name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-OR-A5J1-01A-11D-A29I-10	58	57	1	35	1.724138e-02	0	coding only	34834024	20	33	5.741513e-07	9.473496e-07
TCGA-OR-A5J2-01A-11D-A29I-10	103	102	1	69	9.708738e-03	0	coding only	34834024	32	63	9.186421e-07	1.808577e-06
TCGA-OR-A5J3-01A-11D-A29I-10	103	101	2	62	1.941748e-02	0	coding only	34834024	34	55	9.760572e-07	1.578916e-06
TCGA-OR-A5J4-01A-11D-A29I-10	220	219	1	161	4.545455e-03	0	coding only	34834024	55	149	1.578916e-06	4.277427e-06
TCGA-OR-A5J5-01A-11D-A29I-10	685	679	6	483	8.759124e-03	0	coding only	34834024	189	446	5.425730e-06	1.280357e-05
TCGA-OR-A5J6-01A-31D-A29I-10	152	150	2	85	1.315789e-02	0	coding only	34834024	60	79	1.722454e-06	2.267898e-06
TCGA-OR-A5J7-01A-11D-A29I-10	124	122	2	81	1.612903e-02	0	coding only	34834024	37	75	1.062180e-06	2.153067e-06
TCGA-OR-A5J8-01A-11D-A29I-10	225	220	5	151	2.222222e-02	0	coding only	34834024	64	138	1.837284e-06	3.961644e-06
TCGA-OR-A5J9-01A-11D-A29I-10	165	164	1	105	6.060606e-03	0	coding only	34834024	48	99	1.377963e-06	2.842049e-06
TCGA-OR-A5JA-01A-11D-A29I-10	767	761	6	607	7.822686e-03	0	coding only	34834024	136	565	3.904229e-06	1.621977e-05
TCGA-OR-A5JB-01A-11D-A29I-10	477	471	6	335	1.257862e-02	0	coding only	34834024	123	318	3.531030e-06	9.129006e-06
TCGA-OR-A5JC-01A-11D-A29I-10	105	104	1	62	9.523810e-03	0	coding only	34834024	39	59	1.119595e-06	1.693746e-06
TCGA-OR-A5JD-01A-11D-A29I-10	92	91	1	55	1.086957e-02	0	coding only	34834024	35	47	1.004765e-06	1.349256e-06
TCGA-OR-A5JE-01A-11D-A29I-10	161	160	1	110	6.211180e-03	0	coding only	34834024	43	104	1.234425e-06	2.985587e-06
TCGA-OR-A5JF-01A-11D-A29I-10	173	170	3	116	1.734104e-02	0	coding only	34834024	51	106	1.464086e-06	3.043002e-06
TCGA-OR-A5JG-01A-11D-A29I-10	153	150	3	99	1.960784e-02	0	coding only	34834024	47	95	1.349256e-06	2.727219e-06
TCGA-OR-A5JH-01A-11D-A30A-10	76	74	2	40	2.631579e-02	0	coding only	34834024	31	37	8.899345e-07	1.062180e-06
TCGA-OR-A5JI-01A-11D-A29I-10	81	79	2	52	2.469136e-02	0	coding only	34834024	27	42	7.751042e-07	1.205718e-06
TCGA-OR-A5JJ-01A-11D-A29I-10	119	117	2	71	1.680672e-02	0	coding only	34834024	45	68	1.291840e-06	1.952114e-06
TCGA-OR-A5JK-01A-11D-A29I-10	115	113	2	70	1.739130e-02	0	coding only	34834024	38	65	1.090887e-06	1.865992e-06
TCGA-OR-A5JL-01A-11D-A29I-10	112	110	2	69	1.785714e-02	0	coding only	34834024	37	65	1.062180e-06	1.865992e-06
TCGA-OR-A5JM-01A-11D-A29I-10	178	175	3	115	1.685393e-02	0	coding only	34834024	53	99	1.521501e-06	2.842049e-06
TCGA-OR-A5JO-01A-11D-A29I-10	134	134	0	76	0	0	coding only	34834024	51	74	1.464086e-06	2.124360e-06
TCGA-OR-A5JP-01A-11D-A29I-10	188	185	3	129	1.595745e-02	0	coding only	34834024	50	117	1.435378e-06	3.358785e-06
TCGA-OR-A5JQ-01A-11D-A29I-10	97	94	3	51	3.092784e-02	0	coding only	34834024	39	48	1.119595e-06	1.377963e-06
TCGA-OR-A5JR-01A-11D-A29I-10	80	79	1	40	1.250000e-02	0	coding only	34834024	38	31	1.090887e-06	8.899345e-07
TCGA-OR-A5JS-01A-11D-A29I-10	196	195	1	116	5.102041e-03	0	coding only	34834024	68	111	1.952114e-06	3.186540e-06
TCGA-OR-A5JT-01A-11D-A29I-10	89	89	0	59	0	0	coding only	34834024	27	58	7.751042e-07	1.665039e-06
TCGA-OR-A5JU-01A-11D-A30A-10	137	137	0	89	0	0	coding only	34834024	44	78	1.263133e-06	2.239190e-06
TCGA-OR-A5JV-01A-11D-A29I-10	80	79	1	51	1.250000e-02	0	coding only	34834024	26	46	7.463967e-07	1.320548e-06
TCGA-OR-A5JW-01A-11D-A29I-10	125	120	5	80	4.000000e-02	1	exome+100bp flanks	34834024	36	72	1.033472e-06	2.066945e-06
TCGA-OR-A5JX-01A-11D-A29I-10	119	117	2	79	1.680672e-02	0	coding only	34834024	34	71	9.760572e-07	2.038237e-06
TCGA-OR-A5JY-01A-31D-A29I-10	159	156	3	111	1.886792e-02	0	coding only	34834024	42	100	1.205718e-06	2.870756e-06
TCGA-OR-A5JZ-01A-11D-A29I-10	108	105	3	57	2.777778e-02	0	coding only	34834024	42	51	1.205718e-06	1.464086e-06
TCGA-OR-A5K0-01A-11D-A29I-10	206	204	2	121	9.708738e-03	0	coding only	34834024	77	112	2.210482e-06	3.215247e-06
TCGA-OR-A5K1-01A-11D-A29I-10	116	115	1	79	8.620690e-03	0	coding only	34834024	32	68	9.186421e-07	1.952114e-06
TCGA-OR-A5K2-01A-11D-A29I-10	211	208	3	119	1.421801e-02	0	coding only	34834024	81	106	2.325313e-06	3.043002e-06
TCGA-OR-A5K3-01A-11D-A29I-10	222	220	2	122	9.009009e-03	0	coding only	34834024	87	110	2.497558e-06	3.157832e-06
TCGA-OR-A5K4-01A-11D-A29I-10	409	404	5	272	1.222494e-02	0	coding only	34834024	124	254	3.559738e-06	7.291721e-06
TCGA-OR-A5K5-01A-11D-A29I-10	226	223	3	171	1.327434e-02	0	coding only	34834024	51	163	1.464086e-06	4.679333e-06
TCGA-OR-A5K6-01A-11D-A29I-10	156	154	2	89	1.282051e-02	0	coding only	34834024	58	83	1.665039e-06	2.382728e-06
TCGA-OR-A5K8-01A-11D-A29I-10	107	107	0	74	0	0	coding only	34834024	29	69	8.325194e-07	1.980822e-06
TCGA-OR-A5K9-01A-11D-A29I-10	290	286	4	194	1.379310e-02	0	coding only	34834024	85	183	2.440143e-06	5.253484e-06
TCGA-OR-A5KB-01A-11D-A30A-10	2634	2606	28	1963	1.063022e-02	0	coding only	34834024	595	1831	1.708100e-05	5.256355e-05
TCGA-OR-A5KO-01A-11D-A29I-10	166	165	1	91	6.024096e-03	0	coding only	34834024	67	80	1.923407e-06	2.296605e-06
TCGA-OR-A5KP-01A-11D-A30A-10	162	161	1	109	6.172840e-03	0	coding only	34834024	47	99	1.349256e-06	2.842049e-06
TCGA-OR-A5KQ-01A-11D-A30A-10	118	118	0	67	0	0	coding only	34834024	43	59	1.234425e-06	1.693746e-06
TCGA-OR-A5KS-01A-11D-A30A-10	141	140	1	86	7.092199e-03	0	coding only	34834024	52	81	1.492793e-06	2.325313e-06
TCGA-OR-A5KT-01A-11D-A29I-10	90	87	3	53	3.333333e-02	0	coding only	34834024	32	49	9.186421e-07	1.406671e-06
TCGA-OR-A5KU-01A-11D-A29I-10	123	118	5	74	4.065041e-02	1	exome+100bp flanks	34834024	39	64	1.119595e-06	1.837284e-06
TCGA-OR-A5KV-01A-11D-A29I-10	118	118	0	79	0	0	coding only	34834024	35	67	1.004765e-06	1.923407e-06
TCGA-OR-A5KW-01A-11D-A29I-10	111	110	1	71	9.009009e-03	0	coding only	34834024	36	60	1.033472e-06	1.722454e-06
TCGA-OR-A5KX-01A-11D-A29I-10	122	116	6	76	4.918033e-02	1	exome+100bp flanks	34834024	39	69	1.119595e-06	1.980822e-06
TCGA-OR-A5KY-01A-11D-A29I-10	144	144	0	79	0	0	coding only	34834024	58	73	1.665039e-06	2.095652e-06
TCGA-OR-A5KZ-01A-11D-A29I-10	103	102	1	69	9.708738e-03	0	coding only	34834024	29	57	8.325194e-07	1.636331e-06
TCGA-OR-A5L1-01A-11D-A30A-10	81	80	1	43	1.234568e-02	0	coding only	34834024	34	35	9.760572e-07	1.004765e-06
TCGA-OR-A5L2-01A-11D-A30A-10	262	260	2	180	7.633588e-03	0	coding only	34834024	77	167	2.210482e-06	4.794163e-06
TCGA-OR-A5L3-01A-11D-A29I-10	103	101	2	59	1.941748e-02	0	coding only	34834024	38	57	1.090887e-06	1.636331e-06
TCGA-OR-A5L4-01A-11D-A29I-10	89	85	4	59	4.494382e-02	0	coding only	34834024	24	55	6.889816e-07	1.578916e-06
TCGA-OR-A5L5-01A-11D-A29I-10	131	130	1	75	7.633588e-03	0	coding only	34834024	46	67	1.320548e-06	1.923407e-06
TCGA-OR-A5L6-01A-11D-A29I-10	122	121	1	81	8.196721e-03	0	coding only	34834024	34	73	9.760572e-07	2.095652e-06
TCGA-OR-A5L8-01A-11D-A29I-10	112	109	3	72	2.678571e-02	0	coding only	34834024	32	65	9.186421e-07	1.865992e-06
TCGA-OR-A5L9-01A-11D-A29I-10	99	97	2	66	2.020202e-02	0	coding only	34834024	29	62	8.325194e-07	1.779869e-06
TCGA-OR-A5LA-01A-11D-A29I-10	76	73	3	50	3.947368e-02	0	coding only	34834024	22	46	6.315664e-07	1.320548e-06
TCGA-OR-A5LB-01A-11D-A29I-10	385	376	9	292	2.337662e-02	0	coding only	34834024	74	281	2.124360e-06	8.066826e-06
TCGA-OR-A5LC-01A-11D-A29I-10	155	154	1	97	6.451613e-03	0	coding only	34834024	52	86	1.492793e-06	2.468851e-06
TCGA-OR-A5LD-01A-11D-A29I-10	121	117	4	82	3.305785e-02	0	coding only	34834024	32	74	9.186421e-07	2.124360e-06
TCGA-OR-A5LE-01A-11D-A29I-10	136	135	1	77	7.352941e-03	0	coding only	34834024	53	73	1.521501e-06	2.095652e-06
TCGA-OR-A5LF-01A-11D-A30A-10	135	132	3	73	2.222222e-02	0	coding only	34834024	54	67	1.550208e-06	1.923407e-06
TCGA-OR-A5LG-01A-11D-A29I-10	147	147	0	87	0	0	coding only	34834024	52	76	1.492793e-06	2.181775e-06
TCGA-OR-A5LH-01A-11D-A29I-10	114	113	1	72	8.771930e-03	0	coding only	34834024	41	60	1.177010e-06	1.722454e-06
TCGA-OR-A5LI-01A-11D-A30A-10	197	195	2	126	1.015228e-02	0	coding only	34834024	62	115	1.779869e-06	3.301370e-06
TCGA-OR-A5LJ-01A-11D-A29I-10	721	713	8	504	1.109570e-02	0	coding only	34834024	192	481	5.511852e-06	1.380834e-05
TCGA-OR-A5LK-01A-11D-A29I-10	136	134	2	89	1.470588e-02	0	coding only	34834024	41	78	1.177010e-06	2.239190e-06
TCGA-OR-A5LL-01A-11D-A29I-10	105	104	1	77	9.523810e-03	0	coding only	34834024	26	73	7.463967e-07	2.095652e-06
TCGA-OR-A5LN-01A-11D-A29I-10	143	142	1	67	6.993007e-03	0	coding only	34834024	70	58	2.009530e-06	1.665039e-06
TCGA-OR-A5LO-01A-11D-A29I-10	179	176	3	116	1.675978e-02	0	coding only	34834024	53	108	1.521501e-06	3.100417e-06
TCGA-OR-A5LP-01A-11D-A29I-10	94	94	0	59	0	0	coding only	34834024	34	54	9.760572e-07	1.550208e-06
TCGA-OR-A5LR-01A-11D-A29I-10	67	66	1	42	1.492537e-02	0	coding only	34834024	20	39	5.741513e-07	1.119595e-06
TCGA-OR-A5LS-01A-11D-A29I-10	167	165	2	105	1.197605e-02	0	coding only	34834024	51	95	1.464086e-06	2.727219e-06
TCGA-OR-A5LT-01A-11D-A29I-10	120	117	3	67	2.500000e-02	0	coding only	34834024	41	62	1.177010e-06	1.779869e-06
TCGA-OU-A5PI-01A-12D-A29I-10	144	143	1	83	6.944444e-03	0	coding only	34834024	55	79	1.578916e-06	2.267898e-06
TCGA-P6-A5OF-01A-11D-A29I-10	85	85	0	53	0	0	coding only	34834024	32	46	9.186421e-07	1.320548e-06
TCGA-P6-A5OH-01A-11D-A30A-10	291	290	1	204	3.436426e-03	0	coding only	34834024	82	185	2.354020e-06	5.310899e-06
TCGA-PA-A5YG-01A-11D-A29I-10	53	52	1	42	1.886792e-02	0	coding only	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-PK-A5H8-01A-11D-A29I-10	78	77	1	49	1.282051e-02	0	coding only	34834024	25	42	7.176891e-07	1.205718e-06
TCGA-PK-A5H9-01A-11D-A29I-10	143	139	4	82	2.797203e-02	0	coding only	34834024	50	72	1.435378e-06	2.066945e-06
TCGA-PK-A5HA-01A-11D-A29I-10	181	177	4	102	2.209945e-02	0	coding only	34834024	72	94	2.066945e-06	2.698511e-06
TCGA-PK-A5HB-01A-11D-A29I-10	1586	1571	15	1134	9.457755e-03	0	coding only	34834024	421	1059	1.208588e-05	3.040131e-05
TCGA-PK-A5HC-01A-11D-A30A-10	244	241	3	148	1.229508e-02	0	coding only	34834024	86	132	2.468851e-06	3.789399e-06