TYPE
  CLUS_1                          33                            29
  CLUS_2                          10                            12
  CLUS_3                          80                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  9(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       14      6     13
  DEL PEAK  9(3Q11.1) WILD-TYPE     51     38     62
D40V1, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          14                            51
  CLUS_2                           6                            38
  CLUS_3                          13                            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       16      4     13
  DEL PEAK  9(3Q11.1) WILD-TYPE     60     28     63
D40V2, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          16                            60
  CLUS_2                           4                            28
  CLUS_3                          13                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3Q11.1) MUTATED        7      1      6      4      4
  DEL PEAK  9(3Q11.1) WILD-TYPE     39     10     20     27      7
D40V3, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           7                            39
  CLUS_2                           1                            10
  CLUS_3                           6                            20
  CLUS_4                           4                            27
  CLUS_5                           4                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED        6     15      1
  DEL PEAK  9(3Q11.1) WILD-TYPE     33     59     11
D40V4, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                           6                            33
  CLUS_2                          15                            59
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       17     14      2
  DEL PEAK  9(3Q11.1) WILD-TYPE     67     73     10
D40V5, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          17                            67
  CLUS_2                          14                            73
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       13      5     11      4
  DEL PEAK  9(3Q11.1) WILD-TYPE     49     21     51     29
D40V6, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            49
  CLUS_2                           5                            21
  CLUS_3                          11                            51
  CLUS_4                           4                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3Q11.1) MUTATED       14     12      6      1
  DEL PEAK  9(3Q11.1) WILD-TYPE     52     54     29     10
D40V7, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          14                            52
  CLUS_2                          12                            54
  CLUS_3                           6                            29
  CLUS_4                           1                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3Q11.1) MUTATED       13      5     15
  DEL PEAK  9(3Q11.1) WILD-TYPE     49     17     79
D40V8, multiclass
        clus
vv       DEL PEAK  9(3Q11.1) MUTATED DEL PEAK  9(3Q11.1) WILD-TYPE
  CLUS_1                          13                            49
  CLUS_2                           5                            17
  CLUS_3                          15                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 10(3Q26.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       11      4      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     54     40     74
D41V1, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            4                             40
  CLUS_3                            1                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       15      0      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     61     32     75
D41V2, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           15                             61
  CLUS_2                            0                             32
  CLUS_3                            1                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3Q26.31) MUTATED        7      0      0      1      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     39     11     26     30     11
D41V3, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            7                             39
  CLUS_2                            0                             11
  CLUS_3                            0                             26
  CLUS_4                            1                             30
  CLUS_5                            0                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED        7      1      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     32     73     12
D41V4, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                            7                             32
  CLUS_2                            1                             73
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       15      1      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     69     86     12
D41V5, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           15                             69
  CLUS_2                            1                             86
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED       11      4      0      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     51     22     62     32
D41V6, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             22
  CLUS_3                            0                             62
  CLUS_4                            1                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q26.31) MUTATED       13      1      2      0
  DEL PEAK 10(3Q26.31) WILD-TYPE     53     65     33     11
D41V7, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           13                             53
  CLUS_2                            1                             65
  CLUS_3                            2                             33
  CLUS_4                            0                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q26.31) MUTATED       11      4      1
  DEL PEAK 10(3Q26.31) WILD-TYPE     51     18     93
D41V8, multiclass
        clus
vv       DEL PEAK 10(3Q26.31) MUTATED DEL PEAK 10(3Q26.31) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             18
  CLUS_3                            1                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 11(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       42     16     48
  DEL PEAK 11(4P15.2) WILD-TYPE     23     28     27
D42V1, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          42                            23
  CLUS_2                          16                            28
  CLUS_3                          48                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       45     13     48
  DEL PEAK 11(4P15.2) WILD-TYPE     31     19     28
D42V2, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          45                            31
  CLUS_2                          13                            19
  CLUS_3                          48                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(4P15.2) MUTATED       25      2     20     18      3
  DEL PEAK 11(4P15.2) WILD-TYPE     21      9      6     13      8
D42V3, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          25                            21
  CLUS_2                           2                             9
  CLUS_3                          20                             6
  CLUS_4                          18                            13
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       21     43      4
  DEL PEAK 11(4P15.2) WILD-TYPE     18     31      8
D42V4, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          21                            18
  CLUS_2                          43                            31
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       48     55      3
  DEL PEAK 11(4P15.2) WILD-TYPE     36     32      9
D42V5, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          48                            36
  CLUS_2                          55                            32
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       37     13     38     18
  DEL PEAK 11(4P15.2) WILD-TYPE     25     13     24     15
D42V6, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          37                            25
  CLUS_2                          13                            13
  CLUS_3                          38                            24
  CLUS_4                          18                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(4P15.2) MUTATED       37     42     16      8
  DEL PEAK 11(4P15.2) WILD-TYPE     29     24     19      3
D42V7, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          37                            29
  CLUS_2                          42                            24
  CLUS_3                          16                            19
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(4P15.2) MUTATED       36     12     55
  DEL PEAK 11(4P15.2) WILD-TYPE     26     10     39
D42V8, multiclass
        clus
vv       DEL PEAK 11(4P15.2) MUTATED DEL PEAK 11(4P15.2) WILD-TYPE
  CLUS_1                          36                            26
  CLUS_2                          12                            10
  CLUS_3                          55                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 12(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       49     16     40
  DEL PEAK 12(4Q22.1) WILD-TYPE     16     28     35
D43V1, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          16                            28
  CLUS_3                          40                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       50     15     40
  DEL PEAK 12(4Q22.1) WILD-TYPE     26     17     36
D43V2, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          50                            26
  CLUS_2                          15                            17
  CLUS_3                          40                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(4Q22.1) MUTATED       30      1     18     16      2
  DEL PEAK 12(4Q22.1) WILD-TYPE     16     10      8     15      9
D43V3, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          30                            16
  CLUS_2                           1                            10
  CLUS_3                          18                             8
  CLUS_4                          16                            15
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       25     37      5
  DEL PEAK 12(4Q22.1) WILD-TYPE     14     37      7
D43V4, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          25                            14
  CLUS_2                          37                            37
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       56     47      2
  DEL PEAK 12(4Q22.1) WILD-TYPE     28     40     10
D43V5, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          47                            40
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       42     16     30     17
  DEL PEAK 12(4Q22.1) WILD-TYPE     20     10     32     16
D43V6, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          42                            20
  CLUS_2                          16                            10
  CLUS_3                          30                            32
  CLUS_4                          17                            16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q22.1) MUTATED       45     35     15      8
  DEL PEAK 12(4Q22.1) WILD-TYPE     21     31     20      3
D43V7, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          45                            21
  CLUS_2                          35                            31
  CLUS_3                          15                            20
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q22.1) MUTATED       43     14     46
  DEL PEAK 12(4Q22.1) WILD-TYPE     19      8     48
D43V8, multiclass
        clus
vv       DEL PEAK 12(4Q22.1) MUTATED DEL PEAK 12(4Q22.1) WILD-TYPE
  CLUS_1                          43                            19
  CLUS_2                          14                             8
  CLUS_3                          46                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 13(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       47     16     36
  DEL PEAK 13(4Q34.3) WILD-TYPE     18     28     39
D44V1, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          47                            18
  CLUS_2                          16                            28
  CLUS_3                          36                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       51     12     36
  DEL PEAK 13(4Q34.3) WILD-TYPE     25     20     40
D44V2, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          51                            25
  CLUS_2                          12                            20
  CLUS_3                          36                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4Q34.3) MUTATED       32      2     16     16      1
  DEL PEAK 13(4Q34.3) WILD-TYPE     14      9     10     15     10
D44V3, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          32                            14
  CLUS_2                           2                             9
  CLUS_3                          16                            10
  CLUS_4                          16                            15
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       27     34      6
  DEL PEAK 13(4Q34.3) WILD-TYPE     12     40      6
D44V4, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          27                            12
  CLUS_2                          34                            40
  CLUS_3                           6                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       56     41      2
  DEL PEAK 13(4Q34.3) WILD-TYPE     28     46     10
D44V5, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          41                            46
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q34.3) MUTATED       44     14     30     11
  DEL PEAK 13(4Q34.3) WILD-TYPE     18     12     32     22
D44V6, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            18
  CLUS_2                          14                            12
  CLUS_3                          30                            32
  CLUS_4                          11                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4Q34.3) MUTATED       44     31     14      8
  DEL PEAK 13(4Q34.3) WILD-TYPE     22     35     21      3
D44V7, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            22
  CLUS_2                          31                            35
  CLUS_3                          14                            21
  CLUS_4                           8                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4Q34.3) MUTATED       44     13     40
  DEL PEAK 13(4Q34.3) WILD-TYPE     18      9     54
D44V8, multiclass
        clus
vv       DEL PEAK 13(4Q34.3) MUTATED DEL PEAK 13(4Q34.3) WILD-TYPE
  CLUS_1                          44                            18
  CLUS_2                          13                             9
  CLUS_3                          40                            54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 14(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       49     17     46
  DEL PEAK 14(5Q12.1) WILD-TYPE     16     27     29
D45V1, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          49                            16
  CLUS_2                          17                            27
  CLUS_3                          46                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       53     10     49
  DEL PEAK 14(5Q12.1) WILD-TYPE     23     22     27
D45V2, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          53                            23
  CLUS_2                          10                            22
  CLUS_3                          49                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(5Q12.1) MUTATED       28      5     18     14      7
  DEL PEAK 14(5Q12.1) WILD-TYPE     18      6      8     17      4
D45V3, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          28                            18
  CLUS_2                           5                             6
  CLUS_3                          18                             8
  CLUS_4                          14                            17
  CLUS_5                           7                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       22     43      7
  DEL PEAK 14(5Q12.1) WILD-TYPE     17     31      5
D45V4, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          22                            17
  CLUS_2                          43                            31
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       56     52      3
  DEL PEAK 14(5Q12.1) WILD-TYPE     28     35      9
D45V5, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          56                            28
  CLUS_2                          52                            35
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q12.1) MUTATED       46     12     32     21
  DEL PEAK 14(5Q12.1) WILD-TYPE     16     14     30     12
D45V6, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          46                            16
  CLUS_2                          12                            14
  CLUS_3                          32                            30
  CLUS_4                          21                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q12.1) MUTATED       44     41     19      5
  DEL PEAK 14(5Q12.1) WILD-TYPE     22     25     16      6
D45V7, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          44                            22
  CLUS_2                          41                            25
  CLUS_3                          19                            16
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q12.1) MUTATED       45     11     53
  DEL PEAK 14(5Q12.1) WILD-TYPE     17     11     41
D45V8, multiclass
        clus
vv       DEL PEAK 14(5Q12.1) MUTATED DEL PEAK 14(5Q12.1) WILD-TYPE
  CLUS_1                          45                            17
  CLUS_2                          11                            11
  CLUS_3                          53                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       34     11     29
  DEL PEAK 15(6P25.3) WILD-TYPE     31     33     46
D46V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          34                            31
  CLUS_2                          11                            33
  CLUS_3                          29                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       38      7     29
  DEL PEAK 15(6P25.3) WILD-TYPE     38     25     47
D46V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          38                            38
  CLUS_2                           7                            25
  CLUS_3                          29                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(6P25.3) MUTATED       21      1     12      9      2
  DEL PEAK 15(6P25.3) WILD-TYPE     25     10     14     22      9
D46V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          21                            25
  CLUS_2                           1                            10
  CLUS_3                          12                            14
  CLUS_4                           9                            22
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       17     24      4
  DEL PEAK 15(6P25.3) WILD-TYPE     22     50      8
D46V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          17                            22
  CLUS_2                          24                            50
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       40     30      3
  DEL PEAK 15(6P25.3) WILD-TYPE     44     57      9
D46V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          40                            44
  CLUS_2                          30                            57
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       31     10     26      6
  DEL PEAK 15(6P25.3) WILD-TYPE     31     16     36     27
D46V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            31
  CLUS_2                          10                            16
  CLUS_3                          26                            36
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       31     21     15      5
  DEL PEAK 15(6P25.3) WILD-TYPE     35     45     20      6
D46V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            35
  CLUS_2                          21                            45
  CLUS_3                          15                            20
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       31     10     31
  DEL PEAK 15(6P25.3) WILD-TYPE     31     12     63
D46V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          31                            31
  CLUS_2                          10                            12
  CLUS_3                          31                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 16(6Q16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       18      9     28
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     35     47
D47V1, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           9                            35
  CLUS_3                          28                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       22      7     26
  DEL PEAK 16(6Q16.3) WILD-TYPE     54     25     50
D47V2, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          22                            54
  CLUS_2                           7                            25
  CLUS_3                          26                            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(6Q16.3) MUTATED       15      1     14      9      1
  DEL PEAK 16(6Q16.3) WILD-TYPE     31     10     12     22     10
D47V3, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          15                            31
  CLUS_2                           1                            10
  CLUS_3                          14                            12
  CLUS_4                           9                            22
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       14     25      1
  DEL PEAK 16(6Q16.3) WILD-TYPE     25     49     11
D47V4, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          14                            25
  CLUS_2                          25                            49
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       23     31      1
  DEL PEAK 16(6Q16.3) WILD-TYPE     61     56     11
D47V5, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          23                            61
  CLUS_2                          31                            56
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q16.3) MUTATED       15      9     22      9
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     17     40     24
D47V6, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            17
  CLUS_3                          22                            40
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q16.3) MUTATED       17     21     12      5
  DEL PEAK 16(6Q16.3) WILD-TYPE     49     45     23      6
D47V7, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          21                            45
  CLUS_3                          12                            23
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q16.3) MUTATED       15      9     31
  DEL PEAK 16(6Q16.3) WILD-TYPE     47     13     63
D47V8, multiclass
        clus
vv       DEL PEAK 16(6Q16.3) MUTATED DEL PEAK 16(6Q16.3) WILD-TYPE
  CLUS_1                          15                            47
  CLUS_2                           9                            13
  CLUS_3                          31                            63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 17(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       16      9     25
  DEL PEAK 17(6Q26) WILD-TYPE     49     35     50
D48V1, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        16                          49
  CLUS_2                         9                          35
  CLUS_3                        25                          50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       20      8     22
  DEL PEAK 17(6Q26) WILD-TYPE     56     24     54
D48V2, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        20                          56
  CLUS_2                         8                          24
  CLUS_3                        22                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(6Q26) MUTATED       11      1     13     10      1
  DEL PEAK 17(6Q26) WILD-TYPE     35     10     13     21     10
D48V3, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        11                          35
  CLUS_2                         1                          10
  CLUS_3                        13                          13
  CLUS_4                        10                          21
  CLUS_5                         1                          10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       10     25      1
  DEL PEAK 17(6Q26) WILD-TYPE     29     49     11
D48V4, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        10                          29
  CLUS_2                        25                          49
  CLUS_3                         1                          11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       21     28      1
  DEL PEAK 17(6Q26) WILD-TYPE     63     59     11
D48V5, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        21                          63
  CLUS_2                        28                          59
  CLUS_3                         1                          11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       14      8     19      9
  DEL PEAK 17(6Q26) WILD-TYPE     48     18     43     24
D48V6, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        14                          48
  CLUS_2                         8                          18
  CLUS_3                        19                          43
  CLUS_4                         9                          24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       15     20     10      3
  DEL PEAK 17(6Q26) WILD-TYPE     51     46     25      8
D48V7, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        15                          51
  CLUS_2                        20                          46
  CLUS_3                        10                          25
  CLUS_4                         3                           8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       13      8     27
  DEL PEAK 17(6Q26) WILD-TYPE     49     14     67
D48V8, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        13                          49
  CLUS_2                         8                          14
  CLUS_3                        27                          67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 18(7Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       25     11     20
  DEL PEAK 18(7Q31.1) WILD-TYPE     40     33     55
D49V1, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                          11                            33
  CLUS_3                          20                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       30      8     18
  DEL PEAK 18(7Q31.1) WILD-TYPE     46     24     58
D49V2, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          30                            46
  CLUS_2                           8                            24
  CLUS_3                          18                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(7Q31.1) MUTATED       16      1      4     12      1
  DEL PEAK 18(7Q31.1) WILD-TYPE     30     10     22     19     10
D49V3, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          16                            30
  CLUS_2                           1                            10
  CLUS_3                           4                            22
  CLUS_4                          12                            19
  CLUS_5                           1                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       13     18      3
  DEL PEAK 18(7Q31.1) WILD-TYPE     26     56      9
D49V4, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                          18                            56
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       30     23      3
  DEL PEAK 18(7Q31.1) WILD-TYPE     54     64      9
D49V5, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          30                            54
  CLUS_2                          23                            64
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q31.1) MUTATED       26      5     15     10
  DEL PEAK 18(7Q31.1) WILD-TYPE     36     21     47     23
D49V6, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          26                            36
  CLUS_2                           5                            21
  CLUS_3                          15                            47
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(7Q31.1) MUTATED       27     14     11      3
  DEL PEAK 18(7Q31.1) WILD-TYPE     39     52     24      8
D49V7, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          27                            39
  CLUS_2                          14                            52
  CLUS_3                          11                            24
  CLUS_4                           3                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(7Q31.1) MUTATED       27      4     24
  DEL PEAK 18(7Q31.1) WILD-TYPE     35     18     70
D49V8, multiclass
        clus
vv       DEL PEAK 18(7Q31.1) MUTATED DEL PEAK 18(7Q31.1) WILD-TYPE
  CLUS_1                          27                            35
  CLUS_2                           4                            18
  CLUS_3                          24                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 19(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       25     15     27
  DEL PEAK 19(7Q36.3) WILD-TYPE     40     29     48
D50V1, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                          15                            29
  CLUS_3                          27                            48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       30     12     25
  DEL PEAK 19(7Q36.3) WILD-TYPE     46     20     51
D50V2, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          30                            46
  CLUS_2                          12                            20
  CLUS_3                          25                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(7Q36.3) MUTATED       17      4      6     15      2
  DEL PEAK 19(7Q36.3) WILD-TYPE     29      7     20     16      9
D50V3, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          17                            29
  CLUS_2                           4                             7
  CLUS_3                           6                            20
  CLUS_4                          15                            16
  CLUS_5                           2                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       15     26      3
  DEL PEAK 19(7Q36.3) WILD-TYPE     24     48      9
D50V4, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          15                            24
  CLUS_2                          26                            48
  CLUS_3                           3                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       31     34      2
  DEL PEAK 19(7Q36.3) WILD-TYPE     53     53     10
D50V5, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          31                            53
  CLUS_2                          34                            53
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       27      6     19     15
  DEL PEAK 19(7Q36.3) WILD-TYPE     35     20     43     18
D50V6, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          27                            35
  CLUS_2                           6                            20
  CLUS_3                          19                            43
  CLUS_4                          15                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(7Q36.3) MUTATED       28     24      9      5
  DEL PEAK 19(7Q36.3) WILD-TYPE     38     42     26      6
D50V7, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          28                            38
  CLUS_2                          24                            42
  CLUS_3                           9                            26
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(7Q36.3) MUTATED       28      5     33
  DEL PEAK 19(7Q36.3) WILD-TYPE     34     17     61
D50V8, multiclass
        clus
vv       DEL PEAK 19(7Q36.3) MUTATED DEL PEAK 19(7Q36.3) WILD-TYPE
  CLUS_1                          28                            34
  CLUS_2                           5                            17
  CLUS_3                          33                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 20(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       30     11     49
  DEL PEAK 20(8P23.2) WILD-TYPE     35     33     26
D51V1, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          30                            35
  CLUS_2                          11                            33
  CLUS_3                          49                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       32     12     46
  DEL PEAK 20(8P23.2) WILD-TYPE     44     20     30
D51V2, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          32                            44
  CLUS_2                          12                            20
  CLUS_3                          46                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(8P23.2) MUTATED       16      6     11     19      4
  DEL PEAK 20(8P23.2) WILD-TYPE     30      5     15     12      7
D51V3, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          16                            30
  CLUS_2                           6                             5
  CLUS_3                          11                            15
  CLUS_4                          19                            12
  CLUS_5                           4                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       13     38      5
  DEL PEAK 20(8P23.2) WILD-TYPE     26     36      7
D51V4, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                          38                            36
  CLUS_3                           5                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       33     53      4
  DEL PEAK 20(8P23.2) WILD-TYPE     51     34      8
D51V5, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          33                            51
  CLUS_2                          53                            34
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       24     11     36     19
  DEL PEAK 20(8P23.2) WILD-TYPE     38     15     26     14
D51V6, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          24                            38
  CLUS_2                          11                            15
  CLUS_3                          36                            26
  CLUS_4                          19                            14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(8P23.2) MUTATED       25     41     15      5
  DEL PEAK 20(8P23.2) WILD-TYPE     41     25     20      6
D51V7, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          25                            41
  CLUS_2                          41                            25
  CLUS_3                          15                            20
  CLUS_4                           5                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(8P23.2) MUTATED       25      9     52
  DEL PEAK 20(8P23.2) WILD-TYPE     37     13     42
D51V8, multiclass
        clus
vv       DEL PEAK 20(8P23.2) MUTATED DEL PEAK 20(8P23.2) WILD-TYPE
  CLUS_1                          25                            37
  CLUS_2                           9                            13
  CLUS_3                          52                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 21(8P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       29      7     39
  DEL PEAK 21(8P12) WILD-TYPE     36     37     36
D52V1, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        29                          36
  CLUS_2                         7                          37
  CLUS_3                        39                          36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       31     10     34
  DEL PEAK 21(8P12) WILD-TYPE     45     22     42
D52V2, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        31                          45
  CLUS_2                        10                          22
  CLUS_3                        34                          42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(8P12) MUTATED       15      6      9     12      4
  DEL PEAK 21(8P12) WILD-TYPE     31      5     17     19      7
D52V3, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        15                          31
  CLUS_2                         6                           5
  CLUS_3                         9                          17
  CLUS_4                        12                          19
  CLUS_5                         4                           7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       13     30      3
  DEL PEAK 21(8P12) WILD-TYPE     26     44      9
D52V4, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        13                          26
  CLUS_2                        30                          44
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       31     41      3
  DEL PEAK 21(8P12) WILD-TYPE     53     46      9
D52V5, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        31                          53
  CLUS_2                        41                          46
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(8P12) MUTATED       24      9     27     15
  DEL PEAK 21(8P12) WILD-TYPE     38     17     35     18
D52V6, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        24                          38
  CLUS_2                         9                          17
  CLUS_3                        27                          35
  CLUS_4                        15                          18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(8P12) MUTATED       23     31     14      5
  DEL PEAK 21(8P12) WILD-TYPE     43     35     21      6
D52V7, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        23                          43
  CLUS_2                        31                          35
  CLUS_3                        14                          21
  CLUS_4                         5                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(8P12) MUTATED       24      7     42
  DEL PEAK 21(8P12) WILD-TYPE     38     15     52
D52V8, multiclass
        clus
vv       DEL PEAK 21(8P12) MUTATED DEL PEAK 21(8P12) WILD-TYPE
  CLUS_1                        24                          38
  CLUS_2                         7                          15
  CLUS_3                        42                          52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 22(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       42     23     43
  DEL PEAK 22(9P23) WILD-TYPE     23     21     32
D53V1, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        42                          23
  CLUS_2                        23                          21
  CLUS_3                        43                          32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       48     22     38
  DEL PEAK 22(9P23) WILD-TYPE     28     10     38
D53V2, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        48                          28
  CLUS_2                        22                          10
  CLUS_3                        38                          38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(9P23) MUTATED       28      3     13     20      6
  DEL PEAK 22(9P23) WILD-TYPE     18      8     13     11      5
D53V3, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        28                          18
  CLUS_2                         3                           8
  CLUS_3                        13                          13
  CLUS_4                        20                          11
  CLUS_5                         6                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       25     42      3
  DEL PEAK 22(9P23) WILD-TYPE     14     32      9
D53V4, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        25                          14
  CLUS_2                        42                          32
  CLUS_3                         3                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       52     51      5
  DEL PEAK 22(9P23) WILD-TYPE     32     36      7
D53V5, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        52                          32
  CLUS_2                        51                          36
  CLUS_3                         5                           7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P23) MUTATED       38     16     33     21
  DEL PEAK 22(9P23) WILD-TYPE     24     10     29     12
D53V6, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        38                          24
  CLUS_2                        16                          10
  CLUS_3                        33                          29
  CLUS_4                        21                          12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(9P23) MUTATED       40     40     19      7
  DEL PEAK 22(9P23) WILD-TYPE     26     26     16      4
D53V7, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        40                          26
  CLUS_2                        40                          26
  CLUS_3                        19                          16
  CLUS_4                         7                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(9P23) MUTATED       39     14     53
  DEL PEAK 22(9P23) WILD-TYPE     23      8     41
D53V8, multiclass
        clus
vv       DEL PEAK 22(9P23) MUTATED DEL PEAK 22(9P23) WILD-TYPE
  CLUS_1                        39                          23
  CLUS_2                        14                           8
  CLUS_3                        53                          41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 23(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       46     25     70
  DEL PEAK 23(9P21.3) WILD-TYPE     19     19      5
D54V1, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          46                            19
  CLUS_2                          25                            19
  CLUS_3                          70                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       55     23     63
  DEL PEAK 23(9P21.3) WILD-TYPE     21      9     13
D54V2, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          55                            21
  CLUS_2                          23                             9
  CLUS_3                          63                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(9P21.3) MUTATED       33      7     23     26      8
  DEL PEAK 23(9P21.3) WILD-TYPE     13      4      3      5      3
D54V3, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          33                            13
  CLUS_2                           7                             4
  CLUS_3                          23                             3
  CLUS_4                          26                             5
  CLUS_5                           8                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       27     63      7
  DEL PEAK 23(9P21.3) WILD-TYPE     12     11      5
D54V4, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          27                            12
  CLUS_2                          63                            11
  CLUS_3                           7                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       59     74      8
  DEL PEAK 23(9P21.3) WILD-TYPE     25     13      4
D54V5, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          59                            25
  CLUS_2                          74                            13
  CLUS_3                           8                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       42     19     53     27
  DEL PEAK 23(9P21.3) WILD-TYPE     20      7      9      6
D54V6, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          42                            20
  CLUS_2                          19                             7
  CLUS_3                          53                             9
  CLUS_4                          27                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(9P21.3) MUTATED       47     56     27      9
  DEL PEAK 23(9P21.3) WILD-TYPE     19     10      8      2
D54V7, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          47                            19
  CLUS_2                          56                            10
  CLUS_3                          27                             8
  CLUS_4                           9                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(9P21.3) MUTATED       43     17     79
  DEL PEAK 23(9P21.3) WILD-TYPE     19      5     15
D54V8, multiclass
        clus
vv       DEL PEAK 23(9P21.3) MUTATED DEL PEAK 23(9P21.3) WILD-TYPE
  CLUS_1                          43                            19
  CLUS_2                          17                             5
  CLUS_3                          79                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 24(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       15      6     33
  DEL PEAK 24(10P15.3) WILD-TYPE     50     38     42
D55V1, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           15                             50
  CLUS_2                            6                             38
  CLUS_3                           33                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       14     13     27
  DEL PEAK 24(10P15.3) WILD-TYPE     62     19     49
D55V2, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           14                             62
  CLUS_2                           13                             19
  CLUS_3                           27                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(10P15.3) MUTATED       10      4     12     10      3
  DEL PEAK 24(10P15.3) WILD-TYPE     36      7     14     21      8
D55V3, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           10                             36
  CLUS_2                            4                              7
  CLUS_3                           12                             14
  CLUS_4                           10                             21
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED        6     27      6
  DEL PEAK 24(10P15.3) WILD-TYPE     33     47      6
D55V4, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                            6                             33
  CLUS_2                           27                             47
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       18     35      1
  DEL PEAK 24(10P15.3) WILD-TYPE     66     52     11
D55V5, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           18                             66
  CLUS_2                           35                             52
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       12      7     28      7
  DEL PEAK 24(10P15.3) WILD-TYPE     50     19     34     26
D55V6, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             19
  CLUS_3                           28                             34
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10P15.3) MUTATED       13     26     11      4
  DEL PEAK 24(10P15.3) WILD-TYPE     53     40     24      7
D55V7, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           13                             53
  CLUS_2                           26                             40
  CLUS_3                           11                             24
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10P15.3) MUTATED       12      7     35
  DEL PEAK 24(10P15.3) WILD-TYPE     50     15     59
D55V8, multiclass
        clus
vv       DEL PEAK 24(10P15.3) MUTATED DEL PEAK 24(10P15.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             15
  CLUS_3                           35                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 25(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        9      5     38
  DEL PEAK 25(10P11.21) WILD-TYPE     56     39     37
D56V1, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             9                              56
  CLUS_2                             5                              39
  CLUS_3                            38                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        9     10     33
  DEL PEAK 25(10P11.21) WILD-TYPE     67     22     43
D56V2, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             9                              67
  CLUS_2                            10                              22
  CLUS_3                            33                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(10P11.21) MUTATED        4      5     11     13      3
  DEL PEAK 25(10P11.21) WILD-TYPE     42      6     15     18      8
D56V3, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             4                              42
  CLUS_2                             5                               6
  CLUS_3                            11                              15
  CLUS_4                            13                              18
  CLUS_5                             3                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        2     32      2
  DEL PEAK 25(10P11.21) WILD-TYPE     37     42     10
D56V4, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             2                              37
  CLUS_2                            32                              42
  CLUS_3                             2                              10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED       10     40      1
  DEL PEAK 25(10P11.21) WILD-TYPE     74     47     11
D56V5, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                            10                              74
  CLUS_2                            40                              47
  CLUS_3                             1                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        7      3     27     14
  DEL PEAK 25(10P11.21) WILD-TYPE     55     23     35     19
D56V6, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                              55
  CLUS_2                             3                              23
  CLUS_3                            27                              35
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10P11.21) MUTATED        8     29     10      4
  DEL PEAK 25(10P11.21) WILD-TYPE     58     37     25      7
D56V7, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             8                              58
  CLUS_2                            29                              37
  CLUS_3                            10                              25
  CLUS_4                             4                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10P11.21) MUTATED        7      3     41
  DEL PEAK 25(10P11.21) WILD-TYPE     55     19     53
D56V8, multiclass
        clus
vv       DEL PEAK 25(10P11.21) MUTATED DEL PEAK 25(10P11.21) WILD-TYPE
  CLUS_1                             7                              55
  CLUS_2                             3                              19
  CLUS_3                            41                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 26(10Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       11      6     29
  DEL PEAK 26(10Q21.1) WILD-TYPE     54     38     46
D57V1, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                            6                             38
  CLUS_3                           29                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       12      7     27
  DEL PEAK 26(10Q21.1) WILD-TYPE     64     25     49
D57V2, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           12                             64
  CLUS_2                            7                             25
  CLUS_3                           27                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(10Q21.1) MUTATED        9      3     11      9      3
  DEL PEAK 26(10Q21.1) WILD-TYPE     37      8     15     22      8
D57V3, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                            9                             37
  CLUS_2                            3                              8
  CLUS_3                           11                             15
  CLUS_4                            9                             22
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED        7     25      3
  DEL PEAK 26(10Q21.1) WILD-TYPE     32     49      9
D57V4, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                            7                             32
  CLUS_2                           25                             49
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       15     30      1
  DEL PEAK 26(10Q21.1) WILD-TYPE     69     57     11
D57V5, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           15                             69
  CLUS_2                           30                             57
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q21.1) MUTATED       11      4     23      8
  DEL PEAK 26(10Q21.1) WILD-TYPE     51     22     39     25
D57V6, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           11                             51
  CLUS_2                            4                             22
  CLUS_3                           23                             39
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(10Q21.1) MUTATED       12     21      8      4
  DEL PEAK 26(10Q21.1) WILD-TYPE     54     45     27      7
D57V7, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           12                             54
  CLUS_2                           21                             45
  CLUS_3                            8                             27
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(10Q21.1) MUTATED       10      4     31
  DEL PEAK 26(10Q21.1) WILD-TYPE     52     18     63
D57V8, multiclass
        clus
vv       DEL PEAK 26(10Q21.1) MUTATED DEL PEAK 26(10Q21.1) WILD-TYPE
  CLUS_1                           10                             52
  CLUS_2                            4                             18
  CLUS_3                           31                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 27(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       22      9     34
  DEL PEAK 27(10Q23.31) WILD-TYPE     43     35     41
D58V1, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            22                              43
  CLUS_2                             9                              35
  CLUS_3                            34                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       20     10     35
  DEL PEAK 27(10Q23.31) WILD-TYPE     56     22     41
D58V2, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            20                              56
  CLUS_2                            10                              22
  CLUS_3                            35                              41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10Q23.31) MUTATED       15      3     12     12      5
  DEL PEAK 27(10Q23.31) WILD-TYPE     31      8     14     19      6
D58V3, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            15                              31
  CLUS_2                             3                               8
  CLUS_3                            12                              14
  CLUS_4                            12                              19
  CLUS_5                             5                               6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       13     31      3
  DEL PEAK 27(10Q23.31) WILD-TYPE     26     43      9
D58V4, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            13                              26
  CLUS_2                            31                              43
  CLUS_3                             3                               9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       26     37      2
  DEL PEAK 27(10Q23.31) WILD-TYPE     58     50     10
D58V5, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            26                              58
  CLUS_2                            37                              50
  CLUS_3                             2                              10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       20      7     28     10
  DEL PEAK 27(10Q23.31) WILD-TYPE     42     19     34     23
D58V6, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             7                              19
  CLUS_3                            28                              34
  CLUS_4                            10                              23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10Q23.31) MUTATED       22     29     10      3
  DEL PEAK 27(10Q23.31) WILD-TYPE     44     37     25      8
D58V7, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            22                              44
  CLUS_2                            29                              37
  CLUS_3                            10                              25
  CLUS_4                             3                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10Q23.31) MUTATED       19      7     38
  DEL PEAK 27(10Q23.31) WILD-TYPE     43     15     56
D58V8, multiclass
        clus
vv       DEL PEAK 27(10Q23.31) MUTATED DEL PEAK 27(10Q23.31) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             7                              15
  CLUS_3                            38                              56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 28(11P15.4) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       27     14     38
  DEL PEAK 28(11P15.4) WILD-TYPE     38     30     37
D59V1, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           27                             38
  CLUS_2                           14                             30
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       30      9     40
  DEL PEAK 28(11P15.4) WILD-TYPE     46     23     36
D59V2, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           30                             46
  CLUS_2                            9                             23
  CLUS_3                           40                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(11P15.4) MUTATED       19      4     13     16      3
  DEL PEAK 28(11P15.4) WILD-TYPE     27      7     13     15      8
D59V3, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           19                             27
  CLUS_2                            4                              7
  CLUS_3                           13                             13
  CLUS_4                           16                             15
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       15     35      5
  DEL PEAK 28(11P15.4) WILD-TYPE     24     39      7
D59V4, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           15                             24
  CLUS_2                           35                             39
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       33     40      6
  DEL PEAK 28(11P15.4) WILD-TYPE     51     47      6
D59V5, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           33                             51
  CLUS_2                           40                             47
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       23     12     33     11
  DEL PEAK 28(11P15.4) WILD-TYPE     39     14     29     22
D59V6, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           23                             39
  CLUS_2                           12                             14
  CLUS_3                           33                             29
  CLUS_4                           11                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P15.4) MUTATED       26     31     16      4
  DEL PEAK 28(11P15.4) WILD-TYPE     40     35     19      7
D59V7, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           26                             40
  CLUS_2                           31                             35
  CLUS_3                           16                             19
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P15.4) MUTATED       23     11     43
  DEL PEAK 28(11P15.4) WILD-TYPE     39     11     51
D59V8, multiclass
        clus
vv       DEL PEAK 28(11P15.4) MUTATED DEL PEAK 28(11P15.4) WILD-TYPE
  CLUS_1                           23                             39
  CLUS_2                           11                             11
  CLUS_3                           43                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 29(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       24      9     48
  DEL PEAK 29(11Q25) WILD-TYPE     41     35     27
D60V1, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         24                           41
  CLUS_2                          9                           35
  CLUS_3                         48                           27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       29     10     42
  DEL PEAK 29(11Q25) WILD-TYPE     47     22     34
D60V2, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         29                           47
  CLUS_2                         10                           22
  CLUS_3                         42                           34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(11Q25) MUTATED       17      5     12     16      6
  DEL PEAK 29(11Q25) WILD-TYPE     29      6     14     15      5
D60V3, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         17                           29
  CLUS_2                          5                            6
  CLUS_3                         12                           14
  CLUS_4                         16                           15
  CLUS_5                          6                            5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       14     38      4
  DEL PEAK 29(11Q25) WILD-TYPE     25     36      8
D60V4, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         14                           25
  CLUS_2                         38                           36
  CLUS_3                          4                            8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       30     46      4
  DEL PEAK 29(11Q25) WILD-TYPE     54     41      8
D60V5, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         30                           54
  CLUS_2                         46                           41
  CLUS_3                          4                            8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       20     10     33     17
  DEL PEAK 29(11Q25) WILD-TYPE     42     16     29     16
D60V6, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         20                           42
  CLUS_2                         10                           16
  CLUS_3                         33                           29
  CLUS_4                         17                           16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(11Q25) MUTATED       23     37     16      2
  DEL PEAK 29(11Q25) WILD-TYPE     43     29     19      9
D60V7, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         23                           43
  CLUS_2                         37                           29
  CLUS_3                         16                           19
  CLUS_4                          2                            9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(11Q25) MUTATED       19     10     49
  DEL PEAK 29(11Q25) WILD-TYPE     43     12     45
D60V8, multiclass
        clus
vv       DEL PEAK 29(11Q25) MUTATED DEL PEAK 29(11Q25) WILD-TYPE
  CLUS_1                         19                           43
  CLUS_2                         10                           12
  CLUS_3                         49                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 30(12Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       22     13     16
  DEL PEAK 30(12Q23.1) WILD-TYPE     43     31     59
D61V1, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           22                             43
  CLUS_2                           13                             31
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       28     10     13
  DEL PEAK 30(12Q23.1) WILD-TYPE     48     22     63
D61V2, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           28                             48
  CLUS_2                           10                             22
  CLUS_3                           13                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(12Q23.1) MUTATED       15      3      3      6      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     31      8     23     25      9
D61V3, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           15                             31
  CLUS_2                            3                              8
  CLUS_3                            3                             23
  CLUS_4                            6                             25
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       12     13      4
  DEL PEAK 30(12Q23.1) WILD-TYPE     27     61      8
D61V4, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                           13                             61
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       30     19      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     54     68     10
D61V5, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           30                             54
  CLUS_2                           19                             68
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q23.1) MUTATED       20     11     14      6
  DEL PEAK 30(12Q23.1) WILD-TYPE     42     15     48     27
D61V6, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           11                             15
  CLUS_3                           14                             48
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q23.1) MUTATED       25     16      7      2
  DEL PEAK 30(12Q23.1) WILD-TYPE     41     50     28      9
D61V7, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           25                             41
  CLUS_2                           16                             50
  CLUS_3                            7                             28
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q23.1) MUTATED       20     10     20
  DEL PEAK 30(12Q23.1) WILD-TYPE     42     12     74
D61V8, multiclass
        clus
vv       DEL PEAK 30(12Q23.1) MUTATED DEL PEAK 30(12Q23.1) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           10                             12
  CLUS_3                           20                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 31(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       24      9     43
  DEL PEAK 31(13Q12.11) WILD-TYPE     41     35     32
D62V1, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            24                              41
  CLUS_2                             9                              35
  CLUS_3                            43                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       24     11     41
  DEL PEAK 31(13Q12.11) WILD-TYPE     52     21     35
D62V2, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            24                              52
  CLUS_2                            11                              21
  CLUS_3                            41                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(13Q12.11) MUTATED       14      3     10     21      7
  DEL PEAK 31(13Q12.11) WILD-TYPE     32      8     16     10      4
D62V3, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            14                              32
  CLUS_2                             3                               8
  CLUS_3                            10                              16
  CLUS_4                            21                              10
  CLUS_5                             7                               4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       13     41      1
  DEL PEAK 31(13Q12.11) WILD-TYPE     26     33     11
D62V4, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            13                              26
  CLUS_2                            41                              33
  CLUS_3                             1                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       25     46      5
  DEL PEAK 31(13Q12.11) WILD-TYPE     59     41      7
D62V5, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            25                              59
  CLUS_2                            46                              41
  CLUS_3                             5                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       19      7     30     20
  DEL PEAK 31(13Q12.11) WILD-TYPE     43     19     32     13
D62V6, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             7                              19
  CLUS_3                            30                              32
  CLUS_4                            20                              13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(13Q12.11) MUTATED       20     37     11      5
  DEL PEAK 31(13Q12.11) WILD-TYPE     46     29     24      6
D62V7, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            20                              46
  CLUS_2                            37                              29
  CLUS_3                            11                              24
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(13Q12.11) MUTATED       18      7     48
  DEL PEAK 31(13Q12.11) WILD-TYPE     44     15     46
D62V8, multiclass
        clus
vv       DEL PEAK 31(13Q12.11) MUTATED DEL PEAK 31(13Q12.11) WILD-TYPE
  CLUS_1                            18                              44
  CLUS_2                             7                              15
  CLUS_3                            48                              46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       23     10     41
  DEL PEAK 32(13Q14.2) WILD-TYPE     42     34     34
D63V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           23                             42
  CLUS_2                           10                             34
  CLUS_3                           41                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       25      8     41
  DEL PEAK 32(13Q14.2) WILD-TYPE     51     24     35
D63V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           25                             51
  CLUS_2                            8                             24
  CLUS_3                           41                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(13Q14.2) MUTATED       16      3     11     21      8
  DEL PEAK 32(13Q14.2) WILD-TYPE     30      8     15     10      3
D63V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           16                             30
  CLUS_2                            3                              8
  CLUS_3                           11                             15
  CLUS_4                           21                             10
  CLUS_5                            8                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       13     43      3
  DEL PEAK 32(13Q14.2) WILD-TYPE     26     31      9
D63V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           13                             26
  CLUS_2                           43                             31
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       25     44      4
  DEL PEAK 32(13Q14.2) WILD-TYPE     59     43      8
D63V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           25                             59
  CLUS_2                           44                             43
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       21      5     31     16
  DEL PEAK 32(13Q14.2) WILD-TYPE     41     21     31     17
D63V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           21                             41
  CLUS_2                            5                             21
  CLUS_3                           31                             31
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       21     36     10      4
  DEL PEAK 32(13Q14.2) WILD-TYPE     45     30     25      7
D63V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           21                             45
  CLUS_2                           36                             30
  CLUS_3                           10                             25
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       20      5     46
  DEL PEAK 32(13Q14.2) WILD-TYPE     42     17     48
D63V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                            5                             17
  CLUS_3                           46                             48
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 33(13Q21.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       22     10     37
  DEL PEAK 33(13Q21.31) WILD-TYPE     43     34     38
D64V1, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            22                              43
  CLUS_2                            10                              34
  CLUS_3                            37                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       25      8     36
  DEL PEAK 33(13Q21.31) WILD-TYPE     51     24     40
D64V2, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            25                              51
  CLUS_2                             8                              24
  CLUS_3                            36                              40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(13Q21.31) MUTATED       16      3     11     17      7
  DEL PEAK 33(13Q21.31) WILD-TYPE     30      8     15     14      4
D64V3, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            16                              30
  CLUS_2                             3                               8
  CLUS_3                            11                              15
  CLUS_4                            17                              14
  CLUS_5                             7                               4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       13     38      3
  DEL PEAK 33(13Q21.31) WILD-TYPE     26     36      9
D64V4, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            13                              26
  CLUS_2                            38                              36
  CLUS_3                             3                               9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       25     40      4
  DEL PEAK 33(13Q21.31) WILD-TYPE     59     47      8
D64V5, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            25                              59
  CLUS_2                            40                              47
  CLUS_3                             4                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.31) MUTATED       20      6     29     14
  DEL PEAK 33(13Q21.31) WILD-TYPE     42     20     33     19
D64V6, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            20                              42
  CLUS_2                             6                              20
  CLUS_3                            29                              33
  CLUS_4                            14                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q21.31) MUTATED       19     32     11      5
  DEL PEAK 33(13Q21.31) WILD-TYPE     47     34     24      6
D64V7, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            19                              47
  CLUS_2                            32                              34
  CLUS_3                            11                              24
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q21.31) MUTATED       19      6     42
  DEL PEAK 33(13Q21.31) WILD-TYPE     43     16     52
D64V8, multiclass
        clus
vv       DEL PEAK 33(13Q21.31) MUTATED DEL PEAK 33(13Q21.31) WILD-TYPE
  CLUS_1                            19                              43
  CLUS_2                             6                              16
  CLUS_3                            42                              52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 34(14Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       28      8     15
  DEL PEAK 34(14Q23.3) WILD-TYPE     37     36     60
D65V1, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           28                             37
  CLUS_2                            8                             36
  CLUS_3                           15                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       29      9     13
  DEL PEAK 34(14Q23.3) WILD-TYPE     47     23     63
D65V2, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           29                             47
  CLUS_2                            9                             23
  CLUS_3                           13                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(14Q23.3) MUTATED       22      1      5      5      4
  DEL PEAK 34(14Q23.3) WILD-TYPE     24     10     21     26      7
D65V3, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           22                             24
  CLUS_2                            1                             10
  CLUS_3                            5                             21
  CLUS_4                            5                             26
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       18     15      4
  DEL PEAK 34(14Q23.3) WILD-TYPE     21     59      8
D65V4, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           18                             21
  CLUS_2                           15                             59
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       30     18      3
  DEL PEAK 34(14Q23.3) WILD-TYPE     54     69      9
D65V5, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           30                             54
  CLUS_2                           18                             69
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q23.3) MUTATED       27      5     13      6
  DEL PEAK 34(14Q23.3) WILD-TYPE     35     21     49     27
D65V6, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           27                             35
  CLUS_2                            5                             21
  CLUS_3                           13                             49
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q23.3) MUTATED       27     16      5      3
  DEL PEAK 34(14Q23.3) WILD-TYPE     39     50     30      8
D65V7, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           16                             50
  CLUS_3                            5                             30
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q23.3) MUTATED       28      4     19
  DEL PEAK 34(14Q23.3) WILD-TYPE     34     18     75
D65V8, multiclass
        clus
vv       DEL PEAK 34(14Q23.3) MUTATED DEL PEAK 34(14Q23.3) WILD-TYPE
  CLUS_1                           28                             34
  CLUS_2                            4                             18
  CLUS_3                           19                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 35(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       26     12     25
  DEL PEAK 35(15Q11.2) WILD-TYPE     39     32     50
D66V1, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           26                             39
  CLUS_2                           12                             32
  CLUS_3                           25                             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       32      8     23
  DEL PEAK 35(15Q11.2) WILD-TYPE     44     24     53
D66V2, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           32                             44
  CLUS_2                            8                             24
  CLUS_3                           23                             53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(15Q11.2) MUTATED       19      2     10      5      5
  DEL PEAK 35(15Q11.2) WILD-TYPE     27      9     16     26      6
D66V3, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           19                             27
  CLUS_2                            2                              9
  CLUS_3                           10                             16
  CLUS_4                            5                             26
  CLUS_5                            5                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       15     22      4
  DEL PEAK 35(15Q11.2) WILD-TYPE     24     52      8
D66V4, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           15                             24
  CLUS_2                           22                             52
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       34     27      2
  DEL PEAK 35(15Q11.2) WILD-TYPE     50     60     10
D66V5, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           34                             50
  CLUS_2                           27                             60
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       19     16     20      8
  DEL PEAK 35(15Q11.2) WILD-TYPE     43     10     42     25
D66V6, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           19                             43
  CLUS_2                           16                             10
  CLUS_3                           20                             42
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(15Q11.2) MUTATED       27     22     10      4
  DEL PEAK 35(15Q11.2) WILD-TYPE     39     44     25      7
D66V7, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           27                             39
  CLUS_2                           22                             44
  CLUS_3                           10                             25
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(15Q11.2) MUTATED       20     15     28
  DEL PEAK 35(15Q11.2) WILD-TYPE     42      7     66
D66V8, multiclass
        clus
vv       DEL PEAK 35(15Q11.2) MUTATED DEL PEAK 35(15Q11.2) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                           15                              7
  CLUS_3                           28                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 36(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       39     10     16
  DEL PEAK 36(16P13.3) WILD-TYPE     26     34     59
D67V1, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           39                             26
  CLUS_2                           10                             34
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       41      8     16
  DEL PEAK 36(16P13.3) WILD-TYPE     35     24     60
D67V2, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           41                             35
  CLUS_2                            8                             24
  CLUS_3                           16                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(16P13.3) MUTATED       24      2      6      2      4
  DEL PEAK 36(16P13.3) WILD-TYPE     22      9     20     29      7
D67V3, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           24                             22
  CLUS_2                            2                              9
  CLUS_3                            6                             20
  CLUS_4                            2                             29
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       18     13      7
  DEL PEAK 36(16P13.3) WILD-TYPE     21     61      5
D67V4, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           18                             21
  CLUS_2                           13                             61
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       44     18      2
  DEL PEAK 36(16P13.3) WILD-TYPE     40     69     10
D67V5, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           44                             40
  CLUS_2                           18                             69
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       37      9     14      4
  DEL PEAK 36(16P13.3) WILD-TYPE     25     17     48     29
D67V6, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           37                             25
  CLUS_2                            9                             17
  CLUS_3                           14                             48
  CLUS_4                            4                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(16P13.3) MUTATED       38     13      9      3
  DEL PEAK 36(16P13.3) WILD-TYPE     28     53     26      8
D67V7, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           38                             28
  CLUS_2                           13                             53
  CLUS_3                            9                             26
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(16P13.3) MUTATED       36      9     18
  DEL PEAK 36(16P13.3) WILD-TYPE     26     13     76
D67V8, multiclass
        clus
vv       DEL PEAK 36(16P13.3) MUTATED DEL PEAK 36(16P13.3) WILD-TYPE
  CLUS_1                           36                             26
  CLUS_2                            9                             13
  CLUS_3                           18                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 37(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       50     18     16
  DEL PEAK 37(16Q23.1) WILD-TYPE     15     26     59
D68V1, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           50                             15
  CLUS_2                           18                             26
  CLUS_3                           16                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       56     11     17
  DEL PEAK 37(16Q23.1) WILD-TYPE     20     21     59
D68V2, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           56                             20
  CLUS_2                           11                             21
  CLUS_3                           17                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(16Q23.1) MUTATED       34      3      5      7      4
  DEL PEAK 37(16Q23.1) WILD-TYPE     12      8     21     24      7
D68V3, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           34                             12
  CLUS_2                            3                              8
  CLUS_3                            5                             21
  CLUS_4                            7                             24
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       27     18      8
  DEL PEAK 37(16Q23.1) WILD-TYPE     12     56      4
D68V4, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           27                             12
  CLUS_2                           18                             56
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       60     22      1
  DEL PEAK 37(16Q23.1) WILD-TYPE     24     65     11
D68V5, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           60                             24
  CLUS_2                           22                             65
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       46     16     14      7
  DEL PEAK 37(16Q23.1) WILD-TYPE     16     10     48     26
D68V6, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           46                             16
  CLUS_2                           16                             10
  CLUS_3                           14                             48
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(16Q23.1) MUTATED       49     17     11      4
  DEL PEAK 37(16Q23.1) WILD-TYPE     17     49     24      7
D68V7, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           49                             17
  CLUS_2                           17                             49
  CLUS_3                           11                             24
  CLUS_4                            4                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(16Q23.1) MUTATED       46     14     21
  DEL PEAK 37(16Q23.1) WILD-TYPE     16      8     73
D68V8, multiclass
        clus
vv       DEL PEAK 37(16Q23.1) MUTATED DEL PEAK 37(16Q23.1) WILD-TYPE
  CLUS_1                           46                             16
  CLUS_2                           14                              8
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 38(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       44     19     23
  DEL PEAK 38(17P12) WILD-TYPE     21     25     52
D69V1, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         44                           21
  CLUS_2                         19                           25
  CLUS_3                         23                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       54     10     22
  DEL PEAK 38(17P12) WILD-TYPE     22     22     54
D69V2, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         54                           22
  CLUS_2                         10                           22
  CLUS_3                         22                           54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(17P12) MUTATED       31      3      9      9      2
  DEL PEAK 38(17P12) WILD-TYPE     15      8     17     22      9
D69V3, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         31                           15
  CLUS_2                          3                            8
  CLUS_3                          9                           17
  CLUS_4                          9                           22
  CLUS_5                          2                            9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       26     22      6
  DEL PEAK 38(17P12) WILD-TYPE     13     52      6
D69V4, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         26                           13
  CLUS_2                         22                           52
  CLUS_3                          6                            6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       56     29      1
  DEL PEAK 38(17P12) WILD-TYPE     28     58     11
D69V5, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         56                           28
  CLUS_2                         29                           58
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17P12) MUTATED       41     17     19      9
  DEL PEAK 38(17P12) WILD-TYPE     21      9     43     24
D69V6, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         41                           21
  CLUS_2                         17                            9
  CLUS_3                         19                           43
  CLUS_4                          9                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(17P12) MUTATED       42     26     12      5
  DEL PEAK 38(17P12) WILD-TYPE     24     40     23      6
D69V7, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         42                           24
  CLUS_2                         26                           40
  CLUS_3                         12                           23
  CLUS_4                          5                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(17P12) MUTATED       41     16     28
  DEL PEAK 38(17P12) WILD-TYPE     21      6     66
D69V8, multiclass
        clus
vv       DEL PEAK 38(17P12) MUTATED DEL PEAK 38(17P12) WILD-TYPE
  CLUS_1                         41                           21
  CLUS_2                         16                            6
  CLUS_3                         28                           66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 39(17Q25.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       11     10     20
  DEL PEAK 39(17Q25.3) WILD-TYPE     54     34     55
D70V1, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           11                             54
  CLUS_2                           10                             34
  CLUS_3                           20                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       19      6     16
  DEL PEAK 39(17Q25.3) WILD-TYPE     57     26     60
D70V2, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           19                             57
  CLUS_2                            6                             26
  CLUS_3                           16                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(17Q25.3) MUTATED       10      4      4      8      2
  DEL PEAK 39(17Q25.3) WILD-TYPE     36      7     22     23      9
D70V3, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           10                             36
  CLUS_2                            4                              7
  CLUS_3                            4                             22
  CLUS_4                            8                             23
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED        8     17      3
  DEL PEAK 39(17Q25.3) WILD-TYPE     31     57      9
D70V4, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                            8                             31
  CLUS_2                           17                             57
  CLUS_3                            3                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       19     22      0
  DEL PEAK 39(17Q25.3) WILD-TYPE     65     65     12
D70V5, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           19                             65
  CLUS_2                           22                             65
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       12      7     12     10
  DEL PEAK 39(17Q25.3) WILD-TYPE     50     19     50     23
D70V6, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            7                             19
  CLUS_3                           12                             50
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(17Q25.3) MUTATED       14     21      3      1
  DEL PEAK 39(17Q25.3) WILD-TYPE     52     45     32     10
D70V7, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           14                             52
  CLUS_2                           21                             45
  CLUS_3                            3                             32
  CLUS_4                            1                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(17Q25.3) MUTATED       12      6     21
  DEL PEAK 39(17Q25.3) WILD-TYPE     50     16     73
D70V8, multiclass
        clus
vv       DEL PEAK 39(17Q25.3) MUTATED DEL PEAK 39(17Q25.3) WILD-TYPE
  CLUS_1                           12                             50
  CLUS_2                            6                             16
  CLUS_3                           21                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 40(18P11.23) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       25     15     20
  DEL PEAK 40(18P11.23) WILD-TYPE     40     29     55
D71V1, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            25                              40
  CLUS_2                            15                              29
  CLUS_3                            20                              55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       35      7     18
  DEL PEAK 40(18P11.23) WILD-TYPE     41     25     58
D71V2, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            35                              41
  CLUS_2                             7                              25
  CLUS_3                            18                              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(18P11.23) MUTATED       16      1      7      7      4
  DEL PEAK 40(18P11.23) WILD-TYPE     30     10     19     24      7
D71V3, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            16                              30
  CLUS_2                             1                              10
  CLUS_3                             7                              19
  CLUS_4                             7                              24
  CLUS_5                             4                               7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       13     18      4
  DEL PEAK 40(18P11.23) WILD-TYPE     26     56      8
D71V4, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            13                              26
  CLUS_2                            18                              56
  CLUS_3                             4                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       35     20      5
  DEL PEAK 40(18P11.23) WILD-TYPE     49     67      7
D71V5, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            35                              49
  CLUS_2                            20                              67
  CLUS_3                             5                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18P11.23) MUTATED       26     10     17      7
  DEL PEAK 40(18P11.23) WILD-TYPE     36     16     45     26
D71V6, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              36
  CLUS_2                            10                              16
  CLUS_3                            17                              45
  CLUS_4                             7                              26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(18P11.23) MUTATED       26     15     12      5
  DEL PEAK 40(18P11.23) WILD-TYPE     40     51     23      6
D71V7, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              40
  CLUS_2                            15                              51
  CLUS_3                            12                              23
  CLUS_4                             5                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(18P11.23) MUTATED       26      9     23
  DEL PEAK 40(18P11.23) WILD-TYPE     36     13     71
D71V8, multiclass
        clus
vv       DEL PEAK 40(18P11.23) MUTATED DEL PEAK 40(18P11.23) WILD-TYPE
  CLUS_1                            26                              36
  CLUS_2                             9                              13
  CLUS_3                            23                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 41(18Q12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       46     25     40
  DEL PEAK 41(18Q12.2) WILD-TYPE     19     19     35
D72V1, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           46                             19
  CLUS_2                           25                             19
  CLUS_3                           40                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       55     16     40
  DEL PEAK 41(18Q12.2) WILD-TYPE     21     16     36
D72V2, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           55                             21
  CLUS_2                           16                             16
  CLUS_3                           40                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(18Q12.2) MUTATED       31      4     12     19      4
  DEL PEAK 41(18Q12.2) WILD-TYPE     15      7     14     12      7
D72V3, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           31                             15
  CLUS_2                            4                              7
  CLUS_3                           12                             14
  CLUS_4                           19                             12
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       25     37      8
  DEL PEAK 41(18Q12.2) WILD-TYPE     14     37      4
D72V4, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           25                             14
  CLUS_2                           37                             37
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       59     45      7
  DEL PEAK 41(18Q12.2) WILD-TYPE     25     42      5
D72V5, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           59                             25
  CLUS_2                           45                             42
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q12.2) MUTATED       38     23     38     12
  DEL PEAK 41(18Q12.2) WILD-TYPE     24      3     24     21
D72V6, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           38                             24
  CLUS_2                           23                              3
  CLUS_3                           38                             24
  CLUS_4                           12                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(18Q12.2) MUTATED       45     32     26      6
  DEL PEAK 41(18Q12.2) WILD-TYPE     21     34      9      5
D72V7, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           45                             21
  CLUS_2                           32                             34
  CLUS_3                           26                              9
  CLUS_4                            6                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(18Q12.2) MUTATED       39     21     49
  DEL PEAK 41(18Q12.2) WILD-TYPE     23      1     45
D72V8, multiclass
        clus
vv       DEL PEAK 41(18Q12.2) MUTATED DEL PEAK 41(18Q12.2) WILD-TYPE
  CLUS_1                           39                             23
  CLUS_2                           21                              1
  CLUS_3                           49                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 42(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       48     27     44
  DEL PEAK 42(18Q21.2) WILD-TYPE     17     17     31
D73V1, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           48                             17
  CLUS_2                           27                             17
  CLUS_3                           44                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       61     17     41
  DEL PEAK 42(18Q21.2) WILD-TYPE     15     15     35
D73V2, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           61                             15
  CLUS_2                           17                             15
  CLUS_3                           41                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(18Q21.2) MUTATED       34      5     12     20      5
  DEL PEAK 42(18Q21.2) WILD-TYPE     12      6     14     11      6
D73V3, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           34                             12
  CLUS_2                            5                              6
  CLUS_3                           12                             14
  CLUS_4                           20                             11
  CLUS_5                            5                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       28     40      8
  DEL PEAK 42(18Q21.2) WILD-TYPE     11     34      4
D73V4, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           28                             11
  CLUS_2                           40                             34
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       65     47      7
  DEL PEAK 42(18Q21.2) WILD-TYPE     19     40      5
D73V5, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           65                             19
  CLUS_2                           47                             40
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q21.2) MUTATED       43     23     39     14
  DEL PEAK 42(18Q21.2) WILD-TYPE     19      3     23     19
D73V6, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           23                              3
  CLUS_3                           39                             23
  CLUS_4                           14                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q21.2) MUTATED       49     33     26      8
  DEL PEAK 42(18Q21.2) WILD-TYPE     17     33      9      3
D73V7, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           49                             17
  CLUS_2                           33                             33
  CLUS_3                           26                              9
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q21.2) MUTATED       43     21     52
  DEL PEAK 42(18Q21.2) WILD-TYPE     19      1     42
D73V8, multiclass
        clus
vv       DEL PEAK 42(18Q21.2) MUTATED DEL PEAK 42(18Q21.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           21                              1
  CLUS_3                           52                             42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 43(18Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       40     26     46
  DEL PEAK 43(18Q22.3) WILD-TYPE     25     18     29
D74V1, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           40                             25
  CLUS_2                           26                             18
  CLUS_3                           46                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       54     15     43
  DEL PEAK 43(18Q22.3) WILD-TYPE     22     17     33
D74V2, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           54                             22
  CLUS_2                           15                             17
  CLUS_3                           43                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(18Q22.3) MUTATED       31      4     14     20      3
  DEL PEAK 43(18Q22.3) WILD-TYPE     15      7     12     11      8
D74V3, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           31                             15
  CLUS_2                            4                              7
  CLUS_3                           14                             12
  CLUS_4                           20                             11
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       25     40      7
  DEL PEAK 43(18Q22.3) WILD-TYPE     14     34      5
D74V4, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           25                             14
  CLUS_2                           40                             34
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       57     48      7
  DEL PEAK 43(18Q22.3) WILD-TYPE     27     39      5
D74V5, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           57                             27
  CLUS_2                           48                             39
  CLUS_3                            7                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q22.3) MUTATED       35     23     38     16
  DEL PEAK 43(18Q22.3) WILD-TYPE     27      3     24     17
D74V6, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           35                             27
  CLUS_2                           23                              3
  CLUS_3                           38                             24
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(18Q22.3) MUTATED       41     33     26      9
  DEL PEAK 43(18Q22.3) WILD-TYPE     25     33      9      2
D74V7, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           41                             25
  CLUS_2                           33                             33
  CLUS_3                           26                              9
  CLUS_4                            9                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(18Q22.3) MUTATED       35     21     53
  DEL PEAK 43(18Q22.3) WILD-TYPE     27      1     41
D74V8, multiclass
        clus
vv       DEL PEAK 43(18Q22.3) MUTATED DEL PEAK 43(18Q22.3) WILD-TYPE
  CLUS_1                           35                             27
  CLUS_2                           21                              1
  CLUS_3                           53                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 44(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       43     12     38
  DEL PEAK 44(19P13.3) WILD-TYPE     22     32     37
D75V1, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           43                             22
  CLUS_2                           12                             32
  CLUS_3                           38                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       43     13     37
  DEL PEAK 44(19P13.3) WILD-TYPE     33     19     39
D75V2, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           43                             33
  CLUS_2                           13                             19
  CLUS_3                           37                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(19P13.3) MUTATED       22      3     13     13      4
  DEL PEAK 44(19P13.3) WILD-TYPE     24      8     13     18      7
D75V3, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           22                             24
  CLUS_2                            3                              8
  CLUS_3                           13                             13
  CLUS_4                           13                             18
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       18     33      4
  DEL PEAK 44(19P13.3) WILD-TYPE     21     41      8
D75V4, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           18                             21
  CLUS_2                           33                             41
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       47     44      2
  DEL PEAK 44(19P13.3) WILD-TYPE     37     43     10
D75V5, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           47                             37
  CLUS_2                           44                             43
  CLUS_3                            2                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       40      9     26     18
  DEL PEAK 44(19P13.3) WILD-TYPE     22     17     36     15
D75V6, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           40                             22
  CLUS_2                            9                             17
  CLUS_3                           26                             36
  CLUS_4                           18                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19P13.3) MUTATED       39     35     12      5
  DEL PEAK 44(19P13.3) WILD-TYPE     27     31     23      6
D75V7, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           39                             27
  CLUS_2                           35                             31
  CLUS_3                           12                             23
  CLUS_4                            5                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19P13.3) MUTATED       41      7     43
  DEL PEAK 44(19P13.3) WILD-TYPE     21     15     51
D75V8, multiclass
        clus
vv       DEL PEAK 44(19P13.3) MUTATED DEL PEAK 44(19P13.3) WILD-TYPE
  CLUS_1                           41                             21
  CLUS_2                            7                             15
  CLUS_3                           43                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 45(19Q11) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       19      7     22
  DEL PEAK 45(19Q11) WILD-TYPE     46     37     53
D76V1, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         19                           46
  CLUS_2                          7                           37
  CLUS_3                         22                           53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       17      7     24
  DEL PEAK 45(19Q11) WILD-TYPE     59     25     52
D76V2, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         17                           59
  CLUS_2                          7                           25
  CLUS_3                         24                           52
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(19Q11) MUTATED        9      2      9     10      3
  DEL PEAK 45(19Q11) WILD-TYPE     37      9     17     21      8
D76V3, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                          9                           37
  CLUS_2                          2                            9
  CLUS_3                          9                           17
  CLUS_4                         10                           21
  CLUS_5                          3                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED        7     23      3
  DEL PEAK 45(19Q11) WILD-TYPE     32     51      9
D76V4, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                          7                           32
  CLUS_2                         23                           51
  CLUS_3                          3                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       21     25      1
  DEL PEAK 45(19Q11) WILD-TYPE     63     62     11
D76V5, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         21                           63
  CLUS_2                         25                           62
  CLUS_3                          1                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q11) MUTATED       21      1     15     10
  DEL PEAK 45(19Q11) WILD-TYPE     41     25     47     23
D76V6, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         21                           41
  CLUS_2                          1                           25
  CLUS_3                         15                           47
  CLUS_4                         10                           23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(19Q11) MUTATED       17     23      1      4
  DEL PEAK 45(19Q11) WILD-TYPE     49     43     34      7
D76V7, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         17                           49
  CLUS_2                         23                           43
  CLUS_3                          1                           34
  CLUS_4                          4                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(19Q11) MUTATED       20      1     24
  DEL PEAK 45(19Q11) WILD-TYPE     42     21     70
D76V8, multiclass
        clus
vv       DEL PEAK 45(19Q11) MUTATED DEL PEAK 45(19Q11) WILD-TYPE
  CLUS_1                         20                           42
  CLUS_2                          1                           21
  CLUS_3                         24                           70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 46(20P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       18      7      8
  DEL PEAK 46(20P12.1) WILD-TYPE     47     37     67
D77V1, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           18                             47
  CLUS_2                            7                             37
  CLUS_3                            8                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       18      6      9
  DEL PEAK 46(20P12.1) WILD-TYPE     58     26     67
D77V2, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           18                             58
  CLUS_2                            6                             26
  CLUS_3                            9                             67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(20P12.1) MUTATED       12      1      5      3      2
  DEL PEAK 46(20P12.1) WILD-TYPE     34     10     21     28      9
D77V3, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           12                             34
  CLUS_2                            1                             10
  CLUS_3                            5                             21
  CLUS_4                            3                             28
  CLUS_5                            2                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       12     10      1
  DEL PEAK 46(20P12.1) WILD-TYPE     27     64     11
D77V4, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                           10                             64
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       22     11      0
  DEL PEAK 46(20P12.1) WILD-TYPE     62     76     12
D77V5, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           22                             62
  CLUS_2                           11                             76
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P12.1) MUTATED       15      7      5      6
  DEL PEAK 46(20P12.1) WILD-TYPE     47     19     57     27
D77V6, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           15                             47
  CLUS_2                            7                             19
  CLUS_3                            5                             57
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(20P12.1) MUTATED       16     10      4      3
  DEL PEAK 46(20P12.1) WILD-TYPE     50     56     31      8
D77V7, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           16                             50
  CLUS_2                           10                             56
  CLUS_3                            4                             31
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(20P12.1) MUTATED       16      6     11
  DEL PEAK 46(20P12.1) WILD-TYPE     46     16     83
D77V8, multiclass
        clus
vv       DEL PEAK 46(20P12.1) MUTATED DEL PEAK 46(20P12.1) WILD-TYPE
  CLUS_1                           16                             46
  CLUS_2                            6                             16
  CLUS_3                           11                             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 47(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       42     20     45
  DEL PEAK 47(21Q11.2) WILD-TYPE     23     24     30
D78V1, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           42                             23
  CLUS_2                           20                             24
  CLUS_3                           45                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       53     16     38
  DEL PEAK 47(21Q11.2) WILD-TYPE     23     16     38
D78V2, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           53                             23
  CLUS_2                           16                             16
  CLUS_3                           38                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(21Q11.2) MUTATED       32      6     15     17      4
  DEL PEAK 47(21Q11.2) WILD-TYPE     14      5     11     14      7
D78V3, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           32                             14
  CLUS_2                            6                              5
  CLUS_3                           15                             11
  CLUS_4                           17                             14
  CLUS_5                            4                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       25     41      8
  DEL PEAK 47(21Q11.2) WILD-TYPE     14     33      4
D78V4, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           25                             14
  CLUS_2                           41                             33
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       56     47      4
  DEL PEAK 47(21Q11.2) WILD-TYPE     28     40      8
D78V5, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           56                             28
  CLUS_2                           47                             40
  CLUS_3                            4                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q11.2) MUTATED       43     13     32     19
  DEL PEAK 47(21Q11.2) WILD-TYPE     19     13     30     14
D78V6, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           13                             13
  CLUS_3                           32                             30
  CLUS_4                           19                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(21Q11.2) MUTATED       44     32     20      8
  DEL PEAK 47(21Q11.2) WILD-TYPE     22     34     15      3
D78V7, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           44                             22
  CLUS_2                           32                             34
  CLUS_3                           20                             15
  CLUS_4                            8                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(21Q11.2) MUTATED       43     12     49
  DEL PEAK 47(21Q11.2) WILD-TYPE     19     10     45
D78V8, multiclass
        clus
vv       DEL PEAK 47(21Q11.2) MUTATED DEL PEAK 47(21Q11.2) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           12                             10
  CLUS_3                           49                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 48(21Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       42     20     45
  DEL PEAK 48(21Q21.1) WILD-TYPE     23     24     30
D79V1, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           42                             23
  CLUS_2                           20                             24
  CLUS_3                           45                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       54     14     39
  DEL PEAK 48(21Q21.1) WILD-TYPE     22     18     37
D79V2, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           54                             22
  CLUS_2                           14                             18
  CLUS_3                           39                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q21.1) MUTATED       32      6     15     15      3
  DEL PEAK 48(21Q21.1) WILD-TYPE     14      5     11     16      8
D79V3, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           32                             14
  CLUS_2                            6                              5
  CLUS_3                           15                             11
  CLUS_4                           15                             16
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       25     38      8
  DEL PEAK 48(21Q21.1) WILD-TYPE     14     36      4
D79V4, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           25                             14
  CLUS_2                           38                             36
  CLUS_3                            8                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       56     46      5
  DEL PEAK 48(21Q21.1) WILD-TYPE     28     41      7
D79V5, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           56                             28
  CLUS_2                           46                             41
  CLUS_3                            5                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q21.1) MUTATED       43     14     34     16
  DEL PEAK 48(21Q21.1) WILD-TYPE     19     12     28     17
D79V6, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           14                             12
  CLUS_3                           34                             28
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q21.1) MUTATED       44     33     18      9
  DEL PEAK 48(21Q21.1) WILD-TYPE     22     33     17      2
D79V7, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           44                             22
  CLUS_2                           33                             33
  CLUS_3                           18                             17
  CLUS_4                            9                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q21.1) MUTATED       43     13     48
  DEL PEAK 48(21Q21.1) WILD-TYPE     19      9     46
D79V8, multiclass
        clus
vv       DEL PEAK 48(21Q21.1) MUTATED DEL PEAK 48(21Q21.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           13                              9
  CLUS_3                           48                             46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 49(21Q22.12) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       43     20     45
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     24     30
D80V1, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            43                              22
  CLUS_2                            20                              24
  CLUS_3                            45                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       54     14     40
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     18     36
D80V2, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            54                              22
  CLUS_2                            14                              18
  CLUS_3                            40                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.12) MUTATED       32      6     16     15      3
  DEL PEAK 49(21Q22.12) WILD-TYPE     14      5     10     16      8
D80V3, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            32                              14
  CLUS_2                             6                               5
  CLUS_3                            16                              10
  CLUS_4                            15                              16
  CLUS_5                             3                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       25     39      8
  DEL PEAK 49(21Q22.12) WILD-TYPE     14     35      4
D80V4, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            25                              14
  CLUS_2                            39                              35
  CLUS_3                             8                               4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       57     47      4
  DEL PEAK 49(21Q22.12) WILD-TYPE     27     40      8
D80V5, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            57                              27
  CLUS_2                            47                              40
  CLUS_3                             4                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.12) MUTATED       42     15     32     19
  DEL PEAK 49(21Q22.12) WILD-TYPE     20     11     30     14
D80V6, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            42                              20
  CLUS_2                            15                              11
  CLUS_3                            32                              30
  CLUS_4                            19                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.12) MUTATED       44     34     17      9
  DEL PEAK 49(21Q22.12) WILD-TYPE     22     32     18      2
D80V7, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            44                              22
  CLUS_2                            34                              32
  CLUS_3                            17                              18
  CLUS_4                             9                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.12) MUTATED       41     14     49
  DEL PEAK 49(21Q22.12) WILD-TYPE     21      8     45
D80V8, multiclass
        clus
vv       DEL PEAK 49(21Q22.12) MUTATED DEL PEAK 49(21Q22.12) WILD-TYPE
  CLUS_1                            41                              21
  CLUS_2                            14                               8
  CLUS_3                            49                              45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = DEL PEAK 50(22Q11.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       46     13     20
  DEL PEAK 50(22Q11.1) WILD-TYPE     19     31     55
D81V1, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           46                             19
  CLUS_2                           13                             31
  CLUS_3                           20                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       51     10     18
  DEL PEAK 50(22Q11.1) WILD-TYPE     25     22     58
D81V2, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           51                             25
  CLUS_2                           10                             22
  CLUS_3                           18                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       28      1      7      9      5
  DEL PEAK 50(22Q11.1) WILD-TYPE     18     10     19     22      6
D81V3, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           28                             18
  CLUS_2                            1                             10
  CLUS_3                            7                             19
  CLUS_4                            9                             22
  CLUS_5                            5                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       22     22      6
  DEL PEAK 50(22Q11.1) WILD-TYPE     17     52      6
D81V4, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           22                             17
  CLUS_2                           22                             52
  CLUS_3                            6                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       53     25      1
  DEL PEAK 50(22Q11.1) WILD-TYPE     31     62     11
D81V5, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           53                             31
  CLUS_2                           25                             62
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       43     11     16      9
  DEL PEAK 50(22Q11.1) WILD-TYPE     19     15     46     24
D81V6, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           43                             19
  CLUS_2                           11                             15
  CLUS_3                           16                             46
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       48     19      7      3
  DEL PEAK 50(22Q11.1) WILD-TYPE     18     47     28      8
D81V7, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           48                             18
  CLUS_2                           19                             47
  CLUS_3                            7                             28
  CLUS_4                            3                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       44      9     24
  DEL PEAK 50(22Q11.1) WILD-TYPE     18     13     70
D81V8, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           44                             18
  CLUS_2                            9                             13
  CLUS_3                           24                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = DEL PEAK 51(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       25      7     37
  DEL PEAK 51(XP21.1) WILD-TYPE     40     37     38
D82V1, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          25                            40
  CLUS_2                           7                            37
  CLUS_3                          37                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       26      7     36
  DEL PEAK 51(XP21.1) WILD-TYPE     50     25     40
D82V2, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          26                            50
  CLUS_2                           7                            25
  CLUS_3                          36                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(XP21.1) MUTATED       15      0     16     15      4
  DEL PEAK 51(XP21.1) WILD-TYPE     31     11     10     16      7
D82V3, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          15                            31
  CLUS_2                           0                            11
  CLUS_3                          16                            10
  CLUS_4                          15                            16
  CLUS_5                           4                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       13     35      2
  DEL PEAK 51(XP21.1) WILD-TYPE     26     39     10
D82V4, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          13                            26
  CLUS_2                          35                            39
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       27     40      2
  DEL PEAK 51(XP21.1) WILD-TYPE     57     47     10
D82V5, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          27                            57
  CLUS_2                          40                            47
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       23      5     27     14
  DEL PEAK 51(XP21.1) WILD-TYPE     39     21     35     19
D82V6, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          23                            39
  CLUS_2                           5                            21
  CLUS_3                          27                            35
  CLUS_4                          14                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(XP21.1) MUTATED       22     32      9      4
  DEL PEAK 51(XP21.1) WILD-TYPE     44     34     26      7
D82V7, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          22                            44
  CLUS_2                          32                            34
  CLUS_3                           9                            26
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(XP21.1) MUTATED       21      5     41
  DEL PEAK 51(XP21.1) WILD-TYPE     41     17     53
D82V8, multiclass
        clus
vv       DEL PEAK 51(XP21.1) MUTATED DEL PEAK 51(XP21.1) WILD-TYPE
  CLUS_1                          21                            41
  CLUS_2                           5                            17
  CLUS_3                          41                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = DEL PEAK 52(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       24      9     41
  DEL PEAK 52(XP11.3) WILD-TYPE     41     35     34
D83V1, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          24                            41
  CLUS_2                           9                            35
  CLUS_3                          41                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       26     11     37
  DEL PEAK 52(XP11.3) WILD-TYPE     50     21     39
D83V2, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          26                            50
  CLUS_2                          11                            21
  CLUS_3                          37                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP11.3) MUTATED       12      1     15     19      5
  DEL PEAK 52(XP11.3) WILD-TYPE     34     10     11     12      6
D83V3, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          12                            34
  CLUS_2                           1                            10
  CLUS_3                          15                            11
  CLUS_4                          19                            12
  CLUS_5                           5                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       11     40      1
  DEL PEAK 52(XP11.3) WILD-TYPE     28     34     11
D83V4, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          11                            28
  CLUS_2                          40                            34
  CLUS_3                           1                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       26     46      2
  DEL PEAK 52(XP11.3) WILD-TYPE     58     41     10
D83V5, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          26                            58
  CLUS_2                          46                            41
  CLUS_3                           2                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       21      6     29     18
  DEL PEAK 52(XP11.3) WILD-TYPE     41     20     33     15
D83V6, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          21                            41
  CLUS_2                           6                            20
  CLUS_3                          29                            33
  CLUS_4                          18                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP11.3) MUTATED       21     36     11      4
  DEL PEAK 52(XP11.3) WILD-TYPE     45     30     24      7
D83V7, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          21                            45
  CLUS_2                          36                            30
  CLUS_3                          11                            24
  CLUS_4                           4                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP11.3) MUTATED       20      5     47
  DEL PEAK 52(XP11.3) WILD-TYPE     42     17     47
D83V8, multiclass
        clus
vv       DEL PEAK 52(XP11.3) MUTATED DEL PEAK 52(XP11.3) WILD-TYPE
  CLUS_1                          20                            42
  CLUS_2                           5                            17
  CLUS_3                          47                            47
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(84) Variable = DEL PEAK 53(XQ11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       18      8     16
  DEL PEAK 53(XQ11.2) WILD-TYPE     47     36     59
D84V1, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          18                            47
  CLUS_2                           8                            36
  CLUS_3                          16                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       21      4     17
  DEL PEAK 53(XQ11.2) WILD-TYPE     55     28     59
D84V2, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          21                            55
  CLUS_2                           4                            28
  CLUS_3                          17                            59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XQ11.2) MUTATED       11      2      4      6      3
  DEL PEAK 53(XQ11.2) WILD-TYPE     35      9     22     25      8
D84V3, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          11                            35
  CLUS_2                           2                             9
  CLUS_3                           4                            22
  CLUS_4                           6                            25
  CLUS_5                           3                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED        8     14      4
  DEL PEAK 53(XQ11.2) WILD-TYPE     31     60      8
D84V4, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                           8                            31
  CLUS_2                          14                            60
  CLUS_3                           4                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       22     20      0
  DEL PEAK 53(XQ11.2) WILD-TYPE     62     67     12
D84V5, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          22                            62
  CLUS_2                          20                            67
  CLUS_3                           0                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ11.2) MUTATED       17      6      9     10
  DEL PEAK 53(XQ11.2) WILD-TYPE     45     20     53     23
D84V6, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          17                            45
  CLUS_2                           6                            20
  CLUS_3                           9                            53
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XQ11.2) MUTATED       17     17      6      0
  DEL PEAK 53(XQ11.2) WILD-TYPE     49     49     29     11
D84V7, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          17                            49
  CLUS_3                           6                            29
  CLUS_4                           0                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XQ11.2) MUTATED       16      5     19
  DEL PEAK 53(XQ11.2) WILD-TYPE     46     17     75
D84V8, multiclass
        clus
vv       DEL PEAK 53(XQ11.2) MUTATED DEL PEAK 53(XQ11.2) WILD-TYPE
  CLUS_1                          16                            46
  CLUS_2                           5                            17
  CLUS_3                          19                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = DEL PEAK 54(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       19      6     15
  DEL PEAK 54(XQ21.33) WILD-TYPE     46     38     60
D85V1, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           19                             46
  CLUS_2                            6                             38
  CLUS_3                           15                             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       21      4     15
  DEL PEAK 54(XQ21.33) WILD-TYPE     55     28     61
D85V2, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           21                             55
  CLUS_2                            4                             28
  CLUS_3                           15                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XQ21.33) MUTATED       13      1      2      7      3
  DEL PEAK 54(XQ21.33) WILD-TYPE     33     10     24     24      8
D85V3, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           13                             33
  CLUS_2                            1                             10
  CLUS_3                            2                             24
  CLUS_4                            7                             24
  CLUS_5                            3                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       12     13      1
  DEL PEAK 54(XQ21.33) WILD-TYPE     27     61     11
D85V4, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           12                             27
  CLUS_2                           13                             61
  CLUS_3                            1                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       22     18      0
  DEL PEAK 54(XQ21.33) WILD-TYPE     62     69     12
D85V5, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           22                             62
  CLUS_2                           18                             69
  CLUS_3                            0                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XQ21.33) MUTATED       20      3      8      9
  DEL PEAK 54(XQ21.33) WILD-TYPE     42     23     54     24
D85V6, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           20                             42
  CLUS_2                            3                             23
  CLUS_3                            8                             54
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XQ21.33) MUTATED       18     15      3      2
  DEL PEAK 54(XQ21.33) WILD-TYPE     48     51     32      9
D85V7, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           18                             48
  CLUS_2                           15                             51
  CLUS_3                            3                             32
  CLUS_4                            2                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XQ21.33) MUTATED       18      3     17
  DEL PEAK 54(XQ21.33) WILD-TYPE     44     19     77
D85V8, multiclass
        clus
vv       DEL PEAK 54(XQ21.33) MUTATED DEL PEAK 54(XQ21.33) WILD-TYPE
  CLUS_1                           18                             44
  CLUS_2                            3                             19
  CLUS_3                           17                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
