Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER KARNOFSKY.PERFORMANCE.SCORE NUMBERPACKYEARSSMOKED NUMBER.OF.LYMPH.NODES RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 56 (20%) 222 0.26185 1 0.30235 1 0.31227 1 0.97686 1 0.057129 1 0.91334 1 0.50421 1 0.91939 1 0.23029 1 0.61735 1 0.30384 1 1 1 1q gain 82 (29%) 196 0.18239 1 0.7766 1 0.03525 1 0.62192 1 0.071889 1 0.04146 1 0.30603 1 0.93003 1 0.09791 1 0.075855 1 0.090409 1 1 1 2p gain 66 (24%) 212 0.21701 1 0.076898 1 0.12143 1 0.8402 1 0.0060199 1 0.32284 1 0.040854 1 0.72318 1 0.038143 1 0.0047694 1 0.91063 1 0.58936 1 2q gain 29 (10%) 249 0.12991 1 0.85607 1 0.91857 1 0.8368 1 0.61966 1 0.50884 1 0.38699 1 0.81875 1 0.93057 1 0.36829 1 0.90676 1 1 1 3p gain 88 (32%) 190 0.060771 1 0.0089624 1 0.00124 1 0.15451 1 0.00336 1 0.81834 1 0.38806 1 0.23806 1 0.20976 1 9.7251e-05 0.0934 0.45719 1 0.32873 1 3q gain 115 (41%) 163 0.81645 1 0.011144 1 0.00134 1 0.42389 1 0.00064999 0.622 0.64204 1 1 1 0.41278 1 0.52936 1 0.00015754 0.151 0.81117 1 1 1 4p gain 28 (10%) 250 0.1693 1 0.94146 1 0.11606 1 0.071749 1 0.17558 1 0.28524 1 0.18085 1 0.74726 1 0.99576 1 0.25962 1 0.72101 1 0.36951 1 4q gain 17 (6%) 261 0.40659 1 0.56404 1 0.055149 1 0.097979 1 0.74764 1 0.65192 1 1 1 0.59282 1 0.97739 1 0.3887 1 1 1 0.25618 1 5p gain 102 (37%) 176 0.96647 1 0.94852 1 0.75721 1 0.46387 1 1 1 0.089529 1 0.26737 1 0.4697 1 0.57022 1 0.40841 1 0.1255 1 0.65247 1 5q gain 34 (12%) 244 0.93235 1 0.40389 1 0.50546 1 0.77158 1 0.35129 1 0.5311 1 0.4147 1 0.29491 1 0.29921 1 0.7027 1 0.92792 1 1 1 6p gain 41 (15%) 237 0.96208 1 0.10781 1 0.2407 1 0.29452 1 0.68298 1 0.38314 1 0.7073 1 0.64139 1 0.061475 1 0.77344 1 0.93837 1 1 1 6q gain 23 (8%) 255 0.48927 1 0.28455 1 0.89112 1 0.7128 1 0.13501 1 0.43627 1 0.1431 1 0.16973 1 0.10861 1 0.87507 1 0.42246 1 1 1 7p gain 112 (40%) 166 0.37964 1 0.054055 1 0.15717 1 0.19866 1 0.03284 1 0.97165 1 1 1 0.65928 1 0.92067 1 0.24052 1 0.36843 1 0.65112 1 7q gain 98 (35%) 180 0.70615 1 0.06443 1 0.087339 1 0.076199 1 0.00123 1 0.38717 1 0.88855 1 0.4873 1 0.36448 1 0.073268 1 0.12353 1 0.16603 1 8p gain 55 (20%) 223 0.083487 1 0.48754 1 0.1025 1 0.62344 1 0.79872 1 0.50358 1 0.50456 1 0.82537 1 0.67709 1 0.18285 1 0.71848 1 1 1 8q gain 129 (46%) 149 0.091358 1 0.76339 1 0.30141 1 0.7147 1 0.38131 1 0.70891 1 0.89348 1 0.62239 1 0.23292 1 0.079115 1 0.39392 1 1 1 9p gain 46 (17%) 232 0.019834 1 0.50835 1 0.53841 1 0.80328 1 0.19452 1 0.17409 1 0.37113 1 0.30797 1 0.51966 1 0.92002 1 0.26913 1 0.58408 1 9q gain 36 (13%) 242 0.12434 1 0.2286 1 0.01603 1 0.075369 1 0.24063 1 0.066769 1 0.69213 1 0.84356 1 0.12201 1 0.051179 1 0.62985 1 1 1 10p gain 76 (27%) 202 0.19197 1 0.8639 1 0.21316 1 0.79414 1 0.18405 1 0.86887 1 0.29238 1 0.68039 1 0.28203 1 0.4233 1 0.29685 1 1 1 10q gain 25 (9%) 253 0.26147 1 0.90974 1 0.24308 1 0.40038 1 0.051919 1 0.57957 1 0.48445 1 0.42252 1 0.77448 1 0.14212 1 1 1 1 1 11p gain 25 (9%) 253 0.097033 1 0.99269 1 0.72121 1 0.18723 1 0.03823 1 0.41816 1 0.019183 1 0.85707 1 0.74691 1 0.92618 1 0.27014 1 0.39556 1 11q gain 37 (13%) 241 0.16967 1 0.03449 1 0.55818 1 0.43722 1 0.02031 1 0.16108 1 0.016586 1 0.39579 1 0.6565 1 0.22116 1 0.17255 1 0.5239 1 12p gain 77 (28%) 201 0.82664 1 0.04636 1 0.56386 1 0.38323 1 0.71097 1 0.23894 1 0.88131 1 0.8245 1 0.62563 1 0.24883 1 0.95724 1 1 1 12q gain 58 (21%) 220 0.70019 1 0.45107 1 0.21481 1 0.15192 1 0.63494 1 0.10174 1 1 1 0.65122 1 0.488 1 0.19563 1 0.45995 1 1 1 13q gain 65 (23%) 213 0.77212 1 0.18183 1 0.35831 1 0.84248 1 0.01077 1 0.072599 1 0.26748 1 0.96368 1 0.7562 1 0.058254 1 0.096139 1 0.34205 1 14q gain 44 (16%) 234 0.065139 1 0.70029 1 0.47484 1 0.13242 1 0.97121 1 0.03022 1 0.3584 1 0.69027 1 0.56389 1 0.65095 1 0.01331 1 0.55481 1 15q gain 22 (8%) 256 0.86597 1 0.22048 1 0.86171 1 0.067859 1 0.17724 1 0.10567 1 0.45612 1 0.29578 1 0.936 1 0.52356 1 0.53792 1 1 1 16p gain 49 (18%) 229 0.060527 1 0.31969 1 0.18277 1 0.0064299 1 0.10987 1 0.03954 1 0.60219 1 0.91763 1 0.27563 1 0.24563 1 0.47465 1 0.59349 1 16q gain 54 (19%) 224 0.48965 1 0.47985 1 0.57201 1 0.01514 1 0.14092 1 0.058539 1 0.31279 1 0.86215 1 0.93042 1 0.96592 1 0.32091 1 0.58752 1 17p gain 39 (14%) 239 0.050163 1 0.10487 1 0.27427 1 0.6431 1 0.52867 1 0.34486 1 1 1 0.34818 1 0.85525 1 0.92975 1 0.48478 1 1 1 17q gain 92 (33%) 186 0.048517 1 0.34422 1 0.22263 1 0.52854 1 0.063109 1 0.77462 1 0.88757 1 0.26302 1 0.56666 1 0.053898 1 0.35642 1 0.65578 1 18p gain 78 (28%) 200 0.10252 1 0.49605 1 0.97382 1 0.36986 1 0.62587 1 0.20115 1 0.55089 1 0.028955 1 0.19481 1 0.90074 1 0.053689 1 1 1 18q gain 40 (14%) 238 0.10083 1 0.9311 1 1 1 0.13334 1 0.94073 1 0.35482 1 0.70638 1 0.13002 1 0.55793 1 0.88681 1 0.0245 1 0.54469 1 19p gain 52 (19%) 226 0.43964 1 0.6318 1 0.44937 1 0.43582 1 0.073399 1 0.90591 1 0.49302 1 0.97715 1 0.86518 1 0.059312 1 0.03275 1 0.58752 1 19q gain 88 (32%) 190 0.22551 1 0.3765 1 0.45862 1 0.37592 1 0.21078 1 0.93514 1 0.88591 1 0.76879 1 0.44837 1 0.037998 1 0.8197 1 0.64506 1 20p gain 132 (47%) 146 0.64184 1 0.35352 1 0.25555 1 0.68195 1 0.086879 1 0.30774 1 0.68955 1 0.38929 1 0.16267 1 0.12899 1 0.086389 1 0.37432 1 20q gain 154 (55%) 124 0.68811 1 0.69256 1 0.6532 1 0.98437 1 0.25585 1 0.57539 1 1 1 0.6301 1 0.41627 1 0.53302 1 0.30283 1 0.66393 1 21q gain 77 (28%) 201 0.39747 1 0.11421 1 0.66874 1 0.53336 1 0.14012 1 0.74735 1 0.23166 1 0.88924 1 0.8977 1 0.27535 1 0.84261 1 0.61952 1 22q gain 36 (13%) 242 0.74072 1 0.95497 1 0.46132 1 0.66449 1 1 1 0.78221 1 0.84237 1 0.63424 1 0.95883 1 0.43132 1 0.6287 1 1 1 xq gain 29 (10%) 249 0.17377 1 0.45103 1 0.91197 1 0.2226 1 0.89745 1 0.67808 1 0.38699 1 0.30844 1 0.99085 1 0.59879 1 0.69407 1 1 1 1p loss 19 (7%) 259 0.75582 1 0.91488 1 0.96502 1 0.51382 1 0.71315 1 0.36579 1 0.11078 1 0.78722 1 0.17949 1 0.76557 1 0.65927 1 1 1 1q loss 20 (7%) 258 0.46478 1 0.87216 1 0.69912 1 0.65413 1 0.69784 1 0.70201 1 0.60489 1 0.87592 1 0.06309 1 0.68524 1 1 1 1 1 2p loss 30 (11%) 248 0.34615 1 0.86103 1 0.75788 1 0.34581 1 0.70184 1 0.8656 1 0.1963 1 0.46575 1 0.27132 1 0.67931 1 0.62031 1 0.42075 1 2q loss 61 (22%) 217 0.3567 1 0.81421 1 0.58296 1 0.95703 1 0.083169 1 0.84503 1 1 1 0.13734 1 0.98321 1 0.15099 1 0.65644 1 0.28879 1 3p loss 36 (13%) 242 0.5412 1 0.2669 1 0.9027 1 0.64665 1 0.39714 1 0.83666 1 0.11409 1 0.46652 1 0.37385 1 0.77339 1 0.13145 1 0.48005 1 3q loss 15 (5%) 263 0.53553 1 0.51683 1 0.87052 1 0.80418 1 0.52856 1 0.38973 1 1 1 0.20626 1 0.80059 1 0.44863 1 0.68959 1 1 1 4p loss 91 (33%) 187 0.292 1 0.37393 1 0.19678 1 0.24481 1 0.03085 1 0.65709 1 0.39396 1 0.93569 1 0.087327 1 0.066752 1 0.076299 1 1 1 4q loss 89 (32%) 189 0.92262 1 0.072785 1 0.43919 1 0.31635 1 0.33571 1 0.46183 1 1 1 0.41728 1 0.67055 1 0.32242 1 0.40698 1 1 1 5p loss 42 (15%) 236 0.5281 1 0.091119 1 0.33783 1 0.97203 1 0.63873 1 0.46981 1 0.45401 1 0.36717 1 0.46633 1 0.66414 1 0.81773 1 1 1 5q loss 105 (38%) 173 0.70817 1 0.1019 1 0.093499 1 0.80945 1 0.02863 1 0.03134 1 0.78411 1 0.0081616 1 0.40238 1 0.059693 1 0.29361 1 0.3681 1 6p loss 65 (23%) 213 0.67497 1 0.84543 1 0.091859 1 0.01482 1 0.052509 1 0.63257 1 0.5299 1 0.69925 1 0.39937 1 0.15003 1 0.31143 1 0.087074 1 6q loss 101 (36%) 177 0.63208 1 0.91167 1 0.11153 1 0.51087 1 0.050459 1 0.5757 1 0.26844 1 0.15679 1 0.53242 1 0.028472 1 0.26038 1 0.061026 1 7p loss 10 (4%) 268 0.38732 1 0.71581 1 0.53428 1 0.82023 1 0.11748 1 0.4896 1 0.29312 1 0.72865 1 0.65727 1 0.1601 1 1 1 1 1 7q loss 15 (5%) 263 0.67995 1 0.60035 1 0.75835 1 0.66383 1 0.38305 1 0.72919 1 0.24947 1 0.72865 1 0.023594 1 0.56504 1 0.83537 1 0.24094 1 8p loss 125 (45%) 153 0.94823 1 0.12586 1 0.0055799 1 0.62972 1 0.02783 1 0.00269 1 0.89352 1 0.15066 1 0.13836 1 0.05008 1 0.070279 1 0.38771 1 8q loss 22 (8%) 256 0.9198 1 0.18101 1 0.20188 1 0.00198 1 0.04576 1 0.092649 1 1 1 0.78986 1 0.2441 1 0.011314 1 1 1 1 1 9p loss 116 (42%) 162 0.79221 1 0.10417 1 0.42568 1 0.96895 1 0.5872 1 0.74735 1 0.41768 1 0.29431 1 0.30365 1 0.86946 1 0.83913 1 1 1 9q loss 110 (40%) 168 0.42039 1 0.21117 1 0.64746 1 0.59247 1 0.71019 1 0.7158 1 0.41111 1 0.58648 1 0.010882 1 0.87963 1 0.52093 1 1 1 10p loss 49 (18%) 229 0.68135 1 0.67171 1 0.80969 1 0.9209 1 0.46215 1 0.45172 1 1 1 0.92255 1 0.024924 1 0.35567 1 0.00281 1 1 1 10q loss 87 (31%) 191 0.8453 1 0.13542 1 0.59024 1 0.54617 1 0.69931 1 0.37071 1 1 1 0.15619 1 0.63447 1 0.65277 1 0.28758 1 0.63822 1 11p loss 113 (41%) 165 0.45922 1 0.045745 1 0.01878 1 0.27372 1 0.10334 1 0.10438 1 0.89181 1 0.26011 1 0.40737 1 0.033046 1 0.13089 1 1 1 11q loss 81 (29%) 197 0.96125 1 0.63877 1 0.67167 1 0.62422 1 0.12276 1 0.68473 1 0.3047 1 0.5349 1 0.64384 1 0.62943 1 0.18333 1 0.32652 1 12p loss 33 (12%) 245 0.92945 1 0.71177 1 0.22228 1 0.81201 1 0.095699 1 0.37947 1 0.83599 1 0.69914 1 0.056107 1 0.036662 1 0.31508 1 0.46859 1 12q loss 34 (12%) 244 0.79277 1 0.16545 1 0.04613 1 0.78899 1 0.01832 1 0.29317 1 0.4147 1 0.86215 1 0.17794 1 0.019041 1 0.27035 1 1 1 13q loss 52 (19%) 226 0.35761 1 0.6215 1 0.88443 1 0.78152 1 0.33336 1 0.44428 1 0.30308 1 0.4928 1 0.52752 1 0.79113 1 0.12503 1 1 1 14q loss 77 (28%) 201 0.54406 1 0.23775 1 0.23472 1 0.90759 1 0.02954 1 0.80788 1 0.37017 1 0.78767 1 0.2296 1 0.13137 1 0.76683 1 0.61398 1 15q loss 93 (33%) 185 0.69431 1 0.34842 1 0.37728 1 0.23313 1 0.9871 1 0.0090199 1 0.7768 1 0.18177 1 0.39783 1 0.43193 1 0.0226 1 0.33589 1 16p loss 68 (24%) 210 0.29231 1 0.96156 1 0.44613 1 0.12653 1 0.65924 1 0.0081199 1 0.87665 1 0.83356 1 0.6831 1 0.99562 1 0.093269 1 0.60198 1 16q loss 63 (23%) 215 0.79804 1 0.71677 1 0.89785 1 0.64672 1 0.24168 1 0.0043 1 0.52259 1 0.51584 1 0.85261 1 0.29929 1 0.55501 1 0.32884 1 17p loss 117 (42%) 161 0.65459 1 0.15001 1 0.88091 1 0.89482 1 0.38225 1 0.68365 1 0.78628 1 0.63112 1 0.46154 1 0.787 1 0.61449 1 0.65234 1 17q loss 26 (9%) 252 0.60205 1 0.5471 1 0.48899 1 0.35467 1 0.082769 1 0.31961 1 0.48969 1 0.5552 1 0.99028 1 0.34663 1 0.0095899 1 1 1 18p loss 67 (24%) 211 0.29947 1 0.98946 1 0.15578 1 0.29478 1 0.19961 1 0.14807 1 0.27798 1 0.067636 1 0.80838 1 0.10868 1 0.82767 1 0.087074 1 18q loss 96 (35%) 182 0.070117 1 0.8144 1 0.34846 1 0.38623 1 0.6531 1 0.49385 1 0.77817 1 0.67187 1 0.7728 1 0.27377 1 0.96227 1 0.33985 1 19p loss 68 (24%) 210 0.004565 1 0.083844 1 0.03828 1 0.02125 1 0.01465 1 0.068789 1 0.7559 1 0.57089 1 0.825 1 0.46572 1 0.00483 1 0.59621 1 19q loss 40 (14%) 238 0.019779 1 0.46531 1 0.71184 1 0.04243 1 0.431 1 0.081349 1 0.84875 1 0.30639 1 0.62406 1 0.9071 1 0.095319 1 1 1 20p loss 21 (8%) 257 0.84142 1 0.15082 1 0.23662 1 0.1645 1 0.54023 1 0.70272 1 0.45288 1 0.4972 1 0.14471 1 0.31436 1 0.34419 1 1 1 20q loss 9 (3%) 269 0.045866 1 0.43362 1 0.52789 1 1 1 0.55993 1 0.46056 1 0.71125 1 0.43944 1 0.50856 1 0.50151 1 0.26929 1 1 1 21q loss 44 (16%) 234 0.12305 1 0.38126 1 0.17796 1 0.73158 1 0.01145 1 0.19869 1 0.71744 1 0.29137 1 0.52528 1 0.67726 1 0.6412 1 1 1 22q loss 106 (38%) 172 0.31142 1 0.27064 1 0.03732 1 0.20131 1 0.071219 1 0.00052999 0.508 1 1 0.27325 1 0.7577 1 0.049584 1 0.21401 1 0.070791 1 xq loss 54 (19%) 224 0.46479 1 0.86593 1 0.80869 1 0.82242 1 0.54513 1 0.90944 1 0.61204 1 0.56672 1 0.58414 1 0.898 1 0.84376 1 0.2263 1