name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-B7-5816-01A-21D-1600-08	1444	1435	9	1069	6.232687e-03	coding only	1	28836834	...	365	1061	1429	1.265742e-05	3.679322e-05	4.955468e-05	-4.304915e+00	...	1	28780638	...	3.474558e-08
TCGA-B7-5818-01A-11D-1600-08	474	467	7	351	1.476793e-02	coding only	1	28836834	...	115	346	465	3.987955e-06	1.199854e-05	1.612521e-05	-4.792495e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-4183-01A-02D-1126-08	76	72	4	51	5.263158e-02	coding only	1	28836834	...	21	49	72	7.282353e-07	1.699216e-06	2.496807e-06	-5.602615e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4184-01A-01D-1126-08	4566	4522	44	3221	9.636443e-03	coding only	1	28836834	...	1288	3156	4487	4.466510e-05	1.094434e-04	1.555996e-04	-3.807992e+00	...	37	28780638	...	1.285587e-06
TCGA-BR-4187-01A-01D-1126-08	45	42	3	31	6.666667e-02	coding only	1	28836834	...	11	29	42	3.814566e-07	1.005658e-06	1.456471e-06	-5.836698e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4188-01A-01D-1126-08	93	92	1	70	1.075269e-02	coding only	1	28836834	...	22	68	90	7.629132e-07	2.358095e-06	3.121008e-06	-5.505705e+00	...	0	28780638	...	0
TCGA-BR-4191-01A-02D-1126-08	233	227	6	176	2.575107e-02	coding only	1	28836834	...	51	168	224	1.768571e-06	5.825882e-06	7.767843e-06	-5.109700e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-4201-01A-01D-1126-08	1431	1409	22	987	1.537386e-02	coding only	1	28836834	...	422	969	1405	1.463406e-05	3.360286e-05	4.872241e-05	-4.312271e+00	...	13	28780638	...	4.516926e-07
TCGA-BR-4253-01A-01D-1126-08	109	105	4	79	3.669725e-02	coding only	1	28836834	...	25	76	103	8.669468e-07	2.635518e-06	3.571821e-06	-5.447110e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4255-01A-01D-1126-08	79	76	3	47	3.797468e-02	coding only	1	28836834	...	29	46	75	1.005658e-06	1.595182e-06	2.600840e-06	-5.584886e+00	...	0	28780638	...	0
TCGA-BR-4256-01A-01D-1126-08	1104	1091	13	756	1.177536e-02	coding only	1	28836834	...	332	744	1083	1.151305e-05	2.580034e-05	3.755613e-05	-4.425319e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4257-01A-01D-1126-08	1214	1204	10	825	8.237232e-03	coding only	1	28836834	...	374	775	1193	1.296952e-05	2.687535e-05	4.137070e-05	-4.383307e+00	...	40	28780638	...	1.389823e-06
TCGA-BR-4267-01A-01D-1126-08	110	106	4	79	3.636364e-02	coding only	1	28836834	...	27	77	105	9.363025e-07	2.670196e-06	3.641176e-06	-5.438758e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4279-01A-01D-1126-08	65	62	3	37	4.615385e-02	coding only	1	28836834	...	24	37	61	8.322689e-07	1.283081e-06	2.115350e-06	-5.674618e+00	...	0	28780638	...	0
TCGA-BR-4280-01A-01D-1126-08	866	847	19	650	2.193995e-02	coding only	1	28836834	...	196	545	841	6.796863e-06	1.889944e-05	2.916409e-05	-4.535152e+00	...	98	28780638	...	3.405067e-06
TCGA-BR-4292-01A-01D-1126-08	1545	1525	20	1106	1.294498e-02	coding only	1	28836834	...	413	972	1508	1.432196e-05	3.370689e-05	5.229423e-05	-4.281546e+00	...	114	28780638	...	3.960996e-06
TCGA-BR-4294-01A-01D-1126-08	39	38	1	30	2.564103e-02	coding only	1	28836834	...	8	29	37	2.774230e-07	1.005658e-06	1.283081e-06	-5.891746e+00	...	0	28780638	...	0
TCGA-BR-4357-01A-01D-1158-08	295	294	1	223	3.389831e-03	coding only	1	28836834	...	71	221	293	2.462129e-06	7.663809e-06	1.016062e-05	-4.993080e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4361-01A-01D-1158-08	3258	3226	32	2316	9.821977e-03	coding only	1	28836834	...	906	2186	3209	3.141815e-05	7.580583e-05	1.112813e-04	-3.953578e+00	...	109	28780638	...	3.787268e-06
TCGA-BR-4362-01A-01D-1158-08	1877	1860	17	1354	9.057006e-03	coding only	1	28836834	...	504	1301	1846	1.747765e-05	4.511591e-05	6.401535e-05	-4.193716e+00	...	41	28780638	...	1.424569e-06
TCGA-BR-4363-01A-01D-1158-08	597	592	5	431	8.375209e-03	coding only	1	28836834	...	161	377	589	5.583137e-06	1.307356e-05	2.042527e-05	-4.689832e+00	...	49	28780638	...	1.702533e-06
TCGA-BR-4366-01A-01D-1158-08	172	172	0	127	0	coding only	1	28836834	...	45	126	171	1.560504e-06	4.369412e-06	5.929916e-06	-5.226951e+00	...	0	28780638	...	0
TCGA-BR-4368-01A-01D-1158-08	1490	1472	18	1030	1.208054e-02	coding only	1	28836834	...	442	995	1467	1.532762e-05	3.450448e-05	5.087244e-05	-4.293517e+00	...	27	28780638	...	9.381307e-07
TCGA-BR-4369-01A-01D-1158-08	208	206	2	152	9.615385e-03	coding only	1	28836834	...	54	150	205	1.872605e-06	5.201681e-06	7.108963e-06	-5.148194e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4370-01A-01D-1158-08	1181	1171	10	827	8.467401e-03	coding only	1	28836834	...	343	813	1164	1.189451e-05	2.819311e-05	4.036504e-05	-4.393995e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-4371-01A-01D-1158-08	190	187	3	136	1.578947e-02	coding only	1	28836834	...	51	136	187	1.768571e-06	4.716190e-06	6.484762e-06	-5.188106e+00	...	0	28780638	...	0
TCGA-BR-6452-01A-12D-1800-08	8664	8588	76	6264	8.771930e-03	coding only	1	28836834	...	2312	6195	8545	8.017524e-05	2.148294e-04	2.963224e-04	-3.528236e+00	...	26	28780638	...	9.033851e-07
TCGA-BR-6453-01A-11D-1800-08	233	230	3	167	1.287554e-02	coding only	1	28836834	...	63	163	228	2.184706e-06	5.652493e-06	7.906555e-06	-5.102013e+00	...	0	28780638	...	0
TCGA-BR-6454-01A-11D-1800-08	174	172	2	128	1.149425e-02	coding only	1	28836834	...	44	122	170	1.525826e-06	4.230700e-06	5.895238e-06	-5.229499e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-6455-01A-11D-1800-08	116	115	1	75	8.620690e-03	coding only	1	28836834	...	38	73	112	1.317759e-06	2.531485e-06	3.883922e-06	-5.410730e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6456-01A-11D-1800-08	52	51	1	37	1.923077e-02	coding only	1	28836834	...	14	34	50	4.854902e-07	1.179048e-06	1.733894e-06	-5.760978e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6457-01A-21D-1800-08	146	145	1	108	6.849315e-03	coding only	1	28836834	...	37	108	145	1.283081e-06	3.745210e-06	5.028291e-06	-5.298580e+00	...	0	28780638	...	0
TCGA-BR-6458-01A-11D-1800-08	347	345	2	256	5.763689e-03	coding only	1	28836834	...	89	252	343	3.086330e-06	8.738823e-06	1.189451e-05	-4.924653e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6563-01A-13D-2053-08	93	92	1	72	1.075269e-02	coding only	1	28836834	...	20	71	92	6.935574e-07	2.462129e-06	3.190364e-06	-5.496160e+00	...	0	28780638	...	0
TCGA-BR-6564-01A-12D-1882-08	43	42	1	29	2.325581e-02	coding only	1	28836834	...	13	29	42	4.508123e-07	1.005658e-06	1.456471e-06	-5.836698e+00	...	0	28780638	...	0
TCGA-BR-6565-01A-11D-1800-08	170	168	2	133	1.176471e-02	coding only	1	28836834	...	35	132	167	1.213725e-06	4.577479e-06	5.791204e-06	-5.237231e+00	...	0	28780638	...	0
TCGA-BR-6566-01A-11D-1800-08	1065	1057	8	754	7.511737e-03	coding only	1	28836834	...	299	735	1050	1.036868e-05	2.548823e-05	3.641176e-05	-4.438758e+00	...	13	28780638	...	4.516926e-07
TCGA-BR-6705-01A-12D-1882-08	126	123	3	96	2.380952e-02	coding only	1	28836834	...	27	96	123	9.363025e-07	3.329076e-06	4.265378e-06	-5.370042e+00	...	0	28780638	...	0
TCGA-BR-6706-01A-11D-1882-08	262	262	0	205	0	coding only	1	28836834	...	56	205	261	1.941961e-06	7.108963e-06	9.050924e-06	-5.043307e+00	...	0	28780638	...	0
TCGA-BR-6707-01A-11D-1882-08	82	82	0	63	0	coding only	1	28836834	...	19	62	82	6.588795e-07	2.150028e-06	2.843585e-06	-5.546134e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6710-01A-11D-1882-08	1	1	0	0	0	coding only	1	28836834	...	0	0	0	0	0	0	-9	...	0	28780638	...	0
TCGA-BR-6801-01A-11D-1882-08	62	61	1	40	1.612903e-02	coding only	1	28836834	...	20	36	60	6.935574e-07	1.248403e-06	2.080672e-06	-5.681796e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-6802-01A-11D-1882-08	546	540	6	376	1.098901e-02	coding only	1	28836834	...	163	368	536	5.652493e-06	1.276146e-05	1.858734e-05	-4.730783e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-6803-01A-11D-1882-08	23	22	1	18	4.347826e-02	coding only	1	28836834	...	4	17	22	1.387115e-07	5.895238e-07	7.629132e-07	-6.117525e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6852-01A-11D-1882-08	1245	1231	14	886	1.124498e-02	coding only	1	28836834	...	340	873	1225	1.179048e-05	3.027378e-05	4.248039e-05	-4.371811e+00	...	10	28780638	...	3.474558e-07
TCGA-BR-7196-01A-11D-2053-08	85	84	1	61	1.176471e-02	coding only	1	28836834	...	23	60	84	7.975910e-07	2.080672e-06	2.912941e-06	-5.535668e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7197-01A-11D-2201-08	198	196	2	148	1.010101e-02	coding only	1	28836834	...	46	145	192	1.595182e-06	5.028291e-06	6.658151e-06	-5.176646e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7703-01A-11D-2053-08	816	808	8	596	9.803922e-03	coding only	1	28836834	...	211	546	800	7.317031e-06	1.893412e-05	2.774230e-05	-4.556858e+00	...	42	28780638	...	1.459314e-06
TCGA-BR-7707-01A-11D-2053-08	1617	1599	18	1159	1.113173e-02	coding only	1	28836834	...	439	1111	1592	1.522359e-05	3.852711e-05	5.520717e-05	-4.258005e+00	...	36	28780638	...	1.250841e-06
TCGA-BR-7715-01A-11D-2053-08	163	163	0	125	0	coding only	1	28836834	...	38	119	163	1.317759e-06	4.126667e-06	5.652493e-06	-5.247760e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-7716-01A-21D-2053-08	189	188	1	142	5.291005e-03	coding only	1	28836834	...	45	140	186	1.560504e-06	4.854902e-06	6.450084e-06	-5.190435e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7717-01A-11D-2053-08	164	163	1	114	6.097561e-03	coding only	1	28836834	...	49	113	163	1.699216e-06	3.918599e-06	5.652493e-06	-5.247760e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7722-01A-31D-2201-08	62	61	1	47	1.612903e-02	coding only	1	28836834	...	14	43	61	4.854902e-07	1.491148e-06	2.115350e-06	-5.674618e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-7723-01A-11D-2053-08	193	190	3	140	1.554404e-02	coding only	1	28836834	...	50	138	189	1.733894e-06	4.785546e-06	6.554118e-06	-5.183486e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7851-01A-11D-2201-08	1672	1664	8	1156	4.784689e-03	coding only	1	28836834	...	506	1067	1655	1.754700e-05	3.700129e-05	5.739188e-05	-4.241150e+00	...	80	28780638	...	2.779647e-06
TCGA-BR-7901-01A-11D-2201-08	243	243	0	173	0	coding only	1	28836834	...	70	170	241	2.427451e-06	5.895238e-06	8.357367e-06	-5.077931e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-7957-01A-11D-2201-08	61	60	1	47	1.639344e-02	coding only	1	28836834	...	13	47	60	4.508123e-07	1.629860e-06	2.080672e-06	-5.681796e+00	...	0	28780638	...	0
TCGA-BR-8059-01A-11D-2340-08	726	720	6	535	8.264463e-03	coding only	1	28836834	...	181	529	714	6.276695e-06	1.834459e-05	2.476000e-05	-4.606249e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8077-01A-11D-2340-08	138	134	4	103	2.898551e-02	coding only	1	28836834	...	30	100	133	1.040336e-06	3.467787e-06	4.612157e-06	-5.336096e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8080-01A-11D-2340-08	174	169	5	133	2.873563e-02	coding only	1	28836834	...	36	131	169	1.248403e-06	4.542801e-06	5.860560e-06	-5.232061e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8081-01A-11D-2340-08	942	933	9	637	9.554140e-03	coding only	1	28836834	...	292	618	924	1.012594e-05	2.143092e-05	3.204235e-05	-4.494276e+00	...	12	28780638	...	4.169470e-07
TCGA-BR-8284-01A-11D-2340-08	347	347	0	245	0	coding only	1	28836834	...	101	243	346	3.502465e-06	8.426723e-06	1.199854e-05	-4.920871e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8295-01A-11D-2340-08	57	56	1	40	1.754386e-02	coding only	1	28836834	...	16	35	56	5.548459e-07	1.213725e-06	1.941961e-06	-5.711760e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-8296-01A-11D-2340-08	92	89	3	62	3.260870e-02	coding only	1	28836834	...	27	61	89	9.363025e-07	2.115350e-06	3.086330e-06	-5.510558e+00	...	0	28780638	...	0
TCGA-BR-8360-01A-11D-2340-08	664	657	7	465	1.054217e-02	coding only	1	28836834	...	191	414	655	6.623473e-06	1.435664e-05	2.271401e-05	-4.643706e+00	...	49	28780638	...	1.702533e-06
TCGA-BR-8361-01A-11D-2340-08	1692	1673	19	1224	1.122931e-02	coding only	1	28836834	...	447	1078	1659	1.550101e-05	3.738274e-05	5.753059e-05	-4.240101e+00	...	130	28780638	...	4.516926e-06
TCGA-BR-8365-01A-21D-2340-08	27	26	1	21	3.703704e-02	coding only	1	28836834	...	5	19	24	1.733894e-07	6.588795e-07	8.322689e-07	-6.079736e+00	...	0	28780638	...	0
TCGA-BR-8366-01A-11D-2340-08	188	188	0	150	0	coding only	1	28836834	...	38	149	187	1.317759e-06	5.167003e-06	6.484762e-06	-5.188106e+00	...	0	28780638	...	0
TCGA-BR-8367-01A-11D-2340-08	75	72	3	53	4.000000e-02	coding only	1	28836834	...	18	50	70	6.242017e-07	1.733894e-06	2.427451e-06	-5.614850e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8368-01A-11D-2340-08	1095	1087	8	767	7.305936e-03	coding only	1	28836834	...	315	645	1079	1.092353e-05	2.236723e-05	3.741742e-05	-4.426926e+00	...	118	28780638	...	4.099979e-06
TCGA-BR-8370-01A-11D-2340-08	123	121	2	85	1.626016e-02	coding only	1	28836834	...	35	84	119	1.213725e-06	2.912941e-06	4.126667e-06	-5.384401e+00	...	0	28780638	...	0
TCGA-BR-8371-01A-11D-2340-08	23	23	0	15	0	coding only	1	28836834	...	8	14	23	2.774230e-07	4.854902e-07	7.975910e-07	-6.098220e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8372-01A-11D-2340-08	1388	1368	20	995	1.440922e-02	coding only	1	28836834	...	372	874	1365	1.290017e-05	3.030846e-05	4.733529e-05	-4.324815e+00	...	115	28780638	...	3.995742e-06
TCGA-BR-8373-01A-11D-2340-08	111	107	4	68	3.603604e-02	coding only	1	28836834	...	39	64	108	1.352437e-06	2.219384e-06	3.745210e-06	-5.426524e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8381-01A-11D-2394-08	146	141	5	99	3.424658e-02	exome+100bp flanks	2	35874082	...	41	98	140	1.142886e-06	2.731777e-06	3.902539e-06	-5.408653e+00	...	1	32153202	...	3.110110e-08
TCGA-BR-8382-01A-11D-2394-08	938	930	8	656	8.528785e-03	coding only	1	28836834	...	269	641	916	9.328347e-06	2.222852e-05	3.176493e-05	-4.498052e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8384-01A-21D-2394-08	47	46	1	39	2.127660e-02	coding only	1	28836834	...	7	39	46	2.427451e-07	1.352437e-06	1.595182e-06	-5.797190e+00	...	0	28780638	...	0
TCGA-BR-8484-01A-11D-2394-08	104	100	4	65	3.846154e-02	coding only	1	28836834	...	35	63	98	1.213725e-06	2.184706e-06	3.398431e-06	-5.468722e+00	...	0	28780638	...	0
TCGA-BR-8485-01A-11D-2394-08	353	351	2	263	5.665722e-03	coding only	1	28836834	...	88	258	348	3.051653e-06	8.946891e-06	1.206790e-05	-4.918368e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8486-01A-31D-2394-08	61	60	1	47	1.639344e-02	coding only	1	28836834	...	13	46	60	4.508123e-07	1.595182e-06	2.080672e-06	-5.681796e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8588-01A-11D-2394-08	141	140	1	102	7.092199e-03	coding only	1	28836834	...	37	101	138	1.283081e-06	3.502465e-06	4.785546e-06	-5.320068e+00	...	0	28780638	...	0
TCGA-BR-8589-01A-11D-2394-08	1261	1250	11	991	8.723236e-03	coding only	1	28836834	...	258	984	1244	8.946891e-06	3.412302e-05	4.313927e-05	-4.365127e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8590-01A-11D-2394-08	144	143	1	105	6.944444e-03	coding only	1	28836834	...	38	103	143	1.317759e-06	3.571821e-06	4.958936e-06	-5.304612e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8591-01A-11D-2394-08	1539	1524	15	1089	9.746589e-03	coding only	1	28836834	...	434	1027	1513	1.505020e-05	3.561417e-05	5.246762e-05	-4.280109e+00	...	47	28780638	...	1.633042e-06
TCGA-BR-8676-01A-11D-2394-08	95	94	1	72	1.052632e-02	coding only	1	28836834	...	22	69	94	7.629132e-07	2.392773e-06	3.259720e-06	-5.486820e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8677-01A-11D-2394-08	79	79	0	55	0	coding only	1	28836834	...	24	53	79	8.322689e-07	1.837927e-06	2.739552e-06	-5.562320e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8678-01A-11D-2394-08	128	126	2	97	1.562500e-02	coding only	1	28836834	...	29	93	125	1.005658e-06	3.225042e-06	4.334734e-06	-5.363038e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-8679-01A-11D-2394-08	182	179	3	132	1.648352e-02	coding only	1	28836834	...	47	127	177	1.629860e-06	4.404090e-06	6.137983e-06	-5.211974e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-8680-01A-11D-2394-08	6939	6832	107	5336	1.542009e-02	coding only	1	28836834	...	1480	5274	6783	5.132325e-05	1.828911e-04	2.352200e-04	-3.628526e+00	...	11	28780638	...	3.822014e-07
TCGA-BR-8682-01A-11D-2394-08	82	79	3	54	3.658537e-02	coding only	1	28836834	...	25	51	77	8.669468e-07	1.768571e-06	2.670196e-06	-5.573457e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8683-01A-11D-2394-08	171	170	1	127	5.847953e-03	coding only	1	28836834	...	43	122	168	1.491148e-06	4.230700e-06	5.825882e-06	-5.234638e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8687-01A-11D-2394-08	205	202	3	150	1.463415e-02	coding only	1	28836834	...	52	147	201	1.803249e-06	5.097647e-06	6.970252e-06	-5.156752e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8690-01A-11D-2394-08	179	176	3	129	1.675978e-02	coding only	1	28836834	...	47	127	176	1.629860e-06	4.404090e-06	6.103305e-06	-5.214435e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-A4IV-01A-31D-A25D-08	28	27	1	20	3.571429e-02	coding only	1	28836834	...	7	20	27	2.427451e-07	6.935574e-07	9.363025e-07	-6.028584e+00	...	0	28780638	...	0
TCGA-BR-A4IY-01A-11D-A25D-08	153	152	1	116	6.535948e-03	coding only	1	28836834	...	35	113	151	1.213725e-06	3.918599e-06	5.236358e-06	-5.280971e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4IZ-01A-32D-A25D-08	10	10	0	9	0	coding only	1	28836834	...	1	9	10	3.467787e-08	3.121008e-07	3.467787e-07	-6.459948e+00	...	0	28780638	...	0
TCGA-BR-A4J1-01A-11D-A25D-08	82	79	3	57	3.658537e-02	coding only	1	28836834	...	21	55	78	7.282353e-07	1.907283e-06	2.704874e-06	-5.567853e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4J4-01A-12D-A25D-08	90	90	0	72	0	coding only	1	28836834	...	18	71	90	6.242017e-07	2.462129e-06	3.121008e-06	-5.505705e+00	...	0	28780638	...	0
TCGA-BR-A4J6-01A-11D-A25D-08	40	39	1	27	2.500000e-02	coding only	1	28836834	...	11	26	38	3.814566e-07	9.016246e-07	1.317759e-06	-5.880164e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-A4J7-01A-31D-A25D-08	60	58	2	41	3.333333e-02	coding only	1	28836834	...	17	41	58	5.895238e-07	1.421793e-06	2.011316e-06	-5.696520e+00	...	0	28780638	...	0
TCGA-BR-A4J8-01A-11D-A25D-08	117	113	4	70	3.418803e-02	coding only	1	28836834	...	43	66	112	1.491148e-06	2.288739e-06	3.883922e-06	-5.410730e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4QI-01A-12D-A25D-08	153	151	2	110	1.307190e-02	coding only	1	28836834	...	40	106	149	1.387115e-06	3.675854e-06	5.167003e-06	-5.286761e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-A4QL-01A-31D-A25D-08	2088	2067	21	1534	1.005747e-02	coding only	1	28836834	...	530	1247	2060	1.837927e-05	4.324330e-05	7.143641e-05	-4.146080e+00	...	275	28780638	...	9.555035e-06
TCGA-CD-5798-01A-11D-1600-08	103	101	2	76	1.941748e-02	coding only	1	28836834	...	25	76	101	8.669468e-07	2.635518e-06	3.502465e-06	-5.455626e+00	...	0	28780638	...	0
TCGA-CD-5799-01A-11D-1600-08	60	57	3	38	5.000000e-02	coding only	1	28836834	...	19	37	57	6.588795e-07	1.283081e-06	1.976639e-06	-5.704073e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-5800-01A-11D-1600-08	183	181	2	138	1.092896e-02	coding only	1	28836834	...	43	135	180	1.491148e-06	4.681513e-06	6.242017e-06	-5.204675e+00	...	0	28780638	...	0
TCGA-CD-5801-01A-11D-1600-08	612	606	6	467	9.803922e-03	coding only	1	28836834	...	139	464	605	4.820224e-06	1.609053e-05	2.098011e-05	-4.678192e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-5802-01A-11D-1600-08	58	58	0	44	0	coding only	1	28836834	...	14	43	57	4.854902e-07	1.491148e-06	1.976639e-06	-5.704073e+00	...	0	28780638	...	0
TCGA-CD-5803-01A-11D-1600-08	47	47	0	36	0	coding only	1	28836834	...	11	36	47	3.814566e-07	1.248403e-06	1.629860e-06	-5.787850e+00	...	0	28780638	...	0
TCGA-CD-5804-01A-12D-2053-08	98	98	0	75	0	coding only	1	28836834	...	23	68	98	7.975910e-07	2.358095e-06	3.398431e-06	-5.468722e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-5813-01A-11D-1600-08	202	199	3	151	1.485149e-02	coding only	1	28836834	...	47	147	198	1.629860e-06	5.097647e-06	6.866218e-06	-5.163282e+00	...	2	28780638	...	6.949116e-08
TCGA-CD-8524-01A-11D-2340-08	169	167	2	128	1.183432e-02	coding only	1	28836834	...	38	127	166	1.317759e-06	4.404090e-06	5.756527e-06	-5.239839e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-8525-01A-11D-2340-08	90	87	3	67	3.333333e-02	coding only	1	28836834	...	19	65	86	6.588795e-07	2.254062e-06	2.982297e-06	-5.525449e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-8526-01A-11D-2340-08	49	47	2	41	4.081633e-02	coding only	1	28836834	...	6	39	46	2.080672e-07	1.352437e-06	1.595182e-06	-5.797190e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-8528-01A-11D-2340-08	120	119	1	89	8.333333e-03	coding only	1	28836834	...	30	87	119	1.040336e-06	3.016975e-06	4.126667e-06	-5.384401e+00	...	2	28780638	...	6.949116e-08
TCGA-CD-8529-01A-11D-2340-08	442	441	1	331	2.262443e-03	coding only	1	28836834	...	110	327	439	3.814566e-06	1.133966e-05	1.522359e-05	-4.817483e+00	...	2	28780638	...	6.949116e-08
TCGA-CD-8530-01A-11D-2340-08	101	100	1	71	9.900990e-03	coding only	1	28836834	...	29	71	100	1.005658e-06	2.462129e-06	3.467787e-06	-5.459948e+00	...	0	28780638	...	0
TCGA-CD-8531-01A-11D-2340-08	284	265	19	202	6.690141e-02	exome+100bp flanks	2	35874082	...	63	188	261	1.756142e-06	5.240552e-06	7.275447e-06	-5.138140e+00	...	10	32153202	...	3.110110e-07
TCGA-CD-8532-01A-11D-2340-08	52	50	2	31	3.846154e-02	coding only	1	28836834	...	19	29	50	6.588795e-07	1.005658e-06	1.733894e-06	-5.760978e+00	...	2	28780638	...	6.949116e-08
TCGA-CD-8534-01A-11D-2340-08	86	82	4	64	4.651163e-02	coding only	1	28836834	...	18	64	83	6.242017e-07	2.219384e-06	2.878263e-06	-5.540869e+00	...	0	28780638	...	0
TCGA-CD-8535-01A-11D-2340-08	311	306	5	220	1.607717e-02	coding only	1	28836834	...	85	207	301	2.947619e-06	7.178319e-06	1.043804e-05	-4.981381e+00	...	8	28780638	...	2.779647e-07
TCGA-CD-A4MI-01A-21D-A25D-08	1072	1068	4	756	3.731343e-03	coding only	1	28836834	...	309	746	1061	1.071546e-05	2.586969e-05	3.679322e-05	-4.434232e+00	...	4	28780638	...	1.389823e-07
TCGA-CD-A4MJ-01A-11D-A25D-08	717	710	7	529	9.762901e-03	coding only	1	28836834	...	180	455	707	6.242017e-06	1.577843e-05	2.451725e-05	-4.610528e+00	...	71	28780638	...	2.466936e-06
TCGA-CG-4300-01A-01D-1158-08	168	167	1	126	5.952381e-03	coding only	1	28836834	...	40	125	166	1.387115e-06	4.334734e-06	5.756527e-06	-5.239839e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4301-01A-01D-1158-08	61	61	0	46	0	coding only	1	28836834	...	15	45	60	5.201681e-07	1.560504e-06	2.080672e-06	-5.681796e+00	...	0	28780638	...	0
TCGA-CG-4304-01A-01D-1158-08	83	83	0	53	0	coding only	1	28836834	...	30	51	83	1.040336e-06	1.768571e-06	2.878263e-06	-5.540869e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-4305-01A-01D-1158-08	1218	1210	8	853	6.568144e-03	coding only	1	28836834	...	357	843	1208	1.238000e-05	2.923344e-05	4.189087e-05	-4.377881e+00	...	6	28780638	...	2.084735e-07
TCGA-CG-4306-01A-01D-1158-08	1159	1154	5	826	4.314064e-03	coding only	1	28836834	...	326	802	1148	1.130499e-05	2.781165e-05	3.981020e-05	-4.400006e+00	...	17	28780638	...	5.906749e-07
TCGA-CG-4436-01A-01D-1158-08	213	210	3	160	1.408451e-02	coding only	1	28836834	...	50	157	210	1.733894e-06	5.444426e-06	7.282353e-06	-5.137728e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4437-01A-01D-1800-08	590	581	9	443	1.525424e-02	coding only	1	28836834	...	138	438	580	4.785546e-06	1.518891e-05	2.011316e-05	-4.696520e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4438-01A-01D-1158-08	163	159	4	126	2.453988e-02	coding only	1	28836834	...	33	124	158	1.144370e-06	4.300056e-06	5.479104e-06	-5.261290e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4440-01A-01D-1158-08	139	138	1	113	7.194245e-03	coding only	1	28836834	...	25	111	139	8.669468e-07	3.849244e-06	4.820224e-06	-5.316933e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-4441-01A-01D-1800-08	143	138	5	98	3.496503e-02	exome+100bp flanks	2	35874082	...	38	95	135	1.059261e-06	2.648151e-06	3.763162e-06	-5.424447e+00	...	2	32153202	...	6.220220e-08
TCGA-CG-4442-01A-01D-1158-08	1778	1761	17	1280	9.561305e-03	coding only	1	28836834	...	476	1082	1748	1.650667e-05	3.752146e-05	6.061692e-05	-4.217406e+00	...	185	28780638	...	6.427933e-06
TCGA-CG-4443-01A-01D-1158-08	118	113	5	80	4.237288e-02	exome+100bp flanks	2	35874082	...	33	76	113	9.198842e-07	2.118521e-06	3.149906e-06	-5.501702e+00	...	4	32153202	...	1.244044e-07
TCGA-CG-4444-01A-01D-1158-08	212	212	0	151	0	coding only	1	28836834	...	61	149	210	2.115350e-06	5.167003e-06	7.282353e-06	-5.137728e+00	...	0	28780638	...	0
TCGA-CG-4449-01A-01D-1158-08	120	119	1	93	8.333333e-03	coding only	1	28836834	...	26	87	116	9.016246e-07	3.016975e-06	4.022633e-06	-5.395490e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-4455-01A-01D-1158-08	58	57	1	37	1.724138e-02	coding only	1	28836834	...	20	37	57	6.935574e-07	1.283081e-06	1.976639e-06	-5.704073e+00	...	0	28780638	...	0
TCGA-CG-4462-01A-01D-1158-08	90	89	1	60	1.111111e-02	coding only	1	28836834	...	29	59	88	1.005658e-06	2.045994e-06	3.051653e-06	-5.515465e+00	...	0	28780638	...	0
TCGA-CG-4465-01A-01D-1158-08	687	682	5	498	7.278020e-03	coding only	1	28836834	...	181	449	677	6.276695e-06	1.557036e-05	2.347692e-05	-4.629359e+00	...	43	28780638	...	1.494060e-06
TCGA-CG-4466-01A-01D-1158-08	239	232	7	177	2.928870e-02	coding only	1	28836834	...	55	170	230	1.907283e-06	5.895238e-06	7.975910e-06	-5.098220e+00	...	4	28780638	...	1.389823e-07
TCGA-CG-4469-01A-01D-1158-08	364	359	5	282	1.373626e-02	coding only	1	28836834	...	77	268	351	2.670196e-06	9.293669e-06	1.217193e-05	-4.914640e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-4474-01A-02D-1158-08	111	110	1	82	9.009009e-03	coding only	1	28836834	...	28	82	110	9.709804e-07	2.843585e-06	3.814566e-06	-5.418555e+00	...	0	28780638	...	0
TCGA-CG-4475-01A-01D-1158-08	61	59	2	42	3.278689e-02	coding only	1	28836834	...	17	41	59	5.895238e-07	1.421793e-06	2.045994e-06	-5.689096e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4476-01A-01D-1158-08	148	147	1	121	6.756757e-03	coding only	1	28836834	...	26	121	147	9.016246e-07	4.196022e-06	5.097647e-06	-5.292630e+00	...	0	28780638	...	0
TCGA-CG-4477-01A-01D-1158-08	78	76	2	55	2.564103e-02	coding only	1	28836834	...	21	50	75	7.282353e-07	1.733894e-06	2.600840e-06	-5.584886e+00	...	4	28780638	...	1.389823e-07
TCGA-CG-5717-01A-11D-1600-08	206	202	4	150	1.941748e-02	coding only	1	28836834	...	52	149	202	1.803249e-06	5.167003e-06	7.004930e-06	-5.154596e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-5718-01A-11D-1600-08	105	103	2	79	1.904762e-02	coding only	1	28836834	...	24	76	102	8.322689e-07	2.635518e-06	3.537143e-06	-5.451347e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-5719-01A-11D-1600-08	111	108	3	78	2.702703e-02	coding only	1	28836834	...	30	78	108	1.040336e-06	2.704874e-06	3.745210e-06	-5.426524e+00	...	0	28780638	...	0
TCGA-CG-5720-01A-11D-1600-08	115	114	1	82	8.695652e-03	coding only	1	28836834	...	32	81	114	1.109692e-06	2.808908e-06	3.953277e-06	-5.403043e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-5721-01A-11D-1600-08	4730	4680	50	3372	1.057082e-02	coding only	1	28836834	...	1303	3322	4664	4.518527e-05	1.151999e-04	1.617376e-04	-3.791189e+00	...	29	28780638	...	1.007622e-06
TCGA-CG-5722-01A-21D-1600-08	105	104	1	75	9.523810e-03	coding only	1	28836834	...	29	74	103	1.005658e-06	2.566162e-06	3.571821e-06	-5.447110e+00	...	0	28780638	...	0
TCGA-CG-5723-01A-11D-1600-08	1783	1767	16	1267	8.973640e-03	coding only	1	28836834	...	498	1227	1760	1.726958e-05	4.254975e-05	6.103305e-05	-4.214435e+00	...	31	28780638	...	1.077113e-06
TCGA-CG-5724-01A-11D-1600-08	138	136	2	104	1.449275e-02	coding only	1	28836834	...	32	99	135	1.109692e-06	3.433109e-06	4.681513e-06	-5.329614e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-5726-01A-11D-1600-08	1578	1564	14	1126	8.871990e-03	coding only	1	28836834	...	434	962	1552	1.505020e-05	3.336011e-05	5.382006e-05	-4.269056e+00	...	154	28780638	...	5.350820e-06
TCGA-CG-5727-01A-11D-1600-08	183	181	2	127	1.092896e-02	coding only	1	28836834	...	54	126	181	1.872605e-06	4.369412e-06	6.276695e-06	-5.202269e+00	...	0	28780638	...	0
TCGA-CG-5728-01A-11D-1600-08	1449	1434	15	998	1.035197e-02	coding only	1	28836834	...	433	987	1431	1.501552e-05	3.422706e-05	4.962403e-05	-4.304308e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-5730-01A-11D-1600-08	202	197	5	136	2.475248e-02	coding only	1	28836834	...	61	133	197	2.115350e-06	4.612157e-06	6.831541e-06	-5.165481e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-5732-01A-11D-1600-08	82	82	0	58	0	coding only	1	28836834	...	24	57	82	8.322689e-07	1.976639e-06	2.843585e-06	-5.546134e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-5733-01A-11D-1600-08	1242	1232	10	882	8.051530e-03	coding only	1	28836834	...	350	824	1223	1.213725e-05	2.857457e-05	4.241104e-05	-4.372521e+00	...	46	28780638	...	1.598297e-06
TCGA-CG-5734-01A-11D-1600-08	126	123	3	94	2.380952e-02	coding only	1	28836834	...	28	93	121	9.709804e-07	3.225042e-06	4.196022e-06	-5.377162e+00	...	0	28780638	...	0
TCGA-D7-5577-01A-01D-1600-08	137	136	1	107	7.299270e-03	coding only	1	28836834	...	29	106	136	1.005658e-06	3.675854e-06	4.716190e-06	-5.326409e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-5578-01A-01D-1600-08	299	293	6	209	2.006689e-02	coding only	1	28836834	...	83	204	289	2.878263e-06	7.074286e-06	1.002190e-05	-4.999050e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-5579-01A-01D-1600-08	177	175	2	131	1.129944e-02	coding only	1	28836834	...	41	129	171	1.421793e-06	4.473445e-06	5.929916e-06	-5.226951e+00	...	0	28780638	...	0
TCGA-D7-6518-01A-11D-1800-08	115	114	1	81	8.695652e-03	coding only	1	28836834	...	33	80	113	1.144370e-06	2.774230e-06	3.918599e-06	-5.406869e+00	...	0	28780638	...	0
TCGA-D7-6519-01A-11D-1800-08	64	64	0	50	0	coding only	1	28836834	...	14	46	64	4.854902e-07	1.595182e-06	2.219384e-06	-5.653768e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-6520-01A-11D-1800-08	74	74	0	53	0	coding only	1	28836834	...	19	51	72	6.588795e-07	1.768571e-06	2.496807e-06	-5.602615e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-6521-01A-11D-1800-08	98	97	1	76	1.020408e-02	coding only	1	28836834	...	21	75	97	7.282353e-07	2.600840e-06	3.363753e-06	-5.473176e+00	...	0	28780638	...	0
TCGA-D7-6522-01A-11D-1800-08	90	86	4	62	4.444444e-02	coding only	1	28836834	...	23	62	85	7.975910e-07	2.150028e-06	2.947619e-06	-5.530529e+00	...	0	28780638	...	0
TCGA-D7-6524-01A-11D-1800-08	124	123	1	92	8.064516e-03	coding only	1	28836834	...	31	91	123	1.075014e-06	3.155686e-06	4.265378e-06	-5.370042e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-6525-01A-11D-1800-08	197	191	6	136	3.045685e-02	exome+100bp flanks	2	35874082	...	53	131	189	1.477390e-06	3.651661e-06	5.268427e-06	-5.278319e+00	...	5	32153202	...	1.555055e-07
TCGA-D7-6526-01A-11D-1800-08	253	250	3	179	1.185771e-02	coding only	1	28836834	...	70	177	248	2.427451e-06	6.137983e-06	8.600112e-06	-5.065496e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-6527-01A-11D-1800-08	262	257	5	198	1.908397e-02	coding only	1	28836834	...	59	197	257	2.045994e-06	6.831541e-06	8.912213e-06	-5.050014e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-6528-01A-11D-1800-08	400	395	5	303	1.250000e-02	coding only	1	28836834	...	91	298	393	3.155686e-06	1.033401e-05	1.362840e-05	-4.865555e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-6815-01A-11D-1882-08	174	170	4	117	2.298851e-02	coding only	1	28836834	...	51	109	166	1.768571e-06	3.779888e-06	5.756527e-06	-5.239839e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-6817-01A-11D-1882-08	109	106	3	82	2.752294e-02	coding only	1	28836834	...	23	81	105	7.975910e-07	2.808908e-06	3.641176e-06	-5.438758e+00	...	0	28780638	...	0
TCGA-D7-6818-01A-11D-1882-08	181	175	6	145	3.314917e-02	exome+100bp flanks	2	35874082	...	30	142	174	8.362583e-07	3.958289e-06	4.850298e-06	-5.314232e+00	...	2	32153202	...	6.220220e-08
TCGA-D7-6820-01A-11D-1882-08	115	114	1	81	8.695652e-03	coding only	1	28836834	...	33	79	113	1.144370e-06	2.739552e-06	3.918599e-06	-5.406869e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-6822-01A-11D-1882-08	287	280	7	229	2.439024e-02	coding only	1	28836834	...	51	221	278	1.768571e-06	7.663809e-06	9.640448e-06	-5.015903e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-8570-01A-11D-2340-08	138	134	4	98	2.898551e-02	coding only	1	28836834	...	35	97	132	1.213725e-06	3.363753e-06	4.577479e-06	-5.339374e+00	...	0	28780638	...	0
TCGA-D7-8572-01A-11D-2340-08	196	196	0	146	0	coding only	1	28836834	...	50	145	195	1.733894e-06	5.028291e-06	6.762185e-06	-5.169913e+00	...	0	28780638	...	0
TCGA-D7-8573-01A-11D-2340-08	96	95	1	68	1.041667e-02	coding only	1	28836834	...	25	67	93	8.669468e-07	2.323417e-06	3.225042e-06	-5.491465e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-8574-01A-13D-2340-08	37	35	2	22	5.405405e-02	coding only	1	28836834	...	12	22	34	4.161344e-07	7.629132e-07	1.179048e-06	-5.928469e+00	...	0	28780638	...	0
TCGA-D7-8576-01A-11D-2340-08	69	69	0	49	0	coding only	1	28836834	...	19	45	67	6.588795e-07	1.560504e-06	2.323417e-06	-5.633873e+00	...	3	28780638	...	1.042367e-07
TCGA-D7-A4YT-01A-11D-A25D-08	322	319	3	228	9.316770e-03	coding only	1	28836834	...	91	217	316	3.155686e-06	7.525098e-06	1.095821e-05	-4.960260e+00	...	7	28780638	...	2.432191e-07
TCGA-D7-A4YU-01A-21D-A25D-08	268	262	6	214	2.238806e-02	coding only	1	28836834	...	48	207	259	1.664538e-06	7.178319e-06	8.981569e-06	-5.046648e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-A4YV-01A-11D-A25D-08	943	936	7	673	7.423118e-03	coding only	1	28836834	...	261	648	932	9.050924e-06	2.247126e-05	3.231978e-05	-4.490532e+00	...	21	28780638	...	7.296572e-07
TCGA-D7-A4Z0-01A-22D-A25D-08	341	337	4	266	1.173021e-02	coding only	1	28836834	...	69	262	332	2.392773e-06	9.085602e-06	1.151305e-05	-4.938809e+00	...	0	28780638	...	0
TCGA-EQ-5647-01A-01D-1600-08	107	106	1	75	9.345794e-03	coding only	1	28836834	...	31	75	106	1.075014e-06	2.600840e-06	3.675854e-06	-5.434642e+00	...	0	28780638	...	0
TCGA-F1-6177-01A-11D-1800-08	1492	1478	14	1082	9.383378e-03	coding only	1	28836834	...	395	882	1469	1.369776e-05	3.058588e-05	5.094179e-05	-4.292926e+00	...	185	28780638	...	6.427933e-06
TCGA-F1-6874-01A-11D-1882-08	968	958	10	681	1.033058e-02	coding only	1	28836834	...	272	631	948	9.432381e-06	2.188174e-05	3.287462e-05	-4.483139e+00	...	44	28780638	...	1.528806e-06
TCGA-F1-6875-01A-11D-2053-08	118	115	3	85	2.542373e-02	coding only	1	28836834	...	29	82	111	1.005658e-06	2.843585e-06	3.849244e-06	-5.414625e+00	...	0	28780638	...	0
TCGA-FP-7735-01A-11D-2053-08	76	75	1	57	1.315789e-02	coding only	1	28836834	...	18	51	75	6.242017e-07	1.768571e-06	2.600840e-06	-5.584886e+00	...	6	28780638	...	2.084735e-07
TCGA-FP-7829-01A-11D-2053-08	284	281	3	205	1.056338e-02	coding only	1	28836834	...	75	196	280	2.600840e-06	6.796863e-06	9.709804e-06	-5.012790e+00	...	4	28780638	...	1.389823e-07
TCGA-FP-7916-01A-11D-2201-08	127	122	5	89	3.937008e-02	exome+100bp flanks	2	35874082	...	33	86	121	9.198842e-07	2.397274e-06	3.372909e-06	-5.471995e+00	...	2	32153202	...	6.220220e-08
TCGA-FP-7998-01A-11D-2201-08	83	83	0	63	0	coding only	1	28836834	...	20	61	81	6.935574e-07	2.115350e-06	2.808908e-06	-5.551463e+00	...	0	28780638	...	0
TCGA-FP-8099-01A-11D-2340-08	155	153	2	107	1.290323e-02	coding only	1	28836834	...	46	104	152	1.595182e-06	3.606499e-06	5.271036e-06	-5.278104e+00	...	2	28780638	...	6.949116e-08
TCGA-FP-8209-01A-11D-2340-08	2	2	0	1	0	coding only	1	28836834	...	1	1	2	3.467787e-08	3.467787e-08	6.935574e-08	-7.158918e+00	...	0	28780638	...	0
TCGA-HF-7132-01A-11D-2053-08	1335	1326	9	934	6.741573e-03	coding only	1	28836834	...	390	904	1316	1.352437e-05	3.134880e-05	4.563608e-05	-4.340692e+00	...	20	28780638	...	6.949116e-07
TCGA-HF-7133-01A-11D-2053-08	91	88	3	69	3.296703e-02	coding only	1	28836834	...	19	66	86	6.588795e-07	2.288739e-06	2.982297e-06	-5.525449e+00	...	1	28780638	...	3.474558e-08
TCGA-HF-7136-01A-11D-2053-08	98	96	2	74	2.040816e-02	coding only	1	28836834	...	22	67	94	7.629132e-07	2.323417e-06	3.259720e-06	-5.486820e+00	...	5	28780638	...	1.737279e-07
TCGA-HJ-7597-01A-21D-2201-08	875	870	5	604	5.714286e-03	coding only	1	28836834	...	266	550	868	9.224314e-06	1.907283e-05	3.010039e-05	-4.521428e+00	...	51	28780638	...	1.772025e-06
TCGA-HU-8243-01A-11D-2340-08	138	136	2	99	1.449275e-02	coding only	1	28836834	...	37	94	135	1.283081e-06	3.259720e-06	4.681513e-06	-5.329614e+00	...	4	28780638	...	1.389823e-07
TCGA-HU-8245-01A-11D-2340-08	71	70	1	54	1.408451e-02	coding only	1	28836834	...	16	51	69	5.548459e-07	1.768571e-06	2.392773e-06	-5.621098e+00	...	2	28780638	...	6.949116e-08
TCGA-HU-8604-01A-11D-2394-08	236	235	1	170	4.237288e-03	coding only	1	28836834	...	65	169	235	2.254062e-06	5.860560e-06	8.149300e-06	-5.088880e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-8610-01A-22D-2394-08	72	69	3	55	4.166667e-02	coding only	1	28836834	...	14	54	68	4.854902e-07	1.872605e-06	2.358095e-06	-5.627439e+00	...	0	28780638	...	0
TCGA-HU-A4G2-01A-11D-A25D-08	58	55	3	38	5.172414e-02	coding only	1	28836834	...	17	36	55	5.895238e-07	1.248403e-06	1.907283e-06	-5.719585e+00	...	2	28780638	...	6.949116e-08
TCGA-HU-A4GD-01A-11D-A25D-08	101	97	4	72	3.960396e-02	coding only	1	28836834	...	25	70	97	8.669468e-07	2.427451e-06	3.363753e-06	-5.473176e+00	...	2	28780638	...	6.949116e-08
TCGA-HU-A4GN-01A-11D-A25D-08	1279	1264	15	887	1.172791e-02	coding only	1	28836834	...	374	870	1255	1.296952e-05	3.016975e-05	4.352073e-05	-4.361304e+00	...	9	28780638	...	3.127102e-07
TCGA-HU-A4GP-01A-11D-A25D-08	214	212	2	147	9.345794e-03	coding only	1	28836834	...	63	140	209	2.184706e-06	4.854902e-06	7.247675e-06	-5.139801e+00	...	4	28780638	...	1.389823e-07
TCGA-HU-A4GQ-01A-11D-A25D-08	1959	1935	24	1375	1.225115e-02	coding only	1	28836834	...	559	1296	1926	1.938493e-05	4.494252e-05	6.678958e-05	-4.175291e+00	...	66	28780638	...	2.293208e-06
TCGA-HU-A4GU-01A-11D-A25D-08	1659	1647	12	1172	7.233273e-03	coding only	1	28836834	...	475	1098	1632	1.647199e-05	3.807630e-05	5.659428e-05	-4.247227e+00	...	53	28780638	...	1.841516e-06
TCGA-HU-A4H3-01A-21D-A25D-08	1003	989	14	723	1.395813e-02	coding only	1	28836834	...	264	612	981	9.154958e-06	2.122286e-05	3.401899e-05	-4.468279e+00	...	102	28780638	...	3.544049e-06
TCGA-HU-A4H4-01A-21D-A25D-08	773	767	6	551	7.761966e-03	coding only	1	28836834	...	214	546	763	7.421064e-06	1.893412e-05	2.645922e-05	-4.577423e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-A4H5-01A-21D-A25D-08	297	293	4	232	1.346801e-02	coding only	1	28836834	...	61	225	290	2.115350e-06	7.802521e-06	1.005658e-05	-4.997550e+00	...	4	28780638	...	1.389823e-07
TCGA-HU-A4H6-01A-11D-A25D-08	111	109	2	78	1.801802e-02	coding only	1	28836834	...	31	75	107	1.075014e-06	2.600840e-06	3.710532e-06	-5.430564e+00	...	0	28780638	...	0
TCGA-IN-7806-01A-11D-2053-08	86	86	0	66	0	coding only	1	28836834	...	20	63	85	6.935574e-07	2.184706e-06	2.947619e-06	-5.530529e+00	...	2	28780638	...	6.949116e-08
TCGA-IN-7808-01A-11D-2201-08	124	124	0	95	0	coding only	1	28836834	...	29	94	124	1.005658e-06	3.259720e-06	4.300056e-06	-5.366526e+00	...	1	28780638	...	3.474558e-08
TCGA-IN-8462-01A-11D-2340-08	135	133	2	99	1.481481e-02	coding only	1	28836834	...	34	96	133	1.179048e-06	3.329076e-06	4.612157e-06	-5.336096e+00	...	3	28780638	...	1.042367e-07
TCGA-IN-8663-01A-11D-2394-08	198	197	1	148	5.050505e-03	coding only	1	28836834	...	49	140	193	1.699216e-06	4.854902e-06	6.692829e-06	-5.174390e+00	...	3	28780638	...	1.042367e-07
TCGA-IP-7968-01A-11D-2201-08	129	126	3	98	2.325581e-02	coding only	1	28836834	...	28	95	126	9.709804e-07	3.294398e-06	4.369412e-06	-5.359577e+00	...	3	28780638	...	1.042367e-07
