"Sample"	"A_T_coord_clusters"	"G_C_coord_clusters"	"Non_coord_clusters"	"clusters"	"mutations"	"complex"	"insertions"	"deletions"	"indels"	"substitutions"	"bases"	"A_to_T"	"A_to_G"	"A_to_C"	"A"	"a"	"T_to_A"	"T_to_C"	"T_to_G"	"T"	"t"	"G_to_C"	"G_to_T"	"G_to_A"	"G"	"g"	"C_to_G"	"C_to_A"	"C_to_T"	"C"	"c"	"tCw_to_G"	"tCw_to_A"	"tCw_to_T"	"tCw"	"tcw"	"tCw_per_mut"	"tCw_per_C"	"tcw_per_c"	"enrich_tCw"	"freq_tCw"	"wGa_to_C"	"wGa_to_T"	"wGa_to_A"	"wGa"	"wga"	"wGa_per_mut"	"wGa_per_G"	"wga_per_g"	"enrich_wGa"	"freq_wGa"	"[tCw_to_G+tCw_to_T]_per_mut"	"tCw_to_G+tCw_to_T"	"[(C_to_G)+(C_to_T)]-[(tCw_to_G)+(tCw_to_T)]"	"tcw+wga"	"c-tcw"	"Fisher_p-value_tCw"	"BH_Fisher_p-value_tCw"	"bonferroni_Fisher_p-value_tCw"	"odds_ratio_tCw"	"95%_confidence_lower_tCw"	"95%_confidence_upper_tCw"	"APOBEC_enrich"	"tCw_to_G_enrich"	"Fisher_p-value_tCw_to_G"	"BH_Fisher_p-value_tCw_to_G"	"bonferroni_Fisher_p-value_tCw_to_G"	"odds_ratio_tCw_to_G"	"tCw_to_T_enrich"	"Fisher_p-value_tCw_to_T"	"BH_Fisher_p-value_tCw_to_T"	"bonferroni_Fisher_p-value_tCw_to_T"	"odds_ratio_tCw_to_T"	"p-value_GvT_skew"	"BH_p-value_GvT_skew"	"bonferroni_p-value_GvT_skew"	"non-APOBEC_mutations"	"non-APOBEC_substitutions"	"APOBEC_MutLoad_MinEstimate"
"TCGA-N5-A4R8-01A-11D-A28R-08"	0	0	0	0	59	0	0	3	3	56	2296	0	3	2	5	555	0	2	2	4	499	4	7	12	23	636	4	4	16	24	606	1	1	1	3	72	0.0508474576271186	0.125	0.118811881188119	1.05208333333333	0.0416666666666667	0	0	2	2	85	0.0338983050847458	0.0869565217391304	0.133647798742138	0.650639386189258	0.0235294117647059	0.0677966101694915	4	32	157	1085	0.684432375647938	1	1	0.863966137696487	0.275965308211248	Inf	0.878980891719745	0.988853503184713	0.6618671410067	0.967344283009792	1	0.987270880012044	0.847588717015469	0.705980666422224	1	1	0.829417289085583	0.523809523809524	1	1	55	52	0
"TCGA-N5-A4RA-01A-11D-A28R-08"	0	0	0	0	52	0	1	4	5	47	1927	2	3	3	8	475	0	1	1	2	388	0	5	10	15	511	3	2	17	22	553	0	0	0	0	58	0	0	0.104882459312839	0	0	0	0	0	0	57	0	0	0.111545988258317	0	0	0	0	30	115	949	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	52	47	0
"TCGA-N5-A4RD-01A-11D-A28R-08"	0	0	0	0	67	1	3	4	7	59	2419	2	4	1	7	594	3	2	1	6	606	3	2	15	20	636	2	2	22	26	583	1	0	7	8	82	0.119402985074627	0.307692307692308	0.14065180102916	2.18761726078799	0.0975609756097561	2	0	0	2	72	0.0298507462686567	0.1	0.113207547169811	0.883333333333333	0.0277777777777778	0.149253731343284	10	32	154	1065	0.0371121258701891	0.528847793650195	1	2.15942462182207	1.0612440341993	Inf	1.88466295609153	4.74935064935065	0.0170235550705701	0.168518365743319	0.970342639022496	10.3357199322312	1.497542997543	0.185858917437235	1	1	1.61290595351919	0.178895407997576	0.679802550390789	1	57	49	0
"TCGA-N5-A4RF-01A-11D-A28R-08"	0	0	0	0	86	0	5	4	9	77	3157	0	4	2	6	684	3	3	2	8	768	3	6	19	28	899	3	7	25	35	806	0	1	1	2	91	0.0232558139534884	0.0571428571428571	0.112903225806452	0.506122448979592	0.021978021978022	1	2	0	3	105	0.0348837209302326	0.107142857142857	0.116796440489433	0.91734693877551	0.0285714285714286	0.0232558139534884	2	48	196	1509	0.982620214416592	1	1	0.320927545729209	0.0550874831181102	Inf	0.347959183673469	1.44982993197279	0.520533080362526	0.930021130047733	1	1.53933073243622	0.197704081632653	0.995145653693479	1	1	0.179140646174035	1	1	1	84	75	0
"TCGA-N5-A4RJ-01A-11D-A28R-08"	0	0	0	0	69	0	0	4	4	65	2665	3	3	3	9	599	0	2	0	2	580	4	4	19	27	719	3	5	19	27	767	0	0	1	1	86	0.0144927536231884	0.037037037037037	0.112125162972621	0.330318690783807	0.0116279069767442	1	0	0	1	90	0.0144927536231884	0.037037037037037	0.125173852573018	0.295884773662551	0.0111111111111111	0.0289855072463768	2	43	176	1310	0.974926220505123	1	1	0.346357066112178	0.0592104745586388	Inf	0.375252525252525	1.20616883116883	0.587381766345937	0.930021130047733	1	1.24033530541429	0.222188995215311	0.991375261853304	1	1	0.201285686600472	1	1	1	67	63	0
"TCGA-N5-A4RM-01A-11D-A28R-08"	0	0	0	0	69	0	2	7	9	60	2460	0	2	1	3	544	1	1	3	5	549	4	3	18	25	670	5	7	15	27	697	2	1	0	3	78	0.0434782608695652	0.111111111111111	0.111908177905308	0.992877492877493	0.0384615384615385	1	0	1	2	80	0.0289855072463768	0.08	0.119402985074627	0.67	0.025	0.0579710144927536	4	38	158	1209	0.730919553388117	1	1	0.805577531617312	0.259503398301081	Inf	0.823990355635925	2.88396624472574	0.0776526851556372	0.368850254489277	1	3.82007195564965	0.262178749520522	0.982180062412962	1	1	0.23926662906774	0.523809523809524	1	1	65	56	0
"TCGA-N5-A4RN-01A-12D-A28R-08"	0	0	0	0	88	1	1	6	7	80	3280	3	7	1	11	762	3	4	5	12	806	4	6	20	30	895	2	8	17	27	817	2	1	2	5	106	0.0568181818181818	0.185185185185185	0.129742962056304	1.42732354996506	0.0471698113207547	1	0	2	3	121	0.0340909090909091	0.1	0.135195530726257	0.739669421487603	0.0247933884297521	0.0795454545454545	7	36	227	1485	0.346648277143188	1	1	1.27183588541922	0.55481901002799	Inf	1.2277430591128	3.77092511013216	0.0347534871032351	0.227788322327752	1	6.52974868873903	0.815335158947494	0.741148667881522	1	1	0.793048741357988	1	1	1	81	73	0
"TCGA-N5-A4RO-01A-11D-A28R-08"	0	0	0	0	66	0	1	3	4	62	2542	1	5	0	6	563	1	3	0	4	595	8	3	15	26	706	6	7	13	26	678	2	1	1	4	79	0.0606060606060606	0.153846153846154	0.116519174041298	1.32035053554041	0.0506329113924051	3	1	0	4	81	0.0606060606060606	0.153846153846154	0.114730878186969	1.34093067426401	0.0493827160493827	0.0909090909090909	6	36	160	1224	0.362489425549889	1	1	1.27476161537302	0.516345048623927	Inf	1.23571428571429	3.08928571428571	0.017738775341402	0.168518365743319	1	4.24325845294316	0.308928571428571	0.967441797892866	1	1	0.283492024511331	0.118881118881119	0.651583710407241	1	60	56	0
"TCGA-N5-A4RS-01A-11D-A28R-08"	0	0	0	0	38	0	1	7	8	30	1230	0	0	1	1	310	0	1	1	2	241	0	2	11	13	352	2	5	7	14	327	1	1	1	3	45	0.0789473684210526	0.214285714285714	0.137614678899083	1.55714285714286	0.0666666666666667	0	1	0	1	36	0.0263157894736842	0.0769230769230769	0.102272727272727	0.752136752136752	0.0277777777777778	0.0526315789473684	2	18	81	598	0.709330753186007	1	1	0.820521110467375	0.133559122861261	Inf	0.838271604938272	4.19135802469136	0.226479226051654	0.579434059601034	1	7.34508884463782	0.465706447187929	0.897995480971868	1	1	0.434659546204998	1	1	1	36	28	0
"TCGA-N5-A4RT-01A-11D-A28R-08"	0	0	0	0	114	3	1	6	7	104	4264	4	5	3	12	1036	2	2	7	11	968	10	11	21	42	1118	11	12	16	39	1142	2	1	3	6	142	0.0526315789473684	0.153846153846154	0.124343257443082	1.23726977248104	0.0422535211267606	3	1	3	7	142	0.0614035087719298	0.166666666666667	0.12701252236136	1.31220657276995	0.0492957746478873	0.0964912280701754	11	47	284	1976	0.110066099839289	1	1	1.6279967511185	0.851993381148169	Inf	1.50922778047596	1.89470154258887	0.116538135663416	0.442844915520981	1	2.17332934963869	1.29044537495242	0.321628412259073	1	1	1.34646383046264	1	1	1	103	93	0
"TCGA-N5-A4RU-01A-31D-A28R-08"	0	0	0	0	81	0	3	4	7	74	3034	2	4	3	9	720	1	5	1	7	682	7	8	12	27	777	8	7	16	31	855	0	3	2	5	107	0.0617283950617284	0.161290322580645	0.125146198830409	1.28881519445282	0.0467289719626168	3	1	1	5	93	0.0617283950617284	0.185185185185185	0.11969111969112	1.54719235364397	0.0537634408602151	0.0740740740740741	6	37	200	1432	0.4380612408179	1	1	1.16095265105553	0.472244425381754	Inf	1.13860465116279	1.632	0.278934682505205	0.635971076111867	1	1.78921803262524	0.874285714285714	0.684845452097599	1	1	0.859299852804819	1	1	1	75	68	0
"TCGA-N5-A4RV-01A-21D-A28R-08"	0	0	0	0	71	0	2	7	9	62	2542	4	4	5	13	584	3	1	2	6	581	6	6	11	23	666	5	3	12	20	711	1	0	0	1	80	0.0140845070422535	0.05	0.112517580872011	0.444375	0.0125	2	2	0	4	79	0.0563380281690141	0.173913043478261	0.118618618618619	1.46615299944964	0.0506329113924051	0.0422535211267606	3	31	159	1218	0.768568779735792	1	1	0.741467986269724	0.190253733099921	Inf	0.764150943396226	2.36192109777015	0.127576734983007	0.454492118376962	1	2.86948455069697	0	1	1	1	0	0.166666666666667	0.67857142857143	1	68	59	0
"TCGA-N5-A59E-01A-11D-A28R-08"	0	0	0	0	74	1	2	9	11	62	2542	3	3	2	8	576	1	0	3	4	632	4	6	14	24	652	11	5	10	26	682	4	1	1	6	98	0.0810810810810811	0.230769230769231	0.143695014662757	1.60596546310832	0.0612244897959184	2	2	0	4	84	0.0540540540540541	0.166666666666667	0.128834355828221	1.29365079365079	0.0476190476190476	0.0945945945945946	7	32	182	1152	0.283772568008369	1	1	1.38424678346742	0.597846416447569	Inf	1.31558185404339	2.93186813186813	0.011380812531573	0.168518365743319	0.648706314299661	4.21320901889275	0.30540293040293	0.969981154849174	1	1	0.275367600663978	0.0572755417956657	0.651583710407241	1	67	55	0
"TCGA-N5-A59F-01A-11D-A28R-08"	0	0	0	0	68	0	3	4	7	61	2501	0	5	0	5	578	3	2	1	6	560	4	5	18	27	663	2	7	14	23	700	1	0	1	2	89	0.0294117647058824	0.0869565217391304	0.127142857142857	0.683927699071812	0.0224719101123595	0	0	1	1	72	0.0147058823529412	0.037037037037037	0.108597285067873	0.341049382716049	0.0138888888888889	0.0441176470588235	3	35	161	1202	0.841514283553764	1	1	0.64010296334228	0.165160290055949	Inf	0.668355671788166	1.41097308488613	0.530989651196446	0.930021130047733	1	1.49265294621663	0.529114906832298	0.904458272989727	1	1	0.49791596683958	1	1	1	65	58	0
"TCGA-N6-A4V9-01A-11D-A28R-08"	0	0	0	0	47	0	0	4	4	43	1763	3	6	0	9	402	1	3	0	4	449	2	4	8	14	442	4	3	9	16	470	0	1	2	3	58	0.0638297872340425	0.1875	0.123404255319149	1.51939655172414	0.0517241379310345	0	1	0	1	63	0.0212765957446809	0.0714285714285714	0.142533936651584	0.501133786848073	0.0158730158730159	0.0425531914893617	2	21	121	791	0.828616543797724	1	1	0.6228573913286	0.102923026441871	Inf	0.655407833273446	0	1	1	1	0	0.886728245017015	0.681201018494884	1	1	0.871771009943451	0.428571428571429	1	1	45	41	0
"TCGA-N6-A4VC-01A-11D-A28R-08"	0	0	0	0	56	0	0	1	1	55	2255	1	6	2	9	530	2	8	1	11	534	1	2	16	19	573	4	4	8	16	618	0	0	0	0	70	0	0	0.113268608414239	0	0	0	0	0	0	60	0	0	0.104712041884817	0	0	0	0	29	130	1061	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	56	55	0
"TCGA-N6-A4VD-01A-11D-A28R-08"	0	0	0	0	105	1	3	8	11	93	3813	0	5	2	7	846	2	2	0	4	851	1	2	35	38	1046	1	5	38	44	1070	0	0	0	0	135	0	0	0.126168224299065	0	0	1	1	2	4	128	0.0380952380952381	0.105263157894737	0.122370936902486	0.860197368421053	0.03125	0.0285714285714286	3	72	263	1853	0.996500041585421	1	1	0.293673435170645	0.0777968853557141	Inf	0.321825095057034	4.02281368821293	0.233806725803926	0.579434059601034	1	7.0341502494281	0.220428147299339	0.999216375019178	1	1	0.198551035512436	1	1	1	102	90	0
"TCGA-N6-A4VE-01A-11D-A28R-08"	0	0	0	0	77	0	1	6	7	70	2870	3	3	5	11	702	4	5	2	11	688	9	9	10	28	752	4	7	9	20	728	0	1	1	2	87	0.025974025974026	0.1	0.119505494505495	0.836781609195402	0.0229885057471264	2	1	1	4	82	0.051948051948052	0.142857142857143	0.109042553191489	1.31010452961672	0.0487804878048781	0.051948051948052	4	28	169	1311	0.507518492814171	1	1	1.10808752895403	0.351725031819226	Inf	1.09467455621302	1.34729176149294	0.449000296829092	0.882517824802008	1	1.41006085360648	0.921831205232015	0.656683308235314	1	1	0.912677006288913	1	1	1	73	66	0
"TCGA-N6-A4VF-01A-31D-A28R-08"	0	0	0	0	55	0	2	4	6	49	2009	1	1	2	4	422	1	1	1	3	472	2	1	17	20	560	3	2	17	22	555	0	1	1	2	68	0.0363636363636364	0.0909090909090909	0.122522522522523	0.741978609625669	0.0294117647058824	0	0	2	2	58	0.0363636363636364	0.1	0.103571428571429	0.96551724137931	0.0344827586206897	0.0545454545454545	3	36	126	989	0.831421095017527	1	1	0.65430730125815	0.16854399933007	Inf	0.680708180708181	0	1	1	1	0	0.780812324929972	0.755331638491007	1	1	0.759765244060018	0.142857142857143	0.651583710407241	1	52	46	0
"TCGA-N6-A4VG-01A-31D-A28R-08"	0	0	0	0	60	1	0	4	4	55	2255	2	1	3	6	536	0	3	1	4	523	5	5	15	25	648	4	3	13	20	548	2	0	2	4	69	0.0666666666666667	0.2	0.125912408759124	1.58840579710145	0.0579710144927536	0	0	1	1	90	0.0166666666666667	0.04	0.138888888888889	0.288	0.0111111111111111	0.0833333333333333	5	32	159	1037	0.55969487190359	1	1	1.01905045313697	0.372997304412364	Inf	1.01648818629951	1.67155835080363	0.343285490777379	0.724713813863356	1	1.86219422685252	0.805929919137466	0.739092824625476	1	1	0.7827855967229	1	1	1	55	50	0
"TCGA-N7-A4Y0-01A-12D-A28R-08"	0	0	0	0	854	2	31	126	157	695	28495	9	64	7	80	6244	6	87	7	100	6406	6	32	201	239	7992	9	47	220	276	7853	0	5	4	9	869	0.0105386416861827	0.0326086956521739	0.110658347128486	0.294679041376895	0.0103567318757192	0	2	6	8	893	0.00936768149882904	0.0334728033472803	0.111736736736737	0.299568470718325	0.00895856662933931	0.0117096018735363	10	426	1762	14083	0.999999999999014	1	1	0.18763068715657	0.100948477295058	Inf	0.206252798633746	0	1	1	1	0	0.21360147316939	0.999999999995927	1	1	0.194478418339253	0.000296625880608082	0.00845383759733034	0.0169076751946607	844	685	0
"TCGA-N7-A4Y5-01A-12D-A28R-08"	0	0	0	0	66	0	1	3	4	62	2542	0	4	2	6	578	0	3	4	7	595	8	2	16	26	670	6	2	15	23	699	2	0	2	4	80	0.0606060606060606	0.173913043478261	0.11444921316166	1.5195652173913	0.05	1	1	2	4	82	0.0606060606060606	0.153846153846154	0.122388059701493	1.25703564727955	0.0487804878048781	0.106060606060606	7	38	162	1207	0.286418729658101	1	1	1.3721354260922	0.597937589590498	Inf	1.31454046639232	1.81084656084656	0.228218862247775	0.579434059601034	1	2.03067345287228	1.09040223018718	0.511113845128242	1	1	1.10367756306883	1	1	1	59	55	0
"TCGA-N7-A4Y8-01A-11D-A28R-08"	0	0	0	0	74	1	1	9	10	63	2583	1	5	1	7	578	0	4	2	6	597	3	3	18	24	722	2	4	20	26	686	0	0	2	2	70	0.027027027027027	0.0769230769230769	0.102040816326531	0.753846153846154	0.0285714285714286	0	1	1	2	75	0.027027027027027	0.0833333333333333	0.10387811634349	0.802222222222222	0.0266666666666667	0.0405405405405405	3	40	145	1263	0.832432989028961	1	1	0.653439612971041	0.169338797693588	Inf	0.677465918203689	0	1	1	1	0	0.766606170598911	0.764682299783166	1	1	0.746736292150922	0.142857142857143	0.651583710407241	1	71	60	0
"TCGA-N7-A59B-01A-11D-A28R-08"	0	0	0	0	53	0	0	10	10	43	1763	2	3	0	5	417	4	4	1	9	438	6	3	9	18	460	0	3	8	11	448	0	0	0	0	58	0	0	0.129464285714286	0	0	1	0	0	1	63	0.0188679245283019	0.0555555555555556	0.13695652173913	0.405643738977072	0.0158730158730159	0.0188679245283019	1	22	121	787	0.962080639187503	1	1	0.295892673755303	0.0144330683828984	Inf	0.326266618756737	1.25068870523416	0.577748456932376	0.930021130047733	1	1.30041362073937	0	1	1	1	0	1	1	1	52	42	0
"TCGA-N8-A4PI-01A-21D-A28R-08"	0	0	0	0	64	0	4	2	6	58	2378	2	3	3	8	596	2	3	2	7	591	1	2	13	16	568	5	4	18	27	623	1	1	3	5	92	0.078125	0.185185185185185	0.147672552166934	1.25402576489533	0.0543478260869565	1	0	1	2	76	0.03125	0.125	0.133802816901408	0.93421052631579	0.0263157894736842	0.09375	6	31	168	1023	0.429857627034249	1	1	1.1783803682643	0.473267588857071	Inf	1.1496138996139	2.36309523809524	0.204649173602829	0.579434059601034	1	3.0406267672859	0.914746543778802	0.655413323419251	1	1	0.90215955987426	0.592074592074592	1	1	58	52	0
"TCGA-N8-A4PL-01A-11D-A28R-08"	0	0	0	0	65	0	1	3	4	61	2501	1	3	2	6	541	1	2	0	3	596	2	3	14	19	666	6	6	21	33	698	1	0	1	2	96	0.0307692307692308	0.0606060606060606	0.137535816618911	0.440656565656566	0.0208333333333333	0	1	1	2	74	0.0307692307692308	0.105263157894737	0.111111111111111	0.947368421052632	0.027027027027027	0.0461538461538462	3	40	170	1194	0.915432956472137	1	1	0.526956805342228	0.136757481554569	Inf	0.559781121751026	1.00294117647059	0.656248760664876	0.967344283009792	1	1.00335895436684	0.458487394957983	0.942315605927476	1	1	0.425858116079641	1	1	1	62	58	0
"TCGA-N8-A4PM-01A-11D-A28R-08"	0	0	0	0	70	0	4	7	11	59	2419	3	4	1	8	534	0	7	0	7	587	0	7	19	26	627	1	4	13	18	671	0	0	0	0	79	0	0	0.117734724292101	0	0	0	1	1	2	76	0.0285714285714286	0.0769230769230769	0.121212121212121	0.634615384615385	0.0263157894736842	0.0142857142857143	1	32	155	1143	0.984508424707942	1	1	0.230592797332326	0.011427613319071	Inf	0.253763440860215	0	1	1	1	0	0.261693548387097	0.982451670881933	1	1	0.238029629936599	1	1	1	69	58	0
"TCGA-N8-A4PN-01A-11D-A28R-08"	0	0	0	0	58	0	2	1	3	55	2255	1	1	3	5	559	3	5	0	8	544	2	3	13	18	529	3	2	19	24	623	0	0	3	3	80	0.0517241379310345	0.125	0.128410914927769	0.9734375	0.0375	1	2	2	5	94	0.0862068965517241	0.277777777777778	0.177693761814745	1.56323877068558	0.0531914893617021	0.103448275862069	6	31	174	978	0.498035983443012	1	1	1.08781814556927	0.437016808905894	Inf	1.07362534948742	1.32413793103448	0.560235848267584	0.930021130047733	1	1.40470635723743	1.03448275862069	0.544961207178559	1	1	1.04083890937886	0.118881118881119	0.651583710407241	1	52	49	0
"TCGA-N8-A4PO-01A-11D-A28R-08"	0	0	0	0	89	0	0	3	3	86	3526	4	4	6	14	878	3	5	2	10	756	4	6	17	27	995	7	8	20	35	897	0	2	0	2	115	0.0224719101123595	0.0571428571428571	0.128205128205128	0.445714285714286	0.0173913043478261	0	1	1	2	129	0.0224719101123595	0.0740740740740741	0.12964824120603	0.571346540338788	0.0155038759689922	0.0112359550561798	1	47	244	1648	0.998592295889482	1	1	0.143776956185334	0.00716226871683674	Inf	0.161543715846995	0	1	1	1	0	0.209570225963669	0.993759056158139	1	1	0.187703329392298	1	1	1	88	85	0
"TCGA-N8-A4PP-01A-11D-A28R-08"	0	0	0	0	129	0	2	5	7	122	5002	3	8	8	19	1242	4	12	8	24	1157	10	13	23	46	1307	13	9	11	33	1296	5	3	1	9	181	0.0697674418604651	0.272727272727273	0.139660493827161	1.95278754394776	0.0497237569060773	2	5	1	8	187	0.062015503875969	0.173913043478261	0.143075745983168	1.21553127179726	0.0427807486631016	0.0697674418604651	9	48	368	2235	0.418912584608978	1	1	1.13866622675748	0.559233330891044	Inf	1.11684782608696	2.15276465028355	0.0359665772096451	0.227788322327752	1	2.65556906065909	0.416080562659847	0.962504654758255	1	1	0.379683182381565	0.117538005190953	0.651583710407241	1	120	113	0
"TCGA-N8-A4PQ-01A-11D-A28R-08"	0	0	0	0	80	1	3	1	4	75	3075	2	2	0	4	701	2	0	3	5	733	9	4	22	35	799	4	11	16	31	842	2	3	0	5	108	0.0625	0.161290322580645	0.128266033254157	1.25746714456392	0.0462962962962963	3	2	1	6	111	0.075	0.171428571428571	0.13892365456821	1.23397683397683	0.0540540540540541	0.075	6	45	219	1422	0.691536417591261	1	1	0.865835691296886	0.355894545398294	Inf	0.881547139403707	2.88198103266596	0.0223174609453725	0.181727896269462	1	4.05334518427657	0.19718817591925	0.995488632410193	1	1	0.175589036295138	0.148606811145511	0.651583710407241	1	74	69	0
"TCGA-N8-A56S-01A-11D-A28R-08"	0	0	0	0	59	1	1	6	7	51	2091	1	4	1	6	491	0	3	0	3	452	0	3	18	21	581	2	5	14	21	567	1	0	2	3	69	0.0508474576271186	0.142857142857143	0.121693121693122	1.17391304347826	0.0434782608695652	0	0	3	3	70	0.0508474576271186	0.142857142857143	0.120481927710843	1.18571428571429	0.0428571428571429	0.101694915254237	6	28	139	1009	0.230393615286147	1	1	1.55481470269076	0.618747618082878	Inf	1.45746931866272	4.1294964028777	0.228750898702085	0.579434059601034	1	7.23574475248298	1.29046762589928	0.350464583389919	1	1	1.34388121273151	0.0800865800865801	0.651583710407241	1	53	45	0
"TCGA-N9-A4PZ-01A-22D-A28R-08"	0	0	0	0	83	0	0	2	2	81	3321	1	7	6	14	740	1	7	1	9	722	5	11	21	37	917	4	5	12	21	942	1	2	1	4	114	0.0481927710843374	0.19047619047619	0.121019108280255	1.57393483709273	0.0350877192982456	0	0	0	0	94	0	0	0.102508178844057	0	0	0.0240963855421687	2	40	208	1651	0.956103140614144	1	1	0.397011208042427	0.0678163920982763	Inf	0.425595238095238	0.993055555555556	0.657099748263905	0.967344283009792	1	0.99219156348803	0.270833333333333	0.979716538311754	1	1	0.248155749586757	1	1	1	81	79	0
"TCGA-N9-A4Q1-01A-11D-A28R-08"	0	0	0	0	48	0	4	5	9	39	1599	1	1	1	3	376	0	3	2	5	451	0	4	6	10	350	6	5	10	21	422	0	1	0	1	76	0.0208333333333333	0.0476190476190476	0.180094786729858	0.264411027568922	0.0131578947368421	0	1	0	1	53	0.0208333333333333	0.1	0.151428571428571	0.660377358490566	0.0188679245283019	0	0	22	129	643	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	48	39	0
"TCGA-N9-A4Q3-01A-11D-A28R-08"	0	0	0	0	47	0	4	1	5	42	1722	0	1	1	2	391	2	3	1	6	395	2	2	12	16	467	3	5	10	18	469	0	1	1	2	63	0.0425531914893617	0.111111111111111	0.134328358208955	0.827160493827161	0.0317460317460317	2	0	3	5	64	0.106382978723404	0.3125	0.137044967880086	2.2802734375	0.078125	0.127659574468085	6	21	127	809	0.15680462131766	1	1	1.81863305116604	0.706370106035344	Inf	1.63779527559055	2.94803149606299	0.14108430304682	0.473047369039338	1	4.23696219136066	1.34001431639227	0.354009867736806	1	1	1.41499198211772	0.592074592074592	1	1	41	36	0
"TCGA-N9-A4Q4-01A-11D-A28R-08"	0	0	0	0	47	0	1	5	6	41	1681	0	1	1	2	329	1	2	0	3	393	2	5	8	15	492	3	8	10	21	467	1	2	0	3	53	0.0638297872340425	0.142857142857143	0.113490364025696	1.25876010781671	0.0566037735849057	1	0	0	1	51	0.0212765957446809	0.0666666666666667	0.103658536585366	0.643137254901961	0.0196078431372549	0.0425531914893617	2	21	104	855	0.730058591149	1	1	0.783149286344017	0.12921031217079	Inf	0.801839464882943	3.68846153846154	0.0959945150309182	0.420899027443257	1	5.46378825180124	0	1	1	1	0	0.428571428571429	1	1	45	39	0
"TCGA-N9-A4Q7-01A-11D-A28R-08"	0	0	0	0	360	1	4	3	7	352	14432	1	7	1	9	3423	0	2	1	3	3671	78	17	75	170	3589	64	18	88	170	3749	45	8	39	92	602	0.255555555555556	0.541176470588235	0.160576153640971	3.37021692397889	0.152823920265781	64	7	35	106	527	0.294444444444444	0.623529411764706	0.146837559208693	4.246389105927	0.201138519924099	0.508333333333333	183	122	1129	6209	1.62161042576268e-66	9.24317942684728e-65	9.24317942684728e-65	8.24564705712332	6.71127874135174	Inf	3.89973427812223	4.98909667036764	1.08422636403065e-57	6.18009027497471e-56	6.18009027497471e-56	18.159338402335	2.95071918794525	3.95243223541471e-19	2.25288637418638e-17	2.25288637418638e-17	4.57150092621964	0.000592592294509416	0.0112592535956789	0.0337777607870367	177	169	136
"TCGA-N9-A4Q8-01A-31D-A28R-08"	0	0	0	0	55	0	1	2	3	52	2132	1	2	0	3	493	6	3	1	10	543	5	3	13	21	553	2	6	10	18	543	0	2	1	3	78	0.0545454545454545	0.166666666666667	0.143646408839779	1.16025641025641	0.0384615384615385	3	0	1	4	81	0.0727272727272727	0.19047619047619	0.146473779385172	1.30041152263374	0.0493827160493827	0.0909090909090909	5	25	159	937	0.449018655926138	1	1	1.17840931427968	0.424500237956056	Inf	1.14884696016771	2.95417789757412	0.0693490701214749	0.359354272447643	1	4.41099638425967	0.599398414000547	0.866119443496816	1	1	0.561484787880248	1	1	1	50	47	0
"TCGA-NA-A4QV-01A-11D-A28R-08"	0	0	0	0	51	0	2	3	5	46	1886	1	3	1	5	456	1	3	1	5	441	4	5	11	20	492	3	4	9	16	497	0	0	2	2	52	0.0392156862745098	0.125	0.104627766599598	1.19471153846154	0.0384615384615385	2	0	1	3	64	0.0588235294117647	0.15	0.130081300813008	1.153125	0.046875	0.0980392156862745	5	22	116	873	0.210446225331216	1	1	1.70932827893433	0.607239939114721	Inf	1.57886334610473	2.435960591133	0.196786392452678	0.579434059601034	1	3.00547941814318	1.27887931034483	0.425959260573262	1	1	1.32767671502764	1	1	1	46	41	0
"TCGA-NA-A4QW-01A-11D-A28R-08"	0	0	0	0	65	0	1	3	4	61	2501	0	2	0	2	615	1	2	0	3	590	5	3	27	35	701	3	4	14	21	595	2	1	1	4	83	0.0615384615384615	0.19047619047619	0.139495798319328	1.36546184738956	0.0481927710843374	2	1	6	9	96	0.138461538461538	0.257142857142857	0.136947218259629	1.87767857142857	0.09375	0.169230769230769	11	38	179	1117	0.0732185964399502	0.834691999415432	1	1.8054145330323	0.926996486536651	Inf	1.6253562877665	3.62011173184358	0.0166040904672292	0.168518365743319	0.946433156632065	6.22580000350223	1.23613571331244	0.341077348177209	1	1	1.28448903801019	0.428307982231794	1	1	54	50	0
"TCGA-NA-A4QX-01A-11D-A28R-08"	0	0	0	0	41	1	1	4	5	35	1435	2	1	0	3	328	0	4	0	4	334	2	3	9	14	384	0	2	12	14	389	0	0	1	1	39	0.024390243902439	0.0714285714285714	0.10025706940874	0.712454212454212	0.0256410256410256	0	0	0	0	48	0	0	0.125	0	0	0.024390243902439	1	22	87	686	0.935098304221622	1	1	0.358727978983708	0.0174362108466908	Inf	0.386306846576712	0	1	1	1	0	0.423097974822113	0.917949058402111	1	1	0.394579875343395	1	1	1	40	34	0
"TCGA-NA-A4QY-01A-11D-A28R-08"	0	0	0	0	55	0	2	4	6	49	2009	2	3	2	7	485	2	1	1	4	466	3	3	10	16	502	5	2	15	22	556	2	1	1	4	88	0.0727272727272727	0.181818181818182	0.158273381294964	1.14876033057851	0.0454545454545455	1	0	0	1	75	0.0181818181818182	0.0625	0.149402390438247	0.418333333333333	0.0133333333333333	0.0727272727272727	4	29	163	895	0.76954076181178	1	1	0.757528543644574	0.240698500277529	Inf	0.786763338910578	2.4340490797546	0.114262614631367	0.442844915520981	1	3.28927679304448	0.259631901840491	0.984319917224887	1	1	0.228970714858623	0.523809523809524	1	1	51	45	0
"TCGA-NA-A4R0-01A-11D-A28R-08"	0	0	0	0	69	0	0	4	4	65	2665	1	5	1	7	636	2	6	1	9	576	3	3	14	20	720	6	12	11	29	733	2	3	1	6	89	0.0869565217391304	0.206896551724138	0.121418826739427	1.70399070127857	0.0674157303370786	0	0	3	3	91	0.0434782608695652	0.15	0.126388888888889	1.18681318681319	0.032967032967033	0.0869565217391304	6	28	180	1273	0.244997073881931	1	1	1.51498044543743	0.605069775236601	Inf	1.42450980392157	1.79382716049383	0.310963293733576	0.681727220877455	1	2.01942676898385	1.29155555555556	0.379293058103596	1	1	1.34678502252084	0.619909502262444	1	1	63	59	0
"TCGA-NA-A4R1-01A-11D-A28R-08"	0	0	0	0	153	0	6	14	20	133	5453	0	11	0	11	1179	2	11	0	13	1263	1	3	45	49	1419	0	8	52	60	1592	0	0	1	1	200	0.0065359477124183	0.0166666666666667	0.125628140703518	0.132666666666667	0.005	0	0	1	1	158	0.0065359477124183	0.0204081632653061	0.111346018322763	0.183285972616895	0.00632911392405063	0.0130718954248366	2	96	358	2653	0.999932579609592	1	1	0.154435664296492	0.0269596411209884	Inf	0.171645194390605	0	1	1	1	0	0.173414732477106	0.999924474116035	1	1	0.156061198756536	0.333333333333333	1	1	151	131	0
"TCGA-NA-A5I1-01A-21D-A28R-08"	0	0	0	0	59	0	0	3	3	56	2296	3	3	1	7	537	4	4	4	12	551	7	3	14	24	568	4	5	4	13	640	0	0	0	0	87	0	0	0.1359375	0	0	0	0	0	0	66	0	0	0.116197183098592	0	0	0	0	29	153	1055	1	1	1	0	0	Inf	0	0	1	1	1	0	0	1	1	1	0	1	1	1	59	56	0
"TCGA-ND-A4W6-01A-11D-A28R-08"	0	0	0	0	90	0	1	2	3	87	3567	2	1	0	3	819	1	4	1	6	870	5	4	20	29	914	12	5	32	49	964	7	1	7	15	126	0.166666666666667	0.306122448979592	0.130705394190871	2.34207968901846	0.119047619047619	4	1	4	9	123	0.1	0.310344827586207	0.134573304157549	2.30613961312027	0.0731707317073171	0.244444444444444	22	47	249	1629	7.82426651133014e-05	0.00222991595572909	0.00445983191145818	3.05982784537494	1.88646118297962	Inf	2.40474943251266	4.88022678951098	1.53822372628457e-06	4.38393761991102e-05	8.76787523982205e-05	11.9660187877894	1.59545875810936	0.0805773397715037	1	1	1.75459631840564	1	1	1	68	65	13
"TCGA-ND-A4WA-01A-12D-A28R-08"	0	0	0	0	68	0	1	5	6	62	2542	1	4	2	7	627	2	3	2	7	586	2	7	19	28	697	1	4	15	20	632	1	0	0	1	78	0.0147058823529412	0.05	0.123417721518987	0.405128205128205	0.0128205128205128	1	0	1	2	89	0.0294117647058824	0.0714285714285714	0.127690100430416	0.559390048154093	0.0224719101123595	0.0441176470588235	3	34	167	1162	0.859332907359656	1	1	0.614133636126201	0.158307241385711	Inf	0.645250040459621	5.30538922155689	0.0440218461967049	0.250924523321218	1	13.865026475196	0.234061289186333	0.989233611030144	1	1	0.210988955518214	1	1	1	65	59	0
"TCGA-ND-A4WC-01A-21D-A28R-08"	0	0	0	0	4540	12	12	3	15	4513	185033	17	278	366	661	50112	26	284	355	665	50544	5	660	900	1565	41805	6	726	890	1622	42572	0	582	86	668	7515	0.147136563876652	0.411837237977805	0.176524476181528	2.33303192218112	0.0888888888888889	0	527	81	608	7218	0.133920704845815	0.388498402555911	0.172658772874058	2.25009361580075	0.0842338597949571	0.036784140969163	167	1634	14733	69644	1	1	1	0.483131471497752	0.420235174624276	Inf	0.531050289074831	0	1	1	1	0	0.534313726605458	1	1	1	0.486405836439835	3.18779482381108e-53	1.81704304957232e-51	1.81704304957232e-51	4373	4346	0
"TCGA-ND-A4WF-01A-11D-A28R-08"	0	0	0	0	77	0	1	1	2	75	3075	0	7	1	8	754	2	9	0	11	737	3	2	16	21	799	8	6	21	35	785	1	0	0	1	115	0.012987012987013	0.0285714285714286	0.146496815286624	0.195031055900621	0.00869565217391304	0	1	3	4	115	0.051948051948052	0.19047619047619	0.143929912390488	1.32339544513458	0.0347826086956522	0.051948051948052	4	44	230	1354	0.930591315867159	1	1	0.535345986946774	0.174106826038017	Inf	0.573913043478261	0.626086956521739	0.822154790439462	1	1	0.588858924826386	0.558401880141011	0.919039371718983	1	1	0.519606865247189	0.523809523809524	1	1	73	71	0
"TCGA-NF-A4WU-01A-11D-A28R-08"	0	0	0	0	44	0	1	1	2	42	1722	1	2	1	4	392	2	0	1	3	397	0	2	16	18	479	2	5	10	17	454	0	0	1	1	67	0.0227272727272727	0.0588235294117647	0.147577092511013	0.398595258999122	0.0149253731343284	0	0	0	0	55	0	0	0.11482254697286	0	0	0.0227272727272727	1	27	122	811	0.979630580532853	1	1	0.246423598341814	0.0121206769719717	Inf	0.273126463700234	0	1	1	1	0	0.294136191677175	0.973208082588956	1	1	0.266130630245405	1	1	1	43	41	0
"TCGA-NF-A4WX-01A-11D-A28R-08"	0	0	0	0	44	0	2	5	7	37	1517	0	0	1	1	335	2	4	0	6	388	0	3	11	14	381	2	1	13	16	413	0	0	2	2	59	0.0454545454545455	0.125	0.142857142857143	0.875	0.0338983050847458	0	0	0	0	40	0	0	0.10498687664042	0	0	0.0454545454545455	2	24	99	695	0.851802835345093	1	1	0.585333868720788	0.0971888667716184	Inf	0.616938616938617	0	1	1	1	0	0.668350168350168	0.818940072822726	1	1	0.638499438614093	0.333333333333333	1	1	42	35	0
"TCGA-NF-A4X2-01A-11D-A28R-08"	0	0	0	0	117	0	5	6	11	106	4346	4	3	3	10	1063	1	6	4	11	939	6	8	19	33	1133	9	17	26	52	1211	0	0	1	1	124	0.00854700854700855	0.0192307692307692	0.102394715111478	0.18781017369727	0.00806451612903226	2	1	1	4	130	0.0341880341880342	0.121212121212121	0.114739629302736	1.05641025641026	0.0307692307692308	0.0341880341880342	4	56	254	2090	0.900249100006515	1	1	0.587846073430236	0.193021045113389	Inf	0.615223097112861	1.23044619422572	0.496093947033905	0.930021130047733	1	1.26575995593154	0.410148731408574	0.962254864616933	1	1	0.382820569131667	1	1	1	113	102	0
"TCGA-NF-A5CP-01A-12D-A28R-08"	0	0	0	0	77	0	1	3	4	73	2993	1	5	2	8	696	3	1	1	5	655	6	3	22	31	819	4	3	22	29	823	1	0	0	1	116	0.012987012987013	0.0344827586206897	0.140947752126367	0.244649227110583	0.00862068965517241	1	0	0	1	98	0.012987012987013	0.032258064516129	0.11965811965812	0.269585253456221	0.0102040816326531	0.025974025974026	2	52	214	1428	0.994836221931063	1	1	0.256776850313608	0.044190018567656	Inf	0.284181377639322	1.53457943925234	0.383455323297041	0.780605479568976	1	1.66759869744549	0	1	1	1	0	0.333333333333333	1	1	75	71	0
"TCGA-NG-A4VU-01A-11D-A28R-08"	0	0	0	0	43	0	0	2	2	41	1681	0	4	0	4	378	0	1	0	1	383	4	1	9	14	446	4	3	15	22	474	1	0	4	5	61	0.116279069767442	0.227272727272727	0.128691983122363	1.76602086438152	0.0819672131147541	1	0	2	3	49	0.0697674418604651	0.214285714285714	0.109865470852018	1.95043731778426	0.0612244897959184	0.186046511627907	8	24	110	810	0.0351902145306062	0.528847793650195	1	2.45138040365468	1.08326505320497	Inf	2.09090909090909	2.09090909090909	0.249925587757892	0.593573270924993	1	2.45124451956189	2.09090909090909	0.0631851423419805	1	1	2.45133646140774	0.131934731934732	0.651583710407241	1	35	33	0
"TCGA-NG-A4VW-01A-11D-A28R-08"	0	0	0	0	61	1	3	2	5	55	2255	0	3	2	5	571	0	1	2	3	485	1	2	24	27	609	1	3	16	20	590	0	1	0	1	74	0.0163934426229508	0.05	0.125423728813559	0.398648648648649	0.0135135135135135	0	0	3	3	84	0.0491803278688525	0.111111111111111	0.137931034482759	0.805555555555555	0.0357142857142857	0.0491803278688525	3	39	158	1041	0.92637182446199	1	1	0.507036573988307	0.131348250715716	Inf	0.542043399638336	0	1	1	1	0	0.569145569620253	0.910543778417116	1	1	0.534430072098014	0.142857142857143	0.651583710407241	1	58	52	0
"TCGA-QM-A5NM-01A-11D-A28R-08"	0	0	0	0	60	0	0	2	2	58	2378	3	2	3	8	510	1	5	0	6	561	5	7	11	23	630	1	2	18	21	677	0	0	2	2	101	0.0333333333333333	0.0952380952380952	0.149187592319055	0.638378123526638	0.0198019801980198	1	1	0	2	65	0.0333333333333333	0.0869565217391304	0.103174603174603	0.842809364548495	0.0307692307692308	0.05	3	32	166	1141	0.838114777650804	1	1	0.644571260972992	0.165688363520278	Inf	0.67487091222031	1.31224899598394	0.558638782991905	0.930021130047733	1	1.37432109393433	0.542999584545077	0.897601973445405	1	1	0.509350322755176	1	1	1	57	55	0
"TCGA-QN-A5NN-01A-11D-A28R-08"	0	0	0	0	84	0	0	9	9	75	3075	3	8	4	15	693	2	3	3	8	727	5	5	15	25	800	4	2	21	27	855	1	0	2	3	117	0.0357142857142857	0.111111111111111	0.136842105263158	0.811965811965812	0.0256410256410256	0	0	0	0	99	0	0	0.12375	0	0	0.0357142857142857	3	42	216	1439	0.943214668957866	1	1	0.476020876016252	0.124019753054803	Inf	0.510802469135803	0.851337448559671	0.716585113190836	1	1	0.832852347713245	0.425668724279835	0.957549134872662	1	1	0.392038478193021	1	1	1	81	72	0
"Totals"	0	0	0	0	9501	28	134	369	503	8970	367770	108	543	475	1126	92315	120	558	445	1123	93092	291	947	2046	3284	90503	302	1071	2064	3437	91860	96	633	199	928	13774	0.0976739290600989	0.270002909514111	0.149945569344655	1.8006728087677	0.0673733120371715	116	569	181	866	13241	0.0911483001789285	0.263702801461632	0.14630454239086	1.80242388344401	0.0654029151876746	0.0623092306073045	592	4111	27015	155348	0.999993398966422	NA	NA	0.8280861970523	0.768615253251788	Inf	0.849725172566772	2.41330895115105	2.50694293430132e-36	NA	NA	3.19969129948002	0.624127804999746	1	NA	NA	0.585838912538044	4.23262463075797e-14	NA	NA	8909	8378	NA
