[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"       "-oTUCS-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/UCS-TP/11588590/UCS-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/UCS-TP/11544838/transformed.cor.cli.txt"

nPatients in clinical file=57, in cluster file=56, common to both=56
[1] 61 56
[1] "AMP PEAK  1(1Q22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE 
                         42                          14 
  AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE 
                         42                          14 
[1] "AMP PEAK  2(2P14) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE 
                         28                          28 
  AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE 
                         28                          28 
[1] "AMP PEAK  3(2Q13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE 
                         29                          27 
  AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE 
                         29                          27 
[1] "AMP PEAK  4(3P25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE 
                           20                            36 
  AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE 
                           20                            36 
[1] "AMP PEAK  5(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE 
                           37                            19 
  AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE 
                           37                            19 
[1] "AMP PEAK  6(4P16.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           25                            31 
  AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE 
                           25                            31 
[1] "AMP PEAK  7(5P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE 
                           26                            30 
  AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE 
                           26                            30 
[1] "AMP PEAK  8(6P24.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE 
                           37                            19 
  AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE 
                           37                            19 
[1] "AMP PEAK  9(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE 
                            33                             23 
  AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE 
                            33                             23 
[1] "AMP PEAK 10(8Q11.23) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE 
                            38                             18 
  AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE 
                            38                             18 
[1] "AMP PEAK 11(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE 
                            42                             14 
  AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE 
                            42                             14 
[1] "AMP PEAK 12(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                            40                             16 
  AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE 
                            40                             16 
[1] "AMP PEAK 13(10Q22.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE 
                            26                             30 
  AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE 
                            26                             30 
[1] "AMP PEAK 14(11Q13.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE 
                            19                             37 
  AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE 
                            19                             37 
[1] "AMP PEAK 15(12Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE 
                          22                           34 
  AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE 
                          22                           34 
[1] "AMP PEAK 16(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE 
                          17                           39 
  AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE 
                          17                           39 
[1] "AMP PEAK 17(13Q31.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE 
                            25                             31 
  AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE 
                            25                             31 
[1] "AMP PEAK 18(16P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE 
                            20                             36 
  AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE 
                            20                             36 
[1] "AMP PEAK 19(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE 
                          27                           29 
  AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE 
                          27                           29 
[1] "AMP PEAK 20(17Q25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE 
                            32                             24 
  AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE 
                            32                             24 
[1] "AMP PEAK 21(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            19                             37 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            19                             37 
[1] "AMP PEAK 22(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE 
                          45                           11 
  AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE 
                          45                           11 
[1] "AMP PEAK 23(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE 
                             48                               8 
  AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE 
                             48                               8 
[1] "AMP PEAK 24(20Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE 
                             48                               8 
  AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE 
                             48                               8 
[1] "AMP PEAK 25(XP11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE 
                            28                             28 
  AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE 
                            28                             28 
[1] "DEL PEAK  1(1P36.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE 
                            19                             37 
  DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE 
                            19                             37 
[1] "DEL PEAK  2(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE 
                           11                            45 
  DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE 
                           11                            45 
[1] "DEL PEAK  3(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE 
                           37                            19 
  DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE 
                           37                            19 
[1] "DEL PEAK  4(3Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE 
                            22                             34 
  DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE 
                            22                             34 
[1] "DEL PEAK  5(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           37                            19 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           37                            19 
[1] "DEL PEAK  6(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           37                            19 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           37                            19 
[1] "DEL PEAK  7(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE 
                           26                            30 
  DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE 
                           26                            30 
[1] "DEL PEAK  8(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE 
                         10                          46 
  DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE 
                         10                          46 
[1] "DEL PEAK  9(7Q11.22) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE 
                            12                             44 
  DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE 
                            12                             44 
[1] "DEL PEAK 10(7Q36.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE 
                           20                            36 
  DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE 
                           20                            36 
[1] "DEL PEAK 11(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE 
                           33                            23 
  DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE 
                           33                            23 
[1] "DEL PEAK 12(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE 
                         34                          22 
  DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE 
                         34                          22 
[1] "DEL PEAK 13(9Q21.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE 
                            39                             17 
  DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE 
                            39                             17 
[1] "DEL PEAK 14(9Q33.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE 
                           39                            17 
  DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE 
                           39                            17 
[1] "DEL PEAK 15(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE 
                             20                              36 
  DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE 
                             20                              36 
[1] "DEL PEAK 16(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE 
                            25                             31 
  DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE 
                            25                             31 
[1] "DEL PEAK 17(11Q14.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE 
                            26                             30 
  DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE 
                            26                             30 
[1] "DEL PEAK 18(11Q23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE 
                            26                             30 
  DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE 
                            26                             30 
[1] "DEL PEAK 19(12Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE 
                            20                             36 
  DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE 
                            20                             36 
[1] "DEL PEAK 20(12Q24.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE 
                             20                              36 
  DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE 
                             20                              36 
[1] "DEL PEAK 21(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE 
                             30                              26 
  DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE 
                             30                              26 
[1] "DEL PEAK 22(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE 
                            32                             24 
  DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE 
                            32                             24 
[1] "DEL PEAK 23(14Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE 
                            28                             28 
  DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE 
                            28                             28 
[1] "DEL PEAK 24(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE 
                            41                             15 
  DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE 
                            41                             15 
[1] "DEL PEAK 25(15Q15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                            43                             13 
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                            43                             13 
[1] "DEL PEAK 26(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE 
                            33                             23 
  DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE 
                            33                             23 
[1] "DEL PEAK 27(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE 
                            39                             17 
  DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE 
                            39                             17 
[1] "DEL PEAK 28(17P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE 
                            42                             14 
  DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE 
                            42                             14 
[1] "DEL PEAK 29(17Q21.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE 
                             19                              37 
  DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE 
                             19                              37 
[1] "DEL PEAK 30(18Q22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE 
                            26                             30 
  DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE 
                            26                             30 
[1] "DEL PEAK 31(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE 
                            47                              9 
  DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE 
                            47                              9 
[1] "DEL PEAK 32(19Q13.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE 
                             17                              39 
  DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE 
                             17                              39 
[1] "DEL PEAK 33(20P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE 
                             9                             47 
  DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE 
                             9                             47 
[1] "DEL PEAK 34(22Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE 
                             40                              16 
  DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE 
                             40                              16 
[1] "DEL PEAK 35(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE 
                           18                            38 
  DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE 
                           18                            38 
[1] "DEL PEAK 36(XQ25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE 
                         23                          33 
  DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE 
                         23                          33 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 56 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 56 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=7, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1Q22) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q22) MUTATED       14     17     11
  AMP PEAK  1(1Q22) WILD-TYPE      4      4      6
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                        14                           4
  CLUS_2                        17                           4
  CLUS_3                        11                           6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1Q22) MUTATED        6      8      7     12      9
  AMP PEAK  1(1Q22) WILD-TYPE      5      1      3      1      4
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                         6                           5
  CLUS_2                         8                           1
  CLUS_3                         7                           3
  CLUS_4                        12                           1
  CLUS_5                         9                           4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q22) MUTATED        9     17      8      8
  AMP PEAK  1(1Q22) WILD-TYPE      5      3      4      2
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                         9                           5
  CLUS_2                        17                           3
  CLUS_3                         8                           4
  CLUS_4                         8                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  1(1Q22) MUTATED        5      3      6      4      7      4     13
  AMP PEAK  1(1Q22) WILD-TYPE      5      1      2      2      1      2      1
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                         5                           5
  CLUS_2                         3                           1
  CLUS_3                         6                           2
  CLUS_4                         4                           2
  CLUS_5                         7                           1
  CLUS_6                         4                           2
  CLUS_7                        13                           1
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q22) MUTATED        7     14      4     17
  AMP PEAK  1(1Q22) WILD-TYPE      3      8      0      2
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                         7                           3
  CLUS_2                        14                           8
  CLUS_3                         4                           0
  CLUS_4                        17                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q22) MUTATED       20      4     13      5
  AMP PEAK  1(1Q22) WILD-TYPE      3      4      5      1
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                        20                           3
  CLUS_2                         4                           4
  CLUS_3                        13                           5
  CLUS_4                         5                           1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1Q22) MUTATED       10     15     17
  AMP PEAK  1(1Q22) WILD-TYPE      2      8      3
D1V7, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                        10                           2
  CLUS_2                        15                           8
  CLUS_3                        17                           3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1Q22) MUTATED       21      4     12      5
  AMP PEAK  1(1Q22) WILD-TYPE      3      3      5      2
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q22) MUTATED AMP PEAK  1(1Q22) WILD-TYPE
  CLUS_1                        21                           3
  CLUS_2                         4                           3
  CLUS_3                        12                           5
  CLUS_4                         5                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(2P14) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P14) MUTATED       11      9      8
  AMP PEAK  2(2P14) WILD-TYPE      7     12      9
D2V1, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                        11                           7
  CLUS_2                         9                          12
  CLUS_3                         8                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(2P14) MUTATED        8      2      4      4     10
  AMP PEAK  2(2P14) WILD-TYPE      3      7      6      9      3
D2V2, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         8                           3
  CLUS_2                         2                           7
  CLUS_3                         4                           6
  CLUS_4                         4                           9
  CLUS_5                        10                           3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P14) MUTATED        9      5     10      4
  AMP PEAK  2(2P14) WILD-TYPE      5     15      2      6
D2V3, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         9                           5
  CLUS_2                         5                          15
  CLUS_3                        10                           2
  CLUS_4                         4                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  2(2P14) MUTATED        7      1      3      5      2      5      5
  AMP PEAK  2(2P14) WILD-TYPE      3      3      5      1      6      1      9
D2V4, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         7                           3
  CLUS_2                         1                           3
  CLUS_3                         3                           5
  CLUS_4                         5                           1
  CLUS_5                         2                           6
  CLUS_6                         5                           1
  CLUS_7                         5                           9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P14) MUTATED        6     13      1      8
  AMP PEAK  2(2P14) WILD-TYPE      4      9      3     11
D2V5, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         6                           4
  CLUS_2                        13                           9
  CLUS_3                         1                           3
  CLUS_4                         8                          11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P14) MUTATED        8      5     11      4
  AMP PEAK  2(2P14) WILD-TYPE     15      3      7      2
D2V6, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         8                          15
  CLUS_2                         5                           3
  CLUS_3                        11                           7
  CLUS_4                         4                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(2P14) MUTATED        7     14      7
  AMP PEAK  2(2P14) WILD-TYPE      5      9     13
D2V7, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         7                           5
  CLUS_2                        14                           9
  CLUS_3                         7                          13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(2P14) MUTATED        9      4     11      4
  AMP PEAK  2(2P14) WILD-TYPE     15      3      6      3
D2V8, multiclass
        clus
vv       AMP PEAK  2(2P14) MUTATED AMP PEAK  2(2P14) WILD-TYPE
  CLUS_1                         9                          15
  CLUS_2                         4                           3
  CLUS_3                        11                           6
  CLUS_4                         4                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(2Q13) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q13) MUTATED       11     11      7
  AMP PEAK  3(2Q13) WILD-TYPE      7     10     10
D3V1, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                        11                           7
  CLUS_2                        11                          10
  CLUS_3                         7                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(2Q13) MUTATED        8      1      5      5     10
  AMP PEAK  3(2Q13) WILD-TYPE      3      8      5      8      3
D3V2, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                         8                           3
  CLUS_2                         1                           8
  CLUS_3                         5                           5
  CLUS_4                         5                           8
  CLUS_5                        10                           3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q13) MUTATED        8      8     10      3
  AMP PEAK  3(2Q13) WILD-TYPE      6     12      2      7
D3V3, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                         8                           6
  CLUS_2                         8                          12
  CLUS_3                        10                           2
  CLUS_4                         3                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK  3(2Q13) MUTATED        6      1      5      4      2      5      6
  AMP PEAK  3(2Q13) WILD-TYPE      4      3      3      2      6      1      8
D3V4, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                         6                           4
  CLUS_2                         1                           3
  CLUS_3                         5                           3
  CLUS_4                         4                           2
  CLUS_5                         2                           6
  CLUS_6                         5                           1
  CLUS_7                         6                           8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q13) MUTATED        5     12      2     10
  AMP PEAK  3(2Q13) WILD-TYPE      5     10      2      9
D3V5, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                         5                           5
  CLUS_2                        12                          10
  CLUS_3                         2                           2
  CLUS_4                        10                           9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q13) MUTATED       10      5     10      4
  AMP PEAK  3(2Q13) WILD-TYPE     13      3      8      2
D3V6, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                        10                          13
  CLUS_2                         5                           3
  CLUS_3                        10                           8
  CLUS_4                         4                           2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(2Q13) MUTATED        5     13     11
  AMP PEAK  3(2Q13) WILD-TYPE      7     10      9
D3V7, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                         5                           7
  CLUS_2                        13                          10
  CLUS_3                        11                           9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(2Q13) MUTATED       11      5      9      4
  AMP PEAK  3(2Q13) WILD-TYPE     13      2      8      3
D3V8, multiclass
        clus
vv       AMP PEAK  3(2Q13) MUTATED AMP PEAK  3(2Q13) WILD-TYPE
  CLUS_1                        11                          13
  CLUS_2                         5                           2
  CLUS_3                         9                           8
  CLUS_4                         4                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(3P25.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.1) MUTATED        5      4     11
  AMP PEAK  4(3P25.1) WILD-TYPE     13     17      6
D4V1, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           5                            13
  CLUS_2                           4                            17
  CLUS_3                          11                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(3P25.1) MUTATED        6      2      2      5      5
  AMP PEAK  4(3P25.1) WILD-TYPE      5      7      8      8      8
D4V2, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           6                             5
  CLUS_2                           2                             7
  CLUS_3                           2                             8
  CLUS_4                           5                             8
  CLUS_5                           5                             8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.1) MUTATED        7      4      5      4
  AMP PEAK  4(3P25.1) WILD-TYPE      7     16      7      6
D4V3, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           7                             7
  CLUS_2                           4                            16
  CLUS_3                           5                             7
  CLUS_4                           4                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  4(3P25.1) MUTATED        7      0      1      1      3      3
  AMP PEAK  4(3P25.1) WILD-TYPE      3      4      7      5      5      3
                               vv
clus                            CLUS_7
  AMP PEAK  4(3P25.1) MUTATED        5
  AMP PEAK  4(3P25.1) WILD-TYPE      9
D4V4, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                           0                             4
  CLUS_3                           1                             7
  CLUS_4                           1                             5
  CLUS_5                           3                             5
  CLUS_6                           3                             3
  CLUS_7                           5                             9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.1) MUTATED        3     11      2      4
  AMP PEAK  4(3P25.1) WILD-TYPE      7     11      2     15
D4V5, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           3                             7
  CLUS_2                          11                            11
  CLUS_3                           2                             2
  CLUS_4                           4                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.1) MUTATED        5      6      7      2
  AMP PEAK  4(3P25.1) WILD-TYPE     18      2     11      4
D4V6, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                           6                             2
  CLUS_3                           7                            11
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(3P25.1) MUTATED        3     12      5
  AMP PEAK  4(3P25.1) WILD-TYPE      9     11     15
D4V7, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           3                             9
  CLUS_2                          12                            11
  CLUS_3                           5                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(3P25.1) MUTATED        5      5      8      2
  AMP PEAK  4(3P25.1) WILD-TYPE     19      2      9      5
D4V8, multiclass
        clus
vv       AMP PEAK  4(3P25.1) MUTATED AMP PEAK  4(3P25.1) WILD-TYPE
  CLUS_1                           5                            19
  CLUS_2                           5                             2
  CLUS_3                           8                             9
  CLUS_4                           2                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.2) MUTATED       17     11      9
  AMP PEAK  5(3Q26.2) WILD-TYPE      1     10      8
D5V1, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          17                             1
  CLUS_2                          11                            10
  CLUS_3                           9                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(3Q26.2) MUTATED       11      5      4     11      6
  AMP PEAK  5(3Q26.2) WILD-TYPE      0      4      6      2      7
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          11                             0
  CLUS_2                           5                             4
  CLUS_3                           4                             6
  CLUS_4                          11                             2
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.2) MUTATED       13     11      7      6
  AMP PEAK  5(3Q26.2) WILD-TYPE      1      9      5      4
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          13                             1
  CLUS_2                          11                             9
  CLUS_3                           7                             5
  CLUS_4                           6                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  5(3Q26.2) MUTATED        9      4      3      4      4      3
  AMP PEAK  5(3Q26.2) WILD-TYPE      1      0      5      2      4      3
                               vv
clus                            CLUS_7
  AMP PEAK  5(3Q26.2) MUTATED       10
  AMP PEAK  5(3Q26.2) WILD-TYPE      4
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                           4                             0
  CLUS_3                           3                             5
  CLUS_4                           4                             2
  CLUS_5                           4                             4
  CLUS_6                           3                             3
  CLUS_7                          10                             4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.2) MUTATED        9     14      2     12
  AMP PEAK  5(3Q26.2) WILD-TYPE      1      8      2      7
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                          14                             8
  CLUS_3                           2                             2
  CLUS_4                          12                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.2) MUTATED       16      7      9      5
  AMP PEAK  5(3Q26.2) WILD-TYPE      7      1      9      1
D5V6, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          16                             7
  CLUS_2                           7                             1
  CLUS_3                           9                             9
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(3Q26.2) MUTATED       10     15     12
  AMP PEAK  5(3Q26.2) WILD-TYPE      2      8      8
D5V7, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          10                             2
  CLUS_2                          15                             8
  CLUS_3                          12                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(3Q26.2) MUTATED       16      7      9      5
  AMP PEAK  5(3Q26.2) WILD-TYPE      8      0      8      2
D5V8, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) MUTATED AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                          16                             8
  CLUS_2                           7                             0
  CLUS_3                           9                             8
  CLUS_4                           5                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED       12      5      8
  AMP PEAK  6(4P16.3) WILD-TYPE      6     16      9
D6V1, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                          12                             6
  CLUS_2                           5                            16
  CLUS_3                           8                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(4P16.3) MUTATED        7      4      1      7      6
  AMP PEAK  6(4P16.3) WILD-TYPE      4      5      9      6      7
D6V2, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           4                             5
  CLUS_3                           1                             9
  CLUS_4                           7                             6
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED        8      7      4      6
  AMP PEAK  6(4P16.3) WILD-TYPE      6     13      8      4
D6V3, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           8                             6
  CLUS_2                           7                            13
  CLUS_3                           4                             8
  CLUS_4                           6                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  6(4P16.3) MUTATED        8      1      2      3      4      1
  AMP PEAK  6(4P16.3) WILD-TYPE      2      3      6      3      4      5
                               vv
clus                            CLUS_7
  AMP PEAK  6(4P16.3) MUTATED        6
  AMP PEAK  6(4P16.3) WILD-TYPE      8
D6V4, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           8                             2
  CLUS_2                           1                             3
  CLUS_3                           2                             6
  CLUS_4                           3                             3
  CLUS_5                           4                             4
  CLUS_6                           1                             5
  CLUS_7                           6                             8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED        5     10      2      8
  AMP PEAK  6(4P16.3) WILD-TYPE      5     12      2     11
D6V5, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           5                             5
  CLUS_2                          10                            12
  CLUS_3                           2                             2
  CLUS_4                           8                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED        8      6      8      3
  AMP PEAK  6(4P16.3) WILD-TYPE     15      2     10      3
D6V6, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           8                            15
  CLUS_2                           6                             2
  CLUS_3                           8                            10
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(4P16.3) MUTATED        6     12      7
  AMP PEAK  6(4P16.3) WILD-TYPE      6     11     13
D6V7, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           6                             6
  CLUS_2                          12                            11
  CLUS_3                           7                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(4P16.3) MUTATED        9      5      8      3
  AMP PEAK  6(4P16.3) WILD-TYPE     15      2      9      4
D6V8, multiclass
        clus
vv       AMP PEAK  6(4P16.3) MUTATED AMP PEAK  6(4P16.3) WILD-TYPE
  CLUS_1                           9                            15
  CLUS_2                           5                             2
  CLUS_3                           8                             9
  CLUS_4                           3                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(5P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.2) MUTATED        9      4     13
  AMP PEAK  7(5P13.2) WILD-TYPE      9     17      4
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           9                             9
  CLUS_2                           4                            17
  CLUS_3                          13                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P13.2) MUTATED        7      4      4      7      4
  AMP PEAK  7(5P13.2) WILD-TYPE      4      5      6      6      9
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           4                             5
  CLUS_3                           4                             6
  CLUS_4                           7                             6
  CLUS_5                           4                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.2) MUTATED        9     10      3      4
  AMP PEAK  7(5P13.2) WILD-TYPE      5     10      9      6
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           9                             5
  CLUS_2                          10                            10
  CLUS_3                           3                             9
  CLUS_4                           4                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  7(5P13.2) MUTATED        8      0      2      3      4      1
  AMP PEAK  7(5P13.2) WILD-TYPE      2      4      6      3      4      5
                               vv
clus                            CLUS_7
  AMP PEAK  7(5P13.2) MUTATED        8
  AMP PEAK  7(5P13.2) WILD-TYPE      6
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           8                             2
  CLUS_2                           0                             4
  CLUS_3                           2                             6
  CLUS_4                           3                             3
  CLUS_5                           4                             4
  CLUS_6                           1                             5
  CLUS_7                           8                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.2) MUTATED        4     10      2     10
  AMP PEAK  7(5P13.2) WILD-TYPE      6     12      2      9
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           4                             6
  CLUS_2                          10                            12
  CLUS_3                           2                             2
  CLUS_4                          10                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.2) MUTATED       11      7      5      3
  AMP PEAK  7(5P13.2) WILD-TYPE     12      1     13      3
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                          11                            12
  CLUS_2                           7                             1
  CLUS_3                           5                            13
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P13.2) MUTATED        4     11     11
  AMP PEAK  7(5P13.2) WILD-TYPE      8     12      9
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                           4                             8
  CLUS_2                          11                            12
  CLUS_3                          11                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P13.2) MUTATED       11      6      6      3
  AMP PEAK  7(5P13.2) WILD-TYPE     13      1     11      4
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P13.2) MUTATED AMP PEAK  7(5P13.2) WILD-TYPE
  CLUS_1                          11                            13
  CLUS_2                           6                             1
  CLUS_3                           6                            11
  CLUS_4                           3                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(6P24.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P24.2) MUTATED       15     11     11
  AMP PEAK  8(6P24.2) WILD-TYPE      3     10      6
D8V1, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                          15                             3
  CLUS_2                          11                            10
  CLUS_3                          11                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(6P24.2) MUTATED        8      6      6      9      8
  AMP PEAK  8(6P24.2) WILD-TYPE      3      3      4      4      5
D8V2, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                           8                             3
  CLUS_2                           6                             3
  CLUS_3                           6                             4
  CLUS_4                           9                             4
  CLUS_5                           8                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P24.2) MUTATED       10     12      7      8
  AMP PEAK  8(6P24.2) WILD-TYPE      4      8      5      2
D8V3, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                          10                             4
  CLUS_2                          12                             8
  CLUS_3                           7                             5
  CLUS_4                           8                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  8(6P24.2) MUTATED        8      1      6      3      7      4
  AMP PEAK  8(6P24.2) WILD-TYPE      2      3      2      3      1      2
                               vv
clus                            CLUS_7
  AMP PEAK  8(6P24.2) MUTATED        8
  AMP PEAK  8(6P24.2) WILD-TYPE      6
D8V4, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                           8                             2
  CLUS_2                           1                             3
  CLUS_3                           6                             2
  CLUS_4                           3                             3
  CLUS_5                           7                             1
  CLUS_6                           4                             2
  CLUS_7                           8                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P24.2) MUTATED        7     15      3     11
  AMP PEAK  8(6P24.2) WILD-TYPE      3      7      1      8
D8V5, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                          15                             7
  CLUS_3                           3                             1
  CLUS_4                          11                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P24.2) MUTATED       15      7     10      4
  AMP PEAK  8(6P24.2) WILD-TYPE      8      1      8      2
D8V6, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                          15                             8
  CLUS_2                           7                             1
  CLUS_3                          10                             8
  CLUS_4                           4                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(6P24.2) MUTATED        8     16     12
  AMP PEAK  8(6P24.2) WILD-TYPE      4      7      8
D8V7, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                           8                             4
  CLUS_2                          16                             7
  CLUS_3                          12                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(6P24.2) MUTATED       15      6     11      4
  AMP PEAK  8(6P24.2) WILD-TYPE      9      1      6      3
D8V8, multiclass
        clus
vv       AMP PEAK  8(6P24.2) MUTATED AMP PEAK  8(6P24.2) WILD-TYPE
  CLUS_1                          15                             9
  CLUS_2                           6                             1
  CLUS_3                          11                             6
  CLUS_4                           4                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(8P11.21) MUTATED       10     11     12
  AMP PEAK  9(8P11.21) WILD-TYPE      8     10      5
D9V1, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                           10                              8
  CLUS_2                           11                             10
  CLUS_3                           12                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(8P11.21) MUTATED        6      5      6     10      6
  AMP PEAK  9(8P11.21) WILD-TYPE      5      4      4      3      7
D9V2, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            5                              4
  CLUS_3                            6                              4
  CLUS_4                           10                              3
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(8P11.21) MUTATED        7     13      6      7
  AMP PEAK  9(8P11.21) WILD-TYPE      7      7      6      3
D9V3, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                            7                              7
  CLUS_2                           13                              7
  CLUS_3                            6                              6
  CLUS_4                            7                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK  9(8P11.21) MUTATED        5      2      5      4      7      2
  AMP PEAK  9(8P11.21) WILD-TYPE      5      2      3      2      1      4
                                vv
clus                             CLUS_7
  AMP PEAK  9(8P11.21) MUTATED        8
  AMP PEAK  9(8P11.21) WILD-TYPE      6
D9V4, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            2                              2
  CLUS_3                            5                              3
  CLUS_4                            4                              2
  CLUS_5                            7                              1
  CLUS_6                            2                              4
  CLUS_7                            8                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(8P11.21) MUTATED        4     13      3     12
  AMP PEAK  9(8P11.21) WILD-TYPE      6      9      1      7
D9V5, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                           13                              9
  CLUS_3                            3                              1
  CLUS_4                           12                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(8P11.21) MUTATED       13      5     10      4
  AMP PEAK  9(8P11.21) WILD-TYPE     10      3      8      2
D9V6, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                           13                             10
  CLUS_2                            5                              3
  CLUS_3                           10                              8
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(8P11.21) MUTATED        8     12     12
  AMP PEAK  9(8P11.21) WILD-TYPE      4     11      8
D9V7, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                            8                              4
  CLUS_2                           12                             11
  CLUS_3                           12                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(8P11.21) MUTATED       14      5      8      5
  AMP PEAK  9(8P11.21) WILD-TYPE     10      2      9      2
D9V8, multiclass
        clus
vv       AMP PEAK  9(8P11.21) MUTATED AMP PEAK  9(8P11.21) WILD-TYPE
  CLUS_1                           14                             10
  CLUS_2                            5                              2
  CLUS_3                            8                              9
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(8Q11.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8Q11.23) MUTATED        9     13     16
  AMP PEAK 10(8Q11.23) WILD-TYPE      9      8      1
D10V1, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                            9                              9
  CLUS_2                           13                              8
  CLUS_3                           16                              1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(8Q11.23) MUTATED        8      5      8     11      6
  AMP PEAK 10(8Q11.23) WILD-TYPE      3      4      2      2      7
D10V2, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                            8                              3
  CLUS_2                            5                              4
  CLUS_3                            8                              2
  CLUS_4                           11                              2
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8Q11.23) MUTATED       11     15      5      7
  AMP PEAK 10(8Q11.23) WILD-TYPE      3      5      7      3
D10V3, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                           11                              3
  CLUS_2                           15                              5
  CLUS_3                            5                              7
  CLUS_4                            7                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 10(8Q11.23) MUTATED        8      2      6      4      6      1
  AMP PEAK 10(8Q11.23) WILD-TYPE      2      2      2      2      2      5
                                vv
clus                             CLUS_7
  AMP PEAK 10(8Q11.23) MUTATED       11
  AMP PEAK 10(8Q11.23) WILD-TYPE      3
D10V4, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                            2                              2
  CLUS_3                            6                              2
  CLUS_4                            4                              2
  CLUS_5                            6                              2
  CLUS_6                            1                              5
  CLUS_7                           11                              3
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8Q11.23) MUTATED        7     14      2     14
  AMP PEAK 10(8Q11.23) WILD-TYPE      3      8      2      5
D10V5, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                           14                              8
  CLUS_3                            2                              2
  CLUS_4                           14                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8Q11.23) MUTATED       16      6     11      4
  AMP PEAK 10(8Q11.23) WILD-TYPE      7      2      7      2
D10V6, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                           16                              7
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(8Q11.23) MUTATED        8     14     15
  AMP PEAK 10(8Q11.23) WILD-TYPE      4      9      5
D10V7, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                            8                              4
  CLUS_2                           14                              9
  CLUS_3                           15                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(8Q11.23) MUTATED       17      5     10      5
  AMP PEAK 10(8Q11.23) WILD-TYPE      7      2      7      2
D10V8, multiclass
        clus
vv       AMP PEAK 10(8Q11.23) MUTATED AMP PEAK 10(8Q11.23) WILD-TYPE
  CLUS_1                           17                              7
  CLUS_2                            5                              2
  CLUS_3                           10                              7
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q24.21) MUTATED        9     16     17
  AMP PEAK 11(8Q24.21) WILD-TYPE      9      5      0
D11V1, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                            9                              9
  CLUS_2                           16                              5
  CLUS_3                           17                              0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(8Q24.21) MUTATED        7      8      8     10      9
  AMP PEAK 11(8Q24.21) WILD-TYPE      4      1      2      3      4
D11V2, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            8                              1
  CLUS_3                            8                              2
  CLUS_4                           10                              3
  CLUS_5                            9                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q24.21) MUTATED       11     17      6      8
  AMP PEAK 11(8Q24.21) WILD-TYPE      3      3      6      2
D11V3, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                           11                              3
  CLUS_2                           17                              3
  CLUS_3                            6                              6
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 11(8Q24.21) MUTATED        7      3      6      5      7      2
  AMP PEAK 11(8Q24.21) WILD-TYPE      3      1      2      1      1      4
                                vv
clus                             CLUS_7
  AMP PEAK 11(8Q24.21) MUTATED       12
  AMP PEAK 11(8Q24.21) WILD-TYPE      2
D11V4, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                            3                              1
  CLUS_3                            6                              2
  CLUS_4                            5                              1
  CLUS_5                            7                              1
  CLUS_6                            2                              4
  CLUS_7                           12                              2
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q24.21) MUTATED        9     12      3     17
  AMP PEAK 11(8Q24.21) WILD-TYPE      1     10      1      2
D11V5, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                           12                             10
  CLUS_3                            3                              1
  CLUS_4                           17                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q24.21) MUTATED       21      5     10      5
  AMP PEAK 11(8Q24.21) WILD-TYPE      2      3      8      1
D11V6, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                           21                              2
  CLUS_2                            5                              3
  CLUS_3                           10                              8
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(8Q24.21) MUTATED       11     12     18
  AMP PEAK 11(8Q24.21) WILD-TYPE      1     11      2
D11V7, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                           11                              1
  CLUS_2                           12                             11
  CLUS_3                           18                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(8Q24.21) MUTATED       22      4      9      6
  AMP PEAK 11(8Q24.21) WILD-TYPE      2      3      8      1
D11V8, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) MUTATED AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                           22                              2
  CLUS_2                            4                              3
  CLUS_3                            9                              8
  CLUS_4                            6                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED        8     15     17
  AMP PEAK 12(8Q24.21) WILD-TYPE     10      6      0
D12V1, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                           15                              6
  CLUS_3                           17                              0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(8Q24.21) MUTATED        6      8      7     11      8
  AMP PEAK 12(8Q24.21) WILD-TYPE      5      1      3      2      5
D12V2, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            8                              1
  CLUS_3                            7                              3
  CLUS_4                           11                              2
  CLUS_5                            8                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       10     17      5      8
  AMP PEAK 12(8Q24.21) WILD-TYPE      4      3      7      2
D12V3, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           10                              4
  CLUS_2                           17                              3
  CLUS_3                            5                              7
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 12(8Q24.21) MUTATED        6      3      5      4      7      2
  AMP PEAK 12(8Q24.21) WILD-TYPE      4      1      3      2      1      4
                                vv
clus                             CLUS_7
  AMP PEAK 12(8Q24.21) MUTATED       13
  AMP PEAK 12(8Q24.21) WILD-TYPE      1
D12V4, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                            6                              4
  CLUS_2                            3                              1
  CLUS_3                            5                              3
  CLUS_4                            4                              2
  CLUS_5                            7                              1
  CLUS_6                            2                              4
  CLUS_7                           13                              1
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED        9     11      3     16
  AMP PEAK 12(8Q24.21) WILD-TYPE      1     11      1      3
D12V5, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                           11                             11
  CLUS_3                            3                              1
  CLUS_4                           16                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       20      4     10      5
  AMP PEAK 12(8Q24.21) WILD-TYPE      3      4      8      1
D12V6, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           20                              3
  CLUS_2                            4                              4
  CLUS_3                           10                              8
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(8Q24.21) MUTATED       11     11     17
  AMP PEAK 12(8Q24.21) WILD-TYPE      1     12      3
D12V7, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           11                              1
  CLUS_2                           11                             12
  CLUS_3                           17                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(8Q24.21) MUTATED       21      3      9      6
  AMP PEAK 12(8Q24.21) WILD-TYPE      3      4      8      1
D12V8, multiclass
        clus
vv       AMP PEAK 12(8Q24.21) MUTATED AMP PEAK 12(8Q24.21) WILD-TYPE
  CLUS_1                           21                              3
  CLUS_2                            3                              4
  CLUS_3                            9                              8
  CLUS_4                            6                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(10Q22.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(10Q22.2) MUTATED       10      7      9
  AMP PEAK 13(10Q22.2) WILD-TYPE      8     14      8
D13V1, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                           10                              8
  CLUS_2                            7                             14
  CLUS_3                            9                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(10Q22.2) MUTATED        7      3      5      7      4
  AMP PEAK 13(10Q22.2) WILD-TYPE      4      6      5      6      9
D13V2, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            3                              6
  CLUS_3                            5                              5
  CLUS_4                            7                              6
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(10Q22.2) MUTATED        7      9      6      4
  AMP PEAK 13(10Q22.2) WILD-TYPE      7     11      6      6
D13V3, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            7                              7
  CLUS_2                            9                             11
  CLUS_3                            6                              6
  CLUS_4                            4                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 13(10Q22.2) MUTATED        6      1      3      3      3      3
  AMP PEAK 13(10Q22.2) WILD-TYPE      4      3      5      3      5      3
                                vv
clus                             CLUS_7
  AMP PEAK 13(10Q22.2) MUTATED        7
  AMP PEAK 13(10Q22.2) WILD-TYPE      7
D13V4, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            6                              4
  CLUS_2                            1                              3
  CLUS_3                            3                              5
  CLUS_4                            3                              3
  CLUS_5                            3                              5
  CLUS_6                            3                              3
  CLUS_7                            7                              7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(10Q22.2) MUTATED        4     12      1      8
  AMP PEAK 13(10Q22.2) WILD-TYPE      6     10      3     11
D13V5, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                           12                             10
  CLUS_3                            1                              3
  CLUS_4                            8                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(10Q22.2) MUTATED        9      5      8      3
  AMP PEAK 13(10Q22.2) WILD-TYPE     14      3     10      3
D13V6, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            9                             14
  CLUS_2                            5                              3
  CLUS_3                            8                             10
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(10Q22.2) MUTATED        5     11      9
  AMP PEAK 13(10Q22.2) WILD-TYPE      7     12     11
D13V7, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                           11                             12
  CLUS_3                            9                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(10Q22.2) MUTATED        9      5      7      4
  AMP PEAK 13(10Q22.2) WILD-TYPE     15      2     10      3
D13V8, multiclass
        clus
vv       AMP PEAK 13(10Q22.2) MUTATED AMP PEAK 13(10Q22.2) WILD-TYPE
  CLUS_1                            9                             15
  CLUS_2                            5                              2
  CLUS_3                            7                             10
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(11Q13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(11Q13.1) MUTATED        7      6      6
  AMP PEAK 14(11Q13.1) WILD-TYPE     11     15     11
D14V1, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            7                             11
  CLUS_2                            6                             15
  CLUS_3                            6                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(11Q13.1) MUTATED        4      5      3      3      4
  AMP PEAK 14(11Q13.1) WILD-TYPE      7      4      7     10      9
D14V2, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            4                              7
  CLUS_2                            5                              4
  CLUS_3                            3                              7
  CLUS_4                            3                             10
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(11Q13.1) MUTATED        6      4      4      5
  AMP PEAK 14(11Q13.1) WILD-TYPE      8     16      8      5
D14V3, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            4                             16
  CLUS_3                            4                              8
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 14(11Q13.1) MUTATED        4      1      3      3      5      1
  AMP PEAK 14(11Q13.1) WILD-TYPE      6      3      5      3      3      5
                                vv
clus                             CLUS_7
  AMP PEAK 14(11Q13.1) MUTATED        2
  AMP PEAK 14(11Q13.1) WILD-TYPE     12
D14V4, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            1                              3
  CLUS_3                            3                              5
  CLUS_4                            3                              3
  CLUS_5                            5                              3
  CLUS_6                            1                              5
  CLUS_7                            2                             12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(11Q13.1) MUTATED        4      8      2      5
  AMP PEAK 14(11Q13.1) WILD-TYPE      6     14      2     14
D14V5, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            8                             14
  CLUS_3                            2                              2
  CLUS_4                            5                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(11Q13.1) MUTATED        8      3      6      2
  AMP PEAK 14(11Q13.1) WILD-TYPE     15      5     12      4
D14V6, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            3                              5
  CLUS_3                            6                             12
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(11Q13.1) MUTATED        5      8      6
  AMP PEAK 14(11Q13.1) WILD-TYPE      7     15     14
D14V7, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                            8                             15
  CLUS_3                            6                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(11Q13.1) MUTATED        8      3      6      2
  AMP PEAK 14(11Q13.1) WILD-TYPE     16      4     11      5
D14V8, multiclass
        clus
vv       AMP PEAK 14(11Q13.1) MUTATED AMP PEAK 14(11Q13.1) WILD-TYPE
  CLUS_1                            8                             16
  CLUS_2                            3                              4
  CLUS_3                            6                             11
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(12Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12Q12) MUTATED       11      8      3
  AMP PEAK 15(12Q12) WILD-TYPE      7     13     14
D15V1, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                         11                            7
  CLUS_2                          8                           13
  CLUS_3                          3                           14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(12Q12) MUTATED        5      7      3      3      4
  AMP PEAK 15(12Q12) WILD-TYPE      6      2      7     10      9
D15V2, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                          5                            6
  CLUS_2                          7                            2
  CLUS_3                          3                            7
  CLUS_4                          3                           10
  CLUS_5                          4                            9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(12Q12) MUTATED        7      6      3      6
  AMP PEAK 15(12Q12) WILD-TYPE      7     14      9      4
D15V3, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                          7                            7
  CLUS_2                          6                           14
  CLUS_3                          3                            9
  CLUS_4                          6                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 15(12Q12) MUTATED        4      3      4      3      4      1      3
  AMP PEAK 15(12Q12) WILD-TYPE      6      1      4      3      4      5     11
D15V4, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                          4                            6
  CLUS_2                          3                            1
  CLUS_3                          4                            4
  CLUS_4                          3                            3
  CLUS_5                          4                            4
  CLUS_6                          1                            5
  CLUS_7                          3                           11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(12Q12) MUTATED        4     10      1      7
  AMP PEAK 15(12Q12) WILD-TYPE      6     12      3     12
D15V5, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                          4                            6
  CLUS_2                         10                           12
  CLUS_3                          1                            3
  CLUS_4                          7                           12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(12Q12) MUTATED       10      3      7      2
  AMP PEAK 15(12Q12) WILD-TYPE     13      5     11      4
D15V6, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                         10                           13
  CLUS_2                          3                            5
  CLUS_3                          7                           11
  CLUS_4                          2                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(12Q12) MUTATED        5     10      7
  AMP PEAK 15(12Q12) WILD-TYPE      7     13     13
D15V7, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                          5                            7
  CLUS_2                         10                           13
  CLUS_3                          7                           13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(12Q12) MUTATED       10      3      7      2
  AMP PEAK 15(12Q12) WILD-TYPE     14      4     10      5
D15V8, multiclass
        clus
vv       AMP PEAK 15(12Q12) MUTATED AMP PEAK 15(12Q12) WILD-TYPE
  CLUS_1                         10                           14
  CLUS_2                          3                            4
  CLUS_3                          7                           10
  CLUS_4                          2                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED        7      5      5
  AMP PEAK 16(12Q15) WILD-TYPE     11     16     12
D16V1, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          7                           11
  CLUS_2                          5                           16
  CLUS_3                          5                           12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(12Q15) MUTATED        3      4      2      2      6
  AMP PEAK 16(12Q15) WILD-TYPE      8      5      8     11      7
D16V2, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          3                            8
  CLUS_2                          4                            5
  CLUS_3                          2                            8
  CLUS_4                          2                           11
  CLUS_5                          6                            7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12Q15) MUTATED        6      3      4      4
  AMP PEAK 16(12Q15) WILD-TYPE      8     17      8      6
D16V3, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          6                            8
  CLUS_2                          3                           17
  CLUS_3                          4                            8
  CLUS_4                          4                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 16(12Q15) MUTATED        4      1      3      3      2      2      2
  AMP PEAK 16(12Q15) WILD-TYPE      6      3      5      3      6      4     12
D16V4, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          4                            6
  CLUS_2                          1                            3
  CLUS_3                          3                            5
  CLUS_4                          3                            3
  CLUS_5                          2                            6
  CLUS_6                          2                            4
  CLUS_7                          2                           12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12Q15) MUTATED        3      7      2      5
  AMP PEAK 16(12Q15) WILD-TYPE      7     15      2     14
D16V5, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          3                            7
  CLUS_2                          7                           15
  CLUS_3                          2                            2
  CLUS_4                          5                           14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12Q15) MUTATED       10      3      4      0
  AMP PEAK 16(12Q15) WILD-TYPE     13      5     14      6
D16V6, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         10                           13
  CLUS_2                          3                            5
  CLUS_3                          4                           14
  CLUS_4                          0                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(12Q15) MUTATED        4      7      6
  AMP PEAK 16(12Q15) WILD-TYPE      8     16     14
D16V7, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                          4                            8
  CLUS_2                          7                           16
  CLUS_3                          6                           14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(12Q15) MUTATED       10      2      5      0
  AMP PEAK 16(12Q15) WILD-TYPE     14      5     12      7
D16V8, multiclass
        clus
vv       AMP PEAK 16(12Q15) MUTATED AMP PEAK 16(12Q15) WILD-TYPE
  CLUS_1                         10                           14
  CLUS_2                          2                            5
  CLUS_3                          5                           12
  CLUS_4                          0                            7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(13Q31.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(13Q31.3) MUTATED       10      9      6
  AMP PEAK 17(13Q31.3) WILD-TYPE      8     12     11
D17V1, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                           10                              8
  CLUS_2                            9                             12
  CLUS_3                            6                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(13Q31.3) MUTATED        7      4      3      4      7
  AMP PEAK 17(13Q31.3) WILD-TYPE      4      5      7      9      6
D17V2, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            4                              5
  CLUS_3                            3                              7
  CLUS_4                            4                              9
  CLUS_5                            7                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(13Q31.3) MUTATED        9      5      6      5
  AMP PEAK 17(13Q31.3) WILD-TYPE      5     15      6      5
D17V3, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            9                              5
  CLUS_2                            5                             15
  CLUS_3                            6                              6
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 17(13Q31.3) MUTATED        7      3      4      3      3      3
  AMP PEAK 17(13Q31.3) WILD-TYPE      3      1      4      3      5      3
                                vv
clus                             CLUS_7
  AMP PEAK 17(13Q31.3) MUTATED        2
  AMP PEAK 17(13Q31.3) WILD-TYPE     12
D17V4, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                            3                              1
  CLUS_3                            4                              4
  CLUS_4                            3                              3
  CLUS_5                            3                              5
  CLUS_6                            3                              3
  CLUS_7                            2                             12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(13Q31.3) MUTATED        5     14      1      5
  AMP PEAK 17(13Q31.3) WILD-TYPE      5      8      3     14
D17V5, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                           14                              8
  CLUS_3                            1                              3
  CLUS_4                            5                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(13Q31.3) MUTATED        6      6     11      2
  AMP PEAK 17(13Q31.3) WILD-TYPE     17      2      7      4
D17V6, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(13Q31.3) MUTATED        7     15      3
  AMP PEAK 17(13Q31.3) WILD-TYPE      5      8     17
D17V7, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            7                              5
  CLUS_2                           15                              8
  CLUS_3                            3                             17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(13Q31.3) MUTATED        7      5     11      2
  AMP PEAK 17(13Q31.3) WILD-TYPE     17      2      6      5
D17V8, multiclass
        clus
vv       AMP PEAK 17(13Q31.3) MUTATED AMP PEAK 17(13Q31.3) WILD-TYPE
  CLUS_1                            7                             17
  CLUS_2                            5                              2
  CLUS_3                           11                              6
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(16P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(16P11.2) MUTATED        8      3      9
  AMP PEAK 18(16P11.2) WILD-TYPE     10     18      8
D18V1, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                            3                             18
  CLUS_3                            9                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(16P11.2) MUTATED        6      4      1      4      5
  AMP PEAK 18(16P11.2) WILD-TYPE      5      5      9      9      8
D18V2, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            4                              5
  CLUS_3                            1                              9
  CLUS_4                            4                              9
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(16P11.2) MUTATED        6      5      5      4
  AMP PEAK 18(16P11.2) WILD-TYPE      8     15      7      6
D18V3, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            5                             15
  CLUS_3                            5                              7
  CLUS_4                            4                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 18(16P11.2) MUTATED        5      1      1      5      4      1
  AMP PEAK 18(16P11.2) WILD-TYPE      5      3      7      1      4      5
                                vv
clus                             CLUS_7
  AMP PEAK 18(16P11.2) MUTATED        3
  AMP PEAK 18(16P11.2) WILD-TYPE     11
D18V4, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            1                              3
  CLUS_3                            1                              7
  CLUS_4                            5                              1
  CLUS_5                            4                              4
  CLUS_6                            1                              5
  CLUS_7                            3                             11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(16P11.2) MUTATED        5      7      1      7
  AMP PEAK 18(16P11.2) WILD-TYPE      5     15      3     12
D18V5, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            7                             15
  CLUS_3                            1                              3
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(16P11.2) MUTATED        8      5      5      2
  AMP PEAK 18(16P11.2) WILD-TYPE     15      3     13      4
D18V6, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            5                              3
  CLUS_3                            5                             13
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(16P11.2) MUTATED        6      8      6
  AMP PEAK 18(16P11.2) WILD-TYPE      6     15     14
D18V7, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            6                              6
  CLUS_2                            8                             15
  CLUS_3                            6                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(16P11.2) MUTATED        9      5      4      2
  AMP PEAK 18(16P11.2) WILD-TYPE     15      2     13      5
D18V8, multiclass
        clus
vv       AMP PEAK 18(16P11.2) MUTATED AMP PEAK 18(16P11.2) WILD-TYPE
  CLUS_1                            9                             15
  CLUS_2                            5                              2
  CLUS_3                            4                             13
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED       10     11      6
  AMP PEAK 19(17Q12) WILD-TYPE      8     10     11
D19V1, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         10                            8
  CLUS_2                         11                           10
  CLUS_3                          6                           11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(17Q12) MUTATED        7      4      3      4      9
  AMP PEAK 19(17Q12) WILD-TYPE      4      5      7      9      4
D19V2, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          7                            4
  CLUS_2                          4                            5
  CLUS_3                          3                            7
  CLUS_4                          4                            9
  CLUS_5                          9                            4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(17Q12) MUTATED        9      7      7      4
  AMP PEAK 19(17Q12) WILD-TYPE      5     13      5      6
D19V3, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          9                            5
  CLUS_2                          7                           13
  CLUS_3                          7                            5
  CLUS_4                          4                            6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 19(17Q12) MUTATED        7      1      4      4      4      3      4
  AMP PEAK 19(17Q12) WILD-TYPE      3      3      4      2      4      3     10
D19V4, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          7                            3
  CLUS_2                          1                            3
  CLUS_3                          4                            4
  CLUS_4                          4                            2
  CLUS_5                          4                            4
  CLUS_6                          3                            3
  CLUS_7                          4                           10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(17Q12) MUTATED        6     13      1      7
  AMP PEAK 19(17Q12) WILD-TYPE      4      9      3     12
D19V5, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          6                            4
  CLUS_2                         13                            9
  CLUS_3                          1                            3
  CLUS_4                          7                           12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(17Q12) MUTATED       11      5      9      2
  AMP PEAK 19(17Q12) WILD-TYPE     12      3      9      4
D19V6, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         11                           12
  CLUS_2                          5                            3
  CLUS_3                          9                            9
  CLUS_4                          2                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(17Q12) MUTATED        7     12      8
  AMP PEAK 19(17Q12) WILD-TYPE      5     11     12
D19V7, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                          7                            5
  CLUS_2                         12                           11
  CLUS_3                          8                           12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(17Q12) MUTATED       12      4      8      3
  AMP PEAK 19(17Q12) WILD-TYPE     12      3      9      4
D19V8, multiclass
        clus
vv       AMP PEAK 19(17Q12) MUTATED AMP PEAK 19(17Q12) WILD-TYPE
  CLUS_1                         12                           12
  CLUS_2                          4                            3
  CLUS_3                          8                            9
  CLUS_4                          3                            4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(17Q25.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(17Q25.1) MUTATED       12     10     10
  AMP PEAK 20(17Q25.1) WILD-TYPE      6     11      7
D20V1, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                           12                              6
  CLUS_2                           10                             11
  CLUS_3                           10                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(17Q25.1) MUTATED        9      5      1      9      8
  AMP PEAK 20(17Q25.1) WILD-TYPE      2      4      9      4      5
D20V2, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                            9                              2
  CLUS_2                            5                              4
  CLUS_3                            1                              9
  CLUS_4                            9                              4
  CLUS_5                            8                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(17Q25.1) MUTATED       10     10      7      5
  AMP PEAK 20(17Q25.1) WILD-TYPE      4     10      5      5
D20V3, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                           10                              4
  CLUS_2                           10                             10
  CLUS_3                            7                              5
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 20(17Q25.1) MUTATED        8      2      2      3      6      4
  AMP PEAK 20(17Q25.1) WILD-TYPE      2      2      6      3      2      2
                                vv
clus                             CLUS_7
  AMP PEAK 20(17Q25.1) MUTATED        7
  AMP PEAK 20(17Q25.1) WILD-TYPE      7
D20V4, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                            2                              2
  CLUS_3                            2                              6
  CLUS_4                            3                              3
  CLUS_5                            6                              2
  CLUS_6                            4                              2
  CLUS_7                            7                              7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(17Q25.1) MUTATED        6     14      3      9
  AMP PEAK 20(17Q25.1) WILD-TYPE      4      8      1     10
D20V5, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                            6                              4
  CLUS_2                           14                              8
  CLUS_3                            3                              1
  CLUS_4                            9                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(17Q25.1) MUTATED       12      6     11      3
  AMP PEAK 20(17Q25.1) WILD-TYPE     11      2      7      3
D20V6, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                           12                             11
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(17Q25.1) MUTATED        8     15      9
  AMP PEAK 20(17Q25.1) WILD-TYPE      4      8     11
D20V7, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                            8                              4
  CLUS_2                           15                              8
  CLUS_3                            9                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(17Q25.1) MUTATED       13      5     11      3
  AMP PEAK 20(17Q25.1) WILD-TYPE     11      2      6      4
D20V8, multiclass
        clus
vv       AMP PEAK 20(17Q25.1) MUTATED AMP PEAK 20(17Q25.1) WILD-TYPE
  CLUS_1                           13                             11
  CLUS_2                            5                              2
  CLUS_3                           11                              6
  CLUS_4                            3                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        6      5      8
  AMP PEAK 21(19P13.2) WILD-TYPE     12     16      9
D21V1, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            6                             12
  CLUS_2                            5                             16
  CLUS_3                            8                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(19P13.2) MUTATED        4      1      2      7      5
  AMP PEAK 21(19P13.2) WILD-TYPE      7      8      8      6      8
D21V2, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            4                              7
  CLUS_2                            1                              8
  CLUS_3                            2                              8
  CLUS_4                            7                              6
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(19P13.2) MUTATED        5      8      4      2
  AMP PEAK 21(19P13.2) WILD-TYPE      9     12      8      8
D21V3, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            5                              9
  CLUS_2                            8                             12
  CLUS_3                            4                              8
  CLUS_4                            2                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 21(19P13.2) MUTATED        4      0      1      2      2      2
  AMP PEAK 21(19P13.2) WILD-TYPE      6      4      7      4      6      4
                                vv
clus                             CLUS_7
  AMP PEAK 21(19P13.2) MUTATED        8
  AMP PEAK 21(19P13.2) WILD-TYPE      6
D21V4, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            0                              4
  CLUS_3                            1                              7
  CLUS_4                            2                              4
  CLUS_5                            2                              6
  CLUS_6                            2                              4
  CLUS_7                            8                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(19P13.2) MUTATED        3      5      2      9
  AMP PEAK 21(19P13.2) WILD-TYPE      7     17      2     10
D21V5, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            3                              7
  CLUS_2                            5                             17
  CLUS_3                            2                              2
  CLUS_4                            9                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(19P13.2) MUTATED        8      3      4      4
  AMP PEAK 21(19P13.2) WILD-TYPE     15      5     14      2
D21V6, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            3                              5
  CLUS_3                            4                             14
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(19P13.2) MUTATED        4      5     10
  AMP PEAK 21(19P13.2) WILD-TYPE      8     18     10
D21V7, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            4                              8
  CLUS_2                            5                             18
  CLUS_3                           10                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(19P13.2) MUTATED        9      3      3      4
  AMP PEAK 21(19P13.2) WILD-TYPE     15      4     14      3
D21V8, multiclass
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  CLUS_1                            9                             15
  CLUS_2                            3                              4
  CLUS_3                            3                             14
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q12) MUTATED       18     12     15
  AMP PEAK 22(19Q12) WILD-TYPE      0      9      2
D22V1, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         18                            0
  CLUS_2                         12                            9
  CLUS_3                         15                            2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(19Q12) MUTATED       11      7      3     11     13
  AMP PEAK 22(19Q12) WILD-TYPE      0      2      7      2      0
D22V2, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         11                            0
  CLUS_2                          7                            2
  CLUS_3                          3                            7
  CLUS_4                         11                            2
  CLUS_5                         13                            0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(19Q12) MUTATED       13     13     11      8
  AMP PEAK 22(19Q12) WILD-TYPE      1      7      1      2
D22V3, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         13                            1
  CLUS_2                         13                            7
  CLUS_3                         11                            1
  CLUS_4                          8                            2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  AMP PEAK 22(19Q12) MUTATED       10      3      3      6      6      6     11
  AMP PEAK 22(19Q12) WILD-TYPE      0      1      5      0      2      0      3
D22V4, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         10                            0
  CLUS_2                          3                            1
  CLUS_3                          3                            5
  CLUS_4                          6                            0
  CLUS_5                          6                            2
  CLUS_6                          6                            0
  CLUS_7                         11                            3
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(19Q12) MUTATED        8     19      4     14
  AMP PEAK 22(19Q12) WILD-TYPE      2      3      0      5
D22V5, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                          8                            2
  CLUS_2                         19                            3
  CLUS_3                          4                            0
  CLUS_4                         14                            5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(19Q12) MUTATED       17      8     15      5
  AMP PEAK 22(19Q12) WILD-TYPE      6      0      3      1
D22V6, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         17                            6
  CLUS_2                          8                            0
  CLUS_3                         15                            3
  CLUS_4                          5                            1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(19Q12) MUTATED       10     21     14
  AMP PEAK 22(19Q12) WILD-TYPE      2      2      6
D22V7, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         10                            2
  CLUS_2                         21                            2
  CLUS_3                         14                            6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(19Q12) MUTATED       18      7     15      5
  AMP PEAK 22(19Q12) WILD-TYPE      6      0      2      2
D22V8, multiclass
        clus
vv       AMP PEAK 22(19Q12) MUTATED AMP PEAK 22(19Q12) WILD-TYPE
  CLUS_1                         18                            6
  CLUS_2                          7                            0
  CLUS_3                         15                            2
  CLUS_4                          5                            2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20Q11.21) MUTATED       18     14     16
  AMP PEAK 23(20Q11.21) WILD-TYPE      0      7      1
D23V1, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            18                               0
  CLUS_2                            14                               7
  CLUS_3                            16                               1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(20Q11.21) MUTATED       11      9      7     10     11
  AMP PEAK 23(20Q11.21) WILD-TYPE      0      0      3      3      2
D23V2, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            11                               0
  CLUS_2                             9                               0
  CLUS_3                             7                               3
  CLUS_4                            10                               3
  CLUS_5                            11                               2
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(20Q11.21) MUTATED       13     15     11      9
  AMP PEAK 23(20Q11.21) WILD-TYPE      1      5      1      1
D23V3, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            13                               1
  CLUS_2                            15                               5
  CLUS_3                            11                               1
  CLUS_4                             9                               1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 23(20Q11.21) MUTATED       10      4      6      6      7      5
  AMP PEAK 23(20Q11.21) WILD-TYPE      0      0      2      0      1      1
                                 vv
clus                              CLUS_7
  AMP PEAK 23(20Q11.21) MUTATED       10
  AMP PEAK 23(20Q11.21) WILD-TYPE      4
D23V4, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            10                               0
  CLUS_2                             4                               0
  CLUS_3                             6                               2
  CLUS_4                             6                               0
  CLUS_5                             7                               1
  CLUS_6                             5                               1
  CLUS_7                            10                               4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(20Q11.21) MUTATED        9     21      3     14
  AMP PEAK 23(20Q11.21) WILD-TYPE      1      1      1      5
D23V5, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                             9                               1
  CLUS_2                            21                               1
  CLUS_3                             3                               1
  CLUS_4                            14                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(20Q11.21) MUTATED       18      8     17      4
  AMP PEAK 23(20Q11.21) WILD-TYPE      5      0      1      2
D23V6, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            18                               5
  CLUS_2                             8                               0
  CLUS_3                            17                               1
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(20Q11.21) MUTATED       11     22     14
  AMP PEAK 23(20Q11.21) WILD-TYPE      1      1      6
D23V7, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            11                               1
  CLUS_2                            22                               1
  CLUS_3                            14                               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(20Q11.21) MUTATED       19      7     16      5
  AMP PEAK 23(20Q11.21) WILD-TYPE      5      0      1      2
D23V8, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) MUTATED AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                            19                               5
  CLUS_2                             7                               0
  CLUS_3                            16                               1
  CLUS_4                             5                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(20Q11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(20Q11.21) MUTATED       17     15     16
  AMP PEAK 24(20Q11.21) WILD-TYPE      1      6      1
D24V1, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            17                               1
  CLUS_2                            15                               6
  CLUS_3                            16                               1
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(20Q11.21) MUTATED       11      9      8     10     10
  AMP PEAK 24(20Q11.21) WILD-TYPE      0      0      2      3      3
D24V2, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            11                               0
  CLUS_2                             9                               0
  CLUS_3                             8                               2
  CLUS_4                            10                               3
  CLUS_5                            10                               3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(20Q11.21) MUTATED       14     15     10      9
  AMP PEAK 24(20Q11.21) WILD-TYPE      0      5      2      1
D24V3, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            14                               0
  CLUS_2                            15                               5
  CLUS_3                            10                               2
  CLUS_4                             9                               1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 24(20Q11.21) MUTATED       10      4      7      6      7      4
  AMP PEAK 24(20Q11.21) WILD-TYPE      0      0      1      0      1      2
                                 vv
clus                              CLUS_7
  AMP PEAK 24(20Q11.21) MUTATED       10
  AMP PEAK 24(20Q11.21) WILD-TYPE      4
D24V4, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            10                               0
  CLUS_2                             4                               0
  CLUS_3                             7                               1
  CLUS_4                             6                               0
  CLUS_5                             7                               1
  CLUS_6                             4                               2
  CLUS_7                            10                               4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(20Q11.21) MUTATED       10     20      3     14
  AMP PEAK 24(20Q11.21) WILD-TYPE      0      2      1      5
D24V5, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            10                               0
  CLUS_2                            20                               2
  CLUS_3                             3                               1
  CLUS_4                            14                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(20Q11.21) MUTATED       19      8     16      4
  AMP PEAK 24(20Q11.21) WILD-TYPE      4      0      2      2
D24V6, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            19                               4
  CLUS_2                             8                               0
  CLUS_3                            16                               2
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(20Q11.21) MUTATED       11     21     15
  AMP PEAK 24(20Q11.21) WILD-TYPE      1      2      5
D24V7, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            11                               1
  CLUS_2                            21                               2
  CLUS_3                            15                               5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(20Q11.21) MUTATED       20      7     15      5
  AMP PEAK 24(20Q11.21) WILD-TYPE      4      0      2      2
D24V8, multiclass
        clus
vv       AMP PEAK 24(20Q11.21) MUTATED AMP PEAK 24(20Q11.21) WILD-TYPE
  CLUS_1                            20                               4
  CLUS_2                             7                               0
  CLUS_3                            15                               2
  CLUS_4                             5                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(XP11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XP11.21) MUTATED       13      7      8
  AMP PEAK 25(XP11.21) WILD-TYPE      5     14      9
D25V1, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                           13                              5
  CLUS_2                            7                             14
  CLUS_3                            8                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(XP11.21) MUTATED        6      6      5      7      4
  AMP PEAK 25(XP11.21) WILD-TYPE      5      3      5      6      9
D25V2, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            6                              3
  CLUS_3                            5                              5
  CLUS_4                            7                              6
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(XP11.21) MUTATED        6      8      5      9
  AMP PEAK 25(XP11.21) WILD-TYPE      8     12      7      1
D25V3, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            8                             12
  CLUS_3                            5                              7
  CLUS_4                            9                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMP PEAK 25(XP11.21) MUTATED        6      1      3      3      7      2
  AMP PEAK 25(XP11.21) WILD-TYPE      4      3      5      3      1      4
                                vv
clus                             CLUS_7
  AMP PEAK 25(XP11.21) MUTATED        6
  AMP PEAK 25(XP11.21) WILD-TYPE      8
D25V4, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            6                              4
  CLUS_2                            1                              3
  CLUS_3                            3                              5
  CLUS_4                            3                              3
  CLUS_5                            7                              1
  CLUS_6                            2                              4
  CLUS_7                            6                              8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(XP11.21) MUTATED        2     15      3      7
  AMP PEAK 25(XP11.21) WILD-TYPE      8      7      1     12
D25V5, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            2                              8
  CLUS_2                           15                              7
  CLUS_3                            3                              1
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(XP11.21) MUTATED        7      6     11      3
  AMP PEAK 25(XP11.21) WILD-TYPE     16      2      7      3
D25V6, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(XP11.21) MUTATED        5     15      7
  AMP PEAK 25(XP11.21) WILD-TYPE      7      8     13
D25V7, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                           15                              8
  CLUS_3                            7                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(XP11.21) MUTATED        7      5     11      4
  AMP PEAK 25(XP11.21) WILD-TYPE     17      2      6      3
D25V8, multiclass
        clus
vv       AMP PEAK 25(XP11.21) MUTATED AMP PEAK 25(XP11.21) WILD-TYPE
  CLUS_1                            7                             17
  CLUS_2                            5                              2
  CLUS_3                           11                              6
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = DEL PEAK  1(1P36.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED        6      6      7
  DEL PEAK  1(1P36.21) WILD-TYPE     12     15     10
D26V1, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            6                             12
  CLUS_2                            6                             15
  CLUS_3                            7                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.21) MUTATED        3      4      1      6      5
  DEL PEAK  1(1P36.21) WILD-TYPE      8      5      9      7      8
D26V2, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            4                              5
  CLUS_3                            1                              9
  CLUS_4                            6                              7
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED        6      8      4      1
  DEL PEAK  1(1P36.21) WILD-TYPE      8     12      8      9
D26V3, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            8                             12
  CLUS_3                            4                              8
  CLUS_4                            1                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  1(1P36.21) MUTATED        3      2      1      3      0      2
  DEL PEAK  1(1P36.21) WILD-TYPE      7      2      7      3      8      4
                                vv
clus                             CLUS_7
  DEL PEAK  1(1P36.21) MUTATED        8
  DEL PEAK  1(1P36.21) WILD-TYPE      6
D26V4, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            3                              7
  CLUS_2                            2                              2
  CLUS_3                            1                              7
  CLUS_4                            3                              3
  CLUS_5                            0                              8
  CLUS_6                            2                              4
  CLUS_7                            8                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED        5      4      1      9
  DEL PEAK  1(1P36.21) WILD-TYPE      5     18      3     10
D26V5, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            4                             18
  CLUS_3                            1                              3
  CLUS_4                            9                             10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED       13      1      3      2
  DEL PEAK  1(1P36.21) WILD-TYPE     10      7     15      4
D26V6, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           13                             10
  CLUS_2                            1                              7
  CLUS_3                            3                             15
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.21) MUTATED        5      4     10
  DEL PEAK  1(1P36.21) WILD-TYPE      7     19     10
D26V7, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                            4                             19
  CLUS_3                           10                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.21) MUTATED       13      1      3      2
  DEL PEAK  1(1P36.21) WILD-TYPE     11      6     14      5
D26V8, multiclass
        clus
vv       DEL PEAK  1(1P36.21) MUTATED DEL PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           13                             11
  CLUS_2                            1                              6
  CLUS_3                            3                             14
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = DEL PEAK  2(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q22.1) MUTATED        3      4      4
  DEL PEAK  2(2Q22.1) WILD-TYPE     15     17     13
D27V1, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           3                            15
  CLUS_2                           4                            17
  CLUS_3                           4                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(2Q22.1) MUTATED        4      2      2      1      2
  DEL PEAK  2(2Q22.1) WILD-TYPE      7      7      8     12     11
D27V2, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           4                             7
  CLUS_2                           2                             7
  CLUS_3                           2                             8
  CLUS_4                           1                            12
  CLUS_5                           2                            11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(2Q22.1) MUTATED        4      2      3      2
  DEL PEAK  2(2Q22.1) WILD-TYPE     10     18      9      8
D27V3, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           4                            10
  CLUS_2                           2                            18
  CLUS_3                           3                             9
  CLUS_4                           2                             8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  2(2Q22.1) MUTATED        2      2      2      2      2      1
  DEL PEAK  2(2Q22.1) WILD-TYPE      8      2      6      4      6      5
                               vv
clus                            CLUS_7
  DEL PEAK  2(2Q22.1) MUTATED        0
  DEL PEAK  2(2Q22.1) WILD-TYPE     14
D27V4, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           2                             8
  CLUS_2                           2                             2
  CLUS_3                           2                             6
  CLUS_4                           2                             4
  CLUS_5                           2                             6
  CLUS_6                           1                             5
  CLUS_7                           0                            14
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(2Q22.1) MUTATED        2      6      1      2
  DEL PEAK  2(2Q22.1) WILD-TYPE      8     16      3     17
D27V5, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           2                             8
  CLUS_2                           6                            16
  CLUS_3                           1                             3
  CLUS_4                           2                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(2Q22.1) MUTATED        4      2      5      0
  DEL PEAK  2(2Q22.1) WILD-TYPE     19      6     13      6
D27V6, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           4                            19
  CLUS_2                           2                             6
  CLUS_3                           5                            13
  CLUS_4                           0                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(2Q22.1) MUTATED        4      5      2
  DEL PEAK  2(2Q22.1) WILD-TYPE      8     18     18
D27V7, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           4                             8
  CLUS_2                           5                            18
  CLUS_3                           2                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(2Q22.1) MUTATED        5      2      3      1
  DEL PEAK  2(2Q22.1) WILD-TYPE     19      5     14      6
D27V8, multiclass
        clus
vv       DEL PEAK  2(2Q22.1) MUTATED DEL PEAK  2(2Q22.1) WILD-TYPE
  CLUS_1                           5                            19
  CLUS_2                           2                             5
  CLUS_3                           3                            14
  CLUS_4                           1                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = DEL PEAK  3(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P14.2) MUTATED       12     15     10
  DEL PEAK  3(3P14.2) WILD-TYPE      6      6      7
D28V1, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                          12                             6
  CLUS_2                          15                             6
  CLUS_3                          10                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(3P14.2) MUTATED        7      7      6      7     10
  DEL PEAK  3(3P14.2) WILD-TYPE      4      2      4      6      3
D28V2, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           7                             2
  CLUS_3                           6                             4
  CLUS_4                           7                             6
  CLUS_5                          10                             3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(3P14.2) MUTATED       10     12      9      6
  DEL PEAK  3(3P14.2) WILD-TYPE      4      8      3      4
D28V3, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                          10                             4
  CLUS_2                          12                             8
  CLUS_3                           9                             3
  CLUS_4                           6                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  3(3P14.2) MUTATED        6      4      6      4      3      5
  DEL PEAK  3(3P14.2) WILD-TYPE      4      0      2      2      5      1
                               vv
clus                            CLUS_7
  DEL PEAK  3(3P14.2) MUTATED        9
  DEL PEAK  3(3P14.2) WILD-TYPE      5
D28V4, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                           6                             4
  CLUS_2                           4                             0
  CLUS_3                           6                             2
  CLUS_4                           4                             2
  CLUS_5                           3                             5
  CLUS_6                           5                             1
  CLUS_7                           9                             5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(3P14.2) MUTATED        7     14      4     12
  DEL PEAK  3(3P14.2) WILD-TYPE      3      8      0      7
D28V5, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                          14                             8
  CLUS_3                           4                             0
  CLUS_4                          12                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(3P14.2) MUTATED       16      5     13      3
  DEL PEAK  3(3P14.2) WILD-TYPE      7      3      5      3
D28V6, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                          16                             7
  CLUS_2                           5                             3
  CLUS_3                          13                             5
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(3P14.2) MUTATED        9     15     13
  DEL PEAK  3(3P14.2) WILD-TYPE      3      8      7
D28V7, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                           9                             3
  CLUS_2                          15                             8
  CLUS_3                          13                             7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(3P14.2) MUTATED       17      5     11      4
  DEL PEAK  3(3P14.2) WILD-TYPE      7      2      6      3
D28V8, multiclass
        clus
vv       DEL PEAK  3(3P14.2) MUTATED DEL PEAK  3(3P14.2) WILD-TYPE
  CLUS_1                          17                             7
  CLUS_2                           5                             2
  CLUS_3                          11                             6
  CLUS_4                           4                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = DEL PEAK  4(3Q13.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3Q13.31) MUTATED        4     10      8
  DEL PEAK  4(3Q13.31) WILD-TYPE     14     11      9
D29V1, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            4                             14
  CLUS_2                           10                             11
  CLUS_3                            8                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(3Q13.31) MUTATED        3      7      5      2      5
  DEL PEAK  4(3Q13.31) WILD-TYPE      8      2      5     11      8
D29V2, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            7                              2
  CLUS_3                            5                              5
  CLUS_4                            2                             11
  CLUS_5                            5                              8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(3Q13.31) MUTATED        5      7      5      5
  DEL PEAK  4(3Q13.31) WILD-TYPE      9     13      7      5
D29V3, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            5                              9
  CLUS_2                            7                             13
  CLUS_3                            5                              7
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  4(3Q13.31) MUTATED        2      4      5      3      3      2
  DEL PEAK  4(3Q13.31) WILD-TYPE      8      0      3      3      5      4
                                vv
clus                             CLUS_7
  DEL PEAK  4(3Q13.31) MUTATED        3
  DEL PEAK  4(3Q13.31) WILD-TYPE     11
D29V4, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            2                              8
  CLUS_2                            4                              0
  CLUS_3                            5                              3
  CLUS_4                            3                              3
  CLUS_5                            3                              5
  CLUS_6                            2                              4
  CLUS_7                            3                             11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(3Q13.31) MUTATED        4      9      1      8
  DEL PEAK  4(3Q13.31) WILD-TYPE      6     13      3     11
D29V5, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            9                             13
  CLUS_3                            1                              3
  CLUS_4                            8                             11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(3Q13.31) MUTATED       10      2      9      1
  DEL PEAK  4(3Q13.31) WILD-TYPE     13      6      9      5
D29V6, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            2                              6
  CLUS_3                            9                              9
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(3Q13.31) MUTATED        7      8      7
  DEL PEAK  4(3Q13.31) WILD-TYPE      5     15     13
D29V7, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                            7                              5
  CLUS_2                            8                             15
  CLUS_3                            7                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(3Q13.31) MUTATED       11      2      7      2
  DEL PEAK  4(3Q13.31) WILD-TYPE     13      5     10      5
D29V8, multiclass
        clus
vv       DEL PEAK  4(3Q13.31) MUTATED DEL PEAK  4(3Q13.31) WILD-TYPE
  CLUS_1                           11                             13
  CLUS_2                            2                              5
  CLUS_3                            7                             10
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = DEL PEAK  5(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4Q22.1) MUTATED       12     11     14
  DEL PEAK  5(4Q22.1) WILD-TYPE      6     10      3
D30V1, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                          12                             6
  CLUS_2                          11                            10
  CLUS_3                          14                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(4Q22.1) MUTATED       10      7      3      8      9
  DEL PEAK  5(4Q22.1) WILD-TYPE      1      2      7      5      4
D30V2, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                          10                             1
  CLUS_2                           7                             2
  CLUS_3                           3                             7
  CLUS_4                           8                             5
  CLUS_5                           9                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(4Q22.1) MUTATED       13      9      9      6
  DEL PEAK  5(4Q22.1) WILD-TYPE      1     11      3      4
D30V3, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                          13                             1
  CLUS_2                           9                            11
  CLUS_3                           9                             3
  CLUS_4                           6                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  5(4Q22.1) MUTATED        9      4      3      5      5      3
  DEL PEAK  5(4Q22.1) WILD-TYPE      1      0      5      1      3      3
                               vv
clus                            CLUS_7
  DEL PEAK  5(4Q22.1) MUTATED        8
  DEL PEAK  5(4Q22.1) WILD-TYPE      6
D30V4, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                           4                             0
  CLUS_3                           3                             5
  CLUS_4                           5                             1
  CLUS_5                           5                             3
  CLUS_6                           3                             3
  CLUS_7                           8                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(4Q22.1) MUTATED        9     18      2      8
  DEL PEAK  5(4Q22.1) WILD-TYPE      1      4      2     11
D30V5, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                          18                             4
  CLUS_3                           2                             2
  CLUS_4                           8                            11
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(4Q22.1) MUTATED       14      7     14      2
  DEL PEAK  5(4Q22.1) WILD-TYPE      9      1      4      4
D30V6, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                          14                             9
  CLUS_2                           7                             1
  CLUS_3                          14                             4
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(4Q22.1) MUTATED        9     19      9
  DEL PEAK  5(4Q22.1) WILD-TYPE      3      4     11
D30V7, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                           9                             3
  CLUS_2                          19                             4
  CLUS_3                           9                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(4Q22.1) MUTATED       15      6     14      2
  DEL PEAK  5(4Q22.1) WILD-TYPE      9      1      3      5
D30V8, multiclass
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  CLUS_1                          15                             9
  CLUS_2                           6                             1
  CLUS_3                          14                             3
  CLUS_4                           2                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = DEL PEAK  6(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q34.3) MUTATED       15      9     13
  DEL PEAK  6(4Q34.3) WILD-TYPE      3     12      4
D31V1, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          15                             3
  CLUS_2                           9                            12
  CLUS_3                          13                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(4Q34.3) MUTATED       10      8      3      7      9
  DEL PEAK  6(4Q34.3) WILD-TYPE      1      1      7      6      4
D31V2, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          10                             1
  CLUS_2                           8                             1
  CLUS_3                           3                             7
  CLUS_4                           7                             6
  CLUS_5                           9                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(4Q34.3) MUTATED       13      8      9      7
  DEL PEAK  6(4Q34.3) WILD-TYPE      1     12      3      3
D31V3, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          13                             1
  CLUS_2                           8                            12
  CLUS_3                           9                             3
  CLUS_4                           7                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  6(4Q34.3) MUTATED        9      4      3      6      4      3
  DEL PEAK  6(4Q34.3) WILD-TYPE      1      0      5      0      4      3
                               vv
clus                            CLUS_7
  DEL PEAK  6(4Q34.3) MUTATED        8
  DEL PEAK  6(4Q34.3) WILD-TYPE      6
D31V4, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                           4                             0
  CLUS_3                           3                             5
  CLUS_4                           6                             0
  CLUS_5                           4                             4
  CLUS_6                           3                             3
  CLUS_7                           8                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(4Q34.3) MUTATED       10     17      1      9
  DEL PEAK  6(4Q34.3) WILD-TYPE      0      5      3     10
D31V5, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          10                             0
  CLUS_2                          17                             5
  CLUS_3                           1                             3
  CLUS_4                           9                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(4Q34.3) MUTATED       15      7     13      2
  DEL PEAK  6(4Q34.3) WILD-TYPE      8      1      5      4
D31V6, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          15                             8
  CLUS_2                           7                             1
  CLUS_3                          13                             5
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(4Q34.3) MUTATED       11     18      8
  DEL PEAK  6(4Q34.3) WILD-TYPE      1      5     12
D31V7, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          11                             1
  CLUS_2                          18                             5
  CLUS_3                           8                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(4Q34.3) MUTATED       16      6     13      2
  DEL PEAK  6(4Q34.3) WILD-TYPE      8      1      4      5
D31V8, multiclass
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  CLUS_1                          16                             8
  CLUS_2                           6                             1
  CLUS_3                          13                             4
  CLUS_4                           2                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = DEL PEAK  7(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q12.1) MUTATED        9      8      9
  DEL PEAK  7(5Q12.1) WILD-TYPE      9     13      8
D32V1, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           9                             9
  CLUS_2                           8                            13
  CLUS_3                           9                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(5Q12.1) MUTATED        7      4      1      6      8
  DEL PEAK  7(5Q12.1) WILD-TYPE      4      5      9      7      5
D32V2, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           7                             4
  CLUS_2                           4                             5
  CLUS_3                           1                             9
  CLUS_4                           6                             7
  CLUS_5                           8                             5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(5Q12.1) MUTATED        8      7      6      5
  DEL PEAK  7(5Q12.1) WILD-TYPE      6     13      6      5
D32V3, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           8                             6
  CLUS_2                           7                            13
  CLUS_3                           6                             6
  CLUS_4                           5                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  7(5Q12.1) MUTATED        6      2      2      3      5      4
  DEL PEAK  7(5Q12.1) WILD-TYPE      4      2      6      3      3      2
                               vv
clus                            CLUS_7
  DEL PEAK  7(5Q12.1) MUTATED        4
  DEL PEAK  7(5Q12.1) WILD-TYPE     10
D32V4, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           6                             4
  CLUS_2                           2                             2
  CLUS_3                           2                             6
  CLUS_4                           3                             3
  CLUS_5                           5                             3
  CLUS_6                           4                             2
  CLUS_7                           4                            10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(5Q12.1) MUTATED        5     11      3      7
  DEL PEAK  7(5Q12.1) WILD-TYPE      5     11      1     12
D32V5, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           5                             5
  CLUS_2                          11                            11
  CLUS_3                           3                             1
  CLUS_4                           7                            12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(5Q12.1) MUTATED        9      4      8      5
  DEL PEAK  7(5Q12.1) WILD-TYPE     14      4     10      1
D32V6, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           9                            14
  CLUS_2                           4                             4
  CLUS_3                           8                            10
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(5Q12.1) MUTATED        8     11      7
  DEL PEAK  7(5Q12.1) WILD-TYPE      4     12     13
D32V7, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           8                             4
  CLUS_2                          11                            12
  CLUS_3                           7                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(5Q12.1) MUTATED        9      4      8      5
  DEL PEAK  7(5Q12.1) WILD-TYPE     15      3      9      2
D32V8, multiclass
        clus
vv       DEL PEAK  7(5Q12.1) MUTATED DEL PEAK  7(5Q12.1) WILD-TYPE
  CLUS_1                           9                            15
  CLUS_2                           4                             3
  CLUS_3                           8                             9
  CLUS_4                           5                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  8(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q26) MUTATED        2      3      5
  DEL PEAK  8(6Q26) WILD-TYPE     16     18     12
D33V1, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         2                          16
  CLUS_2                         3                          18
  CLUS_3                         5                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(6Q26) MUTATED        1      3      2      1      3
  DEL PEAK  8(6Q26) WILD-TYPE     10      6      8     12     10
D33V2, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         1                          10
  CLUS_2                         3                           6
  CLUS_3                         2                           8
  CLUS_4                         1                          12
  CLUS_5                         3                          10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(6Q26) MUTATED        2      1      4      3
  DEL PEAK  8(6Q26) WILD-TYPE     12     19      8      7
D33V3, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         2                          12
  CLUS_2                         1                          19
  CLUS_3                         4                           8
  CLUS_4                         3                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK  8(6Q26) MUTATED        1      1      2      1      2      2      1
  DEL PEAK  8(6Q26) WILD-TYPE      9      3      6      5      6      4     13
D33V4, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         1                           9
  CLUS_2                         1                           3
  CLUS_3                         2                           6
  CLUS_4                         1                           5
  CLUS_5                         2                           6
  CLUS_6                         2                           4
  CLUS_7                         1                          13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(6Q26) MUTATED        2      4      2      2
  DEL PEAK  8(6Q26) WILD-TYPE      8     18      2     17
D33V5, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         2                           8
  CLUS_2                         4                          18
  CLUS_3                         2                           2
  CLUS_4                         2                          17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(6Q26) MUTATED        5      0      5      0
  DEL PEAK  8(6Q26) WILD-TYPE     18      8     13      6
D33V6, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         5                          18
  CLUS_2                         0                           8
  CLUS_3                         5                          13
  CLUS_4                         0                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(6Q26) MUTATED        3      4      3
  DEL PEAK  8(6Q26) WILD-TYPE      9     19     17
D33V7, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         3                           9
  CLUS_2                         4                          19
  CLUS_3                         3                          17
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(6Q26) MUTATED        6      0      4      0
  DEL PEAK  8(6Q26) WILD-TYPE     18      7     13      7
D33V8, multiclass
        clus
vv       DEL PEAK  8(6Q26) MUTATED DEL PEAK  8(6Q26) WILD-TYPE
  CLUS_1                         6                          18
  CLUS_2                         0                           7
  CLUS_3                         4                          13
  CLUS_4                         0                           7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  9(7Q11.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(7Q11.22) MUTATED        3      4      5
  DEL PEAK  9(7Q11.22) WILD-TYPE     15     17     12
D34V1, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            3                             15
  CLUS_2                            4                             17
  CLUS_3                            5                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(7Q11.22) MUTATED        4      1      1      2      4
  DEL PEAK  9(7Q11.22) WILD-TYPE      7      8      9     11      9
D34V2, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            4                              7
  CLUS_2                            1                              8
  CLUS_3                            1                              9
  CLUS_4                            2                             11
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(7Q11.22) MUTATED        4      4      3      1
  DEL PEAK  9(7Q11.22) WILD-TYPE     10     16      9      9
D34V3, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            4                             16
  CLUS_3                            3                              9
  CLUS_4                            1                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK  9(7Q11.22) MUTATED        4      0      2      1      1      1
  DEL PEAK  9(7Q11.22) WILD-TYPE      6      4      6      5      7      5
                                vv
clus                             CLUS_7
  DEL PEAK  9(7Q11.22) MUTATED        3
  DEL PEAK  9(7Q11.22) WILD-TYPE     11
D34V4, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            0                              4
  CLUS_3                            2                              6
  CLUS_4                            1                              5
  CLUS_5                            1                              7
  CLUS_6                            1                              5
  CLUS_7                            3                             11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(7Q11.22) MUTATED        2      6      0      4
  DEL PEAK  9(7Q11.22) WILD-TYPE      8     16      4     15
D34V5, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            2                              8
  CLUS_2                            6                             16
  CLUS_3                            0                              4
  CLUS_4                            4                             15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(7Q11.22) MUTATED        4      3      3      2
  DEL PEAK  9(7Q11.22) WILD-TYPE     19      5     15      4
D34V6, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            4                             19
  CLUS_2                            3                              5
  CLUS_3                            3                             15
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(7Q11.22) MUTATED        2      6      4
  DEL PEAK  9(7Q11.22) WILD-TYPE     10     17     16
D34V7, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            2                             10
  CLUS_2                            6                             17
  CLUS_3                            4                             16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(7Q11.22) MUTATED        4      2      4      2
  DEL PEAK  9(7Q11.22) WILD-TYPE     20      5     13      5
D34V8, multiclass
        clus
vv       DEL PEAK  9(7Q11.22) MUTATED DEL PEAK  9(7Q11.22) WILD-TYPE
  CLUS_1                            4                             20
  CLUS_2                            2                              5
  CLUS_3                            4                             13
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK 10(7Q36.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(7Q36.2) MUTATED        7      5      8
  DEL PEAK 10(7Q36.2) WILD-TYPE     11     16      9
D35V1, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           7                            11
  CLUS_2                           5                            16
  CLUS_3                           8                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(7Q36.2) MUTATED        6      4      1      3      6
  DEL PEAK 10(7Q36.2) WILD-TYPE      5      5      9     10      7
D35V2, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           6                             5
  CLUS_2                           4                             5
  CLUS_3                           1                             9
  CLUS_4                           3                            10
  CLUS_5                           6                             7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(7Q36.2) MUTATED        7      5      4      4
  DEL PEAK 10(7Q36.2) WILD-TYPE      7     15      8      6
D35V3, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           7                             7
  CLUS_2                           5                            15
  CLUS_3                           4                             8
  CLUS_4                           4                             6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 10(7Q36.2) MUTATED        7      0      2      2      3      2
  DEL PEAK 10(7Q36.2) WILD-TYPE      3      4      6      4      5      4
                               vv
clus                            CLUS_7
  DEL PEAK 10(7Q36.2) MUTATED        4
  DEL PEAK 10(7Q36.2) WILD-TYPE     10
D35V4, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                           0                             4
  CLUS_3                           2                             6
  CLUS_4                           2                             4
  CLUS_5                           3                             5
  CLUS_6                           2                             4
  CLUS_7                           4                            10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(7Q36.2) MUTATED        2     11      1      6
  DEL PEAK 10(7Q36.2) WILD-TYPE      8     11      3     13
D35V5, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           2                             8
  CLUS_2                          11                            11
  CLUS_3                           1                             3
  CLUS_4                           6                            13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(7Q36.2) MUTATED        5      6      6      3
  DEL PEAK 10(7Q36.2) WILD-TYPE     18      2     12      3
D35V6, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           5                            18
  CLUS_2                           6                             2
  CLUS_3                           6                            12
  CLUS_4                           3                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(7Q36.2) MUTATED        4     11      5
  DEL PEAK 10(7Q36.2) WILD-TYPE      8     12     15
D35V7, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           4                             8
  CLUS_2                          11                            12
  CLUS_3                           5                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(7Q36.2) MUTATED        5      5      7      3
  DEL PEAK 10(7Q36.2) WILD-TYPE     19      2     10      4
D35V8, multiclass
        clus
vv       DEL PEAK 10(7Q36.2) MUTATED DEL PEAK 10(7Q36.2) WILD-TYPE
  CLUS_1                           5                            19
  CLUS_2                           5                             2
  CLUS_3                           7                            10
  CLUS_4                           3                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK 11(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(8P23.2) MUTATED       13      6     14
  DEL PEAK 11(8P23.2) WILD-TYPE      5     15      3
D36V1, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                          13                             5
  CLUS_2                           6                            15
  CLUS_3                          14                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(8P23.2) MUTATED        9      6      5      6      7
  DEL PEAK 11(8P23.2) WILD-TYPE      2      3      5      7      6
D36V2, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                           9                             2
  CLUS_2                           6                             3
  CLUS_3                           5                             5
  CLUS_4                           6                             7
  CLUS_5                           7                             6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(8P23.2) MUTATED       11     10      7      5
  DEL PEAK 11(8P23.2) WILD-TYPE      3     10      5      5
D36V3, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                          11                             3
  CLUS_2                          10                            10
  CLUS_3                           7                             5
  CLUS_4                           5                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 11(8P23.2) MUTATED        9      2      4      4      3      3
  DEL PEAK 11(8P23.2) WILD-TYPE      1      2      4      2      5      3
                               vv
clus                            CLUS_7
  DEL PEAK 11(8P23.2) MUTATED        8
  DEL PEAK 11(8P23.2) WILD-TYPE      6
D36V4, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                           9                             1
  CLUS_2                           2                             2
  CLUS_3                           4                             4
  CLUS_4                           4                             2
  CLUS_5                           3                             5
  CLUS_6                           3                             3
  CLUS_7                           8                             6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(8P23.2) MUTATED        7     14      2     10
  DEL PEAK 11(8P23.2) WILD-TYPE      3      8      2      9
D36V5, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                          14                             8
  CLUS_3                           2                             2
  CLUS_4                          10                             9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(8P23.2) MUTATED       12      7     10      4
  DEL PEAK 11(8P23.2) WILD-TYPE     11      1      8      2
D36V6, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                          12                            11
  CLUS_2                           7                             1
  CLUS_3                          10                             8
  CLUS_4                           4                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(8P23.2) MUTATED        8     15     10
  DEL PEAK 11(8P23.2) WILD-TYPE      4      8     10
D36V7, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                           8                             4
  CLUS_2                          15                             8
  CLUS_3                          10                            10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(8P23.2) MUTATED       13      6     10      4
  DEL PEAK 11(8P23.2) WILD-TYPE     11      1      7      3
D36V8, multiclass
        clus
vv       DEL PEAK 11(8P23.2) MUTATED DEL PEAK 11(8P23.2) WILD-TYPE
  CLUS_1                          13                            11
  CLUS_2                           6                             1
  CLUS_3                          10                             7
  CLUS_4                           4                             3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK 12(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(9P23) MUTATED       13     10     11
  DEL PEAK 12(9P23) WILD-TYPE      5     11      6
D37V1, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                        13                           5
  CLUS_2                        10                          11
  CLUS_3                        11                           6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(9P23) MUTATED       10      4      4      8      8
  DEL PEAK 12(9P23) WILD-TYPE      1      5      6      5      5
D37V2, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                        10                           1
  CLUS_2                         4                           5
  CLUS_3                         4                           6
  CLUS_4                         8                           5
  CLUS_5                         8                           5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(9P23) MUTATED        9     11      9      5
  DEL PEAK 12(9P23) WILD-TYPE      5      9      3      5
D37V3, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                         9                           5
  CLUS_2                        11                           9
  CLUS_3                         9                           3
  CLUS_4                         5                           5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 12(9P23) MUTATED        8      1      4      5      3      4      9
  DEL PEAK 12(9P23) WILD-TYPE      2      3      4      1      5      2      5
D37V4, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                         8                           2
  CLUS_2                         1                           3
  CLUS_3                         4                           4
  CLUS_4                         5                           1
  CLUS_5                         3                           5
  CLUS_6                         4                           2
  CLUS_7                         9                           5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(9P23) MUTATED        4     14      3     13
  DEL PEAK 12(9P23) WILD-TYPE      6      8      1      6
D37V5, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                         4                           6
  CLUS_2                        14                           8
  CLUS_3                         3                           1
  CLUS_4                        13                           6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(9P23) MUTATED       13      7     11      3
  DEL PEAK 12(9P23) WILD-TYPE     10      1      7      3
D37V6, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                        13                          10
  CLUS_2                         7                           1
  CLUS_3                        11                           7
  CLUS_4                         3                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(9P23) MUTATED        6     16     12
  DEL PEAK 12(9P23) WILD-TYPE      6      7      8
D37V7, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                         6                           6
  CLUS_2                        16                           7
  CLUS_3                        12                           8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(9P23) MUTATED       14      7     10      3
  DEL PEAK 12(9P23) WILD-TYPE     10      0      7      4
D37V8, multiclass
        clus
vv       DEL PEAK 12(9P23) MUTATED DEL PEAK 12(9P23) WILD-TYPE
  CLUS_1                        14                          10
  CLUS_2                         7                           0
  CLUS_3                        10                           7
  CLUS_4                         3                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK 13(9Q21.13) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(9Q21.13) MUTATED       14     12     13
  DEL PEAK 13(9Q21.13) WILD-TYPE      4      9      4
D38V1, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                           14                              4
  CLUS_2                           12                              9
  CLUS_3                           13                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(9Q21.13) MUTATED        9      5      5     11      9
  DEL PEAK 13(9Q21.13) WILD-TYPE      2      4      5      2      4
D38V2, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                            9                              2
  CLUS_2                            5                              4
  CLUS_3                            5                              5
  CLUS_4                           11                              2
  CLUS_5                            9                              4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(9Q21.13) MUTATED       12     15      7      5
  DEL PEAK 13(9Q21.13) WILD-TYPE      2      5      5      5
D38V3, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                           12                              2
  CLUS_2                           15                              5
  CLUS_3                            7                              5
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 13(9Q21.13) MUTATED        9      2      5      4      4      3
  DEL PEAK 13(9Q21.13) WILD-TYPE      1      2      3      2      4      3
                                vv
clus                             CLUS_7
  DEL PEAK 13(9Q21.13) MUTATED       12
  DEL PEAK 13(9Q21.13) WILD-TYPE      2
D38V4, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                            2                              2
  CLUS_3                            5                              3
  CLUS_4                            4                              2
  CLUS_5                            4                              4
  CLUS_6                            3                              3
  CLUS_7                           12                              2
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(9Q21.13) MUTATED        8     14      2     15
  DEL PEAK 13(9Q21.13) WILD-TYPE      2      8      2      4
D38V5, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                           14                              8
  CLUS_3                            2                              2
  CLUS_4                           15                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(9Q21.13) MUTATED       18      7     10      4
  DEL PEAK 13(9Q21.13) WILD-TYPE      5      1      8      2
D38V6, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                           18                              5
  CLUS_2                            7                              1
  CLUS_3                           10                              8
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(9Q21.13) MUTATED        9     15     15
  DEL PEAK 13(9Q21.13) WILD-TYPE      3      8      5
D38V7, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                            9                              3
  CLUS_2                           15                              8
  CLUS_3                           15                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(9Q21.13) MUTATED       19      6     10      4
  DEL PEAK 13(9Q21.13) WILD-TYPE      5      1      7      3
D38V8, multiclass
        clus
vv       DEL PEAK 13(9Q21.13) MUTATED DEL PEAK 13(9Q21.13) WILD-TYPE
  CLUS_1                           19                              5
  CLUS_2                            6                              1
  CLUS_3                           10                              7
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK 14(9Q33.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9Q33.3) MUTATED       13     13     13
  DEL PEAK 14(9Q33.3) WILD-TYPE      5      8      4
D39V1, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          13                             5
  CLUS_2                          13                             8
  CLUS_3                          13                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(9Q33.3) MUTATED       11      5      5      9      9
  DEL PEAK 14(9Q33.3) WILD-TYPE      0      4      5      4      4
D39V2, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          11                             0
  CLUS_2                           5                             4
  CLUS_3                           5                             5
  CLUS_4                           9                             4
  CLUS_5                           9                             4
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(9Q33.3) MUTATED       13     13      8      5
  DEL PEAK 14(9Q33.3) WILD-TYPE      1      7      4      5
D39V3, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          13                             1
  CLUS_2                          13                             7
  CLUS_3                           8                             4
  CLUS_4                           5                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 14(9Q33.3) MUTATED       10      2      5      5      4      3
  DEL PEAK 14(9Q33.3) WILD-TYPE      0      2      3      1      4      3
                               vv
clus                            CLUS_7
  DEL PEAK 14(9Q33.3) MUTATED       10
  DEL PEAK 14(9Q33.3) WILD-TYPE      4
D39V4, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          10                             0
  CLUS_2                           2                             2
  CLUS_3                           5                             3
  CLUS_4                           5                             1
  CLUS_5                           4                             4
  CLUS_6                           3                             3
  CLUS_7                          10                             4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(9Q33.3) MUTATED        7     15      3     14
  DEL PEAK 14(9Q33.3) WILD-TYPE      3      7      1      5
D39V5, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                           7                             3
  CLUS_2                          15                             7
  CLUS_3                           3                             1
  CLUS_4                          14                             5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(9Q33.3) MUTATED       16      8     10      5
  DEL PEAK 14(9Q33.3) WILD-TYPE      7      0      8      1
D39V6, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          16                             7
  CLUS_2                           8                             0
  CLUS_3                          10                             8
  CLUS_4                           5                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(9Q33.3) MUTATED        9     16     14
  DEL PEAK 14(9Q33.3) WILD-TYPE      3      7      6
D39V7, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                           9                             3
  CLUS_2                          16                             7
  CLUS_3                          14                             6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(9Q33.3) MUTATED       17      7     10      5
  DEL PEAK 14(9Q33.3) WILD-TYPE      7      0      7      2
D39V8, multiclass
        clus
vv       DEL PEAK 14(9Q33.3) MUTATED DEL PEAK 14(9Q33.3) WILD-TYPE
  CLUS_1                          17                             7
  CLUS_2                           7                             0
  CLUS_3                          10                             7
  CLUS_4                           5                             2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK 15(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(10Q23.31) MUTATED        9      8      3
  DEL PEAK 15(10Q23.31) WILD-TYPE      9     13     14
D40V1, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             9                               9
  CLUS_2                             8                              13
  CLUS_3                             3                              14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(10Q23.31) MUTATED        5      5      3      6      1
  DEL PEAK 15(10Q23.31) WILD-TYPE      6      4      7      7     12
D40V2, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             5                               6
  CLUS_2                             5                               4
  CLUS_3                             3                               7
  CLUS_4                             6                               7
  CLUS_5                             1                              12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(10Q23.31) MUTATED        5      9      1      5
  DEL PEAK 15(10Q23.31) WILD-TYPE      9     11     11      5
D40V3, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             5                               9
  CLUS_2                             9                              11
  CLUS_3                             1                              11
  CLUS_4                             5                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 15(10Q23.31) MUTATED        3      3      4      1      3      0
  DEL PEAK 15(10Q23.31) WILD-TYPE      7      1      4      5      5      6
                                 vv
clus                              CLUS_7
  DEL PEAK 15(10Q23.31) MUTATED        6
  DEL PEAK 15(10Q23.31) WILD-TYPE      8
D40V4, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             3                               7
  CLUS_2                             3                               1
  CLUS_3                             4                               4
  CLUS_4                             1                               5
  CLUS_5                             3                               5
  CLUS_6                             0                               6
  CLUS_7                             6                               8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(10Q23.31) MUTATED        5      7      1      7
  DEL PEAK 15(10Q23.31) WILD-TYPE      5     15      3     12
D40V5, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             5                               5
  CLUS_2                             7                              15
  CLUS_3                             1                               3
  CLUS_4                             7                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(10Q23.31) MUTATED       10      2      6      2
  DEL PEAK 15(10Q23.31) WILD-TYPE     13      6     12      4
D40V6, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                            10                              13
  CLUS_2                             2                               6
  CLUS_3                             6                              12
  CLUS_4                             2                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(10Q23.31) MUTATED        5      7      8
  DEL PEAK 15(10Q23.31) WILD-TYPE      7     16     12
D40V7, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                             5                               7
  CLUS_2                             7                              16
  CLUS_3                             8                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(10Q23.31) MUTATED       10      2      5      3
  DEL PEAK 15(10Q23.31) WILD-TYPE     14      5     12      4
D40V8, multiclass
        clus
vv       DEL PEAK 15(10Q23.31) MUTATED DEL PEAK 15(10Q23.31) WILD-TYPE
  CLUS_1                            10                              14
  CLUS_2                             2                               5
  CLUS_3                             5                              12
  CLUS_4                             3                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK 16(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(11P15.5) MUTATED        8     11      6
  DEL PEAK 16(11P15.5) WILD-TYPE     10     10     11
D41V1, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                           11                             10
  CLUS_3                            6                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(11P15.5) MUTATED        6      4      4      4      7
  DEL PEAK 16(11P15.5) WILD-TYPE      5      5      6      9      6
D41V2, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            4                              5
  CLUS_3                            4                              6
  CLUS_4                            4                              9
  CLUS_5                            7                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(11P15.5) MUTATED        7      8      6      4
  DEL PEAK 16(11P15.5) WILD-TYPE      7     12      6      6
D41V3, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            7                              7
  CLUS_2                            8                             12
  CLUS_3                            6                              6
  CLUS_4                            4                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 16(11P15.5) MUTATED        5      2      4      2      3      4
  DEL PEAK 16(11P15.5) WILD-TYPE      5      2      4      4      5      2
                                vv
clus                             CLUS_7
  DEL PEAK 16(11P15.5) MUTATED        5
  DEL PEAK 16(11P15.5) WILD-TYPE      9
D41V4, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            2                              2
  CLUS_3                            4                              4
  CLUS_4                            2                              4
  CLUS_5                            3                              5
  CLUS_6                            4                              2
  CLUS_7                            5                              9
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(11P15.5) MUTATED        4     12      2      7
  DEL PEAK 16(11P15.5) WILD-TYPE      6     10      2     12
D41V5, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                           12                             10
  CLUS_3                            2                              2
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(11P15.5) MUTATED       10      4      9      2
  DEL PEAK 16(11P15.5) WILD-TYPE     13      4      9      4
D41V6, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            4                              4
  CLUS_3                            9                              9
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(11P15.5) MUTATED        6     11      8
  DEL PEAK 16(11P15.5) WILD-TYPE      6     12     12
D41V7, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                            6                              6
  CLUS_2                           11                             12
  CLUS_3                            8                             12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(11P15.5) MUTATED       10      4      8      3
  DEL PEAK 16(11P15.5) WILD-TYPE     14      3      9      4
D41V8, multiclass
        clus
vv       DEL PEAK 16(11P15.5) MUTATED DEL PEAK 16(11P15.5) WILD-TYPE
  CLUS_1                           10                             14
  CLUS_2                            4                              3
  CLUS_3                            8                              9
  CLUS_4                            3                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 17(11Q14.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(11Q14.1) MUTATED        8      8     10
  DEL PEAK 17(11Q14.1) WILD-TYPE     10     13      7
D42V1, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                            8                             13
  CLUS_3                           10                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(11Q14.1) MUTATED        3      7      3      6      7
  DEL PEAK 17(11Q14.1) WILD-TYPE      8      2      7      7      6
D42V2, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            7                              2
  CLUS_3                            3                              7
  CLUS_4                            6                              7
  CLUS_5                            7                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(11Q14.1) MUTATED        6      9      6      5
  DEL PEAK 17(11Q14.1) WILD-TYPE      8     11      6      5
D42V3, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            9                             11
  CLUS_3                            6                              6
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 17(11Q14.1) MUTATED        4      3      3      3      3      3
  DEL PEAK 17(11Q14.1) WILD-TYPE      6      1      5      3      5      3
                                vv
clus                             CLUS_7
  DEL PEAK 17(11Q14.1) MUTATED        7
  DEL PEAK 17(11Q14.1) WILD-TYPE      7
D42V4, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                            3                              1
  CLUS_3                            3                              5
  CLUS_4                            3                              3
  CLUS_5                            3                              5
  CLUS_6                            3                              3
  CLUS_7                            7                              7
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(11Q14.1) MUTATED        4     14      1      7
  DEL PEAK 17(11Q14.1) WILD-TYPE      6      8      3     12
D42V5, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            4                              6
  CLUS_2                           14                              8
  CLUS_3                            1                              3
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(11Q14.1) MUTATED        8      3     11      4
  DEL PEAK 17(11Q14.1) WILD-TYPE     15      5      7      2
D42V6, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            8                             15
  CLUS_2                            3                              5
  CLUS_3                           11                              7
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(11Q14.1) MUTATED        5     14      7
  DEL PEAK 17(11Q14.1) WILD-TYPE      7      9     13
D42V7, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                           14                              9
  CLUS_3                            7                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(11Q14.1) MUTATED        8      2     12      4
  DEL PEAK 17(11Q14.1) WILD-TYPE     16      5      5      3
D42V8, multiclass
        clus
vv       DEL PEAK 17(11Q14.1) MUTATED DEL PEAK 17(11Q14.1) WILD-TYPE
  CLUS_1                            8                             16
  CLUS_2                            2                              5
  CLUS_3                           12                              5
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 18(11Q23.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11Q23.2) MUTATED        8     10      8
  DEL PEAK 18(11Q23.2) WILD-TYPE     10     11      9
D43V1, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                           10                             11
  CLUS_3                            8                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(11Q23.2) MUTATED        2      7      4      6      7
  DEL PEAK 18(11Q23.2) WILD-TYPE      9      2      6      7      6
D43V2, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            2                              9
  CLUS_2                            7                              2
  CLUS_3                            4                              6
  CLUS_4                            6                              7
  CLUS_5                            7                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(11Q23.2) MUTATED        6      7      6      7
  DEL PEAK 18(11Q23.2) WILD-TYPE      8     13      6      3
D43V3, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                            7                             13
  CLUS_3                            6                              6
  CLUS_4                            7                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 18(11Q23.2) MUTATED        3      3      4      3      4      3
  DEL PEAK 18(11Q23.2) WILD-TYPE      7      1      4      3      4      3
                                vv
clus                             CLUS_7
  DEL PEAK 18(11Q23.2) MUTATED        6
  DEL PEAK 18(11Q23.2) WILD-TYPE      8
D43V4, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            3                              7
  CLUS_2                            3                              1
  CLUS_3                            4                              4
  CLUS_4                            3                              3
  CLUS_5                            4                              4
  CLUS_6                            3                              3
  CLUS_7                            6                              8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(11Q23.2) MUTATED        5     13      2      6
  DEL PEAK 18(11Q23.2) WILD-TYPE      5      9      2     13
D43V5, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                           13                              9
  CLUS_3                            2                              2
  CLUS_4                            6                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(11Q23.2) MUTATED       10      3     10      3
  DEL PEAK 18(11Q23.2) WILD-TYPE     13      5      8      3
D43V6, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            3                              5
  CLUS_3                           10                              8
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(11Q23.2) MUTATED        6     13      7
  DEL PEAK 18(11Q23.2) WILD-TYPE      6     10     13
D43V7, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                            6                              6
  CLUS_2                           13                             10
  CLUS_3                            7                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(11Q23.2) MUTATED       10      2     11      3
  DEL PEAK 18(11Q23.2) WILD-TYPE     14      5      6      4
D43V8, multiclass
        clus
vv       DEL PEAK 18(11Q23.2) MUTATED DEL PEAK 18(11Q23.2) WILD-TYPE
  CLUS_1                           10                             14
  CLUS_2                            2                              5
  CLUS_3                           11                              6
  CLUS_4                            3                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 19(12Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12Q23.1) MUTATED        6      7      7
  DEL PEAK 19(12Q23.1) WILD-TYPE     12     14     10
D44V1, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            6                             12
  CLUS_2                            7                             14
  CLUS_3                            7                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(12Q23.1) MUTATED        3      3      4      6      4
  DEL PEAK 19(12Q23.1) WILD-TYPE      8      6      6      7      9
D44V2, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            3                              6
  CLUS_3                            4                              6
  CLUS_4                            6                              7
  CLUS_5                            4                              9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(12Q23.1) MUTATED        4      6      5      5
  DEL PEAK 19(12Q23.1) WILD-TYPE     10     14      7      5
D44V3, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            4                             10
  CLUS_2                            6                             14
  CLUS_3                            5                              7
  CLUS_4                            5                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 19(12Q23.1) MUTATED        2      1      4      2      4      3
  DEL PEAK 19(12Q23.1) WILD-TYPE      8      3      4      4      4      3
                                vv
clus                             CLUS_7
  DEL PEAK 19(12Q23.1) MUTATED        4
  DEL PEAK 19(12Q23.1) WILD-TYPE     10
D44V4, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            2                              8
  CLUS_2                            1                              3
  CLUS_3                            4                              4
  CLUS_4                            2                              4
  CLUS_5                            4                              4
  CLUS_6                            3                              3
  CLUS_7                            4                             10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(12Q23.1) MUTATED        3      8      2      7
  DEL PEAK 19(12Q23.1) WILD-TYPE      7     14      2     12
D44V5, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            3                              7
  CLUS_2                            8                             14
  CLUS_3                            2                              2
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(12Q23.1) MUTATED        6      2      9      3
  DEL PEAK 19(12Q23.1) WILD-TYPE     17      6      9      3
D44V6, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                            2                              6
  CLUS_3                            9                              9
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(12Q23.1) MUTATED        4      9      7
  DEL PEAK 19(12Q23.1) WILD-TYPE      8     14     13
D44V7, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            4                              8
  CLUS_2                            9                             14
  CLUS_3                            7                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(12Q23.1) MUTATED        7      2      7      4
  DEL PEAK 19(12Q23.1) WILD-TYPE     17      5     10      3
D44V8, multiclass
        clus
vv       DEL PEAK 19(12Q23.1) MUTATED DEL PEAK 19(12Q23.1) WILD-TYPE
  CLUS_1                            7                             17
  CLUS_2                            2                              5
  CLUS_3                            7                             10
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 20(12Q24.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q24.31) MUTATED        8      8      4
  DEL PEAK 20(12Q24.31) WILD-TYPE     10     13     13
D45V1, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             8                              10
  CLUS_2                             8                              13
  CLUS_3                             4                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(12Q24.31) MUTATED        5      3      4      3      5
  DEL PEAK 20(12Q24.31) WILD-TYPE      6      6      6     10      8
D45V2, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             5                               6
  CLUS_2                             3                               6
  CLUS_3                             4                               6
  CLUS_4                             3                              10
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(12Q24.31) MUTATED        6      4      7      3
  DEL PEAK 20(12Q24.31) WILD-TYPE      8     16      5      7
D45V3, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             6                               8
  CLUS_2                             4                              16
  CLUS_3                             7                               5
  CLUS_4                             3                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 20(12Q24.31) MUTATED        3      2      4      3      2      4
  DEL PEAK 20(12Q24.31) WILD-TYPE      7      2      4      3      6      2
                                 vv
clus                              CLUS_7
  DEL PEAK 20(12Q24.31) MUTATED        2
  DEL PEAK 20(12Q24.31) WILD-TYPE     12
D45V4, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             3                               7
  CLUS_2                             2                               2
  CLUS_3                             4                               4
  CLUS_4                             3                               3
  CLUS_5                             2                               6
  CLUS_6                             4                               2
  CLUS_7                             2                              12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(12Q24.31) MUTATED        5      8      2      5
  DEL PEAK 20(12Q24.31) WILD-TYPE      5     14      2     14
D45V5, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             5                               5
  CLUS_2                             8                              14
  CLUS_3                             2                               2
  CLUS_4                             5                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(12Q24.31) MUTATED        7      3      8      2
  DEL PEAK 20(12Q24.31) WILD-TYPE     16      5     10      4
D45V6, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             7                              16
  CLUS_2                             3                               5
  CLUS_3                             8                              10
  CLUS_4                             2                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(12Q24.31) MUTATED        6      9      5
  DEL PEAK 20(12Q24.31) WILD-TYPE      6     14     15
D45V7, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             6                               6
  CLUS_2                             9                              14
  CLUS_3                             5                              15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(12Q24.31) MUTATED        8      3      6      3
  DEL PEAK 20(12Q24.31) WILD-TYPE     16      4     11      4
D45V8, multiclass
        clus
vv       DEL PEAK 20(12Q24.31) MUTATED DEL PEAK 20(12Q24.31) WILD-TYPE
  CLUS_1                             8                              16
  CLUS_2                             3                               4
  CLUS_3                             6                              11
  CLUS_4                             3                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 21(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(13Q12.11) MUTATED        7     12     11
  DEL PEAK 21(13Q12.11) WILD-TYPE     11      9      6
D46V1, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             7                              11
  CLUS_2                            12                               9
  CLUS_3                            11                               6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(13Q12.11) MUTATED        2      7      6     10      5
  DEL PEAK 21(13Q12.11) WILD-TYPE      9      2      4      3      8
D46V2, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             2                               9
  CLUS_2                             7                               2
  CLUS_3                             6                               4
  CLUS_4                            10                               3
  CLUS_5                             5                               8
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(13Q12.11) MUTATED        5     12      6      7
  DEL PEAK 21(13Q12.11) WILD-TYPE      9      8      6      3
D46V3, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             5                               9
  CLUS_2                            12                               8
  CLUS_3                             6                               6
  CLUS_4                             7                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 21(13Q12.11) MUTATED        2      3      5      3      6      2
  DEL PEAK 21(13Q12.11) WILD-TYPE      8      1      3      3      2      4
                                 vv
clus                              CLUS_7
  DEL PEAK 21(13Q12.11) MUTATED        9
  DEL PEAK 21(13Q12.11) WILD-TYPE      5
D46V4, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             2                               8
  CLUS_2                             3                               1
  CLUS_3                             5                               3
  CLUS_4                             3                               3
  CLUS_5                             6                               2
  CLUS_6                             2                               4
  CLUS_7                             9                               5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(13Q12.11) MUTATED        6     10      3     11
  DEL PEAK 21(13Q12.11) WILD-TYPE      4     12      1      8
D46V5, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             6                               4
  CLUS_2                            10                              12
  CLUS_3                             3                               1
  CLUS_4                            11                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(13Q12.11) MUTATED       16      1     11      2
  DEL PEAK 21(13Q12.11) WILD-TYPE      7      7      7      4
D46V6, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                            16                               7
  CLUS_2                             1                               7
  CLUS_3                            11                               7
  CLUS_4                             2                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(13Q12.11) MUTATED        7     10     13
  DEL PEAK 21(13Q12.11) WILD-TYPE      5     13      7
D46V7, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                             7                               5
  CLUS_2                            10                              13
  CLUS_3                            13                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(13Q12.11) MUTATED       17      1      9      3
  DEL PEAK 21(13Q12.11) WILD-TYPE      7      6      8      4
D46V8, multiclass
        clus
vv       DEL PEAK 21(13Q12.11) MUTATED DEL PEAK 21(13Q12.11) WILD-TYPE
  CLUS_1                            17                               7
  CLUS_2                             1                               6
  CLUS_3                             9                               8
  CLUS_4                             3                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 22(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(13Q14.2) MUTATED        8     13     11
  DEL PEAK 22(13Q14.2) WILD-TYPE     10      8      6
D47V1, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                           13                              8
  CLUS_3                           11                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(13Q14.2) MUTATED        3      7      7     12      3
  DEL PEAK 22(13Q14.2) WILD-TYPE      8      2      3      1     10
D47V2, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            3                              8
  CLUS_2                            7                              2
  CLUS_3                            7                              3
  CLUS_4                           12                              1
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(13Q14.2) MUTATED        6     15      3      8
  DEL PEAK 22(13Q14.2) WILD-TYPE      8      5      9      2
D47V3, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            6                              8
  CLUS_2                           15                              5
  CLUS_3                            3                              9
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 22(13Q14.2) MUTATED        3      3      5      1      7      2
  DEL PEAK 22(13Q14.2) WILD-TYPE      7      1      3      5      1      4
                                vv
clus                             CLUS_7
  DEL PEAK 22(13Q14.2) MUTATED       11
  DEL PEAK 22(13Q14.2) WILD-TYPE      3
D47V4, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            3                              7
  CLUS_2                            3                              1
  CLUS_3                            5                              3
  CLUS_4                            1                              5
  CLUS_5                            7                              1
  CLUS_6                            2                              4
  CLUS_7                           11                              3
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(13Q14.2) MUTATED        6     10      3     13
  DEL PEAK 22(13Q14.2) WILD-TYPE      4     12      1      6
D47V5, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            6                              4
  CLUS_2                           10                             12
  CLUS_3                            3                              1
  CLUS_4                           13                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(13Q14.2) MUTATED       17      3      8      4
  DEL PEAK 22(13Q14.2) WILD-TYPE      6      5     10      2
D47V6, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                           17                              6
  CLUS_2                            3                              5
  CLUS_3                            8                             10
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(13Q14.2) MUTATED        6     10     16
  DEL PEAK 22(13Q14.2) WILD-TYPE      6     13      4
D47V7, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                            6                              6
  CLUS_2                           10                             13
  CLUS_3                           16                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(13Q14.2) MUTATED       17      3      7      5
  DEL PEAK 22(13Q14.2) WILD-TYPE      7      4     10      2
D47V8, multiclass
        clus
vv       DEL PEAK 22(13Q14.2) MUTATED DEL PEAK 22(13Q14.2) WILD-TYPE
  CLUS_1                           17                              7
  CLUS_2                            3                              4
  CLUS_3                            7                             10
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 23(14Q21.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(14Q21.1) MUTATED        8     11      9
  DEL PEAK 23(14Q21.1) WILD-TYPE     10     10      8
D48V1, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                            8                             10
  CLUS_2                           11                             10
  CLUS_3                            9                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(14Q21.1) MUTATED        8      5      5      2      8
  DEL PEAK 23(14Q21.1) WILD-TYPE      3      4      5     11      5
D48V2, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                            8                              3
  CLUS_2                            5                              4
  CLUS_3                            5                              5
  CLUS_4                            2                             11
  CLUS_5                            8                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(14Q21.1) MUTATED       10      6      8      4
  DEL PEAK 23(14Q21.1) WILD-TYPE      4     14      4      6
D48V3, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                           10                              4
  CLUS_2                            6                             14
  CLUS_3                            8                              4
  CLUS_4                            4                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 23(14Q21.1) MUTATED        8      2      5      4      2      4
  DEL PEAK 23(14Q21.1) WILD-TYPE      2      2      3      2      6      2
                                vv
clus                             CLUS_7
  DEL PEAK 23(14Q21.1) MUTATED        3
  DEL PEAK 23(14Q21.1) WILD-TYPE     11
D48V4, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                            2                              2
  CLUS_3                            5                              3
  CLUS_4                            4                              2
  CLUS_5                            2                              6
  CLUS_6                            4                              2
  CLUS_7                            3                             11
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(14Q21.1) MUTATED        7     12      2      7
  DEL PEAK 23(14Q21.1) WILD-TYPE      3     10      2     12
D48V5, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                           12                             10
  CLUS_3                            2                              2
  CLUS_4                            7                             12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(14Q21.1) MUTATED       10      6      8      4
  DEL PEAK 23(14Q21.1) WILD-TYPE     13      2     10      2
D48V6, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                           10                             13
  CLUS_2                            6                              2
  CLUS_3                            8                             10
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(14Q21.1) MUTATED        7     12      9
  DEL PEAK 23(14Q21.1) WILD-TYPE      5     11     11
D48V7, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                            7                              5
  CLUS_2                           12                             11
  CLUS_3                            9                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(14Q21.1) MUTATED       10      5      8      5
  DEL PEAK 23(14Q21.1) WILD-TYPE     14      2      9      2
D48V8, multiclass
        clus
vv       DEL PEAK 23(14Q21.1) MUTATED DEL PEAK 23(14Q21.1) WILD-TYPE
  CLUS_1                           10                             14
  CLUS_2                            5                              2
  CLUS_3                            8                              9
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 24(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(15Q11.2) MUTATED       14     14     13
  DEL PEAK 24(15Q11.2) WILD-TYPE      4      7      4
D49V1, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           14                              4
  CLUS_2                           14                              7
  CLUS_3                           13                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(15Q11.2) MUTATED       10      6      4     11     10
  DEL PEAK 24(15Q11.2) WILD-TYPE      1      3      6      2      3
D49V2, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           10                              1
  CLUS_2                            6                              3
  CLUS_3                            4                              6
  CLUS_4                           11                              2
  CLUS_5                           10                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(15Q11.2) MUTATED       12     14      9      6
  DEL PEAK 24(15Q11.2) WILD-TYPE      2      6      3      4
D49V3, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           12                              2
  CLUS_2                           14                              6
  CLUS_3                            9                              3
  CLUS_4                            6                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 24(15Q11.2) MUTATED        8      4      4      5      5      4
  DEL PEAK 24(15Q11.2) WILD-TYPE      2      0      4      1      3      2
                                vv
clus                             CLUS_7
  DEL PEAK 24(15Q11.2) MUTATED       11
  DEL PEAK 24(15Q11.2) WILD-TYPE      3
D49V4, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                            4                              0
  CLUS_3                            4                              4
  CLUS_4                            5                              1
  CLUS_5                            5                              3
  CLUS_6                            4                              2
  CLUS_7                           11                              3
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(15Q11.2) MUTATED       10     16      3     12
  DEL PEAK 24(15Q11.2) WILD-TYPE      0      6      1      7
D49V5, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           10                              0
  CLUS_2                           16                              6
  CLUS_3                            3                              1
  CLUS_4                           12                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(15Q11.2) MUTATED       18      6     13      4
  DEL PEAK 24(15Q11.2) WILD-TYPE      5      2      5      2
D49V6, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           18                              5
  CLUS_2                            6                              2
  CLUS_3                           13                              5
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(15Q11.2) MUTATED       11     16     14
  DEL PEAK 24(15Q11.2) WILD-TYPE      1      7      6
D49V7, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           11                              1
  CLUS_2                           16                              7
  CLUS_3                           14                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(15Q11.2) MUTATED       19      6     11      5
  DEL PEAK 24(15Q11.2) WILD-TYPE      5      1      6      2
D49V8, multiclass
        clus
vv       DEL PEAK 24(15Q11.2) MUTATED DEL PEAK 24(15Q11.2) WILD-TYPE
  CLUS_1                           19                              5
  CLUS_2                            6                              1
  CLUS_3                           11                              6
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 25(15Q15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       15     13     15
  DEL PEAK 25(15Q15.1) WILD-TYPE      3      8      2
D50V1, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           15                              3
  CLUS_2                           13                              8
  CLUS_3                           15                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(15Q15.1) MUTATED       11      8      5     11      8
  DEL PEAK 25(15Q15.1) WILD-TYPE      0      1      5      2      5
D50V2, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           11                              0
  CLUS_2                            8                              1
  CLUS_3                            5                              5
  CLUS_4                           11                              2
  CLUS_5                            8                              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(15Q15.1) MUTATED       13     14      8      8
  DEL PEAK 25(15Q15.1) WILD-TYPE      1      6      4      2
D50V3, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           13                              1
  CLUS_2                           14                              6
  CLUS_3                            8                              4
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 25(15Q15.1) MUTATED        9      4      5      5      6      4
  DEL PEAK 25(15Q15.1) WILD-TYPE      1      0      3      1      2      2
                                vv
clus                             CLUS_7
  DEL PEAK 25(15Q15.1) MUTATED       10
  DEL PEAK 25(15Q15.1) WILD-TYPE      4
D50V4, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                            4                              0
  CLUS_3                            5                              3
  CLUS_4                            5                              1
  CLUS_5                            6                              2
  CLUS_6                            4                              2
  CLUS_7                           10                              4
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(15Q15.1) MUTATED       10     18      3     12
  DEL PEAK 25(15Q15.1) WILD-TYPE      0      4      1      7
D50V5, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           10                              0
  CLUS_2                           18                              4
  CLUS_3                            3                              1
  CLUS_4                           12                              7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(15Q15.1) MUTATED       19      7     14      3
  DEL PEAK 25(15Q15.1) WILD-TYPE      4      1      4      3
D50V6, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           19                              4
  CLUS_2                            7                              1
  CLUS_3                           14                              4
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(15Q15.1) MUTATED       12     18     13
  DEL PEAK 25(15Q15.1) WILD-TYPE      0      5      7
D50V7, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           12                              0
  CLUS_2                           18                              5
  CLUS_3                           13                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(15Q15.1) MUTATED       20      7     12      4
  DEL PEAK 25(15Q15.1) WILD-TYPE      4      0      5      3
D50V8, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           20                              4
  CLUS_2                            7                              0
  CLUS_3                           12                              5
  CLUS_4                            4                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 26(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16P13.3) MUTATED       10     14      9
  DEL PEAK 26(16P13.3) WILD-TYPE      8      7      8
D51V1, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           10                              8
  CLUS_2                           14                              7
  CLUS_3                            9                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(16P13.3) MUTATED        6      7      5      9      6
  DEL PEAK 26(16P13.3) WILD-TYPE      5      2      5      4      7
D51V2, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            6                              5
  CLUS_2                            7                              2
  CLUS_3                            5                              5
  CLUS_4                            9                              4
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(16P13.3) MUTATED        9     12      5      7
  DEL PEAK 26(16P13.3) WILD-TYPE      5      8      7      3
D51V3, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            9                              5
  CLUS_2                           12                              8
  CLUS_3                            5                              7
  CLUS_4                            7                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 26(16P13.3) MUTATED        5      4      6      4      5      1
  DEL PEAK 26(16P13.3) WILD-TYPE      5      0      2      2      3      5
                                vv
clus                             CLUS_7
  DEL PEAK 26(16P13.3) MUTATED        8
  DEL PEAK 26(16P13.3) WILD-TYPE      6
D51V4, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                            4                              0
  CLUS_3                            6                              2
  CLUS_4                            4                              2
  CLUS_5                            5                              3
  CLUS_6                            1                              5
  CLUS_7                            8                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(16P13.3) MUTATED        7     15      1     10
  DEL PEAK 26(16P13.3) WILD-TYPE      3      7      3      9
D51V5, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                           15                              7
  CLUS_3                            1                              3
  CLUS_4                           10                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(16P13.3) MUTATED       13      3     13      4
  DEL PEAK 26(16P13.3) WILD-TYPE     10      5      5      2
D51V6, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           13                             10
  CLUS_2                            3                              5
  CLUS_3                           13                              5
  CLUS_4                            4                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(16P13.3) MUTATED        9     14     10
  DEL PEAK 26(16P13.3) WILD-TYPE      3      9     10
D51V7, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            9                              3
  CLUS_2                           14                              9
  CLUS_3                           10                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(16P13.3) MUTATED       14      3     11      5
  DEL PEAK 26(16P13.3) WILD-TYPE     10      4      6      2
D51V8, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           14                             10
  CLUS_2                            3                              4
  CLUS_3                           11                              6
  CLUS_4                            5                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 27(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(16Q23.1) MUTATED       11     15     13
  DEL PEAK 27(16Q23.1) WILD-TYPE      7      6      4
D52V1, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                           11                              7
  CLUS_2                           15                              6
  CLUS_3                           13                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(16Q23.1) MUTATED        8      8      8      8      7
  DEL PEAK 27(16Q23.1) WILD-TYPE      3      1      2      5      6
D52V2, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                            8                              3
  CLUS_2                            8                              1
  CLUS_3                            8                              2
  CLUS_4                            8                              5
  CLUS_5                            7                              6
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(16Q23.1) MUTATED       11     14      6      8
  DEL PEAK 27(16Q23.1) WILD-TYPE      3      6      6      2
D52V3, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                           11                              3
  CLUS_2                           14                              6
  CLUS_3                            6                              6
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 27(16Q23.1) MUTATED        7      4      7      4      6      2
  DEL PEAK 27(16Q23.1) WILD-TYPE      3      0      1      2      2      4
                                vv
clus                             CLUS_7
  DEL PEAK 27(16Q23.1) MUTATED        9
  DEL PEAK 27(16Q23.1) WILD-TYPE      5
D52V4, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                            4                              0
  CLUS_3                            7                              1
  CLUS_4                            4                              2
  CLUS_5                            6                              2
  CLUS_6                            2                              4
  CLUS_7                            9                              5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(16Q23.1) MUTATED        8     14      3     13
  DEL PEAK 27(16Q23.1) WILD-TYPE      2      8      1      6
D52V5, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                            8                              2
  CLUS_2                           14                              8
  CLUS_3                            3                              1
  CLUS_4                           13                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(16Q23.1) MUTATED       16      6     11      5
  DEL PEAK 27(16Q23.1) WILD-TYPE      7      2      7      1
D52V6, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                           16                              7
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(16Q23.1) MUTATED       11     14     13
  DEL PEAK 27(16Q23.1) WILD-TYPE      1      9      7
D52V7, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                           11                              1
  CLUS_2                           14                              9
  CLUS_3                           13                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(16Q23.1) MUTATED       17      5     10      6
  DEL PEAK 27(16Q23.1) WILD-TYPE      7      2      7      1
D52V8, multiclass
        clus
vv       DEL PEAK 27(16Q23.1) MUTATED DEL PEAK 27(16Q23.1) WILD-TYPE
  CLUS_1                           17                              7
  CLUS_2                            5                              2
  CLUS_3                           10                              7
  CLUS_4                            6                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 28(17P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17P13.1) MUTATED       16     13     13
  DEL PEAK 28(17P13.1) WILD-TYPE      2      8      4
D53V1, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           16                              2
  CLUS_2                           13                              8
  CLUS_3                           13                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(17P13.1) MUTATED       10      9      5      8     10
  DEL PEAK 28(17P13.1) WILD-TYPE      1      0      5      5      3
D53V2, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           10                              1
  CLUS_2                            9                              0
  CLUS_3                            5                              5
  CLUS_4                            8                              5
  CLUS_5                           10                              3
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(17P13.1) MUTATED       13     11      9      9
  DEL PEAK 28(17P13.1) WILD-TYPE      1      9      3      1
D53V3, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           13                              1
  CLUS_2                           11                              9
  CLUS_3                            9                              3
  CLUS_4                            9                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 28(17P13.1) MUTATED        9      4      5      5      7      4
  DEL PEAK 28(17P13.1) WILD-TYPE      1      0      3      1      1      2
                                vv
clus                             CLUS_7
  DEL PEAK 28(17P13.1) MUTATED        8
  DEL PEAK 28(17P13.1) WILD-TYPE      6
D53V4, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                            4                              0
  CLUS_3                            5                              3
  CLUS_4                            5                              1
  CLUS_5                            7                              1
  CLUS_6                            4                              2
  CLUS_7                            8                              6
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(17P13.1) MUTATED        9     19      3     11
  DEL PEAK 28(17P13.1) WILD-TYPE      1      3      1      8
D53V5, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                           19                              3
  CLUS_3                            3                              1
  CLUS_4                           11                              8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(17P13.1) MUTATED       17      8     14      3
  DEL PEAK 28(17P13.1) WILD-TYPE      6      0      4      3
D53V6, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           17                              6
  CLUS_2                            8                              0
  CLUS_3                           14                              4
  CLUS_4                            3                              3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(17P13.1) MUTATED       11     20     11
  DEL PEAK 28(17P13.1) WILD-TYPE      1      3      9
D53V7, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           11                              1
  CLUS_2                           20                              3
  CLUS_3                           11                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(17P13.1) MUTATED       18      7     14      3
  DEL PEAK 28(17P13.1) WILD-TYPE      6      0      3      4
D53V8, multiclass
        clus
vv       DEL PEAK 28(17P13.1) MUTATED DEL PEAK 28(17P13.1) WILD-TYPE
  CLUS_1                           18                              6
  CLUS_2                            7                              0
  CLUS_3                           14                              3
  CLUS_4                            3                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 29(17Q21.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(17Q21.32) MUTATED        4      6      9
  DEL PEAK 29(17Q21.32) WILD-TYPE     14     15      8
D54V1, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             4                              14
  CLUS_2                             6                              15
  CLUS_3                             9                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(17Q21.32) MUTATED        5      4      3      4      3
  DEL PEAK 29(17Q21.32) WILD-TYPE      6      5      7      9     10
D54V2, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             5                               6
  CLUS_2                             4                               5
  CLUS_3                             3                               7
  CLUS_4                             4                               9
  CLUS_5                             3                              10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(17Q21.32) MUTATED        8      6      2      3
  DEL PEAK 29(17Q21.32) WILD-TYPE      6     14     10      7
D54V3, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             8                               6
  CLUS_2                             6                              14
  CLUS_3                             2                              10
  CLUS_4                             3                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 29(17Q21.32) MUTATED        5      4      3      1      1      1
  DEL PEAK 29(17Q21.32) WILD-TYPE      5      0      5      5      7      5
                                 vv
clus                              CLUS_7
  DEL PEAK 29(17Q21.32) MUTATED        4
  DEL PEAK 29(17Q21.32) WILD-TYPE     10
D54V4, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             5                               5
  CLUS_2                             4                               0
  CLUS_3                             3                               5
  CLUS_4                             1                               5
  CLUS_5                             1                               7
  CLUS_6                             1                               5
  CLUS_7                             4                              10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(17Q21.32) MUTATED        6      5      1      7
  DEL PEAK 29(17Q21.32) WILD-TYPE      4     17      3     12
D54V5, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             6                               4
  CLUS_2                             5                              17
  CLUS_3                             1                               3
  CLUS_4                             7                              12
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(17Q21.32) MUTATED        9      4      3      3
  DEL PEAK 29(17Q21.32) WILD-TYPE     14      4     15      3
D54V6, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             9                              14
  CLUS_2                             4                               4
  CLUS_3                             3                              15
  CLUS_4                             3                               3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(17Q21.32) MUTATED        6      6      7
  DEL PEAK 29(17Q21.32) WILD-TYPE      6     17     13
D54V7, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             6                               6
  CLUS_2                             6                              17
  CLUS_3                             7                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(17Q21.32) MUTATED        9      3      4      3
  DEL PEAK 29(17Q21.32) WILD-TYPE     15      4     13      4
D54V8, multiclass
        clus
vv       DEL PEAK 29(17Q21.32) MUTATED DEL PEAK 29(17Q21.32) WILD-TYPE
  CLUS_1                             9                              15
  CLUS_2                             3                               4
  CLUS_3                             4                              13
  CLUS_4                             3                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 30(18Q22.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q22.2) MUTATED       11      8      7
  DEL PEAK 30(18Q22.2) WILD-TYPE      7     13     10
D55V1, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                           11                              7
  CLUS_2                            8                             13
  CLUS_3                            7                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(18Q22.2) MUTATED        7      5      5      3      6
  DEL PEAK 30(18Q22.2) WILD-TYPE      4      4      5     10      7
D55V2, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            7                              4
  CLUS_2                            5                              4
  CLUS_3                            5                              5
  CLUS_4                            3                             10
  CLUS_5                            6                              7
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(18Q22.2) MUTATED        8      7      7      4
  DEL PEAK 30(18Q22.2) WILD-TYPE      6     13      5      6
D55V3, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            8                              6
  CLUS_2                            7                             13
  CLUS_3                            7                              5
  CLUS_4                            4                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 30(18Q22.2) MUTATED        7      2      4      3      2      4
  DEL PEAK 30(18Q22.2) WILD-TYPE      3      2      4      3      6      2
                                vv
clus                             CLUS_7
  DEL PEAK 30(18Q22.2) MUTATED        4
  DEL PEAK 30(18Q22.2) WILD-TYPE     10
D55V4, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            7                              3
  CLUS_2                            2                              2
  CLUS_3                            4                              4
  CLUS_4                            3                              3
  CLUS_5                            2                              6
  CLUS_6                            4                              2
  CLUS_7                            4                             10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(18Q22.2) MUTATED        5     15      0      6
  DEL PEAK 30(18Q22.2) WILD-TYPE      5      7      4     13
D55V5, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            5                              5
  CLUS_2                           15                              7
  CLUS_3                            0                              4
  CLUS_4                            6                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(18Q22.2) MUTATED        7      6     11      2
  DEL PEAK 30(18Q22.2) WILD-TYPE     16      2      7      4
D55V6, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            7                             16
  CLUS_2                            6                              2
  CLUS_3                           11                              7
  CLUS_4                            2                              4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(18Q22.2) MUTATED        5     16      5
  DEL PEAK 30(18Q22.2) WILD-TYPE      7      7     15
D55V7, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            5                              7
  CLUS_2                           16                              7
  CLUS_3                            5                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(18Q22.2) MUTATED        7      5     12      2
  DEL PEAK 30(18Q22.2) WILD-TYPE     17      2      5      5
D55V8, multiclass
        clus
vv       DEL PEAK 30(18Q22.2) MUTATED DEL PEAK 30(18Q22.2) WILD-TYPE
  CLUS_1                            7                             17
  CLUS_2                            5                              2
  CLUS_3                           12                              5
  CLUS_4                            2                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 31(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       18     16     13
  DEL PEAK 31(19P13.3) WILD-TYPE      0      5      4
D56V1, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           18                              0
  CLUS_2                           16                              5
  CLUS_3                           13                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(19P13.3) MUTATED       10      9      7      8     13
  DEL PEAK 31(19P13.3) WILD-TYPE      1      0      3      5      0
D56V2, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           10                              1
  CLUS_2                            9                              0
  CLUS_3                            7                              3
  CLUS_4                            8                              5
  CLUS_5                           13                              0
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(19P13.3) MUTATED       13     14     12      8
  DEL PEAK 31(19P13.3) WILD-TYPE      1      6      0      2
D56V3, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           13                              1
  CLUS_2                           14                              6
  CLUS_3                           12                              0
  CLUS_4                            8                              2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 31(19P13.3) MUTATED        9      4      7      6      6      6
  DEL PEAK 31(19P13.3) WILD-TYPE      1      0      1      0      2      0
                                vv
clus                             CLUS_7
  DEL PEAK 31(19P13.3) MUTATED        9
  DEL PEAK 31(19P13.3) WILD-TYPE      5
D56V4, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                            4                              0
  CLUS_3                            7                              1
  CLUS_4                            6                              0
  CLUS_5                            6                              2
  CLUS_6                            6                              0
  CLUS_7                            9                              5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(19P13.3) MUTATED        9     22      3     13
  DEL PEAK 31(19P13.3) WILD-TYPE      1      0      1      6
D56V5, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                            9                              1
  CLUS_2                           22                              0
  CLUS_3                            3                              1
  CLUS_4                           13                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(19P13.3) MUTATED       17      7     18      5
  DEL PEAK 31(19P13.3) WILD-TYPE      6      1      0      1
D56V6, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           17                              6
  CLUS_2                            7                              1
  CLUS_3                           18                              0
  CLUS_4                            5                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(19P13.3) MUTATED       10     23     14
  DEL PEAK 31(19P13.3) WILD-TYPE      2      0      6
D56V7, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           10                              2
  CLUS_2                           23                              0
  CLUS_3                           14                              6
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(19P13.3) MUTATED       18      6     17      6
  DEL PEAK 31(19P13.3) WILD-TYPE      6      1      0      1
D56V8, multiclass
        clus
vv       DEL PEAK 31(19P13.3) MUTATED DEL PEAK 31(19P13.3) WILD-TYPE
  CLUS_1                           18                              6
  CLUS_2                            6                              1
  CLUS_3                           17                              0
  CLUS_4                            6                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 32(19Q13.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19Q13.33) MUTATED        8      5      4
  DEL PEAK 32(19Q13.33) WILD-TYPE     10     16     13
D57V1, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             8                              10
  CLUS_2                             5                              16
  CLUS_3                             4                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(19Q13.33) MUTATED        7      5      2      1      2
  DEL PEAK 32(19Q13.33) WILD-TYPE      4      4      8     12     11
D57V2, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             7                               4
  CLUS_2                             5                               4
  CLUS_3                             2                               8
  CLUS_4                             1                              12
  CLUS_5                             2                              11
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(19Q13.33) MUTATED        9      2      1      5
  DEL PEAK 32(19Q13.33) WILD-TYPE      5     18     11      5
D57V3, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             9                               5
  CLUS_2                             2                              18
  CLUS_3                             1                              11
  CLUS_4                             5                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 32(19Q13.33) MUTATED        7      2      2      1      3      0
  DEL PEAK 32(19Q13.33) WILD-TYPE      3      2      6      5      5      6
                                 vv
clus                              CLUS_7
  DEL PEAK 32(19Q13.33) MUTATED        2
  DEL PEAK 32(19Q13.33) WILD-TYPE     12
D57V4, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             7                               3
  CLUS_2                             2                               2
  CLUS_3                             2                               6
  CLUS_4                             1                               5
  CLUS_5                             3                               5
  CLUS_6                             0                               6
  CLUS_7                             2                              12
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(19Q13.33) MUTATED        5      8      1      3
  DEL PEAK 32(19Q13.33) WILD-TYPE      5     14      3     16
D57V5, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             5                               5
  CLUS_2                             8                              14
  CLUS_3                             1                               3
  CLUS_4                             3                              16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(19Q13.33) MUTATED        5      6      4      2
  DEL PEAK 32(19Q13.33) WILD-TYPE     18      2     14      4
D57V6, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             5                              18
  CLUS_2                             6                               2
  CLUS_3                             4                              14
  CLUS_4                             2                               4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(19Q13.33) MUTATED        4      9      4
  DEL PEAK 32(19Q13.33) WILD-TYPE      8     14     16
D57V7, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             4                               8
  CLUS_2                             9                              14
  CLUS_3                             4                              16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(19Q13.33) MUTATED        5      6      4      2
  DEL PEAK 32(19Q13.33) WILD-TYPE     19      1     13      5
D57V8, multiclass
        clus
vv       DEL PEAK 32(19Q13.33) MUTATED DEL PEAK 32(19Q13.33) WILD-TYPE
  CLUS_1                             5                              19
  CLUS_2                             6                               1
  CLUS_3                             4                              13
  CLUS_4                             2                               5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 33(20P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(20P12.1) MUTATED        2      5      2
  DEL PEAK 33(20P12.1) WILD-TYPE     16     16     15
D58V1, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            2                             16
  CLUS_2                            5                             16
  CLUS_3                            2                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(20P12.1) MUTATED        2      0      2      2      3
  DEL PEAK 33(20P12.1) WILD-TYPE      9      9      8     11     10
D58V2, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            2                              9
  CLUS_2                            0                              9
  CLUS_3                            2                              8
  CLUS_4                            2                             11
  CLUS_5                            3                             10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(20P12.1) MUTATED        2      2      4      1
  DEL PEAK 33(20P12.1) WILD-TYPE     12     18      8      9
D58V3, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            2                             12
  CLUS_2                            2                             18
  CLUS_3                            4                              8
  CLUS_4                            1                              9
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 33(20P12.1) MUTATED        1      0      2      2      1      2
  DEL PEAK 33(20P12.1) WILD-TYPE      9      4      6      4      7      4
                                vv
clus                             CLUS_7
  DEL PEAK 33(20P12.1) MUTATED        1
  DEL PEAK 33(20P12.1) WILD-TYPE     13
D58V4, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            1                              9
  CLUS_2                            0                              4
  CLUS_3                            2                              6
  CLUS_4                            2                              4
  CLUS_5                            1                              7
  CLUS_6                            2                              4
  CLUS_7                            1                             13
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(20P12.1) MUTATED        2      2      2      3
  DEL PEAK 33(20P12.1) WILD-TYPE      8     20      2     16
D58V5, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            2                              8
  CLUS_2                            2                             20
  CLUS_3                            2                              2
  CLUS_4                            3                             16
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(20P12.1) MUTATED        6      1      1      1
  DEL PEAK 33(20P12.1) WILD-TYPE     17      7     17      5
D58V6, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            6                             17
  CLUS_2                            1                              7
  CLUS_3                            1                             17
  CLUS_4                            1                              5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(20P12.1) MUTATED        2      2      5
  DEL PEAK 33(20P12.1) WILD-TYPE     10     21     15
D58V7, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            2                             10
  CLUS_2                            2                             21
  CLUS_3                            5                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(20P12.1) MUTATED        6      1      1      1
  DEL PEAK 33(20P12.1) WILD-TYPE     18      6     16      6
D58V8, multiclass
        clus
vv       DEL PEAK 33(20P12.1) MUTATED DEL PEAK 33(20P12.1) WILD-TYPE
  CLUS_1                            6                             18
  CLUS_2                            1                              6
  CLUS_3                            1                             16
  CLUS_4                            1                              6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 34(22Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(22Q13.31) MUTATED       13     17     10
  DEL PEAK 34(22Q13.31) WILD-TYPE      5      4      7
D59V1, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                            13                               5
  CLUS_2                            17                               4
  CLUS_3                            10                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(22Q13.31) MUTATED        7      8      6     11      8
  DEL PEAK 34(22Q13.31) WILD-TYPE      4      1      4      2      5
D59V2, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                             7                               4
  CLUS_2                             8                               1
  CLUS_3                             6                               4
  CLUS_4                            11                               2
  CLUS_5                             8                               5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.31) MUTATED        9     14      9      8
  DEL PEAK 34(22Q13.31) WILD-TYPE      5      6      3      2
D59V3, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                             9                               5
  CLUS_2                            14                               6
  CLUS_3                             9                               3
  CLUS_4                             8                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 34(22Q13.31) MUTATED        5      4      7      4      7      4
  DEL PEAK 34(22Q13.31) WILD-TYPE      5      0      1      2      1      2
                                 vv
clus                              CLUS_7
  DEL PEAK 34(22Q13.31) MUTATED        9
  DEL PEAK 34(22Q13.31) WILD-TYPE      5
D59V4, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                             5                               5
  CLUS_2                             4                               0
  CLUS_3                             7                               1
  CLUS_4                             4                               2
  CLUS_5                             7                               1
  CLUS_6                             4                               2
  CLUS_7                             9                               5
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.31) MUTATED        8     16      4     12
  DEL PEAK 34(22Q13.31) WILD-TYPE      2      6      0      7
D59V5, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                             8                               2
  CLUS_2                            16                               6
  CLUS_3                             4                               0
  CLUS_4                            12                               7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.31) MUTATED       17      4     15      4
  DEL PEAK 34(22Q13.31) WILD-TYPE      6      4      3      2
D59V6, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                            17                               6
  CLUS_2                             4                               4
  CLUS_3                            15                               3
  CLUS_4                             4                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(22Q13.31) MUTATED        8     17     15
  DEL PEAK 34(22Q13.31) WILD-TYPE      4      6      5
D59V7, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                             8                               4
  CLUS_2                            17                               6
  CLUS_3                            15                               5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(22Q13.31) MUTATED       17      4     14      5
  DEL PEAK 34(22Q13.31) WILD-TYPE      7      3      3      2
D59V8, multiclass
        clus
vv       DEL PEAK 34(22Q13.31) MUTATED DEL PEAK 34(22Q13.31) WILD-TYPE
  CLUS_1                            17                               7
  CLUS_2                             4                               3
  CLUS_3                            14                               3
  CLUS_4                             5                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 35(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(XP21.1) MUTATED        6      6      6
  DEL PEAK 35(XP21.1) WILD-TYPE     12     15     11
D60V1, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           6                            12
  CLUS_2                           6                            15
  CLUS_3                           6                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(XP21.1) MUTATED        2      5      2      5      4
  DEL PEAK 35(XP21.1) WILD-TYPE      9      4      8      8      9
D60V2, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           2                             9
  CLUS_2                           5                             4
  CLUS_3                           2                             8
  CLUS_4                           5                             8
  CLUS_5                           4                             9
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP21.1) MUTATED        6      6      3      3
  DEL PEAK 35(XP21.1) WILD-TYPE      8     14      9      7
D60V3, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           6                             8
  CLUS_2                           6                            14
  CLUS_3                           3                             9
  CLUS_4                           3                             7
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DEL PEAK 35(XP21.1) MUTATED        3      2      2      1      4      2
  DEL PEAK 35(XP21.1) WILD-TYPE      7      2      6      5      4      4
                               vv
clus                            CLUS_7
  DEL PEAK 35(XP21.1) MUTATED        4
  DEL PEAK 35(XP21.1) WILD-TYPE     10
D60V4, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           3                             7
  CLUS_2                           2                             2
  CLUS_3                           2                             6
  CLUS_4                           1                             5
  CLUS_5                           4                             4
  CLUS_6                           2                             4
  CLUS_7                           4                            10
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP21.1) MUTATED        5      7      2      4
  DEL PEAK 35(XP21.1) WILD-TYPE      5     15      2     15
D60V5, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           5                             5
  CLUS_2                           7                            15
  CLUS_3                           2                             2
  CLUS_4                           4                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP21.1) MUTATED        7      3      6      2
  DEL PEAK 35(XP21.1) WILD-TYPE     16      5     12      4
D60V6, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           7                            16
  CLUS_2                           3                             5
  CLUS_3                           6                            12
  CLUS_4                           2                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(XP21.1) MUTATED        4      8      6
  DEL PEAK 35(XP21.1) WILD-TYPE      8     15     14
D60V7, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           4                             8
  CLUS_2                           8                            15
  CLUS_3                           6                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(XP21.1) MUTATED        7      2      6      3
  DEL PEAK 35(XP21.1) WILD-TYPE     17      5     11      4
D60V8, multiclass
        clus
vv       DEL PEAK 35(XP21.1) MUTATED DEL PEAK 35(XP21.1) WILD-TYPE
  CLUS_1                           7                            17
  CLUS_2                           2                             5
  CLUS_3                           6                            11
  CLUS_4                           3                             4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 36(XQ25) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XQ25) MUTATED        9      8      6
  DEL PEAK 36(XQ25) WILD-TYPE      9     13     11
D61V1, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         9                           9
  CLUS_2                         8                          13
  CLUS_3                         6                          11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(XQ25) MUTATED        5      6      3      6      3
  DEL PEAK 36(XQ25) WILD-TYPE      6      3      7      7     10
D61V2, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         5                           6
  CLUS_2                         6                           3
  CLUS_3                         3                           7
  CLUS_4                         6                           7
  CLUS_5                         3                          10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ25) MUTATED        7      6      3      7
  DEL PEAK 36(XQ25) WILD-TYPE      7     14      9      3
D61V3, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         7                           7
  CLUS_2                         6                          14
  CLUS_3                         3                           9
  CLUS_4                         7                           3
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  DEL PEAK 36(XQ25) MUTATED        5      2      3      2      4      1      6
  DEL PEAK 36(XQ25) WILD-TYPE      5      2      5      4      4      5      8
D61V4, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         5                           5
  CLUS_2                         2                           2
  CLUS_3                         3                           5
  CLUS_4                         2                           4
  CLUS_5                         4                           4
  CLUS_6                         1                           5
  CLUS_7                         6                           8
[1] 7 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ25) MUTATED        5     10      2      6
  DEL PEAK 36(XQ25) WILD-TYPE      5     12      2     13
D61V5, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         5                           5
  CLUS_2                        10                          12
  CLUS_3                         2                           2
  CLUS_4                         6                          13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ25) MUTATED       10      5      6      2
  DEL PEAK 36(XQ25) WILD-TYPE     13      3     12      4
D61V6, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                        10                          13
  CLUS_2                         5                           3
  CLUS_3                         6                          12
  CLUS_4                         2                           4
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(XQ25) MUTATED        7     10      6
  DEL PEAK 36(XQ25) WILD-TYPE      5     13     14
D61V7, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                         7                           5
  CLUS_2                        10                          13
  CLUS_3                         6                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(XQ25) MUTATED       10      5      6      2
  DEL PEAK 36(XQ25) WILD-TYPE     14      2     11      5
D61V8, multiclass
        clus
vv       DEL PEAK 36(XQ25) MUTATED DEL PEAK 36(XQ25) WILD-TYPE
  CLUS_1                        10                          14
  CLUS_2                         5                           2
  CLUS_3                         6                          11
  CLUS_4                         2                           5
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
