name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-D3-A1Q1-06A-21D-A196-08	103	103	0	90	0	coding only	1	28836781	...	12	81	95	4.161352e-07	2.808913e-06	3.294404e-06	-5.482223e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A1Q3-06A-11D-A196-08	155	153	2	135	1.290323e-02	coding only	1	28836781	...	16	125	147	5.548470e-07	4.334742e-06	5.097656e-06	-5.292629e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A1Q4-06A-11D-A196-08	325	319	6	213	1.846154e-02	coding only	1	28836781	...	106	202	314	3.675861e-06	7.004943e-06	1.088887e-05	-4.963017e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A1Q5-06A-11D-A196-08	442	431	11	297	2.488688e-02	coding only	1	28836781	...	132	286	423	4.577487e-06	9.917889e-06	1.466877e-05	-4.833606e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A1Q6-06A-11D-A196-08	1071	1059	12	690	1.120448e-02	coding only	1	28836781	...	355	661	1022	1.231067e-05	2.292211e-05	3.544085e-05	-4.450496e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A1Q7-06A-11D-A19A-08	126	125	1	79	7.936508e-03	coding only	1	28836781	...	46	71	119	1.595185e-06	2.462133e-06	4.126674e-06	-5.384400e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A1Q8-06A-11D-A19A-08	294	287	7	193	2.380952e-02	coding only	1	28836781	...	93	184	278	3.225048e-06	6.380740e-06	9.640466e-06	-5.015902e+00	...	1	28780584	...	3.474565e-08
TCGA-D3-A1Q9-06A-11D-A19A-08	39	38	1	32	2.564103e-02	coding only	1	28836781	...	6	31	38	2.080676e-07	1.075016e-06	1.317762e-06	-5.880163e+00	...	1	28780584	...	3.474565e-08
TCGA-D3-A1QA-06A-11D-A196-08	653	643	10	452	1.531394e-02	coding only	1	28836781	...	189	431	625	6.554130e-06	1.494619e-05	2.167371e-05	-4.664067e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A1QB-06A-11D-A19A-08	447	442	5	298	1.118568e-02	coding only	1	28836781	...	138	283	423	4.785555e-06	9.813855e-06	1.466877e-05	-4.833606e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A2J6-06A-11D-A19A-08	107	104	3	93	2.803738e-02	coding only	1	28836781	...	11	89	103	3.814573e-07	3.086336e-06	3.571827e-06	-5.447110e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A2J7-06A-11D-A196-08	423	413	10	296	2.364066e-02	coding only	1	28836781	...	114	280	399	3.953285e-06	9.709822e-06	1.383650e-05	-4.858974e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A2J8-06A-11D-A196-08	776	769	7	506	9.020619e-03	coding only	1	28836781	...	253	487	745	8.773517e-06	1.688815e-05	2.583506e-05	-4.587791e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A2J9-06A-11D-A196-08	101	101	0	59	0	coding only	1	28836781	...	41	53	94	1.421795e-06	1.837931e-06	3.259726e-06	-5.486819e+00	...	0	28780584	...	0
TCGA-D3-A2JA-06A-11D-A196-08	434	426	8	296	1.843318e-02	coding only	1	28836781	...	126	278	409	4.369420e-06	9.640466e-06	1.418328e-05	-4.848223e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A2JB-06A-11D-A196-08	51	49	2	46	3.921569e-02	coding only	1	28836781	...	3	43	46	1.040338e-07	1.491151e-06	1.595185e-06	-5.797189e+00	...	0	28780584	...	0
TCGA-D3-A2JC-06A-11D-A19A-08	293	289	4	211	1.365188e-02	coding only	1	28836781	...	76	203	282	2.635523e-06	7.039621e-06	9.779178e-06	-5.009698e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A2JD-06A-11D-A19A-08	494	490	4	324	8.097166e-03	coding only	1	28836781	...	163	313	479	5.652503e-06	1.085419e-05	1.661073e-05	-4.779611e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A2JF-06A-11D-A196-08	1765	1738	27	1200	1.529745e-02	coding only	1	28836781	...	520	1157	1681	1.803253e-05	4.012237e-05	5.829361e-05	-4.234379e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A2JG-06A-11D-A196-08	148	145	3	99	2.027027e-02	coding only	1	28836781	...	44	88	138	1.525829e-06	3.051658e-06	4.785555e-06	-5.320068e+00	...	6	28780584	...	2.084739e-07
TCGA-D3-A2JH-06A-11D-A196-08	784	774	10	520	1.275510e-02	coding only	1	28836781	...	247	501	752	8.565450e-06	1.737365e-05	2.607781e-05	-4.583729e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A2JK-06A-11D-A196-08	365	361	4	248	1.095890e-02	coding only	1	28836781	...	112	237	350	3.883929e-06	8.218670e-06	1.213728e-05	-4.915879e+00	...	1	28780584	...	3.474565e-08
TCGA-D3-A2JL-06A-11D-A196-08	397	395	2	273	5.037783e-03	coding only	1	28836781	...	114	255	375	3.953285e-06	8.842873e-06	1.300423e-05	-4.885916e+00	...	6	28780584	...	2.084739e-07
TCGA-D3-A2JN-06A-11D-A196-08	397	392	5	275	1.259446e-02	coding only	1	28836781	...	112	256	378	3.883929e-06	8.877551e-06	1.310826e-05	-4.882455e+00	...	10	28780584	...	3.474565e-07
TCGA-D3-A2JO-06A-11D-A196-08	788	770	18	531	2.284264e-02	coding only	1	28836781	...	234	507	750	8.114637e-06	1.758171e-05	2.600845e-05	-4.584886e+00	...	7	28780584	...	2.432195e-07
TCGA-D3-A2JP-06A-11D-A19A-08	325	322	3	233	9.230769e-03	coding only	1	28836781	...	83	220	306	2.878269e-06	7.629146e-06	1.061145e-05	-4.974225e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3BZ-06A-12D-A196-08	85	84	1	70	1.176471e-02	coding only	1	28836781	...	13	63	79	4.508131e-07	2.184710e-06	2.739557e-06	-5.562320e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3C1-06A-12D-A196-08	186	184	2	131	1.075269e-02	coding only	1	28836781	...	51	126	181	1.768575e-06	4.369420e-06	6.276706e-06	-5.202268e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A3C3-06A-12D-A19A-08	316	307	9	217	2.848101e-02	coding only	1	28836781	...	87	205	294	3.016980e-06	7.108977e-06	1.019531e-05	-4.991599e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A3C6-06A-12D-A196-08	170	168	2	115	1.176471e-02	coding only	1	28836781	...	48	108	160	1.664541e-06	3.745217e-06	5.548470e-06	-5.255827e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3C7-06A-11D-A196-08	1155	1145	10	802	8.658009e-03	coding only	1	28836781	...	331	780	1117	1.147840e-05	2.704879e-05	3.873525e-05	-4.411894e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A3C8-06A-12D-A19A-08	843	837	6	571	7.117438e-03	coding only	1	28836781	...	259	549	813	8.981585e-06	1.903819e-05	2.819316e-05	-4.549856e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A3CB-06A-11D-A196-08	329	324	5	214	1.519757e-02	coding only	1	28836781	...	104	205	312	3.606505e-06	7.108977e-06	1.081952e-05	-4.965792e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3CC-06A-11D-A19A-08	43	40	3	33	6.976744e-02	coding only	1	28836781	...	7	29	39	2.427455e-07	1.005660e-06	1.352439e-06	-5.868882e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3CE-06A-11D-A19A-08	101	101	0	89	0	coding only	1	28836781	...	11	75	93	3.814573e-07	2.600845e-06	3.225048e-06	-5.491464e+00	...	7	28780584	...	2.432195e-07
TCGA-D3-A3CF-06A-11D-A196-08	41	41	0	34	0	coding only	1	28836781	...	6	33	39	2.080676e-07	1.144372e-06	1.352439e-06	-5.868882e+00	...	0	28780584	...	0
TCGA-D3-A3ML-06A-11D-A21A-08	1132	1116	16	749	1.413428e-02	coding only	1	28836781	...	358	718	1082	1.241470e-05	2.489876e-05	3.752153e-05	-4.425720e+00	...	6	28780584	...	2.084739e-07
TCGA-D3-A3MO-06A-11D-A21A-08	86	86	0	62	0	coding only	1	28836781	...	22	58	84	7.629146e-07	2.011320e-06	2.912946e-06	-5.535667e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A3MR-06A-11D-A21A-08	1075	1059	16	719	1.488372e-02	coding only	1	28836781	...	328	685	1022	1.137436e-05	2.375439e-05	3.544085e-05	-4.450496e+00	...	9	28780584	...	3.127108e-07
TCGA-D3-A3MU-06A-11D-A21A-08	587	578	9	407	1.533220e-02	coding only	1	28836781	...	165	385	554	5.721859e-06	1.335100e-05	1.921158e-05	-4.716437e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A3MV-06A-11D-A21A-08	657	648	9	407	1.369863e-02	coding only	1	28836781	...	229	389	625	7.941247e-06	1.348972e-05	2.167371e-05	-4.664067e+00	...	7	28780584	...	2.432195e-07
TCGA-D3-A51E-06A-11D-A25O-08	341	338	3	235	8.797654e-03	coding only	1	28836781	...	101	222	328	3.502471e-06	7.698501e-06	1.137436e-05	-4.944073e+00	...	5	28780584	...	1.737282e-07
TCGA-D3-A51F-06A-11D-A25O-08	145	143	2	97	1.379310e-02	coding only	1	28836781	...	44	92	136	1.525829e-06	3.190370e-06	4.716199e-06	-5.326408e+00	...	0	28780584	...	0
TCGA-D3-A51G-06A-11D-A25O-08	1518	1495	23	986	1.515152e-02	coding only	1	28836781	...	493	946	1449	1.709622e-05	3.280533e-05	5.024833e-05	-4.298878e+00	...	9	28780584	...	3.127108e-07
TCGA-D3-A51H-06A-12D-A25O-08	75	74	1	48	1.333333e-02	coding only	1	28836781	...	25	45	73	8.669484e-07	1.560507e-06	2.531489e-06	-5.596624e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A51J-06A-11D-A25O-08	554	545	9	382	1.624549e-02	coding only	1	28836781	...	155	368	525	5.375080e-06	1.276148e-05	1.820592e-05	-4.739787e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A51K-06A-11D-A25O-08	30	30	0	25	0	coding only	1	28836781	...	3	23	28	1.040338e-07	7.975925e-07	9.709822e-07	-6.012789e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A51N-06A-11D-A25O-08	122	120	2	90	1.639344e-02	coding only	1	28836781	...	28	85	116	9.709822e-07	2.947624e-06	4.022640e-06	-5.395489e+00	...	2	28780584	...	6.949129e-08
TCGA-D3-A51R-06A-11D-A25O-08	887	872	15	576	1.691094e-02	coding only	1	28836781	...	288	551	844	9.987245e-06	1.910754e-05	2.926818e-05	-4.533604e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A51T-06A-11D-A25O-08	1454	1427	27	955	1.856946e-02	coding only	1	28836781	...	454	913	1374	1.574378e-05	3.166095e-05	4.764748e-05	-4.321960e+00	...	6	28780584	...	2.084739e-07
TCGA-D3-A5GN-06A-11D-A27K-08	606	597	9	397	1.485149e-02	coding only	1	28836781	...	191	377	573	6.623485e-06	1.307358e-05	1.987046e-05	-4.701792e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A5GO-06A-12D-A27K-08	1970	1932	38	1280	1.928934e-02	coding only	1	28836781	...	631	1225	1867	2.188178e-05	4.248047e-05	6.474370e-05	-4.188802e+00	...	6	28780584	...	2.084739e-07
TCGA-D3-A5GR-06A-11D-A27K-08	337	334	3	220	8.902077e-03	coding only	1	28836781	...	109	204	316	3.779895e-06	7.074299e-06	1.095823e-05	-4.960260e+00	...	3	28780584	...	1.042369e-07
TCGA-D3-A5GS-06A-11D-A27K-08	488	482	6	322	1.229508e-02	coding only	1	28836781	...	158	308	470	5.479114e-06	1.068080e-05	1.629863e-05	-4.787849e+00	...	4	28780584	...	1.389826e-07
TCGA-D3-A5GU-06A-11D-A27K-08	875	861	14	609	1.600000e-02	coding only	1	28836781	...	248	577	834	8.600128e-06	2.000917e-05	2.892140e-05	-4.538781e+00	...	8	28780584	...	2.779652e-07
TCGA-D9-A148-06A-11D-A19A-08	356	350	6	238	1.685393e-02	coding only	1	28836781	...	108	220	334	3.745217e-06	7.629146e-06	1.158243e-05	-4.936200e+00	...	5	28780584	...	1.737282e-07
TCGA-D9-A149-06A-11D-A196-08	299	296	3	216	1.003344e-02	coding only	1	28836781	...	74	210	288	2.566167e-06	7.282366e-06	9.987245e-06	-5.000554e+00	...	3	28780584	...	1.042369e-07
TCGA-D9-A1JW-06A-11D-A19A-08	1107	1091	16	729	1.445348e-02	coding only	1	28836781	...	347	706	1062	1.203324e-05	2.448262e-05	3.682797e-05	-4.433822e+00	...	8	28780584	...	2.779652e-07
TCGA-D9-A1JX-06A-11D-A19A-08	228	223	5	157	2.192982e-02	coding only	1	28836781	...	61	150	216	2.115354e-06	5.201690e-06	7.490434e-06	-5.125493e+00	...	3	28780584	...	1.042369e-07
TCGA-D9-A3Z1-06A-11D-A23B-08	629	618	11	405	1.748808e-02	coding only	1	28836781	...	207	391	603	7.178332e-06	1.355907e-05	2.091079e-05	-4.679629e+00	...	5	28780584	...	1.737282e-07
TCGA-D9-A3Z3-06A-11D-A23B-08	170	165	5	113	2.941176e-02	coding only	1	28836781	...	50	109	160	1.733897e-06	3.779895e-06	5.548470e-06	-5.255827e+00	...	1	28780584	...	3.474565e-08
TCGA-D9-A6E9-06A-12D-A30X-08	229	227	2	171	8.733624e-03	coding only	1	28836781	...	55	157	216	1.907286e-06	5.444436e-06	7.490434e-06	-5.125493e+00	...	4	28780584	...	1.389826e-07
TCGA-D9-A6EA-06A-11D-A30X-08	823	816	7	548	8.505468e-03	coding only	1	28836781	...	257	528	790	8.912229e-06	1.830995e-05	2.739557e-05	-4.562320e+00	...	5	28780584	...	1.737282e-07
TCGA-D9-A6EC-06A-11D-A30X-08	5478	5404	74	3861	1.350858e-02	coding only	1	28836781	...	1473	3705	5196	5.108060e-05	1.284817e-04	1.801865e-04	-3.744278e+00	...	11	28780584	...	3.822021e-07
TCGA-DA-A1HV-06A-21D-A196-08	1695	1668	27	1112	1.592920e-02	coding only	1	28836781	...	540	1065	1614	1.872608e-05	3.693200e-05	5.597019e-05	-4.252043e+00	...	4	28780584	...	1.389826e-07
TCGA-DA-A1HW-06A-11D-A19A-08	407	399	8	261	1.965602e-02	coding only	1	28836781	...	132	243	383	4.577487e-06	8.426738e-06	1.328165e-05	-4.876748e+00	...	6	28780584	...	2.084739e-07
TCGA-DA-A1HY-06A-11D-A19A-08	900	889	11	609	1.222222e-02	coding only	1	28836781	...	270	587	863	9.363042e-06	2.035595e-05	2.992706e-05	-4.523936e+00	...	5	28780584	...	1.737282e-07
TCGA-DA-A1I0-06A-11D-A20D-08	626	614	12	419	1.916933e-02	coding only	1	28836781	...	189	397	596	6.554130e-06	1.376714e-05	2.066805e-05	-4.684701e+00	...	8	28780584	...	2.779652e-07
TCGA-DA-A1I1-06A-12D-A196-08	475	468	7	332	1.473684e-02	coding only	1	28836781	...	132	322	458	4.577487e-06	1.116629e-05	1.588249e-05	-4.799081e+00	...	3	28780584	...	1.042369e-07
TCGA-DA-A1I2-06A-21D-A19A-08	164	159	5	108	3.048780e-02	exome+100bp flanks	2	35868282	...	50	98	150	1.393989e-06	2.732219e-06	4.181968e-06	-5.378619e+00	...	2	32148004	...	6.221226e-08
TCGA-DA-A1I4-06A-11D-A196-08	307	303	4	217	1.302932e-02	coding only	1	28836781	...	83	206	292	2.878269e-06	7.143654e-06	1.012596e-05	-4.994564e+00	...	3	28780584	...	1.042369e-07
TCGA-DA-A1I5-06A-11D-A197-08	538	536	2	365	3.717472e-03	coding only	1	28836781	...	167	345	519	5.791215e-06	1.196389e-05	1.799785e-05	-4.744779e+00	...	7	28780584	...	2.432195e-07
TCGA-DA-A1I7-06A-22D-A197-08	573	564	9	370	1.570681e-02	coding only	1	28836781	...	185	353	544	6.415418e-06	1.224131e-05	1.886480e-05	-4.724348e+00	...	6	28780584	...	2.084739e-07
TCGA-DA-A1I8-06A-11D-A197-08	231	227	4	142	1.731602e-02	coding only	1	28836781	...	83	133	218	2.878269e-06	4.612165e-06	7.559790e-06	-5.121490e+00	...	2	28780584	...	6.949129e-08
TCGA-DA-A1IA-06A-11D-A196-08	409	406	3	261	7.334963e-03	coding only	1	28836781	...	140	247	392	4.854911e-06	8.565450e-06	1.359375e-05	-4.866661e+00	...	5	28780584	...	1.737282e-07
TCGA-DA-A1IB-06A-11D-A196-08	20	19	1	17	5.000000e-02	coding only	1	28836781	...	2	13	19	6.935587e-08	4.508131e-07	6.588808e-07	-6.181193e+00	...	4	28780584	...	1.389826e-07
TCGA-DA-A1IC-06A-11D-A197-08	1184	1165	19	776	1.604730e-02	coding only	1	28836781	...	376	739	1123	1.303890e-05	2.562699e-05	3.894332e-05	-4.409567e+00	...	7	28780584	...	2.432195e-07
TCGA-DA-A3F2-06A-11D-A20D-08	8	8	0	5	0	coding only	1	28836781	...	3	4	8	1.040338e-07	1.387117e-07	2.774235e-07	-6.556857e+00	...	1	28780584	...	3.474565e-08
TCGA-DA-A3F3-06A-11D-A20D-08	375	367	8	262	2.133333e-02	coding only	1	28836781	...	99	245	350	3.433116e-06	8.496094e-06	1.213728e-05	-4.915879e+00	...	5	28780584	...	1.737282e-07
TCGA-DA-A3F5-06A-11D-A20D-08	425	419	6	291	1.411765e-02	coding only	1	28836781	...	124	278	407	4.300064e-06	9.640466e-06	1.411392e-05	-4.850352e+00	...	5	28780584	...	1.737282e-07
TCGA-DA-A3F8-06A-11D-A20D-08	1463	1449	14	958	9.569378e-03	coding only	1	28836781	...	475	919	1401	1.647202e-05	3.186902e-05	4.858379e-05	-4.313509e+00	...	6	28780584	...	2.084739e-07
TCGA-EB-A44Q-06A-11D-A25O-08	63	63	0	49	0	coding only	1	28836781	...	14	45	62	4.854911e-07	1.560507e-06	2.150032e-06	-5.667555e+00	...	3	28780584	...	1.042369e-07
TCGA-EB-A44R-06A-41D-A25O-08	76	75	1	53	1.315789e-02	coding only	1	28836781	...	22	49	73	7.629146e-07	1.699219e-06	2.531489e-06	-5.596624e+00	...	2	28780584	...	6.949129e-08
TCGA-EB-A5SG-06A-11D-A30X-08	366	364	2	242	5.464481e-03	coding only	1	28836781	...	115	228	346	3.987962e-06	7.906569e-06	1.199857e-05	-4.920871e+00	...	2	28780584	...	6.949129e-08
TCGA-EB-A5SH-06A-11D-A30X-08	118	118	0	93	0	coding only	1	28836781	...	23	84	112	7.975925e-07	2.912946e-06	3.883929e-06	-5.410729e+00	...	5	28780584	...	1.737282e-07
TCGA-EB-A5UL-06A-11D-A30X-08	584	580	4	403	6.849315e-03	coding only	1	28836781	...	170	379	551	5.895249e-06	1.314294e-05	1.910754e-05	-4.718795e+00	...	2	28780584	...	6.949129e-08
TCGA-EB-A5UN-06A-11D-A30X-08	889	875	14	607	1.574803e-02	coding only	1	28836781	...	257	577	843	8.912229e-06	2.000917e-05	2.923350e-05	-4.534119e+00	...	9	28780584	...	3.127108e-07
TCGA-EE-A17X-06A-11D-A197-08	983	964	19	660	1.932859e-02	coding only	1	28836781	...	297	636	938	1.029935e-05	2.205517e-05	3.252790e-05	-4.487744e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A17Y-06A-11D-A196-08	204	203	1	138	4.901961e-03	coding only	1	28836781	...	64	129	196	2.219388e-06	4.473454e-06	6.796875e-06	-5.167691e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A17Z-06A-11D-A196-08	34	33	1	29	2.941176e-02	coding only	1	28836781	...	4	25	34	1.387117e-07	8.669484e-07	1.179050e-06	-5.928468e+00	...	4	28780584	...	1.389826e-07
TCGA-EE-A180-06A-11D-A21A-08	642	630	12	439	1.869159e-02	coding only	1	28836781	...	186	410	608	6.450096e-06	1.421795e-05	2.108418e-05	-4.676043e+00	...	11	28780584	...	3.822021e-07
TCGA-EE-A181-06A-11D-A196-08	3696	3661	35	2453	9.469697e-03	coding only	1	28836781	...	1167	2383	3564	4.046915e-05	8.263752e-05	1.235922e-04	-3.908009e+00	...	12	28780584	...	4.169478e-07
TCGA-EE-A182-06A-11D-A196-08	1841	1809	32	1186	1.738186e-02	coding only	1	28836781	...	608	1119	1740	2.108418e-05	3.880461e-05	6.033961e-05	-4.219398e+00	...	10	28780584	...	3.474565e-07
TCGA-EE-A183-06A-11D-A196-08	945	938	7	651	7.407407e-03	coding only	1	28836781	...	273	624	904	9.467076e-06	2.163903e-05	3.134885e-05	-4.503778e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A184-06A-11D-A196-08	395	392	3	289	7.594937e-03	coding only	1	28836781	...	100	281	385	3.467793e-06	9.744500e-06	1.335100e-05	-4.874486e+00	...	4	28780584	...	1.389826e-07
TCGA-EE-A185-06A-11D-A196-08	242	237	5	160	2.066116e-02	coding only	1	28836781	...	75	149	227	2.600845e-06	5.167012e-06	7.871891e-06	-5.103921e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A20B-06A-11D-A196-08	227	220	7	155	3.083700e-02	exome+100bp flanks	2	35868282	...	64	149	216	1.784306e-06	4.154088e-06	6.022034e-06	-5.220257e+00	...	3	32148004	...	9.331839e-08
TCGA-EE-A20C-06A-11D-A196-08	2495	2466	29	1669	1.162325e-02	coding only	1	28836781	...	779	1591	2393	2.701411e-05	5.517259e-05	8.298430e-05	-4.081004e+00	...	18	28780584	...	6.254216e-07
TCGA-EE-A20F-06A-21D-A196-08	618	608	10	404	1.618123e-02	coding only	1	28836781	...	199	382	589	6.900909e-06	1.324697e-05	2.042530e-05	-4.689831e+00	...	8	28780584	...	2.779652e-07
TCGA-EE-A20H-06A-11D-A197-08	740	727	13	511	1.756757e-02	coding only	1	28836781	...	210	483	698	7.282366e-06	1.674944e-05	2.420520e-05	-4.616091e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A20I-06A-11D-A196-08	30	28	2	20	6.666667e-02	coding only	1	28836781	...	8	16	26	2.774235e-07	5.548470e-07	9.016263e-07	-6.044973e+00	...	2	28780584	...	6.949129e-08
TCGA-EE-A29A-06A-12D-A196-08	309	305	4	210	1.294498e-02	coding only	1	28836781	...	87	198	291	3.016980e-06	6.866231e-06	1.009128e-05	-4.996054e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A29B-06A-11D-A197-08	678	673	5	469	7.374631e-03	coding only	1	28836781	...	196	461	660	6.796875e-06	1.598653e-05	2.288744e-05	-4.640403e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A29C-06A-21D-A197-08	501	498	3	340	5.988024e-03	coding only	1	28836781	...	153	331	487	5.305724e-06	1.147840e-05	1.688815e-05	-4.772418e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A29D-06A-11D-A197-08	4710	4630	80	3035	1.698514e-02	coding only	1	28836781	...	1539	2913	4476	5.336934e-05	1.010168e-04	1.552184e-04	-3.809057e+00	...	18	28780584	...	6.254216e-07
TCGA-EE-A29E-06A-11D-A197-08	4413	4347	66	2877	1.495581e-02	coding only	1	28836781	...	1428	2770	4210	4.952009e-05	9.605788e-05	1.459941e-04	-3.835665e+00	...	8	28780584	...	2.779652e-07
TCGA-EE-A29G-06A-12D-A196-08	499	494	5	339	1.002004e-02	coding only	1	28836781	...	150	318	474	5.201690e-06	1.102758e-05	1.643734e-05	-4.784168e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A29H-06A-12D-A197-08	393	385	8	260	2.035623e-02	coding only	1	28836781	...	123	246	375	4.265386e-06	8.530772e-06	1.300423e-05	-4.885916e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A29L-06A-12D-A196-08	2500	2464	36	1649	1.440000e-02	coding only	1	28836781	...	791	1582	2385	2.743025e-05	5.486049e-05	8.270687e-05	-4.082458e+00	...	11	28780584	...	3.822021e-07
TCGA-EE-A29M-06A-11D-A196-08	2875	2835	40	1924	1.391304e-02	coding only	1	28836781	...	883	1836	2735	3.062062e-05	6.366869e-05	9.484415e-05	-4.022989e+00	...	13	28780584	...	4.516934e-07
TCGA-EE-A29N-06A-12D-A197-08	766	756	10	511	1.305483e-02	coding only	1	28836781	...	235	474	722	8.149315e-06	1.643734e-05	2.503747e-05	-4.601410e+00	...	12	28780584	...	4.169478e-07
TCGA-EE-A29P-06A-11D-A197-08	381	379	2	255	5.249344e-03	coding only	1	28836781	...	119	232	358	4.126674e-06	8.045281e-06	1.241470e-05	-4.906064e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A29Q-06A-11D-A197-08	379	377	2	251	5.277045e-03	coding only	1	28836781	...	122	242	367	4.230708e-06	8.392060e-06	1.272680e-05	-4.895281e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A29R-06A-11D-A197-08	846	836	10	541	1.182033e-02	coding only	1	28836781	...	287	523	813	9.952567e-06	1.813656e-05	2.819316e-05	-4.549856e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A29S-06A-11D-A197-08	1310	1293	17	862	1.297710e-02	coding only	1	28836781	...	414	827	1251	1.435666e-05	2.867865e-05	4.338210e-05	-4.362689e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A29V-06A-12D-A197-08	1241	1227	14	818	1.128122e-02	coding only	1	28836781	...	400	791	1200	1.387117e-05	2.743025e-05	4.161352e-05	-4.380766e+00	...	8	28780584	...	2.779652e-07
TCGA-EE-A29W-06A-11D-A196-08	93	93	0	67	0	coding only	1	28836781	...	25	64	92	8.669484e-07	2.219388e-06	3.190370e-06	-5.496159e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A29X-06A-11D-A196-08	190	187	3	120	1.578947e-02	coding only	1	28836781	...	64	117	182	2.219388e-06	4.057318e-06	6.311384e-06	-5.199875e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A2A0-06A-11D-A196-08	472	469	3	354	6.355932e-03	coding only	1	28836781	...	110	338	451	3.814573e-06	1.172114e-05	1.563975e-05	-4.805770e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2A1-06A-11D-A197-08	481	476	5	329	1.039501e-02	coding only	1	28836781	...	143	309	459	4.958945e-06	1.071548e-05	1.591717e-05	-4.798134e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A2A2-06A-11D-A196-08	1871	1848	23	1298	1.229289e-02	coding only	1	28836781	...	529	1162	1771	1.834463e-05	4.029576e-05	6.141462e-05	-4.211728e+00	...	78	28780584	...	2.710160e-06
TCGA-EE-A2A5-06A-11D-A197-08	392	385	7	270	1.785714e-02	coding only	1	28836781	...	111	259	376	3.849251e-06	8.981585e-06	1.303890e-05	-4.884759e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A2A6-06A-11D-A197-08	371	365	6	241	1.617251e-02	coding only	1	28836781	...	122	236	361	4.230708e-06	8.183993e-06	1.251873e-05	-4.902440e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2GB-06A-11D-A197-08	807	794	13	552	1.610905e-02	coding only	1	28836781	...	237	532	778	8.218670e-06	1.844866e-05	2.697943e-05	-4.568967e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A2GC-06A-11D-A197-08	2818	2783	35	1865	1.242016e-02	coding only	1	28836781	...	886	1798	2697	3.072465e-05	6.235093e-05	9.352639e-05	-4.029066e+00	...	13	28780584	...	4.516934e-07
TCGA-EE-A2GD-06A-11D-A196-08	684	672	12	461	1.754386e-02	coding only	1	28836781	...	208	442	656	7.213010e-06	1.532765e-05	2.274872e-05	-4.643043e+00	...	4	28780584	...	1.389826e-07
TCGA-EE-A2GE-06A-11D-A196-08	292	288	4	193	1.369863e-02	coding only	1	28836781	...	94	181	279	3.259726e-06	6.276706e-06	9.675144e-06	-5.014343e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2GH-06A-11D-A196-08	381	373	8	255	2.099738e-02	coding only	1	28836781	...	115	237	360	3.987962e-06	8.218670e-06	1.248406e-05	-4.903644e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A2GI-06A-11D-A196-08	1971	1946	25	1286	1.268392e-02	coding only	1	28836781	...	642	1232	1889	2.226323e-05	4.272322e-05	6.550662e-05	-4.183715e+00	...	12	28780584	...	4.169478e-07
TCGA-EE-A2GJ-06A-11D-A196-08	1421	1400	21	904	1.477833e-02	coding only	1	28836781	...	477	870	1355	1.654137e-05	3.016980e-05	4.698860e-05	-4.328007e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2GK-06A-11D-A196-08	16	16	0	16	0	coding only	1	28836781	...	0	12	15	0	4.161352e-07	5.201690e-07	-6.283856e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2GL-06A-11D-A196-08	441	433	8	291	1.814059e-02	coding only	1	28836781	...	140	280	424	4.854911e-06	9.709822e-06	1.470344e-05	-4.832581e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2GM-06B-11D-A196-08	869	854	15	580	1.726122e-02	coding only	1	28836781	...	264	549	826	9.154975e-06	1.903819e-05	2.864397e-05	-4.542967e+00	...	12	28780584	...	4.169478e-07
TCGA-EE-A2GN-06A-11D-A196-08	506	498	8	359	1.581028e-02	coding only	1	28836781	...	132	342	479	4.577487e-06	1.185985e-05	1.661073e-05	-4.779611e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2GO-06A-11D-A196-08	2472	2430	42	1572	1.699029e-02	coding only	1	28836781	...	823	1499	2338	2.853994e-05	5.198222e-05	8.107701e-05	-4.091102e+00	...	10	28780584	...	3.474565e-07
TCGA-EE-A2GP-06A-11D-A197-08	782	772	10	516	1.278772e-02	coding only	1	28836781	...	250	499	755	8.669484e-06	1.730429e-05	2.618184e-05	-4.582000e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A2GR-06A-11D-A197-08	1962	1932	30	1282	1.529052e-02	coding only	1	28836781	...	634	1227	1880	2.198581e-05	4.254983e-05	6.519452e-05	-4.185789e+00	...	18	28780584	...	6.254216e-07
TCGA-EE-A2GS-06A-12D-A197-08	420	408	12	288	2.857143e-02	coding only	1	28836781	...	113	275	390	3.918607e-06	9.536432e-06	1.352439e-05	-4.868882e+00	...	2	28780584	...	6.949129e-08
TCGA-EE-A2GT-06A-12D-A197-08	433	426	7	293	1.616628e-02	coding only	1	28836781	...	126	282	411	4.369420e-06	9.779178e-06	1.425263e-05	-4.846105e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A2GU-06A-11D-A196-08	736	725	11	488	1.494565e-02	coding only	1	28836781	...	233	473	708	8.079959e-06	1.640266e-05	2.455198e-05	-4.609914e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A2M5-06A-12D-A197-08	2431	2393	38	1624	1.563143e-02	coding only	1	28836781	...	747	1555	2321	2.590442e-05	5.392419e-05	8.048749e-05	-4.094272e+00	...	14	28780584	...	4.864391e-07
TCGA-EE-A2M6-06A-12D-A197-08	665	657	8	452	1.203008e-02	coding only	1	28836781	...	199	436	644	6.900909e-06	1.511958e-05	2.233259e-05	-4.651061e+00	...	9	28780584	...	3.127108e-07
TCGA-EE-A2M7-06A-11D-A197-08	84	81	3	51	3.571429e-02	coding only	1	28836781	...	29	50	80	1.005660e-06	1.733897e-06	2.774235e-06	-5.556857e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A2M8-06A-12D-A196-08	151	147	4	97	2.649007e-02	coding only	1	28836781	...	47	95	143	1.629863e-06	3.294404e-06	4.958945e-06	-5.304611e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A2MC-06A-12D-A197-08	944	932	12	631	1.271186e-02	coding only	1	28836781	...	284	603	894	9.848533e-06	2.091079e-05	3.100207e-05	-4.508609e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A2MD-06A-11D-A197-08	2092	2070	22	1368	1.051625e-02	coding only	1	28836781	...	673	1306	1991	2.333825e-05	4.528938e-05	6.904377e-05	-4.160876e+00	...	10	28780584	...	3.474565e-07
TCGA-EE-A2ME-06A-11D-A197-08	58	57	1	40	1.724138e-02	coding only	1	28836781	...	15	38	54	5.201690e-07	1.317762e-06	1.872608e-06	-5.727553e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A2MF-06A-11D-A21A-08	941	927	14	634	1.487779e-02	coding only	1	28836781	...	283	608	907	9.813855e-06	2.108418e-05	3.145289e-05	-4.502339e+00	...	15	28780584	...	5.211847e-07
TCGA-EE-A2MG-06A-11D-A197-08	270	268	2	184	7.407407e-03	coding only	1	28836781	...	79	179	258	2.739557e-06	6.207350e-06	8.946907e-06	-5.048327e+00	...	0	28780584	...	0
TCGA-EE-A2MH-06A-11D-A197-08	188	186	2	116	1.063830e-02	coding only	1	28836781	...	68	105	178	2.358100e-06	3.641183e-06	6.172672e-06	-5.209527e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2MI-06A-11D-A197-08	1322	1299	23	863	1.739788e-02	coding only	1	28836781	...	418	827	1254	1.449538e-05	2.867865e-05	4.348613e-05	-4.361649e+00	...	9	28780584	...	3.127108e-07
TCGA-EE-A2MJ-06A-11D-A197-08	2685	2653	32	1774	1.191806e-02	coding only	1	28836781	...	857	1711	2577	2.971899e-05	5.933395e-05	8.936504e-05	-4.048832e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2MK-06A-11D-A196-08	364	357	7	242	1.923077e-02	coding only	1	28836781	...	115	234	353	3.987962e-06	8.114637e-06	1.224131e-05	-4.912172e+00	...	4	28780584	...	1.389826e-07
TCGA-EE-A2ML-06A-11D-A197-08	688	677	11	458	1.598837e-02	coding only	1	28836781	...	212	434	654	7.351722e-06	1.505022e-05	2.267937e-05	-4.644369e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2MM-06A-11D-A196-08	700	691	9	458	1.285714e-02	coding only	1	28836781	...	225	435	668	7.802535e-06	1.508490e-05	2.316486e-05	-4.635170e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A2MN-06A-11D-A197-08	192	189	3	119	1.562500e-02	coding only	1	28836781	...	69	110	181	2.392777e-06	3.814573e-06	6.276706e-06	-5.202268e+00	...	2	28780584	...	6.949129e-08
TCGA-EE-A2MP-06A-11D-A197-08	338	335	3	246	8.875740e-03	coding only	1	28836781	...	84	232	323	2.912946e-06	8.045281e-06	1.120097e-05	-4.950744e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A2MQ-06A-11D-A197-08	333	332	1	228	3.003003e-03	coding only	1	28836781	...	103	212	321	3.571827e-06	7.351722e-06	1.113162e-05	-4.953442e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A2MR-06A-11D-A196-08	6292	6231	61	3886	9.694851e-03	coding only	1	28836781	...	2279	3734	6032	7.903101e-05	1.294874e-04	2.091773e-04	-3.679485e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A2MS-06A-11D-A197-08	3529	3489	40	2283	1.133466e-02	coding only	1	28836781	...	1161	2188	3367	4.026108e-05	7.587532e-05	1.167606e-04	-3.932704e+00	...	15	28780584	...	5.211847e-07
TCGA-EE-A2MT-06A-11D-A197-08	1092	1075	17	748	1.556777e-02	coding only	1	28836781	...	313	708	1034	1.085419e-05	2.455198e-05	3.585698e-05	-4.445426e+00	...	13	28780584	...	4.516934e-07
TCGA-EE-A2MU-06A-21D-A196-08	835	823	12	558	1.437126e-02	coding only	1	28836781	...	257	534	796	8.912229e-06	1.851802e-05	2.760364e-05	-4.559034e+00	...	2	28780584	...	6.949129e-08
TCGA-EE-A3AA-06A-11D-A196-08	2207	2184	23	1481	1.042139e-02	coding only	1	28836781	...	682	1421	2111	2.365035e-05	4.927734e-05	7.320512e-05	-4.135459e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A3AB-06A-11D-A196-08	810	798	12	568	1.481481e-02	coding only	1	28836781	...	224	552	777	7.767857e-06	1.914222e-05	2.694476e-05	-4.569526e+00	...	0	28780584	...	0
TCGA-EE-A3AC-06A-11D-A196-08	1230	1213	17	821	1.382114e-02	coding only	1	28836781	...	379	790	1176	1.314294e-05	2.739557e-05	4.078125e-05	-4.389539e+00	...	6	28780584	...	2.084739e-07
TCGA-EE-A3AD-06A-11D-A196-08	563	554	9	359	1.598579e-02	coding only	1	28836781	...	190	339	538	6.588808e-06	1.175582e-05	1.865673e-05	-4.729165e+00	...	7	28780584	...	2.432195e-07
TCGA-EE-A3AE-06A-11D-A196-08	1789	1763	26	1156	1.453326e-02	coding only	1	28836781	...	580	1116	1701	2.011320e-05	3.870057e-05	5.898717e-05	-4.229242e+00	...	4	28780584	...	1.389826e-07
TCGA-EE-A3AF-06A-11D-A196-08	1156	1145	11	819	9.515571e-03	coding only	1	28836781	...	312	777	1099	1.081952e-05	2.694476e-05	3.811105e-05	-4.418949e+00	...	9	28780584	...	3.127108e-07
TCGA-EE-A3AG-06A-31D-A196-08	2090	2061	29	1351	1.387560e-02	coding only	1	28836781	...	685	1289	1991	2.375439e-05	4.469986e-05	6.904377e-05	-4.160876e+00	...	14	28780584	...	4.864391e-07
TCGA-EE-A3AH-06A-11D-A196-08	475	470	5	335	1.052632e-02	coding only	1	28836781	...	135	306	457	4.681521e-06	1.061145e-05	1.584782e-05	-4.800031e+00	...	16	28780584	...	5.559303e-07
TCGA-EE-A3J3-06A-11D-A20D-08	226	220	6	141	2.654867e-02	coding only	1	28836781	...	76	134	212	2.635523e-06	4.646843e-06	7.351722e-06	-5.133611e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A3J4-06A-11D-A20D-08	397	386	11	282	2.770781e-02	coding only	1	28836781	...	96	268	370	3.329082e-06	9.293686e-06	1.283084e-05	-4.891745e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A3J5-06A-11D-A20D-08	2604	2559	45	1770	1.728111e-02	coding only	1	28836781	...	770	1693	2491	2.670201e-05	5.870974e-05	8.638273e-05	-4.063573e+00	...	20	28780584	...	6.949129e-07
TCGA-EE-A3J7-06A-11D-A20D-08	1241	1230	11	819	8.863820e-03	coding only	1	28836781	...	396	772	1184	1.373246e-05	2.677137e-05	4.105867e-05	-4.386595e+00	...	16	28780584	...	5.559303e-07
TCGA-EE-A3J8-06A-11D-A20D-08	337	329	8	227	2.373887e-02	coding only	1	28836781	...	100	210	313	3.467793e-06	7.282366e-06	1.085419e-05	-4.964402e+00	...	3	28780584	...	1.042369e-07
TCGA-EE-A3JA-06A-11D-A20D-08	1261	1245	16	805	1.268834e-02	coding only	1	28836781	...	417	768	1194	1.446070e-05	2.663265e-05	4.140545e-05	-4.382942e+00	...	8	28780584	...	2.779652e-07
TCGA-EE-A3JB-06A-11D-A21A-08	762	751	11	509	1.443570e-02	coding only	1	28836781	...	234	480	723	8.114637e-06	1.664541e-05	2.507215e-05	-4.600808e+00	...	8	28780584	...	2.779652e-07
TCGA-EE-A3JD-06A-11D-A20D-08	3627	3590	37	2371	1.020127e-02	coding only	1	28836781	...	1170	2275	3460	4.057318e-05	7.889230e-05	1.199857e-04	-3.920871e+00	...	9	28780584	...	3.127108e-07
TCGA-EE-A3JE-06A-11D-A20D-08	333	329	4	242	1.201201e-02	coding only	1	28836781	...	85	232	322	2.947624e-06	8.045281e-06	1.116629e-05	-4.952091e+00	...	5	28780584	...	1.737282e-07
TCGA-EE-A3JH-06A-11D-A21A-08	231	230	1	148	4.329004e-03	coding only	1	28836781	...	78	142	221	2.704879e-06	4.924267e-06	7.663824e-06	-5.115555e+00	...	1	28780584	...	3.474565e-08
TCGA-EE-A3JI-06A-11D-A21A-08	1425	1405	20	995	1.403509e-02	coding only	1	28836781	...	394	857	1356	1.366311e-05	2.971899e-05	4.702328e-05	-4.327687e+00	...	104	28780584	...	3.613547e-06
TCGA-ER-A193-06A-12D-A197-08	2359	2325	34	1611	1.441289e-02	coding only	1	28836781	...	693	1545	2258	2.403181e-05	5.357741e-05	7.830278e-05	-4.106223e+00	...	14	28780584	...	4.864391e-07
TCGA-ER-A195-06A-11D-A196-08	320	317	3	210	9.375000e-03	coding only	1	28836781	...	101	198	303	3.502471e-06	6.866231e-06	1.050741e-05	-4.978504e+00	...	4	28780584	...	1.389826e-07
TCGA-ER-A197-06A-32D-A197-08	56	56	0	46	0	coding only	1	28836781	...	10	44	55	3.467793e-07	1.525829e-06	1.907286e-06	-5.719584e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A198-06A-11D-A196-08	566	560	6	388	1.060071e-02	coding only	1	28836781	...	167	374	546	5.791215e-06	1.296955e-05	1.893415e-05	-4.722754e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A199-06A-11D-A197-08	346	339	7	238	2.023121e-02	coding only	1	28836781	...	100	231	335	3.467793e-06	8.010603e-06	1.161711e-05	-4.934902e+00	...	3	28780584	...	1.042369e-07
TCGA-ER-A19A-06A-21D-A197-08	439	437	2	281	4.555809e-03	coding only	1	28836781	...	150	271	422	5.201690e-06	9.397720e-06	1.463409e-05	-4.834634e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A19B-06A-11D-A196-08	139	139	0	105	0	coding only	1	28836781	...	33	97	132	1.144372e-06	3.363760e-06	4.577487e-06	-5.339373e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A19C-06A-11D-A196-08	130	125	5	77	3.846154e-02	exome+100bp flanks	2	35868282	...	46	73	120	1.282470e-06	2.035224e-06	3.345574e-06	-5.475529e+00	...	1	32148004	...	3.110613e-08
TCGA-ER-A19D-06A-11D-A197-08	572	561	11	360	1.923077e-02	coding only	1	28836781	...	192	346	542	6.658163e-06	1.199857e-05	1.879544e-05	-4.725947e+00	...	3	28780584	...	1.042369e-07
TCGA-ER-A19E-06A-11D-A197-08	551	545	6	380	1.088929e-02	coding only	1	28836781	...	161	361	529	5.583147e-06	1.251873e-05	1.834463e-05	-4.736491e+00	...	7	28780584	...	2.432195e-07
TCGA-ER-A19F-06A-11D-A196-08	1218	1201	17	823	1.395731e-02	coding only	1	28836781	...	357	792	1157	1.238002e-05	2.746492e-05	4.012237e-05	-4.396613e+00	...	7	28780584	...	2.432195e-07
TCGA-ER-A19G-06A-11D-A196-08	641	636	5	417	7.800312e-03	coding only	1	28836781	...	213	393	618	7.386400e-06	1.362843e-05	2.143096e-05	-4.668958e+00	...	12	28780584	...	4.169478e-07
TCGA-ER-A19H-06A-12D-A196-08	324	321	3	211	9.259259e-03	coding only	1	28836781	...	108	202	312	3.745217e-06	7.004943e-06	1.081952e-05	-4.965792e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A19J-06A-11D-A196-08	276	268	8	183	2.898551e-02	coding only	1	28836781	...	82	169	257	2.843591e-06	5.860571e-06	8.912229e-06	-5.050014e+00	...	6	28780584	...	2.084739e-07
TCGA-ER-A19L-06A-12D-A197-08	74	72	2	48	2.702703e-02	coding only	1	28836781	...	22	47	69	7.629146e-07	1.629863e-06	2.392777e-06	-5.621098e+00	...	0	28780584	...	0
TCGA-ER-A19M-06A-61D-A23B-08	603	595	8	389	1.326700e-02	coding only	1	28836781	...	197	375	575	6.831553e-06	1.300423e-05	1.993981e-05	-4.700279e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A19N-06A-11D-A197-08	588	579	9	401	1.530612e-02	coding only	1	28836781	...	167	387	554	5.791215e-06	1.342036e-05	1.921158e-05	-4.716437e+00	...	0	28780584	...	0
TCGA-ER-A19O-06A-11D-A197-08	214	211	3	148	1.401869e-02	coding only	1	28836781	...	63	142	207	2.184710e-06	4.924267e-06	7.178332e-06	-5.143976e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A19P-06A-11D-A196-08	982	969	13	713	1.323829e-02	coding only	1	28836781	...	248	672	936	8.600128e-06	2.330357e-05	3.245855e-05	-4.488671e+00	...	16	28780584	...	5.559303e-07
TCGA-ER-A19Q-06A-11D-A197-08	150	150	0	108	0	coding only	1	28836781	...	41	102	146	1.421795e-06	3.537149e-06	5.062978e-06	-5.295594e+00	...	3	28780584	...	1.042369e-07
TCGA-ER-A19S-06A-11D-A196-08	269	265	4	185	1.486989e-02	coding only	1	28836781	...	77	179	257	2.670201e-06	6.207350e-06	8.912229e-06	-5.050014e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A19T-06A-11D-A19A-08	65	64	1	53	1.538462e-02	coding only	1	28836781	...	11	48	63	3.814573e-07	1.664541e-06	2.184710e-06	-5.660606e+00	...	4	28780584	...	1.389826e-07
TCGA-ER-A19W-06A-41D-A23B-08	439	431	8	275	1.822323e-02	coding only	1	28836781	...	147	258	413	5.097656e-06	8.946907e-06	1.432199e-05	-4.843997e+00	...	5	28780584	...	1.737282e-07
TCGA-ER-A1A1-06A-11D-A197-08	294	292	2	203	6.802721e-03	coding only	1	28836781	...	86	196	284	2.982302e-06	6.796875e-06	9.848533e-06	-5.006628e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A2NC-06A-11D-A197-08	474	466	8	312	1.687764e-02	coding only	1	28836781	...	151	298	452	5.236368e-06	1.033402e-05	1.567443e-05	-4.804808e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A2ND-06A-11D-A196-08	133	130	3	99	2.255639e-02	coding only	1	28836781	...	31	91	123	1.075016e-06	3.155692e-06	4.265386e-06	-5.370042e+00	...	1	28780584	...	3.474565e-08
TCGA-ER-A2NE-06A-21D-A196-08	174	171	3	124	1.724138e-02	coding only	1	28836781	...	44	116	165	1.525829e-06	4.022640e-06	5.721859e-06	-5.242463e+00	...	5	28780584	...	1.737282e-07
TCGA-ER-A2NF-06A-11D-A19A-08	40	39	1	27	2.500000e-02	coding only	1	28836781	...	11	24	37	3.814573e-07	8.322704e-07	1.283084e-06	-5.891745e+00	...	2	28780584	...	6.949129e-08
TCGA-ER-A2NG-06A-11D-A196-08	310	304	6	214	1.935484e-02	coding only	1	28836781	...	88	201	293	3.051658e-06	6.970265e-06	1.016063e-05	-4.993079e+00	...	3	28780584	...	1.042369e-07
TCGA-ER-A2NH-06A-11D-A196-08	393	388	5	258	1.272265e-02	coding only	1	28836781	...	126	249	379	4.369420e-06	8.634806e-06	1.314294e-05	-4.881308e+00	...	4	28780584	...	1.389826e-07
TCGA-ER-A3ES-06A-11D-A20D-08	41	40	1	35	2.439024e-02	coding only	1	28836781	...	5	29	39	1.733897e-07	1.005660e-06	1.352439e-06	-5.868882e+00	...	5	28780584	...	1.737282e-07
TCGA-ER-A3ET-06A-11D-A20D-08	121	120	1	95	8.264463e-03	coding only	1	28836781	...	24	91	119	8.322704e-07	3.155692e-06	4.126674e-06	-5.384400e+00	...	4	28780584	...	1.389826e-07
TCGA-ER-A3EV-06A-11D-A20D-08	118	118	0	95	0	coding only	1	28836781	...	20	85	113	6.935587e-07	2.947624e-06	3.918607e-06	-5.406868e+00	...	8	28780584	...	2.779652e-07
TCGA-ER-A3PL-06A-11D-A23B-08	462	457	5	294	1.082251e-02	coding only	1	28836781	...	154	272	431	5.340402e-06	9.432398e-06	1.494619e-05	-4.825470e+00	...	4	28780584	...	1.389826e-07
TCGA-ER-A42K-06A-11D-A24R-08	239	233	6	162	2.510460e-02	coding only	1	28836781	...	70	152	225	2.427455e-06	5.271046e-06	7.802535e-06	-5.107764e+00	...	3	28780584	...	1.042369e-07
TCGA-ER-A42L-06A-11D-A24R-08	1258	1238	20	821	1.589825e-02	coding only	1	28836781	...	404	787	1195	1.400989e-05	2.729153e-05	4.144013e-05	-4.382579e+00	...	3	28780584	...	1.042369e-07
TCGA-FR-A3YN-06A-11D-A23B-08	723	710	13	467	1.798064e-02	coding only	1	28836781	...	238	446	695	8.253348e-06	1.546636e-05	2.410116e-05	-4.617962e+00	...	9	28780584	...	3.127108e-07
TCGA-FR-A3YO-06A-11D-A23B-08	1071	1058	13	698	1.213819e-02	coding only	1	28836781	...	354	668	1025	1.227599e-05	2.316486e-05	3.554488e-05	-4.449223e+00	...	3	28780584	...	1.042369e-07
TCGA-FR-A44A-06A-11D-A24R-08	379	374	5	243	1.319261e-02	coding only	1	28836781	...	129	230	363	4.473454e-06	7.975925e-06	1.258809e-05	-4.900040e+00	...	4	28780584	...	1.389826e-07
TCGA-FR-A69P-06A-21D-A30X-08	276	271	5	191	1.811594e-02	coding only	1	28836781	...	78	182	263	2.704879e-06	6.311384e-06	9.120297e-06	-5.039991e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1YW-06A-11D-A197-08	207	199	8	139	3.864734e-02	exome+100bp flanks	2	35868282	...	59	129	194	1.644907e-06	3.596492e-06	5.408678e-06	-5.266909e+00	...	4	32148004	...	1.244245e-07
TCGA-FS-A1YX-06A-11D-A197-08	30	30	0	25	0	coding only	1	28836781	...	5	19	28	1.733897e-07	6.588808e-07	9.709822e-07	-6.012789e+00	...	4	28780584	...	1.389826e-07
TCGA-FS-A1YY-06A-11D-A197-08	259	253	6	162	2.316602e-02	coding only	1	28836781	...	89	155	249	3.086336e-06	5.375080e-06	8.634806e-06	-5.063747e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1Z0-06A-11D-A197-08	318	316	2	223	6.289308e-03	coding only	1	28836781	...	88	212	302	3.051658e-06	7.351722e-06	1.047274e-05	-4.979940e+00	...	2	28780584	...	6.949129e-08
TCGA-FS-A1Z3-06A-11D-A197-08	1270	1250	20	858	1.574803e-02	coding only	1	28836781	...	386	828	1223	1.338568e-05	2.871333e-05	4.241111e-05	-4.372520e+00	...	8	28780584	...	2.779652e-07
TCGA-FS-A1Z4-06A-11D-A197-08	56	56	0	43	0	coding only	1	28836781	...	12	37	53	4.161352e-07	1.283084e-06	1.837931e-06	-5.735671e+00	...	4	28780584	...	1.389826e-07
TCGA-FS-A1Z7-06A-11D-A197-08	229	227	2	152	8.733624e-03	coding only	1	28836781	...	74	147	223	2.566167e-06	5.097656e-06	7.733179e-06	-5.111642e+00	...	2	28780584	...	6.949129e-08
TCGA-FS-A1ZA-06A-11D-A197-08	1460	1438	22	973	1.506849e-02	coding only	1	28836781	...	446	938	1394	1.546636e-05	3.252790e-05	4.834104e-05	-4.315684e+00	...	8	28780584	...	2.779652e-07
TCGA-FS-A1ZB-06A-12D-A197-08	297	293	4	197	1.346801e-02	coding only	1	28836781	...	91	189	282	3.155692e-06	6.554130e-06	9.779178e-06	-5.009698e+00	...	2	28780584	...	6.949129e-08
TCGA-FS-A1ZC-06A-11D-A197-08	887	871	16	566	1.803833e-02	coding only	1	28836781	...	296	543	847	1.026467e-05	1.883012e-05	2.937221e-05	-4.532063e+00	...	4	28780584	...	1.389826e-07
TCGA-FS-A1ZD-06A-11D-A197-08	308	306	2	221	6.493506e-03	coding only	1	28836781	...	84	208	300	2.912946e-06	7.213010e-06	1.040338e-05	-4.982826e+00	...	8	28780584	...	2.779652e-07
TCGA-FS-A1ZE-06A-11D-A197-08	189	180	9	129	4.761905e-02	exome+100bp flanks	2	35868282	...	50	117	175	1.393989e-06	3.261935e-06	4.878962e-06	-5.311673e+00	...	8	32148004	...	2.488490e-07
TCGA-FS-A1ZF-06A-12D-A197-08	250	240	10	162	4.000000e-02	exome+100bp flanks	2	35868282	...	76	158	235	2.118864e-06	4.405006e-06	6.551750e-06	-5.183643e+00	...	1	32148004	...	3.110613e-08
TCGA-FS-A1ZG-06A-11D-A197-08	44	44	0	29	0	coding only	1	28836781	...	15	25	43	5.201690e-07	8.669484e-07	1.491151e-06	-5.826478e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1ZH-06A-11D-A197-08	42	41	1	30	2.380952e-02	coding only	1	28836781	...	11	27	39	3.814573e-07	9.363042e-07	1.352439e-06	-5.868882e+00	...	1	28780584	...	3.474565e-08
TCGA-FS-A1ZJ-06A-12D-A197-08	103	100	3	78	2.912621e-02	coding only	1	28836781	...	19	74	98	6.588808e-07	2.566167e-06	3.398438e-06	-5.468721e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1ZK-06A-11D-A197-08	1935	1915	20	1269	1.033592e-02	coding only	1	28836781	...	617	1222	1850	2.139629e-05	4.237644e-05	6.415418e-05	-4.192775e+00	...	9	28780584	...	3.127108e-07
TCGA-FS-A1ZM-06A-12D-A197-08	306	299	7	213	2.287582e-02	coding only	1	28836781	...	82	203	289	2.843591e-06	7.039621e-06	1.002192e-05	-4.999049e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1ZP-06A-11D-A197-08	540	538	2	351	3.703704e-03	coding only	1	28836781	...	179	340	522	6.207350e-06	1.179050e-05	1.810188e-05	-4.742276e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1ZQ-06A-11D-A197-08	623	614	9	395	1.444623e-02	coding only	1	28836781	...	217	385	603	7.525112e-06	1.335100e-05	2.091079e-05	-4.679629e+00	...	1	28780584	...	3.474565e-08
TCGA-FS-A1ZR-06A-21D-A197-08	181	180	1	128	5.524862e-03	coding only	1	28836781	...	50	124	176	1.733897e-06	4.300064e-06	6.103316e-06	-5.214434e+00	...	2	28780584	...	6.949129e-08
TCGA-FS-A1ZS-06A-12D-A197-08	345	339	6	212	1.739130e-02	coding only	1	28836781	...	124	200	329	4.300064e-06	6.935587e-06	1.140904e-05	-4.942751e+00	...	5	28780584	...	1.737282e-07
TCGA-FS-A1ZT-06A-11D-A197-08	220	212	8	147	3.636364e-02	exome+100bp flanks	2	35868282	...	63	138	202	1.756426e-06	3.847410e-06	5.631717e-06	-5.249359e+00	...	1	32148004	...	3.110613e-08
TCGA-FS-A1ZU-06A-12D-A196-08	59	56	3	39	5.084746e-02	coding only	1	28836781	...	17	35	56	5.895249e-07	1.213728e-06	1.941964e-06	-5.711759e+00	...	4	28780584	...	1.389826e-07
TCGA-FS-A1ZW-06A-12D-A197-08	804	790	14	540	1.741294e-02	coding only	1	28836781	...	244	521	769	8.461416e-06	1.806720e-05	2.666733e-05	-4.574020e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A1ZY-06A-11D-A197-08	42	39	3	26	7.142857e-02	coding only	1	28836781	...	12	24	36	4.161352e-07	8.322704e-07	1.248406e-06	-5.903644e+00	...	0	28780584	...	0
TCGA-FS-A1ZZ-06A-11D-A197-08	1933	1898	35	1224	1.810657e-02	coding only	1	28836781	...	645	1173	1827	2.236727e-05	4.067722e-05	6.335659e-05	-4.198208e+00	...	5	28780584	...	1.737282e-07
TCGA-FS-A4F0-06A-11D-A24R-08	649	641	8	457	1.232666e-02	coding only	1	28836781	...	180	429	618	6.242028e-06	1.487683e-05	2.143096e-05	-4.668958e+00	...	7	28780584	...	2.432195e-07
TCGA-FS-A4F4-06A-12D-A25O-08	60	58	2	42	3.333333e-02	coding only	1	28836781	...	16	36	56	5.548470e-07	1.248406e-06	1.941964e-06	-5.711759e+00	...	4	28780584	...	1.389826e-07
TCGA-FS-A4F5-06A-11D-A25O-08	939	922	17	640	1.810437e-02	coding only	1	28836781	...	270	614	890	9.363042e-06	2.129225e-05	3.086336e-05	-4.510557e+00	...	5	28780584	...	1.737282e-07
TCGA-FS-A4F8-06A-11D-A25O-08	222	220	2	159	9.009009e-03	coding only	1	28836781	...	58	152	211	2.011320e-06	5.271046e-06	7.317044e-06	-5.135664e+00	...	1	28780584	...	3.474565e-08
TCGA-FS-A4F9-06A-11D-A24R-08	566	556	10	377	1.766784e-02	coding only	1	28836781	...	172	333	539	5.964605e-06	1.154775e-05	1.869141e-05	-4.728358e+00	...	34	28780584	...	1.181352e-06
TCGA-FS-A4FB-06A-11D-A25O-08	228	223	5	158	2.192982e-02	coding only	1	28836781	...	61	147	213	2.115354e-06	5.097656e-06	7.386400e-06	-5.131567e+00	...	5	28780584	...	1.737282e-07
TCGA-FS-A4FC-06A-11D-A24R-08	885	878	7	605	7.909605e-03	coding only	1	28836781	...	266	577	847	9.224331e-06	2.000917e-05	2.937221e-05	-4.532063e+00	...	3	28780584	...	1.042369e-07
TCGA-FS-A4FD-06A-11D-A25O-08	556	547	9	373	1.618705e-02	coding only	1	28836781	...	169	356	528	5.860571e-06	1.234534e-05	1.830995e-05	-4.737313e+00	...	3	28780584	...	1.042369e-07
TCGA-FW-A3I3-06A-11D-A21A-08	84	82	2	56	2.380952e-02	coding only	1	28836781	...	25	47	81	8.669484e-07	1.629863e-06	2.808913e-06	-5.551462e+00	...	9	28780584	...	3.127108e-07
TCGA-FW-A3R5-06A-11D-A23B-08	24822	24445	377	15752	1.518814e-02	coding only	1	28836781	...	8412	15221	23677	2.917108e-04	5.278328e-04	8.210695e-04	-3.085620e+00	...	13	28780584	...	4.516934e-07
TCGA-FW-A3TU-06A-11D-A23B-08	929	918	11	622	1.184069e-02	coding only	1	28836781	...	286	588	881	9.917889e-06	2.039063e-05	3.055126e-05	-4.514971e+00	...	7	28780584	...	2.432195e-07
TCGA-FW-A3TV-06A-11D-A23B-08	419	411	8	279	1.909308e-02	coding only	1	28836781	...	130	271	402	4.508131e-06	9.397720e-06	1.394053e-05	-4.855721e+00	...	1	28780584	...	3.474565e-08
TCGA-FW-A5DY-06A-11D-A30X-08	283	280	3	187	1.060071e-02	coding only	1	28836781	...	91	184	276	3.155692e-06	6.380740e-06	9.571110e-06	-5.019038e+00	...	1	28780584	...	3.474565e-08
TCGA-GF-A3OT-06A-23D-A23B-08	673	665	8	445	1.188707e-02	coding only	1	28836781	...	216	422	644	7.490434e-06	1.463409e-05	2.233259e-05	-4.651061e+00	...	5	28780584	...	1.737282e-07
TCGA-GF-A4EO-06A-12D-A24R-08	313	306	7	211	2.236422e-02	coding only	1	28836781	...	92	198	300	3.190370e-06	6.866231e-06	1.040338e-05	-4.982826e+00	...	6	28780584	...	2.084739e-07
TCGA-GF-A6C8-06A-12D-A30X-08	459	453	6	311	1.307190e-02	coding only	1	28836781	...	139	302	446	4.820233e-06	1.047274e-05	1.546636e-05	-4.810612e+00	...	3	28780584	...	1.042369e-07
TCGA-GF-A6C9-06A-11D-A30X-08	4225	4186	39	2744	9.230769e-03	coding only	1	28836781	...	1390	2644	4050	4.820233e-05	9.168846e-05	1.404456e-04	-3.852492e+00	...	14	28780584	...	4.864391e-07
TCGA-GN-A262-06A-11D-A196-08	472	469	3	340	6.355932e-03	coding only	1	28836781	...	125	322	453	4.334742e-06	1.116629e-05	1.570910e-05	-4.803849e+00	...	5	28780584	...	1.737282e-07
TCGA-GN-A264-06A-11D-A196-08	63	61	2	48	3.174603e-02	coding only	1	28836781	...	12	38	57	4.161352e-07	1.317762e-06	1.976642e-06	-5.704072e+00	...	7	28780584	...	2.432195e-07
TCGA-GN-A265-06A-21D-A197-08	362	359	3	275	8.287293e-03	coding only	1	28836781	...	84	260	351	2.912946e-06	9.016263e-06	1.217195e-05	-4.914640e+00	...	7	28780584	...	2.432195e-07
TCGA-GN-A266-06A-11D-A197-08	4753	4696	57	3092	1.199243e-02	coding only	1	28836781	...	1563	2984	4562	5.420161e-05	1.034790e-04	1.582007e-04	-3.800791e+00	...	13	28780584	...	4.516934e-07
TCGA-GN-A267-06A-21D-A196-08	499	494	5	328	1.002004e-02	coding only	1	28836781	...	161	305	475	5.583147e-06	1.057677e-05	1.647202e-05	-4.783253e+00	...	8	28780584	...	2.779652e-07
TCGA-GN-A268-06A-11D-A196-08	424	421	3	287	7.075472e-03	coding only	1	28836781	...	132	271	407	4.577487e-06	9.397720e-06	1.411392e-05	-4.850352e+00	...	4	28780584	...	1.389826e-07
TCGA-GN-A26A-06A-11D-A19A-08	407	402	5	284	1.228501e-02	coding only	1	28836781	...	110	266	380	3.814573e-06	9.224331e-06	1.317762e-05	-4.880163e+00	...	3	28780584	...	1.042369e-07
TCGA-GN-A26D-06A-11D-A19A-08	61	60	1	48	1.639344e-02	coding only	1	28836781	...	12	43	58	4.161352e-07	1.491151e-06	2.011320e-06	-5.696519e+00	...	3	28780584	...	1.042369e-07
TCGA-QB-A6FS-06A-11D-A30X-08	1437	1418	19	959	1.322199e-02	coding only	1	28836781	...	442	915	1360	1.532765e-05	3.173031e-05	4.716199e-05	-4.326408e+00	...	2	28780584	...	6.949129e-08
TCGA-RP-A690-06A-11D-A30X-08	19	18	1	14	5.263158e-02	coding only	1	28836781	...	4	13	17	1.387117e-07	4.508131e-07	5.895249e-07	-6.229498e+00	...	0	28780584	...	0
TCGA-RP-A693-06A-13D-A30X-08	942	930	12	658	1.273885e-02	coding only	1	28836781	...	263	632	900	9.120297e-06	2.191645e-05	3.121014e-05	-4.505704e+00	...	5	28780584	...	1.737282e-07
TCGA-RP-A694-06A-11D-A30X-08	857	846	11	571	1.283547e-02	coding only	1	28836781	...	267	538	810	9.259008e-06	1.865673e-05	2.808913e-05	-4.551462e+00	...	3	28780584	...	1.042369e-07
TCGA-RP-A695-06A-11D-A30X-08	1053	1039	14	715	1.329535e-02	coding only	1	28836781	...	315	683	1006	1.092355e-05	2.368503e-05	3.488600e-05	-4.457349e+00	...	8	28780584	...	2.779652e-07
