gene1	gene2	pval	qval
Amp_8q24.13	Del_1p36.32	0.000102	1
Del_1p36.32	Del_6q22.31	0.000102	1
Del_1p36.32	Del_10q26.3	0.00011	1
19q-Del	Amp_8q24.13	0.000119	1
ATRX	PIK3CA	0.000165	1
Del_1p32.3	Del_9p23	0.000168	1
PIK3CA	TP53	0.000179	1
11p-Del	Del_1p32.3	0.000201	1
Del_1p36.32	Del_11p15.5	0.000203	1
10q-Del	1p-Del	0.000206	1
Amp_7p11.2	Del_19q13.41	0.00021	1
19q-Del	Del_11p15.5	0.000239	1
1p-Del	6q-Del	0.000255	1
ATRX	18q-Del	0.000261	1
10p-Del	1p-Del	0.000289	1
IDH1	Del_22q13.31	0.00031	1
Del_1p36.32	Del_11p15.1	0.000315	1
Amp_10p15.3	Del_1p36.32	0.00035	1
19q-Del	Del_22q13.31	0.00036	1
11p-Del	1p-Del	0.000366	1
Del_1p36.32	Del_9p21.3	0.000377	1
CIC	Del_11p15.5	0.000387	1
Del_1p32.3	Del_6q24.3	0.000394	1
22q-Del	Del_19q13.42	0.000416	1
Amp_10p15.3	Del_1p32.3	0.000437	1
9p-Del	Del_1p32.3	0.000449	1
CIC	Del_9p21.3	0.000453	1
1p-Del	Del_9p23	0.000467	1
CIC	Del_6q24.3	0.000493	1
IDH1	7p-Amp	0.000538	1
Del_19q13.41	Del_22q13.31	0.000579	1
Del_1p32.3	Del_9p21.3	0.000609	1
IDH1	19p-Amp	0.000677	1
1p-Del	Amp_10p15.3	0.000752	1
22q-Del	Del_19q13.41	0.000772	1
CIC	10q-Del	0.000796	1
ATRX	PTEN	0.000812	1
PTEN	Del_19q13.42	0.000812	1
Amp_8q24.13	Del_19q13.41	0.00082	1
Del_1p36.32	Del_2q37.3	0.000946	1
1p-Del	9p-Del	0.001	1
CIC	10p-Del	0.00101	1
CIC	Amp_8q24.13	0.00101	1
CIC	Del_6q22.31	0.00101	1
19q-Del	Amp_12p13.32	0.00106	1
Del_1p32.3	Del_6q22.31	0.00109	1
EGFR	Del_19q13.42	0.00118	1
Amp_12p13.32	Del_1p32.3	0.0012	1
Del_1p32.3	Del_2q37.3	0.0012	1
19q-Del	Amp_7p11.2	0.00124	1
PTEN	Del_19q13.41	0.0013	1
8q-Amp	Del_19q13.41	0.0013	1
6q-Del	Del_1p36.32	0.00136	1
1p-Del	22q-Del	0.00154	1
Del_9p21.3	Del_19q13.42	0.00159	1
Amp_8q24.13	Del_19q13.42	0.00164	1
CIC	Amp_7q32.3	0.00167	1
Del_1p36.32	Del_9p23	0.0018	1
NOTCH1	TP53	0.00183	1
11p-Del	Del_1p36.32	0.00194	1
CIC	Del_11p15.1	0.00205	1
CIC	Del_22q13.31	0.00205	1
1p-Del	Amp_12p13.32	0.00212	1
1p-Del	Del_2q37.3	0.00212	1
IDH1	7q-Amp	0.00218	1
Amp_10p15.3	Del_19q13.41	0.00223	1
19q-Del	Del_11p15.1	0.00258	1
IDH1	Amp_19p13.2	0.00279	1
Del_1p32.3	Del_22q13.31	0.0029	1
TP53	Amp_19p13.2	0.00297	1
1p-Del	Amp_7p11.2	0.00328	1
7p-Amp	Del_19q13.42	0.00411	1
FUBP1	Del_10q26.3	0.00414	1
19q-Del	Amp_10p15.3	0.00432	1
CIC	Amp_7q31.2	0.00442	1
CIC	6q-Del	0.00519	1
Del_1p36.32	Del_12q12	0.00539	1
Del_19q13.42	Del_22q13.31	0.00561	1
19q-Del	Del_12q12	0.0058	1
9p-Del	Del_1p36.32	0.00605	1
Amp_12p13.32	Del_1p36.32	0.00608	1
Del_1p32.3	Del_12q12	0.00624	1
CIC	11p-Del	0.00653	1
19q-Del	Del_9p23	0.00657	1
19q-Del	Del_2q37.3	0.00673	1
19q-Del	9p-Del	0.00692	1
7p-Amp	Del_19q13.41	0.00828	1
PTEN	19q-Del	0.00847	1
8q-Amp	19q-Del	0.00847	1
19q-Del	22q-Del	0.00851	1
ATRX	Amp_7p11.2	0.0087	1
8q-Amp	Del_19q13.42	0.0088	1
1p-Del	Del_12q12	0.0089	1
8q-Amp	Del_1p32.3	0.00905	1
19q-Del	6q-Del	0.00919	1
IDH1	Amp_12q14.1	0.00923	1
FUBP1	Amp_7p11.2	0.0093	1
CIC	9p-Del	0.00991	1
6q-Del	Del_1p32.3	0.0101	1
CIC	Amp_10p15.3	0.0103	1
Del_1p36.32	Del_22q13.31	0.0106	1
IDH1	Del_6p25.3	0.0107	1
ATRX	14q-Del	0.0112	1
Amp_7p11.2	Del_1p36.32	0.0117	1
7p-Amp	Del_13q14.2	0.0118	1
Del_9p21.3	Del_19q13.41	0.012	1
IDH1	PTPN11	0.0122	1
19q-Del	Del_5p15.33	0.0123	1
IDH1	Amp_7q31.2	0.0124	1
EGFR	Del_19q13.41	0.0125	1
11p-Del	19q-Del	0.0125	1
PTEN	1p-Del	0.0126	1
8q-Amp	1p-Del	0.0126	1
BRAF	IDH1	0.013	1
Del_1p32.3	Del_5p15.33	0.0131	1
ATRX	Amp_1q32.1	0.0132	1
ATRX	Amp_19p13.2	0.0132	1
Amp_1q32.1	Del_19q13.42	0.0132	1
CIC	7q-Amp	0.0133	1
CIC	Amp_7p11.2	0.0133	1
CIC	Del_9p23	0.0136	1
7q-Amp	13q-Del	0.0136	1
IDH2	TP53	0.0144	1
ATRX	NF1	0.0149	1
10q-Del	Del_1p32.3	0.0154	1
CIC	22q-Del	0.0162	1
EGFR	19q-Del	0.0165	1
10p-Amp	Del_1p36.32	0.017	1
IDH1	Amp_7q32.3	0.0173	1
TP53	Amp_7p11.2	0.0175	1
NOTCH1	Del_10q26.3	0.0176	1
1p-Del	Del_5p15.33	0.0178	1
IDH1	Del_14q24.3	0.018	1
19q-Del	Del_6q22.31	0.0181	1
10p-Amp	Del_1p32.3	0.019	1
ATRX	4q-Del	0.0191	1
10p-Del	Del_1p32.3	0.02	1
FUBP1	Amp_7q32.3	0.0209	1
ZBTB20	Del_9p21.3	0.0237	1
FUBP1	Del_9p21.3	0.0243	1
Amp_10p15.3	Del_19q13.42	0.0243	1
Del_11p15.5	Del_19q13.41	0.0247	1
10p-Amp	1p-Del	0.0251	1
19q-Del	Del_6q24.3	0.0253	1
CIC	EGFR	0.0254	1
NOTCH1	10q-Del	0.0264	1
PTPN11	TP53	0.0271	1
TP53	19p-Amp	0.0271	1
FUBP1	Del_11p15.5	0.0283	1
TP53	15q-Del	0.029	1
TP53	Amp_1q32.1	0.029	1
Amp_12p13.32	Del_19q13.41	0.0295	1
NOTCH1	10p-Del	0.0298	1
ATRX	Del_10q26.3	0.0304	1
CIC	Amp_12p13.32	0.0308	1
CIC	Del_2q37.3	0.0308	1
FUBP1	Del_6q24.3	0.0316	1
10p-Amp	Del_19q13.41	0.0317	1
Del_11p15.5	Del_19q13.42	0.033	1
ATRX	18p-Del	0.0331	1
IDH1	6q-Del	0.0334	1
FUBP1	Amp_7q31.2	0.034	1
ATRX	Del_18q23	0.0359	1
TP53	ZBTB20	0.0359	1
10q-Del	Del_1p36.32	0.0373	1
IDH1	MYH2	0.0375	1
19q-Del	Amp_7q32.3	0.0385	1
FUBP1	7p-Amp	0.0392	1
FUBP1	10q-Del	0.0392	1
CIC	Del_6p25.3	0.0397	1
7p-Amp	19q-Del	0.0409	1
NOTCH1	Del_22q13.31	0.0427	1
IDH1	PLCG1	0.043	1
22q-Del	Del_1p32.3	0.0434	1
Amp_7q32.3	Del_19q13.42	0.0436	1
FUBP1	10p-Del	0.0437	1
FUBP1	Amp_8q24.13	0.0437	1
FUBP1	Del_6q22.31	0.0437	1
ATRX	ZBTB20	0.0445	1
10q-Del	Amp_12p13.32	0.0447	1
1p-Del	Del_6p25.3	0.0455	1
Del_1p32.3	Del_3p21.31	0.0457	1
10p-Del	Del_1p36.32	0.0472	1
19q-Del	Amp_7q31.2	0.0485	1
13q-Del	Amp_7q31.2	0.0486	1
CIC	Del_12q12	0.0495	1
PIK3CA	Amp_8q24.13	0.0496	1
10p-Del	Amp_12p13.32	0.0496	1
7p-Amp	13q-Del	0.0509	1
12q-Del	Del_1p36.32	0.0526	1
Amp_1q32.1	Del_1p36.32	0.0526	1
Del_1p36.32	Del_8q24.3	0.0526	1
1p-Del	Del_14q24.3	0.0528	1
STK19	19q-Del	0.0548	1
12q-Del	19q-Del	0.0548	1
19q-Del	Amp_1q32.1	0.0548	1
8q-Amp	Del_1p36.32	0.0558	1
DYNC1I1	IDH1	0.0559	1
IDH1	PRCP	0.0559	1
STK19	Del_1p32.3	0.0571	1
12q-Del	Del_1p32.3	0.0571	1
Del_1p32.3	Del_3q29	0.0571	1
7q-Amp	Del_13q14.2	0.0587	1
Amp_7p11.2	Del_11p15.5	0.0587	1
FUBP1	7q-Amp	0.0597	1
FUBP1	Del_11p15.1	0.0602	1
FUBP1	Del_22q13.31	0.0602	1
1p-Del	Del_3p21.31	0.0605	1
NOTCH1	Amp_12p13.32	0.0609	1
CIC	PTEN	0.0617	1
CIC	8q-Amp	0.0617	1
NF1	TP53	0.0636	1
CIC	Del_14q24.3	0.0652	1
ATRX	IDH2	0.0667	1
ATRX	Amp_12q14.1	0.0667	1
Amp_12q14.1	Del_19q13.42	0.0667	1
ATRX	19p-Amp	0.0682	1
ATRX	Xq-Del	0.0682	1
19p-Amp	Del_19q13.42	0.0682	1
ZBTB20	Del_9p23	0.0692	1
ZBTB20	Del_10q26.3	0.0692	1
STK19	1p-Del	0.0697	1
12q-Del	1p-Del	0.0697	1
1p-Del	Amp_1q32.1	0.0697	1
1p-Del	Amp_3q26.33	0.0697	1
1p-Del	Del_3q29	0.0697	1
1p-Del	Del_8q24.3	0.0697	1
7p-Amp	1p-Del	0.0699	1
Del_6p25.3	Del_19q13.42	0.0702	1
IDH1	Del_9p23	0.0708	1
10q-Del	Del_11p15.5	0.0719	1
7q-Amp	19q-Del	0.0737	1
MYH2	Del_19q13.41	0.0743	1
Amp_7q31.2	Del_19q13.42	0.0759	1
Amp_12q14.1	Del_1p36.32	0.076	1
Del_1p36.32	Del_5p15.33	0.076	1
Amp_13q34	Del_1p36.32	0.0764	1
Del_1p36.32	Del_3q13.31	0.0764	1
CIC	Del_5p15.33	0.0768	1
19q-Del	Amp_13q34	0.0792	1
19q-Del	Amp_12q14.1	0.0797	1
10p-Del	Del_11p15.5	0.0808	1
13q-Del	Amp_7p11.2	0.0808	1
1p-Del	Amp_7q32.3	0.0809	1
19p-Amp	Del_19q13.41	0.0815	1
Amp_7p11.2	Del_1p32.3	0.0815	1
10p-Del	Amp_10p15.3	0.0818	1
Amp_13q34	Del_1p32.3	0.082	1
Del_1p32.3	Del_3q13.31	0.082	1
ATRX	NOTCH1	0.0822	1
FUBP1	Amp_12p13.32	0.0825	1
FUBP1	Del_2q37.3	0.0825	1
Amp_12q14.1	Del_1p32.3	0.0836	1
IDH1	Del_6q22.31	0.0844	1
IDH2	Del_10q26.3	0.0854	1
Amp_12q14.1	Del_19q13.41	0.088	1
7q-Amp	Del_19q13.42	0.0888	1
7p-Amp	Del_1p36.32	0.0904	1
ATRX	15q-Del	0.0907	1
STK19	Del_19q13.42	0.0907	1
12q-Del	Del_19q13.42	0.0907	1
Del_3q29	Del_19q13.42	0.0907	1
PIK3CA	Amp_12p13.32	0.0913	1
PIK3CA	Del_2q37.3	0.0913	1
FUBP1	6q-Del	0.0916	1
Amp_7q31.2	Del_13q14.2	0.0922	1
CIC	NF1	0.0939	1
IDH1	Amp_3q26.33	0.0946	1
1p-Del	Amp_7q31.2	0.0952	1
Del_6p25.3	Del_19q13.41	0.0955	1
CIC	10p-Amp	0.0956	1
TP53	4p-Del	0.0959	1
10q-Del	Amp_11q24.1	0.097	1
1p-Del	Amp_13q34	0.0977	1
1p-Del	Del_3q13.31	0.0977	1
ATRX	4p-Del	0.0985	1
10p-Amp	Del_19q13.42	0.0985	1
EGFR	1p-Del	0.0992	1
Del_12q12	Del_19q13.42	0.1	1
6q-Del	Amp_12p13.32	0.101	1
FUBP1	11p-Del	0.102	1
ZBTB20	Amp_7p11.2	0.102	1
ARID1A	Del_10q26.3	0.105	1
NF1	Amp_8q24.13	0.105	1
11q-Amp	Del_10q26.3	0.105	1
10p-Del	Amp_11q24.1	0.105	1
1p-Del	Amp_12q14.1	0.105	1
CIC	7p-Amp	0.107	1
10p-Amp	19q-Del	0.107	1
10q-Del	Amp_8q24.13	0.11	1
Del_4q34.3	Del_6q22.31	0.11	1
Del_1p36.32	Del_5q34	0.111	1
NOTCH1	Del_6q24.3	0.112	1
PIK3R1	TP53	0.112	1
STK19	Del_19q13.41	0.112	1
TP53	Amp_19p13.3	0.112	1
12q-Del	Del_19q13.41	0.112	1
14q-Del	Amp_12p13.32	0.112	1
Amp_1q32.1	Del_19q13.41	0.112	1
Del_3q29	Del_19q13.41	0.112	1
Del_1p36.32	Del_6p25.3	0.113	1
13q-Del	Amp_7q32.3	0.114	1
Amp_12p13.32	Del_19q13.42	0.114	1
Del_1p36.32	Del_14q24.3	0.115	1
BRAF	TP53	0.116	1
ATRX	Del_Xq21.1	0.117	1
PLCG1	Del_19q13.42	0.117	1
22q-Del	Del_1p36.32	0.117	1
Del_4q34.3	Del_14q24.3	0.117	1
Del_1p32.3	Del_5q34	0.118	1
19q-Del	Del_6p25.3	0.119	1
8q-Amp	Del_14q24.3	0.121	1
10p-Del	Amp_8q24.13	0.121	1
Amp_19p13.3	Del_14q24.3	0.121	1
NOTCH1	22q-Del	0.122	1
FUBP1	Amp_10p15.3	0.125	1
Amp_7q32.3	Del_1p36.32	0.125	1
TP53	4q-Del	0.126	1
ATRX	22q-Del	0.129	1
NF1	Del_19q13.42	0.129	1
NOTCH1	Amp_7p11.2	0.13	1
7q-Amp	1p-Del	0.131	1
11p-Del	Del_19q13.41	0.131	1
Amp_8q24.13	Del_14q24.3	0.131	1
Amp_11q24.1	Del_22q13.31	0.132	1
Del_12q12	Del_19q13.41	0.132	1
EGFR	Amp_8q24.13	0.134	1
11p-Del	14q-Del	0.134	1
18q-Del	Del_11p15.5	0.134	1
PLCG1	Del_19q13.41	0.135	1
PIK3CA	Amp_10p15.3	0.136	1
SLC6A3	Del_9p21.3	0.137	1
1p-Del	Del_5q34	0.137	1
Amp_4q12	Del_19q13.42	0.14	1
Amp_13q34	Del_19q13.42	0.14	1
ATRX	PIK3R1	0.141	1
ATRX	Amp_19p13.3	0.141	1
Amp_7q32.3	Del_13q14.2	0.141	1
ZBTB20	9p-Del	0.142	1
4q-Del	Del_6q24.3	0.142	1
Del_11p15.5	Del_18q23	0.142	1
IDH2	Del_14q24.3	0.143	1
Amp_7p11.2	Del_11p15.1	0.147	1
Amp_7q32.3	Del_19q13.41	0.147	1
IDH1	PDGFRA	0.148	1
NOTCH1	Amp_8q24.13	0.148	1
NOTCH1	Del_6q22.31	0.148	1
6q-Del	Amp_10p15.3	0.148	1
10q-Del	Del_11p15.1	0.149	1
18p-Del	Del_9p23	0.149	1
IDH1	Del_6q24.3	0.15	1
Amp_7q32.3	Del_1p32.3	0.152	1
EGFR	NOTCH1	0.154	1
FUBP1	22q-Del	0.154	1
Amp_7q31.2	Del_1p36.32	0.156	1
Del_11p15.1	Del_19q13.41	0.157	1
Amp_7p11.2	Del_13q14.2	0.16	1
10q-Del	4q-Del	0.161	1
14q-Del	Amp_10p15.3	0.161	1
Xq-Del	Del_1p36.32	0.161	1
Amp_2p24.3	Del_1p36.32	0.161	1
IDH2	Del_9p21.3	0.163	1
10p-Del	Del_11p15.1	0.163	1
Del_2q37.3	Del_19q13.41	0.163	1
PCDHAC2	Del_22q13.31	0.164	1
NOTCH1	Del_14q24.3	0.165	1
TP53	14q-Del	0.165	1
19p-Amp	19q-Del	0.165	1
19q-Del	Amp_2p24.3	0.165	1
IDH2	9p-Del	0.166	1
Amp_4q12	Del_19q13.41	0.167	1
Amp_13q34	Del_19q13.41	0.167	1
10p-Amp	Del_14q24.3	0.168	1
11q-Amp	Del_14q24.3	0.168	1
4p-Del	Del_14q24.3	0.168	1
19p-Amp	Del_1p32.3	0.169	1
Xq-Del	Del_1p32.3	0.169	1
Amp_2p24.3	Del_1p32.3	0.169	1
10p-Del	4q-Del	0.171	1
12q-Del	Amp_7q32.3	0.171	1
18q-Del	Amp_8q24.13	0.171	1
4q-Del	Del_6q22.31	0.171	1
CREBZF	TP53	0.172	1
Amp_12p13.32	Del_6q24.3	0.172	1
NF1	Del_19q13.41	0.173	1
TP53	Del_10q26.3	0.175	1
PTEN	Del_11p15.5	0.176	1
SMARCA4	Del_11p15.5	0.176	1
ZBTB20	Del_13q14.2	0.176	1
Del_9p23	Del_19q13.42	0.179	1
IDH1	9p-Del	0.182	1
PDGFRA	Del_9p21.3	0.182	1
7p-Amp	Del_18q23	0.182	1
CIC	STK19	0.183	1
CIC	12q-Del	0.183	1
CIC	Amp_1q32.1	0.183	1
CIC	Amp_3q26.33	0.183	1
CIC	Amp_19p13.2	0.183	1
CIC	Del_3q29	0.183	1
CIC	Del_8q24.3	0.183	1
EGFR	Del_1p36.32	0.184	1
PCDHAC2	Del_1p36.32	0.184	1
Amp_7q31.2	Del_1p32.3	0.185	1
8q-Amp	Del_6q24.3	0.186	1
Amp_19p13.3	Del_6q24.3	0.186	1
7q-Amp	Del_18q23	0.187	1
EGFR	FUBP1	0.188	1
FUBP1	PCDHAC2	0.188	1
MYH2	19q-Del	0.19	1
IRS4	1p-Del	0.191	1
19p-Amp	1p-Del	0.191	1
11p-Del	Del_19q13.42	0.191	1
1p-Del	Xq-Del	0.191	1
1p-Del	Amp_2p24.3	0.191	1
11p-Del	Amp_11q24.1	0.192	1
14q-Del	Amp_11q24.1	0.192	1
ARID1A	9p-Del	0.193	1
Del_5p15.33	Del_19q13.42	0.194	1
14q-Del	Del_11p15.5	0.197	1
Amp_11q24.1	Del_14q24.3	0.199	1
10q-Del	Del_2q37.3	0.2	1
ATRX	BRAF	0.201	1
ATRX	TMEM216	0.201	1
BRAF	Del_19q13.42	0.201	1
EGFR	Amp_12p13.32	0.201	1
EGFR	Del_2q37.3	0.201	1
TRERF1	Del_19q13.42	0.201	1
Amp_7q32.3	Del_12q12	0.201	1
IDH2	Del_11p15.5	0.202	1
11q-Amp	Del_9p21.3	0.203	1
12q-Del	Amp_7q31.2	0.203	1
Del_11p15.1	Del_19q13.42	0.204	1
MYH2	Del_19q13.42	0.205	1
18q-Del	Del_11p15.1	0.205	1
PIK3R1	Del_4q34.3	0.206	1
PTEN	Del_4q34.3	0.206	1
SMARCA4	10q-Del	0.206	1
ZBTB20	7p-Amp	0.206	1
ZBTB20	10q-Del	0.206	1
18q-Del	Del_9p23	0.206	1
TP53	FAM47C	0.207	1
7p-Amp	Del_1p32.3	0.207	1
PDGFRA	Del_19q13.42	0.211	1
Amp_1q22	Del_19q13.42	0.211	1
Amp_7p11.2	Amp_12p13.32	0.211	1
IDH2	Del_6q24.3	0.212	1
SLC6A3	Amp_7q32.3	0.214	1
Amp_4q12	Amp_7q32.3	0.214	1
Amp_7q32.3	Del_3q13.31	0.214	1
7p-Amp	Del_11p15.5	0.215	1
NOTCH1	Del_12q12	0.216	1
10p-Del	Del_2q37.3	0.216	1
Amp_12p13.32	Del_6q22.31	0.216	1
IDH1	Del_3q13.31	0.217	1
PIK3R1	Amp_8q24.13	0.217	1
PTEN	Amp_8q24.13	0.217	1
SMARCA4	10p-Del	0.217	1
ZBTB20	10p-Del	0.217	1
8q-Amp	Del_6q22.31	0.217	1
Amp_19p13.3	Del_6q22.31	0.217	1
Amp_7q31.2	Del_19q13.41	0.218	1
CIC	Del_3p21.31	0.22	1
PIK3CA	Del_9p21.3	0.22	1
6q-Del	Del_4q34.3	0.22	1
19q-Del	Del_14q24.3	0.221	1
7q-Amp	Del_1p36.32	0.222	1
BRAF	Del_19q13.41	0.224	1
TRERF1	Del_19q13.41	0.224	1
CIC	Amp_13q34	0.227	1
CIC	Del_3q13.31	0.227	1
FUBP1	Del_6p25.3	0.23	1
TP53	BCOR	0.23	1
EIF1AX	Del_1p36.32	0.232	1
PLCG1	Del_1p36.32	0.232	1
Del_1p36.32	Del_Xq21.1	0.232	1
Del_4q34.3	Del_6q24.3	0.233	1
IDH2	10q-Del	0.234	1
EIF1AX	19q-Del	0.237	1
PLCG1	19q-Del	0.237	1
6q-Del	Amp_8q24.13	0.237	1
Del_1p32.3	Del_14q24.3	0.237	1
PIK3R1	Amp_7q32.3	0.238	1
Del_5p15.33	Del_19q13.41	0.238	1
Amp_7q32.3	Del_14q24.3	0.239	1
HTRA2	IDH1	0.24	1
NOTCH1	PTEN	0.241	1
NOTCH1	8q-Amp	0.241	1
SLC6A3	Del_9p23	0.241	1
SLC6A3	Del_10q26.3	0.241	1
FAM47C	Del_10q26.3	0.241	1
EIF1AX	Del_1p32.3	0.242	1
PLCG1	Del_1p32.3	0.242	1
11q-Amp	Del_6q24.3	0.242	1
7q-Amp	Del_19q13.41	0.242	1
10q-Del	11p-Del	0.242	1
Amp_Xp11.22	Del_1p32.3	0.242	1
Del_1p32.3	Del_Xq21.1	0.242	1
LRRC37A2	Del_9p21.3	0.243	1
STK19	Del_1p36.32	0.243	1
Amp_3q26.33	Del_1p36.32	0.243	1
Del_1p36.32	Del_3q29	0.243	1
PDGFRA	Del_19q13.41	0.244	1
Amp_1q22	Del_19q13.41	0.244	1
IDH2	10p-Del	0.245	1
IDH2	Del_6q22.31	0.245	1
PIK3CA	Del_6p25.3	0.245	1
18q-Del	Amp_12p13.32	0.245	1
4q-Del	Del_2q37.3	0.245	1
Del_11p15.1	Del_18q23	0.248	1
SLC6A3	Amp_7q31.2	0.249	1
PCDHAC2	1p-Del	0.249	1
Amp_7q31.2	Del_3q13.31	0.249	1
NOTCH1	Del_2q37.3	0.25	1
VAV3	Amp_7p11.2	0.25	1
7q-Amp	12q-Del	0.25	1
12q-Del	Amp_7p11.2	0.25	1
19q-Del	Amp_3q26.33	0.25	1
19q-Del	Del_3q29	0.25	1
19q-Del	Del_8q24.3	0.25	1
Amp_7q31.2	Del_12q12	0.251	1
PIK3R1	Del_22q13.31	0.254	1
PTEN	Del_11p15.1	0.254	1
SMARCA4	Del_11p15.1	0.254	1
ZBTB20	Del_22q13.31	0.254	1
Amp_8q24.13	Del_6q24.3	0.254	1
FUBP1	Del_12q12	0.255	1
Del_12q12	Del_18q23	0.255	1
IDH1	Del_18q23	0.256	1
7q-Amp	Del_1p32.3	0.256	1
Amp_1q32.1	Del_1p32.3	0.257	1
Amp_3q26.33	Del_1p32.3	0.257	1
Del_1p32.3	Del_8q24.3	0.257	1
NF1	Amp_11q24.1	0.259	1
10p-Del	11p-Del	0.259	1
14q-Del	Amp_8q24.13	0.259	1
22q-Del	Amp_11q24.1	0.259	1
4q-Del	6q-Del	0.259	1
ATRX	7p-Amp	0.26	1
EGFR	Amp_10p15.3	0.263	1
ARID1A	10q-Del	0.264	1
11q-Amp	10q-Del	0.264	1
10q-Del	4p-Del	0.264	1
11p-Del	Amp_7p11.2	0.264	1
FUBP1	Del_9p23	0.266	1
EIF1AX	1p-Del	0.267	1
PDGFRA	Amp_7q32.3	0.267	1
PLCG1	1p-Del	0.267	1
ROBO3	1p-Del	0.267	1
1p-Del	Amp_Xp11.22	0.267	1
1p-Del	Del_Xq21.1	0.267	1
Amp_7q32.3	Del_5q34	0.267	1
ATRX	Del_14q24.3	0.269	1
IDH1	18q-Del	0.27	1
NOTCH1	Amp_12q14.1	0.27	1
NOTCH1	Del_5p15.33	0.27	1
TP53	18q-Del	0.27	1
NOTCH1	6q-Del	0.272	1
10q-Del	Del_4q34.3	0.273	1
11p-Del	18q-Del	0.275	1
ARID1A	10p-Del	0.276	1
ARID1A	Amp_8q24.13	0.276	1
10p-Amp	10p-Del	0.276	1
10p-Amp	Del_6q22.31	0.276	1
11q-Amp	10p-Del	0.276	1
11q-Amp	Amp_8q24.13	0.276	1
11q-Amp	Del_6q22.31	0.276	1
10p-Del	4p-Del	0.276	1
Amp_19p13.2	Del_14q24.3	0.276	1
FUBP1	9p-Del	0.279	1
SMARCA4	Del_10q26.3	0.28	1
CIC	PDGFRA	0.281	1
CIC	Del_5q34	0.281	1
FUBP1	PTEN	0.282	1
FUBP1	SMARCA4	0.282	1
FUBP1	8q-Amp	0.282	1
Amp_7q31.2	Del_18q23	0.282	1
IDH2	Del_11p15.1	0.283	1
IDH2	Del_22q13.31	0.283	1
7q-Amp	18q-Del	0.284	1
TP53	22q-Del	0.285	1
ATRX	TCF12	0.286	1
Amp_3q26.33	Del_19q13.42	0.286	1
Amp_19p13.2	Del_19q13.42	0.286	1
Del_8q24.3	Del_19q13.42	0.286	1
IDH1	STK19	0.29	1
IDH1	Del_8q24.3	0.29	1
PIK3R1	Amp_7q31.2	0.291	1
10q-Del	Amp_10p15.3	0.291	1
9p-Del	Del_19q13.42	0.291	1
Amp_11q24.1	Del_10q26.3	0.293	1
NOTCH1	14q-Del	0.295	1
10p-Del	Del_4q34.3	0.295	1
NF1	Del_11p15.5	0.296	1
NF1	Del_13q14.2	0.296	1
PDGFRA	Del_9p23	0.296	1
PIK3CA	PTEN	0.296	1
PIK3CA	8q-Amp	0.296	1
PIK3R1	Amp_12p13.32	0.296	1
PTEN	Amp_12p13.32	0.296	1
PTEN	Del_2q37.3	0.296	1
TP53	PLCG1	0.296	1
TP53	9q-Del	0.296	1
ZBTB20	Del_2q37.3	0.296	1
18p-Del	9p-Del	0.296	1
PIK3CA	Del_10q26.3	0.298	1
SLC6A3	7q-Amp	0.298	1
SLC6A3	Amp_7p11.2	0.298	1
FAM47C	Amp_7p11.2	0.298	1
7q-Amp	Amp_4q12	0.298	1
7q-Amp	Del_3q13.31	0.298	1
Amp_4q12	Amp_7p11.2	0.298	1
Amp_7p11.2	Del_3q13.31	0.298	1
Del_1p32.3	Del_6p25.3	0.299	1
EGFR	Amp_11q24.1	0.3	1
PCDHAC2	22q-Del	0.3	1
CIC	Amp_12q14.1	0.302	1
MYH2	Del_13q14.2	0.303	1
BCOR	Del_11p15.5	0.303	1
BCOR	Del_13q14.2	0.303	1
PDGFRA	Amp_7q31.2	0.304	1
14q-Del	Amp_7q32.3	0.304	1
Amp_7q31.2	Del_5q34	0.304	1
PIK3CA	9p-Del	0.306	1
1p-Del	Del_13q14.2	0.308	1
18q-Del	Amp_10p15.3	0.309	1
Del_2q37.3	Del_18q23	0.31	1
FUBP1	Amp_12q14.1	0.311	1
FUBP1	Del_5p15.33	0.311	1
SMARCA4	6q-Del	0.312	1
ZBTB20	13q-Del	0.312	1
8q-Amp	6q-Del	0.312	1
6q-Del	Amp_19p13.3	0.312	1
ATRX	CREBZF	0.314	1
ATRX	PTPN11	0.314	1
PTPN11	Del_19q13.42	0.314	1
IRS4	Del_19q13.42	0.314	1
Amp_2p24.3	Del_19q13.42	0.314	1
ARID1A	Del_11p15.1	0.315	1
BCOR	Del_6q24.3	0.315	1
11q-Amp	Del_22q13.31	0.315	1
14q-Del	Del_11p15.1	0.315	1
7q-Amp	Del_14q24.3	0.316	1
7q-Amp	Del_12q12	0.322	1
Amp_7q32.3	Del_22q13.31	0.323	1
IDH2	Del_9p23	0.324	1
Amp_12q14.1	Del_9p23	0.324	1
SLC6A3	Del_14q24.3	0.325	1
FAM47C	Del_14q24.3	0.325	1
19q-Del	Amp_4q12	0.325	1
19q-Del	Del_3q13.31	0.325	1
IDH2	Amp_12p13.32	0.326	1
IDH2	Del_2q37.3	0.326	1
PIK3CA	Del_5p15.33	0.326	1
Amp_12p13.32	Amp_12q14.1	0.326	1
Del_2q37.3	Del_5p15.33	0.326	1
PIK3R1	11p-Del	0.328	1
PTEN	11p-Del	0.328	1
SMARCA4	11p-Del	0.328	1
SMARCA4	14q-Del	0.328	1
8q-Amp	14q-Del	0.328	1
14q-Del	Amp_19p13.3	0.328	1
Amp_3q26.33	Del_19q13.41	0.33	1
Amp_19p13.2	Del_19q13.41	0.33	1
Del_8q24.3	Del_19q13.41	0.33	1
Amp_4q12	Del_1p32.3	0.332	1
CREBZF	Amp_7q32.3	0.333	1
FUBP1	13q-Del	0.333	1
LRRC37A2	Amp_7q32.3	0.333	1
Xq-Del	Amp_7q32.3	0.333	1
Amp_7q32.3	Del_7p22.3	0.333	1
BRAF	Del_1p36.32	0.335	1
CIC	14q-Del	0.335	1
TRERF1	Del_1p36.32	0.335	1
14q-Del	1p-Del	0.335	1
14q-Del	Del_19q13.42	0.335	1
Del_1p36.32	Del_3p21.31	0.337	1
BRAF	19q-Del	0.34	1
TRERF1	19q-Del	0.34	1
FSTL5	IDH1	0.341	1
IDH1	Xq-Del	0.341	1
IDH2	6q-Del	0.342	1
NOTCH1	7p-Amp	0.342	1
6q-Del	Amp_12q14.1	0.342	1
PIK3R1	Del_9p21.3	0.343	1
Amp_7q31.2	Del_14q24.3	0.343	1
ARID1A	FUBP1	0.344	1
ATRX	OR5D18	0.344	1
ATRX	PRCP	0.344	1
DYNC1I1	Del_19q13.42	0.344	1
FUBP1	10p-Amp	0.344	1
FUBP1	4p-Del	0.344	1
PRCP	Del_19q13.42	0.344	1
TNFRSF9	Del_19q13.42	0.344	1
BRAF	Del_1p32.3	0.346	1
NOTCH1	Amp_10p15.3	0.346	1
TRERF1	Del_1p32.3	0.346	1
NF1	Del_4q34.3	0.347	1
STK19	Del_11p15.5	0.347	1
TCF12	Del_13q14.2	0.347	1
Amp_1q32.1	Del_11p15.5	0.347	1
Amp_19p13.2	Del_11p15.5	0.347	1
Amp_19p13.2	Del_13q14.2	0.347	1
Del_8q24.3	Del_13q14.2	0.347	1
CIC	19p-Amp	0.348	1
CIC	Xq-Del	0.348	1
CIC	Amp_2p24.3	0.348	1
CIC	Del_7p22.3	0.348	1
19q-Del	Del_3p21.31	0.348	1
Amp_7p11.2	Del_6q24.3	0.349	1
PTPN11	Del_19q13.41	0.35	1
IRS4	Del_19q13.41	0.35	1
19q-Del	Del_13q14.2	0.35	1
Amp_2p24.3	Del_19q13.41	0.35	1
BCOR	Del_6q22.31	0.351	1
Amp_17q25.1	Del_6q22.31	0.351	1
PDGFRA	7q-Amp	0.354	1
SLC6A3	9p-Del	0.354	1
FAM47C	9p-Del	0.354	1
7q-Amp	Del_5q34	0.354	1
Amp_7p11.2	Del_5q34	0.354	1
13q-Del	Del_2q37.3	0.355	1
FUBP1	Del_13q14.2	0.356	1
FUBP1	14q-Del	0.357	1
11p-Del	Del_18q23	0.357	1
EGFR	Del_11p15.5	0.358	1
IDH2	11p-Del	0.358	1
IDH2	14q-Del	0.358	1
TCF12	Del_6q24.3	0.358	1
PCDHAC2	Del_11p15.5	0.358	1
14q-Del	Del_5p15.33	0.358	1
Amp_19p13.2	Del_6q24.3	0.358	1
PIK3CA	10p-Amp	0.359	1
11q-Amp	Amp_12p13.32	0.359	1
4p-Del	Del_2q37.3	0.359	1
PIK3R1	Amp_10p15.3	0.363	1
PTEN	Amp_10p15.3	0.363	1
ZBTB20	Amp_10p15.3	0.363	1
CREBZF	Del_10q26.3	0.364	1
LRRC37A2	Del_10q26.3	0.364	1
PIK3R1	7q-Amp	0.364	1
SMARCA4	7q-Amp	0.364	1
SMARCA4	Amp_7p11.2	0.364	1
IRS4	Del_10q26.3	0.364	1
Del_7p22.3	Del_10q26.3	0.364	1
18p-Del	Del_9p21.3	0.366	1
18q-Del	9p-Del	0.367	1
7p-Amp	Del_11p15.1	0.368	1
Del_1p32.3	Del_13q14.2	0.368	1
Del_2q37.3	Del_19q13.42	0.368	1
DYNC1I1	Del_19q13.41	0.369	1
PRCP	Del_19q13.41	0.369	1
TNFRSF9	Del_19q13.41	0.369	1
1p-Del	Amp_4q12	0.371	1
BRAF	1p-Del	0.372	1
CREBZF	Amp_7q31.2	0.372	1
LRRC37A2	Amp_7q31.2	0.372	1
TRERF1	1p-Del	0.372	1
Xq-Del	Amp_7q31.2	0.372	1
Amp_7q31.2	Del_7p22.3	0.372	1
NF1	Del_3p21.31	0.373	1
NF1	Del_12q12	0.373	1
18p-Del	Del_10q26.3	0.373	1
Amp_11q24.1	Del_3p21.31	0.373	1
Amp_11q24.1	Del_12q12	0.373	1
ARID1A	Del_9p23	0.374	1
IDH1	Amp_19p13.3	0.374	1
10p-Amp	6q-Del	0.374	1
11q-Amp	13q-Del	0.374	1
11q-Amp	6q-Del	0.374	1
4p-Del	Del_10q26.3	0.374	1
NOTCH1	Amp_17q25.1	0.377	1
TCF12	Del_9p21.3	0.377	1
Amp_7q31.2	Del_11p15.5	0.377	1
Amp_10p15.3	Del_14q24.3	0.377	1
IDH1	PCDHAC2	0.378	1
IDH1	18p-Del	0.378	1
PIK3CA	14q-Del	0.38	1
14q-Del	Del_2q37.3	0.38	1
PCDHAC2	19q-Del	0.381	1
VAV3	7p-Amp	0.382	1
VAV3	Del_4q34.3	0.382	1
7p-Amp	12q-Del	0.382	1
10q-Del	12q-Del	0.382	1
10q-Del	Del_8q24.3	0.382	1
15q-Del	Del_4q34.3	0.382	1
Amp_1q32.1	Del_4q34.3	0.382	1
Amp_3q26.33	Del_4q34.3	0.382	1
PIK3CA	Del_11p15.5	0.385	1
14q-Del	Amp_7q31.2	0.385	1
Del_2q37.3	Del_13q14.2	0.385	1
PCDHAC2	4q-Del	0.389	1
Amp_7p11.2	Del_18q23	0.389	1
BCOR	Del_11p15.1	0.39	1
BCOR	Del_22q13.31	0.39	1
ARID1A	11p-Del	0.391	1
ATRX	FAM47C	0.391	1
10p-Amp	14q-Del	0.391	1
11q-Amp	11p-Del	0.391	1
11q-Amp	14q-Del	0.391	1
14q-Del	4p-Del	0.391	1
Del_3q13.31	Del_19q13.42	0.391	1
IDH2	Amp_10p15.3	0.393	1
EGFR	Del_1p32.3	0.394	1
PCDHAC2	Del_1p32.3	0.394	1
TCF12	Del_6q22.31	0.395	1
VAV3	Amp_8q24.13	0.395	1
10p-Del	12q-Del	0.395	1
10p-Del	Del_8q24.3	0.395	1
15q-Del	Amp_8q24.13	0.395	1
Amp_1q32.1	Amp_8q24.13	0.395	1
Amp_8q24.13	Amp_19p13.2	0.395	1
Amp_19p13.2	Del_6q22.31	0.395	1
Del_9p23	Del_19q13.41	0.396	1
SLC6A3	Del_11p15.5	0.397	1
FAM47C	Del_13q14.2	0.397	1
NF1	SMARCA4	0.401	1
NF1	8q-Amp	0.401	1
NF1	Amp_19p13.3	0.401	1
PIK3R1	22q-Del	0.401	1
PTEN	Amp_11q24.1	0.401	1
SMARCA4	22q-Del	0.401	1
ZBTB20	22q-Del	0.401	1
ZBTB20	Amp_11q24.1	0.401	1
ATRX	PCDHAC2	0.402	1
11p-Del	6q-Del	0.403	1
NOTCH1	Del_9p21.3	0.404	1
PTEN	Del_1p36.32	0.404	1
SLC6A3	Del_6q24.3	0.408	1
FAM47C	Del_6q24.3	0.408	1
Amp_4q12	Del_6q24.3	0.408	1
PDGFRA	Del_1p36.32	0.409	1
Amp_1q22	Del_1p36.32	0.409	1
IDH2	Amp_7p11.2	0.41	1
Amp_7p11.2	Del_5p15.33	0.41	1
PDGFRA	9p-Del	0.411	1
PCDHAC2	Del_4q34.3	0.411	1
10q-Del	18p-Del	0.411	1
EGFR	Del_12q12	0.415	1
18p-Del	Del_12q12	0.415	1
6q-Del	Del_11p15.5	0.415	1
SPANXE	Amp_7q32.3	0.416	1
ROBO3	Amp_7q32.3	0.416	1
14q-Del	Del_19q13.41	0.416	1
9q-Del	Amp_7q32.3	0.416	1
Amp_7q31.2	Del_22q13.31	0.416	1
Amp_7q32.3	Del_Xq21.1	0.416	1
PDGFRA	19q-Del	0.417	1
19q-Del	Amp_1q22	0.417	1
FUBP1	MYH2	0.419	1
FUBP1	BCOR	0.419	1
Amp_17q25.1	Del_18q23	0.419	1
IDH1	TNFRSF9	0.42	1
NOTCH1	12q-Del	0.42	1
NOTCH1	Amp_1q32.1	0.42	1
NOTCH1	Amp_3q26.33	0.42	1
NOTCH1	Del_3q29	0.42	1
NOTCH1	Del_8q24.3	0.42	1
CREBZF	7q-Amp	0.422	1
CREBZF	Amp_7p11.2	0.422	1
FSTL5	7q-Amp	0.422	1
FSTL5	Amp_7p11.2	0.422	1
FUBP1	Del_4q34.3	0.422	1
LRRC37A2	7q-Amp	0.422	1
LRRC37A2	Amp_7p11.2	0.422	1
IRS4	Amp_7p11.2	0.422	1
7q-Amp	Xq-Del	0.422	1
7q-Amp	Del_7p22.3	0.422	1
7q-Amp	Amp_12p13.32	0.423	1
NF1	Del_11p15.1	0.424	1
PDGFRA	Del_1p32.3	0.424	1
PTEN	Del_1p32.3	0.426	1
NKX2-1	Del_9p21.3	0.429	1
PCDHAC2	Amp_8q24.13	0.429	1
TRERF1	Del_9p21.3	0.429	1
10p-Del	18p-Del	0.429	1
18p-Del	Amp_8q24.13	0.429	1
Del_1q43	Del_9p21.3	0.429	1
CIC	EIF1AX	0.431	1
CIC	DDX5	0.431	1
CIC	GAGE2B	0.431	1
CIC	PLCG1	0.431	1
CIC	Amp_Xp11.22	0.431	1
CIC	Del_Xq21.1	0.431	1
IDH2	22q-Del	0.431	1
IDH2	Amp_11q24.1	0.431	1
NF1	Amp_12q14.1	0.431	1
NF1	Del_5p15.33	0.431	1
Amp_11q24.1	Amp_12q14.1	0.431	1
SLC6A3	7p-Amp	0.432	1
SLC6A3	10q-Del	0.432	1
SLC6A3	Del_4q34.3	0.432	1
FAM47C	7p-Amp	0.432	1
FAM47C	10q-Del	0.432	1
FAM47C	Del_4q34.3	0.432	1
7p-Amp	Amp_4q12	0.432	1
7p-Amp	Del_3q13.31	0.432	1
10q-Del	Amp_4q12	0.432	1
14q-Del	19q-Del	0.432	1
CIC	Del_18q23	0.433	1
MYH2	PIK3CA	0.434	1
MYH2	Amp_12p13.32	0.434	1
MYH2	Del_2q37.3	0.434	1
STK19	Del_11p15.1	0.434	1
STK19	Del_22q13.31	0.434	1
TCF12	Del_22q13.31	0.434	1
BCOR	Amp_12p13.32	0.434	1
BCOR	Del_2q37.3	0.434	1
Amp_1q32.1	Del_11p15.1	0.434	1
Amp_1q32.1	Del_22q13.31	0.434	1
Amp_19p13.2	Del_11p15.1	0.434	1
IDH1	Del_3p21.31	0.436	1
4q-Del	Del_6p25.3	0.436	1
Del_3q13.31	Del_19q13.41	0.437	1
TP53	7q-Amp	0.439	1
Amp_7p11.2	Del_6q22.31	0.44	1
Amp_11q24.1	Del_19q13.42	0.44	1
EGFR	PIK3R1	0.443	1
EGFR	SMARCA4	0.443	1
EGFR	ZBTB20	0.443	1
EGFR	8q-Amp	0.443	1
PTEN	PCDHAC2	0.443	1
SMARCA4	18p-Del	0.443	1
PCDHAC2	8q-Amp	0.443	1
PCDHAC2	Amp_19p13.3	0.443	1
8q-Amp	18p-Del	0.443	1
SLC6A3	10p-Del	0.444	1
SLC6A3	Amp_8q24.13	0.444	1
SLC6A3	Del_6q22.31	0.444	1
FAM47C	10p-Del	0.444	1
FAM47C	Amp_8q24.13	0.444	1
FAM47C	Del_6q22.31	0.444	1
10p-Del	Amp_4q12	0.444	1
Amp_4q12	Del_6q22.31	0.444	1
EIF1AX	Del_10q26.3	0.446	1
HTRA2	Del_10q26.3	0.446	1
DDX5	Del_10q26.3	0.446	1
GAGE2B	Del_10q26.3	0.446	1
ROBO3	Del_10q26.3	0.446	1
9q-Del	Del_10q26.3	0.446	1
FSTL5	Del_14q24.3	0.449	1
FUBP1	Del_14q24.3	0.449	1
LRRC37A2	Del_14q24.3	0.449	1
MYH2	13q-Del	0.449	1
PIK3R1	9p-Del	0.449	1
PTPN11	Del_14q24.3	0.449	1
BCOR	13q-Del	0.449	1
BCOR	6q-Del	0.449	1
19p-Amp	Del_14q24.3	0.449	1
8q-Amp	9p-Del	0.449	1
ATRX	BCOR	0.45	1
ATRX	Amp_17q25.1	0.45	1
Amp_7q32.3	Del_11p15.5	0.45	1
Amp_17q25.1	Del_19q13.42	0.45	1
7p-Amp	Amp_12p13.32	0.451	1
Del_5p15.33	Del_14q24.3	0.451	1
ATRX	PLCG1	0.453	1
ATRX	9q-Del	0.453	1
7p-Amp	Del_6q24.3	0.453	1
Del_19q13.42	Del_Xq21.1	0.453	1
SPANXE	Amp_7q31.2	0.454	1
ROBO3	Amp_7q31.2	0.454	1
9q-Del	Amp_7q31.2	0.454	1
Amp_7q31.2	Del_Xq21.1	0.454	1
Amp_11q24.1	Del_1p36.32	0.455	1
FAM47C	Del_9p21.3	0.456	1
Amp_13q34	Del_9p21.3	0.456	1
19q-Del	Amp_17q25.1	0.459	1
6q-Del	Amp_7p11.2	0.459	1
Amp_7q32.3	Del_3p21.31	0.46	1
ARID1A	7q-Amp	0.461	1
ARID1A	Amp_7p11.2	0.461	1
11q-Amp	Amp_7p11.2	0.461	1
FUBP1	STK19	0.462	1
FUBP1	VAV3	0.462	1
FUBP1	12q-Del	0.462	1
FUBP1	15q-Del	0.462	1
FUBP1	Amp_1q32.1	0.462	1
FUBP1	Amp_3q26.33	0.462	1
FUBP1	Amp_19p13.2	0.462	1
FUBP1	Del_3q29	0.462	1
FUBP1	Del_8q24.3	0.462	1
STK19	Del_18q23	0.462	1
12q-Del	Del_18q23	0.462	1
18q-Del	Del_12q12	0.462	1
Amp_1q32.1	Del_18q23	0.462	1
Amp_3q26.33	Del_18q23	0.462	1
Del_3q29	Del_18q23	0.462	1
ARID1A	22q-Del	0.463	1
NF1	11q-Amp	0.463	1
NF1	4p-Del	0.463	1
PDGFRA	1p-Del	0.463	1
11q-Amp	22q-Del	0.463	1
1p-Del	Amp_1q22	0.463	1
PDGFRA	Del_6q24.3	0.465	1
BCOR	11p-Del	0.465	1
4q-Del	Del_10q26.3	0.465	1
FUBP1	Amp_11q24.1	0.467	1
CIC	MYH2	0.468	1
CIC	Amp_17q25.1	0.468	1
NF1	19q-Del	0.468	1
NOTCH1	PCDHAC2	0.468	1
19q-Del	Amp_11q24.1	0.468	1
ARID1A	Del_9p21.3	0.469	1
MYH2	Del_1p32.3	0.469	1
NF1	Amp_7q32.3	0.469	1
NOTCH1	Amp_13q34	0.469	1
NOTCH1	Del_3q13.31	0.469	1
EGFR	IDH2	0.472	1
IDH2	PCDHAC2	0.472	1
PCDHAC2	Amp_12q14.1	0.472	1
PIK3CA	STK19	0.476	1
PIK3CA	VAV3	0.476	1
PIK3CA	Amp_1q32.1	0.476	1
PIK3CA	Amp_3q26.33	0.476	1
PIK3CA	Amp_19p13.2	0.476	1
PIK3CA	Del_3q29	0.476	1
PIK3CA	Del_8q24.3	0.476	1
STK19	Amp_12p13.32	0.476	1
STK19	Del_2q37.3	0.476	1
TCF12	Amp_12p13.32	0.476	1
VAV3	Amp_12p13.32	0.476	1
15q-Del	Amp_12p13.32	0.476	1
Amp_1q32.1	Amp_12p13.32	0.476	1
Amp_1q32.1	Del_2q37.3	0.476	1
Amp_12p13.32	Amp_19p13.2	0.476	1
Amp_19p13.2	Del_2q37.3	0.476	1
7p-Amp	Del_14q24.3	0.478	1
18q-Del	Del_9p21.3	0.478	1
FSTL5	TP53	0.48	1
LRRC37A2	TP53	0.48	1
18q-Del	Amp_7q31.2	0.48	1
4q-Del	Amp_7q31.2	0.48	1
7p-Amp	6q-Del	0.481	1
7q-Amp	18p-Del	0.481	1
SLC6A3	Del_11p15.1	0.482	1
SLC6A3	Del_22q13.31	0.482	1
FAM47C	Del_22q13.31	0.482	1
7p-Amp	18q-Del	0.482	1
10q-Del	18q-Del	0.482	1
18q-Del	Del_4q34.3	0.482	1
Amp_11q24.1	Del_1p32.3	0.482	1
Del_4q34.3	Del_6p25.3	0.482	1
DYNC1I1	Del_1p36.32	0.483	1
PIK3CA	Del_14q24.3	0.483	1
PRCP	Del_1p36.32	0.483	1
TNFRSF9	Del_1p36.32	0.483	1
Amp_12p13.32	Del_14q24.3	0.483	1
Del_2q37.3	Del_14q24.3	0.483	1
TP53	ZNF709	0.484	1
PDGFRA	7p-Amp	0.487	1
7p-Amp	Del_5q34	0.487	1
10q-Del	Amp_1q22	0.487	1
10q-Del	Del_5q34	0.487	1
DYNC1I1	19q-Del	0.488	1
EGFR	Del_11p15.1	0.488	1
PRCP	19q-Del	0.488	1
TNFRSF9	19q-Del	0.488	1
PCDHAC2	Del_11p15.1	0.488	1
18p-Del	Del_11p15.1	0.488	1
NF1	PIK3CA	0.489	1
NF1	Amp_12p13.32	0.489	1
NF1	Del_2q37.3	0.489	1
PIK3R1	4q-Del	0.489	1
PTEN	4q-Del	0.489	1
8q-Amp	18q-Del	0.489	1
Amp_11q24.1	Amp_12p13.32	0.489	1
Del_19q13.41	Del_Xq21.1	0.489	1
HSPB8	TP53	0.49	1
BCOR	Del_9p23	0.49	1
BCOR	Del_10q26.3	0.49	1
TCF12	13q-Del	0.491	1
TCF12	6q-Del	0.491	1
13q-Del	Amp_1q32.1	0.491	1
13q-Del	Amp_19p13.2	0.491	1
13q-Del	Del_8q24.3	0.491	1
6q-Del	Amp_19p13.2	0.491	1
DYNC1I1	Del_1p32.3	0.493	1
PRCP	Del_1p32.3	0.493	1
TNFRSF9	Del_1p32.3	0.493	1
NOTCH1	Del_18q23	0.494	1
ATRX	Del_22q13.31	0.495	1
9p-Del	Amp_12q14.1	0.495	1
7q-Amp	14q-Del	0.496	1
MYH2	Amp_10p15.3	0.498	1
BCOR	Amp_10p15.3	0.498	1
PDGFRA	Amp_8q24.13	0.499	1
PDGFRA	Del_6q22.31	0.499	1
10p-Del	Amp_1q22	0.499	1
10p-Del	Del_5q34	0.499	1
10p-Del	18q-Del	0.5	1
ARID1A	Del_14q24.3	0.501	1
EIF1AX	Amp_7p11.2	0.502	1
SPANXE	7q-Amp	0.502	1
SPANXE	Amp_7p11.2	0.502	1
DDX5	Amp_7p11.2	0.502	1
GAGE2B	Amp_7p11.2	0.502	1
ROBO3	7q-Amp	0.502	1
ROBO3	Amp_7p11.2	0.502	1
7q-Amp	9q-Del	0.502	1
7q-Amp	Del_Xq21.1	0.502	1
9q-Del	Amp_7p11.2	0.502	1
Amp_7p11.2	Amp_Xp11.22	0.502	1
Amp_7p11.2	Del_Xq21.1	0.502	1
EGFR	10p-Amp	0.503	1
EGFR	11q-Amp	0.503	1
PCDHAC2	11q-Amp	0.503	1
Amp_17q25.1	Del_19q13.41	0.503	1
13q-Del	Amp_8q24.13	0.504	1
STK19	11p-Del	0.507	1
STK19	14q-Del	0.507	1
VAV3	11p-Del	0.507	1
11p-Del	15q-Del	0.507	1
11p-Del	Amp_1q32.1	0.507	1
11p-Del	Amp_19p13.2	0.507	1
14q-Del	Amp_19p13.2	0.507	1
FUBP1	FAM47C	0.509	1
FUBP1	Amp_4q12	0.509	1
FUBP1	Amp_13q34	0.509	1
FUBP1	Del_3q13.31	0.509	1
SLC6A3	Del_18q23	0.509	1
FAM47C	Del_18q23	0.509	1
Amp_12p13.32	Del_10q26.3	0.51	1
7p-Amp	11p-Del	0.511	1
14q-Del	Del_4q34.3	0.511	1
NF1	13q-Del	0.512	1
SMARCA4	Del_13q14.2	0.512	1
ZBTB20	Del_11p15.5	0.512	1
13q-Del	Amp_11q24.1	0.512	1
Amp_19p13.3	Del_11p15.5	0.512	1
NOTCH1	Del_11p15.5	0.513	1
NOTCH1	Del_13q14.2	0.513	1
PTEN	Del_12q12	0.513	1
SMARCA4	Del_12q12	0.513	1
ZBTB20	Del_3p21.31	0.513	1
ZBTB20	Del_12q12	0.513	1
Amp_19p13.3	Del_12q12	0.513	1
VAV3	Amp_7q32.3	0.514	1
SMARCA4	Amp_7q32.3	0.515	1
ZBTB20	Amp_7q32.3	0.515	1
7q-Amp	Del_11p15.5	0.516	1
IDH2	Del_6p25.3	0.517	1
MYH2	1p-Del	0.517	1
18q-Del	Del_5p15.33	0.517	1
ATRX	PDGFRA	0.518	1
CREBZF	Del_11p15.5	0.518	1
DYNC1I1	1p-Del	0.518	1
FSTL5	Del_11p15.5	0.518	1
LRRC37A2	Del_11p15.5	0.518	1
PRCP	1p-Del	0.518	1
PTPN11	Del_11p15.5	0.518	1
TNFRSF9	1p-Del	0.518	1
IRS4	Del_13q14.2	0.518	1
19p-Amp	Del_11p15.5	0.518	1
19p-Amp	Del_13q14.2	0.518	1
Xq-Del	Del_13q14.2	0.518	1
Amp_11q24.1	Del_19q13.41	0.518	1
Del_5q34	Del_19q13.42	0.518	1
Del_7p22.3	Del_13q14.2	0.518	1
BRAF	Amp_7q32.3	0.519	1
PTPN11	Del_1p36.32	0.519	1
ZNF709	Amp_7q32.3	0.519	1
IRS4	Del_1p36.32	0.519	1
TRERF1	Amp_7q32.3	0.519	1
19p-Amp	Del_1p36.32	0.519	1
Del_1p36.32	Del_7p22.3	0.519	1
Del_18q23	Del_22q13.31	0.519	1
7p-Amp	Del_3p21.31	0.521	1
7p-Amp	Del_12q12	0.521	1
10q-Del	Del_3p21.31	0.521	1
10q-Del	Del_12q12	0.521	1
NOTCH1	PDGFRA	0.523	1
NOTCH1	Amp_1q22	0.523	1
NOTCH1	Del_5q34	0.523	1
PIK3CA	FAM47C	0.523	1
PIK3CA	Del_3q13.31	0.523	1
SLC6A3	Amp_12p13.32	0.523	1
FAM47C	Amp_12p13.32	0.523	1
FAM47C	Del_2q37.3	0.523	1
13q-Del	Del_19q13.41	0.523	1
Amp_4q12	Del_2q37.3	0.523	1
TP53	7p-Amp	0.524	1
IDH1	Amp_13q34	0.526	1
PTPN11	19q-Del	0.526	1
IRS4	19q-Del	0.526	1
19q-Del	Xq-Del	0.526	1
EIF1AX	Del_14q24.3	0.528	1
HTRA2	Del_14q24.3	0.528	1
SMARCA4	Del_6q24.3	0.528	1
ZBTB20	Del_6q24.3	0.528	1
DDX5	Del_14q24.3	0.528	1
GAGE2B	Del_14q24.3	0.528	1
Amp_Xp11.22	Del_14q24.3	0.528	1
Del_14q24.3	Del_Xq21.1	0.528	1
FSTL5	Del_6q24.3	0.529	1
LRRC37A2	Del_6q24.3	0.529	1
PIK3CA	Amp_7q31.2	0.529	1
PTPN11	Del_6q24.3	0.529	1
19p-Amp	Del_6q24.3	0.529	1
Amp_7q31.2	Amp_12p13.32	0.529	1
Amp_7q31.2	Del_3p21.31	0.53	1
BRAF	CIC	0.532	1
CIC	TRERF1	0.532	1
CIC	Del_1q43	0.532	1
IRS4	Del_1p32.3	0.533	1
7p-Amp	Del_6q22.31	0.533	1
Del_1p32.3	Del_7p22.3	0.533	1
MYH2	Amp_11q24.1	0.534	1
NF1	BCOR	0.534	1
BCOR	22q-Del	0.534	1
BCOR	Amp_11q24.1	0.534	1
22q-Del	Amp_17q25.1	0.534	1
CIC	VAV3	0.535	1
NF1	11p-Del	0.536	1
PDGFRA	Del_22q13.31	0.536	1
9p-Del	Del_19q13.41	0.536	1
Amp_1q22	Del_22q13.31	0.536	1
ATRX	SMARCA4	0.537	1
SMARCA4	Del_19q13.42	0.537	1
NOTCH1	18q-Del	0.538	1
NOTCH1	Del_6p25.3	0.538	1
SLC6A3	6q-Del	0.538	1
FAM47C	13q-Del	0.538	1
FAM47C	6q-Del	0.538	1
13q-Del	Amp_13q34	0.538	1
6q-Del	Amp_4q12	0.538	1
PIK3R1	PTEN	0.539	1
PIK3R1	SMARCA4	0.539	1
PIK3R1	ZBTB20	0.539	1
PIK3R1	8q-Amp	0.539	1
PTEN	SMARCA4	0.539	1
PTEN	ZBTB20	0.539	1
PTEN	8q-Amp	0.539	1
SMARCA4	ZBTB20	0.539	1
SMARCA4	8q-Amp	0.539	1
STK19	Amp_10p15.3	0.539	1
TCF12	Amp_10p15.3	0.539	1
VAV3	Amp_10p15.3	0.539	1
ZBTB20	8q-Amp	0.539	1
8q-Amp	Amp_19p13.3	0.539	1
10p-Del	Del_3p21.31	0.539	1
10p-Del	Del_12q12	0.539	1
15q-Del	Amp_10p15.3	0.539	1
Amp_1q32.1	Amp_10p15.3	0.539	1
Amp_8q24.13	Del_3p21.31	0.539	1
Amp_10p15.3	Amp_19p13.2	0.539	1
IDH2	Del_3p21.31	0.541	1
IDH2	Del_12q12	0.541	1
VAV3	Del_1p36.32	0.541	1
7q-Amp	Del_22q13.31	0.541	1
CIC	SMARCA4	0.542	1
11q-Amp	9p-Del	0.543	1
4p-Del	9p-Del	0.543	1
NKX2-1	Del_9p23	0.546	1
TMEM216	Del_9p23	0.546	1
TMEM216	Del_10q26.3	0.546	1
ZNF709	Del_10q26.3	0.546	1
TRERF1	Del_10q26.3	0.546	1
Del_1q43	Del_9p23	0.546	1
PIK3CA	Del_11p15.1	0.547	1
PIK3CA	Del_22q13.31	0.547	1
10p-Amp	18q-Del	0.547	1
4p-Del	Del_6p25.3	0.547	1
CREBZF	7p-Amp	0.55	1
CREBZF	10q-Del	0.55	1
FSTL5	7p-Amp	0.55	1
FSTL5	10q-Del	0.55	1
LRRC37A2	7p-Amp	0.55	1
LRRC37A2	10q-Del	0.55	1
LRRC37A2	Del_4q34.3	0.55	1
PTPN11	Del_4q34.3	0.55	1
VAV3	19q-Del	0.55	1
IRS4	7p-Amp	0.55	1
IRS4	10q-Del	0.55	1
IRS4	Del_4q34.3	0.55	1
7p-Amp	Xq-Del	0.55	1
10q-Del	Amp_2p24.3	0.55	1
10q-Del	Del_7p22.3	0.55	1
19q-Del	Amp_19p13.2	0.55	1
Amp_2p24.3	Del_4q34.3	0.55	1
Del_4q34.3	Del_7p22.3	0.55	1
NF1	Amp_7q31.2	0.551	1
18p-Del	Amp_12p13.32	0.551	1
18p-Del	Del_2q37.3	0.551	1
NF1	1p-Del	0.552	1
SLC6A3	11p-Del	0.552	1
SLC6A3	14q-Del	0.552	1
FAM47C	14q-Del	0.552	1
14q-Del	Del_3q13.31	0.552	1
1p-Del	Amp_11q24.1	0.552	1
BRAF	Amp_7q31.2	0.553	1
NKX2-1	Amp_7q31.2	0.553	1
ZNF709	Amp_7q31.2	0.553	1
TRERF1	Amp_7q31.2	0.553	1
Amp_7q31.2	Del_1q43	0.553	1
SPANXE	9p-Del	0.554	1
GAGE2B	9p-Del	0.554	1
9p-Del	Amp_Xp11.22	0.554	1
IDH2	Del_13q14.2	0.555	1
Amp_12q14.1	Del_13q14.2	0.555	1
TCF12	Del_9p23	0.556	1
TCF12	Del_10q26.3	0.556	1
TP53	Amp_7q31.2	0.557	1
IDH1	TMEM216	0.559	1
VAV3	Del_1p32.3	0.559	1
Amp_8q24.13	Del_6q22.31	0.559	1
Amp_19p13.2	Del_1p32.3	0.559	1
CREBZF	10p-Del	0.561	1
CREBZF	Amp_8q24.13	0.561	1
FSTL5	10p-Del	0.561	1
FSTL5	Amp_8q24.13	0.561	1
FSTL5	Del_6q22.31	0.561	1
FUBP1	PDGFRA	0.561	1
FUBP1	Del_5q34	0.561	1
LRRC37A2	10p-Del	0.561	1
LRRC37A2	Del_6q22.31	0.561	1
PIK3R1	7p-Amp	0.561	1
PIK3R1	10q-Del	0.561	1
PTPN11	Amp_8q24.13	0.561	1
PTPN11	Del_6q22.31	0.561	1
SMARCA4	7p-Amp	0.561	1
ZBTB20	Del_4q34.3	0.561	1
IRS4	10p-Del	0.561	1
IRS4	Amp_8q24.13	0.561	1
19p-Amp	Amp_8q24.13	0.561	1
19p-Amp	Del_6q22.31	0.561	1
8q-Amp	10q-Del	0.561	1
10p-Del	Amp_2p24.3	0.561	1
10p-Del	Del_7p22.3	0.561	1
Xq-Del	Amp_8q24.13	0.561	1
Amp_19p13.3	Del_4q34.3	0.561	1
Del_5q34	Del_18q23	0.561	1
13q-Del	19q-Del	0.562	1
Del_5q34	Del_19q13.41	0.562	1
NOTCH1	Del_9p23	0.563	1
IDH2	PIK3R1	0.566	1
IDH2	PTEN	0.566	1
IDH2	SMARCA4	0.566	1
PIK3R1	Amp_12q14.1	0.566	1
PIK3R1	Del_5p15.33	0.566	1
PTEN	Amp_12q14.1	0.566	1
SMARCA4	Amp_12q14.1	0.566	1
SMARCA4	Del_5p15.33	0.566	1
ZBTB20	Del_5p15.33	0.566	1
TCF12	Amp_7q31.2	0.567	1
VAV3	Amp_7q31.2	0.567	1
PIK3R1	Del_9p23	0.569	1
8q-Amp	Del_9p23	0.569	1
ARID1A	Del_12q12	0.57	1
F13A1	Del_9p21.3	0.57	1
PTPN11	1p-Del	0.57	1
TNFRSF9	Del_9p21.3	0.57	1
11q-Amp	Del_3p21.31	0.57	1
11q-Amp	Del_12q12	0.57	1
1p-Del	Del_7p22.3	0.57	1
EGFR	BCOR	0.571	1
FUBP1	Del_18q23	0.571	1
MYH2	PCDHAC2	0.571	1
MYH2	18p-Del	0.571	1
BCOR	PCDHAC2	0.571	1
BCOR	18p-Del	0.571	1
PCDHAC2	Amp_17q25.1	0.571	1
7q-Amp	4q-Del	0.571	1
18p-Del	Amp_17q25.1	0.571	1
18q-Del	Amp_7p11.2	0.571	1
4q-Del	Amp_7p11.2	0.571	1
Amp_12q14.1	Del_6q24.3	0.571	1
ATRX	Del_6p25.3	0.572	1
IDH1	PIK3CA	0.572	1
IDH2	Amp_7q32.3	0.572	1
EGFR	13q-Del	0.573	1
NF1	STK19	0.573	1
NF1	TCF12	0.573	1
NF1	12q-Del	0.573	1
NF1	15q-Del	0.573	1
NF1	Amp_19p13.2	0.573	1
NF1	Del_3q29	0.573	1
STK19	22q-Del	0.573	1
STK19	Amp_11q24.1	0.573	1
TCF12	22q-Del	0.573	1
VAV3	Amp_11q24.1	0.573	1
12q-Del	Amp_11q24.1	0.573	1
22q-Del	Amp_1q32.1	0.573	1
Amp_1q32.1	Amp_11q24.1	0.573	1
Amp_11q24.1	Amp_19p13.2	0.573	1
Amp_11q24.1	Del_8q24.3	0.573	1
NOTCH1	Del_3p21.31	0.575	1
PDGFRA	Amp_12p13.32	0.575	1
PDGFRA	Del_2q37.3	0.575	1
PIK3CA	Amp_1q22	0.575	1
PIK3CA	Del_5q34	0.575	1
6q-Del	Del_11p15.1	0.575	1
PIK3R1	10p-Del	0.578	1
SMARCA4	Del_6q22.31	0.578	1
ZBTB20	Amp_8q24.13	0.578	1
ZBTB20	Del_6q22.31	0.578	1
8q-Amp	10p-Del	0.578	1
Amp_8q24.13	Amp_19p13.3	0.578	1
SMARCA4	Amp_7q31.2	0.582	1
ZBTB20	Amp_7q31.2	0.582	1
Amp_11q24.1	Del_11p15.5	0.582	1
Amp_11q24.1	Del_13q14.2	0.582	1
SLC6A3	Amp_10p15.3	0.583	1
FAM47C	Amp_10p15.3	0.583	1
LRRC37A2	NOTCH1	0.584	1
NF1	Amp_10p15.3	0.584	1
NOTCH1	PTPN11	0.584	1
NOTCH1	19p-Amp	0.584	1
NOTCH1	Xq-Del	0.584	1
ATRX	HSPB8	0.587	1
PRNP	Del_19q13.42	0.587	1
UBE2G2	Del_19q13.42	0.587	1
FAM47C	Amp_7q32.3	0.587	1
PDGFRA	6q-Del	0.588	1
6q-Del	Del_5q34	0.588	1
14q-Del	Del_9p23	0.59	1
Del_11p15.5	Del_14q24.3	0.59	1
EIF1AX	Del_11p15.5	0.591	1
HTRA2	Del_13q14.2	0.591	1
DDX5	Del_13q14.2	0.591	1
PLCG1	Del_11p15.5	0.591	1
ROBO3	Del_11p15.5	0.591	1
ROBO3	Del_13q14.2	0.591	1
9q-Del	Del_13q14.2	0.591	1
Del_13q14.2	Del_Xq21.1	0.591	1
IDH2	Del_5p15.33	0.592	1
Amp_12q14.1	Del_5p15.33	0.592	1
ARID1A	PTEN	0.594	1
ARID1A	8q-Amp	0.594	1
ARID1A	Amp_19p13.3	0.594	1
PIK3R1	10p-Amp	0.594	1
PIK3R1	4p-Del	0.594	1
PTEN	10p-Amp	0.594	1
PTEN	11q-Amp	0.594	1
PTEN	4p-Del	0.594	1
ZBTB20	10p-Amp	0.594	1
ZBTB20	11q-Amp	0.594	1
11q-Amp	8q-Amp	0.594	1
CREBZF	Del_11p15.1	0.595	1
CREBZF	Del_22q13.31	0.595	1
EGFR	11p-Del	0.595	1
FSTL5	Del_11p15.1	0.595	1
FSTL5	Del_22q13.31	0.595	1
LRRC37A2	Del_11p15.1	0.595	1
LRRC37A2	Del_22q13.31	0.595	1
PTPN11	Del_11p15.1	0.595	1
PCDHAC2	11p-Del	0.595	1
19p-Amp	Del_11p15.1	0.595	1
11p-Del	18p-Del	0.595	1
Amp_2p24.3	Del_22q13.31	0.595	1
Del_6q24.3	Del_11p15.5	0.595	1
CIC	PCDHAC2	0.596	1
CIC	18p-Del	0.596	1
4q-Del	Del_18q23	0.596	1
Amp_7q32.3	Del_6q22.31	0.596	1
BRAF	7q-Amp	0.597	1
BRAF	Amp_7p11.2	0.597	1
NKX2-1	7q-Amp	0.597	1
ZNF709	7q-Amp	0.597	1
ZNF709	Amp_7p11.2	0.597	1
TRERF1	7q-Amp	0.597	1
TRERF1	Amp_7p11.2	0.597	1
7q-Amp	Del_1q43	0.597	1
Amp_10p15.3	Del_6q22.31	0.597	1
Amp_7q32.3	Del_18q23	0.6	1
ARID1A	Del_11p15.5	0.601	1
EIF1AX	Del_6q24.3	0.601	1
SMARCA4	Del_19q13.41	0.601	1
DDX5	Del_6q24.3	0.601	1
GAGE2B	Del_6q24.3	0.601	1
11q-Amp	Del_13q14.2	0.601	1
PCDHAC2	Del_19q13.42	0.602	1
Amp_11q24.1	Del_6q24.3	0.602	1
IDH2	7p-Amp	0.603	1
7p-Amp	Del_5p15.33	0.603	1
10q-Del	Del_5p15.33	0.603	1
14q-Del	Del_1p36.32	0.603	1
VAV3	1p-Del	0.604	1
1p-Del	Amp_19p13.2	0.604	1
IDH1	15q-Del	0.605	1
IDH1	Del_3q29	0.605	1
ATRX	13q-Del	0.606	1
13q-Del	Del_19q13.42	0.606	1
6q-Del	Del_19q13.42	0.606	1
Amp_7q32.3	Amp_10p15.3	0.606	1
CIC	Amp_4q12	0.607	1
PRNP	Del_19q13.41	0.608	1
UBE2G2	Del_19q13.41	0.608	1
11p-Del	Amp_7q31.2	0.608	1
EGFR	TCF12	0.609	1
EGFR	VAV3	0.609	1
EGFR	12q-Del	0.609	1
EGFR	Amp_3q26.33	0.609	1
EGFR	Del_3q29	0.609	1
EGFR	Del_8q24.3	0.609	1
STK19	PCDHAC2	0.609	1
STK19	18p-Del	0.609	1
TCF12	PCDHAC2	0.609	1
TCF12	18p-Del	0.609	1
PCDHAC2	12q-Del	0.609	1
PCDHAC2	Amp_19p13.2	0.609	1
PCDHAC2	Del_3q29	0.609	1
12q-Del	18p-Del	0.609	1
18p-Del	Amp_1q32.1	0.609	1
18p-Del	Amp_3q26.33	0.609	1
18p-Del	Del_3q29	0.609	1
Amp_17q25.1	Del_14q24.3	0.609	1
MYH2	18q-Del	0.611	1
BCOR	18q-Del	0.611	1
BCOR	Del_6p25.3	0.611	1
7q-Amp	Del_4q34.3	0.611	1
18q-Del	Amp_17q25.1	0.611	1
4q-Del	Amp_17q25.1	0.611	1
Amp_7p11.2	Del_4q34.3	0.611	1
NF1	SLC6A3	0.615	1
NF1	FAM47C	0.615	1
NF1	Amp_4q12	0.615	1
NF1	Amp_13q34	0.615	1
SLC6A3	22q-Del	0.615	1
SLC6A3	Amp_11q24.1	0.615	1
TCF12	TP53	0.615	1
FAM47C	22q-Del	0.615	1
FAM47C	Amp_11q24.1	0.615	1
11p-Del	9p-Del	0.615	1
14q-Del	9p-Del	0.615	1
Amp_4q12	Amp_11q24.1	0.615	1
Amp_11q24.1	Del_3q13.31	0.615	1
ARID1A	Del_6q24.3	0.616	1
BCOR	Del_9p21.3	0.616	1
10p-Amp	Del_6q24.3	0.616	1
18q-Del	Del_2q37.3	0.616	1
4p-Del	Del_6q24.3	0.616	1
Amp_12p13.32	Del_6p25.3	0.616	1
Del_4q34.3	Del_22q13.31	0.616	1
7q-Amp	Del_3p21.31	0.617	1
Amp_7p11.2	Del_3p21.31	0.617	1
Amp_7p11.2	Del_12q12	0.617	1
4q-Del	Del_14q24.3	0.618	1
ARID1A	IDH2	0.619	1
ARID1A	Amp_12q14.1	0.619	1
FSTL5	Del_18q23	0.619	1
FUBP1	PTPN11	0.619	1
FUBP1	19p-Amp	0.619	1
FUBP1	Xq-Del	0.619	1
FUBP1	Amp_2p24.3	0.619	1
IDH2	10p-Amp	0.619	1
IDH2	11q-Amp	0.619	1
IDH2	Amp_8q24.13	0.619	1
PTPN11	Del_18q23	0.619	1
10p-Amp	Del_5p15.33	0.619	1
11q-Amp	Amp_12q14.1	0.619	1
11q-Amp	Del_5p15.33	0.619	1
19p-Amp	Del_18q23	0.619	1
10p-Del	Del_5p15.33	0.619	1
4p-Del	Amp_12q14.1	0.619	1
Xq-Del	Del_18q23	0.619	1
Amp_8q24.13	Amp_12q14.1	0.619	1
Amp_12q14.1	Del_6q22.31	0.619	1
Del_7p22.3	Del_18q23	0.619	1
BRAF	Del_14q24.3	0.62	1
EIF1AX	7p-Amp	0.62	1
EIF1AX	10q-Del	0.62	1
EIF1AX	Del_4q34.3	0.62	1
HTRA2	10q-Del	0.62	1
NKX2-1	Del_14q24.3	0.62	1
OR5T3	7p-Amp	0.62	1
OR5T3	Del_4q34.3	0.62	1
SPANXE	7p-Amp	0.62	1
SPANXE	10q-Del	0.62	1
TMEM216	Del_14q24.3	0.62	1
ZNF709	Del_14q24.3	0.62	1
DDX5	7p-Amp	0.62	1
DDX5	10q-Del	0.62	1
GAGE2B	7p-Amp	0.62	1
GAGE2B	10q-Del	0.62	1
GAGE2B	Del_4q34.3	0.62	1
PLCG1	Del_4q34.3	0.62	1
ROBO3	7p-Amp	0.62	1
ROBO3	10q-Del	0.62	1
ROBO3	Del_4q34.3	0.62	1
7p-Amp	9q-Del	0.62	1
7p-Amp	Amp_Xp11.22	0.62	1
7p-Amp	Del_Xq21.1	0.62	1
10q-Del	9q-Del	0.62	1
10q-Del	Amp_Xp11.22	0.62	1
10q-Del	Del_Xq21.1	0.62	1
Amp_7q31.2	Del_11p15.1	0.62	1
ATRX	7q-Amp	0.623	1
Del_5p15.33	Del_10q26.3	0.623	1
13q-Del	Del_18q23	0.624	1
PCDHAC2	Del_10q26.3	0.626	1
FAM47C	Del_9p23	0.627	1
Amp_13q34	Del_9p23	0.627	1
ATRX	ZNF709	0.63	1
ATRX	Del_1q43	0.63	1
EIF1AX	10p-Del	0.63	1
EIF1AX	Del_6q22.31	0.63	1
FUBP1	Del_3p21.31	0.63	1
HTRA2	10p-Del	0.63	1
NKX2-1	Del_19q13.42	0.63	1
OR5T3	Amp_8q24.13	0.63	1
PDGFRA	Amp_10p15.3	0.63	1
PIK3R1	Del_11p15.1	0.63	1
SMARCA4	Del_22q13.31	0.63	1
SPANXE	10p-Del	0.63	1
TMEM216	Del_19q13.42	0.63	1
ZBTB20	Del_11p15.1	0.63	1
ZNF709	Del_19q13.42	0.63	1
DDX5	10p-Del	0.63	1
DDX5	Del_6q22.31	0.63	1
GAGE2B	10p-Del	0.63	1
GAGE2B	Del_6q22.31	0.63	1
PLCG1	Amp_8q24.13	0.63	1
ROBO3	10p-Del	0.63	1
ROBO3	Amp_8q24.13	0.63	1
10p-Del	9q-Del	0.63	1
10p-Del	Amp_Xp11.22	0.63	1
10p-Del	Del_Xq21.1	0.63	1
Amp_1q22	Amp_10p15.3	0.63	1
Amp_8q24.13	Del_Xq21.1	0.63	1
Amp_19p13.3	Del_11p15.1	0.63	1
Amp_19p13.3	Del_22q13.31	0.63	1
CREBZF	Amp_12p13.32	0.631	1
CREBZF	Del_2q37.3	0.631	1
FSTL5	PIK3CA	0.631	1
FSTL5	Amp_12p13.32	0.631	1
FSTL5	Del_2q37.3	0.631	1
LRRC37A2	PIK3CA	0.631	1
PIK3CA	PTPN11	0.631	1
PIK3CA	IRS4	0.631	1
PIK3CA	19p-Amp	0.631	1
PIK3CA	Xq-Del	0.631	1
PIK3CA	Amp_2p24.3	0.631	1
PIK3CA	Del_7p22.3	0.631	1
PTPN11	Amp_12p13.32	0.631	1
PTPN11	Del_2q37.3	0.631	1
IRS4	Del_2q37.3	0.631	1
19p-Amp	Amp_12p13.32	0.631	1
19p-Amp	Del_2q37.3	0.631	1
Xq-Del	Amp_12p13.32	0.631	1
Amp_12p13.32	Del_7p22.3	0.631	1
ARID1A	Amp_7q32.3	0.632	1
MYH2	Del_3p21.31	0.632	1
BCOR	Del_3p21.31	0.632	1
BCOR	Del_12q12	0.632	1
10p-Amp	Amp_7q32.3	0.632	1
Amp_17q25.1	Del_3p21.31	0.632	1
TCF12	7q-Amp	0.633	1
TCF12	Amp_7p11.2	0.633	1
VAV3	7q-Amp	0.633	1
Amp_7p11.2	Del_3q29	0.633	1
PIK3CA	Del_13q14.2	0.634	1
IDH2	Amp_7q31.2	0.636	1
13q-Del	Del_6p25.3	0.636	1
FAM47C	Amp_7q31.2	0.637	1
Amp_4q12	Amp_7q31.2	0.637	1
Del_1p36.32	Del_13q14.2	0.637	1
PDGFRA	TP53	0.638	1
Amp_4q12	Del_1p36.32	0.638	1
PIK3CA	Amp_7q32.3	0.64	1
PCDHAC2	Amp_10p15.3	0.64	1
Amp_7q32.3	Amp_12p13.32	0.64	1
NOTCH1	9p-Del	0.641	1
18p-Del	Amp_7q31.2	0.641	1
CREBZF	13q-Del	0.643	1
FSTL5	6q-Del	0.643	1
LRRC37A2	13q-Del	0.643	1
LRRC37A2	6q-Del	0.643	1
NKX2-1	9p-Del	0.643	1
PTPN11	6q-Del	0.643	1
ZNF709	9p-Del	0.643	1
19p-Amp	13q-Del	0.643	1
19p-Amp	6q-Del	0.643	1
7q-Amp	Del_6q22.31	0.643	1
13q-Del	Xq-Del	0.643	1
13q-Del	Del_7p22.3	0.643	1
9p-Del	Del_1q43	0.643	1
Del_4q34.3	Del_10q26.3	0.643	1
FSTL5	Del_9p21.3	0.644	1
SMARCA4	Del_1p36.32	0.644	1
HTRA2	Del_1p36.32	0.645	1
OR5T3	Del_1p36.32	0.645	1
ROBO3	Del_1p36.32	0.645	1
Amp_Xp11.22	Del_1p36.32	0.645	1
ARID1A	7p-Amp	0.646	1
F13A1	Amp_7q32.3	0.646	1
OR5D18	Amp_7q32.3	0.646	1
PIK3CA	7q-Amp	0.646	1
PIK3CA	Amp_7p11.2	0.646	1
PRCP	Amp_7q32.3	0.646	1
STK19	18q-Del	0.646	1
STK19	4q-Del	0.646	1
STK19	Del_6p25.3	0.646	1
TCF12	18q-Del	0.646	1
TCF12	Del_6p25.3	0.646	1
VAV3	4q-Del	0.646	1
10p-Amp	10q-Del	0.646	1
11q-Amp	7p-Amp	0.646	1
11q-Amp	Del_4q34.3	0.646	1
12q-Del	18q-Del	0.646	1
15q-Del	4q-Del	0.646	1
18q-Del	Amp_1q32.1	0.646	1
18q-Del	Amp_3q26.33	0.646	1
18q-Del	Del_3q29	0.646	1
4q-Del	Amp_1q32.1	0.646	1
4q-Del	Amp_3q26.33	0.646	1
4q-Del	Amp_19p13.2	0.646	1
4q-Del	Del_8q24.3	0.646	1
Amp_7p11.2	Del_2q37.3	0.646	1
Amp_19p13.2	Del_6p25.3	0.646	1
MYH2	9p-Del	0.647	1
BCOR	9p-Del	0.647	1
9p-Del	Amp_17q25.1	0.647	1
EGFR	SLC6A3	0.648	1
EGFR	FAM47C	0.648	1
EGFR	Amp_4q12	0.648	1
EGFR	Del_3q13.31	0.648	1
SLC6A3	18p-Del	0.648	1
PCDHAC2	FAM47C	0.648	1
PCDHAC2	Amp_4q12	0.648	1
PCDHAC2	Amp_13q34	0.648	1
FAM47C	18p-Del	0.648	1
18p-Del	Del_3q13.31	0.648	1
Del_4q34.3	Del_19q13.41	0.648	1
PIK3CA	13q-Del	0.649	1
PIK3CA	6q-Del	0.649	1
PIK3CA	Del_12q12	0.649	1
EIF1AX	NOTCH1	0.65	1
HTRA2	NOTCH1	0.65	1
NOTCH1	SPANXE	0.65	1
NOTCH1	PLCG1	0.65	1
NOTCH1	Del_Xq21.1	0.65	1
OR5T3	19q-Del	0.651	1
ROBO3	19q-Del	0.651	1
19q-Del	Amp_Xp11.22	0.651	1
19q-Del	Del_Xq21.1	0.651	1
IDH2	NOTCH1	0.652	1
NF1	7q-Amp	0.652	1
Amp_7p11.2	Amp_11q24.1	0.652	1
Del_13q14.2	Del_19q13.42	0.653	1
MYH2	PIK3R1	0.654	1
MYH2	ZBTB20	0.654	1
NF1	Del_1p36.32	0.654	1
PIK3R1	Amp_17q25.1	0.654	1
PTEN	BCOR	0.654	1
PTEN	Amp_17q25.1	0.654	1
SMARCA4	BCOR	0.654	1
SMARCA4	19q-Del	0.654	1
SMARCA4	Amp_17q25.1	0.654	1
ZBTB20	Amp_17q25.1	0.654	1
18p-Del	Del_11p15.5	0.654	1
Amp_17q25.1	Amp_19p13.3	0.654	1
13q-Del	1p-Del	0.655	1
CREBZF	11p-Del	0.656	1
FSTL5	11p-Del	0.656	1
FSTL5	14q-Del	0.656	1
LRRC37A2	11p-Del	0.656	1
LRRC37A2	14q-Del	0.656	1
PIK3CA	Del_6q24.3	0.656	1
PTPN11	11p-Del	0.656	1
PTPN11	14q-Del	0.656	1
19p-Amp	11p-Del	0.656	1
19p-Amp	14q-Del	0.656	1
14q-Del	Amp_2p24.3	0.656	1
14q-Del	Del_7p22.3	0.656	1
CIC	DYNC1I1	0.657	1
CIC	PRCP	0.657	1
CIC	TNFRSF9	0.657	1
HTRA2	Del_1p32.3	0.657	1
OR5T3	Del_1p32.3	0.657	1
ROBO3	Del_1p32.3	0.657	1
TP53	18p-Del	0.658	1
NF1	PDGFRA	0.66	1
NF1	Del_5q34	0.66	1
PDGFRA	22q-Del	0.66	1
PDGFRA	Amp_11q24.1	0.66	1
22q-Del	Amp_1q22	0.66	1
Amp_1q22	Amp_11q24.1	0.66	1
Amp_11q24.1	Del_5q34	0.66	1
Del_3p21.31	Del_19q13.42	0.66	1
ARID1A	Del_6q22.31	0.661	1
EIF1AX	Del_11p15.1	0.661	1
NKX2-1	Del_19q13.41	0.661	1
OR5T3	Del_22q13.31	0.661	1
SPANXE	Del_22q13.31	0.661	1
TMEM216	Del_19q13.41	0.661	1
ZNF709	Del_19q13.41	0.661	1
DDX5	Del_11p15.1	0.661	1
GAGE2B	Del_11p15.1	0.661	1
PLCG1	Del_11p15.1	0.661	1
ROBO3	Del_11p15.1	0.661	1
ROBO3	Del_22q13.31	0.661	1
4p-Del	Del_6q22.31	0.661	1
Amp_8q24.13	Amp_11q24.1	0.661	1
Amp_11q24.1	Del_6q22.31	0.661	1
ATRX	FSTL5	0.662	1
ATRX	LRRC37A2	0.662	1
ATRX	Del_7p22.3	0.662	1
Amp_7q32.3	Del_6q24.3	0.662	1
Del_12q12	Del_14q24.3	0.662	1
IDH1	OR5T3	0.665	1
IDH1	GAGE2B	0.665	1
IDH1	9q-Del	0.665	1
IDH1	Del_Xq21.1	0.665	1
PIK3R1	Amp_7p11.2	0.665	1
SMARCA4	Del_1p32.3	0.665	1
ZBTB20	7q-Amp	0.665	1
8q-Amp	Del_18q23	0.665	1
STK19	Del_12q12	0.666	1
TCF12	Del_3p21.31	0.666	1
TCF12	Del_12q12	0.666	1
18q-Del	Amp_7q32.3	0.666	1
4q-Del	Amp_7q32.3	0.666	1
Amp_1q32.1	Del_3p21.31	0.666	1
Amp_1q32.1	Del_12q12	0.666	1
Amp_7q32.3	Del_6p25.3	0.666	1
Amp_19p13.2	Del_12q12	0.666	1
Del_8q24.3	Del_12q12	0.666	1
STK19	Del_14q24.3	0.667	1
TCF12	Del_14q24.3	0.667	1
12q-Del	Del_14q24.3	0.667	1
Amp_12q14.1	Del_9p21.3	0.667	1
Del_3q29	Del_14q24.3	0.667	1
F13A1	Del_9p23	0.669	1
F13A1	Del_10q26.3	0.669	1
OR5D18	Del_9p23	0.669	1
OR5D18	Del_10q26.3	0.669	1
TNFRSF9	Del_9p23	0.669	1
TNFRSF9	Del_10q26.3	0.669	1
TP53	Del_6p25.3	0.671	1
10q-Del	Del_18q23	0.672	1
Del_4q34.3	Del_18q23	0.672	1
HTRA2	TP53	0.673	1
IDH1	BCOR	0.673	1
IDH1	Amp_17q25.1	0.673	1
SPANXE	TP53	0.673	1
TP53	DDX5	0.673	1
TP53	GAGE2B	0.673	1
BRAF	Del_11p15.5	0.675	1
BRAF	Del_13q14.2	0.675	1
F13A1	Amp_7q31.2	0.675	1
NKX2-1	Del_11p15.5	0.675	1
NKX2-1	Del_13q14.2	0.675	1
OR5D18	Amp_7q31.2	0.675	1
PIK3CA	11p-Del	0.675	1
PRCP	Amp_7q31.2	0.675	1
TMEM216	Del_11p15.5	0.675	1
TNFRSF9	Amp_7q31.2	0.675	1
ZNF709	Del_13q14.2	0.675	1
TRERF1	Del_11p15.5	0.675	1
TRERF1	Del_13q14.2	0.675	1
Del_1q43	Del_11p15.5	0.675	1
Del_1q43	Del_13q14.2	0.675	1
IDH2	Amp_17q25.1	0.676	1
MYH2	Amp_12q14.1	0.676	1
Amp_17q25.1	Del_5p15.33	0.676	1
Del_6q22.31	Del_11p15.5	0.676	1
Amp_8q24.13	Del_10q26.3	0.677	1
IDH1	Del_4q34.3	0.679	1
10p-Amp	Del_9p23	0.679	1
11q-Amp	Del_9p23	0.679	1
6q-Del	Amp_7q32.3	0.68	1
CREBZF	Amp_10p15.3	0.681	1
FSTL5	Amp_10p15.3	0.681	1
LRRC37A2	Amp_10p15.3	0.681	1
PTPN11	Amp_10p15.3	0.681	1
19p-Amp	Amp_10p15.3	0.681	1
7q-Amp	6q-Del	0.681	1
Amp_2p24.3	Amp_10p15.3	0.681	1
EIF1AX	FUBP1	0.682	1
EIF1AX	Del_18q23	0.682	1
FUBP1	HTRA2	0.682	1
FUBP1	SPANXE	0.682	1
FUBP1	DDX5	0.682	1
FUBP1	PLCG1	0.682	1
FUBP1	Amp_Xp11.22	0.682	1
FUBP1	Del_Xq21.1	0.682	1
HTRA2	Del_18q23	0.682	1
OR5T3	Del_18q23	0.682	1
DDX5	Del_18q23	0.682	1
GAGE2B	Del_18q23	0.682	1
PLCG1	Del_18q23	0.682	1
Amp_Xp11.22	Del_18q23	0.682	1
BRAF	Del_6q24.3	0.683	1
CIC	Amp_1q22	0.683	1
NKX2-1	Del_6q24.3	0.683	1
PIK3CA	SMARCA4	0.683	1
PIK3R1	Del_2q37.3	0.683	1
SLC6A3	18q-Del	0.683	1
SLC6A3	4q-Del	0.683	1
SLC6A3	Del_6p25.3	0.683	1
TMEM216	Del_6q24.3	0.683	1
ZBTB20	Amp_12p13.32	0.683	1
ZNF709	Del_6q24.3	0.683	1
FAM47C	18q-Del	0.683	1
FAM47C	4q-Del	0.683	1
FAM47C	Del_6p25.3	0.683	1
TRERF1	Del_6q24.3	0.683	1
18q-Del	Amp_4q12	0.683	1
4q-Del	Amp_13q34	0.683	1
Amp_4q12	Del_6p25.3	0.683	1
Amp_12p13.32	Amp_19p13.3	0.683	1
Amp_19p13.3	Del_2q37.3	0.683	1
TP53	Del_22q13.31	0.684	1
EGFR	NF1	0.686	1
PIK3R1	STK19	0.686	1
PIK3R1	TCF12	0.686	1
PIK3R1	Amp_1q32.1	0.686	1
PIK3R1	Amp_19p13.2	0.686	1
PIK3R1	Del_3q29	0.686	1
PIK3R1	Del_8q24.3	0.686	1
PTEN	VAV3	0.686	1
PTEN	12q-Del	0.686	1
PTEN	Del_3q29	0.686	1
PTEN	Del_8q24.3	0.686	1
SMARCA4	STK19	0.686	1
SMARCA4	VAV3	0.686	1
SMARCA4	12q-Del	0.686	1
SMARCA4	15q-Del	0.686	1
SMARCA4	Amp_1q32.1	0.686	1
SMARCA4	Amp_3q26.33	0.686	1
SMARCA4	Amp_19p13.2	0.686	1
SMARCA4	Del_3q29	0.686	1
SMARCA4	Del_8q24.3	0.686	1
STK19	ZBTB20	0.686	1
TCF12	ZBTB20	0.686	1
TCF12	8q-Amp	0.686	1
TCF12	Amp_19p13.3	0.686	1
VAV3	ZBTB20	0.686	1
VAV3	8q-Amp	0.686	1
VAV3	Amp_19p13.3	0.686	1
ZBTB20	12q-Del	0.686	1
ZBTB20	15q-Del	0.686	1
ZBTB20	Amp_1q32.1	0.686	1
ZBTB20	Amp_3q26.33	0.686	1
ZBTB20	Amp_19p13.2	0.686	1
ZBTB20	Del_3q29	0.686	1
8q-Amp	15q-Del	0.686	1
8q-Amp	Amp_1q32.1	0.686	1
8q-Amp	Amp_19p13.2	0.686	1
12q-Del	Amp_19p13.3	0.686	1
Amp_19p13.3	Del_3q29	0.686	1
Amp_19p13.3	Del_8q24.3	0.686	1
ATRX	SLC6A3	0.687	1
ATRX	Amp_4q12	0.687	1
ATRX	Del_3q13.31	0.687	1
SLC6A3	Del_19q13.42	0.687	1
14q-Del	Del_3p21.31	0.687	1
HTRA2	1p-Del	0.688	1
OR5T3	1p-Del	0.688	1
6q-Del	Del_19q13.41	0.688	1
Amp_7q31.2	Amp_10p15.3	0.688	1
NOTCH1	Del_11p15.1	0.689	1
ARID1A	Amp_7q31.2	0.69	1
EGFR	PDGFRA	0.69	1
EGFR	Amp_1q22	0.69	1
EGFR	Del_5q34	0.69	1
PDGFRA	PCDHAC2	0.69	1
PDGFRA	18p-Del	0.69	1
10p-Amp	Amp_7q31.2	0.69	1
18p-Del	Amp_1q22	0.69	1
18p-Del	Del_5q34	0.69	1
ARID1A	NOTCH1	0.691	1
NOTCH1	10p-Amp	0.691	1
NOTCH1	11q-Amp	0.691	1
NOTCH1	4p-Del	0.691	1
Del_4q34.3	Del_19q13.42	0.691	1
EIF1AX	PIK3CA	0.692	1
HTRA2	PIK3CA	0.692	1
HTRA2	Amp_12p13.32	0.692	1
OR5T3	Amp_12p13.32	0.692	1
OR5T3	Del_2q37.3	0.692	1
PIK3CA	SPANXE	0.692	1
PIK3CA	DDX5	0.692	1
PIK3CA	PLCG1	0.692	1
PIK3CA	ROBO3	0.692	1
PIK3CA	Amp_Xp11.22	0.692	1
PIK3CA	Del_Xq21.1	0.692	1
SPANXE	Del_2q37.3	0.692	1
DDX5	Del_2q37.3	0.692	1
GAGE2B	Amp_12p13.32	0.692	1
GAGE2B	Del_2q37.3	0.692	1
PLCG1	Amp_12p13.32	0.692	1
ROBO3	Amp_12p13.32	0.692	1
ROBO3	Del_2q37.3	0.692	1
9q-Del	Amp_12p13.32	0.692	1
Amp_12p13.32	Amp_Xp11.22	0.692	1
Amp_12p13.32	Del_Xq21.1	0.692	1
Amp_Xp11.22	Del_2q37.3	0.692	1
TP53	Del_18q23	0.693	1
10p-Del	Del_18q23	0.694	1
22q-Del	Amp_7q32.3	0.694	1
Amp_8q24.13	Del_18q23	0.694	1
PRNP	Del_1p36.32	0.696	1
UBE2G2	Del_1p36.32	0.696	1
FAM47C	7q-Amp	0.696	1
MYH2	Del_11p15.5	0.697	1
Amp_7q31.2	Del_6q22.31	0.697	1
Amp_17q25.1	Del_11p15.5	0.697	1
Amp_17q25.1	Del_13q14.2	0.697	1
ARID1A	MYH2	0.699	1
ARID1A	BCOR	0.699	1
MYH2	10p-Amp	0.699	1
MYH2	11q-Amp	0.699	1
MYH2	4p-Del	0.699	1
PIK3CA	10q-Del	0.699	1
PRNP	19q-Del	0.699	1
UBE2G2	19q-Del	0.699	1
BCOR	10p-Amp	0.699	1
BCOR	11q-Amp	0.699	1
4p-Del	Amp_17q25.1	0.699	1
BRAF	7p-Amp	0.7	1
BRAF	Del_4q34.3	0.7	1
NF1	NOTCH1	0.7	1
NKX2-1	10q-Del	0.7	1
NKX2-1	Del_4q34.3	0.7	1
NOTCH1	Amp_11q24.1	0.7	1
TMEM216	10q-Del	0.7	1
ZNF709	7p-Amp	0.7	1
ZNF709	10q-Del	0.7	1
ZNF709	Del_4q34.3	0.7	1
TRERF1	7p-Amp	0.7	1
TRERF1	10q-Del	0.7	1
TRERF1	Del_4q34.3	0.7	1
10q-Del	Del_1q43	0.7	1
Amp_1q22	Del_10q26.3	0.7	1
Del_1q43	Del_4q34.3	0.7	1
FUBP1	IDH2	0.701	1
PIK3R1	13q-Del	0.701	1
SLC6A3	Del_3p21.31	0.701	1
SLC6A3	Del_12q12	0.701	1
SMARCA4	13q-Del	0.701	1
TCF12	9p-Del	0.701	1
ZBTB20	6q-Del	0.701	1
FAM47C	Del_3p21.31	0.701	1
FAM47C	Del_12q12	0.701	1
13q-Del	Amp_19p13.3	0.701	1
Del_5p15.33	Del_18q23	0.701	1
EIF1AX	13q-Del	0.703	1
EIF1AX	6q-Del	0.703	1
HTRA2	13q-Del	0.703	1
OR5T3	13q-Del	0.703	1
PRNP	Del_1p32.3	0.703	1
SPANXE	6q-Del	0.703	1
UBE2G2	Del_1p32.3	0.703	1
DDX5	13q-Del	0.703	1
DDX5	6q-Del	0.703	1
GAGE2B	13q-Del	0.703	1
GAGE2B	6q-Del	0.703	1
PLCG1	13q-Del	0.703	1
ROBO3	13q-Del	0.703	1
13q-Del	9q-Del	0.703	1
13q-Del	Amp_Xp11.22	0.703	1
13q-Del	Del_Xq21.1	0.703	1
ARID1A	TP53	0.705	1
Amp_7q32.3	Del_11p15.1	0.705	1
ARID1A	Del_22q13.31	0.706	1
SMARCA4	Del_14q24.3	0.706	1
ZBTB20	Del_14q24.3	0.706	1
4p-Del	Del_11p15.1	0.706	1
4p-Del	Del_22q13.31	0.706	1
CREBZF	NF1	0.707	1
CREBZF	22q-Del	0.707	1
CREBZF	Amp_11q24.1	0.707	1
EGFR	Del_4q34.3	0.707	1
FSTL5	22q-Del	0.707	1
IDH2	STK19	0.707	1
IDH2	TCF12	0.707	1
IDH2	VAV3	0.707	1
IDH2	12q-Del	0.707	1
IDH2	15q-Del	0.707	1
IDH2	Amp_1q32.1	0.707	1
IDH2	Amp_3q26.33	0.707	1
IDH2	Amp_19p13.2	0.707	1
IDH2	Del_3q29	0.707	1
IDH2	Del_8q24.3	0.707	1
LRRC37A2	NF1	0.707	1
LRRC37A2	22q-Del	0.707	1
NF1	19p-Amp	0.707	1
NF1	Xq-Del	0.707	1
NF1	Amp_2p24.3	0.707	1
PTPN11	Amp_11q24.1	0.707	1
STK19	Del_5p15.33	0.707	1
TCF12	Amp_12q14.1	0.707	1
TCF12	Del_5p15.33	0.707	1
VAV3	Amp_12q14.1	0.707	1
VAV3	Del_5p15.33	0.707	1
PCDHAC2	10q-Del	0.707	1
IRS4	Amp_11q24.1	0.707	1
19p-Amp	Amp_11q24.1	0.707	1
7p-Amp	18p-Del	0.707	1
12q-Del	Amp_12q14.1	0.707	1
12q-Del	Del_5p15.33	0.707	1
15q-Del	Amp_12q14.1	0.707	1
22q-Del	Amp_2p24.3	0.707	1
Amp_12q14.1	Del_8q24.3	0.707	1
Del_3q29	Del_5p15.33	0.707	1
BRAF	Amp_8q24.13	0.708	1
BRAF	Del_6q22.31	0.708	1
NKX2-1	10p-Del	0.708	1
NKX2-1	Del_6q22.31	0.708	1
TMEM216	10p-Del	0.708	1
ZNF709	10p-Del	0.708	1
ZNF709	Amp_8q24.13	0.708	1
ZNF709	Del_6q22.31	0.708	1
TRERF1	10p-Del	0.708	1
TRERF1	Del_6q22.31	0.708	1
10p-Del	Del_1q43	0.708	1
ATRX	MYH2	0.709	1
MYH2	Del_6q24.3	0.709	1
Amp_17q25.1	Del_6q24.3	0.709	1
F13A1	7q-Amp	0.71	1
F13A1	Amp_7p11.2	0.71	1
OR5D18	7q-Amp	0.71	1
OR5D18	Amp_7p11.2	0.71	1
PIK3CA	Del_9p23	0.71	1
PRCP	7q-Amp	0.71	1
TNFRSF9	7q-Amp	0.71	1
IDH2	7q-Amp	0.712	1
EIF1AX	11p-Del	0.714	1
EIF1AX	14q-Del	0.714	1
HTRA2	14q-Del	0.714	1
OR5T3	14q-Del	0.714	1
SPANXE	14q-Del	0.714	1
DDX5	11p-Del	0.714	1
DDX5	14q-Del	0.714	1
GAGE2B	11p-Del	0.714	1
GAGE2B	14q-Del	0.714	1
PLCG1	11p-Del	0.714	1
ROBO3	11p-Del	0.714	1
ROBO3	14q-Del	0.714	1
14q-Del	Amp_Xp11.22	0.714	1
14q-Del	Del_Xq21.1	0.714	1
TP53	Amp_7q32.3	0.715	1
7q-Amp	11p-Del	0.715	1
11p-Del	Del_6q24.3	0.715	1
SMARCA4	1p-Del	0.717	1
IDH1	13q-Del	0.718	1
IDH2	PIK3CA	0.718	1
PIK3CA	Amp_12q14.1	0.718	1
11p-Del	Amp_7q32.3	0.718	1
18q-Del	Del_10q26.3	0.718	1
Amp_12q14.1	Del_2q37.3	0.718	1
ZBTB20	11p-Del	0.719	1
ZBTB20	14q-Del	0.719	1
11p-Del	Amp_19p13.3	0.719	1
Amp_11q24.1	Del_11p15.1	0.719	1
PIK3CA	10p-Del	0.72	1
PIK3CA	Del_6q22.31	0.72	1
PIK3R1	SLC6A3	0.72	1
PIK3R1	FAM47C	0.72	1
PIK3R1	Amp_4q12	0.72	1
PIK3R1	Del_3q13.31	0.72	1
PRNP	1p-Del	0.72	1
PTEN	SLC6A3	0.72	1
PTEN	FAM47C	0.72	1
PTEN	Amp_4q12	0.72	1
PTEN	Amp_13q34	0.72	1
SLC6A3	ZBTB20	0.72	1
SLC6A3	8q-Amp	0.72	1
SLC6A3	Amp_19p13.3	0.72	1
SMARCA4	FAM47C	0.72	1
SMARCA4	Amp_4q12	0.72	1
SMARCA4	Amp_13q34	0.72	1
UBE2G2	1p-Del	0.72	1
ZBTB20	FAM47C	0.72	1
ZBTB20	Amp_4q12	0.72	1
ZBTB20	Amp_13q34	0.72	1
ZBTB20	Del_3q13.31	0.72	1
FAM47C	8q-Amp	0.72	1
FAM47C	Amp_19p13.3	0.72	1
8q-Amp	Amp_13q34	0.72	1
Amp_4q12	Amp_19p13.3	0.72	1
Amp_19p13.3	Del_3q13.31	0.72	1
Del_3p21.31	Del_19q13.41	0.72	1
MYH2	Del_1p36.32	0.722	1
PDGFRA	18q-Del	0.722	1
PDGFRA	4q-Del	0.722	1
PDGFRA	Del_6p25.3	0.722	1
18q-Del	Amp_1q22	0.722	1
18q-Del	Del_5q34	0.722	1
Amp_17q25.1	Del_1p36.32	0.722	1
CIC	Amp_11q24.1	0.723	1
PCDHAC2	10p-Del	0.724	1
BRAF	NOTCH1	0.725	1
NKX2-1	NOTCH1	0.725	1
NOTCH1	TMEM216	0.725	1
NOTCH1	TRERF1	0.725	1
NOTCH1	Del_1q43	0.725	1
Amp_4q12	Del_14q24.3	0.726	1
Amp_10p15.3	Del_12q12	0.726	1
Amp_13q34	Del_14q24.3	0.726	1
DYNC1I1	Del_14q24.3	0.727	1
F13A1	Del_14q24.3	0.727	1
OR5D18	Del_14q24.3	0.727	1
TNFRSF9	Del_14q24.3	0.727	1
ARID1A	STK19	0.728	1
ARID1A	TCF12	0.728	1
ARID1A	VAV3	0.728	1
ARID1A	12q-Del	0.728	1
ARID1A	Amp_1q32.1	0.728	1
ARID1A	Amp_3q26.33	0.728	1
ARID1A	Del_3q29	0.728	1
MYH2	TP53	0.728	1
SLC6A3	Del_19q13.41	0.728	1
STK19	10p-Amp	0.728	1
STK19	11q-Amp	0.728	1
STK19	4p-Del	0.728	1
TCF12	10p-Amp	0.728	1
VAV3	10p-Amp	0.728	1
VAV3	11q-Amp	0.728	1
VAV3	4p-Del	0.728	1
10p-Amp	15q-Del	0.728	1
10p-Amp	Amp_1q32.1	0.728	1
10p-Amp	Amp_3q26.33	0.728	1
10p-Amp	Amp_19p13.2	0.728	1
11q-Amp	12q-Del	0.728	1
11q-Amp	Amp_1q32.1	0.728	1
11q-Amp	Amp_3q26.33	0.728	1
11q-Amp	Amp_19p13.2	0.728	1
11q-Amp	Del_8q24.3	0.728	1
7q-Amp	Del_6q24.3	0.728	1
4p-Del	Amp_1q32.1	0.728	1
4p-Del	Amp_3q26.33	0.728	1
4p-Del	Amp_19p13.2	0.728	1
4p-Del	Del_8q24.3	0.728	1
ARID1A	ATRX	0.729	1
ARID1A	Del_19q13.42	0.729	1
ATRX	11q-Amp	0.729	1
10p-Amp	Del_9p21.3	0.73	1
18p-Del	Amp_7p11.2	0.73	1
9p-Del	Del_18q23	0.73	1
Amp_7q31.2	Del_6p25.3	0.731	1
BRAF	Del_11p15.1	0.733	1
EGFR	PCDHAC2	0.733	1
NKX2-1	Del_11p15.1	0.733	1
NKX2-1	Del_22q13.31	0.733	1
TMEM216	Del_11p15.1	0.733	1
TMEM216	Del_22q13.31	0.733	1
ZNF709	Del_22q13.31	0.733	1
PCDHAC2	18p-Del	0.733	1
TRERF1	Del_11p15.1	0.733	1
TRERF1	Del_22q13.31	0.733	1
Del_1q43	Del_11p15.1	0.733	1
Del_1q43	Del_22q13.31	0.733	1
CREBZF	EGFR	0.734	1
CREBZF	PCDHAC2	0.734	1
EGFR	FSTL5	0.734	1
EGFR	LRRC37A2	0.734	1
EGFR	PTPN11	0.734	1
EGFR	IRS4	0.734	1
EGFR	Amp_2p24.3	0.734	1
EGFR	Del_7p22.3	0.734	1
FSTL5	PCDHAC2	0.734	1
FSTL5	18p-Del	0.734	1
IDH2	13q-Del	0.734	1
PTPN11	PCDHAC2	0.734	1
PTPN11	18p-Del	0.734	1
BCOR	7p-Amp	0.734	1
BCOR	10q-Del	0.734	1
PCDHAC2	19p-Amp	0.734	1
PCDHAC2	Xq-Del	0.734	1
PCDHAC2	Del_7p22.3	0.734	1
19p-Amp	18p-Del	0.734	1
13q-Del	Amp_12q14.1	0.734	1
18p-Del	Amp_2p24.3	0.734	1
18p-Del	Del_7p22.3	0.734	1
6q-Del	Del_5p15.33	0.734	1
Amp_17q25.1	Del_4q34.3	0.734	1
EIF1AX	Amp_10p15.3	0.736	1
HTRA2	Amp_10p15.3	0.736	1
OR5T3	Amp_10p15.3	0.736	1
PLCG1	Amp_10p15.3	0.736	1
7q-Amp	Del_11p15.1	0.736	1
9q-Del	Amp_10p15.3	0.736	1
Amp_10p15.3	Amp_Xp11.22	0.736	1
FUBP1	11q-Amp	0.737	1
10p-Amp	Del_18q23	0.737	1
4p-Del	Del_18q23	0.737	1
IDH2	SLC6A3	0.738	1
IDH2	FAM47C	0.738	1
IDH2	Amp_4q12	0.738	1
IDH2	Amp_13q34	0.738	1
IDH2	Del_3q13.31	0.738	1
NF1	4q-Del	0.738	1
SLC6A3	Amp_12q14.1	0.738	1
SLC6A3	Del_5p15.33	0.738	1
FAM47C	Amp_12q14.1	0.738	1
FAM47C	Del_5p15.33	0.738	1
4q-Del	Amp_11q24.1	0.738	1
Amp_1q22	Del_3p21.31	0.738	1
Amp_1q22	Del_12q12	0.738	1
Amp_12q14.1	Del_3q13.31	0.738	1
Del_3q13.31	Del_5p15.33	0.738	1
Amp_17q25.1	Del_1p32.3	0.739	1
DYNC1I1	TP53	0.74	1
F13A1	TP53	0.74	1
OR5D18	TP53	0.74	1
PRCP	TP53	0.74	1
TNFRSF9	TP53	0.74	1
13q-Del	Del_1p32.3	0.743	1
DYNC1I1	9p-Del	0.745	1
F13A1	9p-Del	0.745	1
STK19	Del_13q14.2	0.745	1
TCF12	Del_11p15.5	0.745	1
TNFRSF9	9p-Del	0.745	1
VAV3	Del_11p15.5	0.745	1
15q-Del	Del_11p15.5	0.745	1
19q-Del	Del_5q34	0.745	1
Amp_1q32.1	Del_13q14.2	0.745	1
Amp_3q26.33	Del_13q14.2	0.745	1
Del_8q24.3	Del_11p15.5	0.745	1
IDH1	LRRC37A2	0.746	1
IDH1	IRS4	0.746	1
IDH1	Del_7p22.3	0.746	1
10p-Del	13q-Del	0.746	1
FSTL5	Amp_7q32.3	0.747	1
MYH2	Amp_8q24.13	0.747	1
MYH2	Del_6q22.31	0.747	1
BCOR	10p-Del	0.747	1
BCOR	Amp_8q24.13	0.747	1
BCOR	Amp_17q25.1	0.747	1
IRS4	Amp_7q32.3	0.747	1
Del_6q22.31	Del_19q13.42	0.747	1
HTRA2	Del_9p21.3	0.748	1
SPANXE	Del_9p21.3	0.748	1
DDX5	Del_9p21.3	0.748	1
GAGE2B	Del_9p21.3	0.748	1
ROBO3	Del_9p21.3	0.748	1
Del_9p21.3	Del_Xq21.1	0.748	1
Del_13q14.2	Del_19q13.41	0.748	1
14q-Del	Amp_12q14.1	0.75	1
BRAF	FUBP1	0.751	1
BRAF	Del_18q23	0.751	1
FUBP1	TMEM216	0.751	1
FUBP1	TRERF1	0.751	1
FUBP1	Del_1q43	0.751	1
MYH2	Amp_7q32.3	0.751	1
NF1	Del_9p23	0.751	1
NKX2-1	Del_18q23	0.751	1
TMEM216	Del_18q23	0.751	1
ZNF709	Del_18q23	0.751	1
BCOR	Amp_7q32.3	0.751	1
Amp_1q22	Del_1p32.3	0.751	1
Amp_7q32.3	Amp_17q25.1	0.751	1
Del_1q43	Del_18q23	0.751	1
ARID1A	Amp_12p13.32	0.752	1
ARID1A	Del_2q37.3	0.752	1
7p-Amp	14q-Del	0.753	1
TP53	Del_14q24.3	0.754	1
Amp_10p15.3	Del_13q14.2	0.754	1
HSPB8	Del_9p21.3	0.755	1
PDGFRA	PIK3R1	0.755	1
PDGFRA	PTEN	0.755	1
PDGFRA	SMARCA4	0.755	1
PDGFRA	8q-Amp	0.755	1
PDGFRA	Amp_19p13.3	0.755	1
PIK3R1	Amp_1q22	0.755	1
PIK3R1	Del_5q34	0.755	1
PRNP	Del_9p21.3	0.755	1
PTEN	Amp_1q22	0.755	1
PTEN	Del_5q34	0.755	1
SMARCA4	Amp_1q22	0.755	1
UBE2G2	Del_9p21.3	0.755	1
ZBTB20	Amp_1q22	0.755	1
ZBTB20	Del_5q34	0.755	1
9p-Del	Amp_13q34	0.755	1
Amp_1q22	Amp_19p13.3	0.755	1
Amp_19p13.3	Del_5q34	0.755	1
12q-Del	Del_6q24.3	0.756	1
Amp_1q32.1	Del_6q24.3	0.756	1
ATRX	6q-Del	0.757	1
NF1	Del_18q23	0.757	1
22q-Del	Del_18q23	0.757	1
ARID1A	SLC6A3	0.758	1
ARID1A	FAM47C	0.758	1
ARID1A	Amp_4q12	0.758	1
ARID1A	Amp_13q34	0.758	1
ARID1A	Del_3q13.31	0.758	1
EIF1AX	NF1	0.758	1
EIF1AX	22q-Del	0.758	1
HTRA2	NF1	0.758	1
HTRA2	Amp_11q24.1	0.758	1
NF1	OR5T3	0.758	1
NF1	SPANXE	0.758	1
NF1	DDX5	0.758	1
NF1	GAGE2B	0.758	1
NF1	PLCG1	0.758	1
NF1	ROBO3	0.758	1
NF1	9q-Del	0.758	1
NF1	Amp_Xp11.22	0.758	1
NF1	Del_Xq21.1	0.758	1
OR5T3	22q-Del	0.758	1
OR5T3	Amp_11q24.1	0.758	1
SLC6A3	10p-Amp	0.758	1
SLC6A3	11q-Amp	0.758	1
SLC6A3	4p-Del	0.758	1
SPANXE	22q-Del	0.758	1
SPANXE	Amp_11q24.1	0.758	1
DDX5	Amp_11q24.1	0.758	1
FAM47C	10p-Amp	0.758	1
FAM47C	11q-Amp	0.758	1
FAM47C	4p-Del	0.758	1
GAGE2B	Amp_11q24.1	0.758	1
ROBO3	22q-Del	0.758	1
10p-Amp	Amp_13q34	0.758	1
11q-Amp	Amp_4q12	0.758	1
11q-Amp	Del_3q13.31	0.758	1
4p-Del	Amp_13q34	0.758	1
9q-Del	Amp_11q24.1	0.758	1
Amp_11q24.1	Amp_Xp11.22	0.758	1
BRAF	PIK3CA	0.759	1
BRAF	Amp_12p13.32	0.759	1
BRAF	Del_2q37.3	0.759	1
NKX2-1	PIK3CA	0.759	1
NKX2-1	Amp_12p13.32	0.759	1
NKX2-1	Del_2q37.3	0.759	1
NOTCH1	18p-Del	0.759	1
PIK3CA	TMEM216	0.759	1
PIK3CA	TRERF1	0.759	1
PIK3CA	Del_1q43	0.759	1
SLC6A3	TP53	0.759	1
TMEM216	Amp_12p13.32	0.759	1
TMEM216	Del_2q37.3	0.759	1
TP53	Amp_4q12	0.759	1
ZNF709	Amp_12p13.32	0.759	1
ZNF709	Del_2q37.3	0.759	1
TRERF1	Amp_12p13.32	0.759	1
TRERF1	Del_2q37.3	0.759	1
10p-Amp	7q-Amp	0.759	1
Amp_12p13.32	Del_1q43	0.759	1
Del_1q43	Del_2q37.3	0.759	1
PDGFRA	Amp_7p11.2	0.76	1
6q-Del	Amp_7q31.2	0.76	1
Amp_1q22	Amp_7p11.2	0.76	1
Amp_7q31.2	Del_6q24.3	0.76	1
CIC	PTPN11	0.761	1
CIC	IRS4	0.761	1
Del_9p21.3	Del_12q12	0.761	1
CREBZF	Del_6p25.3	0.762	1
FSTL5	18q-Del	0.762	1
FSTL5	4q-Del	0.762	1
FSTL5	Del_6p25.3	0.762	1
LRRC37A2	4q-Del	0.762	1
LRRC37A2	Del_6p25.3	0.762	1
PTPN11	18q-Del	0.762	1
PTPN11	4q-Del	0.762	1
PTPN11	Del_6p25.3	0.762	1
IRS4	4q-Del	0.762	1
19p-Amp	18q-Del	0.762	1
19p-Amp	4q-Del	0.762	1
19p-Amp	Del_6p25.3	0.762	1
18q-Del	Xq-Del	0.762	1
18q-Del	Amp_2p24.3	0.762	1
18q-Del	Del_7p22.3	0.762	1
4q-Del	Xq-Del	0.762	1
4q-Del	Amp_2p24.3	0.762	1
4q-Del	Del_7p22.3	0.762	1
Del_9p23	Del_12q12	0.763	1
22q-Del	Amp_7q31.2	0.764	1
11p-Del	Del_14q24.3	0.765	1
ARID1A	6q-Del	0.767	1
4p-Del	6q-Del	0.767	1
BRAF	13q-Del	0.768	1
BRAF	6q-Del	0.768	1
NKX2-1	13q-Del	0.768	1
NKX2-1	6q-Del	0.768	1
TMEM216	6q-Del	0.768	1
ZNF709	13q-Del	0.768	1
ZNF709	6q-Del	0.768	1
TRERF1	13q-Del	0.768	1
TRERF1	6q-Del	0.768	1
13q-Del	Del_1q43	0.768	1
Amp_10p15.3	Del_9p21.3	0.769	1
DYNC1I1	Del_11p15.5	0.77	1
DYNC1I1	Del_13q14.2	0.77	1
F13A1	Del_11p15.5	0.77	1
OR5D18	Del_11p15.5	0.77	1
OR5D18	Del_13q14.2	0.77	1
PRCP	Del_11p15.5	0.77	1
PRCP	Del_13q14.2	0.77	1
TNFRSF9	Del_11p15.5	0.77	1
TNFRSF9	Del_13q14.2	0.77	1
IDH2	PDGFRA	0.771	1
IDH2	Amp_1q22	0.771	1
IDH2	Del_5q34	0.771	1
MYH2	NOTCH1	0.771	1
PDGFRA	Del_5p15.33	0.771	1
Amp_1q22	Del_5p15.33	0.771	1
Amp_10p15.3	Del_6q24.3	0.771	1
Del_5p15.33	Del_5q34	0.771	1
MYH2	STK19	0.772	1
MYH2	TCF12	0.772	1
MYH2	VAV3	0.772	1
MYH2	Amp_3q26.33	0.772	1
MYH2	Del_3q29	0.772	1
MYH2	Del_8q24.3	0.772	1
STK19	BCOR	0.772	1
TCF12	BCOR	0.772	1
TCF12	Amp_17q25.1	0.772	1
VAV3	BCOR	0.772	1
VAV3	Amp_17q25.1	0.772	1
BCOR	12q-Del	0.772	1
BCOR	15q-Del	0.772	1
BCOR	Amp_19p13.2	0.772	1
BCOR	Del_3q29	0.772	1
7p-Amp	4q-Del	0.772	1
7p-Amp	Del_6p25.3	0.772	1
11p-Del	Del_6q22.31	0.772	1
12q-Del	Amp_17q25.1	0.772	1
15q-Del	Amp_17q25.1	0.772	1
Amp_1q32.1	Amp_17q25.1	0.772	1
Amp_17q25.1	Amp_19p13.2	0.772	1
Amp_17q25.1	Del_3q29	0.772	1
Amp_17q25.1	Del_8q24.3	0.772	1
Del_18q23	Del_19q13.42	0.772	1
Del_6q24.3	Del_11p15.1	0.774	1
FSTL5	Del_9p23	0.775	1
FSTL5	Del_10q26.3	0.775	1
LRRC37A2	Del_9p23	0.775	1
PTPN11	Del_9p23	0.775	1
Xq-Del	Del_10q26.3	0.775	1
Amp_2p24.3	Del_10q26.3	0.775	1
ARID1A	Del_19q13.41	0.776	1
DYNC1I1	Del_6q24.3	0.776	1
IDH1	Del_13q14.2	0.776	1
OR5D18	Del_6q24.3	0.776	1
PIK3CA	22q-Del	0.776	1
PIK3CA	Amp_11q24.1	0.776	1
TNFRSF9	Del_6q24.3	0.776	1
Del_6q24.3	Del_12q12	0.776	1
BRAF	11p-Del	0.777	1
BRAF	14q-Del	0.777	1
CREBZF	Del_12q12	0.777	1
FSTL5	Del_12q12	0.777	1
LRRC37A2	Del_3p21.31	0.777	1
LRRC37A2	Del_12q12	0.777	1
NKX2-1	11p-Del	0.777	1
NKX2-1	14q-Del	0.777	1
PTPN11	Del_3p21.31	0.777	1
PTPN11	Del_12q12	0.777	1
TMEM216	11p-Del	0.777	1
TMEM216	14q-Del	0.777	1
TP53	Del_9p21.3	0.777	1
ZNF709	14q-Del	0.777	1
IRS4	Del_12q12	0.777	1
TRERF1	11p-Del	0.777	1
19p-Amp	Del_12q12	0.777	1
11p-Del	Del_1q43	0.777	1
Xq-Del	Del_12q12	0.777	1
Amp_2p24.3	Del_3p21.31	0.777	1
Del_7p22.3	Del_12q12	0.777	1
STK19	7p-Amp	0.778	1
STK19	Del_4q34.3	0.778	1
TCF12	7p-Amp	0.778	1
TCF12	10q-Del	0.778	1
TCF12	Del_4q34.3	0.778	1
VAV3	10q-Del	0.778	1
7p-Amp	Del_3q29	0.778	1
10q-Del	Del_3q29	0.778	1
18p-Del	Amp_7q32.3	0.778	1
1p-Del	Amp_17q25.1	0.778	1
Amp_19p13.2	Del_4q34.3	0.778	1
Del_4q34.3	Del_8q24.3	0.778	1
EGFR	4q-Del	0.779	1
EGFR	Del_6p25.3	0.779	1
NKX2-1	Del_1p36.32	0.78	1
TMEM216	Del_1p36.32	0.78	1
ZNF709	Del_1p36.32	0.78	1
7q-Amp	Amp_10p15.3	0.78	1
Del_1p36.32	Del_1q43	0.78	1
ARID1A	14q-Del	0.782	1
EGFR	EIF1AX	0.782	1
EGFR	HTRA2	0.782	1
EGFR	SPANXE	0.782	1
EGFR	DDX5	0.782	1
EGFR	GAGE2B	0.782	1
EGFR	ROBO3	0.782	1
EGFR	9q-Del	0.782	1
EGFR	Amp_Xp11.22	0.782	1
EGFR	Del_Xq21.1	0.782	1
EIF1AX	PCDHAC2	0.782	1
EIF1AX	18p-Del	0.782	1
FSTL5	Amp_7q31.2	0.782	1
HTRA2	PCDHAC2	0.782	1
HTRA2	18p-Del	0.782	1
IDH1	4p-Del	0.782	1
OR5T3	18p-Del	0.782	1
SPANXE	PCDHAC2	0.782	1
SPANXE	18p-Del	0.782	1
PCDHAC2	DDX5	0.782	1
PCDHAC2	GAGE2B	0.782	1
PCDHAC2	ROBO3	0.782	1
PCDHAC2	9q-Del	0.782	1
PCDHAC2	Amp_Xp11.22	0.782	1
PCDHAC2	Del_Xq21.1	0.782	1
GAGE2B	18p-Del	0.782	1
IRS4	Amp_7q31.2	0.782	1
PLCG1	18p-Del	0.782	1
ROBO3	18p-Del	0.782	1
11p-Del	4p-Del	0.782	1
18p-Del	9q-Del	0.782	1
18p-Del	Amp_Xp11.22	0.782	1
18p-Del	Del_Xq21.1	0.782	1
MYH2	Del_11p15.1	0.783	1
Amp_17q25.1	Del_11p15.1	0.783	1
Amp_17q25.1	Del_22q13.31	0.783	1
NKX2-1	19q-Del	0.784	1
TMEM216	19q-Del	0.784	1
ZNF709	19q-Del	0.784	1
19q-Del	Del_1q43	0.784	1
CIC	ZBTB20	0.785	1
CIC	Amp_19p13.3	0.785	1
NOTCH1	13q-Del	0.785	1
PDGFRA	Del_14q24.3	0.785	1
13q-Del	9p-Del	0.785	1
Del_5q34	Del_14q24.3	0.785	1
4q-Del	Amp_8q24.13	0.786	1
Amp_8q24.13	Del_6p25.3	0.786	1
MYH2	Del_9p23	0.787	1
Amp_17q25.1	Del_9p23	0.787	1
F13A1	7p-Amp	0.788	1
F13A1	10q-Del	0.788	1
F13A1	Del_4q34.3	0.788	1
NKX2-1	Del_1p32.3	0.788	1
OR5D18	7p-Amp	0.788	1
OR5D18	10q-Del	0.788	1
OR5D18	Del_4q34.3	0.788	1
PRCP	7p-Amp	0.788	1
PRCP	Del_4q34.3	0.788	1
TMEM216	Del_1p32.3	0.788	1
TNFRSF9	7p-Amp	0.788	1
TNFRSF9	10q-Del	0.788	1
TNFRSF9	Del_4q34.3	0.788	1
ZNF709	Del_1p32.3	0.788	1
Del_1p32.3	Del_1q43	0.788	1
ARID1A	PDGFRA	0.789	1
ARID1A	Amp_1q22	0.789	1
ARID1A	Del_5q34	0.789	1
PDGFRA	10p-Amp	0.789	1
PDGFRA	11q-Amp	0.789	1
PDGFRA	4p-Del	0.789	1
STK19	Amp_8q24.13	0.789	1
TCF12	10p-Del	0.789	1
TCF12	Amp_8q24.13	0.789	1
VAV3	10p-Del	0.789	1
10p-Amp	Amp_1q22	0.789	1
11q-Amp	Amp_1q22	0.789	1
11q-Amp	Del_5q34	0.789	1
10p-Del	Del_3q29	0.789	1
14q-Del	Del_1p32.3	0.789	1
4p-Del	Amp_1q22	0.789	1
Amp_1q32.1	Del_6q22.31	0.789	1
Amp_3q26.33	Amp_8q24.13	0.789	1
Del_11p15.1	Del_14q24.3	0.789	1
NF1	PIK3R1	0.79	1
PIK3R1	Amp_11q24.1	0.79	1
SMARCA4	Amp_11q24.1	0.79	1
TP53	Amp_12q14.1	0.79	1
8q-Amp	Amp_11q24.1	0.79	1
22q-Del	Amp_19p13.3	0.79	1
Amp_11q24.1	Amp_19p13.3	0.79	1
CREBZF	PTEN	0.791	1
CREBZF	SMARCA4	0.791	1
CREBZF	ZBTB20	0.791	1
CREBZF	8q-Amp	0.791	1
CREBZF	Amp_19p13.3	0.791	1
FSTL5	PTEN	0.791	1
FSTL5	SMARCA4	0.791	1
FSTL5	ZBTB20	0.791	1
FSTL5	8q-Amp	0.791	1
LRRC37A2	PIK3R1	0.791	1
LRRC37A2	PTEN	0.791	1
LRRC37A2	SMARCA4	0.791	1
LRRC37A2	ZBTB20	0.791	1
LRRC37A2	8q-Amp	0.791	1
LRRC37A2	Amp_19p13.3	0.791	1
PIK3R1	PTPN11	0.791	1
PIK3R1	IRS4	0.791	1
PIK3R1	19p-Amp	0.791	1
PIK3R1	Xq-Del	0.791	1
PIK3R1	Amp_2p24.3	0.791	1
PIK3R1	Del_7p22.3	0.791	1
PTEN	IRS4	0.791	1
PTEN	Amp_2p24.3	0.791	1
PTEN	Del_7p22.3	0.791	1
PTPN11	SMARCA4	0.791	1
PTPN11	ZBTB20	0.791	1
PTPN11	8q-Amp	0.791	1
PTPN11	Amp_19p13.3	0.791	1
SMARCA4	IRS4	0.791	1
SMARCA4	19p-Amp	0.791	1
SMARCA4	Xq-Del	0.791	1
SMARCA4	Amp_2p24.3	0.791	1
TP53	Del_4q34.3	0.791	1
ZBTB20	19p-Amp	0.791	1
ZBTB20	Xq-Del	0.791	1
ZBTB20	Amp_2p24.3	0.791	1
ZBTB20	Del_7p22.3	0.791	1
IRS4	8q-Amp	0.791	1
IRS4	Amp_19p13.3	0.791	1
19p-Amp	8q-Amp	0.791	1
8q-Amp	Xq-Del	0.791	1
8q-Amp	Del_7p22.3	0.791	1
Xq-Del	Amp_19p13.3	0.791	1
Amp_2p24.3	Amp_19p13.3	0.791	1
Amp_19p13.3	Del_7p22.3	0.791	1
ARID1A	19q-Del	0.792	1
FAM47C	Del_11p15.5	0.794	1
6q-Del	Amp_11q24.1	0.794	1
BRAF	Amp_10p15.3	0.795	1
DYNC1I1	Del_6q22.31	0.795	1
F13A1	10p-Del	0.795	1
F13A1	Amp_8q24.13	0.795	1
F13A1	Del_6q22.31	0.795	1
NKX2-1	Amp_10p15.3	0.795	1
OR5D18	10p-Del	0.795	1
PRCP	Amp_8q24.13	0.795	1
STK19	TCF12	0.795	1
STK19	12q-Del	0.795	1
STK19	15q-Del	0.795	1
STK19	Amp_1q32.1	0.795	1
STK19	Del_3q29	0.795	1
STK19	Del_8q24.3	0.795	1
TCF12	12q-Del	0.795	1
TCF12	15q-Del	0.795	1
TCF12	Amp_3q26.33	0.795	1
TCF12	Del_3q29	0.795	1
TCF12	Del_8q24.3	0.795	1
TMEM216	Amp_10p15.3	0.795	1
TNFRSF9	10p-Del	0.795	1
TNFRSF9	Amp_8q24.13	0.795	1
TNFRSF9	Del_6q22.31	0.795	1
VAV3	Amp_1q32.1	0.795	1
VAV3	Amp_19p13.2	0.795	1
VAV3	Del_3q29	0.795	1
VAV3	Del_8q24.3	0.795	1
ZNF709	Amp_10p15.3	0.795	1
TRERF1	Amp_10p15.3	0.795	1
12q-Del	Amp_1q32.1	0.795	1
12q-Del	Amp_19p13.2	0.795	1
12q-Del	Del_8q24.3	0.795	1
15q-Del	Del_3q29	0.795	1
15q-Del	Del_8q24.3	0.795	1
Amp_1q32.1	Del_3q29	0.795	1
Amp_3q26.33	Del_3q29	0.795	1
Amp_10p15.3	Del_1q43	0.795	1
Amp_19p13.2	Del_3q29	0.795	1
Amp_19p13.2	Del_8q24.3	0.795	1
Del_1p32.3	Del_4q34.3	0.795	1
MYH2	Amp_7q31.2	0.796	1
BCOR	Amp_7q31.2	0.796	1
Amp_7q31.2	Amp_17q25.1	0.796	1
PIK3R1	Del_11p15.5	0.797	1
PIK3R1	Del_13q14.2	0.797	1
7p-Amp	Del_9p23	0.797	1
Amp_19p13.3	Del_13q14.2	0.797	1
MYH2	SLC6A3	0.798	1
MYH2	FAM47C	0.798	1
MYH2	Amp_13q34	0.798	1
MYH2	Del_3q13.31	0.798	1
SLC6A3	BCOR	0.798	1
SLC6A3	Amp_17q25.1	0.798	1
BCOR	Amp_13q34	0.798	1
BCOR	Del_3q13.31	0.798	1
FAM47C	Amp_17q25.1	0.798	1
Amp_4q12	Amp_17q25.1	0.798	1
Amp_13q34	Amp_17q25.1	0.798	1
Amp_17q25.1	Del_3q13.31	0.798	1
EGFR	Del_3p21.31	0.801	1
TP53	Xq-Del	0.801	1
TP53	Del_7p22.3	0.801	1
PCDHAC2	Del_12q12	0.801	1
18p-Del	Del_3p21.31	0.801	1
Amp_19p13.2	Del_1p36.32	0.801	1
Del_13q14.2	Del_18q23	0.802	1
Amp_13q34	Del_6q24.3	0.803	1
Del_4q34.3	Del_12q12	0.803	1
HSPB8	Amp_7q32.3	0.804	1
PRNP	Amp_7q32.3	0.804	1
UBE2G2	Amp_7q32.3	0.804	1
7q-Amp	Del_6p25.3	0.804	1
Amp_7p11.2	Del_6p25.3	0.804	1
ATRX	Amp_1q22	0.805	1
EIF1AX	18q-Del	0.805	1
EIF1AX	4q-Del	0.805	1
EIF1AX	Del_6p25.3	0.805	1
HTRA2	18q-Del	0.805	1
OR5T3	18q-Del	0.805	1
OR5T3	4q-Del	0.805	1
OR5T3	Del_6p25.3	0.805	1
PIK3R1	Del_10q26.3	0.805	1
SPANXE	18q-Del	0.805	1
DDX5	18q-Del	0.805	1
DDX5	Del_6p25.3	0.805	1
GAGE2B	18q-Del	0.805	1
GAGE2B	4q-Del	0.805	1
GAGE2B	Del_6p25.3	0.805	1
PLCG1	18q-Del	0.805	1
PLCG1	4q-Del	0.805	1
PLCG1	Del_6p25.3	0.805	1
ROBO3	18q-Del	0.805	1
ROBO3	4q-Del	0.805	1
ROBO3	Del_6p25.3	0.805	1
8q-Amp	Del_10q26.3	0.805	1
18q-Del	9q-Del	0.805	1
18q-Del	Amp_Xp11.22	0.805	1
18q-Del	Del_Xq21.1	0.805	1
4q-Del	Amp_Xp11.22	0.805	1
4q-Del	Del_Xq21.1	0.805	1
Amp_Xp11.22	Del_6p25.3	0.805	1
CREBZF	IDH2	0.806	1
CREBZF	Amp_12q14.1	0.806	1
CREBZF	Del_5p15.33	0.806	1
FSTL5	Del_5p15.33	0.806	1
IDH2	LRRC37A2	0.806	1
IDH2	PTPN11	0.806	1
IDH2	IRS4	0.806	1
IDH2	19p-Amp	0.806	1
IDH2	Xq-Del	0.806	1
IDH2	Amp_2p24.3	0.806	1
IDH2	Del_7p22.3	0.806	1
LRRC37A2	Amp_12q14.1	0.806	1
LRRC37A2	Del_5p15.33	0.806	1
PTPN11	Amp_12q14.1	0.806	1
PTPN11	Del_5p15.33	0.806	1
IRS4	Amp_12q14.1	0.806	1
Xq-Del	Del_5p15.33	0.806	1
Amp_2p24.3	Amp_12q14.1	0.806	1
Amp_12q14.1	Del_7p22.3	0.806	1
Del_5p15.33	Del_7p22.3	0.806	1
DYNC1I1	NOTCH1	0.807	1
F13A1	NOTCH1	0.807	1
FUBP1	Amp_17q25.1	0.807	1
IDH1	Amp_1q22	0.807	1
MYH2	Del_18q23	0.807	1
NOTCH1	PRCP	0.807	1
NOTCH1	TNFRSF9	0.807	1
BCOR	Del_18q23	0.807	1
ATRX	HTRA2	0.808	1
ATRX	OR5T3	0.808	1
ATRX	SPANXE	0.808	1
ATRX	DDX5	0.808	1
ATRX	GAGE2B	0.808	1
ATRX	ROBO3	0.808	1
FUBP1	18p-Del	0.808	1
HTRA2	Del_19q13.42	0.808	1
NOTCH1	11p-Del	0.808	1
OR5T3	Del_19q13.42	0.808	1
PCDHAC2	Del_18q23	0.808	1
DDX5	Del_19q13.42	0.808	1
GAGE2B	Del_19q13.42	0.808	1
ROBO3	Del_19q13.42	0.808	1
Amp_Xp11.22	Del_19q13.42	0.808	1
ATRX	STK19	0.809	1
ATRX	Amp_3q26.33	0.809	1
ATRX	Del_3q29	0.809	1
ATRX	Del_8q24.3	0.809	1
PIK3R1	Del_6q24.3	0.809	1
TCF12	Amp_7q32.3	0.809	1
VAV3	Del_19q13.42	0.809	1
15q-Del	Amp_7q32.3	0.809	1
Amp_7q32.3	Del_8q24.3	0.809	1
ATRX	Del_4q34.3	0.81	1
NKX2-1	1p-Del	0.81	1
TMEM216	1p-Del	0.81	1
ZNF709	1p-Del	0.81	1
1p-Del	Del_1q43	0.81	1
Amp_7q32.3	Del_5p15.33	0.81	1
ARID1A	Amp_10p15.3	0.811	1
CIC	PRNP	0.811	1
CIC	UBE2G2	0.811	1
CIC	Del_13q14.2	0.811	1
NOTCH1	STK19	0.811	1
NOTCH1	VAV3	0.811	1
NOTCH1	Amp_19p13.2	0.811	1
11q-Amp	Amp_10p15.3	0.811	1
4p-Del	Amp_10p15.3	0.811	1
8q-Amp	Del_9p21.3	0.812	1
BRAF	22q-Del	0.813	1
BRAF	Amp_11q24.1	0.813	1
DYNC1I1	Del_11p15.1	0.813	1
F13A1	Del_11p15.1	0.813	1
F13A1	Del_22q13.31	0.813	1
NF1	NKX2-1	0.813	1
NF1	TMEM216	0.813	1
NF1	TRERF1	0.813	1
NF1	Del_1q43	0.813	1
NKX2-1	22q-Del	0.813	1
OR5D18	Del_11p15.1	0.813	1
OR5D18	Del_22q13.31	0.813	1
PRCP	Del_11p15.1	0.813	1
PRCP	Del_22q13.31	0.813	1
TMEM216	22q-Del	0.813	1
TMEM216	Amp_11q24.1	0.813	1
TNFRSF9	Del_11p15.1	0.813	1
TNFRSF9	Del_22q13.31	0.813	1
ZNF709	22q-Del	0.813	1
ZNF709	Amp_11q24.1	0.813	1
TRERF1	22q-Del	0.813	1
TRERF1	Amp_11q24.1	0.813	1
22q-Del	Del_1q43	0.813	1
Amp_7q31.2	Del_4q34.3	0.813	1
IDH2	NF1	0.815	1
Amp_11q24.1	Del_5p15.33	0.815	1
Amp_8q24.13	Del_12q12	0.816	1
Del_6q22.31	Del_12q12	0.816	1
EIF1AX	Del_3p21.31	0.817	1
EIF1AX	Del_12q12	0.817	1
HTRA2	Del_12q12	0.817	1
SPANXE	Del_3p21.31	0.817	1
SPANXE	Del_12q12	0.817	1
DDX5	Del_3p21.31	0.817	1
DDX5	Del_12q12	0.817	1
GAGE2B	Del_3p21.31	0.817	1
GAGE2B	Del_12q12	0.817	1
PLCG1	Del_3p21.31	0.817	1
ROBO3	Del_3p21.31	0.817	1
ROBO3	Del_12q12	0.817	1
9q-Del	Del_12q12	0.817	1
Amp_Xp11.22	Del_3p21.31	0.817	1
Amp_Xp11.22	Del_12q12	0.817	1
HSPB8	Del_9p23	0.818	1
HSPB8	Del_10q26.3	0.818	1
NOTCH1	Amp_7q32.3	0.818	1
PRNP	Del_9p23	0.818	1
PRNP	Del_10q26.3	0.818	1
SLC6A3	STK19	0.818	1
SLC6A3	VAV3	0.818	1
SLC6A3	12q-Del	0.818	1
SLC6A3	15q-Del	0.818	1
SLC6A3	Amp_1q32.1	0.818	1
SLC6A3	Amp_3q26.33	0.818	1
SLC6A3	Amp_19p13.2	0.818	1
SLC6A3	Del_3q29	0.818	1
SLC6A3	Del_8q24.3	0.818	1
STK19	FAM47C	0.818	1
STK19	Amp_4q12	0.818	1
STK19	Amp_13q34	0.818	1
STK19	Del_3q13.31	0.818	1
TCF12	FAM47C	0.818	1
TCF12	Amp_4q12	0.818	1
TCF12	Amp_13q34	0.818	1
TCF12	Del_3q13.31	0.818	1
UBE2G2	Del_9p23	0.818	1
UBE2G2	Del_10q26.3	0.818	1
VAV3	FAM47C	0.818	1
VAV3	Amp_4q12	0.818	1
VAV3	Del_3q13.31	0.818	1
FAM47C	12q-Del	0.818	1
FAM47C	15q-Del	0.818	1
FAM47C	Amp_1q32.1	0.818	1
FAM47C	Amp_3q26.33	0.818	1
FAM47C	Del_3q29	0.818	1
15q-Del	Amp_4q12	0.818	1
15q-Del	Del_3q13.31	0.818	1
18q-Del	4q-Del	0.818	1
Amp_1q32.1	Amp_4q12	0.818	1
Amp_1q32.1	Amp_13q34	0.818	1
Amp_1q32.1	Del_3q13.31	0.818	1
Amp_3q26.33	Amp_4q12	0.818	1
Amp_3q26.33	Del_3q13.31	0.818	1
Amp_4q12	Amp_19p13.2	0.818	1
Amp_4q12	Del_8q24.3	0.818	1
Amp_13q34	Amp_19p13.2	0.818	1
Amp_13q34	Del_8q24.3	0.818	1
Amp_19p13.2	Del_3q13.31	0.818	1
PIK3CA	BCOR	0.819	1
PIK3CA	Amp_17q25.1	0.819	1
TP53	PCDHAC2	0.819	1
Amp_12p13.32	Amp_17q25.1	0.819	1
Del_6q24.3	Del_18q23	0.819	1
PIK3CA	Del_18q23	0.82	1
Amp_12p13.32	Del_18q23	0.82	1
ARID1A	CREBZF	0.821	1
ARID1A	FSTL5	0.821	1
ARID1A	LRRC37A2	0.821	1
ARID1A	PTPN11	0.821	1
ARID1A	19p-Amp	0.821	1
ARID1A	Xq-Del	0.821	1
ARID1A	Amp_2p24.3	0.821	1
CREBZF	10p-Amp	0.821	1
CREBZF	11q-Amp	0.821	1
CREBZF	4p-Del	0.821	1
FSTL5	10p-Amp	0.821	1
FSTL5	11q-Amp	0.821	1
FSTL5	4p-Del	0.821	1
LRRC37A2	10p-Amp	0.821	1
LRRC37A2	4p-Del	0.821	1
PTPN11	10p-Amp	0.821	1
PTPN11	11q-Amp	0.821	1
PTPN11	4p-Del	0.821	1
TCF12	Del_11p15.1	0.821	1
VAV3	Del_11p15.1	0.821	1
VAV3	Del_22q13.31	0.821	1
IRS4	10p-Amp	0.821	1
IRS4	11q-Amp	0.821	1
IRS4	4p-Del	0.821	1
10p-Amp	19p-Amp	0.821	1
10p-Amp	Xq-Del	0.821	1
10p-Amp	Amp_2p24.3	0.821	1
11q-Amp	19p-Amp	0.821	1
11q-Amp	Xq-Del	0.821	1
11q-Amp	Amp_2p24.3	0.821	1
19p-Amp	4p-Del	0.821	1
15q-Del	Del_11p15.1	0.821	1
15q-Del	Del_22q13.31	0.821	1
4p-Del	Xq-Del	0.821	1
4p-Del	Amp_2p24.3	0.821	1
4p-Del	Del_7p22.3	0.821	1
9p-Del	Del_11p15.5	0.821	1
9p-Del	Del_13q14.2	0.821	1
Amp_3q26.33	Del_22q13.31	0.821	1
Amp_19p13.2	Del_22q13.31	0.821	1
Del_6q24.3	Del_19q13.42	0.821	1
Del_8q24.3	Del_11p15.1	0.821	1
Del_8q24.3	Del_22q13.31	0.821	1
HSPB8	Amp_7q31.2	0.822	1
PRNP	Amp_7q31.2	0.822	1
UBE2G2	Amp_7q31.2	0.822	1
10p-Amp	9p-Del	0.822	1
10q-Del	Amp_13q34	0.822	1
10q-Del	Del_3q13.31	0.822	1
Amp_13q34	Del_4q34.3	0.822	1
Del_6q22.31	Del_19q13.41	0.822	1
EGFR	PIK3CA	0.823	1
PIK3CA	PCDHAC2	0.823	1
PCDHAC2	Amp_12p13.32	0.823	1
IRS4	7q-Amp	0.823	1
Xq-Del	Amp_7p11.2	0.823	1
Amp_2p24.3	Amp_7p11.2	0.823	1
Amp_7p11.2	Del_7p22.3	0.823	1
EGFR	Amp_19p13.3	0.824	1
MYH2	PDGFRA	0.824	1
MYH2	Amp_1q22	0.824	1
MYH2	Del_5q34	0.824	1
PDGFRA	BCOR	0.824	1
PDGFRA	Amp_17q25.1	0.824	1
PIK3R1	PCDHAC2	0.824	1
PTEN	18p-Del	0.824	1
ZBTB20	PCDHAC2	0.824	1
ZBTB20	18p-Del	0.824	1
BCOR	Amp_1q22	0.824	1
BCOR	Del_5q34	0.824	1
18p-Del	Amp_19p13.3	0.824	1
Amp_1q22	Amp_17q25.1	0.824	1
DYNC1I1	FUBP1	0.826	1
FUBP1	OR5D18	0.826	1
FUBP1	PRCP	0.826	1
FUBP1	TNFRSF9	0.826	1
OR5D18	Del_18q23	0.826	1
TNFRSF9	Del_18q23	0.826	1
EIF1AX	Amp_7q32.3	0.827	1
OR5T3	Amp_7q32.3	0.827	1
DDX5	Amp_7q32.3	0.827	1
GAGE2B	Amp_7q32.3	0.827	1
PLCG1	Amp_7q32.3	0.827	1
PCDHAC2	Del_19q13.41	0.828	1
18q-Del	Del_22q13.31	0.828	1
4q-Del	Del_11p15.1	0.828	1
4q-Del	Del_22q13.31	0.828	1
EIF1AX	PIK3R1	0.829	1
EIF1AX	PTEN	0.829	1
EIF1AX	SMARCA4	0.829	1
EIF1AX	ZBTB20	0.829	1
EIF1AX	8q-Amp	0.829	1
HTRA2	PIK3R1	0.829	1
HTRA2	PTEN	0.829	1
HTRA2	SMARCA4	0.829	1
HTRA2	ZBTB20	0.829	1
HTRA2	Amp_19p13.3	0.829	1
OR5T3	PIK3R1	0.829	1
OR5T3	PTEN	0.829	1
OR5T3	SMARCA4	0.829	1
OR5T3	ZBTB20	0.829	1
OR5T3	8q-Amp	0.829	1
OR5T3	Amp_19p13.3	0.829	1
PIK3R1	SPANXE	0.829	1
PIK3R1	DDX5	0.829	1
PIK3R1	PLCG1	0.829	1
PIK3R1	ROBO3	0.829	1
PIK3R1	9q-Del	0.829	1
PIK3R1	Amp_Xp11.22	0.829	1
PIK3R1	Del_Xq21.1	0.829	1
PTEN	SPANXE	0.829	1
PTEN	DDX5	0.829	1
PTEN	GAGE2B	0.829	1
PTEN	ROBO3	0.829	1
PTEN	9q-Del	0.829	1
PTEN	Amp_Xp11.22	0.829	1
PTEN	Del_Xq21.1	0.829	1
SMARCA4	SPANXE	0.829	1
SMARCA4	DDX5	0.829	1
SMARCA4	GAGE2B	0.829	1
SMARCA4	PLCG1	0.829	1
SMARCA4	9q-Del	0.829	1
SMARCA4	Amp_Xp11.22	0.829	1
SMARCA4	Del_Xq21.1	0.829	1
SPANXE	8q-Amp	0.829	1
ZBTB20	DDX5	0.829	1
ZBTB20	PLCG1	0.829	1
ZBTB20	ROBO3	0.829	1
ZBTB20	9q-Del	0.829	1
ZBTB20	Amp_Xp11.22	0.829	1
ZBTB20	Del_Xq21.1	0.829	1
DDX5	8q-Amp	0.829	1
DDX5	Amp_19p13.3	0.829	1
GAGE2B	8q-Amp	0.829	1
GAGE2B	Amp_19p13.3	0.829	1
PLCG1	8q-Amp	0.829	1
PLCG1	Amp_19p13.3	0.829	1
ROBO3	8q-Amp	0.829	1
ROBO3	Amp_19p13.3	0.829	1
8q-Amp	9q-Del	0.829	1
8q-Amp	Del_Xq21.1	0.829	1
9q-Del	Amp_19p13.3	0.829	1
Amp_19p13.3	Amp_Xp11.22	0.829	1
Amp_19p13.3	Del_Xq21.1	0.829	1
Del_6q22.31	Del_11p15.1	0.829	1
Amp_12q14.1	Del_11p15.5	0.83	1
Del_9p23	Del_18q23	0.83	1
ATRX	DYNC1I1	0.831	1
ATRX	F13A1	0.831	1
ATRX	TNFRSF9	0.831	1
MYH2	6q-Del	0.831	1
OR5D18	Del_19q13.42	0.831	1
TP53	13q-Del	0.831	1
10p-Del	Amp_13q34	0.831	1
10p-Del	Del_3q13.31	0.831	1
13q-Del	Amp_17q25.1	0.831	1
6q-Del	Amp_17q25.1	0.831	1
Amp_8q24.13	Del_3q13.31	0.831	1
Amp_13q34	Del_6q22.31	0.831	1
BRAF	EGFR	0.832	1
BRAF	PCDHAC2	0.832	1
BRAF	18p-Del	0.832	1
EGFR	NKX2-1	0.832	1
EGFR	TMEM216	0.832	1
EGFR	ZNF709	0.832	1
EGFR	TRERF1	0.832	1
EGFR	Del_1q43	0.832	1
HTRA2	Del_19q13.41	0.832	1
NKX2-1	PCDHAC2	0.832	1
NKX2-1	18p-Del	0.832	1
TMEM216	PCDHAC2	0.832	1
TMEM216	18p-Del	0.832	1
ZNF709	PCDHAC2	0.832	1
ZNF709	18p-Del	0.832	1
PCDHAC2	TRERF1	0.832	1
PCDHAC2	Del_1q43	0.832	1
DDX5	Del_19q13.41	0.832	1
GAGE2B	Del_19q13.41	0.832	1
ROBO3	Del_19q13.41	0.832	1
TRERF1	18p-Del	0.832	1
18p-Del	Del_1q43	0.832	1
Amp_Xp11.22	Del_19q13.41	0.832	1
DYNC1I1	PIK3CA	0.833	1
DYNC1I1	Amp_12p13.32	0.833	1
DYNC1I1	Del_2q37.3	0.833	1
F13A1	PIK3CA	0.833	1
F13A1	Amp_12p13.32	0.833	1
F13A1	Del_2q37.3	0.833	1
NF1	Del_1p32.3	0.833	1
OR5D18	PIK3CA	0.833	1
OR5D18	Amp_12p13.32	0.833	1
OR5D18	Del_2q37.3	0.833	1
PIK3CA	PRCP	0.833	1
PIK3CA	TNFRSF9	0.833	1
PRCP	Amp_12p13.32	0.833	1
PRCP	Del_2q37.3	0.833	1
TNFRSF9	Amp_12p13.32	0.833	1
TNFRSF9	Del_2q37.3	0.833	1
7p-Amp	Amp_19p13.3	0.833	1
Del_18q23	Del_19q13.41	0.836	1
CIC	HTRA2	0.837	1
CIC	OR5T3	0.837	1
CIC	SPANXE	0.837	1
CIC	ROBO3	0.837	1
9p-Del	Del_11p15.1	0.837	1
FSTL5	19q-Del	0.838	1
STK19	Del_9p23	0.838	1
STK19	Del_10q26.3	0.838	1
VAV3	Del_10q26.3	0.838	1
12q-Del	Del_9p23	0.838	1
12q-Del	Del_10q26.3	0.838	1
15q-Del	Del_9p23	0.838	1
19q-Del	Del_7p22.3	0.838	1
4q-Del	Del_12q12	0.838	1
Amp_19p13.2	Del_9p23	0.838	1
Del_6p25.3	Del_12q12	0.838	1
Del_8q24.3	Del_9p23	0.838	1
Del_8q24.3	Del_10q26.3	0.838	1
ARID1A	NF1	0.839	1
DYNC1I1	13q-Del	0.839	1
DYNC1I1	6q-Del	0.839	1
EGFR	6q-Del	0.839	1
F13A1	13q-Del	0.839	1
F13A1	6q-Del	0.839	1
NF1	10p-Amp	0.839	1
OR5D18	13q-Del	0.839	1
OR5D18	6q-Del	0.839	1
PRCP	13q-Del	0.839	1
SLC6A3	FAM47C	0.839	1
SLC6A3	Amp_13q34	0.839	1
SLC6A3	Del_3q13.31	0.839	1
TNFRSF9	13q-Del	0.839	1
TNFRSF9	6q-Del	0.839	1
PCDHAC2	13q-Del	0.839	1
FAM47C	Amp_4q12	0.839	1
FAM47C	Amp_13q34	0.839	1
FAM47C	Del_3q13.31	0.839	1
10p-Amp	22q-Del	0.839	1
10p-Amp	Amp_11q24.1	0.839	1
13q-Del	18p-Del	0.839	1
18p-Del	6q-Del	0.839	1
22q-Del	4p-Del	0.839	1
4p-Del	Amp_11q24.1	0.839	1
6q-Del	Del_18q23	0.839	1
Amp_4q12	Amp_13q34	0.839	1
Amp_13q34	Del_3q13.31	0.839	1
NF1	Amp_7p11.2	0.84	1
7q-Amp	22q-Del	0.84	1
10p-Del	Del_13q14.2	0.84	1
Amp_10p15.3	Del_9p23	0.84	1
Amp_10p15.3	Del_10q26.3	0.84	1
Del_5p15.33	Del_6q24.3	0.84	1
PDGFRA	Del_11p15.5	0.841	1
PDGFRA	Del_13q14.2	0.841	1
Amp_1q22	Del_13q14.2	0.841	1
EIF1AX	IDH2	0.842	1
EIF1AX	Amp_12q14.1	0.842	1
EIF1AX	Del_5p15.33	0.842	1
FUBP1	TCF12	0.842	1
HTRA2	Amp_12q14.1	0.842	1
HTRA2	Del_5p15.33	0.842	1
IDH2	OR5T3	0.842	1
IDH2	SPANXE	0.842	1
IDH2	DDX5	0.842	1
IDH2	PLCG1	0.842	1
IDH2	ROBO3	0.842	1
IDH2	9q-Del	0.842	1
IDH2	Amp_Xp11.22	0.842	1
IDH2	Del_Xq21.1	0.842	1
MYH2	11p-Del	0.842	1
OR5T3	Amp_12q14.1	0.842	1
OR5T3	Del_5p15.33	0.842	1
PDGFRA	STK19	0.842	1
PDGFRA	TCF12	0.842	1
PDGFRA	VAV3	0.842	1
PDGFRA	15q-Del	0.842	1
PDGFRA	Amp_1q32.1	0.842	1
PDGFRA	Amp_3q26.33	0.842	1
PDGFRA	Amp_19p13.2	0.842	1
PDGFRA	Del_3q29	0.842	1
PDGFRA	Del_8q24.3	0.842	1
PTPN11	Del_1p32.3	0.842	1
SPANXE	Amp_12q14.1	0.842	1
STK19	Amp_1q22	0.842	1
STK19	Del_5q34	0.842	1
TCF12	Amp_1q22	0.842	1
TCF12	Del_5q34	0.842	1
TCF12	Del_18q23	0.842	1
VAV3	Amp_1q22	0.842	1
VAV3	Del_5q34	0.842	1
VAV3	Del_18q23	0.842	1
VAV3	Del_19q13.41	0.842	1
DDX5	Amp_12q14.1	0.842	1
GAGE2B	Amp_12q14.1	0.842	1
GAGE2B	Del_5p15.33	0.842	1
PLCG1	Del_5p15.33	0.842	1
ROBO3	Amp_12q14.1	0.842	1
ROBO3	Del_5p15.33	0.842	1
11p-Del	Amp_17q25.1	0.842	1
12q-Del	Amp_1q22	0.842	1
14q-Del	Amp_17q25.1	0.842	1
15q-Del	Amp_1q22	0.842	1
15q-Del	Del_5q34	0.842	1
9q-Del	Amp_12q14.1	0.842	1
9q-Del	Del_5p15.33	0.842	1
Amp_1q22	Amp_19p13.2	0.842	1
Amp_1q32.1	Del_5q34	0.842	1
Amp_2p24.3	Del_14q24.3	0.842	1
Amp_3q26.33	Del_5q34	0.842	1
Amp_12q14.1	Amp_Xp11.22	0.842	1
Amp_19p13.2	Del_5q34	0.842	1
Amp_19p13.2	Del_18q23	0.842	1
Del_5p15.33	Del_Xq21.1	0.842	1
Del_5q34	Del_8q24.3	0.842	1
Del_7p22.3	Del_14q24.3	0.842	1
HSPB8	7q-Amp	0.843	1
HSPB8	Amp_7p11.2	0.843	1
PRNP	7q-Amp	0.843	1
PRNP	Amp_7p11.2	0.843	1
UBE2G2	7q-Amp	0.843	1
UBE2G2	Amp_7p11.2	0.843	1
ATRX	Del_9p21.3	0.844	1
PIK3R1	Del_6q22.31	0.844	1
SMARCA4	Amp_8q24.13	0.844	1
DYNC1I1	11p-Del	0.845	1
DYNC1I1	14q-Del	0.845	1
F13A1	11p-Del	0.845	1
F13A1	14q-Del	0.845	1
OR5D18	11p-Del	0.845	1
OR5D18	14q-Del	0.845	1
PRCP	11p-Del	0.845	1
STK19	TP53	0.845	1
TNFRSF9	11p-Del	0.845	1
TNFRSF9	14q-Del	0.845	1
TP53	VAV3	0.845	1
15q-Del	Amp_7q31.2	0.845	1
Amp_7q31.2	Del_3q29	0.845	1
Amp_7q31.2	Del_8q24.3	0.845	1
EGFR	Del_5p15.33	0.846	1
IDH2	18p-Del	0.846	1
MYH2	7q-Amp	0.846	1
MYH2	Amp_7p11.2	0.846	1
BCOR	7q-Amp	0.846	1
BCOR	Amp_7p11.2	0.846	1
PCDHAC2	Del_5p15.33	0.846	1
7q-Amp	Amp_17q25.1	0.846	1
13q-Del	Del_1p36.32	0.846	1
18p-Del	Del_5p15.33	0.846	1
Amp_7p11.2	Amp_17q25.1	0.846	1
Amp_10p15.3	Amp_11q24.1	0.846	1
OR5D18	Del_19q13.41	0.847	1
Amp_11q24.1	Del_9p21.3	0.847	1
Amp_17q25.1	Del_9p21.3	0.847	1
Del_9p21.3	Del_18q23	0.847	1
ATRX	Amp_7q32.3	0.848	1
HTRA2	Del_9p23	0.848	1
OR5T3	Del_10q26.3	0.848	1
SPANXE	Del_9p23	0.848	1
SPANXE	Del_10q26.3	0.848	1
DDX5	Del_9p23	0.848	1
GAGE2B	Del_9p23	0.848	1
ROBO3	Del_9p23	0.848	1
Amp_Xp11.22	Del_9p23	0.848	1
Amp_Xp11.22	Del_10q26.3	0.848	1
Del_5q34	Del_6q24.3	0.848	1
Del_9p23	Del_Xq21.1	0.848	1
NOTCH1	Amp_4q12	0.849	1
BRAF	18q-Del	0.85	1
BRAF	4q-Del	0.85	1
NKX2-1	18q-Del	0.85	1
NKX2-1	4q-Del	0.85	1
NKX2-1	Del_6p25.3	0.85	1
TMEM216	18q-Del	0.85	1
TMEM216	Del_6p25.3	0.85	1
ZNF709	18q-Del	0.85	1
ZNF709	4q-Del	0.85	1
ZNF709	Del_6p25.3	0.85	1
TRERF1	18q-Del	0.85	1
TRERF1	4q-Del	0.85	1
TRERF1	Del_6p25.3	0.85	1
18q-Del	Del_1q43	0.85	1
4q-Del	Del_1q43	0.85	1
Del_1q43	Del_6p25.3	0.85	1
BRAF	Del_9p21.3	0.851	1
CREBZF	Amp_17q25.1	0.851	1
FSTL5	MYH2	0.851	1
FSTL5	Amp_17q25.1	0.851	1
LRRC37A2	MYH2	0.851	1
LRRC37A2	BCOR	0.851	1
LRRC37A2	Amp_17q25.1	0.851	1
MYH2	PTPN11	0.851	1
MYH2	IRS4	0.851	1
MYH2	Xq-Del	0.851	1
MYH2	Amp_2p24.3	0.851	1
MYH2	Del_7p22.3	0.851	1
NF1	7p-Amp	0.851	1
NOTCH1	7q-Amp	0.851	1
PTPN11	BCOR	0.851	1
PTPN11	Amp_17q25.1	0.851	1
TMEM216	Del_9p21.3	0.851	1
ZNF709	Del_9p21.3	0.851	1
BCOR	IRS4	0.851	1
BCOR	19p-Amp	0.851	1
BCOR	Xq-Del	0.851	1
BCOR	Amp_2p24.3	0.851	1
BCOR	Del_7p22.3	0.851	1
IRS4	Amp_17q25.1	0.851	1
19p-Amp	Amp_17q25.1	0.851	1
7p-Amp	Amp_11q24.1	0.851	1
22q-Del	Del_4q34.3	0.851	1
Xq-Del	Amp_17q25.1	0.851	1
Amp_2p24.3	Amp_17q25.1	0.851	1
Amp_11q24.1	Del_4q34.3	0.851	1
ATRX	Del_6q22.31	0.852	1
PIK3CA	TCF12	0.852	1
PIK3CA	12q-Del	0.852	1
PIK3CA	15q-Del	0.852	1
TCF12	Del_2q37.3	0.852	1
11q-Amp	Amp_7q32.3	0.852	1
12q-Del	Del_2q37.3	0.852	1
15q-Del	Del_2q37.3	0.852	1
Amp_3q26.33	Amp_12p13.32	0.852	1
Amp_3q26.33	Del_2q37.3	0.852	1
EIF1AX	Amp_7q31.2	0.853	1
HSPB8	Del_14q24.3	0.853	1
OR5T3	Amp_7q31.2	0.853	1
PRNP	Del_14q24.3	0.853	1
UBE2G2	Del_14q24.3	0.853	1
PCDHAC2	14q-Del	0.853	1
DDX5	Amp_7q31.2	0.853	1
GAGE2B	Amp_7q31.2	0.853	1
PLCG1	Amp_7q31.2	0.853	1
Amp_7q31.2	Del_5p15.33	0.853	1
ARID1A	EIF1AX	0.854	1
ARID1A	HTRA2	0.854	1
ARID1A	OR5T3	0.854	1
ARID1A	SPANXE	0.854	1
ARID1A	DDX5	0.854	1
ARID1A	GAGE2B	0.854	1
ARID1A	PLCG1	0.854	1
ARID1A	ROBO3	0.854	1
ARID1A	9q-Del	0.854	1
ARID1A	Amp_Xp11.22	0.854	1
ARID1A	Del_Xq21.1	0.854	1
EIF1AX	10p-Amp	0.854	1
EIF1AX	4p-Del	0.854	1
HTRA2	10p-Amp	0.854	1
HTRA2	11q-Amp	0.854	1
IDH1	SLC6A3	0.854	1
IDH1	FAM47C	0.854	1
IDH1	Amp_4q12	0.854	1
OR5T3	10p-Amp	0.854	1
OR5T3	11q-Amp	0.854	1
OR5T3	4p-Del	0.854	1
SPANXE	10p-Amp	0.854	1
SPANXE	11q-Amp	0.854	1
DDX5	10p-Amp	0.854	1
DDX5	11q-Amp	0.854	1
DDX5	4p-Del	0.854	1
GAGE2B	10p-Amp	0.854	1
GAGE2B	11q-Amp	0.854	1
GAGE2B	4p-Del	0.854	1
PLCG1	10p-Amp	0.854	1
PLCG1	11q-Amp	0.854	1
PLCG1	4p-Del	0.854	1
ROBO3	11q-Amp	0.854	1
ROBO3	4p-Del	0.854	1
10p-Amp	9q-Del	0.854	1
10p-Amp	Amp_Xp11.22	0.854	1
10p-Amp	Del_Xq21.1	0.854	1
11q-Amp	9q-Del	0.854	1
11q-Amp	Amp_Xp11.22	0.854	1
11q-Amp	Del_Xq21.1	0.854	1
4p-Del	9q-Del	0.854	1
4p-Del	Del_Xq21.1	0.854	1
Amp_7q32.3	Del_4q34.3	0.854	1
FUBP1	18q-Del	0.855	1
FUBP1	4q-Del	0.855	1
13q-Del	Amp_12p13.32	0.856	1
1p-Del	Del_4q34.3	0.856	1
PIK3R1	Del_6p25.3	0.857	1
PTEN	18q-Del	0.857	1
SMARCA4	18q-Del	0.857	1
ZBTB20	18q-Del	0.857	1
ZBTB20	4q-Del	0.857	1
ZBTB20	Del_6p25.3	0.857	1
FAM47C	Del_11p15.1	0.857	1
8q-Amp	4q-Del	0.857	1
8q-Amp	Del_6p25.3	0.857	1
18q-Del	Amp_19p13.3	0.857	1
4q-Del	Amp_19p13.3	0.857	1
DYNC1I1	Amp_10p15.3	0.858	1
F13A1	Amp_10p15.3	0.858	1
IDH1	ZBTB20	0.858	1
IDH1	8q-Amp	0.858	1
OR5D18	Amp_10p15.3	0.858	1
PRCP	Amp_10p15.3	0.858	1
TNFRSF9	Amp_10p15.3	0.858	1
BRAF	Del_3p21.31	0.86	1
BRAF	Del_12q12	0.86	1
EGFR	Del_13q14.2	0.86	1
NKX2-1	Del_3p21.31	0.86	1
NKX2-1	Del_12q12	0.86	1
TMEM216	Del_3p21.31	0.86	1
ZNF709	Del_3p21.31	0.86	1
ZNF709	Del_12q12	0.86	1
PCDHAC2	Del_13q14.2	0.86	1
TRERF1	Del_3p21.31	0.86	1
TRERF1	Del_12q12	0.86	1
13q-Del	Del_6q24.3	0.86	1
18p-Del	Del_13q14.2	0.86	1
9p-Del	Amp_10p15.3	0.86	1
Del_1q43	Del_3p21.31	0.86	1
Del_1q43	Del_12q12	0.86	1
ATRX	Amp_7q31.2	0.861	1
CREBZF	9p-Del	0.861	1
FSTL5	9p-Del	0.861	1
LRRC37A2	9p-Del	0.861	1
PDGFRA	FAM47C	0.861	1
PDGFRA	Amp_13q34	0.861	1
PTPN11	9p-Del	0.861	1
SLC6A3	Amp_1q22	0.861	1
SLC6A3	Del_5q34	0.861	1
FAM47C	Amp_1q22	0.861	1
FAM47C	Del_5q34	0.861	1
IRS4	9p-Del	0.861	1
10p-Amp	Del_13q14.2	0.861	1
11q-Amp	Del_11p15.5	0.861	1
4p-Del	Del_11p15.5	0.861	1
Amp_1q22	Amp_4q12	0.861	1
Amp_1q22	Amp_13q34	0.861	1
Amp_1q22	Del_3q13.31	0.861	1
Del_4q34.3	Del_5p15.33	0.861	1
STK19	13q-Del	0.862	1
VAV3	13q-Del	0.862	1
12q-Del	13q-Del	0.862	1
12q-Del	6q-Del	0.862	1
13q-Del	15q-Del	0.862	1
13q-Del	Amp_3q26.33	0.862	1
6q-Del	Amp_1q32.1	0.862	1
PDGFRA	10q-Del	0.863	1
PDGFRA	Del_4q34.3	0.863	1
7p-Amp	Amp_1q22	0.863	1
HSPB8	9p-Del	0.864	1
PRNP	9p-Del	0.864	1
UBE2G2	9p-Del	0.864	1
NOTCH1	SMARCA4	0.866	1
NOTCH1	ZBTB20	0.866	1
NOTCH1	Amp_19p13.3	0.866	1
Del_6q22.31	Del_18q23	0.866	1
ARID1A	CIC	0.867	1
ARID1A	EGFR	0.867	1
ARID1A	PCDHAC2	0.867	1
CREBZF	STK19	0.867	1
CREBZF	TCF12	0.867	1
CREBZF	12q-Del	0.867	1
CREBZF	15q-Del	0.867	1
CREBZF	Amp_1q32.1	0.867	1
CREBZF	Amp_3q26.33	0.867	1
CREBZF	Amp_19p13.2	0.867	1
CREBZF	Del_3q29	0.867	1
CREBZF	Del_8q24.3	0.867	1
EGFR	4p-Del	0.867	1
FSTL5	STK19	0.867	1
FSTL5	TCF12	0.867	1
FSTL5	VAV3	0.867	1
FSTL5	12q-Del	0.867	1
FSTL5	15q-Del	0.867	1
FSTL5	Amp_1q32.1	0.867	1
FSTL5	Amp_3q26.33	0.867	1
FSTL5	Amp_19p13.2	0.867	1
FSTL5	Del_3q29	0.867	1
FSTL5	Del_8q24.3	0.867	1
LRRC37A2	STK19	0.867	1
LRRC37A2	VAV3	0.867	1
LRRC37A2	12q-Del	0.867	1
LRRC37A2	Amp_1q32.1	0.867	1
LRRC37A2	Amp_3q26.33	0.867	1
LRRC37A2	Amp_19p13.2	0.867	1
LRRC37A2	Del_3q29	0.867	1
LRRC37A2	Del_8q24.3	0.867	1
PTPN11	STK19	0.867	1
PTPN11	TCF12	0.867	1
PTPN11	VAV3	0.867	1
PTPN11	12q-Del	0.867	1
PTPN11	15q-Del	0.867	1
PTPN11	Amp_19p13.2	0.867	1
PTPN11	Del_3q29	0.867	1
PTPN11	Del_8q24.3	0.867	1
STK19	IRS4	0.867	1
STK19	Xq-Del	0.867	1
TCF12	IRS4	0.867	1
TCF12	19p-Amp	0.867	1
TCF12	Xq-Del	0.867	1
TCF12	Amp_2p24.3	0.867	1
TCF12	Del_7p22.3	0.867	1
VAV3	IRS4	0.867	1
VAV3	19p-Amp	0.867	1
VAV3	Xq-Del	0.867	1
VAV3	Del_7p22.3	0.867	1
PCDHAC2	10p-Amp	0.867	1
PCDHAC2	4p-Del	0.867	1
IRS4	12q-Del	0.867	1
IRS4	15q-Del	0.867	1
IRS4	Amp_1q32.1	0.867	1
IRS4	Amp_19p13.2	0.867	1
IRS4	Del_3q29	0.867	1
10p-Amp	18p-Del	0.867	1
19p-Amp	12q-Del	0.867	1
19p-Amp	Del_3q29	0.867	1
19p-Amp	Del_8q24.3	0.867	1
12q-Del	Xq-Del	0.867	1
12q-Del	Amp_2p24.3	0.867	1
12q-Del	Del_7p22.3	0.867	1
15q-Del	Xq-Del	0.867	1
15q-Del	Amp_2p24.3	0.867	1
15q-Del	Del_7p22.3	0.867	1
18p-Del	4p-Del	0.867	1
Xq-Del	Amp_3q26.33	0.867	1
Xq-Del	Amp_19p13.2	0.867	1
Amp_1q32.1	Amp_2p24.3	0.867	1
Amp_1q32.1	Del_7p22.3	0.867	1
Amp_2p24.3	Amp_3q26.33	0.867	1
Amp_2p24.3	Amp_19p13.2	0.867	1
Amp_2p24.3	Del_3q29	0.867	1
Amp_2p24.3	Del_8q24.3	0.867	1
Amp_3q26.33	Del_7p22.3	0.867	1
Amp_19p13.2	Del_7p22.3	0.867	1
NKX2-1	TP53	0.868	1
TMEM216	TP53	0.868	1
TP53	Del_1q43	0.868	1
BRAF	PIK3R1	0.869	1
BRAF	SMARCA4	0.869	1
BRAF	ZBTB20	0.869	1
BRAF	8q-Amp	0.869	1
BRAF	Amp_19p13.3	0.869	1
CIC	18q-Del	0.869	1
NKX2-1	PIK3R1	0.869	1
NKX2-1	PTEN	0.869	1
NKX2-1	SMARCA4	0.869	1
NKX2-1	ZBTB20	0.869	1
NKX2-1	8q-Amp	0.869	1
NKX2-1	Amp_19p13.3	0.869	1
PIK3CA	7p-Amp	0.869	1
PIK3R1	TMEM216	0.869	1
PIK3R1	ZNF709	0.869	1
PIK3R1	TRERF1	0.869	1
PIK3R1	Del_1q43	0.869	1
PTEN	TMEM216	0.869	1
PTEN	ZNF709	0.869	1
PTEN	TRERF1	0.869	1
PTEN	Del_1q43	0.869	1
SMARCA4	TMEM216	0.869	1
SMARCA4	ZNF709	0.869	1
SMARCA4	TRERF1	0.869	1
TMEM216	ZBTB20	0.869	1
TMEM216	8q-Amp	0.869	1
TMEM216	Amp_19p13.3	0.869	1
ZBTB20	TRERF1	0.869	1
ZBTB20	Del_1q43	0.869	1
ZNF709	8q-Amp	0.869	1
ZNF709	Amp_19p13.3	0.869	1
TRERF1	8q-Amp	0.869	1
TRERF1	Amp_19p13.3	0.869	1
7p-Amp	Del_2q37.3	0.869	1
8q-Amp	Del_1q43	0.869	1
Amp_19p13.3	Del_1q43	0.869	1
Amp_7p11.2	Amp_19p13.3	0.87	1
DYNC1I1	NF1	0.871	1
DYNC1I1	Amp_11q24.1	0.871	1
EGFR	Del_6q24.3	0.871	1
F13A1	NF1	0.871	1
F13A1	22q-Del	0.871	1
F13A1	Amp_11q24.1	0.871	1
NF1	OR5D18	0.871	1
OR5D18	22q-Del	0.871	1
OR5D18	Amp_11q24.1	0.871	1
PDGFRA	10p-Del	0.871	1
PRCP	22q-Del	0.871	1
PRCP	Amp_11q24.1	0.871	1
SLC6A3	Del_1p36.32	0.871	1
TCF12	11p-Del	0.871	1
TCF12	14q-Del	0.871	1
TNFRSF9	22q-Del	0.871	1
TNFRSF9	Amp_11q24.1	0.871	1
7p-Amp	Del_4q34.3	0.871	1
11p-Del	Amp_3q26.33	0.871	1
11p-Del	Del_8q24.3	0.871	1
12q-Del	14q-Del	0.871	1
13q-Del	6q-Del	0.871	1
14q-Del	Amp_1q32.1	0.871	1
14q-Del	Del_3q29	0.871	1
18p-Del	Del_6q24.3	0.871	1
Amp_1q22	Amp_8q24.13	0.871	1
Amp_1q22	Del_6q22.31	0.871	1
Del_5p15.33	Del_6q22.31	0.871	1
Del_5q34	Del_6q22.31	0.871	1
PIK3R1	Del_3p21.31	0.873	1
PIK3R1	Del_12q12	0.873	1
PTEN	Del_3p21.31	0.873	1
SMARCA4	Del_3p21.31	0.873	1
8q-Amp	Del_3p21.31	0.873	1
8q-Amp	Del_12q12	0.873	1
Amp_19p13.3	Del_3p21.31	0.873	1
Amp_4q12	Del_18q23	0.874	1
Del_3q13.31	Del_18q23	0.874	1
IDH2	18q-Del	0.875	1
18q-Del	Amp_12q14.1	0.875	1
4q-Del	Amp_12q14.1	0.875	1
Amp_12q14.1	Del_6p25.3	0.875	1
Del_5p15.33	Del_6p25.3	0.875	1
SLC6A3	19q-Del	0.876	1
7p-Amp	9p-Del	0.876	1
9p-Del	Del_4q34.3	0.876	1
Del_3p21.31	Del_18q23	0.876	1
TP53	11q-Amp	0.877	1
8q-Amp	Del_22q13.31	0.877	1
HSPB8	Del_11p15.5	0.878	1
HSPB8	Del_13q14.2	0.878	1
PRNP	Del_11p15.5	0.878	1
PRNP	Del_13q14.2	0.878	1
UBE2G2	Del_11p15.5	0.878	1
UBE2G2	Del_13q14.2	0.878	1
BRAF	IDH2	0.879	1
BRAF	Amp_12q14.1	0.879	1
BRAF	Del_5p15.33	0.879	1
EIF1AX	MYH2	0.879	1
EIF1AX	BCOR	0.879	1
HTRA2	MYH2	0.879	1
HTRA2	BCOR	0.879	1
HTRA2	Amp_17q25.1	0.879	1
IDH2	NKX2-1	0.879	1
IDH2	ZNF709	0.879	1
IDH2	TRERF1	0.879	1
IDH2	Del_1q43	0.879	1
MYH2	OR5T3	0.879	1
MYH2	SPANXE	0.879	1
MYH2	DDX5	0.879	1
MYH2	GAGE2B	0.879	1
MYH2	PLCG1	0.879	1
MYH2	ROBO3	0.879	1
MYH2	9q-Del	0.879	1
MYH2	Amp_Xp11.22	0.879	1
MYH2	Del_Xq21.1	0.879	1
NKX2-1	Amp_12q14.1	0.879	1
NKX2-1	Del_5p15.33	0.879	1
OR5T3	BCOR	0.879	1
OR5T3	Amp_17q25.1	0.879	1
SPANXE	BCOR	0.879	1
SPANXE	Amp_17q25.1	0.879	1
TMEM216	Amp_12q14.1	0.879	1
TMEM216	Del_5p15.33	0.879	1
ZNF709	Amp_12q14.1	0.879	1
ZNF709	Del_5p15.33	0.879	1
BCOR	DDX5	0.879	1
BCOR	GAGE2B	0.879	1
BCOR	PLCG1	0.879	1
BCOR	ROBO3	0.879	1
BCOR	9q-Del	0.879	1
BCOR	Amp_Xp11.22	0.879	1
BCOR	Del_Xq21.1	0.879	1
DDX5	Amp_17q25.1	0.879	1
GAGE2B	Amp_17q25.1	0.879	1
PLCG1	Amp_17q25.1	0.879	1
ROBO3	Amp_17q25.1	0.879	1
TRERF1	Amp_12q14.1	0.879	1
TRERF1	Del_5p15.33	0.879	1
13q-Del	18q-Del	0.879	1
18q-Del	6q-Del	0.879	1
19q-Del	Del_4q34.3	0.879	1
9q-Del	Amp_17q25.1	0.879	1
Amp_12q14.1	Del_1q43	0.879	1
Amp_17q25.1	Amp_Xp11.22	0.879	1
Del_1q43	Del_5p15.33	0.879	1
PDGFRA	Amp_1q22	0.88	1
PDGFRA	Del_5q34	0.88	1
SLC6A3	Del_1p32.3	0.88	1
13q-Del	Del_14q24.3	0.88	1
Amp_1q22	Del_5q34	0.88	1
HSPB8	Del_6q24.3	0.881	1
NOTCH1	Amp_7q31.2	0.881	1
PRNP	Del_6q24.3	0.881	1
UBE2G2	Del_6q24.3	0.881	1
4p-Del	Del_9p23	0.881	1
EIF1AX	7q-Amp	0.882	1
HTRA2	7q-Amp	0.882	1
HTRA2	Amp_7p11.2	0.882	1
OR5T3	7q-Amp	0.882	1
OR5T3	Amp_7p11.2	0.882	1
DDX5	7q-Amp	0.882	1
GAGE2B	7q-Amp	0.882	1
PLCG1	7q-Amp	0.882	1
ATRX	9p-Del	0.883	1
CREBZF	SLC6A3	0.883	1
CREBZF	FAM47C	0.883	1
CREBZF	Amp_13q34	0.883	1
CREBZF	Del_3q13.31	0.883	1
FSTL5	SLC6A3	0.883	1
FSTL5	FAM47C	0.883	1
FSTL5	Amp_4q12	0.883	1
FSTL5	Amp_13q34	0.883	1
LRRC37A2	SLC6A3	0.883	1
LRRC37A2	FAM47C	0.883	1
LRRC37A2	Amp_4q12	0.883	1
LRRC37A2	Amp_13q34	0.883	1
LRRC37A2	Del_3q13.31	0.883	1
PIK3CA	SLC6A3	0.883	1
PIK3CA	Amp_4q12	0.883	1
PIK3CA	Amp_13q34	0.883	1
PTPN11	SLC6A3	0.883	1
PTPN11	FAM47C	0.883	1
PTPN11	Amp_4q12	0.883	1
PTPN11	Amp_13q34	0.883	1
PTPN11	Del_3q13.31	0.883	1
SLC6A3	19p-Amp	0.883	1
SLC6A3	Xq-Del	0.883	1
SLC6A3	Amp_2p24.3	0.883	1
SLC6A3	Del_2q37.3	0.883	1
SLC6A3	Del_7p22.3	0.883	1
TP53	Amp_1q22	0.883	1
FAM47C	IRS4	0.883	1
FAM47C	19p-Amp	0.883	1
FAM47C	Xq-Del	0.883	1
FAM47C	Amp_2p24.3	0.883	1
FAM47C	Del_7p22.3	0.883	1
IRS4	Amp_4q12	0.883	1
IRS4	Amp_13q34	0.883	1
IRS4	Del_3q13.31	0.883	1
19p-Amp	Amp_4q12	0.883	1
19p-Amp	Amp_13q34	0.883	1
19p-Amp	Del_3q13.31	0.883	1
Xq-Del	Amp_4q12	0.883	1
Xq-Del	Amp_13q34	0.883	1
Amp_2p24.3	Amp_4q12	0.883	1
Amp_2p24.3	Amp_13q34	0.883	1
Amp_2p24.3	Del_3q13.31	0.883	1
Amp_4q12	Del_7p22.3	0.883	1
Amp_12p13.32	Del_3q13.31	0.883	1
Amp_13q34	Del_2q37.3	0.883	1
Amp_13q34	Del_7p22.3	0.883	1
Del_6q24.3	Del_19q13.41	0.883	1
Del_13q14.2	Del_14q24.3	0.883	1
DYNC1I1	EGFR	0.884	1
DYNC1I1	PCDHAC2	0.884	1
DYNC1I1	18p-Del	0.884	1
EGFR	F13A1	0.884	1
EGFR	OR5D18	0.884	1
EGFR	PRCP	0.884	1
EGFR	TNFRSF9	0.884	1
F13A1	PCDHAC2	0.884	1
OR5D18	PCDHAC2	0.884	1
OR5D18	18p-Del	0.884	1
TNFRSF9	18p-Del	0.884	1
Amp_4q12	Del_9p23	0.884	1
Amp_4q12	Del_10q26.3	0.884	1
CREBZF	Del_13q14.2	0.885	1
LRRC37A2	Del_13q14.2	0.885	1
PTPN11	Del_13q14.2	0.885	1
STK19	Amp_7p11.2	0.885	1
IRS4	Del_11p15.5	0.885	1
7q-Amp	15q-Del	0.885	1
7q-Amp	Del_3q29	0.885	1
7q-Amp	Del_8q24.3	0.885	1
Xq-Del	Del_11p15.5	0.885	1
Amp_2p24.3	Del_11p15.5	0.885	1
Amp_2p24.3	Del_13q14.2	0.885	1
Amp_7p11.2	Del_8q24.3	0.885	1
Del_7p22.3	Del_11p15.5	0.885	1
MYH2	22q-Del	0.886	1
NF1	Amp_17q25.1	0.886	1
10q-Del	13q-Del	0.886	1
13q-Del	14q-Del	0.886	1
ARID1A	Del_4q34.3	0.887	1
Amp_12p13.32	Del_12q12	0.887	1
Del_2q37.3	Del_12q12	0.887	1
HSPB8	7p-Amp	0.888	1
HSPB8	10q-Del	0.888	1
HSPB8	Del_4q34.3	0.888	1
PIK3R1	Amp_19p13.3	0.888	1
PRNP	7p-Amp	0.888	1
PRNP	10q-Del	0.888	1
PRNP	Del_4q34.3	0.888	1
SMARCA4	Amp_19p13.3	0.888	1
UBE2G2	7p-Amp	0.888	1
UBE2G2	10q-Del	0.888	1
UBE2G2	Del_4q34.3	0.888	1
11q-Amp	Amp_7q31.2	0.888	1
ARID1A	BRAF	0.889	1
ARID1A	NKX2-1	0.889	1
ARID1A	TMEM216	0.889	1
ARID1A	ZNF709	0.889	1
ARID1A	TRERF1	0.889	1
ARID1A	Del_1q43	0.889	1
ATRX	10p-Amp	0.889	1
BRAF	10p-Amp	0.889	1
BRAF	11q-Amp	0.889	1
BRAF	4p-Del	0.889	1
NKX2-1	10p-Amp	0.889	1
NKX2-1	11q-Amp	0.889	1
NKX2-1	4p-Del	0.889	1
TMEM216	10p-Amp	0.889	1
TMEM216	11q-Amp	0.889	1
ZNF709	10p-Amp	0.889	1
ZNF709	11q-Amp	0.889	1
ZNF709	4p-Del	0.889	1
TRERF1	10p-Amp	0.889	1
TRERF1	11q-Amp	0.889	1
TRERF1	4p-Del	0.889	1
10p-Amp	Del_1q43	0.889	1
11q-Amp	Del_1q43	0.889	1
11q-Amp	Del_19q13.42	0.889	1
4p-Del	Del_1q43	0.889	1
Amp_12q14.1	Del_3p21.31	0.889	1
Amp_12q14.1	Del_12q12	0.889	1
Del_5p15.33	Del_12q12	0.889	1
IDH1	TCF12	0.89	1
IDH1	VAV3	0.89	1
12q-Del	Amp_10p15.3	0.89	1
Amp_3q26.33	Amp_10p15.3	0.89	1
Amp_7q31.2	Amp_13q34	0.89	1
Amp_10p15.3	Del_3q29	0.89	1
Amp_10p15.3	Del_18q23	0.89	1
Del_10q26.3	Del_11p15.1	0.89	1
CREBZF	Del_6q24.3	0.891	1
11p-Del	4q-Del	0.891	1
13q-Del	Amp_4q12	0.891	1
14q-Del	4q-Del	0.891	1
6q-Del	Amp_13q34	0.891	1
6q-Del	Del_3q13.31	0.891	1
Amp_2p24.3	Del_6q24.3	0.891	1
EIF1AX	STK19	0.892	1
EIF1AX	TCF12	0.892	1
EIF1AX	VAV3	0.892	1
EIF1AX	12q-Del	0.892	1
EIF1AX	15q-Del	0.892	1
EIF1AX	Amp_1q32.1	0.892	1
EIF1AX	Amp_3q26.33	0.892	1
EIF1AX	Amp_19p13.2	0.892	1
EIF1AX	Del_3q29	0.892	1
EIF1AX	Del_8q24.3	0.892	1
HSPB8	10p-Del	0.892	1
HSPB8	Amp_8q24.13	0.892	1
HSPB8	Del_6q22.31	0.892	1
HTRA2	TCF12	0.892	1
HTRA2	VAV3	0.892	1
HTRA2	12q-Del	0.892	1
HTRA2	15q-Del	0.892	1
HTRA2	Amp_1q32.1	0.892	1
HTRA2	Amp_3q26.33	0.892	1
HTRA2	Amp_19p13.2	0.892	1
OR5T3	VAV3	0.892	1
OR5T3	15q-Del	0.892	1
OR5T3	Amp_3q26.33	0.892	1
OR5T3	Amp_19p13.2	0.892	1
OR5T3	Del_3q29	0.892	1
OR5T3	Del_8q24.3	0.892	1
PDGFRA	Del_11p15.1	0.892	1
PRNP	10p-Del	0.892	1
PRNP	Amp_8q24.13	0.892	1
PRNP	Del_6q22.31	0.892	1
SPANXE	STK19	0.892	1
SPANXE	TCF12	0.892	1
SPANXE	VAV3	0.892	1
SPANXE	12q-Del	0.892	1
SPANXE	15q-Del	0.892	1
SPANXE	Amp_1q32.1	0.892	1
SPANXE	Amp_3q26.33	0.892	1
SPANXE	Amp_19p13.2	0.892	1
SPANXE	Del_3q29	0.892	1
SPANXE	Del_8q24.3	0.892	1
STK19	DDX5	0.892	1
STK19	GAGE2B	0.892	1
STK19	PLCG1	0.892	1
STK19	9q-Del	0.892	1
STK19	Amp_Xp11.22	0.892	1
STK19	Del_Xq21.1	0.892	1
TCF12	DDX5	0.892	1
TCF12	GAGE2B	0.892	1
TCF12	PLCG1	0.892	1
TCF12	ROBO3	0.892	1
TCF12	Amp_Xp11.22	0.892	1
TCF12	Del_Xq21.1	0.892	1
UBE2G2	10p-Del	0.892	1
UBE2G2	Del_6q22.31	0.892	1
VAV3	DDX5	0.892	1
VAV3	GAGE2B	0.892	1
VAV3	PLCG1	0.892	1
VAV3	ROBO3	0.892	1
VAV3	9q-Del	0.892	1
VAV3	Amp_Xp11.22	0.892	1
VAV3	Del_Xq21.1	0.892	1
PCDHAC2	7p-Amp	0.892	1
DDX5	12q-Del	0.892	1
DDX5	15q-Del	0.892	1
DDX5	Amp_1q32.1	0.892	1
DDX5	Amp_3q26.33	0.892	1
DDX5	Del_3q29	0.892	1
DDX5	Del_8q24.3	0.892	1
GAGE2B	12q-Del	0.892	1
GAGE2B	15q-Del	0.892	1
GAGE2B	Amp_1q32.1	0.892	1
GAGE2B	Amp_3q26.33	0.892	1
GAGE2B	Amp_19p13.2	0.892	1
GAGE2B	Del_3q29	0.892	1
GAGE2B	Del_8q24.3	0.892	1
PLCG1	12q-Del	0.892	1
PLCG1	15q-Del	0.892	1
PLCG1	Amp_19p13.2	0.892	1
PLCG1	Del_3q29	0.892	1
PLCG1	Del_8q24.3	0.892	1
ROBO3	12q-Del	0.892	1
ROBO3	15q-Del	0.892	1
ROBO3	Amp_1q32.1	0.892	1
ROBO3	Amp_19p13.2	0.892	1
ROBO3	Del_3q29	0.892	1
ROBO3	Del_8q24.3	0.892	1
12q-Del	9q-Del	0.892	1
12q-Del	Amp_Xp11.22	0.892	1
12q-Del	Del_Xq21.1	0.892	1
15q-Del	9q-Del	0.892	1
15q-Del	Amp_Xp11.22	0.892	1
15q-Del	Del_Xq21.1	0.892	1
18p-Del	Del_4q34.3	0.892	1
9p-Del	Amp_8q24.13	0.892	1
9q-Del	Amp_1q32.1	0.892	1
9q-Del	Amp_3q26.33	0.892	1
9q-Del	Amp_19p13.2	0.892	1
Amp_1q32.1	Amp_Xp11.22	0.892	1
Amp_1q32.1	Del_Xq21.1	0.892	1
Amp_3q26.33	Amp_Xp11.22	0.892	1
Amp_3q26.33	Del_Xq21.1	0.892	1
Amp_19p13.2	Amp_Xp11.22	0.892	1
Amp_19p13.2	Del_Xq21.1	0.892	1
Amp_Xp11.22	Del_8q24.3	0.892	1
Del_5q34	Del_22q13.31	0.892	1
10p-Amp	Del_6p25.3	0.893	1
11q-Amp	4q-Del	0.893	1
11q-Amp	Del_6p25.3	0.893	1
18q-Del	4p-Del	0.893	1
PIK3R1	Del_14q24.3	0.894	1
OR5T3	Del_14q24.3	0.896	1
SPANXE	Del_14q24.3	0.896	1
STK19	Del_9p21.3	0.896	1
VAV3	Del_9p21.3	0.896	1
ROBO3	Del_14q24.3	0.896	1
12q-Del	Del_9p21.3	0.896	1
15q-Del	Del_9p21.3	0.896	1
4p-Del	Amp_8q24.13	0.896	1
9q-Del	Del_14q24.3	0.896	1
Del_8q24.3	Del_9p21.3	0.896	1
FUBP1	Amp_19p13.3	0.897	1
PTEN	Del_18q23	0.897	1
SMARCA4	Del_18q23	0.897	1
ZBTB20	Del_18q23	0.897	1
Amp_19p13.3	Del_18q23	0.897	1
DYNC1I1	18q-Del	0.898	1
DYNC1I1	4q-Del	0.898	1
DYNC1I1	Del_6p25.3	0.898	1
F13A1	4q-Del	0.898	1
F13A1	Del_6p25.3	0.898	1
OR5D18	18q-Del	0.898	1
OR5D18	4q-Del	0.898	1
OR5D18	Del_6p25.3	0.898	1
PRCP	4q-Del	0.898	1
TNFRSF9	18q-Del	0.898	1
TNFRSF9	4q-Del	0.898	1
TNFRSF9	Del_6p25.3	0.898	1
7q-Amp	Del_5p15.33	0.898	1
13q-Del	Del_6q22.31	0.898	1
4p-Del	Del_9p21.3	0.898	1
6q-Del	Del_3p21.31	0.898	1
6q-Del	Del_12q12	0.898	1
CREBZF	PDGFRA	0.899	1
CREBZF	Amp_1q22	0.899	1
CREBZF	Del_5q34	0.899	1
FSTL5	Amp_1q22	0.899	1
FSTL5	Del_5q34	0.899	1
HSPB8	NOTCH1	0.899	1
LRRC37A2	PDGFRA	0.899	1
LRRC37A2	Amp_1q22	0.899	1
LRRC37A2	Del_5q34	0.899	1
NOTCH1	PRNP	0.899	1
NOTCH1	UBE2G2	0.899	1
PDGFRA	PTPN11	0.899	1
PDGFRA	IRS4	0.899	1
PDGFRA	19p-Amp	0.899	1
PDGFRA	Xq-Del	0.899	1
PDGFRA	Amp_2p24.3	0.899	1
PDGFRA	Del_7p22.3	0.899	1
PTPN11	Amp_1q22	0.899	1
PTPN11	Del_5q34	0.899	1
BCOR	Del_1p36.32	0.899	1
FAM47C	11p-Del	0.899	1
IRS4	Del_5q34	0.899	1
19p-Amp	Amp_1q22	0.899	1
19p-Amp	Del_5q34	0.899	1
11p-Del	Amp_13q34	0.899	1
14q-Del	Amp_4q12	0.899	1
14q-Del	Amp_13q34	0.899	1
Xq-Del	Amp_1q22	0.899	1
Xq-Del	Del_5q34	0.899	1
Amp_1q22	Del_7p22.3	0.899	1
Amp_2p24.3	Del_5q34	0.899	1
Amp_8q24.13	Del_9p21.3	0.899	1
Amp_12q14.1	Del_11p15.1	0.899	1
Amp_12q14.1	Del_22q13.31	0.899	1
Del_5p15.33	Del_22q13.31	0.899	1
Del_5q34	Del_7p22.3	0.899	1
11p-Del	Del_9p23	0.9	1
11p-Del	Del_10q26.3	0.9	1
Del_6q24.3	Del_13q14.2	0.9	1
NF1	9p-Del	0.901	1
NKX2-1	Amp_7q32.3	0.901	1
SLC6A3	1p-Del	0.901	1
TMEM216	Amp_7q32.3	0.901	1
Amp_7q32.3	Del_1q43	0.901	1
EGFR	Del_6q22.31	0.902	1
HSPB8	Del_11p15.1	0.902	1
HSPB8	Del_22q13.31	0.902	1
PRNP	Del_11p15.1	0.902	1
PRNP	Del_22q13.31	0.902	1
UBE2G2	Del_11p15.1	0.902	1
UBE2G2	Del_22q13.31	0.902	1
19p-Amp	Del_4q34.3	0.902	1
7p-Amp	Amp_2p24.3	0.902	1
7p-Amp	Del_7p22.3	0.902	1
10q-Del	Xq-Del	0.902	1
18p-Del	Del_6q22.31	0.902	1
Xq-Del	Del_4q34.3	0.902	1
IDH2	ZBTB20	0.903	1
IDH2	8q-Amp	0.903	1
IDH2	Amp_19p13.3	0.903	1
PTEN	Del_5p15.33	0.903	1
TP53	Amp_17q25.1	0.903	1
ZBTB20	Amp_12q14.1	0.903	1
8q-Amp	Amp_12q14.1	0.903	1
8q-Amp	Del_5p15.33	0.903	1
15q-Del	Del_14q24.3	0.903	1
Amp_1q32.1	Del_14q24.3	0.903	1
Amp_12q14.1	Amp_19p13.3	0.903	1
Del_8q24.3	Del_14q24.3	0.903	1
DYNC1I1	Del_3p21.31	0.904	1
DYNC1I1	Del_12q12	0.904	1
F13A1	Del_3p21.31	0.904	1
F13A1	Del_12q12	0.904	1
OR5D18	Del_3p21.31	0.904	1
PRCP	Del_3p21.31	0.904	1
PRCP	Del_12q12	0.904	1
TNFRSF9	Del_3p21.31	0.904	1
TNFRSF9	Del_12q12	0.904	1
IRS4	Del_9p21.3	0.904	1
18q-Del	Del_13q14.2	0.904	1
Xq-Del	Del_9p21.3	0.904	1
Amp_7p11.2	Del_14q24.3	0.904	1
Del_6p25.3	Del_13q14.2	0.904	1
ARID1A	Del_3p21.31	0.905	1
ATRX	IRS4	0.905	1
EIF1AX	SLC6A3	0.905	1
EIF1AX	FAM47C	0.905	1
EIF1AX	Amp_4q12	0.905	1
EIF1AX	Amp_13q34	0.905	1
EIF1AX	Del_3q13.31	0.905	1
FSTL5	Del_19q13.42	0.905	1
FUBP1	Amp_1q22	0.905	1
HTRA2	SLC6A3	0.905	1
HTRA2	FAM47C	0.905	1
HTRA2	Amp_4q12	0.905	1
HTRA2	Amp_13q34	0.905	1
LRRC37A2	Del_19q13.42	0.905	1
OR5T3	FAM47C	0.905	1
OR5T3	Amp_4q12	0.905	1
OR5T3	Amp_13q34	0.905	1
OR5T3	Del_3q13.31	0.905	1
PDGFRA	Del_18q23	0.905	1
SLC6A3	SPANXE	0.905	1
SLC6A3	DDX5	0.905	1
SLC6A3	GAGE2B	0.905	1
SLC6A3	PLCG1	0.905	1
SLC6A3	ROBO3	0.905	1
SLC6A3	9q-Del	0.905	1
SLC6A3	Amp_Xp11.22	0.905	1
SLC6A3	Del_Xq21.1	0.905	1
SPANXE	FAM47C	0.905	1
SPANXE	Amp_4q12	0.905	1
SPANXE	Del_3q13.31	0.905	1
DDX5	Amp_13q34	0.905	1
DDX5	Del_3q13.31	0.905	1
FAM47C	GAGE2B	0.905	1
FAM47C	PLCG1	0.905	1
FAM47C	ROBO3	0.905	1
FAM47C	9q-Del	0.905	1
FAM47C	Amp_Xp11.22	0.905	1
FAM47C	Del_Xq21.1	0.905	1
GAGE2B	Amp_4q12	0.905	1
GAGE2B	Amp_13q34	0.905	1
GAGE2B	Del_3q13.31	0.905	1
PLCG1	Amp_4q12	0.905	1
PLCG1	Amp_13q34	0.905	1
PLCG1	Del_3q13.31	0.905	1
ROBO3	Amp_4q12	0.905	1
ROBO3	Amp_13q34	0.905	1
ROBO3	Del_3q13.31	0.905	1
10p-Amp	Del_12q12	0.905	1
4p-Del	Del_12q12	0.905	1
9q-Del	Amp_4q12	0.905	1
9q-Del	Amp_13q34	0.905	1
Xq-Del	Del_19q13.42	0.905	1
Amp_1q22	Del_18q23	0.905	1
Amp_13q34	Amp_Xp11.22	0.905	1
Amp_13q34	Del_Xq21.1	0.905	1
Amp_Xp11.22	Del_3q13.31	0.905	1
Del_7p22.3	Del_19q13.42	0.905	1
EGFR	Amp_17q25.1	0.906	1
PIK3CA	PIK3R1	0.906	1
PIK3CA	Amp_19p13.3	0.906	1
SMARCA4	Amp_12p13.32	0.906	1
8q-Amp	Amp_12p13.32	0.906	1
NF1	18p-Del	0.907	1
PCDHAC2	Amp_11q24.1	0.907	1
18p-Del	Amp_11q24.1	0.907	1
BRAF	MYH2	0.908	1
BRAF	BCOR	0.908	1
BRAF	Amp_17q25.1	0.908	1
CIC	NKX2-1	0.908	1
CIC	TMEM216	0.908	1
CIC	ZNF709	0.908	1
CREBZF	Del_6q22.31	0.908	1
F13A1	Del_1p36.32	0.908	1
LRRC37A2	Amp_8q24.13	0.908	1
MYH2	NKX2-1	0.908	1
MYH2	TMEM216	0.908	1
MYH2	ZNF709	0.908	1
MYH2	TRERF1	0.908	1
MYH2	Del_1q43	0.908	1
NF1	VAV3	0.908	1
NF1	Amp_3q26.33	0.908	1
NKX2-1	BCOR	0.908	1
NKX2-1	Amp_17q25.1	0.908	1
OR5D18	Del_1p36.32	0.908	1
TCF12	Amp_11q24.1	0.908	1
TMEM216	BCOR	0.908	1
VAV3	22q-Del	0.908	1
ZNF709	BCOR	0.908	1
ZNF709	Amp_17q25.1	0.908	1
BCOR	TRERF1	0.908	1
BCOR	Del_1p32.3	0.908	1
BCOR	Del_1q43	0.908	1
TRERF1	Amp_17q25.1	0.908	1
10p-Del	Xq-Del	0.908	1
12q-Del	22q-Del	0.908	1
14q-Del	Del_12q12	0.908	1
15q-Del	22q-Del	0.908	1
15q-Del	Amp_11q24.1	0.908	1
22q-Del	Amp_3q26.33	0.908	1
22q-Del	Amp_19p13.2	0.908	1
22q-Del	Del_8q24.3	0.908	1
Amp_2p24.3	Amp_8q24.13	0.908	1
Amp_2p24.3	Del_6q22.31	0.908	1
Amp_3q26.33	Amp_11q24.1	0.908	1
Amp_8q24.13	Del_7p22.3	0.908	1
Amp_11q24.1	Del_3q29	0.908	1
Amp_17q25.1	Del_1q43	0.908	1
FUBP1	HSPB8	0.909	1
FUBP1	PRNP	0.909	1
FUBP1	UBE2G2	0.909	1
HSPB8	Del_18q23	0.909	1
HTRA2	9p-Del	0.909	1
IDH1	4q-Del	0.909	1
UBE2G2	Del_18q23	0.909	1
PCDHAC2	Amp_7q32.3	0.909	1
DDX5	9p-Del	0.909	1
ROBO3	9p-Del	0.909	1
9p-Del	Del_Xq21.1	0.909	1
Amp_7p11.2	Amp_10p15.3	0.909	1
F13A1	19q-Del	0.91	1
OR5D18	19q-Del	0.91	1
DYNC1I1	PIK3R1	0.911	1
DYNC1I1	PTEN	0.911	1
DYNC1I1	SMARCA4	0.911	1
DYNC1I1	ZBTB20	0.911	1
F13A1	PIK3R1	0.911	1
F13A1	PTEN	0.911	1
F13A1	SMARCA4	0.911	1
F13A1	ZBTB20	0.911	1
F13A1	8q-Amp	0.911	1
F13A1	Amp_19p13.3	0.911	1
OR5D18	PIK3R1	0.911	1
OR5D18	PTEN	0.911	1
OR5D18	SMARCA4	0.911	1
OR5D18	ZBTB20	0.911	1
OR5D18	8q-Amp	0.911	1
OR5D18	Amp_19p13.3	0.911	1
PIK3R1	PRCP	0.911	1
PIK3R1	TNFRSF9	0.911	1
PRCP	PTEN	0.911	1
PRCP	SMARCA4	0.911	1
PRCP	8q-Amp	0.911	1
PRCP	Amp_19p13.3	0.911	1
PTEN	TNFRSF9	0.911	1
SMARCA4	TNFRSF9	0.911	1
TNFRSF9	ZBTB20	0.911	1
TNFRSF9	8q-Amp	0.911	1
TNFRSF9	Amp_19p13.3	0.911	1
Amp_1q22	Del_2q37.3	0.911	1
Amp_7q32.3	Del_2q37.3	0.911	1
Del_2q37.3	Del_5q34	0.911	1
F13A1	Del_1p32.3	0.912	1
OR5D18	Del_1p32.3	0.912	1
18q-Del	Del_6q24.3	0.912	1
HSPB8	PIK3CA	0.913	1
HSPB8	Amp_12p13.32	0.913	1
HSPB8	Del_2q37.3	0.913	1
NOTCH1	Del_4q34.3	0.913	1
PIK3CA	PRNP	0.913	1
PIK3CA	UBE2G2	0.913	1
PRNP	Amp_12p13.32	0.913	1
PRNP	Del_2q37.3	0.913	1
UBE2G2	Del_2q37.3	0.913	1
Amp_10p15.3	Del_6p25.3	0.913	1
BRAF	Del_9p23	0.914	1
BRAF	Del_10q26.3	0.914	1
NKX2-1	Del_10q26.3	0.914	1
ZNF709	Del_9p23	0.914	1
TRERF1	Del_9p23	0.914	1
13q-Del	Amp_10p15.3	0.914	1
Amp_10p15.3	Amp_13q34	0.914	1
Amp_10p15.3	Del_3q13.31	0.914	1
Del_1q43	Del_10q26.3	0.914	1
CREBZF	FSTL5	0.915	1
CREBZF	LRRC37A2	0.915	1
CREBZF	PTPN11	0.915	1
CREBZF	IRS4	0.915	1
CREBZF	19p-Amp	0.915	1
CREBZF	Xq-Del	0.915	1
CREBZF	Amp_2p24.3	0.915	1
CREBZF	Del_7p22.3	0.915	1
FSTL5	LRRC37A2	0.915	1
FSTL5	PTPN11	0.915	1
FSTL5	IRS4	0.915	1
FSTL5	19p-Amp	0.915	1
FSTL5	Xq-Del	0.915	1
FSTL5	Amp_2p24.3	0.915	1
IDH2	Del_18q23	0.915	1
LRRC37A2	PTPN11	0.915	1
LRRC37A2	IRS4	0.915	1
LRRC37A2	19p-Amp	0.915	1
LRRC37A2	Xq-Del	0.915	1
LRRC37A2	Amp_2p24.3	0.915	1
LRRC37A2	Del_7p22.3	0.915	1
PIK3R1	6q-Del	0.915	1
PTPN11	IRS4	0.915	1
PTPN11	19p-Amp	0.915	1
PTPN11	Xq-Del	0.915	1
PTPN11	Amp_2p24.3	0.915	1
PTPN11	Del_7p22.3	0.915	1
SPANXE	Del_1p36.32	0.915	1
DDX5	Del_1p36.32	0.915	1
GAGE2B	Del_1p36.32	0.915	1
IRS4	19p-Amp	0.915	1
IRS4	Xq-Del	0.915	1
IRS4	Amp_2p24.3	0.915	1
IRS4	Del_7p22.3	0.915	1
11q-Amp	Del_19q13.41	0.915	1
19p-Amp	Xq-Del	0.915	1
19p-Amp	Amp_2p24.3	0.915	1
19p-Amp	Del_7p22.3	0.915	1
8q-Amp	13q-Del	0.915	1
9q-Del	Del_1p36.32	0.915	1
Xq-Del	Amp_2p24.3	0.915	1
Amp_12q14.1	Del_18q23	0.915	1
HSPB8	13q-Del	0.916	1
HSPB8	6q-Del	0.916	1
IDH2	Amp_12q14.1	0.916	1
PRNP	13q-Del	0.916	1
PRNP	6q-Del	0.916	1
UBE2G2	13q-Del	0.916	1
UBE2G2	6q-Del	0.916	1
ARID1A	PIK3R1	0.917	1
ARID1A	SMARCA4	0.917	1
ARID1A	ZBTB20	0.917	1
HTRA2	19q-Del	0.917	1
PIK3R1	11q-Amp	0.917	1
SMARCA4	11q-Amp	0.917	1
TMEM216	Amp_7q31.2	0.917	1
ZBTB20	4p-Del	0.917	1
DDX5	19q-Del	0.917	1
GAGE2B	19q-Del	0.917	1
10p-Amp	8q-Amp	0.917	1
10p-Amp	Amp_19p13.3	0.917	1
11q-Amp	Amp_19p13.3	0.917	1
8q-Amp	4p-Del	0.917	1
4p-Del	Amp_19p13.3	0.917	1
Amp_8q24.13	Del_9p23	0.917	1
BRAF	TCF12	0.918	1
BRAF	VAV3	0.918	1
BRAF	12q-Del	0.918	1
BRAF	15q-Del	0.918	1
BRAF	Amp_1q32.1	0.918	1
BRAF	Amp_3q26.33	0.918	1
BRAF	Amp_19p13.2	0.918	1
BRAF	Del_3q29	0.918	1
BRAF	Del_8q24.3	0.918	1
DYNC1I1	Amp_12q14.1	0.918	1
DYNC1I1	Del_5p15.33	0.918	1
EIF1AX	PDGFRA	0.918	1
EIF1AX	Amp_1q22	0.918	1
EIF1AX	Del_5q34	0.918	1
F13A1	IDH2	0.918	1
F13A1	Amp_12q14.1	0.918	1
F13A1	Del_5p15.33	0.918	1
FSTL5	NOTCH1	0.918	1
HTRA2	PDGFRA	0.918	1
HTRA2	Amp_1q22	0.918	1
HTRA2	Del_5q34	0.918	1
IDH2	OR5D18	0.918	1
IDH2	PRCP	0.918	1
IDH2	TNFRSF9	0.918	1
NKX2-1	STK19	0.918	1
NKX2-1	TCF12	0.918	1
NKX2-1	12q-Del	0.918	1
NKX2-1	15q-Del	0.918	1
NKX2-1	Amp_1q32.1	0.918	1
NKX2-1	Amp_3q26.33	0.918	1
NKX2-1	Amp_19p13.2	0.918	1
NKX2-1	Del_3q29	0.918	1
NKX2-1	Del_8q24.3	0.918	1
NOTCH1	IRS4	0.918	1
NOTCH1	Amp_2p24.3	0.918	1
NOTCH1	Del_7p22.3	0.918	1
OR5D18	Amp_12q14.1	0.918	1
OR5D18	Del_5p15.33	0.918	1
OR5T3	Amp_1q22	0.918	1
OR5T3	Del_5q34	0.918	1
PDGFRA	SPANXE	0.918	1
PDGFRA	DDX5	0.918	1
PDGFRA	GAGE2B	0.918	1
PDGFRA	ROBO3	0.918	1
PDGFRA	13q-Del	0.918	1
PDGFRA	9q-Del	0.918	1
PDGFRA	Amp_Xp11.22	0.918	1
PRCP	Del_5p15.33	0.918	1
SPANXE	Amp_1q22	0.918	1
SPANXE	Del_5q34	0.918	1
STK19	ZNF709	0.918	1
STK19	TRERF1	0.918	1
STK19	Del_1q43	0.918	1
TCF12	TMEM216	0.918	1
TCF12	ZNF709	0.918	1
TCF12	Del_1q43	0.918	1
TMEM216	VAV3	0.918	1
TMEM216	15q-Del	0.918	1
TMEM216	Amp_1q32.1	0.918	1
TMEM216	Amp_3q26.33	0.918	1
TMEM216	Amp_19p13.2	0.918	1
TMEM216	Del_3q29	0.918	1
TMEM216	Del_8q24.3	0.918	1
TNFRSF9	Amp_12q14.1	0.918	1
TNFRSF9	Del_5p15.33	0.918	1
TP53	6q-Del	0.918	1
VAV3	ZNF709	0.918	1
VAV3	Del_1q43	0.918	1
ZNF709	12q-Del	0.918	1
ZNF709	15q-Del	0.918	1
ZNF709	Amp_1q32.1	0.918	1
ZNF709	Amp_3q26.33	0.918	1
ZNF709	Amp_19p13.2	0.918	1
ZNF709	Del_3q29	0.918	1
ZNF709	Del_8q24.3	0.918	1
DDX5	Amp_1q22	0.918	1
DDX5	Del_5q34	0.918	1
GAGE2B	Amp_1q22	0.918	1
GAGE2B	Del_5q34	0.918	1
PLCG1	Amp_1q22	0.918	1
PLCG1	Del_5q34	0.918	1
ROBO3	Amp_1q22	0.918	1
ROBO3	Del_5q34	0.918	1
TRERF1	12q-Del	0.918	1
TRERF1	15q-Del	0.918	1
TRERF1	Amp_1q32.1	0.918	1
TRERF1	Amp_3q26.33	0.918	1
TRERF1	Amp_19p13.2	0.918	1
TRERF1	Del_3q29	0.918	1
TRERF1	Del_8q24.3	0.918	1
12q-Del	Del_1q43	0.918	1
13q-Del	Amp_1q22	0.918	1
13q-Del	Del_5q34	0.918	1
15q-Del	Del_1q43	0.918	1
6q-Del	Amp_1q22	0.918	1
9q-Del	Amp_1q22	0.918	1
9q-Del	Del_5q34	0.918	1
Amp_1q22	Amp_Xp11.22	0.918	1
Amp_1q22	Del_Xq21.1	0.918	1
Amp_1q32.1	Del_1q43	0.918	1
Amp_3q26.33	Del_1q43	0.918	1
Amp_12q14.1	Del_14q24.3	0.918	1
Amp_19p13.2	Del_1q43	0.918	1
Amp_Xp11.22	Del_5q34	0.918	1
Del_1q43	Del_3q29	0.918	1
Del_1q43	Del_8q24.3	0.918	1
Del_2q37.3	Del_22q13.31	0.918	1
Del_5q34	Del_Xq21.1	0.918	1
FUBP1	NF1	0.919	1
STK19	9p-Del	0.919	1
10p-Amp	Del_22q13.31	0.919	1
11q-Amp	Del_11p15.1	0.919	1
7q-Amp	Amp_13q34	0.919	1
15q-Del	9p-Del	0.919	1
9p-Del	Amp_19p13.2	0.919	1
9p-Del	Del_8q24.3	0.919	1
Amp_11q24.1	Del_18q23	0.919	1
HSPB8	11p-Del	0.92	1
HSPB8	14q-Del	0.92	1
PRNP	11p-Del	0.92	1
PRNP	14q-Del	0.92	1
SPANXE	Del_1p32.3	0.92	1
UBE2G2	11p-Del	0.92	1
UBE2G2	14q-Del	0.92	1
DDX5	Del_1p32.3	0.92	1
GAGE2B	Del_1p32.3	0.92	1
9q-Del	Del_1p32.3	0.92	1
FSTL5	Del_19q13.41	0.921	1
LRRC37A2	Del_19q13.41	0.921	1
11q-Amp	Del_1p36.32	0.921	1
Xq-Del	Del_19q13.41	0.921	1
Del_7p22.3	Del_19q13.41	0.921	1
Del_14q24.3	Del_19q13.42	0.921	1
F13A1	1p-Del	0.922	1
OR5D18	1p-Del	0.922	1
PTPN11	Del_22q13.31	0.923	1
IRS4	Del_11p15.1	0.923	1
IRS4	Del_22q13.31	0.923	1
19p-Amp	Del_22q13.31	0.923	1
11p-Del	Del_9p21.3	0.923	1
Xq-Del	Del_11p15.1	0.923	1
Xq-Del	Del_22q13.31	0.923	1
Amp_2p24.3	Del_11p15.1	0.923	1
Del_7p22.3	Del_11p15.1	0.923	1
ARID1A	DYNC1I1	0.924	1
ARID1A	F13A1	0.924	1
ARID1A	OR5D18	0.924	1
ARID1A	TNFRSF9	0.924	1
CIC	PIK3R1	0.924	1
DYNC1I1	10p-Amp	0.924	1
DYNC1I1	11q-Amp	0.924	1
DYNC1I1	4p-Del	0.924	1
F13A1	10p-Amp	0.924	1
F13A1	11q-Amp	0.924	1
F13A1	4p-Del	0.924	1
OR5D18	10p-Amp	0.924	1
OR5D18	11q-Amp	0.924	1
OR5D18	4p-Del	0.924	1
PDGFRA	11p-Del	0.924	1
PDGFRA	14q-Del	0.924	1
PIK3R1	14q-Del	0.924	1
PRCP	10p-Amp	0.924	1
PRCP	11q-Amp	0.924	1
PRCP	4p-Del	0.924	1
TNFRSF9	10p-Amp	0.924	1
TNFRSF9	11q-Amp	0.924	1
TNFRSF9	4p-Del	0.924	1
10p-Amp	Amp_7p11.2	0.924	1
11q-Amp	7q-Amp	0.924	1
7q-Amp	Del_2q37.3	0.924	1
10q-Del	Del_13q14.2	0.924	1
14q-Del	Amp_1q22	0.924	1
14q-Del	Del_5q34	0.924	1
4p-Del	Amp_7p11.2	0.924	1
Amp_1q22	Del_9p23	0.924	1
Del_5q34	Del_9p23	0.924	1
Del_5q34	Del_10q26.3	0.924	1
Del_10q26.3	Del_11p15.5	0.924	1
EGFR	STK19	0.925	1
EIF1AX	Del_13q14.2	0.925	1
HTRA2	Del_11p15.5	0.925	1
MYH2	4q-Del	0.925	1
OR5T3	Del_11p15.5	0.925	1
OR5T3	Del_13q14.2	0.925	1
SPANXE	Del_11p15.5	0.925	1
VAV3	PCDHAC2	0.925	1
VAV3	18p-Del	0.925	1
PCDHAC2	15q-Del	0.925	1
PCDHAC2	Amp_3q26.33	0.925	1
GAGE2B	Del_11p15.5	0.925	1
GAGE2B	Del_13q14.2	0.925	1
PLCG1	Del_13q14.2	0.925	1
11q-Amp	19q-Del	0.925	1
7p-Amp	Del_22q13.31	0.925	1
18p-Del	Amp_19p13.2	0.925	1
18p-Del	Del_8q24.3	0.925	1
9q-Del	Del_11p15.5	0.925	1
Amp_17q25.1	Del_6p25.3	0.925	1
Del_10q26.3	Del_18q23	0.925	1
Del_11p15.5	Del_Xq21.1	0.925	1
HSPB8	Amp_10p15.3	0.927	1
PRNP	Amp_10p15.3	0.927	1
UBE2G2	Amp_10p15.3	0.927	1
BCOR	1p-Del	0.927	1
ARID1A	Del_5p15.33	0.928	1
BRAF	SLC6A3	0.928	1
BRAF	FAM47C	0.928	1
BRAF	Amp_4q12	0.928	1
BRAF	Amp_13q34	0.928	1
NF1	Del_3q13.31	0.928	1
NKX2-1	SLC6A3	0.928	1
NKX2-1	FAM47C	0.928	1
NKX2-1	Amp_4q12	0.928	1
NKX2-1	Del_3q13.31	0.928	1
SLC6A3	TMEM216	0.928	1
SLC6A3	ZNF709	0.928	1
SLC6A3	TRERF1	0.928	1
SLC6A3	Del_1q43	0.928	1
TMEM216	FAM47C	0.928	1
TMEM216	Amp_4q12	0.928	1
TMEM216	Amp_13q34	0.928	1
TMEM216	Del_3q13.31	0.928	1
ZNF709	Amp_4q12	0.928	1
ZNF709	Amp_13q34	0.928	1
ZNF709	Del_3q13.31	0.928	1
FAM47C	TRERF1	0.928	1
FAM47C	Del_1q43	0.928	1
TRERF1	Amp_4q12	0.928	1
TRERF1	Amp_13q34	0.928	1
TRERF1	Del_3q13.31	0.928	1
10p-Amp	Amp_12q14.1	0.928	1
18p-Del	Del_22q13.31	0.928	1
Amp_1q22	Amp_7q31.2	0.928	1
Amp_4q12	Del_1q43	0.928	1
Del_1q43	Del_3q13.31	0.928	1
ARID1A	Del_1p32.3	0.929	1
EGFR	18p-Del	0.929	1
OR5T3	Del_6q24.3	0.929	1
SPANXE	Del_6q24.3	0.929	1
PLCG1	Del_6q24.3	0.929	1
ROBO3	Del_6q24.3	0.929	1
11q-Amp	Del_1p32.3	0.929	1
22q-Del	Amp_12p13.32	0.929	1
22q-Del	Del_2q37.3	0.929	1
9q-Del	Del_6q24.3	0.929	1
Amp_Xp11.22	Del_6q24.3	0.929	1
ATRX	NKX2-1	0.931	1
ATRX	Del_13q14.2	0.931	1
SMARCA4	Del_9p21.3	0.931	1
Amp_19p13.3	Del_9p21.3	0.931	1
Del_1q43	Del_19q13.42	0.931	1
CIC	BCOR	0.932	1
CREBZF	EIF1AX	0.932	1
CREBZF	HTRA2	0.932	1
CREBZF	OR5T3	0.932	1
CREBZF	SPANXE	0.932	1
CREBZF	DDX5	0.932	1
CREBZF	GAGE2B	0.932	1
CREBZF	PLCG1	0.932	1
CREBZF	ROBO3	0.932	1
CREBZF	Amp_Xp11.22	0.932	1
CREBZF	Del_Xq21.1	0.932	1
EIF1AX	FSTL5	0.932	1
EIF1AX	LRRC37A2	0.932	1
EIF1AX	PTPN11	0.932	1
EIF1AX	IRS4	0.932	1
EIF1AX	19p-Amp	0.932	1
EIF1AX	Xq-Del	0.932	1
EIF1AX	Amp_2p24.3	0.932	1
EIF1AX	Del_7p22.3	0.932	1
FSTL5	HTRA2	0.932	1
FSTL5	OR5T3	0.932	1
FSTL5	SPANXE	0.932	1
FSTL5	DDX5	0.932	1
FSTL5	GAGE2B	0.932	1
FSTL5	PLCG1	0.932	1
FSTL5	ROBO3	0.932	1
FSTL5	9q-Del	0.932	1
FSTL5	Amp_Xp11.22	0.932	1
FSTL5	Del_Xq21.1	0.932	1
HTRA2	LRRC37A2	0.932	1
HTRA2	PTPN11	0.932	1
HTRA2	IRS4	0.932	1
HTRA2	19p-Amp	0.932	1
HTRA2	Amp_2p24.3	0.932	1
LRRC37A2	OR5T3	0.932	1
LRRC37A2	SPANXE	0.932	1
LRRC37A2	DDX5	0.932	1
LRRC37A2	GAGE2B	0.932	1
LRRC37A2	PLCG1	0.932	1
LRRC37A2	ROBO3	0.932	1
LRRC37A2	Amp_Xp11.22	0.932	1
LRRC37A2	Del_Xq21.1	0.932	1
NF1	18q-Del	0.932	1
OR5T3	PTPN11	0.932	1
OR5T3	IRS4	0.932	1
OR5T3	19p-Amp	0.932	1
OR5T3	Xq-Del	0.932	1
PTPN11	SPANXE	0.932	1
PTPN11	DDX5	0.932	1
PTPN11	GAGE2B	0.932	1
PTPN11	ROBO3	0.932	1
PTPN11	9q-Del	0.932	1
PTPN11	Amp_Xp11.22	0.932	1
PTPN11	Del_Xq21.1	0.932	1
SPANXE	IRS4	0.932	1
SPANXE	19p-Amp	0.932	1
SPANXE	1p-Del	0.932	1
SPANXE	Xq-Del	0.932	1
SPANXE	Amp_2p24.3	0.932	1
SPANXE	Del_7p22.3	0.932	1
DDX5	IRS4	0.932	1
DDX5	19p-Amp	0.932	1
DDX5	1p-Del	0.932	1
DDX5	Xq-Del	0.932	1
DDX5	Amp_2p24.3	0.932	1
DDX5	Del_7p22.3	0.932	1
GAGE2B	IRS4	0.932	1
GAGE2B	19p-Amp	0.932	1
GAGE2B	1p-Del	0.932	1
GAGE2B	Xq-Del	0.932	1
GAGE2B	Amp_2p24.3	0.932	1
GAGE2B	Del_7p22.3	0.932	1
IRS4	PLCG1	0.932	1
IRS4	9q-Del	0.932	1
IRS4	Amp_Xp11.22	0.932	1
IRS4	Del_Xq21.1	0.932	1
PLCG1	19p-Amp	0.932	1
PLCG1	Xq-Del	0.932	1
PLCG1	Amp_2p24.3	0.932	1
PLCG1	Del_7p22.3	0.932	1
ROBO3	19p-Amp	0.932	1
ROBO3	Xq-Del	0.932	1
19p-Amp	9q-Del	0.932	1
19p-Amp	Amp_Xp11.22	0.932	1
19p-Amp	Del_Xq21.1	0.932	1
18q-Del	22q-Del	0.932	1
1p-Del	9q-Del	0.932	1
22q-Del	4q-Del	0.932	1
9q-Del	Amp_2p24.3	0.932	1
Xq-Del	Amp_Xp11.22	0.932	1
Amp_2p24.3	Amp_Xp11.22	0.932	1
Amp_2p24.3	Del_Xq21.1	0.932	1
Amp_11q24.1	Del_6p25.3	0.932	1
Amp_Xp11.22	Del_7p22.3	0.932	1
Del_3q13.31	Del_14q24.3	0.932	1
ARID1A	Del_18q23	0.933	1
CREBZF	Del_18q23	0.933	1
FUBP1	LRRC37A2	0.933	1
FUBP1	IRS4	0.933	1
FUBP1	Del_7p22.3	0.933	1
MYH2	7p-Amp	0.933	1
MYH2	Del_4q34.3	0.933	1
OR5T3	TP53	0.933	1
TP53	ROBO3	0.933	1
TP53	Amp_Xp11.22	0.933	1
TP53	Del_3q13.31	0.933	1
TP53	Del_Xq21.1	0.933	1
BCOR	Del_4q34.3	0.933	1
IRS4	Del_18q23	0.933	1
7p-Amp	Amp_17q25.1	0.933	1
10q-Del	Amp_17q25.1	0.933	1
Amp_2p24.3	Del_18q23	0.933	1
Amp_12p13.32	Del_13q14.2	0.933	1
ATRX	Del_3p21.31	0.934	1
HSPB8	NF1	0.934	1
HSPB8	22q-Del	0.934	1
HSPB8	Amp_11q24.1	0.934	1
MYH2	Del_12q12	0.934	1
NF1	PRNP	0.934	1
NF1	UBE2G2	0.934	1
NKX2-1	Amp_7p11.2	0.934	1
PRNP	22q-Del	0.934	1
PRNP	Amp_11q24.1	0.934	1
TMEM216	7q-Amp	0.934	1
TMEM216	Amp_7p11.2	0.934	1
UBE2G2	22q-Del	0.934	1
UBE2G2	Amp_11q24.1	0.934	1
18q-Del	Del_6q22.31	0.934	1
Amp_7p11.2	Del_1q43	0.934	1
Amp_17q25.1	Del_12q12	0.934	1
Amp_19p13.3	Del_9p23	0.934	1
Del_14q24.3	Del_18q23	0.934	1
Amp_8q24.13	Del_13q14.2	0.935	1
Del_1p36.32	Del_4q34.3	0.935	1
Del_6q22.31	Del_13q14.2	0.935	1
TP53	Del_9p23	0.936	1
HTRA2	7p-Amp	0.937	1
HTRA2	Del_4q34.3	0.937	1
OR5T3	10q-Del	0.937	1
SPANXE	Del_4q34.3	0.937	1
DDX5	Del_4q34.3	0.937	1
PLCG1	7p-Amp	0.937	1
Amp_Xp11.22	Del_4q34.3	0.937	1
Del_4q34.3	Del_Xq21.1	0.937	1
BRAF	PDGFRA	0.938	1
BRAF	Amp_1q22	0.938	1
BRAF	Del_5q34	0.938	1
DYNC1I1	BCOR	0.938	1
DYNC1I1	Amp_17q25.1	0.938	1
F13A1	MYH2	0.938	1
F13A1	BCOR	0.938	1
F13A1	Amp_17q25.1	0.938	1
LRRC37A2	Del_2q37.3	0.938	1
MYH2	OR5D18	0.938	1
MYH2	PRCP	0.938	1
MYH2	TNFRSF9	0.938	1
NKX2-1	PDGFRA	0.938	1
NKX2-1	Amp_1q22	0.938	1
NKX2-1	Del_5q34	0.938	1
OR5D18	BCOR	0.938	1
OR5D18	Amp_17q25.1	0.938	1
PDGFRA	TMEM216	0.938	1
PDGFRA	ZNF709	0.938	1
PDGFRA	TRERF1	0.938	1
PDGFRA	Del_1q43	0.938	1
PRCP	Amp_17q25.1	0.938	1
TMEM216	Amp_1q22	0.938	1
TMEM216	Del_5q34	0.938	1
TNFRSF9	BCOR	0.938	1
TNFRSF9	Amp_17q25.1	0.938	1
ZNF709	Amp_1q22	0.938	1
ZNF709	Del_5q34	0.938	1
IRS4	Amp_12p13.32	0.938	1
TRERF1	Amp_1q22	0.938	1
TRERF1	Del_5q34	0.938	1
10p-Del	Amp_17q25.1	0.938	1
11p-Del	Amp_12q14.1	0.938	1
Xq-Del	Del_2q37.3	0.938	1
Amp_1q22	Del_1q43	0.938	1
Amp_2p24.3	Amp_12p13.32	0.938	1
Amp_2p24.3	Del_2q37.3	0.938	1
Amp_8q24.13	Amp_17q25.1	0.938	1
Del_1q43	Del_5q34	0.938	1
ARID1A	PIK3CA	0.939	1
ARID1A	10p-Amp	0.939	1
PIK3CA	11q-Amp	0.939	1
SMARCA4	Amp_10p15.3	0.939	1
VAV3	Del_13q14.2	0.939	1
PCDHAC2	Amp_7q31.2	0.939	1
10p-Amp	11q-Amp	0.939	1
10p-Amp	4p-Del	0.939	1
10p-Amp	Amp_12p13.32	0.939	1
11q-Amp	4p-Del	0.939	1
15q-Del	Del_13q14.2	0.939	1
4p-Del	Amp_12p13.32	0.939	1
Amp_3q26.33	Del_11p15.5	0.939	1
Amp_10p15.3	Amp_19p13.3	0.939	1
MYH2	Del_10q26.3	0.94	1
PTEN	Del_13q14.2	0.94	1
TCF12	4q-Del	0.94	1
VAV3	18q-Del	0.94	1
8q-Amp	Del_11p15.5	0.94	1
8q-Amp	Del_13q14.2	0.94	1
12q-Del	4q-Del	0.94	1
12q-Del	Del_6p25.3	0.94	1
18q-Del	Amp_19p13.2	0.94	1
18q-Del	Del_8q24.3	0.94	1
Amp_1q32.1	Del_6p25.3	0.94	1
CIC	13q-Del	0.941	1
EGFR	HSPB8	0.941	1
EGFR	PRNP	0.941	1
EGFR	UBE2G2	0.941	1
EIF1AX	Amp_8q24.13	0.941	1
HSPB8	PCDHAC2	0.941	1
HSPB8	18p-Del	0.941	1
HTRA2	Amp_8q24.13	0.941	1
OR5D18	Del_9p21.3	0.941	1
OR5T3	10p-Del	0.941	1
OR5T3	Del_6q22.31	0.941	1
PIK3R1	19q-Del	0.941	1
PRCP	Del_9p21.3	0.941	1
PRNP	PCDHAC2	0.941	1
PRNP	18p-Del	0.941	1
SLC6A3	PCDHAC2	0.941	1
SPANXE	Amp_8q24.13	0.941	1
SPANXE	Del_6q22.31	0.941	1
TCF12	Del_1p36.32	0.941	1
UBE2G2	18p-Del	0.941	1
PCDHAC2	Del_3q13.31	0.941	1
DDX5	Amp_8q24.13	0.941	1
PLCG1	Del_6q22.31	0.941	1
ROBO3	Del_6q22.31	0.941	1
7q-Amp	Amp_11q24.1	0.941	1
18p-Del	Amp_4q12	0.941	1
18p-Del	Amp_13q34	0.941	1
9q-Del	Amp_8q24.13	0.941	1
9q-Del	Del_6q22.31	0.941	1
Amp_Xp11.22	Del_6q22.31	0.941	1
Del_1q43	Del_19q13.41	0.941	1
Del_2q37.3	Del_6q24.3	0.941	1
Del_6q22.31	Del_Xq21.1	0.941	1
CREBZF	6q-Del	0.942	1
PTPN11	13q-Del	0.942	1
IRS4	13q-Del	0.942	1
IRS4	6q-Del	0.942	1
13q-Del	Amp_2p24.3	0.942	1
6q-Del	Amp_2p24.3	0.942	1
MYH2	PTEN	0.943	1
MYH2	SMARCA4	0.943	1
MYH2	8q-Amp	0.943	1
MYH2	Amp_19p13.3	0.943	1
PIK3R1	BCOR	0.943	1
STK19	Del_6q24.3	0.943	1
BCOR	8q-Amp	0.943	1
TRERF1	Del_14q24.3	0.943	1
8q-Amp	Amp_17q25.1	0.943	1
15q-Del	Del_6q24.3	0.943	1
22q-Del	Del_12q12	0.943	1
Del_1p36.32	Del_18q23	0.943	1
Del_1q43	Del_14q24.3	0.943	1
Del_3q29	Del_6q24.3	0.943	1
EGFR	Del_18q23	0.944	1
TCF12	19q-Del	0.944	1
TP53	9p-Del	0.944	1
9p-Del	Amp_4q12	0.944	1
ATRX	VAV3	0.945	1
DYNC1I1	STK19	0.945	1
DYNC1I1	TCF12	0.945	1
DYNC1I1	VAV3	0.945	1
DYNC1I1	12q-Del	0.945	1
DYNC1I1	15q-Del	0.945	1
DYNC1I1	Amp_1q32.1	0.945	1
DYNC1I1	Amp_3q26.33	0.945	1
DYNC1I1	Del_3q29	0.945	1
DYNC1I1	Del_8q24.3	0.945	1
EIF1AX	HTRA2	0.945	1
EIF1AX	OR5T3	0.945	1
EIF1AX	SPANXE	0.945	1
EIF1AX	DDX5	0.945	1
EIF1AX	GAGE2B	0.945	1
EIF1AX	PLCG1	0.945	1
EIF1AX	ROBO3	0.945	1
EIF1AX	9q-Del	0.945	1
EIF1AX	Amp_Xp11.22	0.945	1
EIF1AX	Del_Xq21.1	0.945	1
F13A1	STK19	0.945	1
F13A1	TCF12	0.945	1
F13A1	VAV3	0.945	1
F13A1	12q-Del	0.945	1
F13A1	15q-Del	0.945	1
F13A1	Amp_1q32.1	0.945	1
F13A1	Amp_3q26.33	0.945	1
F13A1	Amp_19p13.2	0.945	1
F13A1	Del_3q29	0.945	1
F13A1	Del_8q24.3	0.945	1
HTRA2	OR5T3	0.945	1
HTRA2	SPANXE	0.945	1
HTRA2	DDX5	0.945	1
HTRA2	GAGE2B	0.945	1
HTRA2	PLCG1	0.945	1
HTRA2	ROBO3	0.945	1
HTRA2	Amp_Xp11.22	0.945	1
OR5D18	STK19	0.945	1
OR5D18	15q-Del	0.945	1
OR5D18	Amp_1q32.1	0.945	1
OR5D18	Amp_3q26.33	0.945	1
OR5D18	Amp_19p13.2	0.945	1
OR5D18	Del_3q29	0.945	1
OR5D18	Del_8q24.3	0.945	1
OR5T3	SPANXE	0.945	1
OR5T3	DDX5	0.945	1
OR5T3	GAGE2B	0.945	1
OR5T3	PLCG1	0.945	1
OR5T3	9q-Del	0.945	1
OR5T3	Amp_Xp11.22	0.945	1
OR5T3	Del_Xq21.1	0.945	1
PRCP	STK19	0.945	1
PRCP	TCF12	0.945	1
PRCP	VAV3	0.945	1
PRCP	12q-Del	0.945	1
PRCP	15q-Del	0.945	1
PRCP	Amp_3q26.33	0.945	1
PRCP	Amp_19p13.2	0.945	1
PRCP	Del_3q29	0.945	1
PTEN	Del_6q24.3	0.945	1
SPANXE	DDX5	0.945	1
SPANXE	GAGE2B	0.945	1
SPANXE	PLCG1	0.945	1
SPANXE	ROBO3	0.945	1
SPANXE	9q-Del	0.945	1
SPANXE	Amp_Xp11.22	0.945	1
SPANXE	Del_Xq21.1	0.945	1
STK19	TNFRSF9	0.945	1
TCF12	Del_19q13.42	0.945	1
TNFRSF9	VAV3	0.945	1
TNFRSF9	12q-Del	0.945	1
TNFRSF9	15q-Del	0.945	1
TNFRSF9	Amp_3q26.33	0.945	1
TNFRSF9	Amp_19p13.2	0.945	1
TNFRSF9	Del_3q29	0.945	1
TNFRSF9	Del_8q24.3	0.945	1
DDX5	GAGE2B	0.945	1
DDX5	PLCG1	0.945	1
DDX5	ROBO3	0.945	1
DDX5	9q-Del	0.945	1
DDX5	Amp_Xp11.22	0.945	1
DDX5	Del_Xq21.1	0.945	1
GAGE2B	PLCG1	0.945	1
GAGE2B	ROBO3	0.945	1
GAGE2B	9q-Del	0.945	1
GAGE2B	Amp_Xp11.22	0.945	1
GAGE2B	Del_Xq21.1	0.945	1
PLCG1	ROBO3	0.945	1
PLCG1	9q-Del	0.945	1
PLCG1	Amp_Xp11.22	0.945	1
PLCG1	Del_Xq21.1	0.945	1
ROBO3	9q-Del	0.945	1
ROBO3	Amp_Xp11.22	0.945	1
ROBO3	Del_Xq21.1	0.945	1
10p-Amp	13q-Del	0.945	1
9q-Del	Amp_Xp11.22	0.945	1
Amp_Xp11.22	Del_Xq21.1	0.945	1
ARID1A	1p-Del	0.946	1
CIC	Del_4q34.3	0.946	1
NF1	Amp_1q22	0.946	1
11q-Amp	1p-Del	0.946	1
22q-Del	Del_5q34	0.946	1
Amp_7q31.2	Del_2q37.3	0.946	1
Amp_12p13.32	Del_9p21.3	0.946	1
NOTCH1	4q-Del	0.947	1
PTPN11	Amp_7q32.3	0.947	1
STK19	Del_3p21.31	0.947	1
TCF12	Del_1p32.3	0.947	1
VAV3	Del_3p21.31	0.947	1
IRS4	11p-Del	0.947	1
IRS4	14q-Del	0.947	1
11p-Del	Xq-Del	0.947	1
11p-Del	Amp_2p24.3	0.947	1
11p-Del	Del_7p22.3	0.947	1
14q-Del	Xq-Del	0.947	1
15q-Del	Del_3p21.31	0.947	1
15q-Del	Del_12q12	0.947	1
19q-Del	Del_18q23	0.947	1
Amp_3q26.33	Del_12q12	0.947	1
Amp_19p13.2	Del_3p21.31	0.947	1
Del_3p21.31	Del_8q24.3	0.947	1
Del_3q29	Del_12q12	0.947	1
BRAF	CREBZF	0.948	1
BRAF	FSTL5	0.948	1
BRAF	LRRC37A2	0.948	1
BRAF	PTPN11	0.948	1
BRAF	IRS4	0.948	1
BRAF	19p-Amp	0.948	1
BRAF	Xq-Del	0.948	1
BRAF	Amp_2p24.3	0.948	1
BRAF	Del_7p22.3	0.948	1
CREBZF	NKX2-1	0.948	1
CREBZF	TMEM216	0.948	1
CREBZF	ZNF709	0.948	1
CREBZF	TRERF1	0.948	1
CREBZF	Del_1q43	0.948	1
FSTL5	NKX2-1	0.948	1
FSTL5	TMEM216	0.948	1
FSTL5	ZNF709	0.948	1
FSTL5	TRERF1	0.948	1
FSTL5	Del_1q43	0.948	1
HSPB8	18q-Del	0.948	1
HSPB8	4q-Del	0.948	1
HSPB8	Del_6p25.3	0.948	1
LRRC37A2	NKX2-1	0.948	1
LRRC37A2	TMEM216	0.948	1
LRRC37A2	ZNF709	0.948	1
LRRC37A2	Del_1q43	0.948	1
NKX2-1	PTPN11	0.948	1
NKX2-1	IRS4	0.948	1
NKX2-1	19p-Amp	0.948	1
NKX2-1	Xq-Del	0.948	1
NKX2-1	Amp_2p24.3	0.948	1
NKX2-1	Del_7p22.3	0.948	1
NOTCH1	BCOR	0.948	1
NOTCH1	DDX5	0.948	1
NOTCH1	GAGE2B	0.948	1
NOTCH1	9q-Del	0.948	1
PRNP	18q-Del	0.948	1
PRNP	4q-Del	0.948	1
PRNP	Del_6p25.3	0.948	1
PTPN11	TMEM216	0.948	1
PTPN11	ZNF709	0.948	1
PTPN11	TRERF1	0.948	1
PTPN11	Del_1q43	0.948	1
TMEM216	IRS4	0.948	1
TMEM216	19p-Amp	0.948	1
TMEM216	Xq-Del	0.948	1
TMEM216	Amp_2p24.3	0.948	1
TMEM216	Del_7p22.3	0.948	1
UBE2G2	18q-Del	0.948	1
UBE2G2	4q-Del	0.948	1
UBE2G2	Del_6p25.3	0.948	1
ZNF709	IRS4	0.948	1
ZNF709	19p-Amp	0.948	1
ZNF709	Xq-Del	0.948	1
ZNF709	Amp_2p24.3	0.948	1
ZNF709	Del_7p22.3	0.948	1
IRS4	TRERF1	0.948	1
IRS4	Del_1q43	0.948	1
TRERF1	19p-Amp	0.948	1
TRERF1	Xq-Del	0.948	1
TRERF1	Amp_2p24.3	0.948	1
TRERF1	Del_7p22.3	0.948	1
19p-Amp	Del_1q43	0.948	1
7q-Amp	Amp_1q22	0.948	1
Amp_2p24.3	Del_1q43	0.948	1
Amp_7p11.2	Del_22q13.31	0.948	1
Del_1q43	Del_7p22.3	0.948	1
EGFR	18q-Del	0.949	1
PCDHAC2	18q-Del	0.949	1
PCDHAC2	Del_6p25.3	0.949	1
18p-Del	4q-Del	0.949	1
18p-Del	Del_6p25.3	0.949	1
BRAF	9p-Del	0.95	1
PIK3CA	18p-Del	0.95	1
SMARCA4	TP53	0.95	1
TMEM216	9p-Del	0.95	1
PCDHAC2	Del_2q37.3	0.95	1
TRERF1	9p-Del	0.95	1
Amp_7q32.3	Del_3q29	0.95	1
Del_9p21.3	Del_11p15.1	0.95	1
ATRX	Del_6q24.3	0.951	1
HSPB8	Del_3p21.31	0.951	1
HSPB8	Del_12q12	0.951	1
HTRA2	Del_11p15.1	0.951	1
HTRA2	Del_22q13.31	0.951	1
IDH2	MYH2	0.951	1
IDH2	BCOR	0.951	1
MYH2	Del_5p15.33	0.951	1
OR5T3	Del_11p15.1	0.951	1
PRNP	Del_3p21.31	0.951	1
PRNP	Del_12q12	0.951	1
SPANXE	Del_11p15.1	0.951	1
UBE2G2	Del_3p21.31	0.951	1
UBE2G2	Del_12q12	0.951	1
BCOR	Del_5p15.33	0.951	1
DDX5	Del_22q13.31	0.951	1
GAGE2B	Del_22q13.31	0.951	1
PLCG1	Del_22q13.31	0.951	1
9q-Del	Del_11p15.1	0.951	1
9q-Del	Del_22q13.31	0.951	1
Amp_10p15.3	Amp_12q14.1	0.951	1
Amp_Xp11.22	Del_22q13.31	0.951	1
Del_11p15.1	Del_Xq21.1	0.951	1
Del_22q13.31	Del_Xq21.1	0.951	1
CIC	FSTL5	0.952	1
DYNC1I1	SLC6A3	0.952	1
DYNC1I1	FAM47C	0.952	1
DYNC1I1	Amp_4q12	0.952	1
DYNC1I1	Amp_13q34	0.952	1
DYNC1I1	Del_3q13.31	0.952	1
F13A1	SLC6A3	0.952	1
F13A1	FAM47C	0.952	1
F13A1	Amp_4q12	0.952	1
F13A1	Amp_13q34	0.952	1
F13A1	Del_3q13.31	0.952	1
OR5D18	SLC6A3	0.952	1
OR5D18	FAM47C	0.952	1
OR5D18	Amp_4q12	0.952	1
OR5D18	Amp_13q34	0.952	1
OR5D18	Del_3q13.31	0.952	1
PRCP	SLC6A3	0.952	1
PRCP	FAM47C	0.952	1
PRCP	Amp_4q12	0.952	1
PRCP	Amp_13q34	0.952	1
PRCP	Del_3q13.31	0.952	1
SLC6A3	TNFRSF9	0.952	1
STK19	10q-Del	0.952	1
TNFRSF9	FAM47C	0.952	1
TNFRSF9	Amp_4q12	0.952	1
TNFRSF9	Amp_13q34	0.952	1
TNFRSF9	Del_3q13.31	0.952	1
7p-Amp	15q-Del	0.952	1
7p-Amp	Del_8q24.3	0.952	1
10q-Del	15q-Del	0.952	1
12q-Del	Del_4q34.3	0.952	1
13q-Del	Del_9p23	0.952	1
ARID1A	IDH1	0.953	1
EIF1AX	Del_9p21.3	0.953	1
MYH2	Del_22q13.31	0.953	1
NF1	ZBTB20	0.953	1
OR5T3	Del_9p21.3	0.953	1
TP53	Del_13q14.2	0.953	1
7p-Amp	22q-Del	0.953	1
8q-Amp	22q-Del	0.953	1
Amp_Xp11.22	Del_9p21.3	0.953	1
PIK3R1	VAV3	0.954	1
PIK3R1	12q-Del	0.954	1
PIK3R1	15q-Del	0.954	1
PTEN	STK19	0.954	1
PTEN	TCF12	0.954	1
SMARCA4	TCF12	0.954	1
STK19	8q-Amp	0.954	1
STK19	Amp_19p13.3	0.954	1
ZBTB20	Del_8q24.3	0.954	1
8q-Amp	12q-Del	0.954	1
8q-Amp	Amp_3q26.33	0.954	1
8q-Amp	Del_8q24.3	0.954	1
14q-Del	Del_13q14.2	0.954	1
15q-Del	Amp_19p13.3	0.954	1
18q-Del	Amp_13q34	0.954	1
18q-Del	Del_3q13.31	0.954	1
4q-Del	Del_3q13.31	0.954	1
Amp_1q32.1	Amp_19p13.3	0.954	1
Amp_3q26.33	Amp_19p13.3	0.954	1
HSPB8	PIK3R1	0.955	1
HSPB8	PTEN	0.955	1
HSPB8	SMARCA4	0.955	1
HSPB8	ZBTB20	0.955	1
HSPB8	8q-Amp	0.955	1
PIK3CA	Del_4q34.3	0.955	1
PIK3R1	PRNP	0.955	1
PIK3R1	UBE2G2	0.955	1
PRNP	PTEN	0.955	1
PRNP	SMARCA4	0.955	1
PRNP	ZBTB20	0.955	1
PRNP	8q-Amp	0.955	1
PRNP	Amp_19p13.3	0.955	1
PTEN	UBE2G2	0.955	1
SMARCA4	Del_4q34.3	0.955	1
UBE2G2	ZBTB20	0.955	1
UBE2G2	8q-Amp	0.955	1
UBE2G2	Amp_19p13.3	0.955	1
IRS4	Amp_10p15.3	0.955	1
6q-Del	Del_2q37.3	0.955	1
Del_2q37.3	Del_4q34.3	0.955	1
Del_9p23	Del_11p15.1	0.955	1
STK19	10p-Del	0.956	1
STK19	Del_6q22.31	0.956	1
10p-Del	15q-Del	0.956	1
12q-Del	Amp_8q24.13	0.956	1
12q-Del	Del_6q22.31	0.956	1
15q-Del	Del_6q22.31	0.956	1
Amp_7q31.2	Amp_12q14.1	0.956	1
Amp_8q24.13	Del_8q24.3	0.956	1
Del_3q29	Del_6q22.31	0.956	1
CREBZF	Del_9p23	0.957	1
FUBP1	OR5T3	0.957	1
FUBP1	ROBO3	0.957	1
PTPN11	Del_10q26.3	0.957	1
SPANXE	Del_18q23	0.957	1
TCF12	Del_19q13.41	0.957	1
PCDHAC2	Amp_1q22	0.957	1
PCDHAC2	Del_5q34	0.957	1
IRS4	Del_9p23	0.957	1
ROBO3	Del_18q23	0.957	1
19p-Amp	Del_9p23	0.957	1
4p-Del	Amp_7q32.3	0.957	1
9q-Del	Del_18q23	0.957	1
Xq-Del	Del_9p23	0.957	1
Amp_1q22	Del_14q24.3	0.957	1
Amp_2p24.3	Del_9p23	0.957	1
Del_14q24.3	Del_19q13.41	0.957	1
Del_18q23	Del_Xq21.1	0.957	1
ARID1A	Amp_17q25.1	0.958	1
BRAF	EIF1AX	0.958	1
BRAF	HTRA2	0.958	1
BRAF	OR5T3	0.958	1
BRAF	SPANXE	0.958	1
BRAF	DDX5	0.958	1
BRAF	GAGE2B	0.958	1
BRAF	PLCG1	0.958	1
BRAF	ROBO3	0.958	1
BRAF	9q-Del	0.958	1
BRAF	Amp_Xp11.22	0.958	1
BRAF	Del_Xq21.1	0.958	1
DYNC1I1	PDGFRA	0.958	1
DYNC1I1	Amp_1q22	0.958	1
DYNC1I1	Del_5q34	0.958	1
EIF1AX	NKX2-1	0.958	1
EIF1AX	TMEM216	0.958	1
EIF1AX	ZNF709	0.958	1
EIF1AX	TRERF1	0.958	1
EIF1AX	Del_1q43	0.958	1
F13A1	PDGFRA	0.958	1
F13A1	Amp_1q22	0.958	1
F13A1	Del_5q34	0.958	1
HSPB8	IDH2	0.958	1
HSPB8	Amp_12q14.1	0.958	1
HSPB8	Del_5p15.33	0.958	1
HTRA2	NKX2-1	0.958	1
HTRA2	ZNF709	0.958	1
HTRA2	TRERF1	0.958	1
HTRA2	Del_1q43	0.958	1
IDH2	PRNP	0.958	1
IDH2	UBE2G2	0.958	1
NKX2-1	OR5T3	0.958	1
NKX2-1	SPANXE	0.958	1
NKX2-1	DDX5	0.958	1
NKX2-1	GAGE2B	0.958	1
NKX2-1	PLCG1	0.958	1
NKX2-1	ROBO3	0.958	1
NKX2-1	9q-Del	0.958	1
NKX2-1	Amp_Xp11.22	0.958	1
NKX2-1	Del_Xq21.1	0.958	1
OR5D18	PDGFRA	0.958	1
OR5D18	Amp_1q22	0.958	1
OR5D18	Del_5q34	0.958	1
OR5T3	TMEM216	0.958	1
OR5T3	ZNF709	0.958	1
OR5T3	TRERF1	0.958	1
OR5T3	Del_1q43	0.958	1
PDGFRA	PRCP	0.958	1
PDGFRA	TNFRSF9	0.958	1
PRCP	Amp_1q22	0.958	1
PRCP	Del_5q34	0.958	1
PRNP	Amp_12q14.1	0.958	1
PRNP	Del_5p15.33	0.958	1
SLC6A3	Del_13q14.2	0.958	1
SPANXE	TMEM216	0.958	1
SPANXE	ZNF709	0.958	1
SPANXE	TRERF1	0.958	1
SPANXE	Del_1q43	0.958	1
TMEM216	DDX5	0.958	1
TMEM216	GAGE2B	0.958	1
TMEM216	PLCG1	0.958	1
TMEM216	ROBO3	0.958	1
TMEM216	9q-Del	0.958	1
TMEM216	Amp_Xp11.22	0.958	1
TMEM216	Del_Xq21.1	0.958	1
TNFRSF9	Amp_1q22	0.958	1
TNFRSF9	Del_5q34	0.958	1
UBE2G2	Amp_12q14.1	0.958	1
UBE2G2	Del_5p15.33	0.958	1
ZNF709	DDX5	0.958	1
ZNF709	GAGE2B	0.958	1
ZNF709	PLCG1	0.958	1
ZNF709	ROBO3	0.958	1
ZNF709	9q-Del	0.958	1
ZNF709	Amp_Xp11.22	0.958	1
ZNF709	Del_Xq21.1	0.958	1
BCOR	4p-Del	0.958	1
PCDHAC2	Del_3p21.31	0.958	1
DDX5	TRERF1	0.958	1
DDX5	Del_1q43	0.958	1
GAGE2B	TRERF1	0.958	1
GAGE2B	Del_1q43	0.958	1
PLCG1	TRERF1	0.958	1
PLCG1	Del_1q43	0.958	1
ROBO3	TRERF1	0.958	1
ROBO3	Del_1q43	0.958	1
TRERF1	Amp_Xp11.22	0.958	1
TRERF1	Del_Xq21.1	0.958	1
22q-Del	Amp_8q24.13	0.958	1
9q-Del	Del_1q43	0.958	1
Amp_4q12	Del_13q14.2	0.958	1
Amp_8q24.13	Del_4q34.3	0.958	1
Amp_10p15.3	Del_22q13.31	0.958	1
Amp_Xp11.22	Del_1q43	0.958	1
Del_1q43	Del_Xq21.1	0.958	1
Del_3q13.31	Del_11p15.5	0.958	1
Del_3q13.31	Del_13q14.2	0.958	1
Del_4q34.3	Del_9p23	0.958	1
PTPN11	Amp_7q31.2	0.959	1
TCF12	1p-Del	0.959	1
13q-Del	Del_9p21.3	0.959	1
Amp_2p24.3	Amp_7q31.2	0.959	1
Amp_4q12	Del_3p21.31	0.959	1
Amp_4q12	Del_12q12	0.959	1
Del_3q13.31	Del_12q12	0.959	1
EIF1AX	Del_2q37.3	0.96	1
HTRA2	Del_2q37.3	0.96	1
OR5T3	PIK3CA	0.96	1
PIK3CA	GAGE2B	0.96	1
PIK3CA	9q-Del	0.96	1
PTEN	Del_6q22.31	0.96	1
SPANXE	Amp_12p13.32	0.96	1
TMEM216	Del_13q14.2	0.96	1
ZNF709	Del_11p15.5	0.96	1
DDX5	Amp_12p13.32	0.96	1
PLCG1	Del_2q37.3	0.96	1
10p-Del	Amp_19p13.3	0.96	1
22q-Del	Amp_10p15.3	0.96	1
9q-Del	Del_2q37.3	0.96	1
Del_2q37.3	Del_Xq21.1	0.96	1
STK19	Amp_12q14.1	0.961	1
VAV3	Del_9p23	0.961	1
15q-Del	Del_5p15.33	0.961	1
15q-Del	Del_10q26.3	0.961	1
18p-Del	Del_19q13.42	0.961	1
4q-Del	9p-Del	0.961	1
Amp_1q32.1	Amp_12q14.1	0.961	1
Amp_1q32.1	Del_5p15.33	0.961	1
Amp_3q26.33	Amp_12q14.1	0.961	1
Amp_3q26.33	Del_5p15.33	0.961	1
Amp_8q24.13	Del_2q37.3	0.961	1
Amp_12q14.1	Amp_19p13.2	0.961	1
Amp_12q14.1	Del_3q29	0.961	1
Amp_19p13.2	Del_5p15.33	0.961	1
Del_2q37.3	Del_6q22.31	0.961	1
Del_3p21.31	Del_14q24.3	0.961	1
Del_3q13.31	Del_6q24.3	0.961	1
Del_3q29	Del_9p23	0.961	1
Del_3q29	Del_10q26.3	0.961	1
Del_5p15.33	Del_8q24.3	0.961	1
ARID1A	HSPB8	0.962	1
ARID1A	PRNP	0.962	1
ARID1A	UBE2G2	0.962	1
DYNC1I1	Amp_7q32.3	0.962	1
HSPB8	10p-Amp	0.962	1
HSPB8	11q-Amp	0.962	1
HSPB8	4p-Del	0.962	1
PRNP	10p-Amp	0.962	1
PRNP	11q-Amp	0.962	1
PRNP	4p-Del	0.962	1
TNFRSF9	Amp_7q32.3	0.962	1
TP53	Amp_3q26.33	0.962	1
TP53	Del_3q29	0.962	1
UBE2G2	10p-Amp	0.962	1
UBE2G2	11q-Amp	0.962	1
UBE2G2	4p-Del	0.962	1
Amp_11q24.1	Del_9p23	0.962	1
Del_1q43	Del_6q24.3	0.962	1
CIC	11q-Amp	0.963	1
FSTL5	NF1	0.963	1
FSTL5	Amp_11q24.1	0.963	1
LRRC37A2	Amp_11q24.1	0.963	1
NF1	IRS4	0.963	1
NF1	Del_7p22.3	0.963	1
NOTCH1	15q-Del	0.963	1
OR5T3	6q-Del	0.963	1
PTPN11	22q-Del	0.963	1
SPANXE	13q-Del	0.963	1
IRS4	22q-Del	0.963	1
PLCG1	6q-Del	0.963	1
ROBO3	6q-Del	0.963	1
19p-Amp	22q-Del	0.963	1
7q-Amp	8q-Amp	0.963	1
8q-Amp	Amp_7p11.2	0.963	1
22q-Del	Xq-Del	0.963	1
22q-Del	Amp_12q14.1	0.963	1
22q-Del	Del_5p15.33	0.963	1
22q-Del	Del_7p22.3	0.963	1
6q-Del	9q-Del	0.963	1
6q-Del	Amp_Xp11.22	0.963	1
Xq-Del	Amp_11q24.1	0.963	1
Amp_2p24.3	Amp_11q24.1	0.963	1
Amp_11q24.1	Del_7p22.3	0.963	1
Del_6p25.3	Del_18q23	0.963	1
Del_12q12	Del_22q13.31	0.963	1
IDH1	Del_5p15.33	0.964	1
18q-Del	Del_6p25.3	0.964	1
4q-Del	Del_9p23	0.964	1
Del_6p25.3	Del_9p23	0.964	1
CIC	F13A1	0.965	1
CIC	OR5D18	0.965	1
CREBZF	DYNC1I1	0.965	1
CREBZF	F13A1	0.965	1
CREBZF	OR5D18	0.965	1
CREBZF	PRCP	0.965	1
CREBZF	TNFRSF9	0.965	1
DYNC1I1	FSTL5	0.965	1
DYNC1I1	LRRC37A2	0.965	1
DYNC1I1	PTPN11	0.965	1
DYNC1I1	IRS4	0.965	1
DYNC1I1	Xq-Del	0.965	1
DYNC1I1	Amp_2p24.3	0.965	1
DYNC1I1	Del_7p22.3	0.965	1
F13A1	FSTL5	0.965	1
F13A1	PTPN11	0.965	1
F13A1	IRS4	0.965	1
F13A1	19p-Amp	0.965	1
F13A1	Xq-Del	0.965	1
F13A1	Amp_2p24.3	0.965	1
F13A1	Del_7p22.3	0.965	1
FSTL5	OR5D18	0.965	1
FSTL5	PRCP	0.965	1
FSTL5	TNFRSF9	0.965	1
LRRC37A2	OR5D18	0.965	1
LRRC37A2	PRCP	0.965	1
LRRC37A2	TNFRSF9	0.965	1
OR5D18	PTPN11	0.965	1
OR5D18	IRS4	0.965	1
OR5D18	19p-Amp	0.965	1
OR5D18	Xq-Del	0.965	1
OR5D18	Amp_2p24.3	0.965	1
OR5D18	Del_7p22.3	0.965	1
PIK3R1	18p-Del	0.965	1
PIK3R1	Amp_13q34	0.965	1
PRCP	PTPN11	0.965	1
PRCP	19p-Amp	0.965	1
PRCP	Xq-Del	0.965	1
PRCP	Amp_2p24.3	0.965	1
PRCP	Del_7p22.3	0.965	1
PTEN	Del_3q13.31	0.965	1
PTPN11	TNFRSF9	0.965	1
SLC6A3	SMARCA4	0.965	1
SMARCA4	PCDHAC2	0.965	1
SMARCA4	Del_3q13.31	0.965	1
TNFRSF9	IRS4	0.965	1
TNFRSF9	19p-Amp	0.965	1
TNFRSF9	Xq-Del	0.965	1
TNFRSF9	Amp_2p24.3	0.965	1
TNFRSF9	Del_7p22.3	0.965	1
PCDHAC2	7q-Amp	0.965	1
8q-Amp	Del_3q13.31	0.965	1
9p-Del	Amp_1q22	0.965	1
9p-Del	Del_5q34	0.965	1
Amp_7p11.2	Amp_8q24.13	0.965	1
Amp_13q34	Amp_19p13.3	0.965	1
Amp_17q25.1	Del_2q37.3	0.965	1
BRAF	10q-Del	0.966	1
HTRA2	11p-Del	0.966	1
NKX2-1	7p-Amp	0.966	1
OR5T3	11p-Del	0.966	1
SPANXE	11p-Del	0.966	1
TMEM216	7p-Amp	0.966	1
TMEM216	Del_4q34.3	0.966	1
TP53	IRS4	0.966	1
7p-Amp	Del_1q43	0.966	1
11p-Del	9q-Del	0.966	1
11p-Del	Del_Xq21.1	0.966	1
12q-Del	Del_22q13.31	0.966	1
14q-Del	9q-Del	0.966	1
4q-Del	Amp_1q22	0.966	1
4q-Del	Del_5q34	0.966	1
Amp_1q22	Del_6p25.3	0.966	1
Amp_3q26.33	Del_11p15.1	0.966	1
Amp_7q31.2	Amp_11q24.1	0.966	1
Amp_12q14.1	Del_4q34.3	0.966	1
Del_5q34	Del_6p25.3	0.966	1
ARID1A	15q-Del	0.967	1
ARID1A	Amp_19p13.2	0.967	1
ARID1A	Del_8q24.3	0.967	1
ARID1A	Del_13q14.2	0.967	1
DYNC1I1	Del_9p23	0.967	1
DYNC1I1	Del_10q26.3	0.967	1
PRCP	Del_9p23	0.967	1
PRCP	Del_10q26.3	0.967	1
TCF12	11q-Amp	0.967	1
TCF12	4p-Del	0.967	1
10p-Amp	12q-Del	0.967	1
10p-Amp	Del_3q29	0.967	1
10p-Amp	Del_8q24.3	0.967	1
10p-Amp	Del_11p15.5	0.967	1
11q-Amp	15q-Del	0.967	1
11q-Amp	Del_3q29	0.967	1
12q-Del	4p-Del	0.967	1
15q-Del	4p-Del	0.967	1
4p-Del	Del_3q29	0.967	1
Amp_1q22	Del_9p21.3	0.967	1
Del_3q13.31	Del_4q34.3	0.967	1
Del_5q34	Del_9p21.3	0.967	1
BRAF	10p-Del	0.968	1
NKX2-1	Amp_8q24.13	0.968	1
PIK3CA	18q-Del	0.968	1
TMEM216	Amp_8q24.13	0.968	1
TMEM216	Del_6q22.31	0.968	1
TRERF1	Amp_8q24.13	0.968	1
10p-Amp	Del_10q26.3	0.968	1
Amp_8q24.13	Del_1q43	0.968	1
Del_1q43	Del_6q22.31	0.968	1
ATRX	Del_9p23	0.969	1
BRAF	NKX2-1	0.969	1
BRAF	TMEM216	0.969	1
BRAF	ZNF709	0.969	1
BRAF	TRERF1	0.969	1
BRAF	Del_1q43	0.969	1
CREBZF	Del_1p36.32	0.969	1
DYNC1I1	Amp_7q31.2	0.969	1
FSTL5	Del_1p36.32	0.969	1
HSPB8	MYH2	0.969	1
HSPB8	BCOR	0.969	1
HSPB8	Amp_17q25.1	0.969	1
LRRC37A2	Del_1p36.32	0.969	1
MYH2	PRNP	0.969	1
MYH2	UBE2G2	0.969	1
NKX2-1	TMEM216	0.969	1
NKX2-1	ZNF709	0.969	1
PRNP	BCOR	0.969	1
PRNP	Amp_17q25.1	0.969	1
TMEM216	ZNF709	0.969	1
TMEM216	TRERF1	0.969	1
TMEM216	Del_1q43	0.969	1
UBE2G2	BCOR	0.969	1
UBE2G2	Amp_17q25.1	0.969	1
ZNF709	TRERF1	0.969	1
ZNF709	Del_1q43	0.969	1
PCDHAC2	Del_9p21.3	0.969	1
TRERF1	Del_1q43	0.969	1
22q-Del	9p-Del	0.969	1
9p-Del	Amp_11q24.1	0.969	1
Del_9p23	Del_11p15.5	0.969	1
CREBZF	18p-Del	0.97	1
EGFR	Xq-Del	0.97	1
LRRC37A2	PCDHAC2	0.97	1
LRRC37A2	19q-Del	0.97	1
PCDHAC2	Amp_2p24.3	0.97	1
IRS4	18p-Del	0.97	1
18p-Del	Xq-Del	0.97	1
18q-Del	Del_3p21.31	0.97	1
1p-Del	Del_18q23	0.97	1
Amp_4q12	Amp_12q14.1	0.97	1
Amp_4q12	Del_5p15.33	0.97	1
Amp_8q24.13	Amp_13q34	0.97	1
Amp_13q34	Del_5p15.33	0.97	1
Del_3p21.31	Del_5q34	0.97	1
Del_3p21.31	Del_6p25.3	0.97	1
Del_3q13.31	Del_6q22.31	0.97	1
ARID1A	Amp_11q24.1	0.971	1
CREBZF	Del_1p32.3	0.971	1
FSTL5	Del_1p32.3	0.971	1
LRRC37A2	Del_1p32.3	0.971	1
MYH2	Del_14q24.3	0.971	1
NOTCH1	PIK3CA	0.971	1
PTPN11	7q-Amp	0.971	1
PTPN11	Amp_7p11.2	0.971	1
BCOR	Del_14q24.3	0.971	1
FAM47C	Del_1p36.32	0.971	1
7q-Amp	Amp_2p24.3	0.971	1
4p-Del	Amp_7q31.2	0.971	1
9p-Del	Del_12q12	0.971	1
Amp_7q32.3	Amp_13q34	0.971	1
ATRX	EIF1AX	0.972	1
DYNC1I1	EIF1AX	0.972	1
DYNC1I1	HTRA2	0.972	1
DYNC1I1	OR5T3	0.972	1
DYNC1I1	SPANXE	0.972	1
DYNC1I1	DDX5	0.972	1
DYNC1I1	GAGE2B	0.972	1
DYNC1I1	PLCG1	0.972	1
DYNC1I1	ROBO3	0.972	1
DYNC1I1	9q-Del	0.972	1
DYNC1I1	Amp_Xp11.22	0.972	1
DYNC1I1	Del_Xq21.1	0.972	1
EIF1AX	F13A1	0.972	1
EIF1AX	OR5D18	0.972	1
EIF1AX	PRCP	0.972	1
EIF1AX	TNFRSF9	0.972	1
F13A1	HTRA2	0.972	1
F13A1	OR5T3	0.972	1
F13A1	SPANXE	0.972	1
F13A1	DDX5	0.972	1
F13A1	GAGE2B	0.972	1
F13A1	PLCG1	0.972	1
F13A1	ROBO3	0.972	1
F13A1	9q-Del	0.972	1
F13A1	Amp_Xp11.22	0.972	1
F13A1	Del_Xq21.1	0.972	1
HSPB8	STK19	0.972	1
HSPB8	TCF12	0.972	1
HSPB8	VAV3	0.972	1
HSPB8	12q-Del	0.972	1
HSPB8	15q-Del	0.972	1
HSPB8	Amp_1q32.1	0.972	1
HSPB8	Amp_3q26.33	0.972	1
HSPB8	Amp_19p13.2	0.972	1
HSPB8	Del_3q29	0.972	1
HSPB8	Del_8q24.3	0.972	1
HTRA2	OR5D18	0.972	1
HTRA2	PRCP	0.972	1
HTRA2	TNFRSF9	0.972	1
MYH2	BCOR	0.972	1
MYH2	Amp_17q25.1	0.972	1
NOTCH1	ZNF709	0.972	1
OR5D18	OR5T3	0.972	1
OR5D18	SPANXE	0.972	1
OR5D18	DDX5	0.972	1
OR5D18	GAGE2B	0.972	1
OR5D18	PLCG1	0.972	1
OR5D18	ROBO3	0.972	1
OR5D18	9q-Del	0.972	1
OR5D18	Amp_Xp11.22	0.972	1
OR5D18	Del_Xq21.1	0.972	1
OR5T3	PRCP	0.972	1
OR5T3	TNFRSF9	0.972	1
PRCP	SPANXE	0.972	1
PRCP	DDX5	0.972	1
PRCP	GAGE2B	0.972	1
PRCP	PLCG1	0.972	1
PRCP	ROBO3	0.972	1
PRCP	9q-Del	0.972	1
PRCP	Amp_Xp11.22	0.972	1
PRCP	Del_Xq21.1	0.972	1
PRNP	STK19	0.972	1
PRNP	TCF12	0.972	1
PRNP	VAV3	0.972	1
PRNP	12q-Del	0.972	1
PRNP	15q-Del	0.972	1
PRNP	Amp_1q32.1	0.972	1
PRNP	Amp_3q26.33	0.972	1
PRNP	Amp_19p13.2	0.972	1
PRNP	Del_3q29	0.972	1
PRNP	Del_8q24.3	0.972	1
SPANXE	TNFRSF9	0.972	1
SPANXE	Amp_10p15.3	0.972	1
SPANXE	Del_19q13.42	0.972	1
STK19	UBE2G2	0.972	1
TCF12	UBE2G2	0.972	1
TNFRSF9	DDX5	0.972	1
TNFRSF9	GAGE2B	0.972	1
TNFRSF9	PLCG1	0.972	1
TNFRSF9	ROBO3	0.972	1
TNFRSF9	9q-Del	0.972	1
TNFRSF9	Amp_Xp11.22	0.972	1
TNFRSF9	Del_Xq21.1	0.972	1
UBE2G2	VAV3	0.972	1
UBE2G2	12q-Del	0.972	1
UBE2G2	15q-Del	0.972	1
UBE2G2	Amp_1q32.1	0.972	1
UBE2G2	Amp_3q26.33	0.972	1
UBE2G2	Amp_19p13.2	0.972	1
UBE2G2	Del_3q29	0.972	1
UBE2G2	Del_8q24.3	0.972	1
BCOR	14q-Del	0.972	1
BCOR	Del_19q13.42	0.972	1
DDX5	Amp_10p15.3	0.972	1
GAGE2B	Amp_10p15.3	0.972	1
ROBO3	Amp_10p15.3	0.972	1
8q-Amp	Del_11p15.1	0.972	1
15q-Del	Del_18q23	0.972	1
18p-Del	Amp_12q14.1	0.972	1
9q-Del	Del_19q13.42	0.972	1
Amp_10p15.3	Del_Xq21.1	0.972	1
Del_8q24.3	Del_18q23	0.972	1
IDH1	PIK3R1	0.973	1
FAM47C	19q-Del	0.973	1
18p-Del	Amp_10p15.3	0.973	1
22q-Del	Del_11p15.1	0.973	1
BRAF	Del_22q13.31	0.974	1
CIC	SLC6A3	0.974	1
CIC	FAM47C	0.974	1
PDGFRA	ZBTB20	0.974	1
SMARCA4	Del_5q34	0.974	1
ZNF709	Del_11p15.1	0.974	1
FAM47C	Del_1p32.3	0.974	1
7q-Amp	Amp_12q14.1	0.974	1
8q-Amp	Amp_1q22	0.974	1
8q-Amp	Del_5q34	0.974	1
18p-Del	Del_19q13.41	0.974	1
Amp_1q22	Del_11p15.5	0.974	1
Del_5q34	Del_13q14.2	0.974	1
HTRA2	Amp_7q32.3	0.975	1
NOTCH1	SLC6A3	0.975	1
PIK3CA	Del_3p21.31	0.975	1
VAV3	Del_2q37.3	0.975	1
PCDHAC2	Del_14q24.3	0.975	1
10p-Amp	Amp_4q12	0.975	1
10p-Amp	Del_3q13.31	0.975	1
11q-Amp	Amp_13q34	0.975	1
12q-Del	Amp_12p13.32	0.975	1
4p-Del	Amp_4q12	0.975	1
4p-Del	Del_3q13.31	0.975	1
4q-Del	Del_11p15.5	0.975	1
Amp_7q32.3	Amp_Xp11.22	0.975	1
Amp_12p13.32	Del_8q24.3	0.975	1
Amp_19p13.3	Del_19q13.41	0.975	1
Del_2q37.3	Del_3q29	0.975	1
Del_2q37.3	Del_8q24.3	0.975	1
Del_6p25.3	Del_11p15.5	0.975	1
Del_10q26.3	Del_12q12	0.975	1
DYNC1I1	7q-Amp	0.976	1
DYNC1I1	Amp_7p11.2	0.976	1
HSPB8	SLC6A3	0.976	1
HSPB8	FAM47C	0.976	1
HSPB8	Amp_4q12	0.976	1
HSPB8	Amp_13q34	0.976	1
HSPB8	Del_3q13.31	0.976	1
PRCP	Amp_7p11.2	0.976	1
PRNP	SLC6A3	0.976	1
PRNP	FAM47C	0.976	1
PRNP	Amp_4q12	0.976	1
PRNP	Amp_13q34	0.976	1
PRNP	Del_3q13.31	0.976	1
PTEN	Del_6p25.3	0.976	1
SLC6A3	UBE2G2	0.976	1
SMARCA4	4q-Del	0.976	1
SMARCA4	Del_6p25.3	0.976	1
TNFRSF9	Amp_7p11.2	0.976	1
UBE2G2	FAM47C	0.976	1
UBE2G2	Amp_4q12	0.976	1
UBE2G2	Amp_13q34	0.976	1
UBE2G2	Del_3q13.31	0.976	1
BCOR	19q-Del	0.976	1
IRS4	Del_14q24.3	0.976	1
10p-Amp	7p-Amp	0.976	1
7p-Amp	4p-Del	0.976	1
8q-Amp	Amp_7q32.3	0.976	1
11p-Del	Del_6p25.3	0.976	1
9p-Del	Amp_7p11.2	0.976	1
Xq-Del	Del_14q24.3	0.976	1
Amp_1q22	Del_6q24.3	0.976	1
Amp_7q32.3	Amp_19p13.3	0.976	1
Amp_19p13.3	Del_6p25.3	0.976	1
CREBZF	18q-Del	0.977	1
CREBZF	1p-Del	0.977	1
EIF1AX	Amp_11q24.1	0.977	1
EIF1AX	Del_19q13.41	0.977	1
FSTL5	1p-Del	0.977	1
FUBP1	NKX2-1	0.977	1
HTRA2	22q-Del	0.977	1
LRRC37A2	1p-Del	0.977	1
OR5T3	Del_19q13.41	0.977	1
SPANXE	Del_19q13.41	0.977	1
STK19	7q-Amp	0.977	1
DDX5	22q-Del	0.977	1
GAGE2B	22q-Del	0.977	1
IRS4	18q-Del	0.977	1
IRS4	Del_6p25.3	0.977	1
PLCG1	22q-Del	0.977	1
PLCG1	Amp_11q24.1	0.977	1
ROBO3	Amp_11q24.1	0.977	1
TRERF1	Del_18q23	0.977	1
15q-Del	Amp_7p11.2	0.977	1
22q-Del	9q-Del	0.977	1
22q-Del	Amp_Xp11.22	0.977	1
22q-Del	Del_Xq21.1	0.977	1
9q-Del	Del_19q13.41	0.977	1
Xq-Del	Del_6p25.3	0.977	1
Amp_2p24.3	Del_6p25.3	0.977	1
Amp_4q12	Del_11p15.1	0.977	1
Amp_7q32.3	Del_9p23	0.977	1
Amp_11q24.1	Del_Xq21.1	0.977	1
Amp_13q34	Del_22q13.31	0.977	1
Del_3q13.31	Del_11p15.1	0.977	1
Del_3q29	Del_9p21.3	0.977	1
Del_6p25.3	Del_7p22.3	0.977	1
CIC	9q-Del	0.978	1
FUBP1	ZBTB20	0.978	1
MYH2	12q-Del	0.978	1
MYH2	15q-Del	0.978	1
MYH2	Amp_1q32.1	0.978	1
MYH2	Amp_19p13.2	0.978	1
PIK3R1	Del_18q23	0.978	1
STK19	6q-Del	0.978	1
STK19	Amp_17q25.1	0.978	1
BCOR	Amp_1q32.1	0.978	1
BCOR	Amp_3q26.33	0.978	1
10p-Amp	Amp_8q24.13	0.978	1
13q-Del	Del_3q29	0.978	1
13q-Del	Del_12q12	0.978	1
15q-Del	6q-Del	0.978	1
6q-Del	Amp_3q26.33	0.978	1
6q-Del	Del_3q29	0.978	1
Amp_1q22	Amp_12q14.1	0.978	1
Amp_3q26.33	Amp_17q25.1	0.978	1
Amp_7q31.2	Del_9p23	0.978	1
Amp_10p15.3	Amp_17q25.1	0.978	1
Amp_12q14.1	Del_5q34	0.978	1
Del_9p21.3	Del_11p15.5	0.978	1
ARID1A	18p-Del	0.979	1
ARID1A	Del_1p36.32	0.979	1
ATRX	Amp_13q34	0.979	1
BRAF	DYNC1I1	0.979	1
BRAF	F13A1	0.979	1
BRAF	OR5D18	0.979	1
BRAF	PRCP	0.979	1
BRAF	TNFRSF9	0.979	1
DYNC1I1	NKX2-1	0.979	1
DYNC1I1	TMEM216	0.979	1
DYNC1I1	ZNF709	0.979	1
DYNC1I1	TRERF1	0.979	1
DYNC1I1	Del_1q43	0.979	1
F13A1	NKX2-1	0.979	1
F13A1	TMEM216	0.979	1
F13A1	ZNF709	0.979	1
F13A1	TRERF1	0.979	1
F13A1	Del_1q43	0.979	1
HSPB8	PDGFRA	0.979	1
HSPB8	Amp_1q22	0.979	1
HSPB8	Del_5q34	0.979	1
NKX2-1	OR5D18	0.979	1
NKX2-1	PRCP	0.979	1
NKX2-1	TNFRSF9	0.979	1
OR5D18	ZNF709	0.979	1
OR5D18	TRERF1	0.979	1
OR5D18	Del_1q43	0.979	1
PDGFRA	PRNP	0.979	1
PDGFRA	UBE2G2	0.979	1
PIK3CA	ZNF709	0.979	1
PRCP	TMEM216	0.979	1
PRCP	ZNF709	0.979	1
PRCP	TRERF1	0.979	1
PRCP	Del_1q43	0.979	1
PRNP	Amp_1q22	0.979	1
PRNP	Del_5q34	0.979	1
SMARCA4	9p-Del	0.979	1
TMEM216	TNFRSF9	0.979	1
TNFRSF9	ZNF709	0.979	1
TNFRSF9	TRERF1	0.979	1
TNFRSF9	Del_1q43	0.979	1
UBE2G2	Amp_1q22	0.979	1
FAM47C	Del_19q13.42	0.979	1
11q-Amp	18p-Del	0.979	1
9p-Del	Amp_19p13.3	0.979	1
Amp_12p13.32	Del_9p23	0.979	1
Del_2q37.3	Del_9p23	0.979	1
Del_2q37.3	Del_10q26.3	0.979	1
ATRX	Del_12q12	0.98	1
CREBZF	Del_3p21.31	0.98	1
EGFR	Del_9p23	0.98	1
EIF1AX	Del_9p23	0.98	1
FSTL5	Del_3p21.31	0.98	1
IDH1	Del_12q12	0.98	1
OR5T3	Del_9p23	0.98	1
VAV3	14q-Del	0.98	1
BCOR	Del_19q13.41	0.98	1
PCDHAC2	Del_9p23	0.98	1
FAM47C	1p-Del	0.98	1
IRS4	Del_3p21.31	0.98	1
19p-Amp	Del_3p21.31	0.98	1
13q-Del	Del_11p15.1	0.98	1
14q-Del	15q-Del	0.98	1
14q-Del	Del_8q24.3	0.98	1
Xq-Del	Del_3p21.31	0.98	1
Amp_1q22	Del_4q34.3	0.98	1
Amp_2p24.3	Del_12q12	0.98	1
Amp_8q24.13	Del_11p15.1	0.98	1
Amp_8q24.13	Del_22q13.31	0.98	1
Del_2q37.3	Del_9p21.3	0.98	1
Del_3p21.31	Del_7p22.3	0.98	1
Del_10q26.3	Del_Xq21.1	0.98	1
EGFR	OR5T3	0.981	1
EGFR	PLCG1	0.981	1
HTRA2	Amp_7q31.2	0.981	1
IDH2	4q-Del	0.981	1
NF1	PCDHAC2	0.981	1
OR5T3	PCDHAC2	0.981	1
SMARCA4	Del_2q37.3	0.981	1
TMEM216	13q-Del	0.981	1
PCDHAC2	PLCG1	0.981	1
DDX5	18p-Del	0.981	1
19p-Amp	9p-Del	0.981	1
7p-Amp	Amp_10p15.3	0.981	1
8q-Amp	Del_2q37.3	0.981	1
18p-Del	22q-Del	0.981	1
4p-Del	Del_5q34	0.981	1
4q-Del	Del_5p15.33	0.981	1
6q-Del	Del_1q43	0.981	1
9p-Del	Xq-Del	0.981	1
9p-Del	Amp_2p24.3	0.981	1
Amp_7q31.2	Amp_Xp11.22	0.981	1
CREBZF	PIK3R1	0.982	1
FSTL5	PIK3R1	0.982	1
FSTL5	Amp_19p13.3	0.982	1
FUBP1	SLC6A3	0.982	1
OR5D18	9p-Del	0.982	1
PIK3R1	Del_1p36.32	0.982	1
PRCP	9p-Del	0.982	1
PTEN	Xq-Del	0.982	1
SMARCA4	Del_7p22.3	0.982	1
STK19	VAV3	0.982	1
STK19	Amp_3q26.33	0.982	1
TCF12	VAV3	0.982	1
TCF12	Amp_1q32.1	0.982	1
TCF12	Amp_19p13.2	0.982	1
VAV3	15q-Del	0.982	1
VAV3	Amp_3q26.33	0.982	1
VAV3	Del_14q24.3	0.982	1
ZBTB20	IRS4	0.982	1
ZNF709	11p-Del	0.982	1
TRERF1	14q-Del	0.982	1
8q-Amp	Amp_2p24.3	0.982	1
12q-Del	15q-Del	0.982	1
12q-Del	Amp_3q26.33	0.982	1
12q-Del	Del_3q29	0.982	1
14q-Del	Del_1q43	0.982	1
15q-Del	Amp_1q32.1	0.982	1
15q-Del	Amp_3q26.33	0.982	1
15q-Del	Amp_19p13.2	0.982	1
Amp_1q32.1	Del_8q24.3	0.982	1
Amp_3q26.33	Amp_19p13.2	0.982	1
Amp_3q26.33	Del_8q24.3	0.982	1
Amp_13q34	Del_18q23	0.982	1
Del_1p32.3	Del_18q23	0.982	1
Del_3q29	Del_8q24.3	0.982	1
CREBZF	HSPB8	0.983	1
CREBZF	PRNP	0.983	1
CREBZF	UBE2G2	0.983	1
EGFR	9p-Del	0.983	1
EGFR	Del_22q13.31	0.983	1
FSTL5	HSPB8	0.983	1
FSTL5	PRNP	0.983	1
FSTL5	UBE2G2	0.983	1
HSPB8	LRRC37A2	0.983	1
HSPB8	PTPN11	0.983	1
HSPB8	IRS4	0.983	1
HSPB8	19p-Amp	0.983	1
HSPB8	Xq-Del	0.983	1
HSPB8	Amp_2p24.3	0.983	1
HSPB8	Del_7p22.3	0.983	1
IDH2	Del_19q13.42	0.983	1
LRRC37A2	PRNP	0.983	1
LRRC37A2	UBE2G2	0.983	1
MYH2	Amp_4q12	0.983	1
PRNP	PTPN11	0.983	1
PRNP	IRS4	0.983	1
PRNP	19p-Amp	0.983	1
PRNP	Xq-Del	0.983	1
PRNP	Amp_2p24.3	0.983	1
PRNP	Del_7p22.3	0.983	1
PTPN11	UBE2G2	0.983	1
SMARCA4	Del_9p23	0.983	1
UBE2G2	IRS4	0.983	1
UBE2G2	19p-Amp	0.983	1
UBE2G2	Xq-Del	0.983	1
UBE2G2	Amp_2p24.3	0.983	1
UBE2G2	Del_7p22.3	0.983	1
BCOR	FAM47C	0.983	1
BCOR	Amp_4q12	0.983	1
PCDHAC2	9p-Del	0.983	1
7q-Amp	4p-Del	0.983	1
22q-Del	Amp_7p11.2	0.983	1
4q-Del	Amp_10p15.3	0.983	1
6q-Del	Del_13q14.2	0.983	1
Amp_7q32.3	Amp_11q24.1	0.983	1
Amp_19p13.3	Del_10q26.3	0.983	1
MYH2	NF1	0.984	1
PTEN	13q-Del	0.984	1
PTEN	6q-Del	0.984	1
PTEN	Amp_19p13.3	0.984	1
ZBTB20	Amp_19p13.3	0.984	1
FAM47C	Del_19q13.41	0.984	1
7q-Amp	Del_9p23	0.984	1
13q-Del	Del_10q26.3	0.984	1
14q-Del	Amp_7p11.2	0.984	1
19q-Del	Amp_19p13.3	0.984	1
Amp_4q12	Amp_12p13.32	0.984	1
Amp_11q24.1	Amp_17q25.1	0.984	1
Amp_12p13.32	Amp_13q34	0.984	1
Del_3p21.31	Del_5p15.33	0.984	1
ARID1A	18q-Del	0.985	1
ARID1A	4q-Del	0.985	1
ARID1A	Del_6p25.3	0.985	1
F13A1	Del_13q14.2	0.985	1
FSTL5	IDH2	0.985	1
FSTL5	Amp_12q14.1	0.985	1
HTRA2	4q-Del	0.985	1
HTRA2	Del_6p25.3	0.985	1
PIK3R1	Del_1p32.3	0.985	1
SLC6A3	13q-Del	0.985	1
SPANXE	4q-Del	0.985	1
SPANXE	Del_6p25.3	0.985	1
TP53	Del_6q22.31	0.985	1
DDX5	4q-Del	0.985	1
IRS4	Del_5p15.33	0.985	1
10p-Amp	4q-Del	0.985	1
10p-Amp	Del_11p15.1	0.985	1
19p-Amp	Amp_12q14.1	0.985	1
19p-Amp	Del_5p15.33	0.985	1
8q-Amp	Amp_7q31.2	0.985	1
13q-Del	Del_3q13.31	0.985	1
9q-Del	Del_6p25.3	0.985	1
Xq-Del	Amp_12q14.1	0.985	1
Amp_2p24.3	Del_5p15.33	0.985	1
Amp_7q31.2	Amp_19p13.3	0.985	1
Amp_7q32.3	Amp_12q14.1	0.985	1
Amp_10p15.3	Del_8q24.3	0.985	1
Amp_19p13.3	Del_1p32.3	0.985	1
Del_6p25.3	Del_Xq21.1	0.985	1
CREBZF	Del_9p21.3	0.986	1
DYNC1I1	F13A1	0.986	1
DYNC1I1	OR5D18	0.986	1
DYNC1I1	PRCP	0.986	1
DYNC1I1	TNFRSF9	0.986	1
EIF1AX	HSPB8	0.986	1
EIF1AX	PRNP	0.986	1
EIF1AX	UBE2G2	0.986	1
F13A1	OR5D18	0.986	1
F13A1	PRCP	0.986	1
F13A1	TNFRSF9	0.986	1
F13A1	Del_6q24.3	0.986	1
FSTL5	Del_13q14.2	0.986	1
HSPB8	HTRA2	0.986	1
HSPB8	OR5T3	0.986	1
HSPB8	SPANXE	0.986	1
HSPB8	DDX5	0.986	1
HSPB8	GAGE2B	0.986	1
HSPB8	PLCG1	0.986	1
HSPB8	ROBO3	0.986	1
HSPB8	9q-Del	0.986	1
HSPB8	Amp_Xp11.22	0.986	1
HSPB8	Del_Xq21.1	0.986	1
HTRA2	PRNP	0.986	1
HTRA2	UBE2G2	0.986	1
OR5D18	PRCP	0.986	1
OR5D18	TNFRSF9	0.986	1
OR5T3	PRNP	0.986	1
OR5T3	UBE2G2	0.986	1
PRCP	TNFRSF9	0.986	1
PRCP	Del_6q24.3	0.986	1
PRNP	SPANXE	0.986	1
PRNP	DDX5	0.986	1
PRNP	GAGE2B	0.986	1
PRNP	PLCG1	0.986	1
PRNP	ROBO3	0.986	1
PRNP	9q-Del	0.986	1
PRNP	Amp_Xp11.22	0.986	1
PRNP	Del_Xq21.1	0.986	1
PTPN11	Del_9p21.3	0.986	1
SPANXE	UBE2G2	0.986	1
UBE2G2	DDX5	0.986	1
UBE2G2	GAGE2B	0.986	1
UBE2G2	PLCG1	0.986	1
UBE2G2	ROBO3	0.986	1
UBE2G2	9q-Del	0.986	1
UBE2G2	Amp_Xp11.22	0.986	1
UBE2G2	Del_Xq21.1	0.986	1
VAV3	9p-Del	0.986	1
8q-Amp	11p-Del	0.986	1
12q-Del	9p-Del	0.986	1
9p-Del	Amp_3q26.33	0.986	1
9p-Del	Del_3q29	0.986	1
9p-Del	Del_5p15.33	0.986	1
9p-Del	Del_14q24.3	0.986	1
Amp_1q22	Del_11p15.1	0.986	1
Amp_2p24.3	Del_9p21.3	0.986	1
Del_7p22.3	Del_9p21.3	0.986	1
ARID1A	IRS4	0.987	1
ARID1A	Del_7p22.3	0.987	1
ATRX	Amp_11q24.1	0.987	1
CIC	IDH2	0.987	1
HTRA2	Del_3p21.31	0.987	1
IDH1	11p-Del	0.987	1
LRRC37A2	11q-Amp	0.987	1
OR5T3	Del_3p21.31	0.987	1
OR5T3	Del_12q12	0.987	1
SLC6A3	TCF12	0.987	1
VAV3	Amp_13q34	0.987	1
FAM47C	Amp_19p13.2	0.987	1
FAM47C	Del_8q24.3	0.987	1
PLCG1	Del_12q12	0.987	1
11q-Amp	Del_7p22.3	0.987	1
7q-Amp	Amp_Xp11.22	0.987	1
11p-Del	Amp_4q12	0.987	1
11p-Del	Del_3q13.31	0.987	1
11p-Del	Del_13q14.2	0.987	1
12q-Del	Amp_4q12	0.987	1
12q-Del	Del_3q13.31	0.987	1
15q-Del	Amp_13q34	0.987	1
18q-Del	Del_14q24.3	0.987	1
4q-Del	Del_9p21.3	0.987	1
Amp_3q26.33	Amp_13q34	0.987	1
Amp_7p11.2	Amp_13q34	0.987	1
Amp_10p15.3	Del_3p21.31	0.987	1
Amp_13q34	Del_3q29	0.987	1
Amp_19p13.3	Del_5p15.33	0.987	1
Del_3p21.31	Del_Xq21.1	0.987	1
Del_3q13.31	Del_8q24.3	0.987	1
Del_6q24.3	Del_7p22.3	0.987	1
Del_12q12	Del_Xq21.1	0.987	1
BRAF	NF1	0.988	1
DYNC1I1	7p-Amp	0.988	1
DYNC1I1	10q-Del	0.988	1
DYNC1I1	Del_4q34.3	0.988	1
EGFR	MYH2	0.988	1
NF1	ZNF709	0.988	1
NF1	Del_14q24.3	0.988	1
NKX2-1	Amp_11q24.1	0.988	1
PRCP	10q-Del	0.988	1
10p-Amp	Del_3p21.31	0.988	1
11q-Amp	Del_18q23	0.988	1
7q-Amp	Amp_8q24.13	0.988	1
11p-Del	22q-Del	0.988	1
13q-Del	Del_5p15.33	0.988	1
18p-Del	Del_1p36.32	0.988	1
18q-Del	Amp_11q24.1	0.988	1
4p-Del	Del_3p21.31	0.988	1
Amp_11q24.1	Del_1q43	0.988	1
Amp_17q25.1	Del_5q34	0.988	1
Amp_17q25.1	Del_10q26.3	0.988	1
ATRX	Amp_2p24.3	0.989	1
CREBZF	Del_4q34.3	0.989	1
CREBZF	Del_19q13.42	0.989	1
DYNC1I1	10p-Del	0.989	1
DYNC1I1	Amp_8q24.13	0.989	1
EIF1AX	Amp_19p13.3	0.989	1
FSTL5	Del_4q34.3	0.989	1
HTRA2	8q-Amp	0.989	1
IDH2	Del_19q13.41	0.989	1
MYH2	10q-Del	0.989	1
NF1	Amp_1q32.1	0.989	1
NF1	Del_8q24.3	0.989	1
NF1	Del_10q26.3	0.989	1
OR5D18	Amp_8q24.13	0.989	1
OR5D18	Del_6q22.31	0.989	1
PDGFRA	Del_10q26.3	0.989	1
PIK3R1	GAGE2B	0.989	1
PRCP	10p-Del	0.989	1
PRCP	Del_6q22.31	0.989	1
PTEN	PLCG1	0.989	1
PTPN11	7p-Amp	0.989	1
PTPN11	10q-Del	0.989	1
SMARCA4	ROBO3	0.989	1
SPANXE	ZBTB20	0.989	1
ZBTB20	GAGE2B	0.989	1
PLCG1	Del_14q24.3	0.989	1
8q-Amp	Amp_Xp11.22	0.989	1
14q-Del	Del_18q23	0.989	1
15q-Del	Del_1p36.32	0.989	1
18p-Del	19q-Del	0.989	1
9p-Del	Amp_12p13.32	0.989	1
Amp_4q12	Del_9p21.3	0.989	1
Del_3p21.31	Del_6q22.31	0.989	1
Del_11p15.1	Del_22q13.31	0.989	1
Del_14q24.3	Del_22q13.31	0.989	1
ATRX	12q-Del	0.99	1
BRAF	HSPB8	0.99	1
BRAF	PRNP	0.99	1
BRAF	UBE2G2	0.99	1
HSPB8	NKX2-1	0.99	1
HSPB8	TMEM216	0.99	1
HSPB8	ZNF709	0.99	1
HSPB8	TRERF1	0.99	1
HSPB8	Del_1q43	0.99	1
MYH2	10p-Del	0.99	1
NKX2-1	PRNP	0.99	1
NKX2-1	UBE2G2	0.99	1
NOTCH1	OR5D18	0.99	1
PDGFRA	12q-Del	0.99	1
PIK3CA	4p-Del	0.99	1
PIK3R1	1p-Del	0.99	1
PRNP	TMEM216	0.99	1
PRNP	ZNF709	0.99	1
PRNP	TRERF1	0.99	1
PRNP	Del_1q43	0.99	1
PTPN11	10p-Del	0.99	1
SLC6A3	Amp_4q12	0.99	1
SMARCA4	10p-Amp	0.99	1
SMARCA4	4p-Del	0.99	1
TMEM216	UBE2G2	0.99	1
UBE2G2	ZNF709	0.99	1
UBE2G2	TRERF1	0.99	1
UBE2G2	Del_1q43	0.99	1
IRS4	Del_6q22.31	0.99	1
11q-Amp	Del_2q37.3	0.99	1
8q-Amp	Amp_10p15.3	0.99	1
15q-Del	19q-Del	0.99	1
15q-Del	Del_19q13.42	0.99	1
1p-Del	Amp_19p13.3	0.99	1
4q-Del	Del_19q13.42	0.99	1
Amp_1q22	Amp_1q32.1	0.99	1
Amp_1q22	Amp_3q26.33	0.99	1
Amp_1q22	Amp_12p13.32	0.99	1
Amp_1q22	Del_3q29	0.99	1
Amp_1q22	Del_8q24.3	0.99	1
Amp_4q12	Amp_10p15.3	0.99	1
Amp_4q12	Del_3q13.31	0.99	1
Amp_7q31.2	Amp_8q24.13	0.99	1
Amp_10p15.3	Del_11p15.1	0.99	1
Del_3q29	Del_5q34	0.99	1
Del_6q22.31	Del_7p22.3	0.99	1
Del_6q24.3	Del_22q13.31	0.99	1
ARID1A	13q-Del	0.991	1
CREBZF	Del_19q13.41	0.991	1
DYNC1I1	Del_22q13.31	0.991	1
EIF1AX	9p-Del	0.991	1
HTRA2	IDH2	0.991	1
IDH2	GAGE2B	0.991	1
IDH2	Del_1p36.32	0.991	1
OR5T3	9p-Del	0.991	1
SPANXE	Del_5p15.33	0.991	1
STK19	Amp_7q32.3	0.991	1
PCDHAC2	Amp_7p11.2	0.991	1
DDX5	Del_5p15.33	0.991	1
PLCG1	9p-Del	0.991	1
PLCG1	Amp_12q14.1	0.991	1
7p-Amp	8q-Amp	0.991	1
10q-Del	Amp_19p13.3	0.991	1
12q-Del	Del_13q14.2	0.991	1
9p-Del	Amp_7q31.2	0.991	1
9p-Del	Del_6p25.3	0.991	1
Amp_12q14.1	Del_Xq21.1	0.991	1
Amp_19p13.3	Del_19q13.42	0.991	1
Amp_Xp11.22	Del_5p15.33	0.991	1
Del_5p15.33	Del_13q14.2	0.991	1
Del_6p25.3	Del_11p15.1	0.991	1
CREBZF	MYH2	0.992	1
CREBZF	NOTCH1	0.992	1
CREBZF	BCOR	0.992	1
DYNC1I1	Del_18q23	0.992	1
EGFR	15q-Del	0.992	1
EIF1AX	11q-Amp	0.992	1
F13A1	FUBP1	0.992	1
F13A1	Del_18q23	0.992	1
FSTL5	BCOR	0.992	1
HTRA2	4p-Del	0.992	1
IDH1	Del_2q37.3	0.992	1
IDH2	19q-Del	0.992	1
IDH2	4p-Del	0.992	1
IDH2	Del_1p32.3	0.992	1
MYH2	19p-Amp	0.992	1
MYH2	Del_6p25.3	0.992	1
MYH2	Del_9p21.3	0.992	1
PRCP	Del_18q23	0.992	1
SPANXE	19q-Del	0.992	1
SPANXE	4p-Del	0.992	1
TP53	Amp_13q34	0.992	1
VAV3	Del_6q24.3	0.992	1
BCOR	4q-Del	0.992	1
PCDHAC2	Del_8q24.3	0.992	1
ROBO3	10p-Amp	0.992	1
7q-Amp	9p-Del	0.992	1
7q-Amp	Amp_19p13.3	0.992	1
11p-Del	Amp_1q22	0.992	1
11p-Del	Del_4q34.3	0.992	1
11p-Del	Del_5q34	0.992	1
15q-Del	18p-Del	0.992	1
19q-Del	9q-Del	0.992	1
4p-Del	Amp_Xp11.22	0.992	1
4p-Del	Del_5p15.33	0.992	1
9p-Del	Amp_7q32.3	0.992	1
Amp_3q26.33	Del_6q24.3	0.992	1
Amp_17q25.1	Del_7p22.3	0.992	1
Del_6q24.3	Del_8q24.3	0.992	1
Del_9p23	Del_14q24.3	0.992	1
BRAF	Del_6p25.3	0.993	1
CIC	TCF12	0.993	1
CREBZF	VAV3	0.993	1
DYNC1I1	HSPB8	0.993	1
DYNC1I1	PRNP	0.993	1
DYNC1I1	UBE2G2	0.993	1
F13A1	HSPB8	0.993	1
F13A1	PRNP	0.993	1
F13A1	UBE2G2	0.993	1
HSPB8	OR5D18	0.993	1
HSPB8	PRCP	0.993	1
HSPB8	TNFRSF9	0.993	1
LRRC37A2	TCF12	0.993	1
LRRC37A2	15q-Del	0.993	1
NF1	PTEN	0.993	1
OR5D18	PRNP	0.993	1
OR5D18	UBE2G2	0.993	1
PDGFRA	SLC6A3	0.993	1
PDGFRA	Del_3q13.31	0.993	1
PRCP	PRNP	0.993	1
PRCP	UBE2G2	0.993	1
PRCP	6q-Del	0.993	1
PRNP	TNFRSF9	0.993	1
PTPN11	Amp_1q32.1	0.993	1
PTPN11	Amp_3q26.33	0.993	1
STK19	Del_7p22.3	0.993	1
TMEM216	4q-Del	0.993	1
TMEM216	Del_12q12	0.993	1
TNFRSF9	UBE2G2	0.993	1
TP53	Del_3p21.31	0.993	1
VAV3	Amp_2p24.3	0.993	1
IRS4	Amp_3q26.33	0.993	1
IRS4	Del_8q24.3	0.993	1
10p-Amp	11p-Del	0.993	1
19p-Amp	15q-Del	0.993	1
19p-Amp	Amp_1q32.1	0.993	1
19p-Amp	Amp_3q26.33	0.993	1
10q-Del	Amp_3q26.33	0.993	1
11p-Del	13q-Del	0.993	1
14q-Del	18p-Del	0.993	1
15q-Del	1p-Del	0.993	1
15q-Del	Del_19q13.41	0.993	1
22q-Del	Amp_13q34	0.993	1
22q-Del	Del_3q13.31	0.993	1
Xq-Del	Amp_1q32.1	0.993	1
Xq-Del	Del_3q29	0.993	1
Xq-Del	Del_8q24.3	0.993	1
Amp_4q12	Del_5q34	0.993	1
Amp_7q32.3	Amp_8q24.13	0.993	1
Amp_10p15.3	Del_5p15.33	0.993	1
Amp_10p15.3	Del_11p15.5	0.993	1
Amp_11q24.1	Amp_13q34	0.993	1
Amp_13q34	Del_5q34	0.993	1
Del_3q13.31	Del_5q34	0.993	1
Del_3q29	Del_4q34.3	0.993	1
Del_3q29	Del_7p22.3	0.993	1
Del_7p22.3	Del_8q24.3	0.993	1
Del_7p22.3	Del_22q13.31	0.993	1
ARID1A	11q-Amp	0.994	1
ARID1A	4p-Del	0.994	1
BRAF	PTEN	0.994	1
CREBZF	FUBP1	0.994	1
EGFR	Del_14q24.3	0.994	1
FSTL5	FUBP1	0.994	1
HTRA2	Del_6q24.3	0.994	1
IDH2	Del_4q34.3	0.994	1
NF1	Del_9p21.3	0.994	1
NF1	Del_22q13.31	0.994	1
PIK3CA	4q-Del	0.994	1
PRCP	14q-Del	0.994	1
PTEN	Del_14q24.3	0.994	1
SMARCA4	Del_1q43	0.994	1
SPANXE	Del_13q14.2	0.994	1
STK19	Amp_7q31.2	0.994	1
VAV3	Del_6p25.3	0.994	1
VAV3	Del_6q22.31	0.994	1
ZBTB20	ZNF709	0.994	1
DDX5	Del_11p15.5	0.994	1
7p-Amp	Amp_12q14.1	0.994	1
10p-Del	Amp_3q26.33	0.994	1
10q-Del	Del_6q24.3	0.994	1
11p-Del	Amp_8q24.13	0.994	1
15q-Del	18q-Del	0.994	1
15q-Del	Del_6p25.3	0.994	1
18p-Del	1p-Del	0.994	1
18p-Del	Del_14q24.3	0.994	1
4q-Del	Amp_12p13.32	0.994	1
4q-Del	Del_3q29	0.994	1
4q-Del	Del_19q13.41	0.994	1
9p-Del	Del_22q13.31	0.994	1
Amp_2p24.3	Amp_7q32.3	0.994	1
Amp_3q26.33	Del_6p25.3	0.994	1
Amp_3q26.33	Del_6q22.31	0.994	1
Amp_3q26.33	Del_9p23	0.994	1
Amp_3q26.33	Del_10q26.3	0.994	1
Amp_7p11.2	Del_9p23	0.994	1
Amp_8q24.13	Del_3q29	0.994	1
Amp_10p15.3	Del_5q34	0.994	1
Amp_Xp11.22	Del_11p15.5	0.994	1
Amp_Xp11.22	Del_13q14.2	0.994	1
Del_3q29	Del_6p25.3	0.994	1
Del_4q34.3	Del_11p15.1	0.994	1
Del_6q22.31	Del_8q24.3	0.994	1
Del_6q24.3	Del_Xq21.1	0.994	1
ATRX	Del_5q34	0.995	1
CIC	CREBZF	0.995	1
CIC	LRRC37A2	0.995	1
CREBZF	PIK3CA	0.995	1
CREBZF	Amp_4q12	0.995	1
EGFR	Amp_13q34	0.995	1
EIF1AX	Amp_17q25.1	0.995	1
FSTL5	13q-Del	0.995	1
FSTL5	Del_3q13.31	0.995	1
IDH2	TMEM216	0.995	1
IDH2	1p-Del	0.995	1
LRRC37A2	Amp_12p13.32	0.995	1
NF1	22q-Del	0.995	1
NOTCH1	PIK3R1	0.995	1
NOTCH1	TCF12	0.995	1
PTEN	Amp_7q32.3	0.995	1
SLC6A3	IRS4	0.995	1
VAV3	Del_12q12	0.995	1
ZBTB20	BCOR	0.995	1
BCOR	Amp_19p13.3	0.995	1
10p-Del	Del_6q24.3	0.995	1
4q-Del	Del_13q14.2	0.995	1
6q-Del	Xq-Del	0.995	1
6q-Del	Del_7p22.3	0.995	1
9q-Del	Del_4q34.3	0.995	1
Xq-Del	Del_3q13.31	0.995	1
Amp_4q12	Del_11p15.5	0.995	1
Amp_8q24.13	Del_5p15.33	0.995	1
Amp_10p15.3	Del_2q37.3	0.995	1
Amp_17q25.1	Del_Xq21.1	0.995	1
Del_2q37.3	Del_7p22.3	0.995	1
Del_3p21.31	Del_3q29	0.995	1
Del_3p21.31	Del_10q26.3	0.995	1
Del_3q13.31	Del_7p22.3	0.995	1
Del_6q22.31	Del_22q13.31	0.995	1
ATRX	Amp_10p15.3	0.996	1
CREBZF	14q-Del	0.996	1
DYNC1I1	22q-Del	0.996	1
FSTL5	PDGFRA	0.996	1
FUBP1	PIK3CA	0.996	1
HTRA2	Del_3q29	0.996	1
HTRA2	Del_6q22.31	0.996	1
HTRA2	Del_8q24.3	0.996	1
IDH1	Del_11p15.1	0.996	1
NF1	PRCP	0.996	1
NF1	TNFRSF9	0.996	1
NOTCH1	OR5T3	0.996	1
NOTCH1	ROBO3	0.996	1
NOTCH1	Amp_Xp11.22	0.996	1
OR5T3	STK19	0.996	1
OR5T3	TCF12	0.996	1
OR5T3	12q-Del	0.996	1
OR5T3	Amp_1q32.1	0.996	1
PIK3CA	Del_19q13.42	0.996	1
PIK3R1	Amp_3q26.33	0.996	1
PTEN	15q-Del	0.996	1
PTEN	Amp_3q26.33	0.996	1
STK19	ROBO3	0.996	1
TCF12	9q-Del	0.996	1
TMEM216	4p-Del	0.996	1
TP53	Del_6q24.3	0.996	1
TP53	Del_8q24.3	0.996	1
BCOR	Amp_12q14.1	0.996	1
DDX5	Amp_19p13.2	0.996	1
GAGE2B	Amp_8q24.13	0.996	1
IRS4	Amp_1q22	0.996	1
PLCG1	Amp_1q32.1	0.996	1
PLCG1	Amp_3q26.33	0.996	1
ROBO3	Amp_3q26.33	0.996	1
7p-Amp	Amp_13q34	0.996	1
8q-Amp	Del_3q29	0.996	1
13q-Del	Del_11p15.5	0.996	1
13q-Del	Del_22q13.31	0.996	1
14q-Del	18q-Del	0.996	1
4q-Del	Del_3p21.31	0.996	1
6q-Del	Del_22q13.31	0.996	1
9q-Del	Del_3q29	0.996	1
9q-Del	Del_8q24.3	0.996	1
Amp_1q22	Amp_2p24.3	0.996	1
Amp_12p13.32	Del_3p21.31	0.996	1
Amp_12q14.1	Amp_17q25.1	0.996	1
Amp_13q34	Del_6p25.3	0.996	1
Amp_19p13.3	Del_1p36.32	0.996	1
Amp_Xp11.22	Del_3q29	0.996	1
Del_3q13.31	Del_6p25.3	0.996	1
Del_3q29	Del_Xq21.1	0.996	1
Del_6q22.31	Del_10q26.3	0.996	1
Del_7p22.3	Del_9p23	0.996	1
Del_8q24.3	Del_Xq21.1	0.996	1
Del_9p23	Del_13q14.2	0.996	1
Del_10q26.3	Del_13q14.2	0.996	1
ATRX	Del_5p15.33	0.997	1
EGFR	22q-Del	0.997	1
EGFR	Amp_12q14.1	0.997	1
EIF1AX	Del_22q13.31	0.997	1
F13A1	18p-Del	0.997	1
F13A1	18q-Del	0.997	1
FUBP1	GAGE2B	0.997	1
FUBP1	9q-Del	0.997	1
HSPB8	PRNP	0.997	1
HSPB8	UBE2G2	0.997	1
HTRA2	Del_3q13.31	0.997	1
IDH1	Del_1p32.3	0.997	1
MYH2	14q-Del	0.997	1
NF1	Del_6q24.3	0.997	1
OR5T3	SLC6A3	0.997	1
PIK3CA	ZBTB20	0.997	1
PIK3R1	18q-Del	0.997	1
PRCP	PCDHAC2	0.997	1
PRCP	18p-Del	0.997	1
PRCP	18q-Del	0.997	1
PRCP	Del_6p25.3	0.997	1
PRNP	UBE2G2	0.997	1
PTEN	Amp_7q31.2	0.997	1
SPANXE	Amp_13q34	0.997	1
TMEM216	Amp_17q25.1	0.997	1
TNFRSF9	PCDHAC2	0.997	1
DDX5	FAM47C	0.997	1
DDX5	Amp_4q12	0.997	1
PLCG1	Del_9p21.3	0.997	1
10p-Amp	Amp_17q25.1	0.997	1
11q-Amp	Amp_17q25.1	0.997	1
7p-Amp	Amp_8q24.13	0.997	1
10q-Del	Del_6p25.3	0.997	1
10q-Del	Del_6q22.31	0.997	1
11p-Del	Amp_10p15.3	0.997	1
11p-Del	Del_22q13.31	0.997	1
14q-Del	Del_9p21.3	0.997	1
9p-Del	Del_2q37.3	0.997	1
9q-Del	Del_3q13.31	0.997	1
9q-Del	Del_9p21.3	0.997	1
Xq-Del	Amp_10p15.3	0.997	1
Amp_3q26.33	Del_9p21.3	0.997	1
Amp_4q12	Amp_8q24.13	0.997	1
Amp_4q12	Amp_Xp11.22	0.997	1
Amp_4q12	Del_Xq21.1	0.997	1
Amp_10p15.3	Del_7p22.3	0.997	1
Amp_11q24.1	Del_2q37.3	0.997	1
Amp_12p13.32	Del_2q37.3	0.997	1
Amp_12p13.32	Del_3q29	0.997	1
Amp_13q34	Del_3p21.31	0.997	1
Amp_13q34	Del_10q26.3	0.997	1
Amp_13q34	Del_12q12	0.997	1
Amp_Xp11.22	Del_11p15.1	0.997	1
Del_3p21.31	Del_6q24.3	0.997	1
Del_3p21.31	Del_13q14.2	0.997	1
Del_3q13.31	Del_10q26.3	0.997	1
Del_3q13.31	Del_Xq21.1	0.997	1
Del_4q34.3	Del_9p21.3	0.997	1
Del_6q24.3	Del_10q26.3	0.997	1
Del_9p21.3	Del_13q14.2	0.997	1
Del_12q12	Del_13q14.2	0.997	1
BRAF	STK19	0.998	1
BRAF	Del_3q13.31	0.998	1
CIC	PIK3CA	0.998	1
CREBZF	19q-Del	0.998	1
CREBZF	Del_14q24.3	0.998	1
DYNC1I1	IDH2	0.998	1
DYNC1I1	8q-Amp	0.998	1
DYNC1I1	Amp_19p13.3	0.998	1
EIF1AX	Amp_12p13.32	0.998	1
FSTL5	Del_7p22.3	0.998	1
HTRA2	6q-Del	0.998	1
IDH1	Amp_8q24.13	0.998	1
IDH1	Del_1p36.32	0.998	1
LRRC37A2	18p-Del	0.998	1
NF1	PTPN11	0.998	1
NF1	10p-Del	0.998	1
NF1	10q-Del	0.998	1
NF1	14q-Del	0.998	1
NF1	6q-Del	0.998	1
NF1	Del_6q22.31	0.998	1
NKX2-1	VAV3	0.998	1
NKX2-1	Amp_13q34	0.998	1
NOTCH1	FAM47C	0.998	1
OR5D18	Del_12q12	0.998	1
OR5T3	PDGFRA	0.998	1
PDGFRA	PLCG1	0.998	1
PDGFRA	Del_3p21.31	0.998	1
PDGFRA	Del_12q12	0.998	1
PDGFRA	Del_Xq21.1	0.998	1
PIK3CA	Del_19q13.41	0.998	1
PRCP	ZBTB20	0.998	1
PRCP	Amp_12q14.1	0.998	1
STK19	TMEM216	0.998	1
TCF12	TRERF1	0.998	1
TMEM216	12q-Del	0.998	1
TP53	Amp_11q24.1	0.998	1
VAV3	TRERF1	0.998	1
VAV3	6q-Del	0.998	1
ZNF709	FAM47C	0.998	1
PCDHAC2	IRS4	0.998	1
PLCG1	14q-Del	0.998	1
8q-Amp	Amp_4q12	0.998	1
10p-Del	6q-Del	0.998	1
10p-Del	Del_6p25.3	0.998	1
10p-Del	Del_6q22.31	0.998	1
10q-Del	6q-Del	0.998	1
11p-Del	Amp_Xp11.22	0.998	1
13q-Del	Del_4q34.3	0.998	1
14q-Del	Amp_3q26.33	0.998	1
18p-Del	Del_1p32.3	0.998	1
18q-Del	Del_19q13.42	0.998	1
22q-Del	Del_9p23	0.998	1
6q-Del	9p-Del	0.998	1
6q-Del	Del_8q24.3	0.998	1
6q-Del	Del_Xq21.1	0.998	1
Xq-Del	Del_7p22.3	0.998	1
Amp_2p24.3	Del_7p22.3	0.998	1
Amp_3q26.33	Del_14q24.3	0.998	1
Amp_4q12	Del_22q13.31	0.998	1
Amp_12q14.1	Amp_13q34	0.998	1
Amp_13q34	Del_1q43	0.998	1
Del_3p21.31	Del_4q34.3	0.998	1
Del_3q13.31	Del_22q13.31	0.998	1
Del_4q34.3	Del_5q34	0.998	1
Del_4q34.3	Del_11p15.5	0.998	1
Del_4q34.3	Del_13q14.2	0.998	1
Del_5p15.33	Del_9p23	0.998	1
Del_5p15.33	Del_9p21.3	0.998	1
Del_5q34	Del_11p15.5	0.998	1
Del_5q34	Del_12q12	0.998	1
Del_6p25.3	Del_14q24.3	0.998	1
ARID1A	PRCP	0.999	1
ATRX	8q-Amp	0.999	1
CIC	IDH1	0.999	1
CIC	15q-Del	0.999	1
CREBZF	4q-Del	0.999	1
CREBZF	9q-Del	0.999	1
DYNC1I1	MYH2	0.999	1
DYNC1I1	Amp_19p13.2	0.999	1
EGFR	14q-Del	0.999	1
EGFR	Amp_1q32.1	0.999	1
EGFR	Amp_19p13.2	0.999	1
FUBP1	IDH1	0.999	1
FUBP1	ZNF709	0.999	1
HTRA2	9q-Del	0.999	1
HTRA2	Xq-Del	0.999	1
HTRA2	Del_7p22.3	0.999	1
HTRA2	Del_Xq21.1	0.999	1
IDH1	Amp_12p13.32	0.999	1
IDH1	Del_11p15.5	0.999	1
LRRC37A2	TRERF1	0.999	1
LRRC37A2	18q-Del	0.999	1
LRRC37A2	9q-Del	0.999	1
OR5D18	TCF12	0.999	1
OR5D18	VAV3	0.999	1
OR5D18	12q-Del	0.999	1
OR5T3	ROBO3	0.999	1
OR5T3	Amp_2p24.3	0.999	1
OR5T3	Del_7p22.3	0.999	1
PDGFRA	PIK3CA	0.999	1
PDGFRA	Amp_12q14.1	0.999	1
PIK3R1	Del_19q13.41	0.999	1
PIK3R1	Del_19q13.42	0.999	1
PRCP	BCOR	0.999	1
PRCP	Amp_1q32.1	0.999	1
PRCP	Del_8q24.3	0.999	1
PTEN	PTPN11	0.999	1
PTEN	19p-Amp	0.999	1
PTEN	7p-Amp	0.999	1
PTEN	7q-Amp	0.999	1
PTEN	22q-Del	0.999	1
PTEN	Del_22q13.31	0.999	1
PTPN11	PLCG1	0.999	1
STK19	Amp_19p13.2	0.999	1
TCF12	TNFRSF9	0.999	1
TNFRSF9	Amp_1q32.1	0.999	1
VAV3	12q-Del	0.999	1
ZBTB20	Del_1p36.32	0.999	1
ZBTB20	Del_19q13.41	0.999	1
ZBTB20	Del_19q13.42	0.999	1
BCOR	Del_8q24.3	0.999	1
PCDHAC2	6q-Del	0.999	1
PCDHAC2	Amp_1q32.1	0.999	1
PCDHAC2	Del_6q22.31	0.999	1
IRS4	ROBO3	0.999	1
IRS4	Del_6q24.3	0.999	1
PLCG1	Amp_7p11.2	0.999	1
PLCG1	Del_9p23	0.999	1
PLCG1	Del_10q26.3	0.999	1
ROBO3	Amp_2p24.3	0.999	1
ROBO3	Del_7p22.3	0.999	1
10p-Amp	Del_2q37.3	0.999	1
10p-Amp	Del_5q34	0.999	1
11q-Amp	18q-Del	0.999	1
7p-Amp	Amp_1q32.1	0.999	1
7p-Amp	Amp_3q26.33	0.999	1
7p-Amp	Del_9p21.3	0.999	1
8q-Amp	Del_4q34.3	0.999	1
10p-Del	Amp_12q14.1	0.999	1
10q-Del	Amp_12q14.1	0.999	1
11p-Del	Del_5p15.33	0.999	1
13q-Del	4p-Del	0.999	1
13q-Del	4q-Del	0.999	1
14q-Del	Del_22q13.31	0.999	1
15q-Del	Del_1p32.3	0.999	1
18q-Del	Del_1p36.32	0.999	1
18q-Del	Del_19q13.41	0.999	1
22q-Del	Del_6q24.3	0.999	1
22q-Del	Del_11p15.5	0.999	1
4p-Del	Del_13q14.2	0.999	1
4p-Del	Del_19q13.42	0.999	1
6q-Del	Del_10q26.3	0.999	1
9p-Del	Del_3p21.31	0.999	1
9p-Del	Del_7p22.3	0.999	1
9p-Del	Del_10q26.3	0.999	1
9q-Del	Xq-Del	0.999	1
9q-Del	Del_7p22.3	0.999	1
9q-Del	Del_Xq21.1	0.999	1
Xq-Del	Del_1q43	0.999	1
Xq-Del	Del_6q22.31	0.999	1
Xq-Del	Del_6q24.3	0.999	1
Amp_1q22	Amp_7q32.3	0.999	1
Amp_1q32.1	Amp_3q26.33	0.999	1
Amp_1q32.1	Amp_7q31.2	0.999	1
Amp_1q32.1	Amp_7q32.3	0.999	1
Amp_1q32.1	Amp_19p13.2	0.999	1
Amp_1q32.1	Del_9p23	0.999	1
Amp_3q26.33	Amp_7q31.2	0.999	1
Amp_3q26.33	Amp_7q32.3	0.999	1
Amp_7p11.2	Amp_12q14.1	0.999	1
Amp_7q32.3	Del_9p21.3	0.999	1
Amp_8q24.13	Del_5q34	0.999	1
Amp_8q24.13	Del_11p15.5	0.999	1
Amp_10p15.3	Amp_12p13.32	0.999	1
Amp_12p13.32	Del_4q34.3	0.999	1
Amp_12p13.32	Del_5q34	0.999	1
Amp_12p13.32	Del_22q13.31	0.999	1
Del_2q37.3	Del_3q13.31	0.999	1
Del_2q37.3	Del_6p25.3	0.999	1
Del_3p21.31	Del_9p23	0.999	1
Del_3p21.31	Del_9p21.3	0.999	1
Del_3p21.31	Del_22q13.31	0.999	1
Del_3q13.31	Del_9p21.3	0.999	1
Del_3q29	Del_13q14.2	0.999	1
Del_5q34	Del_11p15.1	0.999	1
Del_7p22.3	Del_Xq21.1	0.999	1
Del_9p23	Del_22q13.31	0.999	1
Del_11p15.5	Del_22q13.31	0.999	1
Del_11p15.1	Del_13q14.2	0.999	1
Del_13q14.2	Del_22q13.31	0.999	1
ATRX	IDH1	1	1
ATRX	PRNP	1	1
ATRX	TP53	1	1
ATRX	UBE2G2	1	1
ATRX	TRERF1	1	1
ATRX	11p-Del	1	1
ATRX	Amp_8q24.13	1	1
ATRX	Amp_12p13.32	1	1
ATRX	Amp_Xp11.22	1	1
ATRX	Del_2q37.3	1	1
ATRX	Del_11p15.5	1	1
ATRX	Del_11p15.1	1	1
CIC	FUBP1	1	1
CIC	HSPB8	1	1
CIC	NOTCH1	1	1
CIC	19q-Del	1	1
CIC	1p-Del	1	1
CIC	4p-Del	1	1
CIC	4q-Del	1	1
CIC	Del_1p36.32	1	1
CIC	Del_1p32.3	1	1
CIC	Del_19q13.41	1	1
CIC	Del_19q13.42	1	1
CREBZF	IDH1	1	1
DYNC1I1	19p-Amp	1	1
DYNC1I1	Del_9p21.3	1	1
EGFR	PTEN	1	1
EGFR	19p-Amp	1	1
EGFR	7p-Amp	1	1
EGFR	7q-Amp	1	1
EGFR	10p-Del	1	1
EGFR	10q-Del	1	1
EGFR	Amp_7p11.2	1	1
EGFR	Amp_7q31.2	1	1
EGFR	Amp_7q32.3	1	1
EGFR	Del_9p21.3	1	1
EGFR	Del_10q26.3	1	1
EIF1AX	IDH1	1	1
EIF1AX	TP53	1	1
EIF1AX	Del_19q13.42	1	1
F13A1	IDH1	1	1
F13A1	LRRC37A2	1	1
F13A1	Del_19q13.41	1	1
F13A1	Del_19q13.42	1	1
FUBP1	NOTCH1	1	1
FUBP1	PIK3R1	1	1
FUBP1	19q-Del	1	1
FUBP1	1p-Del	1	1
FUBP1	Del_1p36.32	1	1
FUBP1	Del_1p32.3	1	1
FUBP1	Del_19q13.41	1	1
FUBP1	Del_19q13.42	1	1
HSPB8	IDH1	1	1
HSPB8	19q-Del	1	1
HSPB8	1p-Del	1	1
HSPB8	Amp_19p13.3	1	1
HSPB8	Del_1p36.32	1	1
HSPB8	Del_1p32.3	1	1
HSPB8	Del_19q13.41	1	1
HSPB8	Del_19q13.42	1	1
HTRA2	STK19	1	1
HTRA2	TMEM216	1	1
IDH1	NKX2-1	1	1
IDH1	NOTCH1	1	1
IDH1	OR5D18	1	1
IDH1	PRNP	1	1
IDH1	SMARCA4	1	1
IDH1	SPANXE	1	1
IDH1	TP53	1	1
IDH1	UBE2G2	1	1
IDH1	ZNF709	1	1
IDH1	DDX5	1	1
IDH1	ROBO3	1	1
IDH1	TRERF1	1	1
IDH1	10p-Amp	1	1
IDH1	11q-Amp	1	1
IDH1	12q-Del	1	1
IDH1	19q-Del	1	1
IDH1	1p-Del	1	1
IDH1	Amp_2p24.3	1	1
IDH1	Amp_10p15.3	1	1
IDH1	Amp_11q24.1	1	1
IDH1	Amp_Xp11.22	1	1
IDH1	Del_1q43	1	1
IDH1	Del_5q34	1	1
IDH1	Del_19q13.41	1	1
IDH1	Del_19q13.42	1	1
LRRC37A2	Del_18q23	1	1
NF1	Del_6p25.3	1	1
NKX2-1	TRERF1	1	1
NKX2-1	Del_1q43	1	1
NOTCH1	19q-Del	1	1
NOTCH1	1p-Del	1	1
NOTCH1	Del_1p36.32	1	1
NOTCH1	Del_1p32.3	1	1
NOTCH1	Del_19q13.41	1	1
NOTCH1	Del_19q13.42	1	1
OR5D18	TMEM216	1	1
PDGFRA	Amp_4q12	1	1
PIK3CA	19q-Del	1	1
PIK3CA	1p-Del	1	1
PIK3CA	Del_1p36.32	1	1
PIK3CA	Del_1p32.3	1	1
PRCP	IRS4	1	1
PRCP	Del_14q24.3	1	1
PRNP	TP53	1	1
PRNP	Del_18q23	1	1
PTEN	10p-Del	1	1
PTEN	10q-Del	1	1
PTEN	14q-Del	1	1
PTEN	9p-Del	1	1
PTEN	Amp_1q32.1	1	1
PTEN	Amp_7p11.2	1	1
PTEN	Amp_19p13.2	1	1
PTEN	Del_9p23	1	1
PTEN	Del_9p21.3	1	1
PTEN	Del_10q26.3	1	1
SMARCA4	UBE2G2	1	1
SPANXE	Amp_19p13.3	1	1
STK19	19p-Amp	1	1
STK19	Amp_2p24.3	1	1
TP53	UBE2G2	1	1
TP53	TRERF1	1	1
TP53	10p-Amp	1	1
TP53	8q-Amp	1	1
TP53	11p-Del	1	1
TP53	12q-Del	1	1
TP53	Amp_2p24.3	1	1
TP53	Amp_8q24.13	1	1
TP53	Amp_10p15.3	1	1
TP53	Amp_12p13.32	1	1
TP53	Del_2q37.3	1	1
TP53	Del_5p15.33	1	1
TP53	Del_5q34	1	1
TP53	Del_11p15.5	1	1
TP53	Del_11p15.1	1	1
TP53	Del_12q12	1	1
UBE2G2	PCDHAC2	1	1
UBE2G2	Amp_8q24.13	1	1
UBE2G2	Amp_12p13.32	1	1
UBE2G2	Del_5q34	1	1
ZBTB20	19q-Del	1	1
ZBTB20	1p-Del	1	1
ZBTB20	Del_1p32.3	1	1
PCDHAC2	Del_6q24.3	1	1
PLCG1	10p-Del	1	1
PLCG1	10q-Del	1	1
TRERF1	9q-Del	1	1
10p-Amp	Amp_10p15.3	1	1
10p-Amp	Del_4q34.3	1	1
10p-Amp	Del_7p22.3	1	1
11q-Amp	Amp_11q24.1	1	1
19p-Amp	7p-Amp	1	1
19p-Amp	7q-Amp	1	1
19p-Amp	10p-Del	1	1
19p-Amp	10q-Del	1	1
19p-Amp	Amp_7p11.2	1	1
19p-Amp	Amp_7q31.2	1	1
19p-Amp	Amp_7q32.3	1	1
19p-Amp	Amp_19p13.3	1	1
19p-Amp	Amp_19p13.2	1	1
19p-Amp	Del_9p21.3	1	1
19p-Amp	Del_10q26.3	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	10p-Del	1	1
7p-Amp	10q-Del	1	1
7p-Amp	Amp_7p11.2	1	1
7p-Amp	Amp_7q31.2	1	1
7p-Amp	Amp_7q32.3	1	1
7p-Amp	Amp_19p13.2	1	1
7p-Amp	Del_10q26.3	1	1
7q-Amp	10p-Del	1	1
7q-Amp	10q-Del	1	1
7q-Amp	Amp_1q32.1	1	1
7q-Amp	Amp_3q26.33	1	1
7q-Amp	Amp_7p11.2	1	1
7q-Amp	Amp_7q31.2	1	1
7q-Amp	Amp_7q32.3	1	1
7q-Amp	Amp_19p13.2	1	1
7q-Amp	Del_9p21.3	1	1
7q-Amp	Del_10q26.3	1	1
8q-Amp	Amp_8q24.13	1	1
10p-Del	10q-Del	1	1
10p-Del	14q-Del	1	1
10p-Del	22q-Del	1	1
10p-Del	9p-Del	1	1
10p-Del	Amp_1q32.1	1	1
10p-Del	Amp_7p11.2	1	1
10p-Del	Amp_7q31.2	1	1
10p-Del	Amp_7q32.3	1	1
10p-Del	Amp_19p13.2	1	1
10p-Del	Del_9p23	1	1
10p-Del	Del_9p21.3	1	1
10p-Del	Del_10q26.3	1	1
10p-Del	Del_14q24.3	1	1
10p-Del	Del_22q13.31	1	1
10q-Del	14q-Del	1	1
10q-Del	22q-Del	1	1
10q-Del	9p-Del	1	1
10q-Del	Amp_1q32.1	1	1
10q-Del	Amp_7p11.2	1	1
10q-Del	Amp_7q31.2	1	1
10q-Del	Amp_7q32.3	1	1
10q-Del	Amp_19p13.2	1	1
10q-Del	Del_9p23	1	1
10q-Del	Del_9p21.3	1	1
10q-Del	Del_10q26.3	1	1
10q-Del	Del_14q24.3	1	1
10q-Del	Del_22q13.31	1	1
11p-Del	12q-Del	1	1
11p-Del	Amp_12p13.32	1	1
11p-Del	Del_2q37.3	1	1
11p-Del	Del_3p21.31	1	1
11p-Del	Del_3q29	1	1
11p-Del	Del_11p15.5	1	1
11p-Del	Del_11p15.1	1	1
11p-Del	Del_12q12	1	1
12q-Del	Amp_13q34	1	1
12q-Del	Del_3p21.31	1	1
12q-Del	Del_5q34	1	1
12q-Del	Del_11p15.5	1	1
12q-Del	Del_11p15.1	1	1
12q-Del	Del_12q12	1	1
13q-Del	22q-Del	1	1
13q-Del	Del_3p21.31	1	1
13q-Del	Del_13q14.2	1	1
14q-Del	22q-Del	1	1
14q-Del	6q-Del	1	1
14q-Del	Del_6p25.3	1	1
14q-Del	Del_6q22.31	1	1
14q-Del	Del_6q24.3	1	1
14q-Del	Del_10q26.3	1	1
14q-Del	Del_14q24.3	1	1
18p-Del	18q-Del	1	1
18p-Del	Del_18q23	1	1
18q-Del	19q-Del	1	1
18q-Del	1p-Del	1	1
18q-Del	Del_1p32.3	1	1
18q-Del	Del_18q23	1	1
19q-Del	1p-Del	1	1
19q-Del	4p-Del	1	1
19q-Del	4q-Del	1	1
19q-Del	Del_1p36.32	1	1
19q-Del	Del_1p32.3	1	1
19q-Del	Del_19q13.41	1	1
19q-Del	Del_19q13.42	1	1
1p-Del	4p-Del	1	1
1p-Del	4q-Del	1	1
1p-Del	Del_1p36.32	1	1
1p-Del	Del_1p32.3	1	1
1p-Del	Del_19q13.41	1	1
1p-Del	Del_19q13.42	1	1
22q-Del	6q-Del	1	1
22q-Del	Amp_4q12	1	1
22q-Del	Del_3p21.31	1	1
22q-Del	Del_3q29	1	1
22q-Del	Del_6p25.3	1	1
22q-Del	Del_6q22.31	1	1
22q-Del	Del_9p21.3	1	1
22q-Del	Del_10q26.3	1	1
22q-Del	Del_13q14.2	1	1
22q-Del	Del_14q24.3	1	1
22q-Del	Del_22q13.31	1	1
4p-Del	4q-Del	1	1
4p-Del	Del_1p36.32	1	1
4p-Del	Del_1p32.3	1	1
4p-Del	Del_4q34.3	1	1
4p-Del	Del_19q13.41	1	1
4q-Del	9q-Del	1	1
4q-Del	Amp_4q12	1	1
4q-Del	Del_1p36.32	1	1
4q-Del	Del_1p32.3	1	1
4q-Del	Del_4q34.3	1	1
6q-Del	Del_6p25.3	1	1
6q-Del	Del_6q22.31	1	1
6q-Del	Del_6q24.3	1	1
6q-Del	Del_9p23	1	1
6q-Del	Del_9p21.3	1	1
6q-Del	Del_14q24.3	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_1q32.1	1	1
9p-Del	Del_3q13.31	1	1
9p-Del	Del_6q22.31	1	1
9p-Del	Del_6q24.3	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9q-Del	Del_3p21.31	1	1
9q-Del	Del_9p23	1	1
Xq-Del	Del_Xq21.1	1	1
Amp_1q32.1	Amp_7p11.2	1	1
Amp_1q32.1	Del_9p21.3	1	1
Amp_1q32.1	Del_10q26.3	1	1
Amp_3q26.33	Amp_7p11.2	1	1
Amp_3q26.33	Del_3p21.31	1	1
Amp_4q12	Del_3q29	1	1
Amp_4q12	Del_4q34.3	1	1
Amp_7p11.2	Amp_7q31.2	1	1
Amp_7p11.2	Amp_7q32.3	1	1
Amp_7p11.2	Amp_19p13.2	1	1
Amp_7p11.2	Del_9p21.3	1	1
Amp_7p11.2	Del_10q26.3	1	1
Amp_7q31.2	Amp_7q32.3	1	1
Amp_7q31.2	Amp_19p13.2	1	1
Amp_7q31.2	Del_9p21.3	1	1
Amp_7q31.2	Del_10q26.3	1	1
Amp_7q32.3	Amp_19p13.2	1	1
Amp_7q32.3	Del_10q26.3	1	1
Amp_8q24.13	Amp_10p15.3	1	1
Amp_8q24.13	Amp_12p13.32	1	1
Amp_8q24.13	Amp_Xp11.22	1	1
Amp_10p15.3	Del_4q34.3	1	1
Amp_12p13.32	Del_5p15.33	1	1
Amp_12p13.32	Del_11p15.5	1	1
Amp_12p13.32	Del_11p15.1	1	1
Amp_12q14.1	Del_10q26.3	1	1
Amp_13q34	Del_11p15.5	1	1
Amp_13q34	Del_11p15.1	1	1
Amp_13q34	Del_13q14.2	1	1
Amp_19p13.3	Amp_19p13.2	1	1
Amp_19p13.2	Del_9p21.3	1	1
Amp_19p13.2	Del_10q26.3	1	1
Del_1p36.32	Del_1p32.3	1	1
Del_1p36.32	Del_19q13.41	1	1
Del_1p36.32	Del_19q13.42	1	1
Del_1p32.3	Del_19q13.41	1	1
Del_1p32.3	Del_19q13.42	1	1
Del_2q37.3	Del_3p21.31	1	1
Del_2q37.3	Del_11p15.5	1	1
Del_2q37.3	Del_11p15.1	1	1
Del_3p21.31	Del_3q13.31	1	1
Del_3p21.31	Del_11p15.5	1	1
Del_3p21.31	Del_11p15.1	1	1
Del_3p21.31	Del_12q12	1	1
Del_3q13.31	Del_3q29	1	1
Del_3q13.31	Del_9p23	1	1
Del_3q29	Del_11p15.5	1	1
Del_3q29	Del_11p15.1	1	1
Del_3q29	Del_22q13.31	1	1
Del_5p15.33	Del_11p15.5	1	1
Del_5p15.33	Del_11p15.1	1	1
Del_6p25.3	Del_6q22.31	1	1
Del_6p25.3	Del_6q24.3	1	1
Del_6p25.3	Del_8q24.3	1	1
Del_6p25.3	Del_9p21.3	1	1
Del_6p25.3	Del_10q26.3	1	1
Del_6p25.3	Del_22q13.31	1	1
Del_6q22.31	Del_6q24.3	1	1
Del_6q22.31	Del_9p23	1	1
Del_6q22.31	Del_9p21.3	1	1
Del_6q22.31	Del_14q24.3	1	1
Del_6q24.3	Del_9p23	1	1
Del_6q24.3	Del_9p21.3	1	1
Del_6q24.3	Del_14q24.3	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_10q26.3	1	1
Del_9p21.3	Del_10q26.3	1	1
Del_9p21.3	Del_14q24.3	1	1
Del_9p21.3	Del_22q13.31	1	1
Del_10q26.3	Del_14q24.3	1	1
Del_10q26.3	Del_22q13.31	1	1
Del_11p15.5	Del_11p15.1	1	1
Del_11p15.5	Del_12q12	1	1
Del_11p15.5	Del_13q14.2	1	1
Del_11p15.1	Del_12q12	1	1
Del_19q13.41	Del_19q13.42	1	1
TP53	1p-Del	1.11e-26	1
FUBP1	TP53	1.28e-06	1
1p-Del	Del_10q26.3	1.31e-07	1
Amp_7p11.2	Del_19q13.42	1.32e-05	1
IDH1	Amp_7p11.2	1.46e-10	1
IDH1	IDH2	1.47e-08	1
TP53	Del_1p32.3	1.59e-27	1
10p-Del	Del_19q13.41	1.61e-06	1
Del_1p32.3	Del_11p15.5	1.64e-06	1
ATRX	Del_1p36.32	1.72e-19	1
TP53	19q-Del	1.7e-18	1
TP53	10q-Del	1.88e-07	1
IDH1	10q-Del	1.91e-21	1
1p-Del	Amp_8q24.13	1.92e-05	1
1p-Del	Del_6q22.31	1.92e-05	1
ATRX	10p-Del	1.94e-08	1
10p-Del	Del_19q13.42	1.94e-08	1
IDH1	NF1	2.34e-05	1
IDH1	22q-Del	2.34e-05	1
CIC	TP53	2.43e-18	1
19q-Del	Del_10q26.3	2.49e-08	1
ATRX	19q-Del	2.58e-12	1
Del_10q26.3	Del_19q13.41	2.64e-07	1
Del_1p32.3	Del_11p15.1	2.8e-05	1
ATRX	10q-Del	2.98e-07	1
10q-Del	Del_19q13.42	2.98e-07	1
IDH1	PTEN	3.01e-09	1
TP53	10p-Del	3.04e-08	1
Del_1p32.3	Del_10q26.3	3.17e-05	1
Del_1p36.32	Del_6q24.3	3.21e-05	1
EGFR	IDH1	3.27e-10	1
TP53	Del_19q13.41	3.35e-09	1
19q-Del	Del_9p21.3	3.37e-05	1
ATRX	Del_19q13.42	3.3e-05	1
Del_10q26.3	Del_19q13.42	3.71e-07	1
1p-Del	Del_11p15.5	4.21e-06	1
10q-Del	19q-Del	4.71e-06	1
ATRX	1p-Del	4.86e-20	1
ATRX	Del_19q13.41	4.92e-06	1
CIC	Del_10q26.3	5.39e-06	1
1p-Del	Del_11p15.1	5.87e-05	1
1p-Del	Del_22q13.31	5.87e-05	1
TP53	Del_1p36.32	6.08e-27	1
1p-Del	Del_6q24.3	6.16e-06	1
IDH1	Del_10q26.3	6.35e-12	1
EGFR	TP53	6.6e-05	1
PTEN	TP53	6.88e-05	1
IDH1	10p-Del	6.93e-23	1
10p-Del	19q-Del	7.11e-06	1
ATRX	CIC	7.29e-12	1
IDH1	Amp_1q32.1	7.35e-06	1
IDH1	14q-Del	7.68e-05	1
1p-Del	Del_9p21.3	8.15e-06	1
ATRX	Del_1p32.3	8.19e-22	1
IDH1	Del_9p21.3	8.32e-06	1
ATRX	EGFR	8.3e-05	1
Amp_8q24.13	Del_1p32.3	8.41e-06	1
TP53	Del_19q13.42	9.04e-07	1
ATRX	FUBP1	9.26e-06	1
10q-Del	Del_19q13.41	9.38e-07	1
