[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"        "-oTPAAD-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/PAAD-TP/11588537/PAAD-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/PAAD-TP/11544841/transformed.cor.cli.txt"

nPatients in clinical file=185, in cluster file=184, common to both=184
[1]  63 184
[1] "AMP PEAK  1(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           13                           171 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           13                           171 
[1] "AMP PEAK  2(1P12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE 
                         27                         157 
  AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE 
                         27                         157 
[1] "AMP PEAK  3(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                           62                           122 
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                           62                           122 
[1] "AMP PEAK  4(2Q36.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE 
                           26                           158 
  AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE 
                           26                           158 
[1] "AMP PEAK  5(3P12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE 
                           12                           172 
  AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE 
                           12                           172 
[1] "AMP PEAK  6(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                           32                           152 
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                           32                           152 
[1] "AMP PEAK  7(4P16.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                           15                           169 
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                           15                           169 
[1] "AMP PEAK  8(6P21.31) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE 
                            12                            172 
  AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE 
                            12                            172 
[1] "AMP PEAK  9(7Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE 
                           56                           128 
  AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE 
                           56                           128 
[1] "AMP PEAK 10(8P11.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE 
                            34                            150 
  AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE 
                            34                            150 
[1] "AMP PEAK 11(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE 
                            34                            150 
  AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE 
                            34                            150 
[1] "AMP PEAK 12(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                            74                            110 
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                            74                            110 
[1] "AMP PEAK 13(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE 
                           24                           160 
  AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE 
                           24                           160 
[1] "AMP PEAK 14(12P13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE 
                             39                             145 
  AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE 
                             39                             145 
[1] "AMP PEAK 15(12P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE 
                             43                             141 
  AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE 
                             43                             141 
[1] "AMP PEAK 16(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE 
                          29                          155 
  AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE 
                          29                          155 
[1] "AMP PEAK 17(15Q26.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE 
                            22                            162 
  AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE 
                            22                            162 
[1] "AMP PEAK 18(17P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE 
                            15                            169 
  AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE 
                            15                            169 
[1] "AMP PEAK 19(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE 
                          31                          153 
  AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE 
                          31                          153 
[1] "AMP PEAK 20(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE 
                            56                            128 
  AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE 
                            56                            128 
[1] "AMP PEAK 21(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            18                            166 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            18                            166 
[1] "AMP PEAK 22(19Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE 
                            47                            137 
  AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE 
                            47                            137 
[1] "AMP PEAK 23(20P11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE 
                             38                             146 
  AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE 
                             38                             146 
[1] "AMP PEAK 24(XP22.11) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE 
                            11                            173 
  AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE 
                            11                            173 
[1] "AMP PEAK 25(XQ27.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE 
                           21                           163 
  AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE 
                           21                           163 
[1] "DEL PEAK  1(1P36.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                            52                            132 
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                            52                            132 
[1] "DEL PEAK  2(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE 
                            68                            116 
  DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE 
                            68                            116 
[1] "DEL PEAK  3(2Q14.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE 
                            9                           175 
  DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE 
                            9                           175 
[1] "DEL PEAK  4(3P21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE 
                            51                            133 
  DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE 
                            51                            133 
[1] "DEL PEAK  5(4P15.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE 
                            30                            154 
  DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE 
                            30                            154 
[1] "DEL PEAK  6(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE 
                           27                           157 
  DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE 
                           27                           157 
[1] "DEL PEAK  7(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE 
                           35                           149 
  DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE 
                           35                           149 
[1] "DEL PEAK  8(5Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE 
                           35                           149 
  DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE 
                           35                           149 
[1] "DEL PEAK  9(6P25.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE 
                           74                           110 
  DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE 
                           74                           110 
[1] "DEL PEAK 10(6P22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE 
                           70                           114 
  DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE 
                           70                           114 
[1] "DEL PEAK 11(6Q25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE 
                           91                            93 
  DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE 
                           91                            93 
[1] "DEL PEAK 12(7Q36.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE 
                           15                           169 
  DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE 
                           15                           169 
[1] "DEL PEAK 13(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE 
                           58                           126 
  DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE 
                           58                           126 
[1] "DEL PEAK 14(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE 
                          116                            68 
  DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE 
                          116                            68 
[1] "DEL PEAK 15(9Q22.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE 
                            47                            137 
  DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE 
                            47                            137 
[1] "DEL PEAK 16(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE 
                            41                            143 
  DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE 
                            41                            143 
[1] "DEL PEAK 17(10Q23.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE 
                             35                             149 
  DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE 
                             35                             149 
[1] "DEL PEAK 18(11P15.4) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE 
                            29                            155 
  DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE 
                            29                            155 
[1] "DEL PEAK 19(12P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE 
                            29                            155 
  DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE 
                            29                            155 
[1] "DEL PEAK 20(12Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE 
                          25                          159 
  DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE 
                          25                          159 
[1] "DEL PEAK 21(12Q21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE 
                             44                             140 
  DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE 
                             44                             140 
[1] "DEL PEAK 22(12Q24.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE 
                             43                             141 
  DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE 
                             43                             141 
[1] "DEL PEAK 23(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE 
                            20                            164 
  DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE 
                            20                            164 
[1] "DEL PEAK 24(14Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE 
                            20                            164 
  DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE 
                            20                            164 
[1] "DEL PEAK 25(15Q15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                            36                            148 
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                            36                            148 
[1] "DEL PEAK 26(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE 
                            19                            165 
  DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE 
                            19                            165 
[1] "DEL PEAK 27(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE 
                          89                           95 
  DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE 
                          89                           95 
[1] "DEL PEAK 28(17Q22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE 
                          49                          135 
  DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE 
                          49                          135 
[1] "DEL PEAK 29(18P11.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE 
                             54                             130 
  DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE 
                             54                             130 
[1] "DEL PEAK 30(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE 
                           126                             58 
  DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE 
                           126                             58 
[1] "DEL PEAK 31(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE 
                            36                            148 
  DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE 
                            36                            148 
[1] "DEL PEAK 32(19P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE 
                            28                            156 
  DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE 
                            28                            156 
[1] "DEL PEAK 33(19Q13.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE 
                             22                             162 
  DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE 
                             22                             162 
[1] "DEL PEAK 34(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE 
                            62                            122 
  DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE 
                            62                            122 
[1] "DEL PEAK 35(22Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE 
                             60                             124 
  DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE 
                             60                             124 
[1] "DEL PEAK 36(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE 
                             62                             122 
  DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE 
                             62                             122 
[1] "DEL PEAK 37(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE 
                           29                           155 
  DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE 
                           29                           155 
[1] "DEL PEAK 38(XQ11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE 
                           23                           161 
  DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE 
                           23                           161 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 184 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 184 columns, 0 survival variables, and 10 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=5, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        6      3      4
  AMP PEAK  1(1P34.2) WILD-TYPE     79     72     20
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           6                            79
  CLUS_2                           3                            72
  CLUS_3                           4                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        4      2      2
  AMP PEAK  1(1P34.2) WILD-TYPE     66     40     31
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           4                            66
  CLUS_2                           2                            40
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED        1      2      3      0      0
  AMP PEAK  1(1P34.2) WILD-TYPE     32     19     14     21     13
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           1                            32
  CLUS_2                           2                            19
  CLUS_3                           3                            14
  CLUS_4                           0                            21
  CLUS_5                           0                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P34.2) MUTATED        0      2      1      3      0
  AMP PEAK  1(1P34.2) WILD-TYPE     20     19     29     13     18
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           0                            20
  CLUS_2                           2                            19
  CLUS_3                           1                            29
  CLUS_4                           3                            13
  CLUS_5                           0                            18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        5      3      4
  AMP PEAK  1(1P34.2) WILD-TYPE     78     45     42
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           5                            78
  CLUS_2                           3                            45
  CLUS_3                           4                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        3      8      1
  AMP PEAK  1(1P34.2) WILD-TYPE     71     67     27
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           3                            71
  CLUS_2                           8                            67
  CLUS_3                           1                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P34.2) MUTATED        6      2      2      2
  AMP PEAK  1(1P34.2) WILD-TYPE     63     38     33     31
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           6                            63
  CLUS_2                           2                            38
  CLUS_3                           2                            33
  CLUS_4                           2                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        8      2      2
  AMP PEAK  1(1P34.2) WILD-TYPE     94     40     31
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           8                            94
  CLUS_2                           2                            40
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        5      3      4
  AMP PEAK  1(1P34.2) WILD-TYPE     64     64     33
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           5                            64
  CLUS_2                           3                            64
  CLUS_3                           4                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P34.2) MUTATED        8      3      1
  AMP PEAK  1(1P34.2) WILD-TYPE     78     44     39
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           8                            78
  CLUS_2                           3                            44
  CLUS_3                           1                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1P12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       10     13      4
  AMP PEAK  2(1P12) WILD-TYPE     75     62     20
D2V1, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        10                          75
  CLUS_2                        13                          62
  CLUS_3                         4                          20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       11      6      4
  AMP PEAK  2(1P12) WILD-TYPE     59     36     29
D2V2, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        11                          59
  CLUS_2                         6                          36
  CLUS_3                         4                          29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P12) MUTATED        7      3      4      0      1
  AMP PEAK  2(1P12) WILD-TYPE     26     18     13     21     12
D2V3, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                         7                          26
  CLUS_2                         3                          18
  CLUS_3                         4                          13
  CLUS_4                         0                          21
  CLUS_5                         1                          12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P12) MUTATED        3      3      5      4      0
  AMP PEAK  2(1P12) WILD-TYPE     17     18     25     12     18
D2V4, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                         3                          17
  CLUS_2                         3                          18
  CLUS_3                         5                          25
  CLUS_4                         4                          12
  CLUS_5                         0                          18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       13      8      3
  AMP PEAK  2(1P12) WILD-TYPE     70     40     43
D2V5, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        13                          70
  CLUS_2                         8                          40
  CLUS_3                         3                          43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED        9     13      2
  AMP PEAK  2(1P12) WILD-TYPE     65     62     26
D2V6, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                         9                          65
  CLUS_2                        13                          62
  CLUS_3                         2                          26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1P12) MUTATED       11      7      4      2
  AMP PEAK  2(1P12) WILD-TYPE     58     33     31     31
D2V7, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        11                          58
  CLUS_2                         7                          33
  CLUS_3                         4                          31
  CLUS_4                         2                          31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       14      8      2
  AMP PEAK  2(1P12) WILD-TYPE     88     34     31
D2V8, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        14                          88
  CLUS_2                         8                          34
  CLUS_3                         2                          31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       10      7      7
  AMP PEAK  2(1P12) WILD-TYPE     59     60     30
D2V9, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        10                          59
  CLUS_2                         7                          60
  CLUS_3                         7                          30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P12) MUTATED       12     10      2
  AMP PEAK  2(1P12) WILD-TYPE     74     37     38
D2V10, multiclass
        clus
vv       AMP PEAK  2(1P12) MUTATED AMP PEAK  2(1P12) WILD-TYPE
  CLUS_1                        12                          74
  CLUS_2                        10                          37
  CLUS_3                         2                          38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       18     35      9
  AMP PEAK  3(1Q21.3) WILD-TYPE     67     40     15
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          18                            67
  CLUS_2                          35                            40
  CLUS_3                           9                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       34      7      6
  AMP PEAK  3(1Q21.3) WILD-TYPE     36     35     27
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          34                            36
  CLUS_2                           7                            35
  CLUS_3                           6                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED       14      7      7      3      2
  AMP PEAK  3(1Q21.3) WILD-TYPE     19     14     10     18     11
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          14                            19
  CLUS_2                           7                            14
  CLUS_3                           7                            10
  CLUS_4                           3                            18
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED        8      7      7      8      3
  AMP PEAK  3(1Q21.3) WILD-TYPE     12     14     23      8     15
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                           8                            12
  CLUS_2                           7                            14
  CLUS_3                           7                            23
  CLUS_4                           8                             8
  CLUS_5                           3                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       36     17      6
  AMP PEAK  3(1Q21.3) WILD-TYPE     47     31     40
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          36                            47
  CLUS_2                          17                            31
  CLUS_3                           6                            40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       22     33      4
  AMP PEAK  3(1Q21.3) WILD-TYPE     52     42     24
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          22                            52
  CLUS_2                          33                            42
  CLUS_3                           4                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q21.3) MUTATED       34     13      6      6
  AMP PEAK  3(1Q21.3) WILD-TYPE     35     27     29     27
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          34                            35
  CLUS_2                          13                            27
  CLUS_3                           6                            29
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       42     12      5
  AMP PEAK  3(1Q21.3) WILD-TYPE     60     30     28
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          42                            60
  CLUS_2                          12                            30
  CLUS_3                           5                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       35     13     10
  AMP PEAK  3(1Q21.3) WILD-TYPE     34     54     27
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          35                            34
  CLUS_2                          13                            54
  CLUS_3                          10                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       33     20      5
  AMP PEAK  3(1Q21.3) WILD-TYPE     53     27     35
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          33                            53
  CLUS_2                          20                            27
  CLUS_3                           5                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(2Q36.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED        3     19      4
  AMP PEAK  4(2Q36.2) WILD-TYPE     82     56     20
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                           3                            82
  CLUS_2                          19                            56
  CLUS_3                           4                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       16      2      1
  AMP PEAK  4(2Q36.2) WILD-TYPE     54     40     32
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          16                            54
  CLUS_2                           2                            40
  CLUS_3                           1                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2Q36.2) MUTATED       10      3      1      1      2
  AMP PEAK  4(2Q36.2) WILD-TYPE     23     18     16     20     11
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          10                            23
  CLUS_2                           3                            18
  CLUS_3                           1                            16
  CLUS_4                           1                            20
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(2Q36.2) MUTATED        6      3      5      2      1
  AMP PEAK  4(2Q36.2) WILD-TYPE     14     18     25     14     17
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                           6                            14
  CLUS_2                           3                            18
  CLUS_3                           5                            25
  CLUS_4                           2                            14
  CLUS_5                           1                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       16      7      2
  AMP PEAK  4(2Q36.2) WILD-TYPE     67     41     44
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          16                            67
  CLUS_2                           7                            41
  CLUS_3                           2                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       10     15      0
  AMP PEAK  4(2Q36.2) WILD-TYPE     64     60     28
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          10                            64
  CLUS_2                          15                            60
  CLUS_3                           0                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(2Q36.2) MUTATED       13      4      4      4
  AMP PEAK  4(2Q36.2) WILD-TYPE     56     36     31     29
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          13                            56
  CLUS_2                           4                            36
  CLUS_3                           4                            31
  CLUS_4                           4                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       22      2      1
  AMP PEAK  4(2Q36.2) WILD-TYPE     80     40     32
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          22                            80
  CLUS_2                           2                            40
  CLUS_3                           1                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       14      6      5
  AMP PEAK  4(2Q36.2) WILD-TYPE     55     61     32
D4V9, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          14                            55
  CLUS_2                           6                            61
  CLUS_3                           5                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(2Q36.2) MUTATED       20      4      1
  AMP PEAK  4(2Q36.2) WILD-TYPE     66     43     39
D4V10, multiclass
        clus
vv       AMP PEAK  4(2Q36.2) MUTATED AMP PEAK  4(2Q36.2) WILD-TYPE
  CLUS_1                          20                            66
  CLUS_2                           4                            43
  CLUS_3                           1                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(3P12.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        2      5      5
  AMP PEAK  5(3P12.2) WILD-TYPE     83     70     19
D5V1, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           2                            83
  CLUS_2                           5                            70
  CLUS_3                           5                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        4      1      2
  AMP PEAK  5(3P12.2) WILD-TYPE     66     41     31
D5V2, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           4                            66
  CLUS_2                           1                            41
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P12.2) MUTATED        3      1      0      1      1
  AMP PEAK  5(3P12.2) WILD-TYPE     30     20     17     20     12
D5V3, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           1                            20
  CLUS_3                           0                            17
  CLUS_4                           1                            20
  CLUS_5                           1                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3P12.2) MUTATED        1      1      3      1      0
  AMP PEAK  5(3P12.2) WILD-TYPE     19     20     27     15     18
D5V4, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           1                            19
  CLUS_2                           1                            20
  CLUS_3                           3                            27
  CLUS_4                           1                            15
  CLUS_5                           0                            18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        5      3      3
  AMP PEAK  5(3P12.2) WILD-TYPE     78     45     43
D5V5, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           5                            78
  CLUS_2                           3                            45
  CLUS_3                           3                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        4      5      2
  AMP PEAK  5(3P12.2) WILD-TYPE     70     70     26
D5V6, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           4                            70
  CLUS_2                           5                            70
  CLUS_3                           2                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3P12.2) MUTATED        4      3      3      1
  AMP PEAK  5(3P12.2) WILD-TYPE     65     37     32     32
D5V7, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           4                            65
  CLUS_2                           3                            37
  CLUS_3                           3                            32
  CLUS_4                           1                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        7      2      2
  AMP PEAK  5(3P12.2) WILD-TYPE     95     40     31
D5V8, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           7                            95
  CLUS_2                           2                            40
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        5      4      2
  AMP PEAK  5(3P12.2) WILD-TYPE     64     63     35
D5V9, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           5                            64
  CLUS_2                           4                            63
  CLUS_3                           2                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3P12.2) MUTATED        7      2      2
  AMP PEAK  5(3P12.2) WILD-TYPE     79     45     38
D5V10, multiclass
        clus
vv       AMP PEAK  5(3P12.2) MUTATED AMP PEAK  5(3P12.2) WILD-TYPE
  CLUS_1                           7                            79
  CLUS_2                           2                            45
  CLUS_3                           2                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED        4     18     10
  AMP PEAK  6(3Q26.2) WILD-TYPE     81     57     14
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                           4                            81
  CLUS_2                          18                            57
  CLUS_3                          10                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       20      1      4
  AMP PEAK  6(3Q26.2) WILD-TYPE     50     41     29
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          20                            50
  CLUS_2                           1                            41
  CLUS_3                           4                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED        7      3      1      4      6
  AMP PEAK  6(3Q26.2) WILD-TYPE     26     18     16     17      7
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                           7                            26
  CLUS_2                           3                            18
  CLUS_3                           1                            16
  CLUS_4                           4                            17
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED        2      3     11      2      3
  AMP PEAK  6(3Q26.2) WILD-TYPE     18     18     19     14     15
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                           2                            18
  CLUS_2                           3                            18
  CLUS_3                          11                            19
  CLUS_4                           2                            14
  CLUS_5                           3                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       21      6      4
  AMP PEAK  6(3Q26.2) WILD-TYPE     62     42     42
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          21                            62
  CLUS_2                           6                            42
  CLUS_3                           4                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       10     19      2
  AMP PEAK  6(3Q26.2) WILD-TYPE     64     56     26
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          10                            64
  CLUS_2                          19                            56
  CLUS_3                           2                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       17      5      6      3
  AMP PEAK  6(3Q26.2) WILD-TYPE     52     35     29     30
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          17                            52
  CLUS_2                           5                            35
  CLUS_3                           6                            29
  CLUS_4                           3                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       25      3      3
  AMP PEAK  6(3Q26.2) WILD-TYPE     77     39     30
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          25                            77
  CLUS_2                           3                            39
  CLUS_3                           3                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       19      5      6
  AMP PEAK  6(3Q26.2) WILD-TYPE     50     62     31
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          19                            50
  CLUS_2                           5                            62
  CLUS_3                           6                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       20      7      3
  AMP PEAK  6(3Q26.2) WILD-TYPE     66     40     37
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          20                            66
  CLUS_2                           7                            40
  CLUS_3                           3                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        4      6      5
  AMP PEAK  7(4P16.3) WILD-TYPE     81     69     19
D7V1, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           4                            81
  CLUS_2                           6                            69
  CLUS_3                           5                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        6      3      2
  AMP PEAK  7(4P16.3) WILD-TYPE     64     39     31
D7V2, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           6                            64
  CLUS_2                           3                            39
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED        3      0      1      2      0
  AMP PEAK  7(4P16.3) WILD-TYPE     30     21     16     19     13
D7V3, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           0                            21
  CLUS_3                           1                            16
  CLUS_4                           2                            19
  CLUS_5                           0                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(4P16.3) MUTATED        1      0      2      2      1
  AMP PEAK  7(4P16.3) WILD-TYPE     19     21     28     14     17
D7V4, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           1                            19
  CLUS_2                           0                            21
  CLUS_3                           2                            28
  CLUS_4                           2                            14
  CLUS_5                           1                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        6      1      8
  AMP PEAK  7(4P16.3) WILD-TYPE     77     47     38
D7V5, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           6                            77
  CLUS_2                           1                            47
  CLUS_3                           8                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        2      8      5
  AMP PEAK  7(4P16.3) WILD-TYPE     72     67     23
D7V6, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           2                            72
  CLUS_2                           8                            67
  CLUS_3                           5                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(4P16.3) MUTATED        6      1      2      6
  AMP PEAK  7(4P16.3) WILD-TYPE     63     39     33     27
D7V7, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           6                            63
  CLUS_2                           1                            39
  CLUS_3                           2                            33
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED       10      0      5
  AMP PEAK  7(4P16.3) WILD-TYPE     92     42     28
D7V8, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          10                            92
  CLUS_2                           0                            42
  CLUS_3                           5                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        7      4      4
  AMP PEAK  7(4P16.3) WILD-TYPE     62     63     33
D7V9, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           7                            62
  CLUS_2                           4                            63
  CLUS_3                           4                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(4P16.3) MUTATED        9      1      5
  AMP PEAK  7(4P16.3) WILD-TYPE     77     46     35
D7V10, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           9                            77
  CLUS_2                           1                            46
  CLUS_3                           5                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(6P21.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        1      6      5
  AMP PEAK  8(6P21.31) WILD-TYPE     84     69     19
D8V1, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            1                             84
  CLUS_2                            6                             69
  CLUS_3                            5                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        6      3      0
  AMP PEAK  8(6P21.31) WILD-TYPE     64     39     33
D8V2, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            6                             64
  CLUS_2                            3                             39
  CLUS_3                            0                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(6P21.31) MUTATED        2      1      1      0      1
  AMP PEAK  8(6P21.31) WILD-TYPE     31     20     16     21     12
D8V3, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            2                             31
  CLUS_2                            1                             20
  CLUS_3                            1                             16
  CLUS_4                            0                             21
  CLUS_5                            1                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(6P21.31) MUTATED        1      1      2      1      0
  AMP PEAK  8(6P21.31) WILD-TYPE     19     20     28     15     18
D8V4, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            1                             19
  CLUS_2                            1                             20
  CLUS_3                            2                             28
  CLUS_4                            1                             15
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        6      5      1
  AMP PEAK  8(6P21.31) WILD-TYPE     77     43     45
D8V5, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            6                             77
  CLUS_2                            5                             43
  CLUS_3                            1                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        6      5      1
  AMP PEAK  8(6P21.31) WILD-TYPE     68     70     27
D8V6, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            6                             68
  CLUS_2                            5                             70
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P21.31) MUTATED        7      3      1      1
  AMP PEAK  8(6P21.31) WILD-TYPE     62     37     34     32
D8V7, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            7                             62
  CLUS_2                            3                             37
  CLUS_3                            1                             34
  CLUS_4                            1                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        8      3      1
  AMP PEAK  8(6P21.31) WILD-TYPE     94     39     32
D8V8, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            8                             94
  CLUS_2                            3                             39
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        7      0      4
  AMP PEAK  8(6P21.31) WILD-TYPE     62     67     33
D8V9, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            7                             62
  CLUS_2                            0                             67
  CLUS_3                            4                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P21.31) MUTATED        4      6      1
  AMP PEAK  8(6P21.31) WILD-TYPE     82     41     39
D8V10, multiclass
        clus
vv       AMP PEAK  8(6P21.31) MUTATED AMP PEAK  8(6P21.31) WILD-TYPE
  CLUS_1                            4                             82
  CLUS_2                            6                             41
  CLUS_3                            1                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(7Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       12     28     16
  AMP PEAK  9(7Q22.1) WILD-TYPE     73     47      8
D9V1, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          12                            73
  CLUS_2                          28                            47
  CLUS_3                          16                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       24     10      6
  AMP PEAK  9(7Q22.1) WILD-TYPE     46     32     27
D9V2, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          24                            46
  CLUS_2                          10                            32
  CLUS_3                           6                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(7Q22.1) MUTATED       11      6      3      3      6
  AMP PEAK  9(7Q22.1) WILD-TYPE     22     15     14     18      7
D9V3, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          11                            22
  CLUS_2                           6                            15
  CLUS_3                           3                            14
  CLUS_4                           3                            18
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(7Q22.1) MUTATED        7      7      8      4      3
  AMP PEAK  9(7Q22.1) WILD-TYPE     13     14     22     12     15
D9V4, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                           7                            13
  CLUS_2                           7                            14
  CLUS_3                           8                            22
  CLUS_4                           4                            12
  CLUS_5                           3                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       31     11     11
  AMP PEAK  9(7Q22.1) WILD-TYPE     52     37     35
D9V5, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          31                            52
  CLUS_2                          11                            37
  CLUS_3                          11                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       18     27      8
  AMP PEAK  9(7Q22.1) WILD-TYPE     56     48     20
D9V6, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          18                            56
  CLUS_2                          27                            48
  CLUS_3                           8                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(7Q22.1) MUTATED       29      8      7      9
  AMP PEAK  9(7Q22.1) WILD-TYPE     40     32     28     24
D9V7, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          29                            40
  CLUS_2                           8                            32
  CLUS_3                           7                            28
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       38      7      8
  AMP PEAK  9(7Q22.1) WILD-TYPE     64     35     25
D9V8, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          38                            64
  CLUS_2                           7                            35
  CLUS_3                           8                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       27     11     14
  AMP PEAK  9(7Q22.1) WILD-TYPE     42     56     23
D9V9, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          27                            42
  CLUS_2                          11                            56
  CLUS_3                          14                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(7Q22.1) MUTATED       33     10      9
  AMP PEAK  9(7Q22.1) WILD-TYPE     53     37     31
D9V10, multiclass
        clus
vv       AMP PEAK  9(7Q22.1) MUTATED AMP PEAK  9(7Q22.1) WILD-TYPE
  CLUS_1                          33                            53
  CLUS_2                          10                            37
  CLUS_3                           9                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(8P11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       10     15      9
  AMP PEAK 10(8P11.22) WILD-TYPE     75     60     15
D10V1, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           10                             75
  CLUS_2                           15                             60
  CLUS_3                            9                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       16      5      3
  AMP PEAK 10(8P11.22) WILD-TYPE     54     37     30
D10V2, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           16                             54
  CLUS_2                            5                             37
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(8P11.22) MUTATED        6      7      0      4      2
  AMP PEAK 10(8P11.22) WILD-TYPE     27     14     17     17     11
D10V3, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                            6                             27
  CLUS_2                            7                             14
  CLUS_3                            0                             17
  CLUS_4                            4                             17
  CLUS_5                            2                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(8P11.22) MUTATED        5      7      4      0      3
  AMP PEAK 10(8P11.22) WILD-TYPE     15     14     26     16     15
D10V4, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                            5                             15
  CLUS_2                            7                             14
  CLUS_3                            4                             26
  CLUS_4                            0                             16
  CLUS_5                            3                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       15      9      8
  AMP PEAK 10(8P11.22) WILD-TYPE     68     39     38
D10V5, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           15                             68
  CLUS_2                            9                             39
  CLUS_3                            8                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       12     16      4
  AMP PEAK 10(8P11.22) WILD-TYPE     62     59     24
D10V6, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           12                             62
  CLUS_2                           16                             59
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8P11.22) MUTATED       13      9      5      5
  AMP PEAK 10(8P11.22) WILD-TYPE     56     31     30     28
D10V7, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           13                             56
  CLUS_2                            9                             31
  CLUS_3                            5                             30
  CLUS_4                            5                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       21      6      5
  AMP PEAK 10(8P11.22) WILD-TYPE     81     36     28
D10V8, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           21                             81
  CLUS_2                            6                             36
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       12      7     11
  AMP PEAK 10(8P11.22) WILD-TYPE     57     60     26
D10V9, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           12                             57
  CLUS_2                            7                             60
  CLUS_3                           11                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8P11.22) MUTATED       18      7      5
  AMP PEAK 10(8P11.22) WILD-TYPE     68     40     35
D10V10, multiclass
        clus
vv       AMP PEAK 10(8P11.22) MUTATED AMP PEAK 10(8P11.22) WILD-TYPE
  CLUS_1                           18                             68
  CLUS_2                            7                             40
  CLUS_3                            5                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       10     14     10
  AMP PEAK 11(8P11.21) WILD-TYPE     75     61     14
D11V1, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           10                             75
  CLUS_2                           14                             61
  CLUS_3                           10                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       16      5      3
  AMP PEAK 11(8P11.21) WILD-TYPE     54     37     30
D11V2, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           16                             54
  CLUS_2                            5                             37
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(8P11.21) MUTATED        7      6      0      4      2
  AMP PEAK 11(8P11.21) WILD-TYPE     26     15     17     17     11
D11V3, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                            7                             26
  CLUS_2                            6                             15
  CLUS_3                            0                             17
  CLUS_4                            4                             17
  CLUS_5                            2                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(8P11.21) MUTATED        6      6      4      0      3
  AMP PEAK 11(8P11.21) WILD-TYPE     14     15     26     16     15
D11V4, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                            6                             14
  CLUS_2                            6                             15
  CLUS_3                            4                             26
  CLUS_4                            0                             16
  CLUS_5                            3                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       16     10      6
  AMP PEAK 11(8P11.21) WILD-TYPE     67     38     40
D11V5, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           16                             67
  CLUS_2                           10                             38
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       12     16      4
  AMP PEAK 11(8P11.21) WILD-TYPE     62     59     24
D11V6, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           12                             62
  CLUS_2                           16                             59
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8P11.21) MUTATED       14      8      5      5
  AMP PEAK 11(8P11.21) WILD-TYPE     55     32     30     28
D11V7, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           14                             55
  CLUS_2                            8                             32
  CLUS_3                            5                             30
  CLUS_4                            5                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       23      5      4
  AMP PEAK 11(8P11.21) WILD-TYPE     79     37     29
D11V8, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           23                             79
  CLUS_2                            5                             37
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       14      6     11
  AMP PEAK 11(8P11.21) WILD-TYPE     55     61     26
D11V9, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           14                             55
  CLUS_2                            6                             61
  CLUS_3                           11                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8P11.21) MUTATED       20      7      4
  AMP PEAK 11(8P11.21) WILD-TYPE     66     40     36
D11V10, multiclass
        clus
vv       AMP PEAK 11(8P11.21) MUTATED AMP PEAK 11(8P11.21) WILD-TYPE
  CLUS_1                           20                             66
  CLUS_2                            7                             40
  CLUS_3                            4                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       14     41     19
  AMP PEAK 12(8Q24.21) WILD-TYPE     71     34      5
D12V1, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           14                             71
  CLUS_2                           41                             34
  CLUS_3                           19                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       41      9      5
  AMP PEAK 12(8Q24.21) WILD-TYPE     29     33     28
D12V2, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           41                             29
  CLUS_2                            9                             33
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(8Q24.21) MUTATED       20     10      4      6      6
  AMP PEAK 12(8Q24.21) WILD-TYPE     13     11     13     15      7
D12V3, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           20                             13
  CLUS_2                           10                             11
  CLUS_3                            4                             13
  CLUS_4                            6                             15
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(8Q24.21) MUTATED       12     10     16      5      3
  AMP PEAK 12(8Q24.21) WILD-TYPE      8     11     14     11     15
D12V4, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           12                              8
  CLUS_2                           10                             11
  CLUS_3                           16                             14
  CLUS_4                            5                             11
  CLUS_5                            3                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       38     21     13
  AMP PEAK 12(8Q24.21) WILD-TYPE     45     27     33
D12V5, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           38                             45
  CLUS_2                           21                             27
  CLUS_3                           13                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       31     35      6
  AMP PEAK 12(8Q24.21) WILD-TYPE     43     40     22
D12V6, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           31                             43
  CLUS_2                           35                             40
  CLUS_3                            6                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       34     18     10     10
  AMP PEAK 12(8Q24.21) WILD-TYPE     35     22     25     23
D12V7, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           34                             35
  CLUS_2                           18                             22
  CLUS_3                           10                             25
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       49     14      9
  AMP PEAK 12(8Q24.21) WILD-TYPE     53     28     24
D12V8, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           49                             53
  CLUS_2                           14                             28
  CLUS_3                            9                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       34     17     20
  AMP PEAK 12(8Q24.21) WILD-TYPE     35     50     17
D12V9, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           34                             35
  CLUS_2                           17                             50
  CLUS_3                           20                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       41     22      8
  AMP PEAK 12(8Q24.21) WILD-TYPE     45     25     32
D12V10, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           41                             45
  CLUS_2                           22                             25
  CLUS_3                            8                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED        5     11      8
  AMP PEAK 13(9P13.3) WILD-TYPE     80     64     16
D13V1, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                           5                            80
  CLUS_2                          11                            64
  CLUS_3                           8                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED        9      3      3
  AMP PEAK 13(9P13.3) WILD-TYPE     61     39     30
D13V2, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                           9                            61
  CLUS_2                           3                            39
  CLUS_3                           3                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(9P13.3) MUTATED        4      5      1      1      1
  AMP PEAK 13(9P13.3) WILD-TYPE     29     16     16     20     12
D13V3, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                           4                            29
  CLUS_2                           5                            16
  CLUS_3                           1                            16
  CLUS_4                           1                            20
  CLUS_5                           1                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(9P13.3) MUTATED        0      5      5      2      0
  AMP PEAK 13(9P13.3) WILD-TYPE     20     16     25     14     18
D13V4, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                           0                            20
  CLUS_2                           5                            16
  CLUS_3                           5                            25
  CLUS_4                           2                            14
  CLUS_5                           0                            18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED       15      3      5
  AMP PEAK 13(9P13.3) WILD-TYPE     68     45     41
D13V5, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                          15                            68
  CLUS_2                           3                            45
  CLUS_3                           5                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED        7     13      3
  AMP PEAK 13(9P13.3) WILD-TYPE     67     62     25
D13V6, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                           7                            67
  CLUS_2                          13                            62
  CLUS_3                           3                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(9P13.3) MUTATED       10      3      6      4
  AMP PEAK 13(9P13.3) WILD-TYPE     59     37     29     29
D13V7, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                          10                            59
  CLUS_2                           3                            37
  CLUS_3                           6                            29
  CLUS_4                           4                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED       18      2      3
  AMP PEAK 13(9P13.3) WILD-TYPE     84     40     30
D13V8, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                          18                            84
  CLUS_2                           2                            40
  CLUS_3                           3                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED       11      8      4
  AMP PEAK 13(9P13.3) WILD-TYPE     58     59     33
D13V9, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                          11                            58
  CLUS_2                           8                            59
  CLUS_3                           4                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(9P13.3) MUTATED       14      5      4
  AMP PEAK 13(9P13.3) WILD-TYPE     72     42     36
D13V10, multiclass
        clus
vv       AMP PEAK 13(9P13.3) MUTATED AMP PEAK 13(9P13.3) WILD-TYPE
  CLUS_1                          14                            72
  CLUS_2                           5                            42
  CLUS_3                           4                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(12P13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED        2     15     22
  AMP PEAK 14(12P13.33) WILD-TYPE     83     60      2
D14V1, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                             2                              83
  CLUS_2                            15                              60
  CLUS_3                            22                               2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       21      7      0
  AMP PEAK 14(12P13.33) WILD-TYPE     49     35     33
D14V2, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            21                              49
  CLUS_2                             7                              35
  CLUS_3                             0                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(12P13.33) MUTATED        7      2      3      3      4
  AMP PEAK 14(12P13.33) WILD-TYPE     26     19     14     18      9
D14V3, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                             7                              26
  CLUS_2                             2                              19
  CLUS_3                             3                              14
  CLUS_4                             3                              18
  CLUS_5                             4                               9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(12P13.33) MUTATED        2      2      8      4      3
  AMP PEAK 14(12P13.33) WILD-TYPE     18     19     22     12     15
D14V4, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                             2                              18
  CLUS_2                             2                              19
  CLUS_3                             8                              22
  CLUS_4                             4                              12
  CLUS_5                             3                              15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       20      9      9
  AMP PEAK 14(12P13.33) WILD-TYPE     63     39     37
D14V5, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            20                              63
  CLUS_2                             9                              39
  CLUS_3                             9                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       13     18      7
  AMP PEAK 14(12P13.33) WILD-TYPE     61     57     21
D14V6, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            13                              61
  CLUS_2                            18                              57
  CLUS_3                             7                              21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(12P13.33) MUTATED       17      8      3     10
  AMP PEAK 14(12P13.33) WILD-TYPE     52     32     32     23
D14V7, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            17                              52
  CLUS_2                             8                              32
  CLUS_3                             3                              32
  CLUS_4                            10                              23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       24      5      9
  AMP PEAK 14(12P13.33) WILD-TYPE     78     37     24
D14V8, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            24                              78
  CLUS_2                             5                              37
  CLUS_3                             9                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       19      5     13
  AMP PEAK 14(12P13.33) WILD-TYPE     50     62     24
D14V9, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            19                              50
  CLUS_2                             5                              62
  CLUS_3                            13                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(12P13.33) MUTATED       20      9      8
  AMP PEAK 14(12P13.33) WILD-TYPE     66     38     32
D14V10, multiclass
        clus
vv       AMP PEAK 14(12P13.33) MUTATED AMP PEAK 14(12P13.33) WILD-TYPE
  CLUS_1                            20                              66
  CLUS_2                             9                              38
  CLUS_3                             8                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(12P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED        2     21     20
  AMP PEAK 15(12P11.21) WILD-TYPE     83     54      4
D15V1, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                             2                              83
  CLUS_2                            21                              54
  CLUS_3                            20                               4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       24      6      1
  AMP PEAK 15(12P11.21) WILD-TYPE     46     36     32
D15V2, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            24                              46
  CLUS_2                             6                              36
  CLUS_3                             1                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(12P11.21) MUTATED        8      3      2      3      5
  AMP PEAK 15(12P11.21) WILD-TYPE     25     18     15     18      8
D15V3, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                             8                              25
  CLUS_2                             3                              18
  CLUS_3                             2                              15
  CLUS_4                             3                              18
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(12P11.21) MUTATED        3      4      8      3      3
  AMP PEAK 15(12P11.21) WILD-TYPE     17     17     22     13     15
D15V4, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                             3                              17
  CLUS_2                             4                              17
  CLUS_3                             8                              22
  CLUS_4                             3                              13
  CLUS_5                             3                              15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       22      7     12
  AMP PEAK 15(12P11.21) WILD-TYPE     61     41     34
D15V5, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            22                              61
  CLUS_2                             7                              41
  CLUS_3                            12                              34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       13     20      8
  AMP PEAK 15(12P11.21) WILD-TYPE     61     55     20
D15V6, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            13                              61
  CLUS_2                            20                              55
  CLUS_3                             8                              20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(12P11.21) MUTATED       20      5      4     12
  AMP PEAK 15(12P11.21) WILD-TYPE     49     35     31     21
D15V7, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            20                              49
  CLUS_2                             5                              35
  CLUS_3                             4                              31
  CLUS_4                            12                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       27      3     11
  AMP PEAK 15(12P11.21) WILD-TYPE     75     39     22
D15V8, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            27                              75
  CLUS_2                             3                              39
  CLUS_3                            11                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       20      7     13
  AMP PEAK 15(12P11.21) WILD-TYPE     49     60     24
D15V9, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            20                              49
  CLUS_2                             7                              60
  CLUS_3                            13                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12P11.21) MUTATED       22      8     10
  AMP PEAK 15(12P11.21) WILD-TYPE     64     39     30
D15V10, multiclass
        clus
vv       AMP PEAK 15(12P11.21) MUTATED AMP PEAK 15(12P11.21) WILD-TYPE
  CLUS_1                            22                              64
  CLUS_2                             8                              39
  CLUS_3                            10                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED        2     10     17
  AMP PEAK 16(12Q15) WILD-TYPE     83     65      7
D16V1, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          2                           83
  CLUS_2                         10                           65
  CLUS_3                         17                            7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       17      6      0
  AMP PEAK 16(12Q15) WILD-TYPE     53     36     33
D16V2, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         17                           53
  CLUS_2                          6                           36
  CLUS_3                          0                           33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(12Q15) MUTATED        6      1      2      4      4
  AMP PEAK 16(12Q15) WILD-TYPE     27     20     15     17      9
D16V3, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          6                           27
  CLUS_2                          1                           20
  CLUS_3                          2                           15
  CLUS_4                          4                           17
  CLUS_5                          4                            9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(12Q15) MUTATED        2      1      8      3      3
  AMP PEAK 16(12Q15) WILD-TYPE     18     20     22     13     15
D16V4, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          2                           18
  CLUS_2                          1                           20
  CLUS_3                          8                           22
  CLUS_4                          3                           13
  CLUS_5                          3                           15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       14      6      8
  AMP PEAK 16(12Q15) WILD-TYPE     69     42     38
D16V5, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         14                           69
  CLUS_2                          6                           42
  CLUS_3                          8                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       11     10      7
  AMP PEAK 16(12Q15) WILD-TYPE     63     65     21
D16V6, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         11                           63
  CLUS_2                         10                           65
  CLUS_3                          7                           21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12Q15) MUTATED       12      5      2      9
  AMP PEAK 16(12Q15) WILD-TYPE     57     35     33     24
D16V7, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         12                           57
  CLUS_2                          5                           35
  CLUS_3                          2                           33
  CLUS_4                          9                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       16      3      9
  AMP PEAK 16(12Q15) WILD-TYPE     86     39     24
D16V8, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         16                           86
  CLUS_2                          3                           39
  CLUS_3                          9                           24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       11      5     11
  AMP PEAK 16(12Q15) WILD-TYPE     58     62     26
D16V9, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         11                           58
  CLUS_2                          5                           62
  CLUS_3                         11                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED       12      6      9
  AMP PEAK 16(12Q15) WILD-TYPE     74     41     31
D16V10, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         12                           74
  CLUS_2                          6                           41
  CLUS_3                          9                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(15Q26.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED        4     13      5
  AMP PEAK 17(15Q26.1) WILD-TYPE     81     62     19
D17V1, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            4                             81
  CLUS_2                           13                             62
  CLUS_3                            5                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED       11      5      0
  AMP PEAK 17(15Q26.1) WILD-TYPE     59     37     33
D17V2, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                           11                             59
  CLUS_2                            5                             37
  CLUS_3                            0                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(15Q26.1) MUTATED        9      2      1      0      2
  AMP PEAK 17(15Q26.1) WILD-TYPE     24     19     16     21     11
D17V3, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            9                             24
  CLUS_2                            2                             19
  CLUS_3                            1                             16
  CLUS_4                            0                             21
  CLUS_5                            2                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(15Q26.1) MUTATED        5      2      6      1      0
  AMP PEAK 17(15Q26.1) WILD-TYPE     15     19     24     15     18
D17V4, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            5                             15
  CLUS_2                            2                             19
  CLUS_3                            6                             24
  CLUS_4                            1                             15
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED        9      9      3
  AMP PEAK 17(15Q26.1) WILD-TYPE     74     39     43
D17V5, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            9                             74
  CLUS_2                            9                             39
  CLUS_3                            3                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED       13      7      1
  AMP PEAK 17(15Q26.1) WILD-TYPE     61     68     27
D17V6, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                           13                             61
  CLUS_2                            7                             68
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(15Q26.1) MUTATED        9      7      2      3
  AMP PEAK 17(15Q26.1) WILD-TYPE     60     33     33     30
D17V7, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            9                             60
  CLUS_2                            7                             33
  CLUS_3                            2                             33
  CLUS_4                            3                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED       13      6      2
  AMP PEAK 17(15Q26.1) WILD-TYPE     89     36     31
D17V8, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                           13                             89
  CLUS_2                            6                             36
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED        9      5      6
  AMP PEAK 17(15Q26.1) WILD-TYPE     60     62     31
D17V9, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                            9                             60
  CLUS_2                            5                             62
  CLUS_3                            6                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(15Q26.1) MUTATED       11      7      2
  AMP PEAK 17(15Q26.1) WILD-TYPE     75     40     38
D17V10, multiclass
        clus
vv       AMP PEAK 17(15Q26.1) MUTATED AMP PEAK 17(15Q26.1) WILD-TYPE
  CLUS_1                           11                             75
  CLUS_2                            7                             40
  CLUS_3                            2                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(17P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        4      4      7
  AMP PEAK 18(17P11.2) WILD-TYPE     81     71     17
D18V1, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            4                             81
  CLUS_2                            4                             71
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        6      5      0
  AMP PEAK 18(17P11.2) WILD-TYPE     64     37     33
D18V2, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            6                             64
  CLUS_2                            5                             37
  CLUS_3                            0                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(17P11.2) MUTATED        3      0      1      3      1
  AMP PEAK 18(17P11.2) WILD-TYPE     30     21     16     18     12
D18V3, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            3                             30
  CLUS_2                            0                             21
  CLUS_3                            1                             16
  CLUS_4                            3                             18
  CLUS_5                            1                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(17P11.2) MUTATED        2      0      3      2      1
  AMP PEAK 18(17P11.2) WILD-TYPE     18     21     27     14     17
D18V4, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            2                             18
  CLUS_2                            0                             21
  CLUS_3                            3                             27
  CLUS_4                            2                             14
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        6      2      7
  AMP PEAK 18(17P11.2) WILD-TYPE     77     46     39
D18V5, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            6                             77
  CLUS_2                            2                             46
  CLUS_3                            7                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        4      5      6
  AMP PEAK 18(17P11.2) WILD-TYPE     70     70     22
D18V6, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            4                             70
  CLUS_2                            5                             70
  CLUS_3                            6                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(17P11.2) MUTATED        4      3      1      7
  AMP PEAK 18(17P11.2) WILD-TYPE     65     37     34     26
D18V7, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            4                             65
  CLUS_2                            3                             37
  CLUS_3                            1                             34
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        7      2      6
  AMP PEAK 18(17P11.2) WILD-TYPE     95     40     27
D18V8, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            7                             95
  CLUS_2                            2                             40
  CLUS_3                            6                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        6      5      4
  AMP PEAK 18(17P11.2) WILD-TYPE     63     62     33
D18V9, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            6                             63
  CLUS_2                            5                             62
  CLUS_3                            4                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(17P11.2) MUTATED        6      3      6
  AMP PEAK 18(17P11.2) WILD-TYPE     80     44     34
D18V10, multiclass
        clus
vv       AMP PEAK 18(17P11.2) MUTATED AMP PEAK 18(17P11.2) WILD-TYPE
  CLUS_1                            6                             80
  CLUS_2                            3                             44
  CLUS_3                            6                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED        4     20      7
  AMP PEAK 19(17Q12) WILD-TYPE     81     55     17
D19V1, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          4                           81
  CLUS_2                         20                           55
  CLUS_3                          7                           17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       13      5      2
  AMP PEAK 19(17Q12) WILD-TYPE     57     37     31
D19V2, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         13                           57
  CLUS_2                          5                           37
  CLUS_3                          2                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(17Q12) MUTATED        7      5      1      2      2
  AMP PEAK 19(17Q12) WILD-TYPE     26     16     16     19     11
D19V3, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          7                           26
  CLUS_2                          5                           16
  CLUS_3                          1                           16
  CLUS_4                          2                           19
  CLUS_5                          2                           11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(17Q12) MUTATED        3      6      5      2      1
  AMP PEAK 19(17Q12) WILD-TYPE     17     15     25     14     17
D19V4, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          3                           17
  CLUS_2                          6                           15
  CLUS_3                          5                           25
  CLUS_4                          2                           14
  CLUS_5                          1                           17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       18      4      9
  AMP PEAK 19(17Q12) WILD-TYPE     65     44     37
D19V5, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         18                           65
  CLUS_2                          4                           44
  CLUS_3                          9                           37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED        9     15      7
  AMP PEAK 19(17Q12) WILD-TYPE     65     60     21
D19V6, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          9                           65
  CLUS_2                         15                           60
  CLUS_3                          7                           21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(17Q12) MUTATED       15      3      4      9
  AMP PEAK 19(17Q12) WILD-TYPE     54     37     31     24
D19V7, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         15                           54
  CLUS_2                          3                           37
  CLUS_3                          4                           31
  CLUS_4                          9                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       19      3      9
  AMP PEAK 19(17Q12) WILD-TYPE     83     39     24
D19V8, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         19                           83
  CLUS_2                          3                           39
  CLUS_3                          9                           24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       15      8      8
  AMP PEAK 19(17Q12) WILD-TYPE     54     59     29
D19V9, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         15                           54
  CLUS_2                          8                           59
  CLUS_3                          8                           29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       18      4      9
  AMP PEAK 19(17Q12) WILD-TYPE     68     43     31
D19V10, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         18                           68
  CLUS_2                          4                           43
  CLUS_3                          9                           31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       10     36     10
  AMP PEAK 20(18Q11.2) WILD-TYPE     75     39     14
D20V1, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           10                             75
  CLUS_2                           36                             39
  CLUS_3                           10                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       31      6      3
  AMP PEAK 20(18Q11.2) WILD-TYPE     39     36     30
D20V2, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           31                             39
  CLUS_2                            6                             36
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(18Q11.2) MUTATED       11     11      5      1      3
  AMP PEAK 20(18Q11.2) WILD-TYPE     22     10     12     20     10
D20V3, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           11                             22
  CLUS_2                           11                             10
  CLUS_3                            5                             12
  CLUS_4                            1                             20
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(18Q11.2) MUTATED        7     11      7      6      0
  AMP PEAK 20(18Q11.2) WILD-TYPE     13     10     23     10     18
D20V4, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                            7                             13
  CLUS_2                           11                             10
  CLUS_3                            7                             23
  CLUS_4                            6                             10
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       33     13      8
  AMP PEAK 20(18Q11.2) WILD-TYPE     50     35     38
D20V5, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           33                             50
  CLUS_2                           13                             35
  CLUS_3                            8                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       22     28      4
  AMP PEAK 20(18Q11.2) WILD-TYPE     52     47     24
D20V6, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           22                             52
  CLUS_2                           28                             47
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(18Q11.2) MUTATED       32     10      5      7
  AMP PEAK 20(18Q11.2) WILD-TYPE     37     30     30     26
D20V7, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           32                             37
  CLUS_2                           10                             30
  CLUS_3                            5                             30
  CLUS_4                            7                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       42      9      3
  AMP PEAK 20(18Q11.2) WILD-TYPE     60     33     30
D20V8, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           42                             60
  CLUS_2                            9                             33
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       31     13      9
  AMP PEAK 20(18Q11.2) WILD-TYPE     38     54     28
D20V9, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           31                             38
  CLUS_2                           13                             54
  CLUS_3                            9                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(18Q11.2) MUTATED       36     14      3
  AMP PEAK 20(18Q11.2) WILD-TYPE     50     33     37
D20V10, multiclass
        clus
vv       AMP PEAK 20(18Q11.2) MUTATED AMP PEAK 20(18Q11.2) WILD-TYPE
  CLUS_1                           36                             50
  CLUS_2                           14                             33
  CLUS_3                            3                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        3      8      7
  AMP PEAK 21(19P13.2) WILD-TYPE     82     67     17
D21V1, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            3                             82
  CLUS_2                            8                             67
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        8      4      0
  AMP PEAK 21(19P13.2) WILD-TYPE     62     38     33
D21V2, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            8                             62
  CLUS_2                            4                             38
  CLUS_3                            0                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(19P13.2) MUTATED        5      1      1      1      1
  AMP PEAK 21(19P13.2) WILD-TYPE     28     20     16     20     12
D21V3, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            5                             28
  CLUS_2                            1                             20
  CLUS_3                            1                             16
  CLUS_4                            1                             20
  CLUS_5                            1                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(19P13.2) MUTATED        3      1      2      2      1
  AMP PEAK 21(19P13.2) WILD-TYPE     17     20     28     14     17
D21V4, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            3                             17
  CLUS_2                            1                             20
  CLUS_3                            2                             28
  CLUS_4                            2                             14
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        9      4      5
  AMP PEAK 21(19P13.2) WILD-TYPE     74     44     41
D21V5, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            9                             74
  CLUS_2                            4                             44
  CLUS_3                            5                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        7      7      4
  AMP PEAK 21(19P13.2) WILD-TYPE     67     68     24
D21V6, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            7                             67
  CLUS_2                            7                             68
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(19P13.2) MUTATED       11      1      0      6
  AMP PEAK 21(19P13.2) WILD-TYPE     58     39     35     27
D21V7, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                           11                             58
  CLUS_2                            1                             39
  CLUS_3                            0                             35
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED       12      1      5
  AMP PEAK 21(19P13.2) WILD-TYPE     90     41     28
D21V8, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                           12                             90
  CLUS_2                            1                             41
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED       10      3      5
  AMP PEAK 21(19P13.2) WILD-TYPE     59     64     32
D21V9, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                           10                             59
  CLUS_2                            3                             64
  CLUS_3                            5                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED       11      2      5
  AMP PEAK 21(19P13.2) WILD-TYPE     75     45     35
D21V10, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                           11                             75
  CLUS_2                            2                             45
  CLUS_3                            5                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(19Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED        8     28     11
  AMP PEAK 22(19Q13.2) WILD-TYPE     77     47     13
D22V1, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                            8                             77
  CLUS_2                           28                             47
  CLUS_3                           11                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       25      5      5
  AMP PEAK 22(19Q13.2) WILD-TYPE     45     37     28
D22V2, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           25                             45
  CLUS_2                            5                             37
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(19Q13.2) MUTATED       11      3      3      4      3
  AMP PEAK 22(19Q13.2) WILD-TYPE     22     18     14     17     10
D22V3, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           11                             22
  CLUS_2                            3                             18
  CLUS_3                            3                             14
  CLUS_4                            4                             17
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(19Q13.2) MUTATED        5      4      8      5      2
  AMP PEAK 22(19Q13.2) WILD-TYPE     15     17     22     11     16
D22V4, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                            5                             15
  CLUS_2                            4                             17
  CLUS_3                            8                             22
  CLUS_4                            5                             11
  CLUS_5                            2                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       22     13     11
  AMP PEAK 22(19Q13.2) WILD-TYPE     61     35     35
D22V5, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           22                             61
  CLUS_2                           13                             35
  CLUS_3                           11                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       20     20      6
  AMP PEAK 22(19Q13.2) WILD-TYPE     54     55     22
D22V6, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           20                             54
  CLUS_2                           20                             55
  CLUS_3                            6                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(19Q13.2) MUTATED       22      9      7      8
  AMP PEAK 22(19Q13.2) WILD-TYPE     47     31     28     25
D22V7, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           22                             47
  CLUS_2                            9                             31
  CLUS_3                            7                             28
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       31      7      8
  AMP PEAK 22(19Q13.2) WILD-TYPE     71     35     25
D22V8, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           31                             71
  CLUS_2                            7                             35
  CLUS_3                            8                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       21     14     11
  AMP PEAK 22(19Q13.2) WILD-TYPE     48     53     26
D22V9, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           21                             48
  CLUS_2                           14                             53
  CLUS_3                           11                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q13.2) MUTATED       26     11      9
  AMP PEAK 22(19Q13.2) WILD-TYPE     60     36     31
D22V10, multiclass
        clus
vv       AMP PEAK 22(19Q13.2) MUTATED AMP PEAK 22(19Q13.2) WILD-TYPE
  CLUS_1                           26                             60
  CLUS_2                           11                             36
  CLUS_3                            9                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(20P11.23) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED        7     15     16
  AMP PEAK 23(20P11.23) WILD-TYPE     78     60      8
D23V1, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                             7                              78
  CLUS_2                            15                              60
  CLUS_3                            16                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       18      7      2
  AMP PEAK 23(20P11.23) WILD-TYPE     52     35     31
D23V2, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            18                              52
  CLUS_2                             7                              35
  CLUS_3                             2                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(20P11.23) MUTATED       12      3      2      2      3
  AMP PEAK 23(20P11.23) WILD-TYPE     21     18     15     19     10
D23V3, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            12                              21
  CLUS_2                             3                              18
  CLUS_3                             2                              15
  CLUS_4                             2                              19
  CLUS_5                             3                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(20P11.23) MUTATED        7      3      7      3      2
  AMP PEAK 23(20P11.23) WILD-TYPE     13     18     23     13     16
D23V4, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                             7                              13
  CLUS_2                             3                              18
  CLUS_3                             7                              23
  CLUS_4                             3                              13
  CLUS_5                             2                              16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       19      8     10
  AMP PEAK 23(20P11.23) WILD-TYPE     64     40     36
D23V5, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            19                              64
  CLUS_2                             8                              40
  CLUS_3                            10                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       12     19      6
  AMP PEAK 23(20P11.23) WILD-TYPE     62     56     22
D23V6, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            12                              62
  CLUS_2                            19                              56
  CLUS_3                             6                              22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(20P11.23) MUTATED       18      6      5      8
  AMP PEAK 23(20P11.23) WILD-TYPE     51     34     30     25
D23V7, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            18                              51
  CLUS_2                             6                              34
  CLUS_3                             5                              30
  CLUS_4                             8                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       27      3      7
  AMP PEAK 23(20P11.23) WILD-TYPE     75     39     26
D23V8, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            27                              75
  CLUS_2                             3                              39
  CLUS_3                             7                              26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       18      5     13
  AMP PEAK 23(20P11.23) WILD-TYPE     51     62     24
D23V9, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            18                              51
  CLUS_2                             5                              62
  CLUS_3                            13                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20P11.23) MUTATED       23      6      7
  AMP PEAK 23(20P11.23) WILD-TYPE     63     41     33
D23V10, multiclass
        clus
vv       AMP PEAK 23(20P11.23) MUTATED AMP PEAK 23(20P11.23) WILD-TYPE
  CLUS_1                            23                              63
  CLUS_2                             6                              41
  CLUS_3                             7                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(XP22.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        3      3      5
  AMP PEAK 24(XP22.11) WILD-TYPE     82     72     19
D24V1, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            3                             82
  CLUS_2                            3                             72
  CLUS_3                            5                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        3      5      1
  AMP PEAK 24(XP22.11) WILD-TYPE     67     37     32
D24V2, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            3                             67
  CLUS_2                            5                             37
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(XP22.11) MUTATED        2      1      3      1      0
  AMP PEAK 24(XP22.11) WILD-TYPE     31     20     14     20     13
D24V3, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            2                             31
  CLUS_2                            1                             20
  CLUS_3                            3                             14
  CLUS_4                            1                             20
  CLUS_5                            0                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(XP22.11) MUTATED        2      1      0      4      0
  AMP PEAK 24(XP22.11) WILD-TYPE     18     20     30     12     18
D24V4, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            2                             18
  CLUS_2                            1                             20
  CLUS_3                            0                             30
  CLUS_4                            4                             12
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        4      1      6
  AMP PEAK 24(XP22.11) WILD-TYPE     79     47     40
D24V5, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            4                             79
  CLUS_2                            1                             47
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        2      5      4
  AMP PEAK 24(XP22.11) WILD-TYPE     72     70     24
D24V6, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            2                             72
  CLUS_2                            5                             70
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(XP22.11) MUTATED        3      1      1      6
  AMP PEAK 24(XP22.11) WILD-TYPE     66     39     34     27
D24V7, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            3                             66
  CLUS_2                            1                             39
  CLUS_3                            1                             34
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        4      2      5
  AMP PEAK 24(XP22.11) WILD-TYPE     98     40     28
D24V8, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            4                             98
  CLUS_2                            2                             40
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        3      5      2
  AMP PEAK 24(XP22.11) WILD-TYPE     66     62     35
D24V9, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            3                             66
  CLUS_2                            5                             62
  CLUS_3                            2                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(XP22.11) MUTATED        4      0      6
  AMP PEAK 24(XP22.11) WILD-TYPE     82     47     34
D24V10, multiclass
        clus
vv       AMP PEAK 24(XP22.11) MUTATED AMP PEAK 24(XP22.11) WILD-TYPE
  CLUS_1                            4                             82
  CLUS_2                            0                             47
  CLUS_3                            6                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(XQ27.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED        2      9     10
  AMP PEAK 25(XQ27.1) WILD-TYPE     83     66     14
D25V1, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           2                            83
  CLUS_2                           9                            66
  CLUS_3                          10                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED        7      5      2
  AMP PEAK 25(XQ27.1) WILD-TYPE     63     37     31
D25V2, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           7                            63
  CLUS_2                           5                            37
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(XQ27.1) MUTATED        3      1      2      2      2
  AMP PEAK 25(XQ27.1) WILD-TYPE     30     20     15     19     11
D25V3, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           3                            30
  CLUS_2                           1                            20
  CLUS_3                           2                            15
  CLUS_4                           2                            19
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(XQ27.1) MUTATED        2      1      2      4      1
  AMP PEAK 25(XQ27.1) WILD-TYPE     18     20     28     12     17
D25V4, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           2                            18
  CLUS_2                           1                            20
  CLUS_3                           2                            28
  CLUS_4                           4                            12
  CLUS_5                           1                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED        9      5      7
  AMP PEAK 25(XQ27.1) WILD-TYPE     74     43     39
D25V5, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           9                            74
  CLUS_2                           5                            43
  CLUS_3                           7                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED        6      9      6
  AMP PEAK 25(XQ27.1) WILD-TYPE     68     66     22
D25V6, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           6                            68
  CLUS_2                           9                            66
  CLUS_3                           6                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(XQ27.1) MUTATED       11      4      1      5
  AMP PEAK 25(XQ27.1) WILD-TYPE     58     36     34     28
D25V7, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                          11                            58
  CLUS_2                           4                            36
  CLUS_3                           1                            34
  CLUS_4                           5                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED       11      4      6
  AMP PEAK 25(XQ27.1) WILD-TYPE     91     38     27
D25V8, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                          11                            91
  CLUS_2                           4                            38
  CLUS_3                           6                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED        9      7      5
  AMP PEAK 25(XQ27.1) WILD-TYPE     60     60     32
D25V9, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                           9                            60
  CLUS_2                           7                            60
  CLUS_3                           5                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XQ27.1) MUTATED       11      4      6
  AMP PEAK 25(XQ27.1) WILD-TYPE     75     43     34
D25V10, multiclass
        clus
vv       AMP PEAK 25(XQ27.1) MUTATED AMP PEAK 25(XQ27.1) WILD-TYPE
  CLUS_1                          11                            75
  CLUS_2                           4                            43
  CLUS_3                           6                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = DEL PEAK  1(1P36.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       12     26     14
  DEL PEAK  1(1P36.32) WILD-TYPE     73     49     10
D26V1, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           12                             73
  CLUS_2                           26                             49
  CLUS_3                           14                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       27     11      2
  DEL PEAK  1(1P36.32) WILD-TYPE     43     31     31
D26V2, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           27                             43
  CLUS_2                           11                             31
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.32) MUTATED       14      4      4      5      4
  DEL PEAK  1(1P36.32) WILD-TYPE     19     17     13     16      9
D26V3, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           14                             19
  CLUS_2                            4                             17
  CLUS_3                            4                             13
  CLUS_4                            5                             16
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.32) MUTATED       10      4      8      5      4
  DEL PEAK  1(1P36.32) WILD-TYPE     10     17     22     11     14
D26V4, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           10                             10
  CLUS_2                            4                             17
  CLUS_3                            8                             22
  CLUS_4                            5                             11
  CLUS_5                            4                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       28     15      5
  DEL PEAK  1(1P36.32) WILD-TYPE     55     33     41
D26V5, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           28                             55
  CLUS_2                           15                             33
  CLUS_3                            5                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       19     25      4
  DEL PEAK  1(1P36.32) WILD-TYPE     55     50     24
D26V6, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           19                             55
  CLUS_2                           25                             50
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       23     13      6      6
  DEL PEAK  1(1P36.32) WILD-TYPE     46     27     29     27
D26V7, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           23                             46
  CLUS_2                           13                             27
  CLUS_3                            6                             29
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       33     11      4
  DEL PEAK  1(1P36.32) WILD-TYPE     69     31     29
D26V8, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           33                             69
  CLUS_2                           11                             31
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       22     10     14
  DEL PEAK  1(1P36.32) WILD-TYPE     47     57     23
D26V9, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           22                             47
  CLUS_2                           10                             57
  CLUS_3                           14                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       28     14      4
  DEL PEAK  1(1P36.32) WILD-TYPE     58     33     36
D26V10, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           28                             58
  CLUS_2                           14                             33
  CLUS_3                            4                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = DEL PEAK  2(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       16     36     16
  DEL PEAK  2(1P36.11) WILD-TYPE     69     39      8
D27V1, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           16                             69
  CLUS_2                           36                             39
  CLUS_3                           16                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       38     13      2
  DEL PEAK  2(1P36.11) WILD-TYPE     32     29     31
D27V2, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           38                             32
  CLUS_2                           13                             29
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P36.11) MUTATED       20      6      5      7      4
  DEL PEAK  2(1P36.11) WILD-TYPE     13     15     12     14      9
D27V3, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           20                             13
  CLUS_2                            6                             15
  CLUS_3                            5                             12
  CLUS_4                            7                             14
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P36.11) MUTATED       12      6     13      6      5
  DEL PEAK  2(1P36.11) WILD-TYPE      8     15     17     10     13
D27V4, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           12                              8
  CLUS_2                            6                             15
  CLUS_3                           13                             17
  CLUS_4                            6                             10
  CLUS_5                            5                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       36     21      7
  DEL PEAK  2(1P36.11) WILD-TYPE     47     27     39
D27V5, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           36                             47
  CLUS_2                           21                             27
  CLUS_3                            7                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       27     33      4
  DEL PEAK  2(1P36.11) WILD-TYPE     47     42     24
D27V6, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           27                             47
  CLUS_2                           33                             42
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.11) MUTATED       30     17      8      9
  DEL PEAK  2(1P36.11) WILD-TYPE     39     23     27     24
D27V7, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           30                             39
  CLUS_2                           17                             23
  CLUS_3                            8                             27
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       43     14      7
  DEL PEAK  2(1P36.11) WILD-TYPE     59     28     26
D27V8, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           43                             59
  CLUS_2                           14                             28
  CLUS_3                            7                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       29     15     18
  DEL PEAK  2(1P36.11) WILD-TYPE     40     52     19
D27V9, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           29                             40
  CLUS_2                           15                             52
  CLUS_3                           18                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.11) MUTATED       36     20      6
  DEL PEAK  2(1P36.11) WILD-TYPE     50     27     34
D27V10, multiclass
        clus
vv       DEL PEAK  2(1P36.11) MUTATED DEL PEAK  2(1P36.11) WILD-TYPE
  CLUS_1                           36                             50
  CLUS_2                           20                             27
  CLUS_3                            6                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = DEL PEAK  3(2Q14.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        0      3      6
  DEL PEAK  3(2Q14.3) WILD-TYPE     85     72     18
D28V1, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           0                            85
  CLUS_2                           3                            72
  CLUS_3                           6                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        4      3      0
  DEL PEAK  3(2Q14.3) WILD-TYPE     66     39     33
D28V2, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           4                            66
  CLUS_2                           3                            39
  CLUS_3                           0                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q14.3) MUTATED        0      0      1      1      0
  DEL PEAK  3(2Q14.3) WILD-TYPE     33     21     16     20     13
D28V3, multiclass
[1] "Remove cluster labels:"      "DEL PEAK  3(2Q14.3) MUTATED"
clus
  DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE 
                            2                           103 
                   TCGA-2L-AAQA                    TCGA-2L-AAQI 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-2L-AAQJ                    TCGA-2L-AAQL 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-2L-AAQM                    TCGA-3A-A9I5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IB                    TCGA-3A-A9IH 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IN                    TCGA-3A-A9IU 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IX                    TCGA-3A-A9IZ 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3E-AAAZ                    TCGA-F2-6879 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-F2-6880                    TCGA-F2-A44G 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-F2-A8YN                    TCGA-FB-A4P5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FB-A545                    TCGA-FB-A5VM 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FB-A78T                    TCGA-FZ-5919 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5920                    TCGA-FZ-5921 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5922                    TCGA-FZ-5923 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5924                    TCGA-FZ-5926 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-H6-A45N                    TCGA-H8-A6C1 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HV-A5A6                    TCGA-HZ-7919 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7920                    TCGA-HZ-7922 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7923                    TCGA-HZ-7924 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7925                    TCGA-HZ-8001 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8002                    TCGA-HZ-8003 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8005                    TCGA-HZ-8315 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8519                    TCGA-HZ-8638 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-A4BH                    TCGA-HZ-A4BK 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7644                    TCGA-IB-7646 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7647                    TCGA-IB-7649 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7651                    TCGA-IB-7652 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7654                    TCGA-IB-7885 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7886                    TCGA-IB-7887 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7888                    TCGA-IB-7889 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7890                    TCGA-IB-7891 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7893                    TCGA-IB-8126 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-8127                    TCGA-IB-A5SO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A5SP                    TCGA-IB-A5SQ 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A5SS                    TCGA-IB-A5ST 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A6UF                    TCGA-IB-A7LX 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A7M4                    TCGA-IB-AAUM 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUN                    TCGA-IB-AAUO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUP                    TCGA-IB-AAUS 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUU                    TCGA-IB-AAUV 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUW                    TCGA-L1-A7W4 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-LB-A7SX                    TCGA-LB-A8F3 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-LB-A9Q5                    TCGA-M8-A5N4 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-OE-A75W                    TCGA-PZ-A5RE 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-Q3-A5QY                    TCGA-Q3-AA2A 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-RB-A7B8                    TCGA-RB-AA9M 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-S4-A8RM                    TCGA-S4-A8RO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-S4-A8RP                    TCGA-US-A774 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-US-A779                    TCGA-US-A77E 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-US-A77G                    TCGA-US-A77J 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-XD-AAUL                    TCGA-XN-A8T5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-YB-A89D                    TCGA-YH-A8SY 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-YY-A8LH 
"DEL PEAK  3(2Q14.3) WILD-TYPE" 
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(2Q14.3) MUTATED        0      0      0      2      0
  DEL PEAK  3(2Q14.3) WILD-TYPE     20     21     30     14     18
D28V4, multiclass
[1] "Remove cluster labels:"      "DEL PEAK  3(2Q14.3) MUTATED"
clus
  DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE 
                            2                           103 
                   TCGA-2L-AAQA                    TCGA-2L-AAQI 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-2L-AAQJ                    TCGA-2L-AAQL 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-2L-AAQM                    TCGA-3A-A9I5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IB                    TCGA-3A-A9IH 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IN                    TCGA-3A-A9IU 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3A-A9IX                    TCGA-3A-A9IZ 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-3E-AAAZ                    TCGA-F2-6879 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-F2-6880                    TCGA-F2-A44G 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-F2-A8YN                    TCGA-FB-A4P5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FB-A545                    TCGA-FB-A5VM 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FB-A78T                    TCGA-FZ-5919 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5920                    TCGA-FZ-5921 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5922                    TCGA-FZ-5923 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-FZ-5924                    TCGA-FZ-5926 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-H6-A45N                    TCGA-H8-A6C1 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HV-A5A6                    TCGA-HZ-7919 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7920                    TCGA-HZ-7922 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7923                    TCGA-HZ-7924 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-7925                    TCGA-HZ-8001 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8002                    TCGA-HZ-8003 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8005                    TCGA-HZ-8315 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-8519                    TCGA-HZ-8638 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-HZ-A4BH                    TCGA-HZ-A4BK 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7644                    TCGA-IB-7646 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7647                    TCGA-IB-7649 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7651                    TCGA-IB-7652 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7654                    TCGA-IB-7885 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7886                    TCGA-IB-7887 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7888                    TCGA-IB-7889 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7890                    TCGA-IB-7891 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-7893                    TCGA-IB-8126 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-8127                    TCGA-IB-A5SO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A5SP                    TCGA-IB-A5SQ 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A5SS                    TCGA-IB-A5ST 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A6UF                    TCGA-IB-A7LX 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-A7M4                    TCGA-IB-AAUM 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUN                    TCGA-IB-AAUO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUP                    TCGA-IB-AAUS 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUU                    TCGA-IB-AAUV 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-IB-AAUW                    TCGA-L1-A7W4 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-LB-A7SX                    TCGA-LB-A8F3 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-LB-A9Q5                    TCGA-M8-A5N4 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-OE-A75W                    TCGA-PZ-A5RE 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-Q3-A5QY                    TCGA-Q3-AA2A 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-RB-A7B8                    TCGA-RB-AA9M 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-S4-A8RM                    TCGA-S4-A8RO 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-S4-A8RP                    TCGA-US-A774 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-US-A779                    TCGA-US-A77E 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-US-A77G                    TCGA-US-A77J 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-XD-AAUL                    TCGA-XN-A8T5 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-YB-A89D                    TCGA-YH-A8SY 
"DEL PEAK  3(2Q14.3) WILD-TYPE" "DEL PEAK  3(2Q14.3) WILD-TYPE" 
                   TCGA-YY-A8LH 
"DEL PEAK  3(2Q14.3) WILD-TYPE" 
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        5      2      2
  DEL PEAK  3(2Q14.3) WILD-TYPE     78     46     44
D28V5, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           5                            78
  CLUS_2                           2                            46
  CLUS_3                           2                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        2      5      2
  DEL PEAK  3(2Q14.3) WILD-TYPE     72     70     26
D28V6, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           2                            72
  CLUS_2                           5                            70
  CLUS_3                           2                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(2Q14.3) MUTATED        5      2      0      2
  DEL PEAK  3(2Q14.3) WILD-TYPE     64     38     35     31
D28V7, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           5                            64
  CLUS_2                           2                            38
  CLUS_3                           0                            35
  CLUS_4                           2                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        6      1      2
  DEL PEAK  3(2Q14.3) WILD-TYPE     96     41     31
D28V8, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           6                            96
  CLUS_2                           1                            41
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        4      1      4
  DEL PEAK  3(2Q14.3) WILD-TYPE     65     66     33
D28V9, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           4                            65
  CLUS_2                           1                            66
  CLUS_3                           4                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(2Q14.3) MUTATED        6      1      2
  DEL PEAK  3(2Q14.3) WILD-TYPE     80     46     38
D28V10, multiclass
        clus
vv       DEL PEAK  3(2Q14.3) MUTATED DEL PEAK  3(2Q14.3) WILD-TYPE
  CLUS_1                           6                            80
  CLUS_2                           1                            46
  CLUS_3                           2                            38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = DEL PEAK  4(3P21.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       11     26     14
  DEL PEAK  4(3P21.31) WILD-TYPE     74     49     10
D29V1, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           11                             74
  CLUS_2                           26                             49
  CLUS_3                           14                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       25      9      6
  DEL PEAK  4(3P21.31) WILD-TYPE     45     33     27
D29V2, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           25                             45
  CLUS_2                            9                             33
  CLUS_3                            6                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(3P21.31) MUTATED       13      7      2      6      5
  DEL PEAK  4(3P21.31) WILD-TYPE     20     14     15     15      8
D29V3, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           13                             20
  CLUS_2                            7                             14
  CLUS_3                            2                             15
  CLUS_4                            6                             15
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(3P21.31) MUTATED        8      7     11      3      4
  DEL PEAK  4(3P21.31) WILD-TYPE     12     14     19     13     14
D29V4, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                            8                             12
  CLUS_2                            7                             14
  CLUS_3                           11                             19
  CLUS_4                            3                             13
  CLUS_5                            4                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       28     12      9
  DEL PEAK  4(3P21.31) WILD-TYPE     55     36     37
D29V5, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           28                             55
  CLUS_2                           12                             36
  CLUS_3                            9                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       19     23      7
  DEL PEAK  4(3P21.31) WILD-TYPE     55     52     21
D29V6, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           19                             55
  CLUS_2                           23                             52
  CLUS_3                            7                             21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(3P21.31) MUTATED       25      9      5     10
  DEL PEAK  4(3P21.31) WILD-TYPE     44     31     30     23
D29V7, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           25                             44
  CLUS_2                            9                             31
  CLUS_3                            5                             30
  CLUS_4                           10                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       35      6      8
  DEL PEAK  4(3P21.31) WILD-TYPE     67     36     25
D29V8, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           35                             67
  CLUS_2                            6                             36
  CLUS_3                            8                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       25     12     11
  DEL PEAK  4(3P21.31) WILD-TYPE     44     55     26
D29V9, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           25                             44
  CLUS_2                           12                             55
  CLUS_3                           11                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3P21.31) MUTATED       29     11      8
  DEL PEAK  4(3P21.31) WILD-TYPE     57     36     32
D29V10, multiclass
        clus
vv       DEL PEAK  4(3P21.31) MUTATED DEL PEAK  4(3P21.31) WILD-TYPE
  CLUS_1                           29                             57
  CLUS_2                           11                             36
  CLUS_3                            8                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = DEL PEAK  5(4P15.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED        7     19      4
  DEL PEAK  5(4P15.31) WILD-TYPE     78     56     20
D30V1, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                            7                             78
  CLUS_2                           19                             56
  CLUS_3                            4                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED       16      2      4
  DEL PEAK  5(4P15.31) WILD-TYPE     54     40     29
D30V2, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           16                             54
  CLUS_2                            2                             40
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(4P15.31) MUTATED        6      5      0      4      1
  DEL PEAK  5(4P15.31) WILD-TYPE     27     16     17     17     12
D30V3, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                            6                             27
  CLUS_2                            5                             16
  CLUS_3                            0                             17
  CLUS_4                            4                             17
  CLUS_5                            1                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(4P15.31) MUTATED        3      5      3      1      4
  DEL PEAK  5(4P15.31) WILD-TYPE     17     16     27     15     14
D30V4, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                            3                             17
  CLUS_2                            5                             16
  CLUS_3                            3                             27
  CLUS_4                            1                             15
  CLUS_5                            4                             14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED       20      4      5
  DEL PEAK  5(4P15.31) WILD-TYPE     63     44     41
D30V5, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           20                             63
  CLUS_2                            4                             44
  CLUS_3                            5                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED        8     19      2
  DEL PEAK  5(4P15.31) WILD-TYPE     66     56     26
D30V6, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                            8                             66
  CLUS_2                           19                             56
  CLUS_3                            2                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(4P15.31) MUTATED       14      4      7      4
  DEL PEAK  5(4P15.31) WILD-TYPE     55     36     28     29
D30V7, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           14                             55
  CLUS_2                            4                             36
  CLUS_3                            7                             28
  CLUS_4                            4                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED       24      2      3
  DEL PEAK  5(4P15.31) WILD-TYPE     78     40     30
D30V8, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           24                             78
  CLUS_2                            2                             40
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED       14      9      5
  DEL PEAK  5(4P15.31) WILD-TYPE     55     58     32
D30V9, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           14                             55
  CLUS_2                            9                             58
  CLUS_3                            5                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4P15.31) MUTATED       21      5      2
  DEL PEAK  5(4P15.31) WILD-TYPE     65     42     38
D30V10, multiclass
        clus
vv       DEL PEAK  5(4P15.31) MUTATED DEL PEAK  5(4P15.31) WILD-TYPE
  CLUS_1                           21                             65
  CLUS_2                            5                             42
  CLUS_3                            2                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  6(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED        9     16      2
  DEL PEAK  6(4Q22.1) WILD-TYPE     76     59     22
D31V1, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                           9                            76
  CLUS_2                          16                            59
  CLUS_3                           2                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED       13      1      5
  DEL PEAK  6(4Q22.1) WILD-TYPE     57     41     28
D31V2, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          13                            57
  CLUS_2                           1                            41
  CLUS_3                           5                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(4Q22.1) MUTATED        7      2      0      3      2
  DEL PEAK  6(4Q22.1) WILD-TYPE     26     19     17     18     11
D31V3, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                           7                            26
  CLUS_2                           2                            19
  CLUS_3                           0                            17
  CLUS_4                           3                            18
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(4Q22.1) MUTATED        4      3      4      0      3
  DEL PEAK  6(4Q22.1) WILD-TYPE     16     18     26     16     15
D31V4, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                           4                            16
  CLUS_2                           3                            18
  CLUS_3                           4                            26
  CLUS_4                           0                            16
  CLUS_5                           3                            15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED       15      1     10
  DEL PEAK  6(4Q22.1) WILD-TYPE     68     47     36
D31V5, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          15                            68
  CLUS_2                           1                            47
  CLUS_3                          10                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED        6     15      5
  DEL PEAK  6(4Q22.1) WILD-TYPE     68     60     23
D31V6, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                           6                            68
  CLUS_2                          15                            60
  CLUS_3                           5                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(4Q22.1) MUTATED       10      2      8      6
  DEL PEAK  6(4Q22.1) WILD-TYPE     59     38     27     27
D31V7, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          10                            59
  CLUS_2                           2                            38
  CLUS_3                           8                            27
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED       19      0      7
  DEL PEAK  6(4Q22.1) WILD-TYPE     83     42     26
D31V8, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          19                            83
  CLUS_2                           0                            42
  CLUS_3                           7                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED       12     11      2
  DEL PEAK  6(4Q22.1) WILD-TYPE     57     56     35
D31V9, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          12                            57
  CLUS_2                          11                            56
  CLUS_3                           2                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q22.1) MUTATED       18      1      6
  DEL PEAK  6(4Q22.1) WILD-TYPE     68     46     34
D31V10, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) MUTATED DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                          18                            68
  CLUS_2                           1                            46
  CLUS_3                           6                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  7(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED        9     23      3
  DEL PEAK  7(4Q34.3) WILD-TYPE     76     52     21
D32V1, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                           9                            76
  CLUS_2                          23                            52
  CLUS_3                           3                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       17      4      5
  DEL PEAK  7(4Q34.3) WILD-TYPE     53     38     28
D32V2, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          17                            53
  CLUS_2                           4                            38
  CLUS_3                           5                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q34.3) MUTATED        9      3      0      4      3
  DEL PEAK  7(4Q34.3) WILD-TYPE     24     18     17     17     10
D32V3, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                           9                            24
  CLUS_2                           3                            18
  CLUS_3                           0                            17
  CLUS_4                           4                            17
  CLUS_5                           3                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(4Q34.3) MUTATED        5      4      6      0      4
  DEL PEAK  7(4Q34.3) WILD-TYPE     15     17     24     16     14
D32V4, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                           5                            15
  CLUS_2                           4                            17
  CLUS_3                           6                            24
  CLUS_4                           0                            16
  CLUS_5                           4                            14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       19      5     10
  DEL PEAK  7(4Q34.3) WILD-TYPE     64     43     36
D32V5, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          19                            64
  CLUS_2                           5                            43
  CLUS_3                          10                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       12     17      5
  DEL PEAK  7(4Q34.3) WILD-TYPE     62     58     23
D32V6, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          12                            62
  CLUS_2                          17                            58
  CLUS_3                           5                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(4Q34.3) MUTATED       13      6      9      6
  DEL PEAK  7(4Q34.3) WILD-TYPE     56     34     26     27
D32V7, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          13                            56
  CLUS_2                           6                            34
  CLUS_3                           9                            26
  CLUS_4                           6                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       23      4      7
  DEL PEAK  7(4Q34.3) WILD-TYPE     79     38     26
D32V8, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          23                            79
  CLUS_2                           4                            38
  CLUS_3                           7                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       15     13      5
  DEL PEAK  7(4Q34.3) WILD-TYPE     54     54     32
D32V9, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          15                            54
  CLUS_2                          13                            54
  CLUS_3                           5                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(4Q34.3) MUTATED       21      6      6
  DEL PEAK  7(4Q34.3) WILD-TYPE     65     41     34
D32V10, multiclass
        clus
vv       DEL PEAK  7(4Q34.3) MUTATED DEL PEAK  7(4Q34.3) WILD-TYPE
  CLUS_1                          21                            65
  CLUS_2                           6                            41
  CLUS_3                           6                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  8(5Q14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED        4     24      7
  DEL PEAK  8(5Q14.2) WILD-TYPE     81     51     17
D33V1, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                           4                            81
  CLUS_2                          24                            51
  CLUS_3                           7                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       19      6      4
  DEL PEAK  8(5Q14.2) WILD-TYPE     51     36     29
D33V2, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          19                            51
  CLUS_2                           6                            36
  CLUS_3                           4                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(5Q14.2) MUTATED       10      4      1      2      5
  DEL PEAK  8(5Q14.2) WILD-TYPE     23     17     16     19      8
D33V3, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          10                            23
  CLUS_2                           4                            17
  CLUS_3                           1                            16
  CLUS_4                           2                            19
  CLUS_5                           5                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(5Q14.2) MUTATED        6      4      9      2      1
  DEL PEAK  8(5Q14.2) WILD-TYPE     14     17     21     14     17
D33V4, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                           6                            14
  CLUS_2                           4                            17
  CLUS_3                           9                            21
  CLUS_4                           2                            14
  CLUS_5                           1                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       20      9      5
  DEL PEAK  8(5Q14.2) WILD-TYPE     63     39     41
D33V5, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          20                            63
  CLUS_2                           9                            39
  CLUS_3                           5                            41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       16     16      2
  DEL PEAK  8(5Q14.2) WILD-TYPE     58     59     26
D33V6, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          16                            58
  CLUS_2                          16                            59
  CLUS_3                           2                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(5Q14.2) MUTATED       18      8      6      2
  DEL PEAK  8(5Q14.2) WILD-TYPE     51     32     29     31
D33V7, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          18                            51
  CLUS_2                           8                            32
  CLUS_3                           6                            29
  CLUS_4                           2                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       24      7      3
  DEL PEAK  8(5Q14.2) WILD-TYPE     78     35     30
D33V8, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          24                            78
  CLUS_2                           7                            35
  CLUS_3                           3                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       17      7      8
  DEL PEAK  8(5Q14.2) WILD-TYPE     52     60     29
D33V9, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          17                            52
  CLUS_2                           7                            60
  CLUS_3                           8                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(5Q14.2) MUTATED       20      9      3
  DEL PEAK  8(5Q14.2) WILD-TYPE     66     38     37
D33V10, multiclass
        clus
vv       DEL PEAK  8(5Q14.2) MUTATED DEL PEAK  8(5Q14.2) WILD-TYPE
  CLUS_1                          20                            66
  CLUS_2                           9                            38
  CLUS_3                           3                            37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  9(6P25.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       15     45     14
  DEL PEAK  9(6P25.2) WILD-TYPE     70     30     10
D34V1, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          15                            70
  CLUS_2                          45                            30
  CLUS_3                          14                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       44      8      6
  DEL PEAK  9(6P25.2) WILD-TYPE     26     34     27
D34V2, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          44                            26
  CLUS_2                           8                            34
  CLUS_3                           6                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(6P25.2) MUTATED       23      7      4      5      5
  DEL PEAK  9(6P25.2) WILD-TYPE     10     14     13     16      8
D34V3, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          23                            10
  CLUS_2                           7                            14
  CLUS_3                           4                            13
  CLUS_4                           5                            16
  CLUS_5                           5                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(6P25.2) MUTATED       13      7     14      5      5
  DEL PEAK  9(6P25.2) WILD-TYPE      7     14     16     11     13
D34V4, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          13                             7
  CLUS_2                           7                            14
  CLUS_3                          14                            16
  CLUS_4                           5                            11
  CLUS_5                           5                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       39     20     11
  DEL PEAK  9(6P25.2) WILD-TYPE     44     28     35
D34V5, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          39                            44
  CLUS_2                          20                            28
  CLUS_3                          11                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       28     37      5
  DEL PEAK  9(6P25.2) WILD-TYPE     46     38     23
D34V6, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          28                            46
  CLUS_2                          37                            38
  CLUS_3                           5                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(6P25.2) MUTATED       35     15     10     10
  DEL PEAK  9(6P25.2) WILD-TYPE     34     25     25     23
D34V7, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          35                            34
  CLUS_2                          15                            25
  CLUS_3                          10                            25
  CLUS_4                          10                            23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       53     10      7
  DEL PEAK  9(6P25.2) WILD-TYPE     49     32     26
D34V8, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          53                            49
  CLUS_2                          10                            32
  CLUS_3                           7                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       36     16     18
  DEL PEAK  9(6P25.2) WILD-TYPE     33     51     19
D34V9, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          36                            33
  CLUS_2                          16                            51
  CLUS_3                          18                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(6P25.2) MUTATED       46     18      6
  DEL PEAK  9(6P25.2) WILD-TYPE     40     29     34
D34V10, multiclass
        clus
vv       DEL PEAK  9(6P25.2) MUTATED DEL PEAK  9(6P25.2) WILD-TYPE
  CLUS_1                          46                            40
  CLUS_2                          18                            29
  CLUS_3                           6                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK 10(6P22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       16     41     13
  DEL PEAK 10(6P22.2) WILD-TYPE     69     34     11
D35V1, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          16                            69
  CLUS_2                          41                            34
  CLUS_3                          13                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       41      8      6
  DEL PEAK 10(6P22.2) WILD-TYPE     29     34     27
D35V2, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          41                            29
  CLUS_2                           8                            34
  CLUS_3                           6                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P22.2) MUTATED       21      8      4      5      4
  DEL PEAK 10(6P22.2) WILD-TYPE     12     13     13     16      9
D35V3, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          21                            12
  CLUS_2                           8                            13
  CLUS_3                           4                            13
  CLUS_4                           5                            16
  CLUS_5                           4                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(6P22.2) MUTATED       12      8     12      5      5
  DEL PEAK 10(6P22.2) WILD-TYPE      8     13     18     11     13
D35V4, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          12                             8
  CLUS_2                           8                            13
  CLUS_3                          12                            18
  CLUS_4                           5                            11
  CLUS_5                           5                            13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       36     19     11
  DEL PEAK 10(6P22.2) WILD-TYPE     47     29     35
D35V5, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          36                            47
  CLUS_2                          19                            29
  CLUS_3                          11                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       26     35      5
  DEL PEAK 10(6P22.2) WILD-TYPE     48     40     23
D35V6, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          26                            48
  CLUS_2                          35                            40
  CLUS_3                           5                            23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(6P22.2) MUTATED       32     14     11      9
  DEL PEAK 10(6P22.2) WILD-TYPE     37     26     24     24
D35V7, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          32                            37
  CLUS_2                          14                            26
  CLUS_3                          11                            24
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       50      9      7
  DEL PEAK 10(6P22.2) WILD-TYPE     52     33     26
D35V8, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          50                            52
  CLUS_2                           9                            33
  CLUS_3                           7                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       33     15     18
  DEL PEAK 10(6P22.2) WILD-TYPE     36     52     19
D35V9, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          33                            36
  CLUS_2                          15                            52
  CLUS_3                          18                            19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(6P22.2) MUTATED       45     15      6
  DEL PEAK 10(6P22.2) WILD-TYPE     41     32     34
D35V10, multiclass
        clus
vv       DEL PEAK 10(6P22.2) MUTATED DEL PEAK 10(6P22.2) WILD-TYPE
  CLUS_1                          45                            41
  CLUS_2                          15                            32
  CLUS_3                           6                            34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK 11(6Q25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       21     54     16
  DEL PEAK 11(6Q25.3) WILD-TYPE     64     21      8
D36V1, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          21                            64
  CLUS_2                          54                            21
  CLUS_3                          16                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       50     11     11
  DEL PEAK 11(6Q25.3) WILD-TYPE     20     31     22
D36V2, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          50                            20
  CLUS_2                          11                            31
  CLUS_3                          11                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q25.3) MUTATED       25     10      5      8      8
  DEL PEAK 11(6Q25.3) WILD-TYPE      8     11     12     13      5
D36V3, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          25                             8
  CLUS_2                          10                            11
  CLUS_3                           5                            12
  CLUS_4                           8                            13
  CLUS_5                           8                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(6Q25.3) MUTATED       14     11     20      5      6
  DEL PEAK 11(6Q25.3) WILD-TYPE      6     10     10     11     12
D36V4, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          14                             6
  CLUS_2                          11                            10
  CLUS_3                          20                            10
  CLUS_4                           5                            11
  CLUS_5                           6                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       52     21     13
  DEL PEAK 11(6Q25.3) WILD-TYPE     31     27     33
D36V5, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          52                            31
  CLUS_2                          21                            27
  CLUS_3                          13                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       34     45      7
  DEL PEAK 11(6Q25.3) WILD-TYPE     40     30     21
D36V6, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          34                            40
  CLUS_2                          45                            30
  CLUS_3                           7                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(6Q25.3) MUTATED       45     16     14     11
  DEL PEAK 11(6Q25.3) WILD-TYPE     24     24     21     22
D36V7, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          45                            24
  CLUS_2                          16                            24
  CLUS_3                          14                            21
  CLUS_4                          11                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       63     12     11
  DEL PEAK 11(6Q25.3) WILD-TYPE     39     30     22
D36V8, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          63                            39
  CLUS_2                          12                            30
  CLUS_3                          11                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       47     17     21
  DEL PEAK 11(6Q25.3) WILD-TYPE     22     50     16
D36V9, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          47                            22
  CLUS_2                          17                            50
  CLUS_3                          21                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(6Q25.3) MUTATED       54     22      9
  DEL PEAK 11(6Q25.3) WILD-TYPE     32     25     31
D36V10, multiclass
        clus
vv       DEL PEAK 11(6Q25.3) MUTATED DEL PEAK 11(6Q25.3) WILD-TYPE
  CLUS_1                          54                            32
  CLUS_2                          22                            25
  CLUS_3                           9                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK 12(7Q36.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED        1     10      4
  DEL PEAK 12(7Q36.1) WILD-TYPE     84     65     20
D37V1, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           1                            84
  CLUS_2                          10                            65
  CLUS_3                           4                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED        8      1      3
  DEL PEAK 12(7Q36.1) WILD-TYPE     62     41     30
D37V2, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           8                            62
  CLUS_2                           1                            41
  CLUS_3                           3                            30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(7Q36.1) MUTATED        2      4      0      1      2
  DEL PEAK 12(7Q36.1) WILD-TYPE     31     17     17     20     11
D37V3, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           2                            31
  CLUS_2                           4                            17
  CLUS_3                           0                            17
  CLUS_4                           1                            20
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(7Q36.1) MUTATED        0      5      3      0      1
  DEL PEAK 12(7Q36.1) WILD-TYPE     20     16     27     16     17
D37V4, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           0                            20
  CLUS_2                           5                            16
  CLUS_3                           3                            27
  CLUS_4                           0                            16
  CLUS_5                           1                            17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED       10      2      2
  DEL PEAK 12(7Q36.1) WILD-TYPE     73     46     44
D37V5, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                          10                            73
  CLUS_2                           2                            46
  CLUS_3                           2                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED        5      8      1
  DEL PEAK 12(7Q36.1) WILD-TYPE     69     67     27
D37V6, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           5                            69
  CLUS_2                           8                            67
  CLUS_3                           1                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(7Q36.1) MUTATED        7      3      2      2
  DEL PEAK 12(7Q36.1) WILD-TYPE     62     37     33     31
D37V7, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           7                            62
  CLUS_2                           3                            37
  CLUS_3                           2                            33
  CLUS_4                           2                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED       11      2      1
  DEL PEAK 12(7Q36.1) WILD-TYPE     91     40     32
D37V8, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                          11                            91
  CLUS_2                           2                            40
  CLUS_3                           1                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED       10      3      1
  DEL PEAK 12(7Q36.1) WILD-TYPE     59     64     36
D37V9, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                          10                            59
  CLUS_2                           3                            64
  CLUS_3                           1                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(7Q36.1) MUTATED       10      3      1
  DEL PEAK 12(7Q36.1) WILD-TYPE     76     44     39
D37V10, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                          10                            76
  CLUS_2                           3                            44
  CLUS_3                           1                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK 13(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       14     33     11
  DEL PEAK 13(8P23.2) WILD-TYPE     71     42     13
D38V1, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          14                            71
  CLUS_2                          33                            42
  CLUS_3                          11                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       29      8      7
  DEL PEAK 13(8P23.2) WILD-TYPE     41     34     26
D38V2, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          29                            41
  CLUS_2                           8                            34
  CLUS_3                           7                            26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(8P23.2) MUTATED       15      4      4      4      6
  DEL PEAK 13(8P23.2) WILD-TYPE     18     17     13     17      7
D38V3, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          15                            18
  CLUS_2                           4                            17
  CLUS_3                           4                            13
  CLUS_4                           4                            17
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(8P23.2) MUTATED        9      5     13      4      2
  DEL PEAK 13(8P23.2) WILD-TYPE     11     16     17     12     16
D38V4, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                           9                            11
  CLUS_2                           5                            16
  CLUS_3                          13                            17
  CLUS_4                           4                            12
  CLUS_5                           2                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       30     16     11
  DEL PEAK 13(8P23.2) WILD-TYPE     53     32     35
D38V5, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          30                            53
  CLUS_2                          16                            32
  CLUS_3                          11                            35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       23     28      6
  DEL PEAK 13(8P23.2) WILD-TYPE     51     47     22
D38V6, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          23                            51
  CLUS_2                          28                            47
  CLUS_3                           6                            22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(8P23.2) MUTATED       29     11      8      9
  DEL PEAK 13(8P23.2) WILD-TYPE     40     29     27     24
D38V7, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          29                            40
  CLUS_2                          11                            29
  CLUS_3                           8                            27
  CLUS_4                           9                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       39     10      8
  DEL PEAK 13(8P23.2) WILD-TYPE     63     32     25
D38V8, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          39                            63
  CLUS_2                          10                            32
  CLUS_3                           8                            25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       25     14     17
  DEL PEAK 13(8P23.2) WILD-TYPE     44     53     20
D38V9, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          25                            44
  CLUS_2                          14                            53
  CLUS_3                          17                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(8P23.2) MUTATED       32     17      7
  DEL PEAK 13(8P23.2) WILD-TYPE     54     30     33
D38V10, multiclass
        clus
vv       DEL PEAK 13(8P23.2) MUTATED DEL PEAK 13(8P23.2) WILD-TYPE
  CLUS_1                          32                            54
  CLUS_2                          17                            30
  CLUS_3                           7                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK 14(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       31     69     16
  DEL PEAK 14(9P21.3) WILD-TYPE     54      6      8
D39V1, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          31                            54
  CLUS_2                          69                             6
  CLUS_3                          16                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       60     13     15
  DEL PEAK 14(9P21.3) WILD-TYPE     10     29     18
D39V2, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          60                            10
  CLUS_2                          13                            29
  CLUS_3                          15                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(9P21.3) MUTATED       27     15      6     12     10
  DEL PEAK 14(9P21.3) WILD-TYPE      6      6     11      9      3
D39V3, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          27                             6
  CLUS_2                          15                             6
  CLUS_3                           6                            11
  CLUS_4                          12                             9
  CLUS_5                          10                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(9P21.3) MUTATED       16     16     22      7      9
  DEL PEAK 14(9P21.3) WILD-TYPE      4      5      8      9      9
D39V4, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          16                             4
  CLUS_2                          16                             5
  CLUS_3                          22                             8
  CLUS_4                           7                             9
  CLUS_5                           9                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       68     26     15
  DEL PEAK 14(9P21.3) WILD-TYPE     15     22     31
D39V5, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          68                            15
  CLUS_2                          26                            22
  CLUS_3                          15                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       44     57      8
  DEL PEAK 14(9P21.3) WILD-TYPE     30     18     20
D39V6, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          44                            30
  CLUS_2                          57                            18
  CLUS_3                           8                            20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(9P21.3) MUTATED       60     20     18     11
  DEL PEAK 14(9P21.3) WILD-TYPE      9     20     17     22
D39V7, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          60                             9
  CLUS_2                          20                            20
  CLUS_3                          18                            17
  CLUS_4                          11                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       80     17     12
  DEL PEAK 14(9P21.3) WILD-TYPE     22     25     21
D39V8, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          80                            22
  CLUS_2                          17                            25
  CLUS_3                          12                            21
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       60     26     22
  DEL PEAK 14(9P21.3) WILD-TYPE      9     41     15
D39V9, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          60                             9
  CLUS_2                          26                            41
  CLUS_3                          22                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9P21.3) MUTATED       68     28     12
  DEL PEAK 14(9P21.3) WILD-TYPE     18     19     28
D39V10, multiclass
        clus
vv       DEL PEAK 14(9P21.3) MUTATED DEL PEAK 14(9P21.3) WILD-TYPE
  CLUS_1                          68                            18
  CLUS_2                          28                            19
  CLUS_3                          12                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 15(9Q22.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       15     25      7
  DEL PEAK 15(9Q22.33) WILD-TYPE     70     50     17
D40V1, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           15                             70
  CLUS_2                           25                             50
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       19     10      8
  DEL PEAK 15(9Q22.33) WILD-TYPE     51     32     25
D40V2, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           19                             51
  CLUS_2                           10                             32
  CLUS_3                            8                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(9Q22.33) MUTATED        9      9      2      5      5
  DEL PEAK 15(9Q22.33) WILD-TYPE     24     12     15     16      8
D40V3, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                            9                             24
  CLUS_2                            9                             12
  CLUS_3                            2                             15
  CLUS_4                            5                             16
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(9Q22.33) MUTATED        4     10      8      3      5
  DEL PEAK 15(9Q22.33) WILD-TYPE     16     11     22     13     13
D40V4, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                            4                             16
  CLUS_2                           10                             11
  CLUS_3                            8                             22
  CLUS_4                            3                             13
  CLUS_5                            5                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       23     13      6
  DEL PEAK 15(9Q22.33) WILD-TYPE     60     35     40
D40V5, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           23                             60
  CLUS_2                           13                             35
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       20     18      4
  DEL PEAK 15(9Q22.33) WILD-TYPE     54     57     24
D40V6, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           20                             54
  CLUS_2                           18                             57
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(9Q22.33) MUTATED       22      9      8      3
  DEL PEAK 15(9Q22.33) WILD-TYPE     47     31     27     30
D40V7, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           22                             47
  CLUS_2                            9                             31
  CLUS_3                            8                             27
  CLUS_4                            3                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       30      8      4
  DEL PEAK 15(9Q22.33) WILD-TYPE     72     34     29
D40V8, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           30                             72
  CLUS_2                            8                             34
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       21     11      9
  DEL PEAK 15(9Q22.33) WILD-TYPE     48     56     28
D40V9, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           21                             48
  CLUS_2                           11                             56
  CLUS_3                            9                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(9Q22.33) MUTATED       25     11      5
  DEL PEAK 15(9Q22.33) WILD-TYPE     61     36     35
D40V10, multiclass
        clus
vv       DEL PEAK 15(9Q22.33) MUTATED DEL PEAK 15(9Q22.33) WILD-TYPE
  CLUS_1                           25                             61
  CLUS_2                           11                             36
  CLUS_3                            5                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 16(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       10     20     11
  DEL PEAK 16(10P15.3) WILD-TYPE     75     55     13
D41V1, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           10                             75
  CLUS_2                           20                             55
  CLUS_3                           11                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       20      6      3
  DEL PEAK 16(10P15.3) WILD-TYPE     50     36     30
D41V2, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           20                             50
  CLUS_2                            6                             36
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(10P15.3) MUTATED        7      4      2      1      3
  DEL PEAK 16(10P15.3) WILD-TYPE     26     17     15     20     10
D41V3, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                            7                             26
  CLUS_2                            4                             17
  CLUS_3                            2                             15
  CLUS_4                            1                             20
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(10P15.3) MUTATED        5      4      5      2      1
  DEL PEAK 16(10P15.3) WILD-TYPE     15     17     25     14     17
D41V4, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                            5                             15
  CLUS_2                            4                             17
  CLUS_3                            5                             25
  CLUS_4                            2                             14
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       25      5     10
  DEL PEAK 16(10P15.3) WILD-TYPE     58     43     36
D41V5, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           25                             58
  CLUS_2                            5                             43
  CLUS_3                           10                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       10     25      5
  DEL PEAK 16(10P15.3) WILD-TYPE     64     50     23
D41V6, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           10                             64
  CLUS_2                           25                             50
  CLUS_3                            5                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(10P15.3) MUTATED       20      4      7      9
  DEL PEAK 16(10P15.3) WILD-TYPE     49     36     28     24
D41V7, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           20                             49
  CLUS_2                            4                             36
  CLUS_3                            7                             28
  CLUS_4                            9                             24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       30      4      6
  DEL PEAK 16(10P15.3) WILD-TYPE     72     38     27
D41V8, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           30                             72
  CLUS_2                            4                             38
  CLUS_3                            6                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       21      9      9
  DEL PEAK 16(10P15.3) WILD-TYPE     48     58     28
D41V9, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           21                             48
  CLUS_2                            9                             58
  CLUS_3                            9                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(10P15.3) MUTATED       28      7      4
  DEL PEAK 16(10P15.3) WILD-TYPE     58     40     36
D41V10, multiclass
        clus
vv       DEL PEAK 16(10P15.3) MUTATED DEL PEAK 16(10P15.3) WILD-TYPE
  CLUS_1                           28                             58
  CLUS_2                            7                             40
  CLUS_3                            4                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 17(10Q23.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED        7     18     10
  DEL PEAK 17(10Q23.33) WILD-TYPE     78     57     14
D42V1, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                             7                              78
  CLUS_2                            18                              57
  CLUS_3                            10                              14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       15      7      3
  DEL PEAK 17(10Q23.33) WILD-TYPE     55     35     30
D42V2, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            15                              55
  CLUS_2                             7                              35
  CLUS_3                             3                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(10Q23.33) MUTATED        6      4      2      2      5
  DEL PEAK 17(10Q23.33) WILD-TYPE     27     17     15     19      8
D42V3, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                             6                              27
  CLUS_2                             4                              17
  CLUS_3                             2                              15
  CLUS_4                             2                              19
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(10Q23.33) MUTATED        3      4      8      3      1
  DEL PEAK 17(10Q23.33) WILD-TYPE     17     17     22     13     17
D42V4, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                             3                              17
  CLUS_2                             4                              17
  CLUS_3                             8                              22
  CLUS_4                             3                              13
  CLUS_5                             1                              17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       18      6      9
  DEL PEAK 17(10Q23.33) WILD-TYPE     65     42     37
D42V5, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            18                              65
  CLUS_2                             6                              42
  CLUS_3                             9                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       10     19      4
  DEL PEAK 17(10Q23.33) WILD-TYPE     64     56     24
D42V6, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            10                              64
  CLUS_2                            19                              56
  CLUS_3                             4                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(10Q23.33) MUTATED       12      6      7      8
  DEL PEAK 17(10Q23.33) WILD-TYPE     57     34     28     25
D42V7, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            12                              57
  CLUS_2                             6                              34
  CLUS_3                             7                              28
  CLUS_4                             8                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       22      6      5
  DEL PEAK 17(10Q23.33) WILD-TYPE     80     36     28
D42V8, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            22                              80
  CLUS_2                             6                              36
  CLUS_3                             5                              28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       14     10      8
  DEL PEAK 17(10Q23.33) WILD-TYPE     55     57     29
D42V9, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            14                              55
  CLUS_2                            10                              57
  CLUS_3                             8                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(10Q23.33) MUTATED       20      9      3
  DEL PEAK 17(10Q23.33) WILD-TYPE     66     38     37
D42V10, multiclass
        clus
vv       DEL PEAK 17(10Q23.33) MUTATED DEL PEAK 17(10Q23.33) WILD-TYPE
  CLUS_1                            20                              66
  CLUS_2                             9                              38
  CLUS_3                             3                              37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 18(11P15.4) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED        5     16      8
  DEL PEAK 18(11P15.4) WILD-TYPE     80     59     16
D43V1, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                            5                             80
  CLUS_2                           16                             59
  CLUS_3                            8                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       12      7      4
  DEL PEAK 18(11P15.4) WILD-TYPE     58     35     29
D43V2, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           12                             58
  CLUS_2                            7                             35
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(11P15.4) MUTATED        9      1      1      1      6
  DEL PEAK 18(11P15.4) WILD-TYPE     24     20     16     20      7
D43V3, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                            9                             24
  CLUS_2                            1                             20
  CLUS_3                            1                             16
  CLUS_4                            1                             20
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(11P15.4) MUTATED        6      2      8      2      0
  DEL PEAK 18(11P15.4) WILD-TYPE     14     19     22     14     18
D43V4, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                            6                             14
  CLUS_2                            2                             19
  CLUS_3                            8                             22
  CLUS_4                            2                             14
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       13      8      6
  DEL PEAK 18(11P15.4) WILD-TYPE     70     40     40
D43V5, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           13                             70
  CLUS_2                            8                             40
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       12     10      5
  DEL PEAK 18(11P15.4) WILD-TYPE     62     65     23
D43V6, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           12                             62
  CLUS_2                           10                             65
  CLUS_3                            5                             23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(11P15.4) MUTATED       14      5      3      5
  DEL PEAK 18(11P15.4) WILD-TYPE     55     35     32     28
D43V7, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           14                             55
  CLUS_2                            5                             35
  CLUS_3                            3                             32
  CLUS_4                            5                             28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       15      5      7
  DEL PEAK 18(11P15.4) WILD-TYPE     87     37     26
D43V8, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           15                             87
  CLUS_2                            5                             37
  CLUS_3                            7                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       12      6      8
  DEL PEAK 18(11P15.4) WILD-TYPE     57     61     29
D43V9, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           12                             57
  CLUS_2                            6                             61
  CLUS_3                            8                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11P15.4) MUTATED       13      7      6
  DEL PEAK 18(11P15.4) WILD-TYPE     73     40     34
D43V10, multiclass
        clus
vv       DEL PEAK 18(11P15.4) MUTATED DEL PEAK 18(11P15.4) WILD-TYPE
  CLUS_1                           13                             73
  CLUS_2                            7                             40
  CLUS_3                            6                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 19(12P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED        4     23      2
  DEL PEAK 19(12P13.1) WILD-TYPE     81     52     22
D44V1, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                            4                             81
  CLUS_2                           23                             52
  CLUS_3                            2                             22
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED       21      0      2
  DEL PEAK 19(12P13.1) WILD-TYPE     49     42     31
D44V2, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           21                             49
  CLUS_2                            0                             42
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(12P13.1) MUTATED       10      2      1      0      2
  DEL PEAK 19(12P13.1) WILD-TYPE     23     19     16     21     11
D44V3, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           10                             23
  CLUS_2                            2                             19
  CLUS_3                            1                             16
  CLUS_4                            0                             21
  CLUS_5                            2                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(12P13.1) MUTATED        6      3      4      1      1
  DEL PEAK 19(12P13.1) WILD-TYPE     14     18     26     15     17
D44V4, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                            6                             14
  CLUS_2                            3                             18
  CLUS_3                            4                             26
  CLUS_4                            1                             15
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED       20      4      3
  DEL PEAK 19(12P13.1) WILD-TYPE     63     44     43
D44V5, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           20                             63
  CLUS_2                            4                             44
  CLUS_3                            3                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED        6     20      1
  DEL PEAK 19(12P13.1) WILD-TYPE     68     55     27
D44V6, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                            6                             68
  CLUS_2                           20                             55
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(12P13.1) MUTATED       19      2      4      2
  DEL PEAK 19(12P13.1) WILD-TYPE     50     38     31     31
D44V7, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           19                             50
  CLUS_2                            2                             38
  CLUS_3                            4                             31
  CLUS_4                            2                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED       25      0      2
  DEL PEAK 19(12P13.1) WILD-TYPE     77     42     31
D44V8, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           25                             77
  CLUS_2                            0                             42
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED       17      6      3
  DEL PEAK 19(12P13.1) WILD-TYPE     52     61     34
D44V9, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           17                             52
  CLUS_2                            6                             61
  CLUS_3                            3                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12P13.1) MUTATED       22      2      2
  DEL PEAK 19(12P13.1) WILD-TYPE     64     45     38
D44V10, multiclass
        clus
vv       DEL PEAK 19(12P13.1) MUTATED DEL PEAK 19(12P13.1) WILD-TYPE
  CLUS_1                           22                             64
  CLUS_2                            2                             45
  CLUS_3                            2                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 20(12Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED        1     23      1
  DEL PEAK 20(12Q12) WILD-TYPE     84     52     23
D45V1, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                          1                           84
  CLUS_2                         23                           52
  CLUS_3                          1                           23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED       16      1      1
  DEL PEAK 20(12Q12) WILD-TYPE     54     41     32
D45V2, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         16                           54
  CLUS_2                          1                           41
  CLUS_3                          1                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(12Q12) MUTATED        8      1      0      0      3
  DEL PEAK 20(12Q12) WILD-TYPE     25     20     17     21     10
D45V3, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                          8                           25
  CLUS_2                          1                           20
  CLUS_3                          0                           17
  CLUS_4                          0                           21
  CLUS_5                          3                           10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(12Q12) MUTATED        4      1      7      0      0
  DEL PEAK 20(12Q12) WILD-TYPE     16     20     23     16     18
D45V4, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                          4                           16
  CLUS_2                          1                           20
  CLUS_3                          7                           23
  CLUS_4                          0                           16
  CLUS_5                          0                           18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED       18      5      1
  DEL PEAK 20(12Q12) WILD-TYPE     65     43     45
D45V5, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         18                           65
  CLUS_2                          5                           43
  CLUS_3                          1                           45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED        6     18      0
  DEL PEAK 20(12Q12) WILD-TYPE     68     57     28
D45V6, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                          6                           68
  CLUS_2                         18                           57
  CLUS_3                          0                           28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(12Q12) MUTATED       18      3      2      1
  DEL PEAK 20(12Q12) WILD-TYPE     51     37     33     32
D45V7, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         18                           51
  CLUS_2                          3                           37
  CLUS_3                          2                           33
  CLUS_4                          1                           32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED       20      3      1
  DEL PEAK 20(12Q12) WILD-TYPE     82     39     32
D45V8, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         20                           82
  CLUS_2                          3                           39
  CLUS_3                          1                           32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED       17      3      3
  DEL PEAK 20(12Q12) WILD-TYPE     52     64     34
D45V9, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         17                           52
  CLUS_2                          3                           64
  CLUS_3                          3                           34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q12) MUTATED       17      6      0
  DEL PEAK 20(12Q12) WILD-TYPE     69     41     40
D45V10, multiclass
        clus
vv       DEL PEAK 20(12Q12) MUTATED DEL PEAK 20(12Q12) WILD-TYPE
  CLUS_1                         17                           69
  CLUS_2                          6                           41
  CLUS_3                          0                           40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 21(12Q21.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED        6     33      5
  DEL PEAK 21(12Q21.33) WILD-TYPE     79     42     19
D46V1, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                             6                              79
  CLUS_2                            33                              42
  CLUS_3                             5                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       25      4      3
  DEL PEAK 21(12Q21.33) WILD-TYPE     45     38     30
D46V2, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            25                              45
  CLUS_2                             4                              38
  CLUS_3                             3                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(12Q21.33) MUTATED       14      2      1      2      4
  DEL PEAK 21(12Q21.33) WILD-TYPE     19     19     16     19      9
D46V3, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            14                              19
  CLUS_2                             2                              19
  CLUS_3                             1                              16
  CLUS_4                             2                              19
  CLUS_5                             4                               9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(12Q21.33) MUTATED        8      2     11      1      1
  DEL PEAK 21(12Q21.33) WILD-TYPE     12     19     19     15     17
D46V4, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                             8                              12
  CLUS_2                             2                              19
  CLUS_3                            11                              19
  CLUS_4                             1                              15
  CLUS_5                             1                              17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       27     11      4
  DEL PEAK 21(12Q21.33) WILD-TYPE     56     37     42
D46V5, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            27                              56
  CLUS_2                            11                              37
  CLUS_3                             4                              42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       15     26      1
  DEL PEAK 21(12Q21.33) WILD-TYPE     59     49     27
D46V6, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            15                              59
  CLUS_2                            26                              49
  CLUS_3                             1                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(12Q21.33) MUTATED       26      8      4      4
  DEL PEAK 21(12Q21.33) WILD-TYPE     43     32     31     29
D46V7, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            26                              43
  CLUS_2                             8                              32
  CLUS_3                             4                              31
  CLUS_4                             4                              29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       33      6      3
  DEL PEAK 21(12Q21.33) WILD-TYPE     69     36     30
D46V8, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            33                              69
  CLUS_2                             6                              36
  CLUS_3                             3                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       25      8      8
  DEL PEAK 21(12Q21.33) WILD-TYPE     44     59     29
D46V9, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            25                              44
  CLUS_2                             8                              59
  CLUS_3                             8                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(12Q21.33) MUTATED       28     11      2
  DEL PEAK 21(12Q21.33) WILD-TYPE     58     36     38
D46V10, multiclass
        clus
vv       DEL PEAK 21(12Q21.33) MUTATED DEL PEAK 21(12Q21.33) WILD-TYPE
  CLUS_1                            28                              58
  CLUS_2                            11                              36
  CLUS_3                             2                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 22(12Q24.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED        7     30      6
  DEL PEAK 22(12Q24.33) WILD-TYPE     78     45     18
D47V1, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                             7                              78
  CLUS_2                            30                              45
  CLUS_3                             6                              18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       24      4      3
  DEL PEAK 22(12Q24.33) WILD-TYPE     46     38     30
D47V2, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            24                              46
  CLUS_2                             4                              38
  CLUS_3                             3                              30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(12Q24.33) MUTATED       13      3      0      2      3
  DEL PEAK 22(12Q24.33) WILD-TYPE     20     18     17     19     10
D47V3, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            13                              20
  CLUS_2                             3                              18
  CLUS_3                             0                              17
  CLUS_4                             2                              19
  CLUS_5                             3                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(12Q24.33) MUTATED        7      3     10      0      1
  DEL PEAK 22(12Q24.33) WILD-TYPE     13     18     20     16     17
D47V4, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                             7                              13
  CLUS_2                             3                              18
  CLUS_3                            10                              20
  CLUS_4                             0                              16
  CLUS_5                             1                              17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       28     10      3
  DEL PEAK 22(12Q24.33) WILD-TYPE     55     38     43
D47V5, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            28                              55
  CLUS_2                            10                              38
  CLUS_3                             3                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       15     25      1
  DEL PEAK 22(12Q24.33) WILD-TYPE     59     50     27
D47V6, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            15                              59
  CLUS_2                            25                              50
  CLUS_3                             1                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(12Q24.33) MUTATED       26      7      5      3
  DEL PEAK 22(12Q24.33) WILD-TYPE     43     33     30     30
D47V7, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            26                              43
  CLUS_2                             7                              33
  CLUS_3                             5                              30
  CLUS_4                             3                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       34      5      2
  DEL PEAK 22(12Q24.33) WILD-TYPE     68     37     31
D47V8, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            34                              68
  CLUS_2                             5                              37
  CLUS_3                             2                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       24      8      8
  DEL PEAK 22(12Q24.33) WILD-TYPE     45     59     29
D47V9, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            24                              45
  CLUS_2                             8                              59
  CLUS_3                             8                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(12Q24.33) MUTATED       29     10      1
  DEL PEAK 22(12Q24.33) WILD-TYPE     57     37     39
D47V10, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            29                              57
  CLUS_2                            10                              37
  CLUS_3                             1                              39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 23(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED        3     11      6
  DEL PEAK 23(13Q14.2) WILD-TYPE     82     64     18
D48V1, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                            3                             82
  CLUS_2                           11                             64
  CLUS_3                            6                             18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED       12      3      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     58     39     32
D48V2, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           12                             58
  CLUS_2                            3                             39
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(13Q14.2) MUTATED        3      3      1      3      2
  DEL PEAK 23(13Q14.2) WILD-TYPE     30     18     16     18     11
D48V3, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                            3                             30
  CLUS_2                            3                             18
  CLUS_3                            1                             16
  CLUS_4                            3                             18
  CLUS_5                            2                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(13Q14.2) MUTATED        2      3      4      2      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     18     18     26     14     17
D48V4, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                            2                             18
  CLUS_2                            3                             18
  CLUS_3                            4                             26
  CLUS_4                            2                             14
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED       14      3      2
  DEL PEAK 23(13Q14.2) WILD-TYPE     69     45     44
D48V5, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           14                             69
  CLUS_2                            3                             45
  CLUS_3                            2                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED        7     11      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     67     64     27
D48V6, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                            7                             67
  CLUS_2                           11                             64
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(13Q14.2) MUTATED       11      2      5      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     58     38     30     32
D48V7, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           11                             58
  CLUS_2                            2                             38
  CLUS_3                            5                             30
  CLUS_4                            1                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED       16      2      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     86     40     32
D48V8, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           16                             86
  CLUS_2                            2                             40
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED       12      1      6
  DEL PEAK 23(13Q14.2) WILD-TYPE     57     66     31
D48V9, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           12                             57
  CLUS_2                            1                             66
  CLUS_3                            6                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(13Q14.2) MUTATED       13      5      1
  DEL PEAK 23(13Q14.2) WILD-TYPE     73     42     39
D48V10, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           13                             73
  CLUS_2                            5                             42
  CLUS_3                            1                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 24(14Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED        5     15      0
  DEL PEAK 24(14Q11.2) WILD-TYPE     80     60     24
D49V1, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                            5                             80
  CLUS_2                           15                             60
  CLUS_3                            0                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED        9      1      4
  DEL PEAK 24(14Q11.2) WILD-TYPE     61     41     29
D49V2, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                            9                             61
  CLUS_2                            1                             41
  CLUS_3                            4                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(14Q11.2) MUTATED        5      2      1      2      1
  DEL PEAK 24(14Q11.2) WILD-TYPE     28     19     16     19     12
D49V3, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                            5                             28
  CLUS_2                            2                             19
  CLUS_3                            1                             16
  CLUS_4                            2                             19
  CLUS_5                            1                             12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(14Q11.2) MUTATED        4      2      2      1      2
  DEL PEAK 24(14Q11.2) WILD-TYPE     16     19     28     15     16
D49V4, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                            4                             16
  CLUS_2                            2                             19
  CLUS_3                            2                             28
  CLUS_4                            1                             15
  CLUS_5                            2                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED       14      3      3
  DEL PEAK 24(14Q11.2) WILD-TYPE     69     45     43
D49V5, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                           14                             69
  CLUS_2                            3                             45
  CLUS_3                            3                             43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED        5     13      2
  DEL PEAK 24(14Q11.2) WILD-TYPE     69     62     26
D49V6, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                            5                             69
  CLUS_2                           13                             62
  CLUS_3                            2                             26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(14Q11.2) MUTATED       12      2      3      3
  DEL PEAK 24(14Q11.2) WILD-TYPE     57     38     32     30
D49V7, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                           12                             57
  CLUS_2                            2                             38
  CLUS_3                            3                             32
  CLUS_4                            3                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED       15      2      3
  DEL PEAK 24(14Q11.2) WILD-TYPE     87     40     30
D49V8, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                           15                             87
  CLUS_2                            2                             40
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED       11      6      2
  DEL PEAK 24(14Q11.2) WILD-TYPE     58     61     35
D49V9, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                           11                             58
  CLUS_2                            6                             61
  CLUS_3                            2                             35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(14Q11.2) MUTATED       12      4      3
  DEL PEAK 24(14Q11.2) WILD-TYPE     74     43     37
D49V10, multiclass
        clus
vv       DEL PEAK 24(14Q11.2) MUTATED DEL PEAK 24(14Q11.2) WILD-TYPE
  CLUS_1                           12                             74
  CLUS_2                            4                             43
  CLUS_3                            3                             37
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 25(15Q15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED        3     21     12
  DEL PEAK 25(15Q15.1) WILD-TYPE     82     54     12
D50V1, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                            3                             82
  CLUS_2                           21                             54
  CLUS_3                           12                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       21      3      2
  DEL PEAK 25(15Q15.1) WILD-TYPE     49     39     31
D50V2, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           21                             49
  CLUS_2                            3                             39
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(15Q15.1) MUTATED        8      6      2      2      3
  DEL PEAK 25(15Q15.1) WILD-TYPE     25     15     15     19     10
D50V3, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                            8                             25
  CLUS_2                            6                             15
  CLUS_3                            2                             15
  CLUS_4                            2                             19
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(15Q15.1) MUTATED        4      6      6      3      2
  DEL PEAK 25(15Q15.1) WILD-TYPE     16     15     24     13     16
D50V4, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                            4                             16
  CLUS_2                            6                             15
  CLUS_3                            6                             24
  CLUS_4                            3                             13
  CLUS_5                            2                             16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       23      7      5
  DEL PEAK 25(15Q15.1) WILD-TYPE     60     41     41
D50V5, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           23                             60
  CLUS_2                            7                             41
  CLUS_3                            5                             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       11     23      1
  DEL PEAK 25(15Q15.1) WILD-TYPE     63     52     27
D50V6, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           11                             63
  CLUS_2                           23                             52
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(15Q15.1) MUTATED       18      6      8      3
  DEL PEAK 25(15Q15.1) WILD-TYPE     51     34     27     30
D50V7, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           18                             51
  CLUS_2                            6                             34
  CLUS_3                            8                             27
  CLUS_4                            3                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       27      5      3
  DEL PEAK 25(15Q15.1) WILD-TYPE     75     37     30
D50V8, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           27                             75
  CLUS_2                            5                             37
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       15      8     10
  DEL PEAK 25(15Q15.1) WILD-TYPE     54     59     27
D50V9, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           15                             54
  CLUS_2                            8                             59
  CLUS_3                           10                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       24      7      2
  DEL PEAK 25(15Q15.1) WILD-TYPE     62     40     38
D50V10, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           24                             62
  CLUS_2                            7                             40
  CLUS_3                            2                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 26(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED        6      6      7
  DEL PEAK 26(16Q23.1) WILD-TYPE     79     69     17
D51V1, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            6                             79
  CLUS_2                            6                             69
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED        8      5      1
  DEL PEAK 26(16Q23.1) WILD-TYPE     62     37     32
D51V2, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            8                             62
  CLUS_2                            5                             37
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(16Q23.1) MUTATED        1      0      2      1      0
  DEL PEAK 26(16Q23.1) WILD-TYPE     32     21     15     20     13
D51V3, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            1                             32
  CLUS_2                            0                             21
  CLUS_3                            2                             15
  CLUS_4                            1                             20
  CLUS_5                            0                             13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(16Q23.1) MUTATED        0      0      1      3      0
  DEL PEAK 26(16Q23.1) WILD-TYPE     20     21     29     13     18
D51V4, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            0                             20
  CLUS_2                            0                             21
  CLUS_3                            1                             29
  CLUS_4                            3                             13
  CLUS_5                            0                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED        9      3      6
  DEL PEAK 26(16Q23.1) WILD-TYPE     74     45     40
D51V5, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            9                             74
  CLUS_2                            3                             45
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED        3     12      3
  DEL PEAK 26(16Q23.1) WILD-TYPE     71     63     25
D51V6, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            3                             71
  CLUS_2                           12                             63
  CLUS_3                            3                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(16Q23.1) MUTATED        6      2      4      6
  DEL PEAK 26(16Q23.1) WILD-TYPE     63     38     31     27
D51V7, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            6                             63
  CLUS_2                            2                             38
  CLUS_3                            4                             31
  CLUS_4                            6                             27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED       11      2      5
  DEL PEAK 26(16Q23.1) WILD-TYPE     91     40     28
D51V8, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                           11                             91
  CLUS_2                            2                             40
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED        5      5      7
  DEL PEAK 26(16Q23.1) WILD-TYPE     64     62     30
D51V9, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                            5                             64
  CLUS_2                            5                             62
  CLUS_3                            7                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16Q23.1) MUTATED       11      2      4
  DEL PEAK 26(16Q23.1) WILD-TYPE     75     45     36
D51V10, multiclass
        clus
vv       DEL PEAK 26(16Q23.1) MUTATED DEL PEAK 26(16Q23.1) WILD-TYPE
  CLUS_1                           11                             75
  CLUS_2                            2                             45
  CLUS_3                            4                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 27(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       12     66     11
  DEL PEAK 27(17P12) WILD-TYPE     73      9     13
D52V1, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         12                           73
  CLUS_2                         66                            9
  CLUS_3                         11                           13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       52      6     10
  DEL PEAK 27(17P12) WILD-TYPE     18     36     23
D52V2, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         52                           18
  CLUS_2                          6                           36
  CLUS_3                         10                           23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(17P12) MUTATED       24     13      5      7      6
  DEL PEAK 27(17P12) WILD-TYPE      9      8     12     14      7
D52V3, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         24                            9
  CLUS_2                         13                            8
  CLUS_3                          5                           12
  CLUS_4                          7                           14
  CLUS_5                          6                            7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(17P12) MUTATED       15     14     16      5      5
  DEL PEAK 27(17P12) WILD-TYPE      5      7     14     11     13
D52V4, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         15                            5
  CLUS_2                         14                            7
  CLUS_3                         16                           14
  CLUS_4                          5                           11
  CLUS_5                          5                           13
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       54     24      8
  DEL PEAK 27(17P12) WILD-TYPE     29     24     38
D52V5, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         54                           29
  CLUS_2                         24                           24
  CLUS_3                          8                           38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       40     43      3
  DEL PEAK 27(17P12) WILD-TYPE     34     32     25
D52V6, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         40                           34
  CLUS_2                         43                           32
  CLUS_3                          3                           25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(17P12) MUTATED       50     18     11      7
  DEL PEAK 27(17P12) WILD-TYPE     19     22     24     26
D52V7, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         50                           19
  CLUS_2                         18                           22
  CLUS_3                         11                           24
  CLUS_4                          7                           26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       63     16      7
  DEL PEAK 27(17P12) WILD-TYPE     39     26     26
D52V8, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         63                           39
  CLUS_2                         16                           26
  CLUS_3                          7                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       50     17     18
  DEL PEAK 27(17P12) WILD-TYPE     19     50     19
D52V9, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         50                           19
  CLUS_2                         17                           50
  CLUS_3                         18                           19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(17P12) MUTATED       54     24      7
  DEL PEAK 27(17P12) WILD-TYPE     32     23     33
D52V10, multiclass
        clus
vv       DEL PEAK 27(17P12) MUTATED DEL PEAK 27(17P12) WILD-TYPE
  CLUS_1                         54                           32
  CLUS_2                         24                           23
  CLUS_3                          7                           33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 28(17Q22) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED        4     40      5
  DEL PEAK 28(17Q22) WILD-TYPE     81     35     19
D53V1, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                          4                           81
  CLUS_2                         40                           35
  CLUS_3                          5                           19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       33      3      4
  DEL PEAK 28(17Q22) WILD-TYPE     37     39     29
D53V2, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         33                           37
  CLUS_2                          3                           39
  CLUS_3                          4                           29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(17Q22) MUTATED       18      5      2      1      5
  DEL PEAK 28(17Q22) WILD-TYPE     15     16     15     20      8
D53V3, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         18                           15
  CLUS_2                          5                           16
  CLUS_3                          2                           15
  CLUS_4                          1                           20
  CLUS_5                          5                            8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(17Q22) MUTATED       11      6     12      2      0
  DEL PEAK 28(17Q22) WILD-TYPE      9     15     18     14     18
D53V4, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         11                            9
  CLUS_2                          6                           15
  CLUS_3                         12                           18
  CLUS_4                          2                           14
  CLUS_5                          0                           18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       29     13      5
  DEL PEAK 28(17Q22) WILD-TYPE     54     35     41
D53V5, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         29                           54
  CLUS_2                         13                           35
  CLUS_3                          5                           41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       19     26      2
  DEL PEAK 28(17Q22) WILD-TYPE     55     49     26
D53V6, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         19                           55
  CLUS_2                         26                           49
  CLUS_3                          2                           26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(17Q22) MUTATED       28      8      7      4
  DEL PEAK 28(17Q22) WILD-TYPE     41     32     28     29
D53V7, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         28                           41
  CLUS_2                          8                           32
  CLUS_3                          7                           28
  CLUS_4                          4                           29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       35      7      5
  DEL PEAK 28(17Q22) WILD-TYPE     67     35     28
D53V8, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         35                           67
  CLUS_2                          7                           35
  CLUS_3                          5                           28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       31      7      8
  DEL PEAK 28(17Q22) WILD-TYPE     38     60     29
D53V9, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         31                           38
  CLUS_2                          7                           60
  CLUS_3                          8                           29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17Q22) MUTATED       28     13      5
  DEL PEAK 28(17Q22) WILD-TYPE     58     34     35
D53V10, multiclass
        clus
vv       DEL PEAK 28(17Q22) MUTATED DEL PEAK 28(17Q22) WILD-TYPE
  CLUS_1                         28                           58
  CLUS_2                         13                           34
  CLUS_3                          5                           35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 29(18P11.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       27     23      4
  DEL PEAK 29(18P11.31) WILD-TYPE     58     52     20
D54V1, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            27                              58
  CLUS_2                            23                              52
  CLUS_3                             4                              20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       22     10     14
  DEL PEAK 29(18P11.31) WILD-TYPE     48     32     19
D54V2, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            22                              48
  CLUS_2                            10                              32
  CLUS_3                            14                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(18P11.31) MUTATED        9      9      6      5      3
  DEL PEAK 29(18P11.31) WILD-TYPE     24     12     11     16     10
D54V3, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                             9                              24
  CLUS_2                             9                              12
  CLUS_3                             6                              11
  CLUS_4                             5                              16
  CLUS_5                             3                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(18P11.31) MUTATED        5     10      9      6      2
  DEL PEAK 29(18P11.31) WILD-TYPE     15     11     21     10     16
D54V4, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                             5                              15
  CLUS_2                            10                              11
  CLUS_3                             9                              21
  CLUS_4                             6                              10
  CLUS_5                             2                              16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       24     17     12
  DEL PEAK 29(18P11.31) WILD-TYPE     59     31     34
D54V5, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            24                              59
  CLUS_2                            17                              31
  CLUS_3                            12                              34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       23     22      8
  DEL PEAK 29(18P11.31) WILD-TYPE     51     53     20
D54V6, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            23                              51
  CLUS_2                            22                              53
  CLUS_3                             8                              20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(18P11.31) MUTATED       16     15     14      8
  DEL PEAK 29(18P11.31) WILD-TYPE     53     25     21     25
D54V7, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            16                              53
  CLUS_2                            15                              25
  CLUS_3                            14                              21
  CLUS_4                             8                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       30     14      9
  DEL PEAK 29(18P11.31) WILD-TYPE     72     28     24
D54V8, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            30                              72
  CLUS_2                            14                              28
  CLUS_3                             9                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       18     23     11
  DEL PEAK 29(18P11.31) WILD-TYPE     51     44     26
D54V9, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            18                              51
  CLUS_2                            23                              44
  CLUS_3                            11                              26
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(18P11.31) MUTATED       25     19      8
  DEL PEAK 29(18P11.31) WILD-TYPE     61     28     32
D54V10, multiclass
        clus
vv       DEL PEAK 29(18P11.31) MUTATED DEL PEAK 29(18P11.31) WILD-TYPE
  CLUS_1                            25                              61
  CLUS_2                            19                              28
  CLUS_3                             8                              32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 30(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       41     70     15
  DEL PEAK 30(18Q21.2) WILD-TYPE     44      5      9
D55V1, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           41                             44
  CLUS_2                           70                              5
  CLUS_3                           15                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       60     17     20
  DEL PEAK 30(18Q21.2) WILD-TYPE     10     25     13
D55V2, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           60                             10
  CLUS_2                           17                             25
  CLUS_3                           20                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(18Q21.2) MUTATED       28     16     10      8     11
  DEL PEAK 30(18Q21.2) WILD-TYPE      5      5      7     13      2
D55V3, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           28                              5
  CLUS_2                           16                              5
  CLUS_3                           10                              7
  CLUS_4                            8                             13
  CLUS_5                           11                              2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(18Q21.2) MUTATED       17     17     22     10      7
  DEL PEAK 30(18Q21.2) WILD-TYPE      3      4      8      6     11
D55V4, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           17                              3
  CLUS_2                           17                              4
  CLUS_3                           22                              8
  CLUS_4                           10                              6
  CLUS_5                            7                             11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       67     34     19
  DEL PEAK 30(18Q21.2) WILD-TYPE     16     14     27
D55V5, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           67                             16
  CLUS_2                           34                             14
  CLUS_3                           19                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       51     60      9
  DEL PEAK 30(18Q21.2) WILD-TYPE     23     15     19
D55V6, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           51                             23
  CLUS_2                           60                             15
  CLUS_3                            9                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(18Q21.2) MUTATED       59     26     19     16
  DEL PEAK 30(18Q21.2) WILD-TYPE     10     14     16     17
D55V7, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           59                             10
  CLUS_2                           26                             14
  CLUS_3                           19                             16
  CLUS_4                           16                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       82     25     13
  DEL PEAK 30(18Q21.2) WILD-TYPE     20     17     20
D55V8, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           82                             20
  CLUS_2                           25                             17
  CLUS_3                           13                             20
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       55     37     25
  DEL PEAK 30(18Q21.2) WILD-TYPE     14     30     12
D55V9, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           55                             14
  CLUS_2                           37                             30
  CLUS_3                           25                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q21.2) MUTATED       69     37     11
  DEL PEAK 30(18Q21.2) WILD-TYPE     17     10     29
D55V10, multiclass
        clus
vv       DEL PEAK 30(18Q21.2) MUTATED DEL PEAK 30(18Q21.2) WILD-TYPE
  CLUS_1                           69                             17
  CLUS_2                           37                             10
  CLUS_3                           11                             29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 31(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED        4     25      7
  DEL PEAK 31(19P13.3) WILD-TYPE     81     50     17
D56V1, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                            4                             81
  CLUS_2                           25                             50
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       23      0      2
  DEL PEAK 31(19P13.3) WILD-TYPE     47     42     31
D56V2, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           23                             47
  CLUS_2                            0                             42
  CLUS_3                            2                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(19P13.3) MUTATED        6      4      3      2      5
  DEL PEAK 31(19P13.3) WILD-TYPE     27     17     14     19      8
D56V3, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                            6                             27
  CLUS_2                            4                             17
  CLUS_3                            3                             14
  CLUS_4                            2                             19
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(19P13.3) MUTATED        3      5      8      3      1
  DEL PEAK 31(19P13.3) WILD-TYPE     17     16     22     13     17
D56V4, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                            3                             17
  CLUS_2                            5                             16
  CLUS_3                            8                             22
  CLUS_4                            3                             13
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       23      7      6
  DEL PEAK 31(19P13.3) WILD-TYPE     60     41     40
D56V5, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           23                             60
  CLUS_2                            7                             41
  CLUS_3                            6                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       11     24      1
  DEL PEAK 31(19P13.3) WILD-TYPE     63     51     27
D56V6, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           11                             63
  CLUS_2                           24                             51
  CLUS_3                            1                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(19P13.3) MUTATED       20      6      6      4
  DEL PEAK 31(19P13.3) WILD-TYPE     49     34     29     29
D56V7, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           20                             49
  CLUS_2                            6                             34
  CLUS_3                            6                             29
  CLUS_4                            4                             29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       29      4      3
  DEL PEAK 31(19P13.3) WILD-TYPE     73     38     30
D56V8, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           29                             73
  CLUS_2                            4                             38
  CLUS_3                            3                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       25      4      6
  DEL PEAK 31(19P13.3) WILD-TYPE     44     63     31
D56V9, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           25                             44
  CLUS_2                            4                             63
  CLUS_3                            6                             31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       25      8      2
  DEL PEAK 31(19P13.3) WILD-TYPE     61     39     38
D56V10, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           25                             61
  CLUS_2                            8                             39
  CLUS_3                            2                             38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 32(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED        2     19      7
  DEL PEAK 32(19P13.2) WILD-TYPE     83     56     17
D57V1, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                            2                             83
  CLUS_2                           19                             56
  CLUS_3                            7                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED       19      0      1
  DEL PEAK 32(19P13.2) WILD-TYPE     51     42     32
D57V2, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           19                             51
  CLUS_2                            0                             42
  CLUS_3                            1                             32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(19P13.2) MUTATED        4      4      2      1      5
  DEL PEAK 32(19P13.2) WILD-TYPE     29     17     15     20      8
D57V3, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                            4                             29
  CLUS_2                            4                             17
  CLUS_3                            2                             15
  CLUS_4                            1                             20
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(19P13.2) MUTATED        2      4      7      2      1
  DEL PEAK 32(19P13.2) WILD-TYPE     18     17     23     14     17
D57V4, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                            2                             18
  CLUS_2                            4                             17
  CLUS_3                            7                             23
  CLUS_4                            2                             14
  CLUS_5                            1                             17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED       20      5      2
  DEL PEAK 32(19P13.2) WILD-TYPE     63     43     44
D57V5, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           20                             63
  CLUS_2                            5                             43
  CLUS_3                            2                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED        9     18      0
  DEL PEAK 32(19P13.2) WILD-TYPE     65     57     28
D57V6, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                            9                             65
  CLUS_2                           18                             57
  CLUS_3                            0                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(19P13.2) MUTATED       16      5      5      1
  DEL PEAK 32(19P13.2) WILD-TYPE     53     35     30     32
D57V7, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           16                             53
  CLUS_2                            5                             35
  CLUS_3                            5                             30
  CLUS_4                            1                             32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED       24      3      0
  DEL PEAK 32(19P13.2) WILD-TYPE     78     39     33
D57V8, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           24                             78
  CLUS_2                            3                             39
  CLUS_3                            0                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED       21      1      4
  DEL PEAK 32(19P13.2) WILD-TYPE     48     66     33
D57V9, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           21                             48
  CLUS_2                            1                             66
  CLUS_3                            4                             33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19P13.2) MUTATED       20      6      0
  DEL PEAK 32(19P13.2) WILD-TYPE     66     41     40
D57V10, multiclass
        clus
vv       DEL PEAK 32(19P13.2) MUTATED DEL PEAK 32(19P13.2) WILD-TYPE
  CLUS_1                           20                             66
  CLUS_2                            6                             41
  CLUS_3                            0                             40
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 33(19Q13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED        3     14      5
  DEL PEAK 33(19Q13.33) WILD-TYPE     82     61     19
D58V1, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                             3                              82
  CLUS_2                            14                              61
  CLUS_3                             5                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED       10      1      4
  DEL PEAK 33(19Q13.33) WILD-TYPE     60     41     29
D58V2, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            10                              60
  CLUS_2                             1                              41
  CLUS_3                             4                              29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19Q13.33) MUTATED        3      2      2      2      3
  DEL PEAK 33(19Q13.33) WILD-TYPE     30     19     15     19     10
D58V3, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                             3                              30
  CLUS_2                             2                              19
  CLUS_3                             2                              15
  CLUS_4                             2                              19
  CLUS_5                             3                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(19Q13.33) MUTATED        2      3      4      2      1
  DEL PEAK 33(19Q13.33) WILD-TYPE     18     18     26     14     17
D58V4, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                             2                              18
  CLUS_2                             3                              18
  CLUS_3                             4                              26
  CLUS_4                             2                              14
  CLUS_5                             1                              17
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED       14      4      3
  DEL PEAK 33(19Q13.33) WILD-TYPE     69     44     43
D58V5, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            14                              69
  CLUS_2                             4                              44
  CLUS_3                             3                              43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED        8     12      1
  DEL PEAK 33(19Q13.33) WILD-TYPE     66     63     27
D58V6, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                             8                              66
  CLUS_2                            12                              63
  CLUS_3                             1                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(19Q13.33) MUTATED       11      2      6      2
  DEL PEAK 33(19Q13.33) WILD-TYPE     58     38     29     31
D58V7, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            11                              58
  CLUS_2                             2                              38
  CLUS_3                             6                              29
  CLUS_4                             2                              31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED       17      2      2
  DEL PEAK 33(19Q13.33) WILD-TYPE     85     40     31
D58V8, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            17                              85
  CLUS_2                             2                              40
  CLUS_3                             2                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED       11      7      2
  DEL PEAK 33(19Q13.33) WILD-TYPE     58     60     35
D58V9, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            11                              58
  CLUS_2                             7                              60
  CLUS_3                             2                              35
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(19Q13.33) MUTATED       15      3      2
  DEL PEAK 33(19Q13.33) WILD-TYPE     71     44     38
D58V10, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            15                              71
  CLUS_2                             3                              44
  CLUS_3                             2                              38
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 34(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       12     40     10
  DEL PEAK 34(21Q11.2) WILD-TYPE     73     35     14
D59V1, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           12                             73
  CLUS_2                           40                             35
  CLUS_3                           10                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       35      8      6
  DEL PEAK 34(21Q11.2) WILD-TYPE     35     34     27
D59V2, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           35                             35
  CLUS_2                            8                             34
  CLUS_3                            6                             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(21Q11.2) MUTATED       13      7      7      3      8
  DEL PEAK 34(21Q11.2) WILD-TYPE     20     14     10     18      5
D59V3, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           13                             20
  CLUS_2                            7                             14
  CLUS_3                            7                             10
  CLUS_4                            3                             18
  CLUS_5                            8                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(21Q11.2) MUTATED        6      8     13      8      3
  DEL PEAK 34(21Q11.2) WILD-TYPE     14     13     17      8     15
D59V4, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                            6                             14
  CLUS_2                            8                             13
  CLUS_3                           13                             17
  CLUS_4                            8                              8
  CLUS_5                            3                             15
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       33     18      7
  DEL PEAK 34(21Q11.2) WILD-TYPE     50     30     39
D59V5, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           33                             50
  CLUS_2                           18                             30
  CLUS_3                            7                             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       25     29      4
  DEL PEAK 34(21Q11.2) WILD-TYPE     49     46     24
D59V6, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           25                             49
  CLUS_2                           29                             46
  CLUS_3                            4                             24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(21Q11.2) MUTATED       27     14      9      8
  DEL PEAK 34(21Q11.2) WILD-TYPE     42     26     26     25
D59V7, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           27                             42
  CLUS_2                           14                             26
  CLUS_3                            9                             26
  CLUS_4                            8                             25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       41     12      5
  DEL PEAK 34(21Q11.2) WILD-TYPE     61     30     28
D59V8, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           41                             61
  CLUS_2                           12                             30
  CLUS_3                            5                             28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       33     11     12
  DEL PEAK 34(21Q11.2) WILD-TYPE     36     56     25
D59V9, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           33                             36
  CLUS_2                           11                             56
  CLUS_3                           12                             25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(21Q11.2) MUTATED       31     19      6
  DEL PEAK 34(21Q11.2) WILD-TYPE     55     28     34
D59V10, multiclass
        clus
vv       DEL PEAK 34(21Q11.2) MUTATED DEL PEAK 34(21Q11.2) WILD-TYPE
  CLUS_1                           31                             55
  CLUS_2                           19                             28
  CLUS_3                            6                             34
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 35(22Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED        8     40     12
  DEL PEAK 35(22Q13.31) WILD-TYPE     77     35     12
D60V1, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                             8                              77
  CLUS_2                            40                              35
  CLUS_3                            12                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       34      7      6
  DEL PEAK 35(22Q13.31) WILD-TYPE     36     35     27
D60V2, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            34                              36
  CLUS_2                             7                              35
  CLUS_3                             6                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(22Q13.31) MUTATED       14      5      5      4      5
  DEL PEAK 35(22Q13.31) WILD-TYPE     19     16     12     17      8
D60V3, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            14                              19
  CLUS_2                             5                              16
  CLUS_3                             5                              12
  CLUS_4                             4                              17
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(22Q13.31) MUTATED        7      6     11      5      4
  DEL PEAK 35(22Q13.31) WILD-TYPE     13     15     19     11     14
D60V4, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                             7                              13
  CLUS_2                             6                              15
  CLUS_3                            11                              19
  CLUS_4                             5                              11
  CLUS_5                             4                              14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       32     18      7
  DEL PEAK 35(22Q13.31) WILD-TYPE     51     30     39
D60V5, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            32                              51
  CLUS_2                            18                              30
  CLUS_3                             7                              39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       26     27      4
  DEL PEAK 35(22Q13.31) WILD-TYPE     48     48     24
D60V6, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            26                              48
  CLUS_2                            27                              48
  CLUS_3                             4                              24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(22Q13.31) MUTATED       30     13      8      6
  DEL PEAK 35(22Q13.31) WILD-TYPE     39     27     27     27
D60V7, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            30                              39
  CLUS_2                            13                              27
  CLUS_3                             8                              27
  CLUS_4                             6                              27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       41     11      5
  DEL PEAK 35(22Q13.31) WILD-TYPE     61     31     28
D60V8, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            41                              61
  CLUS_2                            11                              31
  CLUS_3                             5                              28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       29      9     18
  DEL PEAK 35(22Q13.31) WILD-TYPE     40     58     19
D60V9, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            29                              40
  CLUS_2                             9                              58
  CLUS_3                            18                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(22Q13.31) MUTATED       35     17      4
  DEL PEAK 35(22Q13.31) WILD-TYPE     51     30     36
D60V10, multiclass
        clus
vv       DEL PEAK 35(22Q13.31) MUTATED DEL PEAK 35(22Q13.31) WILD-TYPE
  CLUS_1                            35                              51
  CLUS_2                            17                              30
  CLUS_3                             4                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 36(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED        9     40     13
  DEL PEAK 36(22Q13.32) WILD-TYPE     76     35     11
D61V1, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                             9                              76
  CLUS_2                            40                              35
  CLUS_3                            13                              11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       34      9      6
  DEL PEAK 36(22Q13.32) WILD-TYPE     36     33     27
D61V2, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            34                              36
  CLUS_2                             9                              33
  CLUS_3                             6                              27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(22Q13.32) MUTATED       14      6      5      5      5
  DEL PEAK 36(22Q13.32) WILD-TYPE     19     15     12     16      8
D61V3, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            14                              19
  CLUS_2                             6                              15
  CLUS_3                             5                              12
  CLUS_4                             5                              16
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(22Q13.32) MUTATED        7      7     11      6      4
  DEL PEAK 36(22Q13.32) WILD-TYPE     13     14     19     10     14
D61V4, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                             7                              13
  CLUS_2                             7                              14
  CLUS_3                            11                              19
  CLUS_4                             6                              10
  CLUS_5                             4                              14
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       31     18     10
  DEL PEAK 36(22Q13.32) WILD-TYPE     52     30     36
D61V5, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            31                              52
  CLUS_2                            18                              30
  CLUS_3                            10                              36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       27     27      5
  DEL PEAK 36(22Q13.32) WILD-TYPE     47     48     23
D61V6, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            27                              47
  CLUS_2                            27                              48
  CLUS_3                             5                              23
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(22Q13.32) MUTATED       29     14      8      8
  DEL PEAK 36(22Q13.32) WILD-TYPE     40     26     27     25
D61V7, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            29                              40
  CLUS_2                            14                              26
  CLUS_3                             8                              27
  CLUS_4                             8                              25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       39     12      8
  DEL PEAK 36(22Q13.32) WILD-TYPE     63     30     25
D61V8, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            39                              63
  CLUS_2                            12                              30
  CLUS_3                             8                              25
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       29     11     18
  DEL PEAK 36(22Q13.32) WILD-TYPE     40     56     19
D61V9, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            29                              40
  CLUS_2                            11                              56
  CLUS_3                            18                              19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(22Q13.32) MUTATED       33     18      7
  DEL PEAK 36(22Q13.32) WILD-TYPE     53     29     33
D61V10, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            33                              53
  CLUS_2                            18                              29
  CLUS_3                             7                              33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 37(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED        3     18      8
  DEL PEAK 37(XP21.1) WILD-TYPE     82     57     16
D62V1, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                           3                            82
  CLUS_2                          18                            57
  CLUS_3                           8                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED       16      5      2
  DEL PEAK 37(XP21.1) WILD-TYPE     54     37     31
D62V2, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          16                            54
  CLUS_2                           5                            37
  CLUS_3                           2                            31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(XP21.1) MUTATED        6      1      2      2      3
  DEL PEAK 37(XP21.1) WILD-TYPE     27     20     15     19     10
D62V3, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                           6                            27
  CLUS_2                           1                            20
  CLUS_3                           2                            15
  CLUS_4                           2                            19
  CLUS_5                           3                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(XP21.1) MUTATED        3      1      5      3      2
  DEL PEAK 37(XP21.1) WILD-TYPE     17     20     25     13     16
D62V4, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                           3                            17
  CLUS_2                           1                            20
  CLUS_3                           5                            25
  CLUS_4                           3                            13
  CLUS_5                           2                            16
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED       16      8      4
  DEL PEAK 37(XP21.1) WILD-TYPE     67     40     42
D62V5, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          16                            67
  CLUS_2                           8                            40
  CLUS_3                           4                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED        9     15      4
  DEL PEAK 37(XP21.1) WILD-TYPE     65     60     24
D62V6, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                           9                            65
  CLUS_2                          15                            60
  CLUS_3                           4                            24
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(XP21.1) MUTATED       17      6      2      3
  DEL PEAK 37(XP21.1) WILD-TYPE     52     34     33     30
D62V7, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          17                            52
  CLUS_2                           6                            34
  CLUS_3                           2                            33
  CLUS_4                           3                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED       18      6      4
  DEL PEAK 37(XP21.1) WILD-TYPE     84     36     29
D62V8, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          18                            84
  CLUS_2                           6                            36
  CLUS_3                           4                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED       15      4      8
  DEL PEAK 37(XP21.1) WILD-TYPE     54     63     29
D62V9, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          15                            54
  CLUS_2                           4                            63
  CLUS_3                           8                            29
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(XP21.1) MUTATED       16      7      4
  DEL PEAK 37(XP21.1) WILD-TYPE     70     40     36
D62V10, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          16                            70
  CLUS_2                           7                            40
  CLUS_3                           4                            36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 38(XQ11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED        0     16      7
  DEL PEAK 38(XQ11.2) WILD-TYPE     85     59     17
D63V1, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                           0                            85
  CLUS_2                          16                            59
  CLUS_3                           7                            17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED       15      3      0
  DEL PEAK 38(XQ11.2) WILD-TYPE     55     39     33
D63V2, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          15                            55
  CLUS_2                           3                            39
  CLUS_3                           0                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(XQ11.2) MUTATED        7      1      1      1      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     26     20     16     20     12
D63V3, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                           7                            26
  CLUS_2                           1                            20
  CLUS_3                           1                            16
  CLUS_4                           1                            20
  CLUS_5                           1                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(XQ11.2) MUTATED        3      1      5      2      0
  DEL PEAK 38(XQ11.2) WILD-TYPE     17     20     25     14     18
D63V4, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                           3                            17
  CLUS_2                           1                            20
  CLUS_3                           5                            25
  CLUS_4                           2                            14
  CLUS_5                           0                            18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED       16      4      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     67     44     45
D63V5, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          16                            67
  CLUS_2                           4                            44
  CLUS_3                           1                            45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED        5     15      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     69     60     27
D63V6, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                           5                            69
  CLUS_2                          15                            60
  CLUS_3                           1                            27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(XQ11.2) MUTATED       16      2      2      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     53     38     33     32
D63V7, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          16                            53
  CLUS_2                           2                            38
  CLUS_3                           2                            33
  CLUS_4                           1                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED       18      2      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     84     40     32
D63V8, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          18                            84
  CLUS_2                           2                            40
  CLUS_3                           1                            32
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED       14      2      4
  DEL PEAK 38(XQ11.2) WILD-TYPE     55     65     33
D63V9, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          14                            55
  CLUS_2                           2                            65
  CLUS_3                           4                            33
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(XQ11.2) MUTATED       16      3      1
  DEL PEAK 38(XQ11.2) WILD-TYPE     70     44     39
D63V10, multiclass
        clus
vv       DEL PEAK 38(XQ11.2) MUTATED DEL PEAK 38(XQ11.2) WILD-TYPE
  CLUS_1                          16                            70
  CLUS_2                           3                            44
  CLUS_3                           1                            39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
