
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/STAD-TP/11493932/STAD-TP.meth.by_max_stddev.data.txt", "-u5989", "-oSTAD-TP")
Cluster size 5989 broken into 2525 3464 
Cluster size 2525 broken into 1421 1104 
Done cluster 1421 
Done cluster 1104 
Done cluster 2525 
Cluster size 3464 broken into 2639 825 
Cluster size 2639 broken into 1308 1331 
Done cluster 1308 
Done cluster 1331 
Done cluster 2639 
Done cluster 825 
Done cluster 3464 
> q(save="no")
