[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
                            Clinical feature             
AGE                         "AGE"                        
AGE_mutation.rate           "AGE_mutation rate"          
NEOPLASM.DISEASESTAGE       "NEOPLASM DISEASESTAGE"      
PATHOLOGY.T.STAGE           "PATHOLOGY T STAGE"          
PATHOLOGY.N.STAGE           "PATHOLOGY N STAGE"          
PATHOLOGY.M.STAGE           "PATHOLOGY M STAGE"          
GENDER                      "GENDER"                     
KARNOFSKY.PERFORMANCE.SCORE "KARNOFSKY PERFORMANCE SCORE"
NUMBERPACKYEARSSMOKED       "NUMBERPACKYEARSSMOKED"      
RACE                        "RACE"                       
ETHNICITY                   "ETHNICITY"                  
                            Statistical test             Significant variables
AGE                         "Spearman correlation test"  "N=2"                
AGE_mutation.rate           "Linear Regression Analysis" "N=1"                
NEOPLASM.DISEASESTAGE       "Kruskal-Wallis test"        "N=2"                
PATHOLOGY.T.STAGE           "Spearman correlation test"  "N=2"                
PATHOLOGY.N.STAGE           "Spearman correlation test"  "N=2"                
PATHOLOGY.M.STAGE           "Kruskal-Wallis test"        "N=0"                
GENDER                      "Wilcoxon test"              "N=0"                
KARNOFSKY.PERFORMANCE.SCORE "Spearman correlation test"  "N=0"                
NUMBERPACKYEARSSMOKED       "Spearman correlation test"  "N=0"                
RACE                        "Kruskal-Wallis test"        "N=0"                
ETHNICITY                   "Wilcoxon test"              "N=1"                
                            Associated with         
AGE                         "older"                 
AGE_mutation.rate           " "                     
NEOPLASM.DISEASESTAGE       " "                     
PATHOLOGY.T.STAGE           "higher stage"          
PATHOLOGY.N.STAGE           "higher stage"          
PATHOLOGY.M.STAGE           " "                     
GENDER                      " "                     
KARNOFSKY.PERFORMANCE.SCORE " "                     
NUMBERPACKYEARSSMOKED       " "                     
RACE                        " "                     
ETHNICITY                   "not hispanic or latino"
                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
AGE                         "N=2"                                                                                     
AGE_mutation.rate           " "                                                                                       
NEOPLASM.DISEASESTAGE       " "                                                                                       
PATHOLOGY.T.STAGE           "N=2"                                                                                     
PATHOLOGY.N.STAGE           "N=2"                                                                                     
PATHOLOGY.M.STAGE           " "                                                                                       
GENDER                      " "                                                                                       
KARNOFSKY.PERFORMANCE.SCORE " "                                                                                       
NUMBERPACKYEARSSMOKED       " "                                                                                       
RACE                        " "                                                                                       
ETHNICITY                   "N=1"                                                                                     
                            Associated with           
AGE                         "younger"            "N=0"
AGE_mutation.rate           " "                  " "  
NEOPLASM.DISEASESTAGE       " "                  " "  
PATHOLOGY.T.STAGE           "lower stage"        "N=0"
PATHOLOGY.N.STAGE           "lower stage"        "N=0"
PATHOLOGY.M.STAGE           " "                  " "  
GENDER                      " "                  " "  
KARNOFSKY.PERFORMANCE.SCORE " "                  " "  
NUMBERPACKYEARSSMOKED       " "                  " "  
RACE                        " "                  " "  
ETHNICITY                   "hispanic or latino" "N=0"
