
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/SARC-TP/11493923/SARC-TP.meth.by_max_stddev.data.txt", "-u13904", "-oSARC-TP")
Cluster size 13904 broken into 7735 6169 
Cluster size 7735 broken into 4243 3492 
Cluster size 4243 broken into 1645 2598 
Cluster size 1645 broken into 1110 535 
Done cluster 1110 
Done cluster 535 
Done cluster 1645 
Cluster size 2598 broken into 1310 1288 
Done cluster 1310 
Done cluster 1288 
Done cluster 2598 
Done cluster 4243 
Cluster size 3492 broken into 1378 2114 
Done cluster 1378 
Cluster size 2114 broken into 926 1188 
Done cluster 926 
Done cluster 1188 
Done cluster 2114 
Done cluster 3492 
Done cluster 7735 
Cluster size 6169 broken into 2929 3240 
Cluster size 2929 broken into 1924 1005 
Cluster size 1924 broken into 882 1042 
Done cluster 882 
Done cluster 1042 
Done cluster 1924 
Done cluster 1005 
Done cluster 2929 
Cluster size 3240 broken into 2202 1038 
Cluster size 2202 broken into 1100 1102 
Done cluster 1100 
Done cluster 1102 
Done cluster 2202 
Done cluster 1038 
Done cluster 3240 
Done cluster 6169 
> q(save="no")
