tcga_participant_barcode CLI_age CLI_vitalstatus CLI_daystodeath CLI_daystolastfollowup CLI_primarysiteofdisease CLI_neoplasm.diseasestage CLI_pathology.T.stage CLI_pathology.N.stage CLI_pathology.M.stage CLI_dccuploaddate CLI_gender CLI_dateofinitialpathologicdiagnosis CLI_daystolastknownalive CLI_radiationtherapy CLI_histologicaltype CLI_radiations.radiation.regimenindication CLI_number.of.lymph.nodes CLI_race CLI_ethnicity CLI_batchnumber CLUS_mRNA_cNMF CLUS_mRNA_cHierarchical CLUS_CN_cNMF CLUS_Methlyation_cNMF CLUS_RPPA_cNMF CLUS_RPPA_cHierarchical CLUS_mRNAseq_cNMF CLUS_mRNAseq_cHierarchical CLUS_miRseq_cNMF CLUS_miRseq_cHierarchical CLUS_miRseq_Mature_cNMF CLUS_miRseq_Mature_cHierarchical SMG_mutsig2.0_AARS SMG_mutsig2.0_ACTL6B SMG_mutsig2.0_APC_cosmic SMG_mutsig2.0_AQP12A SMG_mutsig2.0_ARID1A SMG_mutsig2.0_ASB10 SMG_mutsig2.0_C1QTNF5 SMG_mutsig2.0_CASP8 SMG_mutsig2.0_CBFB SMG_mutsig2.0_CDH1 SMG_mutsig2.0_CDKN1B SMG_mutsig2.0_CTCF SMG_mutsig2.0_EPDR1 SMG_mutsig2.0_ERBB2 SMG_mutsig2.0_FAM20C SMG_mutsig2.0_FAM86B1 SMG_mutsig2.0_FAM86B2 SMG_mutsig2.0_FBXW7 SMG_mutsig2.0_FOXA1 SMG_mutsig2.0_GATA3 SMG_mutsig2.0_GPS2 SMG_mutsig2.0_HIST1H2BC SMG_mutsig2.0_HIST1H3B SMG_mutsig2.0_HLA-DRB5 SMG_mutsig2.0_KRAS SMG_mutsig2.0_MAP2K4 SMG_mutsig2.0_MAP3K1 SMG_mutsig2.0_MLL3 SMG_mutsig2.0_MYB SMG_mutsig2.0_NCOR1 SMG_mutsig2.0_PIK3CA SMG_mutsig2.0_PIK3R1 SMG_mutsig2.0_PIWIL1 SMG_mutsig2.0_PTEN SMG_mutsig2.0_PTHLH SMG_mutsig2.0_PTPN22_cosmic SMG_mutsig2.0_RAB42 SMG_mutsig2.0_RB1 SMG_mutsig2.0_RPGR SMG_mutsig2.0_RUNX1 SMG_mutsig2.0_SF3B1 SMG_mutsig2.0_SMAD2_cosmic SMG_mutsig2.0_SMAD4_cosmic SMG_mutsig2.0_TAF1L_cosmic SMG_mutsig2.0_TBL1XR1 SMG_mutsig2.0_TBX3 SMG_mutsig2.0_TCP10 SMG_mutsig2.0_THEM5 SMG_mutsig2.0_TP53 SMG_mutsig2.0_VCPIP1_cosmic SMG_mutsig2.0_WSCD2 SMG_mutsig2.0_ZFP36L1 SMG_mutsig2.0_ZFP36L2 SMG_mutsig.CV_ABCA8 SMG_mutsig.CV_AKD1 SMG_mutsig.CV_ANKRD12 SMG_mutsig.CV_APC_cosmic SMG_mutsig.CV_AQP12A SMG_mutsig.CV_ARID1A SMG_mutsig.CV_ASB10 SMG_mutsig.CV_ATXN2 SMG_mutsig.CV_ATXN7L1 SMG_mutsig.CV_CASP8 SMG_mutsig.CV_CBFB SMG_mutsig.CV_CCL13 SMG_mutsig.CV_CCNL2 SMG_mutsig.CV_CDH1 SMG_mutsig.CV_CDKN1B SMG_mutsig.CV_COL6A5 SMG_mutsig.CV_CTCF SMG_mutsig.CV_DLX6 SMG_mutsig.CV_DNAH12 SMG_mutsig.CV_DST SMG_mutsig.CV_ERBB2_cosmic SMG_mutsig.CV_ERBB3 SMG_mutsig.CV_FAM86B1 SMG_mutsig.CV_FBXO17 SMG_mutsig.CV_FBXW7 SMG_mutsig.CV_FHOD3 SMG_mutsig.CV_FOXA1 SMG_mutsig.CV_FXYD5 SMG_mutsig.CV_GATA3 SMG_mutsig.CV_GPRIN2 SMG_mutsig.CV_GPS2 SMG_mutsig.CV_GRHL2 SMG_mutsig.CV_GYG2 SMG_mutsig.CV_HIST1H3B SMG_mutsig.CV_HLA-C SMG_mutsig.CV_HRNR SMG_mutsig.CV_ICOSLG SMG_mutsig.CV_MAP2K4 SMG_mutsig.CV_MAP3K1 SMG_mutsig.CV_MLC1 SMG_mutsig.CV_MLL3 SMG_mutsig.CV_MORN1 SMG_mutsig.CV_MYB SMG_mutsig.CV_MYH9 SMG_mutsig.CV_NCOR1 SMG_mutsig.CV_NFE2L3 SMG_mutsig.CV_OR2T35 SMG_mutsig.CV_OR4D10 SMG_mutsig.CV_OR6C76 SMG_mutsig.CV_PIK3CA SMG_mutsig.CV_PIK3R1 SMG_mutsig.CV_PPEF1 SMG_mutsig.CV_PRICKLE3 SMG_mutsig.CV_PTEN SMG_mutsig.CV_PTHLH SMG_mutsig.CV_PTPN22_cosmic SMG_mutsig.CV_RB1 SMG_mutsig.CV_RPGR SMG_mutsig.CV_RUNX1 SMG_mutsig.CV_SHISA4 SMG_mutsig.CV_SMAD2_cosmic SMG_mutsig.CV_SMAD4_cosmic SMG_mutsig.CV_SPRR2B SMG_mutsig.CV_TAF1L_cosmic SMG_mutsig.CV_TBL1XR1 SMG_mutsig.CV_TBX3 SMG_mutsig.CV_THEM5 SMG_mutsig.CV_TMEM151B SMG_mutsig.CV_TP53 SMG_mutsig.CV_UBC SMG_mutsig.CV_VCPIP1_cosmic SMG_mutsig.CV_WDR52 SMG_mutsig.CV_XBP1 SMG_mutsig.CV_ZFP36L1 SMG_mutsig.CV_ZFP36L2 SMG_mutsig.CV_ZNF41 SMG_mutsig.2CV_ACTL6B SMG_mutsig.2CV_AKT2 SMG_mutsig.2CV_ANGPT4 SMG_mutsig.2CV_ANKRD12 SMG_mutsig.2CV_ANKRD20A4 SMG_mutsig.2CV_APC_cosmic SMG_mutsig.2CV_AQP12A SMG_mutsig.2CV_ARID1A SMG_mutsig.2CV_ASB10 SMG_mutsig.2CV_ATHL1 SMG_mutsig.2CV_BCORL1 SMG_mutsig.2CV_C15orf39 SMG_mutsig.2CV_C1QTNF5 SMG_mutsig.2CV_CABYR SMG_mutsig.2CV_CASP8 SMG_mutsig.2CV_CASZ1 SMG_mutsig.2CV_CBFB SMG_mutsig.2CV_CCDC82 SMG_mutsig.2CV_CDC42EP1 SMG_mutsig.2CV_CDH1 SMG_mutsig.2CV_CDKN1B SMG_mutsig.2CV_CEP57 SMG_mutsig.2CV_CTCF SMG_mutsig.2CV_CXCR3 SMG_mutsig.2CV_DLG1 SMG_mutsig.2CV_DNAH12 SMG_mutsig.2CV_DOCK11 SMG_mutsig.2CV_EIF4A2 SMG_mutsig.2CV_ERBB2 SMG_mutsig.2CV_FGFR2 SMG_mutsig.2CV_FOXA1 SMG_mutsig.2CV_FRMPD2 SMG_mutsig.2CV_FXYD5 SMG_mutsig.2CV_GATA3 SMG_mutsig.2CV_GPRIN2 SMG_mutsig.2CV_GPS2 SMG_mutsig.2CV_HIST1H3B SMG_mutsig.2CV_HLA-C SMG_mutsig.2CV_HRNR SMG_mutsig.2CV_ICOSLG SMG_mutsig.2CV_IRS4 SMG_mutsig.2CV_KCNN3 SMG_mutsig.2CV_KDM6A SMG_mutsig.2CV_KRAS SMG_mutsig.2CV_MAP2K4 SMG_mutsig.2CV_MAP3K1 SMG_mutsig.2CV_MED23 SMG_mutsig.2CV_MKL1 SMG_mutsig.2CV_MLL3 SMG_mutsig.2CV_MLL4 SMG_mutsig.2CV_MR1 SMG_mutsig.2CV_MUC6 SMG_mutsig.2CV_MYB SMG_mutsig.2CV_MYH9 SMG_mutsig.2CV_NBPF9 SMG_mutsig.2CV_NCOR1 SMG_mutsig.2CV_NF1 SMG_mutsig.2CV_OXCT2 SMG_mutsig.2CV_PAX2 SMG_mutsig.2CV_PCNXL2 SMG_mutsig.2CV_PIK3CA SMG_mutsig.2CV_PIK3R1 SMG_mutsig.2CV_PRICKLE3 SMG_mutsig.2CV_PSIP1 SMG_mutsig.2CV_PTEN SMG_mutsig.2CV_PTHLH SMG_mutsig.2CV_PTPN22_cosmic SMG_mutsig.2CV_RAB42 SMG_mutsig.2CV_RB1 SMG_mutsig.2CV_RBMX SMG_mutsig.2CV_RHBG SMG_mutsig.2CV_RHOA SMG_mutsig.2CV_RIBC1 SMG_mutsig.2CV_RPGR SMG_mutsig.2CV_RUNX1 SMG_mutsig.2CV_SDC1 SMG_mutsig.2CV_SF3B1 SMG_mutsig.2CV_SLC35B2 SMG_mutsig.2CV_SMAD2_cosmic SMG_mutsig.2CV_SMAD4_cosmic SMG_mutsig.2CV_SPEN SMG_mutsig.2CV_TAF1L_cosmic SMG_mutsig.2CV_TARBP2 SMG_mutsig.2CV_TBL1XR1 SMG_mutsig.2CV_TBX3 SMG_mutsig.2CV_TCP11 SMG_mutsig.2CV_TFE3 SMG_mutsig.2CV_TGS1 SMG_mutsig.2CV_THEM5 SMG_mutsig.2CV_TNRC6B SMG_mutsig.2CV_TP53 SMG_mutsig.2CV_TPP2 SMG_mutsig.2CV_TTPAL SMG_mutsig.2CV_USP36 SMG_mutsig.2CV_VCPIP1_cosmic SMG_mutsig.2CV_ZBTB7C SMG_mutsig.2CV_ZFP36L1 SMG_mutsig.2CV_ZMYM3 SMG_mutsig.2CV_ZNF362 SMG_mutsig.2CV_ZNF687 rate_non rate_sil SMG_AARS_mRNA SMG_ABCA8_mRNA SMG_AKD1_mRNA SMG_AKT2_mRNA SMG_ANGPT4_mRNA SMG_ANKRD12_mRNA SMG_ANKRD20A4_mRNA SMG_APC_mRNA SMG_ARID1A_mRNA SMG_ATHL1_mRNA SMG_ATXN2_mRNA SMG_ATXN7L1_mRNA SMG_BCORL1_mRNA SMG_C15orf39_mRNA SMG_CABYR_mRNA SMG_CASP8_mRNA SMG_CASZ1_mRNA SMG_CBFB_mRNA SMG_CCDC82_mRNA SMG_CCL13_mRNA SMG_CCNL2_mRNA SMG_CDC42EP1_mRNA SMG_CDH1_mRNA SMG_CDKN1B_mRNA SMG_CEP57_mRNA SMG_CTCF_mRNA SMG_CXCR3_mRNA SMG_DLG1_mRNA SMG_DLX6_mRNA SMG_DNAH12_mRNA SMG_DOCK11_mRNA SMG_DST_mRNA SMG_EIF4A2_mRNA SMG_EPDR1_mRNA SMG_ERBB2_mRNA SMG_ERBB3_mRNA SMG_FAM20C_mRNA SMG_FAM86B1_mRNA SMG_FAM86B2_mRNA SMG_FBXO17_mRNA SMG_FBXW7_mRNA SMG_FGFR2_mRNA SMG_FHOD3_mRNA SMG_FOXA1_mRNA SMG_FRMPD2_mRNA SMG_FXYD5_mRNA SMG_GATA3_mRNA SMG_GPRIN2_mRNA SMG_GPS2_mRNA SMG_GRHL2_mRNA SMG_GYG2_mRNA SMG_HIST1H2BC_mRNA SMG_HIST1H3B_mRNA SMG_HLA-C_mRNA SMG_HLA-DRB5_mRNA SMG_HRNR_mRNA SMG_ICOSLG_mRNA SMG_IRS4_mRNA SMG_KCNN3_mRNA SMG_KDM6A_mRNA SMG_KRAS_mRNA SMG_MAP2K4_mRNA SMG_MAP3K1_mRNA SMG_MED23_mRNA SMG_MKL1_mRNA SMG_MLC1_mRNA SMG_MLL3_mRNA SMG_MLL4_mRNA SMG_MORN1_mRNA SMG_MR1_mRNA SMG_MUC6_mRNA SMG_MYB_mRNA SMG_MYH9_mRNA SMG_NBPF9_mRNA SMG_NCOR1_mRNA SMG_NF1_mRNA SMG_NFE2L3_mRNA SMG_OXCT2_mRNA SMG_PAX2_mRNA SMG_PCNXL2_mRNA SMG_PIK3CA_mRNA SMG_PIK3R1_mRNA SMG_PIWIL1_mRNA SMG_PPEF1_mRNA SMG_PRICKLE3_mRNA SMG_PSIP1_mRNA SMG_PTEN_mRNA SMG_PTHLH_mRNA SMG_PTPN22_mRNA SMG_RAB42_mRNA SMG_RB1_mRNA SMG_RBMX_mRNA SMG_RHBG_mRNA SMG_RHOA_mRNA SMG_RIBC1_mRNA SMG_RPGR_mRNA SMG_RUNX1_mRNA SMG_SDC1_mRNA SMG_SF3B1_mRNA SMG_SHISA4_mRNA SMG_SLC35B2_mRNA SMG_SMAD2_mRNA SMG_SMAD4_mRNA SMG_SPEN_mRNA SMG_TAF1L_mRNA SMG_TARBP2_mRNA SMG_TBL1XR1_mRNA SMG_TBX3_mRNA SMG_TCP11_mRNA SMG_TFE3_mRNA SMG_TGS1_mRNA SMG_THEM5_mRNA SMG_TMEM151B_mRNA SMG_TNRC6B_mRNA SMG_TP53_mRNA SMG_TPP2_mRNA SMG_TTPAL_mRNA SMG_UBC_mRNA SMG_USP36_mRNA SMG_VCPIP1_mRNA SMG_WDR52_mRNA SMG_WSCD2_mRNA SMG_XBP1_mRNA SMG_ZBTB7C_mRNA SMG_ZFP36L1_mRNA SMG_ZFP36L2_mRNA SMG_ZMYM3_mRNA SMG_ZNF362_mRNA SMG_ZNF41_mRNA SMG_ZNF687_mRNA Amp_1p22.3 Amp_1q21.3 Amp_1q44 Amp_3p25.1 Amp_3q26.32 Amp_4q13.3 Amp_5p15.33 Amp_6p23 Amp_6q21 Amp_8p11.23 Amp_8p11.21 Amp_8q24.21 Amp_10p15.1 Amp_10q22.3 Amp_11p13 Amp_11q13.3 Amp_11q14.1 Amp_12p13.33 Amp_12q15 Amp_13q34 Amp_14q21.1 Amp_15q26.3 Amp_17p11.2 Amp_17q12 Amp_17q23.1 Amp_19p13.12 Amp_19q12 Amp_19q13.42 Amp_20q13.2 Del_1p36.13 Del_1p22.1 Del_2q37.3 Del_3p21.31 Del_4p16.3 Del_4q35.1 Del_5q11.2 Del_5q21.3 Del_6p25.3 Del_6q15 Del_6q27 Del_7p22.3 Del_7q36.1 Del_8p23.2 Del_9p23 Del_9p21.3 Del_9q21.11 Del_9q34.2 Del_10q23.31 Del_10q26.3 Del_11p15.5 Del_11q23.3 Del_12p13.1 Del_12q23.1 Del_12q24.31 Del_13q14.2 Del_14q24.1 Del_15q13.1 Del_16q24.3 Del_17p12 Del_17q21.31 Del_18q23 Del_19p13.3 Del_19q13.32 Del_20p13 Del_21q11.2 Del_22q13.32 CN_10p_Amp CN_10q_Amp CN_11p_Amp CN_11q_Amp CN_12p_Amp CN_12q_Amp CN_13q_Amp CN_14q_Amp CN_15q_Amp CN_16p_Amp CN_16q_Amp CN_17p_Amp CN_17q_Amp CN_18p_Amp CN_18q_Amp CN_19p_Amp CN_19q_Amp CN_1p_Amp CN_1q_Amp CN_20p_Amp CN_20q_Amp CN_21q_Amp CN_22q_Amp CN_2p_Amp CN_2q_Amp CN_3p_Amp CN_3q_Amp CN_4p_Amp CN_4q_Amp CN_5p_Amp CN_5q_Amp CN_6p_Amp CN_6q_Amp CN_7p_Amp CN_7q_Amp CN_8p_Amp CN_8q_Amp CN_9p_Amp CN_9q_Amp CN_Xq_Amp CN_10p_Del CN_10q_Del CN_11p_Del CN_11q_Del CN_12p_Del CN_12q_Del CN_13q_Del CN_14q_Del CN_15q_Del CN_16p_Del CN_16q_Del CN_17p_Del CN_17q_Del CN_18p_Del CN_18q_Del CN_19p_Del CN_19q_Del CN_1p_Del CN_1q_Del CN_20p_Del CN_20q_Del CN_21q_Del CN_22q_Del CN_2p_Del CN_2q_Del CN_3p_Del CN_3q_Del CN_4p_Del CN_4q_Del CN_5p_Del CN_5q_Del CN_6p_Del CN_6q_Del CN_7p_Del CN_7q_Del CN_8p_Del CN_8q_Del CN_9p_Del CN_9q_Del CN_Xq_Del mRNA_CNMF_IL16_0.44_1 mRNA_CNMF_MMP14_1.05_1 mRNA_CNMF_MUM1L1_2.45_1 mRNA_CNMF_FLJ10357_0.44_1 mRNA_CNMF_GP1BA_-0.61_1 mRNA_CNMF_FOXP4_-0.42_1 mRNA_CNMF_FAM129C_-0.45_1 mRNA_CNMF_SLC6A2_-0.49_1 mRNA_CNMF_CPSF4_-0.33_1 mRNA_CNMF_APCDD1_0.58_2 mRNA_CNMF_CCKBR_-0.53_2 mRNA_CNMF_STON1_0.63_2 mRNA_CNMF_IRX6_-0.32_2 mRNA_CNMF_PSMD14_-0.3_2 mRNA_CNMF_AKAP8_-0.33_2 mRNA_CNMF_ITGA2B_-0.24_2 mRNA_CNMF_ABI3BP_0.88_2 mRNA_CNMF_BTBD3_-0.3_3 mRNA_CNMF_DUSP4_-0.75_3 mRNA_CNMF_DCXR_0.38_3 mRNA_CNMF_PIGG_0.25_3 mRNA_CNMF_ZNF417_0.21_3 mRNA_CNMF_MCAM_-0.32_3 mRNA_CNMF_LILRA1_-0.22_3 mRNA_CNMF_CHDH_0.47_3 mRNA_CNMF_MKL1_-0.19_3 mRNA_CNMF_ADAMTS8_-0.39_4 mRNA_CNMF_WFDC13_-0.25_4 mRNA_CNMF_PPP1R9B_-0.23_4 mRNA_CNMF_GAS2_0.76_4 mRNA_CNMF_RPS25_0.25_4 mRNA_CNMF_DDOST_0.22_4 mRNA_CNMF_RCAN2_0.43_4 mRNA_CNMF_LMBRD1_-0.27_4 mRNA_CNMF_IFI44_-0.64_5 mRNA_CNMF_TIMM50_-0.18_5 mRNA_CNMF_SCN8A_-0.4_5 mRNA_CNMF_CAMK1G_-0.22_5 mRNA_CNMF_FLJ14107_0.22_5 mRNA_CNMF_FOXJ1_0.57_5 mRNA_CNMF_GCDH_0.25_5 mRNA_CNMF_FKBP2_0.34_5 mRNA_CNMF_GPR160_0.85_6 mRNA_CNMF_TMEM100_-0.76_6 mRNA_CNMF_PLXNB3_0.51_6 mRNA_CNMF_COMTD1_0.7_6 mRNA_CNMF_GLOD4_-0.31_6 mRNA_CNMF_RNF152_0.73_6 mRNA_CNMF_PRPSAP1_-0.5_6 mRNA_CNMF_OLAH_-0.56_6 mRNA_CNMF_NFIX_-0.58_6 mRNA_CNMF_HS3ST3B1_0.71_7 mRNA_CNMF_CACNB2_-0.32_7 mRNA_CNMF_ARMC10_-0.43_7 mRNA_CNMF_HYAL3_-0.63_7 mRNA_CNMF_FCRL5_1.63_7 mRNA_CNMF_TMEM173_0.54_7 mRNA_CNMF_CMKLR1_1.03_7 mRNA_CNMF_MGC29506_1.37_7 mRNA_CNMF_SBSN_-0.92_7 mRNA_CNMF_NACA_0.26_8 mRNA_CNMF_UNC45B_0.36_8 mRNA_CNMF_VPS4A_-0.19_8 mRNA_CNMF_KRTAP17-1_-0.42_8 mRNA_CNMF_SLC35F2_-0.45_8 mRNA_CNMF_ATP1B2_0.21_8 mRNA_CNMF_MOSPD1_-0.24_8 mRNA_CNMF_CRYL1_0.37_8 Amp_CCND1_11q13.3_mRNA Amp_CCNE1_19q12_mRNA Amp_COX18_4q13.3_mRNA Amp_ERBB2_17q12_mRNA Amp_ERCC5_13q34_mRNA Amp_FH_1q44_mRNA Amp_FOXA1_14q21.1_mRNA Amp_IGF1R_15q26.3_mRNA Amp_INTS4_11q14.1_mRNA Amp_KDM5A_12p13.33_mRNA Amp_MCL1_1q21.3_mRNA Amp_MYC_8q24.21_mRNA Amp_PIK3CA_3q26.32_mRNA Amp_SMYD3_1q44_mRNA Amp_TERT_5p15.33_mRNA Amp_TUBD1_17q23.1_mRNA Amp_ZNF217_20q13.2_mRNA Del_ABL1_9q34.2_mRNA Del_ANKS1B_12q23.1_mRNA Del_BCL10_1p22.1_mRNA Del_BCL7A_12q24.31_mRNA Del_BRCA1_17q21.31_mRNA Del_BRD3_9q34.2_mRNA Del_CARD11_7p22.3_mRNA Del_CBFA2T3_16q24.3_mRNA Del_CDKN1B_12p13.1_mRNA Del_CDKN2A_9p21.3_mRNA Del_CSMD1_8p23.2_mRNA Del_ETV4_17q21.31_mRNA Del_FANCA_16q24.3_mRNA Del_FAT1_4q35.1_mRNA Del_FNBP1_9q34.2_mRNA Del_GPHN_14q24.1_mRNA Del_HRAS_11p15.5_mRNA Del_IL6ST_5q11.2_mRNA Del_IRF4_6p25.3_mRNA Del_MAP2K4_17p12_mRNA Del_MAX_14q24.1_mRNA Del_MLLT4_6q27_mRNA Del_NOTCH1_9q34.2_mRNA Del_NUP214_9q34.2_mRNA Del_PAFAH1B2_11q23.3_mRNA Del_PAX7_1p36.13_mRNA Del_PCSK7_11q23.3_mRNA Del_PDE4D_5q11.2_mRNA Del_POU2AF1_11q23.3_mRNA Del_PTEN_10q23.31_mRNA Del_PTPRD_9p23_mRNA Del_RALGDS_9q34.2_mRNA Del_RB1_13q14.2_mRNA Del_RBM15_1p22.1_mRNA Del_RPL5_1p22.1_mRNA Del_SDHB_1p36.13_mRNA Del_SDHD_11q23.3_mRNA Del_STAT3_17q21.31_mRNA Del_TCF3_19p13.3_mRNA Del_TSC1_9q34.2_mRNA Del_TSHR_14q24.1_mRNA TCGA-5T-A9QA 52 0 NA 12 breast stage ib t2 nx mx 2-10-2014 female 2013 NA NA infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 379.6.0 NA NA 1 NA NA NA 1 1 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 13.06869889 NA 5.57271084 11.02129365 NA 8.92910363 NA 8.60794943 9.94296836 10.08102932 9.87949993 6.52434895 6.87227225 10.19805970 7.28408562 8.04505684 9.62525039 9.72223597 5.01911476 0.64984535 10.46846215 11.96635007 14.16640079 10.52793086 9.23484257 10.61998590 3.92290189 9.74175600 0.06488285 -0.93511715 4.42246850 10.14573502 12.28060214 7.74439726 13.54992912 12.91822704 10.67455793 8.03933199 4.52435209 2.38683853 7.55677043 9.94066685 4.55677273 12.99989831 -0.93511715 9.68788443 13.71910594 3.70877214 10.26554027 11.42164451 5.83310261 9.85282005 NA 13.75579994 7.76188494 2.38683853 8.14706650 NA 1.87227718 8.99269537 9.75316777 9.44537848 9.78772499 9.05502153 10.46792951 NA 9.75141803 10.48435105 5.29373464 7.58455368 NA 10.35031966 15.33831243 7.90361738 11.08102932 10.53048388 6.44862183 0.06488285 5.04219780 6.81980483 7.89780735 7.26458991 NA 3.70877214 6.75141819 10.16492276 11.09109510 1.64989133 3.92290189 3.87227718 9.61084731 11.26734747 7.92600416 13.16689314 5.88509599 7.00155569 10.49223035 11.81457742 12.15585689 8.90254545 11.19580975 10.75883998 10.83728157 9.93605265 3.38685232 9.28771238 11.52255485 11.95556175 NA 9.50370928 9.07614486 2.97181023 5.02027550 9.88190103 11.23264925 9.57765787 9.20062671 15.65776865 10.97068055 9.03070189 7.12019951 1.38686612 15.54551837 6.50786122 11.25535951 12.06244984 9.44754159 8.44646054 6.47430786 11.01870288 0.3879900 1.2389000 1.4936000 0.0000000 0.0220170 0.0306730 0.0185500 0.5257200 -0.5617700 3.6569000 2.4540000 0.5634600 0.5157600 0.5323800 0.4818100 3.6569000 3.6158000 -0.0037463 -0.0037463 0.0041564 -0.0179480 -0.0533480 0.2780700 0.2780700 0.3336600 -0.1221300 -0.1221300 -0.1221300 0.4554700 -0.6465000 -0.5702200 0.4893900 0.0000000 0.0306730 0.0428240 0.0185500 0.0185500 0.5257200 -0.5617700 -0.5730900 -0.4587200 -0.4731100 -0.6024500 -0.0143720 -0.0143720 -0.0143720 -0.0556510 0.5323800 -0.6409200 0.4652100 -0.5806800 -0.0037463 -0.0037463 -0.0037463 0.0041564 -0.0179480 -0.0400800 -0.0491610 0.2965900 0.2780700 -0.0276780 -0.1221300 -0.1221300 -0.6713200 0.0315700 0.9053000 -0.044 -0.560 -0.113 -0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.905 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 -0.044 -0.560 -0.113 -0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.905 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 6.07614432 10.41253883 1.87227718 6.73734335 2.68079693 10.62525030 0.64984535 NA 8.82978900 8.64611800 NA 4.76535970 -0.93511715 10.35378354 9.72312899 1.38686612 2.76536501 8.76709031 9.09282346 11.58234082 9.35643348 7.04791132 9.81311034 NA 9.91119137 10.46792951 1.38686612 NA 11.34655778 3.97181023 12.06139097 12.04344919 5.23484233 8.78601668 7.89464014 10.14773178 3.70877214 -0.93511715 -0.93511715 5.42246850 9.39134693 9.66668825 10.89226017 -0.93511715 7.46015197 7.46152201 11.05643931 7.29853735 10.47483876 NA 8.42905225 1.64989133 11.08555027 9.50087932 7.46976065 NA 6.97780653 5.60407726 8.77916285 NA 13.58461515 0.06488285 11.02528147 NA 5.89780674 3.97181023 7.35031955 9.66297006 14.779641 7.076144 8.452935 13.549929 10.106577 11.494586 12.999898 10.904515 10.915030 9.926004 12.206546 10.655505 7.897807 8.186451 1.386866 8.155030 11.160974 10.6395110 5.2146649 7.8164615 7.7514182 8.9166665 9.4954431 4.7928397 9.3234836 10.5279309 5.3686985 NA 7.2298244 8.6335765 10.0256434 7.2645899 6.7451714 10.0429128 8.6685439 NA 9.4453785 10.3234836 8.6869693 9.3514753 10.4008660 7.2197358 5.1093104 8.8312642 4.3128467 -0.9351171 11.0910951 5.1310050 10.4405000 9.6108473 7.7962363 12.9346077 9.9657843 9.7696856 12.7662239 10.6089159 9.9875019 0.6498454 TCGA-A1-A0SB 70 0 NA 259 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA other specify yes 0 white not hispanic or latino 117.51.0 NA NA 2 1 NA NA 2 5 3 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 5.562279e-08 11.7529198 6.9317516 6.9156918 11.0766170 -1.1504010 11.4308034 1.6569539 11.0829229 12.2326320 8.2904719 9.6888066 8.1373150 9.0132526 9.7130148 7.8857763 9.0418957 10.2349260 10.5042388 9.2202903 -1.1504010 10.4387857 10.8243759 14.5225253 9.9724307 10.4061089 10.8407703 1.1715271 10.8081555 6.7075841 3.0975265 5.6044895 13.6908231 12.6868365 7.8211464 12.7124338 12.0742075 8.3770799 7.2246423 4.4934616 9.3682559 9.5885394 12.9979205 10.2563393 9.0651358 0.8495990 10.2295227 9.2322269 8.9568199 9.3405640 10.8421871 7.6407655 1.6569539 -1.1504010 12.5014124 9.5544402 6.9788855 8.3534287 NA 1.8495990 9.9607384 9.6895939 9.9542015 11.5398191 10.3682560 11.0978269 11.3933597 12.0874103 10.7141759 6.5220275 7.1350053 0.4345615 9.5325973 15.3655798 8.7181630 11.7166884 11.8900638 8.1350048 4.1350012 NA 9.2935822 9.0639219 13.9541606 NA -0.1504010 7.0687718 10.0511142 11.3044161 4.0975265 3.3731610 2.7564896 10.4984098 12.6031330 -1.1504010 13.1366658 3.8495990 6.8552273 12.0302890 12.4882650 13.0017292 6.7013522 10.9393843 11.3344257 11.4878486 12.7050553 5.2419202 8.5910697 11.5347896 11.2085287 -0.1504010 9.9344112 9.5299622 4.6309645 4.8054266 10.7087493 12.1136055 10.4204072 9.0832224 14.5716632 10.4766806 9.5343513 8.0418957 8.2049540 12.0909902 10.9317518 13.5870614 11.9397152 10.6379133 10.4970612 8.4041917 9.9562378 0.00208050 0.00208050 0.00208050 0.00000000 0.00000000 -0.00069303 -0.00857080 -0.00041585 -0.00041585 0.00208050 0.00208050 0.00208050 -0.00138580 -0.00138580 0.00083195 0.00083195 0.00083195 -0.00152430 -0.00152430 -0.00553750 -0.00013862 0.00180300 -0.00180140 -0.00180140 -0.00058454 0.00541390 0.00541390 0.00541390 -0.00207840 0.00208050 0.00208050 -0.00101780 0.00000000 -0.00069303 -0.00069303 0.00083195 0.00083195 -0.00041585 -0.00041585 -0.01161100 0.00555290 0.00297270 0.00208050 -0.00767380 -0.00767380 0.00180300 -0.00016270 -0.00138580 -0.00518150 0.00083195 -0.00124730 -0.00152430 0.00013863 0.00013863 0.00013863 -0.00013862 -0.00512270 0.00194180 -0.00180140 0.00152550 -0.00055444 0.00541390 0.00541390 -0.00207840 0.00055459 0.01628600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.5325975 12.1466623 1.6569539 10.4336257 4.9156930 11.5470048 0.8495990 0.8495990 8.6456426 11.3324108 -0.1504010 8.6997897 4.0195240 9.6689835 9.6119849 2.4345615 7.2027498 10.0126234 8.7684659 9.1905655 9.5580745 7.7594961 10.3697304 2.7564896 10.5804974 11.0978269 3.0195240 -1.1504010 10.0232799 8.9397153 13.7644083 12.7848599 7.4041913 9.9257504 7.6375052 9.2600541 5.8382887 -1.1504010 1.6569539 7.1396220 9.0381917 9.0468195 6.7744155 5.7684649 8.3410553 5.3887613 10.2811004 7.6601742 10.1193139 1.8495990 13.9121549 0.8495990 5.6309616 9.5822705 6.0429813 0.8495990 8.2202903 10.9430204 1.1715271 0.4345615 14.9053301 -1.1504010 10.7587458 NA 10.1550946 5.2758675 8.0044211 8.6011468 13.581344 5.838289 8.390699 12.712434 10.478048 10.337443 9.065136 11.898260 9.334013 11.389731 13.995694 12.920395 9.063922 7.125728 2.550039 7.973724 11.061491 11.6375054 7.3293829 9.1140455 9.8747424 8.5430898 10.8461257 5.2071549 5.0195285 9.9724307 5.9264194 5.4934584 7.8691934 7.7670641 15.2448357 10.5560989 8.6633841 8.3573976 10.3314022 1.1715271 9.9542015 10.0897979 12.0137241 11.8103288 11.2650805 9.6334196 -1.1504010 8.8191333 9.6607206 5.0784220 11.3044161 10.5659936 11.0425120 10.4984098 8.2397718 15.5657658 9.7444206 10.3419567 12.7334870 11.0886045 10.0523389 0.4345615 TCGA-A1-A0SD 59 0 NA 437 breast stage iia t2 n0 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 1 1 1 NA NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 5.562279e-08 11.09260725 7.65206553 7.32597908 11.46770193 -0.01086099 10.26600069 NA 10.12993067 11.52096959 8.49027449 10.25822752 8.00405132 9.10023656 9.53792268 6.51266304 7.97589095 9.81617888 9.66211540 7.56652978 4.01884779 9.87378014 9.87733675 13.67880768 11.99589442 9.09326279 10.59427169 5.39282228 10.20058356 0.40414017 -0.01086099 8.43066162 13.11790073 12.58218066 7.66623324 13.66472714 12.84727614 10.09151406 6.59889516 3.31102349 7.21791990 8.94717023 9.26367319 8.73281323 12.98698596 2.21147951 10.43583952 13.66432281 5.27450395 9.11153190 10.85173819 8.31102894 7.55642328 -0.01086099 14.31227525 9.38713202 1.40414017 8.34958201 0.72604646 5.07656337 10.16444250 10.24255440 9.81087476 10.48128784 10.34298279 9.73897028 2.49159659 11.74579615 10.21149326 5.77917828 8.35542290 5.61359059 9.56085345 14.74527489 8.87596585 11.23207640 11.68055358 8.69415727 2.10457150 3.65206194 8.51918215 9.40835883 11.23445545 -0.01086099 5.95872670 7.01146880 9.85431862 10.87327138 5.39282228 5.73505637 4.28678506 10.29706058 11.66902070 5.41536658 13.75725069 5.18549790 7.83668033 12.06246141 12.95764765 12.87002354 8.24805944 10.15023268 10.66887417 10.25688246 11.02367057 5.09063752 7.88391890 11.49689546 12.21962171 0.72604646 10.44545525 8.69990728 2.79645240 3.61397948 9.29135905 10.32560734 9.55197928 9.33265670 15.37205128 10.13035652 9.88088461 8.06769625 5.01884779 15.43066178 7.82620334 12.94244855 11.67209544 9.95632707 9.46348289 8.48894675 11.07103693 1.3198000 1.2241000 0.1048200 -0.0018014 -0.0115610 -0.0065050 0.0000000 0.0255310 0.0255310 -0.0047079 -0.0047079 0.4166400 0.1030700 0.5245000 0.0086135 0.6068400 0.5140300 0.0000000 0.0000000 -0.5320500 0.0130740 0.5252000 -0.5152700 0.0255060 0.0255060 -0.4947500 0.0384890 0.0384890 0.5517700 -0.5208200 -0.4360400 -0.0096806 -0.0018014 -0.0065050 -0.0065050 0.0000000 0.0000000 0.0255310 0.0255310 0.0255310 0.0000000 0.0000000 0.0160060 -0.5564700 1.3893000 0.0088920 0.0088920 -0.0058140 0.0115390 0.0086135 -0.5415600 0.0000000 0.0000000 0.0000000 -0.5320500 0.0130740 0.0056919 -0.5628500 -0.5152700 0.0255060 -0.5195500 -0.4947500 0.0384890 0.5306200 0.0132130 -0.5176400 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 8.60135519 13.21806980 7.96255886 10.25393433 2.37406572 11.03075996 1.57405305 2.49159659 8.52178140 8.35978821 -1.59596886 8.78020936 3.40414017 9.97873191 9.00219084 1.40414017 9.01884806 10.25588732 9.66034698 9.97589095 9.76113498 7.99472566 11.58560124 2.21147951 8.78784250 9.73897028 4.94329781 -1.59596886 10.62934578 2.86356187 12.26880815 11.58358095 8.40835862 10.45806420 10.24412939 9.17149508 5.68953959 2.40414017 -0.01086099 2.49159659 7.97399405 8.67560143 10.31253097 5.11838465 8.26871135 8.07479441 9.90298749 6.76608228 9.75673360 NA 10.85895169 2.31103803 7.74621332 9.76732043 4.91573122 4.94329781 9.78514052 8.44305750 6.71247748 0.72604646 13.62979767 0.98906633 10.27411766 NA 7.98345425 6.40413846 8.04979683 8.99752952 14.2534946 5.1183846 8.1904079 13.6647271 9.7495437 10.1269459 12.9869860 13.1980464 9.5507070 10.9647100 14.2135799 11.1104185 9.4083588 8.6160268 0.9890663 7.5100465 12.2293953 11.298956 6.757285 9.086255 9.311029 8.094136 10.702401 6.364140 8.132059 11.995894 7.155682 1.726046 6.346652 6.817935 12.035656 10.328209 9.023441 8.995661 12.200482 6.298957 9.810875 10.526643 11.600894 10.097625 10.750652 9.004051 2.863562 8.875560 8.966190 6.464835 10.873271 7.118384 10.692047 10.297061 6.883919 13.084992 9.731691 9.960165 13.182678 9.764437 9.834068 2.652073 TCGA-A1-A0SE 56 0 NA 1321 breast stage i t1c n0 (i-) m0 2-10-2014 female 2005 NA NA mixed histology (please specify) yes 0 white not hispanic or latino 72.63.0 2 2 3 2 NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.224912e-07 11.3499910 6.3213347 6.8600465 11.4282232 0.3964883 10.3759472 -1.6034021 10.1925616 12.0953352 10.3250404 9.0075468 7.6420748 9.6974465 9.3702194 7.9758382 9.1489026 10.1597344 9.4666430 7.2576085 0.9814874 9.4746729 10.0658500 13.3515816 11.1793155 9.3521719 10.7074188 5.2294110 10.5980333 -0.0185857 2.3965157 7.7025834 13.3056651 12.0810515 7.2822183 13.1847305 13.7256526 9.4140264 8.3019091 5.3965226 7.3448888 8.4892792 9.5187029 8.4299452 12.9276598 2.7184603 9.9117290 13.6396216 7.0511578 9.2456535 11.0757822 8.3623064 8.2451448 -0.6034021 12.9903018 8.6023151 3.3965157 8.3738017 1.3965431 4.3507165 9.9987570 10.3426973 9.8898772 11.3746962 9.5212895 10.1647063 4.2294110 11.3982821 10.1278410 6.9356813 8.2482711 4.7184493 10.7416500 15.0980722 8.5540838 11.2376932 11.4161127 8.0865200 1.9814874 3.3965157 8.1004258 9.2095014 12.0945755 NA 5.9279036 7.2198897 10.0493669 10.8482483 7.0900086 5.2420117 4.3034155 10.2046818 11.9391912 2.4839834 13.6158418 6.4077487 7.1244429 12.6831520 12.5006293 12.8177979 8.8903774 10.4649644 11.1958037 10.8607537 11.3745174 5.0830218 8.3965222 12.3161302 12.1662566 -1.6034021 10.3919359 9.4679843 1.9814874 3.5262191 9.9936434 10.4793364 9.9982928 8.9673266 15.0378682 10.2447537 10.1223142 7.2070934 3.8559498 15.4536994 9.8539029 12.5734743 11.6727918 10.5770528 9.7612038 8.4971844 11.1229829 0.84415000 0.87249000 0.87249000 0.00813220 0.01153900 -0.00995650 0.00833510 0.00249690 -0.47628000 0.30263000 0.30263000 0.30362000 0.81298000 -0.06630600 0.00344410 1.52200000 0.02651400 0.00555290 0.00555290 -0.25414000 -0.00069303 -0.00705760 -0.50038000 -0.00802440 -0.00802440 -0.01216200 -0.01216200 -0.01216200 -0.02055700 -0.06007600 -0.04698900 0.00332990 0.01153900 -0.00995650 -0.00995650 0.00833510 0.00833510 0.00249690 -0.47628000 -0.49434000 0.00000000 0.00291330 0.30263000 0.00069327 0.00069327 0.00069327 0.00069327 -0.06630600 -0.06630600 0.01544700 -0.48134000 0.00555290 0.00402430 -0.49193000 -0.25467000 -0.00069303 -0.00705760 -0.53077000 -0.50038000 -0.00802440 -0.01326400 -0.01216200 -0.01216200 -0.00152430 -0.00235530 -0.05684600 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 8.8467023 13.3283214 10.4659718 10.1909379 3.8559498 10.9763094 0.3964883 1.5664255 8.7105389 9.0331466 0.3964883 8.0411176 2.6444562 10.1367245 9.0926203 1.8559498 8.7650285 9.3965219 10.4961986 10.4084481 9.6023214 7.5386289 10.4929078 2.4839834 10.2848847 10.1647063 4.7184493 NA 10.5443629 2.9200836 12.8928765 12.3579717 7.9701692 9.5076577 7.0760021 9.3094113 7.2699663 -0.0185857 -0.0185857 6.9279036 8.3375697 8.8712421 10.1447148 4.8227862 8.0875504 6.5813980 9.6691519 6.4021457 9.7952656 NA 11.3711158 2.7888319 4.7888371 9.7897193 6.8751301 4.9663797 9.0556260 7.4971844 7.4271888 -0.6034021 14.2498803 0.9814874 10.1597344 -1.6034021 7.2791648 5.5664468 7.6888434 8.7025838 13.707647 5.177882 8.427189 13.184731 10.006163 10.932040 12.927660 12.768435 9.261482 10.930338 12.949551 11.069831 9.209501 9.237300 -1.603402 7.181157 11.179520 11.461770 7.047573 8.673809 8.576431 8.888375 10.559329 6.011232 6.814375 11.179316 6.620523 7.245145 6.826974 6.653815 11.601246 10.126992 9.054733 8.465300 12.530387 5.440916 9.889877 10.243188 10.895870 9.839984 10.898359 8.988044 NA 8.853020 6.996435 6.424428 10.848248 7.390876 10.452143 10.204682 7.421662 14.411915 10.178291 9.861578 12.874976 10.739152 9.612055 1.396543 TCGA-A1-A0SF 54 0 NA 1463 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 117.51.0 NA NA 4 3 NA NA 3 3 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.39057e-07 10.9510319 6.2768874 7.6412288 11.9231338 3.8645031 9.5319300 NA 9.1356936 11.8326638 7.9937881 8.8404374 7.8350341 8.6489478 9.8809859 6.3620052 9.2116708 10.6695852 9.6921749 6.7938504 2.8645130 10.3142609 10.7632400 13.9820720 10.5414994 9.4036642 10.6075577 7.0716629 10.1230020 -0.2229696 4.2688984 7.8214366 12.5945258 12.2233504 7.0010444 12.9616079 13.6358006 8.7254095 6.7657270 4.0989669 7.0944546 8.1433648 9.7564676 7.8187017 12.6963714 3.0249756 10.6377415 13.5759698 4.9469694 9.6123744 10.5831892 7.1821838 4.0249668 -1.2229696 14.3091454 9.3440477 3.3620069 9.7924575 -1.2229696 4.7543210 9.2778844 9.8992234 9.0670613 11.1824499 10.0379620 10.3624745 3.0989753 11.2618654 10.3368975 6.9369135 6.8104650 10.2085401 11.1381638 14.9321374 6.5034648 10.6627389 10.7140484 8.4652929 2.5844094 4.7312376 8.1864332 8.8959836 12.3201951 NA 4.7770409 7.5940260 10.0070629 11.1575035 10.9356522 5.6596849 3.1693638 10.1235561 12.1120140 2.4774701 12.8533570 6.9419490 7.9494702 12.1065585 12.4346959 12.4593787 7.8323248 10.1051563 10.9588159 10.2684296 10.7938508 3.8645031 9.3544713 11.8816412 12.1676145 1.9469554 10.3783489 9.1843103 1.0989585 4.1734793 9.2588418 10.7603924 9.9625375 8.9381743 15.2633276 10.2147945 9.7586098 7.9816135 3.4209000 16.2229383 10.0285248 12.4393770 13.1598016 9.8809859 10.1163358 7.7195572 10.8987573 -0.3619300 0.6863400 1.0212000 -0.3705300 -0.0040665 0.0203430 -0.0074720 -0.0049844 -0.0049844 0.3209300 -0.7329300 0.3520200 0.3473000 0.3473000 -0.0074720 -0.0074720 -0.0074720 0.3955300 0.3941300 0.0228650 0.0573680 0.3764400 -0.3851500 -0.0175290 -0.0175290 0.3048900 0.3048900 0.3048900 0.3340900 -0.0154660 -0.3619300 -0.0027707 -0.3705300 0.0203430 0.0203430 -0.0074720 -0.0074720 -0.0049844 -0.0049844 -0.0130290 0.3513700 0.3513700 -0.0032399 -0.0020784 -0.3620400 -0.0047079 -0.0085766 0.3473000 0.3473000 -0.0074720 -0.0074720 0.3955300 -0.3755000 -0.3755000 0.0228650 0.0573680 -0.3758300 -0.3706500 -0.3851500 -0.0175290 0.0000000 0.3048900 0.3048900 0.3494100 0.0013868 -0.0186280 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 9.5485320 11.8331721 7.1736472 10.0076634 4.2146688 11.2150545 2.0989585 0.7770304 9.0106621 8.9779410 -0.2229696 7.4891567 2.7770514 10.0961501 9.4972866 0.7770304 9.3990944 9.7485860 8.9594369 10.9098635 9.4882878 7.2688956 10.1629049 1.1721034 7.9217005 10.3624745 5.3316300 0.3619929 10.4168353 3.1693638 13.5315646 12.7271427 7.5908236 9.9457146 7.4809461 9.8228022 6.4635424 -0.2229696 NA 8.8350341 9.2628717 9.9925754 10.8558604 4.6099322 7.1694460 7.1864332 10.0733851 6.3694996 9.7290556 NA 11.4410452 3.0249756 3.6839322 10.2045334 6.5615461 5.7428254 9.0659086 7.7826667 10.0414850 -1.2229696 14.4999834 2.2364620 10.2813649 -1.2229696 6.3316318 5.5584023 7.8591912 9.0010442 11.891909 6.015446 8.240567 12.961608 10.231856 10.683181 12.696371 12.457292 8.960678 10.374164 12.847750 10.795590 8.895984 8.922975 1.584385 6.991362 10.674132 11.176854 6.737044 8.768564 8.627229 8.080823 10.614256 7.215834 6.391752 10.541499 7.029708 2.477470 6.804948 7.033912 10.305985 10.219468 8.316201 8.272898 10.762529 6.024969 9.067061 10.801143 10.819386 9.034430 10.710733 9.033251 8.536931 9.219934 8.306473 7.890785 11.157504 5.966866 10.642389 10.123556 6.946967 14.254864 10.365289 10.525655 12.248464 11.459818 8.985277 2.864513 TCGA-A1-A0SG 61 0 NA 434 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA other specify yes 1 white not hispanic or latino 117.51.0 NA NA 2 2 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 10.9982664 6.4329744 7.5260829 11.7438895 -0.4739312 9.8714885 1.3334237 9.5806876 11.8439198 10.4325981 9.7452518 6.8434952 8.8195548 10.1138608 8.6592253 8.8902178 10.8806082 9.0940394 6.7059917 0.1110313 10.3058026 10.2042432 13.5089432 10.4586671 8.9076262 10.6498814 5.3462620 10.1726419 NA 4.0806747 8.3979886 11.2082000 11.9637729 6.3334380 13.3800750 12.9964879 10.3641053 4.8836355 -0.4739312 7.5677424 8.0058637 10.6891039 7.6398254 12.5305671 4.0806747 11.2073216 13.6535940 6.0338789 10.1137248 11.1273898 7.4568209 6.0652427 -1.4739312 12.5322629 11.0883257 NA 8.6707416 -1.4739312 4.6553690 9.3918165 9.6463211 9.6417772 10.2709171 8.2709171 10.0849823 1.1110313 11.4395337 10.0129182 7.8614734 7.2742756 11.8613340 11.3591710 14.9219520 7.7948356 11.7875906 11.0744236 9.9237579 0.8479969 3.5260813 7.9226879 8.6859545 11.8543374 NA 5.9772937 7.1914195 9.7603020 10.7125071 4.4329728 5.8570006 4.6758329 10.3743150 11.3416667 0.1110313 13.3989505 6.6502045 7.2090780 12.3708871 13.4371475 12.7021005 7.5840748 9.9916497 10.8250049 10.3444058 10.8778507 4.8298648 8.5260833 12.0300332 10.3906563 NA 10.3782226 9.5401036 -0.4739312 2.1289532 9.5752511 10.6611512 9.9184007 9.1063418 14.8806426 10.1739914 10.7579044 7.5759317 4.2265239 16.0598692 8.9502494 12.9254279 12.0739417 10.1077546 9.6903617 7.8068538 10.2408568 0.00750000 0.00750000 0.00750000 -0.00733390 -0.00733390 -0.01216200 0.00027728 -0.00553750 -0.00304750 1.23660000 1.23660000 1.22770000 0.00000000 0.00000000 -0.00926660 -0.00926660 -0.00926660 0.01167900 0.01167900 -0.00249380 0.00041593 0.00430210 0.02314500 0.02314500 0.02314500 0.00127160 0.00127160 0.00471900 0.18344000 0.00750000 0.00750000 -0.00221680 -0.00733390 -0.01216200 -0.01216200 -0.59969000 0.01070300 -0.58215000 -0.60119000 -0.01257600 0.00388540 0.00388540 -0.61355000 -0.00048943 -0.00048943 -0.00048943 -0.00048943 0.00000000 0.00000000 -0.00926660 -0.00926660 0.01167900 0.01167900 0.01167900 -0.00249380 0.00041593 0.00430210 -0.60680000 0.02314500 0.02314500 -0.00761010 0.00127160 0.00127160 0.18344000 0.01167900 -0.23178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 8.9977584 13.6980419 8.5373104 9.7710416 5.0461898 10.6897329 5.7740095 -0.4739312 8.0883255 7.3747065 -0.4739312 7.7040509 3.4329728 10.4056665 9.2308515 1.6959938 8.7121975 8.5062227 11.7288193 11.0166834 9.3592422 7.3995275 10.4227940 2.8480169 9.2377501 10.0849823 7.1110459 NA 10.9612326 2.9855186 12.7545262 12.2285806 7.2843068 10.1914192 7.8068538 9.5260833 4.0179397 -0.4739312 -1.4739312 9.3269831 9.8195548 10.0608725 9.6148714 3.5704751 8.2724968 7.9032938 10.6352609 7.1072840 9.7263689 NA 10.5667155 5.1259940 3.1699410 9.5082854 6.7562481 6.2742766 9.1269254 8.3237447 7.1481349 2.2265085 13.5549390 0.5260688 10.1721918 0.1110313 6.3074431 4.9184005 7.4117796 9.5636303 13.5403906 4.2540044 8.7146721 13.3800750 10.1949682 10.3012819 12.5305671 11.7916983 9.0864160 10.7635920 12.6294530 8.7656819 8.6859545 8.3964481 0.5260688 6.8207036 12.2750098 11.1426321 6.1259961 8.5636303 9.7887653 8.3398643 10.8752539 7.6630742 8.9627948 10.4586671 6.7257562 2.9184053 4.6346049 6.0866458 11.3562023 10.5810266 9.6154277 9.1138606 11.3296090 6.1035123 9.6417772 10.4685978 12.0044737 11.1082252 10.6443755 9.4193847 NA 9.6253390 6.3526314 7.9502497 10.7125071 7.5595063 10.3554096 10.3743150 6.9011227 13.3762701 10.2884653 10.3172462 12.5259071 11.2284724 9.3470599 0.1110313 TCGA-A1-A0SH 39 0 NA 1437 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 1 2 2 2 1 1 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.779929e-06 4.449823e-07 11.4066218 6.3250967 6.3250967 11.4341859 0.8526381 10.0799839 0.1156992 10.2813875 11.2822246 7.8321767 9.3909916 7.3917677 9.2771949 9.7986377 6.1081104 8.5873181 9.1951278 9.8367422 7.7857088 -0.4693299 9.1772391 11.0700817 13.2455163 10.5025833 9.3540477 10.4805073 5.0384757 10.9642634 NA 2.7005951 8.9663509 12.4133236 12.7499247 7.8904303 14.1349731 12.7738545 10.4603089 6.9694729 4.0852717 7.7081003 8.5264476 7.8593553 9.9653087 12.4638179 0.8526381 11.1172858 12.8931038 5.4614172 9.2136224 10.5011460 7.2721473 3.9229970 NA 13.8318859 9.2380397 5.0384757 9.1305935 0.1156992 5.4848761 9.6734259 10.6088313 9.4133235 11.2466425 10.3859384 10.3476641 2.9229970 11.4612331 9.8195467 4.9901108 8.7774210 -0.4693299 9.9068060 15.6609092 8.4172306 11.2037688 11.9528767 7.9143845 2.9901199 2.3380250 8.3396447 9.7516634 11.5377078 0.5306701 6.4254979 6.8838273 9.6411638 11.4239821 9.8783019 6.0463797 5.0384757 10.2371766 11.3504604 0.1156992 13.6959801 4.5530471 6.1888914 13.0527103 15.0426956 12.4685141 8.7081000 10.5726818 11.3863277 11.0094451 10.7634013 4.9057215 8.2955522 12.3991173 11.7542298 -0.4693299 10.4989873 8.9411318 0.1156992 3.1751094 9.9564210 10.2624239 9.9294243 9.2440669 14.9811508 10.3536496 9.9143848 6.9860081 4.2586018 15.6047802 8.6651067 12.7998803 13.2699865 9.7285115 10.0028637 8.1799369 9.9729399 -0.00412660 -0.00412660 0.49286000 0.00805670 0.88666000 -0.01354000 0.02342600 -0.01519100 -0.01519100 -0.01147300 -0.01147300 0.45632000 0.00172090 0.00172090 0.00752330 0.02132300 0.01071700 0.41714000 -0.00129040 -0.00733390 -0.00069303 0.00249690 0.00610900 0.46468000 0.46468000 0.02356600 0.02356600 0.01642500 0.02679500 -0.41234000 -0.00412660 -0.45800000 -0.46812000 0.02848100 -0.01271300 -0.01770900 -0.01770900 -0.01519100 -0.01519100 -0.47860000 0.04911400 0.04911400 -0.01147300 -0.01247500 -0.01247500 0.00861540 0.03101400 0.01307400 0.04131700 0.00752330 -0.45811000 -0.00129040 -0.00129040 -0.00129040 -0.02841100 -0.00069303 0.00249690 -0.45790000 -0.45319000 0.46468000 0.00583090 0.02356600 0.01642500 0.02679500 -0.02246900 0.07369000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 9.5668542 14.8836895 8.8627170 10.8758085 2.3380250 10.6074961 0.1156992 0.5306701 8.2483569 9.3005184 NA 9.2101606 2.1156326 10.1370858 8.8102911 2.3380250 8.8627170 9.3185830 11.6423053 10.8050587 9.8503866 7.6625374 10.5832486 4.2586018 7.1490663 10.3476641 4.6392032 NA 10.8827240 2.6181447 12.2643315 12.1596956 8.5236188 10.1839735 7.3218433 9.2449261 6.0698396 -1.4691302 -0.4693299 5.5859630 8.1380106 9.2232961 11.4586437 3.8882367 8.2817224 6.2653900 9.6618944 6.7105902 9.8771942 -1.4691302 11.0421861 4.4614172 6.9186975 9.6588295 4.8642852 4.3380321 8.6791570 7.6829651 6.7254372 -1.4691302 13.3171033 0.5306701 10.2988648 NA 7.8548609 5.2855687 8.7205052 9.2110399 12.376367 4.870532 8.944309 14.134973 10.104328 10.638878 12.463818 11.371655 8.889332 11.239980 12.842642 9.379303 9.751663 9.936886 NA 7.347664 10.592389 11.786004 6.038476 8.836742 8.650919 7.727897 10.211356 6.965309 4.834463 10.502583 8.250070 8.698099 6.425498 6.028213 13.202387 10.461418 8.287237 8.165491 11.842996 6.014496 9.413323 10.195572 10.296795 9.713695 10.701857 9.173635 -1.469130 9.611085 7.724969 5.700606 11.423982 10.476124 10.404125 10.237177 6.839020 13.762502 9.260301 9.902457 13.205149 10.634952 9.474661 2.990120 TCGA-A1-A0SI 52 0 NA 635 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 117.51.0 NA NA 3 2 NA NA 1 2 3 3 4 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 4 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 2 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.78726e-06 1.491682e-06 11.4602202 7.8536994 6.9666335 11.0166738 0.8202402 9.6932080 1.2352982 9.8065928 11.8912920 8.7371513 9.7416217 7.6468251 9.0150336 9.4374379 7.3280717 9.4956456 10.7819675 9.9598280 7.4761054 4.1895083 10.1240574 10.9740397 13.3155488 10.5532920 9.6626271 10.6417849 7.1541771 11.0897852 NA 2.4832354 8.8099076 12.3895785 12.2461045 7.4974088 12.1302266 12.5581577 10.1719521 7.6865250 4.7271690 6.8202773 8.0426690 8.5515956 8.6823974 12.3557950 -0.1796781 10.8990946 12.4394267 6.3645969 9.1935552 11.0508976 8.4263734 5.9006495 0.2353594 14.8813837 9.6276316 3.1895083 8.4867964 NA 5.1422051 10.4411073 9.8249653 8.9691770 11.2066781 10.2384807 10.2779995 2.1422174 11.5865295 10.3194582 6.7588761 9.3094557 0.5572875 10.4472025 15.4384901 8.6580097 11.0041188 10.6117109 9.3850613 2.8791764 NA 8.8518630 9.4532719 13.2679626 -0.1796781 6.0932961 7.4593160 9.8463390 11.5025398 6.7150944 7.3307108 5.9767806 9.2858431 11.6307144 2.6276302 13.5901489 5.9495606 6.8240282 12.3323587 14.2413553 12.8660932 8.3951854 10.4956457 10.6332561 10.1051278 11.4071164 5.2797090 8.3581422 12.1618881 10.1210105 1.2352982 10.3310409 8.7937350 1.9357615 3.2353135 9.6730663 10.7418697 9.6772209 9.3412226 15.2179401 9.7855800 9.4820547 8.0870634 2.5572385 14.8473907 10.0466889 13.1314100 12.3768625 10.3523079 10.0905720 8.5527267 11.0039513 -0.00041585 0.82451000 0.82451000 -0.00166290 0.61770000 -0.32461000 0.00416320 -0.00021622 0.00305220 -0.42855000 0.00069327 0.00069327 0.00221930 0.00221930 0.12712000 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.32554000 0.00263570 -0.32762000 -0.47184000 -0.47184000 -0.01945200 -0.02926800 -0.02926800 -0.02767100 0.42217000 -0.00041585 -0.00041585 0.00000000 -0.00166290 -0.32461000 -0.32461000 0.00416320 0.00416320 -0.00563000 -0.00021622 0.00305220 0.13184000 0.13184000 -0.14361000 0.00388540 0.00388540 0.00388540 0.00388540 0.00221930 0.00221930 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.00221680 -0.33516000 0.00263570 -0.32762000 -0.32913000 -0.47184000 -0.47184000 -0.35860000 -0.02926800 -0.02767100 0.42217000 0.43395000 -0.00769980 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 9.2097287 14.4929230 7.1807575 10.4982899 3.2797090 11.1902374 0.2353594 -0.1796781 8.6404557 8.0808042 NA 7.6852261 5.2125927 10.4374380 9.1391960 3.3227790 9.3221138 9.8089613 9.1194846 10.2521224 9.2653605 7.6276316 10.9174309 2.5572385 9.1734235 10.2779995 2.7588788 -0.7646406 10.4629301 1.5572385 12.3460421 12.5778056 8.6372603 9.9086232 9.6409874 9.1924161 5.8127421 0.8202402 -0.7646406 8.0506976 8.5628667 9.5773888 11.8310378 4.0682065 8.9668284 7.1056791 9.3684563 6.6906420 9.8921859 NA 12.0563905 4.0166746 3.8500193 9.5207395 6.8600726 5.8127421 9.6484131 8.2673598 7.7371513 2.9357615 13.1649887 0.8202402 10.3408954 NA 7.2769730 5.0682022 7.9512760 8.1792941 10.593067 7.276973 7.932281 12.130227 9.712567 11.359920 12.355795 10.778829 9.357495 10.207217 13.519488 8.710034 9.453272 9.101048 -1.764641 7.575164 11.697177 11.586529 7.694746 8.976781 9.005152 8.673472 10.417693 7.504441 5.963234 10.553292 9.691669 4.661579 4.879172 8.055078 10.963872 10.686010 7.831504 9.716609 11.005772 6.816515 8.969177 10.358142 10.647355 10.237074 10.923346 9.409616 NA 9.797127 7.521410 6.935754 11.502540 9.094072 10.474614 9.285843 7.866491 12.876576 10.218308 10.584042 12.395973 11.186599 9.370382 2.879176 TCGA-A1-A0SJ 39 0 NA 416 breast stage iiia t3 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 72.63.0 3 2 1 3 2 2 3 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 8.343418e-08 12.390781 8.769497 8.540641 11.467423 4.382010 9.463504 NA 10.074150 11.923071 6.729028 9.190267 6.733994 8.902265 10.867097 7.964861 8.086337 9.619240 11.101307 7.280438 3.549115 9.609139 9.400868 15.884343 11.513279 9.100827 11.040721 4.277040 10.235619 -0.450873 1.356482 9.218890 11.931202 12.442041 7.843740 13.185177 12.850258 10.052448 5.797047 3.356468 6.806507 8.351635 8.705202 7.482810 12.638569 NA 9.561045 13.330581 2.008559 9.213086 10.583918 8.806506 4.797044 1.549127 13.977063 10.139238 -1.450873 8.278739 3.834519 4.503317 10.055922 10.449986 7.554743 12.339773 10.478007 9.562441 1.719052 11.089731 10.271926 6.520663 7.277039 NA 10.177564 14.762906 7.542057 10.731203 11.963540 10.036959 0.549127 5.040971 7.657643 9.606434 11.484468 -1.450873 6.134081 7.479856 10.103228 10.948397 5.103707 5.056913 4.503317 10.851758 11.980877 2.941444 13.877303 6.032934 8.425636 13.289268 13.690667 12.826842 8.366102 10.395784 11.060377 10.499463 11.376064 4.698869 7.473931 12.001231 12.528633 2.549127 10.583574 9.137833 1.134089 1.356482 9.111361 10.087793 10.493099 10.034445 15.371117 10.428702 10.661558 5.221545 4.758570 15.805484 6.214455 12.105625 12.324935 9.651094 9.378049 8.194777 10.425923 -0.021784 0.414120 0.891660 -0.015741 -0.028559 0.389820 0.410270 -0.067467 0.277100 0.443420 0.443420 1.052700 0.456830 -0.505570 -0.043737 0.887060 3.656900 1.370400 3.656900 0.289290 0.052383 -0.063166 -0.540580 0.307610 0.422840 -0.440910 0.410470 0.416640 2.128200 -0.021784 -0.021784 -0.057654 -0.015741 0.404270 0.389820 0.410270 0.400770 -0.134450 0.277100 0.277100 0.422840 -0.050641 0.443420 -0.531000 -0.511770 -0.508050 -0.499550 -0.505290 0.453770 -0.043737 -0.529670 1.318700 -0.501420 -0.503600 -0.199620 0.052383 -0.052531 0.435810 -1.292900 -0.411570 0.425190 -0.440910 0.416640 0.384360 0.440200 -0.504740 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.449 0.449 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.449 0.449 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 8.3006628 12.7651824 5.8710477 9.2417341 3.7190410 10.4424202 -0.4508730 1.3564819 8.3255519 8.4210238 NA 9.1008268 4.4317633 10.5918040 8.8112135 4.2215446 9.6292699 9.8379847 8.5206623 10.6172252 9.8712721 7.5004037 11.2538869 -0.7025151 9.7773362 9.5624414 3.9066694 NA 10.9449206 3.5491147 12.2025236 12.5869230 8.0044458 11.1073002 7.7165369 9.7573530 5.1037074 1.3564819 -1.4508730 1.3564819 8.4605108 9.6596019 9.8011928 6.2564786 7.2271557 7.5292580 10.1222925 6.6784015 9.7438756 1.5491270 10.0974590 2.8710551 4.5714887 10.0202706 6.6730334 6.8845088 8.6339270 8.4039873 8.1056247 -0.4508730 13.3178716 0.5491270 11.2695767 NA 8.3106700 5.0882773 8.4393829 9.1592207 14.611202 6.532113 9.053938 13.185177 10.073283 11.000587 12.638569 12.068263 11.117350 11.581853 13.133905 10.613525 9.606434 8.941436 2.941444 7.563139 13.765258 10.619240 5.906672 8.726538 8.400868 8.240862 9.852420 5.657643 7.506221 11.513279 7.115173 3.503311 7.185744 8.268627 11.977086 9.597605 8.895633 9.293953 13.036770 5.604401 7.554743 9.965388 11.827278 9.979048 10.261646 9.223311 -0.450873 8.406991 7.228247 7.004446 10.948397 5.491632 9.794671 10.851758 6.975384 13.396029 10.376858 10.081962 12.391076 9.816491 8.791102 4.103707 TCGA-A1-A0SK 54 1 967 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA other specify yes 0 asian not hispanic or latino 72.63.0 4 3 4 1 1 3 2 2 1 1 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.918986e-06 8.343418e-07 11.48008463 0.33411057 8.34677698 11.54086165 -1.66566056 10.41463693 -0.08085064 9.64930199 12.16901852 6.30569516 10.30784982 9.14632988 9.85575289 9.31785869 6.86553409 6.94886245 10.36033003 10.71353086 9.27886455 1.14149819 10.59947448 10.37341429 11.46504474 12.78065428 11.00724064 10.93383293 1.91911122 10.87524912 3.79358380 -0.08085064 9.91346839 9.86504640 13.32137207 7.00303773 8.24554463 11.33854854 9.27593382 5.19213497 2.85772228 8.01187185 8.33837316 8.71677660 8.76565010 10.97304087 2.03460311 8.75621737 2.24104694 9.71623609 9.79476188 11.59360154 6.92660911 4.54360724 2.24104694 12.49563161 5.81796854 1.14149819 8.88201112 4.28835118 6.06886210 10.26193048 12.54391044 9.02240277 9.04323622 9.88970031 8.97258841 2.72646069 11.25357452 10.58977126 6.54360569 3.37855324 9.05610606 12.85385015 13.79860251 8.12510346 11.63992924 11.28598357 10.03978489 2.58207422 4.97800796 8.51902799 8.56297122 10.23690442 0.91914936 5.61027780 6.41630099 13.34747515 10.07139988 4.90400713 2.50408643 4.35651712 6.47370413 13.22915965 -1.66566056 13.11679243 4.56296893 8.15273457 10.89949258 11.22669528 13.20413180 6.21679629 10.36654265 11.83511881 11.80882175 11.92345251 5.37854630 9.00303745 11.56507356 8.13989613 NA 9.65720732 11.05396911 0.33411057 7.60196908 9.77761401 12.59323368 11.48135743 8.41363724 14.16276006 10.42954954 10.39180584 6.99948820 4.33415348 10.96623888 8.21373561 11.30425839 9.88393707 11.10357711 9.69938141 7.85378861 10.15978709 -0.48838000 0.29079000 -0.28644000 -0.77419000 -0.06839400 -0.30898000 0.16925000 0.18736000 0.10661000 2.91530000 2.12240000 1.65780000 -0.23693000 0.04159100 0.10565000 0.11637000 0.11637000 2.98260000 0.06941200 0.93527000 -0.33272000 0.06207100 -0.27363000 -0.27363000 -0.27866000 0.18206000 0.18206000 0.18206000 0.19237000 0.01320400 -0.46654000 -0.82122000 -0.76536000 -0.30898000 -0.93490000 -0.80402000 -0.80402000 -0.28811000 0.11784000 0.14711000 -0.29958000 0.00000000 -1.25560000 0.14142000 0.14142000 0.14142000 0.15815000 0.00054581 -0.44664000 0.10565000 0.17090000 2.98260000 0.06941200 0.65718000 -1.29290000 -0.33272000 -0.77889000 -0.75720000 -0.26469000 -0.27363000 0.15455000 -0.81170000 0.18206000 -0.81516000 0.09855100 -0.82091000 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 -0.496 1.658 0.141 0.141 -0.125 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 -0.496 1.658 0.141 0.141 -0.125 5.83399819 12.18140561 5.99948820 9.43152623 4.52397589 12.01484166 0.65608444 0.33411057 9.07308917 6.61492329 6.61955534 9.38468145 5.92660911 11.09819471 9.85231383 6.87718473 5.27666787 11.08548733 7.41630184 7.90400834 8.98561684 8.76565010 11.17000552 -0.08085064 8.97168293 8.97258841 4.08904046 -1.66566056 10.07013155 4.03459430 13.20186559 12.02567791 8.26784335 10.28069330 7.33133171 10.54451939 8.37854674 5.06207421 -0.66588943 8.50658013 9.05610606 8.43875111 6.20451637 8.99325657 9.83670084 7.33977698 10.77502164 5.41096855 9.18979961 -0.66588943 11.60751101 5.54360724 4.58208024 9.69752069 5.58075151 3.61955387 7.69170444 6.22897065 5.17964242 0.91914936 14.19858047 -0.66588943 10.24479515 -1.66566056 10.62992138 7.04839750 8.97168293 8.15273457 8.125364 9.108116 8.210669 8.245545 11.077725 10.053969 10.973041 12.259985 10.057779 13.038705 12.341618 12.317948 8.562971 8.312863 8.803794 8.004809 8.895440 11.5468009 7.3056961 8.4826289 11.3687795 10.1281622 11.5921045 2.5040864 9.7498942 12.7806543 9.7551653 0.9191494 10.2645202 9.7708900 11.3504385 10.5242858 9.1725685 11.0930003 7.6560809 4.3565171 9.0224028 9.9529967 12.3410045 12.6739329 11.2914360 9.9345301 NA 9.5762428 6.3785463 6.1479335 10.0713999 8.1575197 11.9187627 6.4737041 7.7499157 14.5173032 10.3217718 10.6518477 11.7375640 10.8889811 9.7183966 0.6560844 TCGA-A1-A0SM 77 0 NA 242 breast stage iia t2 n0 (i-) m0 2-10-2014 male 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 1 3 1 4 NA NA 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.668684e-07 10.91880489 3.29063083 5.62182917 10.89604376 -0.66360234 10.28661898 -1.66337383 9.99865093 11.07029037 8.03513230 10.11121472 7.75428024 8.60905755 9.82376528 7.66285704 8.64817600 9.64362841 10.19518578 7.30221211 NA 9.31513801 10.49440611 12.50916769 11.74183507 8.85508088 10.24256666 3.46571332 10.62644078 -0.07856367 NA 8.27306544 12.03306924 12.81948765 8.22669203 17.49367343 12.81222440 10.27674126 5.98028355 3.09131055 7.42653985 8.39847394 8.54344214 8.63678012 13.50807360 -1.66337383 11.92724859 13.41466188 6.13732727 10.39303827 10.50384581 8.33642756 3.65836003 -1.66337383 14.45551935 11.55574748 1.79585005 7.53855136 NA 3.42388738 8.84025330 10.81620793 10.44429860 10.12024449 9.86488178 10.16773488 6.35323683 10.83028314 9.88813591 4.24331872 7.41591243 1.33645479 9.59617093 15.18983470 8.17383501 11.24519555 10.54252630 8.37534662 2.14378522 2.50634805 9.74475733 8.88909688 10.87897595 0.65837146 7.46828435 7.42918493 10.17405556 11.44707408 8.70711510 5.35879711 4.19441017 10.77183747 11.42372475 4.54588190 13.92153692 5.50635122 7.39441896 12.47077376 14.19367975 12.55778822 8.76059388 10.74475741 11.28880489 10.59905692 10.06944292 4.05533450 8.05581657 12.17474524 12.92654683 0.33639766 10.32901200 8.84818036 1.33645479 1.33645479 9.63047391 10.08587819 9.99419275 9.02991470 15.52587583 10.71607675 9.53793899 7.38082207 1.79585005 16.61437792 10.34800441 12.95452635 13.65118790 9.58435524 9.98073467 8.52995288 11.26158335 0.4927600 2.3188000 1.0779000 -0.0028453 -0.0028453 0.0075641 0.0120180 -0.0089271 -0.0089271 0.0202670 0.0202670 0.0281240 -0.0060267 -0.0060267 0.5744200 2.4511000 3.6569000 0.0070076 0.0048230 -0.0052189 0.0033938 0.0095298 -0.0101690 3.6569000 1.0355000 -0.0162280 -0.0162280 -0.0162280 0.1003700 -0.5945400 0.4927600 -0.0137520 -0.0028453 0.0075641 0.0075641 0.0120180 0.0000000 -0.0089271 -0.0089271 0.0035327 0.0146740 0.0146740 0.0202670 0.0360120 0.0360120 -0.5562900 -0.5462800 -0.0060267 -0.0060267 0.0159310 -0.5840700 0.0070076 0.0048230 0.0048230 -0.0052189 0.0033938 0.0313600 -0.5727400 -0.0014605 -0.5837800 -0.0013220 -0.0162280 -0.0162280 0.1003700 -0.0074084 0.0164900 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 9.02205261 13.92812531 7.03686704 10.07831589 1.78927019 10.74555341 1.33645479 NA 8.27306544 9.59969679 -0.07856367 8.48108578 4.98028584 10.56824886 9.27600689 2.14378522 6.34765503 9.80606945 12.16822972 11.34240302 8.93193682 6.92138991 10.81342697 4.35879711 8.62644644 10.16773488 -0.07856367 NA 10.71715931 3.69397753 11.76740283 11.78402754 8.14699932 10.32936604 8.28771238 9.35740751 7.57244179 -0.66360234 -1.66337383 5.58435524 8.65157735 10.04076369 10.38729662 2.79585005 8.21751089 6.47085407 10.24819408 6.66285776 10.29715369 NA 10.42786310 4.09131901 5.26716496 9.47749378 6.44086917 2.14378522 8.78660780 6.97667295 8.55438548 4.06434829 13.66461170 0.92136016 9.85458901 NA 8.35740773 5.05067147 8.45925578 9.17089874 15.3876375 6.7373068 8.0455112 17.4936734 9.8362735 10.8599897 13.5080736 11.7267310 11.7565682 10.3429150 14.5481449 8.8121609 8.8890969 10.3560184 0.3363977 7.6171986 12.1648617 10.8119078 7.1502093 9.3889956 8.6264464 7.3998231 9.1283151 7.4159124 4.7114674 11.7418351 6.7710563 3.1437852 8.0745199 6.4153784 11.7256557 9.7141804 7.9138564 9.1685265 11.5099487 4.2906235 10.4442986 9.9293518 10.9400540 9.7674029 9.6862617 8.5113534 NA 9.1941210 7.1971420 4.5458819 11.4470741 9.2523071 9.9363405 10.7718375 6.8794595 14.2399801 9.4624867 9.5932260 12.0979789 11.1322644 8.6367801 0.3363977 TCGA-A1-A0SN 50 0 NA 1196 breast stage iia t1c n1 mx 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 117.51.0 NA NA 1 3 NA NA 1 2 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.17947e-06 3.469029e-07 11.1252867 5.3928017 6.0247142 11.4470077 0.3594087 9.9887357 NA 10.6421779 11.8470935 7.7581226 9.7840703 7.4835006 8.2827067 9.9759279 6.7036752 9.1225915 10.2374300 10.1358121 6.9518360 2.0598052 9.0821866 9.9754684 13.4663100 11.3493057 9.0787678 10.8637016 7.1142671 10.3761874 NA 4.5492009 8.6273362 10.8970828 11.6175034 7.2080021 17.2223191 13.7468916 9.0983159 6.6813073 3.4037722 6.9518360 8.5343048 9.6132266 8.0388592 12.9639902 1.1667154 9.8264751 13.2356562 2.5292962 9.3074324 10.6821522 8.6958856 6.1209304 1.1667154 14.4875617 10.0162507 3.6813031 8.3193808 -1.6407037 4.9887347 10.6473800 11.2854897 9.6273362 10.9306577 9.3614909 9.7119742 0.3594087 11.0830400 10.5730908 5.3928017 8.6296743 -0.6407037 10.0847453 14.7848573 9.5996219 11.9293533 11.0436894 8.6880541 1.5293212 5.6073066 8.2496435 9.0658752 11.7406516 -0.6407037 6.6120443 6.9292347 9.6773569 10.8763102 5.7772303 7.0282641 5.6447821 10.3269656 12.0412763 3.4886564 14.0358871 4.7169306 6.9814314 11.8496032 13.0388592 12.4067586 7.9120480 10.1934550 11.0108793 10.1459958 11.0864486 4.1142671 8.8330849 11.6230884 9.3373744 -0.6407037 9.7246080 8.9072377 0.6813143 2.6284237 9.4593843 10.9478595 9.5510553 8.7698306 15.0799841 9.6643008 9.4931636 7.6470914 2.3593806 15.2159748 9.3824403 12.4914771 11.8309273 9.7533057 9.3258844 8.1651231 11.2639535 -0.3778800 0.6721500 0.6658600 0.0055529 0.0055529 -0.3738100 0.6886800 0.0018030 -0.3707600 -0.2396400 -0.2396400 0.6428600 -0.3686100 -0.2845300 0.0252500 1.0587000 0.3312400 0.3278500 0.3278500 -0.3721100 0.4163000 0.1698600 0.1622000 3.6569000 3.6569000 -0.0523960 -0.0523960 -0.0523960 3.6569000 -0.3778800 -0.3708700 -0.3276200 0.0055529 -0.3738100 -0.3662400 0.6832800 0.6832800 -0.0056757 -0.3707600 -0.3787600 0.2579300 -0.4109100 -0.2396400 -0.0114730 0.0266540 0.0266540 0.0406090 -0.2845300 -0.2845300 0.0252500 -0.3721100 0.3278500 0.3278500 0.3278500 -0.3763900 -0.0109480 0.1146200 -0.2378900 -0.4077900 -0.3887300 0.0000000 -0.0523960 -0.0523960 0.2826300 -0.3825700 -0.3863700 -0.220 -0.136 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 -0.220 -0.136 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 9.5995741 13.6490018 5.4989306 10.0344540 3.0363275 11.1739615 1.8188097 NA 8.9996241 8.2404932 -1.6407037 7.8791531 3.5688347 10.0287071 9.5405312 0.3594087 8.7484726 9.9048262 10.1333425 9.6545741 9.5019777 7.4835006 10.5364872 2.8829364 8.2989584 9.7119742 1.5293212 NA 10.1950348 1.1667154 11.9960037 12.4623390 8.3062855 9.5430144 7.6378283 9.4037732 5.2901147 1.3593525 -0.6407037 8.2158048 8.6214739 9.9923743 10.6276286 3.2173548 6.8072892 7.4989306 10.2613773 7.0838931 9.2343605 NA 11.2657060 3.6073066 3.1667315 9.7395317 5.4196434 2.7516994 9.0344540 8.6711274 9.2812200 0.6813143 14.1208784 1.3593525 10.6413091 NA 7.7213228 4.5881989 7.9574318 8.9320792 14.457576 6.974089 7.951836 17.222319 9.640150 11.420581 12.963990 12.585716 9.411098 11.189102 13.304960 10.178361 9.065875 8.702565 7.260246 10.724334 12.327326 11.317569 5.890760 8.453457 9.131694 8.847219 11.006408 7.676791 10.369557 11.349306 7.107572 3.166732 7.097472 7.781339 11.009084 10.408887 8.958362 9.573698 12.036879 5.951837 9.627336 10.414661 10.689456 10.329485 10.952303 9.340233 6.147282 9.375296 9.107597 4.751694 10.876310 8.282707 10.486838 10.326966 7.546731 13.537266 10.026934 10.043689 12.012672 10.938223 9.273764 1.166715 TCGA-A1-A0SO 67 0 NA 852 breast stage iib t2 n1 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3731028 3.3223753 8.4325903 11.5880184 -1.8868329 9.6207130 NA 10.1508084 11.6995236 3.6364854 9.7989811 7.3150418 7.0844619 8.5402311 8.7684490 8.2122663 7.2266607 10.1262410 9.3417370 3.7276264 8.9442257 9.9250957 12.0328989 11.0328989 10.9432355 10.9366836 3.4348417 11.0810343 NA 0.4348817 5.9458090 11.1040859 12.5957893 8.4549930 13.2111972 13.1863905 6.4966221 7.6713394 4.6978794 9.0280508 8.3761875 14.4171092 6.7888749 11.6653473 NA 8.4471915 5.1129169 6.4393472 8.9173560 10.7884343 9.9093636 4.0198086 0.4348817 12.8846239 9.4052400 4.5558591 8.0122753 NA 4.1790094 10.5702992 11.3255667 9.5754207 9.4671678 10.3513231 9.6708607 NA 8.8228636 9.4376614 3.5391836 6.2003808 -0.3020483 8.3971642 13.8727545 7.9415148 11.2767252 11.8644624 10.9538929 1.4348284 -1.8868329 9.2671036 10.1545775 11.0996492 -1.8868329 3.3608418 6.7639705 10.9103773 10.2749949 2.5052304 4.3797041 3.1129169 7.5328787 12.0369885 1.2828549 13.9239417 5.0554343 7.4836054 8.7585767 11.7617253 13.0782066 3.0671224 11.6789724 10.6825366 10.8928325 11.1174899 5.1682008 7.6751610 11.8402007 8.0122753 9.4263683 10.0425467 10.6025154 0.1129003 3.1178612 10.3329943 11.9976612 10.2598052 8.9458084 14.5532684 10.3931091 10.1366727 5.8744699 0.1129003 12.0619243 3.2003788 12.7208265 10.0587279 10.9564469 10.8701000 8.7303859 10.9720746 -0.106970 0.905120 0.391810 1.736500 0.534670 0.216370 0.112130 1.309500 0.607190 -0.527290 0.766570 -0.734330 1.267300 -0.676740 0.671780 -0.133160 2.454900 2.135000 -0.588720 1.250400 0.767340 0.072827 -0.544720 0.168500 0.744110 -0.491830 -0.491830 1.060100 0.132880 -0.538850 -0.106970 -0.541290 -0.580380 -1.059200 -1.015100 -0.820970 -0.747860 1.619300 1.045800 -1.279700 -0.946930 -1.292900 -1.292900 -0.813510 -0.990250 -0.753000 -0.616910 -0.676740 0.302820 -1.102100 -0.593510 0.230090 0.265610 0.173640 -0.459610 -0.647470 -0.671870 -0.650520 -0.610660 0.168500 -1.070300 0.097688 -0.438860 -0.588920 0.117850 -0.157330 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.708 -0.708 -0.753 -0.753 0.157 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.708 -0.708 -0.753 -0.753 0.157 7.1654859 12.0295443 3.8408358 9.1990547 1.2222481 13.4395936 -0.3020483 NA 8.5987478 3.9708997 6.0729204 7.6761334 3.1573186 10.8796542 8.9763304 8.2017064 7.6978808 11.2000497 9.3363166 9.6389284 8.5421265 9.1837101 9.2434889 0.1129003 8.4460738 9.6708607 -0.3020483 NA 10.7853437 2.6978850 11.5171286 12.7581264 7.8237245 9.8020428 9.5615509 10.8823429 4.9708997 -1.8868329 -0.8870997 0.1129003 9.2363931 7.6345185 8.5212483 8.8271639 8.5407968 5.9266992 10.2534286 5.7202484 10.5942133 2.8677976 9.6379496 1.4348284 6.4166996 9.1952937 6.4076315 5.6978822 6.6403953 6.4121261 6.3272382 -0.3020483 12.4763002 -0.8870997 10.6273859 NA 11.6230644 2.9708905 7.9505460 9.7002271 7.013785 8.173614 9.095912 13.211197 9.992502 11.152694 11.665347 7.072920 10.557121 12.494529 12.404521 11.737257 10.154578 8.491213 5.636480 8.494461 11.316266 11.293138 6.466066 8.625659 10.300889 10.395138 10.529133 4.242199 2.505230 11.032899 9.997089 3.157319 9.622198 8.749090 13.120384 9.626152 9.244775 7.640395 8.798543 4.867808 9.575421 9.704908 9.862788 9.192403 10.812708 8.733138 NA 9.199247 8.270265 6.095912 10.274995 7.310135 10.201707 7.532879 8.233234 13.366360 9.832307 10.067115 12.296088 11.815740 9.547547 1.813361 TCGA-A1-A0SP 40 0 NA 584 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 NA not hispanic or latino 72.63.0 4 4 4 1 NA NA 2 5 1 6 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 4 6.396621e-07 1.946798e-07 12.6835695 5.3907880 8.2352958 11.2291695 -0.4546246 9.4929345 NA 9.1246135 12.0691046 8.2405261 9.3026876 7.9610393 8.4686253 9.3805587 7.4370812 9.2876071 10.3919634 11.4936649 8.2543815 6.8895940 9.9138042 11.5910573 13.6827692 12.2081885 9.6758683 10.4980389 5.7644656 10.7872779 7.2934910 -0.4546246 9.2309225 11.6315998 13.2207034 9.0912275 11.6043040 12.3796700 9.9333149 8.3364606 4.7547486 5.8581800 8.0169732 9.0016520 9.8138397 9.7045383 -0.8224011 9.8295434 7.8214220 8.3299326 9.4231109 10.7048537 6.8895940 4.1302637 1.5452765 12.7069256 10.5473849 0.5452765 8.6194391 0.1302720 5.4878111 8.4892776 12.3295235 8.5424771 8.9257589 10.0021654 10.9812283 2.6327568 10.6350791 10.4052206 5.2035105 6.8895940 2.9376080 11.9170743 15.5320730 8.6862936 11.0243200 10.5143244 11.7400545 2.0047171 2.4522000 9.2194899 9.0757040 10.0950823 -1.4548224 4.9715619 6.8167610 11.7631040 8.6577372 5.4760349 6.5053003 6.4581868 8.5254374 12.0229295 0.1302720 14.5381696 3.8672244 7.1819225 11.7360483 11.8090070 12.5774295 6.9203374 10.2812767 11.2907619 10.9668366 11.3612813 4.1891525 9.0668981 11.9689389 8.8694782 0.1302720 10.0461396 10.3327922 2.6327568 5.5110821 10.1461398 8.5197121 9.9472437 9.5903747 15.2736434 10.8790121 9.7233399 7.3461972 2.0047171 11.9133948 7.8190933 12.5223092 11.4357520 9.9573382 9.9322379 7.6113871 9.9405801 0.2566800 0.2566800 0.2700100 -0.4503400 0.1447400 0.0043021 0.9160200 -0.1086700 0.6211500 -0.1214800 -0.5684300 1.1046000 -0.4507200 -0.4507200 0.0913000 0.0413020 1.5588000 3.3206000 -0.1725900 -0.4167600 -0.4415100 -0.3776300 -0.3925200 -0.3925200 -0.3925200 0.0854090 0.0886920 0.0840650 0.2632600 0.2566800 0.2566800 0.0020805 0.9542700 0.0066653 -0.0067813 -0.4462000 -0.4618700 -0.1195800 0.6211500 0.6601400 0.2498100 0.0905750 -0.6541700 0.0950590 0.0786370 0.0786370 -0.0376130 -0.4507200 -0.5218600 -0.0024938 -0.4435700 3.6569000 -0.1725900 -0.1591600 -0.3958600 -0.3586300 -0.4350800 0.1551800 -0.3925200 -0.3925200 0.1545700 0.0897060 0.0840650 0.2569900 0.0133530 0.1265300 -0.451 -0.451 0.000 0.000 2.622 2.463 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.457 -0.121 0.500 0.000 0.000 -0.121 0.378 0.000 0.000 0.000 -0.451 -0.451 0.000 0.000 2.622 2.463 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.457 -0.121 0.500 0.000 0.000 -0.121 0.378 0.000 0.000 0.000 7.9715625 12.9165979 4.4521869 9.4125764 2.7152125 10.8843126 2.2457390 2.6327568 9.5247229 7.3364601 6.0766788 8.7789172 6.4936649 11.2095227 9.3486215 2.6327568 7.3558691 10.5978657 7.2106334 8.7967801 9.4636989 6.8167610 10.9562789 1.3526455 9.3876480 10.9812283 1.5452765 NA 10.1438154 8.2052938 12.7876531 12.8357486 8.0629668 10.1475326 8.2732179 10.5509222 2.2457390 3.9715619 0.1302720 1.1302720 8.9705135 9.8677892 7.7076891 7.9333147 6.3718463 6.5282916 10.2230173 3.9028454 10.1269690 -1.4548224 11.5332722 3.0047351 3.5453012 10.2888699 7.9486721 6.6642382 8.5648884 8.3051858 8.8433602 3.5896916 13.9760116 -0.4546246 11.2372593 NA 9.9338532 4.2457390 7.9440414 6.6221133 14.635038 8.884034 7.975750 11.604304 9.307680 11.006521 9.704538 10.637064 9.439790 12.503941 13.188083 12.260831 9.075704 8.262974 6.160007 7.424881 10.416818 10.952300 5.115154 8.855910 9.389219 9.518277 10.487028 6.867226 8.426412 12.208189 11.532029 5.839919 7.697583 9.609225 13.676069 10.705799 8.172832 10.288449 8.412577 7.203510 8.542477 9.891257 12.233876 11.837332 10.693774 9.165518 NA 9.014227 6.145211 7.905047 8.657737 6.812084 10.604980 8.525437 7.759617 14.937481 11.139856 10.596847 11.972741 12.708318 9.320085 3.189160 TCGA-A1-A0SQ 45 0 NA 554 breast stage iib t2 n1 mx 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 117.51.0 NA NA 1 2 NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.668684e-07 12.1235814 6.8702969 7.9287919 11.9010586 0.2753647 10.1503311 0.6903724 9.9571737 11.8447307 5.9287919 9.4610511 7.9548297 8.1661209 10.5045692 8.4352210 9.0145679 10.9679652 9.7463475 6.9524815 1.4977401 9.5699704 8.0523311 14.9173450 11.7346106 8.7127550 10.9930262 4.3050950 10.6507513 0.6903724 -1.3097170 8.5912542 11.8989264 12.9986281 5.6092497 12.4473604 13.8164867 7.8578056 5.8802129 3.2139538 4.5730291 8.0168166 8.2564413 5.8802129 13.7532344 -0.3095382 9.1971906 14.4094016 3.1498121 9.4153017 10.7598370 4.5972749 4.7127553 NA 13.0656643 8.9987264 2.4977401 8.5232773 -1.3097170 5.5232765 10.0827046 9.4937112 9.7340980 9.8203141 9.9699979 9.8190261 0.6903724 11.7395551 10.2668716 7.3733820 8.1661209 5.4046341 9.7811613 14.4539627 8.2837598 10.7804997 11.1579928 6.9383152 0.2753647 -1.3097170 7.2903000 9.2564413 10.7595012 NA 3.7347855 7.8248137 10.0027029 11.2607173 8.2021400 5.7127553 3.4452765 10.1877402 11.5539928 3.4452765 13.5889414 5.4183080 8.0032700 12.8509678 8.8080304 12.4321702 6.4046324 9.9028837 10.5622924 10.3572637 11.4813466 4.9383140 7.9406859 11.6135290 13.6929386 NA 9.7611790 9.0369011 1.4977401 2.3388522 9.5397924 9.1018982 9.0762496 8.6917955 15.6404532 10.6318017 9.7824836 6.9287919 2.5972690 16.8530441 5.3628135 11.0114697 11.3382953 9.7340980 8.9964489 8.4766567 11.1178860 -0.0265770 0.6535100 0.6535100 0.0000000 0.0077783 0.0188030 0.0127950 0.0029133 0.0029133 0.0091705 0.0091705 0.0091705 -0.0134950 -0.0067813 -0.0108400 3.6569000 3.6569000 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0263040 -0.7347700 -0.0592690 -0.0592690 -0.1243400 -0.0313590 1.2761000 3.3004000 -0.0265770 -0.0265770 0.0030522 0.0000000 0.0188030 0.0188030 0.0127950 0.0127950 0.0029133 0.0029133 0.0102850 0.0098669 0.0098669 0.0091705 -0.0088526 -0.0088526 -0.0088526 -0.0088526 -0.0067813 -0.0067813 -0.0806600 -0.7074700 -0.0066432 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0263040 -0.0306770 -0.7347700 -0.0592690 0.0043021 -0.1243400 -0.7444700 -0.0123000 0.0300290 -0.0671900 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9501307 10.5335231 3.1498121 8.2353518 2.4302317 11.4508993 -1.3097170 NA 8.6077594 6.4250967 -0.3095382 6.6885832 0.6903724 10.1912291 9.5537992 3.1498121 8.0145679 10.5394013 12.1086352 10.7615143 9.9637865 9.8086795 11.3183770 4.0479397 10.1847428 9.8190261 3.7347855 NA 10.6471264 2.3908327 12.2783991 12.3373959 8.8502584 10.6594140 7.0912672 11.5091691 1.6903724 2.7778510 -0.3095382 0.2753647 8.8363193 10.1197940 11.4473605 4.7127553 6.2545374 6.5358772 9.6240779 5.9941679 9.7415963 -1.3097170 9.3521653 2.8603073 9.5097681 9.8524134 6.7918896 3.2139538 8.2334188 7.9167997 9.7409161 NA 13.3385201 1.4977401 11.1462282 NA 4.8603123 6.0997791 7.6416717 7.7155269 16.370755 4.994168 8.241134 12.447360 9.535877 10.198182 13.753234 12.595022 13.023371 10.712408 12.874178 9.965348 9.256441 8.870296 1.012283 7.615200 13.110545 10.9524821 6.3414397 8.7949860 8.8876039 9.0585227 9.8011837 5.9095547 10.1045438 11.7346106 7.1082401 0.2753647 4.5730291 7.9286966 12.9799019 9.4343801 9.2198178 9.7551299 11.1731952 4.3628135 9.7340980 9.9400933 10.7193293 9.4635264 10.7517584 8.8802116 NA 9.0986956 6.8446480 5.6445831 11.2607173 5.6676679 10.9855650 10.1877402 7.4519389 12.8432266 10.4381606 9.7009153 13.4257317 10.0352379 9.2149289 1.2753647 TCGA-A2-A04N 66 0 NA 3188 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma no 0 white hispanic or latino 85.58.0 5 2 2 NA 3 2 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.668684e-07 10.6748162 5.2034479 7.6699126 11.3300681 0.2492633 10.4440074 -1.3356992 9.5920660 11.6181208 8.4716431 9.8083089 8.0130161 8.4828705 9.3690564 7.9929633 9.1460875 10.2812963 9.4692258 7.2863397 0.9862289 10.7188924 10.0338855 12.7566323 10.5723053 9.2388817 10.3139934 4.9496890 10.3573394 -1.3356992 4.9122139 8.1154994 10.7983935 12.7788438 7.0736789 12.5585374 13.1584561 10.1093030 6.5160372 2.4716557 6.9543068 8.5861290 8.5113455 8.1257673 13.4439049 2.8342056 10.9240314 13.5802608 6.7987141 10.2778336 11.4896444 7.2936445 4.0905571 -1.3356992 13.4934320 9.6970226 3.6184853 8.8127645 0.2492633 3.6642894 9.4099624 10.0683653 9.9640685 12.3135443 9.9068669 9.7993561 2.1237324 11.2143134 9.8222665 6.6415677 7.7909929 4.5711792 12.3513356 14.5689462 7.6117788 11.3979390 10.7310500 9.3198189 1.2492633 4.5469315 8.2169573 8.8713025 11.0504200 1.2492633 5.9680677 6.9907178 10.1087854 10.9459284 5.1561417 5.6415691 4.6184853 10.3750945 11.7575406 1.8342258 13.2976807 6.5651554 7.6472814 12.5962259 13.6876959 12.7344929 7.9122157 10.2010209 11.0720870 10.5656000 10.6611147 4.0905571 8.8076714 11.8113340 11.8697759 NA 10.3446477 9.9092464 -0.3356992 4.0915560 9.5560718 11.3070167 10.5307943 9.1450782 15.0729827 10.0251351 10.8251049 8.8216350 2.9862107 15.8190172 9.1829413 13.6090916 12.7313863 9.6221157 10.0218402 7.9566096 9.6872870 -0.00092485 0.00000000 0.00000000 -0.00178330 -0.00178330 -0.01544800 0.03258100 -0.00593420 -0.00593420 0.91645000 0.98062000 2.23100000 0.00974580 0.00974580 -0.00510470 0.00479630 0.00479630 0.00265380 0.00265380 -0.00579600 0.00988510 0.02246300 0.09668900 0.09668900 0.09668900 0.04020300 0.04020300 0.04020300 0.01826100 0.03483700 -0.00092485 -0.00192180 -0.00178330 -0.00095211 -0.00980050 -0.00524300 -0.00524300 -0.00593420 -0.00593420 -0.00593420 0.01281300 -0.00289110 -0.73695000 -0.00101040 -0.00101040 -0.00101040 0.02190200 0.00974580 0.00974580 0.00871080 0.01221300 0.00265380 0.00265380 0.00265380 -0.00579600 0.00988510 0.02246300 -0.70969000 0.09668900 0.09668900 0.00960650 0.04020300 0.04020300 0.01826100 0.01211500 -0.24386000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 2.167 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 2.167 0.000 0.000 0.000 9.3045329 13.7180019 9.4040686 9.8210032 2.9437526 10.3968795 3.0566009 0.6643008 8.1216687 8.8051180 0.2492633 7.2150349 2.9122091 10.2963745 9.2131101 1.4716557 8.1440683 9.0447493 9.6075354 10.7812818 9.1714285 7.0085844 10.7394330 2.5711671 10.3998441 9.7993561 5.2034479 NA 10.8531859 3.1878469 13.0978083 12.1729495 8.1278123 10.4332994 7.8882897 9.3577750 5.9862152 0.2492633 -1.3356992 8.4241764 9.2082866 10.1067133 10.3716472 3.2492481 8.2435096 7.1481044 10.8488536 6.0566052 9.7464371 -1.3356992 10.8952091 2.7517422 4.4456473 9.8574746 5.7235777 5.1400219 9.3411267 7.4651876 7.3189242 -1.3356992 13.9930682 0.2492633 9.9479552 -0.3356992 9.5431053 5.4844669 8.1420463 8.9714889 12.917885 4.664289 8.962351 12.558537 10.515647 10.278538 13.443905 12.325955 9.212147 10.543488 12.668421 10.519546 8.871302 9.494011 1.471656 7.568170 11.495199 11.010248 7.052305 9.258613 9.529248 7.992963 10.619589 6.783229 7.909841 10.572305 7.179988 4.949689 4.522269 5.773232 11.316013 10.509386 9.174924 8.876176 10.800959 5.652974 9.964068 10.645855 11.512324 9.844819 10.277617 8.697711 -1.335699 9.028893 7.147137 6.963496 10.945928 8.030610 10.571554 10.375095 6.824159 14.048195 10.267451 10.700462 12.739934 10.960057 9.759026 1.249263 TCGA-A2-A04P 36 1 548 NA breast stage iiic t2 n3c m0 4-9-2014 female 2003 NA NA infiltrating ductal carcinoma no 18 black or african american NA 56.62.0 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 2.705843e-06 6.938058e-07 11.2735756 5.2026410 7.1350443 11.7552841 -0.9470277 9.3429138 NA 8.7808153 10.4241271 10.4071443 9.2537936 8.2817135 8.1718358 9.5255858 8.0330347 8.9201736 10.3020084 10.3680446 8.0273094 4.8857842 11.5202458 10.7502970 11.1108867 10.1129152 9.0472483 10.3249414 6.3748239 10.6885768 2.5123280 1.3748447 7.2228200 10.8387560 13.1433382 7.8276819 11.5357029 11.6141829 10.7052918 5.9836321 1.0529027 8.9983388 9.4864805 10.0648210 6.2328046 7.8730737 NA 12.0795913 10.4718017 7.6189493 10.2841162 11.1054630 7.0641219 6.8342549 2.9597887 14.8054839 11.7385198 1.6378421 8.1692391 NA 5.0972905 8.3725669 10.4953201 8.9747358 10.0842515 9.5427429 10.1515850 2.2228046 10.7799645 10.5641534 5.6967506 6.7111066 0.6378421 7.5567206 14.6572744 7.1331792 9.7679990 9.6094009 9.8842021 2.9597887 0.6378421 9.0918141 14.7720698 12.0740484 NA 4.6967506 7.2574661 10.9205598 11.0588703 4.9108765 6.9108765 3.4452102 8.7892969 12.3266906 NA 12.7898253 4.6074842 6.3566756 11.2482671 12.5372144 12.6035215 6.6528077 10.3955252 10.1659859 9.3635077 10.1718361 2.9597887 8.5764568 11.3070378 9.3860502 NA 10.5666225 8.8144463 0.6378421 5.0365737 9.2525673 8.8968161 9.3149899 8.2865148 15.6507438 11.0190399 9.2720636 7.6189493 2.7533264 12.1018926 7.5123265 13.1875619 13.0467179 9.4548411 10.6836171 7.5725312 9.1628301 0.013907 0.123140 0.310010 -0.476070 3.656900 0.571300 0.674060 0.601380 -0.330870 -0.315760 -0.315760 0.653140 0.424690 -0.086139 0.968220 0.611000 -0.477170 -0.354640 -0.487300 -0.494910 -0.484700 0.112130 -0.492870 -0.492870 -0.492870 1.399000 0.526600 0.526600 -0.471310 -0.363520 0.013907 0.015028 -0.461630 0.012934 -0.933270 -0.496420 -0.476170 0.604130 -0.062092 0.121520 0.309210 -0.006505 -0.939270 0.771950 -0.465360 0.626060 -0.506500 -0.086139 -0.946860 -0.510430 -0.438440 -0.357150 0.283170 -0.511880 0.193300 -0.613260 -0.537440 0.823330 -0.514930 -0.492870 -0.630350 -0.569220 0.526600 0.286280 1.306900 -0.130790 0.108 0.108 -0.438 -0.438 0.283 0.283 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.274 0.274 0.360 -0.111 0.000 0.000 0.000 0.000 -0.461 -0.461 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 0.108 0.108 -0.438 -0.438 0.283 0.283 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.274 0.274 0.360 -0.111 0.000 0.000 0.000 0.000 -0.461 -0.461 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 9.0186792 12.5647711 4.4452102 9.4781109 6.1297096 11.5922961 3.5764617 3.8602477 9.1189841 7.3102829 4.0528940 7.6490844 1.3748447 10.7173423 9.8144461 2.5123280 8.6472195 10.1653344 6.9294123 11.9477127 9.0843205 6.4958390 11.5913264 NA 9.0835620 10.1515850 2.7533264 NA 9.9355380 3.0529027 13.0348189 12.3446412 7.9477129 9.0876938 10.1034238 11.1650086 4.9355399 1.8602477 NA -0.9470277 9.0444168 11.0301749 9.4864805 5.1614201 9.0922664 8.5547320 10.5572174 6.0972884 10.7939405 6.0301749 12.1820169 2.5123280 5.3566756 10.6719319 7.1906544 7.3196812 8.7602542 8.0186792 9.0429988 6.9537623 13.9007842 0.6378421 10.6565213 0.0528332 8.6913307 4.6676026 8.5326754 8.9924742 8.4836401 8.6151374 9.3348250 11.5357029 10.1088552 11.4718017 7.8730737 8.4452123 8.1914230 9.7332545 13.4550410 9.7358895 14.7720698 7.8473111 -0.9470277 6.7739937 9.7173423 10.826858 5.607484 9.205154 8.333666 4.725321 8.915455 7.516419 6.108177 10.112915 10.942399 3.445210 4.097291 10.134957 10.377075 10.334825 7.667605 10.036601 6.410446 7.725321 8.974736 10.426848 10.349238 9.109533 9.889734 6.487523 NA 9.564173 8.465147 8.814446 11.058870 5.462285 10.386050 8.789297 8.083562 14.649754 10.225947 10.226572 12.142842 10.921332 9.279307 3.222820 TCGA-A2-A04Q 48 0 NA 1276 breast stage ia t1 n0 (i-) m0 4-9-2014 female 2004 2179 NA infiltrating ductal carcinoma yes 0 white NA 56.62.0 4 4 2 NA 3 2 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.39057e-07 1.112456e-07 11.5133599 4.8541952 6.6253772 11.6912987 -0.3746360 9.6874240 NA 8.7713099 11.5726495 11.1579773 9.0004173 7.4771268 8.3030976 9.8762683 7.8225944 9.5095484 8.2638138 10.2719365 8.3919069 7.6449688 10.4491431 11.3871368 13.3025469 10.7011911 9.3785946 10.6288957 8.9405274 9.9927925 0.2103889 2.3258181 8.9314396 11.6731834 12.1600455 6.6366058 11.7016924 10.7601250 10.9199985 5.3118773 1.4327457 9.3301460 9.1132179 10.0495441 8.7789297 8.4880152 0.6253640 11.6793037 10.1102007 6.3188645 9.7896562 11.1167299 8.6725017 5.8445463 0.2103889 15.4467030 11.2728070 1.6253640 8.4708679 NA 7.5997924 9.6765867 9.9096236 9.3344617 10.1187330 9.1081857 10.3927346 5.7021921 10.4026331 10.7355348 3.7128379 8.0807051 8.1528547 7.2103402 14.7360854 7.5175867 10.6491321 9.6588008 11.0047561 2.9473108 NA 8.4988221 8.5080209 13.1548693 -1.3744489 5.0176948 7.2474301 11.2089307 9.8613920 6.5795739 8.3617798 4.6914672 9.9096236 11.8130392 3.5322671 13.8622515 5.6806591 7.2178346 12.2145608 12.9586030 12.5465679 6.7234098 10.4132803 10.6140625 9.9131132 10.6588008 3.4327323 8.3240824 11.7535333 9.3473315 1.4327457 10.7684421 10.2506300 1.2103265 3.4838545 9.6477457 9.7207749 9.5730147 9.3744092 15.2418405 10.2982451 10.3297137 7.2364027 3.1489341 13.5105975 8.6211449 13.1717900 13.3383346 9.6880985 9.9263022 8.2710362 10.3993412 -0.0414460 0.4556400 0.3234000 -0.0431770 0.0122700 0.0329860 0.0207630 0.0249690 -0.0690920 -0.1365200 -0.1365200 0.6178800 0.1277100 0.1277100 -0.0365380 -0.0365380 -0.0365380 -0.0040162 -0.0040162 -0.1803000 -0.0666540 -0.1161300 0.0301690 0.0301690 0.0301690 0.1004500 0.1004500 0.1004500 0.0284810 -0.0402090 -0.0414460 0.0000000 0.0122700 -0.0702690 0.0329860 0.0207630 -0.1401300 0.0249690 -0.0690920 -0.0402090 0.0293250 -0.0016629 -0.1365200 0.7373900 -0.2196000 -0.0563070 -0.0563070 0.1277100 0.2502700 -0.0976290 -0.0365380 -0.0040162 -0.0040162 -0.0040162 -0.1803000 -0.0779130 -0.1161300 -0.0231550 0.0301690 0.0301690 -0.1136900 0.1004500 0.1004500 0.0241270 -0.0037409 -0.1071000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 10.3919067 13.2573506 1.4327457 9.0219827 4.9473061 11.8773040 3.7952994 3.6253757 8.8469649 9.8052868 -0.3746360 9.4170210 3.8348325 11.2694594 9.0745263 2.5322671 9.0209119 9.7713099 8.0868570 9.8595964 8.8198144 7.3802654 11.1895273 3.0176903 8.1722725 10.3927346 3.6253757 -1.3744489 11.2784468 1.7953098 12.9177713 12.7254652 7.9938843 9.6281929 10.3914926 10.1909559 5.6697723 3.7952994 NA 0.9473295 9.0036728 10.1391054 7.9916998 3.1489341 9.1897369 5.7021921 10.3279834 5.1645369 9.7417218 2.8733014 11.2201689 3.2692277 4.5322671 9.7945825 7.2060512 9.0745263 10.2266843 9.6505174 11.7520822 4.5322671 13.7052792 0.2103889 11.1049055 NA 8.9618843 4.5561167 7.6833694 8.0004170 11.918816 8.456685 9.298687 11.701692 9.826889 10.698180 8.488015 9.105158 9.331010 10.955174 13.880628 11.242616 8.508021 8.172272 1.210327 7.780196 10.949840 11.130693 4.834833 8.687424 9.199025 8.408376 9.978707 9.031583 7.538267 10.701191 8.463006 1.795310 6.987322 8.251908 12.786273 11.682693 7.915673 9.194284 8.741722 9.842124 9.334462 10.696505 10.935422 9.365158 10.560174 7.894504 -1.374449 9.544100 8.145014 11.029987 9.861392 6.825050 11.225988 9.909624 7.596921 14.038642 10.340482 10.555376 12.983754 10.807772 9.181884 5.269235 TCGA-A2-A04R 36 0 NA 2499 breast stage ia t1 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 74.60.0 3 1 1 2 NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.185488e-06 5.203543e-07 11.3711874 5.2628616 5.9861515 11.5487858 -1.4651415 10.0565402 NA 9.8404316 11.5635365 8.4037624 9.9700891 6.2073658 9.4971127 9.1868883 6.5902217 8.3960267 9.9716513 9.8602452 6.2002748 1.1198873 9.7419542 9.7296965 14.1937370 9.3702007 8.8680950 10.6818266 3.0585070 10.6818202 NA 0.1199537 6.6998473 12.3529227 12.9451261 6.5236247 12.8039203 13.5053153 7.7993827 7.1161401 3.9272612 6.9984641 8.8836679 9.9742512 9.4229219 13.1805419 0.1199537 9.8512212 14.1285351 3.4418287 9.4183468 11.1638409 8.4053044 8.4160535 0.8568662 12.0484206 6.5007240 1.3422703 8.7649601 NA 3.6224033 9.6551776 10.3812137 10.5915775 10.9585809 9.0337889 9.6190837 NA 11.3575106 10.2183730 4.3678323 7.0971820 NA 11.6605147 14.0266363 7.2034351 11.3485205 11.1236544 7.4388218 0.5349580 0.5349580 6.2284262 8.9121501 12.3546199 -1.4651415 5.9527925 7.6770466 10.5752295 11.0876088 6.5517482 3.3929219 4.1199039 9.8574313 11.8795131 6.8110638 13.8737458 5.7733450 7.2797740 11.9955236 11.4342967 12.7711035 8.0347858 10.5800168 11.4416425 11.0424867 10.5214929 4.8924930 8.3788610 11.4369379 11.3862984 NA 10.3248809 8.9001685 1.3422703 3.1793677 8.5165069 9.8613692 10.1156694 8.8307088 15.2380998 11.0602158 9.7036119 8.4818458 5.9272565 16.0682467 10.1542427 12.3526230 10.9887248 10.0672957 9.0076306 7.9820227 10.5362705 -0.0622260 0.8020800 0.0485460 0.0119580 0.0149020 -0.8793800 -0.0050260 0.0026357 -0.8824000 0.0055529 0.0055529 0.8354900 0.0242680 0.0242680 0.0045800 0.0045800 0.0230050 -0.0022168 1.5905000 -0.0252820 0.0093857 0.0137720 -0.0023553 -0.0023553 1.5615000 -0.0221950 -0.0221950 -0.0221950 0.7769500 -0.8516300 -0.8317100 -0.0049844 0.0119580 0.0102850 0.0227250 0.0000000 0.0000000 0.0026357 -0.8824000 -0.8922800 -0.0153290 -0.0023553 0.0055529 -0.0101590 -0.0101590 -0.0078863 -0.8714300 0.0242680 0.0197830 -0.0089906 -0.8750600 -0.0022168 -0.0230000 -0.0155880 -0.8654700 0.0093857 0.0144700 -0.8647300 -0.8637300 -0.0042929 -0.0033243 -0.0221950 -0.0221950 -0.0073339 0.0030522 -0.8711100 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 7.7395106 13.3236071 5.4774539 9.8243823 3.3422987 11.1133124 0.8568662 -1.4651415 9.0207691 7.6010286 NA 7.6385163 -1.4651415 10.6853217 9.4244437 1.8568662 6.4358069 9.5868283 6.6744917 11.6423203 9.2079219 7.2831328 10.5300002 0.1199537 9.8506554 9.6190837 2.5349331 2.2353901 10.8900155 3.6224033 12.3073574 11.6392109 7.3390706 9.5517481 7.8341480 9.4282412 3.9612066 1.8568662 1.8568662 0.1199537 8.9475095 9.4538030 10.3847357 3.7443979 6.4945356 7.8703302 9.9132346 5.5573090 10.8784031 NA 10.8384351 1.9943625 4.1787943 10.1406276 7.3104183 2.3422987 9.4327851 7.0506399 5.3422952 NA 13.7381730 0.1199537 10.2029383 NA 8.0876087 3.9943715 7.9379517 7.9315448 13.715544 5.622403 7.671931 12.803920 9.942234 10.207807 13.180542 12.419301 9.142270 10.905900 12.974900 11.793506 8.912150 8.872562 1.119887 8.079904 11.644934 10.494942 7.042734 8.032792 9.566985 9.407615 9.351619 3.782870 4.119904 9.370201 4.534939 1.534958 5.734612 6.824590 10.092403 9.350323 9.973212 9.622403 12.561031 3.289834 10.591578 10.661322 10.311784 9.231907 9.792917 8.487681 -1.465142 8.209255 6.517934 4.316298 11.087609 6.834147 9.432029 9.857431 6.448427 12.818462 9.619084 9.206481 11.748348 10.671290 8.481846 -1.465142 TCGA-A2-A04T 62 0 NA 2246 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 0 white NA 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.724306e-06 4.727937e-07 12.79798982 0.47601870 6.50396722 11.37919044 NA 9.43388939 NA 9.17823434 11.72280232 8.18514551 9.28582988 9.22760584 9.23844367 9.53540622 9.59694762 7.47606165 9.73168051 11.33034574 8.82810506 8.78326249 10.33287629 11.06898587 14.39599579 11.32527133 10.39455230 10.92778803 6.93138877 11.98174058 7.23094942 0.47601870 7.83361371 11.47658998 12.85625220 5.77984277 12.28311472 12.89048272 8.95280792 6.37087917 1.79800903 8.40383990 8.68307602 10.96766433 6.95584167 3.56352425 0.79800903 12.04330486 8.85544005 8.10359573 9.42515882 11.22404486 8.43606354 6.73815713 1.47607056 13.48433934 10.06486534 1.93549746 9.55887603 0.06101577 5.25742179 9.22089557 10.39566994 8.88757279 10.45262591 9.86891575 9.87159588 4.60534617 11.54231914 10.85516928 3.64598980 7.73580511 0.79800903 8.35411271 15.14087009 7.28251487 10.83773144 10.40901462 9.89602188 2.93549746 1.47607056 9.51017293 9.62008252 9.61048802 -0.52387758 2.72399534 7.02680891 12.76088585 9.98137705 5.04591907 7.01522101 6.52591070 8.11630653 12.21563140 -1.52408503 13.23225317 3.72398443 6.95584167 9.77812938 12.99698729 12.47244695 6.49842960 11.02656805 11.49252184 11.33091453 11.65767993 4.58458374 7.90651424 13.10274041 8.69280762 -1.52408503 10.39156765 9.67143403 2.28341807 3.64718785 10.25331710 12.02957104 11.10814818 9.25413883 14.58207252 10.85598152 8.96088466 6.67081910 7.24093345 11.90782050 8.90337455 11.63829571 11.32096359 10.44292764 10.32155182 7.89391428 10.77807516 0.428730 1.467300 1.612800 1.400200 1.074000 0.990970 0.195580 0.547530 -0.336640 0.417470 0.423350 1.907600 0.410110 -0.283580 -0.394080 0.290080 0.290080 1.844800 0.293740 2.041000 -0.384700 0.273950 -0.410470 -0.381490 -0.366910 -0.348820 0.524850 0.153230 0.430750 0.086666 0.428730 -0.942470 -0.407250 -0.452540 -0.047801 -0.419530 -0.419530 1.350800 1.603300 -0.354450 -0.473850 0.406440 -0.451680 1.350300 -0.444950 -0.194870 0.171660 -0.283580 -0.952900 -0.280130 -0.427430 0.792000 -0.309120 -0.336870 -0.244840 -0.384700 0.019083 0.399610 -0.410470 -0.381490 0.343230 -0.358860 0.153230 -0.413990 -0.440560 0.069669 -0.419 -0.419 -0.427 -0.427 0.477 0.000 0.549 -0.385 -0.375 -0.366 -0.052 -0.381 -0.381 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.416 0.000 0.623 0.623 0.411 -0.419 -0.419 -0.427 -0.427 0.477 0.000 0.549 -0.385 -0.375 -0.366 -0.052 -0.381 -0.381 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.416 0.000 0.623 0.623 0.411 8.2574213 11.9173201 3.4302585 8.7012690 4.0907688 13.0499456 1.7980090 4.2834181 9.0084177 8.4504764 5.3587057 8.9512783 3.9996212 11.4091991 9.0142507 1.9354975 7.8069787 10.6011523 8.0999432 8.8170246 8.9164429 7.7979896 11.0589094 0.9819257 9.3176261 9.8715959 0.7980090 NA 10.6149734 1.6459783 12.8083781 13.1580687 7.4647467 9.8423840 8.3979026 10.0093914 4.9190063 2.6459783 -1.5240850 1.0610158 8.3587048 9.3355965 6.3829525 4.6053462 9.5711553 5.5635243 10.6017981 5.7979909 11.7517498 2.0610158 13.0919787 2.7979883 6.4244283 9.8651822 6.3077491 5.7979909 8.8114521 8.0171586 8.1572999 5.1484868 14.4676279 -0.5238776 11.4734176 5.1199164 9.4273464 3.8336188 7.5871977 8.0306506 9.459055 9.671434 9.548194 12.283115 11.273521 12.225722 3.563524 9.001582 9.434904 12.136838 12.973602 11.464924 9.620083 9.251672 3.761466 7.376928 11.083392 10.853543 4.030654 9.021026 9.687950 4.815914 10.811466 7.011337 5.991762 11.325271 9.253317 3.283418 9.786674 9.687244 13.864113 12.139731 8.372394 9.288239 8.676960 7.137840 8.887573 10.217107 11.728432 11.642696 11.151798 8.828105 -1.524085 9.283634 8.572777 7.544840 9.981377 9.765504 10.690077 8.116307 7.766219 15.059336 10.766369 10.430985 12.036872 11.165841 9.512922 1.798009 TCGA-A2-A04U 47 0 NA 671 breast stage iia t2 n0 (i+) m0 4-9-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.57.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 1.318231e-06 3.122126e-07 10.7588000 1.3772348 4.3772557 11.3384173 0.0553345 9.5651040 -0.9448043 7.8464921 10.3038496 6.1106117 9.2377234 5.5471814 7.4260165 8.7984802 10.0225552 9.5601479 8.9440722 11.2202359 8.7312861 1.3772348 10.3476506 11.9168036 11.2556146 11.0496824 10.6127927 10.3828815 4.3032547 9.9823660 6.1533615 1.6402970 6.2937328 9.0595494 13.4708727 5.4303689 11.0200308 10.8525851 9.2961203 6.6700387 NA 8.9904940 8.6865061 15.8888738 7.2985025 5.7832497 0.0553345 11.1338134 5.0553302 9.1494067 9.3602506 9.9448328 9.7027874 6.7695747 3.1427892 12.7181909 10.0247154 NA 9.2327485 NA 3.9133107 7.4604706 9.7798428 9.5581607 7.7592324 8.3244556 10.3962917 11.5436712 9.4710708 10.8984648 5.9008185 5.2841476 NA 11.1401373 13.8782980 6.6926783 9.7678559 10.2574528 10.4768678 3.4476453 1.0553345 8.7365673 7.0721369 10.1160248 NA 6.2550021 6.8168800 11.6656617 11.1058578 6.6700387 5.2841476 4.2252518 7.2937337 12.3858257 2.3772626 12.4796265 5.3591100 8.4303685 11.5047355 12.0754408 12.2453079 6.7135405 11.0815065 11.3349395 7.9262177 11.3159545 2.1697006 9.0036961 10.8646951 8.6002935 0.6402507 10.6237602 11.6584916 1.0553345 5.9978434 9.2339937 7.9831070 8.7626880 8.7781366 14.8522557 10.7475085 8.2889486 6.4128814 2.2252441 10.8925626 7.1267912 11.1038158 11.2568402 9.2841476 9.7259851 7.4216508 9.5462399 1.2605000 0.8051900 2.2850000 0.4847500 -0.0659840 -0.0639720 -0.0070576 -0.0036011 -0.7696200 -0.0373540 -0.7317000 2.0457000 1.0772000 -0.1160000 2.2522000 0.4816500 0.6057500 -0.0859880 0.4515600 -0.7740500 -0.7131000 0.7952900 -0.1260300 -0.1806800 0.1480100 1.4697000 1.3003000 0.2172900 -0.0659840 -0.0997360 0.5343200 -0.1855900 -0.7513200 -0.7483800 0.6388300 -0.7128300 -0.7036100 -0.0705360 -0.7150600 -0.7176400 -0.8517000 -0.1329000 -0.7472500 0.1659500 2.9692000 -0.0550950 -0.1187400 0.5297600 0.4356400 -0.8290300 -0.0268510 1.5920000 -0.2504300 -0.2633600 -0.0678600 -0.7551300 -0.7457400 -0.8167100 0.2584000 1.1095000 -0.7632100 -0.8935000 -0.2110700 0.4621200 0.1495000 -0.0257560 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 6.5391448 12.2197645 0.6402507 10.2271312 2.1445033 13.1335631 NA 2.8626894 10.6166168 8.6002935 2.2252441 7.8659003 6.7967963 11.1241072 10.3962917 4.6700415 4.9622205 11.0728333 7.2889482 9.5401519 7.4941212 7.0496819 11.0776968 -0.1209216 6.4815944 10.3962917 1.3772348 NA 9.8890097 1.6402970 13.1276290 14.2558061 6.4731813 8.3772570 9.0956186 11.2586769 3.3032547 2.0553345 NA -0.9448043 8.6937650 9.9659717 7.5906043 2.9622158 9.2272313 7.5828059 11.1234354 5.2841476 9.6846855 1.8626696 10.2781238 0.0553345 4.5471845 9.1752686 5.6251857 4.1427892 8.2744974 6.2451534 6.9318461 3.7557635 14.4399441 0.0553345 10.4481830 NA 8.5867103 5.3221156 8.8068731 8.6175714 11.037955 9.478445 8.477394 11.020031 8.831762 11.195839 5.783250 10.866704 9.276916 10.066556 12.599810 11.559651 7.072137 8.939500 2.862689 8.347651 9.372741 10.5024122 2.8626894 8.8675061 9.2202359 10.3407312 10.3755992 3.3772626 4.6991851 11.0496824 12.7191094 0.6402507 10.6089583 7.9253545 12.2614275 9.1106115 7.5749651 9.2402044 4.5471845 4.6700415 9.5581607 9.6051135 9.4095783 10.8667036 10.2233742 6.3314526 NA 7.0027025 5.7135391 4.9622205 11.1058578 6.1106117 11.3636679 7.2937337 8.1794503 15.3034974 11.0918460 10.3772571 13.4936660 11.0272317 9.0997231 1.8626696 TCGA-A2-A04V 39 1 1920 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 1 2 NA 2 4 1 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.39057e-07 10.5822384 6.4460378 8.4136546 11.7672916 -0.2954821 10.3211196 NA 9.3063415 11.7798829 12.0752582 10.0665147 7.7973282 9.1255837 9.0163191 8.5578803 8.8299843 10.0321234 9.8751219 6.8694779 4.5119234 11.4548591 9.3663489 12.7784613 12.3165178 9.1329310 10.4097712 5.0264991 10.1645095 NA 1.2895394 7.9830204 10.2182984 13.7984010 7.8052331 13.3311355 13.4037095 9.2476026 5.7379950 3.0264991 6.8744958 8.5764760 7.6500149 7.2320477 13.7452458 0.2894804 10.3375660 15.4012396 1.5119234 8.2676528 10.6430478 7.0354876 5.3769953 -1.2954821 13.2950251 9.3220383 1.8744822 8.5547577 NA 3.7489657 9.1423228 9.6839960 10.0516386 11.0180208 8.8209148 9.6463521 0.2894804 10.5741647 10.0790670 5.4989880 7.0839494 8.5578803 11.4955302 14.7730972 7.1550813 10.6649349 10.9830203 9.5780150 0.2894804 -1.2954821 7.7101955 8.3681288 10.1113073 -1.2954821 6.9619590 6.8943958 10.8965554 10.9158508 7.3339273 5.5500603 5.0796085 10.2805827 12.8083504 2.0264814 13.2655604 4.8338515 7.4694424 11.6780889 12.6536680 13.0022036 7.5594390 10.3206601 11.2009253 10.7963434 10.7523764 3.9525013 8.8869653 11.8962470 12.7738528 1.0265168 10.3434592 8.8707340 -0.2954821 3.3489972 9.1318837 10.7683029 10.3627823 8.3663489 15.4349481 10.0382853 9.2668132 8.6054377 1.5119234 15.5856728 6.4050104 12.3527037 10.4380099 10.1742126 10.2490524 7.6732377 10.0168865 -0.00104920 -0.00104920 -0.00069303 -0.00719580 -0.00719580 -0.02320300 0.00106020 0.00704850 1.50860000 2.78060000 0.81552000 0.77195000 0.01656500 0.01656500 0.01516800 2.48810000 0.02777800 0.00471900 0.00471900 -0.01006500 0.00930980 0.03538300 -0.81170000 0.03990200 0.03990200 0.05138700 0.05138700 0.05138700 0.04160000 0.05494500 -0.00104920 -0.00622860 -0.00719580 0.00263570 -0.02320300 0.00106020 -0.01813000 0.01349200 -0.00912860 0.00499690 -0.00235530 0.00000000 0.00208050 0.00597000 0.00597000 0.00597000 0.04372300 0.01656500 0.05110300 0.02707600 -0.83041000 0.00471900 0.00471900 0.00471900 -0.01006500 0.02862200 0.02790300 -0.83259000 -0.81170000 0.03990200 0.01447000 0.05138700 0.05138700 0.04160000 0.01796300 -0.81260000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 8.2668132 13.9569776 7.9429754 9.4652907 3.5625477 11.4824425 -1.2954821 -1.2954821 8.7087915 8.4426632 NA 8.9520831 2.7045622 10.2049148 9.1526872 4.2281337 8.7241615 9.2998282 8.4694424 10.4690278 9.1304056 7.0083513 11.1946696 1.8744822 9.8058899 9.6463521 2.1640139 -1.2954821 10.7031613 1.8744822 12.9800406 12.2831794 7.5780149 9.9566449 7.8543180 9.4076092 2.6114557 0.2894804 -1.2954821 3.2895394 9.5547577 10.2509830 10.1475143 5.1475143 5.6587685 6.6875646 9.9411831 4.1964261 10.0298763 -1.2954821 10.6334593 -0.2954821 4.2895320 9.9253966 6.6264114 0.7046064 8.9772006 7.8644425 5.0083524 1.5119234 14.7887356 1.5119234 10.2227322 -1.2954821 8.6009031 4.0264991 8.1118388 8.4084745 15.9199103 5.4859291 8.6189559 13.3311355 10.5425929 9.9876592 13.7452458 13.0264285 9.0037102 10.3174393 12.6317932 10.7726773 8.3681288 7.8286919 0.2894804 7.4222473 10.4969544 11.148291 6.971357 9.024243 10.385809 8.304484 10.808203 5.823512 4.405012 12.316518 5.844122 NA 7.224207 6.295607 11.612588 10.238387 9.340289 9.389319 10.109180 4.485929 10.051639 11.003206 11.510718 8.670355 10.279164 7.781387 NA 8.534531 6.737994 2.164014 10.915851 7.836428 10.996029 10.280583 6.676115 15.208412 10.459041 10.046090 12.399364 11.131622 9.748965 2.026481 TCGA-A2-A04W 50 0 NA 1948 breast stage iib t2 n1mi m0 2-10-2014 female 2005 NA NA other specify yes 1 white not hispanic or latino 85.58.0 6 3 2 NA 1 5 2 2 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.809913e-06 6.591155e-07 11.8613404 5.4869299 6.1671732 11.0715297 -0.8881674 8.2641747 NA 8.6393671 11.1397959 7.3926609 9.5997301 6.9884075 8.4584037 10.2955254 4.6664782 8.6236427 10.7334840 10.1887055 6.8800745 -0.8881674 9.4053617 12.2031601 13.9748179 10.2418170 8.6549217 10.2360113 4.2411766 9.6285749 -0.8881674 2.1118993 7.7665263 10.9663688 12.0354310 7.0776745 16.5829856 10.9768499 11.4259067 6.1779796 NA 8.0631745 7.4517403 10.0389271 7.8053769 12.9270731 NA 10.8278520 10.0463181 7.7485149 9.5043576 9.9111716 9.7439764 6.9760760 0.6968841 13.5536897 8.5548336 2.5713128 6.6354526 NA 4.5042072 9.6077449 10.4738338 9.5926802 9.0514692 11.7920297 10.3219524 0.1118326 11.1147050 9.7575484 5.8932506 6.4782114 NA 7.6393668 15.3782007 7.9798482 10.0285158 10.1453129 8.0396681 2.1118993 6.6275893 7.7375989 8.4782122 12.4483965 0.6968841 5.9573807 7.5835650 9.4694420 10.7334840 6.6968521 4.6664782 5.1993543 9.8372563 10.9601216 -0.8881674 14.0958188 5.6196859 6.9945333 12.6314034 14.4336772 12.3676562 7.9192447 10.3146261 10.8218354 9.8617594 10.9280737 2.6968618 8.4847548 11.5122358 10.4400039 -0.8881674 10.6583022 8.8226964 0.1118326 2.8123339 9.9822546 10.5355311 9.5936893 8.9046804 15.8458983 10.1189172 8.9095514 7.0067076 1.1118993 14.6964415 10.2824410 13.6930906 11.8480805 9.0891700 9.3763325 8.1259104 9.8702298 0.2635000 0.2635000 0.2638200 0.0039639 -0.0124500 3.6569000 0.2390000 -0.2326900 3.6569000 -0.0570400 -0.0570400 -0.0570400 0.0029918 0.9252400 0.1977900 0.0000000 0.0000000 0.0624460 0.0624460 0.0384270 1.4621000 -0.2370900 -0.2478100 3.6569000 -0.0916090 0.0577340 0.0577340 0.9468100 0.2232300 -0.2248100 0.2635000 0.1615400 -0.0078474 -0.0092980 -0.2466000 -0.2367300 -0.2367300 -0.2326900 -0.2326900 -0.2301500 0.2275500 0.2324000 -0.0570400 0.1371000 0.1371000 -0.2379500 0.1387300 -0.1938000 0.0013588 0.1977900 0.0000000 0.0624460 0.0624460 0.0139380 0.0120370 -0.2333000 -0.2370900 -0.0060123 -0.2478100 -0.4895700 -0.0151140 0.0577340 0.0577340 0.0163650 -0.0167640 0.2079300 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.214 -0.214 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.214 -0.214 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 9.0704427 14.0973317 7.2411728 9.8924297 1.6968396 11.7069143 1.1118993 0.1118326 8.5692708 8.8981597 NA 7.7843155 1.6968396 11.5244598 8.9111714 -0.8881674 6.8734417 8.8550413 11.0966644 9.6930905 9.4011942 8.3550639 11.9272733 1.1118993 7.2667078 10.3219524 2.2818169 NA 11.8858533 1.4338141 13.0492638 12.5807685 7.9573801 9.4145288 7.3645558 9.8916094 4.7843155 2.6968618 0.6968841 8.6196844 7.8667776 9.8800743 9.6442458 4.7266024 10.7446580 8.6779440 9.5815318 6.7118032 9.2424606 1.9192638 10.7024770 3.6354526 3.4338141 10.0053356 8.2102642 4.6968507 10.2980042 6.8866770 8.7521351 -0.8881674 13.6769325 NA 10.6912059 NA 9.2373034 4.9192447 8.5465183 8.7229147 12.339930 8.826136 11.709244 16.582986 10.023282 11.360707 12.927073 9.338302 8.490207 10.485843 13.119706 9.750326 8.478212 9.149437 NA 6.619684 10.598222 11.7173695 3.9192447 9.1411773 9.3786766 6.6117360 10.3132911 4.9192447 5.4156708 10.2418170 9.6864835 3.5713249 7.2308313 6.9619520 13.0259013 10.4705411 7.7412465 9.5579394 8.9431973 4.4694432 9.5926802 10.2039864 9.8726099 9.7674208 10.5386789 8.8634340 7.1286986 9.8305941 9.2311295 5.9945322 10.7334840 7.8295661 10.9772366 9.8372563 6.8192492 14.1485358 10.1576496 10.4847550 11.4483966 11.0055707 9.0631748 0.1118326 TCGA-A2-A04X 34 0 NA 1686 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white NA 56.63.0 6 3 1 NA NA NA 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 2.224912e-07 12.8149652 2.5278961 6.5558085 11.6364266 -1.4719288 9.6259344 NA 9.4879041 11.6455453 12.5648485 9.9557388 7.0076821 6.6311902 9.7257331 7.8832530 9.7591234 9.1499541 9.9056551 6.7422218 4.9541684 10.8574183 8.9739516 14.0971941 10.0252550 9.6199985 10.8210864 7.5640755 10.1264200 -1.4719288 2.1128669 7.6153648 12.2240004 13.1087496 8.0257542 16.0396085 12.1156797 8.4615928 5.0670621 0.1129003 6.7373555 8.5763891 5.2827882 5.0514635 13.3180470 0.7879339 10.5026753 13.3804317 5.4227208 10.8149392 10.1896803 6.5222551 8.9852830 0.5278711 15.6455182 9.9520371 NA 7.7226593 NA 6.0277490 9.1380042 10.0519542 9.8749698 10.6409932 8.7251188 9.9105263 4.3858866 9.9975441 9.7864683 6.1426115 7.6073873 1.9873209 8.9383534 14.6421326 8.3568639 10.8710879 9.6040498 8.6571852 1.6978183 1.1128336 5.7946888 8.5763891 10.0031290 NA 5.7470705 6.6623280 9.8345336 11.4519724 4.8498292 6.7663063 5.2003278 9.7452541 11.8232407 3.3352546 13.2293170 6.8721984 7.6648931 11.5051821 12.6707272 12.5886825 5.8498292 10.7561196 10.0617186 9.4872377 10.6763788 3.5278961 8.7993652 11.6229695 11.6759020 NA 10.1481220 7.8543317 0.1129003 3.6982296 9.5187153 10.6367533 9.0930042 8.7876453 15.5851862 10.1356948 8.8339640 8.1109849 2.6978183 15.4476850 5.4820996 12.0557457 11.6072203 9.1100442 8.7312501 8.0177499 8.5683974 1.7124e-02 3.6569e+00 5.3169e-01 1.6783e-02 3.2422e-02 3.2761e-02 2.9466e-02 5.2853e-01 -5.4421e-01 -5.9522e-03 -5.9522e-03 2.3286e-02 -2.1613e-03 -2.1613e-03 1.2332e-01 -1.1089e-02 -1.1089e-02 4.6424e-05 2.0343e-02 -5.3764e-01 -5.1227e-03 -6.9195e-03 -7.6678e-02 3.6569e+00 1.1223e+00 -1.0880e-01 -1.0880e-01 -1.0880e-01 4.7306e-01 -1.0145e-01 1.7124e-02 1.8523e-02 1.6783e-02 3.2761e-02 5.1956e-02 2.7886e-02 2.3145e-02 5.3731e-01 -5.4421e-01 -5.4421e-01 -5.9397e-02 -5.5557e-01 -5.5307e-01 1.0842e-02 1.0842e-02 1.0842e-02 -8.7645e-02 -3.1859e-03 -3.1859e-03 2.2638e-01 -5.6575e-01 4.6424e-05 2.0343e-02 -4.3741e-02 -5.3764e-01 -5.1227e-03 -1.5329e-02 -3.5312e-02 -7.6678e-02 -6.1873e-01 -5.3896e-01 -1.0880e-01 -1.0880e-01 4.2755e-01 3.3127e-02 -8.3200e-02 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9842567 12.0996548 8.6763788 7.5558085 5.3352581 10.7388778 3.7758302 NA 8.1015492 8.0475384 -0.4721289 6.0700050 1.1128336 11.1407707 9.1194247 4.4586379 7.5993647 9.9939787 10.4283917 11.7025158 9.8150605 7.5279023 10.8109906 1.3352546 9.1398491 9.9105263 2.1128669 NA 12.8383730 2.2283570 12.3136611 12.4971088 7.6416443 10.2235655 11.1034414 10.0553792 2.7758302 3.4347883 -0.4721289 0.5278711 9.0167465 10.1231597 11.3306205 1.3352546 4.5095248 7.6153648 10.3125371 5.6047178 9.7970289 NA 8.0767242 1.8498392 6.8985893 8.6941656 7.7414198 7.5831843 8.5123205 8.8876517 9.9955077 -0.4721289 14.2175726 1.5279211 11.0144859 NA 7.5750264 6.1128648 8.2844586 8.9955077 13.2543737 7.0592839 8.6584729 16.0396085 9.9105263 9.9980526 13.3180470 10.9832294 8.8832533 10.2034182 15.7490928 9.3360620 8.5763891 9.5229626 0.5278711 8.5250819 10.8627341 10.827969 5.822524 8.374959 6.019755 8.146618 9.532432 7.707811 8.116617 10.025255 5.242149 NA 2.615369 8.185614 9.670647 10.859659 8.114742 10.026253 8.671286 7.292773 9.874970 11.135464 9.701579 8.749489 10.643921 6.928781 -1.471929 8.852195 9.594287 9.182538 11.451972 5.747070 10.835388 9.745254 7.869977 14.231021 10.405186 9.761522 11.534929 9.889846 9.062205 4.255825 TCGA-A2-A04Y 53 0 NA 1099 breast stage iib t2 n1mi m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 white NA 56.63.0 3 1 2 NA 1 4 1 2 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 8.343418e-08 11.490793529 7.042389348 7.554763806 11.490290282 0.742264967 10.540898982 NA 9.641924210 11.468653670 8.845553089 10.145703308 7.656351207 8.539278255 8.799715498 8.741137623 9.874122235 10.452382826 10.901632018 7.348114657 3.120783224 12.908742143 9.555405125 14.406379106 11.468483381 9.513094329 10.882839343 6.246884980 10.254808135 NA 1.227679474 8.281423778 11.953301729 13.131627648 8.536681222 12.860297804 12.923790195 9.427364390 5.658742754 2.005292186 7.459256189 9.126832993 10.838716796 6.227692949 13.302884635 4.742264967 12.254511846 13.148204399 3.777893084 9.651864324 11.047643012 8.047870975 5.829727808 0.005328121 13.314058607 10.227949686 0.420293749 8.127696211 NA 4.005301170 9.483057962 9.908177176 9.113823934 10.706894841 9.767958472 8.977800803 0.742264967 11.340317690 10.163909262 5.777887825 6.904152890 9.217187813 10.750973898 13.958738251 8.664379726 10.187693899 10.886668492 9.044218690 0.005328121 7.661128204 7.651558340 8.556046542 10.858609161 NA 5.253225373 7.339200644 10.743391851 10.678903170 4.879769471 7.178560286 4.397618165 10.730381824 12.131251146 3.590266665 13.209055443 6.120777005 8.020249937 11.555084261 12.934866256 12.990252038 7.673002305 10.350335134 11.151443955 10.053818252 10.930854034 3.629787907 8.815871264 12.299537425 9.050604269 NA 10.050149034 8.904152890 0.742264967 4.944211899 9.088335620 10.632225403 9.965301478 8.482383252 15.488569567 11.164750522 9.829197562 9.761855862 1.742264967 14.939911931 6.085673214 11.946836331 12.179913256 9.891504249 9.366512375 8.117304398 10.192709410 -0.12486000 0.40194000 0.91016000 0.00000000 -0.05428600 -0.00678130 -0.00774820 0.00968720 0.00968720 -0.56616000 -0.55236000 3.65690000 0.01070300 0.01070300 -0.02205800 -0.02205800 -0.02205800 0.00291330 0.00291330 -0.00954260 0.01117300 0.01488800 -0.54239000 0.01670500 0.54806000 0.03665300 0.03665300 0.03425400 3.65690000 -0.09432800 -0.12486000 -0.56863000 0.00930980 0.02398700 -0.01244600 -0.00774820 -0.00774820 0.06923900 0.00968720 0.00341580 -0.00097017 -0.00097017 0.00166420 -0.00725670 -0.00725670 -0.49590000 -0.01106000 0.01070300 0.01070300 -0.02205800 -0.02205800 0.00291330 0.00291330 0.00291330 -0.00954260 0.00833510 0.01488800 0.03059100 -0.54239000 0.01670500 0.00944910 0.03665300 0.03665300 0.01195800 -0.00138580 -0.54421000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 8.945857857 12.380157964 3.943902578 9.046045988 4.253225373 10.411150163 1.005328121 0.420293749 8.035047046 8.191826638 NA 7.201696586 4.959496611 11.356606961 10.006707848 3.879764571 7.610161874 9.127696211 9.138013449 11.651258211 9.906714606 7.582728351 10.980669921 2.934459887 9.446860604 8.977800803 2.943902578 NA 11.425610780 2.590266665 12.965180823 12.941876203 7.451004173 10.262687427 10.208647595 9.773483928 7.597756857 2.005292186 -0.579706251 5.714957072 9.283749109 10.508131395 10.540575021 4.175221180 9.077700179 8.171881331 9.809430683 6.590262173 10.169787613 NA 9.564357970 2.420347653 5.733218743 9.806226409 6.099816972 5.005301170 9.885903460 7.775687969 9.296086361 0.005328121 14.440926459 0.005328121 10.731517770 -1.579490650 9.568813644 5.486424775 8.183549537 8.577684110 13.391782767 7.188521593 9.054240444 12.860297804 10.693278815 11.689025309 13.302884635 11.791160690 8.515734131 10.222449581 12.803771412 10.246885573 8.556046542 8.925156216 0.005328121 7.513094329 14.393810266 10.771828 5.351074 8.530168 9.787752 8.671819 10.168794 7.250060 9.602111 11.468483 7.201697 0.742265 5.064193 9.030707 9.450315 11.158218 8.916192 10.494479 9.573889 5.959497 9.113824 10.495816 11.984606 9.129421 10.550586 8.027667 NA 9.176451 7.116888 6.600246 10.678903 5.035048 11.437735 10.730382 7.351074 14.127804 10.696171 10.606451 11.443052 10.404043 10.425962 2.590267 TCGA-A2-A0CK 60 0 NA 4159 breast stage iiia t3 n2a m0 2-10-2014 female 2001 NA NA infiltrating lobular carcinoma yes 4 white not hispanic or latino 227.33.0 NA NA 2 2 NA NA 3 3 3 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 2.503025e-07 10.6047123 7.9710210 6.9068906 11.6835618 1.0144981 9.7142455 NA 8.7640339 11.6936277 11.7568090 9.8423186 7.2624275 9.4331955 10.0218073 6.7259947 8.3843149 10.3838788 9.6336190 6.9593575 2.9405051 11.6809011 11.0418527 9.5964533 12.4139911 8.9791293 10.3026735 6.5813151 9.9997723 1.0144981 3.2161289 7.7177114 11.1112147 13.0760058 8.4804740 13.3644995 13.0834793 9.9889141 7.5994621 4.6233109 7.3720519 8.5047487 8.8910166 7.5222943 13.0196328 0.2775087 10.9481902 14.5032435 6.2924836 9.5586140 10.1035527 9.3930111 4.8423202 NA 14.4344200 10.0583471 NA 9.2249273 -1.3075728 3.4474602 9.1156875 10.1225012 9.9843178 10.7693870 9.4549536 10.3127913 3.0144981 10.7024001 10.7471758 8.1963970 7.2239525 11.6173840 10.8916303 14.6543829 6.7973801 9.8302030 10.4950878 7.8995859 3.2775385 1.0144981 8.4918531 7.7314908 10.5404118 -1.3075728 3.6467733 7.1723515 10.0923835 10.6155275 6.0412999 5.3219281 4.6925723 9.9831663 12.0691039 1.4999352 13.7050651 6.2548132 7.6981962 11.7813597 11.3856228 12.2360867 8.7024002 10.4841414 10.8098899 10.9871922 10.7529297 3.4474602 9.1167377 11.8868666 12.3069362 -0.3073943 10.4950878 8.9273889 1.4999352 3.9043589 9.0490235 10.5896606 9.7177110 8.6039634 15.1756787 10.4281275 9.1611956 8.1334407 5.5873890 15.2379282 7.4441154 12.9294079 12.1498241 10.2180923 10.3680876 7.6054610 10.6687239 0.00235810 0.68333000 0.69914000 -0.00332430 -0.00332430 -0.00512270 0.01140000 -0.00539920 -0.00539920 0.00471900 0.00471900 0.00471900 0.00499690 0.00499690 0.08449800 3.65690000 -0.68997000 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00930980 -0.68970000 0.08045600 0.08045600 0.00485790 0.00485790 0.00485790 0.01572700 0.00235810 0.00235810 0.00041593 -0.00332430 -0.00512270 -0.00512270 -0.00705760 -0.00705760 -0.00539920 -0.00539920 -0.34607000 -0.00387790 -0.00664320 0.00471900 0.00458000 0.00458000 0.00458000 0.00958830 0.00499690 0.00499690 0.08449800 -0.69626000 -0.00124730 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00930980 -0.72491000 -0.69555000 0.08045600 0.01880300 0.00485790 0.00485790 0.01572700 0.00541390 0.01586600 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8774467 12.7750532 5.3790733 9.9640345 3.8488082 11.0813960 0.2775087 -1.3075728 9.4016552 8.4755697 0.2775087 8.5411946 4.9593575 9.7444602 10.0201241 4.3930111 8.2278469 9.2737721 10.3781963 10.3409291 9.5280061 6.9261916 11.1884265 2.4999352 9.4085336 10.3127913 4.5994606 NA 10.8537034 3.8218530 12.8606951 12.2008615 9.8063136 10.2224900 7.9593581 9.6862176 3.6925723 1.8625109 -0.3073943 3.6467733 9.1313634 10.1550737 9.5706223 6.7747199 6.9916874 7.9165734 9.9957814 4.0848892 9.5775051 -1.3075728 11.2442797 0.6926057 4.4474602 9.7143080 5.8282304 4.1188331 9.9165731 8.7680506 6.9686956 -1.3075728 14.1985691 1.2775087 10.4906382 NA 7.7396956 5.7586603 7.5063528 9.1019623 15.3443899 5.1355143 8.4441154 13.3644995 10.4967025 10.2845612 13.0196328 12.4681817 8.5660156 10.1375863 13.1874271 11.6264465 7.7314908 8.2180924 0.6926057 8.1924176 11.0808579 11.229062 6.664114 9.073033 9.707289 7.911740 10.481828 7.067611 7.473931 12.413991 6.968696 NA 10.867185 6.906939 9.309120 10.200861 7.874966 10.155074 8.587389 4.977976 9.984318 10.899586 10.316910 9.780697 10.495895 6.902025 NA 9.157475 6.412782 5.902025 10.615527 5.216133 11.587200 9.983166 6.686925 14.814914 10.286896 9.838504 12.537866 11.335751 9.762021 1.014498 TCGA-A2-A0CL 37 0 NA 1964 breast stage iiia t3 n2a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 9 black or african american not hispanic or latino 85.58.0 7 2 2 NA 1 3 3 3 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 11.9999989 7.9256618 7.1864956 11.1140394 0.1530270 10.4104600 NA 10.1540111 11.6764707 8.9689890 9.8266758 8.4522804 8.6883475 9.9267609 4.9604283 9.9539720 9.2173657 10.6294808 8.2298878 4.7178573 10.9004260 10.4311343 13.6411633 11.3523355 9.3470081 10.6111370 8.5310055 10.0483949 0.5681294 2.5681051 10.0828236 11.7191262 12.3591708 7.0275411 11.5282926 9.8787224 9.4423225 5.6555722 1.1530919 7.6582222 9.3371210 12.1836243 7.4136000 11.2947536 -1.4320652 11.2668143 12.5814323 4.0275433 9.6675824 10.4888347 7.9711216 4.4507560 0.5681294 15.0599051 11.5679106 3.9943715 9.0151928 1.3754565 5.8627316 10.7582430 10.5977420 9.7286114 10.3604932 9.4869730 10.5514596 2.8900380 11.3609000 10.3790829 4.9604283 8.2209548 2.3754565 7.9943744 15.1238821 8.6834786 11.5994663 11.2939019 9.9512739 2.0275433 5.4507527 8.5681097 9.5482491 12.0233084 NA 3.9604283 7.2405347 10.6763073 10.6938460 5.7969273 8.7417868 5.5106234 10.6818518 11.7303436 4.2119623 13.1662785 6.3560117 7.7677819 11.9090724 11.8452517 12.8190002 7.7102168 9.8213663 11.0224089 10.2367376 11.3590690 5.1974644 7.9964701 11.2860002 11.1166908 1.1530919 10.4955173 9.2119659 2.8900380 3.6190491 10.2502264 11.0982721 9.9393418 10.0280534 15.2534607 10.8222525 10.2088064 6.3428960 3.2685542 14.1889022 6.5849174 12.6754902 12.6109660 10.2973055 9.5765382 7.8832591 9.6209833 -0.0302300 0.0662290 0.0662290 -0.1712600 0.0363700 0.4168700 -0.1206900 0.0000000 0.0000000 -0.2225600 -0.2225600 0.1971000 0.0716780 0.1801100 -0.0572500 0.7368200 1.1227000 0.0533940 0.0833420 -0.1229100 -0.0697670 -0.1218700 -0.0086463 -0.0086463 0.0670880 0.0091705 0.0091705 -0.0444900 0.5253800 -0.0302300 -0.0302300 0.0488300 -0.1712600 -0.2419200 -0.1506700 -0.0773920 -0.0773920 0.0000000 0.0000000 0.0199230 -0.0807860 0.0549450 -0.2225600 -0.1913700 -0.0355850 -0.1046200 -0.1046200 -0.1184800 0.2024400 -0.0572500 -0.1353600 0.0774300 -0.2818000 0.0700990 -0.0312230 -0.0697670 -0.1222000 0.0712480 -0.0086463 0.0670880 0.0642250 0.0091705 0.0091705 0.4614400 0.0081959 -0.1478500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 -0.105 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 -0.105 -0.105 0.000 10.880709 12.917529 7.582130 10.420249 7.006402 10.361306 7.039784 NA 8.555374 7.784855 NA 8.832552 3.474994 10.579686 9.404160 3.322995 11.004561 9.871320 10.322580 9.729242 8.689811 7.694814 10.852355 4.426090 5.362526 10.551460 6.115004 NA 11.296243 2.375457 12.822105 11.973916 8.141757 10.058459 11.144358 9.160567 7.278916 1.890019 1.153092 2.816047 8.810093 9.101439 9.357643 5.579337 9.315212 7.510624 10.151663 6.419859 9.838989 NA 10.468599 5.907960 4.498844 9.807541 5.722523 8.687051 10.115968 9.573032 9.740537 -1.432065 13.406526 1.375457 10.704140 NA 7.799331 5.153072 7.869606 8.543957 12.673178 7.261597 9.545390 11.528293 10.312103 10.168487 11.294754 10.182359 9.893415 11.050918 13.600586 10.796928 9.548249 8.201105 1.153092 7.548249 11.412031 10.9705888 4.3229953 8.8809925 8.3028194 9.5081368 9.9955115 9.6805492 8.1680227 11.3523355 6.9817374 0.8900186 5.9256624 8.9719099 10.6730360 11.5430619 7.7102168 8.0234367 10.6944914 9.6542459 9.7286114 10.4701078 11.1670926 10.2209546 10.2497873 8.9034999 7.6475944 9.6300749 9.9159747 9.8655992 10.6938460 5.1828194 10.8804254 10.6818518 7.9604700 13.3439694 10.2637729 10.2209546 12.6183835 11.0265162 9.2874984 4.2405357 TCGA-A2-A0CM 40 1 754 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.110089e-06 2.42832e-07 12.2522915 4.0939235 6.6393552 11.1132860 0.8844807 10.4581145 -1.1155974 9.3510536 11.8122453 9.3033741 10.2885444 7.3315503 8.7014510 10.4192565 7.3397948 9.4467097 9.7724494 11.1535940 8.4618960 4.5568953 10.7420596 12.4039807 13.0995452 10.6221371 9.1465621 10.5969943 7.7236712 10.6191727 -1.1155974 0.8844807 8.5727177 10.1910987 13.0778386 7.0034088 11.1474430 11.4175537 10.2030101 7.6191767 5.7173584 4.4694302 8.6543052 9.8588819 7.0085889 5.7913583 NA 11.9589433 7.7362166 5.9612830 9.4245953 10.8089087 5.0742913 6.8674604 1.2063932 15.0677995 12.5094912 -0.1155974 9.6038561 -1.1155974 5.2420194 9.1132861 10.5005566 9.1721797 9.9897210 10.0131061 9.4964142 5.7913583 8.8152046 11.2162240 3.9288630 8.0718195 1.2063932 8.8717312 15.2517285 8.9582073 10.7792851 10.3263740 11.0156812 2.7913557 NA 8.3232593 9.6707370 10.2120199 NA 3.8386594 7.4618960 10.7074364 11.4440834 5.5709668 7.5568923 8.0865911 9.1252587 12.2770530 1.8844807 13.4042878 3.0543970 7.3882929 11.8218411 13.7259334 12.8201848 6.0137503 10.4950308 10.8170512 10.4902107 11.5722803 5.3107327 8.0085889 12.2609997 9.8900919 NA 10.3403082 10.0437080 2.4694172 3.6020055 9.6451872 11.7171596 9.5019347 9.8063083 15.0874137 11.0118169 10.4996371 6.8731525 1.6918021 11.6189652 6.6055669 12.1101266 11.6059938 9.7126039 9.7006509 7.7362166 10.5093679 0.174460 1.129800 -0.070058 0.319020 0.552760 -0.021980 -0.257620 0.246590 0.539350 0.424790 0.424790 1.340300 1.212200 0.324720 0.126170 -0.334960 -0.334960 -0.051644 0.370540 -0.233420 -0.095837 -0.105380 -0.270980 -0.270980 -0.270980 -0.291590 3.656900 0.016645 0.539700 0.143040 0.174460 -0.005873 -0.237950 -0.251940 -0.100710 -0.301740 -0.313940 0.246590 -0.122310 0.513430 -0.111090 -0.110000 0.279410 0.507170 0.507170 0.161540 -0.079452 0.324720 0.267400 0.157640 -0.363490 0.020703 0.166940 0.325370 -0.677400 -0.104130 -0.126210 0.316350 -0.739880 -0.270980 -0.235850 -0.291590 0.016645 -0.457940 0.286370 -0.304450 0.325 0.325 0.118 -0.217 0.000 0.000 -0.677 0.000 -0.126 0.283 0.283 -0.308 -0.308 0.278 0.122 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.304 0.000 0.000 0.478 0.478 -0.162 0.000 -0.302 -0.302 0.247 0.247 0.000 0.000 0.623 0.623 0.507 0.000 0.276 0.325 0.325 0.118 -0.217 0.000 0.000 -0.677 0.000 -0.126 0.283 0.283 -0.308 -0.308 0.278 0.122 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.304 0.000 0.000 0.478 0.478 -0.162 0.000 -0.302 -0.302 0.247 0.247 0.000 0.000 0.623 0.623 0.507 0.000 0.276 8.9096069 13.3083711 1.4694172 9.1477366 3.2767795 11.4072940 1.8844807 NA 8.7762511 5.6393537 NA 7.3232593 2.3438910 11.1945120 9.4759897 0.8844807 8.1084690 10.8949954 6.9343160 9.1216773 8.8614179 7.1836751 10.5413390 2.4694172 8.8872822 9.4964142 0.4694693 -1.1155974 10.3149199 1.8844807 12.4037350 12.6542019 6.8674604 9.3872992 10.5599833 10.1996169 -0.1155974 3.2063932 1.6918021 2.2063932 8.4352139 9.1406759 6.3274107 3.6918245 8.6414073 7.3315503 9.9884107 4.4991762 9.2638457 1.8844807 12.5606448 3.8844709 4.2767870 9.4690259 6.8250453 6.1790890 9.3346476 8.6934315 8.7898544 5.7913583 12.9444876 2.2063932 11.1905290 NA 9.2475070 3.8844709 8.4505213 6.6658276 12.491682 10.719728 8.041814 11.147443 9.307583 10.506977 5.791358 10.566584 8.427499 10.594843 14.179483 12.973173 9.670737 6.343898 -1.115597 7.356143 11.569873 10.7655812 5.3274107 9.3783228 8.6225596 8.8745714 10.2935983 8.1442106 5.0543927 10.6221371 10.7054440 0.4694693 8.5692157 10.0608151 13.0975715 11.2156642 8.1882481 9.6191769 8.8872822 8.0841398 9.1721797 10.4153613 12.6524448 11.6950389 10.5948433 8.9343160 NA 9.4324028 7.4694302 8.0914814 11.4440834 7.6918224 11.2546097 9.1252587 8.5265188 13.7422539 10.8592404 10.1629167 12.8026783 10.9959290 9.4371364 2.3438910 TCGA-A2-A0CO 85 1 3492 3409 breast stage iib t3 n0 m0 2-10-2014 female 2002 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.503025e-07 10.8344752 9.3369173 6.8175427 12.0251179 2.0626398 9.9963462 -1.2591156 9.3618635 11.6688757 12.0851621 9.6025899 8.1836711 9.2633091 10.2470350 6.9933925 9.1048621 11.0897322 9.5720347 7.8980747 5.7960110 11.7892144 11.3924520 9.8949128 11.4616130 9.0524759 10.0649080 7.8802790 9.8413834 0.7407117 2.6476138 9.1596342 12.4902827 12.2340826 7.2603635 13.3990506 12.4992631 10.5936471 5.3700841 2.3257030 6.8068164 8.5971531 9.6325112 7.9256031 12.2710119 0.7407117 11.1298210 13.0145960 7.0214986 9.6565173 10.1059564 9.7755265 5.7851216 -1.2591156 14.8226694 10.5043382 4.4686485 8.9767417 0.3257318 5.1669926 9.6025899 10.0080994 9.5846486 10.4648150 9.5302612 10.5456651 3.3256886 11.1583163 10.9373296 8.3369171 8.1373324 7.3480580 9.9671396 15.2117041 8.0005882 10.4964497 10.7703599 8.2083329 2.9886483 4.4411647 8.5089119 8.5877850 11.7926162 -0.2592883 1.5480913 7.7180074 9.6103214 10.5278138 6.8068164 6.8068164 5.0075140 9.7287020 11.4274469 2.9106559 13.2806739 6.4411681 8.3219281 11.8049650 11.5706484 12.4158024 8.2760029 10.2986698 10.4420340 10.4332907 11.3926761 5.4821932 8.6370599 11.4069515 11.3455124 -1.2591156 10.7279916 8.7782746 2.2001590 4.1354446 9.8732272 10.0916666 9.1659433 8.8738698 14.3969010 11.3818761 9.1939981 9.0916668 3.8700096 15.0721518 9.6788369 13.4363908 13.1088247 9.7400229 9.9100262 7.6446091 10.4605527 -0.4881700 0.5324600 0.5789800 0.0011093 -0.0085045 0.0241960 0.0953630 -0.0849260 -0.0849260 -0.5959400 0.0987060 0.0987060 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4506100 0.0315770 0.0000000 -0.5007900 0.0662290 0.0662290 0.0582240 0.0582240 0.0582240 0.0957320 0.0862330 -0.4881700 -0.0623610 0.0011093 0.0241960 0.0509610 0.0953630 0.0953630 -0.0849260 -0.0849260 -0.0849260 0.0421660 0.0214620 -0.5959400 0.0889820 0.0889820 0.0889820 0.0889820 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4909900 -0.4574700 0.0315770 0.0000000 -0.4960000 -0.5007900 0.0662290 -0.0563070 0.0582240 0.0582240 0.0966700 0.0946370 0.0912440 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 10.3256900 12.8537371 5.5220871 10.5640948 5.8282965 10.9989991 6.5416279 1.5480913 8.8661411 8.2062940 1.0626744 8.6347116 4.5220871 9.3303787 9.7789607 2.4411647 10.2652693 9.3791635 11.4641752 10.4472236 10.0631739 7.7713944 12.3700841 2.9106559 10.0004708 10.5456651 7.6832417 NA 11.2677157 3.7407225 12.7192592 12.0740226 8.8255360 9.9193924 10.0828022 9.5545087 5.4272273 1.0626744 -0.2592883 7.5155146 8.9268418 9.6898247 10.2360829 6.6110927 7.3801043 7.2564276 9.7939747 7.1669926 9.3609474 NA 12.0366399 4.7407279 6.0716447 9.1078691 6.3535968 7.3369171 10.7343735 8.7265693 8.3369171 2.4411647 13.4662535 3.3256886 10.5327043 NA 7.5830775 6.9839011 7.4652415 8.8466359 12.439669 4.468648 8.624898 13.399051 9.874512 9.798719 12.271012 12.523930 8.653183 10.336451 13.753701 12.420867 8.587785 8.277946 1.325674 7.264290 11.059270 11.670171 6.875153 8.528630 8.069403 7.272109 10.263461 8.993393 8.802774 11.461613 7.423722 5.560908 7.809506 6.538259 10.922190 10.954136 7.900599 9.002822 11.228568 7.900599 9.584649 10.483879 10.884111 11.427666 10.564095 8.686171 -1.259116 9.859552 8.397331 8.461827 10.527814 5.859669 11.825536 9.728702 7.635545 13.457493 9.961106 10.488501 13.076537 10.866141 9.917524 3.264296 TCGA-A2-A0CP 60 0 NA 2813 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 2 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.112456e-07 11.1279529 6.7265329 6.8903579 11.3557053 2.2301108 9.7725866 NA 9.0773886 11.2846148 8.5826237 9.7253913 7.7401653 8.3205979 9.3711197 7.0001815 8.6942154 9.8416592 9.5468738 7.3942963 3.1231861 11.2666735 10.9335167 12.4225763 10.6162778 9.4142742 10.0226653 5.8150707 9.8708688 -0.5773364 4.2807337 7.3942963 12.4647538 12.3510858 7.6076277 12.7132034 12.2764519 10.7758993 5.6515713 2.5926843 8.0702111 8.6443394 8.2961967 8.8923944 11.9643331 3.6706817 10.9010165 13.7198837 6.9305469 10.3878152 10.8406050 7.0300833 4.6706817 NA 13.5444058 9.5377961 3.5926723 7.7127712 NA 4.3769502 8.8172152 9.6953823 10.0720086 11.4374704 9.3475649 10.1004721 3.0077158 10.6352489 10.0374623 7.5674108 7.4171057 4.7446832 10.5552522 15.3805574 7.1891485 11.0498303 10.5029038 8.1675862 3.4227578 2.2301108 8.6101046 8.3416158 11.7058408 NA 6.0226652 7.5049016 9.5403956 11.2381358 6.7173735 5.0374613 3.8150733 9.9551083 11.8072664 NA 13.5402332 6.4780350 7.2365338 12.6934858 13.5998605 12.4390385 8.5951799 10.5976782 10.8096927 10.3892579 10.8888289 3.8821833 9.1387144 11.7505858 10.6267122 1.0076978 10.6724585 9.2268835 -0.5773364 4.5174080 9.2524753 11.4647538 9.8729328 8.8698356 15.1074737 10.2635304 9.6150453 8.1301118 2.5926843 14.5418557 10.0383821 13.3479360 12.4232807 10.0030110 10.1975395 7.2556424 9.7300102 1.2939e-02 -4.9449e-04 3.4734e-03 9.7532e-04 -7.5881e-03 -1.4086e-02 -7.7435e-03 1.6794e-03 -1.3509e-02 8.5127e-01 8.5127e-01 8.4149e-01 7.7830e-03 7.7830e-03 0.0000e+00 0.0000e+00 0.0000e+00 -4.7032e-03 -4.7032e-03 -8.4339e-03 1.4315e-05 2.6072e-02 2.1608e-02 2.1608e-02 2.1608e-02 3.5246e-02 3.5246e-02 3.5246e-02 1.3916e-02 1.2939e-02 1.2939e-02 3.3346e-03 -5.6711e-03 2.2589e-02 1.3915e-03 -7.7435e-03 -7.7435e-03 1.2662e-02 -1.3509e-02 -7.1911e-03 -4.7714e-03 3.7512e-03 -4.6470e-01 7.5047e-03 7.5047e-03 7.5047e-03 7.5047e-03 7.7830e-03 7.7830e-03 1.1265e-02 2.6404e-03 -4.7032e-03 -4.7032e-03 1.6713e-02 -8.4339e-03 1.4315e-05 1.4195e-02 -4.3983e-01 2.1608e-02 2.1608e-02 -3.4579e-03 3.5246e-02 3.5246e-02 1.3916e-02 1.4332e-04 -4.3257e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 8.9657843 14.0165521 9.0466340 10.4793901 3.1539350 10.8620640 2.4227443 2.0076978 8.9926081 9.5221003 0.4227712 8.0448045 5.0374613 10.4057461 9.0208050 3.2301108 8.6125770 8.9206044 9.4630422 10.9270749 8.7799084 6.8150694 11.2713754 2.3880793 8.7196688 10.1004721 6.4888411 NA 10.8703523 4.0077158 13.7923498 12.4999020 8.2807337 9.7637151 8.0916374 9.7469330 5.8150707 -0.5773364 1.0076978 6.6515713 9.4630422 10.1717839 9.1489707 5.6125766 8.6508977 6.9065684 10.6328149 6.0374613 9.3311451 2.0076978 11.2536637 2.8821931 4.3769502 9.9007231 7.0193895 3.9463098 9.7781036 7.4942148 8.6563723 0.4227712 14.3331141 NA 10.6150453 NA 9.1110029 5.8821833 7.8363805 9.2333242 12.7668320 4.0077158 8.6871951 12.7132034 10.2373350 10.5247281 11.9643331 12.3256928 9.2155427 10.0995911 12.9348756 10.7339331 8.3416158 9.0484613 -0.5773364 7.1506734 10.3393784 11.4691944 5.6125766 9.0448042 9.4395608 6.4780350 10.3522920 6.1506734 7.4616718 10.6162778 8.1438515 4.0077158 7.5571788 4.9286451 11.6110322 10.2776209 9.2236523 9.8923942 9.8332038 5.0077158 10.0720086 10.8495414 10.6413157 9.7208151 10.6303769 8.5926775 NA 9.6643781 7.3416158 6.9849949 11.2381358 7.7626026 10.8719011 9.9551083 6.7446805 14.8096254 10.2900312 10.5181495 12.8564683 10.9055604 9.6297668 0.4227712 TCGA-A2-A0CQ 62 0 NA 2695 breast stage ia t1 n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 56.63.0 5 5 2 NA 2 1 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 2.224912e-07 10.7910509 4.0698053 6.3353957 11.4500140 -1.4847922 10.0135679 -1.4847922 8.6713005 11.2723990 11.6829491 10.0826982 7.7488369 7.9581606 8.0812714 9.1938176 9.9032346 9.7148898 8.8639456 5.7536233 0.5152078 11.7228418 10.1689581 12.9122235 10.7583914 8.5555071 10.1955769 4.6237440 10.1086085 -1.4847922 3.3732027 6.5759128 10.6935710 12.6176032 7.3700858 12.7114353 12.6990853 9.0964179 8.6040057 4.7440373 5.7148884 8.0426941 9.2043418 5.6132487 13.3351968 1.9746394 12.9406956 14.1301285 9.0803195 10.6325325 10.8959490 6.6496442 9.5116908 0.1001703 13.3929185 12.4119405 1.5152078 8.1169880 NA 1.1001703 8.4939279 9.9139611 10.7743721 10.1473038 8.5555071 9.7044242 -0.4847922 10.5042570 9.8399605 6.9705442 9.4444758 2.4220984 10.1823289 14.6809488 8.9693315 10.8617311 10.7261930 10.0085725 1.3225627 8.8348894 9.1095421 7.6976119 11.6315613 -1.4847922 5.2701065 7.5486401 10.3473162 11.0063189 3.9746486 5.2156553 4.8189988 10.1193073 12.0514646 3.2701103 13.2882535 8.4160843 7.9602319 12.0000403 11.7431341 12.6445809 8.8382720 8.9736239 10.8771612 10.2780270 10.9219539 3.3732027 8.9725982 11.4885560 9.9777197 NA 10.7919234 8.4838843 1.1001703 3.6026825 10.0235074 11.1552363 9.4939279 8.7843440 15.6751971 9.9435775 8.7099743 10.4932127 2.2156475 15.9794201 8.4910654 13.5020371 11.0630759 9.9240778 10.0338705 7.7959883 10.9181202 -0.00830050 1.01040000 1.01030000 0.01028500 0.01028500 0.01293400 0.01070300 -0.68624000 -0.68624000 0.00208050 0.00208050 0.00208050 -0.00798480 0.00000000 -0.00567570 -0.00567570 -0.00567570 0.00402430 0.00402430 0.01000600 -0.00152430 -0.01176400 -0.02000100 -0.02000100 -0.02000100 -0.02808100 -0.02808100 -0.02808100 -0.02041200 -0.00830050 -0.00830050 -0.00318590 0.01028500 0.01293400 0.01153900 0.01070300 0.01070300 -0.68624000 -0.68624000 -0.68624000 0.01126100 0.01126100 0.00208050 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00000000 0.00000000 -0.00567570 -0.00567570 0.00402430 0.00402430 0.00402430 0.00795450 -0.00152430 -0.00719580 -0.67324000 -0.02000100 -0.02000100 0.00180300 -0.02808100 -0.02808100 -0.02041200 0.00083195 -0.16536000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4503824 12.2377047 5.2965785 9.8815395 4.0365825 10.9409578 0.8371359 NA 8.6976119 8.0465991 NA 5.6237411 2.5152078 10.6557277 9.5792865 2.1001703 6.1151311 8.5334177 9.1982120 10.6125912 9.6040320 6.7343858 10.4288548 4.0387786 9.7081265 9.7044242 3.3732027 NA 10.8711190 1.8371359 13.2934999 12.3097348 6.9746486 9.4860424 8.3824961 9.7930860 2.3225627 4.6649663 1.1001703 9.2990342 9.0309173 11.3753344 9.2533095 2.9075252 7.6213354 6.5759128 10.4773904 5.4810018 9.5060304 NA 10.6614678 0.5152078 4.8189988 10.1375713 7.1678115 0.1001703 7.8595130 6.8006191 3.8727697 0.5152078 14.4398907 0.1001703 10.1076744 -1.4847922 9.6994729 6.0774588 7.6263530 8.3978603 13.5174241 4.6237440 8.9612668 12.7114353 10.5870149 11.3632534 13.3351968 11.8347484 9.0850730 9.7761369 13.5377586 8.7452377 7.6976119 9.4378018 0.1001703 8.0831735 10.8722195 10.593702 7.077460 9.063076 9.176105 8.040738 10.144651 7.303120 6.151843 10.758391 5.581306 1.515208 8.426609 6.122695 8.801775 10.210881 7.483884 9.662422 9.070765 2.215648 10.774372 11.004564 10.849211 9.120697 10.572871 7.191175 1.100170 9.587089 8.008492 2.515208 11.006319 8.501059 11.011322 10.119307 7.428106 14.411668 10.186758 10.870844 12.621453 10.015063 10.090757 1.515208 TCGA-A2-A0CR 54 0 NA 3283 breast stage iib t3 n0 m0 2-10-2014 female 2004 NA NA infiltrating lobular carcinoma yes 0 asian not hispanic or latino 227.33.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.336157e-06 5.840393e-07 11.2224793 8.3464840 5.1922849 11.5170674 -0.1652079 9.2704014 NA 7.8487519 10.6620739 10.6364396 8.8375463 7.6802210 7.8736502 10.4145185 6.6549095 9.0575261 9.3883605 9.2724833 7.4531167 5.4494425 11.4455253 11.5594582 11.0420506 11.1339392 9.1645276 10.0713434 10.1555317 9.1683226 -0.1652079 0.8347112 8.6565053 11.2641379 12.3993571 7.2693595 12.2205936 11.9624032 11.1538388 6.3582925 -0.1652079 7.2525841 8.5351708 8.3002976 7.6258944 11.4776854 2.2941649 12.6787503 12.8401803 7.8234156 10.5148709 9.3835531 6.8570989 5.2609967 -1.1652079 15.5024577 12.2781293 -0.1652079 9.7573157 NA 5.6420864 8.9221940 9.2651837 8.9857477 10.2162742 7.9717223 10.5238556 3.6927173 9.9665882 10.1038578 7.4346441 7.2609957 5.4196939 10.1009321 14.3319281 4.2977637 9.4595267 8.9182106 8.5728234 4.1922810 4.7654711 7.7743107 7.0921186 10.8258987 -1.1652079 4.2609967 6.8570989 9.8564053 10.5728235 7.5728237 6.9484735 4.3582908 9.2195149 11.7171832 1.6421008 13.8396100 6.4785868 6.6291468 11.9345721 12.0551095 11.6309736 8.3969738 10.0737330 10.1928329 10.3048816 10.0927083 1.1566555 9.8091457 11.2557441 10.6695972 1.1566555 10.4003093 8.1453437 0.4196468 3.2160202 8.9128819 10.9549691 8.9627254 8.4253183 15.6757672 9.7860159 8.4604399 7.0731358 7.0490502 14.0668523 9.9115467 12.7978982 12.6675223 9.9863821 9.9517249 6.4121599 9.3883988 0.00471900 0.00471900 0.00471900 0.00172770 0.00263570 -0.00553750 -0.00539920 0.00152550 -0.18262000 0.00000000 0.00000000 0.00000000 -0.00041585 -0.00047973 0.00305220 0.00305220 0.00305220 -0.00705760 -0.00705760 -0.08434500 0.00034449 0.00736090 -0.21082000 -0.21082000 -0.21082000 0.01334200 0.01334200 0.01334200 0.00833510 0.00471900 0.00471900 0.00025108 0.00172770 0.00346870 -0.00553750 -0.00180140 -0.00381490 0.00152550 -0.18262000 -0.18262000 -0.00069303 -0.00263620 0.00000000 0.00597000 0.00597000 0.00597000 0.00597000 -0.00047973 -0.00047973 0.00305220 -0.10196000 -0.00705760 -0.00705760 -0.00705760 -0.05644200 0.00034449 0.00736090 -0.15144000 -0.21082000 -0.21082000 0.00875280 0.03594700 0.01334200 0.00833510 0.00332990 -0.21886000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.2294618 12.7249004 5.4346449 9.8736502 8.0850294 10.9098761 7.5694410 0.8347112 9.6596898 8.7535945 -0.1652079 7.0490502 5.1922849 9.7158452 9.5887836 3.0826515 9.5142112 8.3796955 10.7794433 10.9221941 8.9992108 6.1293510 10.8828775 1.8347112 9.5150907 10.5238556 6.0344028 NA 11.1773615 3.4785836 13.8626372 12.5219975 8.0294882 9.4178139 9.4512799 10.1430703 2.9221978 1.8347112 0.8347112 8.8981264 9.6012601 11.5364708 9.1224437 4.5626515 7.8042905 8.6549102 10.0903500 4.7654711 9.4494411 -0.1652079 10.8684983 2.5351820 4.0826600 9.4796509 7.3939172 8.1453437 10.8407066 9.4586127 11.4448333 4.0441843 14.3004251 2.4197007 10.9803450 -1.1652079 8.0897598 6.0921186 7.3185473 9.2745620 12.524963 5.548976 8.322571 12.220594 10.446678 10.167887 11.477685 11.331585 9.068674 9.887978 12.956346 10.640878 7.092119 8.492943 1.834711 6.492943 9.355350 10.696594 4.326588 9.024531 8.903510 6.895427 9.302785 10.008408 9.371950 11.133939 8.366113 3.741618 8.524729 7.817810 8.926167 11.347472 7.654910 10.523856 3.589620 9.075522 8.985748 11.286457 9.171238 10.249416 10.247830 5.024555 6.192283 10.369929 7.024556 9.902838 10.572823 4.964015 11.242265 9.219515 7.244122 15.008155 10.477685 10.073136 12.072240 11.336071 8.831911 2.834731 TCGA-A2-A0CS 73 0 NA 2298 breast stage iv t4b n3a m1 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 12 white not hispanic or latino 85.58.0 5 5 3 NA 2 1 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.946798e-07 11.2918342 -0.1157538 7.0741254 11.2779594 NA 10.1238993 0.4692608 9.1857969 10.9902094 7.2979287 10.0058343 7.1510876 9.2005823 8.7608177 8.6240815 9.3701301 9.6795288 9.5899333 6.4156826 2.5847461 8.8615808 10.9166910 13.6939685 10.5540717 9.1915017 10.4570011 4.6656600 10.5920914 -1.1155974 5.3600341 7.5742991 9.3650910 12.1689804 7.1179204 13.1181452 13.0338892 9.9490436 7.7203510 4.1697006 6.4617299 7.4579480 10.9483699 7.4350476 13.4188469 -1.1155974 12.5088679 14.5548741 3.6391858 10.7460856 10.5113787 7.7076683 5.5707999 -1.1155974 15.1071886 12.4446397 0.4692608 7.9875886 NA 3.2766158 9.4215193 10.0416478 10.5659785 11.6562029 9.1971838 10.2067924 3.4692608 10.4522569 9.4186038 5.8268154 8.1083023 6.7791192 11.2555330 14.3176255 7.2962775 11.4783921 11.0058343 9.6615562 2.0542233 5.1880804 7.5637812 8.2374476 11.5166145 NA 5.9717643 7.8061416 8.8729854 9.8906270 9.7531235 5.0937545 4.2062290 10.0410160 11.4173872 2.2062369 13.6959264 7.9637856 7.7546657 11.9035441 13.6831776 12.1829363 8.6672989 10.3126610 11.0713436 10.4393692 9.9677802 3.8843049 8.6036898 12.0174431 10.5747354 3.8384980 10.5380416 8.5899331 -1.1155974 3.3437347 8.8312072 11.4448725 9.6557903 9.0888720 14.8680070 9.8165156 9.2051014 7.4655011 1.8842853 15.4067138 9.7258652 14.2101684 11.1569306 10.1783471 9.3701301 7.4311950 10.4390432 -0.557530 0.447820 0.462460 0.138650 0.138650 -0.645740 0.029483 -0.317860 -0.317860 0.031436 0.031436 0.025110 -0.218000 -0.218220 0.000000 0.000000 0.000000 0.126680 0.126680 -0.309090 0.024090 -0.333760 -0.031496 -0.031496 -0.031496 -0.054420 -0.054420 -0.054420 0.305850 -0.557530 -0.557530 -0.302750 0.138650 -0.674640 -0.645740 0.029483 0.041600 -0.317860 -0.317860 -0.317860 0.027919 0.027919 0.031436 0.114620 0.114620 0.114620 0.057455 -0.218220 -0.218220 0.000000 0.000000 0.126680 0.107890 0.107890 -0.309090 0.024090 -0.333760 -0.697790 -0.031496 -0.031496 0.032704 -0.054420 -0.054420 0.305850 0.039478 -0.367930 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 7.8983214 13.5208122 5.6524865 9.8297446 1.6604267 10.3821527 NA NA 8.4234597 9.3861380 -1.1155974 7.4767575 1.4692608 10.2604262 8.7956929 2.4692608 6.2593403 8.9624516 10.7020840 11.6713872 8.6203474 6.8209384 9.6656605 1.4692608 9.6582642 10.2067924 2.5847461 NA 10.5549571 1.2062056 13.4774001 11.8366781 7.7941942 9.9843061 8.0365858 9.8268154 3.1322313 1.2062056 -1.1155974 9.1880816 8.9108244 9.3021534 10.2931612 2.3437205 7.7782092 7.5602579 10.6896417 4.4692608 9.7821463 NA 12.7846960 2.2062369 1.2062056 9.9355642 7.4369697 NA 8.8399508 7.8150380 3.6916570 -1.1155974 14.2074964 -0.1157538 10.2140972 -1.1155974 8.6770910 3.6916570 7.8120791 9.4009857 12.791943 4.791189 7.920474 13.118145 9.910133 11.328280 13.418847 11.724095 9.248435 10.554072 13.093526 8.372141 8.237448 9.749261 NA 7.347825 11.241028 10.9211613 6.4842139 8.5063528 9.3478253 8.3126611 10.9558303 5.5707999 8.1393293 10.5540717 6.5063528 NA 5.1131212 4.9823320 10.0870369 10.4716096 8.9463469 8.5299591 11.4946337 4.4078626 10.5659785 10.9846346 10.4273326 9.1238995 10.7262583 8.5567264 NA 9.6167905 6.3920958 2.0542233 9.8906270 5.5136581 10.6001299 10.0410160 6.0441711 13.0789808 9.9644522 10.4753556 13.0718849 10.3766548 8.7546654 -0.1157538 TCGA-A2-A0CT 71 0 NA 2289 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 61.60.0 3 1 1 3 2 4 1 3 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.769205e-06 5.897349e-07 10.9457423 5.0271850 6.2336350 11.6941599 -1.2580801 9.8819734 NA 10.1064644 11.1192643 10.4581734 9.4824066 6.2093890 9.3125871 9.2073490 7.3379724 8.0432789 8.9487971 8.8940674 5.9706006 1.5491270 8.8838896 9.5124466 14.4148708 11.9278969 8.7445977 10.2371380 2.6486725 10.3458632 3.5491393 2.3267387 7.2134581 9.8568262 12.7936713 5.2809415 13.8380860 13.0147768 8.0225531 8.1680473 5.4966701 8.0318015 8.5683312 9.4798748 6.2416286 12.9987284 -0.2582526 8.8305710 14.1982333 2.7417905 9.0547223 11.1141036 6.5426821 10.1442618 NA 13.4323241 9.2424951 2.5491270 10.2648545 3.4422269 3.6959827 9.2934910 10.4146499 9.4916521 9.7950297 9.4008865 9.2925294 2.9117108 10.2707250 9.5817736 6.0271850 7.3379724 NA 9.5958717 14.1000904 5.3055511 10.7696886 11.6383042 8.1701429 -1.2580801 6.6959785 7.0993341 9.1211610 9.2124414 -1.2580801 4.4966733 6.8239315 10.4916520 10.6228966 5.7641497 4.3267459 4.4697037 10.3201553 11.7703794 5.9991702 12.6927030 5.6244256 6.9316074 10.0943778 12.5149218 12.5253948 8.5491374 11.0208127 11.1012577 10.7757493 10.2235821 4.6486725 8.6784206 11.4876670 12.0114937 -0.2582526 9.7254888 9.9359239 -0.2582526 1.7417905 8.8489997 9.7800157 9.0849683 9.4941632 14.6154670 10.0190700 11.1143756 5.9991702 2.4422269 16.1606152 8.7710698 11.1598988 9.9693986 9.1764108 8.8305710 8.1490505 10.5065837 -0.3949700 0.6665200 0.7162200 0.3536500 -0.2617900 0.4643400 0.0389130 0.8297500 -0.8544800 1.6892000 1.6892000 1.6892000 -0.3861500 -0.3787600 0.8026700 2.2032000 -0.8541600 0.0203430 0.0203430 -0.8571000 0.0492560 -0.8560700 -0.8679800 0.7923900 0.7923900 0.1870700 0.1870700 0.2165300 2.1121000 -0.4121200 -0.3949700 -0.3788700 -0.8628000 0.4643400 0.4643400 0.0389130 0.0389130 -0.8730700 -0.8544800 -0.8633400 -0.9365100 -0.8968000 1.6892000 -0.4098100 -0.4098100 -0.4098100 -0.4098100 -0.3787600 -0.3787600 0.7837100 -0.8541600 0.0203430 0.0203430 0.0203430 -0.8519400 0.0492560 -0.8560700 -0.8750400 -0.8760300 0.7923900 0.0583670 0.1337600 0.1870700 0.8213800 0.0080567 0.0000000 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 7.3229836 12.1478547 6.7970649 9.6486732 3.5083779 11.8221005 NA -0.2582526 9.3125871 8.9681947 -0.2582526 8.1102891 3.2012104 10.8905770 9.1596352 3.4966669 5.7075662 10.9621610 10.2886770 11.2697482 10.6269375 7.4106676 10.1638474 1.9116916 8.4474151 9.2925294 2.9117108 1.0637100 10.5366046 4.3856381 11.9038592 11.7283358 7.8581265 11.5380251 7.4071182 9.8997611 6.1511729 1.0637100 -0.2582526 4.2963693 9.3049789 10.0120779 10.9123336 3.5997582 7.7382281 6.8503069 9.8212674 7.4142083 10.2426245 NA 8.8371798 2.6486725 3.6486725 9.2309180 6.1713149 2.9117108 8.0838574 6.5231416 5.7530108 6.5033344 13.3850751 0.3267674 10.2896411 NA 7.6576622 4.9706006 8.8226001 8.4300331 14.508260 6.125488 9.097134 13.838086 8.837180 10.258960 12.998728 9.843758 8.195362 10.695979 12.743191 12.189512 9.121161 8.495000 2.549127 7.736136 11.563756 10.344018 7.545914 8.654672 8.807872 9.604420 10.013462 5.116822 6.701785 11.927897 6.980188 2.989702 4.624428 6.987336 12.646982 8.103726 8.784810 9.774517 12.601026 2.911711 9.491652 10.682096 10.643781 8.127645 10.337506 8.795709 -1.258080 7.537595 6.549138 4.265347 10.622897 5.428283 9.607516 10.320155 7.418022 13.572347 9.862020 10.334707 11.966086 9.924177 9.045563 1.911692 TCGA-A2-A0CU 73 1 158 NA breast stage iia t2 n0 (i+) m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 1 5 NA 2 4 1 1 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4.171709e-07 1.39057e-07 10.9925269 7.9396591 5.8493888 11.2878225 -0.3889221 9.2127546 1.1959775 9.8876899 10.3612723 7.1108299 10.2516808 7.5680861 10.0198444 9.4478234 6.8253035 8.0806257 10.4828892 10.1394380 6.6333513 3.3114305 10.5163710 9.8553479 15.6149520 11.7569161 7.7683306 10.2201627 4.5178741 11.6516127 -1.3891110 -0.3889221 8.1306200 10.8446036 13.1243414 7.3252299 13.6812307 13.5943784 9.4094556 7.6388898 5.2974849 6.4375324 8.6540112 9.0559987 6.3725360 12.5637252 0.1959775 10.2816402 13.9674359 2.4183519 8.8683719 11.3824734 10.3600153 7.4086456 NA 11.9955694 8.4705186 1.6109835 8.3079517 -1.3891110 4.3658745 10.1172915 10.7067106 6.8541578 11.1110789 9.5133591 10.1602873 2.3114159 11.1720332 10.1860505 6.3791687 6.5882634 4.0372504 10.6229100 14.4296410 7.9854583 10.7921362 12.0348877 8.7594605 0.9328927 6.5298475 8.2494197 8.9295268 11.1421217 NA 4.3658745 7.5853982 10.5749638 10.2842931 8.3490764 3.4183384 4.2256914 10.5031473 11.6335252 1.1959775 13.7948519 6.7142716 7.6984470 12.8008857 11.0089259 12.4766206 8.7632688 9.8198280 10.8562395 10.3248000 11.1686870 5.4311616 9.0330488 11.9740236 12.7071226 -1.3891110 10.6222112 9.5476218 2.6109835 3.1389291 9.7890262 9.8398026 9.7136157 9.3633645 15.3915237 10.7594606 10.9652333 8.0765505 4.1345495 15.6170908 7.2256933 12.6837865 10.2081053 11.0014216 9.4875008 7.9530586 10.0859827 0.11480000 0.11480000 0.24257000 0.00673880 -0.06906400 0.42478000 0.00000000 -0.46113000 -0.45494000 2.08620000 0.84840000 1.09910000 -0.44279000 -0.43512000 -0.04190200 -0.04190200 -0.04190200 0.46204000 0.00023271 -0.24377000 -0.43902000 0.01342700 -0.63798000 0.65600000 0.25254000 0.01119500 0.01119500 0.01119500 0.44842000 0.02672800 0.11480000 -0.33078000 0.00673880 0.47161000 0.42278000 0.00000000 0.00000000 -0.46113000 -0.45494000 -0.45436000 0.00104390 -0.00136570 -0.45727000 -0.43783000 -0.00131270 0.01747800 -0.45602000 -0.43512000 -0.44517000 -0.04190200 0.01747300 0.43573000 0.00023271 0.00023271 -0.23942000 -0.43902000 0.01342700 -0.45249000 -1.26970000 0.65600000 -0.43631000 0.01119500 0.01119500 0.44842000 0.45250000 -0.44205000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.253 -0.432 -0.432 0.000 0.000 0.115 0.115 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.253 -0.432 -0.432 0.000 0.000 0.115 0.115 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 7.7530910 11.4817340 7.4844282 9.7136157 3.2582928 10.2593415 2.3114159 NA 8.3808216 7.7142716 0.1959775 7.5118507 5.1808401 10.7887149 9.1874684 4.4438718 9.5939776 9.7952395 8.0927836 9.5846813 9.8246107 7.5651805 11.8205896 2.7809190 9.9050303 10.1602873 5.6984463 1.1959775 11.2432976 3.4689612 12.0513341 11.9232997 8.7103319 9.9723795 6.4183384 9.3741964 6.4627329 0.6109835 -0.3889221 5.3389057 10.1404145 10.0554812 9.6737046 5.0704151 10.4258147 4.6553805 10.1452868 5.4689645 10.0770604 -1.3891110 11.1404145 -0.3889221 4.4183384 9.6536077 5.7207627 2.3114159 9.5186258 9.1365047 4.5651828 1.4183519 13.6729457 1.6109835 10.4871171 -1.3891110 7.1108299 6.3988873 8.7884035 8.3574983 15.1115680 6.7142716 9.0435258 13.6812307 9.5939776 10.1996986 12.5637252 13.6739576 8.9809193 10.8475961 12.4496955 10.2842931 8.9295268 8.9351645 0.1959775 7.2869412 12.8418300 10.6253531 6.1192545 8.6305747 9.1187786 9.5201270 9.5614743 5.5996689 8.6081635 11.7569161 5.8777712 3.1345495 11.0862107 7.9394123 9.7292763 10.1311115 8.9773063 9.5035268 12.1265606 4.3114232 6.8541578 10.2926616 11.7302493 9.5666339 10.4143079 9.7721158 0.9328927 9.0082415 6.7392365 4.7607319 10.2842931 5.2403410 9.9090466 10.5031473 7.2330358 13.3207678 10.5220014 9.1827365 12.4957268 9.6898018 9.2366928 2.1959460 TCGA-A2-A0CV 41 0 NA 1930 breast stage iib t2 n1a m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 4 asian not hispanic or latino 85.58.0 2 2 3 NA 2 1 3 3 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 5.562279e-08 10.8795202 7.8513811 6.9582963 11.0673025 -0.8031412 10.2100677 NA 9.2533828 11.3483959 9.9335697 9.5304594 7.7065202 7.6292867 9.8571867 8.1896832 8.8522757 10.1330149 9.8718199 7.4913657 3.2411385 9.8477967 10.8066163 12.8608590 11.1889753 9.5010963 10.6002897 5.6230094 10.5981580 0.1967329 5.4159141 7.9976447 12.5851660 13.4709048 8.1407250 12.3764209 12.7512140 10.5393754 7.2411394 4.5365938 6.9944066 8.3452216 11.3588216 8.3039620 12.2709702 1.8972017 10.8139829 13.7179774 7.3840973 9.7071729 10.8585231 7.5454734 8.3791392 0.7817374 13.6819703 9.6729293 -1.8033930 8.8261016 -0.8031412 4.2628315 9.9768747 9.7656513 9.4517737 10.9325126 9.7222659 9.8329164 3.6885944 11.2931308 9.7798278 6.4775154 8.2204993 1.0041058 11.5870484 14.4987235 7.0602809 10.6500157 10.4725785 7.9533013 3.0041058 2.1036319 8.2370350 8.9748221 11.5571807 NA 5.6561760 7.2191133 9.9015133 11.2301681 8.3641631 6.3616526 5.1854305 9.6955942 11.6458937 -0.2182626 13.7158284 7.5388198 8.1377924 12.9254096 12.6943474 12.3263501 8.2232686 10.1527581 11.0308210 10.5993228 10.8529464 4.0793866 8.5498921 12.0220020 10.5287816 -1.8033930 10.7845225 9.0032947 2.4446671 4.4061965 9.2888414 10.6321549 9.6381330 9.1574710 15.4256107 9.8522757 9.1385263 7.7222659 3.3260339 14.4645193 7.9246653 13.1926447 13.0977533 9.9785146 9.9495438 8.0885286 10.7942413 -0.01003700 0.67474000 0.70532000 0.36065000 0.37336000 -0.33491000 -0.00013862 -0.37865000 -0.35270000 0.36510000 0.36510000 0.36510000 -0.00443120 -0.00443120 0.00041593 0.00041593 0.00041593 0.00920860 0.00920860 -0.30451000 0.00597000 0.33157000 -0.37741000 -0.37741000 -0.37741000 -0.00553750 -0.02794500 -0.02794500 0.31900000 -0.01003700 -0.01003700 -0.33029000 0.36065000 -0.36409000 -0.33491000 0.01600600 0.01600600 -0.37865000 -0.35270000 -0.35270000 0.35638000 0.36559000 0.36510000 0.34486000 0.34486000 0.34486000 0.34486000 -0.00443120 -0.00443120 -0.00822910 0.00041593 0.00920860 0.01251600 -0.01392500 -0.30451000 0.00402430 0.34128000 -0.38795000 -0.37741000 -0.37741000 -0.00041585 -0.00553750 -0.02794500 0.31900000 0.01223700 -0.38973000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 8.7310478 13.0753229 7.8691706 10.1410911 3.3666719 10.6870946 2.7817164 0.5186358 8.7854597 8.5674325 0.1967329 7.6945968 2.8406042 9.6689282 9.3143882 0.1967329 9.1754555 9.5949544 11.5778824 10.4092415 9.4609121 7.2384038 10.7680237 3.7817059 10.4576646 9.8329164 5.7436388 NA 10.0816788 4.3666719 13.9606576 12.1779556 8.4505927 10.3186023 8.4635317 9.0057093 3.4821513 0.7817374 -0.8031412 8.5696099 8.2149451 9.2828813 10.8272397 3.9516344 8.0306153 6.6765255 9.8656300 6.0232931 9.5712413 -1.8033930 10.4749040 2.1967329 4.2411385 10.2596243 6.8793884 4.7203058 9.0562798 6.7854603 7.2079719 -1.8033930 14.3758183 0.1967329 10.4867639 NA 7.4134908 6.9075517 8.1882669 8.9474520 11.9446999 3.4821513 8.2397723 12.3764209 10.0979890 10.8689494 12.2709702 12.3589790 8.8923561 10.6543825 14.1635434 11.0101255 8.9748221 9.1319102 -0.8031412 7.2246510 12.0091229 11.3740089 6.7551653 9.4000930 8.9558010 6.5231746 10.3436382 6.9382117 7.1304357 11.1889753 7.5254198 4.8549581 9.3311713 6.2610023 11.4985270 10.6443449 8.8530001 8.5399308 10.8126045 5.7281273 9.4517737 10.6502729 10.7845225 10.0272602 10.7812378 8.4458587 -0.2182626 9.4660881 8.4134426 7.1825870 11.2301681 6.5141570 11.0790825 9.6955942 6.8226001 14.7164120 10.3588216 10.5512699 12.7821184 10.2861956 9.4780955 0.5186358 TCGA-A2-A0CW 67 0 NA 1948 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 85.58.0 3 1 4 NA 2 4 1 2 1 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.491682e-06 2.775223e-07 12.5062555 2.1080226 6.7823208 12.4232356 NA 9.5880602 -1.7988680 9.1207283 11.0747564 9.2130461 10.1524048 7.7441517 9.5207921 10.2621536 8.0149014 9.7241919 10.1113879 10.3200611 5.6019995 3.6273850 10.0875787 9.0814688 15.5505395 10.1982994 9.0974525 11.1809024 5.7168208 10.1578591 4.3304006 1.7860945 7.0807035 10.8135278 12.4336908 5.7709744 13.0433230 13.6854709 8.1406994 7.5431950 4.7860840 5.0837623 8.0324271 11.8185874 5.2455147 13.1221241 1.2011320 8.7963774 13.0838586 7.1926420 9.4017429 10.9995918 7.6440632 6.6969745 -1.7988680 15.1987502 11.6891660 -0.2139055 9.1876732 NA 3.0084690 9.8726610 9.3457782 9.5026162 10.9591350 9.8876205 9.2468798 1.3710570 11.1591289 9.6687255 5.0084734 7.1783999 9.5020445 11.5951807 14.1085975 8.1601513 10.8675659 10.6902153 10.2752614 1.2011320 6.8664555 7.0959381 9.0583235 10.1285276 3.1553121 4.0837665 7.4585075 11.0892924 10.6401717 4.0591043 5.4007907 5.5761593 9.4032439 11.5931691 8.2712408 12.8738768 5.5140023 7.0403237 11.4577710 13.3016181 13.3240289 8.1494870 10.9603841 10.7412480 9.7388237 10.4245184 3.1080058 9.7104001 11.2446600 9.8637884 -1.7988680 10.1091372 9.2819374 1.6605636 3.8173060 9.0637575 8.0868161 10.3606760 10.3986439 15.0204883 10.5578471 9.3915620 10.0829987 0.7860945 15.0545879 8.5060417 11.4552628 11.2822705 9.7509046 9.3050633 7.5869824 10.1365318 -0.34870000 -0.04061600 0.35055000 2.49370000 0.01070100 -0.34687000 0.00791750 0.00000000 0.00000000 0.07930300 0.07930300 0.99011000 -0.32077000 0.04599100 0.00402430 0.19497000 0.19497000 0.00069327 -0.00025232 -0.35202000 1.74040000 -0.32240000 -0.66049000 -0.30850000 0.02370600 -0.61844000 1.82880000 -0.03340500 3.65690000 -0.66022000 -0.34870000 -0.69396000 -0.68797000 -0.34687000 -0.35282000 0.00791750 0.00791750 0.00000000 0.00000000 -0.01188700 -0.68305000 0.25074000 -0.71720000 0.00847430 0.00847430 0.00847430 0.00847430 0.04599100 -0.66836000 0.00402430 -0.34159000 -0.67949000 -0.00025232 -0.00025232 -0.66883000 -0.67830000 -0.32240000 0.04060900 -0.66049000 -0.64996000 -0.33641000 -0.61844000 -0.62950000 0.03976100 -0.70001000 -0.65318000 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 0.000 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 0.000 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 7.6869494 11.4102687 3.0590957 9.9430082 2.7986519 11.7413691 1.5230601 1.6605636 9.0324274 6.4442944 NA 7.4632145 0.5230601 11.0868163 8.8467785 3.9290430 6.3304024 9.1676254 8.3226533 10.4743328 9.6344237 8.2523291 9.9886145 0.2011320 7.3070286 9.2468798 1.5230601 4.1553202 10.6934740 1.3710570 12.4227826 12.2674615 6.6315729 9.6466521 10.6370507 10.8035869 3.6273850 2.6605408 -0.2139055 4.9015620 8.5185328 9.9967538 10.3106243 0.2011320 8.6879953 7.8928633 9.7222297 6.5320364 10.1531331 -1.7988680 9.4478606 2.5934255 2.3710570 10.2357848 6.8548609 3.2455109 9.0387478 7.4251219 6.3304024 -1.7988680 13.7253862 NA 11.2604644 NA 8.9058882 4.2011163 8.0791711 6.6482037 11.893309 9.433541 8.216535 13.043323 10.173741 11.112886 13.122124 11.637701 9.303096 10.879280 11.934135 9.474916 9.058324 10.142901 4.830478 8.131857 13.845314 11.0743718 7.1259321 8.5498482 9.6152767 8.9543368 10.8715284 6.2938762 10.7472910 10.1982994 6.3859952 NA 5.0340088 9.8698188 8.8259153 11.0108881 8.0371702 9.7397939 10.3825829 5.0591000 9.5026162 9.5481877 11.6038656 9.5515068 11.2836017 9.2372936 5.3909462 9.8281476 5.4957399 4.1080142 10.6401717 4.7557101 10.7128727 9.4032439 7.6949756 13.0034849 10.1362851 10.0917642 11.5441669 10.7229658 9.4853658 0.5230601 TCGA-A2-A0CX 52 0 NA 1728 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 47.68.0 6 3 1 NA 1 5 2 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.891331e-06 1.526373e-06 11.5421328 5.1504013 5.6682496 11.1747852 -0.3090019 9.5159280 0.2759606 9.4205902 11.2992242 7.3019945 9.5948512 6.7408183 8.2204001 9.5903264 6.6451656 9.5766657 9.3844563 9.8157370 7.1088224 6.2066686 9.5682535 11.6150396 14.2177437 9.4983243 8.9137643 10.4636963 5.3056787 10.7164550 -1.3090019 -1.3090019 8.3312143 11.0159937 11.7706008 8.2320659 16.6767001 13.6004875 9.0811383 5.1828234 3.0832815 6.3563058 8.4902508 7.8906419 7.7994940 12.6721799 NA 10.7267995 12.2468766 -0.3090019 9.2513023 10.4047854 9.6312829 7.2066696 0.6909981 14.4031968 12.9437087 2.6909757 8.8073134 -1.3090019 4.8608933 9.8992037 10.0529132 9.3121056 10.2796840 9.7374113 10.1040684 1.0129262 10.7820742 10.0897130 4.1828194 8.4458570 3.3348257 10.8508407 15.1454775 7.4944548 10.7893305 12.2284305 9.8508407 3.7353597 4.3633954 6.7890015 8.8608942 10.2056834 0.6909981 6.4525213 6.8407162 8.8007999 10.8397637 6.9197882 6.1172337 5.1828234 10.0207657 11.6782334 5.7994940 13.3260072 5.9670948 6.6334835 11.2240557 14.1851687 12.4588435 8.5427185 11.0966427 10.8838786 10.0149023 10.6990478 4.9763728 9.1098761 11.8459456 9.2899522 NA 10.3157648 9.7223260 1.2759606 2.6007455 9.8400814 10.8137974 9.7909746 9.1411497 14.6442337 10.0567450 10.0881091 7.7651110 4.9197882 14.4575242 7.9197882 13.0265691 12.7267994 10.0179606 9.4566698 7.9341432 10.7900640 -0.3812300 1.3708000 1.3708000 1.4534000 0.3795700 -0.0077482 1.4514000 3.6084000 0.0133530 -0.0052610 0.8870000 1.6736000 -0.0080244 0.0048417 -0.2306700 -0.2306700 -0.2306700 0.3580600 0.3541500 -0.1827000 -0.0231550 -0.3621500 -0.4551100 3.6569000 1.6969000 -0.0047079 -0.0047079 -0.0047079 0.3181900 -0.3556700 -0.3812300 0.0416000 -0.3729000 0.0000000 -0.0077482 -0.3765100 -0.3765100 -0.0239710 0.7470800 -0.7596000 0.0225850 0.0225850 -0.0052610 -0.0016629 -0.0016629 -0.0016629 -0.0016629 0.0048417 0.0048417 -0.2306700 -0.2306700 0.3580600 0.3541500 0.3541500 -0.1827000 -0.0231550 -0.3747100 -0.3624900 -0.3648800 -0.3442300 -0.0299940 -0.0047079 -0.0047079 0.3181900 -0.0469890 0.3673900 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 8.2608250 13.6482528 4.3056787 9.2749924 3.9388974 11.1793117 0.2759606 0.6909981 8.7202566 8.5888147 -1.3090019 8.7257684 3.5978648 10.7952405 9.3633947 2.5978648 6.0918479 9.0854321 9.8073134 10.4159095 9.7962887 6.7570579 11.3800938 1.4983019 5.2301300 10.1040684 2.1503972 1.6909534 11.4370637 NA 12.8413513 12.5606596 7.7271431 9.9442260 9.3536378 9.7000981 6.0918479 2.7784399 -0.3090019 4.9197882 8.7435375 9.3844563 8.7929451 3.2145290 9.2260600 6.7570579 9.7657799 6.5797127 9.4366437 0.2759606 10.9173816 3.8202505 3.2145290 9.6053471 6.8710773 4.3056787 9.2066691 8.8007999 6.5047507 7.4491924 13.8838786 -1.3090019 10.2056834 NA 8.6581958 5.5857858 7.9947500 8.3983286 11.1900055 7.7021969 8.1585749 16.6767001 9.9845905 11.2120790 12.6721799 8.8646464 8.7916318 10.5139385 13.2265485 11.6079684 8.8608942 11.0509934 -0.3090019 9.0627461 11.7295455 11.435173 7.778432 8.354528 9.520692 8.316678 10.957861 6.548950 5.214533 9.498324 6.696593 6.905288 9.849579 7.341698 10.863709 10.543499 8.133913 9.111982 9.439162 4.757061 9.312106 10.464521 9.720257 9.457498 10.704990 8.757059 3.820250 8.737971 6.820253 5.985589 10.839764 8.418890 10.630916 10.020766 7.342021 13.311647 9.793601 10.331214 12.058930 10.711949 9.126640 1.498302 TCGA-A2-A0CY 63 0 NA 1673 breast stage iib t2 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 56.63.0 4 3 NA NA 1 4 2 2 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 13.7837278 0.2959581 5.8351712 11.7303810 0.2959581 9.1273206 NA 8.3861259 11.8045510 13.7295336 10.4451254 7.4558845 9.4252965 10.8092475 7.6179412 8.0641979 9.6524653 10.7559573 6.9326376 NA 10.2825665 12.2423714 13.6967594 10.6380881 9.8582558 11.1336414 1.2960168 9.3390407 0.2959581 NA 6.7717470 9.0222316 11.9584593 8.1065849 12.1965029 12.9968866 9.1415036 6.7389569 3.7554431 6.6358632 10.2882437 6.7138662 6.0773733 13.1626162 1.2960168 12.1794204 11.7603039 6.3621034 10.0239338 10.6151210 5.8351712 6.5151826 -0.7039244 12.3332069 6.1161921 7.4558845 7.5391875 NA 4.3404056 8.9488584 10.5598694 8.7513405 7.9929808 9.8380780 9.8244675 3.8195762 10.2443806 10.7000905 4.1033717 7.5005846 1.2960168 10.4802689 14.3874901 8.4224597 10.4207809 11.6880624 11.9697641 7.2675573 2.8809793 9.7306417 8.7656551 9.9955858 0.2959581 4.2029035 7.8922034 8.7858614 11.3914104 5.0773712 3.6179449 2.2960168 10.0475575 12.3016379 4.3404056 13.0600556 5.5814145 7.8996397 12.4525705 13.5573003 12.7728862 8.7180780 10.9506494 11.2729354 10.5157869 10.6408641 3.6179449 9.8438719 12.4251354 9.3431373 5.3834762 10.3533283 8.9999169 3.1033634 3.4715387 9.8573013 11.4684409 10.7863629 10.1983886 15.5071602 10.2567394 9.6224428 8.3044421 3.8809793 15.3286188 9.8342024 13.5570799 10.5575207 10.3641199 12.2366940 7.4609203 11.7576668 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.6358632 13.3857949 7.1908311 8.5767840 NA 11.8259319 2.4659484 -0.7039244 8.6469525 8.7368825 0.8809597 9.6410527 5.1539958 10.0822831 10.7451620 4.8195762 1.8809597 9.8448354 10.5860322 10.0458828 8.1024986 6.2502093 10.3594085 0.4976379 8.6623355 9.8244675 2.4659484 -0.7039244 10.6672455 6.2846973 14.3681041 13.1951815 6.2385270 9.0625424 5.5054654 10.4278703 4.9684410 1.2960168 NA 0.2959581 8.9702057 11.1629059 9.1049777 -0.7039244 9.8801115 7.2732930 10.0500658 6.1289037 9.3714927 NA 11.2900132 0.2959581 5.9107231 9.3598534 6.4902781 2.1033634 8.9125621 5.8351712 4.4252982 4.9684410 15.0741932 1.2960168 11.1919673 NA 9.1953702 4.1539917 9.0050973 9.8254440 12.840869 7.470939 8.907038 12.196503 10.246569 10.834687 13.162616 12.026908 9.332187 9.941672 13.833778 12.476700 8.765655 9.743097 7.539188 7.345862 12.772380 10.397333 6.505467 9.316993 9.991242 7.037480 9.672410 5.273292 6.141504 10.638088 5.077371 NA 10.883791 9.353937 10.060056 9.840012 7.166378 9.153994 5.755446 3.296017 8.751341 9.822513 10.870134 9.509118 10.282567 7.771747 7.622443 9.430838 7.017112 4.050902 11.391410 6.553402 10.591782 10.047557 7.662336 15.454663 10.011975 9.885664 11.886133 11.499973 9.460920 1.617957 TCGA-A2-A0CZ 46 0 NA 1616 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 2 2 NA NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 1.946798e-07 5.562279e-08 11.2512569 9.0433527 5.7625003 11.6717096 -1.0703605 10.0818955 0.5146020 9.3982347 11.4825199 8.1020382 9.7150632 7.8454901 9.7117898 9.8365012 8.0302732 8.7043979 10.0150831 9.7513847 7.8750545 4.9957016 10.4134264 10.9811595 12.4507203 10.6090908 9.6343789 10.3684026 6.9408374 10.1360146 1.5145515 1.5145515 9.1739744 13.1630057 13.4026187 8.1268273 12.7036770 11.9308429 10.4726425 6.2333915 3.8838065 7.6977947 8.5534922 10.3772105 9.3652809 12.0780872 -0.6590390 11.3264830 13.7815061 6.0588944 10.4327606 10.0137546 9.3684026 7.5662352 -1.0703605 14.7332971 11.8634857 4.7369674 9.0498485 2.5145768 5.4053457 9.3133150 9.5770691 9.5461594 10.5364785 9.1975679 10.3251448 2.2515373 10.7660556 10.2109612 6.6710782 7.3089888 11.7597297 9.4994662 15.3915377 7.1486820 10.9253778 10.8447431 8.5461594 2.3890436 7.3766941 8.4413631 8.7922479 11.4920916 NA 6.6778042 7.4334361 9.7711750 11.1234440 7.8573889 6.8365011 5.5734654 10.0875891 11.7509861 0.5146020 13.3170222 5.7240254 6.7751006 12.7020283 13.5949466 12.4058506 8.4937602 10.5521202 10.7043977 10.5580061 11.1160345 4.7875892 8.3474633 11.6029198 10.4985169 0.9296395 10.5239353 8.5070394 1.5145515 4.2875166 9.5258005 11.2560402 9.8395038 8.8499636 14.7830908 11.6035822 10.1511978 6.2515392 4.0995393 13.8473091 8.3068214 13.1958885 12.2929241 10.0276427 10.1864091 7.6643200 10.0146780 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.480357 15.201438 7.300298 10.838754 4.871420 11.241643 2.630056 1.736951 8.781360 9.674445 0.514602 8.741290 4.684499 10.028301 9.131735 3.736962 9.934533 9.656680 9.432443 9.719144 9.258252 7.224231 11.664744 3.929611 8.143930 10.325145 5.421462 NA 11.143019 3.684493 13.138759 12.606339 8.623098 10.449738 8.109520 9.610849 4.573465 1.736951 NA 1.736951 8.834998 10.058894 9.302476 6.730511 8.349213 6.186998 10.375143 5.762500 9.909036 NA 12.749391 3.321928 6.710970 9.590747 4.790824 6.027643 9.995027 8.998389 9.711790 1.736951 14.028465 1.929602 10.649000 0.514602 9.210382 5.918296 7.960278 9.537865 12.661848 4.287162 8.587822 12.703677 10.598939 9.811489 12.078087 13.000654 9.119435 10.287163 13.051792 11.213567 8.792248 8.610849 NA 8.466829 10.636107 11.561924 6.429457 8.764082 9.076816 6.768814 10.274495 7.584247 8.417451 10.609091 6.895395 3.630056 7.623098 5.137504 12.222795 10.691577 8.728892 8.848474 10.343239 7.330490 9.546159 10.516450 10.778234 10.431945 10.653698 8.360063 NA 9.402251 7.787343 8.217323 11.123444 8.682827 10.795730 10.087589 6.974005 14.906846 10.224231 10.303563 12.567028 10.665167 9.467800 1.929602 TCGA-A2-A0D0 60 0 NA 643 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 47.68.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.561063e-06 4.509738e-07 11.0936405 -1.2796340 4.4751173 11.3261740 -1.2796340 7.4917208 NA 7.5178930 10.7666735 7.5750998 9.7419056 6.0952704 8.7849744 10.6457860 8.3294102 8.6494901 9.1652464 11.3786662 8.0511486 5.4751206 10.0268630 10.6645776 11.7284851 9.6561333 9.7687185 10.7223433 6.2976610 10.9963531 6.5782127 NA 6.4616988 9.3694879 13.2840237 3.2437909 11.2993118 10.8235194 9.5507468 6.3855674 1.3052118 8.1590236 8.2300065 7.1168367 7.3126888 5.5015920 NA 12.4836514 9.1285612 7.3349418 10.0217278 10.3966295 7.2862861 5.1296210 2.8901548 13.7537303 13.1568130 NA 7.7453711 NA 1.3052118 8.4171989 10.4867605 9.1443980 7.8976513 8.3089460 9.8970280 3.4751238 10.9469448 10.0556219 5.3349401 6.2593911 -1.2796340 5.2280260 14.3349127 6.4583918 10.1719579 10.6531845 9.9734882 6.1380834 -0.2798091 8.8687081 8.9986810 12.1417705 NA 3.1125500 8.0843662 12.3614931 10.6383494 3.2437909 5.3201453 4.3926540 9.4900695 12.3595723 2.1796703 13.2442835 3.9681553 6.9681587 11.0639725 11.9351578 12.5841274 7.2976601 10.5279890 10.5475743 9.4958418 10.7138777 3.6271165 8.8597829 11.8259764 8.8103441 NA 10.7819403 10.0427231 -1.2796340 3.0421540 8.8964048 8.3220025 10.2757794 9.9496512 15.3956787 10.3833449 9.1221778 6.1796623 0.3052118 10.7526217 6.8951572 9.2593904 13.7582503 10.4490024 10.2235605 7.8572228 10.6417006 0.381380 1.508400 1.860800 -0.303340 1.753900 -0.014916 3.375900 1.088300 1.021800 0.250740 0.250740 2.824200 0.240930 -0.270090 -0.274640 -0.312130 0.880260 1.475500 0.359040 0.313060 -0.224040 0.260280 -0.302980 -0.302980 -0.288340 0.083198 0.083198 0.171510 3.030100 -0.291300 0.381380 -0.443010 -0.269570 -0.181240 -0.925850 -0.903050 -0.889740 -0.556770 0.000000 1.469400 -0.952540 0.998230 -0.445450 0.308730 -0.234470 -0.253940 0.181090 -0.270090 -0.351040 -0.274640 0.385670 0.356590 0.289450 0.961030 -0.235450 -1.292900 -0.325650 -0.323010 -0.302980 -0.302980 -0.322750 -0.155030 0.181770 -0.286320 -0.248000 -0.390560 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 -0.040 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.169 0.169 0.332 0.332 0.991 0.991 -0.248 -0.377 0.845 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 -0.040 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.169 0.169 0.332 0.332 0.991 0.991 -0.248 -0.377 0.845 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 7.2000119 11.8449991 -1.2796340 8.4154600 0.3195023 12.2160866 -0.2798091 3.0421540 9.5404105 8.5211316 NA 7.8520888 6.2824732 11.0547842 9.4404757 6.0148529 3.4751238 10.4579014 9.7970472 8.9381893 8.5920137 5.7646248 11.0797066 2.3051826 8.4258638 9.8970280 5.0240138 NA 10.6017280 NA 14.7822566 13.7017097 5.8699775 8.4867606 10.2065639 11.0182942 4.0056335 0.7201909 NA 2.0421540 9.0909190 9.9675658 6.1631747 -0.2798091 8.7647625 5.6975125 9.8520886 2.1796703 9.0410321 1.3052118 12.4004812 -1.2796340 3.9681553 10.1028069 7.4146937 1.0421540 8.2240572 7.0600820 4.4206710 4.3349401 14.7523204 NA 11.2938788 NA 11.9962106 5.9776188 7.9846742 7.7370398 11.639099 9.696080 7.902626 11.299312 10.012553 12.400811 5.501592 10.697154 8.972897 10.085460 13.428992 11.746236 8.998681 9.082175 2.305183 7.055622 11.522950 11.1491151 4.6271224 8.0799812 9.9574415 8.9149884 10.2598993 5.9199049 5.4067305 9.6561333 10.5435988 NA 10.5531216 8.6807115 10.6089748 10.1023151 7.6831273 9.7474465 5.2280260 5.0600820 9.1443980 9.9229676 12.1603221 10.1842668 11.2841428 8.5048662 NA 9.2937273 5.7314575 3.8901548 10.6383494 3.8076949 11.0205842 9.4900695 7.4313823 15.2409423 10.7656499 11.1290920 11.8813635 11.6231719 9.1422963 -0.2798091 TCGA-A2-A0D1 76 0 NA 1051 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 6 3 4 NA 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.006018e-06 5.203543e-07 12.03944516 -1.08650737 6.38099086 10.48371614 0.49835300 8.49081478 NA 10.58934310 12.18543258 7.02712861 9.29059650 8.06059110 9.19878830 9.81425288 3.08331550 9.68817319 10.56309128 10.44281663 6.75258938 1.23529817 11.44914741 9.95709696 14.32085300 6.94129180 9.35632959 10.84744546 4.64130903 9.42316109 NA 2.08331550 5.77136797 9.48039136 12.94008238 5.57159794 16.38862075 10.62376199 8.01667404 5.54274403 -0.08666057 4.79602663 8.99153687 4.84412449 8.57516406 13.14002402 -0.08666057 9.21373853 13.54291344 5.27093628 9.50864356 11.71630624 6.86175318 5.66827233 0.49835300 12.63502571 7.20340478 3.72073813 10.44037421 NA 4.33965051 9.49834861 9.78066476 8.69638442 8.90632453 8.47180688 10.26266723 -1.08650737 11.37920750 9.89851644 5.66827233 5.45254602 15.67089326 8.88780062 15.22584362 6.09756655 9.76981157 9.80896128 11.19009207 -0.08666057 1.72076001 7.59638061 7.42908615 11.55498626 0.49835300 6.38911934 6.62763164 9.23756659 11.17077390 5.77136797 3.49835300 4.16131533 9.17077384 11.97391311 1.72076001 12.79191600 4.64130903 7.16605158 10.75219605 13.95713963 12.60654628 6.39720228 11.26239076 11.18368140 10.01141820 11.29870923 3.91338731 7.96323481 11.84116403 12.25643292 NA 10.23136388 10.51608490 0.49835300 4.27199332 10.53955133 9.10567886 8.64809581 8.82777108 14.55935402 10.06186258 9.88061237 6.86175318 1.23529817 15.77981982 6.26211364 12.75377061 10.21545376 10.02712820 9.66073987 7.48324181 10.38838986 0.0045026 0.0070798 0.0079865 0.0274260 0.0181730 0.0075690 -0.0007629 0.0494680 0.0494680 2.2148000 2.9890000 2.0013000 0.0000000 0.0000000 -0.8129800 0.0127240 0.0127240 0.0106330 -0.7887900 -0.8053000 0.0163550 -0.0018712 -0.8057100 3.6569000 -0.7605100 0.7494600 -0.7932300 0.0285510 -0.0029789 0.0204120 0.0045026 -0.0069891 -0.8093500 0.0202720 -0.0100670 -0.3872200 -0.3872200 0.0494680 0.0494680 0.0494680 -0.8297200 0.0317880 -0.8244400 -0.0323830 -0.0323830 -0.0323830 -0.8102600 0.0000000 0.0039543 -0.8129800 0.0127240 0.0106330 -0.7999900 -0.8353900 -0.8053000 0.0163550 -0.0018712 -1.2721000 -0.8057100 -0.7750900 0.0291140 0.7494600 -0.7947500 -0.0029789 0.0188720 0.0134220 0.000 0.000 -0.813 0.000 -0.789 -0.789 -0.805 0.000 0.000 0.000 -0.399 -0.761 -0.761 -0.820 0.000 0.697 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.807 0.000 0.000 -0.162 0.000 0.000 -0.813 0.000 -0.789 -0.789 -0.805 0.000 0.000 0.000 -0.399 -0.761 -0.761 -0.820 0.000 0.697 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.807 0.000 0.000 -0.162 7.53909521 13.61588344 3.16130726 8.70780188 3.48990254 12.85177110 1.91337773 -0.08666057 8.84707677 10.25823671 NA 6.91901108 4.69474650 10.76786489 9.99885850 4.97947664 4.16131533 9.10321069 11.79545588 10.57471878 9.37229505 7.11795680 11.33965078 NA 6.21716672 10.26266723 1.49835300 NA 11.84541623 3.23531349 13.69418210 13.39221886 7.52809618 10.20282859 7.59286587 9.26873708 3.16130726 1.49835300 -0.08666057 NA 9.57872195 10.94955966 11.27615180 -1.08650737 10.00571380 7.94129180 9.78606097 6.82627518 9.12405745 NA 11.34017496 2.82028110 4.27094001 9.48830110 6.39720228 3.37281283 7.98216421 6.04266841 7.45641767 3.37281283 13.53549508 -0.08666057 10.64724875 NA 9.14940012 3.95778462 7.65485295 5.48324181 12.175499 6.083311 9.284073 16.388621 8.864671 10.518402 13.140024 7.360470 9.479440 10.348014 11.987695 7.078293 7.429086 6.032328 0.913416 6.984848 11.152686 10.980148 8.055493 8.403234 11.052937 8.090806 10.151044 4.641309 6.542742 6.941292 4.668272 -1.086507 9.869762 7.406081 12.500460 9.276426 6.739934 9.758092 6.613826 5.042671 8.696384 10.240377 11.280255 9.433022 10.001512 8.707802 11.339126 9.226292 8.144607 6.217167 11.170774 6.170774 11.340437 9.170774 7.413232 14.994557 10.276426 9.998858 11.062498 12.554986 8.507711 1.913378 TCGA-A2-A0D2 45 0 NA 1027 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.046727e-06 4.509738e-07 12.7419136 4.9216553 7.1071365 12.0398382 NA 9.3985759 -0.4359633 8.9488884 10.9372418 7.2294408 8.9903695 8.3601443 8.3794880 10.6163332 9.1705100 7.9777327 8.5110110 11.1856988 8.2294408 5.5753335 9.8713056 11.9711069 12.8660296 9.8126253 9.4390862 10.8992159 6.8860331 9.8678627 0.5641342 1.7340484 7.4859460 11.3264868 12.1081032 7.8355679 11.7373134 10.6146337 10.2641109 6.3256562 0.5641342 6.3454638 8.6301939 10.2457824 9.6862857 6.4033086 NA 11.9795825 10.3122976 7.8402291 9.5857441 9.9887960 8.3714595 4.7340321 0.1491293 13.7659744 10.2245420 1.3714473 8.8927796 NA 4.3969952 9.4520870 9.4329273 9.2007294 9.4313835 9.1481278 10.5417425 0.8860428 10.8355678 10.6585124 3.8860331 5.7239762 1.5640855 8.7377821 15.6267412 8.4355328 10.4863175 10.4944725 9.7081257 0.5641342 NA 8.7686759 8.9872208 11.1382252 NA 4.1186920 6.2079612 11.0214856 8.9072906 5.8120335 6.2079612 4.5413847 9.0539528 12.4608156 1.7340484 13.6085416 4.5641037 6.8724434 10.7594769 11.4900300 12.3026193 6.2079612 11.2258828 11.5683252 10.9163938 10.5172099 4.3454673 8.7163898 12.0082137 7.0915814 3.9564191 10.8480612 9.8506626 -0.4359633 3.5196929 9.2988143 9.3511910 10.7343428 8.9734956 14.4645942 10.6885492 9.3577081 4.4467459 -1.4359633 12.3581144 4.9903695 12.6128471 12.1595954 9.9342473 9.4390862 7.5066194 9.6271897 0.642680 0.581480 1.094100 -0.011060 0.601600 -0.033132 0.535030 0.564360 0.615520 0.450030 0.450030 0.581120 1.122100 -0.061555 2.777300 0.592420 -0.025620 0.532220 -0.017565 1.130500 -0.041567 0.568450 -0.077745 -0.077745 0.121670 0.525900 0.525900 0.772720 0.692230 -0.085457 0.632440 -0.054420 -0.027671 -0.089567 -0.036401 -0.031496 -0.018904 0.564360 0.615520 -0.072007 -0.063435 0.975230 -0.072541 -0.049289 -0.041024 -0.041024 -0.080674 -0.020824 -0.135490 -0.060211 0.575050 -0.030221 -0.035857 -0.039529 -0.041838 -0.049154 0.506370 1.418600 -0.077745 0.121670 1.156900 -0.057654 0.567920 0.361490 0.587930 0.466390 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.530 0.530 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.530 0.530 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 8.2558481 13.9369698 1.3714473 10.3189923 3.5641098 11.9668504 2.7340267 3.7340267 10.9072904 8.2025407 1.8860428 7.3223284 1.3714473 10.7433919 9.6908092 2.2645364 8.2025407 10.4367796 7.6752401 9.3322890 8.2636424 7.3842838 12.8210505 2.4710053 8.3568952 10.5417425 2.7340267 NA 10.6359023 2.0235392 13.5803907 12.1234818 7.2294408 9.6429226 8.9391443 10.7205039 1.1490642 2.9564284 NA NA 8.9006114 9.4205302 6.1339601 4.1490642 7.6391294 2.8120258 10.0357799 7.0438847 9.7643904 6.4649721 12.0086021 2.2645364 3.3189964 10.8834777 7.2529492 5.9903695 9.0619565 8.5284455 8.1695843 4.9903695 13.2323804 -0.4359633 12.0582103 NA 9.9089555 3.4220850 7.9194557 6.7539294 11.431190 8.813218 7.572533 11.737313 10.206608 11.631707 6.403309 10.854124 8.519755 10.880103 12.809732 11.365005 8.987221 8.458922 1.564085 7.923855 10.734969 10.834984 6.352008 8.702377 9.187072 6.318993 9.376090 7.071900 5.458923 9.812625 9.718290 -1.435963 9.493363 11.427176 12.032474 10.126824 7.990369 9.043885 7.928239 7.122526 9.200729 9.652230 10.646587 10.334769 10.535648 9.300507 -1.435963 9.959842 6.843715 8.093535 8.907291 6.031711 10.264111 9.053953 8.078030 14.818266 10.280496 10.037810 12.595289 11.034764 8.654217 1.564085 TCGA-A2-A0D3 42 0 NA 875 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 5 2 2 NA 2 1 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.946798e-07 10.6241270 4.7068841 7.4304291 11.3199571 -0.6330764 11.0088598 NA 9.6996299 12.2858971 8.3698490 9.7995758 8.2420151 8.5014602 8.3810545 8.0234589 9.8573834 10.4528383 8.3642135 6.4059532 0.6889412 10.4202810 9.6501223 13.2112002 10.9805932 9.1614496 10.3603261 5.9292773 10.6625073 -1.6330764 2.5369481 7.0605209 11.0589954 12.4196019 6.1352188 13.3740611 13.4630489 8.7817190 8.0234589 5.8905950 4.7593529 8.0018450 11.0650874 6.2125246 13.1896047 2.0674666 9.9148925 14.4549317 3.6149571 9.7792226 11.2675233 7.9042523 5.7333571 -1.6330764 13.5041551 10.3208665 2.2739336 9.0438724 -0.6330764 3.3670355 9.5970544 10.9973010 10.6297160 11.7896243 10.7614965 9.6454834 4.1999236 11.2162435 10.1852166 8.1068147 9.5789221 -1.6330764 12.1502368 15.0934383 8.1766733 11.6871292 11.3197751 8.0674736 1.3670355 4.3670355 8.9706601 8.7366313 11.0576867 NA 5.1743904 7.3754626 8.4872717 10.8901057 12.7115378 5.8905950 3.4963217 10.3099149 11.9995747 2.1743745 13.4078373 6.5419593 7.8886343 13.5149145 12.4001127 13.0104955 7.0429912 10.0653045 11.1782078 10.9441913 11.3371398 5.1872135 8.4451846 12.2164390 10.5309979 NA 9.9701965 9.9425732 0.9519607 4.0414357 10.1735835 11.8067349 10.6084213 9.2504408 15.1493411 10.1553443 10.6527251 8.8777979 1.1744064 15.8740077 10.7593513 13.6289084 11.5498938 10.3624478 9.8538689 8.3571381 11.4554064 1.12340000 1.65410000 1.65410000 0.00110930 0.00110930 -0.03558500 -0.00235530 -0.00526100 -0.00526100 0.62087000 0.60100000 0.60100000 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00290910 -0.00235530 -0.00235530 0.00291330 0.00166420 0.00055459 -0.00415460 -0.00415460 -0.00415460 -0.00443120 -0.00443120 -0.00443120 0.00138680 0.00000000 -0.00622860 -0.00193990 0.00110930 -0.03558500 -0.04140200 -0.00235530 -0.00235530 -0.00526100 -0.00526100 -0.06037400 0.02034300 0.01788100 0.64030000 0.00152550 -0.00100150 -0.00413860 0.00249690 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00235530 -0.00235530 -0.00235530 -0.00139800 0.00166420 0.00055459 -0.68468000 -0.00415460 -0.00415460 0.00958830 -0.00443120 -0.00443120 0.00138680 0.00268770 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 8.2588176 11.1436726 7.7743015 8.7838315 4.5167779 10.6414120 2.8264570 -0.6330764 8.3241360 5.4650668 NA 6.9594908 1.1744064 10.4418444 9.3789600 -0.0479647 8.4505131 9.1343906 9.1999238 10.9648537 9.7212446 7.4331230 9.4872717 1.8264773 9.2085982 9.6454834 9.9701965 -0.6330764 10.1646954 2.6889636 13.1491619 11.9711237 6.5014598 10.2851517 7.2648798 9.2881310 2.0674666 2.3670355 -0.0479647 6.6934633 8.6878344 9.4243488 10.5278507 3.0674666 7.7102637 6.5519097 10.6748039 6.5862018 9.0622621 NA 9.8503458 2.2739336 3.7245848 10.2210334 6.1951074 5.3443137 7.7507385 7.0983532 6.3036712 -1.6330764 14.2829133 -0.0479647 9.8528631 -0.6330764 8.8777979 4.9669472 7.5862025 8.7135477 11.523100 3.411426 9.231220 13.374061 10.619995 11.743295 13.189605 12.350651 9.750738 10.766846 13.747799 10.653592 8.736631 8.786994 -1.633076 7.218783 11.903524 11.2601458 7.0000293 9.6460640 8.9632235 7.6196991 10.3420793 6.4059532 7.9799024 10.9805932 4.6338206 1.8264773 5.2496767 4.8874570 11.6052893 10.7146553 9.2556553 7.6912145 12.2920319 5.9890868 10.6297160 10.5428953 11.0341454 9.2799232 11.1013201 9.5916385 1.1744064 9.5733461 6.0940017 6.8182447 10.8901057 5.5862033 10.4932543 10.3099149 7.8182447 14.2278056 9.9548114 10.5094601 13.3270811 11.0352540 10.0889875 0.3670355 TCGA-A2-A0D4 37 0 NA 767 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 black or african american not hispanic or latino 47.68.0 3 1 1 NA 2 4 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.112456e-07 11.71414749 6.90140877 6.67580041 12.41712653 -1.90941752 9.15355836 6.69075091 9.76679457 12.09224570 10.12563651 10.69770537 7.11597687 9.42007327 9.82597034 7.81535127 9.54924406 10.62902642 9.01639185 5.88525221 2.73469878 10.48824476 8.62026822 14.23889695 10.83356802 8.86891451 10.68422860 2.17830033 10.35586355 0.09085343 4.06812045 7.98868298 10.59366927 12.59248813 5.30029215 13.29146796 13.35560996 8.87465436 5.37623828 2.89818900 5.93004184 8.43291224 8.50657933 5.93004184 13.03810917 2.26074833 10.13420656 13.46933558 0.67581593 9.56806461 11.46940332 7.80508282 5.87874005 1.67581593 11.80082594 6.95811651 1.41278153 8.36812489 NA 3.58268846 9.45223300 9.86191428 9.71105725 10.12219410 9.45113588 9.98110172 1.41278153 10.42427244 10.17232099 6.70186229 6.78780464 5.69074951 10.47508164 14.26825704 8.29463821 10.90401745 10.67603481 6.39004511 0.09085343 6.93946050 4.74905150 8.77207600 11.00148026 -0.32427438 4.87219837 7.63773195 11.39433289 9.93436611 7.05662146 2.94882508 3.84572086 7.60653698 12.22357821 3.70554669 12.88672498 5.83230522 8.12288337 11.39104705 11.16497900 12.89355580 8.35410654 10.16028731 11.09206978 10.44430419 10.96601091 4.72019637 9.02600243 11.18475022 9.88687704 0.09085343 10.16765310 9.77031767 -0.32427438 2.41348577 9.67344989 10.17763717 9.77383203 9.21172334 15.73834512 10.25700060 11.04029952 8.84488995 0.89816965 15.74236575 8.13796147 10.16698502 10.35058078 10.35116904 9.26263986 7.90941971 9.74394676 -0.314970 0.417700 0.417700 -0.798920 0.058128 0.032186 0.089753 -0.340750 -0.390480 0.714780 1.831000 2.980200 -0.267890 -0.718770 0.069936 1.072300 -0.803670 -0.760690 0.071725 -0.807460 0.882120 0.101700 -0.738510 0.148950 1.010100 -0.711910 0.099044 0.175030 0.137810 -0.314970 -0.314970 0.086243 -0.776400 0.073880 0.051718 0.000000 0.000000 -0.340750 -0.390480 -0.346950 -0.329550 -0.340400 -0.822650 0.039640 0.039640 0.081369 0.173970 -0.718770 -0.718770 0.971170 -0.803670 -0.760690 0.071725 0.148650 -0.809530 -0.763440 -0.778200 -0.748810 -0.739960 0.148950 0.076613 -0.701960 0.175030 0.137810 0.088305 -0.338330 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.980 0.000 0.000 -0.149 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.980 0.000 0.000 -0.149 7.30029124 11.06578979 3.30028483 9.21301841 2.16979676 12.02600257 0.89816965 NA 8.76326284 6.48315473 -1.90941752 7.01731175 1.89820835 11.42776240 8.83483034 1.41278153 6.11874386 9.05517830 7.04503335 10.43513340 9.25254268 7.67203774 11.00653016 1.55026042 8.45497205 9.98110172 4.19935825 0.09085343 10.77405144 -1.90941752 11.60345453 12.17979134 6.56657164 10.31845344 6.69446376 9.95231216 0.67581593 2.89818900 0.09085343 2.61440361 8.14340566 9.60456509 9.64110325 3.84572086 7.12147757 7.13523113 10.04939022 5.43068671 10.23390184 0.09085343 8.91818018 5.25070772 3.94881574 10.04586612 6.53427798 0.67581593 9.33935811 8.51815034 5.50022843 -1.90941752 13.80990541 -0.90914657 10.47400177 NA 8.44067154 5.19936218 8.32565490 6.24565538 14.94607258 5.64542499 8.71197355 13.29146796 9.96735452 10.50789888 13.03810917 13.37858595 8.59962279 9.64877981 12.17738842 10.49651088 8.77207600 10.40230201 0.09085343 8.22654658 11.52285734 11.000543 6.156926 8.502349 5.566572 9.906621 10.763870 3.517099 5.483155 10.833568 7.677677 3.948816 6.862327 7.482597 9.408815 9.973481 7.487442 10.846768 12.086340 2.338767 9.711057 9.934759 11.737284 8.779088 10.928860 8.783453 2.178300 8.661907 5.227622 3.135239 9.934366 3.997726 11.301661 7.606537 7.759722 13.004335 10.597641 9.696317 12.059324 9.231028 9.944537 3.090836 TCGA-A2-A0EM 73 0 NA 3094 breast stage ia t1 n0 (i-) m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 5 5 2 NA NA NA 1 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 0 10.97777383 6.17168922 7.18583286 11.53287612 -1.49370273 10.62496932 NA 9.85729182 11.87048733 9.14750132 9.59182507 7.79867397 9.54046382 8.56704874 8.82150232 9.05998197 10.03236275 9.48577780 6.65610018 1.67626741 9.74176864 9.68750499 13.29451020 10.80183460 9.51897726 10.49645666 4.02991221 11.02229145 -0.49370273 2.20679949 7.50635281 10.82912587 11.57479506 6.91574317 12.79608340 12.76300365 8.99820566 6.12106308 4.61487471 6.12106308 7.63047391 10.36511072 8.14840438 13.36399355 3.31371023 11.25202702 13.81330437 6.96168004 9.28607208 10.33448917 8.17700885 4.61487471 NA 14.65512038 8.68750481 2.75428893 8.38286953 NA 3.55075294 9.78538282 10.57412308 11.71626289 11.80941987 10.18978602 9.82433047 2.59380790 11.10487049 9.69246695 6.14297701 8.04162794 7.14659719 11.55194171 14.90145162 6.51113434 11.64654337 11.76447699 8.71458692 4.61487471 -1.49370273 8.31048373 8.52455268 10.86582775 -0.49370273 6.33924252 7.18583286 9.11368305 11.28401897 6.65101150 4.69617748 4.15021033 10.61422359 11.72627743 NA 13.59111954 6.28113998 7.23427329 12.68252581 12.96296377 12.81838473 8.85508088 10.61814044 11.70525806 11.35863247 11.16277751 5.16456506 8.34870293 12.19318143 11.06118134 1.96576582 10.05035109 8.89759621 0.09125977 2.76336908 10.21500545 11.03529509 10.10673017 8.89759621 14.62287939 10.18230968 10.04016901 7.77313921 2.09132748 15.46746317 8.47501961 12.01451884 11.63402461 10.35810171 9.64462440 8.16813054 11.21366004 -0.00995650 1.19450000 1.19450000 0.00194180 0.00089236 0.00903120 0.00346870 0.00013863 0.00013863 0.00000000 0.00000000 0.00000000 0.00138680 0.00138680 -0.00317950 -0.00317950 -0.00193990 -0.00456950 -0.00456950 0.00305220 -0.00221680 -0.01271300 -0.01711600 -0.01711600 -0.01711600 -0.02109800 -0.02109800 -0.02109800 -0.01550400 -0.00995650 -0.00995650 -0.00360110 0.00194180 0.01042400 -0.68177000 0.00346870 0.00346870 0.00013863 0.00013863 0.00013863 0.00108800 0.00513590 0.00000000 -0.00360110 -0.00360110 -0.00360110 -0.00360110 0.00138680 0.00138680 -0.00317950 -0.00193990 -0.00456950 -0.00456950 -0.00597170 0.00305220 -0.00221680 -0.01271300 -0.69242000 -0.01711600 -0.01711600 0.61788000 -0.02109800 -0.02109800 -0.00954260 -0.00802440 -0.01519100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.611 -0.692 0.000 0.000 0.618 0.618 0.000 0.000 0.000 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.611 -0.692 0.000 0.000 0.618 0.618 0.000 0.000 0.000 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.89759621 13.53559675 3.41324203 9.65927133 1.82826599 9.93209307 -1.49370273 -1.49370273 8.70479763 8.22059840 NA 6.91998119 0.82830661 10.30846509 8.78944105 1.09132748 6.65101150 9.36511072 12.21468218 9.76432973 9.69689956 7.00220744 10.88951689 2.73593370 9.44813386 9.82433047 2.67626741 NA 10.31692432 2.59380790 12.83929830 11.99808053 8.54389950 10.60207935 7.19635032 9.25286692 4.28770869 0.09125977 -1.49370273 2.41324203 9.71153500 9.85563393 10.88356316 3.82827614 6.72067247 5.63563542 10.58949957 6.65101150 9.53356763 NA 11.61976926 0.82830661 4.91574556 9.91601408 6.70597652 1.96576582 9.27288168 7.90081550 4.59381388 NA 13.91209247 0.09125977 10.16367106 NA 9.25202696 5.15021033 7.86610248 9.29751564 13.198916 5.121061 8.203320 12.796083 9.780294 11.202233 13.363994 13.153811 9.492195 10.848149 13.536502 9.815829 8.524553 9.950850 -1.493703 7.139348 11.409670 10.891676 8.059022 9.160989 9.301581 8.189225 10.233912 6.171689 6.604384 10.801835 6.234273 3.460546 10.316523 5.446402 11.868844 10.230014 7.511977 8.523161 13.821821 4.029912 11.716263 10.368603 11.414558 9.142977 10.533568 9.503532 NA 9.389149 6.178071 2.965784 11.284019 7.874859 9.975399 10.614224 7.317117 14.109573 10.310484 10.484706 12.668665 9.944105 9.633702 1.965766 TCGA-A2-A0EN 70 0 NA 2718 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2003 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 72.63.0 8 2 2 5 NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 10.8669104 8.1192752 6.7853034 11.1581554 0.4016305 9.9790278 -0.5983695 10.1434873 11.2472851 7.7722862 9.8869252 7.7722862 9.1992606 8.9686043 6.9714550 9.3463112 9.4750713 10.0495072 8.1531431 6.3084901 10.1984498 10.4033591 8.8712409 10.2692639 9.3824526 10.2773484 8.0454550 9.8109899 1.4015759 5.4568817 9.7019517 11.6533773 12.0360698 7.3644954 12.7554351 12.5955864 9.8199788 5.5815079 3.1020366 6.9561879 9.0810791 8.6973679 7.7436738 12.5454606 -1.5985880 11.3420962 13.0351620 5.8773320 9.2880272 10.0797590 10.2470891 4.4890612 NA 14.8854652 10.1216852 4.1295221 8.3673833 NA 5.4996323 9.9460806 10.1489529 9.4589139 11.8160200 10.2914833 10.0149281 2.4016032 11.5597353 10.0553398 5.2089542 8.6411977 1.7235149 10.8737822 15.0184637 8.1421556 10.6988020 10.9968565 8.4903872 2.8610224 3.9251639 9.0172288 9.3881523 11.9696739 -1.5985880 5.7679222 7.3817385 9.7613486 10.9860918 6.6589869 7.8994512 5.0163091 10.4436003 11.5701145 0.4016305 13.8279621 5.1564856 7.6846876 12.4097650 13.3057162 12.7163239 8.4253536 10.0535477 10.6289142 10.1459241 10.8658895 4.3084919 8.4281227 11.1962180 10.3349208 -0.5983695 10.6256007 8.9761926 0.9865930 3.5050906 9.5808862 10.6349191 10.1184185 8.9426957 15.6381085 10.1697834 9.9499393 8.5914236 2.5715312 14.7746851 7.7414488 13.0325487 12.1813184 9.6286132 9.0472575 8.2073429 10.1078101 -0.3983100 0.4361400 0.4361400 -0.0031859 -0.0031859 -0.0252770 0.4178100 0.0000000 0.0000000 0.0040580 0.0040580 0.0040580 0.0196430 0.0163530 0.0157270 0.0157270 0.0157270 0.0369350 0.0055529 -0.0020784 0.0147490 -0.4010900 0.0605080 0.0605080 0.0605080 0.0665150 0.0665150 0.0665150 0.0464170 -0.3522500 -0.3983100 -0.0110600 -0.0031859 0.0367940 -0.0337410 0.4178100 0.4178100 0.0000000 0.0000000 0.0000000 0.0132130 0.0196430 0.0040580 0.0322810 0.0322810 0.0322810 0.0322810 0.0163530 0.0163530 0.0175440 -0.0102940 -0.4127800 0.0143300 0.0143300 -0.0126820 0.0147490 -0.3832500 -0.3852600 -0.3757200 0.0605080 -0.4103600 0.0665150 0.0665150 0.0464170 0.0260920 -0.3506500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.860006 13.482541 5.994057 10.484746 5.330444 10.783142 3.102037 NA 8.516643 8.347043 NA 8.464063 5.156486 10.095086 9.510123 1.401576 10.007541 9.638809 10.024109 9.958105 9.569494 7.553884 12.007427 3.723526 8.696220 10.014928 5.401600 NA 10.803812 3.102037 13.274130 11.747697 8.738106 10.330117 8.565249 9.357975 3.445991 2.723537 2.489055 7.842469 8.489062 9.597586 9.557682 6.561470 7.290646 7.256467 9.851264 6.284242 9.230529 NA 11.604947 4.510126 4.971456 9.811202 6.092087 5.169785 10.440861 9.557050 7.008929 -1.598588 13.743882 2.208954 10.423967 NA 9.412826 5.932980 7.752539 9.684108 11.9490973 4.7766409 8.4267386 12.7554351 10.4666785 10.8775858 12.5454606 11.1802922 8.9837410 10.6560372 13.4934889 9.8466140 9.3881523 8.3888633 0.7235149 7.3024662 10.8806214 11.287105 5.909394 8.894454 8.410028 7.615918 10.066797 8.538590 7.838311 10.269264 7.881380 5.115845 5.658988 6.721497 10.948494 11.245520 7.875305 8.636417 12.305481 7.376013 9.458914 10.861543 11.132069 10.664575 10.840911 8.766828 NA 9.956835 7.983308 7.483748 10.986092 7.299444 10.964795 10.443600 7.049058 13.684289 9.823664 10.707376 13.401071 10.486407 9.847648 2.102053 TCGA-A2-A0EO 54 0 NA 2442 breast stage ia t1 n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 2 2 1 NA 2 1 3 3 2 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 11.2887469 7.4426101 6.7686965 11.2418686 1.8426973 10.3457281 NA 9.7006785 11.5962486 10.2465618 9.3029487 7.0981985 8.9480822 9.1113564 6.0521507 8.3536594 9.6029185 10.1587527 7.5651638 2.2211965 9.5249898 10.6032512 13.6256957 11.8343611 9.8589487 10.6711514 5.3021289 10.0652509 0.1056781 0.5207491 8.5389695 12.9975156 12.4332846 7.7663222 13.6135266 13.6557171 10.1178908 7.8199772 5.2889528 7.3725186 8.4807712 10.6178139 8.5514364 12.2693816 1.8426973 10.8452313 13.0461679 5.3281256 8.5610592 10.8373338 7.0126223 6.8426973 NA 13.1769814 9.7000566 2.7686925 8.2706387 2.4276598 4.7686978 9.6736880 10.3058131 9.0384389 11.5440040 9.4314121 9.9454607 1.5207491 11.1331772 9.7375152 4.7105916 7.4336589 1.1057451 11.3186336 15.4438648 7.5057862 10.8205498 11.3391519 8.9141600 2.2211965 -1.4791503 8.2988466 9.0482465 11.9915554 0.1056781 5.3409467 6.9087865 9.9949824 11.3530661 9.3029487 6.3086721 5.6082326 10.5504017 11.8757075 1.9802081 13.4988989 6.6240570 7.2689621 13.6902639 12.9267086 12.4400983 7.6654276 10.1455649 11.2452833 11.1796503 10.9157680 4.7302215 8.5277968 12.1443080 12.1286776 -1.4791503 10.4171019 8.9883751 1.1057451 2.6947019 9.4544601 10.9216489 10.1108886 9.2203418 15.4271199 10.1192873 10.1887680 6.6654283 4.5431370 15.9342156 8.4735105 14.0268290 12.9544853 9.6660647 9.6351625 8.3615473 10.3794421 -0.2892400 0.5234100 0.5203800 -0.3013800 -0.2977500 0.0054379 0.5701300 -0.6210800 -0.6210800 0.3653300 0.3653300 0.3653300 0.0026920 0.0040807 0.2118300 0.2118300 0.2118300 0.0000000 0.0000000 -0.1598300 0.0779210 -0.2958600 -0.6237400 0.0135490 0.0096449 -0.2033100 -0.2033100 -0.2033100 0.0555730 -0.2892400 -0.2892400 -0.2847800 -0.3013800 0.0184400 0.0054379 0.0047753 0.0047753 -0.6210800 -0.6210800 -0.6210800 0.0093098 0.0129910 0.3629400 -0.3072700 -0.3072700 -0.3072700 -0.2930300 0.0040807 0.0040807 0.2118300 0.2118300 0.0000000 0.0000000 0.0044974 -0.1598300 0.0779210 -0.3029400 -0.6482100 -0.6237400 0.8829400 -0.0034066 -0.2033100 -0.2033100 0.0555730 -0.0097625 -0.1521600 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 -0.289 0.231 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 -0.289 0.231 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 9.0156250 14.1295729 9.1280998 10.1736144 3.7169031 9.9365112 1.1057451 1.6906853 9.0226067 9.3168090 -1.4791503 9.1083969 2.7686925 9.7793354 8.9195132 1.3281471 9.3086719 9.5576299 11.0528818 10.0211134 9.6175834 6.7922320 10.9488679 4.1646254 9.9704339 9.9454607 5.7875552 NA 10.8090587 3.5651585 13.4928069 12.1230043 8.6944467 10.2474133 8.1317942 9.1519466 4.0126223 1.3281471 -1.4791503 4.7495879 8.6069056 9.8455125 9.4522458 5.5868578 5.1649150 5.7204426 9.9407297 7.0638017 9.6435974 -1.4791503 10.6903813 1.1057451 4.1931961 10.1921822 6.2627075 5.4749649 9.6558373 7.6161665 7.8176859 0.8426973 14.2851227 -0.4791503 10.4011182 NA 8.8130911 5.0443329 8.1555803 8.7663222 14.402838 4.520768 8.545909 13.613527 10.099614 10.528147 12.269382 12.235230 9.497548 10.816825 13.767733 11.454091 9.048247 8.704405 NA 7.318431 10.666702 10.897437 7.688187 8.905553 9.241014 7.629294 10.124150 6.735089 6.754389 11.834361 6.186106 3.378747 7.359974 5.568111 12.861176 10.184772 8.586415 8.594911 12.050688 6.052151 9.038439 10.643274 10.896080 9.019619 10.504832 9.234156 NA 9.695758 7.936025 6.913087 11.353066 7.880519 10.182993 10.550402 6.996503 14.441471 9.847761 10.899335 12.807760 10.461817 9.170924 2.328118 TCGA-A2-A0EP 56 0 NA 3273 breast stage i t1 n0 (i+) m0 2-10-2014 female 2004 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 234.26.0 NA NA 2 5 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.560284e-08 0 11.1052485 9.6166417 6.5343589 11.6172520 2.1106639 10.0671095 1.5801455 9.2565116 11.1626184 11.1823461 9.3989224 8.0720157 8.4641634 9.7896161 6.1037242 9.8849576 9.7100181 10.1270572 8.7567514 9.1115442 11.7331517 11.0103829 7.8047002 11.7029907 9.4123495 10.1956901 8.3946560 9.8401675 -0.5896589 1.5801455 10.1722045 11.2986005 12.5104894 8.7265193 11.2097217 11.4345117 11.5254440 4.6770233 1.2176030 7.8819130 8.9298738 9.4263495 7.0395946 11.3903773 0.7321389 12.2592518 12.2996466 7.0468621 9.8635958 8.6354450 10.5751447 5.4977018 NA 14.9304033 13.8955708 1.4102325 8.8614489 NA 4.7677872 9.7781984 9.9160493 9.3238751 10.3257437 9.4996883 10.5726291 3.6581658 10.7403143 10.6135857 6.2557273 7.7523124 4.8531823 8.6652663 14.8474046 8.3688775 10.2435232 10.0773493 9.2111376 3.1651241 2.9337992 8.5826651 8.4963741 11.3500006 NA 3.2682248 7.4950459 10.2894381 10.7202824 7.2557273 8.5650560 6.1981405 10.0341193 11.5762438 0.4102325 13.7268375 4.5187617 7.5548958 12.0381135 11.8916588 12.7827627 7.7787441 9.7123053 10.4621264 10.2832972 10.6933260 4.2928774 8.8635083 11.2786744 9.6528165 0.4102325 10.7338554 8.6546017 2.3171304 3.9730877 9.7100181 10.4343385 9.8259794 8.3932313 15.2196793 10.1899571 8.9629067 8.1449473 4.8696691 13.8320067 8.6354450 13.8476322 13.2254208 9.8686443 9.7025594 7.6342397 9.8160758 0.0397610 0.0397610 0.0397610 -0.0276710 -0.0298090 -0.0291750 0.0179170 -0.0287650 -0.0287650 -0.0310860 -0.0310860 -0.0310860 0.0197830 0.0197830 -0.0250720 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0172640 0.0268290 -0.0290580 -0.0790770 -0.0790770 -0.0790770 0.0193630 0.0193630 0.0193630 0.0182430 0.0397610 0.0397610 0.0066653 -0.0276710 -0.0295840 -0.0291750 0.0210430 0.0210430 -0.0287650 -0.0287650 -0.0287650 -0.0033243 -0.0033243 -0.0310860 0.0217440 0.0217440 0.0217440 0.0217440 0.0197830 0.0197830 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0251100 0.0172640 0.0216030 -0.0287650 -0.0753760 -0.0790770 -0.0790770 -0.1094600 0.0193630 0.0193630 0.0182430 0.0217440 -0.0320410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.885211098 13.621099267 4.082660016 10.824130027 6.740437857 10.621213421 7.800406841 1.995195046 8.940643947 8.942593675 -1.589876022 8.354114915 6.811117763 9.857320904 9.811650521 3.767792494 11.490389020 9.097613430 10.583914852 9.633032627 9.356025371 7.127913868 12.188725568 4.292877435 7.600062310 10.572629085 5.980093868 NA 11.389662903 2.317130379 13.086800880 12.136988069 8.768888956 9.959541094 8.798255016 9.311858868 6.075573276 4.243128274 -0.004768766 2.869674034 8.672332695 9.780380152 9.226421345 7.017567870 7.784712049 7.570109197 10.079565716 4.476329838 9.388948277 -0.589658895 11.345402752 4.110680615 4.268217284 9.151123119 5.601345901 8.801481389 10.567900476 10.656978327 8.889007414 4.387514192 13.834174293 2.410232546 10.772729506 NA 8.668803808 6.890017371 7.361522744 9.552344791 11.613578 6.335051 8.455997 11.209722 10.489056 10.262377 11.390377 10.489722 8.813250 10.195690 14.011312 11.289821 8.496374 8.257295 1.580145 6.953270 11.070679 11.2610106 5.9493972 9.2159816 8.5356514 7.6629033 10.1345341 9.8073775 9.4060049 11.7029907 6.1517046 -0.5896589 5.2682173 7.9505594 10.5820400 11.4766633 7.7478593 8.7355432 9.6396574 9.4614467 9.3238751 10.9237186 11.0224151 11.1611540 10.3160008 7.8448658 0.4102325 10.2196481 8.2577961 9.2232171 10.7202824 7.7961000 11.5401647 10.0341193 7.1784219 14.1933383 10.2740368 10.6690982 12.3158127 10.9612250 9.6288009 3.5395187 TCGA-A2-A0EQ 64 0 NA 2426 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 56.63.0 7 3 4 NA 1 3 2 3 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1.977346e-06 5.203543e-07 12.392139 3.977399 8.327523 11.462910 -0.270556 9.969070 -1.270556 9.118565 11.861489 7.241223 9.955281 7.491023 9.090318 9.260853 6.344180 9.129283 10.086473 10.484776 7.249108 5.470937 10.585897 10.319590 13.457445 10.208746 8.999766 10.919296 8.924228 10.047443 0.729444 NA 8.993914 10.242705 12.165011 6.329384 12.606468 11.902211 8.256948 5.457391 3.314436 5.497654 8.798249 5.523888 7.633353 12.623341 NA 10.829148 13.416300 4.314436 9.510011 10.852299 7.671985 5.549651 1.051372 15.391579 10.689835 1.899408 10.521448 -0.270556 6.806287 9.536826 10.119640 9.415096 9.896889 10.476405 10.263287 3.253036 11.171378 10.445862 4.510829 7.856175 14.094153 10.182227 14.740720 5.880639 11.028965 11.510831 9.950454 0.729444 5.329386 6.436830 8.431644 10.395695 NA 4.636364 6.929144 9.687299 10.930063 10.315842 7.718155 6.130350 10.271536 12.390358 2.536824 13.570986 5.104509 8.436830 10.462910 12.548353 12.496103 6.033251 11.042354 11.259877 10.336441 11.259390 3.484357 9.078199 11.894064 11.966681 -0.270556 10.498482 10.381868 2.536824 3.589943 9.950454 11.493098 9.870940 8.812950 15.358813 10.483106 10.507548 8.087023 3.253036 15.425338 7.943790 12.191718 11.515741 9.541648 9.748367 7.972645 9.646306 -0.1146200 -0.1146200 0.4491800 -0.1666700 -0.1654300 1.4150000 0.1368700 0.2010600 0.2010600 -0.3144800 -0.3144800 0.4312500 0.1646000 0.1487500 0.3580600 2.6235000 3.6271000 0.0200590 -0.0074793 0.1511300 -0.3625000 -0.3367600 -0.1953800 -0.0027739 0.4722000 0.1365700 0.1365700 0.1365700 0.2758400 -0.0376290 -0.1146200 -0.1776500 -0.1666700 -0.1673900 -0.1610300 -0.3248400 -0.3248400 0.2010600 0.2010600 0.2010600 -0.2279800 0.1024900 -0.3144800 -0.5009000 -0.5032900 0.1578500 0.1578500 0.2702800 0.2702800 -0.1955000 -0.5195600 0.0019960 -0.0074793 -0.0074793 0.0000000 -0.3303800 -0.3367600 -0.1996200 -0.1953800 -0.2038700 0.4708300 0.1365700 0.1365700 0.2758400 0.1532200 -0.0455750 0.149 0.149 -0.148 -0.148 0.000 0.000 0.000 -0.311 -0.337 -0.168 -0.168 -0.181 0.000 0.101 0.101 0.137 0.137 -0.115 0.335 0.276 0.276 0.144 0.000 0.000 0.000 -0.161 -0.161 -0.167 -0.167 0.137 -0.188 0.201 0.201 -0.175 -0.175 0.596 0.911 -0.503 -0.349 0.104 0.149 0.149 -0.148 -0.148 0.000 0.000 0.000 -0.311 -0.337 -0.168 -0.168 -0.181 0.000 0.101 0.101 0.137 0.137 -0.115 0.335 0.276 0.276 0.144 0.000 0.000 0.000 -0.161 -0.161 -0.167 -0.167 0.137 -0.188 0.201 0.201 -0.175 -0.175 0.596 0.911 -0.503 -0.349 0.104 10.291236 12.474830 1.314407 9.322862 7.333097 12.186467 5.172416 NA 9.115333 8.972645 -1.270556 7.048736 2.536824 10.747671 9.486027 6.268629 10.900648 9.843864 10.146269 11.037810 8.711951 7.087023 10.414220 1.729488 8.816934 10.263287 4.014873 NA 10.981841 3.484357 12.414877 12.347168 8.491022 10.438555 8.686573 10.319590 2.729466 3.858757 -0.270556 3.253036 9.650568 10.372425 10.154687 3.773870 9.096296 6.205205 10.173451 6.380523 9.608288 -1.270556 9.240235 3.773870 4.221320 10.103907 5.993726 8.316311 9.647589 9.067093 11.552838 0.729444 14.171054 0.729444 10.677108 NA 8.964289 4.729471 8.159924 7.147324 13.535312 6.523887 9.637113 12.606468 10.079305 11.204444 12.623341 7.800934 11.113637 10.809622 12.727356 9.785431 8.431644 9.475145 2.051407 8.062626 10.921147 11.497655 6.104511 8.698138 9.856176 8.622773 11.362930 8.554430 7.064861 10.208746 6.605988 -1.270556 9.608288 8.158166 11.994793 11.244925 7.536826 8.913106 9.225326 9.568675 9.415096 10.049143 11.786278 9.893121 10.719930 7.977398 11.363601 9.181558 7.966968 10.255481 10.930063 6.147323 11.510831 10.271536 7.565522 14.472438 10.606372 10.119640 12.567789 11.626182 9.503434 5.729471 TCGA-A2-A0ER 63 0 NA 2263 breast stage ib t1c n1mi m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 56.63.0 3 1 2 NA 3 2 1 1 3 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 12.4654563 6.6789367 8.0525441 10.7634014 0.2695120 10.7556267 -1.7302487 10.2860060 11.9608532 8.5846954 10.2002833 7.1024356 9.9259708 8.1134671 7.7228164 8.3884871 10.4138855 10.5150986 6.6575628 2.1764504 9.4407226 8.8460303 14.3120175 12.0345211 9.4192930 10.9582333 3.8545044 10.4871947 -0.7304880 -0.7304880 7.5292892 12.7018268 12.9334931 7.1884088 12.7794446 13.1879899 7.8526288 4.6958101 0.8544745 6.8879310 8.5937265 11.0564281 5.2120596 13.3916863 1.2695718 9.0286017 14.2966312 3.5549449 9.4281556 11.2734151 6.1824361 5.6873995 -0.7304880 13.3136070 10.9295418 0.2695120 8.0110131 3.0769011 3.1764345 10.2204662 10.6391432 11.5267864 11.7751094 10.2656663 9.3787236 5.3570100 12.1045107 9.6532501 6.2468261 7.3221138 13.3546033 11.4722819 15.3089898 8.2688975 12.1408736 11.8584947 8.4728939 -1.7302487 6.7083376 7.3329406 9.5903464 11.5436328 NA 2.5174773 6.9490259 11.0682202 10.9852934 4.1764345 5.4692185 5.6618636 10.8089470 11.7048255 1.5914879 14.1061141 5.9630325 7.7634016 11.7729990 11.0036204 12.9382647 7.8750256 10.9163296 11.2302719 10.8994489 11.4986651 6.8254002 7.5618676 12.3474464 11.4218307 1.2695718 10.2335257 9.0913198 2.4394636 2.5972451 10.0072157 9.7688936 10.2691937 8.7583901 15.0050887 10.3356351 10.0269359 7.2496852 2.7931051 16.9145675 8.9569215 11.9419712 11.4253128 10.1928734 8.6127318 8.0558155 9.9765641 -0.00761010 -0.00761010 0.00041593 0.00000000 0.00000000 0.01391100 0.00527490 -0.00899060 -0.02899200 3.65690000 3.65690000 0.01838300 0.00513590 0.00213290 0.70232000 3.65690000 3.65690000 -0.02054900 -0.00277070 -0.13199000 0.00527490 -0.01078400 -0.05819300 -0.05819300 -0.05819300 -0.04888300 -0.04888300 -0.04888300 0.04329900 -0.00761010 -0.00761010 0.00000000 0.00000000 0.00291330 0.01391100 0.00485790 0.00485790 -0.00899060 -0.00899060 -0.02899200 0.00000000 0.00000000 -0.76192000 -0.75719000 -0.74142000 -0.03272300 -0.03272300 0.00213290 -0.00138710 0.70232000 -0.75046000 -0.00277070 -0.00277070 0.63426000 -0.13199000 0.00527490 -0.00539920 -0.10802000 -0.05819300 -0.05819300 0.00346870 -0.04888300 -0.04888300 0.00097064 0.00152550 -0.07787800 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 8.0076384 11.8615357 7.4444716 8.6456714 4.3207013 10.4306778 -0.7304880 -0.1454457 8.2091253 5.7773408 NA 6.2739914 2.1764504 10.4670697 8.9304331 2.9699885 8.7543688 9.5909104 15.0487907 10.0603017 9.1995070 8.1521890 9.9773365 2.6618636 9.9743142 9.3787236 3.9134065 NA 10.4817383 3.3139424 12.0827258 12.1083559 6.9525409 10.9375444 7.4692185 9.4313077 2.1764504 0.2695120 0.2695120 2.4394636 9.3456933 9.0865296 10.3446907 4.5549510 7.4021483 5.7613996 11.0623362 6.0377292 10.0945046 NA 10.9237344 2.0769011 7.4116533 9.7746131 7.6283508 3.5174773 9.5761773 8.0410354 11.0845289 -0.1454457 13.7832735 -1.7302487 11.1673914 0.2695120 8.1475967 4.2695494 8.1166034 9.2688414 16.9129968 5.7371513 8.5641666 12.7794446 10.2436020 10.7007823 13.3916863 12.3785603 8.5082492 11.2034209 12.5861810 9.4313077 9.5903464 8.0177388 0.8544745 7.4065367 12.8264710 10.783027 6.909791 8.778331 9.654869 9.277274 10.101937 5.526933 7.409097 12.034521 5.582430 NA 5.949026 8.594435 11.147597 10.043097 9.574912 10.070850 12.801902 5.102436 11.526786 9.949905 13.808705 8.406537 10.592882 9.017739 NA 8.760056 6.534974 5.063960 10.985293 4.573326 10.272361 10.808947 7.367578 13.949108 10.243243 9.546252 12.911598 9.749326 9.628746 -1.730249 TCGA-A2-A0ES 52 0 NA 1127 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 85.58.0 2 2 2 NA 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-08 2.781139e-08 10.9347690 9.7039553 7.2260913 11.1727621 3.4294419 10.6812862 0.5714341 9.9845546 11.5991888 8.4723225 9.4723225 8.0185390 8.8522264 9.6021228 7.3429449 9.0832083 10.4910638 9.9524576 8.1843239 5.5826824 10.5069889 10.1512429 13.7045576 11.0898628 9.7869885 10.5668695 5.6048779 10.6770368 -0.4285659 3.5714584 8.8568578 14.7957588 13.0925039 8.0308872 13.0041932 13.2278804 9.8399975 7.6799804 4.3263432 7.4992336 9.1135200 10.5816340 8.9101921 12.1514786 6.1260436 10.5689879 12.1350094 6.3788098 9.2423596 10.7294341 9.2710281 4.9637747 NA 13.5492440 11.2189567 5.8475811 7.7313272 -0.4285659 4.0633045 10.2301134 10.2278804 9.8723800 11.7021870 10.2640711 10.4973808 3.2153058 11.7162731 9.8945104 6.4903182 7.4753370 11.4830348 11.6816126 14.6932926 7.8516466 11.7555561 11.5170823 8.4169457 3.2153058 3.0308834 8.6429178 9.6734312 12.8720941 -0.4285659 3.2153058 6.3129229 10.2874176 11.6219845 7.2367911 5.1260436 4.2153136 10.7300653 11.9128354 1.7413591 13.4960362 5.6375436 8.3213252 13.4030597 11.2721120 13.0478854 7.9829668 10.4677880 10.9680604 10.8569214 11.3234180 4.8382408 8.0910921 12.0962421 11.0231819 NA 10.3070115 9.3421196 1.7413591 4.0950214 10.2269863 10.3400535 10.5121362 9.2744939 15.1810528 10.1474675 9.9366845 8.3061652 6.0871552 15.9981953 9.1573570 13.4496023 13.4082456 9.9218423 9.5088293 8.1432082 9.7534773 0.00014504 0.00014504 -0.07940000 0.00208690 0.00208690 0.00134130 0.00361400 0.00042234 0.00042234 0.72245000 0.37348000 0.00153190 0.00167070 0.00167070 -0.01221200 -0.00470150 0.86157000 0.03144300 0.03144300 -0.00068662 -0.00250300 0.00611540 -0.02479200 -0.02479200 -0.02479200 -0.01800400 -0.00027083 -0.00027083 -0.00082520 0.00014504 0.00014504 -0.00027083 0.00208690 0.00167070 0.00134130 0.00347520 0.00000000 0.00042234 0.00042234 0.00042234 -0.02862200 -0.02862200 -0.08797100 0.00139320 0.00139320 0.00139320 0.00139320 0.00167070 0.00167070 -0.03072900 -0.08173200 0.03144300 -0.06302600 -0.10169000 -0.00068662 -0.00250300 0.00262570 -0.09405700 -0.02479200 -0.02479200 -0.07973600 -0.01800400 -0.00027083 -0.00082520 -0.00791690 -0.00165650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.1778608 12.3040470 7.8050751 10.0979548 3.0943881 10.3325912 0.8933622 3.2718888 8.2044508 8.7135625 -1.4285659 8.8146296 2.4783506 9.7218376 9.1365577 1.5714341 10.5647478 9.7960602 12.6328268 9.5615595 9.5427620 8.0910921 11.1434451 2.0309010 10.1231639 10.4973808 8.3061652 NA 9.5154355 5.1106138 13.2026326 12.2135073 8.1971646 10.7802996 9.1289192 8.8866050 5.8752370 2.2719037 1.3787890 1.3787890 8.4947832 9.1115835 10.1592331 6.4356419 7.7852648 5.3916337 10.0092076 6.0633088 9.7519863 0.8933622 11.5900035 2.1564290 4.8752345 9.6440639 5.5008913 3.4783506 9.0552713 8.2243003 6.9850837 0.5714341 13.9474792 NA 10.4122335 NA 8.0592958 6.2080802 8.0370219 7.9068461 11.907894 4.429435 8.334668 13.004193 10.417729 10.001385 12.151479 12.809114 10.584810 10.939689 14.116541 11.924740 9.673431 8.637545 -1.428566 7.952999 11.703795 11.282907 7.051236 9.629447 8.916861 7.728803 10.373649 7.034980 7.306166 11.089863 6.110614 7.254450 7.690397 5.902373 12.544615 10.365465 8.745133 8.143208 13.022087 6.319649 9.872380 10.325926 11.589134 9.658255 10.461720 9.384435 -1.428566 9.422947 8.189933 6.333007 11.621984 6.711008 10.978843 10.730065 7.129876 14.383508 10.020088 10.491436 13.116480 10.049720 9.859168 1.378789 TCGA-A2-A0ET 58 0 NA 1066 breast stage iiia t2 n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 56.63.0 3 5 1 NA NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 12.3675976 5.5079151 8.2500236 12.5711815 NA 10.8112608 1.7005729 10.7043121 11.6085772 6.4193788 10.4301807 7.6644196 9.9751322 8.8595904 8.5533494 8.7293869 9.8090845 10.3776923 5.9982406 2.8160467 10.8765252 9.1092435 13.9672977 7.5543893 9.4648788 11.6056962 5.1490195 9.5439577 -1.8841677 1.9229590 7.5668083 11.4835581 13.5771728 8.1613572 13.0087093 12.9608915 7.4621112 4.7594541 1.2855206 2.2855206 8.8713197 8.6787938 5.3635250 13.2180653 0.4375474 9.4290474 15.1252074 -0.2993827 10.2300589 9.7417627 5.2551495 8.8587488 -1.8841677 14.9790286 9.2754688 1.7005729 6.8503069 NA 2.7594541 10.0719737 11.0062417 11.1435034 9.8663044 10.0396676 9.3383923 -0.2993827 11.2088500 10.5971446 6.6547563 8.2500236 -0.2993827 10.6019297 13.9561787 9.4673041 13.1467817 11.5986574 6.7413065 -1.8841677 4.7738065 8.2678822 9.0849840 11.4236520 NA 3.2855206 7.2905230 10.3590690 10.8667230 7.8604315 6.0404103 3.0224921 11.1565721 12.4163790 0.7005285 13.5876219 8.3975275 9.0748749 11.0652418 8.7431312 13.0282997 8.1776438 10.3638216 10.8598006 11.2400872 11.1398714 5.8903835 8.2254282 11.0045309 10.0907289 NA 10.5693825 9.2973710 -0.2993827 3.2859200 9.4170936 11.2037231 10.1313609 9.1579408 15.0430166 11.3248985 10.1517711 9.8034105 -0.2993827 14.9292784 7.1977465 11.6681465 10.3620411 10.3954981 9.0871411 8.6624918 11.0260959 2.0403e-01 7.8819e-01 7.7783e-01 -4.9605e-03 -1.1008e-03 4.4213e-01 3.7058e-01 3.5862e-01 -5.6112e-01 1.7221e-03 1.7221e-03 0.0000e+00 1.5645e-02 1.5645e-02 -5.5673e-01 -5.5673e-01 -5.5673e-01 3.5078e-01 3.5078e-01 1.8433e-01 -2.0107e-01 -3.4946e-01 4.6578e-01 4.6578e-01 4.6578e-01 2.5972e-01 2.5972e-01 2.5972e-01 5.8793e-01 -4.6839e-01 -4.2139e-01 -1.9069e-01 -4.9605e-03 4.4213e-01 9.6464e-03 3.8079e-01 3.8079e-01 3.5862e-01 -5.6112e-01 -5.6112e-01 -1.7076e-01 -2.2851e-01 1.7221e-03 -2.3919e-01 -2.3771e-01 -1.3054e-01 -1.4536e-01 1.5645e-02 1.5645e-02 -5.5673e-01 -5.5673e-01 3.5078e-01 3.5078e-01 3.2504e-01 2.0907e-01 -2.0107e-01 -3.4384e-01 4.8689e-01 4.6578e-01 4.6578e-01 1.7263e-05 2.5972e-01 2.5972e-01 5.8998e-01 -2.1453e-02 -5.9999e-01 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 7.8177703 10.3038772 1.8160262 8.6134491 2.6824160 11.0134429 0.7005285 NA 8.3299165 5.9100131 NA 5.1599924 -1.8841677 9.8371239 9.7526752 1.1155660 8.9974762 10.4182363 10.7549382 9.8281244 10.0695975 8.6977394 9.8138681 2.8160467 10.0138209 9.3383923 1.7005729 -1.8841677 11.1565721 2.7594541 12.1346669 11.2787754 7.9293786 10.2027287 9.6243826 9.3599612 5.5502266 -0.2993827 -1.8841677 8.7117871 8.7585517 8.7247761 9.2480972 2.4375207 1.9352711 5.4193771 10.7399360 5.7005590 10.3794534 NA 10.6317899 2.5750218 3.9982406 9.6267768 4.8778129 1.5750218 9.2448804 7.5397637 6.2345377 -1.8841677 13.8450589 -0.2993827 11.3511630 NA 7.1789924 5.0463339 8.1503962 9.5239271 13.2698222 4.4375274 9.0639648 13.0087093 10.6279873 10.9437339 13.2180653 10.1890695 8.6797563 11.0826435 13.5232304 11.1201690 9.0849840 8.3152696 0.7005285 8.3311306 11.5521789 10.266931 7.675930 8.397527 9.623392 9.322612 10.202012 7.124026 6.945320 7.554389 6.900233 -0.884434 9.401000 8.220170 7.982876 9.861272 8.150396 8.177644 13.277674 4.985960 11.143503 11.083724 11.035578 8.274207 10.286774 8.992882 NA 8.903272 6.831662 4.069797 10.866723 6.239719 10.602267 11.156572 7.317868 13.626269 10.304495 9.569897 12.527704 9.750409 10.047443 2.115599 TCGA-A2-A0EU 79 0 NA 1043 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 61.60.0 3 1 1 2 3 2 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 1.946798e-07 11.7090488 5.3549176 7.8028427 11.3688563 0.9903740 10.5560180 1.6684369 10.2411168 11.4817970 10.7899501 10.4717405 6.5510591 8.4299678 9.0226660 9.0127125 8.4725475 10.2803635 10.1617717 7.0259689 3.9903468 10.3649495 8.8582412 14.4904894 11.1590168 9.5441660 10.7297878 4.6456959 10.4233041 2.2533842 0.9903740 7.8130751 10.3018660 12.7188605 6.8383417 12.5130243 13.1438967 9.5639919 3.7128159 -1.3316993 8.8092463 8.9363738 6.3826621 6.4757707 13.4086190 3.1278479 9.0412816 13.8145079 3.1919732 10.0474862 11.0043651 5.9721964 3.4757723 -1.3316993 12.5461666 8.2249225 -0.3315178 7.6370835 4.5013054 3.6226141 9.7196255 10.7713765 10.6356429 11.9549743 10.0276170 9.4693164 0.9903740 11.0369231 9.7710485 6.2230054 6.3122731 2.1278644 11.9903447 14.5943419 7.2597141 11.4941704 10.9281598 10.6381628 -0.3315178 0.2533842 7.0650218 9.1870697 11.2902396 -1.3316993 5.5139076 7.5295032 10.2608737 10.8739044 10.3762071 5.7664494 5.2075766 10.0894294 12.0362408 1.6684369 13.4696702 6.9398801 7.6514098 11.2347085 12.1612712 12.5525871 7.9139695 10.2669344 10.7595214 10.0780091 10.6620627 4.6226141 8.8495690 11.4274725 12.4103049 1.9903377 10.3403998 9.5798086 1.2533842 2.9163429 9.2191634 11.1178232 10.0730260 9.6824371 14.8764413 10.3976125 10.8060482 8.1860860 1.8383467 16.5072573 8.1257973 11.8461475 11.5846693 9.3014118 8.6485560 7.9948461 9.5868402 0.0119580 -0.0112640 -0.0112640 0.0000000 -0.0005339 0.0282000 0.4012700 -0.0051227 -0.0051227 1.2450000 1.4974000 1.4974000 0.0632230 0.0508080 0.3746700 0.3746700 0.3746700 0.7373900 0.7373900 -0.3166900 -0.3949700 -0.0175290 0.3149800 0.3149800 0.3149800 0.6604800 0.6604800 0.6417600 1.0814000 -0.0403300 0.0054139 -0.2975600 0.0000000 0.0282000 0.0282000 0.4012700 0.4012700 -0.0051227 -0.0051227 -0.0051227 0.0780560 0.0764220 -1.1917000 -0.4062600 -0.4062600 -0.4062600 -0.4315200 0.0508080 0.0606510 0.2462200 0.3746700 0.7373900 0.7373900 0.7373900 -0.3166900 -0.4122100 -0.0175290 -0.4288700 0.3149800 0.3149800 -0.3116700 0.5927200 0.6417600 1.0814000 -0.4184900 -0.4449100 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.660 0.660 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.660 0.660 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 7.5722985 12.7470678 8.8790879 9.0767464 4.4708687 10.2201248 1.2533842 0.2533842 8.1900172 8.1662685 -1.3316993 6.9948456 4.0259678 10.6638304 9.6648901 1.4757594 7.9835660 9.8729877 6.3408417 10.1637719 9.1314403 7.9491876 10.5541130 -0.3315178 10.0612706 9.4693164 3.9903468 0.6683915 10.2339947 4.0607305 12.6666544 11.5954538 8.1602698 10.3571041 8.5107669 9.6449807 1.2533842 0.6683915 NA 6.1441504 9.6456964 9.8821284 11.0281662 4.5753063 6.5558806 6.8532921 10.9390039 6.7925378 9.9020363 NA 9.5395518 3.1278479 4.2230054 10.0235969 5.9449123 3.7976978 9.5939711 7.5387810 5.2230054 6.5872795 13.7969749 0.2533842 10.4203790 -1.3316993 8.4182861 4.2533767 8.9595873 8.7169035 13.999266 6.290469 9.057510 12.513024 9.538781 10.631313 13.408619 13.140854 8.896033 10.967338 12.806128 11.298911 9.187070 7.835835 1.838347 7.906821 12.450493 10.500120 7.347897 9.546468 9.847704 9.191979 10.012285 5.297775 8.184117 11.159017 6.766448 2.575312 4.253377 7.291347 9.998773 9.188053 8.865633 9.074622 12.641666 4.838342 10.635643 10.261808 12.026518 9.310468 9.821335 9.488596 NA 8.371888 7.172242 4.312273 10.873904 6.925805 10.245373 10.089429 6.897236 13.292641 10.502888 10.787682 12.525523 10.364949 8.864404 1.475759 TCGA-A2-A0EV 80 0 NA 968 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 5 2 1 NA 2 2 1 2 2 2 NA NA 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.422302e-06 2.42832e-07 11.5122726 5.9319808 7.6813312 11.0812615 -0.5108681 9.8261024 0.4890291 10.1432266 11.9699545 9.1074235 9.9808912 7.7905342 9.4763021 9.3846135 7.8813557 9.2605275 10.0560434 9.7505454 7.3594026 4.6788607 10.1565932 9.8349976 13.1709353 10.4851584 9.7481928 10.7366690 6.3028198 9.7051413 -0.5108681 NA 8.6825635 11.3516754 11.8659774 7.3345281 13.6711996 13.2524580 8.4932586 4.9808890 NA 6.3594034 8.3439065 8.8333341 7.4833918 12.7645806 -1.5108681 10.7024461 13.3397621 2.5764980 9.6086278 10.7464259 7.1543736 4.5551290 0.0739573 15.1096278 12.1908860 2.5764980 7.1328945 NA 4.1894767 9.5162530 10.6736035 9.8580901 11.3132013 10.0340026 10.1152034 -0.5108681 11.5885503 9.9241873 7.2996101 8.4777227 0.4890291 11.2313475 15.0970618 7.4316405 9.5678561 11.6301873 9.4227288 3.0126044 -1.5108681 7.9788860 9.1702766 12.8439073 NA 6.5551275 7.3092171 9.8591805 10.9405068 6.2899377 6.4663188 5.3345289 10.2526654 11.9607133 2.5764980 13.9940743 7.1998441 7.4605820 12.6005813 13.8289924 12.6943732 8.3407870 11.2355524 10.6686362 10.6347633 11.2094961 5.1328935 8.5605006 12.9868899 10.9670493 -0.5108681 10.4688205 8.8030549 0.8109777 2.8799802 9.8416334 10.3294227 8.6972724 9.6978820 15.5083247 10.6330590 10.0445859 8.2405819 2.2963987 15.9728696 8.6438562 13.1758121 11.2086408 10.3163808 9.5578163 9.0145589 10.7847726 -0.02598700 0.62825000 0.65259000 -0.01161100 0.69783000 0.00499690 0.30294000 0.30044000 -0.04284200 0.42032000 0.42032000 0.00124810 0.32157000 -0.36136000 -0.01013700 -0.04425300 -0.04425300 -0.36850000 0.32414000 -0.35816000 0.00042322 0.30809000 0.85799000 0.85799000 0.89146000 -0.00857660 -0.00857660 -0.00857660 0.32141000 -0.02598700 -0.02598700 -0.01876100 -0.02141300 -0.01574100 0.00499690 0.28961000 0.28961000 0.30697000 0.00000000 -0.01730200 0.32125000 0.31466000 -0.72323000 -0.00429290 -0.00429290 -0.00429290 -0.04708600 -0.36136000 -0.01587300 -0.01013700 -0.00678130 -0.36850000 0.32414000 0.32834000 -0.34366000 -0.02027500 -0.00735360 -0.36737000 -0.40451000 0.89146000 -0.35345000 -0.00857660 -0.00857660 -0.05212600 -0.00415460 -0.09775900 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.295 0.295 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.295 0.295 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 9.2024246 13.9090641 7.2405824 9.1101742 3.5334263 11.1337956 -0.5108681 -1.5108681 8.8586353 8.0474588 NA 7.7530349 3.6984963 10.2393263 9.1658768 3.6984963 8.6438562 8.8941796 8.8920500 10.8134999 9.5472057 7.7674873 10.3309955 2.1894767 7.1614635 10.1152034 2.9484700 NA 11.1985527 2.9484700 12.0597239 11.9610942 7.8132188 10.0417072 9.5605004 9.3974308 4.3219281 1.4890291 -1.5108681 3.2963987 8.5402470 9.6570833 10.2245941 5.1037494 7.2599334 3.6589655 9.8973678 5.7651634 10.2879148 NA 11.2109917 2.8109572 3.9808936 9.7192026 6.8030552 6.0436267 9.7422946 8.9226236 7.9828938 1.4890291 13.5550432 -0.5108681 10.5578163 -0.5108681 7.7322122 4.0436245 8.5645173 8.1129195 13.3355054 5.0588922 8.6451212 13.6711996 9.9257497 10.7178567 12.7645806 12.9644549 9.2662935 10.3092170 13.1771791 8.4079012 9.1702766 9.0945177 0.0739573 8.1790362 11.7186080 11.053426 7.070239 9.398931 8.819955 9.816029 10.047263 7.404918 5.296391 10.485158 6.618321 4.489035 4.948470 7.664363 10.406783 10.556472 8.379303 8.752307 12.428801 6.283453 9.858090 10.273264 10.564851 9.689937 10.675462 9.479142 2.395940 9.729561 7.753481 6.500265 10.940507 7.216958 9.869499 10.252665 8.010776 13.347893 9.975873 10.145016 13.582332 10.338052 9.326666 2.658965 TCGA-A2-A0EW 53 0 NA 905 breast stage iiic t1b n3a m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 26 white not hispanic or latino 85.58.0 8 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 8.343418e-08 11.1918953 9.6594860 6.7788958 11.3920847 4.6320530 11.0118036 -1.4973639 10.1918952 11.8886333 9.1466270 9.8448456 8.2032105 9.0253525 9.4164083 7.6950640 9.2734348 11.2668131 9.5492129 8.5361940 3.3101220 10.6553726 9.5702052 11.1300767 11.5246184 9.3884672 10.5230563 5.6320530 10.4907419 0.5027379 5.2170174 9.6895041 13.2032648 12.3511004 8.1910212 12.7906275 12.6922866 9.9121618 6.1609827 2.2032012 7.6626420 9.0174849 10.5454563 8.4452856 12.5266984 2.5027634 10.8303235 13.0263328 7.5981679 9.7085702 10.5461400 10.2148679 5.8603222 NA 14.5236753 9.7116148 5.2442363 8.3991031 1.3101074 5.2709550 10.2659832 10.4518680 10.4555122 11.7428168 10.3161513 9.8139516 2.8950893 12.2106692 10.2323917 6.7835418 8.0970956 10.5509171 10.7164827 14.4090273 8.7438246 11.8712773 11.5111995 7.7996870 2.5902427 4.9946250 8.6333415 9.6152105 12.6793336 NA 4.5688590 6.9580979 9.9596386 11.6786323 5.0573593 6.2643225 4.6925946 10.7396820 11.7833967 NA 13.4749429 4.8246966 8.2066745 12.6875687 12.3559829 13.0150793 7.7435621 10.2589101 11.0903140 10.8132502 11.5265252 4.8950893 8.2049438 11.5239243 9.7393830 0.5027379 10.4156602 9.1082503 1.5027889 4.0616466 9.7158750 10.3165521 9.9870903 9.1110256 15.0848981 10.0520743 9.8088326 8.7158752 3.7881741 15.3709182 10.3129408 13.2855132 13.3056911 10.0060997 9.7453496 8.4275835 10.0448644 -0.0021570 -0.0021570 0.0044411 0.0084743 0.0054092 -0.0080244 -0.0003442 0.0011093 -0.0041940 2.1514000 0.0202030 -0.0023204 0.0051359 0.0051359 0.0087528 0.8846600 1.5910000 0.0011093 0.0011093 -0.0829340 0.0031508 0.0176840 0.0058309 0.0058309 0.0058309 0.0018030 0.0018030 0.0018030 0.0178240 0.0143300 -0.0021570 0.0000000 0.0084743 -0.0080244 -0.0080244 -0.0003442 -0.0003442 0.0011093 -0.0041940 -0.0015243 -0.0011087 -0.0011087 -0.4512600 0.0079175 0.0079175 0.0079175 0.0157270 0.0051359 0.0139110 0.0097276 -0.4387500 0.0011093 0.0011093 0.0011093 -0.0829340 0.0031508 0.0245480 -0.4366900 0.0058309 0.0058309 0.0066653 0.0018030 0.0018030 0.0178240 0.0077783 -0.4391800 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 9.51609357 13.47498784 8.22557861 10.67956736 3.09911002 10.96910227 3.45696381 1.50278885 8.57423323 9.24508037 -1.49736388 8.96253023 4.63205296 10.01205098 9.53481664 1.67269688 10.22813710 9.82582569 10.81933528 10.39531370 9.84113957 7.78122003 12.23015956 3.50277612 9.99712654 9.81395158 5.52513865 -0.49716024 10.28740569 4.50276976 12.74348768 12.16254384 9.47359577 10.36385780 8.80426722 9.04676933 5.64232323 -0.49716024 1.50278885 4.33566190 8.69135968 9.24170745 10.23281638 7.96425017 8.62766775 6.37313486 10.11056357 6.22387043 9.51748889 0.50273794 12.15583985 5.56885905 5.43350699 9.42704146 5.93848341 5.13212850 9.70489461 9.35373900 6.78354178 -1.49736388 13.99712647 0.08773438 10.38579598 -1.49736388 7.06882449 6.43350866 7.85149920 8.97951694 14.3102113 4.9121612 8.5594084 12.7906275 10.4999504 10.3769838 12.5266984 12.3791919 9.9505773 10.9787576 13.8138806 11.6884207 9.6152105 8.4216340 -0.4971602 7.7122243 11.4942927 11.345710 6.657589 9.149329 8.747135 7.897234 10.728343 7.412664 7.471438 11.524618 6.316551 2.750692 5.558053 6.297577 11.588907 10.394555 8.682680 8.525139 12.355593 6.257657 10.455512 10.210993 11.852052 10.199304 10.632054 8.643601 1.087734 9.315413 8.351050 6.912161 11.678632 6.916399 10.664382 10.739682 7.287406 14.226192 10.218304 10.160089 12.776129 10.583588 10.050629 4.026331 TCGA-A2-A0EX 46 0 NA 752 breast stage iib t3 n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 56.63.0 2 2 5 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 8.343418e-08 11.0435541 8.4612822 6.5832242 12.1245774 2.2678653 9.5045356 NA 9.6679721 11.8623632 7.7597218 9.2770614 7.7742217 8.7032551 10.0961497 6.7914312 8.3241373 10.0909467 9.4558958 7.5054051 3.0563581 9.3349365 10.4477781 9.2719618 10.9877245 9.6020407 10.2493065 5.4377937 10.3077849 0.8084262 4.0563668 8.2699168 11.2375825 13.2020959 7.3437125 13.7664462 13.1631688 9.8865881 4.8528328 0.8084262 7.2637650 8.2801124 9.1303654 8.1053533 12.7459031 -1.1916561 10.5762080 13.7154688 4.4808597 9.0251833 10.7706104 7.1258505 4.0178863 NA 13.3000268 9.9189206 2.2678653 7.8112527 -1.1916561 4.4522923 9.2061120 10.2446283 9.0408582 10.4590404 9.7949906 9.8691333 2.9783604 11.1337428 10.1604808 6.6093369 7.5019239 -1.1916561 11.1150687 15.0464688 6.6044776 11.0575508 10.9588193 7.7243167 2.2678653 3.1303708 8.0705321 8.7799810 11.4850556 -0.1914914 5.0752245 6.9221800 10.1455017 11.1861901 5.5363576 5.9783627 4.1303626 10.3187071 11.9491074 -1.1916561 13.9598107 5.6413264 6.9273786 12.5082267 13.3363419 12.4169232 7.7362152 10.3132563 11.0411581 10.7138958 10.8311520 4.3934025 8.6190091 12.3258607 11.6091351 -0.1914914 10.1643390 9.5583069 0.3934162 2.8316949 9.9524582 10.6198121 10.1659893 9.0372559 14.8530236 10.1013341 10.8259417 6.8027903 4.8958988 15.8368938 8.8027907 12.8060579 11.7273006 9.9396512 9.4887970 8.0611027 9.7759878 -0.0042516 0.0111210 0.0012481 0.0016642 -0.0144280 0.0038854 0.7702900 -0.0261670 -0.0412160 3.6569000 0.5530100 2.9123000 -0.0232170 -0.0232170 -0.0357430 -0.0049844 -0.0182530 -0.0313590 -0.0313590 0.0155870 -0.0111140 -0.0048291 0.0331270 0.0331270 0.0331270 0.0339720 0.5013400 0.5013400 0.0231450 0.0592270 0.0111210 0.0172640 0.0203900 0.0038854 -0.0071958 -0.4855400 -0.0107710 -0.0261670 -0.0412160 -0.0342230 0.0921700 0.0888370 -0.4971500 0.0144700 0.0144700 0.0144700 0.0144700 -0.0194520 -0.0194520 -0.0357430 -0.0376260 -0.0313590 -0.0313590 -0.0313590 0.0155870 0.0065262 -0.0048291 -0.4782800 -0.4603500 0.0331270 -0.0515860 0.0339720 0.5013400 0.0231450 -0.0358570 0.0394780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 8.9945517 12.9571522 8.9247813 9.6601863 3.9783604 10.2611933 2.7153223 2.6157929 8.8998729 9.0093360 0.8084262 7.9957892 2.7153223 10.0955725 8.8785583 0.3934162 9.0717066 8.9195731 10.8835822 10.7957014 9.3506471 7.5431471 10.8698086 2.6157929 8.2596486 9.8691333 6.9883461 NA 10.5376332 3.3320061 13.8263332 12.3267217 8.5599816 10.1942997 7.6971803 9.8985497 3.2678653 1.1303379 NA 0.8084262 9.4486823 9.7878626 10.6218177 5.8959012 6.9472208 5.7857179 9.8725064 6.1482874 9.5683255 NA 11.1626868 2.8959036 3.9377210 10.0977013 7.1045275 4.7153278 9.5658273 8.0752240 7.6028532 -1.1916561 14.4259335 -1.1916561 10.2997894 NA 8.7198293 5.7509521 8.1681867 9.0504206 13.082306 4.666416 9.065825 13.766446 10.195378 10.038458 12.745903 11.951980 8.987102 10.498435 12.734641 11.935142 8.779981 8.541453 NA 7.455896 10.713448 11.1516231 5.7153278 9.0456472 9.3505019 7.5633252 10.1158089 6.8637192 6.9273786 10.9877245 7.5566302 4.2347006 6.0081104 5.3387275 11.1187661 10.3471113 9.2821430 9.0007302 11.9208769 6.2430654 9.0408582 10.7864327 11.2063793 8.8321916 10.3773435 9.3475961 NA 9.4212597 8.0668152 6.8027903 11.1861901 7.7391744 10.2877124 10.3187071 7.0276064 15.2106667 10.2441076 10.6282173 12.6547113 10.2780792 9.2061120 -0.1914914 TCGA-A2-A0EY 62 0 NA 735 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 56.63.0 6 3 4 NA 1 5 1 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.717879e-06 1.838585e-06 12.5261682 6.2637593 6.6890657 11.8038050 0.1344838 9.8198099 1.3568762 8.8893646 11.7635300 7.0007257 9.6243250 8.1897593 9.8804315 9.4653940 7.8804315 9.5495146 9.8343386 9.8504391 6.8069027 3.7974385 10.0237275 10.7418074 14.2990698 10.0930298 9.5310818 10.6804068 6.2289937 10.8583996 0.1344838 4.9245560 8.2377649 11.8120499 12.6392960 7.4043829 16.6075538 12.2852821 8.2620417 6.4802522 4.1933696 5.3308739 8.6475466 11.0102264 7.3308739 12.9080284 NA 10.4582824 12.8888774 3.3568762 9.5725757 11.6118980 8.8949199 4.1041018 NA 14.5944855 9.9825731 1.5495213 7.8532952 -0.4504787 4.7393405 10.9040394 11.6108857 9.2943483 10.3950046 10.0973731 9.8731323 -0.4504787 11.6893856 10.2245895 6.3950045 7.4564053 11.2007905 10.5853446 14.7242257 9.3987554 11.1031439 10.3512229 8.3044020 1.1344838 5.3044015 7.2041505 8.8406851 11.1628436 NA 5.2077250 8.2993839 8.6488623 10.2126278 7.0171202 6.6102099 5.0413657 11.1879504 11.3439304 4.7589694 13.5005260 6.7244402 7.9026615 11.9728931 13.1087721 12.6486979 7.2603212 10.9791828 10.7638336 9.9813621 10.7322192 4.2774343 8.6632567 11.7989243 9.0068955 -1.4504787 11.0229666 9.6402885 2.8714494 4.2538305 9.7119059 10.9991791 10.6716954 9.0503564 14.6750693 10.0478651 10.3500101 9.0027852 4.0730747 15.9735332 10.4067180 13.1226883 10.6807285 9.3957884 8.8882510 8.4336852 10.6506301 -3.7970e-01 6.4323e-01 6.5914e-01 -1.6478e-02 6.7672e-01 -3.9457e-01 -3.9102e-01 6.8062e-01 3.6553e-01 -8.4879e-03 -8.4879e-03 7.3448e-01 -1.9775e-02 0.0000e+00 3.5767e-01 3.4610e-01 3.4610e-01 3.1252e-01 -2.3752e-02 7.0732e-01 -3.7182e-01 -3.6775e-01 3.6569e+00 3.6569e+00 -2.3961e-02 2.7563e-01 1.6579e-01 1.6579e-01 3.8000e-01 -3.7857e-01 -3.7970e-01 -1.7578e-02 -7.5214e-03 -6.4422e-02 -8.0545e-01 -4.0067e-01 -8.0039e-01 6.8062e-01 3.6553e-01 3.6963e-01 3.9079e-01 -8.5372e-02 -8.4879e-03 -2.7157e-01 4.7455e-01 -3.7215e-01 6.5657e-01 0.0000e+00 1.5326e-02 -3.8597e-01 3.4610e-01 3.1252e-01 3.1156e-01 -3.9022e-01 6.9229e-01 -3.8082e-01 -7.8628e-01 -4.1842e-01 -3.7734e-01 -5.3794e-02 5.0484e-02 7.7380e-01 1.6579e-01 3.8000e-01 2.3065e-01 6.9177e-05 0.000 0.000 0.000 0.346 0.313 0.000 0.707 0.000 -0.368 -0.353 -0.353 -0.353 0.000 -0.388 0.000 0.276 0.276 -0.380 0.264 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.317 0.000 0.000 -0.401 -0.401 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.346 0.313 0.000 0.707 0.000 -0.368 -0.353 -0.353 -0.353 0.000 -0.388 0.000 0.276 0.276 -0.380 0.264 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.317 0.000 0.000 -0.401 -0.401 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 8.7516385 12.9622167 3.3568762 9.3218291 4.2774343 11.0725864 2.8714494 NA 8.6329937 6.4074955 -1.4504787 7.7319089 1.5495213 10.7531684 9.5296541 3.5939035 8.8804315 9.8504391 10.4144745 10.6455708 9.8953799 7.9418317 10.5203394 2.2499610 8.1401017 9.8731323 8.3439305 -1.4504787 11.0644751 2.4564119 12.7363252 12.2341536 7.1307147 10.4431953 6.9673669 9.5544373 8.2499544 4.4321577 1.1344838 8.3060708 9.1688175 9.8492950 10.4004826 3.8349134 9.7262737 7.2977078 10.1122340 6.7686832 9.1960731 NA 10.0448699 2.8714494 4.5037113 10.0409167 7.0809348 6.1568456 8.8871365 8.6979910 7.1568446 2.7974488 13.2254165 0.5495213 11.1443057 -1.4504787 6.4443325 4.5718831 8.2289947 10.3835905 11.818327 5.871442 8.636977 16.607554 10.332513 10.841549 12.908028 11.258167 9.312660 10.772611 12.972762 9.120319 8.840685 7.100262 3.073083 7.731909 11.182055 11.997631 5.915836 8.496421 8.713164 8.701799 11.306719 7.546694 8.905966 10.093030 5.719441 -1.450479 5.816300 6.983642 10.007408 11.365098 8.182328 8.478773 10.013550 6.768683 9.294348 9.806313 11.554262 9.948793 11.192469 9.216626 5.593909 9.998261 6.905967 7.029295 10.212628 6.825639 11.708440 11.187950 7.130715 13.284542 9.482467 10.364097 12.763758 10.884067 10.122215 2.134484 TCGA-A2-A0ST 62 0 NA 3017 breast stage iia t1c n1a m0 4-9-2014 female 2003 2619 NA infiltrating ductal carcinoma no 3 white not hispanic or latino 72.62.0 4 4 2 5 3 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 8.343418e-08 11.9380573 5.6937434 7.2627197 11.4998195 1.5822188 10.5611490 -0.2251602 9.6125073 11.5253770 8.9195376 9.0346226 8.4277243 8.9182625 10.2861378 5.6452434 9.4744519 9.1191754 10.6148704 8.6109296 8.1948396 10.1741573 10.6129014 12.9773858 11.0073003 9.7607213 10.7731172 8.9696363 10.2677339 0.3598585 -0.2251602 9.6982068 12.0491119 12.7237941 6.2826733 12.0949747 12.1368231 10.0363867 5.0786611 0.7748398 6.4543602 9.5163463 9.5255864 8.1258185 9.1618197 1.7748819 11.7704699 11.5664493 7.4959789 9.4538139 10.4688018 6.6140826 5.5950590 0.7748398 15.7693758 11.5067838 1.9448210 9.1832091 2.0968016 6.9597551 9.8503585 10.0322671 9.4631297 10.6613380 10.1401082 10.4744518 3.0968016 11.3699037 10.9643951 4.4753184 8.1520901 3.7748819 8.7888997 14.8190813 7.7387293 11.4090097 10.6911320 11.1379190 2.4753184 0.3598585 8.3294681 9.3052857 10.8399588 NA 4.0968100 7.6967200 10.5409941 11.4328676 5.6817697 8.5297667 6.0036989 9.6359662 11.9166672 -1.2249916 13.5303407 4.3895875 7.5886607 11.3720008 11.9043234 13.0377817 6.2506130 10.3309063 10.7979406 10.5494234 11.1658544 4.5822368 8.2667327 11.8194442 8.8288051 -1.2249916 10.7030276 9.5205537 2.3598304 3.8223325 10.1007470 11.6649536 10.0204321 9.4455355 15.1432835 10.3724664 10.0024952 6.7232459 3.2984384 13.7488009 6.5562393 12.9728639 12.3717679 10.4155762 9.7854075 8.3313855 9.8735299 0.0136250 0.1367200 0.1365100 -0.0164720 -0.0164720 -0.0654540 -0.0279510 0.0702900 1.7435000 0.0196360 0.0196360 0.0196360 0.1287300 0.0395130 0.8321400 0.0051509 0.3624700 0.0991350 -0.0566610 0.1919200 -0.0608890 -0.0542920 -0.0487550 -0.0077695 0.0044235 -0.0457770 3.0890000 0.0420170 -0.0015312 0.0136250 0.0136250 -0.0087988 -0.0164720 -0.0654540 0.0498170 -0.0279510 -0.0279510 0.0702900 0.0702900 0.1026300 0.0492140 0.1362700 0.0196360 0.0000000 0.0000000 0.0000000 -0.0522680 0.0395130 0.0395130 -0.0388570 -0.0621660 0.0991350 -0.0566610 -0.0566610 -0.0631730 -0.0608890 -0.0542920 0.0448500 -0.0487550 -0.0077695 -0.0600830 -0.0457770 0.0420170 -0.1660000 0.2031900 -0.0680000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.8804605 12.4037805 -0.2251602 9.7685254 7.5364306 10.7759357 6.7692322 3.9041661 9.1639729 8.7056168 1.0968016 7.7348810 4.2667341 10.1417479 8.9988809 1.7748819 9.8951172 8.7944701 8.8951172 9.3812845 8.6913412 7.4543593 10.5591052 3.9843341 8.2219626 10.4744518 3.4753184 -0.2251602 11.1299551 3.3598444 13.5827373 12.2627194 8.1863901 9.9622315 11.3696705 9.8840571 4.9246273 4.0228028 -0.2251602 0.3598585 8.0180533 9.8179067 8.1455669 5.5692966 7.8596876 6.3294681 10.1296797 5.3140366 9.6069781 4.7056186 11.5403727 4.5297647 4.0228028 9.7010642 6.9892957 10.1163982 10.3733971 9.7840081 11.2071602 1.0968016 14.0002374 2.0968016 10.8382744 NA 9.0717956 5.6937434 7.8596876 8.0036978 11.6694717 10.6010306 8.5095890 12.0949747 10.3347344 10.3385523 9.1618197 10.3135533 9.7783972 11.4934122 13.7369168 12.1647795 9.3052857 8.0346224 0.3598585 7.5692951 11.0680636 10.923356 4.904161 9.023993 9.157503 8.425931 9.996303 9.451718 8.256679 11.007300 10.520133 1.582219 8.194840 8.740938 13.338374 11.632860 7.290579 8.575779 10.383596 10.336167 9.463130 10.622720 11.111386 10.954166 10.744985 8.997674 1.096802 9.601134 8.165048 10.815854 11.432868 4.266734 10.962850 9.635966 7.974552 14.519526 10.209508 10.592662 12.832194 11.011193 9.350419 4.201148 TCGA-A2-A0SU 66 0 NA 1662 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 2 2 2 4 2 1 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.39057e-07 10.8780886 6.6848776 7.1891525 11.3221998 0.3689359 10.1682549 -1.2159149 9.6271468 11.8231012 9.1415628 9.5857192 6.9235616 9.2102756 8.6863860 8.3462531 8.7938393 10.5182971 9.6137337 6.9489173 3.6419968 8.9489176 10.5530221 12.9166712 11.8455508 9.1371577 10.5305251 5.7497944 10.4110705 -0.2159149 1.5913443 7.8091501 12.5531255 13.3662116 6.9286688 13.2440187 13.5140033 9.0259941 8.2678265 5.2102759 7.5488828 8.3270428 9.4844505 7.6388790 13.5286870 2.2434558 9.9867468 14.6199625 5.0319377 8.8284050 10.6188769 8.3500649 7.7726953 -0.2159149 14.3627868 9.5841019 1.7840014 6.6969008 1.1059462 4.1059378 9.7162256 10.4818473 9.6349791 10.6141299 9.8467316 9.4546672 2.2434558 10.8784185 9.4827156 6.5187208 7.5719134 1.5913443 11.9963552 14.6018439 6.9255046 11.5474307 11.2798658 9.3056113 0.7840014 0.3689359 7.1763288 8.9539360 11.3883324 NA 6.0319377 7.0832187 9.9601840 10.8741232 5.4422236 4.9934660 4.4844475 9.9775362 12.0357891 NA 14.2213078 6.5455622 7.7555546 11.1706817 11.6976483 12.9267561 7.0031794 11.4040015 11.2149860 10.9187965 10.7025015 4.6419910 8.9210018 11.9235622 12.1154877 NA 10.3149048 9.0647816 -1.2159149 3.4278609 8.7512371 10.5275831 10.3031556 8.5587980 15.1038241 10.3904161 9.3385998 6.4774976 2.1059462 15.5201881 7.7352954 11.8912279 11.2574629 10.4524526 9.7577082 8.0877917 10.0103447 -0.01587900 -0.01587900 -0.01587900 0.00319100 0.00319100 0.00000000 0.00152550 0.00000000 0.00000000 0.00104850 0.00104850 0.00104850 -0.00069303 -0.00069303 0.00470050 0.00470050 0.00875280 0.00083195 0.00083195 -0.57071000 -0.00110870 3.33140000 -0.00207840 -0.00207840 0.52083000 -0.00899060 -0.00899060 -0.00899060 0.00458000 -0.01587900 -0.01587900 -0.00304750 0.00319100 0.00000000 0.00000000 0.00152550 0.00152550 0.00000000 0.00000000 0.00000000 -0.00055444 -0.00055444 0.01056400 -0.53794000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.55417000 -0.54472000 0.00083195 0.00083195 0.00083195 -0.01106000 -0.00110870 -0.55707000 -0.57600000 -0.00207840 -0.00207840 0.00597000 -0.00899060 -0.00899060 0.52370000 -0.55146000 -0.57615000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7162255 13.2577166 8.3405169 9.1470505 4.1433199 11.3860137 1.7840014 0.3689359 8.5719134 7.9413575 NA 7.8311349 3.0319421 10.2279903 8.8105344 -0.2159149 7.8872986 10.4861835 11.0265896 10.9388290 10.3053119 7.0080128 11.4464567 2.1059462 10.5472232 9.4546672 4.8284031 -0.2159149 10.5759877 3.5388982 12.9528396 12.1283067 8.5422341 10.8392932 6.9688856 9.1260855 2.7840014 3.1059462 -1.2159149 7.7980311 9.0647816 9.7184389 10.6220329 4.8925367 7.0601350 6.6788283 9.9977226 5.0694143 10.8348798 1.3689918 12.8267817 2.6909087 5.3538667 10.1973372 6.5064084 2.8714691 9.1070656 7.6512892 6.0413985 0.7840014 14.2644224 0.7840014 10.2853504 NA 8.8886096 6.1503322 8.4078923 9.0682567 14.2691147 5.6419910 8.2393379 13.2440187 10.1373727 10.1677152 13.5286870 15.4511917 8.9327415 10.7741148 13.0368980 11.0443423 8.9539360 8.4792391 0.7840014 7.9413575 10.6388792 10.8484168 8.0531374 9.3153923 9.5280037 8.3192864 10.3912903 5.9132940 8.3424316 11.8455508 6.4350618 1.9539357 7.9861344 5.1647742 11.4766263 10.3834588 9.2808647 8.1633890 11.3289753 5.1763268 9.6349791 10.5157541 11.8780885 9.7367522 10.5388984 8.8820429 -1.2159149 7.8383436 6.7206492 5.0877895 10.8741232 7.4809784 10.4608494 9.9775362 6.8008197 14.5961631 10.3825287 10.2207223 12.8511090 10.1644719 9.1036831 -0.2159149 TCGA-A2-A0SV 63 1 825 NA breast stage iv t2 n2a m1 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 8 white not hispanic or latino 72.63.0 1 3 1 3 1 4 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 5.562279e-07 2.781139e-07 12.4268785 4.3600552 6.5668319 11.0823684 NA 10.0505764 -0.8298185 9.3269427 11.2017564 11.1414118 9.1105413 7.2497127 7.9630180 10.0797457 5.0405944 9.1702275 9.2112021 10.1807557 7.0920689 2.8706606 10.4599583 10.6332409 13.1958430 10.8678467 9.1624578 10.6750465 5.0771191 9.9967760 NA 6.5668319 8.1898181 9.7589422 12.4382578 9.2342965 12.7224764 12.8654558 10.3136108 5.8355629 3.3401492 6.5582447 7.7074461 9.4199336 7.6214387 12.2672721 1.3401634 11.1022577 13.5865633 1.8706606 9.8098667 10.7403204 4.8706656 4.8284386 0.7552294 14.6313218 9.6224688 -0.8298185 8.7803295 NA 2.2577046 9.2988663 9.9171617 8.8470661 9.6874047 8.2550361 10.0540164 -0.8298185 10.1388943 9.6327299 6.6090191 7.6439334 1.4921608 8.3148859 15.0532168 7.1226489 10.5601277 10.2790787 8.0589707 1.8706606 NA 8.3161598 8.8203816 9.9388255 0.1701815 5.8284386 7.2118863 10.1171338 10.1667010 7.2091463 6.3698992 5.7248167 9.4434403 11.6614543 4.1475102 14.0261423 7.0344138 7.1331237 11.2943488 12.7164588 12.2357278 6.9743584 10.4590937 10.4659965 9.6271313 10.3833318 3.8981503 8.7171219 11.4752918 8.6869126 -0.2448560 10.5340886 9.9670784 1.1702456 2.1943708 9.4422740 11.0436716 9.3269427 9.0838649 15.0917896 10.3426551 9.7329470 7.4853769 7.6540431 14.7389111 7.2708896 12.6287623 11.8140837 10.0616315 8.9775825 7.5560899 10.2084126 -0.222810 0.641390 1.239100 0.106830 0.109640 -0.204230 0.723380 -0.245330 -0.546330 2.849000 -0.556770 1.806000 0.090141 -0.573180 0.071248 0.071248 0.071248 0.000000 0.000000 -0.573000 -0.569120 -0.172210 -0.598080 0.089127 0.089127 0.052668 0.015899 -0.224900 3.656900 -0.249580 -0.222810 -0.106700 0.120380 -0.256990 -0.204230 0.055800 0.063795 -0.245330 -0.546330 -0.570830 0.083920 0.082909 -0.591460 -0.568330 -0.568330 0.083342 0.083342 -0.573180 -0.573180 0.071248 0.071248 0.000000 0.000000 -0.597500 -0.552560 -0.569120 -0.172210 0.104970 -0.598080 0.089127 -0.568830 0.052668 -0.224900 0.704760 -1.292900 0.028336 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.219 1.811 -0.568 0.000 -0.313 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.219 1.811 -0.568 0.000 -0.313 8.5657617 14.1827211 6.7514276 9.6219539 2.6627296 10.0868534 0.4921096 NA 8.8149852 8.9175812 NA 8.0772686 7.5189560 10.9654555 9.3563417 3.8140787 6.8068525 9.5084069 8.9433667 11.0260693 9.0368574 6.1981326 10.4811243 1.8706606 9.8311148 10.0540164 1.1702456 NA 10.8953808 2.0771062 12.7619252 12.2909514 7.8758599 9.2610016 11.0280142 9.4205260 5.0405944 2.7551867 -1.8298185 11.0402069 9.0157175 9.7612823 8.5700394 2.1702135 8.1572358 7.4228931 9.9767772 5.0771191 9.9379981 -1.8298185 10.7159160 3.1702295 3.6620801 8.9573139 7.8134343 1.7551867 10.1984789 9.1460755 4.6131721 2.0771062 13.6623311 -0.8298185 11.2163284 -1.8298185 8.8689321 3.0771233 7.5123020 8.1200543 12.416318 7.034414 8.447515 12.722476 9.312335 11.831560 12.267272 10.291113 9.535456 10.513136 13.289412 12.041074 8.820382 8.244369 1.340163 7.545267 11.936860 11.317432 5.799585 9.055924 8.345153 9.720974 10.332062 7.034414 8.677031 10.867847 7.083117 NA 5.579618 9.205906 10.644440 10.030927 8.371126 10.035574 9.194675 5.257690 8.847066 10.361904 9.878880 9.822176 10.563618 8.513413 1.492161 9.311626 7.643873 3.455636 10.166701 7.401449 10.531897 9.443440 6.915062 13.385078 10.616277 10.722657 12.902289 11.087040 9.156069 1.170246 TCGA-A2-A0SW 82 1 1365 NA breast stage iv t2 n2 m1 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 72.63.0 6 3 1 3 1 4 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.040709e-06 3.469029e-07 12.0016826 5.1333210 7.8720906 11.6592353 0.8113888 10.4525435 2.2708279 9.6748068 11.7417627 10.0521863 9.4507356 8.0545690 8.3563595 9.5092313 8.6331689 9.4820512 10.1551358 10.4611002 7.4075847 4.8988565 11.3067503 9.8761377 13.8482125 9.1479014 9.8571546 10.8808447 8.5579094 9.8240195 0.8113888 -0.1885290 9.8302905 11.5917296 11.6255768 8.2122746 10.3693372 13.3395438 9.5005193 5.6187496 1.3963787 6.4038522 9.0933249 9.7728447 6.7713970 12.5406970 NA 10.1853476 11.9570087 3.3349544 9.5350901 10.6615818 6.2543389 5.4696060 0.8113888 14.9172546 10.1601065 1.8113888 7.4767308 NA 8.0353968 9.1117476 10.4284032 8.8666774 10.1923970 9.5737771 9.8014988 4.4552483 11.3619012 10.2584782 4.8988565 8.3831474 2.2708279 10.3236416 14.9022103 9.4718187 10.5837096 9.8000797 8.7958134 0.8113888 NA 6.9199192 8.3659838 11.3638239 -0.1885290 6.1777165 7.3850418 9.0341898 11.0311685 5.8882099 7.2830698 5.8337630 9.4952668 11.9192658 4.8557904 13.1540252 4.2708279 6.6505994 11.4729504 13.4257022 12.7832977 5.6817585 10.3388720 10.7688598 10.1681110 11.3263555 4.3659864 9.2564097 11.4389288 10.1157462 NA 10.0851905 9.1523576 1.6187555 2.8826430 9.3359367 10.5222013 9.5031384 9.0244992 15.1831716 10.6859922 9.9061324 8.5273570 2.1333334 14.2311247 9.3935370 12.2338540 11.2173342 8.6631439 9.9074512 7.7212879 10.5346591 0.2336500 1.0136000 0.4961400 0.0062481 0.0114000 -0.0022168 0.5271300 -0.0136770 -0.0046477 0.5095000 0.5095000 0.5362600 0.5067200 -0.0250720 -0.0081624 0.5222300 0.5222300 -0.0030475 0.9856400 -0.5967800 0.5422400 -0.5437100 -0.5619600 -0.5619600 0.7092600 -0.0179410 -0.0179410 -0.0179410 1.0146000 0.2643500 0.2336500 -0.3594300 -0.5559700 -0.0022168 -0.0110590 -0.0056757 -0.0094046 -0.0136770 -0.0046477 -0.0069195 0.4980500 0.5283600 0.5095000 -0.5690200 -0.5690200 -0.0202860 -0.0099565 -0.0147780 -0.0205490 -0.0137070 -0.0132640 -0.0030475 0.5032500 -0.0369460 -0.5377400 0.0050795 -0.5728900 0.0917350 -0.5619600 -0.5619600 -0.0283550 -0.0364010 -0.0179410 0.5281800 0.0054139 0.0079175 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.404 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.404 9.5579092 12.8060135 7.4588536 8.9001830 3.3963513 11.0347933 1.3963787 -0.1885290 9.1231432 6.8000793 -1.1886934 7.5198579 0.8113888 10.6982346 9.6155259 2.8113888 9.8351493 9.5057528 9.5721149 10.7908202 9.9440682 7.5960294 10.4891146 1.9813047 9.5902934 9.8014988 0.8113888 NA 10.9601893 0.8113888 12.5735693 12.9937893 7.0734893 9.4758422 9.9419655 9.7750135 8.5494871 3.2037180 -1.1886934 0.8113888 8.8337626 10.4877928 10.8410273 4.2037102 8.9004216 7.1467855 9.3944777 5.7886753 10.4316148 -1.1886934 11.1106030 3.8557904 3.3963513 10.1741990 6.1569325 9.9015074 9.4251844 9.6098667 11.8011442 1.1333005 13.9243231 0.3963787 10.9922365 NA 7.5256406 4.6940388 9.1254117 8.0012196 11.962191 6.403852 9.146785 10.369337 10.096179 11.236873 12.540697 10.059322 9.421091 10.170595 12.856131 8.522201 8.365984 7.448020 3.203718 7.721288 10.957645 10.4584035 7.9962701 9.2533017 5.2207865 7.9458213 10.4514636 7.7684967 7.0545685 9.1479014 8.4425720 -1.1886934 4.6187496 8.9012558 10.3236416 10.6086512 8.1534694 8.9146826 9.4722822 9.9894372 8.8666774 11.1601231 10.3515230 9.9869445 10.7854510 8.5528620 0.3963787 9.7478120 7.8254155 10.4001095 11.0311685 7.4767308 10.5692016 9.4952668 8.0995456 13.5075475 10.8693866 10.8053948 11.7423170 10.9319568 9.1645417 5.6940388 TCGA-A2-A0SX 48 0 NA 1534 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.006051e-07 1.39057e-07 12.10227662 6.94243123 7.39189829 12.81604441 -0.05379317 10.33277461 0.36120689 10.11486568 12.13756125 10.34422466 10.08446534 8.55721822 9.15076477 9.61802937 6.08233003 9.33994150 10.11570110 10.74006777 8.91581994 5.99785465 10.88968518 11.26699409 12.54447872 11.39396560 9.47367065 10.99286287 8.25756369 9.93156118 3.40562483 2.16857786 10.31069298 11.76304389 13.88092873 8.32123318 12.04027126 12.21219921 9.80417459 7.06167037 3.60916396 10.04816928 8.58039953 10.72755327 7.46975576 8.34991590 2.53114437 13.24964137 9.65009712 9.77908354 9.77440410 10.93369442 8.21141770 3.71877807 0.94620683 14.53564672 10.57555021 2.75354036 9.06686335 5.25604825 6.31542675 10.04816928 10.74763244 9.22619108 10.78145447 9.58583574 10.24310982 3.21921500 11.89699244 12.24234503 5.37245765 8.03365646 0.94620683 9.00057189 15.09473634 8.36460832 11.22986072 11.11820429 10.08531855 2.26813492 -1.63890543 10.21609941 10.08019196 10.23236624 2.16857786 4.31542856 7.37525147 11.72960112 11.43252582 6.77062161 8.11110071 7.28604389 9.45992111 12.03354589 2.53114437 13.21663489 3.71877807 7.61625991 11.58085338 14.00412889 13.24654612 7.35558455 10.01228275 11.02900791 10.57421071 12.02412191 4.83696430 8.34707297 11.96358195 9.22773723 NA 10.14095039 9.57615722 2.44868955 4.08151007 9.75247465 12.16101857 10.69522490 8.95648855 14.24420838 10.33025777 9.96439372 8.44337997 4.40562483 12.38974151 6.44869451 13.88892186 12.00463632 9.72207815 10.01541951 8.29492166 10.46417130 0.097996 0.583920 1.397900 -0.420390 1.308000 -0.403890 -0.300000 0.024917 0.048919 -0.262920 -0.262920 0.382640 0.146910 0.146910 -0.181030 -0.120090 -0.120090 0.023336 0.000000 0.174470 -0.154560 -0.419630 -0.123100 -0.118820 -0.116960 0.639680 1.534600 0.065460 0.728040 0.106960 -0.037176 0.154660 -0.421710 0.425470 -0.329290 -0.588760 -0.287550 0.024917 0.048919 0.018290 -0.459540 0.148100 -0.489380 0.468210 0.488480 -0.124650 -0.124650 0.146910 0.137310 -0.263300 -0.445490 0.023336 0.000000 0.000000 0.089618 -0.154560 -0.093716 -0.092262 -0.123100 -0.118820 -0.402560 -0.574510 -0.524430 0.148850 0.102290 -0.430000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.489 0.102 0.344 -0.125 0.000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.489 0.102 0.344 -0.125 0.000 10.06599929 13.71551487 5.95368895 9.80106195 3.61598121 10.93440482 5.23159753 6.18141070 8.66729289 9.97317802 7.71658216 10.05745961 6.28009519 10.58070214 9.98556959 3.60916396 10.56090340 10.03939108 8.45794635 8.66729289 8.60551174 7.63269427 11.29326121 2.60916396 9.19728133 10.24310982 3.31542132 NA 10.63677359 4.00508554 12.44179878 12.25339437 8.25453263 10.41888439 10.78092791 11.01832615 6.87693066 2.82066914 -0.05379317 2.60916396 9.28381554 9.08744932 8.20672087 5.15564805 5.74493607 6.44869451 10.21219918 3.82065893 9.75783583 0.68320237 12.75482261 4.42731787 4.64663503 9.21869884 5.37044330 8.75997471 9.97640087 9.02300911 10.43704439 9.75730066 13.85783521 0.36120689 10.64026121 4.29197185 9.53490824 4.00508554 7.80831425 7.96856139 13.144691 9.095094 7.789591 12.040271 10.571598 11.241006 8.349916 11.083398 9.159703 11.429673 14.334233 11.693687 10.080192 8.212980 2.168578 7.689906 11.333672 10.9480708 5.2067214 9.0976329 9.7843469 8.9978558 10.6381638 8.5559879 6.9869399 11.3939656 10.9461935 2.4486896 6.1621315 9.3457634 13.5646555 10.8031377 8.4956572 8.6055947 9.5633549 9.2215422 9.2261911 10.4553087 12.7805988 12.8887081 10.9515842 8.8145017 0.6832024 9.4472942 7.6798643 10.0547180 11.4325258 7.5135160 10.7852949 9.4599211 8.0426274 14.1082174 10.5358447 10.0555890 12.8130217 11.0711764 9.7313735 5.5706845 TCGA-A2-A0SY 62 0 NA 1347 breast stage iiia t3 n1 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma no 1 white not hispanic or latino 72.63.0 8 2 2 3 NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.913984e-06 9.019475e-07 11.07607068 9.42585558 6.96678920 11.53083791 -0.52097644 9.61722115 -0.52097644 9.48106095 12.06167931 10.27051913 9.53964525 7.81879944 9.20090277 8.70053647 7.70536145 9.21281200 10.64856116 9.92603249 7.64134082 4.85399066 10.27051913 9.92964500 10.21830797 11.80832515 9.94451574 10.68565839 6.80087790 10.40264811 3.64887955 1.28628976 9.05732192 10.74221848 12.96923609 7.81657091 14.65108373 13.34637281 9.94094017 5.23383822 2.56640116 7.15137482 8.18975588 11.19833809 7.16894684 13.59841730 1.64887955 10.65574573 13.69300271 4.92189329 8.16166300 10.70896970 9.15666889 5.03353753 NA 14.04854710 11.75750181 2.72687480 8.61080635 NA 4.68840419 9.92861386 10.31183923 9.64322776 12.45452858 10.09825216 10.08072001 1.47897181 11.28408851 10.20004843 7.68107322 7.79183230 9.62679009 11.40820765 14.87202124 8.42251895 10.59691698 11.04286051 8.79183230 1.64887955 3.68840419 8.11012621 8.77701197 12.20261022 NA 5.12280522 6.56641181 10.04405130 11.24609920 6.07140658 6.71735427 4.97080305 10.64887425 12.40004634 0.06391705 13.97377361 5.94655542 7.31815322 12.51546634 11.64542620 12.71600981 7.94042871 10.42109714 11.01422465 10.79106641 11.01227898 4.93837990 8.45192898 12.08454453 12.90998975 0.06391705 10.33498563 9.03641294 1.28628976 3.35325271 9.23717243 10.58158117 10.24340620 8.62996563 14.85979923 10.28992251 9.54167009 7.59789016 5.26030799 16.47270035 9.70114043 13.71047047 12.40459641 10.21111675 9.83374968 8.20686980 10.79627709 -0.00588010 0.62702000 0.63536000 0.00000000 -0.01230000 -0.01050800 0.01922100 0.00441480 -0.01009400 0.00930980 0.00930980 -0.00923180 0.01307400 0.01000600 0.00638710 0.00638710 0.00638710 -0.00650500 -0.00650500 -0.00193990 0.00263570 0.02146300 0.70326000 2.86080000 0.00597000 0.01153900 0.01153900 0.00970630 0.02482900 0.02988800 -0.00588010 -0.00373950 0.00000000 -0.01050800 -0.01050800 -0.01409000 -0.01409000 0.00441480 -0.01009400 -0.01009400 -0.00421700 -0.00526100 0.00930980 -0.00025184 -0.00025184 -0.00025184 0.00652620 0.01000600 0.01000600 0.00638710 -0.67947000 -0.00650500 0.00249690 0.00249690 -0.00193990 0.00263570 0.01659000 -0.66541000 -0.66504000 -0.65594000 -0.70603000 0.01153900 0.01153900 0.02482900 0.00841480 0.03646600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7125690 12.8163621 8.5396451 10.0464301 5.1083070 10.7807312 4.5664133 2.1793837 8.7005365 8.0469052 1.6488796 8.5493118 4.7827283 10.0176233 9.4740097 2.0639171 10.2623568 9.1991936 11.6810731 11.1048863 9.5466526 7.4389515 10.6479347 3.5233487 7.4067271 10.0807200 4.8187994 NA 10.6223325 2.6488796 13.0546658 12.2696032 8.4316906 10.2367559 7.9322201 9.2838868 6.1371613 0.8009103 -0.5209764 5.3493157 9.0248790 9.7637734 10.5134044 6.1442850 7.0219816 6.1010008 9.7357476 4.9867431 9.7872883 NA 11.1409500 1.8008688 4.1228052 9.9631075 5.4224012 6.2271423 9.4411224 9.3615923 10.2810617 NA 14.6003007 1.6488796 10.1961972 -0.5209764 7.9301601 5.8712670 7.7386929 9.2822732 13.386779 4.938380 8.447616 14.651084 10.316037 10.686879 13.598417 12.235818 9.169820 10.629649 13.197857 11.194053 8.777012 9.220416 2.063917 7.048805 10.615940 11.21809699 7.18630840 8.77357014 8.96276503 7.59786410 10.50034228 7.75739868 7.71974064 11.80832515 7.04500276 0.47892005 6.91357759 7.01709903 10.65325084 10.25332455 7.71017068 8.30708557 11.98884794 6.61337547 9.64322776 10.54167000 10.94502575 9.58943262 10.43387260 8.60307067 0.06391705 8.84851403 8.48816189 8.63503243 11.24609920 6.59269174 10.48991086 10.64887425 7.10465850 15.07222366 10.19104626 10.20346314 12.33644435 11.05708603 8.86911816 3.28630455 TCGA-A2-A0T0 59 0 NA 533 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.128144e-06 1.006018e-06 11.77634860 -1.60999274 7.10102284 11.20559998 NA 10.18666199 NA 9.15922803 10.71495982 7.46435787 8.75981397 7.63100822 9.14760664 9.44142559 5.36749688 8.83316018 9.56264426 10.39619203 8.51045443 7.70988888 10.07671714 11.69755982 12.84849511 9.92889066 9.71158111 10.74419053 5.68483837 10.62802415 -0.60977256 -0.02488345 7.30907976 10.19434775 11.75653889 6.76525626 11.73908314 11.48280866 9.01043663 5.80806836 1.71215553 8.10274368 9.61301165 8.73673035 6.72560757 8.93807521 -0.02488345 10.18015781 12.19716901 6.56014174 9.08232657 10.41501010 6.58988930 5.03407482 -0.60977256 12.88756396 11.34985642 1.56012798 9.80648647 0.39022744 3.03407482 8.39162468 9.36678074 9.53932867 11.04530010 9.93179739 9.67561889 -0.60977256 10.72783862 10.30310604 5.44549829 6.18463339 0.71211150 7.63814409 14.80303458 6.51314803 11.18137958 10.41327790 9.98687237 1.39022744 3.59967485 8.30758882 9.08892124 10.71552217 6.09065657 6.64760521 7.01592569 8.77715699 9.38810191 7.38457051 5.87403214 4.41258509 10.18463252 12.30963869 -0.02488345 13.03373470 3.67562401 4.56014021 10.87705172 14.81847869 12.43264556 7.09411992 10.52400107 11.08021468 10.76974670 10.02048387 3.39021368 8.08196004 11.28162065 7.48824907 2.47767733 10.06440893 9.13840953 2.97517159 2.73576044 9.27056538 11.47784527 10.73949786 8.67792890 14.93676452 11.01820644 9.57385203 5.73006657 2.39022744 14.17126897 6.49350484 12.48429437 12.04853977 8.99754702 9.62802406 7.09065657 10.08030630 -0.55917000 0.50168000 0.77868000 0.01028500 -0.02205800 -0.00387790 0.02806000 0.72263000 0.52853000 -0.00484610 -0.00484610 1.48410000 0.99509000 -0.55717000 0.50099000 0.00083195 -0.00526100 -0.55367000 0.55904000 0.47959000 0.03157700 -0.54875000 0.00249690 0.00249690 0.71340000 0.47152000 -0.00415460 0.20660000 0.01391100 -0.56634000 -0.55967000 -0.00774820 -0.53987000 0.00194180 -0.58235000 0.01460200 -0.57130000 -0.56396000 -0.02109800 -0.57704000 0.02974700 0.00000000 -0.56618000 -0.55607000 -0.55607000 0.01883300 -0.58706000 -0.86192000 -0.57910000 -0.61949000 -0.00526100 -0.55367000 -0.55595000 -0.54784000 -0.04888300 -0.55587000 -0.03607400 -0.56753000 0.06436800 0.00249690 0.00972760 -0.04820700 0.20660000 0.01106600 -0.00318590 0.39330000 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.409 -0.556 0.000 -0.316 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.409 -0.556 0.000 -0.316 7.14176077 13.31632732 3.78253438 8.79854632 NA 10.96030956 -1.60999274 7.18463239 9.51692108 9.32906124 -0.60977256 7.85241215 1.39022744 10.91304340 9.62323716 1.39022744 3.97518076 10.24157530 6.90196984 11.39373457 9.03796282 6.69855605 11.10767891 -0.60977256 8.32685459 9.67561889 -0.02488345 NA 10.27285976 2.63814336 13.39193273 11.66415792 7.19434811 9.40493462 6.96386365 10.31391561 2.84963904 0.97518994 NA NA 9.71045312 9.23570672 9.19030768 1.19755091 9.43568964 7.51433770 10.02593476 6.46167916 10.69399739 3.39021368 13.21567239 2.47767733 2.84963904 10.81174243 6.47353692 3.47767733 9.53551198 7.40423726 5.28503595 6.67098759 13.18351516 3.88206586 11.39531488 -1.60999274 9.82380205 3.63814336 9.30982488 8.30460185 11.656620 8.178119 8.672147 11.739083 10.211604 12.205300 8.938075 10.009061 9.494160 9.754351 13.076279 13.280101 9.088921 8.980804 2.849639 8.298609 11.543769 11.0663942 2.9137798 8.4656958 8.6756187 8.9562707 9.4401809 6.1384090 3.9137798 9.9288907 5.9448046 3.6381434 7.3001100 7.7676224 11.6459829 10.5654543 8.2774371 9.4542857 8.0502127 4.8331583 9.5393287 9.7200130 9.9404825 11.2478090 10.7383916 9.0705761 2.4776773 9.5107203 6.2544032 4.4563068 9.3881019 7.1215356 10.2563364 10.1846325 7.7300666 13.7309013 10.0670553 10.6999772 12.4545384 11.2916493 9.2644297 -0.6097726 TCGA-A2-A0T1 55 0 NA 521 breast stage iiic t3 n3 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 10 american indian or alaska native not hispanic or latino 72.63.0 6 3 2 5 1 5 2 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.946798e-07 1.39057e-07 11.3824608 7.4318018 7.9451231 11.4832912 -1.4169624 9.8071809 -1.4169624 9.4673496 11.4660132 7.8287318 9.1951261 7.1868056 8.9614740 10.2193507 5.7021200 9.4802684 10.4742034 9.7001728 7.6166025 7.7379970 10.3808407 11.4101248 12.5599223 9.8988949 8.7568562 10.3355599 8.9765696 10.2042603 -1.4169624 1.9051198 8.9861913 11.0444028 12.0334883 7.9096087 17.1808426 11.0949318 9.8685814 2.6706364 NA 6.7480855 8.3497081 4.4658243 6.7329258 12.1567080 2.6706364 11.7272000 11.6277441 8.2467373 9.5148844 11.1121216 9.3017120 7.5286229 1.7530910 14.8286169 12.9866686 2.1681285 8.8697369 NA 7.0343907 9.7150362 10.6646627 9.4681128 9.4938218 9.4832912 10.3901315 1.7530910 11.1020782 10.2006467 5.8215827 7.2198036 2.1681285 9.2207096 15.5561029 6.2519217 11.0235293 10.1344068 9.4419372 1.3905576 6.0507846 7.9647221 8.6956188 10.6808822 -1.4169624 7.6330279 7.5604589 9.9941605 10.5344639 7.3212715 7.4596964 6.1681426 9.5249605 11.2400509 -0.4167698 14.0068204 6.5999872 7.2939856 11.7123012 14.3338077 12.5638543 7.0750320 10.9067970 10.8373220 9.8937919 10.7458852 3.3380678 8.4885660 11.3159826 9.3985624 1.3905576 10.5739923 9.7846905 1.3905576 2.7547165 10.1145607 11.1351277 9.5511259 8.3280129 15.4678744 9.7593523 11.0094439 6.8777995 2.6706364 14.3888475 10.4333660 12.4953200 11.4921346 9.4719225 9.1415999 7.7901934 9.7305877 -0.0556340 -0.0556340 0.1640000 0.0708850 0.1717400 3.5601000 0.1134500 -0.0082211 -0.0089906 -0.3888400 -0.3848100 0.5958400 0.1293300 0.1293300 0.1630900 0.1630900 0.1630900 -0.0103370 -0.0078863 0.0221640 -0.0092868 0.0049969 -0.1026300 3.6569000 0.0892720 0.0659420 0.0659420 0.0659420 0.0983120 -0.0556340 -0.0556340 -0.0029091 0.0398350 -0.1941200 -0.1829500 -0.1172900 -0.0045695 -0.0082211 -0.0089906 -0.0089906 0.3543000 0.3508800 -0.3858900 0.1685000 0.1561600 -0.1899000 0.1670000 0.1293300 0.1293300 0.0000000 -0.1907400 -0.0103370 -0.0078863 -0.0118250 0.0221640 -0.0052610 0.0049969 -0.1932500 -0.1026300 0.0892720 -0.0116110 0.0659420 0.0659420 0.0983120 0.7750200 0.2415600 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 -0.141 -0.141 0.000 0.000 0.000 0.000 0.270 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.191 -0.191 0.000 0.000 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.000 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 -0.141 -0.141 0.000 0.000 0.000 0.000 0.270 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.191 -0.191 0.000 0.000 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.000 9.9516857 13.7854943 5.2556027 10.0492557 6.0426115 11.2661737 2.1681285 NA 9.1387269 8.7593523 NA 7.9363258 8.1203976 10.5543634 8.9776420 1.7530910 10.3484653 8.9851252 10.2396040 12.0755331 8.6650754 6.8915176 12.0876258 2.5831821 9.2740501 10.3901315 3.5373706 -1.4169624 11.2982832 1.3905576 12.5736377 12.5675086 8.3178888 9.6533001 9.3355599 10.0415858 1.1681285 3.3905301 -0.4167698 7.4442662 8.7816243 10.0250858 10.0929541 5.2270363 8.2189337 9.2449572 9.5540040 6.9495011 9.2270354 -0.4167698 9.7987122 3.5831821 3.9754926 9.5652316 6.9104173 8.4192296 10.2814497 9.9652628 10.8316998 2.7531124 13.3783057 1.5831821 10.2723035 NA 9.3856955 4.9051054 7.2161745 8.2661737 10.658053 5.338068 10.461230 17.180843 9.657321 10.584235 12.156708 9.064978 9.392143 10.051803 12.646153 9.283619 8.695619 7.886960 4.390537 7.034391 10.872910 11.824716 4.583182 8.792633 8.807181 8.786809 10.849837 8.416069 6.831107 9.898895 6.882387 1.583182 9.207061 7.438235 12.278299 10.901157 7.393751 9.834662 9.038506 9.245848 9.468113 10.314498 10.652629 10.556159 10.914936 8.537376 6.873198 9.674714 7.651232 9.257371 10.534464 6.831107 12.092954 9.524960 7.022179 13.623555 10.599987 10.241837 12.220823 10.615914 9.600684 4.773005 TCGA-A2-A0T2 66 1 255 NA breast stage iv t3 n3 m1 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 10 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 1 2 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 4.171709e-07 2.224912e-07 11.5586579 3.0824982 7.4639273 11.6733804 -1.1655315 10.3737292 NA 8.5539591 11.7463369 9.1542424 9.4419007 8.3443452 8.6800606 11.1054497 6.3264241 8.1744204 9.0931365 9.8548559 7.4344831 4.1565018 10.6228809 11.7498896 13.0165767 9.6491529 8.8652374 9.8492883 4.8118512 10.3354122 -1.1655315 1.6419159 6.7474599 9.9404789 12.4642685 5.9326022 11.9031807 12.3452110 11.4916655 7.9843176 4.3581290 9.2085231 8.7519423 7.5522472 6.2268880 3.3581290 NA 13.7985953 11.9388415 10.2681559 10.5342773 10.5276217 7.5794042 7.9689968 0.4195389 13.7538998 9.0693877 2.5350078 8.9060328 NA 2.9220265 8.3163698 9.3561709 9.1621229 10.6253261 8.4326229 9.3042121 0.4195389 11.2993713 10.4851734 6.6289864 6.6547491 3.4195389 3.4784283 14.8569382 6.1848020 10.5641911 9.4520377 9.0379184 1.6419159 NA 5.5488157 8.9919172 11.2650229 -0.1653697 4.0824982 8.0753615 9.6142897 8.9233587 3.6925499 6.3423645 4.2940031 9.1257410 11.5195381 3.2940031 13.2561750 5.7049356 6.1383517 11.3244183 14.7235514 11.9215359 6.8118499 10.7822073 11.7998135 10.9130548 10.6547493 3.6925499 8.1429096 11.8186327 8.6658777 NA 10.5505324 8.8789644 3.1564937 3.7429009 8.9715614 11.0320942 9.3669263 9.3113167 15.7940630 9.9535114 9.5768798 7.0537391 2.2939884 11.7303350 8.6894386 13.0326317 13.3850166 9.9140551 10.4954576 7.5105276 10.7308649 2.9355000 2.7996000 -0.0317680 -0.0257560 1.2730000 0.0000000 -0.1185800 1.2526000 1.2526000 1.2456000 1.2456000 1.2456000 3.3495000 1.2161000 1.2254000 -0.0418290 -0.0418290 -0.6627200 -0.0027707 -0.0195160 -0.0291790 1.1481000 -0.0415670 -0.0415670 -0.0415670 -0.0276710 1.2210000 1.1624000 1.1839000 1.0960000 1.1030000 -0.0086008 -0.0217840 -0.0770780 0.0000000 -0.0210980 -0.0210980 1.2526000 1.2526000 1.2535000 1.2257000 1.2504000 1.1495000 1.2125000 1.2237000 -0.0305400 -0.0456730 -0.0373540 1.1868000 1.2254000 -0.0399370 -0.0321740 -0.0052967 -0.0463650 0.0072217 -0.0291790 -0.0614200 -0.0903420 -0.0415670 -0.0415670 1.1807000 -0.0257560 1.2210000 1.1932000 2.0158000 -0.0748110 2.213 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.180 0.000 0.000 0.000 1.165 1.165 0.000 1.162 1.112 1.112 1.193 0.000 2.016 0.000 1.229 0.000 1.270 1.270 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 2.213 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.180 0.000 0.000 0.000 1.165 1.165 0.000 1.162 1.112 1.112 1.193 0.000 2.016 0.000 1.229 0.000 1.270 1.270 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 7.4455951 12.9750807 2.9220265 8.4748152 1.9572460 11.9890721 -0.1653697 7.8679934 9.2182748 9.0513164 1.4195389 6.7829379 5.6289864 10.4363411 8.6737741 0.8345494 5.8232551 10.0954899 9.0317872 10.1666069 8.4540385 7.0488890 11.8276857 0.8345494 7.0681903 9.3042121 1.4195389 NA 10.5886227 2.1564937 13.0587228 13.1989103 7.6674607 10.4015758 8.6483515 10.0937251 5.6547506 2.9220265 -1.1655315 -1.1655315 8.7248348 10.4566222 7.8652378 2.5350078 9.9253510 9.2193542 9.6964328 6.2775143 9.1598759 9.3284259 10.6867097 0.8345494 3.7414562 10.7346824 7.4549737 1.1565261 9.8686815 7.2225872 4.8569359 11.2608351 14.0310188 3.6925499 10.4784265 -0.1653697 9.6167495 5.0243950 8.7593829 8.0268631 10.6019148 8.6515540 8.1406319 11.9031807 9.8039569 10.5718178 3.3581290 10.1036971 8.7712082 9.9286481 13.4128841 9.7110874 8.9919172 7.5726623 0.8345494 7.0729751 11.1423404 10.482029 4.192123 9.451119 8.560789 7.029327 9.414263 5.342366 7.478427 9.649153 10.380983 NA 9.463016 7.850543 11.343603 9.961275 7.554438 9.659529 7.396813 3.741456 9.162123 10.218814 11.546882 10.531538 10.430760 7.932602 -1.165531 8.476586 6.243962 3.641927 8.923359 4.922031 10.134923 9.125741 7.702189 15.024877 11.013857 9.621657 11.953998 10.622473 8.289898 2.641916 TCGA-A2-A0T3 37 0 NA 569 breast stage ib t1c n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 85.58.0 3 2 1 NA 3 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 2.503025e-07 11.5398471 5.8377415 5.6883622 12.2580346 0.6439485 10.4558252 -0.6780719 9.9135631 12.0014109 8.1099435 9.8933194 7.6484705 8.6574310 9.4048552 7.9404264 8.7175750 10.9119260 10.4991489 6.9182300 2.6439716 10.3691647 9.6696621 14.0677677 11.7812163 9.3975200 10.8662808 3.9944621 10.7306359 0.6439485 2.4094996 7.0224810 11.3850988 12.7075662 7.8018209 12.6290281 12.3098377 8.8937936 7.4894586 4.6074428 4.9658951 9.0337077 8.5770692 7.0050350 12.5578307 NA 11.3023589 13.2549937 3.9658951 9.4532418 11.4852188 7.2704084 6.0635073 0.3220435 12.9063745 9.2907075 2.5699771 8.4590320 0.3220435 3.7483002 9.7778817 10.6801425 9.6529577 10.2733255 10.1091272 9.9582122 1.7814856 11.5892664 11.3061032 6.5747055 8.2000918 3.4919685 11.8362617 14.2924613 8.4939307 11.8029572 10.8945042 8.3318695 0.9069675 6.0769289 8.0465549 9.0827609 11.6578498 -1.6780719 5.2645552 6.8258670 10.7729943 10.8730280 6.3444078 5.2645552 3.8766250 10.3437148 12.1060621 4.1033969 13.3998579 3.7143554 7.1893195 12.4184266 11.6802799 12.9029471 7.4666989 9.2572058 10.8458478 10.8156436 11.4317082 4.9658951 8.6905473 11.5511600 10.6754634 -1.6780719 9.8861903 9.7148949 -0.6780719 3.3224906 9.1438148 8.7143582 10.3877935 9.2755097 14.7950647 11.0735849 10.7814724 7.9200932 1.4919557 16.1798761 10.6638375 12.9177062 13.0347290 9.6773920 9.3691648 8.6707688 10.2947191 -0.0254830 0.6441400 0.5983600 -0.3513300 0.3210900 1.4653000 0.3448600 -0.3586300 -0.3411300 2.8821000 0.6198800 1.2657000 0.5670300 -0.3484700 0.9119800 3.6569000 -0.3775200 -0.0256200 -0.0250170 0.0183830 2.1119000 -0.0412090 -0.1141700 0.4602400 1.8520000 0.3933000 0.5547800 1.4281000 1.9870000 -0.0254830 -0.0254830 -0.0711360 -0.3513300 -0.7958600 1.4576000 -0.0332690 -0.0332690 -0.3586300 -0.3411300 -0.3803300 -0.7021700 0.9277200 -0.7602100 0.6443300 -0.0444150 0.5827400 0.5708500 -0.3484700 -0.3493900 0.9119800 -0.3775200 -0.0256200 -0.0250170 -0.0250170 0.0183830 0.5807700 -0.7313400 -0.0818710 -0.1141700 -0.2162700 -0.0059522 -0.2511600 1.4281000 -0.3740300 0.5661400 -0.1101100 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.581 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.161 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 -0.712 1.461 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.581 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.161 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 -0.712 1.461 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 7.83774082 13.38189223 10.54634399 10.19663802 3.16803223 10.62124887 2.84561048 0.32204351 9.22742774 7.99092594 NA 7.81297177 1.32204351 10.50536608 9.59525356 1.64394852 6.92566718 9.51925745 9.71435818 9.46797290 8.76434151 8.51309986 10.83231045 -0.09295553 8.83379331 9.95821223 4.55085758 NA 11.52293941 3.74830021 12.04260573 12.26308841 7.61895733 9.18002177 8.10340060 10.68014253 4.29931793 0.90696754 -0.09295553 2.78146463 8.67959270 7.95139721 9.56996836 4.51186648 6.26338189 4.58882855 10.79219122 5.27623609 10.86241102 0.32204351 11.51725920 4.45132323 6.76083303 8.93186592 5.54507567 2.64397160 8.32626139 7.05675042 6.32204170 2.64397160 12.90735549 0.64394852 10.73487522 NA 7.44098209 4.12939843 7.56996798 8.89758018 15.723540 7.648470 9.358901 12.629028 10.330329 10.513100 12.557831 11.222530 8.556858 10.917065 12.743317 11.782113 9.082761 6.990925 1.781486 8.692728 11.884641 11.5410580 6.8138940 8.7711893 8.7143582 9.7737671 10.6964528 5.0769267 10.6735322 11.7812163 7.9604770 1.3220435 6.4409821 8.5430960 12.8408169 9.7089811 10.8548837 9.6275326 11.5851633 4.6258199 9.6529577 10.7608327 10.1481921 9.5693751 11.3341415 8.9376704 1.1294149 9.2514694 6.8495177 4.5314938 10.8730280 7.0668749 10.8876189 10.3437148 8.0051406 13.3184702 10.0702337 9.7947317 13.0428729 10.9105212 10.2871035 0.9069675 TCGA-A2-A0T4 62 0 NA 624 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 72.63.0 8 2 1 3 3 2 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 5.840393e-07 1.668684e-07 11.34256169 9.09565046 6.20348505 11.22394045 1.28699940 9.34662298 0.55001409 9.66898352 11.21360063 7.81682879 9.44687942 7.23186629 8.73986700 9.51582676 6.04189566 9.41422857 8.76921105 9.68189951 7.46093501 5.88394333 9.09950641 9.98744778 10.75868335 11.46691720 9.16106737 10.30826576 6.48078051 10.34337484 NA 2.87196190 9.06967881 11.98206237 12.84006135 8.89877066 12.99815883 12.90070550 10.31214770 7.17453326 3.87197175 7.78525890 8.41422857 6.72663098 8.16965096 12.56743091 0.55001409 10.65856693 13.90383260 5.21300893 9.33722672 10.43370404 9.79717887 5.03117020 0.96510086 13.82515872 10.62061069 4.63750592 7.67243949 NA 4.32263484 9.42860430 10.28700806 9.65070479 10.90392446 9.01083969 9.90465916 6.44889600 10.69894275 9.82383819 5.32263124 8.47485498 2.28699940 9.84848696 14.52711370 6.96963748 10.89470827 11.02002340 8.17696847 -0.03489914 5.66552068 8.70991368 9.14871527 10.83197254 NA 5.84772387 7.22717501 10.88692092 11.22746854 8.47880763 6.14498855 5.17453425 10.01083969 11.96173003 3.82305637 13.93971867 5.48864354 7.43675484 11.77825996 13.29045575 12.59568843 8.75949576 9.86971459 10.66768558 10.16045221 10.19209415 3.96508239 8.30270198 11.88673501 11.81663386 0.96510086 10.53303610 8.71327274 -1.03504695 2.66662027 9.21537841 10.38767046 9.93374686 8.95234405 15.47502508 9.89803296 9.64807459 6.84772262 4.17453425 15.50234392 8.49255704 12.65092383 11.95163318 10.10527068 9.51870941 8.19149208 10.39108266 -0.50266000 0.51385000 0.51385000 0.00722170 0.00467120 0.00055459 0.00624810 -0.51074000 -0.51146000 0.00423500 0.00423500 0.00423500 0.00610900 0.00610900 -0.00581400 3.65690000 3.65690000 0.00000000 0.00000000 0.01014600 -0.01285100 -0.01945200 0.01173200 0.01173200 0.01028500 -0.00315840 -0.00221680 -0.00221680 0.01476900 -0.50266000 -0.50266000 -0.00443120 0.00722170 0.00055459 0.00055459 0.00624810 0.00624810 -0.51074000 0.05779600 -0.51280000 -0.00041585 -0.00041585 0.00423500 0.01195800 0.01195800 -0.00374990 0.00680440 0.00610900 0.00610900 0.08189900 -0.50173000 0.00000000 0.00000000 0.00000000 -0.50318000 -0.00722000 -0.02971300 -0.50380000 -0.50277000 0.01173200 -0.49830000 -0.00315840 -0.00221680 0.04755200 0.01126100 -0.22392000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.50132728 13.49310672 8.88543282 10.40127100 4.21300504 9.65507790 2.28699940 2.66552921 8.48668059 10.09242959 NA 7.97910046 5.97630635 10.44939939 9.02982279 2.66552921 9.01220382 9.08920125 10.63794727 10.40491089 9.34821183 6.69978897 11.55285754 2.55003873 8.96508008 9.90465916 4.32263484 0.55001409 10.85762284 3.21300504 12.76040946 11.82442065 8.35739761 10.45392433 9.66725279 9.49255704 4.05254632 2.55003873 -0.03489914 7.73656970 8.69129826 9.30604277 10.02374826 6.74643908 7.33898947 7.97350853 10.03385836 5.67932527 9.95234405 -1.03504695 10.56173567 2.28699940 5.56499390 10.03102790 7.20934906 4.05254632 9.92942087 8.68275657 6.74643908 -1.03504695 14.01904831 1.28699940 10.34066251 NA 7.08402067 5.79797013 7.87197052 9.35309741 14.3174656 6.5119740 8.3638238 12.9981588 10.3345302 11.1739240 12.5674309 10.4654240 11.2118206 10.6542044 13.2909476 11.4576843 9.1487153 8.7497149 0.5500141 7.1148272 11.0482269 11.299912 6.706547 8.444860 8.754614 8.966488 9.806495 6.816829 7.804284 11.466917 7.919276 5.231866 4.665518 7.245387 11.285881 10.137507 8.969300 9.240040 11.448896 6.542509 9.650705 10.568706 11.470892 9.901718 10.428604 8.300470 1.286999 8.858609 8.333783 5.391345 11.227469 7.416291 10.751758 10.010840 6.448896 13.673248 10.052543 10.169651 12.676639 10.542981 9.282493 1.286999 TCGA-A2-A0T5 39 0 NA 531 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 5 2 2 4 2 1 1 4 3 4 NA NA 0 0 0 0 4 0 0 4 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 1 0 4 6 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 2.981381e-05 8.287795e-06 10.8617502 5.8210265 6.3328064 11.2320599 0.1298765 9.9166797 NA 9.2972836 11.7450353 11.1598428 9.5540318 7.7072942 8.1373601 9.8875333 7.4305997 9.6082981 9.7767242 9.2513991 6.9199419 -0.4550201 9.9930193 10.8713324 12.6565277 11.1204422 9.5470148 10.3856809 4.2728220 10.4555457 -0.4550201 3.8668289 7.3328055 13.5152336 12.9694630 7.9329204 13.2681373 12.5500889 9.2322787 7.6844541 5.2997905 7.0327433 8.2981199 9.5271836 9.3777929 12.5913449 4.0043306 9.9145002 13.8553737 4.7543584 9.6450396 10.7291585 6.8303048 5.8022915 NA 12.4415854 10.6616401 3.7148280 9.0226613 1.7148390 4.7148280 9.3401309 9.9084902 10.0312353 10.9603807 9.9112252 9.9237397 6.7248126 10.7919404 10.0801784 7.0287183 8.8452554 8.7916435 11.5068952 15.4912267 7.6142453 10.6326973 11.1986438 9.3522580 3.0684645 2.1298765 8.8521037 8.6984550 11.2781302 NA 5.8486830 7.8735776 9.5762597 10.9839547 12.4886082 4.1596130 4.9542940 10.3638845 12.2994774 1.5448810 13.2248778 6.4517930 7.1522331 13.0077886 13.5853639 12.7952754 7.1373601 10.3789790 11.1912367 10.6579940 11.1533888 4.2997868 8.7519172 12.3283105 11.9682816 -0.4550201 10.1819806 9.3825309 1.1298765 3.7547486 9.8908625 11.7791216 10.3678721 8.9930193 14.6625461 10.2880543 9.6709621 7.9436465 5.7928293 15.9588449 9.7975685 12.7030393 11.9034168 10.0782327 9.9595882 8.0684650 10.9947918 1.27340000 1.58380000 1.59730000 -0.00235530 -0.00235530 0.00221930 0.00652620 -0.01092700 -0.00429290 0.57156000 0.57156000 0.57156000 -0.00806000 -0.00170300 0.00000000 0.00000000 0.00000000 -0.00429290 -0.00429290 0.00249690 0.00427280 0.00069327 0.00097064 0.00097064 0.00097064 0.00277450 0.00277450 -0.00415460 -0.00055444 0.00127730 -0.00346270 0.00319100 -0.00235530 0.00221930 -0.01362800 -0.00352130 -0.00352130 -0.01092700 -0.00429290 -0.00832100 -0.00124730 -0.00124730 0.58148000 -0.00083160 -0.00083160 -0.00226280 0.00041593 0.00485790 0.00485790 0.00000000 0.00000000 -0.00429290 -0.00429290 -0.00429290 -0.00124750 0.00958830 0.00069327 -0.60931000 0.00097064 0.00097064 0.00624810 0.00277450 -0.00415460 -0.00055444 0.01056400 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 8.7676978 12.7360393 8.0645391 9.8134450 0.5734715 10.9667049 2.3522500 3.6741894 8.9068467 8.2914171 -0.4550201 8.0765965 2.4518046 10.3958712 9.2796127 1.1298765 6.3903925 9.1194965 9.9372203 10.5547316 9.3917018 6.6793295 11.2246030 3.4517914 9.9468491 9.9237397 9.7821130 NA 10.8509646 2.5449057 13.8069978 12.6541623 7.7047745 9.7549655 7.0043351 9.4910782 3.9711664 2.0043216 -1.4552179 8.2243833 8.6638441 10.0487287 9.9532326 3.2997868 7.8285472 7.1778979 10.5030932 7.3554744 9.6008633 0.5448810 10.3646830 3.6323613 4.7148280 10.1469569 6.9463800 2.8668289 8.8577860 7.6481907 5.6323671 1.1298765 14.8450231 -0.4550201 9.8707705 -0.4550201 8.3888241 5.9112242 7.7421194 8.7371956 13.750815 5.556129 8.911225 13.268137 10.393033 11.575915 12.591345 12.196515 9.610992 10.594411 13.232825 11.763012 8.698455 8.849825 3.499093 7.380954 11.267284 11.231841 6.778523 9.142024 9.271973 8.703513 10.644704 6.600185 7.816366 11.120442 7.248806 4.299787 8.900254 6.579756 12.957671 9.872456 9.603571 8.546311 11.253771 4.377790 10.031235 10.407928 11.040758 10.487051 10.956943 9.460782 -1.455218 8.858568 7.436687 5.036754 10.983955 7.380954 10.518213 10.363885 7.650811 15.121742 10.200881 10.453671 13.241219 11.086000 9.584507 -1.455218 TCGA-A2-A0T6 50 0 NA 575 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 72.63.0 8 2 2 3 3 2 3 3 2 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.308346e-06 5.284165e-07 10.8360446 9.2991803 5.8664976 11.7008296 0.2740529 10.6202775 0.2740529 10.4218817 12.1934628 7.7778668 9.8622869 7.9796733 9.0537600 9.6060774 6.3347363 8.8005402 10.1597371 9.8353287 8.1210983 4.1069345 10.5559708 10.0926229 11.5711003 11.2231379 9.5219682 10.5939951 6.5028588 10.7786090 -0.7259471 5.6663589 9.8131995 11.9230724 12.8452755 8.6370806 13.5771793 13.5796751 10.0554005 7.2018191 4.4439646 6.7618810 8.7738866 9.5124456 8.4046115 12.8377137 -1.7259471 10.8300678 13.7024337 4.8887530 9.4897619 10.7216406 9.3327091 8.1824336 -1.7259471 13.6159515 10.5022491 3.8590054 8.3825652 -0.7259471 5.1929043 10.2216777 10.1699946 9.9196993 11.7912180 8.9951399 9.6961055 2.5219804 12.0278843 10.6152816 6.8286290 8.2253255 NA 9.5801025 14.9381408 7.6950744 11.8865638 11.6429564 8.1148188 3.3615017 2.6663476 9.1794277 9.5703834 11.3505224 -0.1409846 6.3129592 6.8887506 10.3187764 11.4776946 6.7698960 7.5124458 5.5594429 10.8566532 11.8193673 -0.1409846 13.6514208 5.7897397 7.2852681 12.3277121 13.8070663 13.0085916 7.9640387 9.9822625 11.4123126 10.9530436 11.3573539 5.5869238 7.9429256 12.2020964 12.1586883 0.8590154 10.4228351 9.1604995 -0.1409846 3.7364209 9.7931855 10.5712436 10.2648539 9.0463555 14.6232874 10.3009100 10.1265703 8.1824336 4.8739559 13.8466522 8.7024009 13.3513989 13.6205545 10.2383817 9.5903223 8.9015747 10.5161341 -0.00235530 0.53696000 0.53925000 0.00000000 0.00000000 0.00374650 0.22191000 0.00013863 -0.56724000 0.22237000 0.22237000 0.22237000 0.00027728 0.00650530 -0.03749000 -0.03749000 -0.03749000 -0.01216200 -0.01216200 -0.00360110 -0.00287000 0.00388540 0.02188400 0.02188400 0.02188400 0.46084000 0.46084000 0.51054000 -0.00249380 -0.00235530 -0.00235530 -0.00069303 0.00000000 0.00374650 -0.00110870 0.22191000 0.22191000 0.00013863 -0.56724000 0.00513590 -0.00027724 -0.00110870 0.22237000 -0.00147970 -0.00147970 0.00221930 -0.01865500 0.00650530 0.01670500 -0.03749000 -0.03749000 -0.01216200 -0.01216200 -0.01216200 -0.00211550 -0.00287000 0.00388540 -0.56414000 0.02188400 0.02188400 0.00232880 0.46084000 0.49905000 -0.00249380 -0.00027724 -0.56664000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 10.0083269 13.8966360 10.7182792 10.3333853 4.7334737 10.3320325 3.9464689 0.2740529 8.3588490 8.9900027 -1.7259471 8.8362928 4.8286316 9.9653481 9.6982070 4.5959690 10.3952505 9.3279666 12.1104857 10.1745303 9.3042664 8.2003366 11.1291039 4.2740380 8.9169949 9.6961055 3.9178995 NA 10.5495833 3.2282338 12.6190994 11.9493363 8.6049575 10.1861816 8.5501654 9.5577080 4.5219678 1.0814078 0.5959810 7.8552416 9.1108802 8.9169949 9.9644753 5.4834934 7.9341974 5.8362827 10.2128852 6.5172143 9.4483422 NA 11.0523233 4.8739559 4.5028588 9.5606389 5.8045647 5.7252531 9.7221571 9.3232086 7.2224076 NA 13.7141313 0.8590154 10.0011103 NA 8.8228627 5.2740417 7.8813710 8.8324616 12.020881 4.700307 8.216555 13.577179 10.301256 10.553071 12.837714 11.191786 9.299872 11.349687 13.737374 11.129104 9.570383 9.716984 NA 7.251320 11.465408 11.3921707 7.4514601 8.8034712 9.2950207 7.6337901 10.6796875 8.0846123 6.9142859 11.2231379 6.7658940 3.7976045 5.8286290 5.8611812 13.6693406 10.8972364 7.9848474 8.2810681 12.3796219 7.3102147 9.9196993 10.2644994 11.2514996 10.0822005 10.8059096 9.3753599 0.2740529 9.5354657 9.0112460 7.1320215 11.4776946 8.6469057 10.2183611 10.8566532 7.7169840 14.0144013 9.7951503 10.5013558 13.2524831 11.0922235 9.7472392 2.7334628 TCGA-A2-A0T7 51 0 NA 631 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 2 2 1 1 3 2 2 3 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 11.3697878 7.4032549 6.5483488 10.7053522 1.0158543 10.7590047 0.5304703 10.3868521 11.7182735 12.0903772 10.2158762 7.5616454 8.3908929 9.9878074 5.7934616 9.1025584 10.2221701 9.6827115 7.5259107 2.7934590 9.7986176 10.6096446 14.2311914 10.3180027 9.0873156 10.8056199 4.9898565 10.8209063 NA 4.9898565 8.2879833 12.8656494 12.3379425 7.8433093 12.8468778 13.7793918 10.7219793 5.8738353 3.7003509 7.2084987 8.7408544 11.0122260 8.8387656 12.7256142 2.9089474 10.6181546 13.2235214 7.8914933 9.3141713 11.8578669 7.0972421 7.2718934 0.2085173 14.4585326 11.4084775 2.9089474 8.9406660 1.2085173 3.9089378 10.5128498 11.0983826 9.7816723 11.3518817 9.4682418 10.0065652 2.1153995 11.2320796 10.1089879 5.3377824 7.9193049 2.4564382 8.5975919 15.2328915 9.0935847 11.3108023 11.5434700 8.0318655 2.9633816 3.9633816 8.8369441 9.2866492 12.0775139 -1.7913579 5.1033172 7.5748206 10.4267589 11.3450090 7.0880822 6.0602485 7.2197261 10.5137052 11.7919339 4.0664767 13.7094026 6.0664789 7.5394155 12.3911256 14.5028859 12.7243830 8.4469034 9.8698312 10.9943596 10.5375015 11.1950516 5.1742826 8.4776251 11.9629685 10.4682417 0.2085173 10.5780958 10.1048309 1.2085173 3.0931038 9.7736005 11.0140408 10.1462401 9.5082789 15.1384619 10.2339841 10.8910542 7.7878144 3.7934590 14.1765802 7.8667102 13.3762694 12.7931674 10.0884646 9.7068491 8.6420838 10.9967131 0.1091600 0.6752400 0.4117300 0.2258700 0.1994900 -0.1622200 0.6334700 0.1363800 -0.3828300 -0.3751900 -0.3751900 1.9980000 0.1334200 0.1169700 0.1325300 0.1325300 -0.2567600 -0.3511400 0.4486200 0.1762800 -0.0638810 -0.3431200 0.3529400 0.1811600 0.2314300 -0.2827900 -0.2827900 -0.2827900 0.4812500 -0.3113500 0.1178000 -0.0529450 0.2258700 -0.1619600 -0.1622200 0.2089600 0.2089600 0.1363800 -0.3828300 -0.3828300 0.0900930 -0.3819400 -0.3751900 -0.2047000 -0.0445950 -0.0445950 0.0773830 0.1169700 0.1457300 0.1325300 -0.2750100 -0.3656400 0.4486200 0.5828100 0.1762800 -0.0638810 -0.3435800 -0.3234100 -0.2029000 0.1811600 -0.2044300 -0.2827900 -0.2827900 0.2166300 -0.0088976 -0.2520500 0.117 0.117 0.133 -0.124 -0.351 0.097 -0.384 0.000 -0.344 -0.062 -0.323 -0.062 0.141 -0.198 -0.198 -0.283 -0.283 0.109 1.092 0.188 0.188 0.000 -0.277 0.000 0.000 0.203 0.203 -0.162 -0.162 0.612 0.237 -0.383 -0.383 0.000 0.000 0.432 1.954 0.000 0.000 0.000 0.117 0.117 0.133 -0.124 -0.351 0.097 -0.384 0.000 -0.344 -0.062 -0.323 -0.062 0.141 -0.198 -0.198 -0.283 -0.283 0.109 1.092 0.188 0.188 0.000 -0.277 0.000 0.000 0.203 0.203 -0.162 -0.162 0.612 0.237 -0.383 -0.383 0.000 0.000 0.432 1.954 0.000 0.000 0.000 9.0703609 14.4028129 7.3480500 10.5273236 3.1091265 11.5961119 0.7934381 1.7934798 8.7428012 9.3784234 0.2085173 10.2659216 3.5660479 10.3173495 9.3416407 3.2529000 8.2906474 10.0815580 9.7505630 9.4799615 9.1611888 7.2474177 11.0388156 2.3784284 9.6013526 10.0065652 4.1626934 NA 11.0730716 4.4752860 12.1127567 12.1534850 7.9158579 9.7549107 8.4973645 8.8195232 5.8232093 2.2084860 -1.7913579 9.5360512 7.8949990 9.3821757 10.1052092 5.2084978 9.4855882 7.8809236 10.0366349 6.8084108 9.9550128 1.9089282 12.1281067 3.4564251 4.0664767 8.8747758 6.1944535 3.4939035 9.9342908 7.9227438 5.4939003 1.3784006 13.6419209 -0.2065619 10.3690002 NA 7.3038958 6.4752843 8.1407132 8.5759132 12.276108 5.306532 7.986575 12.846878 10.157596 10.584081 12.725614 11.259027 8.668954 10.686257 13.528735 10.792286 9.286649 8.278620 2.667938 7.451673 12.879265 11.451524 7.130339 9.436716 10.377797 8.814904 11.060101 7.019070 8.813052 10.318003 6.908938 4.475286 6.789699 8.072189 11.858877 10.472941 9.023882 9.216927 11.219726 4.976684 9.781672 10.406636 11.232772 11.437317 10.943843 8.767876 5.548347 9.055031 8.129477 5.684232 11.345009 7.931306 10.505701 10.513705 8.092669 13.795426 9.683725 9.902421 12.821137 10.533242 9.730590 1.793480 TCGA-A2-A0YC 59 0 NA 990 breast stage iib t2 n1mi m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 74.60.0 5 5 2 2 3 2 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 3.615481e-07 5.562279e-08 10.6915329 6.3374542 7.3399916 11.2178570 -0.2273542 11.1125197 NA 9.8989440 12.1839158 9.5583945 10.0026901 8.1020922 9.2079926 9.0787312 6.9257989 9.8088432 10.5735696 9.4644132 6.9224167 4.6634414 10.6360816 10.0840395 12.9579581 11.3315686 9.0603820 10.6176369 5.0331983 10.5053883 -1.8124856 -0.2273542 8.6430343 12.2752529 12.9869888 7.3246981 13.8308305 13.4658299 9.2142307 7.4284984 4.6634414 5.7499499 8.3053504 9.1469846 6.9982790 13.4455001 4.6139736 10.1353441 13.6360171 4.3169929 9.0194737 11.2302216 7.3971603 8.5960369 -1.8124856 14.1952104 9.4643667 1.5096452 7.1331515 NA 4.9821220 9.9946595 10.5556679 10.1114061 10.8012664 10.2107684 9.8689455 1.1877044 12.0132623 10.0066886 7.7014347 8.8315635 -0.8122323 11.3245381 14.4098417 8.4721843 9.8618994 12.1171505 8.0870639 1.5096452 4.8601335 8.2470517 9.2279968 11.2500906 -0.8122323 6.0764501 7.2778193 10.2194084 12.2312472 7.2537964 6.3676157 5.2429911 10.5391986 11.9467631 1.3576083 13.6446711 6.7801644 7.6223352 12.1315040 12.7187840 13.0302539 7.6368559 10.4071782 10.9200866 10.6632354 11.6063504 5.4261104 8.4008116 13.2503015 6.5928487 NA 10.6458574 8.8387589 1.5096452 3.2781335 10.4011152 10.0094811 10.2128468 8.9982787 15.1790297 10.3620087 9.6290952 9.1968359 4.5275583 16.6512635 9.0316282 12.2431591 10.7122488 10.5278354 9.4171268 8.0394559 10.6657588 0.00416320 0.64359000 0.64359000 0.00513590 0.00513590 0.00569190 0.01590400 -0.01563400 -0.00055444 0.02539000 0.02539000 0.02539000 -0.01464100 -0.00110870 -0.07267500 0.50290000 -0.75011000 0.00000000 0.00000000 -0.07254100 0.00083195 -0.00443120 0.61462000 0.61462000 0.61462000 -0.04319500 -0.04319500 -0.04319500 -0.00705320 -0.02382800 0.00416320 -0.00013862 0.00513590 0.01195800 0.00569190 0.01349200 0.01237600 -0.01563400 -0.00055444 -0.00055444 0.00332990 0.00332990 0.02539000 -0.00083160 -0.00083160 -0.00083160 -0.00083160 -0.00110870 -0.00110870 -0.07267500 -0.74664000 0.00000000 0.00000000 -0.00899060 -0.07254100 0.00083195 -0.00443120 -0.74133000 -0.74133000 0.61462000 0.01754400 -0.04319500 -0.04319500 0.00402430 -0.00443120 -0.02027500 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3182775 12.8465880 6.1820606 9.9002342 3.7422973 10.7566133 2.1877044 NA 8.1635551 7.4427354 NA 7.3719378 3.3576365 10.2324428 9.1184446 1.6471303 8.1360745 8.8539311 10.6233774 10.6491866 9.9271966 7.8548185 11.3102116 2.8315733 7.9308585 9.8689455 2.7112746 NA 10.6435481 1.1877044 11.9901225 11.8766131 8.2279971 10.3971606 10.0592274 9.1147444 3.9425990 2.3576365 0.5096452 4.8601335 8.8477032 9.6558221 9.5225392 4.6634414 9.3314092 6.5496507 9.7321886 7.3246981 10.0343728 -1.8124856 11.6532736 3.1877044 8.5896534 9.5465231 6.7886231 4.1184428 9.1599689 8.4914880 6.8097591 -0.8122323 13.4586594 -0.2273542 9.9926448 -0.8122323 8.3676161 5.5970991 7.5430581 7.4615024 13.8156459 4.3374542 8.7394154 13.8308305 10.3507278 10.5501989 13.4455001 13.1000820 8.3812323 11.1132616 12.9538219 9.9723420 9.2279968 8.9926450 0.7726458 7.4213268 11.4995973 11.1391740 7.0945982 9.0611514 9.2169944 9.2817849 10.3373717 6.8060933 7.5670853 11.3315686 6.6181594 NA 4.5452580 6.5274238 10.5856491 10.1516870 9.1206601 8.4320708 12.6772416 5.3775333 10.1114061 10.9373671 11.5001647 9.6491866 10.7331543 8.9088063 -0.8122323 8.6336840 8.6652833 4.6306501 12.2312472 8.2870548 10.7166496 10.5391986 7.5276459 13.3502558 10.2972114 9.6624272 13.5349825 10.1978855 9.9122210 0.7726458 TCGA-A2-A0YD 63 0 NA 769 breast stage iib t3 n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 74.60.0 5 2 2 4 2 1 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 5.006051e-07 10.75784033 8.67386202 7.07632927 11.01050573 0.95046841 10.58680789 1.68746387 10.12541102 12.00870267 8.40032188 9.93537856 7.98574291 9.54231939 9.62937884 6.77491354 9.52286985 10.23241541 10.11287668 7.76853503 3.22349978 10.35952271 10.20865881 9.08918377 11.28977869 9.70314483 10.62908554 6.37675053 10.47893946 -0.63441943 -0.04945693 9.55349356 12.88865599 12.30739582 8.41128260 12.61100132 12.98499781 10.15790647 7.05552106 4.99487837 6.82085036 8.45563546 9.97516342 8.55904817 12.70342350 3.06596860 11.15077099 13.58469142 5.94295077 9.69588527 9.90128431 8.52539435 6.65092536 NA 14.09447731 12.25476920 2.27241144 7.65092536 NA 5.99488063 9.93774942 10.39929000 10.33382968 12.14544740 9.83719806 9.91915219 6.13370736 11.44250544 10.23318776 7.29626008 9.57192686 -0.63441943 11.03551518 15.06413262 8.73766953 11.64701831 10.44966691 8.67727109 2.17287150 3.72307795 9.25121917 9.55039819 12.16044638 NA 6.31971908 7.62996563 9.68632351 11.15097536 6.66473028 6.71866986 5.43161293 10.75757194 11.67868939 1.82497147 13.69643977 5.74922585 7.51272782 12.92053136 12.76999925 13.04351775 9.15587140 10.33490945 11.18530282 10.52795831 11.41605182 5.13370736 8.33274910 11.69853843 9.88072990 NA 10.60631424 9.01477901 1.17287150 3.37451093 9.36552283 10.99487950 10.55503866 9.39825737 15.28341939 10.09216686 9.79440644 8.61107572 3.17287150 14.97293991 10.15749966 14.18440785 12.26336836 9.99396838 9.70704174 8.47012155 11.21014433 0.93223000 1.55240000 0.86592000 0.00138680 0.00138680 0.00166420 0.00694350 -0.01254000 -0.00609040 -0.00180140 -0.00180140 -0.00180140 0.00180300 0.00180300 0.01740400 0.01740400 0.01740400 -0.00526100 -0.00526100 0.00305220 -0.00691950 0.00041593 0.00694350 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.45139000 0.00291330 -0.00290910 -0.00159390 0.00138680 0.00166420 0.00972760 -0.00340870 -0.00340870 -0.01009400 -0.00609040 -0.00609040 -0.00318590 -0.00318590 -0.00180140 -0.00297520 -0.00297520 -0.00297520 -0.00249380 0.00180300 0.00180300 0.00652620 0.01740400 -0.00526100 -0.00526100 -0.00526100 0.00000000 -0.00691950 0.00041593 -0.47279000 0.00694350 -0.00027724 0.00610900 0.00249690 0.00249690 0.45139000 0.00597000 -0.46621000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6964397 13.9646221 7.4922273 10.8399893 4.2235075 10.4970583 2.4529907 0.3654686 8.1534254 8.2992135 -0.6344194 8.7895633 4.5152709 10.0201589 9.5931388 1.9504684 10.0206064 9.8777696 11.3865028 9.3146199 9.6498728 7.7296574 11.8868780 4.7578393 8.1468828 9.9191522 5.3989454 NA 10.6610049 2.4529907 12.5627396 11.9241827 8.5304297 10.0511478 9.9907751 8.9967000 4.2481629 1.8249715 0.3654686 3.3655246 8.5366999 9.1145542 9.6323095 5.6784072 8.5442002 6.5991422 10.2697811 7.0968416 9.5559649 NA 10.8631252 4.2235075 4.5749734 9.3556482 5.2918798 4.0379444 9.4747007 8.7263701 5.9654357 NA 13.4241911 1.9504684 9.9880323 NA 8.7075976 5.2235036 7.6986783 8.3327491 13.594041 4.594340 8.096842 12.611001 10.484140 10.753540 12.703424 11.894343 9.291077 10.971697 14.116910 10.641647 9.550398 9.015677 NA 7.016574 11.967294 11.432789 6.889085 9.209444 8.863375 7.918192 10.221174 7.547917 8.138662 11.289779 6.998518 5.009379 8.427569 6.498409 11.734439 10.075468 8.431383 8.540449 12.473230 6.308037 10.333830 10.282895 11.160345 10.945310 10.727467 9.744901 NA 9.686182 8.028227 5.494806 11.150975 8.547917 10.859878 10.757572 7.639318 13.400923 9.861378 10.496737 13.231304 10.667305 9.432957 2.365525 TCGA-A2-A0YE 48 0 NA 554 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 74.60.0 4 4 4 1 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 8.065304e-07 2.503025e-07 11.32382681 3.73422187 7.73636540 11.14017204 -0.65812808 8.90890806 NA 9.89457194 12.32996610 10.84075196 9.35522554 6.88879682 9.71150007 9.37325930 7.77653107 10.07322189 9.60341011 10.48624234 8.74597980 4.81763861 9.74118078 9.59693142 12.44363232 10.00768285 9.63076893 10.34928057 4.55135605 10.94923310 3.29610495 -0.07308969 6.93061790 11.11339226 12.63659533 8.89553196 12.47488441 11.40496074 13.79954017 5.62730625 0.34187192 8.41336517 8.57911263 8.69725395 8.95384985 4.95661429 NA 9.38766238 7.99295476 7.75341400 9.86593026 10.83200158 9.29100005 5.08337082 2.04232915 15.07897132 7.28734670 -1.65790044 9.21841963 3.42936155 4.60869098 9.56650752 10.44223659 9.99832767 9.02226238 10.11215368 10.35522543 0.66384555 11.21380802 10.13509963 4.40799169 8.24427772 0.92683442 5.97125844 15.16915865 7.51362970 11.28990494 11.69504964 10.28405068 1.66384555 NA 7.95661255 9.21303810 12.02138291 NA 2.58983538 7.66383061 9.73797231 7.83775785 4.78484420 5.11008757 6.90032343 7.98936100 12.15918627 1.80132424 13.97325040 4.01432851 4.64568437 12.47118581 13.45030474 13.92897707 8.64682436 12.01355441 10.67309968 10.09676522 10.53327054 5.37532447 8.38902682 11.83450712 6.43465992 1.14925937 10.34331099 9.26225555 0.66384555 3.04400935 9.80644861 7.63652385 9.39379135 10.06684291 14.56511264 10.27596221 9.18739290 6.48145395 2.14925937 11.91140244 7.66383061 12.87340610 12.72067179 11.23349667 11.18051583 8.34892994 10.10298022 -0.306390 0.365920 0.333680 -0.329940 0.578440 -0.335830 3.245600 0.154420 0.612990 0.106010 0.570060 0.088692 0.170310 -0.576430 0.343740 0.441050 1.365500 1.239600 -0.335370 -0.340440 -0.537030 0.974200 -0.129400 0.740050 -0.108540 0.052383 0.089272 0.089272 0.583630 -0.323330 -0.316810 0.468780 0.566320 -0.149010 -0.335830 -0.344230 -0.344230 0.154420 0.612990 0.544730 3.319200 0.110080 0.110850 -0.550460 -0.550460 -0.550460 -0.550460 -1.061300 -0.589020 0.371660 -0.346560 0.431080 -0.335370 -0.335370 -0.340440 -0.537030 -0.368500 0.596740 -0.129400 -0.144380 -0.386800 -0.894190 0.089272 -0.335030 0.562680 -0.353270 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.610 0.610 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.610 0.610 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 7.21534661 12.99239363 4.80133458 9.50932095 1.66384555 13.21544303 -0.07308969 3.04234666 8.27854052 8.13143669 8.98846145 8.22578344 4.66382847 10.90676676 9.21149655 4.36427126 6.04234229 9.71476788 7.70822518 10.03800097 8.90753816 7.75341400 12.32987733 -0.37706965 8.12326268 10.35522543 2.14925937 NA 10.46343630 6.11668913 12.17142734 12.89918698 8.53296210 10.74011205 10.42870248 9.64397052 1.66384555 0.34187192 -1.65790044 -0.65812808 8.48401000 9.78588235 8.07999510 3.55135605 9.77909832 6.51182854 10.25740871 6.98936157 10.78484633 3.86546357 13.44830216 3.51182222 3.09678472 9.45236007 8.38491625 6.06982244 8.37944985 6.09009548 7.48656073 2.42937494 13.00662784 -1.65790044 10.52460753 -1.65790044 8.94552928 4.58982939 8.75447267 8.18425302 12.92541460 9.17953071 8.52801684 12.47488441 9.49164990 9.98305145 4.95661429 10.32097064 10.38616374 12.03091797 12.95787721 9.20763618 9.21303810 8.22301654 -0.07308969 7.82773203 10.83024510 10.930149 5.341904 7.921219 9.212268 9.101791 9.874488 4.817639 8.489108 10.007683 8.941816 6.035391 8.552574 9.529453 12.654644 8.835758 7.426711 8.816623 9.484648 6.049263 9.998328 9.348930 12.167060 10.743582 10.070249 8.973989 NA 9.016722 7.378076 6.641111 7.837758 8.478894 9.955328 7.989361 7.881061 13.188275 9.378076 10.032337 13.365397 11.014328 8.379450 2.429375 TCGA-A2-A0YF 67 0 NA 469 breast stage ia t1b n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 74.60.0 5 5 2 2 3 2 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.503025e-07 10.48005079 7.07925543 7.86252020 11.03317719 1.08773438 11.19968406 1.08773438 10.43922480 11.42911320 7.55737486 10.14775378 7.47143786 8.31173515 9.47897706 8.45623982 9.82074875 9.48005079 9.70841143 6.57557404 2.33565475 8.96425046 8.83340784 14.43887967 11.19609448 8.70978517 10.78990609 4.88214903 10.55022540 0.40968963 4.11010428 8.63559189 12.36676351 12.83419520 6.49287544 12.71115766 13.77822249 8.03756013 7.13212747 3.57959049 4.44528308 8.48967940 10.40118331 5.50558610 13.56700840 1.89506991 10.85695139 13.67761855 5.08773438 9.79968847 11.02676154 8.38694154 6.83927687 -1.91212987 13.62903815 7.76545319 NA 7.22215925 NA 5.45405413 10.51058656 9.97837770 11.57217866 10.27322832 10.20082432 9.09896058 -0.91240138 11.57758135 9.53584962 3.78817410 8.69968037 NA 12.12725222 13.23239162 8.28450766 12.25577865 11.43549312 8.36152888 -0.32734837 4.70244146 6.20147508 9.32434551 12.39976543 1.08773438 5.98860062 7.22984072 10.32673518 11.23430204 3.94571070 6.17519523 4.37313312 10.96578428 11.66090714 3.17518924 14.03851707 5.23747959 7.95963861 12.10567268 12.31737838 13.06380518 7.54921248 9.20732309 11.33803180 10.94016925 10.56296016 3.37313312 8.47467371 11.76214635 8.36734398 0.08773438 9.89307426 9.14437120 NA 2.61254123 9.06858698 10.97304840 10.60367956 8.56549170 15.06723672 9.90631551 10.13792216 7.91904088 1.67269688 15.98352755 11.08544212 11.94045793 11.47022229 9.61667583 9.43313869 8.64997573 10.09806920 0.00124810 0.61498000 -0.65687000 -0.00027724 -0.00027724 -0.01784600 0.00000000 -0.00366030 -0.00366030 0.01517100 0.01517100 0.00652620 0.01852300 0.02398700 0.00791750 2.89630000 -0.00719580 -0.70442000 0.01140000 -0.01133500 0.00638710 0.03580600 0.04471500 0.04471500 0.04471500 0.04443200 0.04443200 0.04443200 0.05409100 -0.60052000 0.00124810 -0.00622860 -0.00027724 0.05508800 -0.01784600 0.00000000 0.00000000 -0.00366030 -0.00366030 -0.00332430 0.00777830 0.00777830 0.03933700 0.01028500 -0.32774000 0.02216400 0.02216400 0.02398700 0.02398700 0.03467700 -0.74054000 -0.73343000 0.01140000 0.01140000 -0.01133500 0.00638710 0.03580600 -0.71167000 0.04471500 0.04471500 -0.00589940 0.04443200 0.04443200 0.05409100 -0.01312700 -0.68497000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.016 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.016 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5348164 11.7216368 2.9457201 9.0842067 3.8383367 10.9130897 -1.9121299 -1.9121299 7.7724822 6.8723683 NA 7.2014751 1.6726969 10.5848367 9.2349383 NA 7.9047171 10.1045416 11.1239070 9.5538097 9.1802660 8.3949342 11.0249233 2.9457201 8.5624535 9.0989606 3.3731331 1.4096353 10.0520743 2.4800583 11.8323570 11.7191378 8.0065965 11.3026595 7.8071224 9.1059336 2.8950893 4.1962608 -0.9124014 7.9779977 7.8139517 7.3661832 11.0073416 3.3356548 6.9782105 6.6346281 10.7851354 5.4800518 9.7799130 -0.9124014 11.2807966 2.6112904 7.3237474 10.0055046 5.4710931 3.8950893 9.6853203 8.0607132 4.9332233 NA 13.5586146 0.8950699 9.4253552 NA 7.8190525 6.4971237 8.2849499 7.8224427 15.877721 4.657589 8.878896 12.711158 10.669875 9.949596 13.567008 12.701753 9.370243 10.220233 12.862932 10.754623 9.324346 8.110101 2.087734 7.736990 11.852916 10.383789 7.036101 9.613254 8.929298 9.457876 10.390983 5.958098 9.515570 11.196094 6.829200 2.611290 6.252641 7.064154 10.009574 10.878896 8.797679 7.067873 12.151381 5.098963 11.572179 11.177680 12.012268 9.349241 10.921414 8.885395 NA 8.522518 7.884600 4.920622 11.234302 9.239384 10.461305 10.965784 7.082087 13.422002 9.944159 9.867863 12.820537 9.449129 9.423124 1.895070 TCGA-A2-A0YG 63 0 NA 666 breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 14 white not hispanic or latino 74.60.0 6 3 1 3 1 5 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.14478e-06 3.469029e-07 12.96714468 4.47983846 7.45306975 10.80653045 -1.60779250 9.79165163 0.97731656 10.68842963 12.08944995 12.00489677 10.19811767 8.41335375 6.98483084 9.42992075 7.49040567 9.86709368 10.42407494 11.12326843 6.62599370 0.71431147 10.21613907 9.89818537 15.31122537 10.27501683 9.81075349 11.47917346 4.86810890 10.96436340 -1.60779250 -1.60779250 7.61878632 12.11912412 12.32514217 8.03442538 16.92917875 13.37407484 8.27195691 7.87013227 5.29926298 4.22526722 8.52036803 8.31718647 6.37536791 12.95640415 NA 10.34001074 12.86207917 1.85179900 8.61882192 11.69629721 7.60426188 8.44358262 0.97731656 14.25051460 10.73444849 0.71431147 9.00708363 0.39242734 4.29926664 9.81233392 10.61244972 9.35960001 11.56386335 10.08934136 9.78469128 0.97731656 12.27864192 10.10747773 4.96222973 8.96222944 -0.02268344 10.28643359 14.97818723 8.46339358 11.53687269 12.15942020 7.75431766 -0.02268344 4.99228806 7.91789476 9.60182723 11.68383231 NA 4.36965492 6.67777601 9.34074095 10.55947824 3.78469242 5.49040647 4.78469242 10.91446481 11.90708783 4.06479665 13.67444865 5.16055721 6.61637534 11.84061917 13.44706288 12.85634508 8.39237367 10.78066016 10.82125731 10.05770965 10.93757958 5.18678973 8.14056651 12.47875883 10.27463475 -1.60779250 9.30451469 9.06921236 1.39237238 3.29203076 9.90610141 8.77607799 10.24568330 9.79591838 14.93330397 11.04095604 10.13678725 8.70071297 5.36965492 14.70628423 10.37928240 12.90338514 10.71852234 10.31644401 8.91200998 8.12538919 11.79098388 -0.41684000 2.66570000 -0.04386700 -0.01779700 1.16850000 -0.03176200 1.38090000 0.35056000 0.06380200 -0.00179530 -0.00179530 0.64580000 0.57684000 -0.54189000 -0.43222000 -0.02095500 -0.02095500 -0.00040981 0.36691000 0.00000000 -0.02164100 -0.00815640 1.12190000 3.65690000 3.65690000 -0.03285400 -0.10249000 0.20795000 0.82197000 -0.39974000 -0.41684000 0.38767000 -0.02520300 -0.02465500 -0.03408000 0.35758000 0.35758000 0.34991000 -0.01862200 0.02048900 0.63628000 0.63628000 -0.02807500 -0.41058000 -0.42155000 0.35725000 0.35725000 -0.54189000 -0.13690000 -0.42276000 -0.02095500 -0.00040981 0.35758000 0.35758000 0.01880900 -0.02026900 -0.00815640 -0.00040981 -0.41618000 -0.40561000 -0.26648000 -0.38391000 -0.13535000 0.82197000 0.56046000 -0.41794000 0.427 -0.137 -0.399 0.000 0.000 0.000 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.297 0.427 -0.137 -0.399 0.000 0.000 0.000 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.297 7.99228636 12.20835740 6.70978689 8.90708775 2.78469242 12.01442560 0.39242734 NA 8.93733821 6.77607766 NA 6.90621959 0.97731656 10.74331299 9.06568297 3.67777883 7.49040567 10.19489016 10.01030039 10.08498931 10.06765606 8.04521852 10.28529598 2.29927397 8.77499785 9.78469128 1.71431147 3.52165383 9.49106381 0.97731656 11.80361994 12.42183357 7.28415782 10.13215434 8.35815799 9.32532659 5.84358444 1.56227906 -0.60757266 4.25035527 8.80494348 8.17373359 11.59587471 2.64029700 9.56595107 6.31718647 9.91446481 6.39237410 9.56292487 NA 11.81351816 1.71431147 4.39237238 9.84344578 5.90854634 4.47983846 7.98483084 7.46115199 5.85180650 -0.02268344 13.15719355 -1.60779250 10.77148138 NA 7.88622943 3.85180900 8.62719132 7.53448109 12.475905 7.417513 8.450365 16.929179 9.773917 10.287192 12.956404 12.611542 9.515202 10.906841 13.944533 9.287949 9.601827 7.334888 2.977335 9.924730 12.329564 11.7073818 8.8558982 8.4354011 9.2849166 9.5152017 11.4132982 5.4798352 8.7846911 10.2750168 5.7052564 -1.6077925 8.0487985 8.8430593 9.8415224 9.7216095 7.6091196 7.8186384 10.7785057 5.4798352 9.3596000 9.4264849 11.3869040 9.8862293 11.2215019 9.8852284 10.6172798 9.7784519 6.9546163 5.3696549 10.5594782 6.7499257 11.4138744 10.9144648 7.4718589 12.6118343 10.1655130 10.4530698 12.1421385 10.3011417 9.8353173 0.9773166 TCGA-A2-A0YH 53 0 NA 659 breast stage iiia t2 n2a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 74.60.0 3 1 5 5 1 4 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.491682e-06 3.469029e-07 11.16494035 4.79034459 6.24641189 11.67799692 1.08990487 10.22775202 NA 9.65023986 11.61917482 9.03046520 9.74095858 7.85809106 9.47289124 9.80415248 7.47361160 9.04021985 10.01768492 9.26483266 7.21230377 4.20538469 9.16315603 9.96540033 12.65023981 10.46458424 8.98876023 10.10857085 6.97662025 10.60757638 NA -0.49512541 8.79956528 10.63197150 12.10311330 7.83586156 12.78528027 12.29692128 9.11596933 2.82686368 -1.49492209 7.45331179 8.76351050 9.14880068 7.46784027 12.49566893 0.82684335 10.06432161 13.32905795 6.49362972 9.44414897 11.27643397 7.75524279 7.35669317 2.41183296 15.18053067 12.33085328 1.96436166 9.15420066 NA 5.91433490 9.97051088 10.33308098 9.61477517 10.84535095 9.85090410 9.80529697 4.36292570 11.10625101 10.26774178 5.79034719 7.93957275 5.25983364 10.44268613 14.22540251 7.38935944 11.32492393 11.88472894 9.96846880 0.08990487 2.82686368 8.30098396 9.19232019 11.48186652 -0.49512541 2.89725979 7.91857228 10.53354125 11.24451416 5.54933957 7.25313742 6.08237262 10.93304292 11.66623386 4.33783238 13.36180765 5.54933957 7.58176022 11.26275113 12.39368771 12.40957908 8.80644071 10.59406385 10.50494449 10.02786426 10.89107638 5.14879991 9.19056943 11.62647797 10.07194979 0.82684335 10.39748725 10.62128844 0.08990487 1.67486737 9.43863510 10.93644206 10.09131518 9.45768580 15.37222321 10.25397580 11.46476535 7.64960253 4.96437553 15.45881125 8.66607626 12.41098948 11.31028530 10.55513321 9.17028037 8.02458065 10.37245493 -0.3227300 0.5786200 0.5786200 0.0448570 0.0342600 0.0225850 -0.1433500 0.0013868 0.0013868 3.6569000 3.6569000 2.1800000 -0.0085706 0.0000000 -0.0029091 -0.0029091 -0.0029091 0.1171200 0.1171200 -0.0212350 0.3004200 0.0133530 -0.2815600 0.0931850 0.0931850 0.3044100 0.3265600 0.3265600 0.3068100 -0.2864400 -0.3227300 -0.2675700 0.0448570 -0.2415600 -0.0066432 -0.1433500 -0.1433500 0.0013868 0.0013868 0.0013868 0.2577700 0.0059700 -0.6464000 0.2879100 0.2879100 -0.3207700 -0.2969100 0.0000000 0.0000000 -0.0029091 -0.0029091 0.1171200 0.1171200 0.1171200 -0.0212350 0.3004200 0.0133530 -0.6213100 -0.2815600 0.0931850 -0.3007200 -0.2682900 0.3265600 -0.3284300 -0.0977590 -0.2256400 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.643 0.628 -0.009 -0.297 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.643 0.628 -0.009 -0.297 0.000 8.9185723 12.6501602 7.6186865 9.2166115 NA 10.8324971 1.3123167 NA 8.5588703 8.7961152 NA 8.1738115 3.0899049 10.2226209 9.2830217 2.5049508 7.9312091 9.2731289 8.1067152 10.1311098 8.9011638 7.5844289 10.0017983 3.9967955 8.2123038 9.8052970 2.0899049 -0.4951254 10.3613700 1.6748674 12.6462534 11.9821968 7.7457355 10.4996515 10.9540931 10.0285064 4.1773677 5.0127385 NA 5.9143349 8.3566936 8.9468513 10.6212884 3.7528770 7.8256546 6.6186865 9.9912768 6.5870934 9.4481919 -1.4949221 10.6981618 5.4474602 3.7903446 9.5175481 4.8362221 7.5411183 9.0917842 9.6212883 9.1011342 NA 12.9254311 1.0899049 9.9159257 NA 6.7670390 4.5049445 8.0974017 8.1738295 13.401298 6.781069 8.339415 12.785280 10.066232 10.558531 12.495669 11.694923 9.661660 11.064800 12.844029 11.179357 9.192320 8.535612 1.826884 7.623886 11.893365 10.555813 6.785715 8.476488 9.411083 8.935397 9.776197 7.654692 7.331493 10.464584 5.743348 1.674867 4.790345 7.578925 11.502830 10.120574 10.333874 8.912212 12.107063 7.546604 9.614775 10.811861 11.784555 9.629712 10.609871 9.224333 1.964362 9.350615 7.232865 8.358254 11.244514 9.011748 9.884323 10.933043 7.829125 12.738065 10.231163 10.704617 12.403735 9.928586 9.310688 3.897260 TCGA-A2-A0YI 62 0 NA 441 breast stage ia t1c n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 80.55.0 5 5 2 5 2 2 3 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 1.39057e-07 11.5220744 8.1980973 7.2256605 11.3392578 -0.7458898 10.4544029 NA 10.2170133 11.1468499 8.0305502 9.7364210 8.3107550 9.1413380 8.5372056 7.4901313 9.7683382 9.3936687 10.2108565 7.6182519 1.0614997 9.7893926 9.4641798 14.0062627 10.6785461 9.1481771 10.8713552 7.4215355 10.0473061 -0.7458898 2.1610170 9.4265449 12.3116861 12.3429056 7.0550177 12.5723776 13.4911779 9.1557384 6.8614480 4.6970621 6.7217226 8.7114983 9.6693308 7.6719698 13.1470395 -1.7456478 10.6879635 13.6714095 6.1549841 9.3353877 10.2961186 8.4660055 8.7155969 NA 14.5490866 9.4032294 4.1367574 8.4252940 1.2541102 5.6635069 10.2576352 10.7749815 11.0424278 11.4664617 10.3039659 9.9997916 3.9545593 11.7699403 9.9436786 4.7619129 8.6856150 0.5760867 11.2104935 14.3828971 8.7301648 11.6168831 11.4259196 8.5055996 0.2541102 2.2541102 8.8798261 10.0921394 11.9423676 0.2541102 5.2313978 7.0964674 9.7419574 10.9194532 5.8761682 8.0206461 4.6291584 10.6171569 11.6337664 4.0354744 13.5203182 5.4537908 7.5325671 12.3873398 11.4403864 13.0087439 7.7638922 10.3626418 10.5194393 10.4624827 10.6091931 4.9265403 8.0023104 11.7624073 10.5412525 -0.7458898 10.1074269 9.1980973 3.0090067 3.4340277 10.0586517 10.6730240 9.7464713 9.3188600 14.9932518 10.2604434 10.2068586 8.9666445 2.8390727 16.0804672 9.6824774 13.1293387 12.4026733 9.8433004 8.9096480 8.5406752 10.2396071 0.41373000 0.41373000 0.40861000 -0.00013862 -0.00013862 0.00402430 0.00000000 -0.00083160 0.00097064 0.00278820 0.00278820 0.00278820 0.00069327 0.00069327 0.64983000 0.46776000 -0.41696000 -0.00586190 -0.00263220 -0.42963000 0.00055459 0.00208050 -0.00995650 -0.00995650 -0.00995650 -0.01119800 -0.01119800 -0.01766600 0.00319100 -0.45297000 0.41373000 0.00319100 -0.00013862 0.00402430 0.00402430 0.00000000 0.00000000 -0.00083160 0.00097064 0.00097064 -0.00055444 -0.00055444 0.01419000 0.00277450 0.00277450 -0.00415460 0.42016000 -0.00093836 -0.00093836 0.00694350 -0.41696000 -0.00586190 -0.00263220 -0.00027724 -0.42963000 0.00055459 -0.00208170 -0.00097017 -0.00995650 -0.00995650 -0.32994000 -0.01119800 -0.02098800 0.00319100 0.00694350 -0.00512270 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.8948141 12.5837034 6.0223012 10.0786783 4.4022378 10.6351194 2.8979761 NA 8.2155670 7.8048641 -0.7458898 7.6815561 1.9545686 9.7708023 9.2024846 1.2541102 9.5279129 9.2902910 9.9471686 8.8163597 9.6823257 8.5103259 10.4259196 5.5209031 9.7648815 9.9997916 3.8688250 2.2541102 10.0014711 3.7135529 12.4729076 11.5032308 8.3255798 10.0448730 9.4006861 8.8825630 5.0996066 1.4240621 0.8390727 0.5760867 7.9922093 8.5406752 10.2028495 5.0090067 7.3344548 6.4829354 10.5035271 5.6549968 9.4984811 NA 11.7596808 3.6464392 5.2653431 9.6859962 5.0433270 7.4439423 9.4895333 8.8798261 8.5533252 NA 13.7216910 1.0614997 10.4892340 NA 8.3026042 6.0614716 7.9666445 8.8324901 12.6942727 3.5760504 8.6980969 12.5723776 10.1911233 10.8353179 13.1470395 12.5784385 8.8669858 11.1165609 13.2455063 10.1113208 10.0921394 8.7698170 -0.7458898 7.2957763 11.5200253 11.485038 6.684571 9.452562 8.671970 7.416509 10.853247 8.337596 9.367208 10.678546 6.919453 1.576038 5.341580 6.243086 10.498481 10.931176 7.441469 7.301241 13.253236 8.549886 11.042428 10.824922 11.205038 9.899776 11.134849 9.023129 NA 9.055834 7.735090 8.459911 10.919453 6.717642 11.246096 10.617157 7.744025 14.131569 9.685093 9.965784 13.260443 9.949781 10.080269 3.298512 TCGA-A2-A0YJ 39 0 NA 566 breast stage iiia t3 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 74.60.0 4 4 4 1 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.526373e-06 2.42832e-07 12.7549133 NA 6.9021870 12.6032876 -1.2976084 10.4916411 -1.2976084 9.3907655 11.1303517 7.1371428 9.6243561 7.4773025 8.7632110 9.8188590 8.6479588 7.5130864 9.1721569 10.7158378 8.3890156 4.5098732 8.7979121 12.2699959 13.7221492 10.4981489 10.0176646 10.5870672 2.7025246 10.7601549 8.5774964 -1.2976084 6.6154045 9.9757279 11.8727531 4.3172245 15.5366775 12.9057866 11.8023560 5.3172245 1.8724348 8.6826548 8.3481735 6.8873900 5.4304358 3.6094004 -1.2976084 13.0964418 5.2103109 10.1161430 9.3549746 10.9207756 7.9856035 3.7469039 2.8724348 13.2358460 7.4304358 -0.2974311 10.7753176 NA 3.4029541 8.5290635 10.6420943 10.2142678 9.5667012 10.8538488 9.9040264 12.5874487 11.6363901 11.5571887 3.2260769 7.4574022 8.8535316 10.6369431 15.1397470 7.0831059 12.0038684 11.2638030 11.0628135 1.7025246 NA 8.4372248 9.2571040 11.4081475 -1.2976084 3.6094004 7.0991195 10.3061415 10.3144620 5.4706995 5.2416724 4.6094063 11.2370611 11.1888473 1.2874723 13.3456385 2.6094004 6.1033948 12.1532109 14.7111188 12.3342605 7.6183943 12.9140992 11.8084236 11.2231780 10.7465676 4.6567137 7.8749426 11.5933493 9.4822344 3.0948272 9.8768167 10.5487890 2.4029677 3.1691393 9.6726210 9.6213783 9.9873392 9.9216836 14.1829582 10.3784721 10.7144411 5.3890161 2.7899796 11.4723529 7.7137425 12.4574026 12.9438280 9.3373262 9.0356704 7.3642931 10.3311019 -0.31213000 0.59476000 0.59476000 -0.00152430 -0.00152430 -0.22625000 0.00041593 0.32334000 0.29047000 -0.64283000 2.20820000 1.51350000 0.79820000 3.65690000 -0.21528000 0.28200000 0.28200000 0.42805000 -0.00010264 0.27379000 -0.30944000 -0.20970000 0.20932000 3.65690000 -0.29638000 0.22978000 -0.31949000 -0.60071000 0.37693000 -0.28346000 -0.31213000 -0.14605000 -0.00152430 -0.32100000 -0.23374000 -0.62325000 -0.62379000 0.32334000 0.29580000 -0.33918000 0.99800000 0.29915000 -0.64283000 -0.00304750 -0.00304750 0.88406000 -0.00443120 -0.32623000 -0.61961000 -0.29801000 0.28200000 0.00402430 0.00000000 0.00000000 0.58847000 -0.30944000 -0.20970000 -0.02562000 0.20932000 -0.27512000 0.59458000 -0.17234000 -0.56406000 0.37693000 3.65690000 -0.09894500 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.601 -0.601 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.601 -0.601 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 5.8317987 13.2700553 2.4029677 7.9646100 3.0579527 14.1025606 -1.2976084 3.2874723 8.5713378 6.7632110 9.4295846 8.7819999 1.0244615 10.4046877 8.8395062 0.7024802 2.1619522 11.7112938 7.0423653 8.6926190 8.7342026 6.6508823 11.2841865 -0.2974311 10.0829761 9.9040264 1.8724348 NA 10.0644589 1.0244615 12.7910549 12.4476642 8.2299921 10.0639106 5.0600690 10.0942957 -0.2974311 2.0244261 -0.2974311 NA 8.6139069 8.9119684 4.4838738 4.0948357 8.7856221 6.7739779 10.2113003 6.7899783 9.5034149 6.2723704 13.6148899 4.1287800 2.0244261 9.9691963 7.7523639 3.7469039 7.0775549 5.8110394 4.6094063 11.5721089 13.4851038 -0.2974311 10.8143028 -1.2976084 9.4657274 3.6567137 8.1392265 8.9228933 10.563990 6.457402 8.296840 15.536677 9.771293 11.026696 3.609400 10.735250 9.427029 11.483055 13.200741 12.630663 9.257104 7.844622 3.226077 7.867422 12.253021 10.922893 5.457404 8.695453 8.894808 8.686934 10.389059 4.060065 5.389016 10.498149 4.430432 -1.297608 8.607902 8.642961 13.780874 9.622123 8.452385 8.425323 8.340951 3.872445 10.214268 9.800547 11.604890 13.409766 10.630293 10.065007 NA 9.917836 6.249409 4.024444 10.314462 4.702513 10.334242 11.237061 7.877441 13.274623 9.776657 10.677288 12.226077 10.909835 9.593539 1.024462 TCGA-A2-A0YK 61 0 NA 588 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 74.60.0 8 2 2 5 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.509738e-06 1.769205e-06 10.8746650 9.9075922 7.0267790 11.1147121 1.7008392 10.7773678 NA 10.3728815 11.9507527 8.2891474 9.7900788 8.3732745 8.9307362 10.4649835 6.0931672 9.6876394 10.4873003 10.0061509 8.8255449 5.8972453 10.6479178 10.0850333 11.8382673 11.1781577 9.7476700 10.5845106 8.5657232 10.5167625 1.7008392 2.4378136 10.0372318 13.3944813 12.7400729 7.7953670 12.0751641 12.8759135 9.8111149 6.3701277 3.9232443 7.1783830 9.6190498 10.2920598 7.9360655 12.4380026 1.3382818 10.9859945 12.8173375 7.6183870 9.1061135 10.4336761 9.4624004 5.7883125 -1.4691302 14.4448034 9.8494669 4.9903559 8.7476700 0.8528778 5.6806704 10.3350552 10.4043682 9.6653505 11.8846223 10.1502271 10.3939489 2.9232443 11.6401018 10.3265580 6.4967084 8.0778187 6.5024675 10.2507408 14.7348265 8.5292607 11.5379514 11.2440958 8.9964904 0.5309696 5.8347036 8.7847716 9.5539854 12.8071213 0.8528778 4.7977082 7.2486003 10.2912283 11.4198576 6.3511035 7.9780074 4.6183855 10.8108249 11.9138183 NA 13.4741257 4.0855096 7.7717153 12.0692344 12.2544784 12.9508185 7.0227773 9.6256617 10.7296761 10.7333480 11.7553781 5.1891366 8.1215112 11.6422229 11.1995876 1.1158989 10.1570895 9.0826323 3.4378136 4.3125490 10.5242164 10.7491846 10.1377919 9.1593696 14.9971600 10.1493097 10.0222763 8.0661995 4.3122803 14.9862835 9.5670978 13.2485470 12.9835515 10.1092968 9.7818147 8.8070486 10.1658395 0.14221000 0.14221000 0.14221000 0.00000000 0.00000000 -0.00277070 0.00055459 -0.00069303 -0.00069303 2.20700000 -0.00332430 -0.00567570 0.00499690 0.00499690 -0.00610030 1.31910000 -0.31389000 0.00277450 0.00277450 -0.00027724 0.00722170 0.00708260 -0.29886000 -0.29886000 -0.30659000 0.00249300 0.00249300 0.01427600 0.02146300 0.14221000 0.14221000 -0.00318590 0.00000000 -0.00277070 -0.00277070 0.00055459 0.00055459 -0.00069303 -0.00069303 -0.00069303 0.00208050 0.00048091 -0.31914000 -0.06742300 -0.06742300 -0.06742300 0.01014600 0.00499690 0.00499690 0.01433000 -0.31389000 0.00277450 0.00277450 0.00277450 -0.00027724 0.00722170 0.00708260 -0.30122000 -0.29886000 -0.29886000 -0.31307000 0.00374650 0.01427600 0.02146300 0.00374650 0.02511000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 11.0064043 12.2166585 3.1747739 10.2369885 7.2398353 10.9859945 6.5365487 2.8528578 8.4332992 9.7293692 -1.4691302 8.8690478 4.5082068 9.5024677 9.3904590 0.8528778 10.9116558 9.8906738 10.4150946 8.8573537 9.5907283 8.5238626 11.9127374 4.4378136 8.9498308 10.3939489 5.6704750 NA 10.4181447 4.0227761 12.9941292 11.9396519 9.3015881 10.5543319 9.2139188 8.8785454 5.9403148 0.8528778 NA -0.4691302 8.1855603 8.4660891 10.3052995 6.5588309 8.4301903 6.1382554 9.8950588 6.0623052 9.4348061 2.7788604 12.1370980 5.7693301 5.4497858 9.3850602 5.5017767 7.8774381 9.8757748 9.7723114 8.2908123 1.1158989 13.8405426 2.3382818 10.2265874 NA 8.0797461 6.8392630 7.8906735 8.5463393 13.183719 5.022776 8.575318 12.075164 10.571214 10.318419 12.438003 12.170604 8.851725 11.076371 13.170830 11.042924 9.553985 7.192702 1.115899 7.185560 11.245814 11.134087 5.948776 9.181078 9.324527 7.623681 10.498064 8.814013 8.876329 11.178158 5.496708 1.700839 7.347907 7.123194 11.903245 11.312284 8.313922 7.899431 12.045885 9.074923 9.665350 10.670156 11.594656 10.682575 10.758540 8.933936 2.231371 9.358283 8.215112 9.281631 11.419858 6.634211 11.215015 10.810825 7.754926 14.227266 10.060355 10.540753 12.644178 10.533739 9.967115 4.720749 TCGA-A2-A0YL 48 0 NA 1474 breast stage iiia t3 n2a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 4 white not hispanic or latino 74.60.0 2 2 2 4 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 1.39057e-07 10.91821664 7.63376976 8.10918920 10.89170466 2.05807401 10.65054172 0.35760830 10.47203808 11.95523204 8.24334157 9.85349998 8.14554755 9.29869268 10.06457262 7.19369488 9.33921223 10.57226764 9.78443397 7.92560132 3.84949893 10.46322620 10.46975861 11.71258306 11.12438093 9.88120698 10.64593434 6.01585657 10.61650547 -0.64227910 2.05807401 8.65914108 13.63721930 12.76404933 7.91223369 12.12510530 13.59988872 9.49655662 7.62910813 5.13900282 7.45304176 9.24410358 9.48692791 8.45699296 12.52600372 4.33492576 10.77523380 13.45592387 7.07532190 9.11502674 10.83616187 5.41292714 3.56709514 -0.05739166 13.93749271 11.12810242 3.71520150 8.46355339 2.44511751 5.39106654 10.17182693 10.31619768 9.70913638 12.37218860 10.59425723 10.24866920 5.98700246 12.01295211 10.26039692 6.64304661 7.98335392 7.07874431 11.61988670 14.85903126 8.29554855 11.03404290 10.93483779 8.97786490 0.94260834 1.81709110 9.03095399 9.49014470 12.54197799 -1.64250430 4.28838071 6.84949768 9.91223384 11.59575115 7.52757005 5.85749089 5.31184094 10.36326954 12.14013138 2.52757084 12.97062865 6.47658583 7.57439068 12.80110661 12.69275617 13.08205227 7.92939749 10.20195848 10.87875461 10.75570455 11.87445303 5.36887309 8.48950199 12.41207974 11.73241282 1.16497931 10.12417393 9.18101233 1.81709110 4.14162897 10.27427086 10.80730952 10.05765117 9.06414104 14.75867448 10.29022890 9.86939767 8.36747372 5.07189135 14.95815322 9.61797650 13.39033648 13.25582121 9.99788993 9.87777262 8.77127288 10.20191524 0.00221930 0.31520000 0.31835000 -0.00318590 -0.03163200 0.00110930 -0.00248630 0.00138680 -0.00152430 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00541390 0.00305220 0.00305220 -0.33248000 0.00332990 0.00972760 -0.32333000 -0.32333000 0.77502000 0.00305220 0.00305220 0.00305220 0.00460500 0.00221930 0.00221930 -0.00041585 -0.31681000 0.00110930 -0.00195720 0.00000000 0.00000000 0.00138680 -0.00152430 -0.00152430 -0.00488750 0.00186010 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00305220 0.00305220 0.00305220 -0.33248000 0.00332990 -0.00661150 -0.32620000 -0.32333000 -0.32333000 -0.15157000 0.00305220 0.00305220 0.00917050 0.00110930 -0.00055444 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.42843681 13.37310360 9.12995964 10.18459062 3.83175566 10.76570935 2.26453643 1.35766460 8.60794351 9.28394098 -1.64250430 9.35312962 4.35764349 9.84146072 9.21873201 -0.05739166 9.59306090 9.87235907 10.98973140 9.20078093 9.47177782 8.15043528 10.75317913 3.35765053 9.47073594 10.24866920 4.60557137 -0.05739166 9.75103551 4.46617029 13.67939697 12.02386900 8.64189062 10.13119628 9.17782388 9.22492369 5.80885609 1.94260834 -0.05739166 3.21563201 8.33349306 8.20939390 10.33241805 5.73268436 7.56763443 6.25246297 9.71189441 6.66142611 9.91319281 NA 11.62164770 4.28838071 4.62443433 9.75031122 6.01821131 4.24029143 9.77285855 8.29281027 6.32918819 -1.64250430 14.21907120 2.60556545 10.05548133 NA 9.37793040 6.01585657 7.84548503 8.21873177 12.8109709 5.2645364 8.4984747 12.1251053 10.0795986 10.4888589 12.5260037 12.3277509 9.5990323 11.3254116 13.4304894 11.9687851 9.4901447 9.1083520 -0.6422791 8.5474695 11.4242388 11.33062478 7.74134900 9.12002710 9.60141406 8.24334157 10.32053737 6.60081833 6.43979432 11.12438093 5.94260834 4.94260834 8.03183737 6.60258010 12.91085429 10.54437826 7.79643682 7.89680404 13.11513918 5.76703501 9.70913638 10.43278981 11.57014137 10.62326003 10.94893354 9.69582422 -0.05739166 9.05564632 8.37674923 6.90839142 11.59575115 7.61738812 11.07731191 10.36326954 7.47398899 14.58149588 10.08130594 10.47658603 12.55632025 10.78259859 9.93176548 2.52757084 TCGA-A2-A0YM 67 0 NA 965 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 74.60.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 1.838585e-06 4.509738e-07 11.4532266 3.3237880 4.6457189 11.0319630 0.2363395 11.5583982 -1.7636605 9.6151660 11.8755569 8.9350339 9.4931277 8.1005152 9.8343818 10.1773768 7.4818818 8.7191372 9.8801855 10.2013920 8.5717197 6.0045126 9.8747652 12.0652591 12.9112939 11.5624778 9.6993427 10.3758806 5.7985716 10.8094983 4.0692210 2.9912089 8.8738596 11.6974249 13.3365398 8.8184713 12.0024440 12.2926283 10.3546214 6.3077910 3.8510394 8.1714941 9.0485065 10.4149940 6.0628772 5.5401110 -1.7636605 11.7002367 8.5389680 10.2075136 9.2991782 11.1322831 5.9777951 6.3448533 0.2363395 13.5667777 9.7923563 -1.7636605 10.9746326 -1.7636605 3.3237880 8.5298010 11.5652846 9.6998537 9.9131678 9.7156043 9.7779098 5.7201444 10.7882778 11.2592172 4.6957600 7.2447577 1.2363395 9.2384410 15.6625285 10.0875160 11.9708272 11.6112328 10.4442586 1.6957712 -1.7636605 9.2902551 10.0829950 9.2745624 NA 2.7599015 6.9878734 11.6281098 10.6334691 4.2807262 7.2697523 7.1281129 8.5275001 12.1846965 1.0436945 13.6024807 2.2363395 6.5850572 10.9930940 13.6190208 13.0698618 7.2164684 10.6836708 10.7284328 10.3932624 11.6519390 5.4340377 8.4087569 12.4546654 8.1876139 -0.7636605 9.4925380 10.6425343 2.5582676 4.3492379 10.0755330 10.7569479 11.0040999 9.3688290 14.8189270 10.8786066 10.4276970 6.4310864 -0.1786980 11.3991926 2.8801761 13.2254132 11.0786795 10.3832161 9.6135398 7.0943100 10.4783719 1.30880000 1.04220000 0.35512000 0.01754400 0.57905000 0.05128600 0.37792000 0.82645000 -0.05482500 -0.02452400 1.10150000 1.08010000 0.38982000 -0.00055444 -0.07427700 -0.01409000 -0.01409000 1.04150000 -0.04183800 0.73492000 -0.42298000 -0.39408000 1.36780000 0.36657000 0.73303000 -0.00816240 1.42590000 -0.43148000 0.00013863 0.01474900 -0.03040400 0.39297000 0.01754400 0.05128600 0.27498000 -0.43279000 -0.43550000 0.90593000 0.72716000 -0.03422300 -0.02728700 -0.41388000 -0.41805000 0.36628000 0.37002000 0.00485790 0.38899000 -0.02375700 -0.01349400 -0.44070000 -0.41509000 1.04150000 -0.42953000 -0.03040400 -0.41542000 -0.01161100 -0.38884000 -0.40030000 -0.01119800 -0.01243800 -0.46121000 -0.00816240 -0.39697000 0.02777800 3.65690000 -0.00484610 0.390 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.360 0.360 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.365 0.390 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.360 0.360 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.365 7.5446685 13.2683750 4.0943121 9.4597277 3.2807188 11.5956670 1.0436945 7.1641074 8.3237920 8.2820890 4.3448569 9.2613649 1.2363395 10.7591559 9.0810349 2.2363395 6.2021140 9.8528781 6.8620385 8.5905784 9.3919002 6.4699495 10.8154094 3.0943036 8.6688712 9.7779098 0.5582676 NA 10.0822113 2.6286570 12.3275167 12.4230625 7.0307455 9.0644658 12.0610891 9.5683658 5.1905240 2.1432301 -0.7636605 3.5938796 8.2983756 8.2738762 6.9744215 7.0242321 8.8773875 6.7480815 10.1273534 4.8362423 9.8579233 1.5582676 12.3201409 4.5582554 4.3237952 8.7487933 7.3292187 4.1670688 9.5789595 8.6026514 5.5492133 8.0927545 13.5354657 2.4842671 10.0485065 -0.7636605 8.7161095 1.2363395 8.0628778 6.9912168 10.986199 11.123359 7.972731 12.002444 10.075533 10.616790 5.540111 11.015433 8.617872 11.601259 13.785603 12.737047 10.082995 7.170020 3.851039 8.923705 11.191616 11.8726140 5.2136078 9.7822590 10.0368247 8.3158139 11.6142541 7.2078724 6.4457830 11.5624778 11.0672405 1.2363395 10.1905256 9.2569689 13.5718243 11.0515123 8.6307920 7.8510394 9.5722779 6.4310864 9.6998537 10.0731686 12.4246090 12.7301222 11.3836932 9.4137487 -0.7636605 8.9568727 7.4603306 5.2250127 10.6334691 7.1788441 11.4878117 8.5275001 8.0655131 13.7342434 10.0221904 9.5401100 12.7296218 12.4019429 9.9987113 0.8213020 TCGA-A2-A0YT 56 1 723 NA breast stage iiib t4b n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 74.60.0 3 1 1 3 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.112456e-06 1.946798e-07 12.5453216 6.8643434 6.5399079 11.4320884 NA 10.1748721 -1.8905726 10.7257751 11.5449961 9.4537519 9.5262535 7.4559699 8.7360778 9.6231836 4.5357233 8.8801198 10.6381543 9.8747421 6.2541140 5.1969178 10.9326242 10.0856621 15.2962667 11.5180511 8.6859405 11.2161826 5.0042722 11.1002584 -1.8905726 -0.3056101 8.3140271 12.9263397 12.2612654 5.7388138 12.5965424 14.2794202 8.1387433 3.3948571 NA 5.4223407 8.4559699 9.1748723 5.1318240 12.3797514 0.4313555 9.2205916 13.0513290 1.4314090 9.3227608 11.6829849 5.4844959 8.0327836 1.9168206 14.1360415 8.0073015 0.6943899 8.6755100 NA 4.6640447 10.3963025 10.4650824 9.7474393 10.2636413 9.7636444 9.3508433 6.4313839 10.9970574 9.6068090 7.0073020 6.3809199 8.4768709 10.8605816 14.7318082 8.6089334 11.4648071 11.2978903 7.4223390 0.9167823 3.5357171 7.6033118 9.9859730 10.0490352 -0.8905726 3.5688834 7.2074878 10.8655953 10.8852720 6.4177951 5.2793821 3.6944234 10.6174983 11.4217718 3.1538540 12.8400323 6.2843809 6.8237010 9.7937663 12.7589929 12.7238783 8.1009776 10.8422594 10.3826689 9.5484869 11.4155177 4.9674361 8.9216333 11.9157035 9.5060608 -1.8905726 10.2393830 9.2264498 -0.3056101 3.0650552 9.6592406 10.8460694 9.1435671 9.4752316 14.9753222 10.8566001 10.1896074 8.0895956 2.4313823 15.1179612 4.4844926 11.1778984 10.9886564 10.1404680 8.2438823 8.1876069 10.5385044 -0.3080300 0.5574400 0.5574400 0.4307500 0.4263800 0.3362600 0.6688200 0.1095000 -0.2831100 2.1814000 2.2542000 2.5062000 0.0000000 0.0000000 -0.5208200 2.9492000 -0.5285900 0.0213230 1.0797000 -0.6674400 -0.2613100 0.0666270 -0.2716400 -0.2716400 0.5318600 -0.2414300 -0.2414300 -0.2415600 0.7198700 0.0297470 -0.3080300 -0.2614300 -0.6130700 0.3346400 0.3209300 0.0324220 0.0427320 0.1095000 -0.2831100 -0.2831100 -0.2660000 -0.2822700 -0.6487400 -0.2760700 -0.2760700 -0.2760700 -0.2760700 0.0000000 0.0000000 -0.5208200 -0.5289000 0.0037465 -0.2907100 -0.2907100 -0.3011000 -0.2405800 0.0627940 0.1316900 -0.2716400 -0.2716400 -0.6199700 -0.2414300 -0.2414300 0.0806010 -0.6286500 -0.2591400 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.100 0.372 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.100 0.372 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 7.4692055 11.6111688 5.9486592 9.0730747 3.4313823 10.8799135 0.9167823 -0.8905726 7.9280380 6.0519702 NA 8.4406529 0.1094274 10.8887650 9.1882741 3.2387410 8.2257998 9.6157637 6.4537513 10.7156298 10.3662220 7.5230836 10.3544145 2.6944122 8.3298345 9.3508433 5.1755446 0.4313555 10.6626053 1.5689077 11.8089200 12.5433022 7.3091280 9.7968317 10.0913800 9.3042128 4.2387410 1.4314090 NA 4.4132353 7.8825954 8.1741987 10.5598940 3.6013043 8.6119101 7.7019129 10.2101184 6.5399079 10.4650824 NA 10.4375699 3.5017703 3.6944234 8.9515470 5.0929051 2.5688834 8.5294161 8.1470029 9.9557300 2.4313823 14.0971197 0.6943899 11.2092969 NA 8.0193489 5.0636539 8.3430755 9.0178487 13.5848678 6.5892362 9.1975816 12.5965424 9.2881209 10.9711246 12.3797514 10.2699578 8.2451652 10.7156298 13.0629250 10.3478607 9.9859730 8.1955922 0.9167823 7.8643434 13.3023653 10.8388643 6.2743623 8.7497009 8.6897146 9.1699290 10.3315325 5.3189097 10.0716290 11.5180511 7.6388869 2.5688834 2.9674453 9.3352117 9.6162595 10.1952604 8.9798207 8.5760425 12.5241413 3.7533157 9.7474393 9.9296349 12.9720450 9.9087377 10.6551446 9.3514393 6.8973590 8.6521882 7.3823422 4.2992813 10.8852720 4.6486150 10.0324121 10.6174983 7.9863717 12.5778255 10.9332213 10.0170978 11.9882733 9.9829002 9.2140548 0.1094274 TCGA-A2-A1FV 74 0 NA 714 breast stage iib t3 n0 (i+) m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 109.61.0 NA NA 5 3 NA NA 1 1 3 1 3 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.668684e-07 10.4947530 8.2292211 7.8112546 10.7942943 1.7432133 11.6723328 2.8687460 10.8804329 12.2274826 8.2681958 10.2585504 8.8507825 9.0014538 9.6495530 8.6760946 6.6803820 10.6777040 9.0838683 7.2495620 2.4537019 11.0560918 9.1625945 9.7047902 10.9010151 9.2703304 10.5596108 2.1906781 10.9911364 1.0911243 1.4537019 8.6369240 11.9312357 13.8716506 6.7994772 12.4515874 12.9338754 7.1816224 8.1495104 5.3818094 8.5446967 8.6835891 7.4130600 8.2145144 13.4277982 3.9562054 9.0911323 14.7171182 3.3712382 8.4078987 10.9575280 8.6057054 9.8984871 -1.7164338 11.5977132 5.9702785 2.6760868 8.2894020 -0.1313132 5.1039550 10.4499404 11.2054323 10.0634966 12.5133472 10.7718685 9.6577300 5.6325067 12.8140007 9.8224512 6.6057047 5.7756300 4.6760925 10.9119949 14.1071943 9.4014594 11.5771052 11.9677588 8.9588522 0.6056840 5.9772639 5.9491123 9.8989472 10.2581918 NA 6.9419889 5.5691781 11.4252459 11.2640954 6.7554524 3.9842156 2.2837736 10.0527886 12.4458539 0.2838033 13.1512491 6.3498659 8.6302912 11.4075754 10.7793825 13.6929361 7.1071449 9.4852885 11.9093720 11.5992538 11.8994069 5.0651371 7.5101897 12.6035905 13.5819473 1.8687263 9.4593269 9.7324098 2.8073343 3.6107473 10.8832253 9.6787758 9.8209957 9.1793526 15.0890803 10.2703305 10.8041504 9.1996566 4.4932310 16.6320256 8.9103990 11.9098285 11.1814337 10.5122953 9.1831341 8.1633604 9.8993932 -0.0033243 0.8031500 -0.0044312 -0.0276710 -0.0351760 0.0416000 0.0000000 0.0151680 -0.8742400 3.6569000 1.4293000 1.5993000 -0.0037232 -0.0078863 0.0106490 -0.0065961 -0.0065961 -0.0136770 -0.0136770 -0.8978200 0.0108420 -0.0378980 0.7997500 0.0329860 0.0329860 -0.0084385 -0.0084385 -0.0084385 -0.0027707 -0.0033243 0.8031500 0.8327400 -0.0276710 0.0416000 -0.8406600 0.0000000 0.0011093 0.0151680 -0.8754100 0.0054139 1.2768000 1.2777000 0.0052749 0.7364400 0.7364400 0.7364400 0.7364400 -0.0078863 0.0242680 0.0339720 -0.8668800 -0.0136770 -0.0136770 -0.0136770 -0.8309800 -0.8621600 -0.0378980 -0.8930400 -0.8667200 0.0329860 0.7964600 -0.0031859 -0.0084385 -0.0027707 -0.8359200 0.8188400 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.246 1.246 0.000 1.574 0.736 0.736 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.246 1.246 0.000 1.574 0.736 0.736 0.000 8.0453283 10.8656839 9.4007710 8.7595107 2.9680354 10.2953540 0.6056840 0.8687658 8.7595107 8.9570864 -1.7164338 8.8821836 3.1417597 10.6371999 9.1944200 1.4537019 9.6006245 10.1838893 9.5059685 8.0911323 9.3701126 8.3512118 11.0490634 1.6829328 8.7544363 9.6577300 2.8073343 -1.7164338 9.6275182 4.9419889 12.1610614 11.4268416 10.6211204 10.1766995 6.8229366 8.8287417 8.8200245 1.0911243 -0.7161967 5.2724637 7.4980961 6.0781935 10.7409016 6.4537019 7.3808351 4.3498677 9.4574543 6.4486846 9.6208417 -0.7161967 9.6006245 4.1664182 6.1906682 10.6512111 4.7132284 1.9842248 8.4143478 8.1055513 3.1417597 NA 14.0059711 0.8687658 9.2085897 -1.7164338 7.6347167 7.6653203 8.6023199 6.2262927 12.5158204 4.1664182 9.0919370 12.4515874 9.2204153 9.9776998 13.4277982 13.9250106 9.7715169 11.1087360 13.1048038 12.3391445 9.8989472 6.9876813 -0.7161967 8.0911323 10.8860122 11.410320 9.207105 9.040334 10.383125 9.243779 11.058935 3.984216 5.522181 10.901015 5.605705 4.065133 4.927636 5.659077 10.981614 9.297100 8.221887 7.352556 12.456517 3.984216 10.063497 9.866860 12.602038 8.782626 11.077177 9.026929 1.605684 7.664995 8.324930 3.676098 11.264095 5.522181 11.460106 10.052789 7.707944 15.274701 10.023558 10.200403 12.628073 9.922666 10.931461 3.328176 TCGA-A2-A1FW 62 0 NA 528 breast stage iiia t3 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456992e-06 7.284961e-07 12.2603798 6.9475843 8.7687447 11.9107025 1.4170559 11.6348925 -0.7529232 10.8837690 12.4010922 12.6478237 10.4465100 8.5769408 9.7697260 8.5936582 7.5394659 8.6221840 10.9829120 10.3326169 6.7429992 2.6394637 10.6581257 8.3172652 14.0775606 12.1813881 9.7479863 11.5416216 4.5139328 10.7512185 -0.7529232 -0.7529232 8.4006963 12.1508380 13.5616568 6.9371419 11.5355779 14.0979173 7.3530533 6.2071471 2.9475914 5.4759636 9.1947812 9.0136733 7.0736928 13.7934058 5.2915373 8.2915386 14.7376349 1.8321204 9.2113914 12.3577908 8.1808351 8.2129287 2.2471376 12.4006584 8.5186075 7.9406313 9.3299586 0.2471984 4.6394637 10.9462830 10.2453822 10.2583717 9.8828625 10.3667340 9.4547689 0.8321204 12.0758759 9.8311674 2.8909914 7.4541586 7.4245636 11.0492568 13.6803386 11.0009649 12.2679507 12.3242104 6.8618537 1.0545012 6.8728534 8.1734403 10.2973331 10.8997654 -1.7529232 4.5509253 6.4855492 10.7249026 11.2846913 4.5509253 5.3024251 3.9195689 10.8860328 12.4964801 5.8470573 13.5843830 4.0545012 7.5847664 10.2531197 10.0211078 13.0420679 7.8636932 10.6060703 11.2235295 10.8105790 11.9302486 5.7147511 8.6308488 12.4475066 12.2775529 -1.7529232 10.0095265 9.8521609 0.2471984 2.7775986 10.1031808 11.0762725 9.9388880 9.3937131 15.1797513 10.4079612 10.8393678 8.2499596 3.5690779 16.2017724 9.0561085 11.4996620 10.6859362 10.2439709 9.2414977 9.2042464 11.0315891 -0.235330 1.738600 -0.193870 0.169260 0.166470 0.231790 0.179200 0.197860 -0.272620 -1.240100 -0.246670 1.927200 -0.278580 1.144200 1.013400 1.325100 -0.224530 0.407440 0.628250 -0.254310 0.212530 0.188590 -0.304510 -0.782690 3.656900 -0.311670 -0.311670 -0.311670 1.211400 -0.291770 -0.255510 -0.239600 0.089468 -0.239850 0.256680 0.621140 0.172570 0.197860 -0.272620 -0.272240 0.665120 -0.747770 -1.292900 -0.285010 -0.269850 -0.276070 0.132430 0.196190 -0.293670 1.013400 -0.312700 0.407440 0.628250 0.595500 -0.254310 0.117410 0.195120 0.158610 -0.315990 -0.782690 -0.276670 -0.311670 -0.311670 3.656900 -0.816630 -0.298630 -0.264 -0.264 0.780 -0.233 0.628 0.628 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.257 -0.257 0.166 0.166 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 -0.264 -0.264 0.780 -0.233 0.628 0.628 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.257 -0.257 0.166 0.166 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 7.9318928 10.5400411 5.9613895 8.1704719 3.1540323 11.0585191 -1.7529232 -1.7529232 7.7608723 6.1955110 NA 7.6565350 1.2471376 10.4732555 9.1175091 3.4950683 9.1947812 8.8093868 7.4735564 11.5919950 9.6289037 8.5290744 9.3425414 2.1540323 9.3451766 9.4547689 1.5690536 -0.7529232 11.2322747 2.7707022 11.8680515 11.5665343 6.8358584 9.7444973 9.6817727 9.0520822 5.9613895 2.5690779 -1.7529232 0.2471984 7.8302274 8.0973311 11.3091905 5.0800351 6.8282698 7.9818538 10.4989227 5.6308481 10.3911653 -1.7529232 9.3873352 2.4170829 4.1051249 8.8215014 4.2069167 6.2414970 7.3790014 8.9044627 6.4220698 NA 13.7969291 1.4170559 10.7853333 NA 9.2035205 3.2915446 8.4711460 9.3186068 15.367483 5.166008 8.726925 11.535578 10.504019 10.034639 13.793406 14.651804 9.049661 11.774844 13.597393 11.130742 10.297333 4.988612 2.054501 9.271591 11.895277 11.6638100 10.2304944 8.5701992 10.6016693 8.3621880 11.1617949 5.4759636 11.0217256 12.1813881 4.6046941 -1.7529232 2.7065748 8.1343652 12.1373136 10.3135700 9.4873394 9.6581256 10.4455894 5.0153281 10.2583717 10.4690336 12.2094982 7.8855805 10.7588970 9.6096362 0.2471984 8.5998719 8.4960325 7.1984293 11.2846913 6.3712661 11.1903918 10.8860328 7.4687316 13.4374321 10.1708433 9.9881900 11.9553661 10.3186068 10.5463524 0.8321204 TCGA-A2-A1FX 61 0 NA 1119 breast stage iiia t3 n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 11.1502753 6.2080607 6.9763911 11.6214880 -0.8847004 10.0173026 -1.8847004 10.3134425 11.2582092 12.2536562 9.8966640 7.6427817 8.7982991 9.2074009 7.0607478 8.5457568 9.8676851 9.3020377 6.9354833 0.9226546 10.8410967 10.2833497 12.6175146 9.5520160 9.0146613 10.4377960 5.1596978 10.2014373 -0.8847004 1.8157394 7.8668486 11.2781677 12.9840787 6.3537097 12.3024245 13.0602452 9.4529263 6.0753059 3.8966594 8.4110732 8.6230990 7.9210483 6.8966642 12.4800547 1.7002621 9.8592973 13.8363769 2.5747313 10.2960123 11.3224713 4.2027703 7.7965426 NA 14.2423056 8.4133669 1.4372277 8.7198577 NA 3.7002621 9.8601383 10.3718080 10.1648127 11.3424691 9.0622108 9.7939045 2.5076171 11.2626683 10.0131498 5.6071587 7.5788285 1.2852246 10.5488898 14.9136496 7.2380034 11.7987377 11.1488995 9.2490888 -1.8847004 3.4007019 7.8834889 9.0975850 12.6840918 -1.8847004 5.9607943 7.5478462 10.4922438 10.6758761 4.5246968 6.2080607 4.9226593 11.0763923 11.7478453 4.4190871 13.4517064 5.0460413 7.0724060 10.8485316 10.8724860 12.5420933 8.2650515 11.2529360 10.3444236 9.8660951 10.9922050 5.2027664 8.5920507 11.1569635 12.6091598 NA 10.2264401 9.6056540 1.5747313 4.4567536 9.6727681 11.1644723 9.9666631 9.6041488 15.1923897 10.9113440 10.4298877 7.7300142 7.4903439 14.8799039 5.7077622 12.3948425 10.5742236 10.1043440 8.9639272 8.1307193 10.6187748 -0.3750400 0.7545200 -0.3805500 0.0065814 -0.0055730 0.0197830 0.2093200 1.1346000 -0.6991000 1.1154000 1.1154000 1.1154000 -0.2469100 -0.2469100 0.4939600 3.4080000 2.2196000 -0.0012473 0.0072217 -0.0368100 0.0241270 0.0000000 0.1448800 0.1448800 0.1448800 -0.0850590 -0.0850590 -0.0850590 0.4437600 -0.3750400 1.5093000 -0.2980400 0.0065814 0.0197830 0.0197830 0.2093200 0.2093200 1.1346000 -0.6991000 -0.7428800 -0.0369690 -0.0055018 -0.7135500 -0.6995600 -0.6987500 -0.6987500 -0.7675500 -0.2469100 -0.2469100 0.4679300 -0.7024800 -0.0012473 0.0072217 0.0072217 -0.0368100 0.0171810 0.0000000 -0.7796500 0.1448800 0.1448800 -0.5956500 -0.0850590 -0.0850590 0.4437600 0.0210430 -0.0125290 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 8.5215094 11.6222318 6.8398185 9.2329475 4.4190871 10.7505691 1.1152996 NA 8.8312664 9.7978601 -0.2997379 7.3604292 1.7002621 9.9825831 9.2355423 5.0695003 9.3045113 9.5772953 7.9258760 10.6329738 9.6009727 7.6011334 10.8639166 4.5910391 10.6834980 9.7939045 2.7591558 NA 11.1135422 3.2027625 13.3057078 11.8591921 7.7189308 9.4338473 9.4903439 9.3344729 5.8966642 2.3632272 0.4372277 5.7002677 9.7221723 8.6001274 10.5744798 3.1152996 7.4791327 7.5119092 10.4745049 5.3149756 10.2103717 NA 10.3750477 4.7735164 4.2650543 9.4902841 5.7519296 2.1152996 8.9048381 8.6476602 4.0925880 NA 13.5780303 1.9226546 10.1335046 0.1152996 8.5623874 6.0636712 8.0636717 9.7641114 15.114625 5.638867 8.871026 12.302424 10.064402 9.461264 12.480055 12.015700 10.528668 10.680168 12.704487 10.749435 9.097585 8.537369 1.922655 7.384432 11.753288 10.5062794 7.4903439 8.4247806 9.1223316 9.9374768 9.2158484 7.0251972 9.6437584 9.5520160 7.2133366 -0.2997379 3.4728516 7.8535828 10.9664678 8.8626581 10.3335650 9.3602629 11.5191153 4.8157445 10.1648127 10.3522155 10.9137762 9.9879794 9.8432248 8.5225721 NA 8.5598742 7.1068267 3.9481990 10.6758761 6.1096573 10.2257878 11.0763923 7.7152173 13.1308937 10.1376722 9.9330875 12.0695916 9.9572618 8.9918214 1.2852246 TCGA-A2-A1FZ 63 0 NA 683 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 120.48.0 NA NA 2 4 NA NA 3 3 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.112456e-07 11.4022986 8.3652183 6.8405249 11.2148737 2.8966981 10.2673950 NA 10.3460855 12.2677581 10.9304364 10.0655189 7.6838845 9.9525925 8.4220109 8.1104870 8.6381745 10.7646726 10.2340816 7.5722728 3.8967078 10.5847636 10.1556661 14.1414678 10.1702442 9.4547029 10.9832861 5.4132827 11.6702131 NA 1.5341612 9.5023929 12.3688342 12.7972389 8.2444518 13.0839909 12.7441129 9.2464188 7.3561394 4.0121843 6.7491507 8.2966382 9.4036212 7.8062673 13.5262665 2.0487244 10.6336731 13.8349394 6.0305634 9.2951187 11.0002867 9.8022617 7.4783263 NA 13.3422443 9.2236364 4.7491481 7.3004294 NA 4.2503477 10.2513243 11.0037792 11.2296144 12.3537463 10.4933115 10.0396655 1.7267876 11.7558972 10.0760637 6.4749746 9.0441952 1.3117356 12.1854455 15.2926284 9.1237298 11.8261304 11.6168568 7.9362357 -1.2733431 4.2186339 8.8392221 9.4716163 11.4781174 NA 5.1530473 6.8248149 9.8142453 11.0963799 7.1104864 6.0755112 5.8353077 10.7938807 11.6270833 1.5341612 13.1629735 5.7154679 7.4949668 12.4833388 12.4896836 13.0777217 9.1488472 10.2630297 11.2015025 10.6122425 11.0242720 5.3706386 8.2601122 12.7814716 11.2387822 NA 10.3378073 8.8168950 -0.2731688 3.2147776 9.8891739 10.8152395 10.4990971 9.1180261 14.7894401 9.7539974 9.9239992 9.6838845 2.4272307 15.7076027 9.6284036 13.8113003 11.5093713 10.1493729 9.8182179 8.5211984 10.9821446 3.8854e-03 8.3764e-01 8.3930e-01 8.5087e-01 8.3959e-01 -9.4046e-03 -7.3339e-03 -8.0771e-03 -8.0771e-03 3.6076e-03 3.6076e-03 -1.1575e-02 4.3682e-05 4.5800e-03 1.4297e-04 2.6357e-03 2.6357e-03 -3.3243e-03 -3.3243e-03 -4.7079e-03 0.0000e+00 5.9047e-03 2.1323e-02 3.8854e-03 3.8854e-03 1.6286e-02 1.6286e-02 1.6286e-02 1.0842e-02 3.8854e-03 3.8854e-03 1.3772e-02 -4.6142e-01 -9.4046e-03 -9.4046e-03 -7.3339e-03 -7.3339e-03 8.7528e-03 -8.0771e-03 -8.0771e-03 -4.7079e-03 -4.7079e-03 3.6076e-03 -2.2168e-03 -2.2168e-03 5.8309e-03 5.8309e-03 4.5800e-03 4.5800e-03 6.9435e-03 2.6357e-03 -3.3243e-03 -3.3243e-03 1.6705e-02 -4.7079e-03 0.0000e+00 8.0567e-03 1.9503e-02 2.1323e-02 3.8854e-03 -2.7707e-03 1.6705e-02 1.6286e-02 1.0842e-02 3.5579e-03 2.5250e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2659413 14.4189621 7.8891736 10.4542776 3.0927487 10.5537282 0.7267440 1.8966981 8.3173696 10.1142613 -1.2733431 9.0588192 5.2659432 9.9953245 9.2552366 1.5341612 8.9519899 9.6918452 11.9286001 10.0716332 9.9278651 7.5276826 11.2997196 3.7711778 7.2464185 10.0396655 4.7711778 NA 10.3602319 2.5341363 12.1835220 12.0992395 8.3211073 10.1324559 8.2065626 9.0430639 4.8142479 2.0487244 0.7267440 2.1862153 9.0610558 9.2678792 11.3234382 6.3117447 9.4757300 6.1530473 10.3547724 5.7711778 9.4758139 NA 12.5483572 2.0487244 4.3992053 9.6077742 4.7467051 3.1191071 8.6736889 8.4866705 5.4816703 -0.2731688 13.0022523 0.7267440 10.6549307 -1.2733431 8.2601122 4.6336753 7.8992101 9.0644043 13.0396194 5.6692961 8.3561390 13.0839909 10.3957118 10.6674632 13.5262665 12.2311050 9.3051552 11.0613351 13.4069772 9.9459510 9.4716163 9.1923490 0.3117356 7.2266280 10.9903452 11.194643 7.296638 9.024845 8.688232 8.483339 10.130285 7.066633 8.334113 10.170244 6.434141 3.311750 5.621601 7.405629 12.043064 9.980039 7.587870 8.009871 13.634894 5.218634 11.229614 9.933797 11.507732 10.211102 10.911348 9.672226 3.896708 9.419119 7.038622 5.030561 11.096380 7.732407 10.870485 10.793881 7.423750 13.131591 10.107244 10.365671 13.130394 10.567167 9.765016 1.896698 TCGA-A2-A1G0 49 0 NA 616 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 109.61.0 NA NA 5 2 NA NA 3 3 3 3 1 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 2.781139e-08 10.81388658 9.58542191 7.65942227 11.77381658 0.71694701 11.09606968 1.85439468 10.61686905 12.71331081 12.56443514 9.90623838 8.15153617 9.73983055 9.60138379 6.99860622 8.74702312 11.37333283 9.52361860 8.11778749 1.71690312 11.34152066 9.36436647 13.22495027 11.46022765 9.47779428 10.60838790 5.77002028 10.54916501 1.97995216 1.85439468 8.80118485 12.77191916 12.64097812 7.33749435 14.20331562 13.63204039 9.39357022 7.19588005 4.48244174 6.75253185 9.01244744 9.69132251 8.10061241 12.65898253 2.30188025 10.86105635 13.60523263 4.62379664 8.89424785 11.26976914 8.22945093 4.39498051 NA 13.11658428 11.55882606 4.03884000 8.28676335 -0.02004784 5.76130123 10.21076338 10.67835762 8.60321425 13.36153036 10.30412289 9.48310554 1.71690312 11.33253760 10.55422046 6.66176670 8.15985166 7.34042340 11.81520327 14.26134116 8.94732221 11.47179545 12.01920415 7.34334741 1.20232368 2.56491466 8.78514869 9.52297417 12.70608953 -1.60515664 5.28979759 6.88683300 10.41700078 10.98650217 7.32571740 6.90673309 4.88683300 10.47546432 12.11501028 -0.60493720 13.88482781 6.23418322 8.04423618 13.88633192 11.09845088 13.15834785 7.53197090 10.21156359 11.05698053 10.77381654 12.07929017 5.64290658 8.11607879 11.81638727 12.28970291 -1.60515664 10.29282534 9.98743684 0.71694701 3.75604120 9.45229479 10.21276301 10.59096713 9.41873410 15.09533828 10.70984624 10.76157525 8.64172050 3.64290947 15.53194093 8.79051402 13.33377837 12.07621826 10.25529088 9.36004268 8.56365199 10.27575717 0.4768400 0.4768400 0.4584500 -0.0204120 -0.0204120 0.4424000 0.4653600 -0.0216470 -0.0216470 0.9569600 0.9569600 0.9314200 -0.0041546 -0.0117300 -0.0203090 -0.0143660 -0.0143660 -0.0129890 -0.0129890 -0.0260300 -0.0076101 0.0091705 -0.4940200 0.5077600 0.5077600 0.4429100 0.5129800 0.5129800 0.4959700 0.4768400 0.4768400 0.0000000 -0.0204120 0.4424000 0.4424000 0.4601500 0.4601500 -0.0216470 -0.0216470 -0.0283770 0.4629700 -0.5144500 0.9569600 -0.0099490 -0.0099490 -0.0099490 0.0116150 -0.0117300 -0.0033243 -0.0203090 -0.0143660 -0.0129890 -0.0129890 -0.0129890 -0.0260300 -0.0076101 0.0091705 -0.5487100 -0.4940200 0.5077600 -0.0036011 -0.4682300 0.5129800 0.4959700 -0.0077482 0.4069400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 9.37440507 12.31263162 7.10233899 9.78192012 4.00968756 10.67806821 3.60443907 1.39495308 8.47845901 8.55862964 -0.60493720 8.24292970 2.39498051 9.73092843 9.68326923 1.71690312 9.53644850 9.96150960 12.27924577 11.94992838 10.40060090 8.92538620 10.52747955 4.56490247 8.71465182 9.48310554 4.06740639 NA 10.21276301 3.85441463 12.19587974 11.98299169 7.58727272 10.48707629 8.39497966 9.49629896 4.14986903 0.71694701 -0.02004784 6.49301160 9.16894333 8.66176634 9.52747955 5.74370884 7.84917613 4.52426431 9.55674150 6.00968980 9.88131207 NA 11.11693346 3.56490247 4.17633873 10.02382628 6.10206388 7.07446048 8.72925297 8.50872219 8.42840289 -0.60493720 13.55866883 0.71694701 10.01428275 -0.02004784 8.27149664 6.40620671 7.61414811 7.57737444 13.668302 3.918539 9.829087 14.203316 10.452633 9.978063 12.658983 12.952743 9.465101 11.149450 13.729288 11.604129 9.522974 8.584804 1.202324 7.947649 11.710978 10.818884 7.725897 9.059427 8.653546 8.735942 10.186570 7.337494 6.498268 11.460228 5.053190 4.325717 5.584803 6.036888 11.649566 10.320534 10.285624 8.126299 14.882773 8.004159 8.603214 10.122475 12.678068 9.927823 10.852104 9.242037 NA 8.682946 7.352082 8.513921 10.986502 7.009690 10.877989 10.475464 7.623799 13.964682 10.441081 10.349903 13.338365 9.275329 10.099748 2.787307 TCGA-A2-A1G1 85 0 NA 584 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4.727937e-07 2.224912e-07 12.4491984 3.6605180 6.2662375 9.9142089 -0.8630212 10.3430522 1.8373782 10.2287195 11.0924219 9.5922808 10.2684890 7.3341705 8.2597814 9.4745756 7.7237933 9.2428621 9.0962310 10.9307601 9.3081303 6.8443128 9.5866182 10.3049989 14.4258737 10.3822092 10.3693745 10.4770819 6.6487056 10.7051472 -0.8630212 2.7219194 9.6227829 12.5062783 12.6380444 7.6025200 17.4109290 12.1405594 8.7256682 7.2217621 4.0195952 5.2349841 8.3561222 6.4407346 7.7951650 6.0498420 -0.8630212 13.7886220 9.7129654 5.4130795 9.8494806 10.8565563 6.4678712 6.2084158 0.1369788 14.7372742 8.3267782 2.3848787 9.0034597 1.9442962 6.2244166 9.9289305 12.7253169 10.0907862 10.2134353 10.5577034 10.7735782 -0.8630212 11.4863731 10.8554865 3.2662318 8.1989999 3.1369460 8.1662409 15.7260195 8.3945536 11.6360521 11.4910652 11.8158838 0.1369788 NA 8.2402413 9.8729326 11.1406472 NA 5.9313687 7.5778231 10.3576343 11.1816892 5.9761574 7.5271227 7.3801277 10.5754855 12.1051704 0.7219413 13.9301251 2.9443150 7.6348052 12.0495623 12.1341331 12.9159547 6.7143829 10.2857479 11.0689838 10.5095984 11.2087511 5.4856812 8.2584869 12.1332505 7.3872522 -0.2780587 10.5681900 10.1714086 0.7219413 2.4624712 10.1174503 9.0050044 10.9428990 10.6278044 15.3624153 10.2107605 10.4647869 7.0347990 3.2662318 12.4662594 4.5632192 13.3731921 11.9274039 10.0613950 8.6035399 8.4430152 8.8904546 0.0975420 0.0975420 0.4069400 -0.2265000 0.1290400 -0.2321400 0.1536700 0.0790150 0.5001200 0.4951000 0.4951000 3.0662000 0.3952900 -0.2690100 0.1300700 0.1300700 0.1300700 2.0626000 0.0051359 0.1104400 -0.2246500 -0.2366700 -0.2454500 3.6569000 -0.2446000 0.2288500 3.6569000 -0.2611900 0.2367400 -0.2466700 0.0975420 -0.2188500 -0.2265000 -0.2368000 -0.2301500 -0.2332500 -0.2332500 0.0790150 0.5001200 0.5001200 -0.2331200 -0.2182400 0.4302400 -0.2331200 -0.2331200 -0.2362300 -0.2362300 -0.2690100 -0.2690100 0.1300700 0.1300700 1.9938000 0.0051359 0.0051359 0.1283000 -0.2358200 -0.2409500 -0.0193140 -0.2454500 -0.2498200 -0.2354500 0.4111100 -0.2611900 0.2200600 -0.3745900 0.1439900 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.240 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.500 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.240 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.500 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 8.8708163 12.7470557 4.8093784 8.4130778 3.8648696 12.0629715 1.8373782 5.3366262 7.5484644 8.0911497 1.9442962 8.4725227 1.7218976 10.3121913 9.4577541 0.4589069 8.6614952 10.4815269 7.4361618 7.1027379 9.3874119 7.4723440 10.8212639 3.2244108 9.2237534 10.7735782 2.0438344 1.3069038 8.9972647 4.3068819 13.1727407 12.3699740 8.1551537 10.9340071 9.5757455 9.1586276 3.1813411 3.1813411 0.7219413 NA 7.2376163 7.4945052 7.8129108 2.9949417 8.0389519 4.7951643 9.9999783 5.2030445 9.1745005 2.9949417 13.1975651 3.8093836 5.4768029 9.8305669 7.7976090 7.9964882 8.8181920 8.7461324 7.4315745 10.2047241 14.1868234 -0.8630212 10.1837366 NA 11.2384369 4.8511993 8.4656284 8.2297110 12.810106 10.750513 8.174501 17.410929 10.507167 11.172955 6.049842 9.096231 9.544221 12.455779 13.261196 11.272983 9.872933 9.394341 2.306875 7.998040 10.499445 10.432149 4.751662 9.446998 8.784412 9.398461 8.880585 6.608629 5.114234 10.382209 9.639288 2.944315 9.544221 8.913724 13.062554 11.785648 8.382506 7.368175 10.412205 8.464506 10.090786 10.128475 12.868591 9.768131 10.634057 10.314996 -1.863021 9.140675 8.096955 8.345188 11.181689 8.109934 10.027598 10.575486 7.790300 14.723911 10.307505 10.815554 13.381355 11.117807 9.349450 2.837398 TCGA-A2-A1G4 71 0 NA 595 breast stage iiia t3 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 109.61.0 NA NA 2 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.781139e-07 11.6045269 6.4679886 7.0424911 10.8182225 -0.2824387 10.6946016 1.3025238 9.7782561 12.3906484 7.9827843 10.3484341 8.5345437 9.5027401 9.1198617 7.2279952 8.8286960 10.7276220 10.4909742 7.0721766 2.7175613 10.5933095 8.1632647 13.0599590 12.3380091 9.7692223 11.1880496 3.7764515 10.4635146 -0.8674890 -0.2824387 7.6833442 10.5994389 12.7916637 8.5713894 11.8504883 13.6004579 9.3420511 7.0514613 4.7175613 5.3224221 8.8182227 10.1311882 5.5419887 13.3692473 1.5920144 8.9399526 14.1228125 0.4544918 8.8444883 11.8149340 7.6502670 7.4386596 -1.8672258 12.7338102 10.0198184 0.7175613 8.5356098 NA 5.3710012 10.3441818 11.1164820 9.6654406 13.5991203 10.5254517 9.6644665 3.1325933 12.3161555 10.1452222 6.8365011 7.7564789 15.9075906 12.5678773 14.4828463 8.5862284 12.3219590 11.9691412 7.4945412 -0.8674890 5.4454817 9.1501022 9.1141650 10.8330374 -1.8672258 4.2618843 6.6717562 11.4728651 11.8335792 6.8807908 5.7100267 4.5588615 10.7603595 12.1574776 -0.8674890 13.9352403 5.7619554 7.4272181 12.3163106 9.9674638 13.1526227 7.2094134 10.2237025 11.1836367 11.0395822 11.5971435 5.6244519 8.3899853 11.5933096 13.1296007 -0.8674890 10.0353497 9.6537073 0.9399788 2.6586685 10.0289300 9.9192757 11.0614862 9.7325105 14.7634336 10.6507591 10.3718978 8.6214420 1.5920144 16.5629808 10.7140336 13.9937573 9.8575379 10.3347216 9.1605038 8.2721492 9.8599269 -0.00973160 -0.00973160 -0.01020700 -0.01805300 -0.01805300 -0.02367700 -0.01447800 -0.01530300 -0.01530300 3.65690000 3.65690000 0.69974000 0.00836090 0.00072342 0.00127370 2.10030000 -0.75278000 -0.00473650 -0.00473650 -0.02189600 0.00168990 0.01812900 0.01365800 0.01365800 0.01365800 0.01156500 0.01156500 0.01156500 0.01435600 0.02822600 -0.00973160 -0.00546150 -0.01805300 -0.02367700 -0.02367700 -0.01447800 -0.01447800 -0.01530300 -0.01530300 -0.01530300 0.68706000 0.68053000 -0.78174000 0.00321670 0.00321670 0.00321670 0.00321670 0.00000000 0.00794330 0.00127370 -0.76499000 -0.00473650 -0.00473650 -0.00473650 -0.02189600 0.00168990 0.72455000 -0.77140000 -0.75394000 0.01365800 0.00335560 0.01156500 0.01156500 0.01435600 0.00780410 0.01037400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 8.3383910 10.1855053 8.7408524 7.6756297 4.6403896 9.9383415 2.5920384 NA 8.7555646 6.5163020 -1.8672258 6.7979338 -0.2824387 10.1878802 9.1005443 0.7175613 8.0454872 9.5070939 11.1679123 8.4409368 9.8817339 8.4352364 10.3831922 3.1325933 9.9302592 9.6644665 1.7175613 NA 10.0659195 5.5163020 12.4853308 12.0921469 6.9527762 10.6465719 7.3757719 9.2266754 5.3517661 1.1325768 0.1326426 3.0868007 7.6344350 9.1070122 10.1542717 4.2200590 8.6204075 5.1986867 9.9253880 7.3590098 9.5302723 NA 7.9654876 0.9399788 7.7194374 10.0406074 7.7510385 7.3050248 9.1466181 7.7546497 8.8252132 -1.8672258 13.7149455 -0.2824387 10.3447901 NA 8.6214420 4.9270146 7.5419887 7.2848824 15.854250 6.002963 8.929448 11.850488 10.511976 10.118084 13.369247 12.605860 8.311997 11.558207 12.410611 10.581230 9.114165 8.624451 -1.867226 7.174257 12.434380 11.032332 7.307523 9.068499 8.974948 10.027415 10.330269 6.327355 7.612378 12.338009 6.235886 -0.867489 10.420310 8.722633 11.515762 9.869000 7.734368 8.402893 12.023432 6.691019 9.665441 10.252187 11.680095 9.566183 11.043240 8.797045 NA 8.508929 6.086794 7.941562 11.833579 5.380525 10.789023 10.760360 7.302523 13.813946 10.113094 9.623449 13.041084 10.896018 10.039864 1.302524 TCGA-A2-A1G6 50 0 NA 501 breast stage iiia t2 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 0 10.9698688 8.9512751 7.1675436 10.8375385 1.5859240 10.6144447 2.0009735 9.7100460 11.4068127 8.6532095 9.7558496 7.8232672 8.7435523 9.9321922 7.5427038 9.2273743 9.6532096 10.1911983 8.6827861 5.2739820 10.8646322 10.3807014 13.9618389 11.4032636 10.0612077 11.0044800 5.6448196 10.6220982 0.7379463 2.9395651 8.9962582 14.2087899 13.4814528 8.2986427 12.4620152 12.2923247 10.1574666 7.1708875 4.0884215 8.1077433 9.3592471 10.8045551 9.3047428 12.5560305 7.6851265 11.0126553 12.5497840 8.1216319 10.0112570 10.8841145 8.8702991 4.0884215 NA 13.2194673 8.6070588 3.8422648 8.2201306 1.2233608 4.2488915 10.1515556 9.8902126 10.2689191 11.0728713 10.1311037 10.5258303 2.4160020 11.4014858 9.5790202 5.6448196 7.2136613 6.9078533 11.9396841 14.4405333 8.3803693 11.4499388 11.1564129 8.0526240 1.8754262 3.5859240 8.3183747 9.0652559 12.9215011 -1.5838088 -0.5840251 6.8713274 10.5799637 11.5898329 8.9297271 6.2739802 4.5657495 10.7263284 12.2281769 1.4159749 13.3855660 5.1024986 8.0652556 12.7381390 11.5305553 12.8936947 8.0670514 9.9590314 11.2273743 11.5238885 11.1998164 4.7197803 8.2297806 12.0450146 11.4682280 NA 10.2269728 9.3467369 3.1164313 4.3231322 9.8907195 10.8879288 10.4641459 9.2128504 14.8953378 10.4212733 9.7071703 8.2863642 6.0159123 15.6439257 9.5758710 14.1355756 13.1047417 10.1507092 10.0407951 8.1625137 9.5247789 4.7190e-03 5.5459e-04 5.5459e-04 -4.1585e-04 -7.6280e-04 -2.7724e-04 -1.3858e-03 -5.6516e-05 -5.6516e-05 -1.1087e-03 -1.1087e-03 -1.1087e-03 8.2683e-04 4.7190e-03 2.6357e-03 2.6357e-03 2.6357e-03 0.0000e+00 0.0000e+00 -1.5243e-03 8.0663e-03 4.0243e-03 -8.3160e-04 -8.3160e-04 -8.3160e-04 2.4969e-03 2.4969e-03 1.5447e-02 1.9418e-03 4.7190e-03 4.7190e-03 6.9435e-03 -7.6280e-04 -2.7724e-04 -9.7017e-04 -1.3858e-03 -1.3858e-03 1.1093e-03 -5.6516e-05 -5.6516e-05 -8.4385e-03 -8.4385e-03 -1.1087e-03 2.6357e-03 2.6357e-03 2.6357e-03 2.6357e-03 4.7190e-03 4.7190e-03 2.6357e-03 2.6357e-03 0.0000e+00 0.0000e+00 0.0000e+00 -1.5243e-03 8.0663e-03 4.0243e-03 -4.3967e-03 -8.3160e-04 -8.3160e-04 4.0243e-03 2.4969e-03 2.4969e-03 1.9418e-03 4.5800e-03 -1.2024e-02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.0056507 11.9639786 6.0884257 10.3176207 2.6324544 10.5654292 1.2233608 4.6639252 8.5871763 10.0403382 2.5859240 8.8723027 3.9705868 9.7152077 9.4110601 2.5034505 9.4881322 10.2321833 9.8056310 9.6550013 9.6911173 8.2583498 10.7466364 3.3701922 10.2345818 10.5258303 6.2425473 NA 9.8651482 5.7735507 13.6560456 12.0125388 8.1841841 11.0325484 7.8190116 9.1989979 5.0159123 2.8083233 -0.5840251 0.7379463 8.0616579 7.6082925 9.7530639 5.9782414 7.4311357 5.6544040 10.5809066 5.2488915 10.1704697 0.7379463 11.9461621 2.6639366 5.5555524 9.7573738 5.0032154 6.4658488 9.2047179 7.7888645 7.7558496 NA 14.0825288 0.7379463 10.5433491 NA 8.1692165 7.8610143 8.4780456 8.8661798 11.435114 3.170886 8.719780 12.462015 10.411498 10.162514 12.556031 12.137206 9.390787 10.773277 13.025871 11.401486 9.065256 7.899815 -1.583809 8.345258 11.550105 11.069516 6.600875 9.368741 9.274758 7.603352 10.234658 6.164193 7.652014 11.403264 5.438366 2.939565 6.654404 5.094633 11.957580 10.693287 8.954188 7.827510 10.800244 7.421624 10.268919 10.738491 11.764451 10.374915 10.586864 8.689795 NA 9.504013 8.203315 7.751390 11.589833 6.081335 10.836694 10.726328 6.644818 14.756910 10.398993 11.062333 12.753831 10.191610 9.878502 3.000955 TCGA-A2-A259 70 0 NA 1596 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 147.48.0 NA NA 2 4 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 5.562279e-08 11.1225799 8.3024890 7.8348610 11.1530500 0.3152184 11.2932204 NA 10.2266170 11.8414797 11.4414455 9.8650097 7.1031273 8.8259891 9.3145205 6.7746566 8.4066604 9.9169958 9.7863922 7.7684953 5.1607145 10.4991705 9.1978681 13.4399522 11.2151483 8.8954835 10.3840033 5.7664361 10.3049672 0.3152184 0.6371929 8.8210367 13.1718937 12.7465920 6.4393455 11.8104555 12.4082298 9.8597065 6.3541436 4.1225816 7.3623489 9.0974043 7.9464022 8.2085265 12.2873971 4.0965823 9.8115796 13.3777772 5.2810083 8.7973875 11.1300077 7.0225842 7.2251178 NA 13.1440830 9.8613622 1.7746711 9.2518630 0.9001809 4.8850813 10.1249931 9.9622336 10.0887763 12.6273280 10.0717813 10.2153370 2.3152184 11.6814106 10.2503901 7.0566919 7.4263604 8.0949444 11.7083473 15.1279413 8.1612795 11.3703380 11.6262637 9.1747597 2.4026949 0.9001809 7.8524434 9.7346585 11.6420758 0.6371929 3.2694222 7.2953649 10.0863017 10.8409905 5.8543847 7.1544293 4.7075414 10.1685346 11.6451615 1.1226065 13.1939944 4.3152257 7.7684953 12.5572082 11.4359489 12.9672297 7.1669745 10.0260315 10.8108303 10.6242551 11.9222085 5.4851499 7.8348610 11.5631526 12.9936601 1.4851692 10.5428409 10.3933759 0.9001809 3.3622454 9.9142080 11.9679580 10.7240854 9.3201477 15.0613538 10.3309885 11.5122881 8.4276644 4.4445081 16.0696493 7.1825036 12.8253710 12.5432921 9.0965847 8.9527555 8.8328944 9.5123863 0.00694350 0.00694350 0.02763800 -0.00968060 -0.00968060 -0.01780300 0.00033849 0.00000000 0.00000000 -0.41135000 -0.41135000 1.70920000 -0.00830050 -0.00968060 -0.00207840 0.00027728 0.00027728 -0.16494000 0.00471900 -0.01216200 0.00388540 0.01558700 -0.26817000 -0.29508000 0.38700000 0.02496900 0.02496900 0.02496900 0.00777830 0.00694350 0.00694350 -0.00176440 -0.00968060 -0.01780300 -0.01780300 0.00033849 0.00033849 0.00000000 0.00000000 0.00000000 -0.00609040 -0.00609040 -0.41135000 -0.01310000 -0.01310000 -0.01310000 -0.00097017 -0.00968060 -0.00968060 -0.00207840 0.00027728 -0.16494000 0.00471900 0.00471900 -0.01216200 0.00388540 0.01558700 -0.42909000 -0.32170000 -0.29508000 0.00750000 0.02496900 0.02496900 0.00777830 0.00805670 0.01516800 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.706 0.000 0.000 0.000 8.85728964 12.02656933 8.43286798 9.72832394 5.42374959 10.13540392 4.80707666 0.63719289 8.21760007 8.07178144 -0.09974179 7.81905054 3.56315813 10.53409089 9.66561182 1.48516918 9.97700309 9.21004275 10.85486854 9.17941127 9.39760020 8.08506290 11.08071835 4.04314324 10.18366180 10.21533703 7.87364589 NA 10.54404367 4.17320740 13.37042271 12.08402964 8.58084005 10.46274795 8.47383480 9.42113344 3.74148856 2.01567597 0.90018091 -0.68478159 8.92163032 8.61214125 10.01999332 6.30957821 7.34136137 6.47509624 10.99558451 7.21307019 8.99206368 1.12260646 10.72885297 4.07011450 5.05669190 9.89054686 5.57919825 5.76643615 9.85244337 8.35002379 6.24003760 -0.68478159 13.64218109 -0.68478159 10.21835375 -1.68454970 9.50566708 5.45477799 7.99294457 8.81407419 13.368793 4.869812 8.697849 11.810455 10.173595 10.156789 12.287397 13.429130 9.100882 10.996024 13.102668 12.085166 9.734658 8.070112 1.122606 8.765405 11.933152 11.260486 7.692436 9.311699 9.544645 7.109641 10.299850 7.116125 7.423750 11.215148 5.741489 5.281008 6.332033 6.004176 11.930165 10.216469 9.808990 8.631507 12.758816 7.070112 10.088776 10.569073 12.597517 10.475096 10.710759 9.375245 NA 8.985447 8.522142 7.312405 10.840990 6.846606 11.015881 10.168535 7.869814 13.962569 10.528025 10.259937 12.909783 9.981005 9.806577 1.315218 TCGA-A2-A25A 44 0 NA 3276 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 147.48.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.1971e-06 4.449823e-07 10.8297012 8.8586680 6.9968113 10.8627089 4.4571740 10.8038006 0.1791288 10.0920772 11.7962880 8.6196419 9.6262712 8.1495815 8.6766405 9.5083116 7.1541761 9.4323262 9.9923277 10.2230355 8.6492368 4.2495743 10.6972509 10.3395637 11.4137659 11.3454765 9.7585039 10.7229931 6.3125871 10.7091982 1.3166671 4.0271806 9.5132377 13.6261420 12.9955716 7.9125421 11.5502022 12.6579575 10.2832625 5.8851668 3.1426585 7.4938843 9.3571057 10.1687244 8.0836719 12.0450758 3.2148087 11.2142619 13.2640627 7.2059877 9.3372169 10.3939927 5.8906826 7.5524877 0.4422269 13.1963913 12.2441879 2.5577042 7.8041659 0.8572644 6.3729591 10.1675886 10.5212626 9.7554833 11.9717342 9.7607652 9.9739286 1.9447085 11.4969397 10.3233363 6.1333847 8.0296875 4.0470846 10.1904152 14.6941978 8.1631278 11.1899957 10.9579221 8.9043838 1.8572644 4.3650556 8.4811415 9.5358599 12.5612715 -1.1427356 1.6646194 7.2602722 10.5524881 11.6905453 7.4327991 6.6020931 4.7641497 10.8214202 12.0493985 -0.5578792 13.7051980 5.6121460 8.3660450 13.0455782 11.5026931 13.0246388 7.7291653 10.1219956 11.1465583 10.9714707 11.5572660 5.0764266 8.3551119 12.0116033 11.4135264 0.1791288 10.4254534 9.3105305 2.0271894 4.3003727 9.8740681 10.7680899 10.3408237 8.9736038 15.0991592 9.9155899 9.7066649 8.6237886 3.7641550 14.4035665 10.0199658 13.9053209 13.0006032 9.9852542 9.7535922 8.5620279 10.0240537 0.05346500 0.05346500 0.34730000 0.00000000 0.00000000 -0.00532640 -0.00622860 0.00847430 -0.34044000 -0.00332430 -0.00332430 -0.00332430 0.00604400 0.00604400 0.00485790 0.37693000 -0.00070529 -0.00439500 -0.00439500 -0.00470790 0.00180300 0.00402430 -0.29154000 -0.29154000 -0.29154000 0.02239100 0.02239100 0.02426800 0.00138680 0.05346500 0.05346500 -0.00871460 0.00000000 0.00861350 -0.00816280 -0.00622860 -0.00622860 0.00847430 -0.34044000 -0.35175000 0.03312700 -0.00136390 -0.00332430 0.00680440 0.00680440 0.00680440 0.00680440 0.00604400 0.00294980 0.00485790 0.00263570 -0.00439500 0.00235810 0.00235810 -0.00470790 0.00180300 0.00402430 -0.34200000 -0.29154000 -0.29154000 -0.02712400 0.04684200 0.02239100 0.00138680 0.01976300 -0.33629000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6443461 12.8156766 8.3218055 10.3879100 4.8086631 10.3815567 2.4422269 3.9447273 8.6500501 9.0740058 0.4422269 9.2939661 3.6121519 9.9964914 9.5890031 1.5576797 10.3795962 10.0495526 10.2021105 9.1246319 9.4656164 7.9513378 11.8635859 3.2148087 8.9820273 9.9739286 5.8516141 -1.1427356 10.3355239 4.7520795 13.2794560 12.1468465 9.4553124 10.2439307 9.3832699 8.9858986 4.6516774 1.1791925 1.1791925 7.4847939 8.2527941 8.7835559 9.8302396 7.0271850 7.4947900 6.4608867 9.9064277 6.1791886 9.6929155 -0.1427356 11.6098495 3.4719678 5.6386184 9.6506680 6.0128368 5.4866178 10.1461259 9.1322203 7.4403426 -2.1430541 13.9233280 2.3166961 10.2618693 -1.1427356 8.0992431 7.3451000 7.9605476 8.7330092 12.7805367 5.1426626 8.3491131 11.5502022 10.3795962 10.2843108 12.0450758 12.5780385 9.2304893 10.9546336 13.6754425 11.3092436 9.5358599 8.8677881 -0.1427356 7.4327991 11.3679004 11.297091 6.764151 9.504718 9.096262 7.585180 10.426408 6.957923 8.482969 11.345477 6.438461 4.027181 6.907108 6.829321 11.655124 10.516141 8.345964 8.473809 12.209579 6.658160 9.755483 10.673844 11.110664 10.765089 10.578573 9.456243 NA 9.338842 8.263135 7.170142 11.690545 7.916604 11.145985 10.821420 7.316692 14.469092 10.259739 10.740476 12.525757 10.611939 9.817624 2.442227 TCGA-A2-A25B 39 0 NA 496 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 black or african american not hispanic or latino 142.49.0 NA NA 4 2 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.640872e-06 4.171709e-07 11.71676126 1.92219785 7.27654691 10.85481510 NA 10.88929291 -1.53742411 10.41477919 11.97649367 11.16320579 10.20591748 8.20254653 8.73539592 9.24821863 7.28294477 8.45003009 10.00628133 10.94834387 7.31451527 3.32074460 10.43395029 9.24576422 14.55904884 10.87956357 9.12899007 11.34750898 5.25718038 11.42113571 0.04767798 -1.53742411 8.87109575 12.73108875 13.68374892 7.66243838 11.51074197 14.01951159 7.02118654 6.65752282 4.76654746 5.16320485 8.57910999 9.42204353 7.41696216 13.28319437 2.16320888 10.15929894 13.91052734 -1.53742411 8.86790758 11.20043594 5.17701284 9.71956440 3.10661633 12.48224299 8.26042750 0.46278526 7.39940440 0.46278526 4.87215896 10.57910999 10.80955681 9.79312271 11.24433071 10.07148288 9.14136611 0.04767798 12.24125393 9.62389795 5.71069349 8.08847502 2.16320888 11.13762039 14.20325836 8.08245405 11.43825584 11.29822436 9.00289404 1.04774776 3.92219785 6.66243909 10.62610124 10.71838483 0.78467148 6.56079748 6.58170675 9.68253959 11.68586277 5.52885570 7.15625300 5.04773032 10.76626146 12.20507551 1.63268700 13.98929587 5.93037070 7.06639277 12.20644345 11.55651372 13.26442391 6.83780578 10.21053949 11.10007016 10.38675082 11.30727567 5.40528104 9.32074708 12.71772084 11.26002230 NA 10.11740207 9.82908829 NA 2.55107299 9.63893923 10.83699048 10.63018420 9.24494532 14.80355502 11.53623823 10.56211389 9.19493361 5.01735630 14.59106253 8.27173007 12.44549231 11.23878776 9.56932893 8.93545680 8.67343735 9.77659572 0.4158300 0.8776700 1.8291000 -0.0645080 0.6753000 -0.4106800 1.2290000 0.5301100 -0.5474400 -0.3319100 -0.3240300 1.1910000 0.4809600 -0.1080200 -0.0865180 -0.1729700 -0.1729700 -0.4693500 0.5283600 -0.1706900 3.5906000 3.6569000 0.3445300 -0.5037000 3.6569000 -0.0358570 -0.0358570 -0.0358570 0.3810500 -0.1888600 -0.0280810 0.0879690 -0.0645080 0.0000000 0.1452700 0.0790350 -0.0861200 0.5122800 -0.5474400 -0.6008000 0.2466900 0.7081900 -0.0041546 -0.4947500 -0.4947500 0.3649300 0.3649300 -0.1080200 -0.4840700 -0.4389700 -0.5342900 -0.4693500 0.5283600 0.2500500 -0.0631660 -0.1143000 -1.1841000 0.0751280 -0.5585700 -0.5037000 -0.5488500 -0.0358570 -0.0358570 0.0668020 -0.1628100 -0.5720900 0.373 -0.108 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.416 0.416 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 -0.324 0.464 -0.130 0.365 0.326 0.373 -0.108 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.416 0.416 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 -0.324 0.464 -0.130 0.365 0.326 8.26204785 12.35767854 6.23755225 8.63644337 3.98632901 10.97920481 0.04767798 NA 8.89007880 5.92219785 NA 8.58005840 0.04767798 11.33755534 8.83454279 0.04767798 7.49618909 10.51431492 8.92526839 10.03024682 10.02782059 8.57780985 10.29010872 2.55023579 8.86044081 9.14136611 0.46278526 -1.53742411 10.86897106 3.74817138 12.16331415 12.11706643 7.00966069 10.11022450 9.08847502 9.46065125 4.61251174 0.04767798 0.46278526 4.61251174 7.16666926 6.86790758 11.19980213 0.78467148 6.80252670 4.48513697 9.87480665 5.13519008 10.76340460 NA 10.08710464 3.21764950 4.90571191 10.44608746 7.52564843 5.70117198 8.98828675 8.39350329 6.53958225 NA 14.14493771 -0.53721474 10.54091690 NA 9.66305174 4.07747374 7.87850772 7.01351251 13.029257 5.217653 8.400876 11.510742 9.949601 10.625472 13.283194 17.107055 9.151016 10.765691 13.628419 10.576183 10.626101 9.768828 2.632687 10.141806 11.831273 11.082298 7.457120 8.911915 9.295656 8.108425 11.408193 6.237552 8.568674 10.879564 5.244126 NA 4.691584 8.770741 11.259211 10.665502 6.677085 8.448608 11.914750 5.880619 9.793123 10.348081 10.202125 10.319970 11.207600 9.317634 NA 8.137770 8.571290 6.270121 11.685863 9.194934 10.986818 10.766261 7.473993 13.547990 10.506135 9.944566 12.142796 10.437181 10.045849 1.632687 TCGA-A2-A25C 50 0 NA 523 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 142.49.0 NA NA 2 2 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.112456e-07 11.1662832 8.0090403 7.1069282 11.5374274 0.6265793 10.4845515 -1.1808223 10.4934079 11.5546659 9.3752426 9.4693697 8.0683290 9.2873305 9.4911989 7.1207117 10.3143211 9.3299797 10.4825514 7.4467492 2.7261119 9.4863272 9.0653623 14.5139952 10.4039433 9.2115331 11.4603642 5.5196551 11.2704125 -0.5957508 -0.1808223 8.7755918 12.5992940 12.4542535 7.2200948 12.8936080 13.5627089 8.8960311 5.5940021 3.1767696 5.5539257 8.7521685 11.5881236 7.7306074 13.3280627 2.4630731 10.2551463 13.0960307 6.9277400 9.4151863 10.9093280 8.1445211 10.0408027 0.8191777 15.0235218 10.4444678 3.4339209 7.0600074 NA 4.9891390 10.8795738 10.2365407 10.8057688 11.5439426 8.9172476 9.1506924 0.1411712 11.5345342 9.9641924 6.3966442 9.0653623 0.6265793 10.1977814 13.8361544 8.7684804 11.9586071 12.0066450 7.7306074 2.5741015 4.8636114 8.8255417 9.3359006 11.4410385 -1.1808223 6.3110689 6.8636102 10.0827783 11.7388239 7.7170608 6.3110689 5.1411426 11.5182458 12.0432173 4.9484981 13.6634555 6.5640489 7.7261064 12.8825264 12.2799914 13.5158300 7.5707597 10.4462935 10.5368921 10.3968380 10.8408896 5.4116737 8.2275452 11.8692343 9.4814388 -2.1804953 9.7181948 9.5330316 2.1411385 3.9730234 9.4671238 11.4782081 10.6239517 9.6650976 14.7223678 9.8318402 10.2029199 8.6607800 2.1411385 15.3268167 8.0766035 12.1906520 10.7056743 10.1773174 9.0712897 9.0121247 10.5796009 -0.60613000 0.57202000 0.57202000 0.02314500 0.00694350 -0.59063000 0.01023600 0.54947000 -0.59439000 0.00875280 0.00875280 0.00875280 0.00402430 0.00402430 -0.00180140 -0.00180140 0.01363200 -0.61124000 -0.00470790 0.02890300 0.57113000 0.49217000 -0.03435900 -0.03435900 -0.03435900 -0.06450800 -0.06450800 -0.06450800 -0.02304800 -0.65724000 -0.60613000 0.00805670 0.02314500 -0.59063000 -0.57970000 0.02172200 0.02118300 0.54947000 -0.59439000 -0.64010000 0.00930980 -0.65305000 0.00875280 0.00000000 0.00000000 0.00000000 0.00000000 0.00402430 0.00402430 -0.00275140 -0.61383000 -0.61124000 -0.00470790 -0.00757310 -0.00581400 0.57113000 0.49217000 -0.00541840 -0.03860600 -0.03435900 -0.64354000 -0.06450800 -0.06450800 -0.02808100 -0.00027724 -0.66661000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2131424 12.9740337 4.8526381 9.8100287 3.8415807 10.3617639 2.5196677 -0.5957508 8.2693960 7.5874002 NA 8.1764709 1.7260901 10.5168348 9.1590655 3.9066790 9.0818977 9.5931790 10.1648980 10.0492361 9.1811319 8.9388054 10.4576515 3.1411385 8.7163047 9.1506924 2.5741015 1.7260901 10.3284958 0.9891390 11.6041571 11.4094518 8.1579522 10.5373203 10.3065532 8.8704245 3.9484981 1.2786390 -0.1808223 2.5741015 7.6313932 8.3020238 10.4517565 4.4485706 7.3052464 6.5437294 10.1718108 5.3890711 9.6987989 NA 10.4827737 3.6265676 4.0860024 9.7848449 5.2102447 5.8526381 9.6857219 8.4079301 6.8471213 -1.1808223 13.3281245 1.7260901 10.7397545 NA 8.2837611 5.4265466 7.9651476 8.3871717 12.7636806 6.5092129 7.9394535 12.8936080 10.6810876 11.0656593 13.3280627 12.9690024 9.4903144 10.7598614 13.0591870 9.9504295 9.3359006 9.9198780 -0.5957508 7.4246954 12.2590465 11.148451 6.400417 8.536035 9.367556 9.906347 10.765360 7.189903 9.991643 10.403943 4.491641 3.404181 7.864975 8.192244 10.677002 10.861046 8.512616 8.301015 13.150692 6.480994 10.805769 10.609157 10.810915 9.587814 10.822382 9.225952 NA 9.094176 6.946282 6.943336 11.738824 8.136628 10.069218 11.518246 7.165729 12.582791 9.793989 9.703768 12.624657 9.733227 9.772685 1.819219 TCGA-A2-A25D 90 0 NA 552 breast stage iiic t2 n3a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 22 white not hispanic or latino 147.48.0 NA NA 5 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075399e-06 4.162835e-07 11.2822080 6.6569811 7.5786769 11.2975676 0.9290335 9.5540393 -1.3928946 9.0459248 11.4655027 11.8714290 9.5700291 7.6785952 8.3144922 10.3678531 5.3620209 9.3452254 10.2116864 9.2617691 7.4368556 5.4526218 10.4467306 10.8606851 7.7795605 11.0226108 9.2079753 10.2328419 7.3418426 10.2460214 -1.3928946 1.1920679 8.5304606 10.3769709 13.2653446 6.7104207 13.2295281 13.0036041 8.5200222 7.2653450 4.3884927 7.3452251 8.7808101 11.0818530 5.7156573 11.5443229 1.9290714 11.3373909 12.8743587 2.9994589 9.0818530 10.2360343 6.9245453 7.5729177 2.1920995 14.7145891 10.0726995 0.6071054 8.4080329 NA 3.9994499 9.4604426 9.5467124 8.9414063 10.3782099 9.7299611 9.9657843 4.4897741 10.4732529 10.0438447 5.1462927 8.2346670 0.1920679 10.3376032 14.6588943 6.0380037 10.5718349 10.1365636 9.2945089 1.7770725 0.6071054 8.7273708 8.7351275 10.2559401 -1.3928946 3.2509919 6.7969572 10.2523411 10.5714739 3.7364209 6.8550603 5.0500750 9.7969577 12.0828665 3.0665714 13.7190838 4.5140212 7.4651141 10.9840724 12.0891847 12.6223739 8.2346670 10.8709891 10.1024885 9.4937900 10.2005242 3.6945905 8.9492078 11.8191734 12.5544047 2.5140212 9.9536468 8.9919169 1.9290714 2.5255177 9.5422981 10.1741385 9.4604426 8.6691792 14.9065915 10.7035188 9.8580236 7.9425233 3.7770620 15.7896438 8.4305002 12.6199322 11.9983767 9.7826826 9.0048078 7.0909487 9.3079542 2.2193e-03 -1.2851e-02 1.3882e+00 -3.7082e-02 4.7358e-01 -1.1198e-02 -5.4017e-01 5.5514e-01 -1.9399e-03 1.0074e+00 5.1368e-01 1.3762e+00 2.9133e-03 7.9175e-03 2.2193e-03 -9.2666e-03 -3.8615e-05 -2.1098e-02 -2.1098e-02 -5.1695e-01 4.1034e-02 4.3021e-03 -5.2930e-01 -2.8052e-03 5.2118e-01 3.3299e-03 3.3299e-03 5.1368e-01 1.3772e-02 -5.5226e-01 2.2193e-03 -7.3339e-03 -4.1609e-02 -4.9289e-02 -8.8526e-03 -9.9565e-03 -4.2929e-03 5.5514e-01 -5.2379e-01 -5.4189e-01 1.2795e-02 -4.9844e-03 -5.3896e-01 5.2923e-01 5.1089e-01 9.4491e-03 4.6133e-02 7.9175e-03 2.1463e-02 2.2193e-03 1.5255e-03 -2.1098e-02 -2.1098e-02 -2.4524e-02 2.5812e-02 -8.0244e-03 4.3021e-03 -5.5936e-01 -5.2930e-01 -3.3677e-02 -4.5088e-01 -5.2981e-01 3.3299e-03 1.3863e-04 1.6146e-02 1.9783e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 0.521 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.556 0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 0.521 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.556 0.501 0.000 0.000 9.5613294 11.7493997 6.5786761 8.9832584 3.7746500 10.6600407 4.7156573 0.6071054 8.8371536 10.5872726 NA 7.6866182 2.1920995 10.4724797 9.4305002 2.1920995 8.4031727 8.8419505 9.0428033 11.9140492 9.8477336 7.3982956 11.6364203 2.6937434 6.9200157 9.9657843 4.5613322 NA 10.9188814 1.9290714 14.1076638 11.9667454 8.3636893 9.6329647 11.6066047 10.1084727 4.2218462 2.6071291 -0.3928946 3.1307003 8.7695245 9.1238180 10.3393005 5.8359519 8.5910956 7.2901276 10.3490213 4.5844154 10.1390018 -1.3928946 9.8668763 2.6071291 4.2795604 9.5476230 6.0508216 6.0665650 9.7221767 8.9908375 7.5259960 -0.3928946 14.3437993 2.9290524 10.4144880 NA 7.9245459 6.0249867 7.3041003 8.8055782 11.3733245 4.8739214 9.1385145 13.2295281 9.7901481 11.7640062 11.5443229 11.6241154 9.3396567 10.4581012 12.8974400 12.8984477 8.7351275 7.7920087 0.6071054 7.4867160 10.8867437 10.9450337 6.2144629 8.7770580 9.2107595 7.9290613 9.9854821 7.9063411 6.6998903 11.0226108 5.7466836 0.1920679 3.8165895 7.8944528 11.0979840 10.6902799 8.4092615 9.1297147 10.3847994 7.5019510 8.9414063 10.7935569 10.5140237 9.5064901 10.3324994 8.4958762 NA 9.3133787 7.8372495 7.5642349 10.5714739 3.5613261 11.1250485 9.7969577 7.2689115 14.9791139 10.1793596 10.8954224 12.5523940 10.1394891 9.3561645 2.1920995 TCGA-A2-A25E 34 0 NA 2796 breast stage iiia t2 n2a m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 6 black or african american not hispanic or latino 142.49.0 NA NA 1 2 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.283541e-06 2.775223e-07 12.12386517 7.38354101 6.93830344 11.36112303 -1.66886808 10.05506073 1.50090401 9.96260498 11.61391683 6.92716283 10.50277553 7.22579066 8.81780838 8.86430286 6.25578584 9.54346959 9.96986163 10.50058508 7.03487708 3.23786960 10.99408651 9.17253752 14.86489606 10.30035977 9.20825729 10.75828610 4.39706363 10.76767954 -0.66909746 -0.08405849 7.72114226 11.66426838 12.93870810 9.26318797 12.81900162 13.02108036 7.43163549 6.21971645 3.94568261 7.10905021 8.38896485 8.74882582 6.80670685 13.01605050 1.08583252 9.10493652 13.06969886 3.88556460 9.85060942 10.95165124 7.99630908 8.78732765 NA 13.01255865 10.27641710 1.13835577 8.36577214 -0.66909746 3.46025765 9.91264463 10.71710514 10.17959614 10.10534847 9.32956361 9.45767780 -0.66909746 11.16998017 9.75303803 5.49084606 6.66189066 2.13832300 11.02967788 13.84392970 7.92513010 11.77508224 11.27073607 6.86624902 -1.66886808 5.97482984 7.72757811 8.99897171 10.08502557 NA 5.74882615 7.14154519 10.17175113 11.49682238 6.54529195 5.87786692 4.55979158 9.71197527 11.94660287 3.65289945 13.13439807 5.49084606 7.98381847 11.78385792 11.34569115 12.99847290 8.10905021 10.39065565 11.72248536 11.59424244 10.81403324 4.59775760 9.01659800 11.69401284 10.19554630 -1.66886808 10.07874658 9.61983940 0.33101724 3.08639315 9.69127173 10.46828466 10.28880080 10.39133146 15.32184170 10.47276109 10.58895032 8.98739818 2.72329643 15.73692904 9.63703490 12.08492117 11.21361630 10.13065962 9.00251435 7.86040356 9.70710940 0.0056919 -0.0040162 0.6021400 0.6289700 0.0150280 0.0221640 0.0234260 0.0037465 -0.6458400 -0.0056757 -0.0056757 1.1674000 -0.0099565 1.0538000 -0.0038779 -0.0038779 -0.0038779 -0.0001422 1.9556000 -0.6703900 0.0580810 -0.6329200 -0.0556340 0.6131700 0.6131700 -0.0607480 -0.0607480 -0.0607480 1.1351000 -0.0297210 0.0056919 -0.0117490 -0.6156600 0.5447100 -0.0345840 -0.6149900 0.0169850 -0.3565800 -0.6458400 -0.6674400 0.0195030 0.0031910 -0.6673500 -0.6308200 -0.6277900 -0.0175290 -0.0175290 1.0538000 -0.0128510 -0.6653100 -0.6488100 -0.0001422 0.5508900 0.5508900 -0.6516500 -0.6594700 -0.0215100 -0.7102400 -0.0556340 0.6131700 1.4976000 -0.6393500 -0.0607480 0.0055529 -0.0157410 -0.0502350 0.000 0.000 -0.649 -0.649 0.000 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 0.000 0.000 -0.649 -0.649 0.000 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 8.09418539 12.08627813 8.60593355 9.79755956 4.11233316 10.62099211 1.91594151 NA 8.62444493 7.30251647 NA 7.41045814 1.13835577 11.49964536 9.31894766 1.50090401 8.15274724 9.65852588 8.01045314 10.04693518 10.67705195 7.66412867 10.13187316 0.91594151 7.48579148 9.45767780 4.05889657 -1.66886808 10.17607115 3.23786960 11.85600456 12.65620840 8.09086137 10.40377579 8.54893093 9.55376809 3.23786960 -0.08405849 0.33101724 4.23786195 8.42505095 7.61406122 10.22541208 2.65289945 8.53523882 7.53554445 9.85306435 7.93645303 10.37570891 -0.66909746 10.02967788 3.23786960 4.52079937 9.65325640 6.29444798 4.43949681 8.34080169 7.70383853 10.47467534 NA 13.77750733 -1.66886808 10.60476883 -1.66886808 8.37809714 4.57890249 8.36714694 8.68412022 13.064465 6.231839 9.270553 12.819002 10.369206 10.739568 13.016050 11.642580 9.128635 10.578011 12.872009 11.692506 8.998972 8.600100 3.085867 7.714678 11.359915 10.672492 7.444715 8.994531 9.566389 9.923897 9.775445 5.449915 7.834799 10.300360 5.953025 -1.668868 5.757239 7.669710 10.061868 10.119284 9.213616 7.407789 11.080633 5.661889 10.179596 10.897979 10.882441 8.673048 10.627603 8.632469 NA 8.327263 7.477542 5.490846 11.496822 6.195159 10.813781 9.711975 7.038332 13.481473 10.513988 9.758286 12.465881 9.131873 9.769765 1.500904 TCGA-A2-A25F 66 0 NA 322 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 2 5 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 11.4709267 9.2455644 6.4135162 11.1533116 0.3647965 10.8990593 NA 10.1253100 11.4813603 7.5703051 9.3177888 8.6839768 8.7918596 9.7441347 7.1900330 9.9254714 7.8307307 10.9066274 9.1862116 8.7336994 9.3403177 9.8204946 11.4388979 11.0251089 10.1253100 10.7417499 9.3494597 10.1203116 4.3466095 0.6277936 11.2481634 11.5383086 12.5099880 8.9875403 9.9919254 9.2698425 10.0339958 4.5506237 2.9497217 8.1035244 9.2492322 10.3940437 7.0844874 4.2522794 NA 11.8359235 8.5114522 6.9616916 9.1933753 9.2127534 8.4308456 6.3602414 NA 15.0914610 12.2070879 4.1721114 8.5761582 0.3647965 6.1249774 10.0428283 11.0145515 9.8461523 10.7317342 10.0872224 10.2267738 4.2522794 11.4182750 10.5053305 4.1089175 8.6362193 1.7432564 7.1721114 14.9559865 8.4067548 11.4822696 11.2650194 10.4805804 2.4351485 NA 8.4437078 9.9897345 11.5106885 -1.9573557 3.5974120 6.7258229 11.2063208 11.1830190 6.7187849 9.3113703 6.7639281 10.7282341 11.8078035 0.8501593 14.0485405 2.5664012 7.6866847 11.8891022 10.3824000 13.0072143 6.4479692 9.6287297 11.0035543 10.6047916 11.4679131 5.2292880 7.8517928 12.3336391 8.3568450 1.8501993 10.4561918 10.1881236 2.2127561 2.0634339 10.5012349 10.3854585 10.4919769 9.5654098 15.0582869 10.4386302 11.0389487 6.1925749 6.0028308 12.5464677 5.7775381 12.8157098 12.3293139 9.8299146 8.9831418 8.3981793 9.6980952 2.9103e-02 1.2329e-01 6.6315e-05 1.0206e-03 1.3632e-02 -3.5312e-02 -3.0033e-02 -3.9396e-03 5.6919e-03 7.4265e-02 7.4265e-02 7.4265e-02 -2.8628e-02 -2.8628e-02 -2.1510e-02 9.3098e-03 9.3098e-03 2.7745e-03 2.7745e-03 -6.1286e-02 -3.2450e-02 -3.5585e-02 -2.6167e-02 -2.6167e-02 -2.6167e-02 4.8830e-02 4.8830e-02 4.8830e-02 -1.9687e-02 2.9103e-02 2.9103e-02 5.5459e-04 1.0206e-03 -3.5312e-02 -3.6677e-02 -3.0033e-02 -3.0033e-02 -3.9396e-03 -3.9396e-03 6.2481e-03 -2.4434e-02 4.3015e-02 7.4265e-02 -1.6567e-02 -1.6567e-02 -1.6567e-02 -1.6567e-02 -2.8628e-02 -2.8628e-02 -2.1510e-02 9.3098e-03 2.7745e-03 2.7745e-03 2.7745e-03 -6.1286e-02 -3.2450e-02 -3.5585e-02 -3.7626e-02 -2.6167e-02 -2.6167e-02 -4.5635e-02 4.8830e-02 4.8830e-02 0.0000e+00 -1.3862e-04 -3.5312e-02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.4251821 12.8551560 1.5022797 9.1944791 6.4393040 9.8229579 5.4774572 1.2127561 8.5386833 8.0258217 3.4351485 9.7650168 4.4003808 10.9935665 9.0064470 2.3647685 12.2155683 9.4129707 8.4617352 8.1021726 9.1811321 7.8741355 11.5873098 4.4178660 8.1539639 10.2267738 5.4522198 NA 10.9158878 2.5022542 13.3964921 12.0749601 8.7749959 10.2960849 10.0564999 9.8657974 5.2227389 3.8241874 0.0427844 0.0427844 8.1421760 8.4960988 8.1408604 7.1849358 5.0773541 5.3737456 9.9628088 4.8757162 9.5109431 2.6866798 10.6760506 5.6126828 4.0651931 9.7129843 5.6736412 8.9489673 10.5195745 11.3417500 9.4548689 4.0201110 13.6334446 2.6277936 10.4508927 NA 9.5431722 4.7010389 8.2351210 8.6193125 10.7596477 9.2534996 8.4722351 9.9919254 10.3771016 10.4251821 4.2522794 10.0662361 9.3804502 11.3620770 14.0522633 11.0463462 9.9897345 8.2692403 0.3647965 7.8820322 11.3808682 10.875125 4.328233 9.453804 7.814318 9.093228 9.759961 9.496613 8.261997 11.025109 8.511452 2.949722 5.300215 8.555322 12.404429 11.940957 8.157494 7.875718 11.367993 10.384069 9.846152 10.720768 11.139214 10.781554 10.750187 9.882032 NA 9.581551 9.502997 9.555569 11.183019 8.102173 10.826389 10.728234 8.450638 14.369346 10.366446 11.359817 12.929382 9.977993 9.526644 5.612683 TCGA-A2-A3KC 55 0 NA 635 breast stage iib t2 n1a m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma no 2 black or african american not hispanic or latino 202.42.0 NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.39057e-07 10.98208319 8.58157571 6.96142423 11.41973396 2.67601911 10.47799924 0.09112433 9.76701613 11.54570104 10.97650119 10.07310189 7.83477125 9.96193741 9.73371243 7.39179263 8.87460303 9.80702110 9.60215286 7.83252613 1.50609411 10.54020768 11.10531200 10.58190989 11.91548748 9.04331497 10.55492397 5.80987743 10.21861918 0.82806284 1.67604169 8.45300265 12.48623610 12.52803076 8.21172869 13.85468638 13.53136589 10.04961171 7.93863866 5.32627487 7.68849091 8.52011694 8.92078188 7.94072469 12.77061244 0.50609411 10.97726368 13.70615219 5.61462151 9.80305279 10.58624786 8.27096804 3.67601911 NA 13.89756770 11.81718634 2.50609411 8.82350927 1.31347806 5.59355994 9.98789596 10.30618749 9.97472059 11.11250174 10.11619864 10.41223554 2.20654946 11.31325016 10.90697595 6.57218633 8.02769704 10.69869755 11.08823848 15.21089178 8.68727349 11.61298655 11.18513671 7.78918475 2.89842121 4.91548744 9.01587162 8.96552804 11.57772649 NA 4.50609411 7.31666801 10.45080854 10.95910989 5.47188002 6.06068512 5.59355994 10.58391363 11.85786397 5.31345266 13.46854072 6.12080603 7.77053902 12.42010786 13.18183309 12.70461830 9.88222195 10.65330146 10.82096298 10.77910826 11.07761220 5.23401840 8.67602158 11.45135743 11.62292779 NA 10.35276217 8.69592111 1.50609411 3.78816366 9.13363031 11.15400459 10.29277462 8.71676803 14.67535607 10.17054377 9.59156891 8.98587665 3.86365107 15.54355769 10.05299102 14.23042385 12.35031190 10.20088966 9.92973775 8.43090912 10.90193319 -0.46238000 0.84613000 0.41346000 0.00180300 -0.00193990 0.00750000 0.00000000 -0.00105560 -0.00105560 0.00291330 0.00291330 0.00291330 0.00124810 0.00124810 0.01321300 3.65690000 2.76010000 0.00083195 0.00083195 0.00291330 0.00444110 0.00069327 -0.00691950 -0.00691950 -0.00691950 -0.00512270 -0.00512270 -0.00512270 0.43176000 -0.46238000 -0.46238000 -0.00055444 -0.01904000 0.00444110 0.00750000 0.00000000 0.00000000 -0.00105560 -0.00105560 0.00000000 -0.00193990 -0.00304750 0.00291330 -0.00332430 -0.00332430 -0.00332430 -0.00332430 0.00124810 0.00124810 0.01321300 -0.45779000 0.00083195 0.00083195 0.00180300 0.00291330 0.00444110 0.00069327 -0.46513000 -0.00691950 -0.00691950 0.00666530 -0.00512270 -0.00512270 0.43176000 -0.00332430 0.00291330 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4840918 13.4427345 7.3795404 11.1778587 2.8963494 11.0780861 2.0910566 1.0910566 8.7337126 9.7486752 -1.4937027 9.4242144 3.8280222 9.7155499 9.7415125 3.6353829 9.6621797 9.9665525 10.5576454 9.9969474 9.5228283 8.4368339 11.2276230 3.8280222 8.6146211 10.4122355 5.3005118 -0.4939059 10.8138665 3.5060941 12.2156112 11.6105315 8.6353797 10.3266744 8.6054443 9.3523703 6.8548248 2.2065495 1.8280222 5.5173229 9.1925971 9.8223780 9.9752295 5.3134527 8.9118974 7.7057685 10.2259132 6.7008530 9.4653740 NA 11.7807659 2.4129983 5.4009136 9.4207731 6.5561627 5.2609854 9.8347714 8.6583815 7.4919389 0.5060941 13.3109334 3.0910566 10.3114374 NA 8.1553526 6.9939370 7.4976188 8.8098774 14.436530 5.715550 8.250930 13.854686 10.279236 10.275934 12.770612 11.647246 10.903343 10.641164 13.142438 12.010171 8.965528 8.417488 2.506094 7.157148 11.991800 11.4489775 7.6405226 8.1372735 8.5463863 8.8724188 10.6869537 7.3887397 7.1281480 11.9154875 6.9531802 5.9490399 7.2134552 7.0688728 11.2327404 10.6087284 7.9798024 8.8930366 12.0744090 5.9069772 9.9747206 10.2030641 11.7574310 10.8206797 10.8158571 8.5131239 0.8280628 9.2365498 7.3222806 6.5829127 10.9591099 6.6959215 11.0939819 10.5839136 7.1827946 13.4425951 9.2800599 9.7845460 12.6486025 10.9823364 9.8252042 2.0910566 TCGA-A2-A3KD 47 0 NA 1206 breast stage iiia t3 n1mi m0 2-10-2014 female 2010 NA NA mucinous carcinoma no 1 white not hispanic or latino 202.42.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.120567e-08 4.560284e-08 11.0605715 8.9166453 5.8309525 11.4104246 -0.7538960 10.6071104 0.2459824 9.9215051 11.9848202 8.6307728 9.9050930 8.1840983 9.4134073 9.5319691 7.6447331 8.6013403 10.5497698 9.1626149 7.2059906 3.2903802 10.1648523 10.1961804 13.7423748 11.3974814 9.0985185 10.4174786 4.7378436 10.7214590 -0.1690957 -0.7538960 7.8177416 12.1999127 12.5206584 7.8459021 13.1262900 13.1419430 10.8146578 7.1767267 5.7695523 5.9941814 8.4456613 11.9294223 6.6340065 13.3850607 4.7378436 10.4299346 13.5835064 9.4566604 9.0317847 10.8398470 8.2232690 9.9368601 -1.7538960 14.1632849 9.2752762 3.9184149 9.0597703 0.5679348 4.6035433 9.8808001 10.6353516 9.5537591 11.0647709 10.1377727 10.1000783 1.2459824 11.7311894 10.3954187 6.7217226 7.8101384 17.6839829 11.9039774 15.0033791 8.0124681 11.8159633 11.6916506 7.8234182 3.2001904 4.2232681 9.4645523 9.1811540 11.1109490 NA 2.6383056 7.6659491 10.1461011 11.8457857 6.1648526 5.3440224 4.2459900 10.2537172 11.4325676 -0.7538960 13.4137600 4.9739097 7.1286326 12.6667388 12.2261287 12.7721215 8.7478261 10.9451277 10.8447395 10.6113875 11.6007894 5.3957346 8.3241400 11.6576325 11.7713875 -1.7538960 9.9971147 8.7567531 2.6383056 3.2006456 10.0476975 9.9010725 10.8144202 9.0605716 14.6889649 10.2927721 9.9950205 8.2117735 2.0533547 16.1855109 8.8110911 13.8605264 12.3522248 10.0129320 9.3681699 8.4962874 11.1282404 -0.00412210 0.88111000 0.88111000 0.00239060 0.00239060 0.00906390 0.00650160 0.00000000 -0.48741000 0.00725440 0.00725440 0.45687000 -0.00072958 -0.00072958 0.44600000 0.44600000 0.44600000 -0.00633440 -0.00633440 0.00600260 0.46148000 -0.00301510 -0.01557200 -0.01557200 -0.01557200 -0.00882030 -0.00882030 -0.00882030 -0.00675390 -0.00412210 -0.00412210 -0.00052195 0.00239060 0.00906390 0.00369380 -0.00251550 -0.00251550 0.01017800 -0.48741000 -0.48846000 -0.00421870 0.00086446 0.00725440 0.00308470 0.00308470 0.00308470 0.00308470 -0.00072958 0.01827600 0.44600000 -0.48005000 -0.00633440 -0.00633440 -0.00633440 -0.00297060 0.43965000 -0.00301510 -0.49577000 -0.50295000 -0.01557200 0.00572450 -0.04966300 -0.00882030 0.00030978 0.49530000 -0.01323200 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.450 0.000 0.000 0.000 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.450 0.000 0.000 0.000 8.4903527 11.6849108 5.6553805 10.2866213 3.3752758 10.2603583 2.3334524 NA 8.4603080 7.7054209 1.2459824 7.3597311 1.9464314 10.0903025 9.4134073 1.2459824 9.0199523 9.3726936 11.5783054 10.1228897 10.0468323 8.3307972 10.4033360 2.7695602 9.3314616 10.1000783 5.6296947 NA 10.6688423 2.7054250 11.7364639 12.6788572 6.7577420 9.6585589 7.2459890 9.1293961 7.1528801 -0.1690957 -0.7538960 3.9464314 8.6648959 10.8419458 9.8110911 4.4554456 9.1778199 8.3701102 9.3810571 8.3187918 8.4008073 0.2459824 10.5721376 3.9464314 8.2074385 9.4026915 6.7156710 4.6553805 9.9223870 8.5531900 7.9840812 NA 13.0862261 NA 9.9546418 -1.7538960 8.6992598 5.9670879 7.7217226 9.0629727 14.0453699 5.5497708 8.4639469 13.1262900 10.4499488 10.9305186 13.3850607 12.3219695 8.5116040 10.9717813 13.2455928 11.2775180 9.1811540 8.7567531 0.8309854 6.9464291 12.2517890 11.196363 7.082039 8.913101 9.074919 8.324140 10.245073 6.701316 9.156632 11.397481 5.939476 3.830955 8.783207 6.181566 12.264537 10.512190 9.417560 9.151376 12.553403 6.217533 9.553759 10.482900 10.826248 10.689192 10.650332 8.759717 NA 8.991403 8.016851 6.838446 11.845786 7.668054 10.717156 10.253717 7.785148 13.547307 9.621029 9.538311 13.190655 10.362333 9.581379 2.415921 TCGA-A2-A3XS 62 1 1032 NA breast stage iiia t1 n2a m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 9 black or african american not hispanic or latino 234.26.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5.284165e-07 1.112456e-07 12.4860063 5.7681234 6.0655098 11.9073050 -1.6069133 9.5319958 -1.6069133 8.1907457 11.2990351 9.8652671 9.4126748 8.7583128 9.2020481 10.6249053 6.2004396 8.5081275 9.4175312 10.3130646 8.4712350 4.9929950 10.8489250 12.1914546 12.6597242 11.1307539 9.0743224 10.1858743 6.6784861 10.5576768 2.7854041 3.7854041 7.8667899 10.9346647 12.7120505 6.2510658 12.6737098 12.1745462 10.4337162 5.1874986 2.3930867 9.0160511 8.5159119 9.1269468 7.3267746 6.5779590 NA 12.7228804 9.5939826 10.3311934 10.2388916 10.6718239 8.3746513 4.6025400 -1.6069133 13.8880046 8.8810950 2.9780492 8.8224908 0.9780492 4.4805495 9.2580440 9.8718537 9.1818025 9.6761724 9.7071008 9.9303024 9.5933696 11.0315199 11.1481803 5.3238204 6.1809872 3.0935264 12.0324248 15.0350934 8.0711910 10.6954374 10.0378416 9.3392592 -0.6069133 0.7150147 9.1587846 8.6586992 9.6164825 0.7150147 3.7150147 7.6645468 11.0530800 9.5152650 4.9476708 6.1875005 4.8849349 8.3689320 11.7151530 -1.6069133 13.1419058 6.1073301 7.1073301 10.9440713 14.7255053 11.9819158 8.2772544 11.6102845 11.0094032 10.6340662 10.1947924 4.5223697 8.8979029 11.2148580 10.0256249 NA 10.5988773 9.7042647 8.5390161 4.3657765 9.0315201 8.9657843 10.4140640 8.6492928 14.6507850 10.5129979 9.4950597 7.8688176 4.2757297 11.9198278 8.8939258 12.3032583 11.5393345 10.3778585 10.0288022 7.9361161 11.7195613 0.2956500 3.6569000 0.1140400 -0.2891000 0.3386900 -0.0092666 0.0130190 0.6907300 -0.1852100 -0.4553300 -0.4553300 1.8047000 1.2510000 -0.4760700 -0.2398500 -0.2398500 -0.2398500 0.2780500 -0.2614100 1.1139000 -0.2974500 0.4273800 -0.0047079 -0.0047079 -0.0047079 0.0068044 0.3530000 0.2817100 0.4493500 -0.5254200 0.2956500 -0.5736700 -0.2436300 -0.4942300 -0.5134200 -0.7681700 -0.7681700 -0.2617900 -0.1859700 0.0249690 -0.0276710 0.2100800 -0.4553300 0.3769300 0.4107800 -0.4449100 -0.4551100 -0.4760700 -0.6804000 -0.2537000 0.2956500 0.2780500 -0.2614100 -0.2593800 -0.0918160 -0.2974500 -0.5182500 0.0000000 -0.0047079 -0.0047079 0.1716600 0.0068044 0.2817100 0.3739700 -0.0018491 -0.2097300 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 9.0031862 13.4446754 4.3472830 9.7918277 4.1726075 12.0318593 5.5223665 6.9205613 9.3407209 6.6692082 6.6831027 7.4320031 3.8525183 9.7654050 9.6738548 5.7329339 8.7950302 11.1008745 6.8235367 9.9404606 8.6760336 6.9515050 11.2609419 2.5630117 9.1488063 9.9303024 5.0655077 NA 10.8634887 2.2999773 12.6871304 13.4598460 8.5667611 9.7262395 10.2448331 10.0165083 6.1678717 1.8525183 0.3930867 -1.6069133 9.1809867 10.2287397 7.5878413 6.5326349 10.2153044 8.3119472 10.3432755 6.1277942 9.9543720 4.7150147 11.7458172 2.6410142 5.3119463 9.5761300 6.9743974 5.9629400 9.6308916 8.0278949 7.6146708 9.6657138 13.5414017 2.2999773 11.2082672 -1.6069133 9.8606896 8.0637402 8.7626813 9.1645736 8.888179 9.376078 8.117598 12.673710 10.519466 11.072564 6.577959 11.441911 8.816652 10.570192 14.290646 11.402913 8.658699 8.488481 3.678489 7.781101 10.478556 10.5748575 5.6025371 8.8277123 9.5655115 8.5223669 9.6680737 7.7615905 7.7637714 11.1307539 9.8969098 3.1479742 10.9483921 9.3579447 12.0192494 9.8566084 7.5655119 9.8209207 7.3355985 6.4320023 9.1818025 10.1976185 12.2164513 11.6806522 10.0169655 7.6831027 4.3472830 9.5365501 7.0077943 7.5197888 9.5152650 5.3588674 10.9055875 8.3689320 7.4494508 14.3512742 9.8794163 10.1801704 12.4157986 11.6507665 8.9827352 0.9780492 TCGA-A2-A3XT 45 0 NA 2525 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 234.26.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.835552e-06 3.893595e-07 11.0421044 6.1372535 5.4640638 11.2189508 NA 8.9679965 0.5765705 8.2976371 11.0128331 9.1410687 10.0359696 7.5469315 8.5143531 10.6033381 6.4295356 8.6426272 8.4370042 9.1125909 8.8329827 4.9688557 11.0530817 12.1293031 11.2906118 8.6512146 9.8484679 9.3644405 6.8206640 10.4110059 -0.7454060 0.8395565 8.2574251 10.6560227 12.9218878 6.7464633 10.3944810 11.3232202 9.9327699 7.0555102 2.0619490 6.8206640 7.5284057 10.1311268 5.6724621 2.2546243 0.2545940 11.5352357 10.0867088 8.0211388 9.5170806 9.8752880 9.1211162 4.6639992 2.4245459 14.8819671 12.6832416 2.0619490 9.4906241 NA 4.0359669 8.7771915 8.6798260 8.3979933 9.3447222 9.7369136 10.1753350 1.2545940 10.4885291 10.3044585 4.2318932 7.4170010 -1.7451641 8.4469026 14.0579843 8.8947193 10.1801644 9.4610138 11.8455478 -0.7454060 -0.7454060 8.6871517 8.6372338 10.2211153 0.8395565 4.5765403 8.3722530 11.2816519 9.9020683 5.0875010 6.7262849 5.8912345 8.4220282 11.9262615 5.0490252 13.1793296 3.5400149 6.3367583 11.1693687 12.0431243 12.0614616 9.4018148 10.5863667 10.0498379 9.6397442 11.3088750 4.4444352 8.3657455 11.7399361 10.4232820 1.4245459 10.7132728 9.9778442 4.1615008 4.0920467 9.6410113 11.4295356 9.3186791 8.9270354 14.5860867 11.5713157 10.2211153 5.4345181 0.8395565 10.7825756 5.1125917 12.7711718 11.6948302 8.8367520 9.3473671 7.2962693 10.1599442 0.653620 1.038000 1.338100 0.000000 0.243330 0.124080 -0.474230 -0.082826 0.450100 1.006800 1.006800 1.236700 0.628140 -0.450350 0.185620 0.185620 0.185620 0.399180 0.093971 0.184070 -0.148570 0.324210 -0.452180 -0.452180 0.514370 0.128950 -0.446590 -0.472640 0.135750 -0.045359 0.653620 -0.651420 0.000000 -0.444110 -0.430030 -0.447880 -0.447880 -0.082826 0.450100 0.546900 0.106200 0.095509 -0.330700 1.166000 -0.079687 -0.079687 -0.455710 -0.450350 -0.450350 -0.396040 0.185620 -1.067800 0.093971 0.093971 -0.504180 -0.148570 0.311200 -0.754230 -0.452180 -0.452180 0.107220 -0.370490 -0.446590 0.135750 0.118500 0.791180 0.120 -0.450 0.114 0.114 -0.253 -0.253 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 0.120 -0.450 0.114 0.114 -0.253 -0.253 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 9.230458 12.371279 1.424546 10.455508 4.612164 11.075387 3.680876 -0.745406 9.210260 7.149428 NA 6.493015 1.955052 11.155477 9.720176 4.112592 7.799574 11.362971 6.680874 10.455815 8.593469 6.439485 10.910811 2.161501 8.911928 10.175335 3.424532 -1.745164 11.558819 5.714042 13.687641 12.294557 6.185347 9.629649 9.229741 9.850800 1.254594 4.061966 0.254594 -0.745406 9.560102 10.156608 8.330089 3.299010 11.668047 8.007827 9.995234 3.383898 11.039245 4.087497 12.955808 3.680876 4.778172 9.738743 8.858672 4.576540 9.206623 9.021139 7.399269 0.254594 13.511519 -0.745406 10.144494 -0.745406 10.534511 3.383898 7.594460 8.164503 8.860201 7.296269 9.050649 10.394481 9.339418 12.680350 2.254624 10.740691 8.486539 10.279057 12.475970 12.590000 8.637234 9.152455 4.424532 8.044144 11.435296 10.1719820 5.6383143 8.7564472 7.7722796 8.6415500 9.5357112 7.3314258 5.7937685 8.6512146 11.1945564 2.0619490 4.2769805 9.7887960 11.5305889 11.1218886 8.6756226 9.0474002 8.5595316 5.9056614 8.3979933 10.6358824 11.9912232 11.7885480 10.1868246 8.7089094 NA 9.7771914 7.1674994 6.0490252 9.9020683 5.6975542 11.2701992 8.4220282 8.6353307 14.9230794 10.9912232 10.9380432 11.8423874 10.6782511 8.5376983 0.5765705 TCGA-A2-A3XU 35 1 912 NA breast stage iib t2 n1mi m0 2-10-2014 female 2006 NA yes infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 234.26.0 NA NA 3 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4.171709e-07 1.112456e-07 12.1001792 0.6663021 5.1898957 11.4589199 -1.3335161 7.9632493 NA 8.6044424 11.0136775 9.0778441 9.2828818 5.9701128 7.7748575 9.3440526 6.9189980 8.6349998 9.7702764 9.6907801 6.8709047 0.2513252 10.9407111 11.3460330 12.3163750 9.7643651 9.3002363 9.5281952 3.1898878 9.4220551 0.2513252 3.0586455 4.7107293 11.3140163 12.2879270 7.5459159 11.6546626 11.1498968 9.4920867 8.0216840 5.2361903 9.3011441 9.1711520 6.5489760 9.8474852 3.9882575 -0.3336979 11.4982340 12.0861615 3.0586455 10.3568461 11.0973081 7.1216599 3.6663362 NA 12.7481526 6.9095067 3.7107238 10.3422901 NA 5.5366964 8.1481323 9.2161177 9.1800606 8.2883849 7.8999526 9.9272525 2.8362675 9.3466926 10.0543502 6.6263355 7.3065776 NA 6.1898957 12.6217104 6.9416662 9.6810509 9.0554264 9.4583098 6.6378768 0.6663021 8.2054917 7.4245560 10.3878594 NA 3.3667698 7.4704637 9.3272203 11.4825167 9.4320334 1.4736830 4.9701128 6.0238852 12.2088812 1.8362473 13.6989384 4.3667698 6.2736632 10.2961449 15.5095180 11.5245083 8.9735338 11.4431772 10.1056444 9.8635496 8.8806522 0.2513252 9.1820328 10.6252481 7.1339385 NA 9.6747616 9.7865709 NA 0.2513252 7.6088477 12.0463881 8.9701137 8.4623726 15.3083143 10.0645422 9.2006358 6.2209219 4.8160825 10.4664240 4.8757850 11.7678163 11.1445970 9.3281110 9.3119914 6.1092770 10.1756132 0.6688900 1.7720000 1.7720000 0.0087689 -0.0184350 -0.0815510 1.0979000 -0.0298020 -0.0298020 -0.8747800 3.6569000 2.4820000 0.0163470 0.0728850 0.0369920 0.0369920 0.0369920 0.0053310 0.0053310 -0.0321220 -0.8821700 -0.8415100 0.1284500 0.1284500 0.1284500 0.1326400 0.1326400 0.1326400 -0.8195500 -0.7782600 -0.9087800 -0.0360740 0.0784970 -0.0160980 -0.0815510 0.5007100 0.5007100 -0.0298020 -0.0298020 0.0013041 -0.0005067 -0.0170610 -0.8979100 0.0471830 0.0471830 0.0471830 0.0471830 0.0291870 -0.8471200 0.0369920 0.0000000 0.0053310 0.0053310 0.0053310 -0.8819800 -0.8821700 -0.8278600 -0.0926890 0.1284500 0.1284500 -0.2757800 0.1326400 0.1326400 -0.8382200 0.9154900 0.2718100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.133 0.133 -0.846 0.926 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.056 0.524 0.000 0.000 0.000 0.000 -0.867 2.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.133 0.133 -0.846 0.926 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.056 0.524 0.000 0.000 0.000 0.000 -0.867 2.411 0.000 0.000 0.000 5.0757251 12.5974398 5.0925965 7.1898947 1.4736830 10.1982018 NA -0.3336979 9.9927625 5.2662468 8.0194795 9.3624311 7.5672001 11.2477689 9.5619082 1.2513252 3.3101947 8.0693450 3.9142583 10.7035367 8.7381842 5.2361903 11.4509678 NA 10.7790982 9.9272525 4.2810454 NA 10.2750498 2.5732291 14.1880561 11.9481181 5.5366964 8.9071244 6.9284284 10.3545833 0.2513252 1.6663476 -1.3335161 0.6663021 9.9331195 10.9363362 5.0061813 1.2513252 9.8891761 10.6733602 10.8055645 3.8362574 9.6719575 0.9882666 11.4748950 NA 2.6663249 10.1516743 8.4398018 4.5489791 8.4897003 5.3387596 7.9237209 6.5792224 14.9432389 -1.3335161 11.6843592 NA 9.4086425 4.0586542 7.7243249 6.9284284 11.266824 9.013954 8.140039 11.654663 9.590403 12.795535 3.988257 7.084185 8.781181 9.725677 13.983675 14.148952 7.424556 9.191854 4.023885 7.870904 8.623435 10.206945 2.125750 7.277358 9.470464 8.528970 8.926688 5.058650 6.075723 9.764365 11.452398 8.273663 4.220918 9.046112 9.511039 10.313342 7.724325 11.411167 1.666348 4.732421 9.180061 9.992201 10.765023 11.600577 10.355457 7.010629 NA 9.429628 5.826205 5.561152 11.482517 3.573229 11.762981 6.023885 7.366772 14.463133 10.448922 10.323651 11.991498 11.567766 9.068279 7.454235 TCGA-A2-A3XV 46 0 NA 996 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 239.28.0 NA NA 2 3 NA NA 2 6 1 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.029022e-06 1.39057e-07 11.7648716 4.6407482 3.7827650 10.7869897 NA 8.0727881 NA 8.1534568 9.7614798 7.9824415 8.6077279 7.3258010 5.7369647 9.8298932 3.4266271 8.2360400 8.9261525 9.0055642 6.7600493 3.1750934 11.5565267 10.1114443 13.3566531 9.0067710 8.9120522 9.8086010 4.8702315 9.0163891 NA 1.5901469 6.2339801 8.6684656 12.5801268 6.2746232 15.2270401 12.5732196 10.3516755 8.9861174 4.6407482 5.6029497 7.5140883 2.8702266 5.5509530 11.9517547 NA 10.0265384 10.0894007 NA 10.3926544 10.5731178 8.2298527 10.4202999 4.6156576 14.5961128 8.5376568 -1.2172560 7.0542320 NA 7.3141509 8.8448153 8.9030072 8.0163888 8.5140883 7.6745532 9.8002737 0.3677065 9.0876909 9.4011547 8.1001819 7.2826149 7.4374050 8.1772321 13.2517115 2.7295093 8.6546747 9.0460386 5.4832096 1.9527063 3.7369620 4.8051377 6.6282589 10.5538460 0.3677065 8.0067710 6.3141509 7.3752263 10.0079767 3.4266271 3.7827650 4.2746195 8.6577507 11.4536468 NA 13.7113339 5.9223216 4.8051377 11.1281745 12.1479981 11.4423193 6.5509530 11.3796578 10.0831219 9.4944362 8.9133397 NA 10.4991600 12.0513113 8.3900997 NA 9.6148681 7.7252838 NA 1.5901469 8.1729385 10.0652785 8.7340542 9.5098389 15.4896160 10.4338210 8.2215610 7.0542320 1.7827860 15.1597425 8.9750621 11.9779877 12.0983434 8.6851444 8.7742913 5.9626786 8.5377402 -1.8014e-03 -1.8014e-03 2.4689e-02 9.2892e-04 1.6286e-02 1.4190e-02 1.0982e-02 6.4564e-01 -6.6798e-01 -1.4455e-03 -1.4455e-03 -1.3127e-02 -8.7146e-03 -8.7146e-03 -5.5375e-03 -2.0824e-02 -2.0824e-02 -1.5243e-03 5.4247e-03 9.3098e-03 -3.3243e-03 -2.1784e-02 -6.9622e-01 1.5920e+00 5.8901e-01 -7.1338e-02 -7.1338e-02 -7.1338e-02 -4.9262e-02 -5.3739e-02 -1.8014e-03 8.4743e-03 2.9133e-03 1.4190e-02 1.4190e-02 1.0982e-02 1.0982e-02 6.4564e-01 9.8706e-02 -6.9323e-01 4.5225e-05 4.0243e-03 -1.0158e-02 -6.6669e-01 -6.5715e-01 6.3134e-01 6.0573e-01 -8.7146e-03 -8.7146e-03 -5.5375e-03 -1.8014e-03 -1.5243e-03 5.4247e-03 5.4247e-03 7.1814e-03 -3.3243e-03 -2.1784e-02 -3.2314e-02 -6.9622e-01 5.8901e-01 0.0000e+00 -7.1338e-02 -7.1338e-02 -2.6441e-02 -1.3953e-02 -5.9135e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 7.5575564 11.8898228 3.7827650 8.0306969 0.3677065 10.6945358 3.0306892 NA 10.0001212 7.3863954 NA 5.6654127 3.0306892 10.7643365 9.4797368 1.1046721 5.7252831 7.9799859 11.3634989 14.9129175 10.1320394 5.7016322 10.3267678 -0.2172560 8.0933822 9.8002737 9.2329495 NA 10.1836488 1.5901469 14.1323270 13.0888310 7.4516546 8.9451605 7.8106751 10.9967848 2.2422061 2.4832096 NA 2.1047057 10.6368585 12.8378822 9.1889743 2.2422061 8.1931784 11.3905619 9.5409924 6.8595845 10.2701069 -1.2172560 10.1921603 NA 3.6407482 10.2177102 8.4890752 1.1046721 8.1447133 8.3199877 4.5106898 4.6654098 14.9011426 -0.2172560 11.7300409 NA 6.8106757 5.6282603 7.6926622 8.0259435 11.593140 7.537657 9.639973 15.227040 10.555496 11.926471 11.951755 8.244249 8.231918 9.140321 12.077103 10.533476 6.628259 8.423014 NA 8.373356 7.924877 10.0704816 3.9922246 8.5690387 7.1403216 8.8244283 9.5889563 5.3063315 8.5869002 9.0067710 10.2339804 0.7827440 5.8808006 7.9083896 6.8965116 10.7586172 8.0023008 12.2280429 1.7827860 4.6156576 8.0163888 10.1616059 7.4587265 9.2615388 10.4297779 5.8595845 NA 10.0184844 6.6219727 2.1047057 10.0079767 5.8702315 10.7866385 8.6577507 7.7589900 15.3820138 10.8312562 10.5455666 12.4691604 10.4740766 9.1359160 0.3677065 TCGA-A2-A3XW 42 0 NA 1505 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 239.28.0 NA NA 2 5 NA NA 2 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.560284e-08 3.040189e-08 11.92126635 7.96066287 5.34877064 11.96897596 0.50324695 8.43991979 NA 8.37210456 10.83867237 7.76067006 8.87614702 7.04631425 8.52148227 10.50257745 5.89559830 8.23460095 10.87913598 9.21494901 6.59074422 5.51451050 11.37826337 11.89237554 13.46690062 10.10505285 8.01700936 10.32505603 7.28464183 9.18182064 2.82521576 2.31063096 6.85201008 11.96527298 12.11384551 8.11430663 13.28740560 12.04969420 10.27848070 7.02684431 3.89560315 8.77824242 9.08165466 11.14307493 8.40866898 10.91981565 NA 11.29647886 13.22518223 8.60788065 10.68879240 10.78056938 6.25817027 4.80706120 0.08827731 15.21126267 10.40641071 3.50328512 8.77474490 0.82521576 3.50328512 8.96986825 8.61702403 8.96271356 9.92587247 7.94207401 10.81133656 4.08824338 9.80934370 10.58310007 7.90202593 7.91902359 -0.49675305 8.97495715 14.63473710 6.21484558 9.84646777 9.43771005 7.67070015 3.50328512 7.31706343 7.55313084 6.78405242 10.77562016 -1.49654949 1.96269708 8.68567634 9.29118452 10.03271263 4.89559830 4.56936957 3.50328512 8.24643327 11.25796080 3.82520558 13.12624896 6.50328194 6.25147484 10.38439599 14.59744219 11.38133291 8.99212629 10.44762806 10.12533378 9.87287938 10.79675364 3.67320588 9.83419892 10.01947453 9.01404614 2.31063096 11.03904337 8.27477136 10.60492947 4.21588047 8.81048295 10.89156842 8.36126305 8.59074497 15.70072987 10.21408849 7.72245031 6.35503036 6.80706249 14.63692596 10.64251359 13.33012839 12.90975278 9.89129933 10.48556258 6.16861797 10.40344690 0.00041593 0.00041593 -0.00318590 -0.00083160 -0.00083160 0.00346870 0.02468900 0.26279000 -0.11926000 0.00130200 0.00130200 0.00097064 -0.00484610 -0.00484610 -0.05632100 0.00305220 -0.11254000 0.11125000 0.11125000 -0.12148000 -0.07013500 0.01279500 -0.10590000 -0.00470790 -0.00470790 0.00471900 0.00471900 0.00471900 0.09463700 0.00041593 0.00041593 -0.00054926 -0.00083160 0.00346870 0.00346870 0.00265910 0.01014600 -0.10618000 -0.11926000 -0.11926000 0.11561000 0.02189800 0.03651200 -0.00286070 -0.00286070 -0.00286070 -0.00286070 -0.00484610 -0.00484610 -0.05632100 -0.11254000 0.11125000 0.11125000 0.11125000 -0.11900000 -0.10605000 0.01279500 0.00263570 -0.10590000 -0.00470790 -0.00235530 0.00471900 0.00471900 -0.00816240 0.12108000 -0.00277070 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.41242504 12.99507248 2.41017826 10.10365958 3.45747610 10.31545936 2.41017826 3.78868571 9.65810006 13.06784834 3.59074572 6.36746892 6.63770877 9.66189173 9.79962469 3.08824338 8.52148227 8.48199232 9.22779594 11.25210380 9.47968145 6.48056242 11.18078147 2.96271558 7.34248541 10.81133656 7.44872589 NA 11.36048549 2.82521576 13.66543728 12.42084056 7.54494126 9.30013288 10.44249393 10.18978256 2.67321719 NA 0.50324695 6.81616448 9.49338595 11.04219842 7.31063732 5.07313899 7.99789754 10.06790783 10.33498507 5.39810064 9.64921414 NA 12.74987418 3.89560315 5.91267381 8.98329463 6.70305224 0.82521576 9.75417249 8.13809308 9.29200038 15.10079631 14.53105845 0.08827731 11.68101298 NA 8.73450336 5.27146676 7.31706343 9.10876149 13.307030 5.323460 7.520091 13.287406 10.014541 10.285871 10.919816 10.922452 8.902325 10.017996 12.267221 13.444742 6.784052 7.739296 1.088277 6.865226 9.671954 10.89291335 3.92954485 8.54357167 9.55517061 6.96680650 10.11382706 8.13445918 9.44945717 10.10505285 7.77006852 3.67320588 7.85422136 7.99343095 10.08306933 10.49904920 8.15970688 11.27456510 6.98709799 7.54220077 8.96271356 11.98760144 9.38974081 11.70525274 10.53118805 6.60131470 0.08827731 9.75881816 7.11799211 3.99513172 10.03271263 3.31063096 12.13035984 8.24643327 6.99913751 14.17249927 10.53842477 9.88590605 12.40414882 11.18737311 9.01700964 -1.49654949 TCGA-A2-A3XX 49 1 1439 1168 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 239.28.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.952849e-07 1.112456e-07 12.710099 5.040108 7.226633 13.726497 -1.544982 9.079939 NA 8.354501 11.576353 8.782696 9.143394 7.962938 8.845313 10.002520 9.632563 7.926819 10.316618 10.551529 7.954990 3.978708 11.323195 12.591814 14.334200 10.561707 9.138138 10.650824 6.510426 10.122694 2.978708 6.812696 7.102602 10.328972 11.753493 6.531960 12.855556 12.573923 9.108885 6.654816 4.542605 10.349583 8.974780 9.983109 6.950999 5.803873 NA 12.466546 6.821465 9.303767 10.213442 10.355633 8.885596 5.740547 -1.544982 15.060730 9.276918 2.978708 10.064322 -1.544982 5.821465 9.055986 9.364287 9.379214 9.044795 9.179658 10.525265 12.284966 10.850678 11.145797 4.455143 7.246306 4.409343 7.801657 15.929499 6.761615 10.701291 10.156883 12.389387 1.777072 7.688764 9.568235 8.080853 9.586358 NA 5.084502 8.038227 9.915088 9.926311 6.432423 6.183064 4.542605 9.235684 11.929357 4.313122 13.267020 5.674311 7.141644 10.013086 14.991209 12.268223 9.803872 13.078739 10.979685 10.747750 10.856557 4.432425 8.278511 10.887686 12.093919 2.262493 10.512459 10.570838 2.362021 4.703450 9.440274 12.029382 9.379956 9.504312 14.960785 10.466021 9.846387 4.930879 3.914574 11.946370 8.950999 12.890423 12.053894 10.405700 9.886641 7.183065 10.674197 0.7260300 1.5118000 1.4902000 -0.2786700 -0.2480200 -0.0012473 0.6053900 0.5147200 0.2501200 -0.3807800 2.3814000 2.2828000 0.1498500 0.0813220 -0.2834600 -0.2834600 -0.2526100 -0.2630000 -0.2755500 -0.2761800 -0.2896400 -0.2806100 0.1051200 0.1064300 0.1064300 -0.2705700 0.4527800 -0.7012700 0.4864700 0.0000000 0.0043027 0.0874580 -0.2786700 -0.0284420 -0.0294060 -0.3063300 -0.3063300 0.5143800 0.2501200 0.2501200 -0.0094630 0.1165300 -0.0120240 -0.2964600 -0.2964600 -0.2964600 -0.2964600 0.0813220 0.0813220 -0.2834600 -0.2537900 -0.2630000 -0.2755500 -0.3032200 -0.2572100 -0.2896400 -0.2806100 0.4321100 0.1051200 0.1064300 0.4116100 -0.2705700 -0.0899640 0.0639020 0.5192600 -0.0101750 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 8.2166949 12.9685012 3.7770725 10.2166949 3.9787082 13.5516530 4.7770725 4.8814101 8.9599628 7.7101721 9.0010735 7.9660463 3.3620350 10.9482486 9.4223699 3.8814101 6.9943025 10.7419902 8.9549896 10.1932359 9.3861397 5.4324250 11.7128262 2.0401209 9.1932361 10.5252646 4.9145741 NA 11.2458995 3.4551496 12.1342939 13.5006474 7.9125247 9.6010758 9.7411238 11.5687231 1.9145645 1.7770725 NA -0.5447714 9.2982796 9.5818481 6.1762430 3.8474658 10.2139749 9.3567649 10.1594797 5.3499632 12.1108980 7.4324233 12.1260212 3.3131297 4.0698568 9.5830284 7.2962995 7.4005875 9.0447949 7.4858108 9.8060830 11.7937408 13.2666188 3.4995398 11.5810415 0.4551233 9.1284527 8.6572677 8.3454079 8.3590256 8.954501 8.134624 8.562361 12.855556 9.290405 11.857223 5.803873 10.656349 8.831269 9.729522 13.353273 12.820509 8.080853 8.535961 6.313124 7.868772 11.223535 10.6727985 5.2365041 8.4266874 9.2405963 9.1873112 9.9704000 7.3469276 6.6498999 10.5617067 6.7266065 0.4551233 9.7341739 10.2505462 11.9624429 9.3888344 8.1381381 9.1813620 6.4775122 7.2397789 9.3792139 9.9634337 12.1647661 12.4655844 10.4252496 7.8038722 NA 9.9077402 7.9885512 9.0363443 9.9263108 5.9145765 10.7598230 9.2356835 7.5870004 13.4351940 10.5165149 9.8840273 12.2759210 11.5943753 8.9698579 2.0401209 TCGA-A2-A3XY 49 0 NA 1064 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 239.28.0 NA NA 4 1 NA NA 2 5 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 8.621532e-07 3.893595e-07 12.1788973 8.0476060 7.5237752 11.3488588 -0.9254946 9.1420606 -0.3404407 9.0310023 11.6654471 9.6684842 9.1733164 8.0024044 7.8803702 11.0529791 8.1961595 8.8747171 10.3419981 10.4335521 8.8924092 5.5584421 10.9641302 12.1116583 12.7522357 10.8862016 9.5050787 10.3758366 7.2937944 9.8181942 5.9994386 2.3965431 8.9777550 10.9957233 11.8605894 7.4233546 12.0231759 10.7180315 11.1292305 4.2039059 1.5340616 9.1087374 8.5330330 11.9883571 7.9388121 5.9994386 -0.3404407 12.2374895 7.7346222 8.6708159 9.5326022 10.6555914 10.2026205 4.8295147 0.8819778 15.2638726 9.3571354 2.7184822 9.2344975 NA 4.2840773 9.5724780 9.7785297 8.7845717 9.1380214 9.1142306 10.7285909 2.7750716 10.6023476 11.3152685 5.2344975 7.0229936 1.8819778 6.6137850 15.5525742 8.6693985 10.5188647 9.8559860 8.5624661 2.9815239 -1.9252206 8.1285522 11.3327505 11.4228011 -1.9252206 4.8948032 7.4861375 9.8888081 9.8678231 6.6444822 7.1380209 5.5422333 9.8617126 11.4885185 4.2840773 13.5225811 4.5981865 7.2865143 11.5876135 13.6892785 12.4088995 7.6330468 10.2758312 11.4554931 10.5833940 11.1649040 4.8025448 8.6186248 12.2860582 11.3831074 3.7470543 11.1154296 10.3657968 2.0746424 4.6935985 9.7694194 9.3823962 9.6406802 8.9043489 14.7685487 10.6701168 9.3588720 6.3692466 5.8884072 11.6957623 9.7910170 13.6425526 12.4173954 9.9660302 10.3812575 7.5217096 10.1894389 0.00000000 0.69746000 -0.04346600 -0.07107100 3.65690000 -0.08359800 0.16610000 0.23923000 0.23923000 -0.42844000 -0.42844000 1.15710000 0.07282700 0.07282700 -0.01230000 -0.01230000 -0.01230000 -0.03952900 -0.03952900 -0.03163200 0.01307400 0.10351000 -0.16548000 -0.16548000 -0.16548000 0.04897200 3.65690000 0.05337900 1.65530000 0.00000000 0.00000000 0.05473000 -0.07107100 -0.08359800 -0.02412000 -0.23815000 -0.19087000 0.23923000 0.23923000 0.23923000 -0.05388100 -0.05388100 -0.48899000 -0.17069000 -0.17069000 -0.17069000 -0.17069000 0.07282700 0.18117000 -0.01230000 -0.01230000 -0.03952900 -0.25114000 -0.25114000 -0.03163200 0.01740400 0.10351000 0.08710000 -0.16548000 -0.16548000 0.20457000 0.04897200 0.00010027 0.02890300 0.31883000 -0.52061000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.088 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.088 9.22564271 15.37959242 4.07462531 10.58192533 4.93260926 12.54484020 6.15677480 5.57447092 8.91933204 8.91461714 5.50925562 8.93619387 8.25204565 10.50010441 9.88238368 3.82951472 9.40217877 11.19810103 8.87552606 9.42390734 8.84911669 6.15677480 12.64204759 1.53406160 9.12515513 10.72859086 5.62152151 NA 11.00942276 1.53406160 13.20350663 12.55497465 7.71306202 9.74970119 11.16556560 9.90909728 2.93260926 3.02881665 -1.92522057 0.07464244 8.86660296 9.96527045 6.84941386 5.58242052 8.82072912 7.70398314 9.91382992 5.80254738 11.03625674 5.60600687 12.76156436 4.18315300 5.19356676 9.21317325 7.61415327 6.62921526 10.17331635 8.67917957 8.08725066 5.98151705 13.43783699 0.65955927 11.28757849 1.77505054 9.16738327 5.08585376 7.36924661 8.42777292 12.126410 10.554659 8.633047 12.023176 9.843638 10.228811 5.999439 8.975493 9.049837 10.615933 13.490698 11.823867 11.332751 7.691175 1.981524 7.598188 11.556552 11.5091241 3.8025448 8.4189219 9.6035687 8.0576198 10.2128436 8.2064830 7.9603223 10.8862016 9.6045447 4.1831530 8.3897759 8.7607416 12.8193024 10.3875091 8.3692470 9.1594347 8.6263344 7.5340577 8.7845717 10.3166093 11.5645996 12.2879583 10.2398473 8.9897586 0.3965979 10.3735250 8.4011342 7.7974339 9.8678231 6.7148706 11.0108960 9.8617126 7.3461591 13.9236892 10.3666602 10.5260949 12.4759724 11.3945805 8.9263752 2.6595821 TCGA-A2-A3XZ 46 0 NA 973 breast stage ia t1c n0 m0 2-10-2014 female 2009 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 239.28.0 NA NA 2 5 NA NA 2 6 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 2.503025e-07 11.4687524 6.0628643 6.3638194 11.5906244 0.4629946 9.2950514 NA 8.9756929 10.9835712 9.2077862 9.3818157 7.9786521 8.8691573 10.9172518 6.0175411 9.7797996 9.2855234 10.7675890 7.3302312 8.6626249 11.9771734 10.2157513 13.4400982 10.5035847 9.1538236 10.6610905 8.1371449 9.7843170 -1.5370054 1.4629423 8.0591422 11.4486166 12.5441030 7.9687641 17.6384161 12.4250351 9.0831724 7.0479146 4.4171504 5.9865133 8.0628654 6.4797609 6.8423302 12.6075311 -0.5370054 10.4699798 11.9007046 5.1068089 9.5893085 9.6736239 7.6503043 6.9305576 3.2178356 14.9774758 10.8616962 1.6328731 8.0886616 -1.5370054 4.2703047 9.6114291 9.6133344 8.9234083 9.8166507 9.6570937 9.9766801 2.7108781 10.8420600 10.9121011 6.8552697 7.0995772 9.5209441 8.6114291 14.4058793 8.4359036 9.9801297 10.1655581 8.8149957 3.6724027 5.8723437 9.1771980 7.7506648 10.5172176 NA 3.1633860 8.0232853 9.5510782 10.2966333 7.4769730 6.9386857 5.1494545 9.5609845 11.9145500 6.7667330 13.4840192 4.5714766 6.6428618 10.8630314 13.2029967 12.8850830 7.8996639 11.2138688 10.6187194 10.1441909 10.3739699 5.5609839 9.5864274 11.0263871 10.3017624 -1.5370054 10.2303093 8.7712914 1.4629423 3.7131569 8.8541961 10.3228755 9.9437426 8.2557429 14.9803449 11.4842795 8.8702201 7.9038216 3.3209323 14.3688565 9.7495103 12.8165818 11.5532303 9.7114731 10.3509347 7.7390771 11.0499400 0.25230000 0.49787000 0.49787000 -0.00249380 -0.00249380 0.00485790 0.50632000 -0.00166290 -0.00787140 -0.16688000 -0.16688000 -0.00166290 0.00750000 0.00750000 -0.05023500 -0.05023500 -0.05023500 0.00777830 -0.00041585 -0.00484610 -0.00290910 0.00000000 -0.16675000 3.65690000 3.65690000 -0.22810000 0.00471900 0.00471900 0.00221930 -0.24952000 -0.27129000 -0.26035000 -0.00249380 0.00485790 0.26388000 -0.01133500 -0.01133500 -0.00166290 -0.00544560 -0.00387790 0.25140000 0.25699000 -0.26901000 -0.00557300 -0.00557300 0.00000000 0.00000000 0.00750000 0.00750000 0.00277450 -0.05023500 -0.00418090 -0.00041585 -0.00041585 0.00069327 -0.00290910 0.00000000 0.01042400 -0.16675000 -0.01285100 -0.00167810 -0.22810000 0.00471900 0.00221930 -0.01102100 -0.13510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.167 -0.167 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.167 -0.167 0.000 0.000 0.000 10.4240404 12.0097264 6.4054666 9.5838383 6.7660942 12.7243863 7.7575734 1.0478873 9.8428723 7.6253436 NA 6.8160992 2.7848808 10.4880921 9.2352671 3.6724027 8.5004993 9.7792339 8.7758354 10.2224246 10.0107242 6.7344156 9.8536589 3.3209323 9.1282885 9.9766801 5.0628643 -1.5370054 13.9815134 5.3455951 12.3546413 13.4583663 6.9627989 9.2799360 8.2573685 10.2056829 5.4171504 2.2703196 -1.5370054 2.0479222 8.7297390 9.8970595 9.6234543 3.4629554 10.1136363 8.3068737 9.8531214 4.9223834 10.3459776 -1.5370054 9.4664703 4.1908756 3.9548012 10.0034244 6.5576107 7.9038216 9.8248962 8.2990028 10.7678742 -0.5370054 13.7061265 -0.5370054 11.1276220 NA 8.7814955 3.7848808 8.2751300 8.8444955 11.835903 7.861696 8.704936 17.638416 10.198932 11.089118 12.607531 8.596095 9.159607 10.044153 13.693911 9.504612 7.750665 7.632877 3.922388 10.955056 11.030671 11.3450223 4.8028033 8.9786524 9.4395166 8.1754797 11.2230715 9.0394367 9.2686964 10.5035847 6.9141639 1.9223882 10.1229483 7.9612830 12.2543189 10.6237693 7.8227021 10.0817968 8.0977635 8.5344149 8.9234083 10.4626002 10.8227020 10.5192515 10.5844860 7.9079674 0.4629946 9.7374297 6.4229545 9.3840496 10.2966333 4.3209323 11.2321705 9.5609845 7.0886611 13.4784982 9.5870737 9.7792339 12.2261648 10.9751991 9.7191612 2.9223882 TCGA-A2-A3Y0 57 0 NA 1167 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 239.28.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 0 0 0 0 3.671104e-06 8.621532e-07 12.5883097 NA 5.6879425 12.2461442 -0.6066936 9.0389804 -1.6064740 7.1212424 11.2694553 8.9574715 8.8841730 7.9070499 8.5954458 10.3244289 7.5781976 9.2372432 10.0639784 10.2919235 7.4540179 7.2166896 10.8906750 12.5311938 13.3428752 11.0965768 8.7984637 10.7225578 7.2881398 9.5135405 NA 2.3933338 6.8153871 8.8455634 12.2437043 5.0080341 11.2204662 11.7853711 9.1705773 6.6173235 3.5226082 9.0281332 8.2621447 7.8216822 7.9895120 6.0299475 -1.6064740 9.8032433 10.9612781 7.8951590 9.4681458 9.7219970 5.9168850 6.5328733 4.0937630 14.4243881 10.5299929 1.2006927 8.2309499 NA 4.6221397 8.8981409 10.1552888 9.0344708 9.5449729 8.6269417 10.5421164 2.7856342 10.2146975 11.0034242 6.5174426 7.7062052 1.2006927 9.6769893 14.3479274 7.8499023 9.6477602 9.3612688 9.8786483 3.2006770 -1.6064740 7.9574718 7.7640097 9.5806741 -0.6066936 3.2513101 7.6003367 10.7214360 7.7464686 4.6971010 8.4900374 5.8362650 7.5277483 12.0577694 2.7856342 13.5866934 4.4807821 5.7683617 11.0859376 14.5795718 12.1187948 6.3299595 11.6115826 10.8053626 9.9726379 10.4349812 2.2006927 10.0043469 11.6327714 8.3136749 1.3933064 10.0344706 9.4404461 6.5277491 4.5444916 9.0052689 9.5923810 10.1036980 9.2174852 14.1996200 10.5216387 8.3848437 6.8195864 1.7152345 11.0846294 10.2571212 12.1607824 12.6442126 9.1926038 10.3343697 4.6412512 10.1259644 0.256830 0.256830 -0.113810 0.018943 0.015727 0.129710 -0.116390 0.404440 -0.058058 -0.407050 0.949360 1.232800 0.567560 0.083487 -0.391960 0.155620 -0.388280 0.480450 0.202890 0.620790 -0.383690 -0.250790 -0.239960 -0.239960 -0.239960 0.168950 0.218370 0.218370 0.073115 -0.165610 0.256830 0.190560 0.024408 -0.421780 0.095653 -0.412230 -0.628930 0.404440 -0.058058 -0.015054 -0.111870 0.531860 0.030732 -0.362380 -0.464190 0.311610 -0.267330 -0.871270 -0.090361 -0.391960 -0.321000 0.480450 -0.382590 -0.407880 -0.662440 -0.383690 -0.250790 0.047552 -0.239960 -0.239960 0.031859 -0.382800 0.218370 0.224220 -0.645460 -0.238020 0.000 0.000 -0.321 -0.321 -0.383 -0.383 -0.702 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 0.506 0.885 0.000 0.000 0.000 0.000 0.000 -0.321 -0.321 -0.383 -0.383 -0.702 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 0.506 0.885 0.000 0.000 0.000 8.2293726 12.5251790 5.6027746 8.0989543 -0.2731688 11.1970496 2.4807821 1.7152345 10.6688646 10.2474112 2.4807821 6.0226785 6.2325265 11.1036981 10.3876755 5.4045489 3.6412454 8.9941642 7.4701374 10.9346608 9.5841406 6.5831460 11.7093207 1.6563591 8.0728020 10.5421164 1.7152345 NA 9.9867133 0.3933064 13.2673428 12.8583145 6.4966093 9.4411276 10.6682825 10.7337286 5.2006770 2.7152564 -1.6064740 -0.6066936 9.2904113 10.4486045 6.5226051 0.9782689 10.4080435 10.6006415 10.0907240 3.6412454 9.4627718 2.3933338 11.6415462 3.9479092 4.4156911 10.2871128 8.5922459 6.1812238 9.6364961 7.7618284 8.5669993 14.2965449 14.3576178 -0.6066936 11.3574824 NA 9.4253678 3.3002116 6.9555651 7.6554169 10.412548 10.237636 8.262145 11.220466 10.553193 10.857868 6.029948 8.309202 8.229373 10.260601 12.478712 11.684493 7.764010 6.664786 4.065745 8.071042 10.520994 10.634411 4.393320 9.118688 8.455368 8.467464 9.645721 7.657765 5.733173 11.096577 11.845306 NA 7.985779 9.779632 10.610371 10.817226 8.360548 11.080041 5.669446 6.789927 9.034471 10.385552 10.009871 10.124641 10.226608 7.327013 NA 10.280569 6.029948 7.429495 7.746469 4.733170 10.696001 7.527748 8.235672 14.654995 10.932238 10.398596 12.419673 11.745366 8.684493 1.563256 TCGA-A2-A4RW 49 0 NA 222 breast stage iiic t2 n3a m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 27 white not hispanic or latino 271.28.0 NA NA 4 4 NA NA 1 3 2 2 3 2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.363968e-06 5.840393e-07 11.6198047 7.3685431 7.0306738 11.7968960 2.2757818 10.0951671 NA 9.2005988 10.8914159 10.0887658 10.4325015 8.2729656 9.9268380 9.8663733 6.2299820 9.0815303 10.4742314 9.3986144 7.5331740 2.0831453 11.0130337 11.0485132 9.0555056 10.9753588 8.7575857 10.2299826 6.9622864 9.5681079 -0.7242777 0.8607642 8.3658985 11.7140584 12.7715165 6.9692737 13.3737361 13.3267403 10.5588747 5.5795664 1.5976980 6.9622864 8.1523031 7.7145780 7.8645007 12.3774338 1.2757818 9.5495820 14.1258266 5.4050700 9.2297645 10.6761321 7.4556955 8.9304225 1.2757818 14.2180314 9.4381776 4.5611856 9.9033202 NA 3.4457135 9.9968855 10.5052060 8.9322112 10.3875741 10.1916657 10.5571368 3.9762261 10.6681037 10.9697088 7.6377298 7.2124244 1.2757818 11.0398285 15.1770539 8.2199129 10.5858310 11.1271450 8.0991537 2.0831453 7.5611886 9.6033389 9.1306547 10.6729261 0.8607642 4.0306715 7.5795671 10.3405291 9.6200821 10.8451673 6.2065241 5.6851777 9.8226808 11.6554354 6.3201796 13.1352240 4.5237125 7.3472484 12.0260746 12.5754236 12.5705506 8.6333382 10.8346853 11.0290031 10.4421503 10.7741370 4.7993464 9.1290960 11.1515357 12.6029179 1.2757818 10.2630504 8.8110616 -0.7242777 4.4867980 9.8868111 10.4723885 9.4985812 9.0340096 14.4089687 9.9313171 9.5738488 9.3499278 2.7352189 14.7069574 8.5308148 13.5020480 12.8748855 10.3921303 9.6978511 8.0472755 10.7002413 0.00360760 0.51542000 1.03000000 0.01070300 0.01498900 0.00889200 0.47753000 0.98991000 0.01028500 -0.52502000 0.00694350 0.49459000 0.54101000 0.01126100 0.01084200 0.01084200 0.52801000 -0.00292170 0.00597000 -0.51424000 -0.00761010 2.35870000 -0.00968060 -0.00968060 0.00597000 -0.01477800 -0.01477800 -0.01477800 0.00930980 -0.51774000 0.50950000 -0.00097017 -0.52317000 -0.51918000 -0.38123000 -0.53399000 -0.53399000 -0.53124000 0.01028500 -0.51177000 0.53977000 -0.50639000 -0.52502000 0.00000000 0.00000000 0.00000000 0.00000000 -0.98449000 -0.48313000 -0.52348000 -0.52164000 -0.00292170 0.00861350 0.00861350 -0.52409000 -0.00761010 -0.53525000 0.01586600 -0.52675000 0.00597000 0.01768400 -0.01477800 -0.01477800 0.00930980 0.00708260 -0.51053000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 9.3960242 14.1058063 6.9339975 10.9160313 4.4457135 12.0985563 4.9196404 NA 8.9622867 10.0563261 1.2757818 9.5371644 3.7352189 9.8120335 9.9437848 6.0959645 9.1007451 9.6936389 9.0406580 9.3201805 9.7314731 7.9762261 10.7192480 2.7352189 6.7596019 10.5571368 5.2530665 0.2758414 11.1920390 3.9196452 11.5492906 12.1187259 8.6245144 10.1599568 8.4656109 9.6616488 7.0037068 -0.7242777 1.2757818 1.2757818 8.9464425 9.5343523 10.3908300 4.9762261 8.7823319 7.1149906 9.6519117 6.2065241 8.8812657 -0.7242777 11.1534539 3.9196452 5.5795664 9.5533294 5.2392605 4.8904953 9.3269952 7.9268380 7.6809277 4.0831453 13.1654804 0.2758414 10.1368732 NA 5.6156370 5.3843123 8.0571459 7.7796123 11.906270 6.597714 8.438178 13.373736 9.807655 10.351934 12.377434 13.258334 9.714578 10.570407 12.850971 10.781598 9.130655 8.908781 1.275782 7.561189 10.661649 11.840412 8.185679 9.122844 9.360595 7.347248 11.066843 7.547249 6.912410 10.975359 6.121277 3.083145 6.767639 7.708787 11.133767 10.366560 7.363249 8.272966 10.843742 6.158430 8.932211 10.695220 10.812034 10.597714 10.957903 8.435658 6.926838 9.402942 7.008259 6.475459 9.620082 7.194650 11.614244 9.822681 8.099154 13.785499 9.267308 9.627830 13.211780 11.861218 10.105509 2.083145 TCGA-A2-A4RX 67 0 NA 742 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA NA other specify yes 0 black or african american not hispanic or latino 271.28.0 NA NA 2 1 NA NA 2 5 2 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 11.9509357 6.7683259 7.0061230 11.1268947 -0.6663473 10.7997743 NA 10.6074934 11.4294245 10.0935861 9.1681689 7.1018822 8.8882866 10.4376413 5.4422236 9.0219483 10.9990338 10.6300406 9.4783561 5.6735479 11.9784555 11.9854223 12.7651955 10.0776907 10.2958708 10.2857111 6.7599627 11.0280558 5.1665869 0.3336527 9.6522407 13.7458046 13.1603457 8.6306141 12.4505291 9.8738260 10.2688629 5.9919095 1.6556266 6.7430894 8.4885158 8.1665879 9.0582118 6.6646151 NA 11.8626403 8.7849090 7.4935689 9.5355155 10.7065629 7.3223825 5.3109762 -0.6663473 13.5209502 11.1955602 0.3336527 8.7683259 0.3336527 5.6004839 9.7931295 9.8660538 9.0530866 10.3294651 10.0201984 11.4014683 0.9186915 9.2420906 10.9657843 5.6735479 7.3889799 3.5036286 6.9847500 16.8261222 8.6940841 10.9923557 11.0100958 8.0201983 3.9186629 NA 9.0985696 8.9612318 13.5700111 -0.6663473 5.5235212 7.4681238 10.3308773 10.7833624 7.0818903 6.9557499 4.7931312 8.8767297 11.7393712 NA 13.7414967 4.5036222 7.5284549 12.1691562 14.1304473 12.8014308 7.1084847 10.7163219 11.2148118 10.9988206 11.7176721 5.4211593 7.9224125 11.2330548 10.5474096 NA 10.7000201 9.5036228 1.3337100 4.2916109 10.3532886 11.4812208 9.7065630 9.3195398 14.1812936 10.4815388 9.8796277 7.2345645 6.5816254 11.6671328 10.0743219 14.3605671 12.8232950 10.2285157 9.8902039 8.4264551 9.9583197 -0.0011843 -0.0011843 0.0139110 0.0962340 0.0966700 -0.4617400 0.2878700 0.0984760 0.1241800 0.3646800 0.3646800 0.3402600 -0.4724700 -0.4724700 0.0462750 0.0462750 0.0462750 -0.4911100 -0.4692900 -0.2257600 0.2537100 -0.0008316 -0.2259400 -0.2126800 -0.2126800 0.0300290 0.0300290 0.0300290 0.2331800 -0.0533410 -0.0011843 -0.2419200 0.1007400 -0.4930300 -0.4617400 0.3312400 0.3312400 0.0984760 0.1241800 0.1064300 -0.4975700 -0.8031900 0.3429700 0.0560850 0.0560850 0.0530370 0.0303810 -0.4724700 -0.4801800 0.0462750 0.0462750 -0.4692900 -0.4692900 -0.4692900 -0.2257600 0.2537100 -0.0024926 0.0000000 -0.2259400 -0.2126800 0.0680910 0.0300290 0.0300290 0.2331800 0.0359470 0.0386300 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.226 -0.226 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.226 -0.226 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 9.3698715 14.7382740 6.0885847 10.6016549 5.6190990 11.8767297 6.9990337 8.3280515 8.0616185 9.3849068 0.3336527 9.3652612 7.0616185 9.7462677 9.8405013 3.2405891 9.8873271 10.5352092 8.7473260 9.0650170 8.8052309 8.4238101 12.3777504 1.3337100 9.2209185 11.4014683 4.4211627 NA 10.8988000 3.7260137 12.1010547 12.4173434 7.3671212 10.4071700 8.5649192 9.6109853 6.0479440 1.9186534 0.9186915 5.1916771 8.6283187 9.1378288 6.4105141 6.3449243 10.0164204 6.7599627 9.9584933 7.2102145 9.4051602 0.3336527 13.4628199 5.4211593 4.8882854 8.4154743 7.1811940 7.4264551 10.1862274 8.1216003 8.3365128 9.9757495 12.8604416 0.3336527 10.6323333 1.6556266 8.5601100 5.1410526 7.7807812 7.7130765 11.6571664 7.0061230 7.8215380 12.4505291 10.1220981 10.3273439 6.6646151 10.5595078 9.1281137 10.3449251 13.1185372 11.7073787 8.9612318 7.3052419 0.9186915 7.4158465 10.7714499 11.705475 7.013177 9.157065 8.511117 8.845451 10.592735 7.628319 6.911127 10.077691 10.720099 3.034145 7.673548 9.437209 13.188858 10.636337 9.023696 9.273277 10.229273 7.518573 9.053087 10.303084 12.003469 12.197110 11.003469 9.551656 8.506125 10.163032 10.154794 8.367121 10.783362 9.379457 11.218250 8.876730 8.115058 13.938367 9.981156 10.821035 13.343789 11.448416 9.764150 2.503629 TCGA-A2-A4RY 46 0 NA 648 breast stage iiic t3 n3a m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 18 white not hispanic or latino 271.28.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.824113e-07 3.040189e-08 11.096689 8.988327 6.642436 11.597778 3.064555 10.345606 NA 9.364040 11.852465 13.165302 10.000854 7.985528 9.029668 10.304091 6.988327 9.103804 10.844378 9.850544 8.776381 3.369411 12.410294 11.074803 12.423149 11.566985 9.644211 10.535999 5.649526 10.189596 1.562084 1.562084 8.516258 13.688175 13.161665 8.347787 13.320424 12.511767 10.578870 7.831968 5.064564 7.715192 8.921080 10.672763 9.254387 11.660314 4.186556 10.334652 12.475201 7.554528 9.623127 10.523994 8.448775 6.243886 -1.022977 13.954966 9.902654 5.531687 8.698199 2.147014 4.784457 10.042516 9.677539 9.153273 11.345879 9.862796 10.470455 3.147030 11.274302 11.057917 7.663600 7.229765 11.071837 10.546006 15.202721 8.611711 11.260188 10.972513 8.260188 2.677531 4.907838 9.359724 8.805236 12.475076 -0.022830 3.500662 7.577013 9.715192 11.052913 10.883990 6.308017 3.977097 10.049902 11.984828 1.977097 13.105416 5.871918 7.865843 13.268774 12.430627 12.957864 8.191419 10.512375 10.686614 10.796081 11.570024 4.835080 9.299028 11.760916 11.404150 -1.022977 10.579335 8.909314 1.784462 5.650655 9.624558 10.765818 10.096689 8.873432 14.642019 10.599609 9.148276 8.725292 3.977097 14.371395 10.288848 14.415437 13.277953 10.319730 10.161975 8.334651 10.431044 0.0616290 0.0616290 0.1592000 0.0031910 0.0026683 0.0063871 0.0027745 -0.1097200 -0.1097200 0.7571900 0.7571900 -0.0128510 0.0030522 -0.0022174 0.0011093 0.0011093 0.0011093 -0.0019399 -0.0019399 0.0045800 -0.0552290 0.0015255 -0.0349040 -0.0349040 -0.0349040 0.0075000 0.0075000 0.0075000 -0.0045695 0.0616290 0.0616290 -0.0133830 0.0031910 0.0063871 0.0019833 0.0027745 0.0027745 -0.1097200 -0.1097200 -0.1097200 0.0019418 -0.0075193 -0.0305400 0.0000000 0.0000000 0.0000000 0.0000000 0.0049969 0.0049969 0.0011093 0.0011093 -0.0019399 -0.0019399 -0.0019399 0.0045800 -0.0552290 0.0015255 -0.1094600 -0.0349040 -0.0349040 0.0079175 0.0075000 0.0075000 -0.0045695 -0.0011087 -0.1656100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7804235 13.1897480 7.8381866 11.0950673 4.6412975 11.2546776 5.4848954 0.9770967 9.0077668 10.0869302 -0.0228300 8.9756901 4.6209558 9.2613453 10.1147311 3.5620592 9.4538457 9.6810031 10.7948827 10.3737044 9.7046031 8.0672122 11.6105490 2.8839922 9.7311520 10.4704547 7.0431892 NA 10.7940833 5.7452831 12.7208821 12.0643967 7.8989405 9.9728668 8.4987000 9.2843004 6.2532235 1.7844621 0.5620836 4.8839922 9.0118987 9.3737043 9.2107193 6.8959630 9.9100451 6.3258271 9.8967078 6.3080168 9.8304092 0.5620836 12.0163614 3.4365350 5.7452831 9.2636112 5.9391866 7.4769454 9.9041368 8.2321283 8.9063579 0.5620836 13.6111165 2.5620592 10.6784060 NA 8.0539150 6.2717207 7.4365308 8.7319873 12.0486290 4.8597410 8.6245579 13.3204241 10.5055538 9.8366344 11.6603136 11.9421624 9.3488762 10.7007606 13.2378722 11.7886750 8.8052360 7.3694168 0.9770967 7.3737048 10.7976775 11.683164 6.663601 8.819450 9.440624 7.126847 10.665053 7.691345 8.184114 11.566985 6.452833 5.677539 7.862796 6.697310 12.087257 10.469954 8.093443 9.367269 11.036782 6.765002 9.153273 10.207720 11.311652 11.199291 10.737404 8.647756 -0.022830 9.845320 7.531689 8.321396 11.052913 5.919614 11.710539 10.049902 7.225027 14.169662 9.461922 10.268270 12.873621 11.283161 10.225620 1.977097 TCGA-A2-A4S0 77 0 NA 706 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes mucinous carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA 2 4 NA NA 1 4 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.080378e-08 6.080378e-08 12.23969145 4.48760211 8.19319465 10.91659562 0.06129234 10.72534061 1.06136147 9.60823227 11.78734304 11.56416964 10.32753872 7.78243674 9.75743601 8.96371282 8.03288161 8.78414536 11.72311593 9.80869169 7.55719256 0.64625484 11.87331453 9.19576417 13.26292574 11.91990170 9.61112257 10.53352091 3.23126343 10.09679684 -0.93870766 2.06132691 6.47072882 11.14946351 13.68006744 8.03000439 11.89106054 12.75678363 6.79604740 7.36967673 4.55318845 5.12742693 7.98615036 10.74125773 4.23126343 13.74224671 0.06129234 8.76524134 15.10579598 0.06129234 9.97683631 10.71283803 6.46221759 8.20854262 NA 16.54851769 10.42656668 2.52077424 7.20599651 -0.93870766 4.06133555 9.47072882 9.95008109 11.43365877 9.12473291 9.89343669 9.81622529 0.06129234 11.20949662 10.47337832 7.62358012 7.66496418 14.26215981 11.58954774 14.67452297 8.35333741 11.61232504 11.28352897 6.13815300 NA NA 8.85575367 8.51666486 9.46434991 0.06129234 3.81622081 7.96521979 9.54817284 10.82039375 12.96050590 3.76177460 3.14880398 10.00970505 11.60267646 1.64630093 13.03063440 7.49596612 7.80617194 12.88699229 10.04931234 12.72889293 8.64442053 10.88709165 10.34268829 10.40402922 11.08405237 5.01553325 8.64817744 11.30183105 12.63805836 NA 10.17898086 8.41006587 1.38327574 3.76565143 9.88947430 9.94245175 10.19640578 8.56118368 14.31607121 10.91620619 9.22750091 9.09338349 1.06136147 16.62232736 4.70519277 11.46381697 11.27140029 10.33338437 8.82786665 7.86546914 10.55562340 -0.00041585 -0.00041585 -0.00041585 -0.00368400 0.00277450 0.00027728 -0.00152430 0.00268340 0.00198680 -0.00201180 -0.00201180 -0.00201180 0.00000000 0.00000000 -0.00152430 -0.00152430 -0.00152430 0.00138680 0.00138680 0.00055459 0.00235810 0.00527490 -0.00307200 -0.00307200 -0.00307200 0.00124810 0.00124810 0.00124810 -0.00401620 -0.00041585 -0.00041585 0.00694350 -0.00368400 0.00027728 0.00027728 -0.00152430 -0.00152430 0.00889200 0.00268340 0.00198680 -0.00097017 -0.00097017 -0.00201180 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00000000 0.00000000 -0.00152430 0.00000000 0.00138680 -0.00674380 -0.00812090 0.00055459 0.00235810 -0.00192230 -0.00263220 0.00194180 -0.00307200 0.00097064 0.00124810 0.00124810 -0.00401620 0.00223830 -0.00290910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.40118758 11.65962300 7.20088880 9.89738823 1.49697358 11.49126758 1.06136147 NA 8.42766022 8.32343267 NA 5.71955037 1.06136147 9.77128312 9.43963269 0.64625484 6.25116235 9.43637716 13.23149762 10.30451184 10.47565309 7.50842073 10.95084178 3.96822902 10.01771400 9.81622529 2.76177460 NA 10.78158208 3.23126343 11.96050588 12.01970928 7.05002275 11.11526368 7.26100983 9.22372903 7.06133771 1.06136147 1.38327574 3.64630093 9.95918330 11.62143177 9.32812444 NA 10.74609959 7.08370589 10.24683274 4.58490239 9.29854789 NA 13.84908737 0.06129234 11.56018703 9.21210067 7.88158081 0.06129234 7.93785459 6.54515292 8.20088929 -0.93870766 13.04370757 1.38327574 10.78158208 NA 8.75656600 6.14879991 7.36967673 9.85818868 13.8833205 3.1488040 8.8426976 11.8910605 10.2493084 9.9637130 13.7422467 13.4954448 8.8095305 10.4933576 12.3933744 11.6605533 8.5166649 6.0837048 -0.9387077 7.6387668 10.8459726 11.05569125 7.84597296 9.05427627 9.03431753 8.13547946 10.51154384 6.80280455 9.15805295 11.91990170 7.23626395 7.21108522 8.67972323 6.02816024 11.07291452 9.38776727 8.10299714 9.29375878 10.36739946 2.86868677 11.43365877 9.98169071 11.75830534 9.48655369 10.48917441 9.39895976 NA 9.65305643 7.55615348 0.06129234 10.82039375 3.91932101 11.38896624 10.00970505 7.07256461 13.59970866 10.12877219 9.96597240 13.02558843 9.98540807 9.79095852 1.06136147 TCGA-A2-A4S1 66 0 NA 820 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes other specify yes 0 white not hispanic or latino 271.28.0 NA NA 2 1 NA NA 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.418381e-06 1.112456e-07 11.7229840 2.9368923 5.6738617 11.6419523 4.6249548 8.6187199 -0.2331081 8.7669711 10.7830828 10.8846140 8.8437867 7.2264026 8.7442509 10.4820749 5.2588242 9.4108272 6.2427035 11.0041809 8.7065502 4.5743256 12.1906121 11.6175485 3.0889048 9.0196363 8.6030213 10.3253917 5.9567955 9.7197122 7.0707521 NA 9.0753099 12.3887939 12.0914328 11.6237855 7.2747658 -0.2331081 14.3607705 4.8544346 0.7669767 9.0196363 8.9957898 7.9764244 9.4180227 -0.2331081 NA 12.7962582 5.4674099 3.2264006 9.7299392 0.7669767 9.8127305 7.4674107 0.7669767 16.0926848 11.9211562 3.2264006 8.8003939 NA 4.0888963 9.3311205 9.1742386 8.6124609 8.2866072 9.1001264 10.6813561 9.1245230 10.1657146 10.2598255 4.7669714 9.2161197 NA 2.3519392 14.2412473 6.6766243 9.3387237 8.8330602 8.0337578 5.6977071 1.3519110 7.6124609 8.4604579 11.5063297 -0.2331081 7.9666433 6.8859123 9.4233958 9.4760548 6.3519339 7.2099144 4.8962525 10.4393962 11.4936149 NA 13.7013990 1.7669767 6.2099153 10.7226208 12.4418253 12.2981087 10.2036825 11.8636861 9.9567955 9.7934944 10.1278181 3.2264006 9.3041893 11.7841273 8.2866072 2.0888879 11.1436390 8.3853564 NA 4.4257547 9.1376582 10.3090355 9.4198159 8.8491201 15.5768898 10.3603621 8.9368958 6.8222534 5.4393971 11.3509939 10.0956458 13.3983754 13.0896033 9.3631608 10.3339763 7.1678506 8.7269729 -0.0354480 -0.0354480 -0.0354480 -0.4422100 0.2183700 0.2036600 1.3028000 0.2382900 0.1802600 0.2626300 0.2626300 0.2590200 -0.3950800 -0.3942500 -0.0952520 -0.0749450 -0.0749450 -0.4305100 -0.4305100 -0.3371000 -0.1230400 -0.4392900 -0.3853300 -0.3853300 0.2532400 -0.1561800 -0.7587400 0.0084743 0.0207630 -0.0354480 -0.0354480 0.1832800 -0.4356100 0.2088600 0.1904100 0.2067100 0.2067100 0.2382900 0.1802600 -0.4960000 0.8508700 0.2114600 0.2626300 -0.4487800 -0.4487800 0.0871000 -0.0873140 -0.4019000 -0.3877200 -0.0952520 -0.1084900 -0.4305100 -0.4305100 -0.3975300 -0.3371000 -0.0976270 0.2434200 -0.0903610 -0.3853300 -0.3853300 -0.4365900 -0.1561800 0.0084743 0.0241270 0.1734700 0.0417410 -0.395 -0.395 0.000 0.000 -0.431 -0.431 -0.337 -0.119 -0.400 0.712 0.712 -0.385 -0.385 -0.421 -0.421 -0.156 0.000 0.000 0.000 0.000 0.000 0.170 0.000 0.149 0.149 -0.436 -0.436 0.209 0.209 0.207 0.207 0.238 0.238 0.219 0.219 0.253 0.253 -0.383 -0.383 0.000 -0.395 -0.395 0.000 0.000 -0.431 -0.431 -0.337 -0.119 -0.400 0.712 0.712 -0.385 -0.385 -0.421 -0.421 -0.156 0.000 0.000 0.000 0.000 0.000 0.170 0.000 0.149 0.149 -0.436 -0.436 0.209 0.209 0.207 0.207 0.238 0.238 0.219 0.219 0.253 0.253 -0.383 -0.383 0.000 8.8464557 15.4709826 -0.2331081 10.3206002 2.1891920 9.9666433 0.7669767 4.3519322 9.4126293 10.7774990 NA 9.1827127 4.0888963 10.8256392 9.4534715 2.3519392 8.9065224 9.1112669 7.1848238 10.0419314 9.7845868 6.3668834 12.9598802 4.0148998 3.5743316 10.6813561 1.7669767 NA 11.1387476 1.7669767 12.5147444 12.5966937 8.5711019 9.9629583 10.9312494 10.4144293 2.0888879 0.7669767 -0.2331081 NA 8.8517793 11.2648228 5.6977071 7.4180229 9.0963636 6.9957898 9.4358559 4.0148998 10.9078007 NA 11.2502829 -0.2331081 2.0888879 9.4497900 6.4491222 -0.2331081 11.3056449 11.2978649 3.2264006 2.9368923 12.6813561 1.3519110 11.3963276 NA 8.6218394 6.2905331 8.1506754 8.9192558 11.9471288 5.3215602 8.8330602 7.2747658 10.0325861 9.9580302 -0.2331081 8.0384340 8.7298668 9.4072159 12.4015551 10.7690828 8.4604579 7.9518465 -0.2331081 7.2983522 9.5855532 10.7204399 2.0888879 8.5871501 6.3215602 6.7556554 8.7620315 8.6434879 5.9567955 9.0196363 9.7823860 2.3519392 6.6617881 7.4409514 13.2166355 9.9167180 5.9764232 10.0911514 7.0053753 5.0523724 8.6124609 10.8735339 9.5727148 10.0787192 10.0029851 7.1420100 0.7669767 10.8221178 5.4565499 3.8544346 9.4760548 11.2553132 10.2036825 10.4393962 6.7370188 13.2706725 10.2222981 10.6648164 11.6006517 10.2578218 9.3080675 0.7669767 TCGA-A2-A4S2 62 0 NA 643 breast stage iiia t3 n2 m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 5 white not hispanic or latino 271.28.0 NA NA 3 2 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 1.946798e-07 11.65922579 7.03326991 7.68189125 11.64287902 1.29988936 9.89162485 NA 10.25469336 11.70164829 9.57882949 9.73370955 8.36384959 8.24477387 9.30104205 7.39583999 9.54499263 10.84680991 9.48875158 7.08127464 4.02238557 11.23124393 10.79736818 13.06304481 11.51326274 8.48974001 10.54213682 7.58161337 10.03055541 NA 2.14792533 8.17765972 10.95204339 12.56417272 6.72618000 12.88422033 12.78574476 9.17643249 6.93798932 3.56295062 6.03326881 8.07338432 10.56388885 7.15291351 12.86158527 -1.02209733 10.18683132 14.10646507 4.14790905 9.92751502 10.62003906 7.14791210 8.97234084 0.56296283 15.00564351 10.29483450 2.56293841 7.83596827 -1.02209733 3.50155379 9.81876526 9.74202963 9.95240201 11.29568262 10.22946980 10.33443934 2.78534130 11.17305190 11.02613360 8.14037887 8.63083244 4.43742085 11.42118995 14.90247514 8.35230964 11.34239563 10.57091152 9.15789637 -0.02195084 NA 9.33663866 8.95383530 11.84700275 NA -0.02195084 7.17765972 9.31560925 10.13911925 9.72282119 6.54023035 5.10726939 9.86292106 11.39636706 4.37030380 12.90465398 6.57044472 7.28632673 11.83946202 10.80413861 12.30188654 7.96098078 9.64598584 10.35953028 10.21937474 10.89087672 4.73287698 8.42919833 10.72450166 12.36047630 -1.02209733 10.16038174 8.67842690 1.78534130 3.56354865 9.57882949 10.49023397 9.01003318 9.24243007 14.35370560 10.12073269 9.59545480 9.12009451 1.78534130 15.25797873 9.51617632 12.94440268 12.58612664 10.10081540 9.80691722 7.60003926 11.19966210 -0.6112400 1.1956000 1.1974000 -0.0067813 -0.0067813 0.0000000 1.2680000 -0.0044312 0.0305910 0.6059300 0.6059300 0.6059300 -0.0348310 -0.0132250 -0.0245240 -0.0245240 -0.0245240 -0.0131270 0.0016642 -0.6870200 -0.0205490 -0.0383550 -0.0650450 -0.0650450 -0.0650450 0.5190900 0.5190900 0.5190900 0.5605500 -0.0783180 -0.6112400 0.0018030 -0.0067813 0.0000000 0.0061090 1.2680000 1.2680000 -0.0044312 0.0305910 0.0029133 -0.0235660 0.0073609 0.6059300 0.6053900 0.6053900 0.6053900 0.5798000 -0.0125760 -0.0349570 -0.0245240 -0.6342400 -0.0131270 -0.0288260 -0.0288260 -0.6052600 -0.0205490 -0.0359930 -0.0465830 -0.0650450 -0.0650450 -0.0107840 0.5190900 0.5190900 0.5344100 -0.0062286 -0.0817380 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 8.96667213 13.44959907 8.15041497 10.42351956 4.21409371 10.77199696 4.29991866 -0.02195084 8.52295182 9.17643249 -1.02209733 6.88223097 3.78534130 9.66273601 9.69480673 3.37030380 8.32671530 9.06013631 12.45258056 10.38472386 9.67499833 7.87280537 11.01964653 2.56293841 9.41052916 10.33443934 4.59269622 NA 10.70079489 2.29991866 11.35356987 11.69480682 8.21160703 9.47683651 11.69523538 9.75688585 3.78534130 2.29991866 1.29988936 4.73287698 9.28176802 9.61189071 10.22056600 4.78534130 8.44063292 7.23537477 10.05480290 6.46984040 9.00727456 NA 11.57743534 4.10726939 4.22591499 9.37692348 6.06788821 4.86063014 10.42403671 8.20920867 7.10210904 2.29991866 12.85229637 1.29988936 10.84449354 NA 7.52101932 5.29991499 7.49762354 8.14791210 12.452323 4.860630 7.887880 12.884220 9.472843 10.410007 12.861585 11.786750 8.798166 10.229470 13.305189 10.979044 8.953835 8.540230 1.562963 6.629039 10.281768 11.720297 6.977987 8.225915 8.664488 7.762622 10.727635 8.256437 5.989214 11.513263 6.949531 2.678433 6.890877 6.876921 10.285757 10.606433 8.324501 8.664488 12.836648 6.107269 9.952402 11.112735 11.886192 10.120733 10.952760 7.854504 -1.022097 9.028530 10.019338 5.835970 10.139119 7.387378 11.503508 9.862921 7.348675 12.329755 10.058139 9.569510 12.851528 11.028516 10.102755 2.437414 TCGA-A2-A4S3 59 0 NA 666 breast stage iib t2 n1a m0 2-10-2014 female 2012 NA NA infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 271.28.0 NA NA 4 5 NA NA 1 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.474004e-06 5.284165e-07 11.8657773 2.1054769 6.3534009 11.8788185 0.1054099 9.8291341 1.9128414 8.8299872 10.9700463 9.5781642 10.1896173 7.4274017 9.7574218 9.5106146 7.4183561 10.0640260 8.9509632 9.4564123 7.0302853 4.3534009 10.7188023 9.9735240 13.1646487 10.8740711 9.6997978 10.2250628 7.4891776 10.6280548 -0.8945901 -0.8945901 8.7146518 10.5296395 12.0417836 7.6677155 12.2691229 12.4507399 8.2113817 6.0479876 1.6904171 7.9096045 8.9063732 7.4453236 7.2450250 12.9534114 1.4273916 10.5902961 12.9726554 5.5649055 9.5341893 11.5254334 8.2952978 6.9063735 2.6904394 14.8471738 9.6810124 1.1054769 9.1208882 -0.8945901 3.4274050 9.1250639 10.4257097 9.4160860 9.4115349 9.8503070 9.9987747 2.9128223 10.7252347 10.7998311 3.0123720 6.5401017 3.7493305 10.1614335 14.2999223 8.1428555 10.7067798 11.0078483 7.6368544 0.1054099 6.3908757 8.8093768 8.4783385 9.7538308 -0.8945901 4.4977912 8.5042168 9.2666050 10.2996144 4.4273983 6.3051461 5.4274017 10.0093550 11.5233257 3.0123720 12.6926647 4.2347542 7.0302853 10.9240554 14.2711261 13.1473035 7.9819902 11.2841381 11.0074714 9.1661691 10.3124875 4.2754019 9.7357403 11.2697517 10.0640260 1.1054769 9.9850565 10.2087611 0.1054099 3.9045612 8.6523678 10.4143810 9.5233257 8.5669525 14.8041236 11.1929361 11.7972167 8.2035051 2.1054769 14.3952760 7.0884671 13.5184399 10.9387587 10.2533141 8.4408638 7.8435656 10.2044133 -0.49767000 0.05722600 0.02216400 0.23086000 0.01684500 -0.46195000 0.44833000 0.00000000 0.00000000 1.02740000 1.83840000 0.48389000 -0.48386000 0.02862200 0.02721600 0.02721600 0.48303000 0.07484000 0.01506800 -0.50877000 0.20289000 -0.48790000 0.00013863 -0.48081000 0.49614000 0.00346870 0.00346870 0.00346870 0.07225300 -0.47131000 -0.49767000 -0.05940400 -0.48743000 -0.49871000 -0.51928000 -0.51208000 -0.51208000 0.06222300 0.00000000 0.00000000 0.17242000 0.02834100 -0.50422000 -0.52205000 -0.52205000 -0.48176000 -0.48176000 0.02862200 0.03467700 0.02721600 -0.49089000 0.07484000 -0.43083000 0.06422500 0.04783600 0.07829400 -0.48050000 -0.47681000 -0.42538000 0.79181000 -0.53397000 -0.48932000 0.00346870 -0.50572000 0.01572700 0.09928800 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 8.4891776 12.6981638 6.8059128 9.3498370 5.1278396 11.4194899 2.5649147 NA 9.4750705 7.7636844 3.2753945 7.0818370 3.1929358 11.1132013 10.0018056 6.7420979 8.1742516 8.8214353 11.0228453 11.6786470 9.0402993 7.1769361 10.2928253 1.6904171 8.7884678 9.9987747 4.3149285 NA 11.9921224 0.1054099 11.7728066 12.3677149 6.5484166 9.9696593 9.0002910 10.7007307 6.8197193 2.8059115 1.6904171 1.9128414 10.3599114 10.1539601 9.7805481 2.2753945 9.5870204 9.2841382 10.2514054 6.0362110 11.0813212 NA 11.1233255 3.4977912 3.8059115 10.2595887 4.8648943 5.0827537 9.0168651 7.7565250 7.6446322 1.6904171 13.4173634 NA 10.5556535 NA 8.8802603 4.2347542 8.0712575 9.2166089 11.498630 7.846940 8.242464 12.269123 9.031769 11.077017 12.953411 9.777014 9.861195 11.119145 11.994026 10.009355 8.478338 8.376936 4.427398 8.469608 11.524380 10.3821793 5.0123631 8.1982304 9.1862908 10.6724786 9.3340274 7.6446322 8.6092988 10.8740711 7.9128283 2.2753945 8.3534009 9.9552380 11.9862047 9.9055642 8.0884665 9.9071817 9.7411914 6.3908757 9.4160860 9.6781735 11.3798514 9.6951244 10.1809524 7.8966364 0.1054099 8.9695511 6.4076094 6.4717955 10.2996144 6.4977912 10.3365804 10.0093550 7.5063528 12.8611954 10.1047686 10.0273141 12.4029627 10.4875568 9.0726994 0.1054099 TCGA-A7-A0CD 66 0 NA 1165 breast stage i t1 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 47.68.0 3 1 1 NA 2 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 11.4214725 3.5038321 7.1842148 11.6898516 -0.1966076 10.9580001 -0.7816528 10.3380201 11.8408255 7.6572220 9.9857873 6.7614621 9.1949947 9.1026009 7.3373712 8.9766538 10.5688172 9.0662709 6.7419927 -0.1966076 9.8108875 10.5159200 13.7916042 9.8837664 10.3506088 10.6294117 3.6446985 10.6966287 0.2184712 0.8033924 7.1372935 12.2989149 13.2271217 5.4663596 13.8859856 14.0525064 8.1462082 8.0639203 5.5493488 8.3269548 8.1550682 9.4363882 5.7262263 13.6107143 2.6107473 10.0091862 14.6799099 1.9188823 9.1169337 10.8748554 6.6404951 7.5847528 NA 13.1519113 8.9522931 1.6778465 8.1298224 -1.7814048 4.8183444 9.9188702 10.9012056 9.6541007 11.5253466 9.4064010 10.2366306 1.0258084 11.1069835 10.1649713 6.5847521 8.0887951 3.2628240 11.9743612 15.0296295 7.0773755 11.5740568 12.1476889 7.8943873 1.3883549 -1.7814048 7.5244924 10.6997254 11.5287592 -0.7816528 6.4278844 7.2845197 10.2767604 10.9979447 2.9733174 4.1726235 4.8183444 10.2682791 11.8028058 3.0257907 13.8089298 5.8766422 7.7614621 11.7444406 11.2675984 12.8221727 8.4639833 10.7324047 11.3060590 11.3632623 10.9940407 5.5582799 7.7361002 12.5624489 12.6110833 NA 10.0552698 9.1380388 -1.7814048 3.3927570 9.9791503 10.0505293 9.4980410 8.8395666 15.3023252 10.9380332 10.6171741 8.4910602 2.2184402 16.2685342 7.1372935 13.4372207 11.8986801 9.9322465 8.7082783 8.6362831 10.8056407 -0.052801 1.110100 1.207200 0.550180 0.550180 0.000000 0.593860 1.471400 -0.683050 0.573260 0.573260 0.562020 -0.065624 -0.053881 0.527480 0.527480 0.527480 0.542590 0.542590 -0.752030 -0.073877 -0.089302 1.436900 1.436900 1.436900 0.362150 0.362150 0.362150 0.475640 -0.180120 -0.052801 -0.049154 0.550180 -0.125940 0.000000 0.593860 0.593860 1.471400 -0.683050 -0.683050 -0.785520 -0.700730 0.567740 -0.078278 -0.078278 -0.078278 -0.078278 -0.053881 -0.067486 0.527480 0.527480 0.542590 0.542590 0.542590 -0.673430 -0.073877 -0.089302 -0.807080 -0.765610 1.436900 0.560450 0.268120 0.362150 0.475640 -0.084926 0.969250 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 7.1041270 12.0335135 6.4327490 9.0209469 0.2576141 10.8924020 -0.7816528 -1.7814048 7.7222563 7.3958503 NA 7.5244924 7.0290022 9.9808125 9.4651711 1.5403745 6.0128457 10.1613114 10.7358538 11.0982051 9.5906971 8.1813262 10.7517602 1.0258084 10.4910602 10.2366306 2.1253205 NA 10.8941670 3.3883549 13.1250393 11.5461234 7.8961501 11.1014555 8.8739611 9.4805253 3.8331431 1.2184092 0.8033924 1.0258084 9.0607808 9.8672373 10.4989112 4.6778634 6.1714631 6.8766422 9.8336003 9.0128463 10.3977175 NA 12.3567823 1.2184092 4.1010701 8.8942906 5.2205699 3.4278877 8.4532480 7.7787632 5.6530600 -0.7816528 14.0144194 -0.1966076 10.1439849 NA 9.3864758 5.3477117 8.0497375 9.1748066 13.229299 5.063921 8.304567 13.885986 9.662177 10.870827 13.610714 12.809544 9.381451 11.170808 12.761100 11.845394 10.699725 9.304567 1.025808 8.214198 11.690867 10.958211 8.184215 8.866788 9.166798 9.956455 10.046634 5.718277 9.126823 9.883766 7.009594 1.218409 4.773020 7.342991 11.390233 7.784484 8.468729 8.652016 13.748379 4.284522 9.654101 10.682210 11.079517 9.415647 10.648099 9.515920 NA 8.684344 6.038098 4.305890 10.997945 5.979982 10.099544 10.268279 6.979982 13.820926 9.791604 10.542892 12.513984 10.424834 9.670672 1.540375 TCGA-A7-A0CE 57 0 NA 1074 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 47.68.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.636462e-06 5.550446e-07 12.2154290 8.5725494 6.4838013 11.0825871 -1.5606428 9.3304316 -1.5606428 9.9080314 11.4681768 7.5712642 9.4280919 8.0467377 8.7317290 9.8849396 7.1398470 8.4023035 9.1267829 11.0125811 8.5751168 5.0393183 9.7675212 10.5308427 13.4073540 11.1105060 9.9877476 10.6140210 3.6873295 10.5262004 -1.5606428 -0.5606428 7.8572601 12.2311807 12.6523596 7.7635882 12.8757935 12.0477776 12.0306959 4.7248085 -1.5606428 7.3097719 8.8035419 9.2051078 6.5686904 7.8967883 0.4393572 11.6612965 10.2503805 8.3745722 10.1897626 10.6682260 7.5891545 4.1118326 0.4393572 13.7428174 7.9590433 0.4393572 6.8100947 1.2467729 4.2973895 9.3863137 10.6555469 9.3914204 9.5453159 10.2563909 10.4817507 NA 11.2858771 10.1197669 6.6730263 8.2191269 2.6873295 9.6944359 14.4432765 8.0568013 11.3317604 11.5659505 11.1213045 2.2467729 0.4393572 9.0642028 9.5367811 10.7522902 NA 3.1398460 7.3671850 10.7644316 10.5235514 4.5268701 4.5686888 8.2042787 8.2595860 12.0598563 1.0243906 13.0430916 4.9151384 6.3220507 11.2172790 13.6807202 12.5308427 8.0092632 11.3045606 11.4268490 10.9664175 10.9622340 4.8144479 8.5840654 11.7727025 7.3701442 NA 10.0135277 10.4492359 3.1942920 3.7336580 9.5459703 11.4919754 10.5165568 9.0224902 14.8398532 10.4113100 9.4776405 6.9590433 3.7248140 12.2011663 7.9997402 11.8733839 11.9531349 10.4834598 9.9292553 8.5348044 10.8569329 1.1380000 1.4767000 0.9013600 -0.5080200 0.5158200 0.0076799 0.0548450 0.6673900 0.5753200 0.0796330 0.0796330 0.1493900 -0.0276310 -0.0535720 -0.4639500 -0.4639500 -0.0106060 0.6255700 -0.0340460 0.4584200 -0.4919000 0.4449900 0.0000000 0.0000000 0.0975850 0.4841100 -0.0909840 -0.0909840 -0.0078458 0.0638370 0.0423490 -0.4268800 -0.5080200 -0.4813100 -1.0586000 0.0178900 -0.0485640 0.6673900 0.0473160 0.0938080 0.6146700 0.5409300 -1.2929000 0.0297880 0.0297880 -0.4662300 -0.4561500 -0.0535720 -0.0535720 -0.4639500 -0.5914300 0.6255700 -0.4671400 -0.4671400 -0.4624500 -0.5101600 -1.0325000 -0.4766700 0.0000000 0.0000000 0.0278200 -1.0369000 -0.0909840 -0.4367700 -0.2012100 -0.4745900 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.477 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.477 7.0504320 12.5849415 2.2467729 8.9580605 3.8676791 10.5341448 0.7613704 NA 9.1484911 9.7775866 6.4166878 7.6802224 3.0832644 10.6979733 9.4195469 1.8988275 5.0092621 10.8212206 12.3046573 9.3462979 9.5234649 7.0243696 13.3878202 1.6093295 8.3994091 10.4817507 4.9785663 -1.5606428 10.6494698 3.2973822 12.6675496 13.6722779 7.5162232 10.1250321 9.4878943 9.8111839 4.9472033 3.2973822 -0.5606428 4.4617774 9.3782517 9.7190179 8.1791881 7.5188923 9.7730883 8.2419236 11.2123404 6.1188871 10.5789587 2.3463045 11.7429027 2.1398624 9.6664214 9.8987672 5.8699429 5.1808759 8.9590436 8.7178567 7.2240422 4.4838029 13.4577379 NA 10.8755983 NA 8.7892415 4.2973895 8.6464215 5.9312599 9.879622 9.215840 8.587884 12.875794 10.429036 12.318799 7.896788 12.001173 9.571264 11.435351 13.367694 11.486702 9.536781 7.941244 1.609329 7.489256 10.652815 10.940249 5.334225 8.681391 8.606825 9.835477 9.536498 4.547931 5.259585 11.110506 9.960026 1.761328 7.867767 8.678886 12.623663 9.123279 8.001650 9.233011 10.068764 12.131914 9.391420 9.718437 11.685554 10.259985 10.781204 9.288030 -1.560643 8.837756 12.409141 6.322051 10.523551 5.687335 9.987251 8.259586 8.034254 13.802036 11.246360 10.755689 12.663409 10.164347 9.084165 4.648862 TCGA-A7-A0CG 78 0 NA 1043 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA mixed histology (please specify) no 0 white not hispanic or latino 47.68.0 8 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.112456e-07 10.8952959 9.2908796 6.9860252 11.3745089 2.4579882 9.8872470 1.6506267 9.9915975 11.7946556 7.7247764 9.3318731 8.2854457 9.1404827 10.2505476 7.2579648 9.7327837 10.1479876 9.6527466 7.8722218 5.5210005 9.6888678 9.5279189 12.6417136 10.7721682 10.0456333 10.6506347 7.2013820 10.5865364 0.6506727 4.9174222 9.5515016 12.6561716 12.7298695 7.7004834 12.5563038 13.1144145 8.9993628 6.2726858 2.8205670 6.5332783 8.6520429 11.1197677 7.6478146 13.0068115 0.9725456 10.8370585 12.6812157 7.9566962 8.9103780 10.7018437 10.2071408 5.4055227 NA 14.3231979 9.5886706 5.0935771 7.5515014 0.6506727 5.8404582 10.2238085 10.4648166 9.4992577 12.4560763 10.3870367 9.3528075 1.4580145 11.8127113 9.6084622 6.2726858 8.7045608 6.8003822 11.5968099 14.1952974 8.4014756 11.3068361 11.1031334 8.6660496 1.2356045 0.6506727 7.9103777 9.4835248 12.8281321 -0.3494192 5.6840585 6.7539227 9.9226812 11.4136396 5.2355969 7.2128767 4.6279161 10.7663286 11.9572661 1.9725456 13.7397541 4.5332768 6.9174210 12.0304192 11.6346971 12.8530647 7.5393783 10.0915039 10.7184052 10.4308218 11.2025833 5.2355969 8.7234374 12.3001155 9.1324342 NA 9.9250129 9.3545383 1.2356045 2.8333354 9.9882566 10.4740020 10.2542611 9.1172210 14.8094389 9.4827336 10.2033038 7.9770641 4.2052205 14.5372601 10.0642626 13.1608426 11.8961874 10.2204903 9.3648803 8.4221241 10.3610021 -0.0170910 0.4817600 0.9559700 -0.0027352 -0.0092068 -0.0130370 0.0274480 0.0057822 -0.0071970 0.0302610 0.0302610 -0.0328320 0.0098254 0.0269260 0.0135830 0.0135830 0.0027939 0.0524750 -0.0101430 -0.0126240 0.0188120 0.0285730 -0.3977800 -0.3977800 -0.3977800 0.0840140 0.0840140 0.0840140 0.0558930 -0.0170910 -0.0170910 -0.0210090 0.0063384 -0.0130370 -0.0185380 -0.0157900 -0.0157900 0.0057822 -0.0071970 0.0082863 0.0151190 0.0110420 0.0000000 0.0332180 0.0332180 0.0332180 0.0332180 0.0269260 0.0399940 0.0135830 0.0027939 0.0053675 0.0060603 -0.3838500 -0.0126240 0.0188120 0.0285730 -0.4119400 -0.3977800 -0.3977800 -0.4298900 0.0840140 0.0840140 0.0516220 -0.0123480 -0.3841800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9736895 12.6800945 5.3088450 9.8186800 5.3678987 10.4783744 1.9725456 0.9725456 8.4450504 8.3301147 -1.3492354 8.9252458 2.8985566 9.8955932 8.8180529 1.9725456 10.5552694 9.5916824 10.9736895 9.5109457 10.1010315 8.1324339 11.3190766 2.7380977 9.4953404 9.3528075 3.2356045 1.4580145 9.9921535 4.0429507 13.3114663 12.2717708 9.2944909 10.3195197 8.2598134 8.9255951 5.6164195 1.6506267 1.2356045 -0.3494192 8.2166886 8.9348806 11.1437396 6.6279147 7.6224370 4.6950306 9.8594787 5.8890403 9.1263681 -1.3492354 12.3205163 3.6048304 4.5086188 10.0500195 6.1558120 6.8105061 9.5370933 9.4038514 8.2926865 -0.3494192 14.2306282 1.9725456 10.1751764 NA 8.0831767 6.2726858 7.7824918 8.8305437 12.198782 5.431994 8.485106 12.556304 10.636832 11.526000 13.006812 12.359180 9.260986 11.020232 13.204024 9.532513 9.483525 8.917421 NA 6.835510 11.451535 11.220016 7.126368 9.177134 8.507060 7.828054 10.507706 7.695029 8.287259 10.772168 5.716725 2.235605 4.738098 6.739158 11.579338 11.078733 7.877047 8.140483 12.203184 8.014769 9.499258 10.529835 11.289749 9.298093 10.780884 9.680612 -1.349235 9.569468 7.883296 8.085263 11.413640 7.593149 10.599732 10.766329 7.492985 14.457839 10.028930 11.093837 12.327143 10.001574 9.834270 2.110063 TCGA-A7-A0CH 79 0 NA 1079 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 5 5 2 NA 2 1 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 8.343418e-08 10.7183325 2.5032724 7.4101571 10.7108438 NA 10.7254110 -0.1971037 10.0465956 12.0340477 10.2364120 9.8417455 7.7971797 8.6246006 8.2602073 9.0073976 9.1811214 10.6210092 9.6938507 6.4027392 2.6101803 10.4055254 9.6004881 13.2338670 11.4378645 9.3602903 10.4385447 3.2622527 11.0876507 1.1247252 3.1951428 7.4717118 11.8379693 12.6183029 6.0412320 12.8989652 13.2704321 9.3351824 6.6976446 1.9727662 5.6976432 8.2724684 9.9152660 7.5205032 14.0811671 1.1247252 11.1978251 13.9205102 7.0649216 9.4587419 10.7932851 8.2581538 7.9877017 NA 13.6455697 8.8362495 1.6101803 7.6451771 NA 3.8472253 10.2090316 10.2021045 10.6041307 12.4122362 10.4534296 9.3612473 1.1247252 11.6416366 9.7964727 6.7511932 8.9217678 6.9926506 11.7915113 14.4969123 8.8251945 11.8238065 11.6303677 10.4954420 2.5032724 2.7097097 8.6561363 8.9100436 10.9714986 NA 6.4681630 7.2037062 8.5119104 11.1451791 8.3593327 4.8028291 4.2946796 10.2891589 11.7511938 0.8028136 13.4654393 6.9677335 7.5939894 11.5990690 13.0596987 12.9375737 8.4752519 10.2663510 11.0216925 11.0387212 10.9889408 4.9727524 8.2581538 12.5124489 11.8024743 -0.1971037 10.0256214 8.8321137 -1.1972691 3.3270118 9.9833573 10.8746241 10.4525318 9.1157096 14.7402464 9.9557452 10.0412313 8.9034890 3.5577164 15.8072994 9.8776371 12.7568411 12.3489976 10.3783659 9.7164640 8.5273405 11.0915052 -6.7813e-03 1.4257e+00 1.4405e+00 9.4491e-03 -5.3709e-03 -4.8461e-03 1.4190e-02 -5.8841e-03 -1.3880e-02 2.0203e-02 2.0203e-02 1.3074e-02 3.0522e-03 1.0006e-02 -5.5444e-04 -5.5444e-04 -5.5444e-04 -7.4720e-03 -7.4720e-03 4.1632e-03 9.7064e-04 4.5800e-03 6.9725e-05 6.9725e-05 9.3098e-03 -8.8526e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -6.7813e-03 -6.7813e-03 -8.6588e-03 9.4491e-03 -4.8461e-03 -4.8461e-03 -5.2610e-03 -5.2610e-03 9.1705e-03 -1.3880e-02 -1.3880e-02 6.1090e-03 6.1090e-03 2.0203e-02 0.0000e+00 0.0000e+00 0.0000e+00 0.0000e+00 1.0006e-02 1.0006e-02 -1.7505e-03 -5.5444e-04 -7.4720e-03 -7.4720e-03 -7.4720e-03 -4.2554e-03 9.7064e-04 1.6632e-02 -7.7744e-01 6.9725e-05 6.9725e-05 8.4743e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -3.0418e-02 -1.0460e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.777 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.777 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3106214 13.3956923 6.0219949 9.4285354 2.8902910 10.4189159 0.8028136 2.8028343 8.2519751 8.5759658 NA 7.4248784 2.7097097 10.4138514 9.2936774 -1.1972691 6.3952839 9.2069037 10.7975335 10.0316452 9.5665867 8.2143376 10.1515547 0.7212414 9.6545755 9.3612473 3.4466797 NA 10.2866423 2.9727478 12.7246675 11.7553858 7.4858213 10.3444072 7.7772408 9.0183596 4.3263863 1.3878037 1.6101803 8.0951480 9.0696130 9.8396871 10.7508287 2.5032724 7.7865042 5.9525735 10.5192173 6.4466830 9.4430716 -0.1971037 13.1244729 2.6101803 4.2946796 9.7551892 5.9030672 0.8028136 9.0086199 7.8635222 4.1603797 1.6101803 13.7220158 -0.1971037 10.0116706 -0.1971037 8.9589096 3.3263935 8.3400450 8.8417455 13.259031 5.142675 8.711219 12.898965 10.279573 11.417306 14.081167 12.940378 8.946210 11.022600 13.887801 8.814054 8.910044 9.879642 -1.197269 7.561050 11.905950 10.8856409 7.9321096 9.1962170 9.2343241 8.3458585 10.3534435 5.7335631 6.7036932 11.4378645 5.7801053 4.4175353 5.9321084 5.2322770 11.0171457 10.3244270 8.4928246 8.2986817 13.3951084 3.0507455 10.6041307 10.4216709 11.2246284 8.9139623 10.5489209 9.3224629 -1.1972691 9.1968605 7.3224627 2.7097097 11.1451791 7.9474850 10.2780533 10.2891589 7.2540375 13.4809315 10.0707836 10.6273876 12.9520974 9.8390001 9.8916148 0.8028136 TCGA-A7-A0CJ 57 0 NA 931 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 47.68.0 3 1 1 NA 1 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.455874e-07 2.503025e-07 11.4673956 0.5941663 7.1058959 11.4067222 -0.4058337 9.2235003 NA 9.5563167 11.7125982 11.2404774 9.7202029 7.0494707 9.2407024 9.7098377 8.4567811 9.5821183 10.0072427 9.4987784 6.2451952 4.3755052 10.7346540 9.1019384 13.3323416 10.9864611 8.6095589 10.3982748 5.1019400 10.6234310 NA 2.5010314 6.4767867 10.5148688 13.6801141 5.8229621 11.8046629 12.2632503 7.6629218 7.6521358 4.4767899 3.7640701 8.6123440 11.4443306 6.4206929 13.4111274 NA 8.8876154 14.1733123 2.2945766 9.2389012 11.5633504 2.7640701 3.6385373 -1.4058337 13.9394533 9.6220498 NA 7.0162088 NA 3.6385373 9.2780157 9.5620905 8.9239401 11.5302295 9.0919957 9.6137344 -0.4058337 10.9317656 9.9064595 6.7234261 7.2701009 10.9222576 12.6920113 14.1910614 4.9794035 11.3180179 10.1381422 8.1525642 0.5941663 NA 8.6921757 9.2919801 10.9729804 NA 2.5010314 6.6165121 10.4625805 10.0759432 5.7938153 4.7438919 4.6816067 9.8661903 11.9467390 0.9160944 12.7643035 6.1639998 6.5941439 11.2577019 12.5255276 13.0859968 6.8841632 11.0528067 11.6609057 11.0719020 10.9947564 3.4014939 9.1996233 13.2464286 11.2756018 NA 9.6696230 9.6330628 0.5941663 3.8051583 9.3481961 10.7179418 9.7343345 9.7117869 14.6062008 10.4923673 9.8426643 8.8910600 2.9160753 15.5738815 9.7783993 11.4423754 10.6865706 9.8096768 9.3288533 7.0494707 10.2036503 -0.104870 0.413790 0.413790 -0.716400 0.927360 -0.118020 1.410800 0.312740 -0.160770 0.415800 0.415800 1.417400 -0.074277 0.458370 0.423350 0.407610 0.407610 -0.694860 -0.094724 -0.667530 0.471180 -0.667720 -0.656960 -0.656400 0.986590 0.369860 -0.128880 -0.128880 1.159900 0.497010 -0.104870 0.283060 -0.674440 -0.688340 0.300950 0.385180 -0.177900 0.312740 -0.160770 -0.144770 -0.685790 0.431760 -0.652020 -0.633680 -0.637570 -0.072274 -0.113360 -0.974730 -1.279700 0.385180 -0.676920 -0.666700 -0.094724 -0.094724 -0.668640 0.450540 -0.091023 -0.613470 -0.660680 -0.656400 1.457000 0.803640 -0.128880 1.120100 -0.118870 -0.148110 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.561 -0.561 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.263 -0.123 0.313 0.168 -0.130 -0.130 0.670 1.322 -0.551 0.000 -0.537 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.561 -0.561 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.263 -0.123 0.313 0.168 -0.130 -0.130 0.670 1.322 -0.551 0.000 -0.537 7.4919893 11.5927342 7.3853068 7.7864363 2.6816067 10.7935093 0.1791288 -1.4058337 9.0391587 7.9160717 -1.4058337 6.8821796 4.6385373 10.6845870 9.4325599 5.4143216 6.9115562 8.5642497 8.4317717 10.3109632 8.3461228 7.8396964 10.6514586 0.5941663 8.3237646 9.6137344 2.0535632 NA 10.5764244 3.7640701 12.5735689 12.3752985 6.5010346 9.9138159 9.8673566 9.6289427 0.5941663 2.5010314 -0.4058337 7.8157310 8.9800062 9.6275667 10.2963164 -0.4058337 7.8163834 6.6109525 9.0556233 6.0119965 10.2496744 -0.4058337 10.2384507 3.4521210 4.8795440 9.5227139 6.6190065 2.4014939 8.7552755 7.6895410 4.7234275 -0.4058337 13.1250377 0.5941663 10.4317717 NA 9.5592065 3.7640701 6.8933513 8.2014741 13.374017 5.037088 8.363981 11.804663 9.538124 10.278892 13.411127 12.074682 8.480648 10.219853 12.307638 11.474301 9.291980 9.892779 7.524881 8.359016 10.180514 10.8274639 6.6548394 8.2823939 9.7046270 8.2612553 10.2172159 5.1940555 3.8420737 10.9864611 6.3885598 -1.4058337 6.2945840 8.6123024 10.4771688 9.1049080 8.0879990 10.0673421 11.0177850 3.7640701 8.9239401 10.8142197 10.0072427 9.1477730 10.4111274 8.2701009 0.1791288 8.4988987 5.6468193 2.5941424 10.0759432 6.2088528 10.7712518 9.8661903 7.0245967 13.3576570 11.1504103 9.6018718 12.0942387 11.9705405 9.3075303 1.5941663 TCGA-A7-A0D9 37 0 NA 1139 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 61.60.0 3 1 4 2 3 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 11.6248364 7.1831619 8.4560393 11.1372263 -0.2803346 10.5302092 0.3046279 10.1953710 12.2322545 8.5140532 10.6291556 7.2894933 9.4373139 11.4170395 7.1332655 8.6694641 9.7823583 9.8044458 7.8795091 2.0415584 10.8798241 10.3661962 15.2121323 10.6994199 9.7252621 10.9315258 3.6738391 10.8007881 0.7196654 2.7196435 9.7182279 11.4738987 13.3974122 8.3634935 12.3694550 13.3399146 9.8630207 6.7364452 2.0415584 7.6592167 8.8044460 6.9484560 8.3688936 12.7387069 -0.2803346 8.7735635 14.3172245 5.0234195 9.2391066 11.1149039 8.7640316 5.3343466 0.3046279 11.9885990 7.8097501 1.3046279 7.1459026 2.1790651 4.3045987 10.5438007 9.8864282 9.3814155 10.1215836 10.3598824 9.8104116 2.0415584 12.1857140 10.2942311 6.4678305 6.1290274 6.6083805 10.1872431 15.1273202 8.6906060 11.9593852 11.6078100 9.9840802 1.7196216 7.5745057 8.6518521 9.2144930 11.3592043 1.0415934 5.6022817 6.9045130 10.6095216 11.1664623 5.3634935 4.2114873 4.5009996 10.5022263 11.6345831 6.5269921 13.7923563 5.6854216 7.8719225 12.3168753 13.3530869 13.1021264 8.6220126 9.5961545 11.3248855 10.5549458 11.3603344 5.3778491 8.1994176 11.1783005 11.4021933 -1.2803346 10.1469503 9.7971208 1.3046279 3.5305952 10.0771896 9.7019181 10.7213975 9.5791722 15.0657010 10.2104883 10.3172246 8.9508585 3.3045987 16.0316252 7.2510193 11.9031178 11.3389405 9.9014109 8.9057516 8.2875937 9.9479693 0.00305220 0.00305220 0.00305220 -0.00549140 -0.01900800 -0.00572120 -0.01064600 -0.00802440 -0.00802440 3.65690000 -0.77431000 3.19280000 0.00612280 0.00416320 -0.00830050 -0.01601700 -0.01601700 0.00000000 0.00000000 -0.00843850 0.00527490 3.65690000 -0.70899000 -0.74133000 0.07988000 0.03848900 0.03848900 0.03848900 3.65690000 0.00305220 0.00305220 -0.01087800 0.00346870 -0.00484610 -0.01106000 -0.01064600 -0.01064600 -0.00802440 -0.00802440 -0.00802440 0.75522000 0.73910000 -0.83638000 -0.78975000 -0.78975000 -0.77795000 -0.77795000 0.00416320 0.00416320 -0.00830050 -0.01601700 0.00000000 0.00000000 0.00000000 -0.00843850 0.00555290 -0.81570000 0.02706800 -0.76723000 0.04075100 0.00432110 0.04649100 0.03848900 0.00027728 -0.00574930 0.03637000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 -0.767 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.836 -0.836 -0.778 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 -0.767 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.836 -0.836 -0.778 -0.778 0.000 8.5666949 13.1770184 6.0683656 9.6174829 1.3046279 11.1046910 0.7196654 NA 8.7308648 8.2333651 -1.2803346 7.7299979 2.8895709 10.4522290 9.5116143 1.3046279 7.0683656 9.1718788 8.0256994 8.9945981 8.8990242 7.4845087 10.9186963 0.3046279 9.0313858 9.8104116 3.3634935 -0.2803346 10.7894229 3.6738391 12.8464226 12.4462814 7.9436389 10.4021933 6.9193103 9.3426045 5.0594894 1.3046279 -1.2803346 0.7196654 9.0760895 10.0102324 9.9657843 5.3195493 8.8064504 6.8333797 10.6280302 5.4611029 8.9793809 NA 9.1385442 2.9675560 4.0771917 10.1881291 7.2430816 2.4200781 8.1646525 7.8437590 7.0004080 5.5269921 13.6283585 NA 10.7711864 -1.2803346 8.6068582 4.7857284 8.2607342 8.9734850 14.341871 7.392063 8.850208 12.369455 10.390316 10.484095 12.738707 17.220884 8.995762 10.683256 12.241606 11.103072 9.214493 8.399118 4.077192 6.796454 15.375657 10.569824 5.348994 9.002726 9.489475 8.032520 9.948029 4.243197 10.149044 10.699420 6.145902 2.041558 4.363494 7.257050 11.845858 9.782358 9.168786 8.625025 11.072233 3.673839 9.381416 9.711868 12.006773 9.585371 10.407451 9.535821 4.111958 8.714260 7.153431 4.304599 11.166462 7.644450 10.214993 10.502226 6.938806 13.794072 10.789087 10.121584 12.076777 10.389851 9.507540 1.889551 TCGA-A7-A0DA 62 0 NA 1085 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 3.364958e-06 5.897349e-07 11.858181800 2.228172218 6.057443774 12.014094243 -1.579059544 11.150015695 0.005759269 8.859611811 11.232395263 7.009534171 9.810988799 9.353034538 9.024446293 10.941684057 6.625390319 7.888425456 9.620492207 10.010471040 9.195606957 -1.579059544 9.874604877 11.718166034 13.072432185 10.023054733 9.721744326 10.302698549 3.778376811 11.544294641 5.386604044 3.064675949 7.459738978 12.825695309 13.267926150 6.932572650 12.298008108 11.357825783 10.017475589 7.110817355 4.093247468 9.541057691 8.737101291 9.382992920 7.832330545 4.795860437 NA 11.992098455 10.111254368 9.058350322 9.367550605 11.196635873 9.471348844 6.345632334 -0.579275081 14.195374007 9.059255760 4.630271494 10.321309294 -1.579059544 3.121264120 9.783311605 10.280742821 9.274129315 10.009534451 10.048809571 10.583525853 6.093245355 11.678355019 10.819029136 4.121255830 6.639988916 8.192309091 6.107319617 15.457562272 7.834130325 11.012108400 10.533585150 9.567388580 2.005795193 2.420832692 9.645424448 9.357457874 10.018406899 -0.579275081 7.231391125 7.392363794 9.193134511 11.070749621 5.079032437 5.813137285 4.912673814 10.379010065 11.313552372 1.590721770 13.617268300 4.327708918 7.351556779 11.485394221 14.493831675 12.600029197 8.091476114 11.047669592 10.247765557 9.947460882 11.283457200 3.944380591 7.965784285 12.612418898 9.920167482 NA 11.127315876 9.583211231 3.327716103 3.813822227 10.196841593 11.232595887 10.630273223 8.624167806 15.193752943 10.741620433 10.682914724 7.459738978 4.064675949 11.510601349 8.809913436 12.641349337 11.662207236 9.415173239 9.811526261 8.318665270 10.192804449 1.070800 0.916220 1.244700 0.184720 0.169260 -0.263820 -0.691150 0.168050 0.184500 -0.272960 -0.272960 1.644700 0.987010 -0.268170 -0.252610 0.153380 0.153380 -0.236920 -0.236920 1.108000 0.707570 0.767340 -0.291540 -0.291540 0.230240 0.537490 0.521880 0.474260 0.152330 -0.246030 1.070800 -0.766890 -0.270210 0.473750 -0.724230 -0.741680 -0.724110 -0.275830 0.190410 -0.271640 -0.288100 0.391310 -0.271520 0.978530 -0.252730 -0.275950 -0.279290 -0.268170 -0.748980 -0.734680 0.470840 -0.236920 -0.045364 -0.047666 0.354630 -0.274160 -0.421120 -0.279770 -0.291540 -0.287030 -0.721280 -0.298270 0.034959 0.707760 0.505330 0.183440 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 -0.398 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 -0.398 8.0501762 14.4494166 5.3750151 10.2846189 1.4511715 11.6697851 2.0057952 8.1840323 8.9706046 8.7337028 7.4009597 9.8434470 3.9443806 9.8894439 9.5558878 0.4208327 5.9286143 10.6905309 9.3065163 8.8365617 9.8012971 7.6829145 11.3704642 2.2281722 9.5584515 10.5835259 4.7958604 NA 10.3894867 1.2281722 12.9367044 12.2964732 7.2568701 10.1761248 9.5155573 9.5273828 4.3034593 2.0057952 0.7427823 -1.5790595 7.9384893 9.3426607 8.9226569 4.7246012 9.5260146 6.0057817 10.9904381 6.0501773 9.6699333 6.8088368 12.5145675 3.0646759 5.0355315 10.2573673 5.8308891 2.2281722 8.9384893 7.6056951 4.8802496 10.6457260 13.0509163 1.7427392 10.6529409 NA 10.1177874 6.5857272 8.1055686 9.3239485 13.641992 6.644821 7.773967 12.298008 10.823299 10.841570 4.795860 12.825230 8.565478 10.359297 13.744543 11.582896 9.357458 8.766225 -1.579060 8.447343 11.118005 10.950494 4.778372 9.328462 9.949762 8.015145 10.108257 5.872031 7.437628 10.023055 7.898578 7.366264 8.396668 7.340637 12.780638 10.219697 7.838673 7.946341 8.341173 4.035527 9.274129 10.070525 11.706078 11.279384 10.244585 9.432746 -1.579060 10.082843 6.892495 4.253709 11.070750 8.553962 11.286553 10.379010 7.598389 14.509318 10.126020 10.897819 12.741761 10.791507 9.827025 -1.579060 TCGA-A7-A0DB 56 0 NA 1007 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 47.68.0 5 2 3 NA 2 1 3 3 2 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 3.059253e-07 10.8334403 7.9537105 6.2307986 11.5114743 1.2010692 10.3516444 NA 9.7891409 11.8212707 9.0836939 9.2289569 8.0062576 8.9061071 8.7363262 8.0816549 9.0672996 10.4592243 9.2224935 7.2990825 2.7860108 10.2454450 9.4161794 13.2897839 11.1049327 9.2472653 10.1099438 4.1079389 10.6928973 0.6160753 4.3440118 8.7847605 12.0126932 12.7037998 7.2234187 13.0371670 12.4997817 10.1114437 6.2085446 1.2010692 6.5990827 8.1337577 9.4670565 7.5199704 12.7959975 0.6160753 11.0381531 13.5111429 8.4910698 9.5821900 10.5597021 9.8939569 7.1474695 NA 14.3047930 12.2118447 3.3709733 8.1079415 -1.3838305 3.0755155 9.6515748 9.9675798 10.1312955 10.0062573 10.1716362 9.2920455 2.0755326 11.6287129 10.0811445 7.0714152 8.7620205 1.2010692 11.2765300 14.1535495 7.2023648 11.3941655 10.8808242 8.1591200 3.0083972 4.2010535 8.5394159 8.7709067 12.2137918 NA 5.8449078 6.8968591 9.5804293 9.8758317 4.2599428 5.9470045 5.8352571 10.3579766 11.6698446 0.2010065 14.2939732 4.8828729 6.8968591 11.9471453 12.8763464 12.5777189 8.4833672 10.2076107 10.8866757 10.5663855 10.7950644 4.6821800 8.4250526 12.1469824 10.7369742 -1.3838305 10.1029234 8.6047730 0.9380223 3.9018613 9.3139247 10.8598575 10.0836939 9.3524904 14.6796309 9.8273683 9.6556930 8.2990830 2.8640177 15.3571208 9.1591203 12.8385060 13.6538069 10.3953974 9.4402517 8.4568665 10.9523327 -0.0182120 1.3420000 1.3420000 0.5781000 0.5781000 -0.0262920 0.6411500 -0.0225950 -0.0225950 -0.0157300 -0.0157300 -0.0157300 0.0000000 0.0023697 -0.0101840 -0.0101840 -0.0101840 -0.0150420 -0.0150420 -0.0111860 0.6597800 0.0135040 0.0089037 0.0089037 0.0089037 0.6188200 0.6755000 0.6304500 0.6967200 0.0249810 -0.0182120 -0.0052494 0.5781000 -0.0262920 -0.0279690 0.6411500 0.6411500 -0.0225950 -0.0225950 -0.0157300 0.6544200 0.6451600 -0.0157300 0.3007600 0.3007600 0.3007600 0.3007600 0.0023697 0.0023697 -0.0091308 -0.0101840 -0.0150420 -0.0150420 -0.0150420 -0.0177180 0.6597800 0.0135040 -0.6776500 0.0089037 0.0089037 -0.0037279 0.6188200 0.6304500 0.7385400 -0.0096690 -0.6553700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 8.3491038 12.9062513 8.1435654 9.9637098 3.1396496 10.2071432 -0.3838305 0.9380223 8.9049546 8.6019305 NA 7.8377724 3.9014945 10.1054346 9.0662687 1.2010692 8.4740693 9.2876295 11.3071776 10.6143262 9.7280848 7.7935077 10.5750036 2.7035437 9.8059130 9.2920455 2.7860108 NA 10.3495275 2.5229848 13.0592262 12.1774957 7.7035513 10.1706772 7.3130562 9.6167927 3.3165223 2.7860108 0.6160753 8.3925214 9.7447272 9.6433034 11.1438097 6.8497078 7.8230538 6.7193765 10.3647006 5.9648168 9.3801307 -1.3838305 11.9743275 2.0755326 3.6160871 10.1050933 7.8329311 1.9380223 9.2832000 8.2160013 6.2743008 2.3165223 13.8994662 0.9380223 10.0887792 NA 7.8991768 4.4489802 7.7008967 9.3676325 12.514406 6.259945 8.133758 13.037167 9.986231 11.251353 12.795997 12.430771 9.034995 10.556035 13.276586 9.364281 8.770907 9.610442 -1.383831 6.735029 11.626966 11.060586 6.309575 8.826760 8.925565 7.955938 10.385439 5.947004 5.461578 11.104933 6.593369 2.786011 3.973639 6.431728 10.114439 10.557136 7.564456 8.423443 12.442736 4.170678 10.131295 10.637415 10.693238 9.519970 10.801893 9.340602 NA 9.350857 8.239695 4.201054 9.875832 6.924428 9.738658 10.357977 7.470957 14.141242 10.144543 10.802512 12.432772 10.476011 9.756918 2.316522 TCGA-A7-A13D 46 0 NA 965 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 96.50.0 4 4 4 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.807741e-06 5.284165e-07 11.8519666 1.5076678 6.2549039 12.5189978 -1.2997379 9.3094945 -0.2997379 9.1442952 11.4633206 7.8975327 9.2501004 7.4076748 9.3002285 10.0103604 6.2625591 8.3002285 9.9333361 9.5989171 8.3369403 -1.2997379 10.7542417 11.9265774 13.2785705 9.6932542 8.7677501 10.1669021 1.0222613 10.7647217 6.6191797 0.2852246 6.7930726 11.0641767 12.0386343 8.2277926 13.3656517 11.7786334 10.9197868 5.6661004 2.7877877 8.5395194 8.8889046 9.8645941 8.4602040 7.4849509 1.0222613 12.8627857 10.1422225 9.8513323 9.3585273 10.1102370 8.1139437 4.8702414 1.5076678 13.2315997 7.1181687 2.5076678 9.3806753 -1.2997379 4.3441752 9.0401659 10.3214518 9.1689398 9.4742791 8.8538678 10.1453306 1.2852838 11.2128093 11.6556024 4.6072060 7.4111220 -0.2997379 9.0786106 15.7297647 8.3074609 10.8169846 10.5951335 10.7737879 3.6072119 1.0222613 8.6266118 8.9799264 10.1070523 1.0222613 5.7447101 7.9741111 9.6034444 9.8107991 8.5890590 3.7447101 5.3296726 9.5180988 11.9036637 4.1921705 13.5211429 3.4007565 7.1307682 12.0315126 13.5046989 12.9259751 7.7528837 10.5020241 10.5383378 10.0977872 10.5359715 5.2852764 8.5660491 11.6277234 9.5752970 NA 11.0029546 9.3656516 2.2852838 3.4013164 9.4775711 8.7864520 10.1976686 9.5951334 15.2692516 10.8586099 9.6939619 8.2606486 3.3441752 12.0849646 6.8702402 13.1036607 12.8014707 10.1365067 10.0340301 8.1139437 10.7804004 0.388990 1.621800 1.409800 -0.173480 0.501340 -0.199500 1.581600 0.408780 -0.195410 -0.585300 -0.146050 2.619700 1.292300 -0.228100 -0.228590 -0.233490 -0.187350 0.243890 -0.200870 0.221450 -0.152080 -0.247430 -0.134840 1.222500 -0.193150 -0.353050 1.507200 0.747270 0.668080 0.067375 0.388990 -0.077745 -0.167900 -0.339980 0.222530 -0.472680 -0.364880 0.408780 -0.158600 -0.210570 0.692040 0.716970 -0.661550 -0.176120 -0.155790 -0.182440 -0.212180 0.438510 0.246380 -0.213540 -0.185210 0.243890 -0.203610 -0.233980 -0.160640 -0.164720 -0.195250 -0.199250 -0.165740 -0.168280 -0.183950 -0.467220 0.827250 0.683100 0.630070 0.026233 0.955 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.163 -0.163 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.000 0.955 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.163 -0.163 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.000 7.1961703 13.5657107 5.4007565 9.0278684 2.7003065 10.4510227 -1.2997379 5.9194831 9.4552033 8.3223676 7.1139432 10.3113405 7.1349437 10.9351331 8.8727432 3.4552023 4.2549039 11.3892216 5.5582983 10.2006597 8.7920950 7.6011824 12.1247445 0.5682267 8.2179853 10.1453306 0.7003509 -1.2997379 10.2620810 3.5582921 12.3436083 13.0794233 7.3076462 9.6057027 9.7983479 10.5879172 3.9857190 3.2238704 1.0222613 -0.2997379 7.8576626 9.4154198 8.2510624 6.3868161 9.7094795 6.1921685 9.5068653 5.9194831 10.5403068 3.4552023 11.4963553 2.9482457 4.7664043 10.1682423 7.1398971 1.7003065 10.8823997 7.9339355 3.9097731 3.6072119 13.0430849 1.5076678 11.0273069 NA 9.8620775 4.6545100 8.3094945 8.0446116 11.255830 9.801635 7.455203 13.365652 9.628094 11.086987 7.484951 10.376714 8.572221 10.691838 13.232611 11.705589 8.979926 8.816660 1.022261 7.689001 11.376714 10.9212986 5.2701701 8.7717780 8.6369537 8.4816755 9.7162604 3.4552023 7.7254556 9.6932542 10.5614026 -0.2997379 7.9949366 8.4920158 13.1582096 10.3894401 6.6855884 9.4367176 8.6530572 2.9482457 9.1689398 9.5882979 11.5218904 11.5004067 10.3364871 8.8244369 NA 8.9625516 6.4076757 2.7877877 9.8107991 7.5332059 10.1556430 9.5180988 7.7087446 13.7689261 10.3731830 9.6861577 14.2839274 11.0963853 9.0677304 -1.2997379 TCGA-A7-A13E 62 1 614 326 breast stage iib t2 n1 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 96.50.0 4 4 4 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.112456e-06 3.615481e-07 12.7515701 3.5797715 7.2236243 11.0167767 NA 10.7163928 NA 9.5045803 11.9284960 10.1496234 9.4780454 8.6147632 8.8770117 9.2318445 9.0531836 7.9246979 10.3569057 10.2359373 8.1211413 5.0012303 10.7954742 11.2764871 12.1679471 11.3774294 9.7532666 10.3178602 3.8598801 10.6005495 8.4359711 2.7724136 9.5289692 11.9876425 11.5781286 6.8545617 13.0550670 13.0401506 9.0875626 5.9016948 2.4728516 9.7589660 8.4745857 9.1818040 9.0954677 1.3573831 NA 13.1629178 4.7496952 11.6815560 9.6841271 10.9126036 8.2662684 2.6793112 -1.2276920 13.7491140 8.0807520 1.5797594 9.4606633 NA 3.2318471 8.6210357 10.8835486 9.3018435 9.4297314 9.4658998 10.4243616 -1.2276920 11.8565570 12.4492515 5.1818023 6.2153563 3.2959728 9.6603951 14.2420230 7.3909454 11.8442105 10.9677851 10.3930909 2.2318317 -0.2275231 9.1625819 9.6108290 11.0988424 0.7723924 3.9423362 6.8058354 11.7345860 10.7149275 4.5003304 5.8704461 5.9818663 10.1211411 11.4630657 0.3573831 13.3601905 4.7496952 6.2481458 11.4379709 13.3714540 12.3365624 7.9964147 10.7899173 11.8732395 11.6244430 11.2640155 3.9818618 8.3907984 11.5185073 5.8058367 4.9423362 9.5749293 9.6838049 3.6303938 2.9503378 9.8545621 10.7853866 10.3246017 9.2318445 14.2278365 10.7327769 9.8997625 6.7836400 3.3573690 11.4641564 9.3935490 13.4024525 10.9297599 9.4457219 9.3270017 7.2277401 10.6471062 0.55886000 0.90070000 0.90070000 0.01505000 -0.00387790 -0.00498440 0.41212000 0.02906500 0.03016900 0.82236000 0.82236000 0.88686000 2.33880000 -0.48439000 -0.48963000 -0.48963000 2.93690000 0.83962000 -0.48554000 -0.00221680 -0.49638000 -0.49819000 0.00000000 0.00000000 0.00000000 0.41999000 0.41028000 -0.50795000 0.44088000 0.03679400 -0.47628000 -0.48502000 0.00213950 -0.53068000 -0.01340200 -0.50546000 -0.50546000 0.02906500 0.03016900 0.03016900 0.46443000 0.49431000 -1.07300000 0.78987000 0.78987000 -0.02219500 1.85010000 -0.48439000 -0.48439000 -0.48963000 -0.49621000 0.83962000 -1.29290000 -0.49361000 -0.47955000 -0.48722000 -0.49819000 0.00027728 -0.01037000 0.00000000 0.86553000 -0.49454000 -0.49099000 0.41949000 0.44524000 -0.50978000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 6.6853025 12.8517310 1.0943712 8.1604301 3.9818618 10.3540843 1.0943712 NA 8.7695923 6.6303938 6.3573761 8.6288385 6.5603160 9.7674734 9.5668289 2.5797594 5.3422703 10.9363771 5.6793027 8.5909953 8.8481059 7.3834373 10.5314689 -0.4619585 10.1272133 10.4243616 2.2318317 NA 9.6897850 2.4728516 12.4958606 12.7650858 5.9119648 10.0949045 9.1934258 12.9099645 1.0943712 1.3573831 NA 1.0943712 11.4232403 9.1711565 8.3460602 3.1647380 8.6780557 6.1211418 10.5201863 9.9554279 9.8337841 0.3573831 14.2885438 1.9423456 3.7724136 10.5819922 8.6248177 4.6053047 7.6702583 7.4341912 4.9818663 12.1744923 13.2453576 -0.2275231 11.1255597 NA 9.0601252 4.2642662 7.4797722 7.6272814 13.759527 7.020340 8.790613 13.055067 10.258987 11.351021 1.357383 11.092085 10.706491 11.708867 13.301538 12.632918 9.610829 7.822262 3.772414 8.443069 11.191320 10.7291521 6.1299650 8.0485376 8.9572884 8.8651700 11.3006399 4.2959728 4.5003304 11.3774294 5.5668273 -0.2275231 10.1855119 8.8162605 13.8711853 9.0566586 7.6365992 8.1711568 8.3797431 4.2318471 9.3018435 9.9246978 12.5486403 13.8648810 10.5011837 9.1507077 NA 9.2554325 7.5501288 4.9016972 10.7149275 6.5989621 12.2504393 10.1211411 7.4763169 13.4304570 10.5214443 9.6979673 12.0824576 11.0069310 9.6005495 -0.2275231 TCGA-A7-A13F 44 0 NA 387 breast stage iiia t3 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 96.50.0 3 1 1 3 2 4 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 2.781139e-08 12.0271788 4.9692564 7.0057828 11.1774596 NA 9.6957804 -0.3161688 9.6344101 11.2232555 8.1453336 9.9967371 6.9506410 7.5664971 9.7152108 7.4815161 8.4337235 9.2499082 10.0414063 6.2384430 NA 8.7539752 10.5805651 14.7712135 7.7145217 9.8829131 10.8262805 2.6838536 10.5622731 1.2687937 1.0057593 7.1595878 11.6177293 12.0741576 10.5684064 13.4663918 13.5295403 7.7364222 5.5907457 2.0057952 8.2671814 7.6639935 9.4395764 8.8810708 12.5625758 1.0057593 10.9585236 13.6378688 3.0761657 9.9500551 10.5948716 6.9876347 7.3877580 0.2687937 13.3382251 8.8956816 1.2687937 7.6838543 NA 4.8933088 9.9311884 10.0990678 10.1636346 10.9186717 9.1027610 9.9790491 6.2537095 11.1777097 10.0958948 4.7923765 8.7553166 2.7713151 10.8981734 15.4996628 7.6491189 11.4723687 11.4705323 9.4701238 1.4911861 4.9317823 7.9317817 7.9198686 11.5393068 NA 5.3842951 6.8736791 10.4248998 10.8890366 3.7282471 5.0588922 5.0414051 9.9186717 11.5365788 6.3912127 14.0921176 6.1916495 6.7172775 11.9210642 12.4949279 12.6299381 8.9830623 10.3642138 10.8198841 10.0783170 10.4307884 4.9506410 8.3738522 11.2962620 11.6269185 -0.3161688 10.2398812 9.2201014 0.6838312 2.1432955 8.9727202 10.9576498 9.5664972 9.0370011 15.0231302 10.2336390 9.8926982 7.7364222 0.6838312 16.0286876 9.6696961 13.5495392 12.2470505 10.1580672 9.0825980 8.3040743 10.2188476 0.218990 0.896060 1.002600 0.205090 0.226630 -0.158600 0.230550 0.206410 -0.611140 0.619740 0.619740 0.629160 -0.235170 -0.202730 -0.190990 -0.215770 -0.215770 0.165200 0.209930 -0.613350 -0.576670 0.578980 0.529410 0.529410 0.529410 0.097252 0.097252 0.097252 3.656900 -0.724560 0.218990 -0.182820 0.205090 -0.259980 -0.158600 0.230550 0.230550 0.206410 -0.611140 -0.653990 0.220310 0.207570 0.611720 -0.205850 -0.205850 -0.205850 -0.238150 -0.202730 -0.236060 -0.227660 -0.215770 0.209930 0.209930 0.209930 -0.613350 -0.654770 0.592880 -0.250830 -0.285130 0.529410 -0.214380 0.097252 0.097252 -0.250790 0.202740 0.150040 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 8.1309376 12.8016597 5.7282471 9.4244783 2.2760202 10.9961700 0.2687937 -1.3161688 8.6725388 6.9222585 NA 7.5869831 5.9784748 10.4968337 9.1330029 4.7713151 6.8437251 9.2659964 9.0125293 10.8653171 10.2420453 7.4684888 10.7589991 3.3842985 8.8027952 9.9790491 2.5907457 -0.3161688 10.4092206 2.1432955 12.5923407 12.2986791 7.5695503 9.7145213 6.5603711 9.5832112 5.7713178 1.2687937 NA 1.4911861 8.9796233 9.5088131 10.5100054 5.0932432 8.6604613 6.7818869 9.8575313 6.3059067 9.9447738 NA 8.9956027 1.0057593 3.5907457 9.6407603 8.7661230 1.6838761 8.7404918 7.3059058 5.1101210 1.2687937 13.6370958 1.4911861 10.4766446 NA 8.8525264 5.3420640 7.5786723 7.9246457 12.0914925 7.1595878 8.7526325 13.4663918 9.2846964 11.2000467 12.5625758 12.0557670 9.1876799 10.6725389 12.6307605 10.9570671 7.9198686 7.0588933 0.2687937 7.6056951 13.2732128 10.6431318 6.6263690 8.5771557 7.7391366 10.5344318 9.5876532 5.4253217 7.5907450 7.7145217 5.7818869 2.4912118 4.9506410 8.3749521 10.5187203 8.0588939 7.4815161 8.3527391 12.5937473 3.2074087 10.1636346 9.3411728 9.7296139 9.6234334 10.8893420 9.1247233 NA 9.1760579 6.2069460 3.8537761 10.8890366 5.5907457 9.8393051 9.9186717 7.0331135 13.5135770 9.6467502 10.1747051 12.7955605 10.8515860 8.8786110 -0.3161688 TCGA-A7-A13G 79 0 NA 718 breast stage iia t2 n0 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.668684e-07 10.5442304 5.2658307 7.8790974 11.5206436 -0.8940538 11.6094114 7.9992599 10.3016382 11.8994601 10.8163343 9.9985012 7.4301389 9.1185829 8.7757291 8.3586240 9.6334354 11.6586274 9.0263112 6.0188478 -0.8940538 11.1460768 10.0296572 13.2047718 10.9935598 9.3317684 10.3524020 2.1934248 11.0828715 -1.8937857 4.3154141 6.6605479 12.4214617 12.2342749 5.9577080 13.0339215 13.0352168 8.3251269 7.9977423 4.4458061 5.6984158 8.2696078 12.4978061 7.2733769 12.9947016 4.5653900 11.1467617 13.3794626 8.7040108 9.9650388 11.2130119 9.0105930 8.9028092 -0.8940538 14.9995226 7.0248216 1.2759010 7.9639393 NA 3.2352369 10.3416735 10.1513767 11.5858649 11.4168551 10.3774214 9.7516169 1.1059462 10.9897471 9.9863071 7.2683492 9.1787609 0.4279279 12.0700284 14.4300861 9.0019728 11.9886969 11.5391526 9.4568975 2.6909311 7.1448774 8.7632768 8.7443942 12.3302616 -1.8937857 5.8608461 7.4142971 7.9778638 10.9828589 10.4761008 4.6295198 4.2758861 10.4480331 11.9689830 2.2758712 13.4052021 6.2658288 7.9261370 11.5478651 11.8654305 13.2001598 8.0068254 10.0903768 10.6045582 10.5489070 11.2761964 5.5068368 8.5968092 11.6169697 10.4040209 -0.8940538 10.1496693 8.9809398 2.4982764 4.0606181 10.1414448 10.3701077 10.2774479 8.9514485 15.1178626 10.1841092 9.9072625 9.4679022 1.9133011 16.7519122 5.3347756 12.0562409 10.6866880 10.2920725 9.5912845 8.6097841 11.5679327 -0.00743570 1.72690000 1.75240000 0.00277450 -0.00346270 0.00430210 -0.00055444 -0.00235530 -0.00235530 -0.00415460 -0.00415460 -0.00415460 0.00000000 0.00000000 0.00346870 0.00346870 0.00346870 -0.00138580 -0.00138580 0.00444110 0.00240510 -0.00180140 -0.00526100 -0.00526100 -0.00526100 -0.00221680 -0.00221680 -0.00221680 0.00319100 -0.00290910 -0.00743570 0.00277450 0.00277450 0.00430210 0.00260040 -0.00055444 -0.00055444 -0.00235530 -0.00235530 -0.00235530 -0.93585000 -0.91883000 0.01544700 -0.00290910 -0.00290910 -0.00290910 -0.00290910 0.00000000 0.02146300 0.00346870 0.00346870 -0.00138580 -0.00138580 -0.00138580 0.00444110 0.00240510 -0.00180140 -0.90510000 -0.00526100 -0.00526100 0.00763920 -0.00221680 -0.00221680 0.00319100 0.01265500 0.00791750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 0.699 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 0.699 0.000 0.000 0.000 0.000 0.000 7.8029260 12.3165536 3.1059630 9.4091684 4.0601512 10.5707593 0.9133394 -0.3090019 7.3154114 6.7641696 NA 6.5792993 2.0128547 10.4632354 9.4826265 0.9133394 6.2455090 9.0359565 9.9623839 10.3529958 9.7972612 8.5121633 9.9253392 2.9133203 9.6734391 9.7516169 1.6909087 NA 9.9627728 3.0128547 12.6494131 12.1367117 6.7169827 9.9376614 6.6984158 8.9490942 5.9639388 2.1934248 0.6909087 3.6909199 8.9954622 9.4744648 10.9145204 2.8608436 8.5144896 6.1774215 10.2777606 5.2557047 9.3739155 NA 13.3607655 3.5978172 4.5816947 8.6270286 6.4372777 0.1059462 9.0396489 6.5937989 3.4278877 -1.8937857 13.8114557 -0.8940538 10.1108810 0.4279279 8.6480228 4.4982764 7.8625146 9.3867291 13.6924569 3.9886029 8.5551071 13.0339215 10.6405044 11.2791670 12.9947016 13.4755557 9.5524524 10.8176253 13.2443901 7.5633389 8.7443942 8.8055308 0.1059462 7.5025629 11.5305183 11.032810 8.117185 9.131098 8.938057 8.752517 10.030444 5.847426 8.020343 10.993560 5.295782 8.526971 3.463505 5.912734 9.700283 10.304710 8.552948 8.416571 13.488245 2.913320 11.585865 10.274004 12.183191 8.902809 10.712132 9.571525 -1.893786 9.617632 7.319719 2.193425 10.982859 6.325127 10.847590 10.448033 8.344470 13.926709 10.563852 10.500421 13.039280 9.594803 10.532747 1.565402 TCGA-A7-A13H 61 0 NA 899 breast stage iib t2 n1a mx 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 227.33.0 NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 2.781139e-08 10.4920243 7.5579369 7.1169854 11.6252550 2.8654438 10.0524446 -0.5267846 9.2246727 12.1043057 9.5705024 9.8001198 7.8761406 9.3349910 10.1371314 6.9809233 9.1205870 11.1203622 9.3458035 7.6177870 5.3679476 11.8554825 10.5402269 10.0272378 11.8390410 8.7769094 10.3338277 7.2346795 10.1508395 0.4731115 1.2804813 8.2949028 11.9674843 12.4637645 7.4417955 13.5809996 13.4707933 10.2095306 6.6279468 3.3311033 6.9966904 8.5405632 10.1451119 8.2095304 12.8344556 3.0580913 11.0850756 13.8038705 8.0315496 9.3321120 10.5773997 8.2380001 6.6126798 NA 14.2314196 13.0413859 0.7950188 8.8295807 -1.5269924 4.9488625 9.8018036 9.9376744 9.1543670 11.2551030 10.1539277 10.0702500 5.4273246 11.1585345 10.9781958 7.5658858 8.1115645 -1.5269924 11.7421092 14.5330223 8.2052791 10.6069131 10.8182566 8.6971302 2.3800090 6.2869107 9.2642915 8.5894725 11.0806902 NA 5.1455552 7.8284799 9.4653589 9.4171086 5.0878404 6.9609692 5.4156438 9.9009652 11.8099141 3.9649808 13.0003002 5.4504096 7.2246732 12.2609292 12.0708321 12.6996161 8.9559367 10.3766340 10.6174683 10.7152012 11.3471495 5.2145950 9.1796248 11.8659827 11.7106374 -1.5269924 10.4892405 8.7387439 1.6430712 4.4843573 9.3115447 10.5270545 10.3056231 8.9649816 14.5731544 10.3971989 9.4850546 8.4475432 5.0878404 15.1576444 10.2820928 13.4875415 12.7973092 10.2988825 10.5099891 7.9468344 11.5213226 0.00917050 0.83962000 0.84041000 0.42385000 -0.00705760 -0.00069303 -0.00387790 -0.00290910 -0.00290910 0.00763920 0.00763920 0.00763920 0.00374650 0.00073819 0.01377200 0.01377200 -0.44405000 -0.01050800 -0.01050800 -0.00138580 0.00663030 0.00847430 0.46553000 0.01430400 0.01430400 0.01880300 0.01880300 0.01880300 0.03369000 0.00917050 0.00917050 0.00430210 0.01656500 -0.00069303 -0.00972740 -0.00387790 -0.00387790 -0.00290910 -0.00290910 -0.00290910 -0.00512270 -0.00512270 0.01349200 0.00263570 0.00263570 0.00263570 0.00263570 -0.87984000 0.01126100 0.01377200 -0.44405000 -0.01050800 -0.01050800 -0.43637000 -0.00138580 0.00663030 -0.44307000 -0.42963000 -0.44028000 0.01430400 0.01826500 0.03031000 0.01880300 0.02035400 -0.03473100 -0.41630000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.840 0.840 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.840 0.840 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4461084 13.0941503 8.2196429 10.1587534 5.9959842 11.3448414 1.6430712 1.7950604 8.9067142 8.2296850 1.0581086 7.4561219 3.6024094 9.5512795 10.0093759 1.4731115 9.3837715 9.5338246 10.9266565 10.2788726 10.2162548 7.7700447 11.0855365 2.7950604 10.1070321 10.0702500 5.5065512 -1.5269924 11.1264216 4.1169885 11.8936153 12.1173229 8.1822126 10.0924316 9.1259736 9.2740286 4.8481672 2.9966961 -0.5267846 6.0655852 9.4396341 9.6660379 10.0730415 5.5392178 8.8675379 6.3679459 9.8611460 5.1596292 9.4717191 0.4731115 11.4121568 2.7950604 4.6228777 9.3879921 6.5444297 6.0429835 10.0425096 9.4808568 8.6983362 NA 13.2487904 0.4731115 10.3732407 -1.5269924 7.7043498 5.7210554 7.4127079 8.7871454 13.220567 5.027716 8.621605 13.581000 10.482607 10.399054 12.834456 12.666500 8.411238 10.531120 13.135129 10.676783 8.589473 9.004510 1.473112 7.283701 11.246680 11.4351209 6.3800194 8.9376745 8.4996522 7.5868706 10.9538356 7.9305097 7.0915137 11.8390410 7.0391823 0.7950188 8.2724105 6.8238907 10.6511710 10.8006813 7.9927650 9.0238755 11.6141182 7.0277180 9.1543670 10.5718188 11.2491504 10.2929086 10.6798378 8.0142253 NA 9.4324352 6.3426916 7.4532682 9.4171086 5.4156438 11.2380334 9.9009652 7.2869735 13.5120905 10.0069451 10.0557411 12.6063512 11.4253239 10.0453552 1.2804813 TCGA-A7-A26E 71 0 NA 954 breast stage iiia t3 n1a mx 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 2 2 NA NA 1 3 3 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.503025e-07 10.5044365 7.5541898 7.6696667 11.1993492 1.2565276 10.8274188 1.5460178 10.8104582 12.2448781 10.0298313 9.8626057 8.6267122 8.7150295 8.2286912 8.2751728 9.6052371 10.8514556 9.7407724 7.7483619 1.0865800 10.2917663 8.7783275 12.5245960 10.6957627 9.2197261 10.8157799 3.9692242 11.1555302 0.6715651 1.0865800 8.6363687 11.9704682 12.4893962 8.4130135 13.0019499 14.0162585 9.0802299 5.9320730 4.0407785 6.6179655 8.7835516 9.7245672 7.9210548 13.4902285 NA 9.8098183 13.4816160 8.0552510 9.0609985 11.4013088 7.9919707 8.7213949 NA 13.5532343 7.7828737 3.7304443 8.3404314 -1.9132162 4.9814006 10.7585673 11.2830324 11.1977196 13.2935220 11.3768909 9.1800016 1.4084945 12.6444664 10.0509249 6.4529067 8.3404314 1.7870145 12.2413230 13.9090552 9.2030580 11.8995635 12.0132506 8.5673743 2.0865800 5.6022846 8.9738047 9.6948388 13.1720149 -1.9132162 5.3057517 6.5253752 10.1227576 11.6944922 5.3627083 6.1580461 4.0865800 11.0676160 11.9742806 0.6715651 14.0070066 6.2312423 7.6659001 12.5416543 12.8393827 13.5866789 8.3475036 10.2363310 11.3753059 11.2997125 11.8273134 5.6564392 8.2068219 12.6623596 10.8212936 NA 10.3650334 9.0349511 -1.9132162 3.6460705 9.6101460 10.5426816 10.6262275 9.1996750 15.0140379 9.6076935 10.4085121 9.1839576 3.3345111 15.5926126 9.8967539 13.6267423 11.7226421 10.7891896 9.3422027 8.6724855 10.4247409 -0.24588000 0.43831000 0.41806000 0.04223800 -0.00076094 -0.01736600 0.06072400 0.05316700 -0.00512060 0.02331400 0.02331400 0.05018100 -0.25691000 -0.25691000 -0.66457000 -0.66457000 -0.65968000 0.13576000 0.02882300 -0.06671900 -0.09029300 -0.23367000 -0.20641000 -0.20641000 -0.20641000 0.11836000 0.11836000 0.11836000 -0.18754000 -0.24588000 -0.24588000 0.04153000 0.04223800 0.05146000 -0.01736600 0.01727500 0.02055400 0.05316700 0.01180000 0.00145750 0.03658400 0.02964200 0.02331400 0.06001000 0.06001000 0.06001000 0.06001000 -0.25691000 -0.25691000 -0.66457000 -0.67846000 0.02882300 0.00740760 0.08746400 -0.12576000 -0.09029300 -0.23367000 -0.64842000 -0.20641000 -0.20641000 -0.09901000 0.11836000 0.11836000 -0.22487000 -0.08764400 -0.62155000 -0.257 -0.257 -0.665 -0.665 0.000 0.000 -0.126 0.000 -0.234 0.139 -0.509 -0.206 -0.206 0.000 0.000 0.118 0.118 0.172 0.418 -0.225 -0.225 0.000 -0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.257 -0.257 -0.665 -0.665 0.000 0.000 -0.126 0.000 -0.234 0.139 -0.509 -0.206 -0.206 0.000 0.000 0.118 0.118 0.172 0.418 -0.225 -0.225 0.000 -0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.84063632 12.47836458 7.02322208 9.69206342 2.64177721 10.87754327 1.54601778 -0.32843487 7.72501990 7.30817154 -0.32843487 9.42267768 0.08664791 10.29298783 9.27455450 NA 9.27083936 9.40907542 12.06081929 9.19967504 10.14707045 8.69483876 10.13677277 4.64117028 7.39492308 9.18000162 2.73044432 NA 9.64452617 3.08657998 11.89192478 11.66978431 8.43531230 10.74412577 8.11172359 8.89474381 6.04078067 0.08664791 1.25652763 -1.91321623 8.57643182 7.25149093 10.71137944 4.73043889 8.78649476 4.54601778 9.98367313 7.32975778 9.39549172 NA 11.85941400 2.47889417 4.84147000 10.05791918 5.39173336 2.40852166 9.26711486 8.08517446 4.37198394 NA 13.67442007 0.40849449 9.71502951 NA 8.04803342 5.28625649 8.54293822 8.21586688 12.0909853 4.9569488 8.6402131 13.0019499 10.5605433 10.5769334 13.4902285 13.0471290 8.8899079 11.5497251 13.5238809 9.1905275 9.6948388 9.1493048 0.4084945 7.2590116 11.9545383 11.1369428 8.0879921 9.2887078 8.8704008 8.6994524 11.0012774 6.3345111 7.5107499 10.6957627 6.4659630 4.4959765 7.1282429 6.7335740 11.2470857 10.9893359 8.5643423 6.9904659 13.6249548 4.7304389 11.1977196 10.4336516 12.3091525 9.2325161 10.9692270 9.5191259 -0.3284349 8.4508830 9.3661366 3.9194736 11.6944922 7.4659622 10.1829697 11.0676160 7.3486786 13.5480634 9.7839860 10.1438988 13.1823106 9.9115427 10.0904532 1.4084945 TCGA-A7-A26F 55 0 NA 738 breast stage ia t1 n0 m0 2-10-2014 female 2010 NA NA other specify no 0 white not hispanic or latino 142.49.0 NA NA 2 1 NA NA 2 5 1 6 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.396621e-07 1.946798e-07 11.5341921 2.3916303 7.6326288 11.1685025 NA 10.5805468 -2.0679388 10.7985023 11.3800473 9.4058950 9.5274467 8.5348880 8.7298508 9.6417039 5.1705941 9.1269460 8.6360928 10.4718327 9.3093997 7.2518611 9.9840779 10.2245109 13.6757614 10.0090047 10.1854457 10.6410575 5.2720381 10.8300328 0.7395025 1.9321746 9.2935848 12.9479092 12.0861623 7.6567030 11.9364097 11.9741905 10.9692213 5.2631058 2.3244938 5.4867787 8.8163597 8.4723172 8.2764850 11.2642258 NA 11.4825753 10.2586187 7.1942841 8.5706250 11.7782672 9.0717407 6.3751333 -2.0679388 13.7997911 8.7674502 3.2541102 7.6702816 -2.0679388 5.9656112 10.6105693 10.8653266 9.9314847 11.1903135 10.2706470 9.6588331 0.5171245 12.3960329 9.6978897 3.5171497 8.0970961 2.2541102 8.3148134 14.9937819 8.7727154 11.2834045 11.4247935 10.3156235 1.3916028 0.7395025 8.6455756 9.3191295 14.5195859 -2.0679388 5.0090067 7.0196519 10.1519628 10.9986148 7.4925222 8.0666156 4.7135474 11.6373896 11.8363534 2.3244938 13.1857782 2.3244938 6.8148324 12.1990489 13.4876471 12.8030837 5.7839385 10.2935848 10.9455119 10.3601096 11.1173744 5.3916200 7.7233524 11.9840779 8.6515781 -0.4827747 10.6763923 9.7654746 1.7395457 2.6945459 9.7338976 11.3386600 10.8437685 9.7563525 15.1325227 9.8484419 10.2385357 7.5578979 2.5171497 13.7335187 8.3875163 13.3117030 12.6635082 9.6160610 10.2957765 8.7761102 9.4607215 0.2307200 0.2307200 0.0938870 0.1333300 -0.2398400 -0.0959030 0.0279290 -0.0309400 -0.0309400 0.1885200 0.4285700 0.4285700 1.3281000 0.0221610 0.2744300 0.2744300 0.2744300 -0.0732000 -0.0732000 0.3438900 -0.0441350 -0.2538100 -0.2617000 -0.2617000 -0.2516300 -0.0107740 -0.0107740 -0.0107740 0.0255410 -0.2920000 0.2307200 -0.2902200 -0.2578000 -0.0959030 -0.0959030 0.0279290 0.0279290 -0.0309400 -0.0309400 -0.0309400 0.4939100 0.4939100 0.1885200 -0.0679840 -0.0679840 -0.0679840 -0.0679840 0.0221610 0.0975530 -0.3035600 0.2744300 -0.0732000 -0.4435000 -0.1035400 0.3438900 -0.0441350 0.0167150 -0.0279350 -0.2617000 -0.2617000 -0.2995600 -0.0107740 -0.0107740 -0.1530100 -0.0749350 -0.0095329 0.000 0.000 0.274 0.274 0.000 0.000 0.344 0.000 -0.254 0.000 0.000 -0.262 -0.262 -0.300 -0.300 0.000 0.000 0.137 0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.189 0.429 0.000 0.000 0.000 0.000 0.000 0.274 0.274 0.000 0.000 0.344 0.000 -0.254 0.000 0.000 -0.262 -0.262 -0.300 -0.300 0.000 0.000 0.137 0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.189 0.429 0.000 0.000 0.000 8.5939673 13.4118748 5.1513596 8.9022952 2.6326405 10.5697198 1.1021206 7.7217226 8.9663004 9.9992874 NA 8.7170447 8.6169377 10.9183868 9.2507321 2.5171497 5.4944316 9.6887455 8.4230403 7.5651844 10.0672731 7.5190292 11.7166196 3.3584525 8.1083624 9.6588331 0.5171245 NA 10.0103400 2.6870831 12.7741957 11.9935604 8.9144697 10.3634256 11.5793103 9.3072286 4.5760444 3.1416453 -0.4827747 -0.4827747 8.0063306 8.7217230 7.6987179 1.9321746 9.0132666 5.5975252 9.6643566 5.9265427 8.7792466 6.5096183 10.2282451 5.3245082 4.5171497 10.7096356 5.9554453 7.7587376 10.3444944 8.9080371 7.9806760 10.0695007 13.2256968 0.7395025 10.4550159 NA 10.2990578 4.1610089 8.2831282 8.8428318 11.764673 8.134313 8.843581 11.936410 10.322713 10.340254 11.264226 9.695402 9.737933 11.380047 13.538826 10.463327 9.319129 7.944814 2.739546 7.294133 11.270508 11.529194 6.557899 9.699546 8.829278 9.259180 10.115099 7.599301 5.597525 10.009005 7.855517 1.254110 5.112100 8.396776 13.446379 10.321821 8.118304 7.556071 11.081778 8.128176 9.931485 9.706153 11.795020 9.682059 10.760722 10.160106 9.380305 10.360023 8.813066 8.644716 10.998615 8.587720 10.352939 11.637390 7.975216 13.871331 9.873970 10.559267 12.931485 10.418018 10.074934 4.272038 TCGA-A7-A26G 50 0 NA 722 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2010 NA NA other specify yes 0 black or african american not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 5 2 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.455874e-07 3.893595e-07 12.1361785 8.6943645 7.3381828 10.2275539 -0.8688056 10.6569336 NA 10.4491459 11.5515231 8.4417810 9.8544023 8.1673419 8.3539628 9.5563840 8.2973313 9.4037979 8.9766581 10.8548290 8.8734776 3.1311614 9.7048153 10.2318304 12.0633828 9.9320680 9.4497110 10.8119671 6.6028428 11.2237600 0.9385493 0.1311944 9.7938364 12.6960916 13.0939737 8.0795355 10.0007619 11.4223388 9.4898193 4.6703248 2.5234867 7.1755625 8.7614352 10.3560741 8.2436077 9.7987232 NA 10.9756777 9.9600980 2.3010901 8.3450499 11.1129137 7.1645912 5.2186301 0.4531224 12.8840327 11.6369437 2.7750295 7.6290200 -1.8688056 6.5574331 10.3488229 10.4821072 9.3773149 10.2419776 10.2639891 9.9620793 0.7161569 11.4161367 9.8097681 3.1755565 8.7840131 2.7161349 7.3979544 14.8701443 8.5666611 11.1747081 10.9461510 10.7545923 0.1311944 NA 8.7786265 10.1938889 12.1053137 NA 6.0619058 6.5574331 9.9067783 11.2813913 6.3160425 7.9026573 5.2910399 11.1861115 11.6918591 -0.2838431 13.6478530 3.4530961 7.2655944 12.7494962 12.4412128 13.4287292 7.1999461 10.5250947 11.2807564 10.8804677 11.5018555 5.7161294 7.6915007 12.5484932 9.5304459 4.4887207 10.0061495 10.2941887 1.1311944 2.5269202 10.5091919 11.1813568 10.7918325 9.3563756 14.3814665 10.8307405 10.9650464 6.6780620 2.8860623 13.5588083 7.7587023 12.8732669 12.4796888 10.1287004 9.8522673 8.6468679 9.2961251 0.0207630 0.0207630 0.2334900 -0.0040162 0.2616900 -0.2060200 0.0818990 0.0868500 0.0300290 -0.3092100 -0.3092100 0.4648500 0.7372000 0.1625000 0.3512000 0.3690400 0.3690400 -0.0604430 -0.0604430 -0.0553640 -0.3047500 -0.1850900 -0.1748700 -0.1748700 -0.1748700 0.0622230 0.0622230 0.0622230 0.1992300 -0.0499770 0.0207630 0.0278480 0.0451630 -0.2060200 -0.2599800 -0.2930700 -0.3026300 0.3001100 0.0300290 -0.0203890 0.0556580 -0.3226300 -0.3388300 -0.2633600 -0.3033400 0.4439200 0.0000000 -0.2961500 0.1992300 0.3590400 0.3013800 -0.0604430 -0.0507760 -0.0507760 -0.1182200 -0.3047500 0.3729800 -0.0011087 -0.1748700 -0.1748700 0.0076392 -0.3264600 0.0622230 0.2021300 -0.1246000 -0.0096806 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 -0.309 0.156 -0.300 -0.300 0.000 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 -0.309 0.156 -0.300 -0.300 0.000 10.0221923 13.6037955 6.9860366 9.6659573 4.9242852 11.4048180 2.5906020 3.3010901 7.7384983 8.5341799 1.5905781 9.3072290 0.9385493 10.6159910 9.5595283 1.1311944 10.3222273 11.9090398 7.5213374 8.9883714 9.0066102 8.3743423 11.3427522 3.2186262 8.6576672 9.9620793 2.7750295 NA 10.0168644 3.0853567 12.9166205 13.5445646 8.8393899 10.5018555 9.0633829 9.0692774 4.6389600 2.3790941 -0.2838431 0.1311944 7.8692601 7.9043071 8.1241063 5.7677925 8.2171847 4.0619058 9.3289991 7.7786265 10.8983180 6.1700873 12.4509107 3.7161349 4.3790941 10.1912256 7.4024911 8.3623892 9.4592820 8.9907028 8.5792843 -0.2838431 13.2981157 0.7161569 10.3861966 NA 10.2252458 7.2809155 8.6048738 8.5595281 12.2824225 7.3719596 8.8044773 10.0007619 10.2967786 10.5296446 9.7987232 11.2326514 9.0373070 11.3635890 13.4140031 10.7659791 10.1938889 7.5616209 -0.8688056 7.4096175 11.2076497 11.149020 7.273275 8.977442 7.421187 8.401463 10.055494 7.234456 6.397955 9.932068 7.425789 4.670325 7.762345 7.839735 12.761549 10.703158 8.345487 7.439507 11.024849 8.695317 9.377315 9.892304 11.155269 10.492838 11.125168 9.971946 -1.868806 9.335274 8.448230 9.184415 11.281391 9.268800 11.019103 11.186111 7.855682 13.909682 9.982136 11.527773 12.637848 9.730151 9.827266 4.731080 TCGA-A7-A26H 72 0 NA 724 breast stage iia t1 n1a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 2 3 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2.463011e-06 7.631864e-07 11.7589711 6.9963458 7.2696700 10.8675933 0.8700293 11.0113879 1.2325994 10.3949719 11.9799344 11.8591009 10.0051701 7.4635350 9.1394713 8.8291846 7.8907920 8.9190811 10.5249022 10.1925826 7.7786173 5.4463588 11.1404728 8.9859831 13.5905907 11.1464673 9.7119118 10.9085376 5.6625673 10.9167389 -0.3523631 1.0626744 8.8939628 12.3878908 12.8037012 6.9050054 13.4718808 13.1326088 9.3288564 5.1287429 3.3105873 6.4069516 8.2400753 9.5509978 7.7820442 13.0075049 2.9206363 10.4011134 13.2612158 5.5464716 7.5401707 11.3373250 8.8448347 7.5444552 -0.9373256 13.4591105 8.9878910 3.1501210 7.3958109 NA 4.6625701 10.2347705 11.0964227 9.5979309 11.6864228 10.5837652 9.2319543 7.4656676 12.0511628 9.9859831 7.3732680 9.2338325 8.9837526 11.7460889 14.9158189 9.7628222 11.1051700 12.0164883 10.1209856 1.0626744 2.0626398 8.9291619 9.6201194 11.4462249 -0.9373256 6.6210760 6.7526536 10.2085877 11.5394018 5.9992943 7.1287450 6.0626549 10.9807734 12.3001643 3.6476138 13.1154783 5.7208667 7.0905613 12.6974100 12.9835202 13.5158298 7.6792042 10.0077336 11.0271770 10.7520574 11.4834054 5.5464716 8.1659436 13.4802774 11.3986042 0.3846025 10.2149404 9.6220328 1.9695281 3.5577164 10.5087051 9.8513740 10.7076385 9.2512445 15.0615104 9.9167447 10.8655758 9.7105637 3.4889263 15.6322962 9.4251475 13.2012474 11.4295242 9.9669139 9.2884656 8.7315407 10.8709783 -0.03395000 1.11040000 1.11040000 0.03326700 0.47667000 -0.01277200 0.02160300 0.00346870 -0.00650500 0.65627000 0.65627000 0.66235000 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.05751100 -0.51599000 0.77329000 1.59880000 0.01866300 0.01866300 0.01866300 0.00402430 -0.03395000 -0.03395000 0.00000000 -0.53226000 -0.01023200 -0.01277200 0.02160300 0.02160300 -0.00013862 -0.00650500 -0.00650500 0.48475000 -0.01202400 -0.24995000 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.05751100 -0.01615400 -0.51599000 0.77329000 0.00736090 0.01866300 0.01866300 0.00402430 0.14622000 0.02272500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 9.2313278 13.6434147 7.6588456 9.6555797 3.9933936 10.1685641 3.1070517 0.6476369 7.1737910 8.1448045 NA 8.9876017 2.3845748 10.6750634 9.4013920 3.0168528 8.6709104 8.7587539 11.1634822 10.0909070 9.5916127 8.5822918 10.0132116 2.5220809 7.8812376 9.2319543 3.1501210 -1.9373256 10.5469751 2.9206363 12.7004692 12.0557709 8.3492135 10.1669268 9.8399109 8.8635554 4.7208694 1.8700293 0.6476369 5.6476167 8.2275625 8.7674237 10.7907887 5.2721091 8.8942797 5.5383892 9.5459676 7.4910161 9.1874231 -1.9373256 11.3516658 3.9933936 4.8308384 8.8769979 5.5296898 4.7905740 9.8221277 8.3352854 5.7561426 -1.9373256 13.8182735 -0.9373256 10.3988831 NA 8.2830342 4.8440140 8.0499199 8.8505582 13.7337366 5.3572775 8.7751826 13.4718808 10.6262047 10.7121364 13.0075049 13.3054576 9.5644929 11.2065171 13.2665771 9.8562590 9.6201194 8.7101142 0.3846025 8.3070195 11.7492655 10.850558 7.915965 8.971799 8.642914 9.723988 9.985311 7.298670 8.259872 11.146467 6.720867 3.790574 5.062657 7.970042 12.639081 10.327098 7.509160 8.262328 12.822596 6.442034 9.597931 10.217157 11.956715 10.136128 10.836001 9.725324 6.945299 8.869882 7.709970 6.117938 11.539402 8.795671 10.182676 10.980773 8.378982 13.658962 9.972174 10.354114 13.687337 10.304937 10.367007 1.870029 TCGA-A7-A26I 65 0 NA 661 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 5 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.674735e-07 1.112456e-07 11.4576108 4.0039889 6.8289984 12.6711581 -0.2689906 10.0423368 NA 9.9158422 11.9236706 5.2012849 9.5827159 7.8184294 8.0209855 9.5748879 7.5972153 8.6388591 9.9609873 10.4302501 8.4758007 2.3159429 10.5551300 9.2288187 13.1000189 10.3093396 9.2694792 10.5226724 4.1683693 10.8418764 -0.8538662 2.4679315 8.8024291 12.5683320 12.3060333 8.3891783 12.3780505 12.0513914 9.3814203 7.0914481 3.8739214 9.2858498 8.4383261 7.5079484 9.0078666 5.0286487 -1.8541269 9.6453520 11.6019737 10.7034680 9.1000915 10.2746431 5.9207911 6.1628122 -0.2689906 14.4112802 10.3757244 5.1794274 8.6705461 10.3861994 4.2752902 10.4136689 10.6535513 9.9042276 10.4060418 10.0179095 9.6498301 -0.8538662 12.0391162 10.7386950 4.9273655 7.3700064 NA 5.2440346 15.1274044 8.4942568 11.2409067 11.0927279 9.2577921 1.6054469 NA 9.0796949 9.7839876 10.3657779 -0.8538662 6.5596325 8.1488192 10.3739211 11.8600352 6.2855557 6.5297085 4.9008910 9.5559256 12.0949191 3.1903936 13.6539229 4.8042136 7.0737828 11.7528722 13.3109898 12.8886822 6.9757276 11.5090440 11.6691987 11.0406308 11.4254698 4.9788958 7.2881112 11.7377604 7.5638567 3.2752902 10.9442736 9.6841933 7.3963025 4.3372116 10.0055391 11.0377880 10.1621162 9.0271184 14.9515845 10.2626732 10.0374083 7.0885190 5.8464432 11.2099050 10.4391885 12.0435662 13.6576026 9.8726483 9.3945249 8.8756250 11.2993173 0.01377200 3.39120000 0.68742000 -0.37189000 0.02496900 -0.36204000 0.33027000 0.35790000 0.00027728 0.35186000 0.35186000 0.35871000 1.98620000 0.32898000 0.01768400 0.01936300 0.01936300 -0.35761000 -0.35761000 -0.37338000 -0.36352000 -0.37200000 -0.36604000 -0.35236000 0.00000000 -0.36011000 3.65690000 0.45820000 -0.39519000 0.02373400 0.01377200 -0.00981850 -0.37040000 0.41030000 -0.36204000 -0.37876000 -0.36386000 0.35790000 0.00027728 0.38072000 -0.40340000 0.69540000 0.35430000 0.39562000 0.39562000 2.43240000 -0.77337000 0.32898000 0.37199000 -0.77753000 -0.00092117 -0.35761000 -0.38640000 -0.38640000 -0.37234000 -0.36352000 -0.38616000 -0.38403000 -0.36604000 -0.35236000 -0.01835300 -0.35544000 0.45820000 -0.39063000 0.38717000 -0.39018000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 7.7808153 13.4709232 6.5383224 8.6597319 1.2586998 14.2475492 -0.8538662 5.9008910 9.1910814 10.4628515 3.1903936 9.1627151 7.1849229 11.0379778 8.3663825 0.7310094 4.7005951 9.6090178 7.9306392 8.2347925 9.5803877 8.5553952 11.9945295 2.5383147 7.2649455 9.6498301 5.4314057 -0.2689906 8.8086727 3.9533584 12.8268034 12.3905912 8.5057540 9.4157156 10.9442736 11.7935752 4.3358262 1.7309660 0.9533770 -0.2689906 6.9597852 7.2675377 7.3748230 1.6054469 8.3218032 6.4947324 9.7889586 5.8464432 9.8060003 5.0528940 9.3401456 3.8464432 4.6217354 10.4961756 6.2693493 4.6217354 8.3844091 7.9867824 5.1460035 8.0240553 13.0893433 0.4679055 10.4512111 -1.8541269 9.9269542 3.7005951 9.0309380 8.9765194 10.440625 9.867958 8.113231 12.378050 9.550081 11.083562 5.028649 8.941232 8.445212 10.536173 14.587862 10.487801 9.783988 7.740329 NA 8.027118 10.136817 10.462852 4.335826 8.962988 8.584796 9.123957 9.171116 6.179427 4.028649 10.309340 10.264297 2.669571 6.657757 8.339764 12.436887 9.771257 6.814889 7.605436 10.360323 5.449786 9.904228 9.726263 12.288351 9.914189 9.763472 9.993453 NA 9.378162 6.909051 5.775361 11.860035 8.314677 9.475733 9.555926 8.079695 13.648308 10.661950 10.633091 12.153470 11.111248 8.838620 7.499151 TCGA-A7-A26J 49 0 NA 627 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 1 2 NA NA 1 1 3 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 8.343418e-08 10.5915504 5.2371545 6.1426074 10.9140047 0.9784153 11.3128517 1.3409610 10.9390413 12.2804864 12.3662053 10.3163592 7.8801474 8.6679177 8.6191801 6.9976119 9.1165077 9.8823005 9.8319512 7.7985975 1.1710787 10.9288705 8.6046492 13.1702711 11.8761562 9.3296735 10.6578988 3.5973286 10.8248001 -1.8287932 2.0779607 8.4178044 12.3702761 12.8139617 8.2425263 13.0793157 14.3518277 9.3334553 4.3208096 NA 6.7063385 8.6778673 9.5703417 7.7728345 12.9906442 4.4929940 9.7649218 13.4342597 5.1822911 9.9326317 10.7194041 7.5131386 9.3112545 0.1710787 14.3615761 8.2003508 0.9784153 7.4839471 NA 4.3998820 10.3356565 11.4302186 10.6077754 11.4874868 9.8925903 9.1084377 1.1710787 12.0119401 10.0719306 5.4378503 8.7588415 0.1710787 10.4349199 14.2319708 9.6754658 13.0126773 12.3751764 8.1569057 0.1710787 3.3003434 9.3872033 9.8140181 11.9643623 -1.8287932 5.9259520 7.1682429 10.9762031 11.1715921 5.5373862 6.7746896 4.9259520 10.7607150 12.0601875 3.7560305 13.4137169 6.1194309 7.6867638 12.3476266 12.5853527 13.1979330 8.1512033 10.7461303 11.1826405 11.2185951 11.7907107 5.6629176 8.9284538 12.0223249 9.7063392 NA 9.8198708 9.7092527 0.1710787 4.2728817 9.3938587 11.1939518 10.3905349 10.1896117 14.4737028 10.3722688 10.8223398 8.9864471 2.8715086 14.6109434 7.6709097 12.6515385 11.7017140 10.0594265 8.9679147 8.7246932 10.4663104 -0.0193140 1.0686000 1.0686000 0.0237060 0.0237060 0.0000000 0.5615200 0.5711300 -0.6432500 -0.6463100 0.5552600 0.5613400 -0.0121620 -0.0121620 0.5546000 3.3815000 -0.6315000 0.5424200 0.5343200 -0.0342230 -0.0085766 -0.0128510 0.5503600 0.5503600 0.5503600 -0.0514510 -0.0514510 -0.0514510 0.5634700 -0.0289010 -0.0193140 -0.0258930 0.0237060 0.0000000 0.0000000 0.5615200 0.5615200 0.5711300 -0.6337700 -0.6432500 0.0100060 0.0100060 -0.6463100 -0.0183530 -0.0183530 -0.0183530 -0.0183530 -0.0121620 -0.0121620 0.5546000 -0.6434900 0.5424200 0.5343200 0.5343200 -0.0342230 -0.0085766 -0.0083005 -0.6468700 0.5503600 0.5503600 0.0112610 -0.0514510 -0.0514510 0.5634700 -0.0142280 -0.6181500 0.000 0.000 0.555 0.000 0.534 0.534 0.000 0.000 0.000 -0.028 -0.607 0.550 0.550 0.000 0.000 0.000 0.000 0.000 1.069 0.563 0.563 0.000 -0.618 0.000 0.000 0.000 0.000 0.000 0.000 0.562 0.562 0.559 -0.075 0.000 0.000 -0.091 0.555 0.000 0.000 0.000 0.000 0.000 0.555 0.000 0.534 0.534 0.000 0.000 0.000 -0.028 -0.607 0.550 0.550 0.000 0.000 0.000 0.000 0.000 1.069 0.563 0.563 0.000 -0.618 0.000 0.000 0.000 0.000 0.000 0.000 0.562 0.562 0.559 -0.075 0.000 0.000 -0.091 0.555 0.000 0.000 0.000 8.5042191 12.8569076 8.3926510 9.7107073 4.1934327 10.5469178 0.1710787 0.1710787 8.3409890 7.7522642 0.4930324 9.0133514 3.7857702 10.1597485 9.2092969 1.9784153 8.4355065 9.9638541 6.6098554 9.8448145 9.7009872 8.4118550 10.1501317 3.1710627 7.8310595 9.1084377 2.8715086 NA 10.4240248 1.6304987 11.5910240 11.9231308 7.8363995 10.3789933 11.3131709 8.8549357 5.4378503 0.7559985 0.7559985 8.0719305 8.3384819 7.2532131 9.9040791 4.7560252 6.9378246 5.7857728 10.7378314 7.4046835 10.0609480 -1.8287932 11.1258054 4.6140089 3.7560305 9.6239691 5.8163616 3.2585340 9.6356097 7.7275699 4.8292762 -1.8287932 13.5872016 -0.8290494 9.8505440 -1.8287932 7.8113085 4.1018013 7.7409195 8.5275157 14.231572 6.131067 8.424911 13.079316 10.397410 10.962227 12.990644 12.693339 8.540399 11.871898 13.538513 10.948525 9.814018 9.231760 1.871489 7.634588 12.286920 11.114678 8.249214 8.905774 9.859314 9.773299 10.750762 6.550442 8.070421 11.876156 5.836399 4.800418 6.678858 7.734603 11.174757 9.861935 9.360271 8.741868 13.973100 5.290004 10.607775 10.737594 11.088809 9.531911 10.849664 9.128166 -1.828793 8.546429 8.450233 4.563384 11.171592 7.463385 10.018513 10.760715 8.094391 13.492957 10.261838 9.730441 13.226389 9.988047 9.920095 1.492981 TCGA-A7-A2KD 53 0 NA 679 breast stage iiia t2 n2a mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 8 black or african american not hispanic or latino 216.36.0 NA NA 1 3 NA NA 1 1 3 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 8.065304e-07 1.946798e-07 10.95854641 6.34702601 8.55379208 11.05091793 0.41629931 11.47143522 NA 9.88103838 11.26491134 10.23646739 9.92011417 8.41064172 8.98917819 9.59868268 7.53315216 10.28325820 9.54350884 10.07628424 7.46286704 3.09435432 10.63497273 10.13259342 13.23075068 10.23646739 9.46341239 10.46504770 6.34702601 10.43447467 NA 2.26429621 8.54144360 11.74271785 12.03311289 6.72735552 16.87040449 12.90201707 9.77998506 7.42751567 5.10558590 7.83076237 8.97929400 10.32917776 7.57817642 12.78495852 0.09437121 9.83624859 13.14003463 6.00125054 8.59945728 11.08481882 8.21070446 3.18181815 -0.32066629 13.44145564 10.17284475 NA 8.11949988 0.09437121 4.64894856 9.74675716 11.67084463 9.05073649 11.00350330 10.46177502 10.09365564 2.55380283 11.74249311 10.15269034 7.17650928 7.66041455 4.04855880 11.32453088 14.79827737 7.90560663 10.85029101 11.99031418 8.32678135 4.36114371 -1.90562879 8.72462742 8.67650226 10.69148173 0.67933371 5.52899006 6.29403252 10.28078411 10.93139682 5.51221424 6.88226276 5.10558590 10.42247417 12.28580512 3.79480053 13.35406677 6.29893136 7.00125054 11.84160920 13.04892013 12.78140785 7.08020249 10.44805847 10.51300350 10.24017466 10.57590744 5.52062654 8.31473866 11.91144386 11.57779819 4.09436276 9.83245255 9.27177978 1.67933371 2.73820578 10.12606144 8.64414506 9.98348389 10.63690851 14.86024203 11.57439310 9.92408296 8.79045830 1.90172613 15.56853360 9.15032053 12.73821646 12.03118223 9.99598149 9.42975069 7.58420789 9.70711820 -0.301930 0.077430 0.077430 -0.317160 -0.315170 0.033408 0.678340 -0.319490 0.022725 -0.708180 -0.656220 1.049900 -0.696400 0.068665 -0.024251 -0.041838 -0.041838 1.324400 0.128550 -0.344000 -0.313070 -0.321930 -0.540880 3.656900 0.243260 1.197000 -0.267390 -0.265280 1.439000 -0.686240 -0.297090 -0.329710 -0.320370 -0.301110 0.034076 -0.339290 -0.351840 -0.319490 0.022725 0.348760 -0.334100 0.110120 -0.755900 -0.661950 -0.648280 0.343560 0.343560 -0.313770 -0.364650 -0.024251 -0.410910 -0.684780 0.128550 0.128550 -0.327090 -0.313070 -0.340570 0.676410 -0.703700 1.064400 0.352670 -0.656680 -0.527570 0.015444 0.023987 0.310010 -0.300 -0.300 0.000 0.000 0.129 0.129 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 -0.004 -0.680 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.317 -0.648 -0.305 0.193 -0.300 -0.300 0.000 0.000 0.129 0.129 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 -0.004 -0.680 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.317 -0.648 -0.305 0.193 8.9922056 13.2418435 8.8051667 9.3505691 3.2642812 10.7823920 2.0012618 -1.9056288 8.6354569 8.1778396 -1.9056288 7.3910468 3.6179214 10.4837228 10.2303901 5.9081404 8.6383588 9.2498110 10.3904161 10.5947043 9.4474850 8.6422189 10.6206150 3.3038100 8.2479123 10.0936556 2.4162993 NA 10.5227205 3.3038100 12.1959257 11.6532593 8.0072499 9.5496875 10.1428471 9.4634124 6.8154589 1.4162993 -0.9056288 8.7436166 9.3699029 9.5756551 9.7861038 3.4162858 6.2433968 6.8459040 9.9815808 8.5164249 10.6616034 NA 9.4009917 3.0485501 3.9272517 10.5234872 6.9711837 4.8757211 9.2523388 7.8324527 7.0858824 -0.9056288 13.4182595 1.9017261 9.9359247 NA 8.5650190 4.6489486 8.8567424 7.7327963 13.354111 6.088714 8.733701 16.870404 9.769435 9.763245 12.784959 12.889284 9.077924 11.739118 12.886083 10.331271 8.676502 7.817168 3.952343 8.039804 11.808284 11.4689923 8.0929505 8.5352295 8.9647250 10.7917623 10.9206187 7.5781764 9.4666812 10.2364674 6.8984913 0.6793337 10.5984344 9.7768370 11.2066369 9.8695590 7.8575724 9.3546917 11.8462181 6.1277839 9.0507365 10.2564368 11.5909644 10.2268600 10.9341546 8.9967353 1.4162993 9.5814718 7.8628258 6.4430878 10.9313968 7.7632456 10.5214112 10.4224742 7.3255816 13.4174854 9.4963063 10.0855278 13.8280377 11.1569124 9.7422683 2.4866886 TCGA-A7-A3IY 71 0 NA 345 breast stage i t1c n0 m0 2-10-2014 female 2011 NA NA mucinous carcinoma no 0 white not hispanic or latino 216.36.0 NA NA 2 5 NA NA 1 4 3 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.368085e-07 7.600473e-08 11.4784816 3.2898935 5.7679408 10.8594772 -0.5174615 10.6005055 NA 9.0090369 10.8232225 8.4923664 9.0843085 7.5459329 8.2834375 9.4526438 8.0485920 8.9793918 9.7245210 10.1650935 7.6723624 5.1829783 10.1720991 10.2806046 12.9807638 11.0163542 9.3327247 10.3769766 4.7113572 9.6956421 2.0675010 1.2898935 8.4396398 11.7675065 12.7578621 8.6636901 11.0656206 11.4956860 11.2979212 7.3248880 3.4367349 7.2995213 8.3027166 10.6615138 7.5486270 12.9994074 1.0675010 10.7203453 13.5920421 7.1155327 9.8027968 9.9409444 6.4937658 9.3003210 3.9088033 15.0968506 12.7016368 2.6524635 8.1064195 -0.5174615 3.4367349 9.2357546 10.3444002 9.8929891 9.8667819 9.4147527 9.8515898 4.0061005 10.3905551 9.4206472 7.0371263 7.8919289 13.6076688 11.4949878 14.5792118 6.1664443 10.8858162 10.4722871 8.1916219 4.0675010 4.9419702 8.0824509 8.2256895 10.9381219 0.4825385 6.1829783 7.0749945 10.5017811 11.1980709 10.1191625 6.3590555 4.1263947 10.7708271 11.6689616 NA 13.5257360 7.2573247 7.5486270 11.6970088 11.2935111 12.3966426 8.3894283 10.9038138 10.7574984 10.6143948 10.1920525 3.9419702 9.1478737 11.3739418 10.8828837 -1.5174615 10.2931095 8.7292785 1.9419702 2.4217754 9.5391755 10.7705387 10.4334582 8.9234071 15.0283319 10.0265363 9.2556770 7.5378202 5.2104590 16.2631353 7.3682340 12.5991255 12.1764603 9.3636519 9.4381878 7.2273714 9.5133083 0.0011093 0.0011093 0.0011093 -0.0486130 -0.0486130 0.0144700 0.0020805 -0.0044312 -0.1659200 0.0065960 0.0065960 0.0065960 -0.0008316 -0.0008316 -0.0030475 -0.0030475 -0.0030475 0.0033299 0.0033299 0.0036076 0.0011093 0.2848500 -0.0083005 -0.0083005 -0.0083005 -0.0107840 -0.0107840 -0.0107840 -0.0121620 -0.0064957 0.0011093 0.0058309 -0.0486130 0.0144700 0.0144700 0.0020805 0.0020805 -0.0044312 -0.1659200 -0.1659200 0.0000000 -0.0140900 0.0065960 -0.0030475 -0.0030475 -0.0030475 -0.0030475 -0.0008316 -0.0008316 -0.0030475 -0.0030475 0.0033299 0.0033299 -0.0080970 0.0036076 0.0011093 0.2848500 -0.0081624 -0.0083005 -0.0083005 0.0033753 -0.0107840 -0.0107840 -0.0121620 -0.0049844 -0.0400730 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.45408128 13.03784595 7.60924228 9.37432160 2.16848158 10.28019938 1.06750105 3.06750105 8.79768746 8.58451347 0.06750105 7.26717246 2.80446664 10.48921456 9.28666888 2.38942914 5.95827198 9.29631905 9.82849751 9.30032098 10.17835773 7.00217368 12.19689070 4.52693267 9.28666888 9.85158977 2.87485597 NA 10.28908748 3.48253855 13.61491707 12.94593449 8.01586772 10.05476438 9.68343645 9.48675821 3.12639474 3.61182156 -0.51746145 5.34051954 8.73402028 11.07779530 8.16903857 3.84009055 8.34692499 7.27370050 10.52624873 5.51596155 9.39093052 0.06750105 11.40233228 3.90880330 7.85322533 9.81932331 7.03589879 0.06750105 10.21767071 8.67236240 5.63228567 0.80446664 14.10564772 1.48253855 10.89933540 NA 9.47051246 5.11189517 8.05049408 9.36975851 13.1751032 5.7586630 8.8834174 11.0656206 10.5300026 10.5087155 12.9994074 12.0788441 8.8944513 10.1096157 13.0632086 10.6076283 8.2256895 10.0366470 0.8044666 7.3682340 10.7484459 10.616322 5.591063 9.497953 8.160258 8.279502 9.389857 7.758662 8.593673 11.016354 6.799950 1.067501 10.289893 7.177070 12.352035 10.068439 8.532386 9.627833 8.973389 4.632286 9.892989 10.770250 10.539514 9.451205 9.892989 8.230731 NA 9.659166 6.359117 2.804467 11.198071 7.404379 10.659646 10.770827 6.696856 14.648936 10.565020 10.438914 12.681673 10.356751 8.897223 NA TCGA-A7-A3IZ 62 0 NA 322 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes NA white not hispanic or latino 202.42.0 NA NA 2 2 NA NA 1 1 2 3 5 2 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1.724306e-06 7.230962e-07 11.10616986 3.43684144 7.43684227 11.86389278 NA 11.00574804 0.02176397 10.21902110 12.38109639 10.08654708 10.35793891 7.52430507 10.16135577 9.17493417 9.49956270 8.52827711 11.52364154 9.35047935 6.82054661 NA 11.33165965 10.19047647 8.88289122 12.52040430 9.01332630 10.55448496 3.39103904 10.61985691 0.02176397 3.29482657 7.48669024 10.98566379 13.14926140 4.58659062 13.31527602 12.96407449 7.05522711 5.50293202 3.29482657 3.58414474 8.57639327 10.60049157 6.12334339 13.83334631 4.34373470 8.92468188 15.53876626 0.43680147 9.82835930 10.99812984 6.44806839 7.08069816 -1.56319853 13.63130326 8.07346626 1.43685476 7.21162941 4.74062000 3.96040050 10.32634578 9.76045966 11.01356240 11.35607766 10.37531882 10.21327485 2.96040050 11.13467826 10.85495804 6.63651442 7.91864145 13.13868978 11.82741392 14.15307187 9.12072258 12.24339150 11.95917819 8.03303144 1.02183503 NA 8.47850107 9.15280376 9.70421388 0.02176397 5.36758074 7.07708701 10.79081569 10.52098584 2.34372049 5.00669747 4.64629517 10.21532975 12.34072370 3.29482657 13.37573226 4.82915950 8.07889372 11.29423975 10.69629095 12.97696990 7.23774152 10.57926804 10.72973858 10.83887064 11.91939778 5.98373697 8.15794107 11.78280148 12.15291107 -0.56319853 10.09505332 9.01804241 NA 3.14226638 10.06163729 10.01615781 9.89062696 8.49753772 14.29603690 10.47678903 10.00003818 9.72397709 2.60677384 16.18966022 4.29481922 12.30720659 10.45469421 10.17408915 9.66986228 8.51632684 11.31229941 -0.0167530 0.6345200 0.7397900 0.0052258 0.0000000 0.0182650 0.0142810 0.0064771 0.0170750 3.6569000 -0.0207350 0.0113510 -0.0011444 0.0028643 0.0099570 2.4647000 3.6569000 -0.0179890 -0.0071751 -0.3129900 -0.0029580 -0.0101430 -0.0531190 -0.0531190 -0.0531190 -0.0828480 -0.0828480 -0.0828480 -0.0146890 -0.0509140 -0.0167530 0.0443820 0.0052258 0.0182650 0.0205730 0.0142810 0.0142810 0.0064771 0.0145600 -0.8690100 0.0074509 -0.8534000 -0.8432600 0.0074509 0.0074509 0.0074509 -0.0168900 0.0028643 0.0028643 0.0099570 -0.8324700 -0.0071751 -0.0071751 -0.0071751 -0.3153400 -0.0029580 -0.0203120 -0.8696500 -0.0531190 -0.0531190 0.0208530 -0.1194400 -0.0828480 -0.0146890 -0.0010191 -0.0483900 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 7.8140524 11.7154365 3.9286925 9.1021778 3.1917363 11.0764087 0.7587296 NA 7.5916600 8.9730892 NA 6.2306718 -1.5631985 9.3194849 9.5872238 3.7943951 6.4866902 9.7446119 12.8986410 10.3380859 9.6197451 8.5453665 10.9747883 3.4368414 9.4839659 10.2132749 0.7587296 NA 10.4508623 3.3910390 11.8125601 11.6846211 7.2570210 10.7494412 7.5763929 9.1908943 5.6462952 2.7587722 0.4368015 1.2442173 8.8931962 9.1215905 10.3716385 2.6847739 7.3705322 6.7987854 10.4491172 6.5243051 9.8113381 NA 10.5869065 6.3072063 7.3997376 8.5558606 6.3526614 NA 9.1707045 7.6680631 7.3377084 NA 13.6698248 0.4368015 10.1553747 NA 7.7106377 5.4702635 7.9044474 8.7463181 17.295221 5.051550 8.176622 13.315276 9.714710 10.492124 13.833346 13.096671 12.320705 10.879526 12.417963 11.836921 9.152804 8.938679 1.606774 7.648730 11.605044 11.137932 8.363138 8.474389 10.132505 9.107498 10.949217 5.854694 5.524305 12.520404 6.924682 3.566121 8.850470 7.476666 9.646904 9.963341 9.816762 8.976001 13.007943 1.896272 11.013562 9.955495 11.602220 10.448768 10.733758 8.592925 NA 9.028299 6.366633 2.244187 10.520986 4.829159 11.214508 10.215330 7.663254 13.994665 9.848353 9.439657 12.405689 10.542750 10.531909 1.021835 TCGA-A7-A3J0 62 0 NA 313 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA mucinous carcinoma no 0 white not hispanic or latino 202.42.0 NA NA 2 2 NA NA 1 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.88818e-07 2.584161e-07 11.905695 2.631500 7.869916 11.447961 -1.953439 10.387789 0.368489 9.930719 11.562372 9.381939 9.838118 8.097757 8.932245 8.886539 7.388624 8.551368 11.615455 10.021680 7.799765 1.631523 10.274766 9.929574 13.792853 10.797883 10.155073 10.557807 5.760793 10.178389 3.661259 3.331949 6.791382 11.995646 13.654486 7.999290 11.257828 12.475105 10.070996 7.847448 4.472813 5.123364 8.019528 9.399695 5.144581 13.736956 3.175828 10.068570 13.611770 7.165490 10.437429 10.551616 6.035232 8.140626 1.046561 14.994696 10.670430 2.505993 8.486379 NA 4.134007 9.366221 9.744385 10.398316 9.225213 9.730859 10.324998 2.134024 11.232508 10.670887 7.294476 7.882599 13.446227 11.939850 14.442049 9.089035 12.168244 11.427010 8.387511 2.801428 1.046561 9.440475 8.848257 9.343465 -1.953439 1.953452 7.855513 9.462818 10.890862 11.647158 5.585708 5.123364 10.876073 11.680111 -1.953439 13.020336 7.155073 7.390845 11.970062 9.678635 12.518097 6.715434 10.738728 10.449827 10.301480 11.058125 4.840967 8.289722 11.183700 11.194707 NA 10.182258 8.994916 1.368489 2.368489 9.714104 10.943070 10.601617 9.078594 14.551647 10.899663 9.988696 7.191206 1.216486 16.460788 7.399695 10.613078 10.410957 9.780411 8.955691 7.779564 10.606466 -0.01078400 0.29803000 0.29803000 0.00000000 0.00000000 0.00097064 -0.01367700 -0.01037000 -0.01037000 0.78510000 0.78510000 0.79084000 -0.01711600 -0.01711600 0.76312000 0.76312000 0.76312000 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.02753500 0.70455000 0.70455000 0.71039000 0.62497000 0.69148000 0.65433000 -0.05185600 -0.05576900 -0.01078400 0.00097064 0.00000000 0.00097064 0.00097064 -0.01367700 -0.01367700 -0.01037000 -0.01037000 -0.00193990 -0.01078400 -0.01585100 0.78510000 0.63372000 0.63372000 0.63372000 0.63372000 -0.01711600 -0.01711600 0.76312000 0.76188000 -0.01601700 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.02753500 -0.03653800 0.70455000 0.70455000 -0.00940460 0.62497000 0.69148000 -0.05185600 -0.02603000 -0.05415100 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 7.76079378 10.74068872 5.60113787 9.14523852 5.28495454 10.87646937 3.29447372 -0.95343909 8.63526321 6.66493361 1.04656091 6.17747934 3.53840159 10.23328173 9.36960323 2.04656091 6.83118308 9.57792991 11.63432603 10.21866349 9.74166804 8.07030291 10.81493961 2.29448842 9.96130730 10.32499799 2.90452263 NA 10.83036523 3.33194880 12.72740247 12.19946709 6.55830131 10.68882587 7.21897583 9.56618479 6.39527706 4.38639711 0.04656091 4.02383196 9.78969991 11.07997151 8.74264662 2.57009857 10.13679327 7.49156373 10.75455459 5.29447739 9.42375904 NA 13.84164960 3.90453227 9.86991581 9.21993832 6.90564814 4.63151177 8.33310614 7.72602874 8.92459935 -0.36847659 13.05410144 0.36848900 10.89693070 -0.95343909 9.90102737 4.00074820 7.45169001 9.72206448 13.204578 5.675906 8.788858 11.257828 10.809346 9.881809 13.736956 13.350044 9.442875 10.628690 12.709328 11.430928 8.848257 7.629631 2.046561 7.818038 11.029898 11.160128 7.944394 8.843399 8.723387 9.099796 10.957557 6.722506 9.256002 10.797883 6.554343 NA 8.315675 8.307668 12.053751 10.251425 8.522282 10.177119 9.884571 5.601138 10.398316 9.901027 11.217725 9.854708 11.032390 10.296847 NA 10.012466 5.903224 5.668601 10.890862 9.837304 12.139884 10.876073 7.338916 13.718753 10.033813 10.350900 13.783400 10.612840 9.770636 2.904523 TCGA-A7-A3J1 63 0 NA 343 breast stage ia t1c n0 mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 202.42.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.112456e-07 11.1785647 8.6724543 6.5084778 11.6826217 2.9111355 10.4606846 -0.3619725 9.9361763 12.2233110 9.4752160 10.0668229 8.6761182 9.2668631 9.2509822 7.3592128 9.4508259 10.9825946 9.4862150 7.5450046 3.5767156 11.3992494 10.7109163 8.7912437 9.4007727 9.0927558 10.4786295 8.1002749 10.4073372 0.8605259 3.0975434 9.2951343 11.2425125 12.4290052 6.8669327 13.5553615 13.5633591 9.5222843 6.4582934 3.5450046 7.1272928 8.2998916 10.7055482 6.9600413 12.8344597 0.8605259 11.5370930 14.4152321 7.5268568 10.1487098 10.5151422 9.3187663 5.8986413 NA 14.7932366 13.4824674 2.8605060 8.7878608 0.6381202 5.1084325 10.1226010 10.4054706 10.0185748 11.4472119 9.7457667 10.3520730 2.5125809 11.8790044 11.0589512 7.4216576 8.3022647 0.6381202 10.4494884 14.6872674 8.0492436 12.1099583 11.2051191 8.3222779 2.9600483 7.3592128 9.1084338 9.3437462 11.2279209 -1.9467496 3.5125809 7.7202627 10.2151428 10.6847831 2.8605060 7.2155427 4.8213378 10.4230212 11.4748216 3.3010754 13.4772847 6.5207570 7.6861461 11.4423793 11.8646263 12.5853245 8.9258262 9.5520004 10.6498069 10.5013759 11.6813689 5.6970065 8.5923101 11.2505216 10.8785076 -0.9467496 10.5046200 9.0261311 2.0531461 3.7558063 9.8426849 10.8495965 9.8291730 9.0975455 14.7580140 10.6997099 10.0218181 9.2650395 2.4454619 15.5544520 9.6362340 13.5022999 12.6227696 10.3809846 10.0051644 7.9479688 11.1747446 -0.5355100 0.5290600 0.5345000 0.0000000 0.0000000 0.0088920 0.0420240 0.0068044 -0.5484400 -0.5372300 0.0079175 0.0079175 0.0127950 0.0127950 0.0026357 0.0026357 0.0026357 0.0019418 0.0019418 0.0059123 -0.5340900 -0.3977500 -0.0105080 -0.0105080 -0.0105080 -0.0309290 -0.0087146 -0.0202750 0.0120970 -0.0023553 -0.5355100 -0.1914900 0.0000000 0.0088920 0.0026357 0.0420240 0.0420240 0.0068044 -0.5484400 -0.5484400 -0.0037395 -0.0343590 -0.5372300 0.0111210 0.0111210 0.0111210 0.0111210 0.0127950 0.0127950 0.0026357 -0.5374400 0.0019418 0.0019418 0.0019418 0.0125160 -0.5340900 -0.3977500 -0.5490500 -0.0105080 -0.0105080 -0.1950000 -0.0309290 -0.5647500 0.0120970 0.0070826 -0.2132100 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.480 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.480 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 10.11012765 12.60245463 5.42818930 10.45962198 5.68694587 11.09069818 6.03043099 -0.94674962 8.64467361 8.77766497 -1.94674962 7.97649367 5.19270312 9.72425002 9.82793840 3.09754338 9.57229606 9.46836480 9.27231975 10.56737213 10.03642283 7.84105354 10.99162820 5.55299794 10.33942025 10.35207301 3.09754338 NA 11.08002049 3.54500460 11.88247760 11.98591965 8.19908337 9.51463063 10.90118730 9.21491308 5.95401713 -0.94674962 0.05311134 5.47941490 9.22870087 9.79082106 9.98129941 6.32927611 8.97856490 7.56687907 10.54249748 7.23057098 9.57671316 NA 12.56731052 4.00734802 5.23305974 9.40328370 6.15921744 6.52888539 9.97981786 8.83778623 6.92043027 0.37506724 13.19529821 2.22308269 10.40932814 0.05311134 7.35921279 6.36149116 7.11654670 9.05033082 11.776916 5.223075 8.465721 13.555362 10.494280 10.505135 12.834460 11.859802 9.319229 11.056494 12.923082 10.382387 9.343746 8.757055 2.445462 7.370564 11.289913 11.62324411 7.36603452 8.28437254 8.99786340 8.58842682 10.85436849 8.91501350 8.69339635 9.40077272 6.63058021 3.69700646 7.70060964 7.22827614 9.91617595 10.65376111 8.60068195 8.85405114 12.68943600 7.59230977 10.01857479 10.36348004 10.96248186 10.50100934 11.15430624 8.31053917 0.05311134 9.65548368 6.99859494 7.98978900 10.68478307 6.46254153 11.28721722 10.42302123 7.84113533 12.79950550 10.12494881 9.86050614 12.82752652 10.96697568 10.17306508 2.37506724 TCGA-A7-A3RF 79 0 NA 408 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA NA mucinous carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 2 2 NA NA 1 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.029022e-06 5.006051e-07 12.473680 1.029276 7.292930 11.553974 -0.555757 9.531106 -1.555545 9.320824 11.668007 10.134741 10.028329 7.386821 9.722756 9.813904 8.693420 7.872667 11.774103 9.372085 4.836626 1.029276 10.370232 11.957911 13.246520 8.047933 9.648878 10.428725 3.692237 9.052561 NA 1.251689 6.258087 10.769331 13.424089 7.192499 9.505678 12.331146 9.205858 7.130807 4.059018 6.185773 7.424446 6.983466 5.944153 13.644362 1.029276 8.741223 15.149939 NA 10.133261 11.311006 3.836621 8.567135 -1.555545 14.142920 10.870309 3.573593 8.507701 NA 3.936157 9.432991 8.826930 9.847319 8.776343 9.348941 10.166687 1.903732 11.128178 10.398139 6.832324 7.209178 14.093759 10.391578 15.846436 8.097636 11.034660 10.706695 6.488701 1.766214 8.042359 7.706401 7.806251 9.408647 NA 4.302290 8.630421 8.706401 10.500605 2.766235 2.766235 4.116731 9.848916 11.425339 -1.555545 13.327284 6.432991 7.144746 10.780534 8.788603 11.904890 9.151666 10.823414 10.239129 10.210007 10.889063 4.784158 8.907831 11.198985 12.240042 1.766214 10.325038 8.207519 2.144732 2.447897 9.529779 10.768206 9.500944 8.461115 14.788949 10.819617 8.626701 6.192500 3.444309 15.302300 3.653759 10.293712 9.852636 10.297226 9.284298 7.151666 10.722913 0.00055459 0.00055459 -0.01917700 0.00291330 0.00147530 -0.01133500 0.00666530 0.00083195 0.00083195 -0.00078398 -0.00078398 -0.00027724 -0.00110870 -0.80923000 0.00332990 0.00332990 0.00332990 0.00041593 0.00041593 -0.00346270 -0.00774820 0.00000000 0.00332990 0.00332990 0.00332990 0.00388540 0.00388540 0.00388540 -0.00069303 0.00055459 0.00055459 -0.00124730 0.00291330 -0.01133500 -0.01133500 0.00666530 0.00666530 0.00083195 0.00083195 0.00083195 -0.00567570 -0.00567570 -0.01952500 -0.00747200 -0.00747200 -0.00747200 -0.00747200 0.00097064 0.00805670 -0.00137270 0.00332990 0.00041593 0.00041593 0.00041593 -0.00346270 -0.00774820 -0.00949930 0.00138680 -0.00041585 0.00332990 0.00777830 0.00388540 0.00388540 -0.00083160 -0.00802400 0.00805670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.70640070 11.72768434 2.90373245 8.83555022 2.76479199 11.32866786 0.44434902 NA 8.51978562 8.63536588 NA 6.16540550 -1.55554495 10.27164919 9.09266413 2.25165851 5.32695074 8.18408735 12.82002477 11.45063263 9.59083066 6.81499383 12.16700736 1.44429601 10.17689793 10.16668720 1.90373245 NA 11.26268901 2.14473165 12.84184747 12.84478576 6.26448576 10.42408901 7.61923252 9.61485760 5.39850429 8.60669798 -0.55575701 1.76621350 9.74523094 11.17795746 9.31235727 -1.55554495 10.81698386 9.61985608 10.17052475 4.69223189 9.34894122 NA 13.19339031 2.02927618 9.47221257 9.37164750 7.93102112 0.02927618 8.57230080 7.86004841 11.90271314 1.61423868 13.91229410 1.02927618 11.54677439 NA 8.16711402 4.67312672 7.16540550 10.12158571 12.737093 3.614227 8.907831 9.505678 10.307718 10.717519 13.644362 12.492112 8.872667 9.808441 11.743944 12.050827 7.806251 10.594371 -1.555545 6.766235 10.467714 10.8571409 9.2708550 8.4086473 9.2427783 7.4968745 10.1436620 4.5940528 5.4215869 8.0479331 8.8632134 NA 6.8579350 6.5575280 9.8758042 9.5009442 8.5291150 10.0400302 6.3022880 1.7662135 9.8473186 11.0944607 11.3908474 9.8867317 10.4393669 8.8160832 0.7662135 9.7099216 7.8536975 2.9037324 10.5006055 5.3868213 11.5280916 9.8489160 6.3269489 14.0912303 10.8141764 10.2464189 12.1612332 9.8679477 9.1034106 NA TCGA-A7-A425 70 0 NA 447 breast stage iiic t3 n3a mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 12 white not hispanic or latino 255.29.0 NA NA 3 2 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 8.343418e-08 11.2348883 8.4798397 7.0409231 11.6494425 3.1651402 9.0604457 0.1062143 8.8755365 11.4845443 11.7206526 9.1794984 7.6219493 8.7704006 9.4703841 7.9178918 8.6748391 10.9608582 9.3557581 7.6166841 4.6710329 11.9013421 11.0360010 10.6786339 11.3462457 8.7452888 10.4751196 4.8788381 9.4855774 0.1062143 1.1062813 8.2077875 11.5863665 11.5580582 6.7880736 12.6795022 13.3914109 10.6899591 6.4221539 3.4281826 7.1759227 8.1081266 9.9480759 7.6557132 12.6390112 0.5212518 10.6304647 13.6109030 6.4638023 10.2192145 10.4123112 9.7049224 5.2077875 1.5213021 14.6635921 12.9597540 3.5212895 7.7950825 1.1062813 3.1651402 9.5927493 10.3529901 9.4431280 10.7132715 9.2398200 9.8130332 2.9807200 10.6454083 10.8006074 7.6505700 8.3541771 5.4161033 11.4669137 14.6569362 9.2136496 10.7576002 9.5974345 7.2042816 1.6912215 3.0448487 7.4069830 7.3667768 11.5372247 NA 3.2217224 7.7763152 9.7927500 10.0151424 6.4638023 5.0911413 5.1506450 9.2415313 11.6893323 5.2627526 13.7154282 6.2894712 7.1937126 11.3034662 11.4215878 12.0617783 8.0777931 10.9776414 10.0295770 9.9285548 10.8213535 3.1062478 9.8250677 10.3136707 9.3494234 NA 10.4191324 7.8544421 1.5213021 4.1971026 8.5380954 10.5081956 9.2269193 8.7061624 14.8319885 10.4568204 7.7036814 9.5927493 2.8432201 15.8479886 9.5940896 12.3574360 12.1725630 9.8147587 10.2715753 7.0643192 11.0758975 -0.0115880 1.4339000 1.4428000 0.4737500 -0.0302670 -0.0274540 0.9565200 0.4817200 0.4650200 -0.0305400 -0.0305400 -0.0305400 -0.0165670 -0.0165670 0.4179800 1.5045000 -0.0612860 0.4703200 0.4703200 -0.0226060 -0.0105080 -0.0066432 -0.0020784 -0.0020784 -0.0020784 0.0132130 0.0132130 0.0132130 0.4945900 -0.0115880 -0.0115880 0.0000000 0.4737500 -0.0109220 -0.0274540 0.9565200 0.9565200 0.4817200 0.4650200 0.4650200 0.4643400 0.4643400 -0.0305400 0.4785600 0.4785600 0.4785600 0.4785600 -0.0165670 -0.0165670 0.4179800 -0.0816070 0.4703200 0.4703200 0.4844000 -0.0226060 -0.0105080 -0.0181430 -0.0140900 -0.0020784 -0.0020784 -0.0128510 0.0132130 0.0132130 0.4945900 -0.0151890 -0.0388840 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.401 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.401 8.8832307 12.9874910 4.9642323 10.7974114 3.6289719 12.1332339 2.2217224 3.0448487 9.6962126 9.2803430 -0.4787482 7.6290272 5.3157039 9.2894714 9.8854217 2.7692216 8.7997365 8.7763156 11.1237539 11.0066132 9.7449208 6.9683707 11.8429333 3.5656825 9.0030864 9.8130332 5.4401516 1.5213021 10.8227832 2.6087383 12.7797794 12.1661572 7.2795103 9.7833818 8.1415069 9.7398503 2.1062478 -1.4787482 NA 3.6505693 9.5450413 11.0035908 9.5035676 6.7974112 8.7791934 8.5170540 10.0633515 5.4520254 9.3502168 -1.4787482 12.0555899 3.5656825 4.4985700 9.1370270 5.4822158 3.3792744 10.1700939 8.5914079 7.3124501 2.9807200 13.7202308 0.1062143 11.1020166 NA 6.2007672 5.4401516 7.3414663 8.1777120 12.751177 5.852204 8.058505 12.679502 9.955394 10.896598 12.639011 11.779117 8.965422 9.875536 13.339520 10.782500 7.366777 8.547810 4.165140 7.083529 10.579955 11.3951156 7.7135797 8.2644384 8.8533236 8.1705430 11.2245028 7.4161050 9.7061624 11.3462457 7.1249133 1.5213021 8.1972442 8.3142887 10.1020166 10.6268682 7.7404554 10.1786055 9.6930893 4.9306758 9.4431280 10.4352983 11.4774816 10.6937145 10.8821341 7.7476989 0.8431799 9.9494064 6.8386997 5.3541771 10.0151424 5.1937126 11.2763039 9.2415313 6.5212863 13.3348678 10.1006029 9.9533069 12.4384726 11.0497411 9.9944854 1.9807200 TCGA-A7-A426 50 0 NA 364 breast stage iiic t3 n3a mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 13 white not hispanic or latino 255.29.0 NA NA 2 2 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.668684e-07 10.9763477 9.0906481 6.1994486 11.8253371 2.6090221 9.6736525 -1.8504805 8.6414535 11.4923698 10.6877895 9.8127138 8.0276517 9.1117737 9.9633818 7.3344762 8.8158245 10.8798584 9.4344247 7.7988567 3.3195312 12.6942632 10.9783321 11.1828515 10.4078722 9.3802216 10.4049243 6.0383440 10.0557396 1.7345687 1.7345687 8.0215058 12.6182246 12.8943819 7.7952591 12.4334124 12.9247479 10.8131587 7.4894506 3.4715257 8.0684639 8.7457903 10.3298206 8.0729279 12.3242143 1.4715517 11.4734998 13.8071982 7.0921154 10.0654650 10.5909886 8.8448288 7.1297405 0.9569488 13.9579623 11.8851566 1.4715517 8.2489484 -0.8504805 4.7194573 9.7298591 9.3031526 10.1618760 11.2329137 9.0466897 10.3129358 5.8361009 10.5826644 10.9882137 8.1211439 7.8378512 12.5306703 11.2469744 14.5816205 8.3883514 10.4442214 9.8028935 7.7661492 2.4715257 5.7420574 8.4568012 7.9044883 11.9616776 -1.8504805 2.2370742 7.8078121 10.1639699 10.6245740 7.8604073 5.7194573 3.7345579 9.5142825 11.9166470 3.1939925 13.3496179 6.0564903 7.9809079 12.5351260 12.0380585 12.6427055 8.4361585 10.4835945 10.5010920 10.6885170 11.0126253 4.9697814 9.6334163 11.3686178 10.4289210 0.4715517 10.5104477 8.9919509 2.3195312 5.0340748 9.0021301 10.8374136 10.0572424 8.4972219 14.6653779 10.6230527 9.1524157 9.1830237 4.0322419 14.4843453 10.1754323 13.6136677 13.0902812 10.0095235 10.4977755 7.7952591 10.4670132 0.00680440 0.40928000 0.42688000 0.00000000 0.00000000 0.00152550 -0.00512270 0.00416320 -0.42767000 0.45309000 0.45309000 0.45309000 0.00583090 0.00583090 0.00610900 0.00610900 0.00610900 -0.00857660 -0.00857660 -0.02903800 0.00013863 0.00541390 -0.07947600 -0.38739000 0.08796900 0.01209700 0.01209700 0.01209700 0.00027728 0.00680440 0.00680440 -0.00360110 0.00000000 0.00152550 -0.00097033 -0.00512270 -0.00138580 0.00416320 -0.42767000 -0.42767000 -0.00180140 -0.00180140 -0.42702000 0.00249690 0.00249690 0.00249690 0.00249690 0.00583090 0.00583090 0.00610900 -0.00110230 -0.00857660 0.40144000 -0.01700800 -0.02903800 0.00013863 -0.00465050 -0.43680000 -0.07947600 -0.38739000 0.00055459 0.01209700 0.01209700 0.00027728 0.00346870 -0.41652000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.010 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.010 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 9.1726618 13.3909507 5.5842289 10.5721911 3.7203660 10.9779355 4.4350018 1.6090457 9.1608279 9.5483443 0.1496496 8.1411226 5.3687683 9.5831860 10.2260822 3.7643143 9.3201516 9.3350955 9.7794126 11.0596812 9.8014685 7.5289791 11.4281953 2.8500393 10.1407680 10.3129358 5.8149374 0.1496496 10.6524324 5.3492733 13.0950444 12.0108814 8.1254486 9.7916523 9.0199654 9.4447956 4.4894530 -0.8504805 NA 4.8638443 9.5413813 10.4751871 9.6202594 7.4046290 8.8257427 8.3170186 10.2779172 5.3094709 9.8162685 0.9569488 11.9792242 3.9044841 5.4442198 9.3269081 6.4622110 5.6414535 10.4827559 8.9119827 8.2775947 0.1496496 13.7669820 1.9569488 10.6434561 NA 8.0122379 7.0654797 7.2633424 8.8317173 12.4835966 4.8500393 8.4704010 12.4334124 10.5624351 10.4468034 12.3242143 12.0003735 9.1309466 10.2456568 12.8064165 11.3052094 7.9044883 8.4670133 0.1496496 7.7495135 10.6697281 11.236898 5.425724 8.472656 9.405809 6.963382 10.593958 7.252889 9.039105 10.407872 7.641454 1.149585 8.727973 6.635268 10.310102 10.429791 8.013787 9.901981 9.947667 6.160827 10.161876 10.703710 10.830839 10.769820 10.465882 7.907824 -1.850480 9.750689 6.692632 7.623306 10.624574 5.829081 11.178543 9.514282 6.511544 14.184936 10.147486 10.414336 12.023525 11.306790 10.121144 1.319502 TCGA-A7-A4SA 40 0 NA 454 breast stage iib t2 n1a m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 1 white not hispanic or latino 271.28.0 NA NA 4 5 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 1.474004e-06 5.284165e-07 10.6381745 7.8663337 7.4861158 11.8333455 1.4637271 9.7173592 0.1418251 9.5806119 11.6493669 9.7574497 9.3597777 6.9683684 8.2991668 9.8841295 7.7454464 9.6634204 9.8142453 9.5981744 7.6887147 3.5341363 11.5012951 10.1361734 10.1786804 10.7064459 8.7211361 10.0267537 7.8491793 9.6770954 0.7267440 1.7267876 8.6396717 11.5659863 12.0817665 6.8071565 13.5112811 12.7584837 9.6236194 5.8283193 0.7267440 6.9362363 8.4272223 10.7973507 8.2319325 12.6512239 1.7267876 10.3992078 13.4520068 5.6336724 9.3520529 10.3760387 9.1276619 4.2711044 -0.8583056 14.1838863 10.1779936 3.2292803 8.6653821 NA 3.7267876 9.5059546 9.1957460 9.5628329 9.6012517 9.7711766 10.2444520 3.2292803 11.7888287 11.0259905 7.6614560 6.9231801 4.5680868 10.4220108 14.6522752 9.2569288 10.5336006 10.6648918 9.6683193 0.1418251 0.1418251 8.9198972 8.4614921 11.9499798 NA 5.0244615 7.2239689 10.1634941 10.1800531 5.6175542 7.1916683 5.5341363 9.5743619 11.9647891 4.7565323 12.9102112 5.3706386 7.3944858 11.7856762 11.6717386 12.6620704 8.8387876 9.5135967 10.0843346 9.8758267 10.5591451 4.8697382 8.9443364 11.4968958 9.2079092 -0.8583056 10.5357467 9.0562052 1.4637271 3.4823837 9.6973678 10.4872253 9.5059546 9.9762910 14.6515023 10.6371754 9.7784447 8.9000432 0.1418251 15.3119994 7.3609884 13.0046511 12.2060575 9.8883343 9.7838717 7.5889035 9.8748354 0.02440800 0.01992300 0.44342000 0.01558700 0.01405100 0.01391100 -0.03079500 -0.01161100 0.00041593 -0.41481000 -0.41481000 0.43952000 0.26726000 -0.40528000 0.01153900 0.01153900 0.01153900 -0.02370300 0.01126100 -0.40628000 0.40561000 0.88486000 0.09277500 0.21699000 0.21699000 0.04471500 0.04471500 0.04471500 0.69279000 -0.41619000 -0.38470000 -0.02013800 -0.40849000 0.01391100 -0.44048000 -0.43040000 0.00791750 -0.01161100 0.00041593 -0.02016500 0.00235810 0.60882000 -0.40937000 -0.40694000 -0.40694000 -0.00581400 -0.00581400 -0.40528000 0.32221000 -0.41267000 -0.39619000 -0.02370300 0.01126100 -0.40329000 -0.40628000 0.31851000 -0.01697900 -0.40760000 -0.42123000 0.21699000 -0.40108000 0.04471500 0.04471500 0.69279000 -0.03081300 -0.02999400 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.124 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.124 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 9.6545605 13.2864783 4.7267822 10.8688896 5.5491732 10.1418200 4.4637467 0.1418251 8.6692972 7.8765298 NA 8.3298403 4.1418170 10.1704168 9.4949668 5.1418210 9.4260657 9.3826113 8.6094255 10.8146873 9.7845306 7.6575200 10.9588037 3.1418251 7.9491748 10.2444520 4.2711044 1.4637271 11.0168014 3.2292803 12.0162251 11.6792811 7.7675290 9.6306643 10.5894199 9.6624387 5.5512115 1.9491614 0.7267440 5.2079085 8.9667788 9.8151292 10.0236988 6.0843343 8.6822580 6.8832872 9.7445189 4.8422598 9.9683686 NA 10.8624918 3.6653814 4.2292803 8.4629590 6.7933744 5.5847641 10.1875797 8.7766311 6.9998005 NA 13.0731116 1.4637271 10.3766375 NA 6.9747106 5.1418210 7.9747100 8.3754396 12.2204779 6.8071565 8.3634072 13.5112811 9.8294932 10.0252271 12.6512239 13.6684415 9.1119259 10.0989220 12.5782713 10.6089160 8.4614921 9.1076042 -0.8583056 7.3609884 11.2880705 11.3915261 6.3609893 8.7192488 8.1446348 5.5680838 10.4873916 8.5889031 8.7002406 10.7064459 6.3706386 1.9491614 7.4637483 7.5258269 11.4395961 10.6180599 7.0244626 8.2890248 10.2877522 7.4993724 9.5628329 10.8265687 11.3733413 10.4507278 10.6471354 8.1641879 0.1418251 9.4966093 7.3266955 6.9935691 10.1800531 5.4993708 11.1648813 9.5743619 7.5125074 13.0812156 9.5899363 9.8195397 12.3541644 10.9394816 9.5774902 2.1418251 TCGA-A7-A4SB 56 0 NA 418 breast stage iiia t3 n1mi m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA 1 2 NA NA 1 3 2 3 3 2 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.112456e-07 10.7898753 7.5202808 7.4223550 11.7562952 0.1983684 9.4078063 NA 9.4756404 11.2430886 8.4975609 10.5219707 7.2805017 9.9271239 8.9862556 9.6392220 8.5448667 11.2307431 10.3140468 7.0625395 NA 12.7036683 10.0787018 10.8024428 11.8857286 8.5315082 10.3442850 4.0563321 10.7577300 NA 1.1983684 7.4078065 11.5440354 13.0624423 5.6577858 13.7467534 13.3884863 9.6402596 6.5559051 2.3682655 6.4175218 8.8511978 9.4307739 6.3379037 12.9058199 0.1983684 10.6480175 13.9728312 4.3682795 9.5180703 10.3801264 7.9228668 4.7833152 -0.8016316 13.1199103 8.6329810 -0.8016316 7.5292697 NA 4.3682795 9.0185318 10.9603196 9.4952692 10.2393275 9.9739632 9.8547779 6.1408666 11.2262589 10.7287593 6.3068783 6.7757815 12.3277970 12.0808049 14.1380699 8.4116275 10.1283510 10.9232931 9.2109774 2.1983684 0.7833309 8.2937498 8.0501022 9.5613926 -0.8016316 3.0057054 7.6034943 10.1905833 10.1276114 5.0563321 4.4462827 4.9532420 10.0524421 12.2558371 3.1052423 13.7149148 5.8707790 8.1612488 12.8361099 10.6972022 12.5701296 8.9125984 10.6061518 10.4616222 10.3055700 10.6387031 4.5906679 9.0024840 11.6572721 12.6654490 3.7833204 10.1919989 8.7605952 -0.8016316 4.4124767 8.8038324 9.6547073 10.3912622 8.4004769 15.1830384 10.9939868 9.4872190 9.7889400 1.5202965 15.4673152 6.2644426 13.0236099 12.0155365 10.3682779 9.5981649 7.9632244 10.1722368 0.0171240 0.9587700 0.9733700 -0.0022168 -0.0154660 0.4780400 0.5089800 -0.0142280 -0.0246200 -0.0012473 -0.0012473 -0.0012473 -0.5066000 1.3092000 0.0157270 3.6569000 3.6569000 0.4801800 0.4801800 -0.0118870 -0.5077300 0.0000000 -0.4754300 0.3759400 0.3759400 -0.0060904 -0.0060904 -0.0060904 0.0533790 0.0171240 0.0171240 -0.0012473 -0.0154660 0.4780400 0.4780400 -1.0539000 0.4849200 -0.0142280 -0.0142280 -0.0246200 0.4881300 0.4881300 -0.0012473 -0.5022500 -0.5192500 -0.4948200 -0.4948200 -0.5019400 -0.4784900 0.0175440 -1.0375000 0.4801800 0.4983900 0.4983900 -0.0118870 -0.5077300 0.0091705 -0.4782800 -0.4754300 0.3759400 -0.5038000 -0.0060904 -0.0060904 0.0533790 0.5089800 -0.4767000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.499 -0.499 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.470 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.499 -0.499 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.470 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 7.2372721 11.6882009 9.1983530 9.7982657 3.9532373 11.3493695 0.1983684 NA 9.1813466 7.2095801 NA 7.1583552 2.1983684 9.8987927 9.7355714 6.0438432 8.6098639 9.6267131 8.5202812 10.1806335 10.2203254 8.1320437 10.8931461 1.5202965 8.7510221 9.8547779 4.9262746 NA 10.8286201 2.6577772 10.9536578 11.7297344 7.3582239 10.1481796 7.9532402 9.5874464 3.8422045 -0.8016316 1.5202965 2.0057233 8.8258867 9.7179893 10.2214142 5.4462794 9.4844949 7.7644072 9.9952037 4.9797144 9.7710531 NA 10.6480175 2.7833100 4.7219140 9.9130192 6.9148635 4.0057054 8.7510221 8.7889401 8.3682781 0.1983684 13.7402965 NA 10.5292698 -0.8016316 6.7982657 5.9532396 8.4150986 7.4367573 16.653416 7.594958 8.781436 13.746753 9.958241 10.577731 12.905820 12.550534 13.124659 10.337265 12.847609 9.890968 8.050102 8.659833 NA 7.670028 11.382608 10.3900291 6.8056833 8.4814414 8.4053674 8.5021337 9.6072452 5.0563321 5.7682081 11.8857286 7.9698424 NA 7.0687181 8.0249014 11.5340224 9.6140947 6.7982657 9.6991949 8.8404047 4.4078082 9.4952692 9.9305203 12.0704506 10.7051564 9.7258299 6.7757815 NA 8.8989139 5.9398190 5.8848543 10.1276114 5.3276371 11.1644979 10.0524421 6.5733927 13.3661631 9.6811609 9.1684588 12.4000174 11.0640862 9.4580963 0.7833309 TCGA-A7-A4SC 62 0 NA 446 breast stage iib t3 n0 mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA NA 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.946798e-07 11.1590590 8.8047754 6.9530557 11.6076083 3.2048606 9.6227152 0.2048919 9.6866621 11.5613147 13.1853593 10.3571475 7.9259620 9.3722809 9.6046746 7.2104873 9.5635140 11.2424096 9.0890333 7.7478942 2.0122111 11.4725272 10.8033805 9.7440215 11.3331793 9.3302763 10.1244710 6.5357793 10.1057219 1.2048919 2.2048606 8.3315673 11.9605849 12.1840271 7.8158873 14.3806461 12.0383458 9.6384482 7.3897380 4.4902620 6.8701982 8.4786584 9.7116661 7.4716492 12.3994657 2.0122111 9.6153140 12.8839029 7.8414876 9.0573455 11.1963846 8.9713915 3.7284212 NA 13.5011258 8.9344835 5.2048645 8.6142538 0.7898544 4.2923253 10.2355299 10.4977594 9.2118900 10.5869463 10.6886785 9.8451077 2.6643008 11.5651611 10.9964326 6.8983499 8.8878573 2.0122111 9.2104873 14.6353153 8.5767481 11.3763523 11.2216710 7.7478942 2.5267950 5.8342182 9.8232483 8.5864056 12.2886744 NA 4.1117491 7.4432677 9.2989403 10.3192557 4.8195711 6.0503537 4.5971795 10.4698917 11.7464434 2.5267950 13.8352436 4.6642951 7.4240310 13.0499607 13.9545227 12.8339916 8.5132017 9.7935773 10.6876707 10.4357478 10.9467510 5.2272289 7.8010526 11.2756545 12.5545586 NA 10.5891068 8.6457319 2.5267950 3.8492988 9.2642071 10.5006317 9.4264499 9.3068384 14.6206705 10.3653645 9.4681320 8.8214114 2.7898336 15.3547289 10.7474110 15.1250760 12.8242803 10.4954576 9.4240313 8.1907047 11.5062103 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0361700 13.3764305 6.5447126 10.3068383 4.9053028 10.9899064 3.5267950 NA 8.8966061 7.9730470 NA 8.2808765 4.6967172 9.6110678 9.9605848 2.6643008 10.4698917 10.2709519 10.9821180 9.5820733 10.3746562 7.9496966 11.2427528 3.5267950 9.9935811 9.8451077 4.9053028 NA 10.8653043 4.9597516 12.0844459 11.9649589 7.9664137 10.1267037 7.8948608 9.4960335 7.5535909 0.2048919 2.3747891 0.7898544 8.9208247 9.4167511 10.6509121 6.0996802 10.2677386 6.9327829 9.7037119 6.9191076 9.2923255 -0.7951081 12.1799942 3.2923253 5.3341463 9.3611354 6.7444087 4.4902620 9.1102497 7.8983499 5.7440211 0.7898544 12.8111522 1.5267700 10.3068383 NA 7.8451074 6.4622503 7.2048626 8.2763250 14.424075 5.313387 8.364734 14.380646 10.365995 10.983351 12.399466 11.551930 9.155973 11.237253 13.781996 11.461956 8.586406 8.040913 1.204892 6.999278 11.246864 11.5346590 6.1590600 8.4902649 8.8559143 7.7047088 10.3543876 7.6142534 6.9327829 11.3331793 7.8983499 0.7898544 5.3546108 6.9897589 12.1460938 10.5296059 8.0472128 8.4480366 11.5936872 5.4527898 9.2118900 10.2729691 11.5228405 10.6200763 10.9972463 9.0250415 NA 10.5296002 7.9496966 6.4240319 10.3192557 6.3341463 11.0357740 10.4698917 7.2655588 12.8899400 9.0202460 10.5982532 13.1671261 11.0409130 10.1949667 2.5267950 TCGA-A7-A4SD 52 0 NA 441 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 271.28.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.065304e-07 3.059253e-07 12.528808807 0.577730931 6.600134435 11.961471291 NA 9.495636208 NA 9.415920457 11.349256456 9.496630317 9.313605029 7.264267120 9.669643175 10.456839613 6.713903352 8.908683833 11.034805839 10.391548210 8.770881561 5.935318300 11.426650697 12.924373060 13.639981819 10.716891980 9.097403268 10.240138633 7.504556836 10.794916905 NA -1.007231569 7.926495260 11.046391061 12.586429059 7.406432076 12.324980953 11.468537906 10.575416906 6.152676269 4.452233002 7.902697687 8.167730236 10.114985369 8.649229228 5.058892246 -0.007231569 11.438853904 9.666996725 9.827275530 9.905177430 10.637111448 6.202257065 6.893671639 3.636659419 15.898379773 12.882280897 -1.007231569 7.380822072 0.992768431 6.964347800 9.743511434 11.124661446 9.057547207 9.191249504 10.293729012 10.746439077 0.577730931 10.918729767 11.785188100 5.468537703 8.314732774 4.992804679 5.636659419 15.303115503 8.055120259 10.972229677 10.771292365 10.061582754 2.992804679 NA 7.998429087 9.152675762 11.277339480 -1.007231569 3.800154423 8.638463066 10.544032077 8.627615592 8.155195691 7.427432697 6.806585709 9.322600820 11.649229363 2.162725653 13.311064845 5.202257065 6.819352687 11.336267820 12.604059876 12.741940672 7.926495260 9.864709723 10.903447240 10.767817979 11.429255768 5.435748591 8.631240366 11.915388914 6.700163638 NA 11.031380584 9.482652488 1.800164779 4.223159937 9.531963295 11.349256456 10.426389937 9.240731954 14.478979601 10.266017328 9.566451771 6.734272004 4.240734100 12.516121400 7.700163638 13.151808567 12.690532290 10.348155609 9.808187774 7.853891507 10.858383121 0.34809 0.72090 0.18115 0.72648 0.76789 -0.61480 1.90060 1.18280 0.81569 0.28800 0.28800 0.28800 1.14050 -0.18812 0.32686 -0.13318 -0.13692 1.00280 -0.14710 0.49330 -0.24358 -0.20972 -0.16512 -0.16512 0.30551 -0.17906 1.04760 0.76386 0.78039 0.28388 0.34809 0.00000 -0.17527 -0.63870 -0.61846 -0.63775 -0.15031 0.78811 0.34123 0.30623 0.28673 -0.10974 0.20736 0.52833 0.52833 -0.26818 -0.23913 -0.83713 -0.67216 -0.56943 -0.13692 1.14070 -0.14710 -0.17337 -0.28673 -0.23510 -0.19438 0.69500 -0.16512 -0.15492 0.18690 -0.57734 0.76386 0.76042 -0.61519 -0.20049 0.039 -0.179 0.190 -0.137 0.843 -0.160 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.750 0.750 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 0.351 0.039 -0.179 0.190 -0.137 0.843 -0.160 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.750 0.750 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 0.351 8.568343783 13.737112787 0.577730931 9.312476630 4.665227889 11.810787420 NA 2.693252762 9.362401943 10.080930221 -0.007231569 7.796935781 5.240730285 10.329868863 9.379744843 1.992804679 6.172713519 9.193703007 7.570233697 9.431596427 8.395390180 8.350356684 12.022436825 -1.007231569 8.672284602 10.746439077 1.992804679 -1.007231569 9.814578461 0.577730931 11.849619065 13.467524447 7.197375946 9.936051909 11.129154843 10.434711201 5.863170328 3.385127280 -1.007231569 4.850784424 8.847672827 9.116925861 8.772523745 2.162725653 11.136465124 6.800159601 9.592717334 5.760990001 9.524185944 0.992768431 12.152202848 4.800159601 4.080265388 9.142449944 6.963485684 8.727514129 9.512440833 7.402195189 10.282823294 4.080265388 12.837608323 NA 11.220119575 NA 8.819353007 4.162725653 8.088201503 7.480644814 12.160310 9.134912 7.468538 12.324981 10.396882 10.797339 5.058892 6.952806 9.039929 11.290867 14.012265 11.901385 9.152676 7.226424 4.636659 8.122088 10.480142 11.027260 2.314726 9.758505 8.512441 8.770882 9.833047 8.042653 5.838294 10.716892 11.793907 6.734272 5.577767 10.290976 11.912413 10.381898 7.984326 8.085562 9.401134 7.581519 9.057547 10.100675 11.605443 11.415395 10.796532 8.908684 NA 9.852999 7.078516 10.024161 8.627616 7.296585 10.548832 9.322601 7.926495 13.531600 10.853504 10.659028 13.811586 10.806986 9.037199 5.182629 TCGA-A7-A4SE 54 0 NA 644 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 271.28.0 NA NA 4 1 NA NA 2 5 2 6 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.835552e-06 4.171709e-07 11.646646 7.131243 6.570226 12.043757 0.230326 9.635518 NA 8.941183 10.902802 9.959147 9.511147 8.184573 9.559051 10.759319 7.333664 9.243001 8.563532 10.037731 9.637644 5.113021 10.641887 11.459496 11.871977 10.226850 9.045760 10.413391 5.420199 10.363519 5.738171 1.552328 8.499503 13.031175 12.431122 7.706110 11.720475 11.540705 10.826100 7.280225 4.274769 9.191826 7.088357 8.605416 8.946338 7.236001 NA 11.546941 8.596699 9.207656 10.392585 11.024792 8.385195 4.985264 -0.769551 14.372457 10.654018 3.622696 9.916877 0.230326 6.252745 9.939460 11.194717 9.231784 9.840478 9.797382 10.814399 2.037734 10.904127 11.505046 5.338902 6.614081 4.137266 8.359660 15.224111 8.200482 10.632856 10.636050 9.371206 3.815340 -0.769551 9.137267 9.161114 9.728228 NA 5.722228 8.146256 11.124815 10.410907 6.596698 5.359658 6.359660 8.603241 11.714696 2.400292 13.315766 4.845089 6.937735 12.720600 13.358935 12.859847 8.288368 11.154447 11.446516 10.533164 10.855629 4.587929 9.459195 10.673320 9.528439 1.815329 10.415871 9.190378 2.930813 4.809615 9.325773 12.356435 9.905451 9.901917 14.333623 10.349966 9.320489 7.881428 2.037734 11.394026 8.991928 13.319661 12.380758 9.853343 11.201561 7.323133 11.079758 0.400110 2.218700 1.039600 0.642490 0.472380 -0.372450 -0.388730 0.776560 0.426620 -0.396420 -0.396420 0.782670 -0.387160 -0.374930 1.097500 0.338530 -0.363400 0.385510 -0.348360 -0.057520 -0.371320 1.163400 -0.250230 -0.250230 -0.211310 0.562940 1.464600 -0.410030 0.802860 -0.799120 0.402110 -0.389730 -0.347100 0.502030 -0.430900 -0.388730 -0.390740 -0.819740 0.431930 0.411110 0.337230 0.468320 -0.368630 0.698770 -0.079077 -0.053206 -0.138710 -0.374930 -0.376200 0.267650 -0.367270 0.392630 -0.348360 -0.348360 -0.084323 -0.376620 -0.371780 -0.359650 -0.250230 -0.250230 -0.789920 -0.425170 -0.388060 -0.358680 0.162350 0.321090 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.250 -0.250 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.250 -0.250 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 8.387723 14.192143 4.622696 10.243699 3.686523 12.268095 3.815340 7.819091 9.685703 11.165910 8.946338 10.163838 5.515779 10.624303 9.885907 4.784965 8.520395 9.632322 8.056925 8.015011 9.929168 7.285658 11.923210 0.230326 7.807805 10.814399 6.024792 0.230326 10.276818 4.515776 11.541557 11.184573 8.224730 10.010096 10.764193 10.122919 4.622696 3.317839 NA NA 8.897488 9.074298 6.579105 5.552303 7.713305 6.420201 10.312525 4.088354 9.193272 1.815329 12.251183 3.985264 4.689808 10.628901 6.994651 2.815329 9.538715 7.552305 4.689808 6.449545 13.634254 0.230326 10.787840 NA 8.883221 4.137266 8.835856 7.024792 13.066670 9.023167 7.596699 11.720475 10.121401 10.710157 7.236001 12.312692 8.415252 10.743117 14.955290 12.395911 9.161114 8.236001 3.037734 7.930816 10.999801 11.634187 4.088354 9.039340 8.813459 7.125194 10.353049 7.395283 5.113021 10.226850 10.960422 2.552303 10.043356 8.641782 11.762732 9.396539 6.263799 9.504172 8.695943 5.622693 9.231784 9.981083 11.710662 12.065045 10.891264 8.579104 NA 9.235636 8.815339 4.784965 10.410907 7.444695 10.772925 8.603241 8.122828 13.884565 9.309861 10.064847 11.988391 11.017054 9.530729 1.552328 TCGA-A7-A4SF 54 0 NA 545 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 271.28.0 NA NA 1 3 NA NA 1 2 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1.362758e-06 6.118507e-07 12.0063454 4.2015319 8.2656600 11.7093245 NA 8.2966873 0.7420925 9.1272417 11.3690241 11.5357016 9.0564928 7.9417707 7.8541035 10.0774887 7.0937735 9.8206939 9.6816775 10.1836592 5.2445979 2.3270550 11.0819483 8.2551679 14.7451183 11.1408420 8.0967152 10.5435373 6.3955410 9.5770959 -0.8429563 NA 6.4969864 9.1401293 11.2498929 6.1571367 15.1290385 12.6314755 7.8117716 3.9120271 -0.8429563 5.0640249 7.8260209 9.6757889 5.6806985 12.2302732 NA 9.4734174 13.2666400 0.7420925 10.1287440 10.5229114 7.8679422 5.9515505 1.1571084 13.4024248 8.4285989 NA 9.2617346 -0.8429563 1.9644726 9.6479867 10.3401508 9.4250929 10.2001631 9.7439755 9.7231898 2.9644911 11.5155122 10.7704649 4.5146904 7.6688885 10.3075178 10.6860782 14.2595626 6.4378136 11.0378672 10.2386192 9.0336526 2.6165694 4.7420979 5.2445979 7.4192304 10.4014996 NA 4.1571327 7.3665889 10.0010568 10.9564174 7.9836845 5.7718460 6.4517568 9.1069625 11.8191365 5.7570499 13.1732476 6.4517568 5.3665880 10.2564836 12.3684157 12.5068317 8.8260209 11.4849691 9.8189138 9.7298360 10.4074342 4.6806957 9.4402241 10.4303486 10.9608633 NA 9.6875421 8.3568080 -0.8429563 4.0161130 8.9302749 10.7083634 9.3081524 9.2577982 14.2742512 10.5681171 9.4700188 7.5408402 1.1571084 14.0358094 7.3617070 11.9725191 11.2442671 10.2238977 10.0435945 7.2498928 10.6265232 -0.5989600 0.1238800 0.7205100 -0.5671500 -0.5204100 -0.4906800 0.7220600 0.2151400 0.2151400 -0.5156800 -0.4856500 0.1860100 0.5182100 0.0000000 0.0555150 -0.0408880 1.0680000 0.2193100 3.6569000 -0.5195000 0.0572260 -0.5542700 -0.4004800 3.6569000 3.6569000 -0.5977900 -0.0687970 -0.0687970 1.7412000 -0.6556600 -0.5989600 0.0342140 -0.5338900 0.0972790 -0.4906800 0.1898000 0.7788700 0.2151400 0.2151400 0.0395220 0.5374900 0.5553800 -0.5386500 -0.3327200 -0.3327200 -0.3327200 -0.3327200 0.0000000 0.0000000 0.0303030 -1.1139000 0.2193100 -0.3077200 -0.3077200 -0.5258300 0.0304670 0.5788000 0.0318590 -0.2435000 -0.4546900 -0.5354100 -0.5977900 -0.0687970 0.0094491 0.0963800 -0.5713000 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.519 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.519 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 7.8713810 12.0399698 6.8644945 8.3738818 3.4254190 11.6283029 3.4050666 NA 9.6499905 4.9644911 NA 6.5494536 1.4790753 10.4722854 9.0923007 6.3665897 7.6688885 8.7955718 7.2656600 11.9141090 10.1007568 7.5146880 9.1286793 1.4790753 9.2259140 9.7231898 2.4790753 NA 10.6514914 0.7420925 11.5179829 11.9462618 6.4332599 9.7718456 7.8644951 10.2922037 6.5234585 1.1571084 0.1571731 3.9120271 9.0489195 9.6698763 9.6777545 0.7420925 10.2026020 8.5014316 10.2252423 5.0878744 10.0610177 NA 10.4198179 3.1571407 3.6806957 10.4257596 7.5688165 4.6806957 8.4402243 7.1905586 7.3518924 NA 12.6765263 NA 11.0823193 NA 7.2708784 3.4790624 7.6962943 6.2232256 13.068715 6.951552 8.806392 15.129039 9.650991 10.652991 12.230273 10.593327 10.136561 10.382946 12.163462 8.941771 7.419230 9.826021 2.157141 10.543537 11.134416 11.113149 7.157136 8.395541 6.376304 8.732921 10.603444 7.070025 4.857578 11.140842 5.286419 1.157108 1.964473 9.373748 8.137276 9.038250 4.442539 9.541920 10.018223 5.951550 9.425093 10.464337 10.567587 9.528912 10.363540 7.371455 NA 8.527649 8.766573 6.223226 10.956417 5.223226 10.799639 9.106963 6.970917 12.346960 9.511385 9.152903 11.458060 11.018610 9.070025 1.964473 TCGA-A7-A56D 84 0 NA 448 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 288.26.0 NA NA 4 NA NA NA 1 2 2 3 3 2 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.1971e-06 8.899646e-07 11.7295617 -0.5829441 4.3238528 10.8092798 NA 7.4448683 NA 7.0463186 9.2162441 9.8835487 8.7723136 6.1034620 7.3238528 10.3704313 6.4393306 7.7478794 8.3682471 9.2194788 5.8263527 5.3711581 10.0499576 11.6849195 12.4764758 10.5597077 7.6067872 9.5705144 5.9247579 9.3417750 NA 2.0019103 7.2113783 8.8157061 11.1542097 7.5513884 12.6815516 12.6941045 10.9083145 6.5462447 -0.5829441 7.4558812 7.1718503 9.8484600 7.3536003 10.6825774 NA 12.5444731 13.8545194 8.2687113 10.6030766 8.4640862 9.3432583 8.2339460 NA 16.7600101 10.0399293 NA 9.2275341 NA 5.4393306 7.1785135 8.9227741 8.0608186 8.5228710 7.6837491 10.4106084 NA 8.2275341 9.4379424 7.5818694 7.6696278 2.0019103 9.6672608 13.9969853 2.4169748 8.7745143 8.6190861 7.0751743 4.5462463 4.8763942 7.1312077 5.7388894 7.5768335 NA 7.0316720 7.1312077 8.7000509 10.2498524 5.1174041 1.7388975 4.9715528 7.9365985 11.2040487 3.9405239 13.2199835 6.4393306 3.5868848 10.8982573 14.6163663 11.0293702 10.0000451 10.8167743 9.9078133 9.3462207 9.0390142 1.0019463 10.2811486 10.6872577 8.7501177 NA 10.1260462 6.9168086 NA -0.5829441 7.5044249 9.2577402 8.2593125 8.3476998 15.9255773 9.2545903 7.4776587 6.8926958 5.1448825 14.1311005 8.7321118 12.1599033 11.0581109 8.6625149 9.4239897 5.6457823 9.1634934 -0.2648200 0.4937700 0.5088000 0.2013600 0.7661800 -0.6210200 0.3810500 0.1094900 0.0922170 0.0695210 0.0695210 0.0695210 0.6108100 -0.1425800 -0.4558700 0.0290390 0.0290390 0.1435400 0.1435400 0.0052704 0.7856200 -0.1323900 -0.6747200 -0.5870600 3.6569000 -0.5075400 0.4417200 0.1857700 3.6569000 -0.6253200 -0.2648200 -0.4260400 -0.6367100 -0.6210200 -0.6210200 -0.3896800 -0.3898500 0.1094900 0.0922170 0.0922170 0.7949000 -0.0380380 -0.6366700 0.1203400 0.1203400 0.1203400 -0.0290420 -0.1425800 -0.1378100 -0.5425500 -0.6190200 0.1435400 0.1435400 0.1435400 0.0000000 0.7856200 -0.5380500 0.0592180 -0.6800400 -0.5870600 -0.8042700 -0.6117900 -0.1565600 0.7546800 -0.0284960 -0.8101400 0.444 -0.138 -0.456 0.000 0.144 0.144 0.000 0.786 -0.106 -0.096 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.266 0.810 0.810 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.057 -0.324 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 0.444 -0.138 -0.456 0.000 0.144 0.144 0.000 0.786 -0.106 -0.096 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.266 0.810 0.810 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.057 -0.324 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 8.4937778 13.8223033 4.0019283 9.9365986 -0.3566055 11.2648028 2.2243182 NA 9.6373407 8.6409639 NA 6.3827468 4.1718473 10.5705144 8.7138786 3.6648924 6.9405239 7.5307044 9.1634766 12.2132048 8.4281897 6.1448825 10.1130605 1.0019463 6.0608191 10.4106084 NA NA 9.8916823 0.4169478 12.8681735 12.5329814 7.1851470 8.8284732 11.0385564 10.9128174 2.4169748 2.0019103 NA 4.1718473 9.3117801 12.7097154 9.6660759 -0.5829441 8.6291428 10.2186708 8.9007781 5.2749437 8.9599941 NA 9.9868179 1.0019463 3.5044297 10.1337219 5.8263527 6.0316731 10.0390142 8.2530126 11.0933603 2.5868848 13.8870492 NA 11.9732289 NA 5.4169613 4.0019283 7.7963408 8.1174021 13.241069 7.959994 6.940524 12.681552 9.792002 10.813567 10.682577 9.804980 8.761258 9.464086 12.334894 7.765691 5.738889 10.865079 4.224318 10.092919 7.994391 9.711583 4.702364 7.761258 8.249853 6.655368 9.170196 6.596871 7.888637 10.559708 9.353600 1.416948 7.851590 7.836880 8.522871 9.449008 5.546246 11.791459 2.001910 6.299606 8.060819 11.088061 9.883549 9.422587 10.149130 4.626416 7.884568 9.769867 7.520250 6.868173 10.249852 7.765691 10.106087 7.936598 7.376964 14.088116 10.539143 9.264020 11.223915 10.841654 8.606787 3.416961 TCGA-A7-A5ZV 62 0 NA 368 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA yes infiltrating carcinoma nos yes 0 black or african american not hispanic or latino 296.27.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.559858e-06 1.140267e-06 13.3767018 NA 3.1492594 11.2811147 3.0423467 9.9127072 1.3419288 8.3390821 9.5105749 9.5850767 9.0423426 7.8054273 8.8417486 9.7681676 7.1492573 8.1620816 8.6839775 10.5592547 7.8771780 3.6638342 10.4530385 11.0955374 12.3489301 9.9974336 9.6491036 10.2689400 2.5118222 10.1484524 6.1998843 1.6638455 8.1492578 11.4705416 12.2783567 8.8257185 13.0801006 11.4323460 13.1026227 5.7681684 2.9268724 9.0664167 8.4052981 11.2233992 6.3076872 0.3418719 0.3418719 11.3821925 9.5513562 8.0900955 9.8655726 10.0458063 9.7576445 6.3642713 2.6638228 14.4987250 8.6411107 4.8964898 9.3062436 NA 3.2487929 8.3808216 10.5211899 9.0967903 7.3475275 9.6513791 9.8327536 9.3004555 11.0638564 10.2600206 6.2122678 9.5354282 0.9268344 2.3419004 14.2972803 8.0335766 10.2014376 10.2367205 7.1936515 -0.6581281 0.9268344 7.1363186 8.5945683 6.5898309 NA 2.1492594 7.4865607 10.2314067 10.1249010 2.1492594 6.1232627 4.0423467 9.2060888 11.2574088 -0.6581281 12.6512370 5.0967889 4.9566143 10.6273050 14.3269887 11.8873500 9.1117405 11.6564860 9.5610714 9.5969314 9.5981115 4.1492594 8.6086895 11.7555307 9.2029897 NA 10.4859237 9.8810616 1.6638455 4.9788180 8.8237022 7.7470443 9.4903794 10.0875771 15.5485166 11.0072387 9.8936111 8.2517958 10.2222516 11.1552832 7.7597551 13.1527756 12.4438785 8.9785274 8.3808216 5.9268653 10.2490864 0.0080567 1.6128000 0.7488000 0.8643300 0.7883300 -0.0055375 2.6232000 -0.8488300 0.6987700 2.4757000 2.7727000 3.4336000 1.6205000 -0.0110600 0.8356900 3.5171000 0.8215700 1.7064000 -0.0171160 -0.0204470 -0.8100500 -0.0092666 -0.0490190 -0.0490190 0.7177300 0.6384700 -0.0960440 0.6961500 0.8252900 -0.8842600 2.3598000 -0.0662190 -0.8488300 -0.8413100 -0.8479500 -0.8194200 -0.8067500 -0.8654200 -0.0630320 -0.0329960 0.7769500 2.0047000 -0.8424300 0.8500800 -1.2929000 -0.0366740 0.6511700 -0.0110600 -0.0125760 -0.0131270 -0.8205600 1.6902000 -0.0206870 -0.0206870 0.0153080 -0.8238300 -0.8285500 1.7451000 -0.0490190 -0.0490190 -0.8188400 -0.9954800 -0.0960440 -0.9309300 0.0553730 -0.9396100 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.834 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.834 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 7.6365238 13.6672083 -0.6581281 10.6856437 3.3722417 11.7201977 0.9268344 7.6502418 9.3206133 7.4399347 2.5118222 10.0397391 7.4133648 10.1419938 9.7256071 4.9857600 4.1998843 8.3944708 6.5118285 10.9835030 8.3694220 7.4240520 10.3248963 2.5054083 8.1779532 9.8327536 1.3419288 NA 9.6468245 0.3418719 11.5634899 12.7539433 7.6861987 9.6353744 7.7723555 9.7125903 6.4079917 0.9268344 NA 0.3418719 9.4916499 9.6928420 5.3419039 4.9268676 9.9986584 8.6994548 10.3327159 5.3862971 10.8382573 NA 12.7650187 2.9268724 2.8013242 10.3494908 6.8777222 0.3418719 8.2306459 8.2184199 1.6638455 10.4079920 12.9299146 NA 11.9886865 NA 6.7512937 2.1492594 9.0867365 8.5218120 12.8164555 7.7555306 7.9003234 13.0801006 9.6353744 10.7000045 0.3418719 10.1191581 9.2184196 10.9816957 12.7342202 10.9920570 8.5945683 7.4763290 1.9268724 7.9748981 9.4891078 10.758173 3.589835 8.079995 8.010788 8.266715 9.602458 5.956612 7.561071 9.997434 4.149259 3.149259 5.407992 9.317163 11.652800 10.731534 5.149259 8.855630 6.881061 4.248793 9.096790 9.866445 11.253669 9.405298 10.917442 6.768167 5.511829 9.432002 4.768168 2.663823 10.124901 9.612198 10.219187 9.206089 7.455645 14.378291 9.531727 9.829743 12.031246 9.720198 9.909859 1.663846 TCGA-A7-A5ZW 47 0 NA 326 breast stage iia t1c n1a m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 305.23.0 NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 10.6929538 8.6733568 7.0172160 11.0131679 1.6446408 10.2493471 1.1592417 9.5008646 11.1436531 8.0022136 9.0852340 7.1992503 8.0564751 9.1005759 7.6120937 9.1005759 10.2812861 9.8274105 8.4501749 2.0072314 10.4666632 10.6166156 12.5943840 11.1810475 9.6120937 10.2025354 5.9141220 10.5766653 -1.1626218 2.6446639 8.4427860 12.2043117 12.7750482 7.6153839 13.0915971 12.5433708 10.0449311 8.0172154 3.6446639 7.6606741 8.4185071 8.8344859 8.9114480 12.7543056 6.9510492 10.6390150 12.9807695 6.1592356 9.4975253 10.5711693 7.2036289 5.7561693 NA 14.1239575 10.1954083 1.1592417 8.6654432 NA 2.6446639 9.8224370 10.0637188 10.2977624 10.9241063 9.9749382 9.7936828 3.6952923 10.7494474 9.4892551 6.3918949 7.7915028 9.1915560 12.3688099 14.5265948 6.9461963 10.3657607 10.7823846 8.3569427 3.5921939 3.6952923 8.1970559 8.5720161 11.0549614 0.8372974 5.5377465 6.4520171 9.5703219 11.1552844 7.9614277 6.9087685 4.2967364 10.4311645 11.9667506 2.0072314 13.8621000 5.7561693 7.5955298 13.0843440 13.4277182 12.8120796 8.6170259 10.3779190 11.2719348 10.9231308 9.9921247 4.2967364 8.8555067 12.1690633 11.5077415 0.8372974 10.2161433 9.0864200 0.4222330 3.1599520 9.4316311 10.8436326 9.9902251 8.7576594 14.7086584 9.8548109 9.7516917 7.8059734 4.0072314 15.7469770 9.2583194 13.1711607 13.1739526 9.5299220 10.1180774 7.8030907 10.0782469 -0.00346270 0.55957000 0.55957000 -0.00124730 -0.00521510 0.00152550 -0.00429290 -0.00726080 -0.00742690 0.13865000 0.13865000 0.13865000 0.04741000 0.04741000 0.00305220 0.00305220 0.00305220 -0.00512270 -0.00626340 -0.00745670 -0.00338720 -0.00304750 -0.00304750 -0.00304750 -0.00304750 0.00291330 0.00291330 0.00291330 0.00416320 -0.00346270 -0.00346270 0.00249690 -0.00521510 -0.00166290 -0.00719580 -0.00429290 -0.00429290 -0.00726080 0.00000000 -0.01009400 0.04996600 0.04996600 0.13865000 -0.00191870 -0.00191870 -0.00191870 0.00291330 0.04741000 0.04741000 0.00305220 0.00305220 -0.00512270 -0.00626340 0.00374650 -0.00771960 -0.00166290 -0.00304750 -0.39964000 -0.00304750 -0.00304750 0.00097064 0.00291330 0.00291330 0.00416320 -0.01292400 0.00138680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.220 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.220 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 8.7709972 14.1467119 8.0072314 10.3593976 3.0072314 10.2025354 1.4222868 0.8372974 8.7168898 8.7709972 NA 7.8624464 3.3608699 10.3150649 9.5481129 2.6446639 9.3880535 9.6087961 9.7878624 10.2895478 9.5099353 6.9300631 11.1093531 3.0072314 9.4847649 9.7936828 7.2677596 NA 10.3985945 3.2967364 13.1709511 12.0302158 9.0673271 10.8478346 8.0876050 9.2413838 2.4222599 2.1592417 -0.1626218 4.0467617 9.0009563 9.8330737 9.6526899 5.3451018 7.5744187 5.8373075 10.7434455 5.5787727 9.5394793 NA 10.4085851 3.5921939 4.0072314 10.2164899 5.5434216 3.0852377 9.1261727 8.0540524 6.0369780 NA 14.1296282 -0.1626218 10.3564513 0.4222330 9.3559598 6.1040934 8.2740179 9.2274756 12.274822 4.618667 9.015971 13.091597 10.463928 10.899015 12.754306 12.085382 8.895298 10.208539 13.266779 11.381788 8.572016 11.287229 -1.162622 7.548113 10.769890 11.098520 5.768044 9.536879 9.192658 7.317087 10.274086 6.263572 7.488358 11.181047 7.444637 2.924765 8.115756 4.481738 11.394770 10.483865 8.479358 8.673357 11.039737 6.203628 10.297762 10.567777 10.953975 9.670197 9.501754 8.349059 -1.162622 9.537027 6.876226 5.407162 11.155284 8.542939 10.656288 10.431165 6.682797 14.697787 10.338646 10.890893 12.530576 10.994338 9.299809 1.837297 TCGA-A7-A5ZX 48 0 NA 336 breast stage iiic t2 n3a m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 21 white not hispanic or latino 305.23.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 5.562279e-08 10.9644554 8.7783377 7.2422843 11.1785089 0.7108781 10.0662544 -0.2891219 9.0215161 11.2707583 12.5598196 9.3735717 7.3762392 8.0529777 9.9510983 7.6357159 9.4000277 10.6863930 10.0152546 8.3547594 -1.2891219 11.8761244 10.3757950 11.9124147 11.2776709 9.8789486 10.4565776 4.0328326 10.2127405 NA 2.1703417 7.6026870 13.2724299 13.3964186 7.9846987 13.7522630 13.0590782 10.4578374 7.8606506 4.6177921 7.9373156 8.9505019 9.8510941 8.7249238 12.7140698 3.1032291 10.4485732 13.2748741 6.3475275 9.6135497 10.5342706 7.1662304 3.9963074 NA 14.2345571 9.0249200 4.3256167 8.1266451 -1.2891219 3.2344707 10.0198111 9.6177938 9.3108161 12.0902817 10.0601845 10.1387399 3.4657917 10.8504546 10.1703350 7.4757748 7.2996183 9.2520000 11.7825333 14.6407396 7.7839202 10.0701038 10.5665504 7.3402596 2.4113449 4.9007268 8.7877188 8.5750895 12.6648269 NA 3.7109001 7.0507531 9.7796816 10.9732918 8.9858638 4.9776921 3.7109001 10.1626296 12.1426620 2.7983616 13.6128544 6.0859430 7.4590963 13.0142560 13.0350135 12.8491751 8.6087486 10.3196202 10.8498150 10.9331458 10.5146308 4.3833310 8.9373156 12.3361555 12.1680276 -0.2891219 10.2290646 8.7094936 0.7108781 4.8995430 9.4607727 10.1261170 10.1053660 8.7539307 14.4864107 9.9922538 9.2817078 8.8758102 5.0328326 15.7634926 10.1460526 13.6792551 13.4780532 10.0815908 10.3529550 7.3182337 10.2053288 0.0045800 0.4826300 0.4825100 0.0058309 -0.0063629 -0.0058140 -0.0016629 -0.0089906 -0.0089906 0.0000000 0.0000000 0.0000000 -0.0227440 -0.0167520 0.0049969 0.0049969 0.0049969 -0.0150320 -0.0150320 -0.0078863 0.0040297 0.0076392 -0.3776300 0.0171240 0.0171240 0.0125160 0.0125160 0.0125160 0.0144700 0.0045800 0.0045800 -0.0071958 0.0058309 -0.0058140 -0.0058140 -0.0016629 -0.0016629 -0.0089906 -0.0089906 -0.0089906 0.0059700 0.0038098 0.0000000 -0.0033243 -0.0033243 -0.0033243 -0.0033243 -0.3956400 0.0097276 0.0049969 0.0049969 -0.0150320 -0.0150320 0.0120970 -0.0082788 0.0040297 0.0076392 -0.3689500 -0.3776300 0.0171240 0.0043021 0.0125160 0.0125160 0.0144700 0.0010384 -0.0195890 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6267826 13.7181496 8.0101113 10.6792101 2.9776829 10.7863824 1.7109221 -0.2891219 8.9846990 9.2432592 0.7108781 8.7058508 1.2958406 9.7408807 9.8707747 3.4113449 9.1610835 9.5912521 10.9136394 10.7066704 9.5886706 7.6475412 10.4208487 2.5698799 9.3457144 10.1387399 5.4113415 -1.2891219 10.4910329 5.0328326 13.1473546 12.0765423 8.3547594 10.7158259 8.1266451 9.4607727 5.1202939 1.8808422 0.2958406 -0.2891219 9.0271847 9.8926767 10.2422848 5.8504544 8.2531615 7.2186979 10.1972355 5.0684559 9.9776898 NA 11.3873012 2.4113449 5.2186998 9.7897480 5.3030610 4.3833310 9.2383804 7.0772259 7.3938975 1.7109221 14.0724016 0.7108781 10.5516813 NA 8.2635725 6.1947194 8.0574172 8.8555615 11.6322087 3.7109001 8.7890540 13.7522630 10.4963558 10.4527915 12.7140698 12.2931629 8.9404913 10.1413559 13.0650149 10.7525625 8.5750895 9.0009222 0.2958406 7.9540771 10.6636446 11.194467 6.568885 9.251031 8.872035 7.145532 10.440112 6.479088 7.662188 11.277671 7.840186 5.699588 8.592017 5.389539 11.376683 10.216219 8.122414 9.548531 9.804981 4.819428 9.310816 10.552861 10.945721 10.415672 9.925222 8.222656 NA 9.720123 7.540626 7.077226 10.973292 6.727712 10.869197 10.162630 6.332955 14.647886 10.051866 10.904121 12.646345 11.166487 9.832437 1.295841 TCGA-A7-A6VV 51 0 NA 313 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8610536 2.6664385 6.6288275 11.8447402 -0.4210130 10.1761002 -1.4212062 9.4197567 12.0119121 10.4854935 9.6484284 7.6396750 9.1955275 10.9984123 6.9232752 9.0607781 11.1405054 10.2124280 7.9626832 5.1936890 10.7293607 11.8529200 11.8310528 10.6199534 8.9680723 10.4106818 6.1564067 10.6386544 2.2794119 0.1638851 8.3170711 11.2318237 13.2286279 8.1807496 12.3200243 11.5462050 10.9986756 3.1639334 -1.4212062 7.3405302 8.5346285 9.9761186 8.1639415 7.4307277 NA 11.7928424 9.7325307 8.0788244 9.5294837 11.4937376 6.7786515 8.3636135 4.8827604 14.0130211 10.4259264 1.7488905 10.0718333 NA 4.8269044 9.1258732 9.9745128 8.9387283 10.7344294 9.4700030 10.6298477 0.9008765 10.6972710 10.5891571 5.6124026 7.3895505 NA 6.2083358 16.5607355 8.4315394 11.0660650 10.2970834 8.6450679 1.1639495 6.1564067 7.0986154 9.0837976 12.0923362 -1.4212062 6.4858696 7.0907317 10.1015603 9.6068847 6.8173841 6.7539040 6.2300300 8.9989390 11.6056751 1.9009151 13.4745067 3.8643843 6.0052428 13.0070771 13.1588250 12.7487472 7.3068993 10.5891571 10.5609027 10.3918861 11.3742067 4.6664442 8.7185301 11.5339020 10.3187594 1.1639495 10.3818989 9.7108357 2.0384011 3.1044205 9.7823267 9.8516085 9.4933639 9.2750769 14.6939004 9.6130900 9.6888094 5.8173828 6.4493435 11.2650415 8.6082659 12.9310222 12.5898564 9.6671044 10.6158392 8.1335676 10.9037246 0.1751300 1.2481000 -0.7827700 -0.2795300 0.6434100 0.2067100 1.1464000 0.3399900 -0.0642400 -0.3178600 -0.3178600 1.0308000 0.3336700 -1.2787000 3.4930000 0.1057000 -0.6902400 -0.3480200 -0.2920500 -0.3043700 -0.1199100 0.5438300 0.4720400 -0.3360600 -0.3360600 0.0094364 0.5164700 0.4823400 0.6492800 0.1269700 0.1751300 0.0959440 -0.3071900 -0.8403400 -0.2827500 0.6710400 -0.2859600 -1.2379000 0.0366530 0.1017600 0.1299200 -0.3894000 -0.3743700 0.5795200 0.5510700 -0.2911300 -0.3076800 -0.2953200 -0.3434300 -0.7951900 -0.2910600 0.1644500 -0.2887600 -0.3395200 -0.2993300 0.7160300 -0.3203000 1.0342000 -0.0675070 -0.3360600 -0.3071000 -0.4036200 0.4823400 0.5048100 1.7521000 0.5364300 0.072 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.123 -0.295 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 1.146 0.167 0.102 0.102 0.112 0.112 0.642 0.959 -0.299 -0.299 0.000 0.072 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.123 -0.295 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 1.146 0.167 0.102 0.102 0.112 0.112 0.642 0.959 -0.299 -0.299 0.000 8.5170879 15.1052640 5.7688036 10.4158181 3.6290418 11.9077939 2.4858647 5.6124026 8.4291657 10.0842941 NA 9.2742069 4.6875031 10.1681616 9.8035834 4.5331771 8.1469347 11.6134338 7.3733942 9.6848873 8.3829162 7.5185580 11.7418421 1.9009151 8.4616219 10.6298477 3.9712952 -1.4212062 10.7063283 1.3863143 12.0136070 12.3811921 7.2046875 9.5074972 8.9626829 10.0151697 5.8457660 2.4858647 NA -0.4210130 8.8017737 9.6199533 6.5331755 7.6206377 9.8692684 7.2156029 9.6829221 6.2443144 10.1049888 0.9008765 12.9931354 3.7082645 5.6450675 9.3922309 7.3176451 5.7884325 9.9523877 8.4888717 7.6124019 3.7489013 13.0242523 0.1638851 10.4650563 NA 7.2228345 4.9712952 7.3733942 8.2619731 11.547667 8.479846 7.921054 12.320024 9.661128 9.931574 7.430728 11.400753 8.983056 10.330941 13.352169 11.702615 9.083798 6.573332 1.386314 7.133568 10.908775 11.258899 2.038401 8.838722 8.862067 8.597179 10.567493 7.790867 6.222835 10.619953 11.764629 NA 7.584603 10.260200 12.761140 10.649771 7.452422 8.506757 10.100579 6.405528 8.938728 9.808999 12.164763 12.279960 10.365657 9.159237 2.900915 9.627956 7.575480 6.949666 9.606885 7.887318 10.965992 8.998939 7.868998 13.860257 10.535355 10.298795 12.603166 11.409296 8.954018 1.900915 TCGA-A7-A6VW 48 0 NA 285 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8916797 1.4701464 6.6795941 11.6506715 NA 8.2796408 NA 8.4455111 9.8653179 8.9779353 8.6079857 7.1425656 8.5890818 11.0317469 6.6130984 7.5611352 9.1043469 9.7037605 8.6333713 3.0551089 10.7837796 11.9742976 11.3356163 11.0830093 9.8276928 9.6517072 4.5290338 10.1895296 4.6665407 0.4700943 7.1235834 10.0170353 12.4803192 7.8964057 11.8313535 11.0160705 11.1316220 7.6632557 4.6665407 8.5505140 7.7799957 9.2261410 7.3730182 9.4616626 NA 12.4225180 10.0336548 8.9699865 10.5726589 9.7965702 8.3114432 4.2427321 1.6925165 15.7534549 9.5181734 0.8851839 9.0183204 -1.1149724 3.9726375 8.0921926 10.4368865 8.8552840 8.0576057 9.2591310 9.7478157 NA 9.6868865 10.3471692 5.0144624 6.4550345 0.8851839 7.6062771 13.8148528 5.9425192 9.4980468 9.0860768 10.8534850 1.8851839 1.4701464 7.9268374 8.0750025 9.9930492 0.4700943 4.2774939 8.1543047 10.2525929 9.7746821 5.8393751 4.6131014 5.0946330 8.7890602 12.0112374 3.9295733 13.1791527 3.7431595 5.9295733 10.7400466 13.7000611 11.3520195 7.6130984 11.2788369 10.2547755 7.3487025 9.5380232 2.7920640 9.3969310 11.2517737 7.7860448 0.4700943 10.4846263 9.0272854 0.8851839 5.0636928 8.1519648 11.4170470 8.8070193 8.3548202 14.9213089 10.4277265 8.0675726 6.8795318 1.2070807 12.1668186 8.6467293 12.4236097 12.5050543 10.2300290 9.4028477 6.1331052 10.0228419 0.110270 0.110670 0.349240 -0.604000 0.094637 -0.620250 1.951000 -0.017254 0.089224 -0.021098 -0.021098 0.012376 0.761400 0.078582 0.095798 0.102200 0.102200 0.658460 -0.605840 -0.604580 -0.582740 0.134650 -0.531440 -0.531440 -0.531440 0.006109 -0.036129 0.013353 -0.584930 -0.517720 0.110270 -0.525120 -0.589900 -0.590970 -0.627600 -0.615080 -0.466850 -0.017254 0.054803 0.637000 0.143840 0.087390 -0.613740 -0.056307 -0.024388 -0.024388 -0.579200 -0.596240 0.098124 -0.595650 -0.590290 0.983070 -0.592920 -0.592920 -0.580090 -0.582740 -0.594480 -0.596720 -0.531440 -0.531440 -0.624270 -0.495380 0.022725 0.147260 0.063366 -0.578750 0.000 0.000 0.000 0.000 0.946 -0.606 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 1.231 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.946 -0.606 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 1.231 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 7.1889587 13.5451741 5.3281220 9.2764218 NA 11.9215236 2.6925388 7.5786655 10.4116775 9.8070192 2.5856116 7.4351168 8.0921926 11.2950995 9.8232876 4.9512661 2.4701464 9.3820321 7.8218161 11.0657091 8.7336448 5.7053559 10.1630468 2.6925388 7.5959847 9.7478157 5.0750020 NA 9.8077627 2.3446013 13.6211044 12.3407623 7.2205689 9.0437880 12.1136963 10.8166545 3.7920640 NA -1.1149724 1.2070807 8.8144367 11.0361948 8.5236141 0.8851839 8.6124859 8.7117268 9.9532847 4.0144624 10.4994280 1.8851839 9.1259695 1.8851839 2.3446013 10.0025162 7.2611302 3.8851741 10.0964582 7.6599652 7.4776352 8.9937027 13.8401015 NA 10.8981519 -1.1149724 9.3899972 1.4701464 8.3093445 7.5994234 11.079477 8.952613 7.104347 11.831353 9.067573 11.544505 9.461663 8.113997 9.578569 10.335359 12.829707 10.849519 8.075003 9.361924 5.961994 7.705357 8.503564 10.481834 3.692528 8.651707 8.969987 7.188959 9.076731 6.633372 7.089749 11.083009 12.518968 1.692516 8.004119 9.324947 10.253685 9.272118 6.890803 9.842280 3.929573 4.862456 8.855284 10.043157 11.416560 10.554506 10.058231 6.743159 2.972638 9.437636 6.188959 5.514536 9.774682 5.613098 9.831353 8.789060 7.989437 15.012749 10.953957 11.065709 11.665103 12.186817 8.879532 1.207081 TCGA-A7-A6VX 68 0 NA 317 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 4 2 NA NA 1 2 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.7218497 5.4933047 7.2628757 11.4190792 -0.2209504 8.7318017 0.7790496 9.7790602 11.0314301 8.2053251 9.3269188 7.0458470 9.2769121 10.0713819 5.0458448 8.4846928 10.8302692 9.9198900 7.1410035 1.5864045 10.7941268 11.0183604 13.6086839 11.9120419 9.1189102 10.6221962 4.7563402 11.6653265 NA 1.7790496 7.3182192 11.1924238 13.7243669 8.5389486 12.5761138 12.5256796 9.7470070 6.8770927 4.3336456 7.1099769 7.7215750 11.9383009 8.6401473 12.8748693 1.5864045 10.5645128 13.8557506 8.1842019 9.0426112 11.2284669 8.8424553 7.3937705 1.1009776 14.7933112 9.1410041 2.8665322 8.8558757 -0.2209504 3.8234539 10.9808779 10.7588427 8.4655607 10.2354147 10.4877131 9.6143211 1.9489746 10.6012327 11.0201496 6.9688845 8.4065941 2.5864045 10.8892173 15.3243415 8.0232337 10.1995468 10.4332488 7.0690791 1.3640121 3.9083422 8.5653298 9.6594091 10.5222116 -0.2209504 5.3489158 7.2178521 11.2071587 10.7829295 7.1926883 5.7790601 5.4514848 8.0851219 11.7256011 3.6859514 13.0781967 7.4690581 6.8928026 11.2011250 13.6464838 12.5906357 9.3593189 9.9725857 10.2888353 10.2903632 10.9486722 5.3489158 7.9057649 12.6140250 11.4109194 -0.2209504 11.0919432 9.5222117 NA 3.9889028 9.2828859 9.8737978 9.8035073 9.0340889 15.2189399 9.8179793 10.3001700 8.9836315 5.3789728 15.0326862 8.9664123 13.0747575 12.4561192 10.0644626 9.4102374 8.3278822 10.4759235 0.2151400 0.2151400 1.7513000 -0.4526500 1.6363000 -0.4790200 0.4522400 -0.0031859 -0.0865180 -0.0210980 0.7042000 0.8546200 0.5355500 0.0826210 1.2353000 0.0965250 -0.0052610 1.0390000 0.6224200 -0.1475900 0.3327000 0.4099400 -0.3508800 -0.3508800 -0.3644700 -0.3148200 0.8954700 1.0420000 0.0538010 -0.3757700 0.2151400 -0.3433100 -0.4055000 -0.8475500 -0.4854800 0.0391950 0.0535210 -0.0031859 -0.0865180 0.9075400 -0.3911800 -0.3429700 0.6240600 0.7891000 0.7891000 0.8942700 -0.3046300 0.0826210 -0.3812300 -0.8605800 -0.4479900 1.0390000 -0.4430200 -0.4430200 -1.2929000 -0.4228700 0.0565130 0.0840650 -0.9148500 -0.3644700 -0.2356900 -0.3148200 0.1503900 0.4634800 -0.4599300 0.1285900 0.000 0.000 0.444 0.444 0.596 -0.443 -0.911 -0.423 -0.392 0.594 0.000 -0.915 -0.364 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.460 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 0.000 0.000 0.444 0.444 0.596 -0.443 -0.911 -0.423 -0.392 0.594 0.000 -0.915 -0.364 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.460 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 8.7776508 14.0152240 6.9439670 10.7695189 1.9280102 10.9802653 -0.2209504 NA 8.1009882 9.2466658 0.3640121 7.7068386 5.6370421 10.3850027 9.1778040 4.5339495 7.1799399 9.8062752 11.0443823 10.7634787 8.8961450 8.5587796 10.5542590 1.3640121 8.6385952 9.6143211 2.3640121 NA 10.1054898 3.5339495 12.0640289 12.0334984 8.1032406 10.0018551 10.5306043 9.6095755 5.0644604 -0.2209504 -0.2209504 4.5339495 8.8316284 9.6678034 11.0177635 2.3640121 9.7573060 7.8875850 10.0144762 6.4864199 9.1670776 NA 11.7332566 4.2053221 3.4795022 9.6499028 6.8065793 0.3640121 10.3177342 6.8234539 4.1009861 1.3640121 13.0007984 -1.2209504 10.9651745 NA 5.4514848 6.0078795 8.2507357 8.7038728 9.326765 7.853202 7.563695 12.576114 10.206268 11.890848 12.874869 9.527253 9.279205 11.347966 12.541442 9.168154 9.659409 9.380831 3.422919 6.685951 10.694566 10.910274 7.246666 8.831628 8.367775 8.276912 9.876842 6.254794 6.913487 11.912042 10.426519 3.026995 3.908342 8.845284 11.021043 9.886277 7.493305 8.096473 11.349153 3.586416 8.465561 10.042329 12.018808 9.755624 10.433696 8.624550 10.724870 9.475489 7.934334 2.238481 10.782930 7.861209 10.433728 8.085122 7.998326 13.657734 9.731801 10.671224 12.630517 10.264386 9.465561 1.948975 TCGA-A7-A6VY 48 0 NA 266 breast stage iib t2 n1 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 338.18.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.92882330 -1.53157308 5.47965741 10.97001980 -0.53157308 9.05995386 NA 8.69484364 10.82047481 9.28141080 9.69785112 6.73521752 7.73989467 10.23164373 8.07760993 9.13020939 10.12082832 9.97771152 8.18610780 9.48523964 11.53030884 11.67666573 12.25347510 10.25306626 9.15054825 10.13509925 7.43709787 9.23496038 -1.53157308 0.05338942 7.89469592 11.52760685 11.96802817 7.21997582 10.66349593 11.06252266 11.20165861 5.98413132 0.79035501 7.13731600 8.56909382 8.53586594 9.11318894 5.91964280 NA 11.22352759 10.58834520 8.68153571 9.40339002 10.54491296 7.59771440 5.95224736 1.46842692 16.06642397 12.89036470 1.63835192 7.96428657 -0.53157308 7.20314143 9.07853352 10.40874497 8.90514297 8.92888726 9.28701348 10.02637363 3.67788028 10.39990764 10.34533195 5.39916768 8.45284991 0.05338942 6.06834406 14.74168063 7.85111999 10.14879089 9.82102662 9.75960211 2.37531751 0.05338942 8.94112216 8.04207849 11.79976827 NA 6.26933056 8.19464951 9.65268690 10.14262365 8.71398409 6.95627160 5.56646205 8.05151404 12.28801177 3.05338942 13.59501489 3.79035501 5.95224736 11.56102339 13.14002774 12.46030750 8.04586011 11.23371751 10.29458261 9.88131880 10.83092316 4.39917109 9.41533763 10.56514655 9.04113153 -0.53157308 10.66841036 9.51623700 2.92785854 2.89536079 8.87782246 8.86289395 9.08681693 9.50529193 15.08625753 11.41387525 8.98905014 7.03067376 0.05338942 12.83256604 6.20314046 12.29686543 12.56382842 10.59481323 9.55589417 7.45427297 11.09880772 -0.48428000 1.01950000 0.51002000 -0.41091000 -0.48691000 -0.49235000 0.02314500 0.09550800 0.01070300 -0.51352000 -0.51352000 0.14399000 0.34112000 0.09928800 0.03425400 0.03425400 0.03425400 0.06938200 0.04315700 -0.51032000 -0.49423000 -0.02698800 -0.51125000 -0.51125000 -0.48942000 -0.00083160 -0.00083160 0.05808100 0.05494500 -0.51548000 -0.48428000 -0.13678000 -0.41091000 0.02384700 -0.47585000 -0.49902000 -0.49141000 0.05936600 0.03651200 -0.52045000 0.00013863 0.05922300 -0.51352000 0.48045000 -0.50328000 0.03228100 -0.05320600 -0.40041000 -0.51434000 -0.51496000 -0.50598000 0.05195600 0.04471500 0.00055459 -0.49392000 -0.49934000 0.01042400 0.03820600 -0.51125000 -0.51125000 0.03171800 -0.51784000 -0.46387000 0.01810300 0.01098200 -0.52379000 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.491 -0.491 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.491 -0.491 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 8.6483403 14.4851526 2.9278585 9.6124522 4.2886096 11.7410612 2.7903550 5.0382869 9.7056414 8.6181784 6.1895301 8.2183007 7.9319560 10.7807472 10.0895675 4.4457135 5.1826764 9.8936472 7.8671749 10.5052918 9.9380529 7.1408563 11.0191782 1.2757818 6.9482119 10.0263736 0.4684269 -1.5315731 10.6833576 3.9602800 11.5152144 12.9899091 8.4313275 9.6656481 10.4894114 9.4620775 3.0533894 3.0533894 -1.5315731 6.0230202 9.6687170 10.0780719 5.8434714 3.9602800 11.2940799 8.4880221 9.9642864 5.9522474 10.4663165 1.0533894 12.4334039 4.7903602 2.7903550 9.5629115 7.6562532 9.0739110 9.4449956 8.6028577 11.1952882 7.9299111 13.3047284 -0.5315731 11.0316277 -1.5315731 8.0849800 1.7903550 9.2925945 7.5264233 12.18852598 8.98905014 8.23496014 10.66349593 9.60028834 11.72714463 5.91964280 9.49909844 9.08491599 10.43817764 13.61324893 11.21871967 8.04207849 8.12664305 0.05338942 6.89888431 10.29020539 11.407092 4.735593 8.363249 8.935018 5.326412 10.353872 7.803822 6.154931 10.253066 10.669943 NA 8.848892 9.511397 11.532332 10.249791 5.927863 9.479659 7.550581 9.354890 8.905143 10.162354 10.464552 11.956899 10.526085 7.974243 NA 9.742594 6.641059 9.517599 10.142624 7.387294 11.362870 8.051514 7.646025 12.755639 10.013396 9.700253 12.131545 11.636163 9.347249 5.007590 TCGA-A8-A06N 66 0 NA 0 breast stage iiib t4b n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 3 4 1 1 2 5 NA NA 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 5.562279e-07 1.946798e-07 12.2512374 -2.1234339 8.0324166 12.5811561 -2.1234339 10.7186842 2.4612928 10.1515854 11.6505031 8.7543848 10.6401686 7.9179932 10.2013581 9.8575442 8.6378852 7.3067863 10.8065168 8.6412053 4.8421190 0.4613190 11.2245087 8.2117243 14.1701287 6.1051521 8.5965782 10.5392246 1.7832052 10.3495195 -1.1237483 1.5767640 8.3459756 11.0749323 13.0015455 4.7343140 13.4264793 14.4545001 5.1982623 6.1147376 3.0462640 6.7060567 9.1260398 8.8735133 4.4762456 14.1952296 1.4613190 7.8564735 15.0439872 -2.1234339 9.1713450 11.6426556 3.1242620 6.8678557 -1.1237483 13.0497892 7.8363357 -0.1235911 9.1663527 NA 3.1617426 9.8664377 9.9991618 9.5129585 10.6078649 9.9753528 9.3424103 2.0462466 11.8148107 10.0251281 7.6328898 7.8159129 1.8763303 10.8314388 13.9975030 8.2198969 11.2931313 12.2061302 8.9998087 NA -2.1234339 8.5914378 9.2133981 9.3403689 NA 4.5487572 7.7044702 10.8054073 9.7004969 2.7832261 3.6042493 2.3357691 9.6383005 11.8269808 0.8763303 12.5442769 6.2206298 7.9796218 7.0184406 10.3472469 13.0073869 7.6576936 10.0549986 10.6977092 10.7795265 11.6479264 6.0906523 8.5255901 11.5447756 13.1004862 NA 10.2352596 10.5329822 0.4613190 3.4621963 10.2464763 9.5165788 9.3661819 9.9444403 15.2825803 11.1778300 11.7380023 9.2947136 0.1982427 16.1072174 1.6836965 9.9241394 8.7076411 10.5593284 9.4631737 8.5363296 10.7688140 0.4709800 0.5004700 0.5089800 -0.0169790 -0.0583270 0.4978700 0.4949300 -0.0633010 -0.0997410 1.0134000 0.8882200 2.3893000 -0.5953600 -0.5893100 0.3388000 0.5470000 -0.6236100 0.4779500 0.4779500 -0.6332000 0.0253900 -0.0202750 -0.0705360 1.0321000 1.0321000 -0.0027707 -0.0027707 -0.0027707 0.8726900 0.0162860 0.4709800 -0.0212350 -0.5680300 0.4978700 0.4838900 0.4949300 0.4776700 -0.0633010 -0.0997410 -0.6500600 0.4476500 -0.0407520 -1.2165000 -0.0381700 -0.0381700 -0.0381700 0.0157270 -0.5893100 -0.5893100 0.4655300 -0.6180600 0.4779500 0.4779500 0.4779500 -0.6332000 0.0253900 -0.0202750 -0.5840200 -0.5917500 1.0321000 0.2526100 -0.0027707 -0.0027707 0.8726900 -0.0468540 -0.5747600 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 0.000 1.032 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.000 0.000 -1.217 1.085 0.000 0.000 0.000 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 0.000 1.032 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.000 0.000 -1.217 1.085 0.000 0.000 0.000 6.3998957 8.7155375 3.4309275 6.4077147 4.9165674 10.8487752 -2.1234339 -2.1234339 8.5255901 8.4537628 NA 5.7418202 NA 9.9508099 9.2338859 2.6836965 2.1982741 9.5061457 6.1003364 10.5916524 9.6990161 8.3801597 9.7681175 1.9638070 10.4748516 9.3424103 -0.5386810 -2.1234339 10.6042543 3.3998957 11.4365472 11.5273855 8.3357655 10.2912833 11.2796122 9.1965702 5.4309242 -0.5386810 -2.1234339 4.5056877 9.4655168 8.1778301 10.5336522 -2.1234339 3.5916794 7.3439390 10.1375472 8.2782799 10.1177211 NA 9.4261184 2.7343086 3.3998957 9.3762893 5.4983849 0.1982427 8.1123478 6.8791482 5.4612961 NA 13.5597397 -0.5386810 10.3319179 -1.1237483 6.9343254 2.8305393 9.3875924 8.0209922 13.578205 4.446190 8.784726 13.426479 9.640376 9.773423 14.195230 13.664007 8.850748 11.348517 12.658974 9.672373 9.213398 8.185810 1.046282 7.772666 11.886774 10.5036397 7.9111325 8.9186772 10.0453193 9.1937464 9.9904632 4.7466997 2.3999093 6.1051521 5.3275437 0.1982427 4.8875594 8.3490246 6.8593273 8.9618062 9.7056602 9.1784014 13.4468122 2.3357691 9.5129585 11.0015858 12.3201839 6.8217778 10.6861019 9.1605796 NA 8.4705649 3.2686440 2.0462466 9.7004969 -2.1234339 10.5965781 9.6383005 8.1195196 13.4058559 10.3153855 9.9070009 12.4002020 8.7513151 10.5974330 -0.5386810 TCGA-A8-A06O 60 0 NA 396 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 3 1 NA NA NA 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.056833e-06 1.946798e-07 12.70710804 7.21150969 6.31369028 12.41262192 0.44328837 10.70923333 0.02828624 10.48703618 11.79936460 7.94317119 9.76299752 7.50131732 8.05250393 9.32749583 5.86117874 8.72641368 10.61481491 9.32520402 7.09078358 2.25068877 10.70100784 9.93967985 13.44116639 11.00054971 8.98345340 10.60477216 5.62323478 10.76833562 NA 0.44328837 8.58287660 10.06720685 12.27294899 9.07541176 13.04828391 12.59299309 9.71653810 4.42060367 1.25065845 7.23774152 8.46569332 10.14895774 6.74253311 12.90070623 3.48771786 9.34343736 12.58591109 1.25065845 9.22173936 12.25580352 8.58159717 6.53078866 1.02828624 13.49409231 9.78206171 3.19821124 8.70776807 0.76528013 4.11574908 9.74138794 10.12368482 9.57710985 10.92990903 9.80691255 9.95606580 2.96689185 11.49860781 10.63314991 5.99791335 7.50941478 3.02828624 11.30809188 15.08014819 8.19575605 11.61184079 10.99623457 8.11751740 1.02828624 6.10866036 8.43909242 8.99599435 12.35976468 -0.55660553 5.85271551 6.80964724 10.11972319 9.91753827 9.02546739 5.73794629 5.62323478 9.97031358 11.77522198 0.44328837 13.97574216 5.04323950 7.02075442 11.63700473 12.05458075 12.79094671 7.70542020 9.86381196 11.26987385 10.24390978 11.31272643 5.50941399 8.10688324 12.56962651 11.94926094 -0.55660553 10.25148513 10.78512212 1.02828624 3.87327184 9.95458384 10.43413842 10.05895500 9.28174136 15.04233739 10.73823323 11.88691647 9.01223148 3.30130962 16.35289620 5.89453647 12.80691261 10.82107813 10.23408105 8.50266993 8.33814314 10.75948244 -0.182950 0.949520 1.207400 0.227620 0.211920 0.113890 0.219450 1.563300 -0.286940 -0.597010 1.685100 3.656900 0.221450 0.221450 -0.605840 3.656900 -0.599440 -0.072675 -0.072675 -0.612010 0.235810 0.233950 -0.611620 0.584710 0.584710 0.021323 0.753950 0.753950 0.225150 -0.182950 -0.182950 -0.079343 0.214530 0.069525 0.107870 0.219450 0.219450 -1.043100 -0.286940 -0.208340 -0.199740 -0.174110 -0.618150 -0.610850 -0.610850 -0.593800 -0.611530 0.237210 0.237210 -0.599640 -0.599440 -0.072675 -0.072675 -0.072675 -0.612010 1.075700 0.233950 -0.590190 -0.611620 0.584710 0.014888 0.021323 0.753950 0.216800 0.172720 1.018400 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 8.33054585 12.30605955 3.61324874 9.36887986 4.17124687 9.75620837 2.25068877 -0.55660553 8.37406267 7.18479205 NA 7.48498477 3.83564117 10.02405506 9.51008726 3.61324874 8.41486871 9.37627823 9.95211046 11.50114791 9.53250438 8.54004045 10.06171086 2.25068877 9.40622138 9.95606580 3.76524830 NA 11.05088685 2.69124381 12.12060453 12.26828408 7.78983878 9.70952621 8.99214726 10.27502847 8.12280522 0.02828624 -0.55660553 2.53079491 9.27858629 9.03391244 10.47537109 4.74710807 8.27361892 7.81401265 10.19695996 6.35621425 9.82810903 NA 11.46950293 0.44328837 4.53078866 9.19363032 6.62700997 5.61325169 8.78094717 8.73334417 8.41343118 2.61324874 13.44156318 -0.55660553 10.32175947 NA 7.11575116 4.67214243 7.84846708 8.41343118 14.106534 6.546614 8.704245 13.048284 9.273841 11.446316 12.900706 12.557230 8.444734 10.784844 13.092469 11.970436 8.995994 9.655822 3.530782 7.839930 11.894150 10.586709 7.949137 8.751664 8.916016 10.289991 9.762981 6.288816 8.512104 11.000550 6.191517 2.613249 2.966892 8.239446 10.732480 9.882117 10.469354 8.409110 12.336532 7.191518 9.577110 10.768912 11.125442 9.332829 10.431655 8.462916 7.484985 8.696771 7.403038 6.737946 9.917538 5.974706 9.977142 9.970314 7.844205 13.494449 10.286069 9.575182 12.753512 10.245034 9.491131 2.613249 TCGA-A8-A06P 63 0 NA 396 breast stage iiia t1c n2a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 1 5 2 NA 3 2 1 1 3 5 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 6 0 0 2 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.112456e-07 11.33498736 8.01729783 7.44150672 11.47606018 -0.01246084 9.96816608 NA 9.81938558 11.81898973 10.26483794 9.94077695 7.50325013 8.83512983 9.84501326 7.44424714 8.58249692 10.28140535 9.11597453 7.21315964 2.92615127 10.52670932 9.72338859 13.58354609 10.69433429 9.21797126 10.57938449 4.57251379 9.99691266 -0.59749610 1.86203474 9.24886188 11.28733094 12.28504003 8.18722289 12.71540007 12.61508441 10.38272755 6.65051614 4.20994458 7.36258999 8.45243647 9.17737519 8.00064062 12.10659971 3.68799008 11.05990649 13.31510316 6.56749525 9.93932092 10.74188128 8.20833192 5.54214040 -0.59749610 13.16066857 9.22356470 2.65051184 8.18558610 1.40261304 5.40258917 9.77273041 9.78250784 9.70007744 11.86828194 9.86099460 9.64754639 -1.59727782 11.20227439 10.05004643 6.76013976 7.83513015 8.80453408 11.41206677 15.36171832 8.34939182 11.74688393 10.85765830 8.32888402 2.10302758 3.76013577 8.31098079 9.27987217 11.01084284 NA 7.39694123 7.45787004 9.84397600 10.98237531 6.22276786 6.32145193 5.03194651 10.13305819 11.41398999 1.57250166 13.78754035 5.62175593 7.38272777 12.15161941 13.13337655 12.91217747 8.17902081 10.63949908 10.97647183 10.37610607 11.47220561 4.82885495 8.53573028 11.13920132 10.45243657 0.72447565 10.63110610 9.47270891 0.72447565 3.79936711 9.48407145 11.26832128 10.26056899 9.07942665 15.10707259 10.73686130 10.45243657 7.71320090 4.92615127 14.88783557 8.33480288 13.00453285 12.07997734 9.97481450 9.71092711 7.92810853 9.90905422 0.0158660 0.0158660 0.0158660 -0.0111980 -0.0518960 -0.0139530 0.0813220 0.0112610 -0.0564980 1.2687000 1.2687000 1.2707000 -0.0012473 -0.0627640 0.0080567 0.0080567 0.0080567 0.0049969 0.0049969 -0.0092666 -0.0940640 0.0311550 0.0589370 0.0589370 0.0589370 -0.0242510 -0.0242510 -0.0242510 0.0813220 0.0158660 0.0158660 -0.0085510 -0.0111980 -0.0139530 -0.0139530 0.0813220 0.0813220 0.0112610 -0.0564980 -0.0564980 -0.0100940 -0.0100940 -0.6881500 0.0158660 0.0158660 0.0158660 0.0158660 -0.0627640 -0.0627640 0.0080567 0.0080567 0.0049969 0.0049969 0.0049969 -0.0092666 -0.0940640 0.0170130 -0.6550100 0.0589370 0.0589370 0.0143300 -0.0242510 -0.0242510 -0.0047133 -0.1253800 -0.6364200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.583 0.000 0.000 0.000 9.01361272 13.97101921 8.94851792 9.98848943 4.13051085 10.22356470 1.20995237 -1.59727782 8.28675873 7.72226040 NA 8.01355773 4.01729839 10.46057978 9.20833192 -0.01246084 9.17572718 8.51893203 10.32368508 10.37161473 9.45789753 7.85173655 11.33110639 2.92615127 9.44287779 9.64754639 4.61203986 NA 10.88942304 2.86201490 13.18947020 12.20550822 7.45787004 10.12582233 7.65997592 9.50390721 1.86203474 -0.01246084 -0.59749610 5.88640382 8.74910180 9.91680892 8.83512983 5.47940520 7.78873073 6.87426336 10.75269842 7.17737469 9.61325943 -1.59727782 10.23468680 1.40261304 4.70637031 9.16943150 6.44402760 5.15747629 9.70465569 9.35314396 7.56245919 -0.59749610 13.72462177 -0.01246084 10.18394770 NA 8.72451624 5.44698070 7.51893164 9.27295281 13.4851758 5.4686778 8.3229408 12.7154001 10.6086866 10.2243619 12.1065997 12.3673801 9.0346744 11.0066779 12.3713448 9.9034298 9.2798722 8.7991929 -0.5974961 7.1904904 12.1227254 11.1562227 6.5006204 9.2690942 9.2644503 7.7177374 10.6189489 6.4632840 8.8257039 10.6943343 6.5058751 0.9875392 4.9417449 6.1309165 11.7893936 10.3823705 9.2225515 8.9866109 12.4262557 6.3392265 9.7000774 10.6490318 12.1478422 10.6208486 10.7163213 9.9729181 NA 9.6070736 7.2016750 6.6314070 10.9823753 8.6587967 10.5354090 10.1330582 7.2667744 13.7959785 10.4148633 9.9927071 12.8323216 10.0714730 10.1790211 0.9875392 TCGA-A8-A06Q 63 0 NA 31 breast stage iiia t3 n2 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 6 3 1 NA NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 5.411685e-06 1.110089e-06 11.5992190 3.2278951 8.1205676 11.0978928 NA 10.2583956 -1.8593522 10.1404280 11.8884111 7.4118906 9.5593346 7.9168612 8.2331849 8.2515638 7.5895762 9.4095547 11.1358418 9.6897312 5.4165527 1.1404515 10.2325243 6.6242442 13.5567637 10.3725491 8.1460523 10.3268518 3.0946246 11.5356903 -0.8596140 0.1403860 6.5327455 9.6634998 13.2604228 6.9637955 12.5885442 13.2502178 6.4118906 4.1404269 0.4623665 3.1404351 7.9827780 9.3626191 4.9477830 12.7172075 0.7253485 8.3800264 12.3884296 8.2515638 8.8354735 11.4004653 7.3376442 7.4001716 -1.8593522 12.9011978 9.9082649 2.7253922 7.9003162 NA 2.6639821 10.0596638 10.5818160 10.3299436 11.9576115 10.5279068 8.7188007 4.1177117 12.3311786 9.5181808 5.8199083 6.5792194 12.0556538 11.6918959 14.1514586 9.6623472 11.3112919 11.6026746 7.7366177 4.3498818 5.0711663 8.6402739 8.9550105 12.4764463 -1.8593522 4.6482238 7.0322122 8.9461717 10.4584058 0.9477784 4.8818946 5.6795871 10.9758863 12.1581933 0.4623665 13.0187663 5.7842841 7.1148428 11.4152429 10.8535996 12.6493988 7.9119174 9.8538145 10.8121901 10.1581550 11.3043921 5.8953147 8.6718092 12.3162893 10.8503733 -1.8593522 9.8413011 10.0077067 2.9477784 3.0497179 10.6302759 10.9473803 10.2825350 9.0726426 14.6595574 10.8291153 11.2928712 9.6217228 1.1404515 16.2705711 9.0061611 11.8056528 11.5854428 10.5750562 8.2278907 9.3153536 10.2528740 -0.0063668 0.4056100 0.9045200 3.1128000 0.4868200 0.4978700 0.4226500 0.0984150 -0.5203000 0.4854400 1.3323000 0.4727200 0.3996100 -0.0116110 -0.0797420 0.8554100 0.3603500 -0.0400730 3.6569000 0.0000000 -0.5117700 0.4502000 0.4204900 -0.5916600 -0.5511600 0.3239800 -0.1123400 -0.1123400 3.6569000 -0.0477320 -0.0063668 -0.4453400 -0.5256300 0.4935500 -0.5193800 0.3874900 0.2687800 0.0984150 -0.5178400 0.4888900 -0.5159900 0.4706800 -1.2929000 0.9735800 -0.5223500 -0.5212500 -0.5423500 0.0041632 -0.5173300 -0.0797420 -0.0096806 -0.0400730 3.4125000 -0.0536110 0.0000000 -0.5487500 0.4347900 -0.4777600 0.4204900 -0.5916600 -0.0642400 -0.1295300 -0.1123400 -0.5707100 -0.0142280 -0.1526300 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 -0.445 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 -0.445 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 6.8199083 9.1219953 1.7253922 8.1627956 3.9332799 10.2476450 -0.8596140 NA 8.8278038 3.3883549 -1.8593522 5.2285263 0.9477784 10.5595981 8.9669763 0.1403860 6.6950167 10.7433587 10.4606644 11.0559339 10.5550498 8.2424034 9.1697151 0.4623665 9.0659823 8.7188007 6.4623567 NA 9.5967824 2.5998652 13.5470980 12.8810520 5.3002995 9.6467355 7.3740475 9.5962688 8.2838111 -0.8596140 NA 4.1177117 8.7542174 9.6600642 10.4609465 3.0946246 9.1748623 7.2876330 10.5588076 6.9315909 9.8155029 -0.8596140 9.8088698 -0.2745642 3.5327409 10.2820434 7.0834410 2.7253922 6.9606067 8.0138720 7.9234261 -0.8596140 14.1049493 -0.2745642 10.0157933 NA 6.9669760 2.7842946 7.9036403 9.4171339 12.6960794 6.9637955 9.4891561 12.5885442 10.3679958 11.5958836 12.7172075 13.0541121 9.9576635 10.5381026 12.5548489 9.6337830 8.9550105 9.6447504 0.7253485 6.9119168 12.1925714 10.4287172 7.9542091 9.0015149 8.9843490 9.2071898 9.0431949 4.6322799 8.4453497 10.3725491 6.5957558 -0.8596140 3.4258352 8.1300495 7.1875520 9.3234430 8.4407803 8.3954566 11.4017884 4.2697139 10.3299436 10.5487577 11.1196745 7.8818952 10.4203287 9.4107233 4.4979827 9.9722854 7.7713323 4.4442099 10.4584058 -0.8596140 9.3529242 10.9758863 7.8004418 14.3857392 10.7498376 9.4724644 11.4651710 10.2068536 9.7486828 -0.2745642 TCGA-A8-A06R 69 0 NA 547 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA 1 4 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352921e-06 3.469029e-07 12.3793545 4.1167723 7.5119471 10.5058637 NA 10.6262153 NA 9.6847264 10.8056033 6.9024957 9.7666251 7.1792662 7.8959424 9.5904759 7.1242651 9.3535818 9.4939807 10.3702238 8.2580261 4.8355906 11.6024318 9.9464930 13.4215018 10.0211539 9.3455889 10.5758603 6.3197101 10.6222510 -1.4683316 1.3391374 8.3694355 11.9591205 12.9018139 7.9068473 11.2711664 11.3409729 8.9486052 4.6192721 NA 6.1391379 11.0614822 11.6334551 7.5430349 12.4589375 0.1167640 10.6166161 12.2622778 3.4386921 9.8463910 10.9326871 6.9538728 5.7017320 NA 13.8325117 10.4867310 1.9912452 8.7714063 NA 6.5597136 9.7903737 10.7007932 9.3670687 9.9459643 9.9454356 9.5360282 0.1167640 10.7200875 9.6847264 6.1900182 7.0553692 6.5033519 10.6066181 14.8828677 8.0300187 10.7145124 10.3975409 9.4334290 1.9912452 6.2933594 7.3455889 8.5938538 10.1783664 1.1167640 7.5925034 6.8627241 10.0171338 11.1134791 4.7606255 6.5486154 5.7216324 10.4266255 12.0985753 1.5318181 13.8704396 4.7216297 7.6559292 11.5376077 13.0597123 12.7502953 7.3455889 9.7503710 10.6513973 10.0034829 10.4133041 4.9241236 8.2665172 12.3382566 8.8937514 NA 10.3956069 9.0336449 NA 0.5317682 9.4220719 8.8056033 9.5624748 8.9380128 14.9866371 10.7284098 9.9433188 8.2631269 4.8716564 14.2016616 6.7509762 12.4806312 10.5741511 9.1130084 9.2631267 8.2614283 9.3496786 -0.24606000 -0.17208000 -0.06231900 2.25780000 0.57661000 -0.36533000 -0.55887000 3.65690000 -0.21057000 1.00840000 0.09159000 1.63460000 0.32302000 0.43772000 -0.02616700 1.09360000 0.00069327 3.65690000 0.45496000 -0.77711000 1.65940000 3.24340000 -0.42287000 -0.49282000 0.77195000 0.64928000 -0.79536000 1.01590000 2.24450000 -0.43138000 0.22022000 0.32675000 0.16415000 0.60467000 -1.15150000 -0.21837000 0.13273000 -0.00733390 -0.14361000 -0.32065000 0.18787000 0.10468000 -1.18520000 -0.44627000 -0.44627000 -0.42996000 0.28850000 -0.17610000 0.41898000 -0.63309000 0.00069327 -1.16580000 0.45496000 0.45496000 -0.26336000 -0.09221300 -0.12681000 -0.08837400 -0.42287000 -0.46908000 -0.28204000 -0.53167000 -0.49527000 -0.13432000 -0.34126000 -0.45726000 -0.111 -0.111 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.449 -0.449 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 0.000 0.000 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 -0.111 -0.111 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.449 -0.449 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 0.000 0.000 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 8.9902143 13.9729039 5.7412620 9.4461929 NA 10.6665549 NA NA 8.9079332 8.8137376 NA 8.8783213 NA 11.1857723 9.8866081 3.7412620 5.9326872 9.3827760 8.3631150 11.1402935 9.6371597 6.8716576 11.8244170 NA 7.1864441 9.5360282 2.9241189 0.5317682 11.0105773 -0.4681320 12.9366832 12.1246151 8.2077645 9.7491596 9.5714123 9.8942995 3.1756683 0.8537562 NA 4.9912406 7.6005857 10.3123475 9.4588448 2.3391659 8.7740767 6.8446907 10.1638942 6.7461273 9.4258675 NA 8.8660811 3.1167640 3.8172139 9.3975409 6.8316113 8.4129216 9.0386112 8.3551749 10.0538987 1.9912452 13.6345626 0.1167640 10.4805399 NA 6.7702119 3.4860064 8.1409867 7.7142022 12.812793 4.531806 8.696715 11.271166 9.452503 10.740347 12.458938 12.891351 8.903584 10.501194 12.444884 8.266517 8.593854 6.978891 4.554177 7.286695 12.055492 11.090946 5.932687 8.893751 9.103560 7.628707 10.643925 6.438699 9.774982 10.021154 6.023661 6.559714 7.921977 7.640828 10.891008 9.843556 7.345589 8.974751 8.866081 9.054389 9.367069 10.401016 10.546177 9.747341 10.386287 8.475788 NA 9.044894 6.858237 8.676466 11.113479 8.157517 10.615952 10.426625 7.342380 14.133346 10.162985 10.149275 11.556774 10.898949 9.536028 3.817214 TCGA-A8-A06T 74 0 NA 1614 breast stage iiia t3 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 1 1 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 8.343418e-08 12.77795958 5.48733842 6.47872433 11.49856453 -0.31994575 11.59921810 -0.90508835 10.39164927 11.86289391 11.51655874 10.28946886 7.20876207 8.65630794 8.83564401 8.10344833 8.94442481 10.71890134 9.32923843 6.58687281 3.09501296 10.81675992 8.49162465 13.19752870 10.49055399 9.50069312 10.44816670 6.24983782 10.83814390 -0.31994575 0.41694780 7.83311210 9.36648287 13.38154150 7.63417867 13.51741317 13.15908891 9.75501574 4.98983838 0.41694780 6.07801414 8.18909759 6.32383840 6.34294758 13.34034970 3.64960396 8.61858189 13.93488792 2.95300443 9.97308989 11.37012586 8.61563846 5.13941219 0.09504672 14.61171725 8.74965594 0.09504672 7.90237451 NA 3.82294424 10.32534054 9.72346539 11.76135480 10.60553674 10.32173309 9.26369197 0.09504672 11.94050987 9.63660052 6.39422773 7.91519879 4.32383840 12.23000758 13.95746348 7.81223379 12.79686774 11.36837834 8.38042210 0.90234376 2.48733199 7.70049937 9.19107600 10.66748326 -1.90508835 6.04921689 7.71707180 10.04921621 11.39580139 4.22430273 6.14486826 4.45256908 8.86568379 11.43459153 1.55444151 13.49749900 7.06943473 7.68185964 10.33402160 11.77823380 12.36794117 8.25110269 10.77911096 11.01853306 10.84916408 10.80668680 5.01388205 9.09713170 11.55483564 11.24429063 NA 10.06764073 9.34176053 -0.90508835 3.48870780 9.28669590 10.64480454 8.85989130 9.07801334 14.95688217 10.31721101 10.93146471 9.15436422 -0.90508835 15.47766919 8.89915085 11.22446384 10.05248464 10.49082170 9.52285651 8.90398395 10.64908585 -0.3611300 0.0967980 0.1110800 0.0000000 0.0000000 -0.3415900 -0.3451500 0.0290440 -0.8069100 -0.1638300 -0.6846000 0.5374900 0.0387710 0.0387710 -0.3304000 -0.3304000 -0.3304000 -0.7903400 0.1243200 -1.2098000 0.0339720 0.0423070 0.0256710 0.0256710 0.0256710 -0.3902900 -0.3902900 -0.3902900 0.0488300 -0.3611300 -0.3611300 -0.7519300 0.0000000 -0.3415900 -0.3415900 0.0689520 0.0689520 0.0290440 0.0833420 -0.8033900 0.0408920 0.0391950 -1.2105000 0.0836060 0.0836060 -0.7782100 -0.7840600 0.0387710 0.0387710 0.0660860 -0.7830200 -0.7903400 0.1243200 0.1243200 -1.1784000 -0.7860600 0.0423070 -0.7980300 0.0256710 0.0256710 0.0441480 -0.3902900 -0.3902900 0.0488300 0.0070826 -0.7936900 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 0.000 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 0.000 0.000 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 0.000 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 0.000 0.000 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 8.2371268 12.0037877 1.7954761 8.8615488 5.7495852 10.6070195 2.6799867 -1.9050884 8.7771366 8.3153982 NA 6.9429226 3.2649417 9.8971322 9.1711673 2.0950130 7.5379631 9.3635618 5.1284419 10.8191073 9.7307018 7.5888750 9.8808809 1.9023824 9.1187742 9.2636920 2.3429529 0.9023438 10.4851888 2.9023824 12.1992090 11.6958620 7.5605866 10.5851186 9.6161294 9.2210791 0.9023438 1.2649567 -0.3199458 3.8499092 9.6827973 9.3459104 11.8508463 3.0950130 8.1598839 7.7727395 10.8853683 6.6224970 10.2012556 -1.9050884 13.0749362 3.2243027 4.3044745 9.8002159 6.9118749 5.1173875 8.1557158 8.0433872 8.8967281 0.4169478 13.6815371 -0.9050884 10.4784542 1.6799642 5.9653849 5.2548926 8.5452000 8.9247424 13.3717985 5.7023500 9.1950252 13.5174132 9.0250991 11.2891611 13.3403497 13.8071706 9.1864552 10.5014906 13.2809793 9.7603557 9.1910760 8.8524100 0.6799642 7.9389409 10.9590125 10.154702 8.350049 9.538999 9.322034 9.223659 9.403683 6.452572 6.430411 10.490554 5.352409 NA 5.234570 7.548249 9.547261 9.907197 9.543007 8.696791 12.981812 6.554451 11.761355 9.931859 11.821664 9.119467 9.994377 8.470059 2.487332 8.494565 5.570754 6.066563 11.395801 6.645766 9.983763 8.865684 7.558544 12.871965 10.556755 9.990974 12.395301 9.565170 9.045576 3.182486 TCGA-A8-A06U 80 1 883 NA breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 3 1 NA 1 4 2 1 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.24885e-06 4.162835e-07 12.8526724 2.7251304 8.0660305 11.1975254 NA 9.4760866 0.2226809 10.1777985 11.0743819 7.1335255 9.9015264 6.5324884 9.9612882 8.9032854 5.1612307 8.4058545 10.3105377 9.2905154 7.2338603 6.4385707 10.3579146 9.2851289 14.0219482 11.2044380 9.6206639 10.5983964 6.0722988 11.2301274 NA -0.3623434 7.6875192 10.8994715 11.3175903 8.2869264 13.6164255 13.1077573 8.5684076 3.9595940 NA 7.3825039 9.1729457 10.1666128 6.8025771 12.9784941 NA 10.2860279 14.3118351 5.0806150 9.5539157 11.4470366 7.0929981 6.2815258 0.2226809 15.7635339 10.1739176 -0.3623434 8.2018201 NA 4.0639343 9.9097169 10.0597352 10.2860279 9.5632249 9.9996142 9.4618336 1.2226191 10.3933925 9.6895590 7.0971019 8.0681231 0.2226809 10.7458681 14.1761019 7.2056261 11.0329368 11.6245790 8.7592038 2.5445596 3.2815202 8.4091597 10.3346379 10.3096537 NA 4.5445596 6.3519163 9.1345241 10.6267100 5.2075259 5.9322904 5.4831612 9.9311420 12.2128551 2.6376798 12.5948631 6.5976727 7.6034550 11.3634627 12.9974886 12.7347972 8.1395074 10.6131601 9.2615520 8.9267787 10.8434636 6.1999138 8.5111146 11.1874551 9.9924708 -0.3623434 10.8262592 8.8459046 -0.3623434 3.0334230 10.3302859 8.4108096 9.1234996 10.0353450 15.2823153 10.6956621 10.1782828 10.2742950 2.0971051 15.7072985 5.1768294 11.7674364 10.2801734 9.7257960 8.7238067 8.6710934 10.1477027 -0.74398000 0.15811000 0.37331000 -0.80368000 1.98730000 0.43868000 0.11204000 -0.02955300 0.31081000 0.65443000 0.07024300 0.84376000 0.27080000 -0.35795000 -0.02233200 1.97260000 0.00000000 0.02964100 0.48113000 -0.75262000 0.07829400 -0.34927000 -0.39297000 1.47740000 0.60666000 -0.15023000 -0.08479300 -0.08479300 1.31060000 -0.37403000 -0.74398000 -0.10473000 -0.78707000 0.02272500 0.04315700 -0.06088300 -0.02753500 -0.01849000 0.01147600 0.33150000 -0.84499000 -0.75780000 -0.75633000 -1.08740000 -1.29290000 0.00093255 -0.06645100 -0.35795000 -0.41887000 -0.82725000 -0.26143000 0.02964100 0.03232400 0.42486000 -0.75262000 -0.40318000 0.05836700 -0.38739000 -0.39297000 0.06680200 -1.18050000 -0.15528000 -0.08479300 1.10610000 -1.19460000 -0.40405000 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.744 -0.407 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.744 -0.407 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 8.4008829 12.6965077 8.6956623 9.3250461 2.3688521 10.6844534 -0.3623434 0.2226809 8.1748887 7.9908170 1.2226191 7.6550913 4.0639343 11.3787160 9.2235719 3.8855939 6.8664889 9.9397380 11.0940248 10.6352027 9.2945867 7.9595986 10.1454650 0.6376566 7.6263552 9.4618336 1.4450380 0.9596218 10.3043382 1.8076022 12.4242463 12.2262679 7.3311570 9.8778654 9.5542963 9.8330427 4.1612347 1.4450380 0.6376566 -0.3623434 9.1414961 9.9764067 10.2169864 3.2226346 9.3415826 8.2905152 10.1690519 5.1454655 10.0971021 -0.3623434 11.4751012 1.6376566 3.8471250 8.9077788 5.7888397 5.8950578 8.7343855 8.4141034 7.5172536 2.0971051 13.8123230 NA 11.0473265 NA 8.9764069 4.0971051 9.2851289 9.1315260 14.0549556 6.0470606 8.4434144 13.6164255 9.3415740 10.8832231 12.9784941 13.0250819 8.9734626 11.0202944 12.7178217 10.4749040 10.3346379 9.0083577 0.2226809 8.6404854 11.3189088 11.1634359 6.0888815 8.4768742 8.8688917 9.0018051 10.0748242 6.3992224 7.6572613 11.2044380 6.2958828 -1.3621579 6.0806129 8.0839680 10.0078129 10.0602608 9.3398431 8.4353319 12.6921899 6.5801847 10.2860279 10.4784483 11.9934344 8.5918668 10.5210773 9.6299006 9.0449380 9.2685563 6.9853809 6.8422410 10.6267100 6.0888815 10.5680381 9.9311420 8.1999128 12.7008969 10.6915963 10.4108096 12.8597860 10.1305250 9.4578493 0.9596218 TCGA-A8-A06X 77 1 943 NA breast stage iib t3 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 4 NA 1 4 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.405667e-06 1.352921e-06 11.744705200 3.514210650 7.114774079 11.476230589 -1.009262921 10.196446108 NA 9.373276920 11.731487647 8.402163631 9.965784285 7.416917413 9.632704448 10.577492653 6.939019657 9.609955848 10.072801865 9.835358516 6.078116642 3.634511955 9.732119759 10.046613015 13.808286074 10.785474783 9.187869420 10.518618440 5.704899623 10.157443575 -0.009408127 2.691087441 7.330502828 9.371113832 13.211937848 7.150524137 12.964350201 12.895287453 8.880917202 4.482506280 0.575602777 6.583109853 7.804433729 9.833788729 12.829955054 12.468916854 5.365692537 10.586842602 14.615762326 NA 7.927290859 10.280095422 6.663078431 4.848632955 -1.009262921 15.106342512 9.733804265 1.312607093 7.119936085 NA 3.238572885 10.056068924 9.893781439 8.437736262 9.732119759 9.939020098 9.088684901 1.312607093 10.280095422 9.912493738 4.745538535 8.250396016 NA 13.016830429 14.520845772 7.956840765 11.005022084 10.262115875 10.297853654 0.575602777 7.470432743 8.303535560 9.743033550 10.169317739 -1.009262921 5.312581682 8.035047046 9.732962258 11.477236485 5.365692537 5.482506280 6.303536017 9.916207308 11.844936860 5.450082895 13.309760403 3.691087441 7.018558513 10.619553961 13.722714233 12.879871568 8.596132345 10.327717113 11.101462366 10.252636105 11.091643643 4.276057388 8.634509051 11.802428880 10.191551424 NA 10.402163845 8.677153374 1.312607093 3.097509670 9.217064913 9.920650892 11.439285382 8.367863326 15.358033449 9.832217232 9.664845104 7.533684814 0.575602777 13.348410995 6.433597125 11.781612163 10.612246881 10.291577314 9.431522049 8.233826720 10.454049500 -0.0077672 0.6311400 -0.0372370 0.4461000 -0.0012663 1.4814000 0.4371400 0.4464400 0.4469500 -0.4349700 0.0073418 0.9281400 1.0567000 0.4527300 0.0144500 0.0144500 0.0126900 -0.0065240 -0.0132830 -0.9349800 3.6569000 0.4432200 -0.4511600 -0.4402800 1.7763000 0.6267600 0.4417000 -0.0460600 0.0049722 -0.0077672 -0.0077672 -0.4720600 -0.4474000 -0.4515900 -0.4617500 -0.4527700 -0.4406100 0.4379800 0.4469500 0.4224800 0.4685000 0.0227050 -0.9396200 -0.4559900 -1.2929000 -0.4303000 -0.4314200 0.4527300 -0.4168600 -0.5858000 -0.4260500 -0.0065240 0.0483840 0.0173850 -0.4412500 -0.4476200 -0.4375800 -0.5478500 -0.8804800 -0.4570600 -0.4447100 -0.4889100 -0.0460600 -0.4416900 0.3947700 -0.4303000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.448 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.871 0.000 0.000 0.000 0.000 -0.409 0.000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.448 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.871 0.000 0.000 0.000 0.000 -0.409 0.000 7.666609617 12.933442219 4.382971528 8.474468492 0.575602777 10.959679535 1.312607093 -0.009408127 8.007461272 7.312580774 NA 8.988044136 6.190324475 11.221273778 9.486507840 1.798009028 6.088684372 9.008852964 6.829857169 9.681523760 9.474166283 6.663078431 10.332727511 1.575602777 7.478492984 9.088684901 0.575602777 NA 9.738845677 0.575602777 12.297426565 12.315817730 7.433596290 10.381359196 10.653321163 9.584043993 3.848637962 2.160565278 NA -1.009262921 9.662193926 9.513234311 6.013020004 1.575602777 8.950857672 9.236205582 10.684575329 6.285272740 10.682396320 NA 11.509797614 2.691087441 4.276057388 9.642206788 5.589374003 3.382971528 9.191551547 8.433596290 6.490497930 2.450089496 13.855322630 -1.009262921 10.562879378 NA 9.332727399 5.013020004 8.668372329 8.902044930 13.168360 7.195224 9.074132 12.964350 10.991709 10.559559 12.468917 12.055227 9.096561 10.758837 12.953549 11.099177 9.743034 7.474468 NA 8.592424 13.354582 10.3035358 5.9793372 9.2967146 9.1250792 8.3495895 9.8808259 5.8108312 6.5528950 10.7854748 5.9793372 1.9906645 4.6053639 8.2949814 10.2362056 9.8877420 7.4211055 8.4418640 9.1718050 6.1404003 8.4377363 10.2445004 12.8291674 9.5365825 10.0157923 9.8274921 1.7980090 9.7079523 5.5452425 4.9906509 11.4772365 6.8610174 10.3293893 9.9162073 7.7785555 13.4793089 10.9693633 9.8664022 11.5305386 10.4875066 9.0647942 0.5756028 TCGA-A8-A06Y 66 0 NA 791 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 1 3 NA 1 4 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.39057e-07 12.8626327 1.0500489 7.2788731 11.2477624 NA 9.4577469 0.3131297 10.0889733 11.0429926 8.4058456 9.9843349 6.4423713 9.1215167 8.4268308 5.3863385 9.4946550 9.5915381 9.8886279 6.9949123 NA 9.6794110 9.8116056 14.6339597 10.7823913 9.4921685 10.6761283 2.5354807 11.0441248 NA 2.5354807 5.5354807 9.8936613 12.9747183 6.8470674 13.1600155 12.6134412 8.3280389 7.8022675 4.8366513 6.6168693 8.4040831 11.6357679 4.6107709 13.0242537 1.3130717 11.3615755 14.3911283 6.1118305 9.6671618 11.0062852 8.6000315 6.6046437 -0.2719489 13.4720123 6.9326978 2.0500489 6.8208835 NA 4.0135248 9.2369114 10.3773823 10.3974542 10.2817555 9.9228830 8.8274739 -0.2719489 11.2655873 9.8873669 4.7281273 9.2989307 1.5355056 11.9409265 13.8155890 7.5774689 11.4443026 11.2349296 9.6779528 -1.2719489 6.7834082 8.4509337 9.0713119 11.6094314 -0.2719489 5.2359223 7.4216130 9.4679067 10.4679068 2.6350114 3.5861042 4.1543888 9.9689174 11.4473011 3.7281273 13.2595685 6.2903691 7.1031661 11.4417275 11.4714880 12.6481068 9.2269754 10.5257877 9.9689174 9.9134661 9.9271851 4.2516888 8.4093646 11.9078798 11.2563361 1.0500489 9.9837449 9.0612815 NA 3.3136957 9.1480863 11.3674669 10.4560466 9.6145849 14.7775919 10.2413603 9.9742729 8.3093267 1.8980535 14.4981189 7.2199797 12.3716442 9.2038596 10.2841532 8.9351406 8.5403036 11.1303122 0.450200 1.620800 1.643500 0.098997 0.098997 -0.282510 0.107890 -0.255640 -0.255640 0.391810 0.391810 0.376440 -0.050100 -0.050100 0.000000 0.000000 0.000000 0.117410 0.088982 -0.281560 0.091300 -0.854160 0.096670 0.096670 0.096670 0.078727 0.078727 0.078727 0.616970 -0.858920 -0.865540 -0.360090 0.098997 -0.282510 -0.290200 0.091925 0.086984 -0.255640 -0.255640 -0.258660 0.105700 0.105700 0.391810 0.077142 -1.292900 -0.868390 0.094201 -0.050100 -0.050100 0.000000 0.000000 0.117410 0.088982 0.118290 -0.281560 0.091300 -0.854160 0.359530 0.096670 0.096670 -0.869470 0.078727 0.078727 0.616970 0.104970 -0.875000 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 -0.866 0.778 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 -0.866 0.778 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 5.7168099 12.5523888 2.7281164 9.6107693 3.2180527 10.8323973 NA -1.2719489 8.9533336 8.0455385 1.7281382 7.4695930 2.0500489 10.0545556 9.1554391 -0.2719489 3.8155857 9.7649867 4.8778718 10.0347576 9.4219878 7.5954052 10.7755909 0.3131297 10.7298862 8.8274739 2.8980535 2.1875461 10.3561160 1.0500489 12.7263640 11.7834086 7.3168408 10.2677696 8.7504940 9.4076062 2.1875461 1.0500489 NA 2.1875461 9.8791427 9.8122702 9.6654999 1.3130717 9.9291718 7.4492254 10.3298970 4.7942131 10.1512421 NA 13.4433911 NA 5.4963089 10.0785184 6.7303791 NA 9.5845516 6.8155895 3.8574138 2.3131007 13.9336140 NA 11.1630150 0.7281382 8.2516883 5.9375798 8.3683711 10.1783064 13.051844 6.522542 8.890518 13.160015 10.475060 11.821048 13.024254 12.133534 8.948504 11.087327 13.770341 11.618010 9.071312 9.225978 -1.271949 6.903052 11.788991 10.7025408 7.4763193 8.3017733 8.6632912 7.8261582 10.1285414 2.8980535 7.4560463 10.7823913 4.6107709 -1.2719489 6.8676778 7.2651893 10.9984215 10.5241658 9.1834533 7.8340349 13.9793497 2.3131007 10.3974542 10.6484790 11.4047445 9.6888521 10.7459785 9.1139885 NA 9.0359417 5.2038589 0.3131297 10.4679068 4.4005516 10.4969308 9.9689174 6.9855141 13.5107661 9.4813429 10.6570146 12.6899376 9.9098995 10.3805231 -0.2719489 TCGA-A8-A06Z 84 0 NA 31 breast stage iib t3 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.140267e-06 3.059253e-07 11.64010550 2.10644883 7.77385658 11.65616026 -0.39611852 11.05805980 0.01891898 10.41074993 12.19303678 9.90695146 9.61888228 7.58311888 9.67807331 8.71767402 8.84710591 8.79786770 10.86817898 9.35100590 5.66282643 2.66282074 11.01632527 8.96806655 14.20672738 11.40658285 7.90771270 10.48962823 2.18890727 10.47813973 NA 1.47840238 6.26689708 9.59450862 12.01861710 6.31817763 13.38300140 13.49146983 9.89048956 5.48657602 2.01895458 2.97317041 7.65196439 9.94674738 6.46605280 13.25718748 1.01899018 9.89855257 12.83084576 1.34090403 10.30319202 11.60111135 8.14696369 7.74859004 0.34084708 13.37289083 8.24417686 1.34090403 7.51881522 NA 4.58882255 10.03403588 10.62166821 5.43682146 10.55521663 9.70809375 9.36714432 0.01891898 11.41717863 9.93148451 6.81338488 7.66282572 -0.39611852 11.27576776 14.30111665 8.69463543 7.35212466 11.39658664 6.97316582 0.01891898 7.25976115 3.82632476 9.32901413 9.84710591 0.01891898 3.66282074 7.87227903 9.28341205 10.81338520 9.88702027 5.18889540 5.12749297 10.20570260 11.58097324 1.01899018 13.06349157 7.58311888 8.72719110 10.87617281 11.11913891 12.48159943 8.55618759 10.24417686 10.51906427 10.10941267 11.76148936 5.45359659 8.64467829 12.66715841 10.59521747 NA 10.34061567 9.88663428 -0.98108102 2.41129065 10.05960161 7.89395067 9.52180123 8.80360420 15.51791921 10.89010457 11.08303847 9.35156539 0.34084708 16.14561335 9.07289523 11.22796575 9.60580913 10.01402982 8.50479873 7.97316582 10.84898341 0.583400 0.583400 0.589190 -0.573030 0.538010 2.482800 0.597100 -0.581030 -0.567140 -0.952750 -0.952750 1.637400 0.041741 0.034966 -0.314820 0.593860 1.755000 0.028763 0.812980 -0.565250 -0.489630 -0.538040 -0.509290 0.583990 0.583990 -0.533680 0.010146 0.010146 0.658850 0.583400 0.583400 -0.545490 -0.577430 -0.076278 -0.563760 0.577010 0.577010 -0.563060 -0.567140 -0.603220 0.558330 0.037641 -1.164900 -0.546330 -0.546330 -0.543000 -0.578320 0.034966 0.052383 -0.314820 -0.571820 0.028763 -0.339410 -0.339410 -0.565250 -0.489630 -0.538040 -0.552940 -1.292900 0.583990 0.218830 -0.533680 0.010146 0.047410 0.616790 -0.339820 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.573 -0.098 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.573 -0.098 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 6.36769780 11.07848282 3.97316122 8.30783559 1.90650583 10.48453574 NA NA 8.66282572 6.46605280 NA 5.44674256 NA 11.21079972 8.82067776 0.01891898 5.10643208 9.32103696 7.92435647 11.33539231 9.88119596 8.00623350 10.94489460 2.01895458 10.45568086 9.36714432 -0.98108102 4.94970767 10.93129738 2.34090403 12.15347591 13.22926021 6.29509299 10.47146804 7.98331002 9.83914835 1.34090403 2.10644883 NA 6.69139458 8.71071278 9.81946494 10.31760481 0.82635527 9.39026678 6.90771270 9.61002416 6.43259702 9.97352920 NA 11.35114579 -0.98108102 6.42836017 9.70797146 6.61538245 -1.98108102 8.77385691 7.03019701 5.63367823 -0.98108102 13.79118083 1.01899018 10.75769502 NA 5.09578521 5.29509483 8.53368326 5.32275020 14.791498 5.691395 10.790046 13.383001 9.765903 10.974801 13.257187 13.944014 9.620740 10.444710 12.351985 9.353801 9.329014 8.978247 -0.981081 7.801968 11.156601 10.1225850 7.6610213 9.4325972 8.3820092 9.6015818 9.5880986 5.0850592 3.6914002 11.4065829 6.0904322 2.2669064 5.1988791 7.6300494 8.5503509 9.5459576 8.3588195 9.2519898 12.5450406 1.6039289 5.4368215 9.8569914 11.6560470 9.1288001 10.4517722 9.1540373 NA 9.0035873 6.4241108 0.8263553 10.8133852 4.2284262 10.2585679 10.2057026 7.8664963 14.1031134 11.1720463 9.3089883 12.8145525 9.1229129 9.2435741 -0.9810810 TCGA-A8-A075 42 0 NA 518 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 72.63.0 6 3 4 3 1 3 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.334947e-06 4.727937e-07 11.5358414 4.2206937 7.7963765 11.2308433 NA 10.5110651 NA 9.9975044 11.6331802 10.5237700 9.5174316 6.8421806 8.4598312 9.9766065 6.1784637 9.7388153 10.3559078 9.9694008 7.3626023 5.8056536 10.1878072 10.3440173 12.7091499 10.1285068 9.6365960 10.7925902 6.9253930 10.6488071 NA 3.2206859 8.5103559 11.1148099 11.9537071 7.4089954 12.2173282 12.8416165 9.0661818 3.4744490 -1.4795526 6.6235392 8.9663015 7.5863414 6.6182842 13.1808051 1.9796961 10.5656705 13.5192391 7.0438136 9.0788641 12.2694930 7.3211515 7.5174316 1.5202462 14.2963532 8.7586570 3.2751412 8.6248506 NA 6.7776393 10.6258332 10.2659264 9.6559614 9.7592539 9.7987015 9.6385443 0.8422146 11.0243262 10.2667664 5.3657415 7.7026465 10.1248053 10.4413491 14.7320643 9.1749506 11.0993322 10.7125449 7.8399243 1.3276299 1.6901936 8.8044979 9.3146680 10.1997322 NA 5.6598047 8.5957312 9.0574706 11.2332089 6.6077150 6.6339949 5.9211316 10.4740847 11.5917144 3.9796870 13.8183146 5.8240321 7.3179136 11.3300202 12.5425332 12.9237302 7.7466641 10.8725714 10.4120357 9.7649132 11.1070918 4.4271435 9.3171028 12.3299197 9.1595929 NA 10.5213083 10.1326599 -0.4797538 3.3296690 9.6926797 8.6248506 9.6090404 9.3618164 14.8479450 9.9007132 10.7041975 7.8489271 0.1052758 15.1360110 10.3097857 12.1280447 12.3176096 9.8257438 8.7538716 8.8466817 10.1542871 -0.4559700 -0.0049844 1.2027000 0.3375500 0.3056900 0.3590400 1.0498000 0.3356300 0.3301100 -0.4889000 -0.4889000 2.1150000 -0.4764900 0.3535900 0.3440600 0.3664100 0.3664100 -0.4922500 0.7385300 -0.4500700 0.1873700 -0.0280810 -0.4360700 -0.4360700 -0.0089906 -0.3917400 0.3841900 0.4051100 0.4056100 -0.4559700 -0.0354480 -0.0789430 -0.0496950 0.3521800 -0.0557690 -0.9248800 -0.0770420 0.3356300 0.3301100 -0.5081500 0.3416100 -0.4808100 -0.4889000 -0.4553300 -0.4553300 -0.4553300 0.0840650 0.3386900 0.3473000 -0.4745900 0.3210900 -0.4712000 -0.0804850 -0.0406160 0.3972800 0.5967400 -0.0280810 -0.4295300 -0.4360700 -0.4360700 -0.4830200 -0.3917400 0.4051100 -0.0377620 0.1604000 -0.4383200 0.354 0.354 0.344 0.344 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.236 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 -0.135 0.354 0.354 0.344 0.344 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.236 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 -0.135 8.7598506 13.4753116 6.3016114 9.8500483 4.2751412 11.1855880 -1.4795526 NA 8.1926775 8.1623037 1.1052087 7.6626143 2.3276011 10.3007918 9.1377195 3.8778031 8.0477292 9.2942155 10.3606366 10.6294298 9.9196048 8.1070920 10.2788917 2.2207014 8.6826435 9.6385443 2.8421743 NA 11.0090964 0.1052758 12.5705259 12.2262084 6.5426202 10.2464702 7.9125696 9.2999715 4.3782342 2.8421743 0.8422146 8.6339942 7.7442540 9.1331206 10.5478125 3.2206859 8.6845432 8.3531420 9.9616401 6.2684456 9.3727815 NA 10.0839250 3.2206859 3.2206859 8.7902788 6.1808182 8.3766776 9.6469565 8.6725371 10.3475948 1.1052087 13.6972043 1.5202462 10.4719010 NA 9.6004034 3.2206859 8.7975396 9.2198246 12.541584 5.903957 9.067147 12.217328 9.963714 11.434076 13.180805 11.405948 9.472826 10.307338 12.348389 10.743047 9.314668 10.141846 1.327630 7.545392 11.054798 11.4435796 3.2762138 8.6248506 8.7681797 8.3308237 10.6938980 7.1312767 8.9465168 10.1285068 7.1238783 -0.4797538 5.6287765 8.2300767 10.4480301 10.3971526 9.4322431 9.2566541 9.5775669 9.0786728 9.6559614 10.5223639 10.4454356 9.8843867 10.8841130 9.5598566 0.5202462 9.4442331 7.5060941 8.8931170 11.2332089 8.0181039 10.2460444 10.4740847 7.8867928 13.6325694 10.1482418 10.4594640 12.2774337 10.7714385 9.9412649 3.5646464 TCGA-A8-A076 66 0 NA 1642 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA 3 3 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-06 1.668684e-07 11.8066450 4.7341568 6.5252123 11.0841790 1.2583983 9.7696837 1.2583983 9.9081305 11.2353472 7.9623286 9.9090281 7.9379052 8.0512155 9.6038303 7.2668540 9.6940954 9.2640496 10.3986159 7.2527790 3.6159812 9.7055083 9.1832376 14.7576482 10.5913009 9.4296019 11.0589206 5.0528419 10.2510095 -1.7417826 2.1653010 8.5507468 10.7552789 12.6865975 8.0641688 15.7722221 13.7816502 8.8629782 5.3245154 1.4283568 5.7582712 8.4370900 7.7741248 7.4678786 12.8797902 2.1653010 9.6794380 12.9798448 0.5803385 8.9271151 11.0831850 7.9290814 7.1441218 0.5803385 14.2431286 9.0568726 2.5803626 7.0817923 NA 4.4678794 10.1456457 10.8666800 9.2213213 10.0821904 10.3442295 9.3702129 3.0133193 11.3590875 10.5593497 5.3458895 7.9449258 2.5803626 10.1023462 14.7678445 7.9222680 10.8050785 10.4902463 7.9076815 3.4283568 3.4678794 6.9308509 8.7280671 10.8084504 1.5803385 6.9657843 7.4678786 9.1395391 11.0064083 8.5426709 6.6635666 5.8950505 10.1082211 11.8597317 6.4531817 13.8058318 5.6159783 7.3721677 11.9616799 13.7644847 12.7503409 7.7280668 10.6969571 10.5051658 9.8262957 10.5374553 5.2918466 7.7780614 11.6518156 9.6038303 -1.7417826 10.2449782 9.3298876 -0.7415414 3.5017958 9.7452602 10.4751710 9.4189270 9.7270491 15.2928158 10.0928963 10.5879412 7.9484233 1.5803385 15.1468711 9.6170764 12.5856269 10.7915115 10.4135596 9.7452602 9.3557988 10.6866623 -0.02972100 0.69858000 0.00227710 0.00138680 -0.02315400 0.02496900 0.05922300 0.36264000 -0.35704000 0.53907000 0.53907000 1.69300000 -0.37076000 -0.34733000 0.00013863 0.00013863 0.00013863 0.36149000 0.36313000 -0.73573000 0.36559000 -0.35768000 -0.73389000 3.65690000 3.65690000 -0.12875000 -0.12875000 -0.13678000 2.56620000 -0.73705000 -0.02972100 0.00000000 -0.00013862 0.02496900 0.02496900 -0.69178000 -0.30798000 0.36264000 -1.10330000 -0.35704000 0.42553000 -0.29627000 -0.72367000 0.00638710 -0.73652000 0.01377200 0.01377200 -0.34733000 -0.34733000 0.00013863 0.00013863 0.36149000 0.40094000 0.36264000 -0.73573000 0.36559000 -0.35008000 0.01195800 -0.73389000 -0.72332000 0.00638710 -0.12875000 -0.13678000 1.08190000 0.50012000 -0.35578000 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 8.3992548 13.7947027 2.4283568 9.7260308 1.9499457 10.9359246 -1.7417826 NA 7.9675087 7.8950499 NA 8.7602622 -0.7415414 10.3973369 9.2471098 3.1163980 6.9692311 10.2594814 10.2260117 10.6394273 9.8604836 8.8254304 10.2615917 -0.1566593 8.9255366 9.3702129 3.4283568 4.1653171 11.9157436 2.7819891 12.2072486 12.1147534 7.6399679 9.5357126 10.2527786 9.6099165 9.5775327 2.0657791 -0.7415414 7.3564573 9.1630599 9.4420606 11.0837815 3.4283568 8.4072703 6.4920454 9.5673329 6.6115723 9.2987149 NA 10.0120598 3.0657791 3.1653171 9.1588164 5.3406798 5.5713067 8.6752228 8.8452648 9.2256514 NA 13.5139701 0.5803385 10.8386837 NA 7.7219495 3.8130115 8.5993881 8.1023463 12.8601379 5.9931354 8.5915807 15.7722221 9.7951580 10.3261956 12.8797902 11.9073444 8.9536535 10.6992943 13.1577821 9.4239603 8.7280671 9.0897325 0.2584586 8.8072470 12.3844036 11.181195 6.084974 8.913956 9.271748 8.203869 10.977031 6.730101 9.814931 10.591301 4.930851 1.258398 4.580351 8.437849 10.451951 10.140686 8.186203 9.249947 10.320134 6.443300 9.221321 10.742996 10.549596 9.105482 10.841508 9.584855 -1.741783 9.628360 7.508368 5.958866 11.006408 8.944050 9.806125 10.108221 7.627368 13.332734 9.550172 10.338577 11.860312 10.662236 9.902281 3.467879 TCGA-A8-A079 69 0 NA 274 breast stage iiib t4b n3 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 3 4 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.621532e-07 2.503025e-07 11.6590522 4.3213148 6.3811882 11.9368998 -0.5612813 10.1597731 -0.5612813 9.6315831 11.6922259 8.8565264 9.9088243 7.4159538 10.2056168 9.3597709 8.0515423 9.3545533 10.1661690 8.4980182 6.2002258 1.8980922 10.2703770 9.3174911 12.4131781 11.1889621 8.7031166 10.6226194 5.0385854 10.1931439 NA 1.0236102 7.2715639 10.2993729 12.9672501 5.2330904 12.2052028 13.0928623 9.8374176 7.6505621 3.4386788 7.5367057 8.8028084 9.2849478 6.8857574 12.8454768 NA 11.2500485 14.5546725 8.2492453 9.8892253 12.3804551 7.5934920 4.4830676 1.0236102 13.0687828 9.7136285 0.4387187 7.7918206 4.1110981 3.7962240 9.3612582 10.5061082 9.6469082 10.5432726 9.1382462 10.1733834 2.3455667 11.0556821 10.2628370 6.3575379 6.6334312 3.7240718 11.2812206 14.7077823 8.3035721 11.8107227 10.7642604 7.9970948 NA -1.5614942 8.7862951 9.1682945 11.2480401 NA 4.5679591 7.2841643 10.5714949 10.3312167 9.2208530 5.3928703 5.9144067 9.0897256 12.0643827 1.7606042 13.5153642 5.3694106 6.5934927 12.1520604 12.5669099 12.7539650 8.9103492 10.6581450 10.9853272 10.2428049 11.1520604 4.8309905 9.2628371 12.0469287 10.2379555 -0.5612813 10.2927630 9.1597730 0.4387187 3.1402224 10.2448207 10.2676037 9.2958773 9.4216674 15.4703751 10.6578424 9.6680936 8.6469082 2.9622344 15.9653412 9.6142234 11.6412569 9.6254071 10.6076593 8.8363486 7.6060920 9.9853513 -0.415970 0.242500 0.242500 0.129250 0.064953 0.297580 0.245750 -0.396750 -0.943490 -0.755480 -0.755480 2.148500 -0.084262 -0.084262 0.285960 3.656900 3.656900 0.162650 0.162650 -0.775690 0.086956 0.000000 -0.313070 -0.367370 0.475980 -0.015054 -0.015054 -0.015054 0.732270 -0.487990 0.746700 -0.490260 0.129250 0.297580 0.159950 -0.015191 -0.015191 -0.937100 -0.452110 -0.415460 -0.184710 -0.301890 -0.353390 -0.270210 -0.270210 -0.270210 -0.270210 -0.084262 -0.084262 0.285960 -0.388730 0.162650 0.162650 0.162650 -0.775690 0.086956 -0.054960 -0.782100 -0.313070 -0.367370 0.172110 -0.775070 -0.015054 -0.405840 -1.179500 0.219140 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 -0.391 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.008 0.537 -0.270 -0.270 0.000 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 -0.391 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.008 0.537 -0.270 -0.270 0.000 7.8607388 12.1649985 6.0897248 10.6517781 3.9531162 9.5406496 2.5261440 NA 8.9942216 5.9385187 -1.5614942 7.1594657 0.4387187 10.5890559 9.5640874 4.5261377 6.3515630 9.8400868 11.8015766 11.2550576 9.6081042 8.3455645 9.2540571 2.9622344 9.6260260 10.1733834 2.3455667 -1.5614942 10.7191547 1.4386655 12.8515083 12.0630124 4.9932622 8.9001534 7.6358908 10.1088874 4.6481260 1.8980922 0.7606042 6.4216677 9.3979514 9.6716943 9.5221533 2.8981116 8.0188762 7.5020688 10.2672071 7.4073409 10.7124695 -0.5612813 10.8234576 3.1391093 3.8981019 9.3500808 7.1436148 5.8898848 9.0047278 7.7807484 10.9467162 0.4387187 13.9438341 -0.5612813 10.2403822 1.0236102 7.2428045 2.9622344 7.5287862 8.2950994 15.33584065 6.08253016 8.10578544 12.20520277 9.03393143 10.61764983 12.84547676 13.36659069 11.91444908 10.73673644 11.93027648 11.20520280 9.16829454 9.22249064 0.02361022 7.48852224 11.41326769 10.519491 7.966151 7.972004 9.466580 9.096885 10.087000 6.672294 4.166595 11.188962 8.511476 -1.561494 5.796227 8.057096 9.316725 9.258853 9.987977 9.944485 11.984483 6.252455 9.646908 10.588738 11.310579 9.091519 10.601380 8.590959 NA 8.798972 5.166595 7.012321 10.331217 5.392870 10.401570 9.089726 7.896055 14.683168 10.426648 9.141712 12.001393 9.653600 9.968592 1.438665 TCGA-A8-A07B 69 0 NA 1308 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA NA NA 2 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.283541e-06 4.85664e-07 10.5132721 4.8868330 6.9473739 11.7719192 NA 10.9694383 NA 10.6163081 11.3226520 10.5240789 9.4990169 7.9718688 7.8555818 8.7348298 5.7575487 7.6030402 10.7833816 9.3368658 7.0884671 0.7575354 9.7305297 9.1690609 7.8660747 11.1764567 8.6340668 10.2869805 5.0794763 10.8456756 1.3424979 NA 7.2811122 12.2337898 13.2646012 7.1151019 15.2198285 13.0125785 7.4990167 6.0243374 NA 5.7348288 7.8764912 11.8768153 6.1838140 12.6536931 NA 9.3293026 13.2556512 6.6644402 7.8246075 12.0099197 4.7117482 6.8660747 2.9274793 13.3770684 9.2332834 NA 9.7290935 NA 2.9274793 9.8343655 10.6401930 8.6793907 11.7628236 10.5616810 9.8634584 NA 11.9390128 10.4803574 1.7575354 6.3425121 9.0726994 10.2231164 14.2161488 6.6006548 10.7153775 11.9947599 7.8608374 1.7575354 6.5904403 8.0196447 9.3556024 12.1073840 NA 5.3121387 6.3869058 10.2573959 11.3937214 4.4014052 5.6401929 4.5124355 9.7044562 12.1874797 NA 13.8385340 0.7575354 6.7233347 11.7070119 12.6873631 12.8478278 6.3274053 10.0464160 11.1129010 10.2967087 10.8732438 5.1498690 7.6217361 12.8335304 12.5009117 NA 9.6092990 10.9136330 NA 4.2169825 10.2653445 8.1412545 10.0498716 8.2046333 14.8274192 10.3740988 12.6582281 8.3722596 6.1498670 14.5047988 9.6941879 12.1447595 12.3188379 9.6232833 8.5323368 9.2967088 9.4562546 -0.34618000 -0.34618000 -0.02425100 0.04174100 0.01241400 -0.42303000 0.04060900 0.02349100 0.08966300 -0.55957000 3.13330000 3.36990000 1.35150000 0.07254000 0.00000000 3.34390000 3.09650000 0.03002900 0.02004900 -0.83025000 0.06579900 -0.44113000 -0.81186000 3.65690000 0.57755000 -0.04888300 0.80305000 1.50450000 -0.35316000 -0.34618000 -0.34618000 -0.19358000 0.04174100 -0.34756000 -0.82032000 -0.00579470 0.00027728 0.02349100 -0.40252000 0.11404000 -0.84971000 -0.00733390 -0.55957000 0.01042400 0.01042400 0.00257000 -0.82773000 0.07254000 0.10862000 0.00000000 -0.81359000 0.03002900 0.02004900 0.07325800 -0.83025000 0.06579900 -0.44113000 -0.81318000 -0.81186000 -0.83752000 0.01670500 -0.04888300 1.50450000 0.42940000 0.01810300 -0.85082000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 7.8073987 12.5226288 8.8343655 8.6793907 5.0598701 11.0929403 NA 0.7575354 8.1838145 9.0636116 NA 9.0429521 2.9274793 10.4562546 9.0636116 1.7575354 6.2004926 10.6014710 9.9803448 10.8269997 9.0425590 8.8423582 10.4211080 NA 9.4246614 9.8634584 4.4014052 NA 11.9302899 NA 12.6481942 11.9541521 7.2573954 9.1477188 8.8236392 9.3140559 7.7519035 3.4579882 NA 6.3722591 7.1921784 8.1584294 11.0307627 2.9274793 7.7801395 4.5124355 9.6232833 5.9863677 9.8101180 NA 10.8926179 2.3425263 4.7575514 9.7802922 6.0340462 NA 8.3005818 7.8608374 7.8555818 0.7575354 13.7183664 1.7575354 9.8343655 NA 7.5713310 2.5649147 7.9022081 6.7117468 13.497120 6.327405 7.596754 15.219829 8.998341 10.269303 12.653693 8.216982 10.690503 11.130415 12.978382 11.168001 9.355602 10.034837 1.757535 7.551966 11.020232 10.947374 5.216982 8.952307 9.007848 7.855582 9.803760 5.886833 1.342498 11.176457 4.845013 2.757557 6.652367 5.683312 12.402758 7.751904 6.167789 9.202565 11.950767 4.149869 8.679391 10.471795 11.208761 8.983962 9.200493 8.700064 NA 8.670768 8.760365 2.342526 11.393721 8.288932 9.555211 9.704456 7.876491 13.764928 9.946139 9.609299 11.999831 10.862149 8.525734 NA TCGA-A8-A07C 57 0 NA 1034 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 4 4 NA NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.5731e-06 7.631864e-07 11.25134393 4.23901608 6.78970708 10.83704072 -1.91050185 9.90144468 -1.91050185 10.72928629 11.54857086 5.61283017 9.99765992 7.82058618 8.24787721 8.24155230 8.65055528 9.40950380 9.07866187 10.20496123 9.29689189 6.18202482 9.79748904 8.16608272 11.67246764 10.62600018 10.18235475 10.44241420 6.18202482 10.84206398 5.20820899 3.67423465 9.41119551 12.61184888 12.87818954 6.40215084 11.78938191 11.16056206 8.16875234 5.16608473 1.99617178 8.40554868 9.16072964 15.40280585 7.50500882 8.19909810 NA 8.88935824 5.50711911 9.48907925 8.74211235 11.37669118 5.56499999 5.61283017 0.41120928 13.02500654 9.87226548 1.25918208 8.62454289 -1.91050185 6.32288717 10.18894385 10.99314920 9.48533686 11.23885569 10.63447320 9.41738124 7.01407963 8.93318843 10.54997916 5.68172473 7.04926918 2.25918208 10.98635646 14.82623733 9.12477451 12.18631184 12.26894320 9.89137969 0.08922694 NA 9.63036397 10.61233914 11.93318839 NA 5.17672967 4.80351121 11.72373811 10.29322700 4.49865936 7.09489160 4.73312110 8.89581700 12.07626483 0.08922694 12.36043852 5.64385619 7.30358625 11.92817580 10.62162325 13.12981393 4.85745357 10.06833519 10.21112453 10.78601325 12.01055041 5.46169553 7.81718770 12.54889106 9.44406778 NA 9.23837942 10.35136221 2.54870788 3.64324436 10.93240324 7.92531766 11.64613259 8.54150864 13.94006461 10.49201299 11.39703736 8.23265068 -0.32572015 11.69324135 3.58112223 11.34074974 11.70616073 10.17108358 9.08078929 8.27290267 10.42683910 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4912134 11.9888131 6.2236928 8.1486118 2.5222316 11.6827752 2.4111822 -1.9105018 8.5801183 8.3072249 1.8966206 9.2870493 1.8966206 11.3858968 8.9795315 4.1553526 7.6303640 11.8356767 6.9749640 8.4965351 9.4340070 8.5113320 10.7625764 1.0892947 6.2491381 9.4173812 1.4112093 NA 9.4869420 5.3371937 12.2466932 12.5010431 7.3204883 11.4854707 7.6380890 9.5171040 6.1281862 3.1336622 0.4112093 0.6741894 8.9550006 8.7195346 8.8763536 6.1767297 5.8107773 3.8441546 10.6012670 7.9764879 10.4027173 -0.3257201 12.9942782 2.6742346 5.6049668 10.0446774 4.4284037 6.8474909 7.9810512 9.0913791 8.0434637 2.7897084 13.0198199 -0.3257201 9.5801182 -1.9105018 9.3998801 4.2987243 7.8804302 7.4201843 8.991680 8.145905 7.888549 11.789382 10.868166 11.120452 8.199098 11.232969 9.565507 12.048001 13.361095 10.935345 10.612339 8.175403 3.043467 9.236472 11.232332 11.540994 4.934757 8.973438 9.768308 5.197791 11.300136 6.662915 4.718625 10.626000 9.761693 4.411196 10.479705 8.847182 12.630485 10.802439 7.971910 8.192555 10.124066 7.955001 9.485337 9.157374 8.042008 11.833576 10.790141 10.158046 NA 8.701205 8.003652 7.925318 10.293227 6.171417 10.667508 8.895817 8.399414 14.194971 10.738523 11.026641 13.052841 10.872675 10.999723 3.259197 TCGA-A8-A07E 81 0 NA 608 breast stage x t4b n3a mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 8 2 2 NA 3 2 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456992e-06 1.387612e-07 10.7652041 9.9407658 7.2601678 11.2158424 0.5187365 9.9306356 -1.8033930 10.0893158 12.1928050 6.9781327 9.5187011 7.7609222 9.3654452 10.0694479 6.0547530 9.0233213 10.5090887 10.1476934 7.8797676 7.3841249 10.2229505 9.8802063 13.0072442 11.4844853 9.9637159 10.7186188 6.7966860 10.4994090 -0.2182626 3.2411690 9.1319380 11.8095263 12.2361204 7.8352091 11.9197939 13.1012665 10.1819034 4.3260555 0.5187365 6.8656578 8.2709143 9.5147507 7.4423257 12.5183488 2.9516624 10.7451133 12.5604286 8.4600422 9.1647197 10.6035094 7.5955163 4.2191375 -0.8031412 13.4326653 11.4252911 4.8406294 8.3890660 NA 5.5718133 10.2432149 10.9501986 9.4553389 11.4553390 10.4019553 9.7242500 3.0547617 11.9440219 10.1632785 5.0041283 7.5543248 6.1911263 10.4153362 14.8342469 9.1493394 11.2566244 10.8293138 8.0406941 1.5186862 5.2948045 8.2709143 9.2908506 11.4024135 0.1967329 6.3816485 7.0169520 10.2682353 10.8784506 5.8972138 5.5630940 5.3865971 10.6605527 12.0203392 2.1036655 13.9544234 4.8114813 7.4982692 12.8474321 12.9106427 13.0365180 7.7723119 10.6111940 11.0539764 10.6828990 11.7637783 5.4062271 8.2343198 12.2129719 10.5793970 2.2842476 10.0866572 9.2581441 0.1967329 3.2498852 9.6407525 10.6846130 10.0824694 9.2329466 15.1802342 10.4962672 9.9331749 7.7222939 4.4821771 15.0753388 10.7964534 12.5943808 11.9499897 9.6177859 9.4890945 8.3208944 10.2889387 -0.00346270 0.45479000 0.45479000 0.00152550 0.01488800 0.91299000 0.00194180 -0.00060118 -0.00060118 -0.49350000 0.00180300 0.46280000 1.30370000 0.47907000 0.00694350 3.24810000 -0.07401000 0.00000000 0.00000000 0.00346870 0.00138680 0.00416320 -0.47723000 -0.47723000 0.08565400 -0.00083160 -0.00083160 -0.00083160 -0.00041585 0.00064225 -0.00346270 -0.00719580 0.00152550 0.01167900 -0.48461000 0.00194180 0.00194180 -0.00060118 -0.00060118 0.00069327 0.00017132 0.00763920 -0.49350000 0.00249690 0.00249690 0.00249690 0.00249690 -0.49162000 -0.01409000 -0.50204000 -0.49527000 0.00000000 0.00000000 0.00000000 -0.00152430 0.00138680 0.00416320 -0.49761000 -0.47723000 -0.47723000 -0.00083160 0.01531700 -0.00083160 -0.00041585 0.00666530 -0.48586000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 9.3228320 14.0661981 5.6146245 10.2121880 2.9387751 10.5352309 0.5187365 0.7817374 8.7252272 9.3921452 NA 8.2024956 5.4913946 10.4772537 9.0817066 2.3666999 11.5448095 10.0446134 10.0659813 9.7789149 9.6546616 7.8954777 12.1969491 3.1509658 8.1156362 9.7242500 7.2023972 NA 10.2540878 2.1967644 12.5373185 12.3896052 8.6521003 9.7005987 8.7173916 9.5096559 5.5890893 1.8972017 NA 7.0201399 8.0885566 8.8876441 10.4384583 6.1156367 8.2719980 6.5187004 9.7475198 7.1509688 9.3026814 -0.8031412 11.4479595 2.3666999 4.1967723 9.7578127 6.1391113 1.1967959 10.0217316 10.2343199 6.5321626 1.1967959 13.5406180 1.8972017 10.3414312 NA 7.9399241 6.2411671 7.6562046 8.9449659 15.454395 6.495981 8.860331 11.919794 10.184037 10.689127 12.518349 12.309050 9.067908 11.175126 13.257933 10.152423 9.290851 8.660297 2.518711 7.320894 11.350483 11.6784463 5.9246938 9.1726210 8.9748502 8.3704503 10.8599708 6.8077980 8.6240859 11.4844853 5.1392894 0.7817374 6.1334115 7.2438699 11.7180053 10.4270936 8.0547541 8.5265693 11.9511386 5.9246938 9.4553389 10.4053122 10.9834510 10.9651641 10.7225384 9.2212200 1.7817374 9.4314466 8.5443277 4.1740548 10.8784506 5.7045677 10.7349619 10.6605527 7.2815814 13.9716372 10.3085607 10.1647197 12.5957838 10.8667652 9.5658251 2.1967644 TCGA-A8-A07F 65 0 NA 577 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 3 3 NA 3 2 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 5.006051e-07 1.668684e-07 11.3256148 6.7319354 8.0754353 11.0908573 -1.8567372 11.1654148 NA 10.6245153 11.9024845 10.4836270 9.6410724 8.1304846 8.3293349 8.6138793 7.4651484 8.9245801 10.1407527 10.1509485 7.7412728 0.7282253 9.8867926 9.1304843 9.3081274 11.3967725 10.1375738 10.7533225 5.4651484 10.2856466 -0.8567372 1.3131297 8.5568482 12.1446286 11.8330001 6.0319642 12.4279000 13.4730168 9.4969187 6.1544475 4.1205012 5.8226996 8.7579303 10.3816251 7.6370762 13.1844518 2.4651386 9.6872189 13.3814012 6.4146835 9.0429097 11.6252720 7.6250198 2.9505804 -1.8567372 13.4476470 9.3660153 0.9505431 8.9673836 12.0976894 4.6823767 10.3112657 10.9184192 10.2753988 10.8185160 10.9078847 9.4600676 2.5355305 12.7610322 10.3274760 5.3526738 7.8367075 5.2306834 11.6710639 14.5089619 10.0640125 12.2451140 11.5629173 9.6539845 0.7282253 3.9245845 6.9980883 9.4152668 11.4542591 -0.2717747 4.6189551 7.3404368 9.8160877 11.5400927 4.4470039 6.1432199 5.3623892 10.5755013 12.0080836 3.8156472 13.0220856 5.7870772 7.2595644 12.9129033 12.1221096 12.5050957 7.8677340 11.2384526 11.3338168 11.0471926 10.8702900 5.6026528 8.1190682 12.1718172 11.7937112 NA 10.2412526 9.6608898 1.4651386 3.9251069 10.1793940 11.3361297 10.2598893 9.5504882 14.3825952 10.0816974 11.1807674 7.7523994 0.9505431 15.4133880 9.6510151 14.2354201 11.5918530 10.5686986 9.0650614 9.5128177 10.9651219 -0.51714000 1.51440000 1.51440000 -0.51487000 -0.52233000 -0.00057549 -0.00507240 0.51836000 0.50455000 0.50913000 0.50913000 0.50913000 0.02621200 0.01990100 0.51574000 0.51574000 0.51574000 0.00970650 0.00000000 -0.52830000 -0.51806000 -0.50486000 0.01500700 0.01500700 0.01500700 -0.00168390 -0.00168390 -0.00168390 0.02916300 -0.50143000 -0.51714000 -0.49570000 -0.52233000 -0.00057549 -0.00057549 -0.00334540 -0.00334540 0.51836000 0.50455000 -0.02118700 0.52483000 0.52921000 0.50913000 0.52973000 0.52973000 0.52973000 0.52973000 0.01990100 0.01990100 0.51574000 0.51574000 0.00970650 0.00000000 0.00000000 -0.52830000 -0.51806000 -0.49966000 -0.52786000 0.01500700 0.01500700 0.01780200 -0.00168390 -0.00168390 0.01740000 0.01347100 -0.51302000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 8.8880543 13.4109215 10.0391743 9.6765502 2.5674724 10.8440936 -0.8567372 -1.8567372 8.9031085 8.1683602 NA 8.8219790 -1.8567372 9.5731501 8.7625232 2.7281817 6.7689293 9.6687412 9.3532829 9.5333893 9.7113333 8.5642333 10.3702346 2.3131588 9.7852721 9.4600676 2.7870772 0.1432628 10.3723397 4.2517418 12.1115272 11.4643029 7.7762159 10.2173618 8.5323138 9.1197846 4.0501098 1.3131297 0.4651909 4.6189551 9.0478552 9.1024980 9.6934863 2.5355305 8.3257264 5.3428925 10.4452881 6.9980883 9.4105923 -0.2717747 11.3738414 3.0501186 4.3330444 10.2276635 5.2257955 3.8156472 8.7281828 8.2517447 6.9080923 1.1431975 12.7764995 0.7282253 10.2066155 NA 7.6390751 4.3526738 8.7253625 8.5149972 12.426992 6.056109 9.213341 12.427900 9.367825 11.462893 13.184452 12.090949 9.597520 11.394407 13.749134 10.602652 9.415267 8.082799 1.143197 7.471895 12.026818 11.813213 7.485295 9.323751 9.129062 9.434391 11.541105 6.779845 4.483068 11.396772 4.292966 1.465139 4.728182 7.766261 12.855532 11.015895 7.645057 8.213341 13.875361 5.757930 10.275399 9.667272 11.428912 9.878777 11.349930 10.453833 4.884686 10.141102 8.337362 4.787077 11.540093 7.891413 10.566260 10.575501 8.380490 12.628295 9.375042 10.624515 13.156543 10.757240 10.416725 2.391135 TCGA-A8-A07G 65 0 NA 577 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 1 3 1 NA NA NA 1 4 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.733988e-07 1.668684e-07 11.62242521 6.84600682 7.15147630 10.98595526 0.04292445 9.52003579 -1.54203806 10.60773680 11.84236869 6.61280806 10.03258316 7.50238391 8.75948577 8.76746611 8.76177028 9.16621130 9.96776461 9.61470488 7.80006445 2.15843398 9.52542391 10.11038647 13.47575500 10.14755093 9.38946593 10.54744009 5.36488055 10.16189322 0.45796194 -1.54203806 8.42953312 12.51648879 12.65888826 8.57822738 13.66133765 12.35555152 9.20198249 5.27816693 0.04292445 7.17566631 8.13922799 8.83628458 8.67957686 12.70976790 0.04292445 11.02903118 13.22369014 7.69400400 9.46150748 11.03068989 9.25077995 5.63790001 NA 14.58445618 12.04414685 4.43526854 8.33450660 NA 4.36488055 10.61943649 10.56814662 9.62415282 11.60598946 10.30387171 9.83248578 4.23935221 11.53330165 9.65766198 5.17223547 8.52945203 0.45796194 11.09416110 15.32491839 8.19640295 11.04154260 11.88254963 9.84439115 2.77991105 3.62791029 9.32294957 10.87320323 12.45816573 NA 7.14449000 7.09823426 9.20029909 11.07958372 5.61785972 6.35885688 5.29088144 10.61659929 11.56062154 1.45801446 13.59273681 5.95783568 6.91331669 12.69160932 14.05537300 12.69669293 9.46221002 9.61786101 10.91537054 10.29253572 11.11083464 4.98155130 8.45939801 12.19734836 10.85886911 -0.54203806 10.91177471 8.83302921 1.91743176 2.46519089 10.29837422 9.21787775 9.33986826 9.36713274 15.34004753 10.45587481 10.26333048 7.81113639 4.13041200 15.82083242 8.88530255 13.13763467 11.49227277 9.73643914 9.30347962 8.60264802 11.02946262 -0.1206900 0.6905500 0.7124800 0.0000000 2.5410000 0.5180400 0.3680500 0.0212060 -0.0749360 0.0713910 0.0713910 0.1444400 0.1206400 -0.0696190 -0.0758780 0.1746500 0.1746500 -0.1352300 0.2243700 -0.4366900 0.0540910 -0.0431950 -0.3063900 0.3490900 0.3490900 -0.1247300 -0.1247300 -0.0989450 0.5392500 -0.1588600 -0.1206900 0.1140400 -0.4390800 0.2445100 -0.2446000 -0.1357400 0.3593700 0.0451410 -0.0749360 0.0469840 -0.1284900 -0.1284900 -0.5342900 -0.4094800 -0.4094800 -0.4094800 -0.4094800 -0.1392300 -0.1387100 -0.1453000 0.1190200 -0.1352300 0.1505400 0.1027800 0.0304510 -0.4233100 -0.0237030 -0.4371300 -0.3063900 0.3490900 -0.3879500 -0.1247300 -0.1247300 0.0144700 -0.0042929 -0.0912870 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 8.96280869 14.10797552 8.86844108 9.94984276 3.92526839 9.44951144 1.91743176 NA 8.05604209 8.05417938 NA 8.16450271 3.21288057 10.68168969 8.55996514 1.45801446 8.35280751 9.14273839 10.99131939 10.60995751 10.45107312 7.47479781 11.01856129 2.85029937 8.45516897 9.83248578 2.36488055 NA 10.81168785 2.54544950 12.60416051 12.31927044 8.75834216 10.39903722 8.53614035 9.15756219 4.18590618 2.36488055 0.04292445 1.45801446 8.60519465 10.03683408 10.16707349 4.01257761 8.03724878 5.64781528 10.12021299 6.34673356 10.07866774 -0.54203806 11.79700450 3.31597191 4.41218536 9.55765305 4.79230877 5.08734827 9.12332554 8.50511365 6.38872683 4.04295070 13.94790031 1.45801446 10.37050477 0.45796194 9.38872705 4.96578428 8.65643452 9.93776986 12.78343566 5.30348122 9.13394671 13.66133765 9.73991964 11.41907755 12.70976790 12.64619212 10.09629889 10.68259436 13.01299810 8.82212433 10.87320323 9.42953312 0.04292445 7.15147630 12.13052549 10.802840 6.858869 8.671094 8.933723 8.426656 9.067722 6.896782 5.788908 10.147551 6.811137 6.012578 5.534806 6.363917 12.933153 10.285729 8.802286 8.587273 12.913510 6.480357 9.624153 10.544789 11.536307 9.000054 10.177378 9.551407 NA 9.834359 8.341839 6.880055 11.079584 8.958832 9.623525 10.616599 7.610503 13.752072 10.048109 10.749448 13.216005 9.733532 9.225347 1.265317 TCGA-A8-A07I 69 0 NA 426 breast stage iiia t2 n2a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 1 3 1 NA 1 5 1 2 3 1 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 1.946798e-07 12.3574123 5.3422987 6.4769503 11.1571962 NA 10.2601265 NA 11.1513345 12.4423913 10.9114955 10.4544565 7.3847924 8.8397184 9.4205091 6.5052383 9.3413200 10.7743883 9.8801095 7.6293100 3.2781632 9.9748215 10.3728475 14.5379400 10.3742862 8.6066410 11.2883802 6.2196177 10.7981636 1.1406478 2.5191896 8.7685651 12.6204468 13.3348693 7.9531645 16.8205369 13.5356114 9.1530116 5.3265338 0.8187688 5.7960188 8.3809809 7.0036135 7.8102599 13.2950416 -0.1813130 9.9460879 13.3694852 3.4625890 9.6201639 10.9200576 6.9062015 9.3255418 -0.1813130 14.2321204 11.0819430 1.8187279 9.0936988 0.4037040 5.6891034 10.2371182 10.2019026 9.5869227 11.1055849 10.2776576 9.6309158 5.4769487 11.2455273 10.5665118 5.7494753 7.5836101 2.2781632 10.9570102 14.9234395 7.7198768 11.4849624 10.9703892 8.3005379 2.1406805 7.3344387 7.8685868 9.4625945 11.0388143 NA 6.5052383 6.8130924 9.9836453 11.3942776 5.8955547 6.6325198 5.3422987 9.9710233 11.9931960 4.2450012 13.7016202 3.9480214 7.4074530 11.8466444 13.3064528 13.0193305 7.2024422 10.2418544 10.7866851 10.1958513 11.9586094 5.0855266 7.9324805 11.6914133 12.3119684 -0.1813130 10.3632199 9.6937197 1.8187279 3.2137983 9.7524290 10.3378832 10.5848532 8.4999770 15.0182382 10.1395389 10.1133592 8.6798252 2.4037040 17.1097742 5.1762909 12.9471356 11.8428392 10.1702298 9.4990978 9.1190910 10.9324187 -0.7080100 1.3214000 0.6627200 0.0000000 0.0000000 -0.0018014 0.0027745 0.6582900 -0.0040162 -0.7004600 0.8558100 0.6719200 -0.7010900 0.0111210 0.0049969 0.0049969 3.6569000 0.0058309 -0.0041546 0.6229700 0.0083351 0.0228650 -0.6862400 3.6569000 1.9253000 -0.0087146 -0.0087146 -0.0087146 0.0258120 0.0137720 -0.7080100 -0.0257680 0.0000000 -0.0018014 -0.0018014 0.0027745 0.0027745 0.6582900 -0.0040162 -0.0040162 -0.7241100 -0.7103300 -0.7073800 0.0095883 0.0095883 0.0095883 0.0095883 0.0111210 -0.6988400 0.0049969 -0.7059400 -0.0041546 -0.0041546 -0.0041546 -0.7066600 0.0083351 0.0314360 0.0339720 -0.6862400 -0.6866100 0.0137720 -0.0087146 -0.0087146 0.0258120 0.0056919 -0.6916900 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 8.9441519 14.1575444 6.6891034 9.9008875 4.5466599 11.6383188 2.8187483 NA 7.4260685 8.4205094 2.9886665 8.7093827 4.0281890 10.3544998 9.0913682 0.8187688 8.2554497 9.4688926 9.8438779 8.8271671 9.5062715 8.1087570 10.6871751 2.8313098 8.8411061 9.6309158 2.2781632 NA 12.6684367 2.2781632 11.7650964 12.1909233 7.9811300 9.7361105 10.4733745 9.0642912 4.7729361 1.8187279 -0.1813130 3.7729308 7.5087360 9.5694453 9.8424927 1.9886665 7.3064582 5.3265338 9.3471926 5.6389166 9.1905151 NA 11.2588289 3.5736290 3.4625890 8.3935591 5.6520074 6.9886631 8.6389173 8.5364147 8.3005379 -0.1813130 13.0050848 1.6261120 10.9386522 NA 7.7758407 3.6767187 8.4279170 7.8928797 14.1433718 6.7196051 8.1959489 16.8205369 10.5951755 10.6654041 13.2950416 11.3381289 10.4785916 10.8386765 13.9576901 10.3828879 9.4625945 10.6867892 0.8187688 8.5398377 11.5875430 11.5945544 5.0855266 8.1630342 9.2046007 8.6066410 10.5272231 6.9008873 8.0523583 10.3742862 5.6767187 NA 5.9684848 8.5484952 12.7052924 10.1762904 9.0451505 8.7902820 11.3198291 8.1828730 9.5869227 10.4796257 11.5700732 10.3847924 10.9668972 9.0878651 0.8187688 8.7071013 7.2967391 7.7316279 11.3942776 7.8928797 10.6405124 9.9710233 7.5534481 12.3998212 10.1490951 9.1991995 12.2731662 11.2402773 10.1350200 2.9886665 TCGA-A8-A07J 35 0 NA 365 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 8 2 2 NA NA NA 1 3 3 3 NA NA 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 2.781139e-07 11.3013529 9.2461361 5.9672770 11.4070466 2.9672793 9.5828523 NA 10.2510461 11.5413694 9.7586313 9.3984671 7.9269382 9.0000518 9.2785577 6.2976665 9.0843851 9.8812221 9.5442613 7.5871729 4.4344014 10.1704088 9.7323435 12.8960129 10.7288281 9.4411018 10.4577148 5.4797253 11.0904853 -0.1201374 -1.1202942 9.7927033 12.3310251 12.9146129 8.2678312 12.9369596 12.9728188 10.2833587 7.2017417 4.8798136 6.9725709 8.1790218 10.4491950 8.1721354 12.1767302 0.8797842 11.2756158 13.5102518 7.1229884 9.3732891 10.2624380 9.6212810 9.4591299 NA 13.9681248 10.8976663 2.4647728 8.3776656 NA 4.4344014 9.9955080 10.0910939 9.9337399 11.1657941 9.8201276 9.7198050 1.6871503 11.1553566 9.7897071 7.0941326 9.3382205 -1.1202942 8.9350964 14.7295367 7.6606163 11.8748744 11.3759187 8.0396851 2.3392514 5.2196642 8.3756690 9.8812221 11.2138078 -0.1201374 6.9987551 7.1419089 9.5009500 11.5548889 5.7986779 7.0396857 6.1559374 10.5940595 11.3364251 -0.1201374 13.2542422 6.7746316 6.9725709 11.5324349 12.9765291 12.7715028 8.6128294 11.2351651 11.0333660 10.5456340 11.1666605 5.3555484 8.5940596 12.5554403 10.7647476 -1.1202942 10.6284261 8.6628122 1.4647728 3.5248285 9.4014144 10.7662726 10.0714901 8.9831019 14.5272724 9.7776594 9.7986772 8.2039944 3.2017436 13.5809580 6.2721315 12.9126346 11.9781751 9.9111705 9.7331235 8.2764190 10.0813928 0.00833510 0.00833510 0.00833510 -0.66513000 1.10440000 0.00360760 0.00013863 1.87930000 -0.67435000 0.00299830 0.00299830 -0.00388300 -0.00144600 -0.00144600 -0.00152430 -0.00152430 -0.00152430 0.00000000 0.00000000 -0.01503900 0.01000600 0.01614600 0.01167900 0.01167900 0.01167900 0.00069327 0.00069327 -0.00014023 0.01852300 0.00833510 0.00833510 -0.01216200 -0.66513000 0.00360760 -0.00541130 -0.00516750 -0.00516750 -0.65901000 -0.67435000 -0.67594000 -0.00203970 0.00263570 0.00299830 0.00724840 0.00724840 0.00724840 0.01852300 -0.00144600 0.02637300 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 -0.00346270 0.01000600 0.00624810 -0.65817000 0.01167900 0.01167900 0.00388540 0.00069327 -0.00014023 0.01852300 -0.00166290 -0.64415000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3826459 13.6651643 5.2017436 10.2023056 2.4183519 9.5415921 1.4647728 1.4647728 8.2329610 8.1253665 -1.1202942 8.1173584 4.8340083 10.3201641 8.8193932 0.8797842 9.5949180 8.6951973 8.9063375 10.0428346 9.8079992 7.3060790 11.2434012 4.5802540 8.1372017 9.7198050 4.1277406 NA 10.9804763 3.2017436 12.8725753 12.2960837 7.8628078 9.8692084 9.8296406 8.9499349 3.5802540 2.3392514 -1.1202942 4.8340083 8.6145236 9.2667542 10.1342521 5.9672770 7.5388462 5.4033768 10.3243113 5.9132365 9.3382205 NA 11.2274353 2.7867009 3.3392514 9.6563045 6.0847765 3.0497353 9.3994501 9.1170238 5.5522387 3.3392514 13.3505364 0.8797842 10.1194125 -0.1201374 8.3060786 5.4797253 7.8340102 8.7700781 12.619810 4.127741 8.409245 12.936960 10.517091 10.162902 12.176730 12.291854 9.302930 11.052866 12.890517 8.341293 9.881222 8.726871 NA 7.322757 10.983102 11.144257 8.274277 9.055987 8.590620 7.882629 10.220560 7.753258 7.029561 10.728828 7.103815 3.834013 4.272128 5.597078 10.780303 10.179022 7.759398 8.153610 11.874344 6.079487 9.933740 10.528621 10.209050 9.779171 10.749793 9.526373 NA 9.611727 6.600913 4.879814 11.554889 7.715865 9.969264 10.594059 7.545150 13.479378 10.230201 10.585446 12.761215 9.928301 9.930343 2.786701 TCGA-A8-A07L 58 0 NA 518 breast stage iiia t3 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA NA NA 1 1 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.835552e-06 4.727937e-07 12.5651771 5.6741894 7.1863391 11.7639279 NA 10.3641631 0.7769462 10.1739810 11.2514654 7.8979634 9.5868771 6.8938124 9.2437383 10.3649131 7.1060719 9.3300015 9.5291615 9.4301516 6.4773875 1.4550181 9.3916580 9.4500806 13.5011210 10.4461877 8.8103711 10.5713640 3.8125701 10.9558595 -0.5449819 NA 8.7825727 11.3999152 12.9386470 8.1829405 12.7132181 11.9913888 9.7461908 4.0697279 -1.5449819 7.7334696 9.1666871 7.1415207 8.5318356 13.0584726 4.5843011 9.1956441 14.0058270 4.8812829 9.6309251 11.6862413 9.3028605 6.5894459 1.2623730 13.1487777 8.0229764 2.3619087 8.5062290 0.0399806 4.5424809 9.7264832 10.0352787 9.8164157 10.0952650 9.7386873 9.1990129 1.2623730 11.6205553 10.4110332 4.5635426 6.6981935 0.0399806 10.4189999 14.2709037 7.6208818 11.4376573 11.3883420 8.3573954 0.0399806 6.2165713 6.9980522 9.0277203 10.0993270 -1.5449819 6.0324491 7.3130009 10.2839499 10.6333737 4.6249431 4.1554578 4.6448427 9.8037483 11.8789239 6.9980522 13.7175922 5.0096069 7.5609289 10.4022918 13.4173739 12.7248043 8.9195659 10.5500874 11.2655917 10.2182325 10.7238545 4.7029456 8.7859369 11.1278874 7.6022252 NA 10.2392460 9.4994142 -0.5449819 2.3619087 8.9638053 11.3901852 9.5635447 9.4725245 14.8494661 11.1419583 9.8278852 7.9628145 3.8125701 16.0216465 6.6981935 11.1163529 10.1897297 10.3505954 9.1132317 7.7836950 11.0004673 -0.7853000 1.1403000 -0.7530500 0.0602290 0.5968800 -0.0182160 0.0000000 -0.0055375 -0.8316300 3.6569000 0.7640800 2.4395000 0.0471260 0.7970400 -0.0194520 0.0539480 0.0539480 1.5564000 0.0353830 -0.8054200 -0.0579240 -0.7421200 -0.4526500 -0.3233300 0.7171600 -0.7362600 0.0607940 0.0607940 0.8486900 -0.7490700 -0.7853000 -0.7510100 0.0447150 0.7715600 0.6275200 -0.0105080 -0.0105080 -0.0058140 -0.8316300 0.0233300 0.0029133 0.0343950 0.7833100 -0.7275600 -0.7275600 0.0221640 0.5044600 0.0273570 -0.7816900 -0.0189020 -0.7769400 0.0221640 0.0420130 0.0921700 -0.7862400 -0.7597800 -0.7832800 -0.7578000 -0.4526500 -0.3233300 0.7469600 -0.7591700 0.0607940 -0.7631200 0.7786800 0.1376100 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 0.000 0.000 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 0.000 0.000 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 7.8408824 13.2290350 5.4437061 9.4980474 2.0399806 11.1722681 1.0399806 NA 8.5477772 7.5021444 NA 8.2720036 2.1554578 10.8540310 9.4099435 1.9144497 6.5264820 9.2559201 8.0952651 10.7513628 9.8009465 7.7053186 10.5700637 2.0399806 8.1221317 9.1990129 3.4994122 NA 10.7864970 0.7769462 11.7752566 12.6589798 7.5318360 9.2510598 7.8059592 9.8257076 3.4994122 0.0399806 -1.5449819 8.5596188 7.9647948 9.4704352 10.8691768 2.6249431 7.8795643 7.2526815 10.0158305 7.5184155 10.1939567 NA 9.4236870 2.6249431 3.4550181 9.7563448 5.3408400 -1.5449819 8.7159397 7.8896481 4.4773859 1.4550181 13.9262825 NA 10.5543679 NA 8.2575363 5.1692676 8.1897297 7.7171150 14.469338 6.415022 8.422246 12.713218 9.232612 9.884427 13.058473 10.961080 9.161516 11.672069 12.478081 10.405576 9.027720 7.683839 4.542481 7.972690 12.619456 11.737240 5.749642 7.954866 9.752510 4.477386 10.979488 5.499415 10.086652 10.446188 6.294224 -1.544982 5.024874 8.703588 11.284148 10.370900 8.191422 10.452553 11.599838 3.584301 9.816416 9.809821 12.383261 9.717115 11.266997 8.710049 NA 8.868278 6.385757 3.262373 10.633374 7.172697 10.845458 9.803748 7.306769 13.110383 9.869177 9.572663 11.504188 9.991267 10.354377 NA TCGA-A8-A07O 51 0 NA 304 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 8.621532e-07 1.668684e-07 12.4649054 0.2584586 6.0849742 10.5935363 -1.7417826 9.8096527 NA 8.9709523 11.7662198 8.5576333 9.8685272 8.8072470 8.6825916 10.0459196 7.3137075 8.2485291 9.4611612 10.6956570 8.3164169 4.2357041 10.1490694 12.8773268 12.5932571 10.2804461 10.3126902 10.3429014 6.1772880 11.0875393 7.3432337 5.5622058 7.5780971 10.8859590 12.3372431 8.9931348 11.4915954 11.9888953 10.0609415 6.0266098 4.9998918 8.1441213 8.5169914 7.4775940 5.2696541 7.4482493 NA 10.0203919 9.4781987 7.2038687 9.1469250 10.8804770 5.5893410 8.2668540 1.2583983 13.2105749 7.7402247 2.1653010 8.6593045 -1.7417826 4.0913190 8.9709523 10.3505216 8.5193445 9.8555466 10.4454679 9.7147796 10.7339052 11.0581115 10.1043072 4.8583391 6.3669499 0.8434211 9.0833839 15.2639072 8.6946995 10.2545455 11.4092831 9.6334646 2.0657791 0.2584586 6.9829388 9.7716593 10.8325456 0.2584586 3.0133193 7.0199765 9.5146338 10.8795613 5.1164063 7.3590871 4.2807930 10.0377342 11.9410906 1.5803385 13.9010410 2.7178464 6.8053195 11.6099166 12.3802015 12.5463539 5.8053208 10.5642019 11.1492594 10.8447841 11.5945132 4.4081752 8.7044747 12.7323845 9.5814799 0.5803385 9.9605979 11.0845764 1.8433809 2.7191615 10.0389649 8.8216216 9.6027211 9.0738085 14.9042384 11.6382096 11.5444053 6.3928515 -0.7415414 12.5285014 5.9237601 11.6702009 11.0879497 9.8864149 8.7432480 7.6378037 10.8702154 1.6417000 2.1742000 1.1018000 -0.0036011 0.5647200 0.0000000 0.5088200 0.0253900 -0.0018014 -0.6044800 1.1009000 3.5071000 0.0056815 0.0041632 0.0062481 0.0062481 0.6142600 0.0167050 -0.0065050 -0.5915600 -0.5797700 0.0287630 -0.5295100 0.6255100 0.0308730 -0.5385500 1.1694000 -0.5440100 0.0063871 0.0345360 0.5613400 -0.0160170 0.0070826 -0.5743700 -0.0060904 -0.5886300 -1.0266000 0.0253900 -0.0018014 0.0030522 0.6540600 0.0139110 -0.6032200 -0.0259010 -0.0230180 0.0120970 0.0397610 0.0041632 0.0225850 0.0062481 -0.0037395 0.0079175 -0.0065050 0.0073609 -0.5850000 -0.5462300 0.0126550 0.0204830 -0.5634600 0.0431570 -0.0256200 -0.5057700 -0.5440100 0.0047190 -0.0231550 0.0317180 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.562 0.562 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 -0.587 2.088 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.562 0.562 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 -0.587 2.088 0.000 0.000 0.000 7.0944757 12.4482497 4.1410649 8.7137525 2.9022859 10.4648291 -0.7415414 NA 9.0099691 9.3096341 -0.1566593 8.8768475 2.2584285 11.2844298 8.6214647 2.9022859 3.3028162 10.9660000 5.5622058 10.0166484 8.9015958 6.0332115 10.9527830 1.7178683 9.9040836 9.7147796 1.4283568 NA 10.9181981 8.1007753 12.7664675 12.0936861 7.1070486 9.1585372 8.0512155 9.0149815 1.8433809 2.3458789 -1.7417826 0.5803385 7.7975837 8.6442875 6.2918485 2.1653010 7.5043344 7.5915807 9.7351713 4.9308509 10.7525307 2.9588612 11.8353818 3.4678794 5.0657791 9.9162303 8.8251929 3.6507416 8.1683181 8.3643339 5.3979775 3.5803505 13.4498700 -0.1566593 10.5806350 NA 10.6132255 3.4678794 8.2499468 6.4727444 10.510011 10.689662 8.097629 11.491595 8.604939 11.433663 7.448249 11.499813 9.455027 10.817563 13.354729 13.929109 9.771659 7.482427 6.052842 8.404357 11.594932 10.7617540 6.6291132 9.4507180 9.1015610 9.8827636 10.4230430 5.7341595 6.1039151 10.2804461 10.3747691 0.8434211 6.2752343 10.6228170 12.7405398 11.4330388 7.9215208 9.4401985 9.2548987 5.8508819 8.5193445 9.7607597 12.1539058 11.9543059 11.1952471 10.1924845 NA 9.1118360 6.2918485 4.4482468 10.8795613 5.3458895 11.1309808 10.0377342 8.8734847 15.0021857 10.8339644 10.5952107 13.5299976 10.5158130 9.4926438 -0.7415414 TCGA-A8-A07P 68 0 NA 334 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 3 2 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 2.781139e-07 11.36931020 4.97473120 5.99831738 12.03072720 -1.53324238 8.90780431 -1.53324238 9.46199545 11.10785784 10.12693092 9.53705606 7.08898641 9.30613895 9.80399949 8.99538926 8.93962593 9.44349912 9.11079126 6.54375105 3.55439239 9.40504443 9.53302422 13.53436943 11.47851179 9.57153385 10.12693092 4.46693377 10.05095805 0.46696638 0.78885273 7.52492717 9.79167816 13.27227591 8.95577950 14.86352314 12.97689560 7.84414584 5.32491499 3.32491139 6.69575446 7.66660749 8.04813590 6.94266815 12.70690647 0.78885273 9.46834321 13.08784218 2.78887360 9.11393460 10.38281443 8.39619332 8.84631341 -0.53303362 14.04998933 11.44260398 0.05185930 7.73137742 0.05185930 3.82448275 9.81344885 10.90987854 11.00682087 10.44743166 10.36402420 9.56101275 1.46691419 11.18503981 9.49276671 5.83325697 7.63184203 4.05189409 10.86460968 14.63144923 7.76252024 11.99159922 10.65212022 8.39323127 0.78885273 6.29982527 6.70533933 9.26864352 10.69274503 -0.53303362 7.25156951 7.09993056 9.43560193 11.22744712 9.99929102 5.56496647 4.95878701 10.18289710 11.37457689 4.29982344 14.20492175 5.69575446 6.87632662 11.23532618 13.05424380 12.53125683 8.30298522 11.25931869 11.06382365 9.23346390 10.29705405 3.92636954 8.95878817 11.77513188 11.40908300 NA 9.83489574 9.04813563 -0.53303362 0.06626144 9.42476256 10.00463889 9.42548784 8.73723044 14.97692652 10.11843526 11.25422548 7.19485533 2.63686819 16.94587056 9.31399245 11.34153228 10.37532772 9.77242692 8.92020575 8.31242512 10.31269557 0.0019418 -0.0178410 0.0028264 -0.0248620 -0.0988140 -0.0205490 0.0132130 -0.0056156 -0.8181900 0.8262700 0.7101900 0.8110300 0.0054139 0.0054139 0.0033299 0.0033299 0.0033299 -0.0205490 0.6154400 -0.8114500 0.0052749 0.1015400 0.8079200 2.1875000 3.4543000 -0.0926100 -0.0926100 -0.0926100 0.9356900 -0.8351000 0.0019418 -0.3058000 -0.0360880 -0.0651790 -0.0291950 0.0132130 0.0132130 -0.0056156 -0.8181900 -0.0012473 -0.0023553 0.0023581 -0.8036800 -0.0123000 -0.0123000 -0.7960300 -0.0466390 0.0054139 0.0054139 0.0033299 -0.8052600 -0.0205490 0.6154400 0.6154400 -0.8003600 0.0052749 0.2665500 -0.8222200 0.8079200 0.7235700 -0.8370400 -0.2098900 -0.0926100 -0.8111200 -0.0022168 0.0866660 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 8.0798037 12.4230389 3.8244827 9.2243252 1.0519289 10.7933646 1.2742915 NA 8.5235729 8.2532046 -1.5332424 7.5943104 0.7888527 10.7304977 8.5477525 4.0518941 6.3372990 9.3472839 10.2990340 11.6533589 9.3952833 7.2450126 9.8710122 3.2218152 9.4767636 9.5610127 -1.5332424 1.7888527 11.8253116 2.9263600 12.3251104 11.7041450 7.9181465 11.1630332 8.5276310 9.9446933 6.9627896 0.4669664 0.0518593 4.3249186 9.4356019 9.3318951 10.6632299 3.4669403 6.1483139 7.3311212 10.1130437 7.1982545 10.4962223 NA 10.2970540 4.6763859 5.5543985 9.8727201 6.9408844 1.4669142 9.2050274 8.1035595 11.8314802 NA 13.3804790 0.7888527 10.0579898 NA 7.9667811 3.8244827 8.1863238 9.4527770 13.892467 5.724323 8.777548 14.863523 8.919176 10.752048 12.706906 12.104466 8.767288 10.815387 13.098283 10.512354 9.268644 9.187179 -1.533242 8.602644 11.207559 10.6797355 6.7978521 8.7695741 9.1188837 8.7372304 10.1402220 6.3798237 5.4781629 11.4785118 6.6166826 3.1673740 4.6957545 7.0703013 9.7809518 9.9592890 8.8277822 8.7511808 13.3193183 4.8244878 11.0068209 10.5410766 10.8354415 8.7569539 10.6496398 9.5656252 0.0518593 7.8446010 6.7509495 2.5543924 11.2274471 6.8112308 9.7820846 10.1828971 7.2713893 13.5510376 10.0085157 10.4046767 12.3714756 9.5003581 9.3029854 2.5543924 TCGA-A8-A07R 80 0 NA 273 breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 4 4 0 0 0 0 0 0 7.759379e-06 1.974609e-06 13.0241237 2.6559242 7.6408219 12.0011758 -1.7364848 9.6359325 NA 9.5628196 11.6670231 8.1765008 9.9761386 7.7852118 10.1965645 10.1663636 7.6451548 9.0201680 8.7822647 10.2408915 9.0416887 1.0709388 9.1293448 11.2978947 12.5893387 10.5824368 10.1324342 10.7709107 2.6559242 11.2961636 5.5020155 0.2636354 7.4972315 11.4139936 12.9222878 7.9483602 12.5226192 11.8399778 8.8783213 3.4335337 1.0709388 7.9744180 8.0933341 9.8653824 5.8410397 4.4924301 1.0709388 11.8679332 10.1854526 8.6730027 8.8993297 11.4689467 8.9761385 4.5115376 -1.7364848 13.3086933 6.8560682 4.9501138 9.7896217 1.7230342 4.7871712 9.5645361 10.3543856 9.5133176 10.7537103 9.6304801 9.8076101 1.5855395 11.3961113 10.6051304 4.7554645 7.3188943 1.4335471 7.1854523 15.5482460 7.0359263 10.8172409 12.4274971 9.8182004 2.5855395 3.0184917 8.2859792 10.4095438 9.4453851 NA 1.4335471 6.9146638 11.1557749 9.9417716 4.8182012 5.5397358 4.7554645 7.5651082 12.1753781 1.7230342 13.6977837 5.3510735 7.2692361 10.6438021 11.6772395 13.0324679 7.6473159 10.5452519 10.5570832 9.6704916 11.9874858 4.3721372 7.9146632 13.5602052 8.3890251 NA 11.0996620 10.1102772 2.0709732 2.7269620 9.7055183 11.3160098 10.9636178 9.1980396 15.1936559 10.9253897 10.3590086 4.7393459 4.0449711 12.6303436 5.0050766 12.7158528 10.3025306 9.7235555 8.8551338 7.5877925 10.8708355 -0.134910 1.403200 1.013300 -0.088374 1.796800 1.017000 -0.123170 2.535000 0.459220 -0.051046 0.995710 1.342200 2.246900 -0.174800 1.265000 0.766380 0.766380 0.539600 0.822200 1.420200 1.375000 2.146800 -0.175250 0.447480 0.447480 -0.206720 0.905330 0.691850 0.212230 -0.139360 -0.134910 0.379730 -0.078949 -0.108280 -0.750280 0.278520 -0.130050 0.606840 0.459220 -0.775750 -0.132120 0.449520 0.000000 0.957950 1.087600 -0.202240 -0.127840 -0.138970 -0.112340 -0.125900 0.250580 0.318830 0.822200 -0.160520 -0.139490 -0.112470 -0.143610 -0.091816 -0.175250 0.447480 -0.753310 -0.206720 0.691850 -0.073088 -0.800610 0.568280 0.144 -0.139 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 -0.142 -0.142 0.000 0.874 0.364 -0.128 0.354 0.144 -0.139 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 -0.142 -0.142 0.000 0.874 0.364 -0.128 0.354 6.4184295 13.0300888 3.5855395 7.7534595 2.5145768 9.9083692 NA 7.3188943 9.5115392 8.0251628 2.3510629 8.0980826 3.3928944 10.4534362 9.1231463 5.3080040 2.9074676 10.7832478 4.4335337 9.7812810 8.0136487 7.5719506 12.2592904 1.5855395 7.9588398 9.8076101 7.0869790 NA 10.9527360 -0.7364848 12.4727603 12.2107919 7.2970346 10.1591869 12.6925606 11.2618494 5.0050766 -0.7364848 -1.7364848 7.5536308 8.4509638 8.7158529 8.5639642 6.1584299 6.6496902 6.9002365 10.2537156 5.7065554 11.1305042 4.7714050 11.6602164 3.0709732 3.8181961 9.3936286 6.3412813 6.4285193 8.8296657 6.4972307 7.6386509 4.5115376 13.4230494 2.7871817 11.2522963 1.0709388 9.9696759 6.3457601 8.4184299 6.8143582 9.7085851 9.5934079 8.1385928 12.5226192 10.4478671 11.9398993 4.4924301 12.8053737 9.8934235 10.8716354 13.1098365 11.5054458 10.4095438 8.6483953 0.8485578 8.6473159 11.2999569 10.7273914 4.5855395 8.7013636 9.5501694 9.4755000 9.8389711 4.6898750 4.7714050 10.5824368 10.3263324 4.8635222 7.7271363 9.5011204 12.2705513 9.4497258 8.1043896 9.6719414 9.1408957 7.5020163 9.5133176 9.9110700 10.5064880 10.3090299 10.7815270 9.7250910 -0.7364848 9.1720041 5.2408905 7.6793534 9.9417716 5.3825531 10.0229880 7.5651082 8.3866984 13.5355123 10.7778325 11.1561544 13.6308216 10.5162770 9.3986796 1.7230342 TCGA-A8-A07S 73 0 NA 243 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA mixed histology (please specify) yes NA NA NA 56.63.0 5 5 2 NA 2 1 1 4 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.832981050 4.202300170 6.409625143 11.001199164 -1.579059544 10.451607695 0.742868551 9.805724367 12.143854787 10.244307815 9.771879803 7.578287391 8.998369284 8.062992149 8.207210084 9.771327364 10.799235393 9.451607798 6.420940456 0.005902957 10.231110514 10.484335638 13.268780914 10.659046683 9.705186379 11.578761148 3.278921451 10.382751972 0.005902957 0.005902957 7.124844030 11.118776944 12.603567700 6.121380174 12.819417057 12.672422977 9.756889188 6.432167712 3.175827958 6.851393008 8.138616879 10.886761988 6.529464913 13.396878070 1.420940456 10.992456248 14.278314156 8.819684148 9.707838973 10.575442245 8.862847161 8.341293312 0.005902957 13.839835114 11.493240672 2.420940456 7.195727516 NA 3.590865458 9.627954959 10.409980199 9.869573178 10.896420658 10.074233535 9.785075275 5.443308269 11.446426216 9.776291717 6.920786343 9.122246918 2.121380174 11.256004066 15.030148165 8.786410132 11.967473341 11.556810129 8.963972276 0.420940456 1.228295378 8.274250012 8.356105506 11.430594253 NA 6.148860911 6.880372075 10.987470381 11.329145521 10.961310772 4.912793552 4.960099267 9.980317689 11.843662395 2.121380174 13.536512608 7.339803693 7.437748744 11.778767462 11.979600430 13.021782675 8.605815799 10.439488502 10.806263713 10.447996403 11.428318294 5.035650300 8.535984106 11.692257660 12.825350378 -1.579059544 10.126140963 8.738353070 1.880372075 2.518560317 10.408204574 10.923275111 10.028733236 8.861809624 14.926566062 10.257779934 9.699390088 8.856610717 3.005902957 16.599629726 7.890582273 12.140864081 10.267997919 10.400008434 9.400365865 8.318785912 11.235645157 0.8641400 1.3099000 1.4082000 0.0063871 0.0063871 0.0143650 0.0093098 -0.0100940 -0.8636100 -0.8397800 -0.0091286 0.0068044 0.0037355 -0.0020233 0.0000000 0.0000000 0.0000000 0.0074601 -0.0029091 0.0054477 0.0042387 -0.0146560 -0.0282200 -0.0282200 -0.0252090 -0.0440090 -0.0440090 -0.0440090 -0.0110600 -0.0129510 -0.0041429 -0.0036011 0.0063871 0.0135770 0.0116570 0.0093098 0.0093098 -0.0100940 -0.8240700 -0.8515400 0.0048619 0.0013965 -0.8397800 -0.0011087 -0.0011087 -0.0011087 -0.0011087 0.0136320 0.0120970 0.0000000 0.0000000 -0.0016629 -0.0029091 -0.0029091 0.0069435 0.0042387 0.0081959 -0.8290300 -0.0282200 -0.0282200 0.0113810 -0.0440090 -0.0440090 -0.0110600 -0.0045695 -0.0268180 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.679 -0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.679 -0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 7.6712389 13.1590856 3.5908655 10.5524760 3.1029436 10.7190031 -0.5790595 NA 8.6795065 7.5136976 NA 6.5915164 NA 10.3561056 9.0719921 0.4209405 4.9127936 8.6352596 9.2843524 9.2936153 9.9360490 8.0096551 10.9659050 3.4653346 9.8046449 9.7850753 1.0059030 -1.5790595 10.3093033 1.5908655 12.7300616 12.3177460 7.2632908 9.5340316 8.7773924 9.2617184 3.1213802 1.0059030 -1.5790595 3.6303938 8.5946176 10.2125105 9.4293693 2.3278311 7.9840413 5.5908655 10.3104445 10.0434500 9.7646815 NA 12.3397107 1.4209405 5.2153563 9.5026636 5.6413668 -0.5790595 9.5732255 7.6033348 4.4870296 1.8803721 13.7060538 0.7428686 10.4950820 NA 9.5508676 4.9127936 7.7109593 8.7729839 13.116512 5.339804 8.533380 12.819417 10.177914 11.326516 13.396878 13.074178 9.218602 10.885486 13.004317 9.597114 8.356106 10.712687 2.327831 7.064797 11.598983 10.9685582 8.9474397 8.8196841 9.0245668 9.2768602 10.0311211 5.8132579 7.4349609 10.6590467 4.0059030 NA 7.8638840 7.0918447 9.9400854 8.9277439 9.1863923 8.8132579 11.8711208 3.2282954 9.8695732 10.1916045 10.0584711 9.4356586 10.5952421 9.3693077 NA 9.4312868 7.1310235 2.8132579 11.3291455 11.3131039 10.6062465 9.9803177 7.4735085 13.9227156 10.3623550 10.4802850 13.4516939 9.6753788 9.4646515 0.7428686 TCGA-A8-A07U 66 0 NA 760 breast stage iiia t2 n2a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 3.893595e-07 2.224912e-07 12.7807635 7.6493474 5.5726199 13.2428462 NA 9.7947973 NA 9.4418457 11.5390844 8.3180483 10.1611155 7.9257313 8.9504334 10.6858820 6.8173546 9.2218019 8.5771607 10.5236856 8.2777165 7.5876965 9.6435878 11.7374860 14.1434338 10.7032893 9.1736586 10.7999845 8.5558545 10.4803200 -1.3222888 0.2627939 9.0776155 10.5500937 12.0640703 6.7810908 12.6606190 11.7325774 9.8866475 6.7810908 4.2013673 9.6629339 8.5217245 8.1310745 7.4657060 7.3747709 NA 12.4665219 10.8808457 8.7371479 9.1040682 10.1998946 9.0733377 8.0506687 -1.3222888 15.9201707 10.7259499 1.2627939 9.0342556 NA 7.3537608 9.7098493 11.2700270 9.6622221 9.8218245 9.2514507 10.1816293 2.6778014 11.6721570 11.9346020 5.3643028 7.7029428 2.5846980 6.7276523 14.9667237 7.9316511 11.1459185 10.6629339 11.2615915 2.3782342 NA 7.6261712 9.5764050 9.9357806 NA 2.8477364 7.7758354 10.9174021 10.8067645 5.1696565 7.9929531 5.7546203 9.6579431 11.6339982 3.0701145 13.6178877 3.4851563 7.3537608 11.1066871 12.2534610 12.6701224 6.3502285 9.6435878 11.0898441 10.2666260 11.5458544 4.9815833 7.6319999 12.1030195 7.2998555 -0.3221084 10.7807635 9.5083187 4.3782411 4.0036922 10.0856024 9.9304690 10.0154255 9.2998555 14.8873712 10.5642623 10.1841112 6.7221982 -1.3222888 13.7483439 8.1040682 12.6279038 11.9812990 10.1560677 9.6070619 8.1331309 11.5014694 -0.045600 1.070800 0.268480 -0.043296 0.338240 -0.086528 0.321450 0.192570 -0.035686 -0.066217 -0.066217 0.894120 1.353900 -0.062382 0.031613 0.031613 0.031613 0.710250 -0.042618 -0.056674 -0.038249 0.128520 -0.063207 -0.063207 -0.063207 -0.081438 1.063900 1.496800 0.123620 -0.045600 -0.045600 -0.243720 -0.043296 -0.057889 -0.086528 -0.157970 -0.157970 0.192570 0.192570 -0.059402 0.147750 0.139940 -0.080369 0.334200 0.334200 -0.046277 -0.197200 -0.062382 -0.061386 -0.248090 0.031613 0.726640 0.079002 0.118470 -0.050336 -0.038249 -0.254640 0.197360 -0.063207 -0.063207 -0.052767 -0.094076 -0.078510 0.123620 0.150280 0.460630 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.120 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.120 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 9.7459101 12.2706110 3.2627639 9.0154254 5.8367674 10.3847312 5.1535378 7.2739932 8.8811516 9.0364547 -1.3222888 7.6766757 5.4722181 10.8395654 9.1954729 2.6778014 9.3440275 9.0131940 7.6946121 8.4867679 9.3747102 6.9724238 11.1024948 3.4326922 8.8969720 10.1816293 3.4326922 NA 10.6159129 1.6778014 12.3224485 12.5250567 8.5558545 9.6312726 11.5140512 11.1870837 6.0786824 2.3782342 0.2627939 -1.3222888 8.4360269 9.8608187 6.7599521 5.0176547 8.1696364 5.9539287 9.8527292 3.9632059 9.4217964 1.8477164 10.6309088 3.8477264 4.3216612 9.5748926 5.7112278 9.2814300 10.0031090 9.7180932 10.8796212 6.9492664 13.0437842 -1.3222888 11.7079534 NA 10.1382595 5.4722181 7.8799275 7.6693252 11.492524 10.081881 8.215022 12.660619 9.934602 10.694960 7.374771 9.647190 8.945761 11.429138 14.028363 11.467337 9.576405 7.799337 2.925734 7.281430 11.417373 11.0081603 5.7330858 8.4293477 9.5154316 8.9781562 9.0746866 8.7745186 7.5106938 10.7032893 10.2674547 0.2627939 8.6188513 9.9922283 11.9025590 11.1152956 7.8460996 8.1555620 10.1072103 10.6392532 9.6622221 10.2842088 11.2450467 9.7646033 10.8990886 9.1656437 NA 9.7980674 7.3431395 11.0056369 10.8067645 6.1207480 9.9867114 9.6579431 7.9678222 13.1725342 10.2256621 10.5846942 12.8149548 10.4360268 8.7758358 6.2851340 TCGA-A8-A07W 76 0 NA 304 breast stage iv t2 nx m1 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 3 1 NA 1 4 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.838585e-06 6.244252e-07 13.27959758 3.63153505 7.37956032 11.48392911 NA 9.76293492 0.34619103 10.11432173 11.87116877 8.27687488 10.24888938 7.93297710 9.07915274 9.86577363 7.35736462 8.34331676 9.41424401 10.12421452 6.41759939 4.27687627 9.79683328 8.69375874 14.77916859 11.52262228 8.92073097 11.23392921 4.96084529 11.26982144 -0.06884647 0.66802833 8.67705433 11.27261876 12.45237320 7.42562211 12.63630032 12.93906160 9.15026848 4.98999274 2.66807373 5.20411724 9.04310495 6.75127893 7.35456588 12.71988623 -1.65380897 10.10060742 12.91385589 -1.65380897 9.28052118 11.99752554 7.99179562 5.59406478 0.93107787 13.18801034 10.18455355 2.15348110 8.21650191 7.57254941 3.70368767 9.68152780 10.69458894 9.01856269 10.38299789 10.00702474 9.03351303 3.96084529 11.59139303 10.13892771 5.98999274 7.63153941 6.19788701 10.25077201 15.15262412 9.02172401 11.33269059 11.82970133 7.81374272 2.15348110 5.88529615 7.34613783 9.69541867 10.93180418 -1.65380897 6.21650143 7.57735858 10.36781147 10.70698452 6.88141257 5.93859397 4.98999274 10.06424211 11.58633250 2.98999274 13.86991377 5.59406478 7.12092419 11.11100900 13.38749714 12.57585753 8.93485201 11.08401854 10.60205122 9.98285714 11.44942524 5.15349326 8.71027195 11.76425359 9.77135328 NA 10.48664771 10.90670912 -0.06884647 2.04103266 9.71627983 10.60970012 10.30903347 9.34965543 15.37499317 10.50884348 11.63817143 8.28424668 3.83799368 15.06353272 6.11432121 12.31839930 10.72578656 10.59079857 9.28498183 8.61760043 10.36619368 -0.0127130 0.7305700 0.7604400 -0.0296530 0.5870400 0.1319500 0.8251000 0.2535500 -0.5303200 2.9461000 2.1843000 3.6569000 -0.0136190 -0.0224890 0.2459100 3.6569000 -0.2839400 -0.0098185 0.5973200 -0.1689100 2.2056000 0.0000000 1.2887000 0.2373600 0.8465200 -0.1863000 0.0279190 0.1439100 1.6105000 -0.0127130 -0.0127130 -0.1084100 -0.0919560 0.2039600 -0.1747400 0.5334600 0.2354600 0.2535500 -0.5303200 -0.2913000 -0.0843860 0.1995900 -0.9025900 -0.2678300 -0.2678300 -0.2678300 -0.0306770 -0.0224890 -0.0318130 0.0774300 -0.3058400 -0.0098185 0.5805900 0.5805900 -0.1689100 -0.3810000 0.7991700 0.5861400 -0.6957800 0.8573900 -0.1191300 -0.1863000 0.1439100 0.1374600 0.1949700 -0.4538300 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.208 0.000 0.000 0.134 -0.903 3.657 -0.237 0.000 0.169 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.208 0.000 0.000 0.134 -0.903 3.657 -0.237 0.000 0.169 8.9301604 13.6855699 7.2886520 9.5665157 4.8696987 11.0571590 -1.6538090 NA 8.5543717 7.4122269 NA 8.4287521 1.3461343 10.3726608 8.7523425 4.3685030 4.7555286 9.1931949 10.4425232 10.1014423 9.8970044 7.5964358 10.6801313 2.7384652 9.1679113 9.0335130 0.9310779 -1.6538090 11.3266341 0.9310779 11.9831018 12.4241214 6.4229528 10.2934091 8.0431050 9.3918970 6.1663158 1.5160656 -0.6538090 8.2871851 8.1242144 9.1502685 9.5322517 2.8696938 7.7345850 7.0943300 10.4850492 6.5653062 10.1336320 NA 9.5555907 4.8055711 3.0465784 9.1542490 6.3593771 2.8055607 9.0833847 9.1877017 5.4546629 1.1534811 13.5862207 NA 11.0878151 NA 6.0603825 3.9899927 8.1324072 8.8578902 16.1832891 5.6770543 9.0025622 12.6363003 9.6051274 10.6456317 12.7198862 12.4383165 8.5761578 11.0770321 12.5811793 9.3698917 9.6954187 9.0352618 0.6680283 7.9235664 12.3429640 10.8831131 8.8228837 8.8409931 9.6280675 10.3479994 10.2106640 6.8137427 9.7655710 11.5226223 7.8137427 1.9311157 9.7211768 9.5258040 11.0441910 9.6158486 7.9497637 9.2226544 12.3643376 5.0043486 9.0185627 9.8359853 10.8504599 9.5916901 10.8354837 9.3712770 1.6680737 8.8739663 7.8865947 4.5160593 10.7069845 7.4202786 10.2941396 10.0642421 8.2103236 12.8039672 10.4226190 9.6590205 12.2266776 10.2842468 9.7744977 0.9310779 TCGA-A8-A07Z 85 0 NA 853 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 5 3 NA 2 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 3.893595e-07 1.39057e-07 12.03287156 3.55967535 7.60770611 11.83773542 NA 8.73626188 -1.02532386 9.23091941 11.52617863 10.39414422 10.43003787 7.05685986 9.73875298 8.69238709 7.43003766 8.48646339 10.69538247 10.08649838 5.27849035 2.97471285 9.39150826 10.56576547 14.79306818 9.35192112 8.54835801 10.68465606 6.30562768 9.81860039 -1.02532386 -0.02532386 6.52160515 9.98873112 11.29945383 7.08323465 12.84777023 13.31421278 8.19629770 6.36702852 3.22263457 4.85735403 7.22737624 10.20292810 5.91722407 13.21281684 0.55963864 12.39032045 14.78402665 1.97471285 9.61661794 10.48646339 5.64713603 6.98593754 1.55968759 15.25651053 8.96481476 -1.02532386 8.70772597 NA 2.67516104 9.91722527 10.20533166 9.10270510 12.36635705 9.48250527 10.18902987 1.29666297 10.41454159 10.29776540 7.38833852 8.11426186 1.29666297 11.81194439 14.96795870 5.59059903 10.98488907 10.61676238 8.51774260 -0.02532386 1.78207302 6.71617743 8.15213017 11.74640649 NA 2.55966312 8.68206970 10.38992426 10.52305094 9.13458213 3.78206253 5.60406836 10.01500044 11.51822589 4.80760222 13.59910636 7.96339551 7.37985226 11.81902414 10.19508905 12.04634065 8.89208284 10.64669397 10.38144713 9.98033526 10.96906413 5.72959899 9.27277323 10.82685002 12.09072970 -0.02532386 11.31149619 8.52737965 1.29666297 2.15104699 9.24149725 10.67037397 9.34103284 9.43721296 15.26132260 10.56108141 8.71786215 6.50609252 0.97467614 15.48121974 4.58942194 11.63604344 10.56810186 10.94193695 9.24850637 7.95199044 11.00834017 -0.0305500 1.6422000 1.6805000 -0.0054097 -0.0054097 0.0000000 1.1138000 -0.0342330 0.0016935 -0.0177160 -0.0177160 -0.0111060 0.5728900 0.5954500 -0.0378750 -0.0378750 -0.0378750 1.0589000 1.0589000 -0.0512820 -0.0078967 -0.0478110 -0.0840070 -0.0840070 0.4151700 -0.0943380 -0.0943380 0.6693600 1.5846000 -0.0305500 -0.0305500 -0.0380440 -0.0054097 -0.0638480 0.0136210 1.1138000 1.1138000 -0.0404030 0.0016935 -0.0313690 -0.0238500 0.8429800 -0.0415580 0.9936200 0.9936200 0.9936200 0.9936200 0.5877400 0.5877400 -0.0378750 -0.0239870 1.0589000 1.0597000 1.0597000 -0.0071910 -0.0370570 -0.0469990 -0.0590100 -0.0840070 -0.0840070 -0.0285860 -0.0943380 0.6693600 1.5846000 1.6792000 -0.0886490 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.642 1.585 1.585 1.566 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.994 0.994 0.330 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.642 1.585 1.585 1.566 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.994 0.994 0.330 7.4300377 12.5368338 3.4982764 9.8256788 1.1794474 10.7699386 2.1446338 NA 9.3872805 8.5331315 NA 5.3841016 2.2966336 10.0568597 8.7511437 3.8816059 5.5445658 9.0621735 7.3234385 11.0661460 9.7562753 6.3755903 10.7523770 1.9747128 9.1231874 10.1890299 2.6751610 0.5596386 10.6642720 -1.0253239 12.2793472 11.9962112 6.6889566 9.7245802 9.6022446 9.9142899 1.9747128 0.5596386 NA 6.3755903 9.4331174 10.6742831 8.4009755 1.7820730 5.8349286 8.9069255 10.1389891 5.0621735 9.9491253 NA 12.6545206 2.5596631 3.4982764 9.6902610 7.8674962 2.1446338 9.2670324 7.2226384 5.0191059 2.9747128 13.5890755 1.5596876 10.9347126 NA 7.9113488 4.7560679 7.4217939 9.2943827 13.5254148 6.1446358 8.2368054 12.8477702 9.5359987 11.2038299 13.2128168 12.4896712 8.4565101 10.6122413 12.7314755 8.9803353 8.1521302 9.2391534 0.9746761 7.1295293 11.5528475 11.289294 7.269331 8.605888 9.538860 8.374715 10.923939 6.762613 8.724580 9.351921 7.826460 -1.025324 10.485475 9.077579 8.864975 10.210127 9.003998 9.272773 12.305067 4.857354 9.102705 11.077671 12.538979 10.301140 11.053195 8.917225 NA 9.614829 5.155017 3.434148 10.523051 4.222635 11.223406 10.015000 7.124457 12.779749 10.821768 9.841217 12.305768 9.969064 9.315674 1.296663 TCGA-A8-A081 80 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA 1 4 1 2 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.640872e-06 3.337367e-07 11.30078542 4.49996066 7.89779404 11.28583508 -1.94286170 10.11636086 2.58057968 9.56728608 11.75821455 6.23692498 9.90485677 7.44287882 9.36250824 9.78366029 5.52462163 9.74614075 9.42552288 9.72457149 7.20676335 5.09043851 9.93314962 9.12243253 14.10256278 11.46945394 9.53881574 10.70739503 7.21183477 10.72589254 0.05699963 5.92738213 8.27133556 11.63172819 11.51670415 5.85143174 13.87139859 13.84965421 7.62687203 4.20676042 1.37895546 5.89622098 8.62307050 8.99512578 4.48328051 13.09965903 2.30494904 8.87479942 12.90275146 1.86437436 9.22759236 10.77661916 10.25146549 7.26646986 -1.94286170 13.32349222 11.75687185 0.86433474 8.18243011 -1.94286170 4.65693106 10.83735111 11.25852776 9.74264123 10.17595741 10.11128150 9.61304334 3.05701697 11.70233708 9.89661395 6.85791632 7.96390698 13.62704996 11.36165290 14.39488217 8.40533509 11.31734794 12.42087737 10.76092000 0.64200836 8.57074411 8.41016342 9.72501496 10.37978956 NA 4.54886814 7.69182725 10.06684506 10.50332428 5.15504892 6.91188449 5.16554218 10.67333549 11.98331241 3.72944401 13.54187075 7.00246063 8.14182462 11.03572686 12.29123509 13.22850598 8.54586067 10.57788054 10.84042397 10.26057851 10.74963189 5.70806857 9.10550340 12.99324024 10.82768027 -0.35808410 10.03679878 8.78493677 2.86437436 3.19123099 10.45469102 10.69590476 10.25177329 9.75006764 14.73046351 10.19176361 10.67906826 8.87239970 0.64200836 15.73056013 7.76264846 12.16725499 10.53578606 10.53072215 8.50203139 8.29303061 10.41443092 -0.486600 0.057927 0.600240 0.052155 1.765100 -0.488580 -0.484610 -0.467920 -0.432150 3.656900 -1.064100 0.643580 -1.079600 0.078571 0.085065 2.040700 -0.500900 0.614970 0.614970 -0.495490 -0.375680 -0.490370 -0.530330 0.775390 0.775390 -0.088120 -0.088120 -0.088120 1.072500 -0.518770 -0.486600 0.019212 0.052155 -0.517540 -0.481870 -0.484610 -0.484610 -0.467920 0.378070 -0.467070 0.041730 0.041730 -1.073900 -1.064800 -1.060900 0.062211 0.062211 0.078571 -0.027421 0.069379 -0.500900 0.614970 -0.501530 0.019212 -0.490160 -0.390360 -0.477330 -0.547350 -0.530330 0.775390 -0.405620 -0.088120 -0.088120 0.778470 0.184330 0.023976 0.000 0.000 0.000 -0.499 0.596 0.000 -0.490 -0.390 -0.478 0.105 -0.478 -0.530 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.184 0.000 0.589 0.589 0.630 0.630 -0.489 -0.489 -0.485 -0.485 -0.419 -0.419 0.000 0.000 -1.074 0.557 -1.061 0.000 0.000 0.000 0.000 0.000 -0.499 0.596 0.000 -0.490 -0.390 -0.478 0.105 -0.478 -0.530 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.184 0.000 0.589 0.589 0.630 0.630 -0.489 -0.489 -0.485 -0.485 -0.419 -0.419 0.000 0.000 -1.074 0.557 -1.061 0.000 0.000 8.7746929 10.4325989 0.8643347 9.6822687 5.8203628 10.3412622 2.8119025 NA 8.7522448 3.9396591 NA 8.5093502 -0.3580841 10.7375957 9.2948238 6.3144047 8.5776350 9.8210587 10.6943205 9.3354658 9.7517138 8.4780294 9.4520149 2.0569996 10.4285208 9.6130433 1.3789555 -0.9428617 11.0534899 2.2269400 12.0644817 12.3079809 6.7539842 11.1791973 8.3630782 9.6499405 6.4493336 3.3049490 -0.9428617 9.0703391 9.1830756 9.6532062 12.4915143 2.8643744 9.2558175 7.0849221 10.2288187 7.7223526 9.6513409 NA 7.8579163 4.2067604 5.6643463 9.6207990 6.5368378 6.6039111 8.6249723 9.1785498 8.6763192 -0.9428617 13.5216898 -0.9428617 10.0759120 -1.9428617 9.3090904 3.4493369 8.6790683 9.1384999 15.0435453 6.2566880 9.2400314 13.8713986 9.9672843 11.2629623 13.0996590 11.5919272 8.6202125 11.5759043 12.1508466 7.4255231 9.7250150 6.9995310 -0.3580841 8.2858350 11.4071268 10.9755070 6.8835646 8.7232404 8.8859462 10.5400764 10.9622887 7.0199120 5.1862985 11.4694539 6.9818287 -1.9428617 8.8707975 7.9752089 11.0173804 10.3073148 8.8048570 8.9518343 12.2159416 8.0793840 9.7426412 10.3530723 11.0247830 8.0570164 10.8974009 8.9980640 0.3789555 8.8315483 6.8252005 7.8285059 10.5033243 4.5327471 10.0879938 10.6733355 7.6000482 12.6228325 9.9250673 10.1895161 13.0956782 10.6983908 9.8119038 2.5805797 TCGA-A8-A082 58 0 NA 549 breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 2 NA 2 4 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 11.9276298 3.2630344 6.1210154 11.0650122 -1.3219281 10.2588016 NA 9.9454438 12.1360940 7.8875253 10.4858293 7.9259994 9.1548181 10.5137276 6.4462562 8.5759174 10.7940909 9.7983098 6.5484366 -1.3219281 10.3671963 10.4830096 14.3226887 11.7450020 8.9236246 10.8626374 3.5360529 10.3416256 NA 1.0000000 7.3146965 10.0045014 12.3534777 8.1147834 12.3018391 13.2926667 9.5690961 5.2927817 -1.3219281 5.9068906 7.8529976 8.2384047 6.9541963 12.7904300 0.6780719 12.2837829 14.0843766 0.6780719 10.3510762 10.8360504 5.4594316 7.5453506 -1.3219281 14.7256562 9.5827065 3.7224660 8.3905989 3.8073549 4.2630344 9.8195405 10.4773535 9.7628803 12.5483403 10.1517777 9.6617781 -1.3219281 11.8551799 10.0932855 7.3037807 7.0574503 9.1282522 11.9654957 14.9719566 8.3140802 12.1184220 11.2998949 6.8429788 -0.3219281 6.1456775 9.0885233 8.9436870 10.7628803 0.2630344 7.0134623 7.5607150 11.4239563 10.4994473 4.8278190 5.1538053 4.3219281 10.3566720 12.0829474 2.4854268 13.8241234 6.4127815 7.8875253 11.1525384 11.5339137 12.8907203 8.0356239 10.5984248 10.8838652 10.2565012 11.7019995 5.2172307 8.1375035 10.8486229 12.7382612 0.2630344 10.2592725 9.5857137 0.2630344 3.0007212 10.3811103 10.6596392 10.8558029 9.0563668 14.8736364 10.5853382 9.7807038 8.3940339 1.0000000 15.3476767 10.5898384 11.7890445 11.7548875 10.2914010 9.5282587 8.0832134 9.9434174 0.01080600 -0.00630980 -0.00630980 0.00000000 0.00000000 -0.00719580 0.00027728 -0.83009000 -0.84131000 3.65690000 3.65690000 0.80442000 -0.00056779 -0.00180140 0.80675000 3.65690000 -0.83793000 0.00305220 0.00305220 -0.01174900 0.01712400 0.00966470 0.01056400 0.01056400 0.01056400 -0.00885260 -0.00885260 -0.00885260 0.00944910 0.01391100 0.01080600 -0.00719580 0.00000000 -0.00719580 -0.00719580 0.00027728 0.00027728 -0.83009000 -0.85005000 -0.00443120 0.01391100 0.00447920 -0.84483000 -0.00595220 -0.00595220 -0.00595220 -0.00595220 -0.00180140 -0.00511310 0.80675000 -0.83793000 0.00305220 0.00305220 0.00305220 -0.00429290 0.01375700 0.02230400 0.01894300 0.01056400 0.01056400 0.00402430 -0.00885260 -0.00885260 -0.78707000 0.00569190 0.00485790 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 8.5652925 13.4862820 8.6205864 10.9983084 5.1375035 10.3196721 -1.3219281 NA 8.3715589 9.5407093 2.2630344 6.8224752 1.8479969 9.7675224 9.1466959 1.4854268 4.7655347 8.8034854 10.9280742 9.3101583 9.4670593 8.6220518 10.7455063 4.5360529 9.9194593 9.6617781 -1.3219281 NA 10.6183855 4.0356239 12.5765788 11.8192211 7.3819755 10.1644042 8.0443941 9.4536822 6.1779178 2.2630344 0.2630344 2.2630344 9.0895829 9.6395216 9.0443941 0.2630344 8.8720777 6.8579810 10.5747827 9.1927860 9.3219281 NA 7.2249664 4.2016339 3.8479969 8.8368457 7.3751785 NA 8.4195389 8.1415963 7.7734689 -1.3219281 13.3660490 -0.3219281 10.7625481 NA 7.9795681 3.9259994 7.8654240 8.7224660 17.904351 6.161888 8.217231 12.301839 10.414698 10.275193 12.790430 12.378295 8.357552 10.684398 12.001690 10.439623 8.943687 7.104337 1.678072 6.426265 12.261390 10.9212459 7.3957483 8.6146951 8.9212459 9.8354188 10.0051249 7.0312187 7.9092931 11.7450020 6.5728897 -1.3219281 10.6355368 8.5456904 11.1069555 9.1074786 9.5751610 9.6532034 12.1549447 1.0000000 9.7628803 10.1644042 12.1313425 10.3636967 10.7248549 9.1689228 -1.3219281 8.9239930 5.7099523 0.2630344 10.4994473 5.9909549 10.4594316 10.3566720 7.4296160 13.8163837 10.3522642 8.8579810 12.0902448 10.3527056 9.8442350 1.6780719 TCGA-A8-A083 67 0 NA 0 breast stage iib t3 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 2 NA 2 1 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 0 10.7762407 NA 7.8216707 11.9597762 0.6400656 10.3192909 -0.3599344 10.0356382 11.8027052 12.8427381 9.7719610 7.5166211 8.7494994 8.3393873 8.6826755 9.4787828 10.8293109 9.1472380 5.5389571 1.2250898 11.0856363 9.0947459 13.7027405 11.2099597 9.2682458 10.3341717 2.6989963 10.8035169 -0.9448043 6.0209266 5.5549878 11.7781625 12.8229639 4.4645310 13.2554655 12.6578984 8.5227471 4.8495590 -0.9448043 2.6989963 8.1239196 10.8919809 4.5787033 13.5252602 1.0551262 10.3425654 15.1486932 7.1558039 10.1847143 10.6169068 3.8100317 6.1844251 NA 14.3788483 10.6677797 NA 8.9961893 NA 2.7555713 9.6207196 9.7235833 11.8174198 11.3187042 10.1636660 9.6202437 0.6400656 10.3042550 9.9499593 6.8100292 8.8904026 4.0775079 11.4573543 14.1024998 8.8310893 12.1900491 11.2730993 9.3024758 -0.9448043 9.1406141 7.3972160 8.6116475 12.1322076 -0.3599344 3.9858829 7.3520576 9.3882970 10.9318503 5.6698517 2.3030793 3.3030647 9.9843999 11.9446455 3.9131192 13.0867997 6.9131228 7.9162282 11.0291976 11.1073700 13.0051506 8.5688693 10.0702080 10.6730681 10.3558373 11.0102465 5.2048880 8.9866177 11.0956025 10.2866628 NA 10.3457364 8.9416002 NA 4.2115807 10.2502061 10.7860362 10.2730993 9.3491879 14.7511718 9.9657843 9.2023465 9.2449660 1.8625109 16.0906173 8.8745222 12.4954917 10.8810941 10.1002186 9.7003497 8.5904168 10.9503779 3.4428e-03 8.1978e-01 8.1978e-01 6.2221e-03 0.0000e+00 6.9175e-03 8.1217e-01 8.5875e-03 8.5875e-03 -4.8719e-03 -4.8719e-03 -4.8719e-03 2.0546e-03 2.0546e-03 -5.1485e-03 -5.1485e-03 -5.1485e-03 -8.5745e-04 -8.5745e-04 -9.9602e-04 -8.5745e-04 2.8874e-03 -2.5861e-05 -2.5861e-05 -2.5861e-05 3.4428e-03 3.4428e-03 3.4428e-03 7.8973e-01 3.4428e-03 3.4428e-03 -5.8029e-04 0.0000e+00 6.9175e-03 -3.0213e-03 8.1217e-01 8.1217e-01 8.5875e-03 8.5875e-03 8.5875e-03 -7.0834e-03 -8.4444e-01 -2.1042e-03 2.5141e-04 2.5141e-04 2.5141e-04 -6.3765e-03 2.0546e-03 2.0546e-03 -5.1485e-03 -5.1485e-03 -8.5745e-04 -8.5745e-04 -8.5745e-04 -9.9602e-04 -8.5745e-04 -1.3838e-03 -8.6642e-01 -2.5861e-05 -2.5861e-05 -6.2544e-03 3.4428e-03 3.4428e-03 7.8570e-01 -6.6689e-03 -4.8719e-03 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 6.39053184 11.01333175 3.09953086 9.68085036 1.79605778 10.70888230 -0.35993442 NA 7.64759873 8.43560276 NA 4.94995974 3.78305847 10.46876953 9.46187803 -0.35993442 3.44746018 8.96653343 10.36944151 10.75623139 9.73622179 7.85604138 10.35119743 2.57869724 8.91001005 9.62024366 4.03241827 NA 10.48376349 1.86251090 13.41482250 12.10957630 6.38605906 10.44557929 11.16578798 9.40608082 NA 0.86251090 -1.94508208 10.05514155 9.44906815 10.52019769 10.25051374 2.69899630 7.42340757 6.34516038 10.22130460 4.93778693 9.73945187 NA 11.66985139 2.64011187 3.66985449 8.67867548 4.96154925 -0.94480435 9.70034972 6.78306240 6.75210898 NA 14.05441491 0.05519565 9.96465970 NA 7.84793178 4.68449898 7.03813544 8.13994983 13.78435707 4.09953928 8.56985561 13.25546547 10.42310225 10.74732110 13.52526020 12.58219087 9.45233495 10.49627019 12.93959829 8.47193894 8.61164749 8.34516038 0.05519565 8.11177939 11.09491739 11.203300 9.661084 8.932426 8.979212 7.999122 10.073067 4.640106 8.432352 11.209960 4.769386 NA 6.184425 6.429834 8.122576 9.891586 9.781785 8.581641 12.985879 2.142609 11.817420 10.519943 11.661200 8.727567 10.694256 9.298316 NA 9.815371 4.891823 1.055126 10.931850 4.546993 10.433978 9.984400 6.901509 13.856218 10.422010 10.642685 12.818250 9.847932 9.901415 -1.945082 TCGA-A8-A084 81 0 NA 458 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 3 NA 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1.630444e-06 3.122126e-07 11.4887579 3.0888539 6.8820830 11.2725970 NA 10.2894131 0.2143735 9.5234771 12.0771462 10.7228348 9.9280526 8.1529794 8.2532987 9.2651354 5.6181006 9.8654314 11.1180105 9.9182832 6.7008794 1.6294266 10.7032240 11.1086922 13.6046830 10.8728888 9.7715243 10.7284362 4.1529784 10.5941046 NA 2.4367748 7.2367471 12.2839414 12.2998522 7.5748607 12.4793109 13.7719631 9.2687579 6.1292624 3.6738164 5.3708827 8.5452966 10.8929798 6.9008801 13.2099113 NA 11.1758294 13.4664537 8.0806284 9.1051506 11.0198549 7.6294171 8.5894189 0.9513640 15.2805386 8.0556821 2.0888539 8.5059342 1.4367482 3.0888539 10.6863935 10.2660418 9.2505533 11.8751185 10.1987981 9.9303417 NA 11.9492304 10.3359132 6.5120609 9.3097767 9.0504301 11.2804689 15.2354320 8.9676522 11.1639633 10.8170785 9.3564867 2.0888539 4.7791651 9.1607987 8.3385011 12.4828242 NA 5.9692679 7.2587742 8.4780403 10.8361264 5.7168812 4.8773467 4.5120625 10.4858427 12.2575209 1.6294266 13.7192814 5.5363078 6.8142928 11.9122161 14.0322294 13.0879520 8.2965285 10.3302904 10.1632335 9.6132587 11.3410842 3.9148228 8.9136629 12.0970228 9.4670451 -1.3707133 10.2809175 9.0388082 2.3298699 3.4908781 10.1627469 8.2605940 10.3788677 9.2450468 15.1055622 10.0435739 9.5886948 9.6406444 0.9513640 15.4332582 10.1500359 13.2511257 11.5013224 10.0388082 9.8660294 8.4780403 10.8461024 -0.3905100 0.9043200 2.0999000 0.9279700 0.0288200 -0.4487800 -0.4159700 0.0280290 1.7125000 -0.0952520 -0.0952520 -0.0952520 -0.4191500 -0.0910230 0.0448570 0.0306920 0.0306920 0.0291330 0.0130740 0.0044411 0.0332670 -0.8682300 -0.8534500 -0.8534500 -0.8534500 0.0045800 0.0045800 -0.0393940 0.0891270 -0.3905100 -0.3905100 -0.0045695 0.0493980 -0.4250600 -0.4487800 -0.4159700 -0.4223300 0.0280290 0.0221990 0.0063871 0.0052749 0.0000000 -0.3441600 0.0181030 0.0181030 0.0181030 0.0181030 -0.4453900 -0.4523700 0.0448570 0.0306920 0.0291330 0.0329860 0.0558750 0.0044411 0.0332670 -0.3929700 -0.7250900 -0.8534500 -0.8534500 -0.9207700 0.0045800 -0.0588570 0.0774300 0.0115180 -0.2562400 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.256 0.000 0.000 0.000 0.000 -0.449 -0.449 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.256 0.000 0.000 0.000 0.000 -0.449 -0.449 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 8.2624125 13.8821565 4.5363078 10.0666491 2.3298699 11.4154826 -0.3705268 NA 8.7778937 8.4367723 NA 8.0161202 4.1529784 10.7460861 9.3759315 -0.3705268 5.5601555 8.6223557 10.7628805 10.3302904 9.6791500 7.7842350 9.9603340 1.4367482 7.1763118 9.9303417 0.6293799 -0.3705268 10.0393384 2.3298699 11.8854784 12.0614370 7.2624125 10.1377072 11.5419324 9.0847444 6.6237703 0.9513640 0.9513640 3.9513453 8.5512580 9.6427398 10.9394619 0.9513640 9.9558017 7.2876284 9.4238330 6.3505167 9.3115340 NA 12.3982218 3.2732772 3.3298555 9.6198757 6.3245064 0.9513640 9.7215136 6.8582359 4.7586976 1.7993360 13.6253610 -1.3707133 10.0960035 NA 5.9055410 3.5363016 8.0577773 7.6009610 13.2219385 6.3708844 7.8266336 12.4793109 10.4760829 11.5156854 13.2099113 11.4660594 8.9953460 10.7993422 13.0687936 7.1252719 8.3385011 7.7817020 -0.3705268 5.7483593 12.3102162 11.3049332 8.5616320 9.0066276 9.1685761 8.4827269 11.0265303 4.9513453 8.3725687 10.8728888 6.0723610 0.2143735 6.0044564 8.9381317 10.4551710 11.0777917 8.3725687 9.4222076 11.5874261 3.4873963 9.2505533 10.7218440 11.4581488 9.5280186 10.8609384 9.3641268 0.6293799 9.9675463 6.2732734 2.9513453 10.8361264 7.5332994 10.6697069 10.4858427 7.3367761 12.6005116 10.0302966 10.7823357 12.2183660 10.8582359 10.0179727 -0.3705268 TCGA-A8-A085 44 0 NA 1124 breast stage iib t2 n1a m0 2-10-2014 male 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.630444e-06 5.550446e-07 11.74533831 3.59579007 6.92635293 11.29955960 -0.04811385 10.57970004 -2.04811385 9.94239677 12.23900125 10.63405503 10.14976922 7.29845212 10.21315174 10.51823012 7.76732176 8.98811175 10.85129516 9.76732159 6.96316544 NA 10.68262061 9.48429425 14.62219337 10.67794343 8.73739068 10.91862394 1.12187744 10.59556445 NA 0.27381424 8.30949045 10.09436448 12.79811418 7.12436536 13.10287547 13.27826237 8.12686396 4.92921816 2.70681785 5.34425684 8.64803647 9.21755330 6.78166134 13.08744713 -0.04811385 10.53995004 13.98944228 -0.46315135 9.14147877 10.47255692 4.95193742 6.23734000 -0.04811385 11.91473847 7.03142277 1.41137201 7.81147296 NA 5.91194080 9.25799992 10.53266791 9.54905958 11.84912193 10.08475923 9.63229767 -1.04811385 11.42018041 10.28983884 6.09149040 7.52747779 1.85881652 12.57576258 14.61224060 8.08976189 10.81612439 11.29706620 8.62613063 1.53689837 4.77211791 8.34640071 9.01802738 10.50340618 -1.04811385 7.41341807 7.79585914 10.54999071 11.31894336 4.77211791 2.70681785 5.62436414 8.97499958 11.92787576 5.19986469 13.88054914 4.25571976 7.43776788 11.90813284 11.35028115 12.69240416 8.30066646 10.96229148 11.07298604 10.66618378 11.41852456 5.19034226 8.30398162 12.74919444 13.36880172 2.27387391 9.64673132 8.79350252 -2.04811385 3.12985998 9.23560549 10.20903134 9.61771833 8.93635673 14.92369507 11.30880283 10.30618761 8.69003046 2.03938409 15.13032104 10.70745180 10.93849135 10.53924694 9.88304508 9.60657418 8.34318172 10.37620431 -0.0018181 -0.0018181 0.7786600 -0.0020950 0.1451600 0.0047022 0.0134760 -0.0028613 -0.8560000 0.0072050 0.0072050 0.8254600 -0.0011254 0.0040654 0.0161290 0.7472500 0.0148720 -0.8648500 -0.0026489 -0.8503700 0.0158500 0.8087500 -0.8796200 -0.0506570 2.7660000 1.3223000 -0.0697500 -0.0697500 0.8174500 -0.0666700 -0.0018181 0.0164090 -0.0020950 -0.8796400 0.8180300 0.0134760 0.0134760 -0.0028613 0.0052581 -0.0196050 0.0123590 0.0083183 -0.8518700 -0.0153450 -0.0153450 -0.0045862 -0.0163080 0.0040654 0.0187860 -0.8599600 -0.8502800 -0.8648500 -0.0096972 -0.0096972 -0.8384200 -0.8620300 0.0027578 -0.8755700 -0.8796200 0.7096200 -0.8775200 -0.9130500 -0.0697500 0.0000000 -0.0022335 -0.8793900 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 7.6083628 13.4570054 2.1998765 9.1698959 3.6378768 11.0365805 0.9519607 NA 8.7487889 8.1318472 -1.0481139 7.6239217 4.3094891 10.3839580 10.0760596 3.0394016 5.9292182 9.6225946 11.5568389 10.8847067 8.8652390 7.7911420 11.8634238 0.2738142 9.7155657 9.6322977 0.7593263 NA 10.9363567 3.3782064 12.1028755 12.1429203 7.2940132 10.0695813 7.1193562 9.6114882 3.4755000 0.9519607 -2.0481139 NA 8.5065270 9.0624215 10.4988327 2.5957901 8.8361851 6.4317182 9.6900305 7.7528382 10.6190498 NA 12.6881816 1.7592837 4.4910963 9.3477562 6.8367498 -2.0481139 9.0024671 8.0552260 2.2738739 -2.0481139 13.3474054 1.4113720 11.0465108 NA 9.0139845 5.0812203 8.1565094 5.8467566 14.487894 6.365567 8.445794 13.102875 9.225151 10.386045 13.087447 14.077029 8.990116 10.282855 11.926174 11.424121 9.018027 9.251146 2.273874 8.391769 12.120062 11.183009 7.034087 8.997015 6.415463 9.791142 10.845786 4.291788 4.595796 10.677943 6.813026 -1.048114 4.081220 8.218385 10.574219 9.325347 7.271362 8.648036 15.107913 -2.048114 9.549060 9.415463 9.171712 9.795859 10.787397 8.833817 NA 8.649280 6.101228 2.039384 11.318943 7.940623 10.823266 8.975000 7.551851 13.327894 10.600071 9.529367 12.276189 10.012634 10.314978 -2.048114 TCGA-A8-A086 59 0 NA 396 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 2 1 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.112456e-07 11.14321687 4.34440954 7.40684956 11.18467820 NA 10.77762486 1.12941491 10.36267305 11.52247968 9.38745689 9.61723584 7.20773671 8.82785236 9.36301531 8.73461073 8.72505297 9.87374908 9.38543600 7.20162406 2.22894180 9.68836310 9.26015013 12.97538975 11.67863033 10.45100180 10.24870750 3.67959270 10.19548110 -1.67807191 -1.67807191 7.97846565 11.21078408 12.44922911 7.20468362 12.07337565 12.39073512 10.27040805 5.66189208 1.12941491 8.25720584 8.29502042 8.28493697 8.07023367 12.22723976 3.22892641 9.55266180 13.37052768 2.32204351 9.12214802 11.10810616 6.07692887 3.36643413 -1.67807191 13.31103120 9.22781880 1.64394852 8.22290742 -0.09295553 4.27623609 9.43448041 10.14182079 9.56402389 10.55506120 9.77376710 9.80333571 1.49195568 11.25166910 9.70844230 6.95503609 7.59116775 3.18002052 11.35288032 14.93515400 8.10731334 10.80333571 11.38661520 8.44227879 0.64394852 0.90696754 8.21837337 9.35683972 11.83206315 1.12941491 6.87278814 6.88428288 10.79447785 11.31851428 9.25129919 5.37732160 5.18002052 9.96092925 12.00996319 3.67959270 14.06377111 6.09682688 7.52661191 12.50296006 12.79066486 12.50156118 7.83576810 10.50474551 11.54453388 11.38051458 11.11787754 5.04996178 8.12617169 11.77556868 12.38636257 -0.09295553 10.35752726 10.63605749 -1.67807191 1.76829021 10.18545280 10.65099615 9.70898108 9.50753580 15.18930748 10.52905509 11.41809706 7.58882705 3.87662499 15.56582843 7.31356240 12.13451899 11.02161325 9.92288287 9.08276086 7.73778274 9.87250867 -0.00691950 -0.00691950 -0.00512270 -0.00664320 -0.00664320 -0.00910890 0.68645000 -0.00456950 -0.00456950 3.65690000 3.65690000 3.58580000 0.00666530 0.00666530 -0.00263220 3.05670000 3.05670000 -0.00290910 -0.00290910 -0.78501000 0.00485790 0.02104300 0.72716000 0.72716000 0.72716000 0.02272500 0.02272500 0.02272500 0.69335000 0.02132300 -0.00691950 0.00027728 -0.00664320 -0.00910890 -0.00553750 -0.01684100 0.69970000 -0.00456950 -0.00456950 -0.00456950 -0.01068500 -0.00747200 -0.76757000 -0.01428400 -0.01428400 0.00000000 0.01228700 0.00666530 0.00666530 -0.76544000 -0.76689000 -0.00290910 -0.00290910 -0.00290910 -0.75305000 0.00485790 -0.01718800 -0.75037000 -0.73722000 0.72716000 0.78157000 0.02272500 0.02272500 0.69335000 -0.00871460 -0.01849000 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.737 -0.010 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.737 -0.010 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 8.5339293 14.1039640 7.4768588 9.7732520 2.5669369 10.1017601 0.3220435 -1.6780719 8.3732497 9.2251696 2.6439716 9.0845060 0.6439485 10.3807091 8.8288442 3.7143554 7.4068496 9.9690494 8.6360576 10.0263768 9.2232698 7.7835202 10.9158987 2.9658951 9.9172982 9.8033357 0.6439485 0.6439485 10.5475495 2.9070060 12.4263938 11.9887086 8.1784662 10.5127914 8.7711893 9.3318693 5.8298343 0.9069675 0.6439485 2.2289418 8.1800220 8.7783952 10.4743256 3.6074487 6.0902247 6.1675305 9.8971073 6.5888270 10.1831277 -1.6780719 10.3647262 2.9070060 4.3444095 9.7263948 6.7947719 2.1293819 10.0893976 8.2498189 4.4513232 -0.6780719 13.8187074 0.3220435 10.2464822 -1.6780719 8.4240163 3.8766250 8.1017604 8.0968279 15.707564 5.821886 8.158091 12.073376 9.266753 10.080680 12.227240 13.030963 10.778968 10.689456 12.440414 11.444384 9.356840 9.165962 2.643972 7.750401 11.302537 11.245368 7.151763 8.617798 9.089398 9.804849 10.130293 6.360959 8.694906 11.678630 6.398857 2.322044 6.360959 7.663071 11.270591 9.616087 9.945465 8.788627 13.083800 3.531494 9.564024 10.447777 11.684943 9.825370 10.484117 8.885237 NA 8.632517 6.969499 4.129398 11.318514 8.481912 10.203155 9.960929 7.461592 14.020610 10.317101 9.708442 12.545062 10.052511 9.653518 1.129415 TCGA-A8-A08A 89 0 NA 30 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 2 NA 2 1 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.39057e-07 11.1461879 3.9256387 7.0049946 11.6349668 0.1182268 9.3089296 0.1182268 9.4816866 11.8429378 9.3959567 9.4129026 7.4991036 8.8687096 8.9783341 8.1107479 9.4439621 10.9403215 9.3630420 6.0009239 1.9927684 10.2141184 10.8373854 12.8820475 11.2447713 8.0782837 10.1276440 6.0009239 10.8244613 1.3406762 3.1182767 7.5722386 10.4994642 11.9295228 6.6260770 13.1407075 12.8737954 9.2484234 7.3503028 4.2057444 5.6101360 7.6881377 10.8181435 7.5584590 13.4587811 0.1182268 11.9805318 14.0075957 6.3975052 9.5953722 10.4209208 8.6352951 8.3471004 0.5333640 14.5385022 13.3735087 1.7032336 8.5459441 NA 2.9927503 9.4991036 10.6438027 10.0075323 11.4252929 10.2969467 10.2246267 1.9927684 10.7910018 10.2281126 7.1915311 8.8082798 4.4875185 11.2728890 15.0417177 8.0694696 11.4009842 11.0556557 9.0974688 2.1182933 0.8552722 8.8974540 8.0666489 10.3940185 NA 5.9511728 7.7669390 7.8974540 9.0341612 11.2514241 5.6522599 4.9256387 10.0450720 11.5050425 1.1182933 13.6815576 6.8776154 6.7378909 12.1075581 13.3013486 12.5765176 8.8798332 10.6963400 10.5892796 10.6873653 10.9519626 5.0724789 9.1239064 11.8977276 10.3889666 -0.4667357 10.3309809 8.6626025 1.1182933 2.7128379 9.8348156 11.2413255 9.9988858 8.9741886 14.6214865 10.4140508 9.5220041 8.2441259 -1.4667357 15.5758444 6.8776154 13.2627277 11.1917540 10.3027440 9.9293889 7.6522606 11.1746238 0.00041593 1.32790000 1.32790000 -0.00221680 -0.00221680 0.00000000 -0.00041585 -0.00733390 -0.00733390 0.00889200 0.00889200 0.00083195 -0.00456950 0.00763920 0.01297600 0.01297600 0.01297600 0.00000000 0.00000000 0.00180300 0.00249690 0.00958830 -0.00429290 -0.00429290 -0.00429290 -0.01752900 -0.01752900 -0.02810600 0.01768400 -0.00394630 0.00041593 -0.00387790 -0.00221680 -0.04263500 -0.00861270 -0.00041585 -0.00041585 0.01098200 -0.00733390 -0.00456950 0.00374650 0.00374650 0.00889200 0.00471900 0.00471900 0.00471900 -0.00468790 0.00763920 0.02623300 -0.70899000 -0.70935000 0.00000000 0.00000000 0.00000000 0.00180300 0.00249690 0.00958830 0.70251000 -0.00429290 -0.00429290 0.01042400 -0.01752900 -0.02810600 0.01768400 -0.00072693 0.00875280 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.687 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.687 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7669390 13.7590540 7.2714117 9.8123495 3.1182767 10.6257462 -0.4667357 NA 8.7366674 8.7633399 NA 7.4904217 1.8552323 10.2902926 9.0311713 1.7032336 6.0090537 9.0955619 12.3992459 11.5705231 9.9156192 6.8642357 10.2539912 3.8908747 9.1192208 10.2246267 7.5191613 NA 11.0049946 1.9927684 11.9908285 12.0956811 7.6677460 10.0080393 7.2781530 9.6580868 3.4875121 1.9927684 -1.4667357 3.8908747 9.7119842 10.2363577 9.7699315 3.1182767 8.4756139 7.5940155 10.5059402 6.1332327 9.3788094 NA 13.6989723 4.2882035 3.2882109 9.4798966 7.4284096 2.2337654 9.3113964 7.7157136 6.0490186 -0.4667357 13.7098042 0.1182268 10.3748837 0.1182268 8.0029612 3.7032447 7.6392278 9.7723212 13.074753 4.742772 9.302331 13.140707 10.109331 11.378613 13.458781 13.105724 9.060796 10.435695 13.235276 9.998375 8.066649 9.900188 1.118293 6.588602 10.921337 11.1959877 8.0049946 8.6496632 9.0617735 8.0371450 10.0906874 7.6856045 9.2535636 11.2447713 7.1257761 6.1915311 7.0724778 7.8341752 10.7880528 10.1017505 8.9384608 8.0705380 12.9084267 4.6830676 10.0075323 10.4454602 11.5141730 9.8410894 10.7185045 8.3835060 0.1182268 9.0041308 6.0490186 3.2882109 9.0341612 7.1626763 10.5098834 10.0450720 7.3015035 13.9700960 10.1494086 9.4521825 12.5082716 10.5591511 9.5473399 1.8552323 TCGA-A8-A08B 52 0 NA 1156 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 4 NA NA NA 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 3.337367e-07 11.404679 2.821118 6.589311 10.467685 NA 9.819716 NA 9.791232 10.799836 9.324952 8.592616 7.406088 7.169854 9.526758 6.124907 8.950409 9.933566 9.304942 6.715944 1.821139 10.984147 10.357373 12.905104 11.219335 10.148679 9.844880 6.280557 10.567640 3.908592 2.143067 5.887216 11.237396 12.592203 8.268209 16.528714 12.130602 8.903275 6.786910 1.821139 3.280556 7.843494 11.264588 5.435835 12.713100 2.821118 8.535371 13.372954 8.049945 9.757602 11.433534 7.124907 5.549047 3.143051 14.467861 10.438594 NA 7.187448 NA NA 9.495318 9.947831 8.538802 10.846958 9.833751 9.215589 NA 10.734763 9.424752 7.264069 7.507627 11.470831 10.887215 14.964031 8.095201 10.083221 12.481568 8.025697 3.406088 NA 8.479338 8.903275 11.518094 NA 3.521566 6.763640 10.113448 10.657176 4.628482 4.950408 5.549047 10.253668 12.092881 2.991046 12.748904 6.786910 4.576014 10.751124 11.338795 12.699177 6.087913 10.949765 10.193991 9.811230 10.269242 5.728016 8.251579 12.383368 11.134009 NA 9.811230 8.973411 NA 2.991046 9.720483 7.775323 9.900611 9.530210 15.210253 9.314982 8.725008 9.042713 5.679106 15.689105 10.153163 12.861587 11.604943 9.570995 9.059531 7.721993 10.311977 -0.118870 0.973580 1.491100 -0.105390 0.179660 -0.560470 0.215760 0.578170 0.612080 -0.039394 -0.039394 3.656900 0.555330 0.815910 0.321570 0.321570 0.321570 0.000000 0.434630 -0.190740 0.379900 0.297400 -0.584120 3.656900 -0.580380 0.010564 0.010564 -0.221820 0.455470 -0.118870 -0.118870 -0.120820 -0.563660 -0.575550 -0.562900 0.073833 0.073833 0.580590 0.612080 -0.587840 -0.114950 -0.102990 -0.039394 0.151590 0.151590 0.151590 0.151590 0.227000 0.227000 0.321570 0.321570 0.000000 -0.558670 -0.558670 -0.194120 0.323120 0.297400 -0.585950 -0.584120 -0.589480 -0.554570 0.139540 -0.221820 0.455470 0.296120 0.273950 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.140 0.140 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.163 0.269 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.140 0.140 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.163 0.269 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 7.821126 11.888224 6.010950 8.751863 4.280556 10.381459 3.406088 NA 8.582677 7.500606 NA 5.576014 3.280556 11.052347 9.300906 3.143051 5.312981 9.452303 9.193991 9.734015 9.027628 8.417316 8.792670 NA 8.006001 9.215589 6.087913 NA 10.035445 3.821129 13.990894 12.475538 6.960677 10.136276 11.644095 8.766570 1.406101 1.406101 NA 6.960677 8.622026 9.308966 11.209143 2.143067 6.521011 6.493551 9.685312 6.960677 8.020798 NA 9.409841 3.143051 2.628470 9.748326 7.963539 5.654017 8.589310 7.940067 8.725008 2.821118 14.020568 NA 9.535372 NA 7.213444 5.679106 8.143054 7.798406 12.124855 4.406088 7.685312 16.528714 10.097250 11.339779 12.713100 10.534513 9.320972 10.217731 12.976577 10.981628 8.903275 8.493551 3.280556 7.078514 10.686859 10.9152037 3.9910547 9.1180422 7.9452472 8.4504826 10.0915499 6.0690534 6.3129791 11.2193353 5.4935513 0.8211387 6.1961664 7.2425177 10.4658837 9.3249519 7.1520424 8.5859976 11.1836178 6.9809975 8.5388024 10.5950894 9.8831722 8.6090287 10.3029255 8.3757150 10.1340090 8.1426483 8.1475555 6.9085884 10.6571764 4.2134406 10.3229632 10.2536680 8.0925891 14.2381214 9.9085888 10.6814371 12.3294160 10.7444535 9.0109507 NA TCGA-A8-A08C 65 0 NA 881 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 2 3 NA NA NA 1 4 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 10.4978390 3.8972501 7.6202132 11.2018609 0.0227584 11.5159694 -1.5623461 9.9971957 11.9086046 9.9371663 9.7704146 7.8019534 9.1477641 8.0852770 9.5567597 9.7870999 10.1914532 8.5541625 5.8724471 1.2451914 9.9842309 9.5741691 11.5127963 11.2039334 9.3349077 10.3941948 4.2451762 11.0872926 0.7597524 3.3447149 7.2224539 10.5976900 12.9307358 7.6738327 12.8850311 13.0447443 8.4739922 9.2699175 6.9216339 5.2958002 7.9574550 12.5132142 6.6714377 13.2193320 1.7597524 10.9878439 14.3783846 4.7776669 9.2168567 11.3316889 7.6374907 6.5875660 -1.5623461 13.4710640 11.9151975 2.3447149 8.1278164 NA 3.1382575 9.8290623 11.3594737 9.9890463 11.2123998 10.9798832 9.4072051 NA 11.7691555 9.8123148 7.4293406 9.1572075 6.0451481 12.7201108 14.7576848 8.6215658 11.6628754 11.8329511 8.3296022 2.8972598 -1.5623461 8.5266068 9.8577789 10.1049302 -0.5621331 5.9924082 7.2770223 8.6999135 10.9069517 11.5650069 4.9456124 4.4822158 10.2623797 11.7162681 -1.5623461 14.2356575 6.3265625 7.6027256 13.3788204 11.7844709 12.9873627 8.0133579 10.7057757 11.5728866 11.4451473 11.5299151 5.0525289 8.2338583 13.0999863 10.9572092 6.8682707 10.0543674 9.5272692 0.7597524 3.0275787 10.5483019 11.5314012 10.5961128 9.2018610 14.8971222 10.3563092 10.8109557 9.0321433 NA 15.3213927 8.7732091 12.2125028 10.2926870 10.5242866 9.4043241 8.3447091 11.4105185 1.48580000 2.73970000 2.76240000 0.89464000 0.84019000 -0.08657500 -0.05902500 0.77172000 0.71944000 0.84846000 0.84846000 0.84846000 -0.02605500 -0.02605500 -0.02523400 -0.02523400 -0.02523400 -0.03724300 -0.03724300 -0.05997900 -0.03003700 0.00914520 0.02171800 0.02171800 0.02171800 0.04639100 0.04639100 0.04639100 0.02710200 0.00233290 -0.05053000 -0.03639500 0.89464000 -0.04944900 -0.08657500 -0.05902500 -0.07161200 0.77172000 0.71944000 0.71944000 0.67540000 0.66710000 0.84846000 0.72335000 0.72335000 0.72335000 0.78269000 -0.02605500 -0.02605500 -0.02523400 -0.02523400 -0.03724300 -0.03724300 -0.03724300 -0.05997900 -0.03003700 0.00000000 -0.94013000 0.02171800 0.02171800 0.81213000 0.04639100 0.04639100 -0.00030243 -0.02743000 0.03408800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 0.000 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 0.000 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 7.3536982 12.6716630 5.6177275 9.2451736 2.2858165 10.4920838 NA -0.5621331 8.4971632 6.4546267 -1.5623461 6.7665832 0.0227584 10.0288734 9.0852770 0.4378669 4.9296727 9.1631850 12.6664870 9.7704146 10.0367411 8.3447091 10.2655583 1.6077209 10.0395894 9.4072051 5.9535190 NA 10.6411667 3.3920151 13.6071956 11.6217641 7.5463427 11.0605569 7.8386978 8.9346725 1.4378136 0.0227584 1.6077209 4.7597471 8.7069452 9.3484613 9.4307569 3.5671073 8.0910397 5.2579987 10.7133612 6.9013436 9.2903481 -0.5621331 13.2342132 1.7597524 4.1102463 10.3639775 6.0495066 -1.5623461 7.1417219 7.0562042 2.6857384 -0.5621331 14.0988451 -0.5621331 9.8242200 0.0227584 9.3035520 4.6077446 7.6952067 8.4808459 13.4819275 2.8972598 9.0086230 12.8850311 10.3412675 11.4973321 13.2193320 13.8242874 9.5025613 10.9413960 13.5801651 11.3114550 9.8577789 8.8161136 0.7597524 7.3655963 10.5176367 11.2903481 4.2451762 9.0038726 9.0180772 8.0095711 11.3608136 5.8640846 8.1708339 11.2039334 5.6569882 -1.5623461 9.6678391 5.0828303 11.0607856 10.2876146 8.6509228 7.6423897 14.8107687 3.3920151 9.9890463 10.4715858 11.4217029 9.9211306 11.0347072 9.7815595 0.0227584 9.1802543 5.7776696 0.0227584 10.9069517 6.6618208 11.2257783 10.2623797 7.6738327 13.8052334 9.9226415 10.3124158 13.0019086 10.0960301 10.9153239 -0.5621331 TCGA-A8-A08F 59 0 NA 1004 breast stage iiic t2 n3a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA NA NA 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-06 5.562279e-07 13.2210434 3.5205354 6.0694337 10.6267389 0.3506104 9.8236437 NA 9.6329307 12.1457071 6.6845158 9.6513483 7.2575048 9.2625057 9.5305236 7.1143806 9.5786314 9.8517882 9.6702866 7.1450303 4.6725441 10.0200902 9.6740446 14.2926096 10.0510542 8.8897732 11.2610074 7.0230402 10.5121663 NA 3.0135873 8.3009272 10.8131168 11.8677819 8.4764582 12.6581948 13.1094623 9.0591235 4.9944711 -0.2342955 6.6174013 7.8767877 5.3048104 8.5937885 12.2422716 NA 10.2023635 13.0911682 6.0040564 10.2223658 11.0242180 7.9229988 7.6963896 3.0875816 13.7388978 9.8270232 3.5730109 7.8819961 NA 3.8531174 9.6244100 10.2474514 9.6360166 9.4910183 9.9640971 9.9878431 NA 11.7348586 10.2901936 4.4935705 7.9179365 -0.2342955 11.4036353 14.8616052 8.6529944 11.5073296 9.4773189 9.0441015 1.3506104 7.3950088 8.5730067 8.9787562 9.7761800 NA 6.1143795 7.6111421 10.3808217 10.1892932 6.8100459 7.0324381 6.0694337 8.8570874 11.8407968 5.5858309 13.8599771 5.8741773 7.4764586 10.6364019 12.2945944 12.8673815 8.7443623 9.8303948 9.9896536 9.7970086 11.1439469 5.3655631 9.0253951 11.0645737 11.0719985 -0.2342955 10.5874259 9.7198483 0.3506104 2.3518262 9.9468042 10.0937659 9.9842152 9.5592553 15.4909517 11.1782218 10.1808656 7.4901658 0.3506104 14.9584456 8.5953746 11.6018996 10.4171522 9.8975089 9.4755973 8.6845151 10.3159659 -0.86397000 0.07124800 1.22510000 0.42085000 0.51856000 -0.44232000 0.86553000 0.44392000 -0.44262000 3.08270000 1.07900000 2.00670000 0.82823000 -0.45511000 -0.45168000 1.33690000 0.81825000 -0.50743000 3.65690000 -0.97551000 0.66456000 0.47512000 -0.51094000 0.25246000 1.53940000 0.18616000 -0.08956700 0.56418000 1.01380000 -0.52215000 -0.45018000 0.09985000 0.45825000 -0.47755000 -0.49965000 -0.50234000 -0.46449000 0.44392000 -0.42025000 -0.01986300 -0.38313000 0.76083000 -0.90434000 -0.00152430 -0.46174000 -0.45351000 -0.45351000 -0.45511000 -0.48187000 -0.97622000 -0.44868000 -0.43767000 -0.41058000 0.91986000 -0.93909000 0.00097064 0.02462200 -0.44469000 -0.51094000 0.88406000 -0.43929000 -0.23606000 -0.57437000 -0.47046000 -0.93526000 -0.09036100 -0.455 -0.455 -0.449 -0.449 -0.451 -0.451 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.159 -0.159 0.000 0.915 -0.470 0.000 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.308 -0.455 -0.455 -0.449 -0.449 -0.451 -0.451 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.159 -0.159 0.000 0.915 -0.470 0.000 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.308 8.9368287 13.5098551 6.0417774 10.0004694 4.8422548 10.9166685 1.0875986 NA 8.0064433 9.6134922 NA 8.3202410 3.6725385 10.0722834 9.6352458 6.5470117 6.2575048 8.3913609 9.6375572 10.3298015 8.7770889 8.5937885 10.9699175 3.5205354 9.9902566 9.9878431 1.7656620 NA 11.5433183 -0.2342955 12.7873260 12.3721728 7.9077590 8.8451369 8.7768791 9.1898181 5.0510545 2.3506104 -1.2344653 1.5729867 8.7628315 10.4786088 9.8458033 1.9355729 8.6945404 5.8100472 10.3449679 4.7656514 10.5754201 NA 10.4004630 3.4095131 3.9355729 8.2457961 7.9099789 1.9355729 9.8209344 9.7817638 8.1536691 2.0875647 13.1084906 -0.2342955 11.3732135 NA 7.2654978 5.7768804 8.0717139 9.0123927 14.211356 6.459138 8.160114 12.658195 9.977546 11.079669 12.242272 12.739529 10.017501 9.995672 12.128692 10.697128 8.978756 8.055671 2.573011 7.834430 11.601900 10.767764 7.774081 7.943072 9.496971 6.402277 9.358539 7.663498 4.672544 10.051054 6.690465 NA 8.510486 8.853804 10.654015 9.873523 10.751850 7.391360 11.153400 5.191918 9.636017 10.555186 11.257255 9.582636 10.806284 8.876788 4.123203 8.992377 6.320241 4.225082 10.189293 7.601702 10.320720 8.857087 7.573007 12.651444 9.969612 9.282337 12.118385 10.242904 9.470420 2.573011 TCGA-A8-A08G 41 0 NA 607 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 2 4 1 1 3 5 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.668684e-07 11.9137858 2.7999369 7.2121520 11.1201716 1.0223323 9.8022814 NA 10.1911787 12.2238389 12.4824177 10.4779484 7.4723602 9.2497717 9.4729497 8.0158727 9.0166810 10.9989940 10.0439025 7.2756683 3.4629030 10.9711119 9.4128035 14.0505050 11.9476701 8.8027503 10.5840246 5.8803084 10.6482842 0.5369481 1.7999162 7.9274995 10.8867349 12.9442099 9.1713487 13.2041010 13.7228911 8.0255443 4.1691714 0.2149951 6.0604625 8.8296825 9.7257367 6.6115782 13.0537334 1.6744155 10.7886198 14.6734594 2.6744155 8.8064948 11.6225060 8.0960868 6.4292912 1.6744155 14.4170320 9.2877752 2.7999369 7.1218629 -0.2000838 3.5368984 9.3545240 10.6051416 8.8306024 11.1884906 10.0643778 9.4041796 -0.2000838 11.5217464 10.2749930 6.5856596 7.8461498 2.0223323 10.7669212 14.5422972 9.3930834 12.1079897 11.8353070 8.4652709 1.2149951 4.6744042 8.8506907 8.8406816 10.4326275 0.2149951 6.1633397 8.2648212 9.7657194 11.0349521 5.2483944 6.1278623 5.0351532 10.6407131 12.1294512 4.7848285 13.9534080 5.7924025 7.5965155 11.9273922 13.3666235 12.7783477 8.9110708 10.1986788 11.1951122 10.8732533 11.3914575 5.7463531 8.9765237 11.7719576 11.4421373 2.1218774 10.7202880 9.5003748 1.3848787 3.0754471 9.0760596 9.7800747 10.5357732 9.9848105 14.9276477 11.0557506 9.8534086 8.2997809 2.8588364 15.7785339 7.5681195 11.8542003 10.8800864 10.8904886 9.1560204 8.4413847 11.1328220 -0.608060 1.467100 1.655800 -0.067056 -0.073743 0.322050 0.454450 -0.155410 -0.155410 3.656900 0.130950 0.615840 0.476150 -0.059939 -0.382690 2.987900 -0.599930 0.475640 0.453940 0.434460 -0.055769 3.656900 0.136720 0.669560 1.427800 -0.197000 -0.197000 -0.466000 1.433500 0.000000 -0.608060 -0.078231 -0.067056 0.322050 0.400940 0.453940 0.453940 -0.155410 -0.155410 -0.155410 0.932040 0.419490 -1.146000 -0.601480 -0.601580 -0.040269 -0.035857 -0.059939 -0.052126 1.552200 -0.597010 0.475640 0.453940 0.453940 0.430920 -0.185720 -0.581270 -0.571200 -1.110400 0.132280 -0.083672 -0.197000 -0.174240 -0.040480 -0.221450 -0.575160 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 8.6672138 12.9269084 7.9084599 9.3898982 2.4628899 10.3820771 1.2149951 -1.7848806 9.0596784 7.7886198 NA 7.0430776 1.0223323 10.5278556 9.3097101 4.6243641 6.3077291 9.7829288 8.5278554 9.6354593 10.4720776 6.9631654 10.1025740 3.0223323 8.9180111 9.4041796 2.2149641 -0.7851292 11.3355346 3.2593629 12.1274878 11.9756926 6.9930493 10.6571386 10.4497901 9.2366466 3.6072948 0.7999162 -1.7848806 6.3234980 9.3300163 9.3195714 9.2219998 2.7385301 11.2797727 6.6328251 9.3867750 6.0093875 10.0596784 NA 10.5752711 2.7999369 6.5503636 9.8554570 7.5775957 3.2593629 9.3221898 8.7355912 9.4910971 0.7999162 13.8883093 -0.2000838 10.6219748 0.2149951 7.9309348 4.0478612 7.9831572 9.2435694 15.341761 5.989759 8.833358 13.204101 10.551758 11.206494 13.053733 18.563874 8.598202 10.805092 13.027401 10.272288 8.840682 8.793345 2.214964 8.667214 13.292665 11.046874 7.956439 8.504991 9.318260 9.397988 10.645122 6.670299 7.157487 11.947670 6.662056 1.536898 7.470002 8.906228 9.773872 10.279715 10.112818 10.892032 11.809647 4.956438 8.830602 10.507869 12.074507 10.329366 10.700047 8.857024 1.384879 9.673841 5.933403 4.169171 11.034952 7.318261 10.332616 10.640713 7.439046 12.723565 10.585932 9.654804 12.548338 10.387713 9.737064 2.738530 TCGA-A8-A08H 66 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 8 2 2 NA 3 2 3 3 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.224912e-07 11.3599445 8.7803514 5.4916575 11.0739384 -1.1665027 10.1257668 -0.1665027 10.1246160 11.1437740 8.9169244 9.3928223 7.6180800 8.7992295 9.5502647 5.6148041 9.3909088 7.7934472 10.2586611 9.0955400 5.3570065 9.8221299 10.3667750 10.7952566 9.9761905 9.9742750 10.3152447 6.6472267 9.8682441 0.8334164 5.9729959 10.5351849 12.6958889 12.1633817 8.3745418 11.1266294 10.3422304 10.8397713 5.6278607 3.4184059 7.6148048 8.7388323 7.0380169 8.3667751 9.7649215 NA 11.9095927 10.8863528 4.5338872 9.5549717 8.7612231 8.8981881 4.9419702 NA 14.1052102 10.6204826 3.8334467 7.9882632 1.1553607 5.0033684 9.5681549 10.3117093 9.4987812 10.0459416 9.6213477 10.2763887 4.0813737 10.7711869 9.7575154 4.8995334 8.8006715 3.2928701 7.2805286 15.3105552 7.7663686 11.3101914 10.9761905 9.3937781 1.4184059 0.8334164 7.7221887 9.6726490 11.3813037 -1.1665027 2.1553607 6.9983524 10.5812187 11.3451979 5.0232687 7.3609226 8.3091785 11.1095696 11.7363855 NA 14.1458319 3.4773017 7.6568124 11.7375153 11.6233863 12.7079464 7.9729964 10.2171495 10.8506016 10.4397116 10.9380440 4.6408002 8.7478305 11.3013054 9.5476908 1.4184059 10.8277986 8.9819217 -0.1665027 1.8388308 9.7425883 10.1732952 10.3041041 8.9640159 14.9698356 9.8207092 9.8819321 6.2846566 2.2928701 12.6580062 6.7876414 13.0144421 12.2409785 9.6115223 9.5647642 8.2343246 9.4638488 -0.0035982 -0.0035982 -0.0276640 0.0036091 0.0021932 -0.0021044 -0.0071747 0.0244470 -0.0218100 -0.0330430 0.1896200 0.1896200 0.0021932 0.0021932 0.0055267 0.0055267 0.0055267 0.0340870 0.0340870 -0.0027967 -0.0874720 0.0110100 0.0270490 0.0270490 0.0270490 -0.0062421 -0.0011348 -0.0011348 0.0351330 -0.0263980 -0.0035982 -0.0030269 0.0083089 -0.0021044 -0.0021044 0.0042760 0.0042760 0.0244470 -0.0218100 -0.0218100 0.0037204 0.0037204 -0.0330430 -0.0649360 -0.0649360 -0.0649360 -0.0649360 0.0021932 -0.0093229 0.0055267 0.0055267 0.0340870 0.0340870 0.0340870 -0.0027967 -0.0874720 0.0161200 -0.1096100 0.0270490 0.0270490 -0.0294730 -0.0062421 -0.0011348 0.0473830 0.0016381 -0.0824980 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 0.00 0.00 9.7320466 13.9778247 5.2257608 10.7410870 2.9627341 9.7160882 4.3570100 -0.1665027 8.6343450 9.6391891 -1.1665027 9.0350055 1.6408060 10.5032161 9.0562402 1.1553607 10.8309776 9.5690013 7.2763887 8.8078598 9.3471038 7.2300502 12.5928133 5.4847826 7.9262023 10.2763887 3.9209126 NA 11.4333581 1.4184059 13.1251915 12.7168522 8.9209081 10.1514230 9.9755522 9.2897997 3.5883369 4.5338872 -0.1665027 0.4184598 8.1755201 9.4352160 8.6631681 7.0477641 6.2142084 5.7759592 9.9646591 5.6408002 9.6294849 1.6408060 11.4310323 4.5338872 4.5883309 9.3791626 5.9857304 4.1553769 10.5054285 10.7995901 5.6016282 4.3570100 13.8184421 2.1553607 10.6363654 -1.1665027 8.5933332 5.0232687 7.8723640 9.4370717 11.649029 6.380340 8.514684 11.126629 10.318429 10.411346 9.764922 10.716470 9.138367 10.761223 12.798237 11.348159 9.672649 8.263898 NA 7.109570 10.773024 11.278977 5.081374 9.199768 7.491657 9.012110 9.268396 7.858585 7.150858 9.976190 7.123464 -1.166503 6.128067 7.630263 11.560515 11.016770 8.162120 8.659994 11.131508 7.057447 9.498781 10.419816 10.843973 10.946536 10.578279 9.216069 NA 9.910007 7.207919 5.325300 11.345198 7.372604 10.336774 11.109570 7.380340 14.244493 10.419816 11.065866 12.532150 10.207398 9.616443 3.920913 TCGA-A8-A08I 53 0 NA 365 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 7 3 1 NA NA NA 1 3 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.840393e-07 1.946798e-07 12.8517520 4.0482623 6.8138017 12.0602392 -2.1804953 11.5533106 2.6774180 9.9370910 12.5783998 9.3062830 9.4709482 6.9918755 9.7696392 8.8355597 8.4767665 9.2696281 10.3153029 10.4907679 8.1999088 7.7516625 10.2597980 7.6284120 14.3928436 11.3126779 9.7794498 11.1514845 7.8801437 10.3840548 0.9893570 2.4633086 9.2288389 10.5735003 12.6239319 5.8801443 11.6812133 12.4965619 8.6844078 6.2415123 2.3430098 5.8962646 8.7240827 9.2824614 9.9079049 12.8062677 3.7967327 10.1489640 12.6867749 5.5198878 9.8445944 10.6824726 6.2457124 9.9292785 5.0191192 16.8363847 13.7006506 1.6268129 7.5507668 1.9893570 5.4415001 10.8285767 10.1129195 7.6602256 11.0986232 10.9695125 9.3361330 0.9893570 11.9143503 10.8677644 7.0744765 8.5550040 7.5268067 12.0285966 13.8789402 9.5456619 11.7050490 11.6357316 10.3469249 1.8194638 3.4918787 9.2956879 9.3321883 11.8809035 -2.1804953 3.3430098 7.6539192 11.2024771 11.0629195 6.1857694 8.3634462 5.8250733 8.5701547 11.8983492 0.1414328 13.5127443 7.4006481 8.0518691 11.4047626 10.9082362 12.7491686 7.8787922 10.3902524 11.7993196 11.4382819 12.2467608 6.1592982 7.8348629 12.4204061 13.0772040 6.4954042 10.9037581 9.4980480 1.8194638 4.0922159 10.0307278 10.5644919 11.6507551 10.3410483 15.0404591 10.1091786 10.7857731 7.7560859 2.5743438 15.0689966 7.8138011 12.9786886 11.4820050 11.0109699 9.9125354 9.1698346 10.1431614 -0.453080 -0.021921 0.794330 0.133620 0.158760 -0.438830 0.228700 -0.754180 -0.925400 0.043015 0.043015 0.467590 -0.315060 -0.318230 0.082476 0.127120 0.164000 0.038530 0.038530 0.399940 0.510540 -0.501730 -0.115740 -0.115740 -0.115740 -0.546230 -0.553070 3.656900 0.768880 0.683470 -0.475660 -1.292900 0.133620 -0.405280 -0.432680 0.228700 0.022259 0.713770 -0.911910 -0.973240 -0.464080 0.000000 0.020996 -0.232760 -0.204730 -0.482180 -0.522690 -1.041600 -0.332140 -0.585590 -0.482180 0.038530 -0.023703 -0.089332 -1.292900 0.505110 -0.521340 0.382550 -1.292900 -0.115740 1.259200 -0.568730 0.079880 0.768880 -0.936810 -0.602640 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.447 -0.233 -0.482 -0.395 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.447 -0.233 -0.482 -0.395 9.8552779 11.8108812 3.1048566 9.9341663 8.6967322 10.7774568 2.7263299 -1.1804953 8.2850142 7.4524431 3.4044127 5.3487990 5.3740379 10.0821300 8.9755310 3.4044127 9.1988264 9.9516263 9.0386164 10.1229433 9.6157674 8.2309590 8.5776713 4.0862318 9.6215603 9.3361330 6.1002187 -2.1804953 10.4745314 3.9487317 11.8390386 13.0714480 5.9943738 10.0273773 10.5066048 9.9351419 8.3032638 3.1413837 0.1414328 5.7020923 8.4651064 9.5892858 9.2921387 2.4633086 6.9165579 6.0142057 10.5522513 8.3262515 9.4909890 NA 10.8480447 4.3430098 3.6523373 8.8878366 6.8129243 7.8638418 9.4341578 10.6181222 8.7180492 -0.5955328 12.9564390 2.0673634 11.1405304 -0.5955328 6.8665717 4.8306762 8.4128391 9.0410351 9.4251219 6.9253562 8.1140687 11.6812133 10.9802648 10.6551036 12.8062677 10.9885900 9.3158024 11.4793323 12.6460460 9.4341578 9.3321883 8.1681762 -0.5955328 7.4230739 11.3374863 10.5714103 8.2351895 8.5843195 8.2675644 9.7612291 10.1839628 8.1481227 6.9968678 11.3126779 8.3692326 -0.5955328 7.5991675 10.1840614 10.5625993 10.5695268 8.9532323 8.0117405 13.3212540 8.9135255 7.6602256 11.4990380 10.2055798 9.2314883 10.5703642 9.1868628 1.9893570 8.9149504 7.7862128 8.8320726 11.0629195 5.7263381 10.4006815 8.5701547 8.4669064 12.8223508 10.6973071 10.4401259 13.2379594 9.8798061 9.2992282 3.5473635 TCGA-A8-A08J 52 1 1127 NA breast stage iv t4b n3 m1 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA 1 5 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 5.562279e-08 12.647720521 2.871587409 6.541437400 11.245045000 -0.587923061 10.026864780 -1.587706229 9.814634213 11.224131704 8.190232112 10.013461562 6.846782879 9.007412495 9.341413411 5.270136446 8.928839892 9.323547062 9.987221512 7.030540240 5.366350194 9.690604440 10.154043275 13.968960378 11.099968023 8.976304343 10.817030406 5.012068023 10.397285406 -0.002888279 -1.587706229 8.045150243 10.655329018 12.115158775 7.908010053 16.847560744 13.520720287 8.844696978 4.140075130 -0.587923061 5.760883582 8.770806256 7.150246896 7.478243804 12.870689771 0.734048403 9.726171658 13.834843961 0.412185359 9.825841107 11.197607483 7.564439906 8.203317656 2.871587409 14.561090086 9.658842167 0.734048403 8.563171480 NA 5.070367859 9.849907025 10.659489166 9.847825326 9.977733128 9.291738224 9.548505405 0.997111721 11.174121680 10.061860289 5.510186579 8.037863736 1.412131150 8.868509294 14.677879905 7.829078928 10.907760233 10.817030406 8.023179933 1.219524793 5.697556999 7.276341259 8.738584449 10.519045000 -1.587706229 6.445577739 8.148556913 9.155306265 11.088112041 9.360522304 6.213055602 5.389436027 10.902504529 11.569028099 4.389436027 14.282134322 5.778476691 6.939632102 10.627687995 13.747998912 12.537891315 7.861303449 10.353936231 10.920940161 10.553623535 10.456207571 4.752004577 9.405800952 11.748661565 10.663637441 NA 10.578631957 8.925882551 0.734048403 2.319039816 9.163698981 10.122961389 9.956636501 9.130687930 15.636081270 10.269747232 10.326913787 7.715935915 2.499629068 14.135655962 7.285599189 11.936206906 10.711363003 10.418130376 8.833167769 8.406508609 10.461448854 -0.36771000 0.39894000 0.45939000 0.41680000 0.17422000 -0.00277070 0.04939800 0.03589400 -0.50846000 -0.48418000 -0.14695000 2.35540000 0.32414000 -0.09973600 -0.51270000 3.36020000 -0.42189000 0.32728000 0.66069000 0.40541000 -0.03925800 -0.05926900 -0.24837000 3.65690000 3.65690000 -0.48932000 -0.01023200 -0.03667400 1.31130000 -0.51393000 -0.36771000 -0.02589300 0.41680000 -0.02931100 0.00000000 -0.00066427 0.00083195 0.03863000 -0.50846000 -0.54003000 -0.09485600 0.10772000 -1.05670000 -0.38625000 -0.38625000 -0.39022000 0.08419400 -0.09973600 -0.10513000 -0.51270000 -0.45045000 0.66069000 0.66069000 0.85878000 0.86731000 -0.03925800 -0.04926400 -0.00346270 -0.24837000 -0.44059000 -0.25431000 -0.48932000 -0.03667400 -0.13729000 -0.84010000 -0.51285000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.476 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.476 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 8.3100006 13.9311462 8.2000575 9.1195141 3.7882368 11.3484249 0.7340484 -0.5879231 8.7926159 7.8797603 NA 8.3165037 1.4121312 11.3670783 8.6313237 2.8044666 5.0120680 9.8050090 8.4982912 11.1548855 9.7050690 8.1177875 10.7044766 2.6600843 9.0396890 9.5485054 0.9971117 2.3190398 11.8958448 -0.5879231 11.9118763 12.0784900 7.3487928 10.0836960 10.7650261 9.5022673 6.5770617 1.8715677 -0.5879231 4.2947972 8.5141305 9.4694699 10.5375684 3.1670367 8.5817542 7.7430719 10.7230517 5.6409737 10.0254840 NA 9.8741459 2.3190398 2.9971117 9.2136693 5.5415396 6.2825195 8.7352097 8.6754243 8.2339288 1.7340918 13.6908948 0.4121854 11.2458358 -1.5877062 8.2902060 4.3190470 8.2701360 8.3779393 13.6683338 6.4400602 8.4442007 16.8475607 10.2940337 10.9996981 12.8706898 10.2102217 8.4205835 10.6935055 13.0715935 8.4275701 8.7385844 8.3546695 0.7340484 9.6130537 11.8294801 11.047420 8.601979 8.727304 8.969619 8.589574 10.128670 6.985802 8.402259 11.099968 6.650559 1.412131 7.915981 7.757494 10.407922 10.092954 8.893954 9.664229 10.027325 6.959049 9.847825 10.157829 10.889660 9.103899 10.683910 8.688279 2.499629 9.258711 8.616726 6.834219 11.088112 8.249783 10.247416 10.902505 7.000870 12.874402 10.231137 9.933755 12.031573 9.714794 10.004145 2.112600 TCGA-A8-A08L 89 1 304 NA breast stage iiia t3 n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 4 NA 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.203543e-06 1.24885e-06 12.3230683 5.8515267 8.4561720 10.5913633 NA 9.3799062 NA 9.5731522 11.7352446 5.9436448 8.8992802 8.0302329 8.3409120 9.3458443 6.5036032 9.2332364 10.6684756 11.1100543 7.1413940 5.4832837 10.8460670 10.1446324 14.8101117 10.5622957 9.1774133 11.3470747 7.2744695 11.4349959 -1.6560806 2.8031650 8.3066286 11.3276167 12.7178890 7.9230481 13.4303248 13.2726671 8.2935590 6.6291351 3.4311950 6.0716533 7.8275485 5.9211602 7.2202497 12.7410728 0.9287304 9.4710820 12.1738515 6.3324179 9.6189316 11.2022963 8.7720925 7.6924607 1.3437489 14.0595047 8.5598237 4.4311950 9.8445743 NA 4.5916615 10.2256111 10.4512765 8.8896621 11.4268793 10.9345534 9.7856391 3.2017123 11.4796020 9.6058273 8.7563025 7.5845236 12.3741410 10.9347872 14.5139901 8.6525378 10.7639559 11.2761318 8.7306726 2.6656656 4.2017123 9.2722509 9.5304658 11.1139834 -0.6563079 7.7783604 6.3210117 10.0081797 10.8517748 10.8265404 6.2385500 5.0161575 8.3799060 12.0472035 4.8355856 13.0011067 6.2263756 7.6221822 10.7231108 12.6338954 12.9929325 6.0441711 10.4215496 11.2073380 10.8980167 11.4915733 4.9584437 8.5737528 13.0782833 12.1034126 -1.6560806 10.0192485 9.3224429 3.3437347 5.1429484 10.2339967 8.7908157 10.7411397 8.5880962 15.0266859 10.4723713 9.6679131 8.3963004 3.8672936 14.8517593 9.5659237 12.6231980 11.8040604 10.3922193 10.1361161 7.9929887 10.7236441 -0.68915000 0.63810000 0.69167000 0.67845000 0.82060000 0.03693500 0.03284500 -0.02316300 1.35570000 0.03214000 0.03214000 0.86374000 0.67233000 -0.67122000 -0.68013000 0.02412700 -0.68579000 -0.68779000 0.72659000 0.64546000 0.05608500 0.45173000 -0.67499000 0.01321300 0.70082000 0.02525000 0.02525000 0.00097064 0.73057000 -0.00443120 -0.68915000 0.00000000 -0.69396000 -0.70316000 -0.71229000 0.03284500 -0.70388000 -0.01849000 0.71246000 0.62188000 -0.70729000 0.01819400 0.04613300 -0.69929000 0.04698400 0.04698400 0.04698400 -0.33399000 -0.34584000 -0.68013000 -0.68579000 0.03778200 -0.68906000 -0.68906000 -0.69812000 -0.67848000 -0.67407000 -0.67536000 -0.67499000 -0.65043000 0.01167100 -0.04807200 -0.69541000 -0.67536000 0.68012000 -0.00609040 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.000 0.000 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.000 0.000 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 8.7155090 12.4050193 2.0441843 9.7398020 3.6656656 12.6152684 3.9584437 NA 8.8983214 8.0319829 1.5136423 8.3521609 4.4311950 10.8535075 9.2979287 4.5916615 8.9602812 9.4165349 11.8703540 10.7681612 9.2260699 8.1970422 11.5111506 2.9578589 8.3238722 9.7856391 3.8672936 NA 10.6667872 3.3437347 11.7988028 12.5146746 7.4704368 10.5638084 8.0459049 9.1678958 6.5677340 2.6656656 -0.6563079 6.7783610 8.5713484 9.4820042 11.0929734 4.3881275 9.9709517 5.9875892 9.9455032 6.7531231 10.4205481 -0.6563079 10.7204005 3.6656656 2.7360420 9.8808441 6.7925925 4.2744704 9.7220272 8.8867644 6.7908163 1.9286925 13.3409119 2.5916555 11.1674977 -1.6560806 8.2339968 4.2506206 9.0690988 7.8983214 8.647890 8.204820 8.831573 13.430325 10.266688 11.320655 12.741073 9.938057 8.889662 10.205982 12.713466 7.879008 9.530466 9.294288 1.513642 8.192355 12.116666 11.879251 5.553185 8.143014 8.935255 9.115222 11.012602 7.163911 7.253625 10.562296 9.109433 NA 8.265573 8.629435 10.846813 11.126935 7.433845 10.141799 9.046771 6.859433 8.889662 9.925404 11.517253 10.021452 10.631156 8.761585 7.962118 8.593794 7.433474 6.226376 10.851775 6.030232 11.644371 8.379906 7.774707 12.592105 10.729864 10.169884 12.288445 11.988941 9.918799 2.431195 TCGA-A8-A08O 45 0 NA 943 breast stage iv t2 n3a m1 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 61.60.0 2 2 1 2 3 2 3 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 11.1115543 8.4847077 7.3658718 12.0759473 -1.2636116 10.9410860 0.3214664 10.3799201 11.9810273 11.4483969 9.8664418 7.1202192 9.3803710 8.6731529 8.6328473 8.5145918 10.6914381 9.8925979 7.4089402 2.3214664 10.9073788 9.1480258 13.4097687 11.7221789 9.1082916 10.6918014 4.1627820 10.7774894 -1.2636116 2.1959460 8.0196030 12.7297186 13.2323074 7.5630635 13.4013510 13.6345965 9.2610566 7.0984585 3.8658001 6.8239773 8.7166545 9.3082676 8.1732264 13.4557432 3.5438670 8.8900669 13.8994961 5.3512255 8.8358625 11.2094595 8.2522146 6.8292724 -0.2634384 12.9186197 9.4584683 3.4914042 8.3401412 NA 3.3803693 10.5650480 10.3530637 7.5851376 11.5207407 9.8696571 9.4273858 4.4369547 12.1085637 10.7620005 5.6191577 7.1459057 4.5178741 11.9108164 14.6257573 9.1556956 11.3767598 11.8783027 8.7080582 1.5438918 5.8450384 8.6037936 9.6107277 11.3962878 NA 6.5820050 7.5630635 9.8424233 11.3167734 5.7137948 4.4914042 5.0219150 10.2590964 12.1529165 3.9844435 13.6021514 5.6907104 7.7449435 12.6907111 12.2681400 12.7229791 7.7671820 10.7414375 11.4464602 10.9734767 11.5236012 5.4644363 8.9974344 11.9223194 11.8020992 -1.2636116 10.2536921 8.9288076 0.7364750 3.7419199 9.5526985 10.2678962 10.3158308 9.2223440 14.9187346 9.5843552 10.3373570 8.4796663 2.6433945 15.2733539 8.3785667 12.1036565 11.0184449 10.2482675 9.3785665 8.8039493 9.9952987 0.0212550 0.0212550 0.0212550 -0.3118400 -0.3104400 0.0251810 0.0232610 0.0326350 -0.7730700 0.7807100 0.0146810 0.0343260 0.0000000 0.0000000 0.0174760 0.0174760 0.0402570 0.0135640 0.0135640 -0.3616400 0.4423200 -0.3627800 -0.7690700 -0.0072632 0.3261600 -0.0374200 0.6968000 0.6968000 0.0219550 -0.3790400 0.0212550 0.0530250 -0.3118400 0.0104960 0.0251810 0.0270070 0.0270070 0.0326350 -0.7730700 -0.0218510 0.0812510 0.0773600 -0.3499000 -0.2452700 -0.2452700 -0.2452700 -0.2509700 0.0015547 1.8218000 0.0174760 -0.7605900 0.0135640 0.0128660 0.0050680 -0.7545600 -0.7664200 -0.3627800 -0.7646800 -1.2929000 -0.0072632 0.0392680 -0.7851400 0.6968000 -0.7671000 -0.3669700 -0.7736700 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 8.2659455 13.9247173 9.3195976 9.5796506 1.0085586 10.8391467 0.7364750 1.3214664 8.5080043 8.3640488 NA 8.5841361 0.7364750 10.3200677 9.0448539 2.4369613 8.0425765 8.9349599 8.0196030 9.8371772 10.0583415 8.8747865 10.5231929 0.6624790 9.4930711 9.4273858 4.5944948 0.3214664 10.5878735 2.5438670 11.8057967 11.4284764 7.9484029 9.7726884 7.7644211 9.8332299 4.1288295 -1.2636116 1.3214664 0.3214664 9.6914382 9.4972347 10.4269493 4.9653318 7.9837301 6.6731522 9.6598423 6.4089394 9.0896615 -1.2636116 10.3758555 3.1288378 3.8239735 9.7335603 5.5354714 4.7809085 8.4997271 7.2403401 6.6191577 NA 13.4525304 -1.2636116 10.2576245 NA 8.8463454 4.3512255 8.3006642 7.5566938 14.4954667 5.9064409 8.7080582 13.4013510 9.7222500 10.3717795 13.4557432 12.8881657 9.5005571 11.3070371 12.9337315 10.8677287 9.6107277 8.6598422 0.3214664 8.1585794 12.2331190 11.094891 7.461028 9.512125 9.329906 9.194922 10.782998 5.791798 7.606880 11.722179 5.543870 1.321466 7.137394 7.470343 12.088696 9.761654 8.767058 8.730868 13.239409 5.993903 7.585138 9.759576 11.929886 9.684152 10.709136 9.509654 NA 9.201326 6.659842 5.876065 11.316773 7.328972 10.112488 10.259096 7.457614 13.635730 10.930964 9.765802 12.644626 10.075251 9.835863 2.321466 TCGA-A8-A08P 70 0 NA 943 breast stage iiia t2 n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 7 3 1 NA 1 3 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.668684e-07 12.0166504 1.4929299 6.7888814 11.1666361 NA 10.5172966 NA 9.7058789 11.2485514 8.1202218 9.7134994 7.1854394 7.6251726 9.6178083 6.4734963 9.4471448 9.5605749 9.5758578 7.4702285 6.1531994 10.6610832 9.7737191 13.0957136 10.9195127 9.1774467 10.5279439 7.8729457 10.1347422 2.2705588 0.2705887 8.6059465 10.3289988 12.2474530 7.9733059 13.5127873 12.4927471 9.2554490 3.3294537 NA 5.4800098 8.1653738 8.0052658 6.6685872 12.2901467 1.8555114 10.3742809 12.0588665 5.8950457 10.2180614 11.5043754 6.7134992 6.8045350 NA 14.3847508 10.1839441 2.2705588 7.9168146 NA 4.2705588 9.5271579 10.6978688 9.6513777 10.5447400 9.5582684 9.4961651 NA 10.3442513 9.8907759 3.6397878 7.9756124 7.4929483 10.4392281 14.6432170 8.4129352 10.1306084 11.0628040 9.2724334 1.6855814 3.1450252 7.8122980 9.7114252 10.1993211 NA 5.1933893 6.7462899 9.8754181 10.9242968 6.4135145 7.1531994 5.6163312 10.2530743 11.8098764 4.7299877 13.5904162 5.9429813 7.6940221 10.9370759 13.0857391 12.6785318 8.4945576 10.6078062 10.7172947 9.9335210 10.5279439 4.6855926 8.6104059 13.0716581 9.6310373 0.2705887 10.4118117 9.1754415 0.2705887 1.6945682 9.8555185 8.6295734 10.2052297 9.1368045 15.4088678 10.2444925 10.1592992 8.4032699 3.0075185 15.0462691 6.2554497 12.1451532 10.8852659 9.3321523 8.9686818 9.2808510 10.0219048 -0.2368000 0.8413400 1.2103000 1.3603000 2.1951000 -0.0261670 0.4031400 0.3828700 2.5980000 -0.2223800 -0.2217000 3.1755000 1.0536000 0.3013800 -0.1658600 2.2850000 -0.2494600 0.6500100 0.4547900 -0.1129900 1.9660000 0.1613500 0.0459910 1.2641000 0.6226000 -0.3879500 0.0698550 0.0849320 3.6569000 -0.2167600 -0.2368000 -0.0053992 -0.2364300 0.0963800 -0.2879800 -0.0261670 -0.0261670 -0.0095426 -0.0346310 -0.0560220 0.6570000 -0.1290100 -0.1805500 -0.2267500 -0.2267500 -0.2267500 -0.1983700 0.3013800 -0.1849600 -0.1658600 -0.2494600 0.3933000 0.4547900 0.4547900 -0.1129900 -0.1468200 0.1613500 -0.2949700 0.0459910 0.4479800 0.0918800 -0.0554990 0.0698550 0.4963500 -0.3612500 0.0969610 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.000 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.000 8.9617179 13.3718752 NA 9.4579080 5.1450252 10.8187357 2.9335160 NA 8.5513268 7.5435748 NA 8.4015554 2.6856038 10.6632312 8.8213027 5.2554479 6.8097154 9.3606685 8.5544162 9.9269809 9.4746135 7.3113024 10.7892091 3.8555213 7.1653733 9.4961651 2.9335160 2.2705588 11.0738799 1.2705289 12.3708898 12.0804581 7.5834386 10.0508223 10.3007633 9.3527051 5.0431476 2.0075185 0.6856262 7.4832547 8.7757061 9.9364841 10.0917985 -0.3143738 7.8082145 7.7079616 10.5857055 6.0431454 9.9041567 NA 9.6214951 3.4404872 3.6855926 9.0040572 5.4024459 3.9709917 9.4808215 9.5357804 8.6628734 1.2705289 13.6198372 1.2705289 10.4404810 NA 7.6014729 3.6855926 7.7516826 8.3703422 13.562350 6.292923 8.259240 13.512787 9.821950 11.247120 12.290147 10.852384 8.743585 11.344474 12.842072 10.089138 9.711425 9.272433 -1.314374 7.775706 12.070107 10.6372424 6.2091550 8.4864936 9.0120230 9.3583723 9.5023213 7.7489885 5.2091570 10.9195127 5.7516833 1.6855814 6.6628734 7.3813439 9.8642583 10.4796031 7.8778865 8.5819259 10.7901922 7.4169123 9.6513777 10.2738396 10.9104996 9.0018751 10.2067032 8.6251726 NA 9.0099316 7.3315404 6.0779116 10.9242968 6.8704683 10.0805920 10.2530743 7.2554488 13.3443071 10.3289988 10.1316429 12.4787903 10.6115188 9.5017771 -0.3143738 TCGA-A8-A08R 52 0 NA 30 breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 6 0 0 0 0 0 0 0 0 0 3.989383e-06 1.21416e-06 12.6956026 5.0058356 6.5395202 11.8683125 -0.7083964 10.3090965 -0.1234339 9.3215694 11.8692569 7.0729515 9.2880655 8.4285829 8.4702570 9.7733915 9.1573252 8.7303839 8.5642219 10.3889658 9.0263016 4.3790525 9.4457772 12.3741569 13.2669922 9.7839459 10.2562939 10.5412981 7.0531428 11.5795799 6.1053722 0.8765661 9.0523121 10.5726527 12.3987273 6.4311432 13.3287099 12.7210641 8.7954176 5.0860067 2.3790664 8.7983953 8.7703616 11.4264996 8.2731592 6.7713719 -1.7083964 11.6506552 6.7551159 9.0892534 9.3448391 11.2512318 6.6314419 6.7874468 -0.1234339 14.0942624 9.8218959 2.8765464 9.7115522 NA 5.9989514 8.8896445 8.8989224 8.6924715 9.6219487 8.9426438 10.0439727 4.1244853 12.2636743 10.7836956 4.8614492 7.7136566 3.0989416 6.3250158 16.5086741 8.3618070 10.8557415 11.5662613 10.4010963 3.6491441 3.6839098 8.8480980 10.2508696 10.2609786 -0.7083964 5.5769937 6.6269822 9.8849831 10.5925165 5.6839098 7.5442574 5.2457885 10.2282300 11.8179690 NA 13.5884366 3.4615155 6.7874468 11.3780600 14.6189692 12.8355905 8.4615171 12.2862990 10.3010708 10.1795399 11.5749698 4.6491441 8.2074712 12.6709704 9.5677164 -1.7083964 10.0663790 9.7309035 5.1117700 4.1035732 10.6087219 9.0949159 10.0835688 9.6540839 14.8409706 12.1973551 10.6073077 7.7612341 3.5769937 13.0904688 4.8151553 12.8901680 11.1260631 9.4508327 10.0028288 8.1588707 10.2188255 -0.124730 0.577190 0.078438 0.045829 1.385100 0.144880 0.547350 0.770990 0.486130 0.118000 0.349250 2.530900 0.460070 -0.076145 -0.265640 1.055700 0.348760 0.116090 0.484230 0.022304 -0.039258 0.260430 -0.364990 1.112600 0.271900 2.512100 0.363790 0.025956 0.488710 -0.204230 -0.124730 -0.552160 -0.036308 0.226690 -0.640570 -0.483230 -1.013600 0.640850 0.486130 -0.185840 0.429570 1.159100 -0.442320 -0.549950 -0.549950 -0.177650 -0.190840 -0.076145 -0.260110 -0.398190 0.348760 0.116090 -0.229820 -0.229820 -0.051312 -0.039258 -0.048915 0.414290 -0.364990 0.068040 -0.397970 -0.351450 0.025956 0.495620 -0.251480 0.720180 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 1.462 1.462 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 1.462 1.462 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 9.128431 13.907825 1.992043 9.793927 4.750531 11.715102 2.876546 3.751024 8.552512 9.453354 5.717857 9.435804 6.400116 10.459951 10.251594 5.420876 7.832689 11.550894 6.216404 9.791936 9.769654 7.231171 11.918784 3.420873 9.561303 10.043973 2.198494 NA 10.872086 2.198494 12.378392 12.676241 7.386989 9.654632 9.980716 9.491264 3.846182 2.291604 NA 4.335983 7.638106 9.077862 8.411830 2.379066 8.195158 6.683910 9.659553 6.683910 10.619706 2.198494 14.059544 4.174239 3.783446 9.678344 6.616087 8.298619 9.200735 9.513783 9.472123 2.815145 13.420875 1.291604 10.692205 2.815145 9.839451 3.717857 8.778427 7.893363 13.550649 6.257377 7.799387 13.328710 9.733499 11.303693 6.771372 11.900309 9.084130 10.873960 12.932345 12.290535 10.250870 7.696733 4.198486 8.309792 11.660098 10.545439 4.481415 8.223807 8.480181 10.096933 9.454235 7.400116 5.510759 9.783946 6.850013 1.876566 8.482651 9.076791 12.809753 11.641564 8.315347 7.935448 8.955150 9.280277 8.692471 10.062669 12.418861 11.572363 10.289124 9.694071 NA 9.552506 7.481417 9.226757 10.592516 7.423449 10.157828 10.228230 8.014399 13.393978 10.263854 10.729084 12.947793 10.297217 9.224545 3.649144 TCGA-A8-A08S 71 0 NA 1004 breast stage iia t1c n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 5 1 1 NA NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.713281e-07 2.775223e-07 11.74927472 2.27461949 6.37335588 11.04875053 -0.04736823 10.60494179 1.95270631 10.22221058 11.69486335 8.33062786 10.27274268 7.26557754 8.57596613 9.72418384 8.71424552 8.97598664 8.99981824 8.47494906 6.74277156 4.87552452 9.39217894 9.24731495 13.54659112 12.10233558 8.57718521 10.61743780 4.57718710 10.47951948 1.53764396 3.27461949 7.09224550 9.30436980 12.69577553 7.95457148 15.39798940 13.49415395 8.53890864 6.41212607 3.17509340 4.76005058 8.76219432 12.39468741 7.33351587 14.18093678 4.84346635 9.00616756 14.38999122 5.39010015 9.37054684 11.39822653 6.67607132 7.96018906 -0.63218166 14.56912922 10.96950258 5.96764359 8.03661652 NA 3.53765639 9.88343158 10.67464787 6.23191811 10.73432722 10.10455643 9.44187331 2.76005058 11.61921422 10.00571507 6.41212607 8.49314533 2.45520226 9.62923912 14.46775755 8.39245610 11.18591448 12.03240129 7.85958510 0.68965699 3.12262303 8.40939094 9.18311502 12.27931101 0.36770654 5.22571452 7.13591651 10.28286429 11.30657623 5.74277156 5.45519569 4.53765639 10.11382615 11.62688653 3.17509340 13.85547763 6.80652384 7.14580888 10.65168829 12.33243365 12.60770317 8.44321087 10.87750677 11.02214404 10.96363025 11.05991135 5.34501308 8.58447776 11.54250145 9.94940318 -0.63218166 10.65342301 9.67550175 1.53764396 3.28278079 10.18271476 10.69892869 9.58992300 9.87849592 15.59555452 10.17065193 10.96834165 8.67720800 2.17507743 15.89055082 9.80652368 12.50936000 10.99868139 10.06034724 9.30657623 8.61565943 10.26814580 -0.7243900 0.1557700 0.1557700 0.0233640 -0.0056064 0.1754000 0.1481600 0.3938000 0.3601300 -0.7176400 1.4795000 1.4795000 0.0000000 0.0000000 0.1575100 3.6569000 -0.7186200 0.4429100 0.4191800 -0.3382500 0.9474400 -0.0725410 0.6485600 3.6569000 0.1866200 -0.1942500 -0.2155700 -0.2155700 0.4380100 -0.6877000 -0.7243900 -0.2501900 0.0252500 0.3071300 0.1754000 0.0431080 0.0451410 0.3938000 0.3601300 0.3601300 -0.5427000 -0.5445800 -0.7372000 -0.1042100 -0.1042100 -0.1042100 -0.0679900 0.0000000 0.0000000 0.1901000 -0.7186200 0.4429100 0.4975300 0.4975300 -0.3382500 0.9963400 -0.0725410 -0.6969400 -1.2929000 0.1866200 -0.0319020 -0.1942500 -0.2155700 0.3972800 -0.2509200 -0.2088300 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 0.054 0.710 0.000 0.000 -0.216 -0.216 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 0.054 0.710 0.000 0.000 -0.216 -0.216 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 7.66922807 12.83947049 7.75359451 10.01878354 3.48043317 10.83533735 0.36770654 NA 7.92615246 7.42301419 NA 7.12261889 1.95270631 10.18671336 8.99344057 1.82716865 6.16214759 9.12678783 9.23655432 10.63217441 9.03657257 7.91076384 10.21008209 0.68965699 7.33062741 9.44187331 2.36773449 -1.63218166 11.09501414 2.82716865 11.57321962 11.20831302 7.45254025 10.61980584 10.78795519 9.18950585 5.60613719 0.95270631 -0.04736823 6.72528445 8.43651001 9.83329825 9.72308290 2.17507743 6.72484396 6.31609867 9.73569242 7.38454029 9.36067022 NA 11.09968714 1.82716865 4.09565442 9.08918138 4.60766173 0.95270631 9.66579442 7.75574885 6.88343143 0.36770654 13.52357776 -1.63218166 10.47560273 -0.04736823 6.33927459 4.34501308 8.31901632 9.54639657 15.5687644 6.0115873 8.3131755 15.3979894 9.9657843 10.4250467 14.1809368 11.9505794 8.3873225 11.4085352 13.1184911 9.0286192 9.1831150 8.1226194 0.3677065 7.5376572 11.0992630 11.192691 7.171862 8.214789 9.465106 9.044570 10.236331 5.883433 3.689657 12.102336 5.967644 -1.632182 4.859587 7.656298 10.146220 9.752515 9.732862 9.320473 12.523103 4.321928 6.231918 11.601801 12.110041 9.528864 10.637735 8.571080 10.312810 8.522170 7.702385 3.615663 11.306576 6.657750 10.148682 10.113826 6.982441 12.688603 9.520017 9.800274 13.056201 9.436510 9.680048 2.175077 TCGA-A8-A08T 64 0 NA 2830 breast stage iv t2 n1a m1 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 2 2 NA 2 1 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.366378e-07 3.469029e-07 11.228218465 5.888368221 7.401319861 11.349640945 -1.587272661 11.138853177 NA 10.024121009 11.844002014 9.258908942 9.833121586 7.765782025 8.490785909 9.325524260 7.741309899 8.143954056 10.442957280 8.448808468 6.822026471 -0.587272661 10.344849796 9.878711396 13.422944560 11.412458862 9.668843688 10.397409491 4.641453546 10.711553928 0.997617587 1.582556003 8.198904666 10.767986106 12.735760166 8.169191445 13.002344674 13.302186497 9.576284604 5.716414798 2.412646055 7.355149325 9.065479954 10.283384967 6.800652744 13.100830676 3.872070284 9.279913712 13.809574206 8.137148954 9.220987928 10.928334862 7.126880992 6.473330722 NA 12.604207849 9.781687070 4.435001779 8.264383953 NA 3.967223953 9.819371529 10.417908619 10.019040231 10.788217503 10.181232901 9.637842423 1.412618959 11.693695680 10.164179112 6.147345371 8.142255660 5.912479816 10.696880788 15.178956858 7.249032840 11.706968551 11.539178154 8.908489898 2.113067014 5.041992001 9.146497653 9.239977709 9.867962236 -0.002454669 6.720973375 6.756931208 9.784955899 11.018808848 5.140553728 5.193996408 4.872065357 10.262040097 11.882658294 0.997617587 13.621021804 5.670021678 5.813514428 10.846220466 13.457712066 12.736534186 7.796339476 10.282999774 11.532062534 11.593516991 11.147767899 5.207049472 8.154102152 12.307358051 11.928334862 -0.002454669 10.051975772 9.055589111 2.319531231 3.419835490 10.459417991 11.479228793 10.232015764 9.106992871 14.713184194 10.326646325 12.101103883 8.276821384 2.500088176 15.390216804 6.655808324 12.199210940 12.051410272 10.032854897 9.523770700 7.902483049 10.716977780 0.9069400 1.4946000 1.5734000 -0.0167040 -0.0391710 0.7218800 -0.0283550 -0.0124380 -0.0441440 3.6569000 0.0881130 3.5151000 0.0119580 0.0322810 -0.0042929 0.0019418 0.0019418 -0.0175290 -0.0173910 -0.0521260 -0.0339130 0.0471260 0.0461330 0.0461330 0.0461330 0.0603650 0.0603650 0.0490810 0.0555150 0.0270760 -0.0350460 -0.0255430 -0.0391710 0.8036400 0.7047600 -0.8598300 -0.0676250 0.0181950 -0.0441440 -0.0441440 0.0791590 -0.0125760 -0.8380600 -0.0274220 -0.0274220 0.0150280 0.0150280 0.0322810 0.0827650 -0.0042929 0.0019418 -0.0175290 -0.0173910 -0.0173910 -0.0521260 0.0120970 0.0296060 -0.7194200 0.0461330 0.0461330 0.6860800 0.0603650 0.0603650 0.0555150 -0.0042929 0.0869560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.218 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.218 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 8.3682851 12.5860779 7.7141315 8.8648764 2.4420942 10.5897431 1.5825560 NA 8.4800692 8.9891194 NA 10.0823572 2.7345687 9.9824907 9.3059366 2.6605636 8.1354425 9.4887825 10.0241210 9.7038057 9.7685201 7.9653041 10.3769759 1.5825560 10.3558824 9.6378424 3.1130670 NA 10.6954339 3.6605636 13.1064486 11.7102678 6.8346998 10.4304874 6.5623829 9.2455251 3.7345579 0.7345687 0.7345687 4.2952749 9.2431502 9.2478960 10.5044009 3.7701842 7.6624832 6.3956284 10.9715340 8.1165384 9.7811415 -0.5872727 11.3021390 3.1130670 4.0564882 9.6788534 5.7871529 4.6794238 8.4055734 7.9975973 7.0456297 0.7345687 14.1672616 NA 10.2690605 NA 9.0153339 3.9672240 8.1026329 9.2518388 13.633303 4.716415 9.182473 13.002345 10.222403 11.187216 13.100831 12.758733 9.098260 10.990064 13.089804 11.940601 9.239978 9.431531 -1.587273 6.993835 11.734563 11.109820 6.140556 9.230418 9.758595 8.145650 10.844892 6.207051 7.569982 11.412459 6.765781 2.997600 7.651039 5.745253 12.798767 10.844133 8.563791 8.394202 12.237295 5.967224 10.019040 10.131168 12.126666 9.879221 10.356615 9.189068 -1.587273 8.864650 6.940112 5.990063 11.018809 6.536757 10.486107 10.262040 7.904568 14.588068 10.093873 10.403448 12.622088 10.439158 10.477041 1.412619 TCGA-A8-A08X 42 0 NA 1308 breast stage iiic t4d n3a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 4 3 4 NA 1 5 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.503025e-07 1.112456e-07 11.9609133 2.8493388 6.3087740 11.3930192 0.2643563 10.2090924 NA 9.4980001 11.5772633 7.2010182 9.8035391 6.9297164 8.1500768 10.9730332 7.2587337 9.1862212 9.8285299 9.5543991 8.4115851 4.7238097 10.1122207 12.1401297 12.7800802 9.9438604 9.5217683 10.5868719 7.7761329 11.0461498 -0.7355236 4.2643788 9.4677284 10.9068834 13.0073213 7.8151271 17.2886002 11.7607348 10.3787734 6.7562334 3.7879443 6.4343046 8.8809291 8.0813641 7.3624120 11.3104812 NA 14.0033698 9.4380574 8.3115045 10.2980511 11.3441984 7.2010182 5.0972695 1.5863084 13.8782607 9.6307025 1.2643563 8.7977102 0.2643563 8.5497827 9.6609851 10.1477874 9.3663561 9.6459234 9.9871878 10.2010182 1.2643563 11.1496954 10.0555433 5.6042315 7.8568376 2.5863084 8.0058474 15.7694631 8.0864733 11.2654366 10.3742109 8.8882620 3.8493388 2.0717284 7.2416600 9.4280299 11.3797492 NA 6.6131087 7.5405047 10.9940011 10.8001417 6.7957618 7.2587337 5.4141288 10.5364268 11.6548181 NA 14.0059000 3.1712709 7.5681613 11.8192090 14.7444763 12.4064874 7.3465297 11.2236578 11.0817638 10.3026409 11.4780921 4.7238097 7.5952970 11.3043275 9.0342182 0.2643563 10.4274010 9.8698598 2.5863084 4.1268325 10.0391675 11.8587050 9.8035391 9.2643804 14.9501147 10.3564767 9.7227870 7.3250760 5.1470217 14.5094502 10.4374328 13.2810146 11.2964261 10.2452339 9.8827659 8.7031724 10.4654873 -0.152220 0.629780 0.661800 0.172610 0.335130 0.067948 0.260590 0.467410 0.038630 -0.477020 -0.477020 0.872090 0.455640 -0.111160 -0.136520 -0.136520 -0.136520 -0.256840 -0.123000 -0.479130 0.105550 -0.265400 0.285960 3.656900 0.020903 0.143250 0.143250 0.143250 0.264510 -0.149820 -0.152220 -0.150190 0.086171 -0.474590 -0.295440 -0.327740 -0.327740 -0.203980 0.038630 0.038630 0.120930 -0.189990 -0.477020 0.627150 0.627150 -0.266850 0.130070 -0.111160 -0.111160 -0.318400 -0.136520 -0.256840 -0.123000 -0.162080 0.284690 0.061126 -0.265400 -0.406410 -0.178660 -0.287500 0.127410 0.143250 0.143250 0.054945 0.205340 0.028341 0.322 -0.111 -0.137 -0.137 -0.257 -0.123 -0.479 0.000 -0.265 -0.151 -0.274 -0.288 -0.288 0.127 0.127 0.143 0.143 0.516 0.659 0.000 0.210 0.205 0.000 0.000 0.000 0.000 0.000 -0.475 -0.295 -0.067 -0.328 0.000 0.000 0.121 0.121 -0.171 0.306 0.566 -0.267 0.000 0.322 -0.111 -0.137 -0.137 -0.257 -0.123 -0.479 0.000 -0.265 -0.151 -0.274 -0.288 -0.288 0.127 0.127 0.143 0.143 0.516 0.659 0.000 0.210 0.205 0.000 0.000 0.000 0.000 0.000 -0.475 -0.295 -0.067 -0.328 0.000 0.000 0.121 0.121 -0.171 0.306 0.566 -0.267 0.000 10.2243823 14.6877261 5.1223621 9.7217612 4.2643788 11.5355515 0.8493588 4.2185797 8.7360555 9.5567020 NA 8.4354319 8.9973957 10.2359239 9.2784009 2.2643863 8.0652804 9.5051716 9.0092142 10.1690150 7.9618693 7.7602356 11.1055515 2.8324040 7.2127473 10.2010182 0.8493588 -0.7355236 10.9999364 2.8493388 13.7441606 12.5352597 7.8864319 10.1378245 8.4689514 9.8919143 3.7238097 3.5123027 NA -0.7355236 8.9332655 10.6822328 9.6263241 2.7238206 9.1676296 7.7319856 9.9648201 5.6219317 9.0125731 2.0717284 12.6667263 4.1223580 4.0717369 9.4239237 7.2255410 10.2002820 9.5170457 8.9208051 12.1069271 6.3624120 13.7766887 NA 10.4805199 1.2643563 8.8973757 5.0192660 8.3465292 8.6737712 11.499380 7.731986 8.990598 17.288600 9.808987 11.157303 11.310481 9.686445 8.807412 10.216394 13.128470 11.641591 9.428030 7.982057 1.849359 7.454205 12.127018 11.402972 5.493199 8.879090 9.105158 8.750210 10.237403 7.177270 6.740114 9.943860 6.230165 NA 7.281188 6.865706 12.605482 10.998667 8.789901 7.795762 9.388502 11.206162 9.366356 10.473834 11.179886 12.688678 11.018015 9.147023 8.035870 9.336794 7.418946 10.708360 10.800142 8.628515 12.047379 10.536427 7.613109 14.118664 10.245948 9.798683 11.995487 11.540505 11.138978 5.834236 TCGA-A8-A08Z 76 0 NA 1217 breast stage iiib t4b n3a m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 1 2 2 NA 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.946798e-07 11.15173358 6.16594409 7.22063371 10.92398487 -0.03047188 11.01234554 -1.61528704 10.36007342 11.82584202 11.44595488 9.98496125 7.46939192 8.25340646 9.75581577 6.83166700 9.06494319 10.31605996 9.94920953 8.49962747 1.70650845 10.81921192 9.97610611 11.89126318 10.07370805 9.81764740 10.39441232 5.50352365 10.86862867 -0.61550806 6.21747308 9.52924196 12.00697876 12.61812849 8.57440809 12.61955077 12.40078262 10.30344697 4.61340199 -0.03047188 7.26110106 8.74433335 8.97048529 8.37326844 12.37451033 3.02844539 10.26951735 13.30944259 5.47204580 9.43074587 10.74817096 6.30344652 5.01394010 NA 13.86658237 10.20356519 2.55451518 8.09366739 -0.03047188 4.98449821 10.03204214 9.95158911 9.78919306 10.98379916 10.10867120 9.59403716 0.38460246 11.91132745 10.15607321 6.46673315 8.67460259 5.96201219 10.64079235 15.37275800 9.11112550 11.82428476 11.55872917 9.22142303 3.93917015 0.70655265 9.68493618 9.60375225 10.85422549 NA 7.49832587 7.09538964 10.51128815 11.42127249 6.96578428 7.07807073 6.92374226 10.64755943 12.01302925 -0.61550806 13.72345934 6.53433090 7.89633664 12.01291532 13.33937071 13.11415135 7.96766664 10.25263457 11.25031695 11.01173225 11.38511196 5.49310930 8.29597551 12.24246752 11.06164263 2.47204580 10.43749128 9.17248627 1.96952812 3.81185118 9.63428977 10.70510221 10.54413972 9.22771966 14.67607819 10.17003620 9.85524256 8.49441441 4.40695157 14.05280390 6.68379188 13.28945348 11.92240876 9.91499004 9.63251125 8.62537498 10.57476021 -0.00152430 1.10350000 1.11230000 0.00708260 -0.00636680 0.00485790 -0.01170300 -0.00241290 -0.00241290 0.85146000 0.85146000 0.01377200 0.01460900 0.01460900 0.01433000 0.01433000 0.01433000 -0.60352000 0.01656800 -0.01491600 -0.00609040 0.01289100 0.00624810 0.00624810 0.00624810 0.00332990 0.00332990 0.00332990 0.02188400 0.03439500 -0.00152430 -0.00912860 0.00708260 0.00485790 -0.00843850 -0.01170300 -0.01170300 0.02553100 -0.00241290 -0.00241290 -0.00857660 0.00291330 -0.61652000 -0.00221680 -1.17640000 0.01488800 0.01488800 0.01460900 0.01460900 0.01433000 0.01433000 -0.60352000 0.01656800 0.03679400 -0.01491600 -0.00152430 0.00589500 -0.59400000 0.00624810 0.00624810 -0.00069303 -0.00930140 0.00332990 0.02188400 0.00527490 -0.59273000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.38246883 14.17689105 8.73552285 9.89534792 3.42897314 10.28733561 -0.61550806 NA 8.20954256 8.35612708 -0.03047188 9.65429482 2.08501667 10.15813502 9.27332706 1.55449062 8.24100927 9.46806294 10.05568238 9.46473503 9.44322496 7.91206060 11.13256682 3.99929651 6.72887966 9.59403716 1.70650845 NA 10.50999713 2.38457483 12.73773053 12.06911319 7.78972534 9.96766649 8.33295090 8.95538808 5.60375095 2.47204580 -0.03047188 10.41421599 8.18871494 8.94968579 8.82233565 3.33878094 7.67404958 6.13947154 10.37539680 7.18224536 9.44999977 NA 11.45956138 4.87643836 3.47204580 9.65950344 7.12581432 1.70650845 9.85828940 9.31310206 5.02844097 NA 13.70904556 -0.61550806 10.03024213 NA 8.25956486 4.24256440 7.93533068 8.63724905 11.9940984 5.0850252 8.1659436 12.6195508 10.0565670 11.0100642 12.3745103 11.9861224 9.2087470 10.5557605 13.4969418 10.7104513 9.6037523 8.2503169 0.7065527 7.4425753 11.4425754 11.392312 7.204763 9.015761 9.032941 8.712136 10.714055 7.384583 4.554509 10.073708 6.390209 3.594035 5.632513 6.993172 13.626120 10.590377 8.971423 8.618203 11.817256 4.632513 9.789193 10.278264 11.452858 10.095390 10.535600 9.889899 NA 9.502090 8.493147 4.165944 11.421272 9.014851 10.405997 10.647559 7.915965 14.017494 10.075891 10.398953 12.937013 10.775021 10.084590 1.191942 TCGA-A8-A090 74 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.946798e-07 11.1461888 5.5333951 5.6569711 11.2694808 1.7608171 10.4253517 NA 10.5048920 11.7077119 11.4436052 9.9285025 7.2275052 9.0108408 8.7794695 8.1945072 9.0595048 9.8808995 9.6229263 7.2019053 2.2913089 10.1995975 9.6146349 12.5361416 10.4122561 9.9933599 10.2446214 5.6994045 11.0338190 -0.4090866 -1.4092782 8.5494335 10.8823392 12.5240180 6.7201635 13.5270125 13.3597369 9.4673977 5.7608064 2.3982409 9.0410609 8.1777205 8.4962678 7.3689578 12.9848743 0.9128031 9.6690316 13.6118606 1.7608171 9.0777157 11.3134748 8.1358452 7.3390732 -0.4090866 13.8890739 9.6542757 5.0503101 7.6187863 -1.4092782 3.6783424 9.6049012 10.9321215 10.2161329 9.8803232 9.3607185 9.3482707 4.8196988 11.4672057 10.0076782 5.2913199 7.8670050 -0.4090866 11.0544050 14.4820710 8.8567536 11.3561668 11.6630133 10.1392210 0.1758120 3.5450788 7.7978949 9.8268948 11.1866044 -1.4092782 5.0986764 7.3656680 9.5428937 11.2019054 4.1758439 7.1569345 5.8482674 10.0307115 11.3687524 0.9128031 13.7494509 6.1377761 7.2808784 12.3936999 12.6844633 13.0242053 8.0129452 10.4570005 10.7220945 10.5397042 11.1384982 4.8576675 8.1493015 12.1105169 10.4589315 NA 10.5000237 9.3795991 -1.4092782 3.2376249 9.3153946 9.4917475 9.9954900 8.7880974 15.3453767 10.3808217 10.5308271 8.4348017 0.5909134 14.4515312 5.8100497 11.8377697 10.5289900 9.7707897 8.5936955 8.5908808 11.4330856 -0.3270400 1.8836000 0.0276380 0.0000000 0.0000000 0.0066653 0.0249690 0.0256710 -0.7216300 0.5187400 0.5187400 0.4946100 0.0100060 0.0041632 0.0125160 0.0125160 0.0125160 0.0086135 0.0086135 -0.7214300 -0.6927800 -0.1557900 0.3531600 0.3531600 0.3531600 -0.0235660 -0.0235660 -0.0272610 0.3427500 -0.3336500 -0.3270400 0.0027745 0.0000000 0.0066653 0.0066653 0.0249690 0.0249690 0.0256710 -0.7144400 -0.7216300 -0.0069519 0.0000000 0.5187400 -0.6997800 -0.6911500 -0.6911500 -0.6911500 0.0041632 0.0041632 0.0125160 0.0125160 0.0086135 0.0086135 0.0143300 -0.7046900 -0.6927800 -0.1557900 -0.6803100 -0.6583600 0.3531600 -0.3234400 -0.0235660 -0.0272610 -0.3377900 0.0120970 -0.3536200 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.531 -0.149 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.531 -0.149 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 8.1493015 13.4766247 6.7507525 9.2765055 2.8425967 10.3111249 0.9128031 -1.4092782 8.2019053 7.2947843 NA 7.2164801 4.8576675 10.6256796 9.5566649 4.1144420 6.7201635 8.4046618 9.4788628 11.1178688 9.3715434 7.8946614 10.5505205 3.5450788 9.1377750 9.3482707 3.9484326 NA 10.8196993 2.3982409 12.1199451 11.8219518 7.5245715 10.4573868 9.7595528 9.1578860 3.3457654 -0.4090866 1.1758120 6.9128091 9.3136882 9.3247433 9.8262966 3.4977656 8.6082877 6.9615678 9.7905530 5.6461627 10.1193348 -0.4090866 11.5620649 3.1758439 3.0503101 10.0386923 6.1189826 3.8003305 9.4727593 8.8124677 5.2202371 1.7608171 13.1484042 0.1758120 10.2115587 -1.4092782 9.5624243 3.8003305 8.1026335 8.7633083 14.3674437 6.9440280 8.9082932 13.5270125 9.3763331 10.4716121 12.9848743 13.3896056 9.1290697 10.9716122 13.8805394 10.7114426 9.8268948 8.0847361 -0.4090866 7.3188013 12.0700293 10.433624 8.177721 8.794229 9.042092 10.224330 8.918590 7.401452 6.843545 10.412256 6.160737 -1.409278 6.515694 7.885341 10.854737 9.631170 8.828091 8.800334 13.068576 5.175844 10.216133 9.698752 9.367314 9.679006 10.087734 9.487970 0.175812 9.175956 6.227506 4.568160 11.201905 6.730432 9.637323 10.030712 7.328973 12.754294 10.110517 10.567803 13.588325 9.805807 9.095700 1.175812 TCGA-A8-A091 61 0 NA 1004 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 5 NA 2 4 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.946798e-07 11.0029148 6.8614480 7.1545397 11.9502498 0.7770304 11.4085857 NA 10.3252903 12.1855002 7.2481135 9.9640173 8.1092153 10.3854057 9.4590102 9.5276062 7.5658538 11.0254547 9.1687228 6.6770233 0.7770304 10.3708101 10.2128379 13.4124455 12.4617675 8.9710722 10.4632692 5.0781871 10.2261616 0.7770304 1.1396005 8.7978003 11.8126035 12.8609255 7.8810558 12.9689593 14.0139086 7.9878643 5.6975848 2.2916036 5.6062882 8.5944593 4.9583509 6.6026588 13.7017253 0.5546380 10.0696691 14.8515187 2.6135317 9.0246887 11.9119952 7.6544126 8.4893001 -0.4453620 13.1578304 9.0577895 1.8765661 10.0222320 7.0624207 5.6491441 10.2167014 10.0068677 10.3197744 11.2005850 10.3718766 9.8888997 8.0195123 12.7174373 10.2890538 6.6804706 7.4655191 3.2915888 10.9578160 15.1314552 8.3020476 12.2038078 11.9404888 6.8855439 1.5546380 6.7245521 8.1295355 9.4893003 10.6931116 -0.4453620 6.4932262 7.5029933 10.4647694 10.7561378 7.8915049 5.0030850 5.0249446 10.4126074 11.8194599 3.9238623 13.3025397 5.3790560 8.1924590 11.0902258 9.8257003 12.8870826 8.0072106 9.8190691 11.1216318 11.2904476 11.7967088 6.0464801 7.9794926 12.0543893 13.4146464 -2.0303245 10.1279580 9.6583513 1.2916036 3.2944737 10.8720390 10.1383361 10.3956665 8.8307510 14.6247334 10.6283217 10.9064858 8.5126958 2.3619929 16.3596817 6.5583779 10.9937647 10.7287198 10.6012958 9.7345355 8.3050544 10.4864892 -0.00830230 -0.00830230 -0.00553750 0.22762000 0.21823000 0.49165000 -0.05366500 -0.01560400 -0.01560400 3.65690000 3.65690000 1.47110000 -0.00968060 -0.00968060 0.49580000 3.65690000 -0.55897000 -0.00761010 -0.00692580 0.48069000 0.50361000 0.00000000 0.01056400 0.01056400 0.00138510 0.00175060 0.00175060 0.01614600 3.65690000 0.00041593 -0.00830230 -0.00830050 0.22762000 0.49165000 0.49165000 -0.02274400 -0.02274400 -0.01560400 -0.01560400 -0.01560400 -0.56366000 0.49909000 -0.56892000 -0.01147300 -0.01147300 -0.01147300 -0.01147300 -0.00968060 -0.00968060 0.49580000 -0.55897000 -0.00761010 -0.00692580 -0.00692580 0.48069000 0.50361000 0.00000000 -0.58316000 0.01056400 0.01056400 0.48096000 0.00175060 0.01614600 -0.01711600 0.49510000 0.51089000 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.929 -0.579 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.218 0.281 -0.569 3.657 0.000 0.000 0.172 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.929 -0.579 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.218 0.281 -0.569 3.657 0.000 0.000 0.172 8.4912643 12.0114942 6.1495724 10.0696691 3.7510245 12.0505647 1.9696755 NA 8.3095141 9.0963683 -2.0303245 7.2215011 1.2916036 9.6774543 9.2591065 1.1396005 8.0085827 9.8911330 11.3410322 10.0703263 10.2373694 8.4249914 11.2972166 3.9696663 11.2298484 9.8888997 2.4932374 -0.4453620 11.3403514 4.1594919 11.6036808 11.3194980 8.0438054 10.3748054 6.9296656 8.8944764 6.0518136 4.2550626 0.9696755 -1.0303245 8.4814164 9.6809006 10.5433111 4.4932246 8.6792563 6.6873407 10.4799336 7.6544126 9.5667853 NA 9.1002345 4.6278753 4.9121804 10.0364359 5.6038222 4.5843733 8.9303899 8.5880493 6.7312158 0.7770304 13.8166478 1.2916036 10.2425852 NA 7.1320555 6.2411270 8.1557781 6.6385489 16.258641 4.255063 8.923133 12.968959 10.181248 9.576069 13.701725 13.064855 8.545581 11.212689 12.353098 9.323913 9.489300 7.700983 2.724541 7.171787 12.663478 10.9294848 8.6008410 8.6126183 10.1800308 8.7665147 11.0086498 6.8088677 8.8545976 12.4617675 6.3662680 0.2916036 9.2417105 6.5826057 11.9999862 10.3737411 9.1213146 8.4833914 12.1116912 6.2915925 10.3197744 10.2140278 12.1427945 9.9798423 10.3103485 9.1168690 -1.0303245 8.6182464 6.8759827 5.9808913 10.7561378 7.4146785 11.4824044 10.4126074 7.7428362 13.5477712 9.8450293 9.5418904 12.1044913 10.0027427 10.3584885 1.6701152 TCGA-A8-A092 48 0 NA 942 breast stage iiia t2 n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA NA NA 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.640872e-06 3.337367e-07 11.9021343 3.3644183 6.3331661 11.7605322 NA 9.9587947 -0.7648857 10.0449018 11.7076976 8.5783195 9.9251317 7.1805775 8.7954666 9.5263044 7.2009182 8.3186129 9.6519312 9.2393541 6.9355729 2.2351450 9.4224857 9.8382965 13.6894651 9.4144208 9.5976256 10.6702830 4.9766019 10.8676723 -1.7646406 1.4050666 7.5502835 10.5377727 12.2496773 8.4200090 13.5445035 13.0986425 8.9022452 4.4639494 1.5570424 5.7973762 8.3746852 10.1603172 6.8681287 13.2715649 2.5570669 9.0759118 13.2597540 6.9040192 9.3211770 12.0675293 7.3669909 3.9630579 1.2351143 13.3624828 9.2372456 0.2351143 8.3950049 -0.1798415 3.4445876 9.7742926 10.9002475 9.4372575 10.8392236 9.7983300 9.6702830 0.8200768 11.4601905 10.4012968 5.3746848 7.4224862 5.1054979 10.1074239 14.6413886 8.2351900 11.1781979 11.9796522 7.5042605 2.0425043 1.5570424 8.6413387 9.3727654 10.7481210 NA 4.6613962 7.4445867 10.2606193 11.1284352 8.7528031 6.0993205 5.1539958 10.1618004 11.9463705 2.3225916 13.7286139 5.7897214 7.4543026 12.0988360 12.9293283 12.2811493 7.8933452 10.8669929 10.5306157 10.1654792 10.9935652 5.4543009 8.5170638 12.6154595 12.0690121 NA 10.1215924 10.6344117 0.5570914 3.2319699 9.7834740 11.1320337 9.8906645 9.8257208 14.9307291 10.5228461 11.5122758 8.2081134 1.4050666 16.1705232 8.9749144 12.5906913 12.3283862 10.4400105 8.6434634 9.0008341 10.8637820 0.7410000 1.4776000 1.4776000 0.0000000 0.4533000 -0.1522100 0.0189430 0.4331100 -0.0128340 -0.9880800 3.0079000 3.5301000 0.4723800 0.4723800 0.0111210 0.0111210 0.0111210 0.4007700 0.3785800 -0.4626900 0.3875000 -0.4578400 -0.4915200 0.9467000 0.9467000 0.0575110 0.8153200 0.4780400 0.8627500 -0.4528600 -0.4416700 -0.4322500 0.0000000 -0.1587300 -0.1522100 0.0189430 0.0189430 0.4331100 -0.0128340 -0.0092666 -0.1929500 -0.1329000 -0.9880800 -0.0679930 -0.0705070 -0.0705070 -0.0654470 0.4723800 0.4723800 0.0111210 0.0111210 0.4007700 0.3785800 0.3697400 -0.4626900 0.3875000 -0.4491100 -0.4717400 -0.4915200 0.9467000 -0.4624900 -0.5309300 0.4780400 0.8627500 0.4508800 -0.0062286 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 7.7973762 12.6858295 9.6041857 9.3311899 2.3276874 10.5937849 -0.1798415 NA 8.6676757 7.4901626 NA 7.6925144 2.2351450 10.3049192 9.4506667 1.9355729 6.0424889 10.3176154 9.7374683 11.0917538 9.2403091 8.2252378 9.6624466 2.0425043 9.9159327 9.6702830 3.7269838 NA 11.3987834 -0.7648857 12.5600877 12.0514174 6.9251319 9.8617554 9.2575015 10.0911701 7.8717580 -0.1798415 NA 6.1299506 8.3225965 9.0303617 10.7342322 1.6945682 8.4223991 8.2808932 10.0919482 7.2181273 10.1936864 -1.7646406 10.3836103 2.4050666 2.9900291 9.2569257 5.2931240 1.0425043 8.0977709 8.2519420 5.3436565 3.0931207 13.6802456 -0.1798415 10.1035704 NA 8.9013578 2.5570669 8.2602732 8.1223544 12.159833 7.657198 8.082191 13.544503 9.255030 11.203980 13.271565 11.357638 9.020586 11.130898 12.905845 11.985841 9.372765 9.168824 3.093121 8.759676 12.064856 11.1054984 6.0931143 8.3772409 9.3132846 11.0471104 10.5373670 6.0230357 7.2066774 9.4144208 5.6529855 1.5570424 6.9528100 9.3257028 11.4031790 9.5727555 9.5548058 8.9390373 11.7550157 4.1658718 9.4372575 10.4442824 10.8789899 9.1695618 10.8399186 9.1606880 NA 9.1970174 6.4150420 2.9355729 11.1284352 6.8498442 9.9626288 10.1618004 7.5948829 13.2954919 9.9394698 10.1673485 13.2529860 10.2767929 9.7017201 -0.7648857 TCGA-A8-A093 61 0 NA 546 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 3 NA NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.497701e-06 6.938058e-07 11.00536370 7.25563386 7.54064030 11.49589949 -1.61175535 10.08140674 NA 10.30274058 12.05635399 10.91998060 9.61296007 6.30124559 9.34980513 8.57323098 7.48375210 9.00030231 10.69612548 9.34473154 6.34255119 -1.61175535 10.20653810 10.11542502 13.32917373 11.27785942 8.98640809 10.49295423 3.43274566 10.39081888 -1.61175535 2.19572555 7.44634722 10.00168446 12.17686989 6.38270875 13.37881403 13.67945419 8.71927244 7.07134973 3.34255475 6.66912600 8.03581413 10.41867772 7.65045008 13.09360984 1.97331738 10.19450227 14.09436574 2.71028297 9.02407362 10.87970753 6.98826886 5.14324238 -0.61153490 13.86864803 9.09312358 2.19572555 8.35413961 NA 3.74590420 9.76448085 10.15032218 9.95155166 12.11542502 10.28468786 9.52534658 -0.02664588 12.22203620 10.50599858 7.50729675 8.80515313 NA 11.89837782 14.86166484 9.90932759 9.34690815 11.67462444 9.08879513 0.71026093 3.14324646 7.05013379 9.42315437 12.27414714 -0.02664588 5.31909402 7.02135091 10.27099851 10.77637274 12.66840123 3.63628819 4.84778650 10.31909278 12.24283428 3.34255475 13.79638660 7.00306585 7.32499327 11.85290121 13.75938334 12.60396429 8.55953235 9.91583248 10.59689462 10.78586168 11.52197937 5.38835488 8.08532320 12.81179969 13.57601682 -1.61175535 10.03085843 8.98547681 0.71026093 3.04656091 10.09312371 10.11670121 10.28884497 9.23306118 14.88152291 10.15239767 10.14616209 9.32793477 0.38835488 16.08085518 7.86408893 12.52966434 10.93452645 10.72262876 9.16067015 9.08184237 11.09656422 1.1190000 2.0317000 2.0365000 0.5351800 0.5156900 -0.0197230 0.5415100 -0.0185070 -0.0185070 0.5316700 0.5316700 0.5316700 -0.0072421 -0.0027871 0.5381700 3.6569000 -0.5758600 -0.0162920 -0.0162920 -0.0161700 -0.0091450 -0.5690100 3.6569000 0.5173000 0.5173000 0.4624200 0.4624200 0.4816300 0.5512200 -0.0228260 -0.0176820 -0.0056921 0.5351800 -0.0197230 -0.0217270 0.5415100 0.5280600 -0.0185070 -0.0185070 -0.0189190 0.5299100 0.5299100 0.5316700 0.5371100 0.5371100 0.5371100 0.5371100 -0.0027871 -0.0027871 0.5381700 -0.5758600 -0.0162920 -0.0138840 -0.0094210 -0.0184860 -0.0091450 -0.5778300 -0.5747800 -0.5647600 0.5173000 0.0088755 0.4624200 0.4816300 0.5512200 0.5346500 -0.0077646 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.047 0.000 0.000 0.462 0.462 0.000 1.967 0.551 0.551 0.535 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.542 0.542 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.202 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.047 0.000 0.000 0.462 0.462 0.000 1.967 0.551 0.551 0.535 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.542 0.542 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.202 7.7370837 13.7238854 5.2463359 10.1141477 2.2952528 10.5660864 -1.6117553 NA 8.5645287 8.5595323 NA 7.8787652 1.9733174 9.4784679 8.8529012 -0.6115349 6.8104200 8.9040553 11.3853584 10.6867045 9.4129826 7.5304625 10.2133142 1.1957255 9.3425519 9.5253466 1.5582676 0.7102609 10.7990718 3.0322067 12.3208470 11.6681111 8.2338454 9.9362139 7.1892553 9.5639050 8.9060247 -0.6115349 0.9733541 5.9956858 9.1876371 8.7998664 10.6786624 5.1565382 7.2909717 6.6691260 9.7348691 6.8842108 9.7287620 NA 12.1188256 1.5582676 4.2709998 10.0165139 6.1360786 2.1957255 9.3176139 6.4811132 4.5781779 -1.6117553 13.7299785 0.3883549 10.3932781 -1.6117553 4.8146222 5.2212468 7.8600304 8.8891973 15.3496616 4.6737599 7.9505979 13.3788140 9.9133869 10.9887330 13.0936098 12.5773306 8.7337607 10.5975042 13.1971688 10.1000224 9.4231544 10.4668399 0.7102609 7.4624965 11.9710855 11.463166 7.985067 8.949643 8.977070 8.942944 10.690994 5.088795 7.550747 11.277859 7.240104 4.896151 6.558280 7.145579 10.289599 10.979176 8.764003 8.717030 13.162679 4.032215 9.951552 10.427274 11.527587 9.757408 11.167254 9.143243 NA 8.609943 7.956083 2.911922 10.776373 7.671444 10.376330 10.319093 7.673758 13.985244 10.036263 9.700671 12.700104 10.631827 10.192083 1.710305 TCGA-A8-A094 75 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 4 NA 1 3 2 6 1 1 NA NA 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4.370976e-06 1.110089e-06 11.7074281 1.6429326 8.1380101 10.6575333 NA 10.1227351 3.1283759 9.9503833 10.8253491 5.8908820 9.6052725 6.9134843 7.5689540 10.2413795 5.2279182 9.3708753 9.4503098 9.6697548 7.5108512 5.8601856 9.5133196 11.3602885 13.6926672 10.3877886 9.1743363 10.2744957 6.7967600 9.8927793 0.3210045 NA 9.2383988 11.3881249 12.1083171 7.4503098 12.2147074 12.2432394 8.4783737 3.8445865 -0.6789955 5.0214664 8.1283816 6.8367270 6.1790074 12.1493616 NA 9.4295511 10.5872276 3.4084945 8.6148431 10.9251165 7.9720786 8.6179431 4.0759176 13.4477610 10.2393085 -0.6789955 8.5034211 NA 5.7804571 10.3783416 10.3640540 9.4859335 10.1154426 10.9787917 9.4922035 1.6429326 10.9241894 9.9366563 2.4909551 7.5642006 6.9430786 10.1766738 14.9176241 6.7766831 10.6642124 10.5813582 10.3654208 1.6429326 4.9934525 5.7133439 8.4321623 11.8028261 1.9060055 5.5108512 7.3322541 9.5450284 10.5268199 8.1380101 7.9283573 5.4909519 10.5790038 11.3965058 3.0214620 13.5783409 2.1283924 6.7639705 11.1215222 14.0088398 12.5897149 6.8984551 10.1348079 10.4315100 9.0493043 10.8960931 4.7804571 8.6938918 10.9653337 9.9458222 NA 10.1594428 9.4295511 -0.6789955 1.9131862 10.1790077 8.3125486 9.8514330 9.5341309 15.4250725 9.5426138 9.7133441 6.2158436 2.1283924 15.2147785 7.2635415 12.0627043 11.3146727 9.4631338 8.9648829 7.7681102 9.2613256 -0.418940 -0.125650 -0.162430 0.371900 -0.422010 0.126220 0.484380 0.089833 0.483010 0.000000 0.153510 0.786760 0.753920 0.117100 0.073960 0.018086 0.068504 0.199210 0.199210 -0.339880 0.069221 0.117390 -0.477320 -0.477320 -0.460470 0.049052 -0.247810 0.068217 0.680100 -0.263130 -0.418940 -0.166720 -0.424410 -0.434210 -0.438440 -0.144530 -0.418400 0.089833 0.089833 -0.142600 0.136410 -0.086269 -0.161170 -0.413900 -0.413900 -0.413900 0.144120 -0.442120 -0.065464 -0.450520 -0.442180 0.199210 0.199210 0.199210 -0.351690 0.179640 0.087517 0.245270 -0.482310 -0.477320 -0.430630 0.049052 0.024812 0.072954 -1.051300 0.221740 0.754 0.000 -0.414 -0.414 0.199 0.199 -0.352 0.000 0.117 0.129 0.129 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.270 -0.270 0.118 0.754 0.000 -0.414 -0.414 0.199 0.199 -0.352 0.000 0.117 0.129 0.129 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.270 -0.270 0.118 8.6785787 13.1885950 3.2279105 9.3735947 3.9746578 11.5936565 1.3210045 0.3210045 8.0523458 9.0145137 NA 7.9559102 4.6429557 11.7799459 9.2249085 -0.6789955 5.5498447 9.7987849 10.8203743 9.6631014 9.1343270 7.2810287 10.4758448 2.6429557 8.9756629 9.4922035 3.5689563 -0.6789955 10.0650196 3.2279105 11.9965427 12.6200916 7.7133439 11.4252978 8.6960662 9.2983066 4.2752231 2.7804571 1.9060055 4.4503073 7.9097413 10.4990690 10.6669863 0.3210045 9.6183328 8.2398901 9.7977729 7.4084894 8.8208727 0.9059670 8.3654209 3.0214620 3.8445865 9.7567803 6.1864510 7.5157834 8.4528837 9.4947038 9.4360704 2.7804571 13.6233086 -0.6789955 10.3399224 NA 8.0958137 1.9060055 9.2279172 9.4959523 12.0303755 7.3924892 9.5182434 12.2147074 10.0326936 11.2150865 12.1493616 8.4682318 8.9097413 10.5848828 12.4127926 7.3489326 8.4321623 6.3210261 0.3210045 7.0283857 11.5904456 11.004460 7.069220 8.432162 9.482159 8.197544 10.452954 7.121926 4.905991 10.387789 7.102386 2.642956 6.530480 9.245661 10.216602 11.077583 7.946736 7.828821 10.257665 8.405835 9.485934 10.056583 11.149163 9.227917 10.576055 8.704731 9.651944 8.649522 8.715082 8.188305 10.526820 6.836727 10.618516 10.579004 7.021466 13.177258 10.266471 10.229419 11.811125 10.354450 9.121927 3.321033 TCGA-A8-A095 45 0 NA 1277 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 3 2 NA 3 2 1 4 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.252723e-06 7.230962e-07 11.2320212 7.2715443 8.0729461 10.9988004 -1.5454029 10.3000505 NA 10.0563311 11.9535342 9.0572594 9.4559685 7.8724126 8.8954296 8.9068016 7.4879831 9.7018945 10.6106435 10.3133185 7.0655852 2.4545707 10.1145563 9.4886715 13.3131728 11.2819031 10.1265437 10.9026767 5.3125417 11.0153446 1.6244753 3.9781224 7.9563976 12.2530322 12.0077097 6.9180844 12.2748391 12.8145844 9.2659352 7.0692704 5.2489750 6.0500053 8.3264654 11.1534820 7.4000042 13.2631727 3.7024913 10.4286164 13.6317463 7.2127833 9.3487414 10.9844789 7.3584420 5.0544752 -0.5454029 13.5838289 9.7955231 0.4545971 7.6833793 0.7765252 3.6640163 10.0348189 10.7668761 11.2749388 12.6725938 10.5179554 9.7860373 0.7765252 11.7066344 9.9439067 7.6591318 9.2771311 9.0460828 11.8808251 14.8133833 8.9228383 11.6057355 11.3911983 8.6640138 2.3614596 1.9139904 8.2779276 9.6169516 12.9004159 -0.5454029 4.9623547 6.6688793 10.6194673 11.4950213 7.1269852 5.3734220 5.2619144 8.9524122 12.2354077 2.6244753 13.3847433 6.6591311 7.4460825 12.4278093 11.7709834 12.8608318 8.1428106 10.1322801 11.0158484 10.9685519 11.2346900 5.0544752 8.2375585 12.4518281 10.4907340 NA 9.7960792 9.2432787 0.4545971 3.3416015 10.0898250 11.4170950 10.6965435 9.8692456 14.4562764 9.6517772 9.8850130 8.3629529 0.4545971 15.7196534 10.9759154 13.1312337 11.9271243 10.2830936 9.6749387 8.5656962 10.8120079 -0.00599710 1.21270000 1.18740000 -0.00346270 -0.00346270 -0.00802440 0.37808000 -0.00830050 -0.00830050 -0.01188700 -0.01188700 -0.01188700 -0.00940890 0.00000000 -0.00747200 -0.00290910 -0.00290910 -0.00110870 -0.00173080 0.38221000 0.37578000 0.00263570 -0.00290910 -0.00290910 -0.00290910 -0.01931400 -0.01931400 -0.01931400 0.38006000 0.00610900 0.00110930 0.00041593 -0.00346270 -0.00802440 -0.00802440 0.37808000 0.37808000 -0.00830050 -0.00830050 -0.00830050 0.37759000 0.37759000 -0.01188700 -0.00857660 -0.00857660 -0.00857660 -0.00857660 0.00000000 0.00000000 -0.00747200 -0.00290910 -0.00110870 -0.00173080 -0.00173080 -0.25586000 0.37578000 0.00263570 -0.25322000 -0.00290910 -0.00290910 0.00000000 -0.01931400 -0.01931400 0.38006000 -0.00277070 0.00903120 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 8.190962 13.451343 7.072946 9.307870 2.441882 10.326081 1.776483 -1.545403 8.903709 7.476928 NA 8.096612 4.287450 10.075238 9.112772 3.846874 8.148047 10.160625 9.777615 9.814310 9.728205 8.564391 10.473108 2.172648 9.713715 9.786037 5.692966 NA 10.186304 2.261922 13.045557 12.065009 7.428975 9.931307 7.300050 9.048885 5.182482 2.261922 1.913990 8.472761 8.460185 9.087556 10.468581 4.520649 7.805212 6.851166 10.445019 6.846878 9.496904 -1.545403 12.220572 2.542035 4.182478 10.068336 6.275759 3.583844 9.045148 7.899575 5.739961 2.039524 13.582434 1.039489 10.060040 NA 8.266738 4.739961 7.364453 8.659131 12.054473 7.426104 8.769710 12.274839 10.620723 11.467010 13.263173 12.761121 9.387513 10.803289 13.240983 9.465088 9.616952 9.034819 2.542035 7.361451 11.636489 11.262519 7.825248 9.258683 8.839344 10.244094 10.711692 6.255461 9.088464 11.281903 6.493479 4.235918 4.993720 8.483792 10.167087 9.935855 8.326465 8.242463 13.054822 5.408756 11.274939 10.384558 10.459834 9.869774 10.573826 9.682176 -1.545403 9.344992 7.909888 4.664016 11.495021 7.343304 9.821429 8.952412 8.047018 13.908892 10.057723 10.467883 12.957516 10.764605 9.737070 1.624475 TCGA-A8-A096 73 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 2 NA NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 5.562279e-08 10.86608710 1.82895648 7.42622953 11.09034753 0.32642230 10.78672883 0.32642230 10.38217796 11.79778010 8.07910286 9.96155706 7.55846434 8.17819275 9.50676715 7.35065989 9.67147915 10.58009412 9.59790655 7.58697111 4.78587483 9.65362185 10.32550402 12.25261600 10.79896520 9.85879943 10.55486144 7.15510864 10.26160862 -0.67346265 0.06336488 9.38308129 13.30026050 12.74227335 8.21315624 12.56951836 13.07589405 9.42271951 7.22328063 4.29606823 5.82894379 8.34510758 9.51585632 8.00357582 13.14139315 3.41390544 10.50095319 13.56882378 7.19886244 9.99269721 10.11434607 6.33019625 6.51955763 -0.67346265 15.28811325 12.62580999 2.20091233 8.48883471 -2.25842515 5.43496843 10.07910299 10.48568423 10.88629864 10.71499904 10.18597838 10.08160939 1.06343391 10.90842873 10.18105222 5.98940926 9.57674206 -2.25842515 10.61223112 15.40931334 8.65975548 12.27815325 11.53701344 9.11706357 1.74148856 -2.25842515 9.05776271 9.32126836 11.38375845 -0.25859773 7.96789312 7.50801024 9.98107959 11.58373320 6.65437109 7.67369563 5.56802906 10.84427697 11.86390466 2.98941153 13.93346559 5.94115327 7.67811910 12.42770801 13.33519316 13.05956485 8.11434620 10.25594856 10.99975265 10.61789250 11.59644682 5.79132962 8.21315624 11.98055743 10.57476655 NA 10.56504732 9.05152573 0.06336488 1.20219828 10.25397462 11.02572684 10.26749120 8.65287293 15.08773508 9.86527921 9.45099572 8.32362317 2.98941153 16.38385718 8.61184590 13.24247852 12.26962990 9.98762784 9.86366191 8.81093082 10.46990337 0.00638710 0.62333000 0.62333000 -0.00055444 -0.01010800 -0.00609040 0.00471900 -0.00678130 -0.00678130 0.00485790 0.00485790 0.00485790 0.00198020 0.00791750 0.00666530 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.01113900 -0.00083160 -0.00083160 -0.00083160 -0.00415460 -0.00415460 -0.00415460 0.01684500 0.00638710 0.00638710 -0.00816240 -0.00055444 -0.00609040 -0.01542600 0.00471900 0.00471900 -0.00678130 -0.00678130 -0.00678130 0.00750000 -0.60226000 0.00485790 0.00138680 0.00138680 0.00138680 0.00138680 0.00791750 0.00791750 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.01113900 -0.61575000 -0.00083160 -0.00083160 0.00000000 -0.00415460 -0.00415460 0.01684500 -0.00332430 0.01209700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.60411841 14.01104611 4.37084082 9.95123910 3.69707320 11.11175983 0.32642230 NA 7.81963178 8.41479008 -1.25842515 8.34930158 2.38534820 9.99916359 9.19217690 0.91142315 7.40859299 9.19988775 12.57560642 9.47957334 9.68127338 8.12734335 11.26173142 4.39969064 9.29030298 10.08160939 0.06336488 NA 10.71230594 1.74148856 13.32729452 12.32779311 8.10561575 10.28741088 9.56643978 9.09407637 4.35619312 2.59946063 0.06336488 5.07239740 8.38262965 10.03466528 8.93130573 1.98939336 8.09585165 5.93130484 10.22856740 6.73016577 9.68069304 NA 11.55626381 4.59946063 3.87075925 8.75619202 4.96837650 4.24927846 9.73123043 9.53060707 6.22932066 0.54883115 13.76646920 0.54883115 10.09076228 -2.25842515 9.07575429 3.29607557 7.86689438 9.16879395 13.76652826 5.05436229 8.17819275 12.56951836 10.61353064 10.26308149 13.14139315 12.90379373 9.33253586 11.04683037 13.15613329 10.51996898 9.32126836 9.04469110 0.06336488 7.33206789 11.38025634 11.092696 7.090209 9.250266 8.471951 9.079660 10.050744 8.478728 7.365363 10.798965 8.044120 -1.258425 6.994146 6.634965 13.176142 9.942992 7.822059 8.288376 12.761289 6.284512 10.886299 10.865441 11.955724 10.127883 10.815455 9.691308 NA 9.748968 8.676727 5.516267 11.583733 8.870764 10.508010 10.844277 7.900091 14.135525 10.080217 10.443437 13.262407 10.188564 9.972102 1.200944 TCGA-A8-A097 65 0 NA 365 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 1 3 1 NA NA NA 1 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 2.116108e-06 7.631864e-07 12.3178842 7.0915962 7.1200533 11.7819426 -0.8799135 10.0786058 1.2899525 10.4016935 11.3491723 7.1451924 9.7361425 7.4261146 9.1009067 9.8690845 7.0596322 9.3608445 9.0944678 10.0366790 7.8291367 3.5463142 10.9164984 10.0731583 13.1555826 10.1496855 9.3086421 10.7695339 5.1087377 11.5072358 0.7050490 2.6436253 8.6679116 12.5181956 12.2870008 7.3123457 14.9880075 12.7250696 9.4504098 4.2899746 -0.8799135 7.5123707 8.4181157 8.2363969 8.3197254 12.5726162 NA 10.1420741 12.3286686 4.1644484 9.4030084 11.4828189 8.1396439 6.9144689 -1.8799135 14.4261731 9.6362456 3.9014172 7.9873317 -0.8799135 4.0026935 9.9981041 10.4975348 9.2698002 11.9380361 9.7343028 9.7920364 0.7050490 11.3392217 10.2887253 6.5294446 8.2519103 2.5123786 9.9229734 14.9555485 9.2562240 11.2238327 12.4710614 7.6238786 2.4419880 6.8170207 9.1975364 9.2774002 11.3939944 -1.8799135 7.2596049 7.6038689 10.3488719 10.8859608 6.4008231 6.6119056 5.0507890 10.4948210 11.8117967 4.3679791 14.1185554 6.0209200 7.5400133 11.9224686 13.7475300 12.8595701 8.4204058 11.1851326 10.7402730 10.5658440 10.9483880 5.3392229 8.7621049 12.0555866 9.9394339 0.1200865 10.3261518 8.0684204 2.5794940 3.5449799 10.0629342 9.4809002 10.6507034 9.3739007 14.7321441 10.7573573 9.4988899 8.6169068 3.9014172 14.4246006 7.7439343 12.8542335 10.7955692 10.3536729 9.0720664 8.5209325 10.6070415 0.610220 0.776370 0.945470 0.333510 -0.012257 0.298190 0.330860 -0.329940 -0.407160 3.339900 -0.830980 3.656900 0.866520 -0.417510 -0.428330 3.172600 -0.432080 -0.419150 -0.051244 0.309530 0.477180 0.227000 -0.412340 2.987100 0.831760 0.836080 0.356750 0.946290 0.345830 -0.395300 0.610220 -0.129790 0.333510 -0.051181 0.292940 0.285170 0.262380 -0.329940 -0.374260 -0.735560 0.563180 -0.055364 -0.836480 -0.424290 -0.424290 -0.043941 -0.037082 -0.417510 -0.417510 0.229010 -0.422740 -0.419150 -0.051244 0.000000 -0.047019 0.477180 0.204570 -0.411350 -0.412340 0.787860 0.389820 -0.472890 0.261690 -0.051586 -0.041974 -0.045228 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.200 0.350 0.000 0.419 0.832 0.390 0.390 0.246 0.246 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.295 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.200 0.350 0.000 0.419 0.832 0.390 0.390 0.246 0.246 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.295 8.738439 14.524114 6.952943 10.320952 3.772825 10.566878 2.579494 0.705049 8.479803 8.476505 1.289952 8.781065 5.792478 10.267576 9.678474 3.329511 8.393849 9.586130 8.748499 9.428961 9.921798 8.210166 11.044309 3.901417 8.869923 9.792036 3.763911 NA 11.511431 3.289982 11.584982 11.683964 7.841152 9.532094 8.317270 9.724606 4.734764 4.269804 -0.294951 3.820496 8.438596 8.770207 8.778265 4.441981 8.340516 5.587659 9.820926 6.731077 10.344658 -1.879914 11.630817 2.874935 4.990419 9.245157 7.301504 3.763911 9.950172 8.503757 5.771104 0.705049 13.107672 1.120020 10.662601 -1.879914 6.631806 4.329504 8.621890 9.411224 14.9702850 6.3961783 9.2980956 14.9880075 10.2055256 10.6106534 12.5726162 13.0650854 8.8199466 10.3209518 13.0597701 9.7195011 9.2774002 8.3488720 -0.8799135 8.7693093 11.4614330 11.085296 8.216768 9.485282 8.340431 10.041522 10.122678 7.405456 4.927408 10.149686 7.708768 3.405461 7.210166 7.836153 11.752480 10.015628 9.595123 8.991188 12.085567 5.486377 9.269800 10.993497 10.316963 9.505376 10.774689 9.061101 NA 9.239228 7.435022 5.377440 10.885961 8.649484 9.816712 10.494821 8.680415 13.913199 9.507532 9.842861 12.946353 9.629828 10.078968 -0.294951 TCGA-A8-A099 76 0 NA 304 breast stage x t4b n3a mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 3 NA 2 1 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 11.21049474 5.49129835 8.29621235 11.16907009 0.09044698 10.94567668 0.41229377 10.77319403 11.16288649 9.75575486 9.99241709 7.43471495 9.25218051 8.92488998 7.99580615 9.69358157 10.32313956 8.79172520 5.76284310 0.09044698 8.72794938 9.43082530 13.62277481 8.57725396 9.64979596 10.41093740 5.12383998 11.03011561 NA 1.54986628 7.45892495 12.63791594 13.00082739 7.39419943 13.26694269 13.30067167 9.00555129 5.97306247 3.13481236 7.36886873 8.29499011 7.85529022 6.26534500 13.51704400 1.09044698 8.84697526 13.55480510 6.61398095 9.71475278 10.92903192 7.31923767 5.50827018 -0.90968853 14.26345220 10.77976170 2.09041310 7.23252550 NA 4.88483233 9.53439841 10.35866845 10.60044121 10.55929745 10.63127338 9.57624813 1.41234797 11.30610357 9.99618195 5.29987105 9.57171378 NA 11.84718367 14.49093146 9.23132536 12.33247648 11.73190622 8.11139862 1.09044698 6.87177836 6.20935978 8.18845087 11.57750521 -1.90941752 5.92330847 7.19370670 9.57524179 11.55547506 4.66027264 4.99731048 3.51668337 10.09744620 11.98296171 3.84530939 13.17456289 6.65266144 8.13754297 11.48179676 12.35126494 13.09516604 8.57221817 10.27063885 11.02023208 10.95673769 10.42636750 5.58227298 7.72885450 11.61581734 11.07483735 -0.32463569 9.86972785 8.24143551 -0.90968853 2.09220744 10.15246498 10.42692545 9.63875917 8.98977567 14.49164841 9.78085337 9.22612820 8.58527430 0.41229377 16.59604826 9.77866920 11.73866411 10.65979980 10.26409608 8.54368959 8.97382592 11.33094488 0.57362000 1.59430000 1.58010000 0.03073200 0.02366200 -0.01422800 0.00471900 0.00081885 0.00000000 0.03383100 0.03383100 0.03059100 0.01279500 0.01279500 -0.00968060 -0.00968060 -0.00968060 0.00346870 0.00346870 -0.81597000 0.03480600 -0.02644100 0.02511000 0.02511000 0.02511000 0.00194180 0.00194180 0.00194180 0.05209900 -0.81614000 -0.83082000 -0.04360200 0.02366200 -0.01422800 -0.02016600 0.00471900 0.00471900 0.00081885 0.00000000 0.02048300 0.03510000 -0.82944000 0.04075300 -0.04102400 -0.78950000 -0.04642700 -0.04468600 0.01279500 0.01279500 -0.01436600 -0.00968060 0.00346870 0.00346870 0.00346870 -0.81597000 -0.82952000 -0.02644100 -0.81310000 0.02511000 0.02511000 0.00777830 0.00194180 0.00194180 0.05209900 0.02034300 0.02202400 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.764 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.764 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 8.0122597 12.0539472 3.1778859 9.4474209 0.3169567 10.5302498 NA NA 7.5457460 6.7450544 NA 6.9673346 0.8977825 9.9452873 9.3276288 0.4122938 7.2350770 9.4589254 12.4953608 9.3787082 9.3281249 8.6218002 9.7904251 1.5498663 10.5369853 9.5762481 -1.9094175 NA 10.1320780 2.6753869 12.5518344 11.5275207 7.5333624 10.2235611 7.0358625 9.4095265 3.2998747 -1.9094175 -0.3246357 2.0904131 9.1265925 9.9225178 11.0396985 1.0904470 8.7616769 6.1672355 10.3050415 7.2528102 9.5061606 NA 13.3590705 1.8977825 7.0329328 8.8847453 4.8771455 -0.3246357 8.9950534 8.2925425 7.9201414 NA 13.5419842 0.4122938 9.5575150 NA 8.8725979 4.9483999 8.2067629 9.1745630 10.5169457 4.0676989 8.7707785 13.2669427 9.9280468 11.5847745 13.5170440 12.0927944 9.4385937 11.2195409 13.1714862 7.6678474 8.1884509 8.7654936 -0.9096885 7.9654005 11.4972882 10.9724887 8.3560337 8.2080622 8.2145401 8.8144722 10.3071799 6.5498509 4.3941986 8.5772540 4.8453044 -1.9094175 4.0446127 5.3322604 12.0451604 10.1255616 7.0387862 7.1963277 13.0248008 3.1348124 10.6004412 9.6995976 8.7908587 9.3838904 10.8687014 9.5590430 NA 9.3254519 6.4734752 3.1348124 11.5554751 4.4827386 9.1950175 10.0974462 7.1805308 12.7236412 9.4123469 10.6478826 12.9161727 9.5847744 9.7557549 -0.3246357 TCGA-A8-A09A 40 0 NA 304 breast stage x t2 nx m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 2 2 1 NA 1 4 3 3 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.1971e-06 5.006051e-07 12.3049966 6.9768539 6.4578257 12.0180999 -1.1420986 10.3853904 2.3173330 9.8004279 11.5760181 6.9023076 9.8572088 7.2286003 9.1117609 9.7527312 7.2110599 8.6144699 9.6588133 9.9949045 8.0600371 3.6652677 9.2383744 9.4981583 14.7934468 11.4400554 10.6119657 10.9367313 6.5444143 10.7213253 -0.1420986 0.4428639 8.8858193 13.2785974 12.8254999 7.0575857 14.1583732 12.5859401 9.2480822 4.4428772 -0.1420986 7.0278386 8.8351933 9.4661683 7.9974646 12.7856913 1.6652563 9.5883835 13.3909997 4.7648026 8.7096625 11.2231422 7.0076608 9.2010991 NA 12.6384234 8.0203049 2.4428639 7.5824273 1.6652563 4.2502340 10.6644630 10.6963295 9.4990620 10.5587865 10.0070253 9.6612373 2.7648132 12.3621117 10.0477379 4.0673634 7.8121099 4.8351914 10.2356662 14.9946442 8.1255194 11.5428811 11.8017102 8.7842095 -0.1420986 5.9559451 7.6780923 10.0234485 11.1963712 NA 6.0770827 7.5161247 9.6260978 11.3495160 5.0673677 5.9559451 4.7648026 10.4306136 11.6229922 5.6392727 13.3839846 4.4726242 6.6194644 12.1099874 14.2476119 12.8411742 8.1129420 10.3883197 10.7255783 10.3873879 11.0719289 4.6908026 7.9533106 11.9503402 11.1685261 NA 10.4895451 9.4105824 0.8579014 3.0286399 10.3512684 10.0630957 11.0465022 9.1456257 14.9978244 10.7689308 10.7037954 6.7158947 3.6652677 15.5898953 8.3557651 12.3271736 10.8837451 9.5409080 9.5522712 8.5773023 10.3135386 -0.1298400 0.4312400 0.0284740 0.3747800 0.4278800 0.1334600 0.7095400 0.7094400 -0.3839400 1.8882000 2.6499000 0.6791900 0.6292700 -0.1135200 0.3924600 0.4188100 0.4188100 0.1911600 0.1911600 0.0831910 0.8916500 -0.0399510 -0.3444700 0.4573400 1.0030000 -0.1654700 -0.1654700 0.3106400 0.4369800 -0.1298400 -0.1120800 -0.5011100 -0.3337600 0.0370690 -0.0208310 -0.4677000 -0.6242700 0.7094400 -0.3839400 -0.6689200 0.2794600 0.1413100 -0.3529400 -0.4277900 -0.3384900 -0.0073408 0.0577890 -0.1135200 -0.1135200 -0.1732300 -0.5650600 0.1911600 0.1911600 0.2087000 -0.0890140 -0.3346900 -0.2436300 -0.1466700 -0.3444700 0.4573400 -0.3373400 -0.2483700 0.3106400 -0.0127200 -0.3459600 -0.0863920 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.204 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.000 0.000 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.204 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.000 0.000 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 8.8265803 13.4749790 6.5721590 9.9566034 3.7648026 10.9029904 1.1798295 1.6652563 8.1616942 7.8294570 -1.1420986 9.3844812 1.6652563 10.1548296 8.5035718 1.8579014 8.8844367 9.9407278 12.2202682 10.3666986 9.8624920 8.7065364 10.6178015 2.5583411 8.1707964 9.6612373 2.6652791 3.7158934 11.1985980 3.8121080 11.9196221 11.8141080 7.8968325 10.8624850 8.1317088 9.7700541 6.8004276 0.8579014 -1.1420986 -0.1420986 8.4689380 9.1375240 11.0855293 5.5993803 7.6591368 5.9240025 10.2198571 6.8802815 10.7752854 NA 10.1764562 3.1798454 4.2841810 9.5574599 4.3271484 3.6128007 9.3834341 8.7557589 5.9453759 -1.1420986 13.3909389 0.4428639 10.6111301 NA 9.8394806 4.6652677 8.7018346 8.6077827 13.131128 5.728277 8.761795 14.158373 10.534069 9.903673 12.785691 12.248620 9.120502 11.199710 12.736156 9.848017 10.023448 7.976854 1.179829 8.400945 12.892454 11.318113 6.891337 8.913196 8.561817 8.856504 10.480967 6.955945 8.627751 11.440055 5.086733 4.501770 5.516125 7.112517 11.934395 10.376566 8.105841 8.671695 11.372874 6.427769 9.499062 9.822254 10.904696 9.886510 10.755759 9.130543 NA 8.745408 7.758780 5.585834 11.349516 7.202209 10.120595 10.430614 7.317345 13.360807 9.652329 9.753489 12.769961 10.128209 10.261458 2.317333 TCGA-A8-A09B 58 0 NA 365 breast stage iiib t4b n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 5 3 NA 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 2.224912e-07 11.50182062 8.03300170 7.25319984 11.36220154 0.06336488 10.22114325 0.80033047 10.30853176 11.88886412 9.87394681 9.85724951 6.93374022 10.10913486 8.88248991 7.40619055 9.08296598 10.72158670 9.43769029 6.64833745 0.06336488 10.78703619 10.00197475 13.59532523 10.26427381 8.96323568 10.54920459 4.92135540 10.96499138 -1.52159762 3.12227514 7.99016525 11.08481795 12.58022431 8.95617110 13.23037516 12.74454043 9.42019394 7.17189934 3.38530678 7.14374850 8.45426063 8.51458625 7.82935171 13.05471994 3.76381522 10.49626510 13.64072539 4.03300004 10.47789494 11.56703537 8.83925986 4.60769723 -0.52159762 13.53398286 8.28737671 2.06336488 8.71562263 NA 3.28577209 9.83596480 10.03539765 11.77919429 12.16239426 10.49347932 9.85018934 3.90467677 11.80005903 10.54113351 7.82048726 8.07460230 8.90572545 12.29038944 14.73111514 9.05628519 11.72470799 11.58153659 9.54450200 1.64832738 5.68786694 8.69273196 9.25484580 12.27191447 NA 4.88780306 7.80708761 8.05584151 10.79384542 11.79752033 4.81826261 4.12226685 9.52417242 11.85209359 3.60769723 13.71412784 7.16140704 7.56852544 12.42001062 13.23861290 12.70632949 8.70602869 10.56421714 10.70452385 10.45007485 11.23058431 4.78219361 8.51595958 12.02831771 11.53471175 NA 10.56984811 9.21987977 0.47840238 4.43586191 9.73107817 11.12046444 10.27201607 9.22240562 14.83087005 10.36105585 9.89573779 9.60576229 4.76381522 16.34859081 9.18490881 13.54597316 11.39223713 10.52894163 9.29059005 8.80371816 10.88780633 -0.26741000 1.18730000 1.19470000 0.21530000 0.39413000 -0.40407000 0.43800000 0.34502000 0.34502000 0.43902000 0.43902000 0.43902000 0.15263000 -0.34056000 -0.35886000 -0.36352000 -0.36352000 -0.07641200 -0.07641200 -0.36420000 -0.07080400 -0.04441500 0.23519000 0.23519000 0.23519000 0.20900000 0.20900000 0.21299000 -0.00013862 -0.23667000 -0.26741000 -0.24423000 0.21530000 0.10818000 -0.39286000 0.43800000 0.43800000 0.34502000 0.34502000 0.34502000 0.19536000 0.21330000 0.43902000 -0.54159000 -0.54159000 -0.54159000 -0.54159000 -0.34561000 -0.00027724 -0.35886000 -0.36352000 -0.07641200 -0.07641200 -0.07641200 -0.86153000 -0.07080400 -0.02205800 -0.54964000 0.23519000 0.23519000 -0.34194000 0.20900000 0.20900000 -0.00013862 -0.26893000 -0.23594000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 8.81044921 12.79469429 7.72871100 9.96976481 3.90635189 10.89098263 1.47840238 -1.52159762 8.59085236 8.76727872 NA 7.43412111 5.96222741 10.00637840 9.38605453 2.72632989 7.83596449 8.93784429 12.04077444 11.17971923 9.96987012 7.96021224 10.34684955 2.72632989 9.46922584 9.85018934 2.47840238 NA 10.83266212 2.93785282 11.97751119 11.60592351 8.12407115 10.27160962 7.50355228 9.65146524 5.68786694 4.38530678 0.47840238 2.47840238 9.36181967 9.31997711 10.18921919 4.23329755 8.95715197 6.42092699 10.58987451 5.93784341 9.67193817 NA 10.97576566 1.80033047 7.61026968 9.93406869 7.31392604 1.80033047 8.68664724 7.88992371 4.40915330 1.28575730 13.32635095 0.06336488 10.27647945 -1.52159762 8.44130876 5.66823829 8.14552411 7.86643017 12.5283464 5.5336942 8.2921942 13.2303752 9.6508403 11.1032082 13.0547199 12.9112808 8.8909826 10.7138287 13.1668270 10.6645270 9.2548458 10.5231484 0.8003305 7.6433194 11.5097694 10.956677 7.285767 8.785614 9.078326 9.152605 9.942606 6.565876 8.543156 10.264274 5.986208 3.835964 5.500780 6.983350 10.866161 9.967759 9.775902 8.495221 12.119448 4.285765 11.779194 10.027235 11.546519 9.879826 10.457123 8.908865 NA 9.173284 6.070048 4.544504 10.793845 7.246597 10.256272 9.524172 7.196090 13.156408 9.794694 9.756281 13.008575 10.880092 9.642062 1.063365 TCGA-A8-A09C 69 0 NA 31 breast stage x t2 n0 mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 1 1 NA 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 2.781139e-07 11.70133315 6.98940472 7.17544975 11.59897823 0.09868904 10.88054036 -1.48640819 9.65130342 11.23775920 9.74128765 10.12146436 8.03330791 8.33703891 8.48233848 7.82655484 9.48665163 10.10752965 10.16337709 7.21063920 2.21412481 10.66437110 9.43402455 14.28051122 11.51314334 9.74429264 11.09322343 4.03723285 10.74818983 NA 6.40848939 7.69358104 10.50448484 12.59931019 6.98534673 12.32042276 14.01830458 8.58244987 8.34497892 4.39631707 5.81745186 8.10986147 8.81745250 6.86239932 13.48031240 3.87122268 9.09581368 13.72613016 5.11358383 9.30527426 11.34616626 7.98940529 9.72859792 -0.48640819 13.13394373 7.49381143 2.60112598 7.65322343 NA 2.60112598 9.80484251 10.66943874 9.34180833 11.89886013 9.83559980 9.22705825 0.09868904 11.68061938 10.38750030 6.15752884 8.02739958 2.21412481 11.91521799 14.29077295 7.59816121 11.41189523 11.08020155 7.48521508 1.68360663 1.83560075 8.25007382 10.28887046 10.75416497 -0.48640819 6.01351809 6.93152469 9.37009735 11.31153592 9.24159234 4.79907176 4.98940699 10.83841489 12.24020925 3.42056325 13.72498975 6.62219681 7.39325487 11.36873491 12.10857950 12.97271909 7.90813438 10.41227313 11.10121494 10.83482757 10.98889852 4.85352165 9.14120567 12.68101151 11.69326988 NA 9.78221377 9.36463984 -0.48640819 5.28423649 9.73465459 11.50359839 11.01376672 9.28598635 14.91902933 10.51999786 10.80340247 9.85352181 0.51369286 15.50947204 7.82882132 12.22350949 10.66405371 10.03232487 9.54157776 8.21411169 10.94160528 -0.5356100 1.0521000 1.0964000 0.0072217 0.4876800 -0.5260400 -0.5714000 0.4132900 -0.5442100 0.5253800 0.5253800 0.5207500 0.0256710 0.0256710 -0.5603700 2.7266000 3.6569000 0.3670900 0.3670900 0.1813200 0.5460300 -0.5217400 -0.5334800 -0.5251200 0.0855100 -0.1508000 -0.1508000 -0.1508000 0.2869100 -0.5181500 -0.5356100 -0.1545200 0.0072217 -0.6305500 0.0132130 0.7614000 -0.5566700 0.4132900 -0.5442100 -0.5511000 0.0108420 -0.0015171 0.5102600 -1.1477000 -1.1253000 -0.1179600 -0.1144300 0.0256710 0.0269350 -0.5449200 -0.5516600 0.3670900 0.3588800 0.3588800 0.1813200 0.5460300 -0.5164800 0.0203430 -0.5308300 -0.5251200 0.0000000 -0.5123900 -0.1508000 0.2869100 0.0290440 -0.5219400 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 8.01550872 12.93126061 6.73284036 9.68859739 2.42056325 10.79878493 0.09868904 NA 8.84458871 6.96075495 -1.48640819 7.26186456 2.97309692 10.11822500 9.53603949 3.42056325 8.53187189 9.64488573 9.90007326 10.89359156 9.51537559 8.21757535 10.11683439 0.83560075 9.88272374 9.22705825 2.68360663 -1.48640819 10.67101874 1.83560075 12.59939319 11.89521472 7.51648641 9.37165273 7.12100193 9.57908792 5.42056325 -0.48640819 1.97309692 9.82712164 9.12192664 9.27854331 10.22361719 4.79907176 7.70394094 6.96488261 9.94203191 4.97310151 9.99193575 0.09868904 11.65514035 2.09862168 4.53604046 9.95284300 6.33939397 1.09862168 8.21757535 7.84010126 5.06826236 NA 14.46425045 0.83560075 10.68453571 NA 8.52210049 4.12838414 7.22791721 8.79791762 14.005042 6.128382 8.094873 12.320423 10.867466 10.878901 13.480312 11.448653 11.745343 11.170544 13.190015 11.782798 10.288870 9.283510 2.420563 7.752076 11.792992 11.0197314 8.1952792 8.6810897 9.4780126 8.0214664 11.1550146 5.2001708 9.0095269 11.5131433 5.7034967 3.0986385 3.6429557 8.5088877 10.2892821 10.2483814 9.4965013 8.8930500 11.9731034 4.2141093 9.3418083 10.7813363 11.1995156 9.9283570 10.7056563 8.3258491 NA 9.1987885 7.6585593 2.5136676 11.3115359 6.8712239 10.6390853 10.8384149 7.6117036 14.4992914 9.8635058 9.9320514 12.3032054 10.5794245 10.0725708 0.8356007 TCGA-A8-A09D 47 0 NA 1522 breast stage iib t2 n1 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 4 NA NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 3.337367e-07 11.8301740 8.6225863 6.4230049 11.5266365 3.7689994 9.2758631 NA 10.1270708 11.7957689 6.8909914 8.9966881 7.4856699 9.4246899 10.2211820 5.7368213 8.5580556 10.3763317 10.2735282 7.5672351 4.2361252 10.2735282 10.0711699 14.5158367 10.3424259 8.8017766 11.0177661 6.2513934 10.4288882 NA 2.3819755 10.2134073 11.6311829 12.6213932 9.2080378 12.1710102 12.6062583 10.0186029 6.4162486 3.5884328 8.0565781 8.2361276 8.0717074 7.6730603 12.2570778 2.0034583 10.1260359 13.2683783 3.1409749 8.9933551 11.2606187 10.5191665 8.7066780 0.2665167 13.5191123 10.5495894 3.6357312 9.7449335 NA 5.0034673 9.9294660 10.0489533 9.7469546 10.2953280 10.2182714 9.4848624 2.3819755 11.6339158 10.6255184 5.8812119 6.9247128 13.3179366 10.0813505 15.1434815 8.7977264 11.5865494 11.6028216 8.0012106 2.0034583 6.9715573 7.6645319 9.2138945 11.1151240 NA 7.2513944 7.0258350 9.9007070 11.1368657 5.6588199 6.1653552 6.0565770 10.4800103 11.4015690 7.4060528 13.5467885 4.0390945 7.1572721 11.6573865 13.1876601 12.6330965 7.3610182 10.1818825 10.7045998 10.1160729 11.5420436 5.0390901 8.5748402 11.5704720 10.6955590 0.6814942 10.3054200 8.8185298 -1.3183259 3.2826474 9.7913692 11.2987764 10.2627391 8.4775782 14.7343401 11.2437809 11.5936794 7.6843538 2.3819755 15.8317221 7.8787554 11.9085527 10.9890240 9.7011293 9.2119450 8.6559532 9.7921327 -0.12733000 -0.12733000 0.00930980 1.17220000 0.01824300 0.01126100 0.00110930 -0.00166290 -0.02479800 0.00388540 0.00388540 3.42380000 0.49995000 -0.04292400 0.00388540 -0.05226100 -0.49923000 -0.01560400 3.65690000 -0.00609040 3.10250000 -0.00871460 -0.03435900 -0.55677000 0.93895000 -0.03585700 -0.03585700 -0.03585700 3.65690000 -0.12733000 -0.12733000 0.01978700 -0.53906000 0.01126100 0.01098200 0.00332990 0.00332990 -0.00166290 -0.02479800 0.00527490 0.00569190 0.00513590 0.00388540 -0.04251700 -0.04251700 0.44172000 0.00277450 -0.04292400 -0.04292400 0.00388540 -0.53296000 -0.01560400 -0.54179000 -0.54945000 -0.00609040 -0.45329000 -0.00429290 -0.00027712 -0.03435900 -0.54865000 -0.54623000 -0.03585700 -0.03585700 0.00000000 -0.03313200 -0.56744000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 9.3932055 13.7060722 4.0738545 10.4213191 2.3941300 11.1224077 1.0034583 0.2665167 8.6152290 8.6983470 NA 8.9749873 5.1733913 10.0297133 9.0169289 2.8514592 8.0522257 9.6100568 8.0888063 10.9085527 9.5716357 7.1327496 12.0611877 2.0034583 6.3397503 9.4848624 2.4889006 NA 11.3026747 2.2664867 12.0594269 12.6787180 8.5426253 9.7703268 8.9282791 9.8101773 6.0213887 1.6815392 -0.3185058 0.2665167 8.7341067 9.3136250 10.3397500 6.2206975 6.2361271 6.8762959 10.3728459 6.3253954 10.1613189 NA 10.5914316 3.0034583 4.2962518 9.4900522 5.5944291 1.4888749 9.4808201 10.1270708 7.5549825 0.2665167 13.3589278 1.4888749 10.8233264 NA 8.6342796 5.7368213 7.9103573 9.5641815 12.8771860 5.9669403 7.8414096 12.1710102 10.0728466 10.3181632 12.2570778 11.8193302 8.2361276 10.8423554 12.5176875 10.1109452 9.2138945 7.7610233 0.2665167 7.9483252 13.0067737 11.394280 4.747629 8.857712 8.778254 7.551904 10.183525 6.976160 9.036890 10.342426 6.934204 1.488875 5.073855 7.893451 11.356613 10.625152 8.461258 9.591432 12.104786 5.266502 9.746955 10.011895 11.582217 10.621852 10.763688 9.283309 6.980746 8.939563 6.938927 2.588421 11.136866 7.650205 10.451789 10.480010 7.495319 13.168311 10.650925 9.952418 11.831444 10.561887 9.670933 2.003458 TCGA-A8-A09E 73 0 NA 1492 breast stage iiib t4b n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.112456e-07 12.4107429 4.6547277 5.9899088 11.9772084 NA 9.1480576 NA 9.6365782 11.1060635 8.0732268 9.4988640 6.6876402 8.6082057 9.6089219 6.3188591 9.0948599 9.2580666 9.6110682 5.8515267 1.8022759 9.5814548 10.4703798 14.2877487 9.9643943 8.0607181 10.7801986 4.4652497 10.6277716 NA NA 6.6767512 9.8979728 13.1227699 7.4300193 13.7448380 13.4455377 8.9964924 7.6181997 5.2905682 8.8430291 7.2248150 8.3704498 6.0332380 12.9752658 2.0918014 8.3223559 13.8319534 4.0917929 10.2830057 11.1634955 8.6588813 8.7525957 -0.3677318 14.5482913 7.9632747 -0.3677318 6.5630956 NA 2.0918014 9.8665764 9.9441060 10.6825465 10.0643777 9.1191927 9.9131285 0.9542708 11.1184386 10.4782398 6.1945993 8.5362394 NA 10.2976937 14.5727631 6.3434398 11.7537294 10.9783173 8.0073974 -1.3677318 6.1637382 7.6010242 8.4620805 10.3034564 -1.3677318 4.8802839 7.8826559 10.0433390 9.4856673 4.0917929 3.8802839 4.1242123 10.6906878 11.6321816 5.3188591 13.8616272 6.7512990 7.6124970 11.1156697 13.3821748 12.6908569 9.7622847 11.0406875 10.2603475 10.0835688 10.0887122 5.4397129 7.7512990 11.3731926 11.3142550 0.2173548 10.2243475 9.2580666 1.8022759 3.7257521 8.6971007 10.9674689 10.1724858 9.0353699 15.1993631 10.1191927 9.6498622 8.3738248 -0.3677318 16.0922056 10.0182202 13.1248995 10.0073972 10.6135682 8.5850989 8.0835687 11.1465071 0.79588000 1.35780000 1.48800000 0.49683000 0.54030000 -0.43588000 0.03524200 0.51560000 -0.53195000 0.61843000 0.61843000 0.99156000 0.40377000 -0.57851000 0.01195800 3.65690000 3.65690000 -0.00041585 -0.00041585 0.01810100 -0.05886600 0.30956000 0.39363000 1.30830000 0.42402000 0.32914000 0.32914000 0.32914000 0.47907000 -0.57723000 -0.54603000 -0.17787000 0.49683000 -0.75124000 -0.35738000 0.03115500 0.03115500 0.51560000 -0.53195000 -0.58711000 -0.08603000 0.03425400 0.61843000 -0.53946000 -0.53946000 -0.00304750 -0.13083000 -0.55870000 -0.56495000 0.01195800 -1.13020000 -0.00041585 -0.00041585 -0.04410200 0.00073049 -0.05886600 0.52660000 -0.02096100 0.39363000 0.42402000 -0.54552000 0.32914000 0.32914000 0.47907000 -0.00401620 -0.12240000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 -0.577 1.538 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 -0.577 1.538 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 6.9677485 11.9408390 5.1559192 10.2892295 3.8768607 11.2557821 3.2173238 NA 8.5865542 6.5088755 NA 6.4778473 4.1869442 10.5660484 9.4715616 3.5865486 7.0544220 9.5065706 11.1948387 11.1284625 8.5744176 7.1441106 9.2516606 1.9542708 10.8044727 9.9131285 2.8802937 NA 10.8372345 1.8022759 11.0628103 12.1671470 6.1161734 8.9832969 10.3534569 9.8725528 5.6435849 1.4397295 -0.3677318 5.0073974 9.4445350 8.2905691 10.5271755 3.7616363 9.8836390 7.2433825 10.7751031 4.3328010 10.1642265 NA 11.8758293 0.2173548 3.5865486 9.6140677 7.2590888 2.5392581 8.8707626 6.9361385 7.5150012 1.4397295 13.1833450 0.9542708 10.8469804 0.6323613 5.9632753 3.5392457 8.1984116 10.5934457 13.6563312 7.2135582 8.1141572 13.7448380 9.9497704 11.5959764 12.9752658 11.0260163 9.3208003 10.5616162 13.6153068 10.4182188 8.4620805 9.3353962 -0.3677318 7.8921008 11.3461739 11.1037790 6.9632741 7.9223769 8.9200702 9.6781173 10.1684932 5.1715151 7.6740171 9.9643943 8.4699857 0.9542708 4.4903391 8.2587968 8.6505578 9.1811796 6.5027220 9.1608118 11.0517913 4.6984463 10.6825465 10.3876626 10.8013432 10.7024787 10.6305956 7.4809808 -0.3677318 8.3644065 5.8991442 3.9542894 9.4856673 5.3602765 10.6114828 10.6906878 6.6323584 12.6329740 9.6869622 8.8743408 12.4457381 10.3431642 8.8122668 -0.3677318 TCGA-A8-A09G 79 0 NA 0 breast stage iiic t3 n3a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 1 NA 1 5 2 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.140181e-06 1.526373e-06 10.8882233 6.1989243 7.4941572 10.5728043 -0.7079251 9.8961235 0.2920749 10.1742944 11.9771108 6.6929126 9.5617446 8.0535849 8.5160352 9.4588243 7.5470619 10.0402264 10.9767822 9.9850848 7.2019269 5.7838862 10.2090326 10.6781655 13.0750829 9.9475643 9.8637863 10.4325438 7.2491353 11.0071204 NA 0.2920749 8.6162140 10.7563241 11.7442748 6.3144011 15.6019983 14.1693896 8.2316129 4.3794962 -1.7079251 4.3364262 8.0199543 7.2607003 4.9785343 13.0522337 4.6139618 9.3275201 11.8197549 5.6495867 8.7003634 11.8436216 9.0937419 7.0733929 1.8769982 15.6545075 11.7809532 2.7514637 9.7888873 NA 5.7182986 10.5929581 10.4038213 9.1296614 11.8182883 10.6424203 9.5286457 2.9924784 12.3286365 11.1398739 6.7308261 7.5704827 7.3391579 10.9723930 14.8636381 8.2468114 9.6462829 11.2107105 8.0148412 1.8769982 0.6140030 7.6026462 9.1800158 11.4869443 NA 7.5935301 6.8882233 8.9367910 11.7671336 8.3486711 6.8580879 4.4619607 10.1650930 11.7841371 5.1122122 13.8798111 4.7182959 7.1406570 11.6371615 12.7781143 12.7955488 4.9213887 10.4209945 10.3884192 10.0339218 11.4846346 5.0864484 8.5716442 12.4907088 10.0709320 4.2920308 10.0593904 8.7535129 -0.1229625 3.0549179 10.5027049 10.7923775 9.5154320 9.1515684 15.0875659 10.2049228 10.2385743 8.5505994 1.0993625 15.8410962 10.3230454 12.4781478 11.5573556 9.9551468 9.8047740 8.4594517 10.7767155 -0.5624600 0.5367800 0.5367800 0.0025811 0.0055529 -0.5537700 -0.0136770 0.0146090 0.0146090 0.0181030 0.0181030 0.0181030 0.0034687 0.0034687 0.0023734 0.0052749 0.0052749 -0.5964300 -0.0019399 -0.5828400 0.0237060 -0.0080244 -0.5896000 2.5891000 3.6569000 -0.3189100 0.1653500 -0.0789430 -0.0202750 -0.3083900 -0.5720000 -0.2257600 0.0025811 -0.5537700 -0.5537700 0.0173180 0.0173180 0.0146090 0.0146090 0.0034057 0.0129710 0.0094064 0.0181030 0.0238470 0.0238470 0.0048579 -0.0034658 0.0034687 0.0034687 0.0023734 0.0052749 -0.5530200 -0.0019399 -0.0019399 -0.5530700 -0.0113570 -0.0080244 -0.5689200 -0.5896000 0.9436400 -0.5576700 -0.6108500 -0.6073800 -0.0202750 0.0033299 -0.0425170 0.000 0.000 0.000 0.000 -0.551 0.000 -0.553 0.000 0.000 0.000 -0.544 -0.546 -0.546 -0.558 -0.558 -0.240 0.000 0.000 0.535 0.000 0.000 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.554 -0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 -0.551 0.000 -0.553 0.000 0.000 0.000 -0.544 -0.546 -0.546 -0.558 -0.558 -0.240 0.000 0.000 0.535 0.000 0.000 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.554 -0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 9.0216543 11.1602774 1.7514637 8.6993014 4.2462333 10.9227557 3.2462256 NA 8.6484856 7.3500251 NA 6.2276121 1.7514637 10.0807519 9.0131328 4.8466237 9.2870941 9.9622472 10.7923775 11.2678815 10.3914339 9.1430018 10.3343769 2.6843475 9.2041745 9.5286457 3.7182959 2.1989341 9.7863892 2.4619476 12.7689696 13.3824355 7.3309527 10.0929335 9.0402264 9.7308254 7.0896952 2.6139559 0.2920749 3.1500072 8.3432426 9.8609397 11.2205519 4.0469188 10.0653747 6.4619590 9.3933527 7.1406570 9.7093587 NA 11.9366785 3.3364262 4.1746781 9.3723847 6.5023640 7.4519051 8.3213207 8.9030585 8.8418181 1.9924784 13.4462583 2.4619476 10.0909103 NA 8.3046580 5.5681568 8.0519218 8.4818579 12.507718 6.835065 8.109017 15.601998 9.893340 11.293090 13.052234 9.246957 9.210897 10.165862 13.046921 7.821464 9.180016 6.935890 4.935889 10.734459 12.160181 11.582340 8.131238 8.445586 9.052754 11.146707 10.518142 7.964459 8.233081 9.947564 5.246229 0.614003 6.899364 8.123942 12.241313 10.719608 7.823415 9.150015 9.826823 8.464461 9.129661 10.649586 11.853083 10.370851 11.002194 9.758620 NA 10.169697 8.466760 8.257818 11.767134 5.658357 10.920023 10.165093 8.240401 12.898497 10.064761 10.881685 14.072291 10.033922 9.710940 3.684347 TCGA-A8-A09I 84 0 NA 1371 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 56.63.0 6 3 1 NA 1 5 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.018055e-06 9.713281e-07 12.661460648 3.294517827 5.568545958 10.636724754 NA 10.374379747 NA 10.190073798 11.206792406 11.713141133 10.450468036 7.039554074 9.043391535 9.846594858 8.027425571 9.381543816 9.342472521 10.438443818 6.877020267 6.913424411 9.396623617 10.260769260 13.970902910 10.996934117 8.852856556 11.132946157 5.803924446 10.272728333 -1.320125852 -2.320486121 8.643422956 11.695306341 11.946371121 7.832088716 17.510885613 13.786162637 8.167644443 6.279716429 2.724191854 4.798745247 8.773881962 8.887428702 6.901391878 12.841841401 NA 10.619934191 13.780733389 0.264716569 9.454364692 10.768757980 6.474220239 4.586692697 -0.320125852 15.078695807 10.114693016 0.487177608 7.752606777 -2.320486121 4.106071883 9.825736346 11.204345920 9.353996530 11.414407979 9.832405871 9.736103213 3.171655198 11.143073084 9.905312837 5.330855943 8.048310852 -2.320486121 10.722831434 14.157024875 8.504126566 9.633273171 12.123071518 8.262886935 0.679784089 3.380244590 8.304599565 8.901995170 10.932912968 -1.320125852 5.674158364 7.253451369 9.231031770 11.029638263 6.493584894 7.399193315 5.373289755 10.692428680 12.122164558 6.301856481 13.563521402 5.941899763 7.041747846 11.824860636 12.591991824 12.929399139 7.862198439 11.075606032 11.278089378 10.699916039 10.738134239 4.809085118 9.064048326 11.996156421 8.695219242 -1.320125852 10.168146460 9.141795248 0.001730196 2.633524209 9.604987733 10.804087046 9.499584026 9.431348208 15.314572694 10.110518023 9.810696459 8.688932848 0.264716569 15.481632503 8.003984446 11.746313858 11.240017554 9.947761260 8.751936646 8.433020771 10.524984446 0.2969200 0.9875400 0.8951600 0.3833400 0.0260340 0.0250150 0.0372170 0.0228510 -0.3475700 0.0508190 0.6763400 0.7543300 0.2296200 -0.1260300 2.1319000 0.4076100 0.7021400 -0.2165100 0.3661800 -0.6655900 -0.2944900 0.0892720 -0.7100600 3.6569000 3.6569000 -0.3099600 -0.3099600 -0.3099600 0.5647200 -0.6888700 -0.6907000 -0.4005200 -0.7015400 -0.3228600 -0.3407900 0.0372170 0.0372170 0.0228510 -0.3172700 -0.3475700 0.1000200 -0.2950300 -0.0077482 -0.2918900 -0.2918900 -0.3012600 -0.2819200 -0.1260300 -0.1260300 -0.2927200 -0.7131000 -0.1033300 0.3661800 0.3661800 -0.2980400 -0.3344500 0.0892720 0.0468420 -0.7100600 -0.6978500 0.0243520 -0.2897600 -0.3099600 0.5647200 -0.2934300 0.0128800 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 -0.689 0.206 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 -0.689 0.206 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 8.0494015 12.5859902 5.9512661 9.2295889 3.0721230 10.8343058 -0.3201259 -1.3201259 7.9904172 7.7337299 NA 7.1386210 0.8497591 11.1096032 8.8929083 3.2647616 6.5158543 10.0011686 11.2668785 10.9952368 9.1902025 7.6223184 9.9941042 3.2945178 6.7431999 9.7361032 0.2647166 -0.7352834 10.4434316 1.9277448 11.8515283 11.6925160 7.2534514 9.7364418 11.0311576 9.2449063 5.9605743 1.7672734 -0.7352834 2.0017302 7.5470827 8.4313484 10.6236010 1.9277448 8.0111244 7.5655005 9.9597050 7.8989726 9.5095268 NA 9.4758439 3.2033735 3.3802446 8.7578550 5.7389867 5.6455893 8.9599950 8.7125387 6.9465905 -1.3201259 13.9731321 0.2647166 11.1237837 NA 8.2305508 3.5126946 8.1616035 8.1726590 13.320356 7.588197 8.669199 17.510886 9.517602 11.628171 12.841841 12.346749 9.574243 10.453356 13.407379 9.503569 8.901995 8.725564 1.139208 10.758122 12.087072 10.9747121 7.4823207 8.2972717 9.0886645 9.0079181 10.3485917 6.8244624 3.5624500 10.9969341 4.3663012 -2.3204861 8.7207788 9.2879434 10.0414738 9.9471761 7.6670682 8.9949539 11.5640701 6.6769838 9.3539965 10.0825499 11.1734095 9.2067924 10.5346726 9.2899061 2.2033578 8.3479801 10.5092296 6.4839351 11.0296383 7.7007844 10.3839239 10.6924287 7.5409688 12.9888897 10.0053907 9.7801380 11.5572800 10.3566428 9.0580989 0.8497591 TCGA-A8-A09K 68 0 NA 912 breast stage iia t1c n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 4 NA 3 2 1 1 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.668684e-07 11.0362968 5.0025855 8.3912810 11.9715539 -1.2453690 10.9567803 1.9245940 9.5620113 12.3417307 13.8468768 10.4168797 7.7001005 10.3087656 8.9018613 8.3712051 8.6433999 11.1722453 9.3005862 6.3619876 5.2303913 11.9336325 10.5244943 13.4867709 10.2952689 9.1924085 10.8407927 7.0900468 10.6296378 -1.2453690 NA 8.1122086 10.4415946 13.1537341 7.7088528 12.9370508 13.9976072 7.4128679 5.2303913 NA 5.2782190 8.5938602 9.0989524 5.0945063 13.2106900 4.1122080 8.7088528 15.2114440 1.9245940 9.2868664 11.7906583 6.8631815 8.9005885 0.3395935 13.0687950 10.9726142 -1.2453690 7.4376514 NA 3.1469810 10.4706184 10.2079271 9.6742647 10.2012229 10.0475532 9.9018614 1.9245940 11.8016099 10.3536394 6.9592277 6.8942078 4.2465069 11.8834564 14.9898106 9.0073929 11.8038243 10.6001465 9.3767082 -1.2453690 0.3395935 7.6250213 10.0995072 9.8010983 NA 4.0400595 8.0096848 10.7700715 10.1777723 6.6373001 6.6434002 4.3092417 9.4341365 12.0149880 1.7546738 13.7760703 6.6615472 8.5045259 9.9561678 11.0016939 12.9130295 8.2263317 9.4524929 11.0970090 11.0953495 11.6439703 5.6853936 8.7880795 12.3306683 12.0196854 NA 10.2253153 9.4944370 2.2140937 2.6625018 10.7749419 10.3306683 9.6971711 9.3776233 15.3447610 11.7269183 10.5903121 9.6327074 2.5620104 16.6620870 8.8592552 11.2460086 9.6357704 10.8996333 9.4411571 8.8274589 10.6177044 0.01405100 0.23303000 0.36838000 0.39612000 0.44122000 0.01070300 -0.09538400 -0.44848000 -0.43810000 0.75108000 -0.90107000 0.98783000 -0.01367700 -0.01615400 0.36723000 -0.44534000 -0.44534000 0.14414000 0.01698500 -0.40362000 -0.43929000 0.25730000 -0.45586000 -0.44145000 2.12360000 -0.05859600 -0.05859600 -0.05859600 0.36381000 -0.03245000 0.00069327 0.00000000 0.39612000 0.40794000 0.01028500 -0.43225000 -0.43225000 -0.43409000 -0.44129000 -0.44512000 -0.44814000 0.07742500 -0.94005000 -0.01725400 0.51612000 -0.01794100 -0.06665400 -0.01615400 -0.00664320 0.40144000 -0.44534000 0.00986690 0.00930980 -0.01078400 -0.43539000 -0.43453000 0.25730000 -0.46253000 -0.45586000 -0.44145000 0.38320000 -0.16841000 -0.05859600 0.31691000 0.32060000 0.38056000 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.317 0.317 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.922 0.004 0.000 0.000 0.000 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.317 0.317 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.922 0.004 0.000 0.000 0.000 8.692766 10.373959 5.293816 7.434137 4.623293 10.699002 1.562035 NA 8.407501 3.708849 NA 5.390702 0.754631 10.334444 9.380365 1.924594 7.922075 9.444654 8.894208 9.878131 10.019855 7.842120 8.320710 1.924594 8.526146 9.901861 2.924575 1.339594 10.287012 3.883943 12.079821 11.282378 5.496124 9.485976 7.332085 9.151261 1.076559 2.754652 -1.245369 3.214094 9.689822 8.805865 10.052146 2.076593 8.381844 7.081086 10.220223 7.782563 11.088650 -0.245369 9.790143 1.754674 3.799046 9.525461 6.125955 7.081086 8.316899 8.792203 7.697171 -1.245369 13.271157 0.754631 10.576430 -1.245369 7.578024 3.002577 8.855319 8.448144 13.275091 6.085573 8.723323 12.937051 9.855319 10.106148 13.210690 14.901762 8.272326 10.964719 12.412868 11.112483 10.099507 7.809939 -1.245369 8.430614 11.313795 10.782217 7.906941 8.919551 9.938292 8.414652 10.591799 6.618842 8.123163 10.295269 6.455095 3.076576 3.661544 7.489637 8.491059 10.544598 10.527383 9.343371 11.619616 8.226332 9.674265 11.051859 12.396144 7.720441 10.491481 9.181969 NA 9.094963 4.944479 7.571640 10.177772 2.562010 11.309245 9.434137 7.373042 13.194033 10.124254 9.879424 11.260220 9.817377 10.435895 2.339622 TCGA-A8-A09M 75 0 NA 1006 breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 1 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.613061e-06 5.840393e-07 11.50993985 1.31591397 5.54195462 11.29786156 NA 9.45177901 NA 9.43334424 11.20680223 13.13993612 10.03551985 7.41842442 9.15238778 10.18184076 6.71310328 9.57596594 9.75051489 9.04088750 6.50288589 3.09349257 10.56449192 8.72285090 13.06437898 11.11030249 8.65446383 10.19328029 7.36961828 10.68657397 NA 3.15239437 7.82141494 10.15778789 13.37145956 9.31266268 12.88912801 12.76930423 8.15599001 6.65827862 3.46273292 7.85060630 8.23815248 10.47323350 6.47431598 12.49009896 5.10844500 9.39879606 12.90453432 3.93479954 9.49579568 11.23368486 8.51555911 8.54195462 -0.49146993 14.29021232 12.02483742 0.09356018 6.63781453 NA 4.48581321 9.70943022 10.09208465 9.26425375 9.25672457 10.08501601 9.15419002 1.09349257 11.17519953 10.09255459 6.27671625 7.58801673 0.83049873 11.41879961 13.97680569 9.77796227 9.94002929 10.89385484 8.42888439 1.67847761 0.83049873 8.27671579 8.92110155 10.78057823 0.83049873 5.96796399 7.56381403 9.88953378 9.42515756 4.81231338 6.40334954 5.23645052 9.68781884 11.85241137 2.75646826 13.02693895 5.48580999 7.12691712 10.46272801 12.42832609 12.90466815 8.40637723 10.23815237 10.52533992 10.34069778 10.71463027 3.75645758 9.11215798 12.43037260 10.79422284 -1.49126712 10.43742012 8.99837972 1.50853007 4.00230647 8.97103392 10.26758765 10.93846143 9.77356058 15.23437719 10.97026691 9.86112693 9.13970866 2.09349257 16.33091578 9.07648775 11.24746835 10.53988831 9.53089944 8.79508929 8.04769052 9.69835619 0.1536700 -0.1785300 0.7309400 -0.1757500 0.4288900 0.1149800 -0.0070576 -0.1680200 -0.6703900 0.1923800 0.1923800 1.7244000 -0.3362900 -0.0408880 0.1677500 0.1647500 0.1647500 0.1398400 0.1398400 0.5233100 0.1933000 1.4907000 -0.6395400 0.1757300 1.0986000 0.1303600 0.1700100 -0.2072200 1.3797000 -0.3802200 0.1536700 -0.6646700 -0.6591900 -0.3706500 0.3236600 -0.3509000 -0.3509000 -0.1680200 -0.6703900 0.3119300 -0.1893600 0.2139200 -0.6957700 -0.4745500 -0.3360600 -0.3360600 -0.1739800 -0.5170200 0.4376700 -0.1835800 -0.6571500 0.1398400 0.0536640 0.0536640 -0.6634600 -0.6529500 -0.2923600 -0.6552900 -0.6420800 0.1757300 0.4361400 -0.3203000 -0.2072200 0.0038854 -0.0883740 -0.6521100 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 8.8134535 11.7317792 3.7179889 9.4146707 2.2634251 10.6009585 2.0934926 NA 8.6274726 6.7611975 NA 7.3382541 1.9679801 10.6624004 9.5752936 4.4858132 6.4510462 8.9812225 6.2767163 10.0783873 9.2831046 7.4886709 9.5658466 2.3158850 6.1451557 9.1541900 1.6784776 -1.4912671 11.1333271 2.0934926 12.3368665 12.2580869 7.0242310 9.8737605 11.2584011 9.4436968 4.3911766 2.6784551 NA 0.8304987 9.3888805 10.0217658 10.3942281 -0.4914699 8.9750670 6.7082038 10.3021350 4.9679617 10.2841420 NA 10.0698196 2.6784551 3.5529303 9.6135956 6.1200720 7.2193380 10.1658502 8.6557364 9.6803340 NA 13.7105407 -0.4914699 10.4865270 NA 6.5583809 3.9008475 7.7729743 9.0953714 13.7719931 6.7277000 8.9730774 12.8891280 10.3146785 10.5288171 12.4900990 14.2200642 9.0764877 10.2158908 12.1496803 10.6006281 8.9211016 7.7421511 0.5085301 7.8461535 11.3251154 10.91260878 7.30943179 8.61050740 8.72648930 8.86608362 9.80612440 7.01235748 6.15238829 11.11030249 7.32871083 0.09356018 3.09349257 7.77882687 9.22019861 10.24620154 8.83158657 9.28907134 11.08217885 8.13424045 9.26425375 10.18272395 12.37899273 9.36651259 10.75021699 8.33349037 NA 8.76268633 7.16316761 7.66840282 9.42515756 5.27671625 10.85836579 9.68781884 7.51724026 13.50637271 10.06743060 9.74813028 12.42692910 9.66334978 9.86937870 2.83045816 TCGA-A8-A09N 57 0 NA 31 breast stage iiic t2 n3a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 6 3 4 NA NA NA 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.630444e-06 6.591155e-07 12.009806 4.932992 7.719587 11.313730 -1.196277 10.159059 NA 10.100050 12.198974 11.679265 10.484507 7.991060 7.896465 9.493706 7.716597 8.161260 11.471706 9.419337 6.213098 2.803702 10.027709 9.018027 13.695918 11.247687 9.540955 10.908634 5.792392 10.343332 -1.196277 3.125635 7.472593 11.026201 12.372376 6.769491 12.236380 14.354034 9.767326 4.585065 1.973648 5.433063 8.452964 9.038525 6.003380 13.320454 2.803702 8.707590 13.463704 8.234160 8.902437 11.373326 4.196025 5.636599 NA 14.358306 8.139098 2.973630 9.011942 NA 3.196025 10.459238 10.526942 9.301560 10.851172 9.242500 9.338983 1.611078 12.034779 10.030722 5.545175 6.912232 -0.196277 10.673687 15.188323 8.852835 11.314472 10.404085 7.447563 -0.196277 2.611054 7.307533 8.790972 11.371664 NA 4.531631 7.667894 8.687878 11.320885 5.757903 5.598124 4.932992 10.130699 11.602584 2.611054 13.747459 6.152435 7.399897 11.045393 11.857803 12.368572 6.891170 10.486702 9.922000 9.775970 11.800358 5.107487 8.798061 12.084478 11.432381 2.504137 10.379720 9.235205 NA 2.803702 9.313483 11.157957 9.318422 9.572719 15.202117 10.667507 10.342382 8.884525 1.388686 15.768827 9.901740 11.596905 10.377828 10.457896 9.159059 8.614279 10.320270 -0.2426500 -0.2426500 -0.0066432 -0.0237030 0.0000000 0.0702430 0.1333200 0.1389500 0.2073300 -0.7449900 -0.7449900 0.5364300 0.0655130 0.0619370 0.0607940 0.0895610 0.0895610 0.1284500 0.0957980 -0.7641500 -0.7276500 -0.1840800 -0.6976700 -0.6780200 0.1144800 -0.6440500 -0.2002500 -0.1743600 0.1813200 -0.2176300 -0.2426500 -0.6919700 0.0132130 0.3533200 0.0891270 0.0726320 0.0726320 0.1578600 0.9758500 0.1926900 0.1025300 0.0803120 -0.7582600 -0.7394100 -0.7394100 0.5770100 -0.2543100 0.0458490 0.0363230 0.1626500 0.0580810 0.1284500 0.1121300 0.1059800 -0.7380100 -0.6986600 -0.7551900 -0.6916000 -0.6976700 -0.6780200 -0.7374900 0.2145300 -0.1743600 0.1884400 0.1260900 -0.6859700 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.150 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.150 8.2955610 12.6214908 8.3621284 9.1335039 2.6110543 11.4982832 1.3886855 -1.1962770 8.8508316 8.3773550 -1.1962770 6.9174497 0.8037230 10.0699086 8.5569244 1.1256511 6.7285205 8.9304121 9.0468817 10.1868719 9.8454148 8.0204533 10.0076674 -0.1962770 8.9083064 9.3389830 3.6616926 0.3886855 9.7307449 1.6110779 12.3982656 12.0125517 8.0107222 9.3525297 8.6222898 9.1557513 1.6110779 0.8037230 NA 7.9885830 8.5485414 9.7180929 11.1140365 1.6110779 8.7704872 7.5850677 9.5702365 5.1435567 9.0867960 NA 10.5426444 1.3886855 2.2631246 10.0803323 5.7940961 2.3886580 9.1491130 8.0349288 10.4529638 NA 14.5187849 1.1256511 10.2641637 NA 6.3194084 4.5316310 7.9355646 8.3697618 13.471735 5.388672 9.058736 12.236380 10.016204 10.868787 13.320454 12.977775 9.381136 11.083318 13.015216 9.642124 8.790972 8.167843 2.504137 7.555252 11.813711 11.458791 6.722571 9.749152 9.296562 8.744755 11.104135 6.152435 9.084478 11.247687 6.598124 -0.196277 2.611054 7.909538 9.871142 9.949003 7.388670 9.099477 12.048963 5.125635 9.301560 10.005219 10.245614 9.902398 12.087953 9.714350 9.877849 9.972668 8.065497 4.826076 11.320885 5.901741 10.179833 10.130699 7.757904 13.622190 10.402691 11.017723 12.034779 9.938776 9.256978 NA TCGA-A8-A09Q 83 0 NA 761 breast stage iiib t4b n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 3 4 NA NA NA 1 3 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.42832e-06 7.284961e-07 11.4526262 7.0172405 7.0281282 11.5543604 NA 10.1790463 NA 10.0217869 11.7987322 8.4553178 9.1936274 7.9386304 8.9104649 9.2895046 4.5973345 8.2505206 9.7316243 9.5677926 7.5274348 4.9114471 10.0425194 10.0700002 12.5128125 10.5665483 9.7165583 10.6322473 6.6070521 10.6962139 -1.6121963 0.7098200 9.4445211 10.8572709 13.8724861 7.0917866 11.9709662 13.2092090 8.8452642 5.9424723 0.9728397 7.7823463 8.4005080 11.7299581 5.8473155 12.7705075 NA 10.1068444 13.2461559 0.9728397 9.4425419 11.4600161 7.5145878 6.9309147 2.0883112 12.9915150 12.6389960 1.8473155 8.6893795 0.9728397 5.7277326 10.0638405 10.2172097 9.9280115 11.2682323 10.7232738 9.4693669 1.7098200 11.2370931 9.9700255 5.4322780 7.7143128 2.5578022 11.0521085 14.9009942 8.8308061 11.8412827 10.9219431 8.2597885 -0.6121963 5.0743855 6.9989085 9.8088963 11.1591666 -1.6121963 7.6286745 7.0099350 9.3391681 11.0536634 8.5439664 7.5603107 5.7972750 10.1729271 11.5011373 0.9728397 13.8959258 4.7972724 7.2735802 11.3145501 11.2441144 12.8799870 6.9915094 10.8674111 10.1486034 9.8661778 11.4407911 4.8178330 8.3565501 12.5507468 12.5249546 -1.6121963 10.0554385 9.7081200 0.7098200 3.2463625 9.8691783 9.0943794 10.1847343 8.3864739 14.1963449 9.9643677 11.4957544 8.2947742 2.5578022 15.5802919 7.3906986 12.3126032 10.9709662 10.1225930 8.7940883 9.5331788 9.7545664 -0.0542860 0.4208300 0.4790700 0.9676100 0.9049200 -0.1741100 0.6636400 0.6831000 -0.3362900 0.2180600 -0.0579240 2.8625000 0.2133000 0.2133000 0.2262300 0.8055800 0.2259200 1.0063000 1.6333000 -0.5677300 0.0287630 0.0097276 0.0086135 -0.0655810 1.1221000 -0.0915520 0.4407100 0.4407100 0.0884160 -0.1218800 -0.0542860 -0.2864400 0.9426200 -0.0110600 -0.0761490 0.1695600 -0.2901100 -0.0395290 -0.6249300 -0.0604800 1.2009000 -0.5886300 -0.8541600 -0.3036900 -0.3036900 -0.3162200 -0.2892800 0.2133000 0.2695400 0.2262300 0.2259200 -0.2881000 -0.5725900 -0.5628800 -0.5691200 0.0287630 0.0000000 -0.5353100 -0.0189090 -0.0655810 -0.3001600 -0.1126000 0.4407100 -0.8657000 3.6569000 0.8882600 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.289 -0.289 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.289 -0.289 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 9.4905154 12.3683801 3.7802051 9.3252573 4.8473155 10.0303864 3.7454310 NA 8.5325418 7.9671992 NA 7.3685370 1.3878588 9.7694265 8.8737126 1.3878588 9.3565503 9.2620965 11.1488113 10.4099044 9.0311534 8.2176064 10.0922195 3.6732850 10.8326395 9.4693669 7.5653032 -1.6121963 10.5979459 0.7098200 13.6907365 12.0900561 7.2427521 8.8130994 7.9539374 9.5584345 7.5900076 2.0883112 -0.6121963 1.1952216 8.6570100 9.2834588 10.1749697 4.3420782 8.2500250 7.6893795 10.3274627 5.7715872 9.4878887 NA 10.4580044 4.2705289 3.5578144 10.0277804 7.4107507 7.7366116 8.8666530 10.2290547 9.3486095 -0.6121963 14.1613833 0.3879139 10.2731985 NA 8.6847998 4.5777068 7.9424723 8.7243900 13.678956 5.557808 8.480641 11.970966 9.437051 10.753932 12.770507 12.115910 9.310468 11.609286 12.819250 11.952033 9.808896 8.800453 -1.612196 8.139428 10.776977 10.6796297 6.2520693 8.5439664 8.7131889 8.9347780 9.9221815 7.3794052 5.9114447 10.5665483 6.5376300 0.3879139 3.7098089 7.6376371 10.6908079 10.2012638 9.1469393 9.0181507 16.6420678 7.7887627 9.9280115 10.3241533 10.9082566 9.8261555 10.1903998 9.4329605 0.7098200 8.8912023 6.9533281 8.2597885 11.0536634 6.6405486 10.6721292 10.1729271 7.7054091 14.3447814 10.1643165 10.6295687 12.1877721 9.9544133 9.3355203 3.6358124 TCGA-A8-A09R 82 0 NA 273 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 3 1 1 NA 1 4 1 2 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.110089e-06 2.42832e-07 11.3159456 3.3734255 6.8108364 11.0775268 1.6629346 10.9654728 -1.7963603 10.7966637 11.7511236 11.3928673 9.9729307 7.0769502 9.2642019 9.4172179 7.9583938 9.3353631 9.5084277 9.7363490 7.0583749 3.2034988 9.8232676 9.9164629 14.1437508 10.5831552 8.7657485 10.4923722 6.2035066 10.8399018 -1.7963603 -0.2115649 8.5915235 11.7616876 12.4850015 9.7187132 13.6022832 12.7697385 8.7270682 5.0236856 0.5254676 5.6873211 8.1591559 6.3633779 8.7378091 13.0152320 1.6629346 10.5425210 13.9078961 1.0108514 9.2540349 11.4723404 9.2581104 7.9449732 NA 14.5152154 12.4429756 5.9848650 8.4419109 0.2035144 4.5785463 10.1208782 10.4664817 10.0968076 10.6508477 10.1305433 9.7363490 0.2035144 11.6657527 10.3379324 6.0236856 8.6536863 3.2909699 7.9399083 15.1343820 9.4150781 11.3077772 12.5226842 8.7073319 1.2035144 6.5785448 9.0044059 9.3765585 10.8264730 NA 6.4275073 7.9946691 9.0661436 10.8945953 5.9583926 7.1013517 4.8182166 10.5706477 11.6768313 5.3430560 13.7236029 6.0172872 7.8383171 11.5526491 13.7468098 12.8581421 8.8246422 10.1904147 11.3074495 10.8480000 11.0624584 5.7192053 8.0800228 12.1769344 10.8585895 -1.7963603 10.4894861 9.3302106 2.3734255 2.5326411 9.5877501 10.1868560 10.3535706 9.4353273 15.1790406 10.7132811 10.2819905 7.8108364 5.8545568 14.6689928 7.7959630 12.0832808 10.4912185 10.8170654 8.7647940 8.8191358 11.1004307 -0.4260400 1.2418000 1.1864000 0.2287000 0.2101100 -0.4098100 0.4778700 -0.2227300 -0.2227300 1.8379000 -0.1451500 0.7836900 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.4385400 -0.0051227 -0.0165670 -0.0072379 0.6877500 0.0199230 1.0426000 1.0426000 1.0426000 0.0216030 0.0216030 0.0216030 0.4337800 -0.4260400 -0.4260400 -0.0019399 0.2287000 0.0523830 -0.4098100 0.4340200 0.4340200 -0.2227300 -0.2227300 -0.2227300 0.0441480 0.0087528 -0.6401000 -0.4023000 -0.4023000 0.0482620 0.0482620 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.0051227 -0.0034627 -0.0034627 0.0000000 -0.4298100 0.0199230 -0.4109100 -0.4264800 1.0426000 0.3124100 0.0216030 0.0216030 0.4337800 -0.4383200 -0.3985300 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.667 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.667 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 8.7103095 13.8632233 8.6433371 10.0513464 3.8137915 10.2516524 0.7884351 -1.7963603 8.2230967 8.5915235 NA 7.3595387 4.7113022 10.5313393 9.1957364 3.5254300 6.8328622 9.9470783 12.1725328 10.1793540 10.1961930 7.8237258 10.7013579 3.5254300 9.4975523 9.7363490 1.3734533 NA 11.2742979 1.5254174 11.5231782 11.6254394 8.2203145 10.5180893 8.6933542 9.1312841 7.7348877 3.0614824 0.2035144 5.2587903 8.4912186 8.6863139 9.4969778 2.1103967 9.7398213 6.6670306 9.7875289 6.7152592 10.1518733 NA 11.0892024 3.5254300 6.4702928 9.1522237 6.9112446 4.0614911 9.5952868 8.7561753 6.0044070 1.2035144 12.8445417 0.7884351 10.2560741 NA 8.5731033 2.5254425 8.4359269 9.1118988 13.364008 6.561059 8.262850 13.602283 9.856454 10.785883 13.015232 12.931852 8.650589 11.043694 13.341858 8.903079 9.376558 8.640217 -1.796360 7.827388 12.741756 11.3540467 7.7523278 8.4538044 8.6649855 9.7348876 10.3826501 7.5936750 7.6065177 10.5831552 7.0108615 2.7270709 8.9633944 7.6133423 11.2408814 10.3269808 8.5388962 9.2628505 11.6505893 6.0427100 10.0968076 10.0669180 11.4166103 9.6396970 10.7542528 9.5333025 -0.7966109 9.2041258 6.9449732 5.1342415 10.8945953 8.5422426 10.4238844 10.5706477 7.7506896 12.4094520 9.7265779 9.6716210 12.9647976 9.9483399 10.1850734 1.2035144 TCGA-A8-A09T 68 0 NA 579 breast stage x t1c n0 mx 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 5 5 2 NA NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 5.562279e-08 10.6856359 3.2378696 7.9243642 11.3884573 0.6528765 10.5888030 NA 10.0203161 11.2935982 7.2822582 9.4489410 7.0366055 8.2565276 8.8178084 7.4077887 8.5954160 9.7535636 9.4505628 7.1606964 NA 9.8623547 8.9220280 8.6613299 10.3833714 9.1939979 10.4342610 3.5597977 10.5522507 2.9748230 3.1123332 6.9008294 10.8290745 12.4104997 6.2967584 12.6136273 13.0656035 9.6641287 5.1123332 NA 4.7403663 8.1842828 9.3602605 6.5477197 13.0208620 5.0104531 10.8972652 12.8292303 7.4602560 9.4620906 10.8070866 5.1123332 5.6529023 NA 13.1041008 11.8144426 1.2378696 7.5046506 NA 3.3533374 9.2094073 10.2740374 10.5101048 7.1286347 9.6669218 8.8936926 0.6528765 10.9966423 9.3217863 6.9748298 8.1725375 9.9849379 11.3662878 13.8606783 7.8914970 11.5976134 11.2908846 9.1666288 NA 2.4602445 7.8278273 8.9102892 11.8430346 NA 5.5597916 6.7189904 10.1842828 10.0027354 5.2074907 5.5836394 5.2676107 10.6222879 11.5435456 0.6528765 13.7083532 7.0707542 7.5294181 12.0470960 13.3747482 12.9301887 7.4210853 10.1920601 11.2194311 10.9608022 10.5522582 4.0452158 8.9543976 12.2831684 11.1230518 NA 10.2639261 9.4243908 NA NA 8.8402533 10.9161705 10.4186018 8.6918203 14.7805733 9.8538000 10.3463883 7.2822582 -0.3470317 15.0009378 8.5567831 12.3617697 12.2437223 9.5865919 9.2132343 8.4375361 9.6564333 0.0171240 0.0171240 0.0171240 0.0186630 0.0035368 0.0000000 0.0111210 -0.3339900 -0.3433600 -1.0488000 -1.0488000 0.9700800 0.0349590 0.0239100 -0.3034100 -0.3034100 -0.3034100 0.0484040 0.0157270 0.0295700 0.0189430 0.0207630 0.0404680 0.0404680 0.0404680 0.0311550 0.0311550 0.0311550 0.0620800 0.0363700 0.0171240 -0.2957900 0.0111210 0.0315770 -0.0015243 -1.2929000 0.0174040 -0.3339900 -0.3339900 -0.3269300 -0.0066432 -0.0055375 -1.0805000 -0.3021600 -0.3021600 -0.3021600 -0.3021600 -0.2921300 -0.2639600 -0.3034100 -0.2963800 -0.7457700 0.0157270 0.0157270 -0.0047079 0.0189430 0.0041205 -0.7177400 0.0404680 0.0404680 0.0221640 0.0146090 0.0311550 0.0512450 -0.0063668 -0.7008200 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -0.079 0.970 -0.302 -0.302 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -0.079 0.970 -0.302 -0.302 0.000 8.4698848 13.2831685 11.1336915 8.7509334 2.9442025 9.8972652 NA NA 7.5836387 8.0958448 NA 7.0875297 3.1123332 10.4334411 9.2036480 NA 5.6529023 8.8228264 10.2237057 10.5062109 9.2602687 7.3533409 10.2877124 3.8228219 9.9008288 8.8936926 5.6070965 NA 10.1968997 2.8228321 13.1157870 12.0838765 6.6415865 10.1347007 7.9838185 9.2284407 5.0452202 NA NA 8.5657906 9.3842204 9.2676112 10.0071508 2.4602445 7.4616726 6.1447541 10.9938641 6.8026482 9.3825220 -0.3470317 9.2546722 NA 3.3533374 9.6269717 5.7926576 1.2378696 9.6358949 7.2074898 3.3533374 2.2378696 13.9338895 0.6528765 9.8152927 NA 8.3909935 2.8228321 8.1326817 8.7350503 12.899373 4.862357 8.610003 12.613627 10.168601 10.549234 13.020862 12.294953 8.864790 10.973138 12.739038 8.737710 8.910289 8.180378 NA 7.332381 11.146757 10.623726 6.434261 8.871997 9.215144 8.900615 9.738931 6.832810 2.237870 10.383371 6.267611 4.353344 6.407790 5.128636 10.775729 9.835296 8.935990 8.647255 11.047900 1.974823 10.510105 10.576229 11.188663 9.595416 9.879314 9.032280 NA 8.740921 7.010453 2.822832 10.002735 7.641586 9.867221 10.622288 6.010453 14.239682 10.579939 10.243488 12.656946 10.820319 8.986057 NA TCGA-A8-A09V 51 0 NA 457 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 56.63.0 5 5 2 NA NA NA 1 4 NA NA NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 10.4157006 6.6918398 8.2286864 11.2939662 0.7222037 11.1811328 1.3071953 10.3184033 12.2860454 12.4426003 10.1294814 8.3454855 9.7765918 8.6200589 8.8677211 9.2825464 10.9492278 9.7033051 7.1761702 NA 11.6919598 9.4865324 9.7574709 7.8736533 9.8510672 10.8270307 2.5966728 11.2748811 NA 5.8514967 8.0441416 12.0277054 12.9531347 6.2665336 12.6373460 14.2192753 8.6301058 8.0987006 5.4226535 6.4636813 8.6947148 10.3964058 8.1938890 13.4785961 5.9890005 10.5276888 13.6528277 6.4364584 9.5295953 10.9860696 7.8668715 5.0076171 -1.8624965 12.6702370 10.4107407 3.5295711 8.6657051 -0.8627588 5.0198931 10.3539970 10.5268824 10.9762579 13.2930180 10.7822339 9.6375950 6.5760429 12.0990625 10.6710675 7.8938075 8.2613724 12.0801321 12.7119037 14.7340669 9.3239658 12.2049375 12.0249477 7.9054351 2.8376809 2.3851825 8.6230804 9.4804368 12.4783529 0.4592218 5.1596171 6.7918870 9.8407221 11.0874424 10.3224362 5.6129835 4.6608146 9.9546344 12.5535868 0.7222037 12.6511020 6.7108987 8.3046694 13.1520562 12.7697352 13.4661363 8.4341674 9.5982189 11.3495954 11.4742066 11.9313623 5.7883020 8.5635159 12.8051388 11.9485254 -0.8627588 10.2260393 9.0950786 0.7222037 4.4783441 10.8428835 10.8357387 11.1582310 9.2067008 14.1143297 10.6403314 10.5632537 10.3990522 2.5966728 15.7466896 7.4226535 12.9909992 12.1064577 10.0369856 10.0676188 8.5635159 11.1125420 0.00402430 1.26050000 1.26050000 0.00055459 0.00041593 -0.00055444 -0.00360110 -0.00691950 -0.00691950 0.00000000 0.00000000 0.00000000 0.00416320 0.00416320 0.00249690 0.00249690 0.00249690 -0.00387790 -0.00387790 0.00583090 0.00013863 -0.00110870 -0.01147300 -0.01147300 -0.01147300 -0.01986300 -0.01986300 -0.01986300 0.00541390 -0.01146600 0.00402430 -0.00207840 -0.73530000 -0.00055444 -0.00055444 -0.00360110 -0.00360110 -0.00691950 -0.00691950 -0.00691950 0.00110930 0.00110930 0.00084678 0.00485790 0.00485790 0.00485790 -0.00325840 0.00416320 0.00777830 0.00638710 0.00249690 -0.00387790 -0.00387790 -0.00387790 -0.03272300 0.00013863 -0.00110870 -0.73512000 -0.01147300 -0.01147300 0.00736090 -0.01986300 -0.01986300 0.00541390 0.00360760 -0.00249380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5561577 12.8131530 6.7222133 9.5827833 3.3851825 10.4526837 0.9446336 -0.8627588 8.3491392 7.3246027 -1.8624965 8.2223250 1.9445961 9.6671696 9.5889773 2.6608146 9.1287728 9.5471724 10.4779357 9.1001472 9.9628260 9.0463942 10.0892643 3.4947996 10.8958907 9.6375950 2.7811079 -1.8624965 10.0568593 4.1372494 12.3349285 11.5008383 7.5166298 10.6074015 7.7278381 8.7052073 4.5295711 -1.8624965 2.6608146 3.2247195 9.1173906 8.9169704 10.5236525 2.5295711 7.3861513 4.1816433 10.5101161 6.7033056 9.4603058 NA 12.2465104 3.4226501 5.7883020 9.6869347 5.0501403 4.4410319 9.3606496 7.3851782 6.3612525 -1.8624965 13.3873274 0.7222037 9.9823491 NA 7.9120378 5.6291030 7.9120378 8.2587846 12.518895 3.596685 8.345486 12.637346 10.492877 10.437890 13.478596 14.027183 9.358234 11.401400 13.215444 9.366671 9.480437 9.297122 2.995231 8.203340 12.554378 11.1037565 8.6220738 9.1999719 8.9004635 9.1273550 10.9402581 6.1925335 7.2844558 7.8736533 6.8237519 5.8921384 8.1130988 6.6521624 12.4575580 10.2847740 7.1344304 8.0501403 14.2902092 6.2194009 10.9762579 10.4327330 12.1759986 9.0724162 10.8285584 9.7175097 -0.2777089 9.2225377 6.9606183 6.1202441 11.0874424 8.3816148 10.6876540 9.9546344 8.0665984 13.7488811 9.7860580 10.2411945 12.8211778 10.5564213 10.9282104 0.7222037 TCGA-A8-A09W 70 0 NA 30 breast stage iiib t2 n3 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 6 3 1 NA 2 4 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 7 5 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 5 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803895e-06 4.85664e-07 11.4039270 6.6470281 6.7629706 11.0234494 -0.2537732 10.6333826 -0.2537732 9.8041536 10.8831531 5.7795854 8.7531893 6.7291557 8.7768291 8.6349050 7.3045822 9.8514158 8.0176252 8.2814372 6.8336251 3.0680860 7.9797819 8.3122159 7.2299782 10.0373327 9.8831531 10.4163756 5.3608734 9.9665040 NA 1.3311319 8.7685297 11.1574081 11.8061485 8.4740823 12.8393319 13.7090580 9.4088303 4.4466003 -0.2537732 6.4808710 8.0926758 9.6864755 6.3386187 12.8141844 2.6530600 11.2792483 12.7654052 5.5916525 9.8135964 11.0260627 5.5790534 6.7291557 2.5535080 13.2009143 11.4725930 2.2055802 7.4774806 1.7461408 5.5010506 9.4960315 10.3640886 9.8494498 9.8395795 9.8169537 8.6103479 1.0681205 10.5703252 9.1438365 3.8336289 8.4638382 NA 10.2760805 13.6598929 8.6524363 11.4848876 11.1870311 8.9335139 -0.2537732 3.3900210 7.8728663 8.9482857 10.7847381 1.3311319 6.4943548 6.7061644 8.9641196 10.9848652 5.1212019 5.9749812 4.6768992 8.9273143 11.8595786 3.0680860 13.7406038 4.3608699 6.2618617 11.2860478 12.9838948 12.8788223 7.3718707 11.3507152 10.2208819 9.5365105 10.3278333 4.1037158 8.6149844 11.2124934 7.8336251 6.5209486 9.6149846 10.1629595 NA NA 9.2350063 11.7572145 10.1844340 7.9917146 14.7890183 10.5422015 10.9138937 7.1555529 2.9160944 14.5174967 9.9098116 11.7211142 11.1587318 9.2755926 9.0453701 8.2697237 10.1342546 0.4498600 0.6562700 0.6899900 0.1451800 -0.0073339 0.0000000 0.0034687 -0.0310860 -0.7429900 -0.0103700 -0.0103700 1.4328000 0.0025021 0.0645110 -0.0308380 0.1670000 0.1670000 0.0052749 0.0076392 0.0026357 0.6606900 -0.7291400 -0.0681270 -0.0681270 1.8024000 -0.0033243 -0.0033243 -0.0135530 0.0144700 -0.7385400 -0.0806740 -0.0247980 0.0087528 0.0151680 -0.0436020 0.0034687 0.0034687 -0.0310860 -0.7429900 -0.0242510 0.7368200 -0.7282600 0.7077600 -0.7366100 -0.7366100 0.0043021 0.7239500 0.0645110 1.3533000 -0.0308380 -0.7508000 -0.7290600 0.0076392 0.0076392 -0.7295800 -0.0549600 0.0153080 -0.7271200 -0.0681270 -0.0681270 -0.0417020 -0.0404800 -0.0033243 -0.7465500 0.0265140 -0.7337200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.716 -0.737 0.000 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.716 -0.737 0.000 0.265 8.0129485 12.0606036 3.6041425 8.9905258 4.0680860 9.4604076 -1.2539453 NA 7.8625059 5.9845666 NA 7.5010498 0.3311319 10.3627109 8.8494498 2.5535080 8.0499427 9.4595484 9.0129485 11.6120885 9.4011560 6.9988273 10.7823356 1.9160944 8.7119464 8.6103479 6.5077138 NA 10.9091826 -1.2539453 12.2306073 12.0872638 8.0567748 8.3141182 9.2814375 9.7580881 8.5043852 1.0681205 -1.2539453 2.9940909 8.8149403 9.4706758 11.3000312 4.5275208 4.7461623 6.8651035 10.3534922 6.9009803 10.7549407 NA 10.2096863 -0.2537732 3.7905531 8.9000432 6.9032564 3.4466003 8.4740823 9.7775185 6.2380149 NA 13.7943934 NA 10.0035498 NA 7.4638382 5.4604084 7.8309702 9.7713016 9.675420 7.129866 8.927314 12.839332 10.060745 11.360182 12.814184 9.404374 8.965331 10.892731 12.719770 9.506050 8.948286 7.974981 NA 8.800088 11.085177 11.233500 5.906034 8.682800 8.902245 9.111391 10.380133 6.012949 6.880589 10.037333 6.670975 2.653060 3.875446 6.942395 11.807533 10.625745 8.806858 9.093783 12.409831 4.790558 9.849450 10.545444 11.204312 9.161904 11.304344 8.808208 NA 8.700983 7.587318 3.916085 10.984865 7.415047 10.228133 8.927314 7.706164 13.711631 9.924204 10.881871 12.169934 9.676160 9.812251 2.994091 TCGA-A8-A09X 62 1 426 NA breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 6 3 2 NA 1 4 2 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.283541e-06 3.815932e-07 11.911784 4.585509 6.798991 10.968916 0.312549 9.822926 NA 9.987272 11.364607 7.970703 8.744337 7.541310 7.998992 10.776016 3.727528 9.502316 9.033591 9.296435 7.293583 4.610174 10.359161 11.584538 8.176677 10.197171 9.414029 10.488665 7.701943 9.853575 NA 2.186976 9.271527 10.582397 12.514921 7.304957 12.677264 13.357796 10.125738 7.475722 5.297386 4.877278 8.333008 8.538100 6.777378 12.149462 1.534908 10.655677 11.560221 5.441776 9.487517 11.162418 6.912404 7.124134 -1.272297 13.714550 12.617793 2.727528 8.304958 NA 5.946698 9.889920 11.071270 9.168398 10.256471 9.863238 9.634419 1.534908 11.759575 10.021575 6.622346 8.168398 4.681725 7.585510 15.181394 8.075084 11.704809 10.367774 8.312491 1.534908 1.534908 7.195134 8.735957 11.760263 NA 5.067381 7.591715 9.670776 10.180285 4.049457 7.389307 6.145382 10.092758 12.071686 1.049491 13.596303 3.427968 5.975456 10.647882 14.152318 12.618553 6.186960 10.518692 10.369129 9.397061 10.742944 5.012931 9.736658 11.099850 6.867080 NA 10.537297 9.661957 1.727528 1.727528 9.938200 10.965635 9.874097 8.576152 15.360652 9.930265 9.638921 7.053958 3.814991 14.887932 10.066265 12.088102 11.101481 9.818303 9.087279 8.227375 9.578864 -0.2791800 0.0086135 -0.1069900 0.2174500 -0.0320410 -0.1146200 0.2285400 -0.0176660 -0.0346810 0.2111500 0.2111500 0.2111500 0.2179100 0.4651900 -0.0241140 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.1652000 0.2189600 -0.0085766 0.2220600 -0.2931900 0.2384500 -0.0468540 -0.0468540 -0.0468540 -0.0077482 0.0075000 -0.2791800 -0.0184900 -0.3148200 -0.1131200 -0.1154300 0.3361000 0.2520600 -0.0176660 -0.0346810 0.4875100 0.2172900 0.2162200 0.2111500 0.2180600 0.2180600 0.2180600 0.2180600 -0.0302670 -0.0165220 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.4080400 -0.1652000 0.2189600 0.0000000 -0.3048700 -0.2946100 -0.2931900 -0.3347300 -0.0468540 -0.0468540 -0.0201360 0.2117700 0.1190200 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.077 0.218 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.077 0.218 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 9.4948858 12.5647625 2.8974534 8.8911786 4.0136677 10.6897019 3.8149913 NA 9.1930953 7.1241337 NA 8.0718914 2.1869759 10.3082585 9.0335907 2.7275284 8.4656211 8.8399684 9.6215887 11.5934554 9.9528809 7.2666872 11.1363892 3.3903100 7.2471652 9.6344194 4.6344190 NA 9.9748630 2.3124909 13.9178937 12.2200080 7.7882250 9.4357505 8.9860949 9.6246180 4.9754559 3.4279681 1.0494914 4.7498989 8.2878615 9.8924358 9.5667326 3.3713916 8.1725435 9.4061289 9.8016704 6.9943150 9.7841666 NA 9.7140820 4.8149913 4.0494565 9.8575781 5.5725168 7.3459144 9.1787400 9.6449009 8.8399684 1.0494914 15.0054155 0.7275284 10.6265080 NA 7.3641530 5.7936176 7.1411569 9.5113457 12.129639 7.071825 8.836053 12.677264 10.333934 11.417090 12.149462 8.647882 9.137980 10.875052 12.777462 11.017548 8.735957 6.211345 3.814991 7.790924 10.195644 11.293821 7.566733 8.672973 9.503962 8.329299 10.796562 7.713371 8.166321 10.197171 7.304957 1.312491 2.049457 8.129454 11.676079 11.113930 8.816317 8.443491 10.353694 8.371385 9.168398 10.764733 11.650113 10.097126 10.895574 8.830817 NA 10.318336 6.634419 7.970703 10.180285 7.941848 10.766791 10.092758 7.239282 14.292631 10.972784 10.905882 12.220759 10.861313 9.385740 3.856816 TCGA-A8-A09Z 83 0 NA 0 breast stage iib t3 n0 m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 3 1 2 NA 1 4 1 2 3 1 NA NA 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 4 0 0 6 1 0 0 0 0 0 4 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 4 0 6 0 0 0 0 4 0 4 0 0 0 0 0 2 6 0 0 0 0 4 0 1 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 2 0 0 6 0 0 1 0 0 0 0 0 0 0 0 2 6 0 0 4 0 1 0 0 1 6 0 0 0 0 4 7 6 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 6 0 0 0 0 6 0 0 4 0 0 0 0 6 4 1 0 0 0 4 0 4 0 7 0 0 0 0 4 0 0 0 0 0 2.258285e-05 6.730357e-06 11.25963741 1.97298668 7.06813228 11.95855790 -1.48640819 9.40532679 0.09855431 10.28214091 12.16100147 8.28832995 9.06043763 7.63248417 9.35981697 10.99836597 2.32088898 8.94712844 11.57221130 9.23293196 5.62206647 3.64282863 9.98216707 10.60001100 11.98293049 10.17843467 9.29244151 9.88423052 7.41440956 9.27758521 NA -1.48640819 7.21051063 10.65660729 12.62524930 5.47932758 13.41761313 13.88871826 9.71260180 7.57693777 5.39618690 5.09850378 7.54696621 12.57676957 3.26843439 11.95609783 0.51359181 9.11066443 14.39468091 -1.48640819 9.83993881 9.79199244 1.68347189 7.16817868 0.51359181 16.90433618 10.85584273 1.51354128 9.03808467 NA 4.62206940 9.64347004 9.48076940 9.07578557 11.61453382 10.51811463 10.65085447 5.47932758 10.88531971 9.84669843 8.27009953 8.58500533 -0.48640819 10.53174326 16.07111893 8.01183384 11.12986217 10.85311474 9.43835544 0.09855431 6.40836031 7.48508624 9.46482773 9.02331801 NA 5.02133758 7.75671709 9.78558962 9.76384144 3.09850378 7.18596860 5.03710543 10.30470588 10.90317441 5.39618690 12.80593659 6.51354286 7.17887894 10.72147246 9.12179794 12.48508659 6.08339848 10.42718051 9.72116756 8.42447034 11.60563947 5.33372069 8.38852451 11.19478147 12.18442056 -0.48640819 10.76443358 8.36529229 NA 1.48625099 9.98572612 11.03317932 10.16593994 8.47932718 15.02031549 10.69033948 9.93560781 6.78966796 -1.48640819 14.51936494 1.09848693 12.51451132 11.24358852 9.04102006 8.36216608 7.19302359 10.79932380 0.01228800 0.77220000 0.79537000 0.02361800 -0.00230410 0.00741230 -0.00202720 -0.00811140 -0.00811140 0.00000000 0.00000000 0.00000000 0.02530200 0.02239200 0.00827780 -0.00030116 -0.00030116 -0.01293800 -0.01293800 -0.00728280 0.00894340 0.03081400 0.00922200 0.00922200 0.00922200 -0.00091897 -0.00091897 -0.03390000 0.03614000 0.01228800 0.01228800 -0.01087100 -0.84472000 0.00741230 -0.02173300 -0.00202720 0.76991000 -0.00811140 -0.00811140 -0.00811140 0.00018986 0.00018986 0.00000000 0.01429700 0.01429700 0.01429700 0.02081500 0.02239200 0.02239200 0.01284600 -0.00030116 -0.01293800 -0.01293800 -0.82738000 -0.00728280 0.00894340 0.06785800 -0.82372000 0.00922200 0.00922200 -0.83370000 -0.00091897 -0.03390000 0.03614000 0.00924630 0.05884700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.97910961 11.04735946 NA 8.01538048 4.63455842 11.96165935 -1.48640819 NA 8.22434952 6.28172792 NA 6.02133758 -0.48640819 9.95804036 9.11624180 1.32088898 7.00939756 7.37772937 8.48939120 11.00088063 10.29526752 7.95025435 10.09474357 1.83547948 6.97706694 10.65085447 -1.48640819 NA 10.64732746 2.60100709 13.01637484 13.15582042 6.06043655 10.19609872 8.04102006 9.70583591 5.42043524 2.32088898 0.83543905 6.37152401 8.63118615 10.84137635 10.45385665 1.32088898 6.85174405 7.58500533 10.65692623 5.56882561 9.47932738 NA 10.06525132 3.42042850 2.97296830 9.60988273 6.15675053 NA 9.15288385 8.27009953 4.29490007 -1.48640819 13.82717012 0.09855431 10.31403858 NA 4.72299601 3.68347189 7.55520187 9.97808878 8.1118561 3.0985038 8.1592013 13.4176131 10.7414597 10.4215603 11.9560978 12.7435635 9.4597183 10.8138155 13.3765678 11.1567228 9.4648277 9.1555947 -0.4864082 7.6530944 11.0695701 10.45165241 7.93139527 10.60332452 7.75194769 7.74716246 9.45357026 6.94399515 8.53313386 10.17843467 7.43240660 NA 0.51359181 8.28447110 8.72177730 9.77681216 6.76620820 8.42043356 11.89440990 4.90586111 9.07578557 10.29449290 10.66582790 10.69841836 10.92187277 9.75373806 -1.48640819 9.58868784 6.17175526 3.37153098 9.76384144 4.57963273 11.30897394 10.30470588 8.82537097 13.44898437 10.47173323 11.27613272 13.21165081 9.89021107 9.68158824 0.09855431 TCGA-A8-A0A1 84 0 NA 365 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 5 2 2 NA NA NA 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.39057e-07 10.824763876 7.927623316 7.844986274 11.081595747 0.005759269 10.682180249 -0.994240731 10.446651490 11.938919714 9.856750449 9.952688692 7.436235145 8.320931841 8.714866087 8.352295958 9.723458731 10.583683233 9.350078168 7.469306438 5.529343092 10.614037196 9.798572568 8.448725888 10.562288414 9.065126893 10.378103315 7.145334061 10.684822506 NA 1.590721770 9.690530937 11.839660700 12.315684981 7.541057885 12.567666913 13.108988194 9.854405275 5.560372579 3.253717034 5.773967323 8.220101613 10.007190595 7.649638450 13.023373742 1.005759269 11.140208665 13.992690976 5.787142496 9.719392244 10.284231867 9.073216664 4.678207151 -0.994240731 14.193155307 11.145611865 2.005795193 7.851272436 NA 4.291183595 9.989488595 10.300403128 10.492114561 11.366080761 10.300403128 9.936519721 1.327687364 10.917548788 10.096556383 6.155528651 8.583211043 1.327687364 11.067491032 14.805443419 8.569817642 11.759208068 11.403724298 9.323194856 -0.994240731 3.863760084 8.866869352 9.384077228 11.967232060 NA 6.175708220 6.663993515 9.566115133 11.182578838 4.888426673 7.165653718 5.678207151 10.342288945 11.857531404 NA 13.619168963 6.244186847 7.692282815 12.439367802 12.342009951 12.796945249 7.863763181 9.025372978 10.832728018 10.386422010 11.503634210 5.432047416 8.135065380 11.939104163 9.826758997 NA 10.333896303 8.914174917 1.005759269 2.300035842 10.071198470 10.536676366 10.196841593 9.189417632 14.830045026 9.726026696 9.963609948 9.570884490 1.590721770 15.761569692 9.636049422 13.149165559 10.925762929 10.012108400 9.444574105 8.406661663 10.871763040 -0.00636680 0.84179000 0.83711000 -0.00539510 -0.01243800 0.00180300 0.24156000 0.00527490 -0.00249380 -0.00498440 -0.00498440 -0.00498440 0.00152550 0.00152550 0.21622000 0.20916000 0.20916000 0.16205000 0.17091000 -0.00443120 0.00000000 0.00723540 -0.00830050 -0.00830050 -0.00830050 -0.01656700 -0.01656700 -0.02675500 0.25683000 0.00444110 -0.64499000 -0.00222300 0.00194180 0.00180300 0.00039394 0.23473000 0.23295000 0.00527490 -0.00249380 -0.00249380 0.24047000 -0.64523000 -0.00498440 -0.00055444 -0.00055444 -0.00055444 -0.00790610 0.00152550 0.00819590 0.21622000 -0.63840000 0.16205000 0.17091000 0.19131000 -0.00443120 0.00000000 0.00569190 -0.64443000 -0.00830050 -0.00830050 -0.00069303 -0.01656700 -0.02675500 0.24018000 -0.00698830 -0.02384000 0.000 0.000 -0.422 -0.638 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.422 -0.638 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 9.5459105 13.1498829 3.5907457 10.1162657 8.7068983 10.0759033 NA 0.5907218 7.5214819 7.9006000 NA 7.0673967 4.3633323 10.2719833 9.1517145 -0.9942407 9.6223312 8.7044871 10.2519291 9.6622073 9.7323581 8.2394019 10.5584514 3.2911910 8.3322120 9.9365197 2.5907457 0.5907218 10.4294236 2.1757162 11.7743802 11.7268815 7.8853657 10.4018519 8.9201676 8.8227658 5.0057817 2.7062211 1.8131552 6.2441868 8.5603711 9.9628844 9.3231949 4.8386745 6.3366994 5.2911836 10.3095631 6.5135776 9.4299486 NA 10.7997920 3.5293462 4.0501795 8.9450824 5.5251042 NA 8.8001981 10.1894178 4.5907457 NA 13.6850425 -0.9942407 10.0336884 NA 7.6922828 2.1757162 7.6639935 8.5352128 13.449827 4.678207 8.050176 12.567667 10.523944 10.742184 13.023374 12.453382 9.365532 11.036105 12.999782 9.107758 9.384077 9.166914 1.590722 7.477458 11.178210 10.987350 7.816354 9.110381 8.535213 9.186935 10.170501 7.809913 8.263170 10.562288 6.234601 2.005795 5.560373 7.315077 11.715082 10.629207 7.263171 8.142773 13.778045 6.253709 10.492115 10.589335 11.618651 9.742184 10.862208 8.735403 NA 9.278179 9.296181 3.005777 11.182579 7.135065 10.413581 10.342289 7.150441 13.089760 10.133777 10.149803 12.828751 10.101839 10.037139 NA TCGA-A8-A0A2 66 0 NA 579 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 56.63.0 5 2 3 NA NA NA 1 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 3.059253e-07 11.0288595 4.5606416 8.0460697 11.6426588 0.2386646 10.7032604 1.2387257 10.3010982 12.2273107 12.5512432 10.3852834 7.9986028 9.7913838 10.4566724 6.9322018 8.5241170 10.6280772 9.3776264 7.1152320 0.2386646 11.4373132 10.0492863 12.9375821 10.6845056 9.4578832 10.5888252 5.7856081 10.6699433 0.2386646 1.2387257 8.0298774 11.0706157 12.8746595 6.3782654 12.8790161 13.9754866 8.7904231 6.9632290 5.2499421 6.0652642 8.8133082 9.1575778 7.6878634 13.3029523 1.2387257 9.7144482 14.0889748 4.8680694 9.2941532 11.3713751 6.0331300 6.7504672 NA 13.6031842 11.9003459 4.0966920 9.0716047 NA 5.1090805 10.1113896 10.8476626 9.6240378 12.2290847 10.6307637 9.8861732 2.8236678 11.3153633 10.6978901 6.2610832 8.0779186 2.3261634 11.7933036 15.2022656 7.6972442 10.0460696 11.3686417 8.1090795 -0.1762506 2.0460719 7.8180306 9.0143249 11.4064465 -0.1762506 5.7856081 6.7933042 10.2295278 9.5066718 4.6137556 6.3101765 3.9391513 10.2523863 12.2773766 -0.1762506 13.8565265 5.5606416 7.7385605 12.4715853 12.4692606 13.1450886 7.3654196 10.0896829 11.0298776 10.9111865 11.5910341 5.3261778 8.6148401 12.9366597 12.8902149 NA 10.2929799 9.3808219 1.5606660 4.7715000 10.5617695 9.7275591 9.8194443 8.9835486 15.0201385 10.4618114 10.3165318 9.7918640 2.6310344 16.8395859 9.3446233 13.0465727 11.8296526 10.1808627 9.7205141 9.3195324 10.6398263 -0.3297600 0.4385100 0.9994500 0.0022932 0.0012481 -0.0163810 0.0833420 0.0181030 -0.0090478 0.4513900 0.4513900 0.4081300 0.0259520 0.0216340 -0.3547600 -0.3547600 -0.3547600 0.0000000 0.0000000 -0.6754500 0.3320500 0.0458490 -0.7472500 -0.7511500 0.0445740 0.0555150 0.0555150 0.0555150 0.0907200 -0.2955600 -0.3297600 -0.2679300 0.0022932 0.0143300 -0.0127130 0.0833420 0.0833420 0.0181030 -0.0090478 -0.0090478 0.3757800 -0.7680000 0.4513900 -0.3211200 -0.3211200 -0.3211200 -0.2721200 -1.2464000 0.0894160 -0.3547600 -0.3547600 0.0000000 0.0000000 0.0000000 -0.6733400 0.2801000 0.0458490 -0.7491600 -0.7483500 0.0445740 -0.2823900 0.0555150 0.0555150 -0.2941400 -0.3947500 -1.0972000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 8.9084857 12.7328828 8.4420627 10.0684374 2.5990797 11.2518629 1.8236678 -1.7612131 8.9977706 7.8293016 NA 7.6438562 1.0460719 9.6597277 9.7831962 1.8236678 7.9700340 8.8843732 12.9044947 9.9159939 9.9319272 8.7942625 9.9615222 4.4285377 9.3705717 9.8861732 1.5606660 NA 10.6942989 2.6981518 12.1643619 11.6295554 7.4359311 10.3644511 8.0282481 9.3041309 4.9111403 -1.7612131 2.3261634 0.5606171 8.7022392 9.1943646 10.1819621 2.6310344 6.3628363 5.7700969 10.8159075 5.3884617 9.7831962 -0.7612131 11.1086941 2.8236678 5.2721389 9.7742720 5.9686760 6.5379235 9.2450409 8.1635274 8.3705719 -0.7612131 13.7962383 0.5606171 10.1263161 NA 6.4866420 5.3576540 8.1885414 7.7365663 12.943472 4.121355 8.796179 12.879016 9.762767 10.828834 13.302952 12.788499 8.858559 10.921490 13.377906 10.869209 9.014325 8.660780 NA 8.234482 11.337734 10.982077 8.367998 8.870792 7.726555 8.167973 10.145440 7.285839 5.006899 10.684506 6.823677 4.853427 3.853427 6.440495 10.571311 9.851122 7.762276 8.119829 12.748984 7.956391 9.624038 10.673604 12.445958 8.773990 10.573267 8.912907 8.612667 9.531859 7.323151 7.664980 9.506672 7.362836 10.407732 10.252386 7.556195 13.982547 9.745518 10.094751 12.678740 10.684247 10.362513 3.524114 TCGA-A8-A0A4 73 0 NA 396 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 2 2 1 NA 3 4 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 1.946798e-07 12.1924864 8.1530473 5.9798104 12.1223921 2.3848511 10.2987498 NA 10.4527455 12.0793661 11.0742788 9.3477591 8.3506475 9.7656849 9.5672574 7.6359510 9.0945214 10.9269276 9.0430746 7.7335909 1.9698228 10.8233085 10.0026367 11.5130723 11.4012072 9.6192813 10.8069278 4.7306400 10.7446126 NA 2.2593328 8.9304712 12.2290458 12.5171486 8.1574525 13.1991118 12.6036281 10.1127835 7.0572889 4.8222662 7.2877410 9.2209135 10.6394981 8.3116534 12.6000927 -1.2002495 10.2050420 13.4916986 7.5107072 9.6130564 11.1184434 7.8139210 7.8847090 -0.2000838 13.8093575 11.4586097 2.7067957 8.2997465 -0.2000838 5.7999007 9.9547188 9.9432839 9.0454533 11.5865786 9.6764176 9.7112925 2.1218443 11.1833349 10.3928247 7.3998137 7.6916842 10.4269785 11.3434158 14.9299482 9.0761414 11.2992482 11.3501664 7.8740420 2.1218443 4.1218277 8.6327906 9.3116532 13.2328339 NA 4.2261617 6.6072548 10.5003403 11.1237998 5.2593328 4.1574561 2.7998955 10.3062082 12.1547009 1.3848787 13.0798013 5.7540965 7.2997465 11.7293439 10.0269148 12.9661422 7.0478285 9.7707255 10.8477062 10.6866755 11.9499652 5.2261655 8.5055329 11.7322999 12.5630092 -0.2000838 10.4942585 9.1684071 1.6072474 4.0501011 9.8747111 10.1347325 9.9578791 8.7942540 15.2960210 10.6875020 9.9717029 9.1662228 8.7885852 14.5659118 9.4536414 12.9876393 11.7974329 10.2756340 10.1981098 8.5796199 10.8800119 -0.6354700 0.3259100 0.0195730 0.0043021 -0.0023553 0.0033299 0.6476300 0.0022193 -0.6363200 -0.0041546 -0.0041546 -0.0041546 0.0090312 0.0105640 0.0000000 1.2427000 0.6182400 -0.0046748 0.0105640 -0.6389700 0.0000000 0.0101460 -0.0060904 -0.0060904 -0.0060904 -0.0162920 -0.0162920 -0.0162920 0.0102850 0.0143300 -0.6354700 -0.0069195 -0.6481200 0.0033299 0.0012481 0.6476300 0.6238000 0.0022193 -0.6321600 -0.6695700 0.0024969 -0.6438700 -0.0041546 0.0045800 0.0045800 0.0045800 0.0043021 0.0105640 0.0105640 0.0000000 -0.6456500 -0.0046748 0.0276380 0.0033299 0.0038854 0.0000000 0.0101460 -0.6413300 -0.6397200 -0.0060904 -0.0949880 -0.0162920 -0.0162920 0.0102850 -0.6425500 -0.6502400 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9860149 11.3224821 3.6578801 9.9785655 5.1218277 11.8758811 2.9698228 1.9698228 8.7526419 9.0466411 -0.2000838 9.1906714 4.6825452 9.7180184 9.8160124 2.2593328 9.5192895 9.3697561 10.2766468 10.4621239 10.0337898 8.3175700 12.2793020 2.3848511 10.5771559 9.7112925 7.7828941 NA 10.6351615 3.6072593 12.3793344 13.2978771 7.9798099 9.5886189 8.7942540 9.5244144 5.5812608 -1.2002495 -1.2002495 4.5547853 8.7857424 10.9372120 9.4201204 5.8333228 8.6781814 6.2511112 10.5354567 6.1486291 9.6547690 NA 12.1009680 4.5812608 7.0760246 9.6496887 6.7255435 1.9698228 9.3914230 9.3429325 11.2156424 0.7999162 13.8912120 NA 10.5033717 NA 6.8713632 6.3697561 7.3923578 8.0690270 13.716725 5.066688 8.414610 13.199112 9.821575 10.347759 12.600093 12.406537 9.595664 11.245174 12.550817 9.684834 9.311653 8.459896 1.384879 7.727679 10.583717 11.434712 7.192218 8.087613 8.963550 9.250081 10.982528 6.066688 8.586170 11.401207 4.844295 3.969823 6.827806 7.438699 11.844465 11.141419 7.255228 9.198644 13.108097 6.076025 9.045453 10.672960 9.896616 10.188994 11.050495 8.994658 3.192226 8.796290 8.468697 4.887364 11.123800 5.226166 10.289749 10.306208 7.135291 13.585966 10.059644 9.759902 12.829274 11.071364 10.484211 1.384879 TCGA-A8-A0A6 64 0 NA 640 breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 61.60.0 2 2 1 4 NA NA 3 3 3 3 NA NA 4 0 4 0 4 0 0 0 0 5 0 0 0 4 0 0 0 4 0 0 0 0 0 4 0 0 0 4 0 4 4 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 4 0 0 4 0 0 0 0 5 0 0 0 0 0 4 4 0 0 0 4 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 4 0 0 4 0 4 0 0 0 0 4 0 0 0 0 4 4 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 4 0 0 4 0 4 0 0 1 0 0 0 0 0 0 0 0 5 0 0 0 0 1 0 0 0 4 0 0 1 0 0 0 0 0 0 1 0 4 0 4 0 0 0 1 0 4 0 0 0 0 0 0 4 0 0 0 4 4 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 4 0 4 0 0 0 0 0 4 0 0 4 1 0 0 0 0 0 0 0 0 0 5.78477e-05 2.280534e-05 11.19307486 7.27928370 6.99032638 10.55960968 NA 10.61007788 -0.91050185 9.86012308 11.36471074 11.36267201 9.64212825 7.81737959 8.27681115 9.25938431 6.96597586 9.37138919 9.83681301 10.22195898 8.12837796 4.41138557 10.54015497 9.73961338 12.04110818 11.61326615 9.70692660 10.50678430 7.63249071 11.08275141 1.89681433 NA 9.20450292 13.20295720 13.22139652 7.90963812 13.46402327 12.62035318 8.97667982 5.49885080 2.41139913 6.23920708 8.90163654 8.20580302 7.55706463 13.06808029 2.25939302 10.03270657 13.25577922 6.49033908 9.03782641 10.42373247 7.06673933 4.97210443 0.08949815 15.31631953 12.38723527 3.94744174 7.40687166 0.08949815 5.53240424 10.04656118 11.00794979 9.61791334 11.72812136 10.51467510 9.30134757 3.67442675 11.35448814 9.81226669 6.06673933 8.32307909 8.61693621 10.03490307 14.28847967 9.25686489 11.56088038 11.37976612 8.80713560 0.67446065 5.48177683 9.22516839 9.37601705 12.28621498 0.08949815 5.25938549 6.94744057 9.84934739 11.37890178 4.92235010 7.88387493 5.33738641 10.93494922 11.94530099 3.41138557 13.85810877 5.13385529 7.38866743 11.78272835 11.77967549 12.90253892 8.13658310 10.79422748 11.09121923 10.92125333 10.88549879 5.23920708 8.39095524 12.02830365 10.83807140 0.08949815 10.03855635 9.19798355 1.08943035 3.17777431 9.74320004 10.01723713 10.32128043 8.78120265 15.25926679 10.05452197 10.26687870 9.07672315 3.89681433 15.67315902 10.06100281 12.57679680 12.20092094 9.79509157 8.89035914 8.64788002 10.69156880 0.457860 1.122700 1.126200 0.038630 0.031001 0.074840 0.037862 -0.203860 -0.200960 0.050941 0.050941 0.034612 -0.109870 -0.103030 0.695770 3.656900 3.656900 0.039478 0.035586 -0.014916 -0.193620 0.061365 0.053948 0.492510 0.047836 0.429230 0.000000 0.446130 0.060365 -0.185840 -0.446740 -0.191990 0.038630 0.074840 -0.011874 0.037862 0.037862 -0.203860 -0.200960 -0.199870 0.032563 0.032563 0.050941 -0.190610 -0.190610 -0.190610 -0.190610 -0.103030 -0.086253 0.683110 -0.444050 0.039478 0.035586 0.060936 -0.014916 -0.446090 0.061365 -0.444420 -0.426580 0.047836 -0.190640 -0.011473 0.000000 0.060365 0.050961 -0.432030 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 9.62764806 12.26391680 6.52408719 9.48284969 5.27928556 10.78468751 3.08946425 1.08943035 8.38866743 8.71516820 NA 8.17426758 2.54888046 10.56569913 9.42819558 0.67446065 9.10626744 10.34861397 11.08910695 9.84267593 10.22936861 7.44701130 10.70646744 3.41138557 9.18089451 9.30134757 3.73331095 NA 10.52773121 4.44701047 12.58493951 12.15571660 8.33501199 10.41082358 8.60515909 9.07387752 5.33738641 2.89681433 -0.91050185 4.54889279 8.46883743 10.98541312 11.05848589 4.84434548 9.01825889 6.68937185 10.67207161 6.62861760 9.59030110 -0.91050185 10.43984594 2.67441545 4.87081842 9.84422149 6.60822968 7.50731181 9.65931487 8.75657067 9.24933061 NA 13.78637240 0.08949815 9.93259509 -0.91050185 7.54478674 5.49885080 8.54272971 8.45796564 14.4434702 4.7041693 8.9598240 13.4640233 10.3206804 11.4538675 13.0680803 11.6657073 11.7635124 10.7911989 14.0218124 8.6517015 9.3760170 10.3823560 -0.9105018 7.6324907 11.4796282 10.6076206 5.7759592 8.6517015 8.4557813 7.9096381 10.0345665 7.9286629 6.7188164 11.6132662 7.2792837 4.3748586 9.3909555 5.9340706 11.1386271 10.1973301 7.1769221 9.5550256 11.3585859 9.0113002 9.6179133 10.1802333 11.2315663 9.7050889 10.2174536 8.9427687 -0.9105018 8.9737060 7.9186426 8.4203759 11.3789018 5.5972541 10.4979428 10.9349492 7.3794780 13.7052612 10.1676099 10.6036801 12.8031679 10.6223021 9.5427299 3.6130247 TCGA-A8-A0A7 57 0 NA 30 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 47.68.0 7 3 2 NA 1 5 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.220179e-06 5.897349e-07 11.6420141 7.4745683 5.9549826 11.5025597 0.2362171 10.4235156 NA 9.6742624 11.6706180 7.6483806 9.0616523 7.9435229 9.0563424 10.0589999 4.8009465 9.4537174 9.2941552 10.1649287 8.3341955 6.0690534 9.7186354 10.5300183 12.4812210 10.5215658 9.5907803 10.4907985 9.4276340 10.3951939 -0.3488679 NA 10.2846504 11.5959131 12.1597386 8.0858293 15.7651060 14.5304971 10.0910319 6.2732529 3.6053995 6.8311096 8.9446728 8.1649285 7.2732529 11.3611464 0.2362171 11.2494862 10.5959131 1.8211387 9.5068483 10.3160927 6.7333503 7.1629542 1.4585395 15.1060611 10.6345510 3.1747579 9.3209720 NA 8.0021405 9.9331310 10.1520429 9.7913918 10.0931077 9.5922487 9.9714375 1.2361558 11.5995683 10.2764533 5.0435195 8.1688706 1.9731337 7.8679471 14.8321397 6.8958976 11.0774658 10.8104417 9.2048303 0.9731337 3.9366003 7.9708732 9.1903598 11.0289538 NA 4.9910501 7.1825821 9.7219929 11.0188888 7.4745683 8.5951810 6.3859107 10.9050486 11.5564000 -1.3488679 13.7701421 4.6955930 6.5819387 11.5446922 13.5134025 12.5527279 7.2134435 10.5696916 10.6266908 10.3346694 11.1274409 4.6053995 8.8788170 11.7261787 8.6610295 3.8606550 10.5017786 9.2594559 1.4585395 2.8998910 9.7485748 10.3930893 9.8848207 9.2172552 15.2595136 9.8890085 10.9885442 6.7753219 4.9179854 14.1045681 7.4259879 12.4533135 11.7428017 9.8248783 9.1678860 8.3200861 9.7870899 0.070817 0.070817 0.070817 -0.038170 -0.038170 0.051956 -0.052126 0.055373 -0.133850 -0.132380 -0.132380 0.729050 -0.127270 -0.066386 0.111840 0.111840 0.111840 -0.061286 2.295100 0.044715 -0.066190 -0.041702 -0.127970 3.296400 0.365590 -0.011749 -0.011749 0.335450 0.325110 0.070817 0.070817 -0.023292 -0.038170 0.051956 0.051956 -0.052126 -0.052126 0.055373 0.055373 -0.141610 0.096961 0.088013 -0.132380 -0.126420 -0.126420 -0.126420 -0.126420 -0.066386 -0.114710 0.111840 0.111840 -0.061286 -0.118870 -0.123400 0.046842 -0.066190 -0.238170 -0.107750 -0.127970 -0.149780 -0.094134 -0.011749 0.335450 0.312660 -0.023977 -0.133550 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.322 0.322 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.322 0.322 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 10.6976430 12.8231597 3.5091764 9.0669427 7.0393040 10.5737855 4.0774652 4.0087558 8.7213221 6.6455547 NA 8.7399892 3.3516425 11.2441252 8.9062295 2.5580962 10.0894731 9.7804840 10.4206257 10.9118266 10.3956523 7.9595401 9.7446186 4.1106305 5.9910501 9.9714375 2.2361558 NA 12.5422252 1.8211387 13.0033824 12.3689846 7.9203278 10.4605673 9.8649129 10.3684491 5.4966924 2.3516283 0.6512239 2.6512010 8.7078388 10.2709626 10.4892231 6.0774652 6.3859107 7.7675449 10.5138384 5.7386652 9.5467764 NA 11.0303086 4.3236295 3.4060876 9.4124697 4.7693116 10.1380361 9.9538400 10.5138384 11.7590720 1.9731337 13.6752152 1.9731337 10.6890911 NA 8.5520677 4.0435195 8.7714390 9.0920702 12.228630 6.309413 8.417730 15.765106 10.113233 10.837625 11.361146 9.264070 9.260380 10.759726 13.398555 8.145056 9.190360 9.177700 1.236156 7.943523 11.834526 10.5349898 4.1430505 8.9446728 7.7649432 7.7199795 9.6543464 9.0605919 7.6053973 10.5215658 7.3129791 0.9731337 4.1106305 7.4770499 11.2314596 11.1000917 8.3022528 9.8404078 10.6427229 10.6270490 9.7913918 10.5041206 10.4177300 10.1435550 10.4629771 9.5414653 NA 9.5295202 7.9798762 10.3555370 11.0188888 7.5399443 10.3363878 10.9050486 7.6583965 13.7804841 10.6013924 11.0010352 12.1927817 10.1659151 9.1619653 5.3654476 TCGA-A8-A0A9 80 0 NA 396 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA NA NA 47.68.0 5 1 1 NA NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.733988e-07 1.668684e-07 11.6557188 4.8134990 7.1827330 11.4697753 -0.7715199 10.6828363 NA 10.4829751 12.0796027 12.0555819 9.4711157 6.6879691 9.5340287 9.4970790 7.1563147 8.4464945 10.1039024 9.5527175 7.0958158 -0.1865574 11.3843039 9.9983748 9.0221403 11.7802452 8.6154774 10.6902722 5.8059657 10.6779281 NA 1.2285417 8.0598441 10.4920995 13.0583588 8.3239338 13.3097291 14.1497968 10.7045236 6.3212950 2.8723954 5.8284488 8.7153721 9.7623533 7.4477056 13.4703339 -0.1865574 11.1611208 14.0662634 3.8432503 9.9517115 11.2444746 6.5093079 4.1111816 -0.7715199 13.3784233 9.6246065 1.8134836 7.4549490 2.0359054 4.0614306 9.2299452 10.6450706 9.7078119 11.5443941 10.0590521 9.8321633 -0.7715199 11.2409869 10.7674534 7.3212941 7.8469226 1.0359054 11.4448281 15.2640986 8.6048794 11.7814461 11.4618570 8.0471190 2.8135042 4.1592740 9.3507178 9.3591076 10.9117509 NA 5.3474779 7.5139391 10.0049700 10.9022877 5.6714802 6.0740280 5.3265697 10.1986428 12.0314571 3.3578194 13.3842248 5.3265697 7.1856386 12.3304306 12.1622276 12.9067519 7.9834246 10.4458889 11.0084615 10.8835801 11.5163936 4.8867501 8.7032568 12.2658265 11.4792795 0.2284801 10.5185558 9.3133454 -0.7715199 3.6433483 9.4373809 11.0657707 10.2616158 9.4519354 14.6950118 10.3636049 9.9556065 9.0407144 2.9289766 16.2094798 7.6100799 12.7236425 11.1207002 9.8528754 9.4788353 8.5970436 11.0390443 -0.17942000 1.28910000 1.25710000 0.00000000 0.00000000 0.51141000 0.78331000 -0.10145000 -0.10145000 0.64249000 0.64249000 0.64249000 -0.05967300 -0.05967300 0.00097064 3.65690000 3.65690000 0.25636000 2.28150000 -0.22256000 0.16595000 -0.04088800 0.03354900 0.03354900 0.03354900 0.41329000 0.41329000 0.41329000 0.78234000 -0.17942000 -0.17942000 -0.17752000 0.00000000 0.51141000 0.51141000 0.78331000 0.78331000 -0.10145000 -0.10145000 -0.10145000 0.65259000 -0.52440000 0.64249000 -0.34561000 -0.31506000 -0.31506000 -0.31506000 -0.05967300 -0.05967300 0.00097064 -0.85773000 0.25636000 -0.56783000 -0.58350000 -0.20423000 0.16595000 -0.04088800 -0.55066000 0.03354900 0.03354900 0.27868000 0.41329000 0.41329000 0.78234000 -0.24849000 -0.31085000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.244 -0.896 0.642 0.642 -0.315 -0.315 0.000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.244 -0.896 0.642 0.642 -0.315 -0.315 0.000 8.0229525 13.5800974 6.3629625 10.3344455 3.2729339 10.9543292 -1.7715199 NA 7.6143992 7.2592037 NA 6.5530778 4.3370617 10.2821235 9.9367586 2.2285417 7.8002897 9.5948592 11.1524215 10.2787257 9.8001758 9.0318608 9.7850431 3.1354199 9.3186495 9.8321633 2.3160009 NA 10.9135047 1.6879565 12.0990943 12.1011156 7.3291990 9.9470698 9.0653763 10.0025003 4.8867501 1.5504574 2.2285417 6.9632464 8.7898248 10.0759858 8.4282094 2.6879789 6.0502470 6.2000806 10.2327574 7.0771597 9.6889928 NA 11.3595900 3.7203879 4.0358878 8.6122736 5.7294984 NA 9.7057893 8.8822777 4.0358878 -0.7715199 13.8889507 0.2284801 10.3725578 NA 8.1096510 2.9289766 7.5162492 8.4232937 15.900810 4.970002 8.299999 13.309729 10.267113 10.826124 13.470334 12.805317 11.722415 11.290077 13.554299 11.078528 9.359108 9.854702 3.357819 7.671480 12.190167 10.9587948 6.8759950 8.9547550 8.3066879 8.8991932 10.4841970 6.6797475 8.5583335 11.7802452 6.2564427 2.3160009 5.1111816 7.7132188 10.3620003 9.6976699 9.1035184 9.3033474 13.7048718 3.7203879 9.7078119 10.4525386 11.7287564 10.3490988 10.4693283 8.6003136 -1.7715199 8.7981267 6.1769052 1.5504574 10.9022877 7.4158888 10.0740388 10.1986428 7.9462133 13.5282100 10.0294369 9.3416280 12.9189169 11.3545961 9.6951233 0.2284801 TCGA-A8-A0AB 54 0 NA 518 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes NA NA NA 56.63.0 5 2 3 NA NA NA 1 4 2 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 1.39057e-07 11.0946889 6.9837392 8.0953691 11.7424305 -1.9556758 10.4772237 NA 10.3733957 12.2806974 6.0940080 10.2284154 7.7201170 9.5132929 7.8643391 7.1862668 8.8131713 9.9495469 9.7652591 6.6064023 0.3661403 10.3359063 9.4535509 8.8040481 11.3214474 8.8896500 10.6882416 1.8515192 11.3898410 NA 3.4017124 6.8515154 11.9247001 12.4860667 6.3750777 13.7420777 14.2738988 7.3524990 7.1760165 3.8515192 4.9983580 9.0157036 8.2596929 7.1156222 13.4214044 1.8515192 8.6789708 14.2683312 5.6215889 8.6308026 11.5095988 7.5158354 3.6880125 -0.9559557 10.5065728 7.0748276 4.0441580 8.6551847 -0.9559557 3.9268060 10.3427954 10.9429503 10.1888182 11.6894806 11.0926468 9.4699004 -1.9556758 12.1959693 10.3044914 5.6064037 8.7497923 7.2487312 12.2154931 14.7730105 7.5730048 11.4442389 12.4414335 9.0844497 2.3660844 3.1316224 9.8754672 9.9544280 10.9963552 -0.9559557 5.1316224 7.2389168 9.8230584 10.5541823 4.8896488 3.6588741 4.4192018 9.6263019 12.3782936 0.6291001 14.0072366 6.1209760 7.8090317 11.8684226 11.7753729 13.0094933 9.1309597 10.9619049 11.5252025 11.1352565 11.5946662 5.8833642 8.3307179 12.3401441 12.6225916 -0.9559557 10.2389168 9.4819120 1.5036032 4.3800852 10.3006635 11.1294664 10.9542405 9.1650459 14.5158828 10.6335771 10.4380867 9.2103231 0.3661403 15.6743489 10.2422980 12.9382672 13.2479285 11.1289684 9.5035916 9.3649604 11.4481426 0.538720 1.512000 1.509700 0.011400 0.011400 0.068309 0.000000 0.095653 0.252230 0.229950 0.229950 0.239850 -0.328320 -0.328320 -0.792440 0.130360 0.130360 0.078727 0.078727 0.106280 -0.784780 -0.314010 -0.525940 0.305530 0.338040 0.086233 0.086233 0.086233 -0.274040 -0.315170 -0.335600 -0.315290 0.011400 0.105260 0.073115 0.000000 0.000000 0.095653 0.252230 0.303780 0.049966 0.049966 0.262630 -0.368840 -0.368840 -0.368840 -0.368840 -0.328320 -0.315990 -0.797700 -0.792600 0.078727 0.078727 0.078727 -0.968960 -0.784780 -0.310700 -0.796040 -0.521740 0.338040 0.103070 0.086233 0.086233 -0.296430 0.118140 -0.313300 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.194 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.194 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 7.9525526 12.8881301 9.4159365 9.4327154 3.7990458 11.0108456 -1.9556758 -1.9556758 8.6025808 7.8849379 -1.9556758 7.3624997 4.1316224 10.2090669 9.3138712 1.8515192 6.7990471 9.7001378 12.0000822 9.4343288 9.9950475 7.6440726 9.7315356 1.6291001 10.7350310 9.4699004 2.9021315 NA 10.9204851 2.7990458 11.6071178 11.8646381 7.3202843 9.8639398 5.5519558 9.4082947 6.8833642 -1.9556758 2.2140937 2.2920749 9.5642875 9.3156231 9.8279767 3.8770473 9.0136903 5.2339839 10.3859567 6.8833642 9.9469118 NA 11.6566829 0.3661403 4.0441580 10.0366628 5.1401897 1.5036032 8.4881394 6.1837108 4.2140859 2.1316224 13.7233376 -0.3708999 9.9870410 NA 9.0292903 3.7446024 8.3851225 8.5509634 13.3394378 6.1102484 8.6835007 13.7420777 10.0926468 11.2731289 13.4214044 12.5810749 9.7923529 11.4940540 13.4213366 11.1606664 9.9544280 10.0689533 0.6291001 7.4725203 12.1097444 11.5164700 8.9555520 8.9382199 9.9760056 10.0406334 10.4476833 4.8123442 3.0441668 11.3214474 3.7990458 3.2536112 9.9367027 7.2611725 11.6073562 9.8019666 8.5677219 7.2801741 13.6341914 2.7445917 10.1888182 9.2663511 11.6547235 9.4912432 10.6902686 9.1856285 -0.9559557 8.6714841 6.5400149 3.0885487 10.5541823 6.3479402 10.3297211 9.6263019 7.8500487 13.6635489 9.5963487 9.7467656 13.2267483 11.1840310 10.2240691 -0.3708999 TCGA-A8-A0AD 83 0 NA 1157 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA mixed histology (please specify) yes NA NA NA 61.60.0 5 5 2 2 NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 2.781139e-07 10.7333514 4.4162182 6.6963236 11.4954283 -0.1984274 10.7170118 NA 10.1830488 11.6930997 10.8095842 10.1368962 8.4774628 7.5054091 8.2340476 8.3845886 8.6625929 10.5750572 10.1568569 7.2609374 NA 10.4901932 9.6587094 12.6658855 11.6929099 9.3280050 10.7687321 3.8459015 10.7226029 NA NA 8.5429726 13.1719208 12.0360239 7.1324226 13.5018914 12.6758149 9.6664658 6.4949931 3.9714332 5.8995382 8.5002105 9.4032767 7.8836550 12.6727373 -1.1985930 9.8259530 12.6753344 5.9512521 8.9027067 10.4743732 6.9256268 7.0303250 NA 12.8512089 10.5647058 0.8014898 8.6391337 -1.1985930 4.6343958 10.4849392 11.8364767 10.8404248 11.6377535 10.0140022 10.0932521 2.1234344 11.7850339 9.9106835 6.9512532 7.9100304 13.9785360 9.8231800 15.0163372 8.1905561 11.0845942 10.4381304 8.3713615 -0.1984274 6.3013517 7.2151340 9.0612491 12.2210711 0.3864799 7.3939627 7.0541712 9.7923189 11.2670722 5.3713602 6.7787855 5.7322421 10.5019455 11.3779902 2.6088565 13.9579050 6.8675950 7.5088652 12.5860385 13.2771126 12.9643692 6.9359323 10.9047936 10.8969029 10.7996414 11.2298660 4.5563926 7.8404248 11.5920580 12.4281275 -0.1984274 10.2345696 9.2371760 0.3864799 3.3275724 9.8376795 9.8190103 9.7196238 9.4143743 15.2918554 9.8141304 9.9080688 8.0422974 1.6088565 15.6137960 4.8238716 13.0608078 12.4245871 9.8015058 9.3732584 8.5729954 9.6865616 0.00194180 0.00194180 0.10045000 -0.00041585 0.00055459 0.01480200 0.01140000 0.73587000 -0.79736000 0.01102200 0.01102200 0.01102200 -0.77753000 -0.77753000 -0.00163890 -0.00163890 -0.00163890 -0.00027724 -0.00027724 -0.78933000 0.00861350 0.02244400 -0.78159000 0.63865000 0.66456000 -0.02890100 -0.02890100 -0.02890100 0.00220810 0.00194180 0.00194180 -0.03844200 -0.00781760 0.01516800 0.01480200 0.01140000 0.00276040 0.00069327 -0.80109000 -0.00968060 0.00597000 0.00597000 0.01810300 0.01126100 0.01126100 0.01126100 -0.00534730 -0.77753000 -0.77753000 -0.02195000 -0.00163890 -0.00027724 -0.00083160 -0.00083160 -0.78083000 0.00277910 0.01363200 -0.77116000 -0.78159000 -0.80459000 0.01112100 -0.02890100 -0.02890100 0.00777830 0.01000600 0.02412700 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 9.3892833 13.7165916 7.8404248 9.6007875 1.1234013 10.5999776 -0.1984274 NA 8.1098448 8.3445378 NA 7.2205389 1.6088565 10.3435704 9.0434889 0.8014898 7.3713611 9.8662486 12.9222297 9.2288187 9.5043711 8.7263183 10.5208946 5.1413551 9.7128979 10.0932521 6.6088610 NA 11.2506545 2.9714240 12.8081826 11.7903680 7.7351965 10.3240874 8.3618385 9.2392579 4.1938269 -0.1984274 -1.1985930 4.6088625 8.8622018 8.6216849 11.1691936 3.5563926 0.8014898 5.6088595 9.5918544 4.8675950 9.9695511 NA 10.9572728 2.9714240 9.5959217 9.6786672 6.0734347 -0.1984274 8.9826582 7.2527165 6.9204469 NA 13.4817555 -1.1985930 9.9537906 NA 6.2023844 4.1590559 8.5260199 7.5696901 14.285369 5.445363 8.870284 13.501891 9.599289 10.525593 12.672737 13.123434 9.487131 10.859498 12.895996 8.938497 9.061249 10.223571 1.386480 7.231958 10.604022 11.138570 7.720369 8.907414 8.653255 8.793028 10.170072 7.393963 7.123434 11.692910 6.653255 3.501949 5.595921 6.649878 10.505409 9.076466 7.624873 8.187368 12.552841 4.010959 10.840425 10.266562 11.855601 9.320159 10.300853 9.671100 NA 9.117968 8.724477 1.971442 11.267072 8.894263 10.461056 10.501946 7.495237 13.126454 10.263497 10.690629 13.016432 9.995031 9.190599 2.123434 TCGA-AC-A23C 62 0 NA 29 breast stage iib t2 n1 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white NA 142.49.0 NA NA 4 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.35894e-06 6.244252e-07 12.1320159 6.7221900 7.5383255 10.1594054 -0.1481610 10.2108425 0.2668765 10.5991789 12.0233147 10.2989083 10.0774342 8.1782545 8.5591843 8.8778875 6.4956808 9.8930280 10.5298383 10.4223133 7.6847150 4.1248409 10.7634668 9.4950801 14.6349939 10.8014087 9.5230712 11.0539490 6.3057809 10.9939322 0.5888046 1.8518390 8.8433470 12.1629112 12.5084734 7.4763161 15.2498451 13.4542920 9.1857258 7.4089699 5.2668615 6.0150559 8.7405684 8.6144839 8.5394923 13.1496489 NA 9.3622597 13.0380426 5.8889137 8.9464484 10.9763773 8.7170430 8.7004480 2.9672977 14.9239555 12.4577722 2.4367748 7.3701503 -1.7331235 5.4665358 10.5620576 10.6899785 9.6413587 11.0734122 11.1385754 9.3616002 4.4566879 12.0941061 9.2470023 6.9845392 9.0342196 6.5147898 10.6767839 14.7331940 9.0678920 10.0922189 11.5409495 8.9559869 2.1737671 4.4956824 9.5271941 9.0074868 11.5727819 -1.7331235 6.4267344 6.2892295 9.5100366 10.2791380 5.1123540 6.5660708 5.5429885 11.1500787 11.9592602 3.3543252 13.2884499 6.2668634 7.3935672 11.5932921 13.0864929 13.2177374 8.4064138 10.1263974 11.5292511 12.2519298 11.2947686 5.8442902 8.3463475 12.5249869 10.6416305 -1.7331235 10.2376875 9.1525589 2.3543393 4.1502428 10.3389953 8.7303869 10.2210589 9.6277097 15.2600775 10.0592463 10.1737532 9.3832066 3.1737511 16.3728223 9.8060214 12.7525033 11.3823940 9.9836821 9.1805000 8.8898294 10.2170649 -0.0243880 -0.0243880 1.2576000 0.0023581 -0.0111980 0.0122370 0.0505340 3.1028000 0.1079900 0.0178240 0.0178240 0.0235660 0.4101100 -0.3690600 0.2417100 -0.2027400 -0.2027400 0.0203430 0.0319990 -0.0113350 -0.1497800 0.0026357 0.0210430 3.6569000 0.4344600 0.0447150 -0.4211200 -0.0495590 2.1290000 0.0055529 -0.0243880 -0.0040162 -0.4138800 -0.4546900 -0.0220820 -0.0131970 -0.0131970 -0.4748000 0.0056919 0.1079900 0.5056800 0.0145640 0.0178240 -0.0103700 0.0000000 0.0000000 0.0000000 -0.3690600 -0.3690600 0.2417100 -0.2087100 0.0203430 0.0319990 0.0502500 -0.0113350 -0.1497800 -0.0113050 0.0410530 -0.4300700 -0.4068300 -0.4714100 0.0447150 -0.4211200 0.0663720 -0.0263040 0.0390540 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3576367 12.4773057 7.2384067 9.6155908 3.7587189 11.0568037 1.7263081 -0.1481610 8.4000050 7.1060666 -0.7331235 7.9845392 2.8518190 10.8623532 9.3622597 -0.7331235 8.5487926 9.1510330 7.4714338 8.6494865 9.3961456 8.4504978 9.9441418 2.1737671 8.9664351 9.3616002 2.5147787 2.3543393 10.0420614 4.6244168 12.1379015 12.0707919 7.5568815 10.2714342 9.7751526 8.3503421 4.5522664 1.4368015 0.5888046 3.4367882 8.0514977 8.7597171 10.4436591 3.9392924 8.6803106 4.2441412 9.5927302 6.1677292 9.3766932 -1.7331235 11.5245451 2.2668765 4.8060198 9.8402826 6.9910354 6.8442915 9.5441500 9.0620907 8.6100482 0.5888046 13.3277696 0.5888046 10.6773140 -1.7331235 8.0284139 4.5706451 8.3002857 9.0620907 12.862213 5.149507 9.032563 15.249845 10.776885 11.682340 13.149649 12.288970 9.146086 10.942158 12.723089 7.728342 9.007487 9.682604 1.074231 8.309890 13.033599 11.025294 8.151033 9.063714 8.811827 8.303036 10.631068 6.974222 8.056396 10.801409 6.654879 4.048219 4.514791 7.107420 10.983468 10.594135 7.218148 9.274591 12.194270 8.436788 9.641359 10.271785 12.191026 9.657569 10.977454 9.331605 6.197600 9.330689 7.558517 8.364895 10.279138 7.829105 10.521891 11.150079 8.151033 13.308222 10.274591 10.322484 12.309548 10.380605 10.345347 2.790418 TCGA-AC-A23E 50 0 NA 72 breast stage iib t2 n1 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white NA 136.49.0 NA NA 2 2 NA NA 1 1 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 5.562279e-08 11.5684273 5.0451546 7.3373918 11.0765379 1.6122109 10.6497433 -1.7098115 10.3070766 11.7324342 6.8975986 9.1482493 7.0814312 8.8845927 9.3516394 6.4751433 9.0740850 9.6144487 9.9072765 7.9431132 3.4997184 9.3630707 9.9377266 13.6024776 9.9300611 9.3843460 10.7484185 3.1971577 10.5974662 NA 1.7497059 9.2327828 11.6224447 12.7834983 8.5417506 12.6202748 13.8434775 9.5232887 7.3482599 4.9049802 7.4323757 8.4714204 10.0988302 8.5802872 12.9355326 0.6122109 10.6587747 13.3215818 2.4601921 9.1231582 10.1828111 7.2357117 4.8294285 -1.7098115 14.0955541 9.5482453 1.6122109 7.7700487 -1.7098115 4.3346612 10.0304706 10.5857502 9.4495090 12.7105575 10.6206250 9.8859919 1.0976108 11.7209821 9.7196749 6.4850258 8.2517181 1.9907008 11.5259833 15.4350260 8.4254518 10.2180462 11.6480951 8.6121962 3.0451634 2.3777346 7.8352325 9.6356735 11.6086698 0.8752296 7.4825611 6.8177448 10.1590908 11.4385859 9.0960122 6.1667857 5.3455490 10.7468793 11.8820243 1.2902474 13.7719731 5.3882998 7.0215874 12.4168114 13.2923361 12.8689947 8.3764046 10.8541795 11.0767421 10.7728998 11.4822528 5.3777311 8.3536634 12.4167307 8.8883207 -0.7098115 10.4208388 9.2902682 -0.7098115 2.3709175 9.5894763 10.6048515 10.5250857 9.1294721 14.7017296 9.8686409 9.5417506 7.5190866 6.2386359 16.1223795 8.2386355 12.7541757 12.0159540 9.9587100 9.1858435 8.6008811 10.2130719 -0.114780 0.638710 0.638710 0.000000 0.054773 -0.129890 0.228130 0.286330 0.286330 0.209140 0.209140 0.225660 0.219650 0.212480 -0.178490 -0.178490 -0.178490 0.268330 0.268330 -0.110730 0.278260 -0.487820 -0.497950 -0.055339 -0.055339 0.186510 0.186510 0.186510 -0.057074 -0.114780 -0.114780 -0.115440 0.000000 -0.123390 -0.131310 0.228130 0.228130 0.286330 0.286330 0.286330 -0.128290 -0.130010 0.209140 0.248650 0.248650 0.266290 0.266290 0.212480 0.236790 -0.178490 -0.178490 0.268330 -0.518020 -0.518020 -0.113060 0.278260 -0.501920 -0.510080 -0.506150 -0.055339 -0.059093 0.186510 0.186510 -0.057074 0.066560 -0.097058 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 9.6178208 14.3046811 7.5848889 10.0919767 1.9907008 10.2495457 -1.7098115 0.8752296 8.1263188 8.7165331 -0.1246917 8.5457808 1.6122109 10.0543105 8.8371627 0.2903064 7.7373515 9.1247394 11.2515370 9.8728808 9.2317633 7.8099044 11.7367054 4.4601921 7.4501398 9.8859919 2.7497059 2.4601921 10.3154078 1.6122109 13.0230186 12.3602214 7.9872356 10.6017327 8.6985981 9.1136354 5.6825845 2.4601921 -0.1246917 1.0976108 7.9068173 9.1986609 10.1915123 2.7497059 6.0747730 4.8752296 9.9309651 6.8752308 9.5106465 0.2903064 11.1016429 3.9907099 3.4997184 9.9846131 5.3544169 1.9907008 10.0173378 8.7102286 6.2618110 1.2902474 14.2525995 1.6122109 10.3620658 NA 7.0451557 5.0846851 8.0960119 9.1482493 11.981122 4.962692 8.192643 12.620275 10.290663 10.701779 12.935533 11.967327 9.285329 11.085090 13.100288 9.712859 9.635674 9.162943 -1.709812 7.197159 11.373249 11.4174566 6.3346630 8.9287040 8.2283776 8.3948669 10.4947232 7.0079445 6.8294272 9.9300611 6.4551760 4.2210032 7.7435392 7.1679821 12.0298379 10.6815118 8.6825856 8.1466939 12.8179285 3.8448576 9.4495090 10.4384270 11.4633207 9.4899407 10.7280203 9.6082461 2.9907008 9.2170683 8.0511877 3.6478210 11.4385859 10.1314394 10.2986969 10.7468793 6.9159773 14.3519348 10.0749030 10.4592537 13.1650095 10.2338820 9.4831775 -0.7098115 TCGA-AC-A23G 76 0 NA 330 breast stage iia t1c n1 mx 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 2 white NA 202.42.0 NA NA 2 5 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 2.781139e-07 11.0040653 7.5451444 5.6269822 11.3889246 2.3468718 9.9531475 NA 9.7131966 11.5107038 9.6688026 9.2793002 7.3404198 9.0192997 10.3347475 5.9657843 8.2877124 10.0223274 9.7206718 7.7826936 5.3468754 9.8004390 11.4915327 10.3323098 10.8810384 9.1357093 10.3573027 5.7489737 10.0728493 0.5395311 5.5618882 8.7683382 12.4093061 11.8165977 8.2119447 12.7139771 11.9754502 11.4790988 6.7094450 2.7094450 7.9275368 8.3339353 9.2119450 9.2826710 11.6173366 NA 11.7163160 13.1981773 5.2119467 9.7459968 9.6713765 6.8156433 5.5168000 NA 14.8320860 12.6494122 3.9318343 8.3533008 -0.4605682 5.8249206 9.4313033 9.8098149 10.0883415 10.4516603 9.2468786 10.5451440 3.6269881 10.9036542 10.5743185 7.0313731 8.6349167 1.5395311 9.6662240 15.4270258 8.0903819 11.2334420 10.9226838 9.2189996 4.0630801 0.5395311 8.7094447 8.8109825 11.6832216 NA 5.6269822 7.7144454 9.8179690 11.0066156 7.3208791 6.4343380 6.0941094 9.9058417 11.4739475 1.5395311 13.6213358 5.9657843 7.3143068 12.8421585 13.9809076 12.1155314 9.3323098 10.6322767 10.7910019 10.5329462 10.7945481 4.2944075 8.5310414 11.2185597 10.4643320 0.5395311 10.5839136 8.6401820 NA 3.7142455 9.1431459 11.0478095 9.4628470 8.7144451 15.0728493 10.1905713 9.2571959 6.7293448 5.1542308 13.6553760 10.0020217 14.0045119 12.4867912 9.9210624 10.1244821 8.0473143 10.3023915 0.0026945 0.7969900 0.8207900 -0.0016629 -0.0016629 0.0038854 0.2174500 -0.0145810 -0.1972500 0.2111500 0.2111500 0.2111500 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0044312 -0.0044312 -0.0027707 -0.0048461 -0.0058140 0.1910200 0.1863000 0.1816400 0.1761800 0.1761800 0.1634700 0.1977100 -0.0161860 0.0026945 -0.0079285 -0.0016629 0.0038854 0.0038854 0.2114600 0.2114600 -0.0145810 -0.1972500 -0.2221900 0.2120700 0.2094700 0.2111500 -0.0085766 -0.0085766 -0.0085766 -0.0085766 -0.0092666 0.0020805 -0.0092666 -0.0092666 -0.0044312 -0.0044312 -0.0044312 -0.0027707 -0.0088526 -0.0092666 -0.2265000 0.1910200 0.1863000 0.0016642 0.1761800 0.1634700 0.1977100 0.2038100 -0.2504300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 9.1150587 14.8940444 9.2225141 10.8631373 NA 10.7019109 1.8614393 1.8614393 8.6506551 9.6493501 3.2399632 8.8546689 5.0941094 9.5395194 9.3708269 2.9989537 9.2207580 9.4820341 11.6049357 9.8726749 9.2422116 6.9489103 12.4851463 2.9989537 8.9253820 10.5451440 4.9657843 NA 10.9615843 3.2399632 12.9088442 12.2181197 9.3110090 9.6176704 8.0152528 9.6015656 4.7094450 3.1244770 1.1244605 9.0669965 8.9699721 9.7969074 8.9403991 5.0941094 8.1822210 7.4464101 10.1797644 7.1977308 9.6042623 -0.4605682 12.4369869 5.5168000 4.8970710 9.3779356 6.6906881 2.1244936 10.3904877 9.1761442 4.8249206 1.8614393 13.6716176 -0.4605682 10.6129917 NA 8.5423347 6.4937162 7.7779240 9.2189996 12.8977353 4.6687999 8.1394321 12.7139771 9.8272319 10.5893681 11.6173366 11.7556591 8.7731392 10.6342570 14.2189996 12.0035547 8.8109825 9.4893462 -0.4605682 7.2674403 10.7568714 11.690536 6.748972 9.213712 9.135709 7.694338 10.056697 7.070901 7.482034 10.881038 8.592088 4.493718 6.397500 7.167418 12.159510 10.260619 7.865140 8.883815 12.032875 5.294408 10.088341 10.194156 10.661700 11.162486 10.462847 9.072849 NA 9.508849 7.930849 4.583916 11.006616 9.311009 10.886211 9.905842 7.626982 14.255750 9.830690 10.170697 12.983758 11.100807 8.982463 1.539531 TCGA-AC-A23H 90 1 174 81 breast stage iia t2 nx m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 2 2 3 1 1 1 5 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 7 0 0 4 0 4 0 0 4 0 1 4 0 4 0 4 0 0 0 0 0 0 0 0 0 0 5 4 0 4 0 7 0 7 4 0 0 0 6 0 0 4 0 0 1 7 0 4 0 7 0 0 4 0 0 0 0 0 7 0 0 0 0 0 4 0 7 0 0 4 0 4 0 0 0 4 0 4 0 0 0 4 1 4 0 0 0 4 0 0 0 0 0 0 0 4 0 7 4 0 0 0 0 0 0 0 0 4 0 7 0 7 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 7 7 4 7 0 4 0 0 4 0 0 4 4 0 0 5 0 0 4 0 1 0 6 0 0 4 0 0 4 0 0 4 4 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0.0001190224 3.316392e-05 12.2414094 0.5731806 8.0856881 10.6491587 1.4211560 9.8732686 -0.7487960 10.2292121 11.7010103 10.4063512 9.7855197 8.1626088 8.1893260 9.5544267 4.9791382 10.5003302 9.5521413 10.7080845 7.5203437 1.7106577 9.2860157 11.3263616 15.7998129 8.8778384 9.4091953 11.4151808 3.8950699 10.2437904 0.2512040 2.8361867 9.0102727 11.4038185 12.0399351 8.8723529 16.4579450 12.9775414 8.2068669 4.2956128 2.5731564 5.1819533 9.9196586 4.8361817 7.7470718 13.5548905 -0.7487960 9.0440072 13.0846011 0.5731806 9.2267065 10.8757838 6.6175395 10.6743326 4.9791382 12.0911763 7.3701582 2.3386811 8.7855195 NA 4.4410385 11.0511055 9.5737083 9.8855741 11.6935124 11.9828540 10.0625915 2.8361867 11.4758215 9.4079320 5.7747792 8.2969763 13.3079391 9.5492793 14.9367869 7.4492692 11.6967490 11.1475491 7.6435344 0.2512040 5.4009648 8.2694171 9.6004980 11.1793650 -1.7485536 5.7981102 7.4360919 8.4373310 10.7327640 6.1277344 5.1338594 4.4800324 10.1749157 11.6900086 5.2170019 14.1312307 6.1460340 6.3545051 11.2290333 13.3259436 13.3429827 7.1849071 10.3495779 10.6845414 9.8944596 11.0233251 5.4009648 8.6142564 11.8660416 10.5779272 NA 10.2578935 9.6065679 1.0585936 2.2521128 10.5188813 11.2095882 9.8441410 9.8464742 15.3854927 9.7029430 10.0019238 7.3360254 1.9516624 16.1214731 9.9058528 13.0640459 11.4737098 9.6520962 9.1959288 8.2763561 10.0261932 -0.01752900 0.36395000 0.86037000 0.61027000 0.52923000 0.03284500 0.00000000 -0.03763100 -0.00491770 -0.97630000 -0.49277000 0.88190000 -0.00899060 -0.47363000 0.45700000 3.65690000 -0.00443120 -0.50339000 0.43210000 -0.00498440 -0.01144400 -0.01119800 -0.02657700 3.65690000 3.65690000 -0.08604900 -0.06531300 -0.06531300 0.83888000 -0.06324900 -0.01752900 0.37858000 0.58695000 0.03284500 0.03750000 0.00000000 0.00000000 -0.01945200 -0.00491770 -0.00097017 -0.01395300 0.31466000 -1.01590000 0.00791750 0.44510000 0.44647000 0.42351000 -0.44663000 -0.49434000 0.45700000 -0.00443120 -0.50339000 0.43210000 0.41881000 -0.02726100 -0.01144400 0.01712400 0.45837000 -0.02657700 -0.53185000 -0.47997000 -0.08604900 -0.06531300 0.88206000 -0.01505400 0.98349000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.587 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 -1.006 0.449 0.424 0.424 0.000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.587 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 -1.006 0.449 0.424 0.424 0.000 7.5595561 12.9147749 2.5731564 9.0035975 2.1581108 11.5528559 -0.1637527 NA 8.1261980 6.8399319 NA 8.0697988 1.7106577 11.0896329 8.7320069 3.3386811 5.2624444 9.5966219 10.8262832 10.5053596 9.8375828 7.8229697 10.3236844 1.0585936 8.3037849 10.0625915 1.4211560 NA 10.1815845 2.2512040 11.6353260 12.7635869 7.0777653 9.7903755 7.2763561 9.0793533 5.4896200 1.4211560 -1.7485536 4.2735830 8.1819543 8.6153516 10.5694771 2.1581108 9.0744169 6.4991443 10.3613738 6.5319880 10.0670003 -1.7485536 8.5446886 2.6435330 3.5731442 9.6927863 6.7292577 2.4211290 8.2241966 7.2680254 5.0585719 0.8361665 13.6871800 0.5731806 10.9594385 NA 8.7490686 3.2512192 8.2270648 8.2915064 13.640578 7.228496 8.666959 16.457945 9.961007 11.253856 13.554891 10.016917 9.294928 10.301065 12.668872 6.630595 9.600498 9.368210 -1.748554 9.263841 12.337519 11.0759767 6.4060349 8.8905573 9.0745841 8.5168319 10.9287382 4.4991443 9.0649979 8.8778384 6.8659262 NA 6.8134593 8.8752720 11.7858844 10.5643832 7.9429601 9.9568492 10.4734079 3.9791382 9.8855741 9.9174407 10.8837577 9.7956983 10.5652335 9.4465889 3.5366249 8.9113198 6.8585468 3.6435330 10.7327640 8.0276500 11.3095468 10.1749157 7.3386793 12.7502529 10.5938471 10.5812933 12.0256950 10.1084203 9.4267663 -0.1637527 TCGA-AC-A2B8 84 0 NA 45 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 155.46.0 NA NA 2 3 NA NA 1 3 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.835552e-06 6.674735e-07 11.09669691 8.74593410 7.60368123 11.19965873 1.59617186 10.77526664 -0.98879064 10.41476915 12.03601783 11.44585269 9.92336522 8.22311262 9.00132853 9.03012002 6.51505009 9.32240501 10.12951666 9.84569546 7.84094720 3.62593673 10.69991188 9.76025588 12.43184262 11.38204802 9.42802197 10.37289411 6.05561866 10.25349344 0.01120936 0.01120936 9.62869195 12.19074482 12.34905538 7.72203083 12.57989314 13.39236178 10.11680568 5.82500455 4.09868904 6.70471153 8.49100486 10.24514361 7.85357467 12.46847704 2.01120936 10.68409172 13.07571460 5.44585248 9.51665895 10.86180195 9.45105529 7.05288318 NA 13.76686471 10.83123384 4.14050874 8.15715642 -1.98850436 5.15077493 10.08536596 10.46706536 10.13921878 12.37214008 10.31728609 9.96977718 3.33315177 11.88754953 10.31728609 7.49906455 9.20413362 9.54211834 10.86648226 15.17105636 9.00999820 11.98267816 11.63201700 9.01614723 2.65507700 4.05562083 9.36712618 9.52149405 11.78075238 NA 5.52692328 6.95959166 9.45313109 11.35843055 6.63327571 6.75269106 5.35107350 10.48594440 11.92093004 3.56581649 13.53564372 6.00557739 7.31272053 12.27801098 12.49062578 13.18349566 7.43748910 10.31956352 11.14115137 10.83183624 11.59865040 5.22067820 8.54260591 12.17879940 12.04628123 0.01120936 10.38544883 9.00628484 1.59617186 3.36489455 10.00239199 10.80929120 10.29199521 9.12105504 14.68799419 10.07664059 9.71166422 8.60274674 4.59618976 15.47011161 9.29604849 13.59089393 12.77739097 9.97231226 9.46192017 8.57727851 10.13483507 -0.00407200 0.44936000 1.32510000 0.00722170 -0.00968060 -0.00152430 0.46656000 -0.00166290 -0.00277070 -0.00705760 -0.00705760 0.46656000 0.01992300 0.00419030 0.00360760 0.00360760 0.00360760 -0.00010703 -0.00010703 0.45598000 0.00555290 0.00885360 0.01488800 0.01488800 0.00638710 0.01293400 0.01293400 0.01293400 0.01209700 0.01391100 -0.00407200 -0.00238860 0.00722170 -0.00152430 -0.00152430 -0.00138580 -0.00138580 -0.00166290 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00705760 -0.00083160 -0.00083160 -0.00083160 -0.00083160 0.00419030 0.00419030 0.00360760 -0.49663000 -0.00010703 -0.00010703 -0.00010703 -0.00761010 0.00555290 0.01014600 -0.48984000 0.01488800 -0.46642000 -0.01422800 -0.47807000 0.01293400 0.01209700 0.00930980 0.01992300 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.4706560 13.4083977 7.3621639 9.8934854 2.5889484 10.2001223 0.8186052 0.8186052 8.3229728 8.2989369 -1.9885044 8.6701322 3.4706540 9.8792752 9.2466404 0.3331947 10.1151679 9.4737266 10.6113697 9.1698341 9.6826328 8.0460233 11.3115770 4.1811503 10.1905115 9.9697772 4.0986890 -1.9885044 10.1301655 4.0773114 12.0574106 11.9196171 8.1079394 9.9207426 8.7185836 9.1151678 7.5600462 1.3331375 1.0112094 3.2591519 8.5848716 8.3742640 9.9686893 6.7459338 8.4254232 5.6111370 10.1317864 7.0880398 9.5080782 -1.9885044 10.4401080 3.5658165 3.9181190 9.6366090 5.3010571 2.9654149 9.9924349 9.6787795 6.2543975 NA 13.4742698 1.8185643 9.8999677 NA 9.0112245 4.5961898 7.9030081 8.2662529 12.87022530 4.71166560 8.81050609 12.57989314 10.42788740 11.14693373 12.46847704 12.65011283 9.46444875 11.25542620 13.21671226 10.76819764 9.52149405 10.08000270 0.01120936 7.43118500 11.06124312 11.35232625 7.67300230 8.70992919 9.30641947 7.52889398 10.15413874 7.47883028 6.93603718 11.38204802 6.47474914 2.71167110 5.94786249 6.68689966 11.97493335 10.43565318 7.56964526 7.91359973 12.81303382 5.63327717 10.13921878 10.27331924 10.62155723 10.39330808 10.64308360 8.94712610 -0.40373271 9.18996388 7.91770922 4.31500823 11.35843055 8.17989665 10.51703598 10.48594440 7.80238711 13.93749726 10.22615061 10.39276734 12.70285893 10.17801518 10.07056885 0.01120936 TCGA-AC-A2BK 78 0 NA 1172 breast stage iiia t2 n2a mx 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 6 black or african american NA 216.36.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.418381e-06 4.449823e-07 11.62142169 3.35522775 5.39961546 10.91794024 NA 10.19953420 -0.05979566 9.49732774 11.53575161 6.74753778 9.97222896 7.81260155 9.52952231 8.26211129 8.92981437 9.16177031 8.77096248 10.85456844 9.18017945 2.26210236 9.45588302 10.65700272 10.50623735 10.76009625 10.40268552 10.61848994 2.60314561 10.78122339 4.33250029 0.35524184 9.75182554 13.34150727 12.31093062 4.16257260 10.62024971 12.87362805 10.49700862 6.34957405 3.84707489 8.17699489 8.26060768 10.34745107 10.06214843 9.50051607 NA 10.08016091 10.25721893 8.28595792 9.60270332 10.41794152 9.02144475 5.74753778 2.05564686 11.65438586 8.24396415 2.26210236 7.60551952 4.73025953 4.23786195 9.60611128 10.41422720 9.70450198 9.71222295 9.95047833 9.39688002 13.39426833 10.55611937 11.21184085 2.99907999 5.60314858 1.94016675 8.82892666 10.78331922 9.99432175 11.57287560 11.19874933 11.12650393 1.16259677 NA 8.78043675 10.05262280 10.44268364 NA 6.73025953 6.66355953 12.26848422 10.66696913 4.33250029 6.26211176 4.16257260 7.39961460 12.32846970 2.26210236 12.40651469 4.67714738 7.33535998 11.66540752 11.05392547 12.56786916 7.50496752 12.13586307 11.06516615 11.02171998 10.99727250 6.95141062 8.73026021 10.95977399 3.21320728 7.41861584 9.64811756 10.51887048 0.35524184 5.97734633 9.71551916 11.52373621 9.55795683 8.78358106 13.69475766 10.94861187 9.94907877 7.87682142 -1.64475816 11.11365219 7.27706139 12.63671619 13.00711335 10.82968722 9.73730431 7.89243899 11.32391815 0.6360900 1.7803000 0.9253300 -0.7910400 0.0736900 0.0495400 0.4021100 1.1661000 -0.1080200 0.0706730 -0.0043527 0.6883100 0.3111300 0.0000000 2.2669000 -0.0225710 -0.0225710 0.0586520 0.0623660 -0.4823900 -0.3768500 -0.7926000 -0.0103700 -0.4055000 -0.3807800 0.4337800 -0.0030475 -0.0820040 0.0182430 -0.3634500 0.0472680 -0.0374900 -0.7910400 -0.8126000 -0.8145900 -0.8147400 -0.7980300 1.1661000 -0.1080200 -0.8235000 0.0479780 -0.3530500 0.0744080 1.2852000 1.2852000 -0.0537460 -0.1352300 0.0000000 0.0000000 -0.7967000 -0.7999500 0.0586520 0.0623660 0.0623660 -0.7944400 -0.3683900 -0.7930500 -0.3297100 -0.0103700 -0.4055000 0.0219550 -0.8235000 -0.0820040 0.0182430 -0.0237030 0.1577100 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.413 -0.815 -0.108 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.413 -0.815 -0.108 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 5.82282700 12.70408723 -0.05979566 8.75289541 1.18097530 13.22438083 -0.64475816 NA 9.26960594 3.30942360 6.23786387 10.06214843 6.73459854 11.17898603 9.70726421 3.96993327 4.13657695 11.39190957 9.85755543 10.02676189 8.18622717 8.46374505 10.07075385 -0.20656186 7.88465103 9.39688002 3.64062093 NA 9.73730431 -1.64475816 12.09763548 12.41211246 8.99636926 8.04172157 7.98457739 11.59779945 7.46374505 1.52516685 0.35524184 2.74753778 8.94206051 8.37342114 8.86202420 8.65442874 9.62349379 6.20696940 9.98912424 6.96624587 10.69507079 1.35524184 10.64466333 5.87878173 4.39961546 10.02999128 6.37481171 4.48450553 7.13000830 6.36644812 5.99184606 NA 13.81430014 NA 10.82129726 -0.05979566 9.70947020 6.47934214 8.87878265 6.57922240 9.938952 9.184151 8.635992 10.620250 9.264364 10.916747 9.500516 10.294433 9.288912 10.883186 13.342662 11.300116 10.052623 9.041721 5.925076 7.880742 11.996144 11.139447 5.515091 6.902116 10.334289 8.983666 10.264990 3.564671 2.055647 10.760096 11.663844 NA 11.155514 9.058389 12.457278 10.938539 8.115109 8.958847 8.846072 4.285957 9.704502 10.241679 10.995466 10.373769 10.462438 8.545045 NA 8.178030 7.520128 5.162577 10.666969 8.272593 11.044345 7.399615 8.542573 14.944009 9.848075 9.593028 11.702565 10.825625 9.920323 1.525167 TCGA-AC-A2BM 41 0 NA 1162 breast stage iib t2 n1a mx 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 1 black or african american NA 216.36.0 NA NA 1 2 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 11.89553806 5.09405023 5.77757752 11.51386140 -0.53533173 10.90504367 NA 10.14681023 11.68990094 8.76961506 10.35343677 7.54684277 9.35495788 8.05901830 8.45621517 9.59590734 9.85969209 9.69291098 6.89514627 1.04963077 11.40537418 9.56798136 12.97755740 12.42061580 9.23865695 10.49259950 5.67414706 10.45479752 -0.53533173 2.98824840 7.96054878 10.63712105 13.34571186 7.79561047 11.52758291 12.69501422 7.63712114 6.40720827 0.78659636 8.58622693 8.64708781 7.81120705 6.19261436 12.34934103 0.04963077 8.95454153 14.58683396 1.27202319 9.54654300 10.67445147 7.37458656 9.27446156 0.04963077 13.34690429 11.82282820 0.46466827 7.17893868 NA 5.06460698 10.42614323 11.04848149 10.89592989 10.44946800 8.96154722 9.98972487 7.60935163 12.12669425 9.99850990 6.54150864 7.35951151 -0.53533173 9.93586059 15.12854344 8.27622865 12.05855144 11.25055460 8.36556045 0.04963077 2.71261779 8.06646435 9.34886401 11.76447392 -0.53533173 4.78662250 7.43623681 10.80064207 10.89775729 4.39543303 6.84407175 5.00385406 10.08216102 11.66237095 3.46469440 13.92527739 7.88254585 8.06274613 10.51249910 11.44054146 13.79728957 9.07017301 9.83810245 11.24461804 10.84924792 11.33177916 5.63461940 8.73965405 11.62928621 11.52842564 -1.53533173 10.33929074 9.74023613 1.63463973 3.75194568 9.61062569 9.73265062 9.78831132 10.08399648 14.86645636 10.79505024 10.73001552 9.31409853 5.41888818 15.12634637 2.92411889 12.16100906 10.65049810 10.04636487 9.11574518 8.26882455 10.52767395 0.609190 0.433610 0.422510 0.036229 0.047552 0.072684 0.067661 -0.278700 -1.027100 3.656900 1.692200 0.406570 -0.273680 0.061651 0.049966 3.389300 -0.663460 0.094346 0.094346 -0.630740 -0.640850 0.000000 -0.295440 -0.281920 -0.281920 -0.427350 -0.427350 -0.094196 0.648730 -0.308150 -0.259860 -0.656500 0.036229 0.072684 -0.034631 0.079591 0.094637 -0.289280 -1.032700 -1.076200 0.073833 0.073833 0.072844 -0.663370 -0.663370 -0.663370 -0.881570 0.061651 0.061651 -0.309790 -0.669700 0.094346 0.094346 0.067088 -0.630740 -0.658640 -0.349620 -0.668090 -0.295440 -0.281920 -0.084262 -0.427350 -0.094196 0.648730 -0.094856 0.031999 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.295 -0.295 0.000 0.000 -0.427 -0.427 0.430 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.295 -0.295 0.000 0.000 -0.427 -0.427 0.430 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 8.6668173 11.7136588 7.8000839 9.4689140 4.3715867 10.0655357 1.2720232 -1.5353317 8.7843656 6.6545186 NA 7.3538931 0.4646683 9.4072081 9.1564371 3.4646944 12.9826089 10.3602688 7.8222458 9.8998428 9.5980862 7.7291360 9.0729483 2.3715867 10.4337202 9.9897249 8.1926139 -1.5353317 10.6689590 4.9241236 12.0464825 11.6691118 7.0231145 9.0812424 10.1255807 8.6886951 2.1651402 2.1651402 0.7865964 6.3715833 10.0211996 9.3180031 8.9931476 2.0496656 8.4605878 7.1926144 10.3331303 4.2975803 9.5097707 -0.5353317 9.8194938 3.5521557 4.1371182 10.3822334 6.7631234 5.9076382 10.0197620 7.2460536 7.4562156 -1.5353317 13.1709737 0.7865964 10.4661018 NA 6.0940502 4.3226781 8.2361831 7.5888151 15.4979175 6.5090877 9.2061604 11.5275829 9.3373683 10.7584525 12.3493410 11.8039868 8.8602275 11.2712432 13.4065664 10.1026768 9.3488640 7.7149921 0.7865964 6.9605488 12.2717465 10.448756 8.487061 8.390990 9.785494 9.435518 9.661505 7.086746 7.797849 12.420616 6.822246 1.634640 7.639619 7.739631 10.851634 9.713214 9.685676 8.751251 13.896354 6.992170 10.895930 10.269228 10.230394 8.788874 9.901925 8.712621 NA 8.399136 6.567457 6.839733 10.897757 5.219583 9.771894 10.082161 7.811207 12.964913 9.983838 9.723260 11.952408 9.625195 9.079403 1.049631 TCGA-AC-A2FB 65 0 NA 1234 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 155.46.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 5.562279e-08 11.4041337 7.1692626 6.7498855 11.0267950 2.6227664 10.8157156 0.3748447 10.0834993 12.1704803 11.5119977 9.9313524 8.4422809 9.1070138 10.1938279 7.8073884 9.6245524 10.4589904 9.7958593 8.1660094 5.2203377 9.9447021 10.1409611 11.5142379 11.6953649 9.3478262 10.6351779 8.8717001 10.6700270 0.3748447 4.4192422 9.5086309 12.5432835 12.8000623 8.0241024 16.1648194 13.0014110 9.0168982 6.9101222 3.8984115 6.4027529 8.9616861 11.2380647 7.1027673 13.4635933 1.6967951 11.1570256 13.2653007 6.4246954 9.3413518 10.2382584 6.7542248 5.0042047 NA 14.4155493 10.5547556 3.3290375 8.1805905 0.6967951 5.4301280 9.9447021 10.5646710 9.3268595 12.5190267 9.9941493 10.1696684 3.8011069 11.9318314 10.0976540 7.4409356 8.3776613 11.6023120 11.4656205 14.5920090 8.3942702 10.9306339 11.7677005 9.3867726 2.6967728 2.7671675 8.9494401 9.4442962 12.3034573 NA 3.7671675 6.9895557 10.1805904 11.2550039 7.5671393 7.9275155 4.3055839 10.7199744 11.8102562 -1.6250440 13.9239994 4.9140047 7.6251448 12.3045672 11.1525127 12.7561190 7.5891657 10.5864306 11.1840116 10.7279519 11.5934097 5.1950247 7.9541626 12.7754591 11.6987456 0.9598443 10.2116857 9.2673893 3.1821997 3.5471783 10.5018735 10.3221181 10.3660140 9.2006002 15.2348300 10.2187675 10.2881098 7.6717625 4.3748447 15.3916547 10.5973394 13.3824432 13.4274569 10.2230781 9.2749584 8.0683333 10.2134752 -0.00241120 0.02589300 0.22731000 0.00027728 0.00027728 0.00041593 0.00444110 -0.00193990 -0.00193990 0.00000000 0.00000000 0.00000000 -0.00083160 -0.00041585 0.00277450 -0.00606510 -0.22084000 -0.01326400 -0.00449390 0.00722170 -0.00124730 0.00402430 -0.22231000 2.99330000 0.01656500 -0.00862340 -0.00862340 -0.00843850 -0.00069303 -0.00607870 -0.00241120 -0.00387790 0.00027728 0.00041593 0.00041593 0.00444110 0.00444110 -0.00193990 -0.00193990 -0.00498440 0.00013863 0.00013863 0.00000000 0.00249850 -0.00207840 -0.00207840 -0.00546390 -0.00041585 -0.00041585 0.00277450 -0.22158000 -0.01326400 -0.00449390 -0.00449390 -0.00087896 -0.00124730 0.00402430 -0.15669000 -0.22231000 0.76772000 0.00194180 -0.00405710 -0.00843850 -0.00069303 -0.00055444 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.65300545 11.45433122 7.76716415 9.55288885 6.82972147 10.14054695 6.23282765 -0.62504400 8.43283834 8.15620597 NA 8.16274881 4.25748590 10.08608313 9.26587051 2.54478210 10.13056863 9.37976910 12.13056857 10.35605696 9.81745298 7.65793506 10.70127587 4.74988819 8.26358987 10.16966837 5.25748968 NA 10.42605536 4.88264305 12.95068108 12.00192427 8.60846627 10.45399787 10.84041280 9.12889885 5.54477283 0.95984433 1.95980724 6.92943478 8.13473485 8.86870189 10.70436252 6.55972123 7.98280538 6.01870316 10.14096113 6.97475873 9.39652044 -1.62504400 10.88808057 4.74988819 4.66024981 9.54472126 5.97043956 6.27571295 9.98955629 9.00602362 8.76608990 NA 13.75395399 2.28172792 10.23864549 -0.04022984 8.06309680 6.25136311 7.77145117 8.81363820 13.043662 5.004205 8.438242 16.164819 10.576278 10.414794 13.463593 12.900918 8.918845 11.127227 13.541637 11.481900 9.444296 8.534718 -0.625044 7.349261 10.872199 11.054327 7.715208 8.790588 8.877678 9.466943 10.245261 9.028587 8.097654 11.695365 5.493788 -0.625044 7.248291 6.869503 11.729784 11.318277 8.487104 8.027692 13.767600 9.017801 9.326860 10.619805 11.784105 9.975689 10.649225 9.132236 8.166009 9.003502 8.556123 8.296687 11.255004 4.281735 10.903362 10.719974 7.576970 14.159865 10.145510 10.872948 13.298638 10.201792 9.937566 3.281743 TCGA-AC-A2FF NA 0 NA 1686 breast stage iib t2 n1 mx 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 3 asian not hispanic or latino 155.46.0 NA NA 2 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 0 11.2108968 10.8168754 6.9161530 11.4603092 3.8889672 10.4885582 1.6873295 10.2846425 11.9337192 7.5626233 9.7246073 8.2677820 9.3246842 9.5509016 6.2722976 9.3773329 10.2380816 9.6310219 8.7577240 4.6133372 10.5081520 9.6805563 10.1719564 11.1077162 10.0047474 10.6505199 7.0307422 10.5151506 1.6873295 2.0658480 9.8431650 12.4338492 12.8238133 8.3583453 13.3414338 12.4932399 9.5815463 7.4921112 4.7916734 7.8330121 9.0967257 10.2116806 7.5772951 12.3547125 3.6133313 10.9773537 13.2142741 5.8166176 9.1202941 10.1140190 10.0540942 4.0378302 -1.6344194 13.8279796 11.9831715 4.7747976 8.6345334 -0.6346434 6.4098016 9.7937668 10.2507218 10.0984221 12.1793883 10.3811702 10.0204901 2.7577273 11.9246643 9.9475487 5.8492237 8.1085579 4.3426898 11.0033900 14.4360937 8.3339009 11.8788876 11.6584472 8.5990265 2.7577273 2.9503751 8.4555192 9.7240580 12.1362771 -1.6344194 3.7577273 7.2357711 10.5824556 11.1335911 5.3196035 7.1791876 5.4946908 10.6782896 12.0719027 -1.6344194 13.9767486 5.0378302 7.5797255 11.9991966 10.8637574 12.8309094 7.8083503 10.3671667 11.0325183 10.7865117 11.7149644 5.4206879 8.4288019 12.2223185 12.2878053 -1.6344194 10.3773328 9.3491129 2.1727755 3.9898021 9.9084386 11.3747105 10.6519645 9.3311911 14.7587469 10.2965136 10.0847955 8.1533093 4.3426898 15.4986292 8.5663053 13.8169720 12.3225088 10.4189932 9.6198449 8.6461774 9.9058109 0.0081244 0.0081244 0.0107030 0.0113140 0.0171240 -0.0081624 0.0251170 0.0000000 0.0000000 0.0204830 0.0204830 0.0161460 0.0036427 0.0036427 -0.0510460 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0090984 -0.0193140 0.0217440 -0.0742770 -0.0742770 0.0070826 -0.0051227 -0.0051227 -0.0051227 0.0144700 0.0153080 0.0081244 -0.1124700 0.0113140 -0.0081624 -0.0081624 0.0251170 0.0284810 0.0000000 0.0000000 -0.0074720 0.0040243 0.0040243 0.0197830 0.0056919 -0.1767700 -0.1767700 -0.1767700 0.0036427 0.0036474 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0329960 -0.0013858 -0.0193140 0.0217440 -0.1654800 -0.0742770 -0.0742770 -0.1260300 -0.0051227 -0.0051227 0.0141900 0.0037465 -0.1188700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 10.4375393 12.5404104 8.2677820 10.2226102 4.9378434 9.9522465 2.2722920 2.6873295 8.6496525 10.2801656 -0.6346434 9.2040671 4.8889672 9.6929594 9.1194592 0.9503938 11.1925509 9.6426942 10.8355572 9.9997640 9.8929814 8.1085579 11.8235570 4.2448642 9.3540913 10.0204901 5.5252796 NA 10.2647637 4.3877761 13.4837395 12.5518305 9.6554255 10.4940455 9.1919552 9.2685355 4.5748584 1.9503564 0.6873295 -1.6344194 8.6239729 8.4985489 9.6720381 7.1951291 7.9969112 5.3311893 9.8751817 6.2171551 9.3569286 -1.6344194 11.7890479 2.9503751 5.9428359 9.6706819 6.4223154 7.5023982 9.8472062 9.4515429 9.3703293 -1.6344194 13.9309254 1.9503564 10.2342293 NA 8.5978276 7.6646151 8.0289647 9.2069711 13.0715250 5.4098016 9.0404815 13.3414338 10.7485710 10.1537172 12.3547125 12.0900272 9.0997691 11.0675794 12.8091273 10.5227536 9.7240580 8.3863868 -0.6346434 7.7769179 10.8360656 11.421367 6.757725 9.024511 8.359760 8.694082 10.173104 7.423398 7.356928 11.107716 5.555230 1.824849 7.244990 6.665393 12.194337 10.907955 8.656578 7.910371 12.705396 9.137721 10.098422 10.477846 11.139988 10.154125 10.853498 9.599026 NA 9.475029 8.408024 8.807313 11.133591 7.530313 10.609506 10.678290 7.396074 14.714429 10.153309 10.686207 12.474666 10.059329 10.165093 3.722958 TCGA-AC-A2FG 79 0 NA 1125 breast stage iib t2 n1a mx 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 1 white NA 155.46.0 NA NA 2 2 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.899646e-07 2.503025e-07 10.69607991 8.78309187 7.21164401 11.68737774 1.63672901 10.28239393 0.63672901 9.66279778 11.78447037 7.92367809 9.54862678 8.28299433 8.82408745 9.44516345 7.34639406 9.18684098 10.94564325 9.48796400 7.69201773 2.80665401 10.61901604 10.69765655 11.81892288 9.61115006 9.81622993 10.60492224 4.92213599 10.39551389 -1.94841908 3.33716873 8.12725203 13.67870825 12.34868915 7.29256459 13.11086387 13.42660868 9.91014261 6.96765281 5.00597031 6.82326278 8.77628695 10.30236749 8.15374860 12.83277400 1.95865711 11.17330648 12.68828430 8.01466884 9.41872904 11.17799345 9.17071401 6.50710008 NA 13.95522719 11.05792371 1.05178971 8.31855953 1.22169151 4.66648393 10.02547029 10.46381350 10.24036180 11.58510268 10.16323467 10.05704662 6.96765281 11.43709616 10.11853493 7.73652167 8.81581524 5.73827335 12.21652280 14.52171679 8.07766013 11.46672239 11.09650855 7.83640767 2.85913469 1.75219195 8.31151628 8.82902817 12.46559918 -1.94841908 4.59093131 6.93135567 9.42898339 11.06195133 6.32323675 5.60636227 4.97063742 10.15506082 12.05115645 0.05172012 13.37035107 5.98841203 7.89097678 12.35655205 11.33051280 12.99566133 8.11246870 10.22201105 10.88999205 11.08189003 11.31797387 4.94659051 8.66095178 12.12004742 10.90000463 6.21164499 10.13192421 9.03191261 2.63672901 4.05582904 9.61972901 10.91576557 10.39273568 9.08863350 14.97505401 10.30059005 9.71666464 8.64048753 4.65168318 15.92999754 9.74830591 13.02497702 12.38758199 10.09308990 9.88149562 8.43547733 10.90385572 0.00402430 0.94936000 1.01610000 0.00138680 -0.00398100 -0.00041585 0.00249690 -0.00360110 -0.00360110 0.00069327 0.00069327 0.00069327 -0.00051335 -0.00051335 0.00041593 0.00041593 0.00041593 -0.00138580 -0.00138580 0.01502800 0.00527490 0.01695700 -0.00346270 -0.00346270 -0.00346270 -0.02303000 -0.00013862 -0.00013862 0.01349200 0.00402430 0.00402430 -0.00152430 0.00138680 -0.00041585 -0.00041585 0.40894000 -0.00041585 -0.00360110 -0.00360110 -0.00360110 -0.00415460 -0.00415460 0.00069327 0.00129690 0.00129690 0.00129690 0.00610900 -0.00051335 0.01824300 -0.54462000 -0.54239000 -0.00138580 -0.00138580 -0.00138580 -0.00136550 0.00527490 0.00615690 -0.54179000 -0.00346270 -0.00346270 0.00805670 -0.02303000 -0.00013862 0.01349200 0.00124810 0.07656600 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9352181 12.2007261 5.3463932 9.7228717 2.2728891 10.6897562 0.8590949 1.5112150 8.6479627 9.2508318 -1.9484191 8.4702159 4.3916234 9.8941234 9.7737266 1.5112150 9.3999478 9.4494477 10.8777255 10.7504776 10.1003994 8.0074226 10.9450745 2.1392403 10.0153916 10.0570466 5.9765859 NA 10.0934321 4.7932404 12.7417163 12.4022288 8.0602014 10.4120714 7.3982871 9.1305909 6.5436258 1.7521920 -0.3632710 4.9586617 9.0817502 10.0233165 10.4397903 6.5595683 8.7045103 6.1655160 10.4840538 5.2996989 9.6192538 NA 13.2462990 4.0290553 5.4005004 9.6718232 5.0367055 5.7728727 9.1687666 7.9854634 8.0432947 -0.3632710 13.8837234 1.8591347 10.3252772 -0.3632710 7.8166445 5.7171088 8.1165155 9.0110505 12.1676416 4.2805926 8.8909768 13.1108639 10.6109111 10.9580999 12.8327740 12.9024482 9.4594656 10.8435464 13.2764153 10.8054076 8.8290282 9.6651021 -0.9481407 7.8671564 11.2799904 11.141885 7.475939 8.755676 8.849435 7.811661 10.083447 6.364656 7.798287 9.611150 5.890977 -0.363271 7.895694 5.986290 11.792397 10.388280 8.081060 7.777991 12.293533 6.575335 10.240362 10.439790 11.413580 9.498339 10.591659 8.799966 NA 8.844832 7.268325 7.057397 11.061951 6.734768 11.014308 10.155061 7.330222 14.273435 10.220132 10.205008 12.579433 10.128589 10.043649 2.806654 TCGA-AC-A2FK 45 0 NA 1180 breast stage iiic t2 n3a m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 3 NA hispanic or latino 167.47.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-08 0 11.1677807 10.1739021 7.2057561 11.0273184 2.1526377 10.8204656 0.8307421 10.3110017 11.7914423 9.1593913 9.7353509 8.4194310 9.3795382 10.3409860 6.0786440 9.0365097 10.2374528 10.0498849 8.7465956 3.0006491 10.9871155 11.1630327 13.7089110 10.8662028 9.9830011 10.8296593 5.5031420 10.9622518 -0.1692579 2.2901590 8.8764761 14.3137448 13.3045489 7.7965004 13.3285058 12.8769025 10.7529290 7.1926597 4.2901516 7.0450355 10.1339263 10.0583323 8.7330916 11.5436732 0.9715160 10.6816845 11.6952894 8.5518155 9.2644060 10.7954182 7.2485690 5.8968046 NA 13.4067631 9.5243862 5.4306298 9.0340644 1.4157046 5.3064482 10.4394332 10.0371203 10.1655482 12.4894857 10.6636063 9.9657843 1.8307015 12.2860436 10.3434568 6.7732302 8.2860434 7.4231731 10.0062659 15.1788047 7.9420083 11.9894838 11.8959642 8.1860677 2.7376002 4.1882664 9.0462493 9.7577535 13.7974921 NA 5.4156776 7.0786440 10.2100948 11.4779499 12.3022646 7.4454263 5.5172158 10.5093165 12.1533487 1.4157046 13.0647853 5.5856026 7.4709614 12.9549992 11.9593551 13.1249781 7.8391452 10.5784898 11.2783162 11.2075716 11.9627340 5.5989011 7.9548378 11.8706635 11.5835151 1.1526377 10.1509528 9.3679347 3.0786440 4.8107413 10.4831132 10.8264835 10.5123940 9.2379841 14.4765155 10.2379841 10.0649350 8.2506765 5.3064482 14.6602161 9.6169860 13.6372660 13.5835151 10.1661067 9.8342343 8.6918032 9.9778768 0.00479840 0.01776400 0.01776400 0.00132730 0.00132730 -0.00061384 -0.00308880 -0.00061384 -0.00061384 -0.00213770 -0.00213770 -0.00213770 -0.00435220 -0.00435220 0.00188230 0.00188230 0.00188230 -0.00379880 -0.00379880 0.00257620 -0.00094188 0.00118860 0.00000000 0.00000000 0.00000000 0.00841460 0.00841460 0.00841460 -0.00095537 0.00479840 0.01776400 0.00316160 0.00132730 -0.00061384 -0.00352200 -0.00308880 -0.00308880 -0.00061384 -0.00061384 -0.00061384 -0.00877380 -0.00877380 -0.00213770 0.00313150 0.00313150 0.00313150 0.00313150 -0.00435220 -0.00435220 0.00188230 0.00188230 -0.00379880 -0.00379880 -0.00379880 0.00257620 -0.00094188 0.00118860 -0.00144520 0.00000000 0.00000000 0.01092200 -0.00511750 0.00841460 -0.00095537 -0.00075242 -0.01731300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.3532979 12.0103145 7.0155912 10.5654260 3.9731337 11.1039291 1.4157046 3.8751116 8.4250409 9.9715461 1.4157046 8.2751724 4.3542758 9.3853053 9.3948659 1.1526377 9.2952620 10.3295655 10.9902723 10.0000151 9.5534897 8.2611688 10.9855344 2.9181763 10.0068894 9.9657843 7.7102995 -1.1694201 10.4076730 5.5989011 12.9072814 11.8863377 8.6202499 10.7629311 8.0595348 8.9008372 6.8968059 0.4156505 1.6380738 3.2901442 8.4100324 9.2358577 9.0168306 7.3464162 9.4979875 6.0205400 10.0637367 7.3967700 9.9015082 -1.1694201 12.1192941 4.4156776 6.2901479 9.4474213 5.2007044 6.4817688 8.9431560 7.7315831 8.6620235 1.4157046 13.8323884 1.1526377 10.7251552 NA 8.0106254 7.6251324 7.7790837 8.4287688 11.748918 3.531157 8.830716 13.328506 10.580623 10.002519 11.543673 12.253964 9.198961 11.355503 13.241896 11.475023 9.757754 7.923474 NA 7.650895 11.105386 11.223839 7.499601 9.054718 9.410975 7.205756 10.424495 7.092811 7.170566 10.866203 3.638074 5.306448 9.239046 5.688323 13.034370 10.945109 8.602206 8.218734 11.931050 7.438047 10.165548 10.114962 12.334294 10.352807 10.793974 9.677774 NA 9.387519 7.694902 7.449102 11.477950 6.298321 11.225447 10.509316 7.663606 14.384706 9.733845 10.401046 13.312957 10.263258 10.277283 2.415678 TCGA-AC-A2FM 87 1 792 NA breast stage iib t2 n1mi m0 2-10-2014 female 2004 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 185.42.0 NA NA 1 3 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 2.503025e-07 11.568154836 6.722188662 6.949789367 12.033922421 0.418459838 9.800491294 4.666336218 9.414174865 11.183901009 7.742588347 10.107532132 6.521696224 8.903230528 9.986838959 7.492549429 7.873735083 11.439561223 9.304866470 6.622978655 1.225768496 10.595204230 9.000549641 13.708102442 11.015296287 8.633940815 10.627556409 4.722187295 10.636949734 NA 3.173287369 7.065866309 10.260758089 12.787868756 6.206311110 14.443136186 13.806795055 8.688703157 9.352098395 6.827798705 5.957566416 8.476399511 10.441122292 4.941970166 13.503091560 0.418459838 8.732424560 13.657297557 1.877822762 9.715713743 11.565930652 9.478428064 4.199766559 -1.581648112 12.808774879 10.219307579 2.003386356 9.228979302 NA 4.372603915 10.052311141 9.966747972 9.990634273 9.593333414 9.774309376 9.662176832 1.877822762 11.064516375 11.063840967 7.153117258 6.708425918 1.003386356 11.656215192 13.562826981 9.947013267 11.521203595 11.329986947 6.694532010 1.003386356 6.999608841 7.744837200 8.812870403 9.684022708 -1.581648112 5.225760786 7.635153627 10.121013328 10.658602814 4.740333959 3.173287369 3.062259894 10.578909474 11.637727516 6.784730368 13.754844546 6.238586259 8.178295852 12.096127351 10.936077093 12.052878462 7.974913567 10.606378283 10.067663856 9.851993217 10.531173035 4.861349980 8.819287216 11.142495192 12.325110459 0.003314389 10.363485734 9.528238423 2.118858038 3.595133630 8.668705966 11.053445559 10.197716634 8.656812390 14.830597129 10.789912119 10.471654895 8.010864859 1.877822762 14.467320256 9.079294901 11.437303332 10.066765295 9.713028503 9.134369587 8.184936817 10.753513282 -0.655680 0.326560 0.302980 0.273630 0.257690 -0.026767 -0.021235 -0.123300 -0.123300 1.857100 1.857100 1.827800 -0.093453 -0.093453 0.388490 0.986380 -0.661420 1.876900 0.492860 0.365640 0.787750 -0.155280 -0.123690 0.857000 0.857000 3.372500 2.644100 3.656900 0.388660 -0.643580 -0.655680 -0.581060 0.273630 0.452410 -0.022332 -0.021235 -0.029922 -0.123300 -0.123300 -0.098682 0.273480 -0.127460 1.857100 0.253240 0.253240 0.253240 0.287070 -0.093453 -0.073076 0.388490 -0.661420 -1.161300 0.492860 0.582020 0.559390 0.782580 -0.158090 -0.649030 -0.123690 0.857000 0.417470 -0.623220 -0.654450 0.388660 0.254490 -0.638590 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 7.8128704 11.3296124 3.4184059 9.9657843 1.5883249 11.4853378 3.5476966 NA 8.7781573 7.7176154 NA 6.9142631 3.7403340 9.8336213 10.6220616 5.2128222 8.4750456 9.8171514 12.7259643 11.4047831 9.9262668 10.4250844 10.9249632 1.7403232 10.2144474 9.6621768 4.6851945 4.1732954 11.6590500 4.0331146 11.2353913 11.4610931 7.3432204 9.9667480 6.3372704 9.2281758 4.3491459 1.8778228 2.1188580 3.6663362 8.5617908 9.0784036 10.2124173 4.3726039 7.3192747 8.0961274 10.5493000 5.5782776 10.3722404 NA 10.7806256 7.6991782 5.0033684 9.5874747 5.3772487 0.7403663 8.2732762 8.9662664 4.3491459 -1.5816481 13.1875740 1.7403232 10.6110087 NA 7.5085198 5.9419702 8.2903129 9.0987672 14.221774273 6.827798705 8.841523779 14.443136186 10.190095286 10.410283858 13.503091560 13.509305805 8.292943215 11.095907151 12.131686836 11.632878632 8.812870403 8.198127245 0.003314389 8.137796541 11.866524024 11.5003904 5.8277987 8.2528787 10.6202253 9.1632416 10.8274592 5.2763887 9.6863648 11.0152963 7.5005567 2.1188580 9.3565171 7.5517298 9.2880016 10.3139830 8.9172569 10.2791068 11.8718070 3.4184059 9.9906343 10.8623872 12.2380879 9.9604723 10.6772682 8.8991980 -1.5816481 8.8603039 5.2763887 3.8107207 10.6586028 4.0908365 11.8140757 10.5789095 6.5833145 12.5441440 10.1373686 9.5553988 12.2050857 10.5605147 10.0358751 0.7403663 TCGA-AC-A2FO 65 0 NA 1542 breast stage iib t2 n1 mx 2-10-2014 female 2005 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 167.47.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.112456e-07 11.3888440 9.2493773 7.0174521 11.9272194 2.2187192 9.8804884 NA 9.6491627 11.4810009 10.6358595 9.2438497 7.9443607 9.5923004 10.2452337 7.6998369 9.3479933 9.9618616 9.6706081 7.9669028 3.4917249 10.9545483 9.9551121 12.7178087 11.5511198 9.7468388 10.5357459 6.9375280 10.1897748 -1.3662433 -1.3662433 9.5689128 11.9114710 12.7948009 7.2187105 13.5625437 13.6162957 9.4555216 6.5644849 2.8816842 6.9868944 8.7118985 9.4273510 7.7105633 12.2823300 -0.3662433 10.4151074 12.9535610 4.8816744 9.3591139 10.6060096 9.4224660 8.7973973 NA 13.9130464 10.3079400 2.4411116 8.1395595 NA 5.0600128 10.1084677 10.0415466 9.5755290 11.4151075 10.2224624 9.7923574 3.7212086 11.0893318 10.1738757 6.7317793 7.7474901 0.9556848 11.1117589 14.8103884 8.4795200 11.3752147 10.9733194 8.5541007 2.8816842 7.2521337 7.9329558 9.1873771 11.3859193 NA 4.3341892 6.7105640 10.1563292 11.1724217 5.1573106 7.1135276 4.6337451 10.4427119 11.7312861 4.6337451 13.3763730 5.9556755 7.8011658 11.6971428 11.8514026 12.7364616 7.9005342 10.0082439 10.8706589 10.8276550 10.3865465 4.9005336 8.5270492 11.8669180 11.2352864 7.8721522 10.2443113 9.1738757 1.8036817 4.1172379 9.6103119 10.3432623 10.2364466 8.8661686 14.4854236 10.3890526 9.7973974 7.9758222 3.5406349 15.9808240 7.3785818 12.9634039 12.7950371 9.5179183 9.1873771 8.1670774 10.0223786 -0.01078400 -0.01078400 0.47101000 -0.12603000 -0.12603000 0.03409500 -0.00401620 -0.05145100 -0.05145100 2.76610000 -0.32729000 0.10322000 0.56401000 0.02502500 0.01369300 0.01369300 0.01369300 0.07915900 0.19725000 -0.05185600 -0.01023200 -0.00097017 0.03171800 0.03171800 0.03171800 0.13776000 0.13776000 0.13776000 1.73390000 0.04131700 -0.01078400 0.02226400 -0.12603000 -0.03232000 0.05979400 -0.00401620 -0.00401620 -0.05145100 -0.05145100 -0.07214000 -0.06498400 -0.02342900 -0.36181000 -0.37850000 -0.00747200 -0.00747200 -0.04083900 0.02502500 0.03919500 0.01369300 -0.37865000 0.08204300 -0.33918000 -0.33918000 -0.05185600 -0.01023200 0.00791750 -0.32331000 0.03171800 0.03171800 0.04623700 0.13776000 0.13776000 0.09304000 0.00208050 0.01112100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.228 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.228 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 10.1988498 12.3562351 7.3582617 9.8124125 5.6998375 10.7268351 5.0931798 0.2187192 8.4808051 7.9846867 NA 9.0215175 4.3886373 9.8934910 9.6045727 1.8036817 10.3505672 9.4289756 12.4745257 9.9724842 9.7525136 7.7078892 10.7468387 3.0931714 8.5179181 9.7923574 5.8625655 -1.3662433 10.7955095 3.6781395 12.3207953 11.9676019 8.6781420 10.4511311 8.9203055 9.1940806 5.1573106 1.6337567 NA 1.8036817 8.8769218 9.2158897 9.7917262 6.5995320 6.1013538 5.8911348 10.4602963 5.3752132 9.5784599 0.2187192 10.8887763 3.9191494 5.1415431 9.7704442 5.6671712 7.2299378 9.9785984 9.6052913 8.7198840 1.4411116 13.6486400 1.4411116 10.4559202 NA 7.4666377 5.8529152 8.0388894 9.1988499 13.062929 5.060013 8.592300 13.562544 10.460296 10.389053 12.282330 12.321779 9.292852 10.801479 13.473198 11.470981 9.187377 9.029282 1.633757 7.788566 11.359753 10.9688589 6.0346273 9.0011624 7.9098721 7.6561152 10.1519336 8.3079398 8.4745257 11.5511198 6.4539274 -0.3662433 5.2336619 6.6270829 9.9657843 10.7617420 8.3919709 8.4183827 11.6875040 7.8625667 9.5755290 10.5861250 11.1089745 9.5893976 10.4224661 8.5224909 NA 9.0377822 7.3743040 8.8529162 11.1724217 6.2036025 10.7716995 10.4427119 7.2703720 13.9315231 10.3612428 10.3986193 12.7293096 10.1548573 9.8074248 3.0931714 TCGA-AC-A2QH 58 0 NA 31 breast stage iib t3 n0 mx 2-10-2014 female 2011 NA NA other specify yes 0 white not hispanic or latino 177.46.0 NA NA 4 1 NA NA 2 2 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 12.3500938 8.3063830 5.8913463 10.7603395 NA 8.8532774 NA 10.1413807 11.4582452 8.6580583 9.4114184 6.0789727 9.4578224 9.8825523 6.9405885 7.1137380 5.6756155 10.9038148 8.6162382 3.1808480 11.1067436 10.7444817 3.7214164 10.5431945 9.4253240 10.6469749 1.3063789 10.0690418 7.0877429 3.4218561 10.8423063 13.1447990 12.8343258 9.4305042 10.2162760 4.4763104 11.5011398 6.5027809 3.0433445 9.6222872 9.2702423 8.7129424 8.1890259 6.9112446 NA 10.4829717 7.3434727 4.9308745 9.6814224 2.8913414 9.2172756 4.0433445 1.3063789 14.0073738 8.5384039 3.7214164 7.5223202 3.0433445 4.8913463 9.1849447 10.7430945 11.2027154 9.1518730 9.1890259 9.4270528 -0.2785836 9.3867564 10.5415994 5.5794004 6.9502386 NA 5.2760090 13.9838090 8.7635722 12.6816034 10.3157451 8.3063830 3.8913414 6.8609715 8.9811637 9.3471292 10.2625170 -0.2785836 8.2331729 3.3063789 11.3603089 10.2062433 9.6770704 6.3938452 5.5287745 9.4270528 12.1424333 NA 13.5173586 3.5287713 7.1808520 11.6697877 10.8442484 12.4922908 8.8377645 11.4369535 10.6987004 10.6700797 11.0166154 4.8507044 9.9161773 12.0972744 8.8988399 1.3063789 10.3498660 9.8403616 -0.2785836 5.1140796 9.4166487 12.3075565 10.1705691 9.3471292 13.2466965 11.1471609 9.2988494 6.1308115 2.7214164 11.3544156 5.0433489 13.2009481 11.6951178 9.7424004 10.6055910 7.3938460 9.2338646 0.086050 0.086050 0.098270 0.035383 0.240930 -0.036674 0.084643 0.709830 -0.051991 -0.747770 -0.629030 1.249500 -0.676210 -0.256380 -0.407160 -0.670390 -0.670390 0.792200 -0.056307 -0.331790 -0.621500 -0.064374 3.656900 -0.689880 0.230240 -0.245570 0.063509 0.063509 0.146680 0.024548 0.086050 -0.264800 0.048688 0.129180 -0.081339 0.084643 0.027778 0.709830 -0.446520 1.102400 0.581120 -0.965770 0.111550 -0.228590 -0.466770 -0.427460 -0.415990 -0.278920 -0.268530 -0.636610 -0.394360 0.792200 -0.071155 -0.056269 -0.336300 -0.621500 0.334960 -0.055634 3.163000 -0.689880 0.569520 -0.245570 0.063509 0.112720 0.658660 -0.148360 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -0.375 0.063 -0.421 -0.421 0.000 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -0.375 0.063 -0.421 -0.421 0.000 7.2760090 15.4555743 7.9975448 10.2988492 3.7214164 11.9687546 0.7214164 -0.2785836 10.3480420 10.0478500 1.7214164 8.9259917 5.1476852 10.7072624 9.0545758 3.7214164 12.0707017 10.8609718 7.3361307 9.3398059 9.3682312 7.2912757 11.8397127 2.5287713 6.6283114 9.4270528 5.3063826 NA 11.7399684 10.9217060 12.6983425 13.4768297 7.0433489 8.7794121 9.5287754 10.3129428 5.2449822 4.3063862 0.7214164 3.1808480 8.7072625 9.3231913 5.0068231 6.9502386 5.9029201 4.7214219 10.4738011 5.4493402 9.9764490 NA 11.6466040 5.9693485 6.5027809 9.3925192 7.1344561 NA 9.9050559 8.2172753 0.7214164 3.3063789 14.4186052 -0.2785836 11.0456010 NA 10.4339475 6.6756170 8.0160411 8.0343032 10.525455 7.692964 8.950239 10.216276 9.530385 10.668327 6.911245 9.400901 8.113738 11.621533 12.240811 11.221764 9.347129 9.354416 2.306379 8.168504 10.858412 11.6268075 0.7214164 8.1726315 8.9740859 7.8351624 10.7176609 4.6756184 6.8088831 10.5431945 3.3063789 6.9210923 10.5117690 8.7383122 15.0479904 9.4879493 7.9740859 9.1664353 10.2400736 3.3063789 11.2027154 9.6447479 9.9645944 10.1581320 10.0021913 8.4729645 -0.2785836 9.6056062 8.9508160 NA 10.2062433 10.5392036 10.8186757 9.4270528 7.7326477 14.4644666 10.0365700 9.7603394 11.3026210 11.7069067 9.7821164 0.7214164 TCGA-AC-A2QI 76 0 NA 28 breast stage iiia t3 n1a mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 185.42.0 NA NA 2 2 NA NA 3 3 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.501815e-06 5.562279e-07 10.7410600 6.6541333 6.7294984 11.3735269 -0.0693005 10.0535841 -0.6542630 9.7715340 11.5949071 8.6889793 9.5800122 7.7825049 8.9521987 9.6114087 6.6172573 9.4232769 11.1904994 9.6346597 7.2970786 1.5157125 10.6552700 11.0811381 11.1236654 9.5132118 8.8644468 10.3112172 6.9568187 10.1365494 -0.6542630 -0.6542630 8.4891768 10.9799240 12.2905057 6.8215266 13.6196985 13.3635155 10.3068815 7.7251720 4.8376456 7.1006813 8.2720895 8.0634700 8.0956629 12.9079764 -0.6542630 10.8331312 13.9807181 6.7928775 9.4044146 10.2394743 6.1006813 8.3792168 NA 14.1411129 10.6288560 3.8693582 8.5107005 NA 4.6677219 10.0057896 9.7604788 9.3479055 11.2732012 10.1446704 10.4189310 1.9307373 11.0927277 10.2646569 7.1402091 8.7678584 0.9307752 10.9593529 14.9405410 7.3255042 10.5479175 10.9733275 8.9326335 1.5157125 1.1531568 9.2631657 8.5031404 11.1753182 -1.6542630 6.0322948 7.8336339 9.1458845 10.7923600 4.0182158 6.1205800 5.4647336 10.4831050 11.5903061 4.1531487 13.9194112 5.9080371 6.9824187 11.8970212 14.0089069 12.5770148 8.3415606 10.5075553 10.5509760 10.7061524 10.9694465 3.8693582 8.5107005 11.3415608 11.7292279 -1.6542630 10.3450891 8.8859218 2.0462466 3.4349484 9.8897920 10.1487139 9.8902751 9.1255129 15.1187396 10.1778925 9.4802199 8.7488057 3.2999919 14.8978322 8.3344784 12.9449510 12.4624625 9.7699600 9.9833241 8.2765311 11.1959316 -0.0177000 1.0446000 1.0446000 0.0180690 0.0180690 -0.2260400 0.0070482 0.0066886 0.0316830 -0.0080585 -0.0080585 -0.0080585 -0.2343800 -0.2343800 0.0116440 0.0116440 0.0116440 -0.5769600 0.0193280 0.0249350 0.0135970 0.0259170 -0.5816900 -0.0155000 -0.0155000 0.0051015 0.0051015 -0.0029067 0.0000000 -0.0177000 -0.0177000 -0.0327570 0.0180690 -0.2250500 -0.2285000 -0.0039529 0.0168100 -0.6289600 0.0316830 0.0316830 0.0119230 0.0072549 -0.0080585 -0.2254200 -0.2254200 -0.2254200 -0.2254200 -0.2343800 -0.2343800 0.0116440 -0.5778500 -0.5769600 0.0193280 0.0193280 0.0249350 0.0135970 0.0165310 -0.6070600 -0.5816900 -0.0155000 0.0076231 0.0051015 -0.0029067 0.0194680 0.0478010 0.0221290 -0.234 -0.234 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.030 -0.584 -0.566 0.000 0.000 0.000 0.000 0.000 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.225 -0.225 0.000 -0.234 -0.234 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.030 -0.584 -0.566 0.000 0.000 0.000 0.000 0.000 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.225 -0.225 0.000 9.2765309 14.6860958 6.3681607 10.3007169 2.7449576 11.4337536 3.0462291 -0.6542630 8.7793789 8.5269460 -0.0693005 8.0686010 3.0462291 9.8535882 9.4365677 -0.6542630 8.5281880 9.4431673 10.0208686 10.1209923 9.9143815 7.4332566 11.8423978 4.3016169 9.4132281 10.4189310 3.6677219 NA 11.0790208 2.4332533 12.0350272 11.9335711 8.4776506 9.9377834 7.9932520 9.4647346 8.9549724 1.5157125 0.9307752 2.3457938 8.6811839 9.5595054 10.3929176 3.5552517 6.8366450 6.0805042 9.8873743 6.4438254 9.5423958 0.6677559 11.5581380 3.2999919 5.1402101 9.7855259 6.6851987 4.4332533 9.8351399 8.6392655 6.1073447 3.9307563 13.2868412 1.3457938 10.3643415 NA 6.8810687 4.8849544 8.1385841 9.1148050 12.313684 4.299992 8.377840 13.619698 10.315899 10.664054 12.907976 11.398531 9.143260 9.640414 13.346058 9.936848 8.503140 8.435906 NA 7.354222 11.478454 11.5107005 6.9568187 9.0703075 7.9715027 7.7230042 10.4810733 8.1255132 7.4464556 9.5132118 7.9769707 -0.0693005 6.1271524 5.5227149 11.0559543 10.2620463 8.3202080 9.0788089 11.2151947 6.0737131 9.3479055 10.5390109 10.7902909 10.8798533 10.2330142 8.3570210 1.6677105 9.4153171 6.3057955 6.4543174 10.7923600 6.4172568 10.6799048 10.4831050 7.2099797 13.4836653 10.0918880 10.0186609 13.2161583 11.1842097 9.2824315 1.1531568 TCGA-AC-A2QJ 48 0 NA 69 breast stage iiib t4b n0 m0 2-10-2014 female 2011 NA NA other specify yes 0 NA hispanic or latino 185.42.0 NA NA 2 1 NA NA 2 5 2 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.016312e-07 3.040189e-08 11.8461713 3.8168864 4.4018489 11.1448109 1.2319239 7.4655411 NA 7.3508623 9.8594554 9.0852310 8.2431487 6.1145648 7.8539732 10.3631355 5.9598420 7.8649166 6.8318342 9.4030983 7.1084387 8.7377331 11.6349336 12.7995212 8.6047867 8.5561021 8.0930087 8.8036743 6.6665493 8.7237746 2.6913555 1.2319239 8.1206650 10.3365203 10.4951908 9.2092016 11.1810187 6.9598420 14.1325054 5.8017769 NA 9.0914563 6.7788157 5.2091999 7.2598280 3.1388145 NA 12.8882347 6.8466312 3.4798514 10.7864961 5.6913527 6.8017769 5.3193831 2.8168864 15.3600927 12.7491960 3.8168864 8.6790046 NA 4.1861202 8.8901329 8.1626587 8.0648117 7.0132814 7.0584702 11.3637785 2.6913555 8.0961079 9.7574423 5.7554832 7.9008064 1.5538520 3.4798514 14.7221457 3.3312179 8.8865575 7.5080459 7.0328216 3.4798514 NA 7.8281111 6.6497735 9.0505039 NA 8.0099988 7.5173237 8.7633030 10.0663926 6.9733886 6.7476210 6.6581858 8.1358032 11.0871794 2.0392788 13.7257770 3.1388145 4.1861202 11.2632782 12.7791776 10.7451557 10.2056189 11.1813836 9.6391893 9.2206061 9.7691400 -0.7680761 10.3968284 10.1259814 7.8972574 -0.7680761 10.9427280 8.8539735 2.2319239 1.5538520 8.2980108 8.6913530 8.1832061 8.8336924 15.5051708 10.4118306 7.9254085 5.6069603 0.8168864 11.1391878 8.4559231 12.0065027 11.9254085 9.2912660 9.9166703 5.0648096 9.0231985 0.314020 0.264200 0.236590 0.298380 0.290340 0.152030 0.281840 -0.016292 -0.016292 -0.173860 -0.173860 1.789200 -0.272600 -0.272600 -0.054825 -0.054825 -0.054825 -0.102370 -0.121200 -0.218370 -0.109780 -0.160080 -0.384810 0.164000 0.164000 -0.060748 -0.060748 -0.060748 0.275050 0.396450 0.314020 -0.030813 0.363130 0.173320 0.145950 0.281690 0.252610 -0.016292 -0.016292 -0.016292 0.298510 0.283270 -0.173860 0.862150 -1.223700 -0.433820 -0.415970 -0.272600 -0.272600 -0.054825 -0.067847 -0.102370 -0.121200 -0.102890 -0.218370 -0.102770 -0.182570 0.026654 -0.396790 0.164000 -0.176890 -0.060748 -0.060748 0.275050 0.262470 0.356590 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.120 -0.120 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.120 -0.120 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 8.8612783 16.3209789 3.1388145 11.4374094 3.8168864 10.1678233 1.2319239 1.5538520 10.4340454 9.4762855 NA 6.8539732 7.8685460 9.9984505 9.2459420 3.9323636 8.6434327 8.0457029 7.4364925 11.3502138 9.0094236 5.2091999 12.5527221 2.9323636 6.4413756 11.3637785 1.5538520 NA 11.6460783 0.8168864 13.5269012 13.9435348 9.7237746 8.3508627 10.1130355 11.1331656 3.5538520 3.2319239 -0.7680761 0.2319239 9.1582176 12.2990197 4.8757801 8.0165565 7.6377435 9.4438099 9.3778536 6.1022865 9.7662244 2.2319239 10.3127391 3.2319239 3.2319239 8.0537272 7.7422508 -0.7680761 11.1890236 11.8105301 5.5173229 12.2686103 13.8098814 0.2319239 11.8587713 NA 7.6581865 NA 7.3612043 9.1492937 11.119961 7.831834 8.089903 11.181019 9.184663 10.917108 3.138814 6.809350 9.042493 9.184663 12.511967 12.629329 6.649774 9.921046 5.276314 6.517325 7.376580 10.2556759 3.8168864 8.3791266 6.8685460 7.2708410 7.8479556 7.8539732 6.7633027 8.5561021 5.4018455 1.8168864 8.6954458 8.3975570 10.2248599 9.8963689 7.3612043 11.4471512 3.9868114 4.0392788 8.0648117 10.6172448 7.4118304 10.6655070 10.1183802 5.3816675 NA 10.6681646 6.7710800 4.4413772 10.0663926 7.2319220 9.8594554 8.1358032 7.5583511 14.4591238 11.0548907 9.8972575 11.6631580 11.3682719 8.3033840 0.2319239 TCGA-AC-A3BB 46 0 NA 30 breast stage iiia t3 n2a mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 5 black or african american not hispanic or latino 185.42.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.816548e-07 3.040189e-07 11.2599002 8.8659315 5.9262130 11.6777565 1.8558303 9.1365939 NA 9.0227393 11.3035263 9.1586905 9.5569562 7.4437881 8.7125597 9.8308112 5.1632532 9.5714419 10.4123291 9.5444232 7.5755544 4.6836403 10.7681137 10.9946068 11.7691613 10.7056973 8.9974194 10.3460723 8.0416898 9.8653719 0.5338623 1.9933121 9.1822526 10.7311117 12.3650043 7.7675144 12.8103102 12.5715277 10.6618893 7.4646323 5.5782897 7.4042594 8.2481406 8.7187702 8.1263519 12.4158693 0.1188913 11.6796679 13.2731482 6.2133745 9.8924253 10.1113238 9.7782589 6.8914471 -1.4659384 14.6685802 12.6595563 3.4407795 8.6567230 -1.4659384 4.3667838 9.6286325 9.6120458 9.3217976 11.7206283 9.0476226 10.2871117 2.7038095 10.5728140 10.5225797 7.1113235 8.1300845 5.7138030 10.5289554 14.6576931 7.3234610 10.7921666 10.1586905 7.8123442 -1.4659384 6.8376759 8.4271963 8.4362701 12.1885310 NA 4.0574589 7.7603075 9.4851796 10.7933440 5.2753610 6.4467839 5.3667838 9.7711050 11.6053573 3.4407795 13.7912460 6.3980818 7.3825177 12.4954351 13.5507033 12.3993383 8.3234286 10.2690279 10.3000098 10.0222423 10.3246508 3.1777584 9.4683231 11.1976754 10.5918867 0.1188913 10.6407850 8.7603071 0.1188913 3.7054250 8.8692854 10.8172728 9.5638724 8.8065248 15.0483008 9.9278217 8.9747642 8.3004239 3.1777584 14.5201148 9.5486129 14.1872439 12.8708896 9.9612079 9.6187034 7.8467779 10.3367142 -0.2123100 0.4164700 0.4077700 0.0169850 0.0200630 -0.1914900 0.0058309 -0.2131600 -0.3233300 -0.0041546 -0.0041546 -0.0041546 0.0093098 0.0066653 0.0072217 0.0072217 0.0058053 0.0088378 0.0101460 -0.1957500 0.0079175 -0.0056757 -0.2223100 -0.2223100 -0.2223100 0.0087528 0.0087528 0.0087528 -0.0022168 -0.2123100 -0.2123100 -0.0044312 0.0169850 -0.2051000 -0.1914900 0.0058309 0.0058309 -0.2131600 -0.3930100 -0.2313400 0.0077783 0.0077783 -0.0041546 0.0227250 0.0227250 0.0227250 0.0126550 0.0066653 0.0036576 0.0072217 0.0058053 0.0088378 0.0025198 0.0066653 -0.1957500 0.0079175 -0.0056757 -0.4407000 -0.2223100 -0.2223100 -0.4221100 0.0087528 0.0087528 -0.0022168 0.0291840 -0.4292000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.2098520 14.2602728 6.4764092 10.7584996 5.7627129 10.4826272 5.4527569 NA 9.1495246 9.9262124 -0.4661377 8.5338950 5.9933256 9.7883332 9.7883332 1.5339121 9.5817005 8.8204528 10.5762384 11.2728317 9.4243341 7.1885315 11.7850815 3.9933302 8.7212472 10.2871117 7.2686047 NA 10.9427554 2.7038095 12.9357078 12.0482392 8.8692854 9.5999842 8.6187034 9.8152454 5.1037494 NA -1.4659384 2.1188580 9.0446591 9.9422248 10.0980445 6.5111755 9.0889634 8.1338080 9.6689630 4.7237169 9.2584089 0.1188913 11.3337837 3.2887867 4.1486088 9.6235375 7.4479511 6.7912827 10.2373661 8.4851796 8.9758015 0.8558303 14.1023856 2.5338872 10.5566095 -1.4659384 8.5714421 6.2618147 7.2133755 8.8692854 11.9659018 4.7038205 8.3730987 12.8103102 10.2063203 10.6676794 12.4158693 11.5056182 9.2854390 10.2472815 13.0520563 11.7119373 8.4362701 8.9401001 0.8558303 6.6734462 10.7569917 11.4751260 6.9851065 8.8204528 8.6721668 7.3667847 10.3669352 8.5810190 8.9304996 10.7056973 8.2820876 4.4165358 4.9432837 6.7894424 10.1028011 10.7378547 7.7794475 9.2273820 9.5183134 7.7912827 9.3217976 10.8493276 10.3727050 10.1929989 10.4738414 8.2635157 0.8558303 10.0726078 7.1113235 8.3037328 10.7933440 7.2652137 10.9283577 9.7711050 6.5168882 14.1122382 10.0247459 10.5079510 12.6196164 11.3809523 9.0106411 1.1188248 TCGA-AC-A3HN 87 0 NA 21 breast stage iib t2 n1a mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 202.42.0 NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 10.9154400 9.5704109 6.4801973 11.5006648 1.7755142 10.5868081 0.6600159 10.1343999 11.4066722 7.9576987 9.8261811 8.0694089 8.8848235 9.6693801 6.3558268 8.7430541 10.8438601 9.7211641 7.9423345 4.9205458 11.2842042 10.6113027 9.8992187 11.1243935 8.9079455 10.3362689 6.8629584 10.1578632 0.3970362 5.6064363 9.1084785 12.6044860 12.0682592 7.3300842 13.2422384 12.8751970 10.3788362 6.9939189 4.0292497 7.2990569 8.5749015 9.7107736 8.4992216 12.9253888 0.8824474 10.6858496 13.6642677 7.7171075 9.7374747 9.9542558 8.6524843 7.1438342 -0.3398928 14.6993005 12.1002366 3.6296480 9.3347986 -1.9246727 5.6219493 9.9075499 10.1611917 10.2062693 11.2003075 10.0873308 10.1697930 1.8824083 11.4979087 10.7096397 7.2499809 8.6534280 0.6600159 9.6842342 14.7749532 8.8478895 11.7908030 11.1022703 7.9079452 1.7755142 5.3324430 8.7961545 9.0771671 12.3969131 -1.9246727 5.5907547 7.3488512 9.8731222 10.9967105 5.3788376 6.9909344 5.8232475 10.3394981 11.5191644 2.5986272 13.5336864 5.1835818 7.2599306 12.0538553 13.5112465 12.7915534 8.3662260 10.1930232 10.7089588 10.6589585 11.3724017 4.7615566 8.8432399 11.1418174 9.1015789 NA 10.4746004 8.9142592 1.3969815 3.9099651 9.4705895 10.5439340 10.0226924 8.8976262 14.6647651 10.2314546 9.5185170 8.7332669 3.4673708 14.7182634 9.9890668 13.8481174 12.2868677 10.0343329 9.7184608 8.5396012 10.5765941 -0.00758830 0.40744000 0.40333000 -0.00912860 -0.00912860 -0.01523000 0.43277000 -0.00995650 -0.00995650 -0.00799570 -0.00799570 -0.00470790 0.00708260 0.00708260 0.00000000 0.56632000 -0.42236000 0.00041593 0.00041593 -0.00401620 0.00263570 0.01572700 0.02232000 0.01998000 0.01998000 0.03552400 0.03073200 0.03073200 0.02862200 0.03764100 -0.00758830 -0.00387790 -0.00912860 0.03298600 -0.01523000 0.32527000 0.36166000 -0.00995650 -0.00995650 -0.00995650 0.02048300 -0.00979960 -0.00172860 0.00305220 0.00305220 0.00305220 0.00305220 0.00708260 0.00708260 0.00000000 -0.42236000 0.00041593 0.00041593 0.00041593 -0.00567570 0.00263570 0.01572700 -0.42484000 0.03608800 0.01998000 -0.00337760 0.03552400 0.03073200 0.01082400 0.00791750 -0.39419000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.68238579 14.33564427 6.07505550 10.96075184 4.50115249 11.17325207 3.98194396 2.16253232 8.75277501 8.92914476 -0.33989283 8.23473745 4.88240829 9.87190632 9.65907845 2.77549308 9.94965267 9.33597491 11.15487354 10.19334769 9.65850499 7.71891161 11.79946272 3.64399468 8.68515736 10.16979300 4.50131812 NA 11.04588038 2.46738383 12.27150391 12.28504182 8.40597237 9.80891818 8.80552560 9.32535381 5.06374021 1.66001587 1.39698146 4.32298088 8.62098515 9.28937456 9.47005402 6.64491041 8.41398116 6.87595572 10.04336228 6.56289569 9.48709599 0.07505336 12.50164783 5.50968318 5.47593442 9.11249945 6.33008328 6.86621811 9.94503482 8.79273174 8.96455949 0.88244742 13.35662333 0.07505336 10.39529195 NA 8.42820228 5.87595449 7.52420397 8.96455949 13.3150757 5.6219493 8.3947276 13.2422384 10.5499528 10.4939622 12.9253888 11.9543515 8.6494599 10.6842342 13.1354559 10.0701160 9.0771671 8.9039851 0.6600159 7.2990569 10.5401117 11.457544 7.708051 8.693441 9.078573 8.412677 10.405112 8.037952 7.990935 11.124394 7.146518 4.075053 5.754535 7.418596 11.427927 10.606924 7.648703 9.168473 11.837749 7.536535 10.206269 10.505769 11.343451 10.935754 10.760023 8.642061 NA 9.658735 8.601574 7.582850 10.996710 6.888837 10.712738 10.339498 7.227341 13.718151 10.124904 10.005054 12.783062 10.695275 9.929145 3.629648 TCGA-AC-A3OD 68 0 NA 451 breast stage iib t2 n1mi mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 216.36.0 NA NA 3 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4.727937e-07 5.562279e-08 10.9698190 8.5571776 6.9143744 11.5922783 1.8482774 10.8374434 0.8483175 9.9227243 11.2891546 9.6149984 9.8331785 8.0326100 9.0909304 8.8737326 8.8792591 9.1331738 9.6716527 9.6509813 8.0951580 4.7227556 11.5378953 9.5417725 10.8219031 11.5600480 9.3081725 10.5039156 7.6684645 11.2309083 0.6783424 3.2329523 9.3551991 12.3596538 12.9975386 8.4937438 12.9754200 13.2585601 9.7038461 7.3365717 4.0533981 6.6783607 8.6216080 9.2415568 7.1418844 12.8463666 -0.3215675 10.5080832 12.8620734 8.1275090 9.3371656 10.8890318 9.2661379 5.3926059 NA 14.0909290 10.9553688 3.2930761 8.5363416 -2.3219281 4.3648595 10.2661380 10.3020134 9.3289634 10.8040968 10.1601598 10.0257050 6.0620656 11.2726851 10.4750086 5.9498244 8.5072904 5.7605084 12.4188264 14.5241200 8.7068883 11.0866902 10.8815555 9.1347148 2.4332533 4.1540971 9.6164698 9.9170638 12.1270576 NA 3.8681830 6.8755774 10.4935436 10.8353915 6.1213035 7.7035001 6.5144111 10.4486114 12.2382752 1.4857359 12.9440488 5.8281086 7.6016876 11.7686383 11.6811755 13.0267429 9.1213040 10.7688037 10.9227243 10.6183785 10.8941968 5.3857209 8.6361881 12.0554354 11.5873159 -1.3215675 10.1095969 8.9131778 2.1377986 4.7276646 9.9221294 9.2223590 11.0002886 8.9173622 14.8045003 10.3260437 9.9056755 9.0159823 2.8878177 15.5365479 10.2343874 13.2866731 12.3548685 9.8018352 9.6923810 8.1960301 10.5342548 -0.3869400 0.3595300 1.0314000 -0.4081100 0.7372000 -0.0053992 0.0027745 0.0000000 -0.0099565 0.0133530 0.0133530 0.0024969 0.0108420 0.0108420 0.0066653 1.7892000 1.1091000 -0.0018014 -0.0018014 0.3588800 0.0087528 -0.3853700 -0.3900700 0.0127950 0.0127950 0.6965200 0.0127950 0.0127950 0.0220240 -0.3735800 -0.3869400 -0.0030475 -0.3959700 0.0068044 -0.0120240 0.0027745 -0.4090400 0.0000000 -0.0099565 -0.4032900 0.0026357 0.0000000 0.0133530 0.0133530 0.0133530 0.0047676 0.0185230 0.0108420 0.0108420 0.0104240 -0.3985300 -0.0018014 -0.0018014 -0.0018014 0.0020805 -0.0227440 -0.3853700 -0.3839200 -0.3900700 0.0127950 0.0114000 -0.4227600 0.0127950 0.4051100 0.0019418 0.0260920 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.097 9.8872045 12.0431107 5.1782047 10.2479788 3.6090930 10.9327987 4.2930688 1.3787890 8.6677548 8.8526621 2.1377986 8.1815901 4.9821403 10.2919197 10.0588215 4.5363389 9.3476885 9.8737326 10.2396484 8.6902865 10.3371811 8.1520663 10.7937293 3.8482874 9.6871393 10.0257050 4.3788029 -2.3219281 10.6423403 5.4062816 12.5788500 11.9403085 7.7816482 10.1972595 10.2041259 9.3622323 5.6383635 3.5112530 0.6783424 7.3595985 9.4564376 9.5336182 10.8769590 6.0137503 8.8974322 5.5112498 10.0959493 6.3149847 9.6245358 -0.7367252 11.9533209 3.0706813 6.4432320 9.6338578 5.7726484 5.9866999 9.4621773 9.6860887 7.4113754 2.0706641 13.7676454 1.4857359 10.2560254 NA 7.7241202 5.5238505 7.9775684 8.7724383 14.807145 5.717279 8.180198 12.975420 10.843902 10.946902 12.846367 9.978141 10.100720 11.055435 12.883352 11.084300 9.917064 9.519925 NA 7.300412 10.867876 11.383777 8.694472 8.058821 8.971257 8.528547 10.296124 8.417297 6.681175 11.560048 7.148003 6.554877 8.078173 7.237891 10.768307 10.939574 7.364861 8.631102 12.360367 7.594239 9.328963 10.430323 10.687839 10.099899 10.825565 8.267075 2.963770 9.645551 7.983282 6.956809 10.835392 5.935747 11.403514 10.448611 7.231202 13.728209 9.599830 9.947487 12.619683 10.363109 10.050681 2.678365 TCGA-AC-A3QP 79 0 NA 675 breast stage iib t2 n1mi mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 234.26.0 NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 11.0493180 7.3901629 6.2985868 11.2516529 -1.3879778 9.7355609 -1.3879778 8.5735359 10.6872309 11.0307293 8.9497080 6.6781747 7.5950799 9.4129860 6.4258671 8.7271298 9.6988857 9.4653956 7.3999888 2.0715224 10.9272357 11.2425807 9.0928763 11.2743094 8.8694739 9.7876357 5.5189757 9.6748068 NA 3.1356498 7.8974885 11.1961090 12.7460310 6.3999879 13.2917311 12.5812927 11.2502957 6.1666753 2.3125200 7.3669735 8.1914018 9.9215625 8.1277860 11.7517973 1.6120694 11.0599442 13.9501260 5.9067078 10.4366351 9.7719574 6.8504907 5.3802688 NA 14.2178986 10.4617140 2.3125200 8.2559421 -1.3879778 4.3934437 8.6007708 9.7554693 9.3761282 10.9524926 9.1129279 9.9032567 3.1356498 10.1084406 9.8688844 6.4638349 7.6646542 4.8600143 11.1873889 14.3584692 5.4316263 9.8864642 9.8829653 6.2267956 3.2559388 4.2267936 7.9541608 7.9181477 10.8606067 NA 4.3400067 7.2450811 8.9181477 10.5034901 8.6995489 5.9519351 5.4194411 10.0420158 11.6408555 2.0715224 13.6860602 6.5189773 7.1512449 12.2350530 13.0885159 11.9668864 8.0857916 10.5875759 10.5961485 10.2373383 9.9630252 4.3125272 9.8600136 11.0832532 9.5807528 1.9340258 10.4048764 9.1327048 0.1971105 3.0071417 8.3331853 10.7640539 9.5406045 8.5531335 14.9817175 9.8105311 9.3012104 7.4607090 3.4194445 14.8871011 8.1895147 13.1291329 13.0065488 8.9979483 9.7522768 6.8117587 9.5472510 3.1910e-03 3.1910e-03 3.1910e-03 -5.3992e-03 -5.3992e-03 -6.6432e-03 4.3021e-03 -3.1859e-03 -3.1859e-03 7.9374e-01 7.9374e-01 7.9762e-01 0.0000e+00 0.0000e+00 -2.6522e-05 -2.6522e-05 -2.6522e-05 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 3.6076e-03 1.2237e-02 1.2237e-02 1.2237e-02 1.8943e-02 1.8943e-02 1.8943e-02 2.4969e-03 3.1910e-03 3.1910e-03 -3.3243e-03 -5.3992e-03 -6.6432e-03 -6.6432e-03 7.5998e-04 7.5998e-04 -3.1859e-03 -3.1859e-03 -8.9224e-03 1.2934e-02 -2.8901e-03 -4.5768e-01 5.8309e-03 5.8309e-03 5.8309e-03 5.8309e-03 0.0000e+00 0.0000e+00 1.4749e-02 3.6076e-03 1.3863e-04 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 3.6076e-03 -4.4102e-01 1.2237e-02 1.2237e-02 6.3871e-03 1.8943e-02 1.8943e-02 2.4969e-03 6.7438e-03 -3.8649e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0225373 13.6280673 7.5778706 10.4928175 1.3191555 10.1400517 2.5189883 0.9340258 9.3228926 9.1666750 -1.3879778 7.1159113 2.8600093 10.3644667 9.4909034 0.9340258 7.8858818 8.4162170 9.1079410 11.6415458 9.3656287 5.9608152 10.8694739 4.9519374 9.4433932 9.9032567 7.3090534 NA 10.6801926 2.6995516 14.2569845 12.4195416 8.0571009 10.1805173 8.8940162 10.1124300 2.1970476 -1.3879778 NA 3.8600093 9.7895056 10.9868539 10.2725277 5.0383528 7.5774666 8.9317581 10.8194055 5.5546011 9.8160457 0.1971105 10.1198807 0.1971105 4.2845141 9.7232870 7.6423391 5.2267975 9.8172685 7.9474762 8.9641294 0.9340258 14.7431593 0.6121166 10.6822070 -0.3879778 8.0320463 5.8215393 7.7179944 9.0182912 12.309124 3.934016 8.649633 13.291731 10.246897 10.562277 11.751797 10.917008 9.229195 9.916437 12.718731 12.086679 7.918148 8.488603 1.419431 7.694235 9.545777 10.7941700 5.6889021 8.9215625 8.7140617 7.4322654 10.0915026 8.2138571 7.8741810 11.2743094 7.6889014 3.0044115 7.3802706 5.4464945 10.3472190 10.1468753 8.5738108 10.1454158 6.3736378 6.4886034 9.3761282 10.7857632 10.3543955 9.6399920 10.0150980 6.9340140 NA 9.7874235 6.6727817 7.2304720 10.5034901 6.0715181 10.8483993 10.0420158 6.7310271 15.2498713 10.7713267 10.6700778 12.5125756 11.2180285 9.3220316 0.1971105 TCGA-AC-A3TN 75 0 NA 34 breast stage iib t3 n0 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 2 2 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.272577e-07 3.040189e-07 10.5287621 4.3661403 6.9511040 11.7482746 -0.4152299 9.3194917 -0.4152299 7.9835261 11.1249102 13.4389201 9.5741766 6.4049610 8.3092958 9.5426098 8.4287031 8.9100877 10.8383342 8.9324035 5.9335113 0.5847701 11.9095253 11.0564574 8.4318394 11.4733352 8.7140652 9.9412341 5.4049610 9.5426098 0.1697968 3.9067078 5.9856621 9.9078369 12.3869956 6.0110461 13.7978864 13.1161027 10.0063210 5.4674262 2.1697326 6.3595686 7.7396004 7.8953947 7.0846277 12.9048070 NA 11.2170958 14.4425688 6.4239865 9.7755821 10.0841298 7.0886081 6.0846277 NA 14.8142528 10.8509831 0.5847701 7.8255732 NA 2.7547165 8.9078371 9.1744334 10.2077492 10.8051605 9.0214936 10.2642623 3.2286340 10.0052687 10.2616208 7.4674254 7.9044546 2.4916735 11.1577192 13.9385148 6.2463473 9.3194917 9.9268568 7.7063157 0.5847701 6.5904074 6.5904074 7.1659823 10.5088524 NA 5.5960108 7.2068337 8.3279334 10.4972973 2.9067175 3.9770967 3.3921388 9.0431889 11.6833078 3.2286340 13.4146040 6.7037237 7.3194915 12.5015947 12.9342016 11.9240755 9.1451149 10.8465833 10.2155044 10.1263629 10.0655723 2.2852246 9.8433483 11.2474506 8.3092958 -1.4150375 10.1772393 8.1258789 NA 2.5528689 9.0256515 9.8568287 8.9587348 8.4856490 14.8084257 9.8643928 8.1902617 9.0856241 2.7547165 17.0576277 10.3459178 11.6998258 12.2931117 9.7281654 9.7578347 6.4976714 10.6047343 0.00485790 0.73019000 0.73019000 -0.00498440 -0.00498440 -0.00802440 -0.00166290 -0.00387790 -0.00387790 -0.76877000 -0.76877000 0.00055459 0.01400100 0.01400100 0.00819590 0.00819590 0.00819590 0.00124810 0.00124810 -0.00277070 0.00797120 0.02960600 -0.76072000 0.02160300 0.01765300 0.03481800 0.03481800 0.02022900 0.03495900 0.00485790 0.00485790 -0.00512270 -0.00498440 -0.00802440 -0.00802440 -0.00166290 -0.00166290 -0.00387790 -0.00387790 -0.00387790 0.00000000 0.00000000 -0.78572000 0.00900410 0.01894300 0.01894300 0.01894300 0.01400100 0.01400100 0.00819590 0.00819590 0.00124810 0.00124810 0.00124810 -0.00277070 0.00797120 0.02010000 -0.78827000 -0.76072000 0.02160300 0.02525000 0.03481800 0.02022900 0.03495900 0.01307400 0.04854600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 7.5677759 12.9625350 4.3661403 9.9401333 1.5847701 11.2006417 1.9066982 NA 9.4879108 6.6722457 NA 5.6828148 3.4916735 9.8261695 9.6434504 1.5847701 6.8184019 7.4612994 11.4101385 11.6483458 9.7452209 6.4551464 10.4349691 2.0442192 8.5960093 10.2642623 7.6828141 -0.4152299 10.3945503 2.7547165 13.0816360 12.3108939 7.2286388 9.9467259 7.4145051 9.9733376 1.5847701 2.0442192 0.5847701 4.1083404 10.0660771 11.5158890 10.5095947 3.7942391 9.5625201 8.5791356 9.7838410 5.4427644 9.7646913 NA 11.2277364 1.3921525 4.3921388 9.5801536 6.8729555 -0.4152299 9.7140652 7.8908437 6.2782692 2.6722443 14.0727792 0.5847701 10.7798467 -0.4152299 8.0047424 5.3396683 7.1584289 8.7807694 13.7931690 5.2286379 8.5462320 13.7978864 10.1541632 10.8315228 12.9048070 12.4275254 8.9630770 9.6959178 12.4665653 9.4589951 7.1659823 10.0068470 0.5847701 8.0068467 9.7856808 10.7392838 5.4302719 8.7783075 8.6209558 7.6209558 9.8162194 6.2358343 7.7597078 11.4733352 8.2747802 1.5847701 7.0442138 5.8602552 8.3245627 9.6078435 8.9078371 9.9957635 5.7646912 2.7547165 10.2077492 10.5634926 10.5099657 8.7721344 10.1355290 6.5620623 -0.4152299 10.0571379 6.0442149 2.5847942 10.4972973 5.9684871 11.1137246 9.0431889 6.4239865 14.2112042 10.6785298 10.4578417 12.4615869 10.8922676 9.5243613 0.1697968 TCGA-AC-A3W5 65 0 NA 504 breast stage iia t2 n0 mx 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 black or african american not hispanic or latino 227.33.0 NA NA 4 1 NA NA 2 6 1 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2.530837e-06 7.509076e-07 11.0324668 6.1021542 5.7845380 11.3395862 0.7184383 9.4590742 -1.2813863 9.7594247 11.2306968 9.6026206 9.0814898 7.4800017 8.9119755 10.7491172 5.6373146 9.1941836 10.4386944 9.8223935 8.0290630 3.1778859 11.6145933 11.7971013 12.2506843 10.0170855 9.0403782 10.0732504 8.0825850 10.0638553 2.3034008 1.3034008 9.2351351 11.7409913 12.1854187 8.2062901 17.5130786 12.1110359 10.9583470 5.5764314 2.3034008 7.1489026 8.3220764 6.6010933 8.5764311 11.9648938 -1.2813863 11.2128057 11.1512530 7.3183629 9.8521832 10.1675988 8.7858843 6.0582992 -1.2813863 13.6205755 10.9890374 3.5258058 9.7716973 NA 5.5258058 9.2182961 10.4395493 9.0313332 9.8795820 9.4429640 10.4870479 1.7184383 11.3505365 10.6766403 6.2420117 6.8833569 5.3034118 8.7587399 15.1748045 7.5325196 10.3178981 10.2542115 9.3496271 1.0404015 5.1107683 7.8681972 8.2730389 10.9339831 -0.2815617 7.2920970 7.3659086 9.8112072 10.7226706 6.8783219 7.3478065 6.1107683 9.6871169 11.4582307 2.3034008 13.4240285 5.0760032 6.4733372 11.8204258 14.3297055 12.1246551 7.7324707 10.6200712 9.9887455 9.7673865 10.8012644 4.7628431 9.0771014 11.0335997 9.4049506 -1.2813863 10.5245970 8.6447461 -0.2815617 2.9724353 9.5457927 9.3748749 9.5552895 8.7682988 14.9989672 9.8522345 8.8164823 8.2634148 2.8059115 14.6381049 8.6283431 12.9084291 12.2072944 10.0015385 9.7345620 7.9472687 10.2457708 0.2656200 0.8307900 0.8437700 -0.1715700 -0.0715980 0.1345600 -0.0093966 0.3265800 -0.2908200 -0.7952700 -0.4787000 0.3976200 -0.0058357 0.0263820 -0.4302800 0.2579400 0.2579400 0.2697100 0.2264300 0.1793600 -0.0344870 -0.1209500 -0.4395000 3.6569000 -0.4330000 0.1628100 0.1628100 0.0691040 0.4397000 -0.0803230 0.2656200 -0.7279100 -0.1715700 0.1910200 0.7351200 -0.0093966 -0.0093966 0.3307700 -0.2908200 -0.2908200 0.9786900 0.2649900 -0.4839600 0.3382100 0.3382100 -0.0887640 -0.1643200 0.0263820 0.0263820 -0.4302800 -0.7541700 0.2697100 -0.4230800 -0.4230800 -0.4415600 -0.1236100 -0.0651710 -0.4606600 -0.4395000 -0.4648200 -0.7351200 0.1628100 0.0749350 -0.4578900 -0.0705370 0.3202900 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.433 -0.433 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.286 0.338 0.000 0.000 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.433 -0.433 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.286 0.338 0.000 0.000 9.9998006 14.9720945 5.4049508 10.9995108 4.6726460 11.8629490 3.8883731 1.7184383 9.2778272 9.0869565 NA 8.1283290 5.3623051 10.1473337 9.4940603 3.2420079 8.8783213 8.9781933 9.8237038 10.4518892 9.8438765 7.2022659 11.8838282 4.2246577 8.2556683 10.4870479 2.3034008 -0.2815617 11.0018279 2.4188916 11.7821822 12.6954616 8.8256670 9.7750878 9.0869565 9.8308896 6.2576085 3.2420079 NA 4.7845406 9.3891064 10.8451546 9.5795369 4.5258058 10.4644521 8.8858684 9.8295858 5.9082749 8.8412781 NA 10.4438164 4.4733388 4.3623086 9.6942982 5.7492285 6.1021542 9.9033254 8.5449984 9.5079837 2.6253406 13.5466362 1.5258183 10.6279682 NA 7.8833569 5.9181214 8.0222308 8.0176581 11.721531 7.190125 8.771018 17.513079 10.022351 11.211555 11.964894 10.317898 9.070273 10.148380 12.894078 8.738041 8.273039 8.310907 3.040384 6.660964 11.183761 11.487875 4.966380 9.006163 8.751873 7.947269 10.133738 8.108619 7.918123 10.017086 8.013071 1.718438 9.777795 7.531269 12.963557 10.782856 8.040378 9.335918 9.024512 7.322077 9.031333 10.227730 10.488701 11.109694 10.312308 7.506353 7.666818 9.748358 7.709972 7.190125 10.722671 8.226245 10.912831 9.687117 7.604146 13.587032 9.995156 9.761477 12.117060 11.979811 9.391759 2.418892 TCGA-AC-A3W6 90 0 NA 602 breast stage iiia t3 n1 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 3 white not hispanic or latino 227.33.0 NA NA 2 5 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.060464e-06 1.112456e-06 10.9216354 8.6861076 7.2394486 11.7059469 2.0655378 9.2739995 NA 9.2651935 11.4394739 10.9346524 9.4414295 7.5573741 8.7548204 10.1175458 6.2749754 9.2213515 10.6497321 9.6579783 7.9309454 3.5509499 11.9458700 11.3414129 8.3619789 10.8217439 9.3865474 10.1719534 8.5780643 9.7108193 0.3286067 1.5509499 8.6216442 11.0972913 12.4685333 7.9259876 11.9869159 11.7925908 10.2434390 6.2274080 2.6504889 7.8702975 8.3765882 9.0162230 8.1423368 12.3305502 1.5509499 11.1540445 13.7018287 6.9962588 9.8685028 9.8495016 7.7435931 3.7435904 -0.2563558 14.9132363 10.8882387 3.4440309 9.6376530 NA 4.9724124 9.6728515 9.9135182 9.0519321 11.0202992 9.3029701 10.6853744 1.7436011 10.7855944 10.7122599 7.0519321 7.5084651 2.5509499 10.1677595 15.2624614 8.7979941 10.0456608 9.6054554 8.8029376 2.3285493 2.0655378 8.0812150 8.2414450 11.9909273 0.7435581 6.5249522 7.3472192 9.4578387 10.7104591 5.1865362 6.4984807 5.3583013 9.4808405 11.7108194 3.8728780 13.9192986 5.3285565 6.7988761 12.2621234 13.6041467 12.3924001 8.4230730 10.4608411 10.0817723 10.0009810 10.9266081 3.9135213 9.1000452 11.3362838 11.3831599 -0.2563558 10.5237228 8.6231762 -1.2563558 3.7884247 9.4248316 10.6368946 9.1164583 8.4177854 14.9612669 9.9141441 8.7194412 8.9334177 5.2513896 14.4038955 8.8586369 13.1495988 12.1212104 9.6794949 10.2060954 7.8177345 10.4591648 0.14533000 0.14533000 0.14533000 -0.00193990 -0.00193990 -0.00719580 0.05736800 0.00610900 -0.00968060 0.00041593 0.00041593 0.00041593 -0.00110870 -0.00041585 0.00610900 0.00610900 0.00610900 0.00000000 0.00000000 -0.33653000 0.00152550 0.00868930 -0.31473000 -0.31473000 -0.32310000 0.01447000 0.01447000 0.01447000 0.01670500 0.14533000 0.14533000 -0.00083160 -0.00193990 -0.00719580 -0.00719580 0.05736800 0.05736800 0.00610900 -0.00968060 -0.00968060 0.05530000 0.05736800 0.00041593 0.00208050 0.00208050 0.00208050 0.00208050 -0.00041585 -0.37067000 0.00610900 -0.00219420 0.00000000 0.00000000 -0.32391000 -0.33653000 -0.00151810 0.00277450 -0.30404000 -0.31473000 -0.31473000 -0.32426000 0.01447000 0.01447000 0.01670500 0.00277450 0.02904400 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.315 -0.315 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.315 -0.315 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.2518831 14.2111350 4.9135166 10.6170373 3.6504889 11.0191357 3.7879861 NA 9.0496547 9.3683886 0.3286067 8.4150281 4.2671537 9.6323364 9.7735705 2.5509499 9.8586367 9.1740458 10.2563336 9.7329877 9.6007578 7.2233733 11.8295635 3.6015777 7.1055367 10.6853744 5.7435931 -0.2563558 11.0243639 3.5509499 12.8092617 12.3767019 8.7534217 9.4509522 9.3601419 9.4318436 4.6977905 2.2030132 1.3285493 3.2030288 8.5200262 10.2875916 10.4151343 5.6977905 8.6480019 8.2981822 9.6231764 4.3285565 9.0208805 -1.2563558 11.7713264 3.1359124 5.4984807 9.3554570 6.4740287 4.2981817 10.2764361 9.4892676 6.6564821 0.7435581 13.7782202 2.9135118 10.8264075 NA 7.5669605 6.9034649 7.7093775 8.3982294 12.750501 6.074510 8.245431 11.986916 9.848192 10.292415 12.330550 11.803951 8.817735 9.892705 12.835524 10.029573 8.241445 8.174046 1.328549 6.601575 10.968499 11.4802065 6.4300929 8.9085001 8.3210221 7.3360504 10.6588638 8.7108195 9.2817822 10.8217439 7.3172407 4.6504831 5.9819987 7.5839305 10.3063126 10.7896940 7.1823854 9.6684057 9.1667092 6.4984807 9.0519321 10.6042922 10.8264075 11.2474189 10.4331544 8.1677593 0.3286067 10.1297575 9.0566803 5.9819987 10.7104591 6.9135178 11.6412495 9.4808405 6.6802315 14.1391942 10.2157763 10.2880746 12.3285556 11.3869984 9.4448995 2.6504889 TCGA-AC-A3YI 74 0 NA 707 breast stage iiic t1c n3a mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 12 white not hispanic or latino 239.28.0 NA NA 2 5 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 4 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 8.343418e-08 11.191587078 6.767008513 6.111162802 11.183897598 -1.007811664 10.202892730 NA 9.284543051 11.665088710 11.755226262 9.792312353 6.917034267 9.022888476 10.344264834 6.523602727 8.539115762 10.111811074 10.197403715 8.556370784 3.850199342 11.939493083 11.429713452 11.693961070 10.275888552 8.903613461 10.241927514 4.992220066 10.222241864 NA 3.240146387 8.028395103 13.625727573 12.558870122 6.720141633 13.644730345 11.746482620 11.673679508 6.713320522 3.946422079 7.843970658 8.867202741 9.569650199 9.143238044 11.127610067 2.314145441 11.470232611 12.524333817 5.992222333 9.425243393 9.780124041 6.963765408 5.384540295 NA 13.665702230 10.381842058 5.014587391 9.256663956 0.992188336 4.899112777 9.644170122 10.062342339 10.075700818 11.124078392 9.688319557 10.838103471 1.577199187 10.965560072 10.760819311 6.539115374 7.126647693 8.277623564 9.890822852 15.283608005 8.565262813 10.747108911 10.840844393 7.599551379 3.314145441 4.384540295 8.531380291 8.505948871 11.937482368 0.577150837 2.577175012 7.554463762 9.460845545 10.561602420 6.562077535 6.259008785 5.182044687 9.479056512 11.733056262 -0.007811664 13.458616594 5.384540295 8.011812043 12.932626810 13.642375654 12.720354530 7.986574765 10.503479927 10.708183442 10.520763434 11.353891144 4.747108072 8.550642138 11.027364193 12.030283068 -0.007811664 10.624762289 9.501996370 1.799584701 4.742022384 8.778491147 10.815190497 9.860272251 9.272992221 15.014979351 11.026676556 9.639679860 8.384539000 3.636079338 16.215668405 9.748777694 13.480877527 13.375183137 9.059655682 9.491070623 7.696125303 9.823299085 7.6663e-02 7.6663e-02 7.6663e-02 7.8595e-04 -8.0237e-03 -1.8473e-03 -4.5978e-05 -4.6154e-03 -4.6154e-03 1.1058e+00 9.2750e-01 3.6311e-01 5.0860e-04 5.0860e-04 9.2653e-05 -6.9738e-02 -6.9738e-02 -4.6947e-03 -4.6947e-03 -3.7854e-03 9.2653e-05 1.8957e-03 1.4795e-03 1.4795e-03 1.4795e-03 9.2653e-05 9.2653e-05 9.2653e-05 3.1450e-03 7.6663e-02 7.6663e-02 1.8616e-02 7.8595e-04 -1.8473e-03 -2.8964e-03 -4.5978e-05 -4.5978e-05 -4.6154e-03 -4.6154e-03 -4.6154e-03 -3.0934e-03 -3.0934e-03 -1.7491e-01 -1.4318e-03 -1.4318e-03 -1.4318e-03 2.7850e-02 5.0860e-04 5.0860e-04 9.2653e-05 -6.9738e-02 -4.6947e-03 -4.6947e-03 1.0657e-02 -4.6154e-03 9.2653e-05 1.8957e-03 -1.6374e-01 1.4795e-03 1.4795e-03 2.3121e-03 9.2653e-05 9.2653e-05 3.1450e-03 -4.0004e-03 -1.4411e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 7.709897835 14.253618560 8.637879727 11.050551488 2.329927262 10.764123517 3.162145571 1.314174451 8.978063460 9.249609361 -0.007811664 8.134328255 3.162145571 10.111811074 10.029768413 2.451646328 9.869505629 9.724388848 12.954756010 9.375925634 9.651022083 7.177096577 11.889877860 3.314145441 8.646857478 10.838103471 6.554464529 NA 10.950049006 3.692661528 12.854761949 12.199083185 8.965201318 9.922958816 8.595847868 9.676093359 4.720141633 0.992188336 -0.007811664 2.451646328 8.673459963 9.693527903 8.848647037 6.240148295 8.944598749 7.131772608 10.389361272 5.546811136 9.424763403 -0.007811664 11.055953526 4.201673064 6.058310001 9.203988080 5.920117002 5.367259224 10.529925163 7.455745582 7.868738614 2.992224599 13.826000997 0.992188336 10.933635926 0.992188336 8.451652921 5.664647808 7.767008513 8.431013212 12.610967 5.500015 7.884005 13.644730 9.932535 10.198015 11.127610 11.650210 8.897608 10.449602 13.439434 12.365086 8.505949 8.459827 -1.007812 7.447549 10.517742 11.841626536 5.546811136 8.595847868 8.716735452 6.806003050 10.157605890 6.812400673 7.216222999 10.275888552 6.090254300 4.240146387 6.928859430 6.208093863 12.120054580 10.165273837 8.044789713 9.841626614 10.808405083 6.569650579 10.075700818 10.661106465 11.510874615 11.050551488 10.460336298 8.069037241 3.240146387 9.708886614 7.507921465 7.507921465 10.561602420 7.925912214 12.396963858 9.479056512 7.225840782 14.404195774 9.976639872 9.941318655 13.383666429 10.844360779 9.949323503 -0.007811664 TCGA-AC-A3YJ 66 0 NA 754 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2012 NA NA other specify yes 0 white not hispanic or latino 234.26.0 NA NA 2 2 NA NA 1 4 3 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.668684e-07 11.75989276 2.11143201 7.32088898 11.95186357 NA 9.34452228 -1.05859316 8.48647465 10.82606245 8.24071836 9.53303260 7.08616808 9.24186282 8.91879021 6.35090206 8.83935592 9.73998207 9.72614509 6.30783286 -0.05844292 11.65897254 10.02764659 13.03137455 11.23066470 9.26906308 10.19417572 5.38445395 10.03096075 -0.05844292 0.94148196 6.91879050 10.88951248 12.62417578 8.58356196 12.85654939 11.97665308 8.52271099 7.25892307 3.18944506 4.29906145 7.53022528 9.25325871 7.85439966 12.96924358 3.11143201 11.94993896 13.89520662 2.40094773 10.31281320 9.97768391 6.58536670 8.18468446 NA 15.29973208 10.29961203 1.74884762 7.90440642 NA 2.64193902 9.46605198 9.09379519 10.18527934 9.57086685 8.94573088 10.06563168 1.74884762 10.10075103 9.97355603 6.50375261 8.31437524 NA 10.45375697 14.22351277 7.92644129 9.82262420 9.87372509 6.88987748 -0.05844292 8.52835018 8.37613842 7.50756474 9.93868982 0.52646950 4.91879170 7.87520073 8.67791234 10.43185985 3.40094773 5.24529029 3.74886908 10.01028864 12.11627998 4.36777642 13.32082099 8.29906237 8.20829680 10.91089685 9.49033226 11.92111416 10.22112089 10.74644798 10.24014567 10.04092393 9.83557011 3.94151013 9.29906237 10.94397376 11.17901907 NA 10.83670692 8.20595302 2.94151952 2.26918280 9.06304394 10.74079191 9.36987059 8.48066905 14.95625004 10.37353022 8.30783241 8.76009251 2.40094773 15.78378700 5.51136683 11.69410006 11.13195237 10.00961675 9.05394977 7.35936303 10.50595998 -0.00816240 0.69260000 1.45430000 -0.00415460 -0.00705760 -0.00013862 0.00360760 -0.00387000 0.00000000 0.00958830 0.00958830 0.00958830 0.00152550 0.00152550 0.00287290 0.00287290 0.00287290 -0.00152430 -0.00152430 0.00110930 0.00208050 -0.00678130 0.00263570 -0.00013862 -0.00013862 0.00124810 0.00124810 0.00124810 0.00152550 -0.00816240 -0.00816240 -0.00041585 -0.00415460 -0.00277070 -0.00013862 0.00360760 -0.00229280 -0.00387000 0.00000000 0.00000000 0.00152550 0.00152550 0.00958830 -0.00180140 -0.00180140 -0.00180140 -0.00180140 0.00152550 0.00152550 -0.00058695 0.00287290 -0.00152430 -0.00152430 -0.00152430 0.00110930 0.00208050 -0.00678130 0.00499690 0.00263570 -0.00013862 0.00235810 0.00124810 0.00124810 0.00152550 0.01642500 -0.00429290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1751298 11.3604171 1.2634551 9.3423898 NA 11.1861715 NA NA 9.1436342 7.8898775 NA 4.7228704 0.9414820 10.1387271 9.4650723 0.5264695 5.9415101 8.8241533 11.4142011 10.8917017 9.9918011 5.9072945 10.7795324 3.2634401 9.8551477 10.0656317 2.8483976 2.9415195 10.7363323 3.3338244 13.3111758 12.5269424 6.8056962 9.7030616 7.9386898 9.8279690 1.2634551 3.2634401 NA 5.7743997 9.5562202 11.9441495 9.4333634 1.2634551 9.5772375 8.9721774 10.3402540 3.2634401 9.8438854 NA 11.9467840 1.5264695 9.3295275 9.5557600 6.4635816 1.2634551 9.4542508 7.8927948 7.6997335 NA 14.2991311 0.9414820 11.2916208 NA 7.6349976 5.1509617 8.4293502 10.0355880 12.44897175 5.31655126 8.57268734 12.85654939 9.95831868 11.88914728 12.96924358 12.32656381 8.47049172 9.34984006 12.42759111 11.10106638 7.50756474 12.45276882 -0.05844292 7.28580630 9.93868982 10.351962 5.007599 8.394781 8.128863 6.866323 9.838932 7.947135 6.299061 11.230665 6.350902 NA 10.444839 6.449543 7.599722 10.092527 8.376201 10.217053 7.217635 3.400948 10.185279 10.860001 10.215306 8.849903 10.128244 6.409116 NA 10.039918 8.671131 3.263440 10.431860 4.556221 11.068215 10.010289 6.376139 14.747607 10.652747 10.103272 11.783468 10.136883 8.888417 1.263455 TCGA-AC-A5XS 74 0 NA 47 breast stage iia t2 n0 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 305.23.0 NA NA 3 5 NA NA 3 3 2 2 3 2 0 0 0 0 0 0 0 7 0 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 6 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 6 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.928668e-06 3.170499e-06 10.6964093 7.5159450 6.8007834 10.8800906 -0.1060942 9.4349895 0.4788165 8.8216710 9.1118506 10.0056807 8.6587645 6.9919254 8.2180735 9.2754359 8.0960167 9.6115693 9.0296022 9.5751313 7.3326847 5.6883091 10.2711035 10.1027370 9.8201889 10.6850558 9.5503178 10.0575426 6.9653549 10.1769813 -1.1062495 3.7012496 8.2426211 10.7004426 12.1057812 6.6012523 12.6126398 12.4572084 9.9155669 5.6218145 0.8939058 6.3032839 8.1559880 10.0359999 5.8711734 12.1171405 -0.1060942 11.9473098 13.0937953 8.2404069 10.4477382 9.7909821 8.8910725 8.1082118 0.4788165 15.5204424 12.3379967 NA 8.8495427 NA 4.1033466 10.1571621 9.1700174 9.8305309 10.7707935 9.6768911 9.4301401 3.0638135 10.0442748 9.6858697 7.1033466 9.1453753 7.4900823 11.2843306 13.8872736 4.2510904 9.6479453 9.9925831 8.9853282 1.8939058 6.1700172 8.3471634 7.7917385 12.4871673 NA 2.8007860 6.8538946 9.1781387 10.7491507 6.3201579 5.9051198 3.3533233 10.2634902 11.7839672 4.7267822 13.2617172 7.0385514 7.2990340 11.0947915 11.5136544 12.2702897 9.4993724 10.7631012 10.6008206 10.3932406 9.1465582 1.7012385 9.1630196 11.1054771 9.6939840 -1.1062495 9.8480893 8.7932499 -0.1060942 3.1087921 8.4154933 11.2368009 9.3887486 9.0600560 15.0638375 9.8238910 9.2937050 8.0935655 2.2158339 14.3692147 8.2135650 12.6722781 13.0986169 9.2292834 10.1063893 6.4330512 9.9100604 0.00388540 0.60799000 0.92645000 0.01544700 0.02300500 -0.45018000 0.01223700 0.61498000 -0.36068000 0.01712400 0.01712400 0.01712400 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.00263220 -0.47986000 0.00000000 -0.04644800 -0.00221680 -0.01972600 -0.03789800 -0.03789800 -0.03789800 -0.03871400 -0.03871400 -0.03871400 0.43361000 -0.49830000 0.00388540 -0.02562600 -0.46855000 -0.46825000 -0.45018000 0.01223700 0.01223700 -0.40252000 0.11038000 -0.38470000 0.00833510 0.00833510 0.01712400 -0.00429290 -0.00429290 -0.00429290 -0.00429290 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.47986000 0.00000000 0.00000000 -0.04644800 -0.00221680 -0.01972600 -0.48995000 -0.03789800 -0.03789800 0.00958830 -0.05481200 -0.03871400 0.43361000 -0.00069303 -0.50826000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.663731 12.293304 4.385749 9.761944 4.141817 10.489617 3.981359 NA 9.043640 6.141821 NA 7.303284 3.701250 10.619259 9.568968 3.063814 9.227048 9.233743 9.307521 11.042370 9.111923 6.806783 10.860398 2.800786 7.033444 9.430140 5.043642 2.063814 10.538650 1.701239 12.928864 11.997017 7.785677 10.392742 10.716862 9.871888 4.179296 1.215803 NA 6.409593 9.287283 10.450878 10.790225 5.812755 7.195892 8.315958 10.458995 5.353323 9.692365 NA 10.174664 2.594334 2.893886 10.139232 6.161053 6.788711 10.324346 10.150102 9.531424 4.675251 13.689831 1.893906 10.450878 NA 8.846634 5.448481 7.984005 9.408607 11.2971234 7.7487611 8.0638179 12.6126398 10.4242993 11.4395814 12.1171405 11.3008951 8.7315210 9.2765169 13.4461417 10.9643493 7.7917385 9.7542041 0.4788165 7.4135289 11.4378914 10.3665837 5.7012468 9.4036680 8.5305175 7.8995176 10.2965054 7.9245602 8.8393367 10.6850558 7.2113053 -0.1060942 6.7826366 6.9858044 8.6587645 10.5476337 7.4484814 9.6175538 7.2292832 6.6286030 9.8305309 10.4975193 10.0263927 10.0550248 10.0656952 7.4291682 1.4788683 9.9009202 6.4330512 8.5214269 10.7491507 4.9813549 10.3822353 10.2634902 7.7393830 14.0559199 10.1088191 10.8455420 12.0142928 10.5030717 9.2558368 1.7012385 TCGA-AC-A62V 58 1 348 2 breast stage iv t2 n1a m1 2-10-2014 male 2013 NA NA infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 322.22.0 NA NA 1 3 NA NA 1 1 1 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.8408671 3.7347096 4.7347150 11.7755165 NA 7.6355803 NA 7.8034912 10.5107349 10.8952149 8.8819182 5.5160719 7.7459405 9.9239200 4.2893033 6.4000494 8.9417276 9.8989916 5.9441674 3.4351485 11.3182661 10.7818370 13.3932594 11.5930828 8.4194618 10.2513981 4.0566442 8.4558121 NA NA 6.6772277 9.0430522 11.8803269 6.3045694 12.6338812 13.1155800 9.8684976 5.5291275 3.1270224 6.0922645 7.8008022 6.1776567 7.2225534 12.1731152 NA 11.2509056 15.0773434 NA 10.5093313 9.9276224 7.1270307 6.2893015 2.8221795 13.8080476 9.5620558 NA 8.3475815 NA 1.3196757 7.6565543 9.1302472 9.3466600 8.0178017 8.8327451 10.0102558 -1.2653446 9.0339213 9.3848673 5.8327457 7.2265663 0.3196179 10.3350907 14.5076462 6.7018817 9.6264968 9.8882652 6.6947145 1.3196757 4.7791074 5.2104473 6.3420427 8.6355799 -0.2653446 7.2660950 7.8895313 9.6961629 10.1462241 8.2305681 3.7347096 4.5676002 8.5468906 11.4914779 6.9392842 14.1840553 5.6654496 6.5548927 10.6112301 12.9813795 11.2592548 9.6632315 11.5394492 9.7933814 9.3585947 9.2796777 1.9046190 10.1771383 10.2420122 11.0864806 -1.2653446 10.1583543 8.4437968 NA 0.3196179 7.6830802 10.0137433 9.1879837 7.6234565 15.1389400 10.1499267 8.6295308 5.5548927 3.3785671 16.1661046 5.5548927 10.9450801 10.0189589 9.5532954 9.9459932 6.0293336 9.6120587 -0.4424300 0.0158660 0.8661200 0.0020805 -0.4871800 3.6569000 0.4510500 -0.0071958 0.0000000 0.9555000 0.9555000 0.9882500 0.4463000 0.4347900 0.4412200 0.4412200 0.4412200 0.0043063 0.0043063 -0.0457700 3.4957000 0.0196430 -0.0332690 -0.4940200 3.6569000 -0.4728900 -0.5054600 -0.5054600 1.0434000 -0.4944400 -0.4424300 -0.4897400 0.0020805 -0.5253200 0.0000000 -0.0246610 -0.0015243 -0.5132100 0.0000000 -0.0465830 0.4634800 -0.0178030 0.9555000 -0.4927700 -0.4927700 -0.4927700 -0.4927700 -0.0123000 -0.0387140 0.4027700 -0.5032800 0.0043063 0.0206230 -0.0215100 -0.0457700 -0.0118320 0.0196430 -1.0774000 -0.0332690 -0.0325870 -0.3024000 -0.4757500 -0.5054600 -0.5115600 -0.0099565 0.6410300 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 8.0543851 14.4469446 6.1270307 9.6431058 0.2757223 10.9316226 -1.2653446 NA 9.3026693 8.3857649 NA 6.0834410 2.7347205 10.2464658 9.2592548 4.6173573 4.5676002 7.6081572 10.1525656 12.9487286 8.5339787 5.4626348 10.7581210 -0.2653446 9.7612366 10.0102558 0.7347421 -1.2653446 11.1596667 -0.2653446 12.4444432 12.6555312 7.3121424 10.0131626 7.6918154 10.5041378 2.1941501 0.7347421 0.7347421 0.7347421 9.7226877 12.1777862 9.4549575 3.0566355 9.2167546 11.0180910 10.1682985 4.8432352 10.6643414 NA 7.7872810 1.7346988 2.3196757 9.3232498 6.4129254 0.7347421 9.5250617 9.1745440 4.3494219 3.3196757 13.9632312 NA 11.7276515 NA 4.6889077 3.7347096 8.0339213 8.6713511 15.110798 6.056642 11.106490 12.633881 9.676494 11.044758 12.173115 11.536219 8.693266 9.087860 11.632748 9.736825 6.342043 9.157829 3.944165 11.032203 9.979077 9.6355799 5.9635319 7.7845616 8.7899956 8.1982373 8.5051129 6.5802028 4.1941422 11.5930828 8.7556931 2.3196757 8.7248170 8.1148927 8.1075780 8.2225529 4.5676002 11.9827890 3.0566355 1.7346988 9.3466600 9.7233978 10.7148527 8.8484552 9.2612123 6.3567653 -1.2653446 8.9667981 6.3567653 0.7347421 10.1462241 6.5988996 10.2104466 8.5468906 6.3640699 13.5581799 10.4190235 9.4035981 10.8287909 10.1178773 8.3803714 -1.2653446 TCGA-AC-A62X 72 0 NA 34 breast stage iia t2 n0 mx 2-10-2014 female 2013 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 305.23.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.084644e-06 3.059253e-07 11.7900095 2.6427940 5.0757636 11.0701873 NA 8.8365762 1.3208890 7.7074578 10.2866608 9.7492367 9.5139910 7.4570131 8.4467206 9.6185571 6.5751172 9.6570111 9.0465268 9.9058390 9.2347633 2.1953476 9.5798350 11.8260264 12.2323933 11.5137857 9.6857406 9.9773014 2.3208890 10.0740933 -0.2641313 1.5432484 7.0027003 11.7389048 13.3190438 2.9838418 12.4981922 11.9009780 10.1891846 7.0846426 3.9058419 6.3432444 9.7160536 6.3797700 6.6666515 6.2116469 NA 9.9263560 11.9100595 8.3652708 9.0882996 11.7267271 8.6828201 9.2045381 -1.2639580 16.0868080 9.4874580 -0.2641313 9.1994385 0.7359554 3.2594834 10.2461837 10.1093229 9.2799126 8.3923389 10.2672955 9.6525399 5.0757636 10.9641315 9.4697767 3.4908011 7.2750732 8.3761588 6.2828086 14.4244922 5.9044359 9.4882947 10.6791614 9.5311420 0.7359554 3.6428055 5.1621778 9.1798937 12.3709519 -0.2641313 0.7359554 7.1705420 11.9629282 10.9401795 4.3208745 7.6842816 3.7803101 7.8496559 11.7646834 2.0578315 13.4141840 5.3057699 5.8754655 10.7288524 13.2366937 12.2159468 8.7762037 12.4689293 10.9608201 10.6589035 9.6570111 3.9034336 9.3770626 11.7825265 7.0802099 NA 10.8945237 9.8703404 NA 3.4407795 9.2177135 11.3281374 8.5954488 8.7415384 15.4620124 9.7693370 9.9257385 7.5970007 3.1282274 11.8590654 7.4672330 11.2844951 13.1638815 10.3990273 10.5636537 7.7103284 10.6230508 0.48239000 1.47860000 1.47930000 -0.00816420 0.98390000 -0.12109000 0.09492500 1.16630000 1.90010000 0.82437000 0.82437000 0.52503000 1.06080000 1.57710000 -0.02822000 -0.00954440 -0.00954440 0.48475000 -0.04712600 -0.58520000 -0.55477000 -0.50753000 -0.51167000 0.03453400 0.03453400 0.00746030 0.00746030 -0.01123000 0.08045400 -0.47014000 0.48239000 -0.03204300 -0.04503500 0.00041411 0.50411000 -0.60129000 -0.60129000 1.16630000 1.90010000 0.85700000 -0.57861000 0.48475000 0.57898000 3.22850000 3.22850000 -0.12187000 -0.06115300 1.57710000 -0.53825000 0.01600400 -0.04486300 0.48475000 -0.04712600 -0.04712600 -0.58520000 -0.55477000 -0.52716000 -0.51167000 -0.51167000 0.03453400 -0.02176200 0.02651200 0.00746030 -0.51476000 1.91310000 0.14860000 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.555 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.128 -0.128 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 0.000 0.151 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.555 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.128 -0.128 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 0.000 0.151 4.94536892 15.12551174 2.82338253 8.96593432 0.05783147 13.52865348 -1.26395803 1.73591204 9.07909966 9.22876868 5.45015880 9.10920330 2.54327315 10.40922311 9.43375046 3.69011534 3.94536424 10.05558613 9.00854375 10.25456712 9.79179291 7.05784230 11.21594682 -0.66955633 9.16217881 9.65253991 7.21164791 NA 10.48116814 3.82337234 12.37401049 12.20644580 6.87546554 11.58551458 12.87170345 9.50327081 4.16217780 0.73595535 NA 2.32088898 9.24964159 9.77483301 7.62769803 5.07576365 11.20202364 8.15587418 9.76243752 5.89578489 11.05812387 5.63073163 12.10673762 -1.26395803 2.98384184 10.40196489 6.19878486 NA 7.43288176 5.33582622 2.73591204 7.13679327 14.12598218 NA 10.34970352 1.32088898 8.16427442 4.12822740 8.34693872 5.95508260 9.879195 8.388759 7.818063 12.498192 9.484107 10.855179 6.211647 5.915822 8.000357 10.596225 13.427221 11.433750 9.179894 6.477381 1.905851 8.245689 9.065710 11.109595 4.463832 8.826026 8.902077 8.676962 9.619772 2.905832 3.780310 11.513786 12.743905 NA 11.743467 8.014247 10.230270 9.499126 5.974318 9.688655 6.796609 3.057849 9.279913 10.082428 11.471258 10.576692 9.878659 7.925738 4.713195 10.030879 5.642806 8.807376 10.940179 9.094565 11.110138 7.849656 7.339540 13.927436 10.198927 10.380672 13.348552 11.669973 8.672552 1.735912 TCGA-AC-A62Y 79 0 NA 55 breast stage iib t2 n1 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 305.23.0 NA NA 3 4 NA NA 1 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.251513e-06 2.781139e-07 11.2861660 7.4003057 6.7151795 11.2483029 NA 10.1761531 -1.2792838 9.2226631 10.9637023 12.1594878 8.3188785 7.5600294 7.9399946 8.5958072 8.4823772 10.0073836 10.0359755 10.5128027 7.6396894 1.8907580 10.8316354 9.9253970 14.5295387 11.7927909 9.6844444 10.5038241 5.6156429 10.1056096 -1.2792838 -1.2792838 8.4385025 10.6186714 12.7863262 7.6691933 12.1396009 11.6482335 11.3921458 6.6156443 3.4212637 5.5410037 7.6126098 9.8838465 5.9969513 12.9579611 -1.2792838 11.1653231 13.5108689 7.6486042 9.6067052 10.0822214 7.9946216 7.7264505 -0.2791087 14.8108241 11.9785216 1.5281712 7.5378093 NA 3.5788059 9.8488202 10.4064507 9.7542488 10.3794836 9.6596704 9.3216679 3.1131504 10.9103416 9.8455934 8.1761532 8.4538410 2.1802434 11.4162717 13.8843183 7.0539367 9.8391181 9.8449472 7.8603775 2.6277236 6.3355351 8.0606759 8.1365677 11.5404063 0.3057955 5.7869152 7.0246067 9.0223220 9.7720348 8.7418057 6.7542488 5.1965598 10.2301061 11.7339741 3.3057955 13.8327359 7.0337093 7.2443876 11.8092829 11.0371074 12.8661212 8.5616038 9.5568762 10.3705311 10.3493216 9.7306546 4.4212637 8.7320531 11.5257636 10.6574639 NA 10.0838655 8.7080900 -0.2791087 2.1213802 8.7542488 9.8175411 9.3888243 9.3967829 15.4063412 9.2541556 9.0404980 9.2365256 2.7208257 15.7858738 9.3619745 13.3795952 12.8391181 9.7073790 9.4020643 7.6247077 9.9962928 0.08710000 0.76102000 0.76102000 -0.00650500 0.01419000 -0.39432000 0.00000000 -0.22158000 -0.22158000 -0.02201200 -0.02201200 -0.02178400 -0.42117000 -0.42298000 0.37611000 0.24191000 0.24191000 -0.00512270 -0.00152430 -0.43669000 0.38833000 -0.04115900 -0.43778000 -0.43778000 -0.43778000 0.31386000 0.31386000 0.31386000 0.71246000 0.08710000 0.08710000 0.36231000 -0.00650500 -0.39432000 -0.38089000 0.00055459 -0.00299260 -0.22158000 -0.22158000 0.00346870 0.33383000 0.32785000 -0.03791700 -0.02246900 -0.02246900 -0.02246900 -0.02246900 -0.42298000 -0.42298000 0.29093000 0.24191000 -0.00512270 -0.02492700 -0.02492700 -0.39575000 0.38833000 -0.04115900 0.30557000 -0.43778000 -0.43778000 -0.00470790 0.31386000 0.31386000 0.71246000 0.34892000 -0.46121000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 8.2868798 12.9896603 3.2443848 10.2787682 2.4212637 10.3239885 1.8907580 0.3057955 8.5281810 7.5473742 NA 7.0871477 2.9687543 10.4542649 9.5201075 2.5281712 8.3682843 9.1648054 10.4823771 9.9204983 8.9257271 7.8526831 10.6333410 4.1131420 8.4143127 9.3216679 2.7208257 NA 10.0849605 3.2443848 12.6980164 12.2903255 7.2286205 10.0062282 10.1751252 9.6604051 2.6277236 1.3057955 NA 3.0427494 8.2849754 10.0297336 9.5568762 5.4757140 7.5262152 7.1761532 8.9204982 6.5087281 8.5136163 0.7208038 11.7174759 -0.2791087 4.7208257 9.7317105 6.5410052 0.3057955 9.2365256 8.5678831 4.4212637 NA 13.5096971 -0.2791087 11.1518011 NA 8.2365256 4.3057882 7.9946216 8.8162230 12.529478 6.379037 7.880697 12.139601 9.978803 11.032290 12.957961 11.740938 9.245368 10.255615 13.679560 11.229859 8.136568 8.006228 -1.279284 6.585012 11.472579 10.3866059 7.1761532 10.3327728 8.1023689 7.3646819 10.1159744 7.2561011 9.9496446 11.7927909 6.2754150 NA 4.3057882 7.9343189 10.1653232 10.1072273 7.4890106 9.3565440 9.8208311 4.0062262 9.7542488 11.2585296 11.3142170 9.6179150 9.6757493 7.8029751 2.3057955 8.8657391 7.5378093 1.3057955 9.7720348 6.2677212 10.3221324 10.2301061 7.4622929 13.1403911 10.6822756 10.7239924 12.2745752 10.1596177 8.7963051 0.3057955 TCGA-AC-A6IV 47 0 NA 36 breast stage iib t2 n1 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 338.18.0 NA NA 2 5 NA NA 3 3 2 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1672013 9.8934907 6.9177027 11.8736873 3.4237126 10.1696676 0.1017845 9.5693908 11.0124280 11.3893052 9.7528369 7.7742105 9.2103097 9.7226160 6.9680343 9.1624812 9.2924330 9.8056887 8.5571125 5.3748030 11.1543533 10.3063564 9.2404837 11.0312902 9.2336422 10.3002303 7.2783742 10.1130124 1.5168220 1.1017845 9.8672094 11.9210329 12.9924928 9.4379197 12.8226707 12.3807186 10.5175270 6.0942509 0.8387501 8.2050728 8.9283336 9.3281974 8.1803806 12.1211443 0.8387501 10.9762543 13.7876290 5.0714109 9.7792876 10.1448124 10.9301862 5.9005263 0.1017845 14.2115119 10.5329345 3.4710183 8.3685719 -0.4831780 5.1461786 9.7894525 9.6633914 9.8716230 9.7818516 9.2146591 10.0564662 3.5612161 10.8171752 10.4966052 6.1892474 7.6716408 2.9762536 9.8967424 15.0078929 9.4981046 10.8683141 10.8760232 9.1901318 2.8387501 5.1606782 8.9272740 8.9166346 11.9010668 1.6867470 6.1388738 7.2683670 10.4044241 10.9808578 6.0942509 7.2344994 6.2717095 10.1148752 11.9236920 5.1315319 13.9398729 4.5391898 7.6640277 12.0353529 12.9538595 12.6841624 8.2932555 10.3705221 10.8194616 10.9260333 10.7582101 5.0086751 8.6716408 11.7821447 11.1710112 0.5168220 10.8194616 8.6954876 2.6867470 4.1895320 9.4146681 10.8569510 10.1218391 8.6331667 14.9114361 10.6892502 9.4304601 8.3902670 5.0714109 13.9055127 8.6627549 12.7770807 12.7593269 9.9509297 10.1808254 7.9884978 10.3205784 0.1164900 0.1164900 0.2364300 0.0034687 0.0000000 -0.0011087 0.0034687 0.0921700 -0.0026784 -0.0103700 -0.0103700 -0.0103700 -0.0158790 -0.0318490 -0.0453640 -0.1566100 -0.1566100 -0.2574500 0.0946730 0.0140510 -0.0042929 0.0024969 0.0034687 0.0034687 0.6948400 -0.0070576 -0.0070576 -0.0070576 0.0068044 -0.2503100 0.1164900 -0.0136770 0.0000000 -0.0011087 -0.0011087 0.0034687 0.0034687 0.0921700 -0.0026784 -0.0033243 -0.0217840 -0.0217840 -0.0103700 0.0013868 0.0013868 0.0013868 0.0055529 -0.0318490 -0.0318490 -0.0453640 -0.1566100 -0.2574500 0.1789000 0.1789000 0.0140510 -0.0042929 0.0024969 -0.2458200 0.0034687 0.0034687 0.0015296 -0.0070576 -0.0070576 0.0068044 -0.0022168 -0.2478800 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.469 0.223 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.469 0.223 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9747166 13.5734604 6.5829112 10.9993786 4.4576928 10.7013882 4.0086751 1.1017845 8.7847798 9.7611865 -1.4831780 9.1722102 5.7359905 9.8160307 9.5371081 5.7647495 9.8177472 9.3425765 8.5584819 9.5523092 9.6491746 7.6383563 12.5590806 3.9091394 8.5488685 10.0564662 3.7647495 2.1017845 11.8907754 3.8022242 12.6502860 11.6299137 8.8183189 10.2608156 9.8285710 9.2344992 4.6461050 2.4237126 1.1017845 5.2981817 9.1552587 9.5280499 8.7262761 7.6174851 9.2107975 7.0637176 10.3548447 5.2850063 9.8793144 0.1017845 11.8716230 3.3748030 5.3241769 9.1054997 6.4239529 5.0403840 10.4622666 10.3310046 6.9346757 1.9762536 13.4547941 2.1017845 10.6243667 -1.4831780 8.0790650 6.2650149 7.6069352 9.2998209 13.955689 5.802224 8.528050 12.822671 10.391620 9.992050 12.121144 13.696965 8.565895 10.201571 13.096963 11.228275 8.916635 8.613538 2.838750 8.012678 11.852353 11.411830 6.943088 8.604286 9.201571 8.182158 10.474643 8.547490 8.498390 11.031290 7.978302 1.516822 7.365446 7.087324 11.054526 10.830839 8.448668 9.328197 11.511176 6.522447 9.871623 10.574814 11.142760 10.888599 10.468836 8.457870 NA 9.548738 7.044300 6.086678 10.980858 7.778918 11.324918 10.114875 7.149818 13.895118 9.871623 10.137959 12.509761 10.818319 10.287899 2.217262 TCGA-AC-A6IW 73 0 NA 21 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2013 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 5 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.78740136 2.94491465 4.21793638 12.17923855 -0.05514155 9.05605564 -1.64025395 8.50588974 10.71420696 10.44576198 9.39819066 7.41523980 8.62674392 10.71475793 7.02529352 9.42671951 9.13144698 10.03679617 7.96913610 4.42605001 10.93052483 12.27639689 11.45073159 10.31560744 8.98931417 9.90588727 8.10815067 10.01414157 5.31415269 1.94493339 8.84679259 10.04558235 13.04569189 7.61262305 11.19086884 11.91754092 9.64478174 9.04645805 5.98201015 8.92601158 7.93360450 11.11588827 7.09466679 3.68188774 0.68185402 12.45411774 6.61262232 8.73391016 10.23132764 10.57912611 5.46848231 5.97466697 1.52987091 15.14618596 11.92531673 2.52987091 9.62791466 NA 2.16732581 8.31269875 9.83366336 7.27284716 10.00381373 8.99839354 10.78910273 2.60788657 9.80186434 11.66031012 3.81939229 7.39062470 1.52987091 6.21170728 14.51029986 9.04059850 10.59207865 9.70923876 10.25250034 3.60788657 NA 8.81219881 8.80497251 9.06904127 NA 2.94491465 8.18491649 9.88498888 10.12731446 2.26684650 7.51982886 6.10815014 10.63579111 11.74163568 2.44742050 13.68873766 3.11485006 7.00741642 9.98885877 13.96085774 12.12814187 6.14786022 10.92696292 10.33759526 10.47561580 10.33902545 4.08787862 9.22800839 11.54250710 8.38648118 1.52987091 10.31488082 10.26534453 3.91454539 4.85709023 8.92601158 12.31851027 9.61675595 9.13474460 14.85016602 11.27378196 9.72955498 6.75656299 8.12979560 11.22820139 3.16730975 12.27844815 11.54529760 9.48666209 9.42873577 7.29069533 10.87976825 2.86960000 1.20070000 0.28041000 -0.01572900 0.62405000 -0.30553000 -0.04089300 0.31963000 -0.01857300 1.23240000 1.23240000 0.93202000 0.18782000 -0.14824000 -0.00189610 -0.18102000 -0.17829000 0.70832000 0.00416720 -0.15529000 -0.17031000 -0.09684100 0.00374130 0.00374130 0.00374130 0.44952000 0.41747000 0.10307000 0.19583000 -0.19688000 0.23550000 -0.18232000 -0.00678650 -0.30553000 -0.15988000 -0.04089300 -0.68342000 -0.45469000 -0.01857300 0.09144000 0.18908000 -0.04170700 0.35707000 -0.22164000 -0.18811000 -0.18811000 -0.18811000 -0.17765000 -0.18761000 0.00805150 -0.18867000 0.01656000 -0.00459990 0.00041078 -0.17171000 -0.61422000 -0.10237000 -0.22215000 0.00374130 0.00374130 0.13198000 0.44952000 0.10307000 0.35138000 0.21115000 0.34664000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.417 0.417 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.000 0.115 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.000 0.000 0.756 0.756 -0.188 -0.188 0.000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.417 0.417 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.000 0.115 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.000 0.000 0.756 0.756 -0.188 -0.188 0.000 9.5116084 12.9076956 5.0603976 9.1624739 5.0742014 11.2574249 4.3372401 2.8835231 9.4159177 9.4036684 1.8193821 7.2817984 6.1543726 10.9399805 9.9373863 1.3599709 7.4125258 11.0512649 7.5815448 9.5292562 8.8729943 6.7086852 11.7914552 4.8677532 9.6049160 10.7891027 2.8193821 -1.6402540 10.9762766 4.5694121 13.5120443 11.9771954 6.4579898 9.2093627 11.0363554 10.9959024 4.4043514 2.5298709 -1.6402540 1.1672937 10.0359146 9.1239998 7.5173048 3.4043582 7.6521179 8.1785399 10.2709749 3.5694060 10.4115064 0.9449334 12.9073341 5.1801359 3.6818877 9.6291192 8.6080629 5.3024726 9.5065262 10.6688654 7.8173387 4.5097022 14.0936350 1.3599709 11.1343328 NA 9.2951226 2.0603933 7.9965820 7.0603976 11.568715 9.038558 7.581545 11.190869 9.642467 11.400419 3.681888 10.166104 8.419843 10.890537 14.276677 13.784157 8.804973 8.042952 2.752278 8.400247 9.908298 10.149491 5.325743 9.992498 9.377462 8.398877 8.904507 8.373978 6.167312 10.315607 10.584261 NA 9.110664 8.799238 13.118961 11.147044 8.397504 9.912627 6.974667 6.974667 7.272847 10.465211 11.599705 11.130415 10.133509 7.354311 NA 9.526290 5.230322 7.074204 10.127314 2.266846 10.808107 10.635791 8.015005 16.254195 10.912867 10.355725 12.030503 12.094667 8.231863 1.944933 TCGA-AC-A6IX 49 0 NA 13 breast stage iiic t2 n3a mx 2-10-2014 female 2013 NA NA infiltrating lobular carcinoma yes 19 white not hispanic or latino 334.18.0 NA NA 2 4 NA NA 3 3 2 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1537865 8.6091196 7.2203338 11.7779965 2.7923140 10.1895849 0.8663146 9.7354360 11.3224540 9.4407093 9.9145194 7.8997279 9.8986263 9.8407196 5.7538291 9.6985621 10.0698977 9.5590948 7.9041264 3.7923036 10.7004599 10.2461165 9.0931989 11.6618577 8.8424393 10.5295073 6.4023572 10.2921503 1.1293490 1.5443865 9.3026001 11.5568268 12.4071111 8.2551835 12.5117833 12.7500938 9.6858454 7.1882328 3.2448110 7.8975236 8.7477247 9.6384546 7.1810011 12.4421278 3.0679312 10.5524553 13.4686791 6.5556045 9.5205399 10.7397491 10.6394442 6.9622297 1.1293490 13.9752724 12.0095160 4.4270228 7.9215875 -1.4556135 4.6941224 9.4868913 10.2487128 9.2756960 11.0796522 10.2348114 9.6626691 2.7923140 11.1927344 10.7797928 5.1737351 8.5709004 -0.4556135 11.0686737 14.3458579 9.7427667 10.6688214 10.4197423 7.7067681 0.8663146 5.8842267 9.4070143 8.7067681 11.2733602 -1.4556135 4.6318377 7.1142327 9.9779623 10.8814412 5.2722957 6.1517066 5.0201110 10.2769683 11.9966181 5.2308793 13.1411490 4.8111627 7.4085633 11.9180577 11.9549607 12.7667945 8.6463524 10.8052964 10.2735728 10.0254296 10.4050759 4.6736582 9.3637576 11.5925231 11.8252926 -0.4556135 10.5764226 8.4662176 1.7143115 4.1347384 9.1414982 10.2016954 10.0742954 8.9345457 14.9519102 10.2761202 8.7055087 8.3452766 2.6318493 14.7753355 8.7143019 14.2787954 11.5119634 10.4000240 9.6305130 8.1066195 11.5729719 0.0000000 2.6611000 0.4826500 0.0080301 -0.0077746 -0.0101680 -0.0036276 0.0088654 -0.0149100 0.5169600 0.0221370 -0.4914300 -0.4730200 0.0197560 0.0126280 2.1854000 0.8534000 0.0081693 0.0081693 -0.0084649 0.0021928 0.0309870 0.0526400 -0.4495600 0.0546330 -0.4161000 0.0624810 0.0723690 0.0387440 -0.4391000 0.0000000 -0.0072736 -0.4835700 0.0738060 -0.0210570 -0.0036276 -0.0036276 0.0088654 -0.0149100 -0.0149100 0.0084477 -0.0066696 0.0219970 0.0203160 0.0203160 0.0203160 0.0203160 0.0197560 0.0197560 0.0126280 -0.4758300 0.0081693 0.0081693 0.0081693 -0.0084649 0.0302830 0.0309870 -0.4693100 -0.4529900 -0.4495600 -0.4736600 -0.4161000 0.0624810 0.0387440 -0.0072221 -0.4499200 -0.473 0.000 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.473 0.000 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2731478 13.4128136 7.0989658 11.0213762 3.3858451 10.7513912 2.4512771 NA 8.9986762 9.7839753 1.8663146 8.1986906 5.5778004 10.2487128 9.2159178 2.3517414 9.8099919 9.5839814 11.0246622 10.1664287 9.9951345 7.6991949 12.0407314 3.8297785 6.3645567 9.6626691 4.0038091 NA 10.9519102 3.9019288 12.0561295 11.7283223 8.4677042 9.8808834 10.5650096 9.5373153 3.4512639 1.1293490 -1.4556135 2.9366850 8.5401439 9.0211230 10.5709003 6.9955885 10.0833757 6.4452433 10.5684777 5.3387916 9.6016917 NA 11.0630300 2.3517414 4.5887686 9.5016531 6.0252880 6.0600777 9.5094397 9.2577633 10.5788319 1.1293490 13.4766839 0.8663146 10.5252305 NA 7.7017237 6.9537681 8.3581580 9.4201261 13.489469 6.588772 8.419358 12.511783 10.536253 10.854422 12.442128 10.519508 9.840593 10.535190 14.161155 9.528083 8.706768 7.829779 2.129349 7.591501 10.977962 11.308626 6.678803 9.025167 8.731729 7.188233 10.688532 7.383581 8.534481 11.661858 7.504379 2.631849 5.244815 6.764320 11.131217 10.213705 7.414742 9.178280 10.636804 7.258623 9.275696 10.687760 11.119207 10.458014 10.614162 8.282469 8.848158 9.712729 7.318669 7.417821 10.881441 7.209713 10.728815 10.276968 7.405464 13.936325 10.056623 10.055635 12.216913 10.614833 10.083536 3.451264 TCGA-AC-A6NO 43 0 NA 51 breast stage iib t2 n1a mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 338.18.0 NA NA 3 2 NA NA 1 4 3 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.7041183 6.7907160 7.2426339 11.6903750 NA 10.5954924 -1.3386152 8.9606409 11.9404631 9.5124011 9.6279384 7.8854347 7.9990546 9.8269680 8.1967083 9.6789374 10.9302674 9.5705760 6.2463948 1.4687918 11.7950569 10.2126605 12.6246000 10.9566279 8.9833610 10.1069651 5.0708229 10.4655640 -0.3386152 6.2160221 6.4362202 10.8995391 12.6742294 8.1967083 13.3597035 12.7449123 9.6955441 8.7044601 5.3052884 5.4780334 8.1928146 9.3523039 7.5802963 12.7362434 4.8902521 9.4403314 14.2836850 5.9282187 10.0070378 10.8134008 6.7275216 5.5069224 NA 13.2267005 8.1232399 2.5683240 9.3876512 0.2463473 3.8708874 10.0649777 9.5884701 10.3156215 10.5940168 10.0526766 9.5022108 2.2464081 11.0705587 10.7244909 7.4590947 8.3232111 3.1208661 11.7475692 14.5452456 8.8420385 11.1229124 10.8086379 9.0244726 1.2464081 6.3893534 9.1391911 8.2482730 10.9288049 -1.3386152 6.0451371 7.7112815 9.0687006 10.3644713 11.2489761 4.0189813 4.2761393 9.9839245 12.0967126 2.5683240 13.1500891 7.8086380 7.5317978 13.4864414 12.9430733 12.7904744 8.5194141 10.4554426 11.0126483 10.5770509 11.0104377 4.8512593 9.6236059 11.1749138 11.0073926 -1.3386152 10.3343002 8.7971424 1.8313503 5.4080155 9.0782306 11.3549199 9.9782802 9.1692275 14.7600203 10.1572879 9.3961426 9.1602821 1.6614304 15.0126138 9.9205878 12.2475690 11.2976044 9.9566279 10.1259787 7.6698616 11.3898000 1.10590000 1.56570000 1.62690000 -0.00636680 -0.01146600 -0.00387790 -0.00429290 -0.00722010 -0.00470790 0.22376000 0.22376000 0.22376000 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00691950 0.00052742 0.00527490 0.00736090 0.00736090 0.00736090 0.01223700 0.01223700 0.01223700 0.73322000 0.00285460 -0.00512270 0.00305220 -0.00636680 -0.00387790 -0.00387790 -0.00429290 -0.00429290 -0.00722010 -0.00470790 -0.00470790 1.01010000 0.49372000 0.22376000 -0.00097017 -0.00097017 -0.00097017 -0.00097017 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00263220 -0.00691950 0.00052742 0.00527490 -0.76492000 0.00736090 0.00736090 0.37680000 0.01223700 0.01223700 0.72002000 0.00527490 -0.50225000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 1.627 0.723 0.723 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.719 0.494 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 1.627 0.723 0.723 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.719 0.494 0.224 0.224 0.000 0.000 0.000 8.5116198 12.8392418 7.5653146 9.9223525 3.8313605 11.0497194 2.8313503 NA 9.3409132 7.8338603 -0.3386152 6.6755647 1.2464081 10.3718090 10.0012829 4.0537543 7.4296176 9.4550362 8.3601377 11.8487850 9.7332037 7.4816122 10.7071926 2.2464081 9.5029972 9.5022108 8.2274869 NA 10.7952174 2.2464081 13.0736058 11.9146896 7.3338584 9.7574892 6.4943228 9.6927895 2.3618806 1.6614304 0.2463473 10.2184179 9.4213211 9.7561705 10.0777027 3.9468338 8.6291059 8.3196446 10.5417818 7.0494500 9.4179892 NA 9.3088914 1.6614304 3.9093603 10.2781426 7.4725828 4.3338602 8.5698256 6.7907160 6.5743226 1.9833494 13.5541655 1.2464081 10.0819196 -1.3386152 8.6112598 4.7907147 7.4687877 8.1043765 13.484622 5.899838 9.116760 13.359704 10.277982 11.376108 12.736243 12.368792 9.021973 10.146256 13.069763 10.611624 8.248273 8.528712 3.519416 6.880601 11.431684 11.2669125 7.3444273 8.7932899 9.5022108 8.9363935 10.8899931 6.4558483 8.1712078 10.9566279 6.8263400 NA 8.5638079 7.9198579 10.9663546 10.4133954 9.1104165 9.4419727 10.8006646 4.6387110 10.3156215 10.1028210 10.7653764 10.0342980 10.7173932 8.9491453 NA 9.9915152 7.0483299 5.6156282 10.3644713 5.7382490 11.4047022 9.9839245 7.7436355 14.1166317 10.2701498 9.9543297 12.9766533 11.1822971 10.0233768 -0.3386152 TCGA-AC-A8OP 72 0 NA 53 breast stage ia t1c n0 (i-) mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 372.12.0 NA NA 1 3 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.17487408 7.62753534 6.31689333 11.91892911 1.85746352 10.20808496 2.05011855 9.61425599 11.64466441 10.55790113 10.13425059 8.00720840 9.54095737 9.56974285 4.22002807 9.12825731 10.33261586 9.63882124 8.05573090 3.90808273 12.24609382 10.04021053 13.00284778 11.70630792 9.39883474 10.04658000 6.09450000 10.07454678 1.05011855 4.85746352 8.23001563 11.88180963 12.83545684 7.52178180 13.49802919 13.63981620 9.48160410 5.69396360 1.63505783 7.44242436 8.87188060 9.34702269 7.59700072 12.82633393 2.22002033 10.28612073 14.90468277 5.07247458 9.03687308 11.05748425 8.25712097 5.83146687 -0.94981178 12.87395739 8.76726878 1.05011855 7.42514623 0.05004888 3.22003581 10.25773103 10.41205036 9.00284792 10.60085335 10.01155630 9.75660252 2.75054219 11.70496630 11.09927442 6.16904709 6.87665446 3.57366536 12.43489029 14.23075389 10.47423079 10.25651041 10.71277494 9.08765351 2.22002033 4.88299512 8.90964142 8.65001954 12.27591648 NA 4.69396081 7.91119362 9.48055919 11.13092405 6.61996169 5.57366839 4.69396081 9.27410811 12.20080581 3.80499315 13.28888444 5.31689152 7.86388767 11.98545578 12.05783466 12.84249015 8.78142562 10.14945436 9.94719566 9.88569119 10.89638047 5.02738852 8.88457747 11.11147772 10.53039190 -0.94981178 10.36071927 9.69125515 0.63505783 4.84270233 9.40325345 9.97788450 10.49718980 8.99847366 14.98188284 10.86629022 10.39938774 9.61043930 4.17939162 14.75249570 7.67946321 12.77334084 11.36582221 9.77462038 9.28132779 8.29328035 10.46939263 -0.201890 0.609660 1.126800 0.423310 -0.097162 0.000000 0.437800 -0.213150 -0.209110 -0.114720 -0.114720 0.860590 0.091272 0.100280 0.100710 0.089601 0.089601 0.089098 0.081368 0.108740 -0.056334 -0.102260 1.771100 -0.106340 3.218300 0.733180 0.058909 0.058909 0.389350 -0.513640 -0.201890 -0.021811 -0.097162 -0.196520 0.091127 0.125170 0.125170 -0.213150 -0.206000 -0.209110 0.375910 0.363650 -0.837910 -0.500400 -0.504960 0.085384 0.085384 0.100280 0.805350 0.100710 -0.507030 0.099405 0.091483 0.112400 -0.511510 -0.056334 -0.102260 -0.489020 -0.495710 0.030142 -0.493000 -0.031522 0.058909 -0.195020 -0.200150 -0.205870 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.709 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.861 -0.500 -0.500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.709 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.861 -0.500 -0.500 0.000 8.79494054 13.66061237 7.78819890 10.72164762 4.17939162 10.51209748 5.37203620 0.05004888 9.06691474 7.70474265 -0.94981178 7.59313861 3.50954384 9.70295150 10.71499818 4.85746352 9.78312184 9.62753534 11.13790084 10.21564171 10.08478169 8.03310029 11.28222763 3.37203271 9.29328058 9.75660252 4.54196081 NA 11.80687131 4.40765866 12.00611962 11.62091099 7.87982950 9.58926538 8.71010247 9.49201319 5.13756910 0.63505783 0.63505783 10.88062171 10.76306336 9.48473470 10.03238714 5.23993261 6.91608726 8.31689288 9.74097747 5.83146687 10.64349764 0.05004888 12.44389917 2.50954384 5.09450212 9.35332792 6.03537977 4.22002807 9.50953810 8.06691474 5.29803507 0.63505783 13.70418310 0.63505783 10.15993716 NA 6.37203446 6.06133339 7.63506872 8.84614601 14.5987960 5.6648156 8.3239023 13.4980292 10.4153354 10.3955118 12.8263339 13.3282656 8.7712059 10.6880899 13.1629533 11.8926533 8.6500195 8.4273170 -0.9498118 8.7083180 11.7056373 11.169372 6.998474 8.407659 8.960000 7.851006 10.639079 7.394403 8.414241 11.706308 8.247323 4.573671 3.693966 7.271791 10.616161 10.635069 8.482648 9.472171 11.474010 6.565806 9.002848 10.273505 11.937708 10.332037 10.699363 8.697565 NA 9.104290 7.267870 6.158632 11.130924 5.956998 11.481082 9.274108 7.708318 13.311026 9.522797 9.546960 12.273052 10.766497 10.896772 1.372061 TCGA-AC-A8OQ 72 0 NA 34 breast stage iib t2 n1a mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 379.6.0 NA NA 4 NA NA NA 2 5 1 6 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.85638771 8.71116310 7.16395554 12.75864513 0.08174865 9.33919441 NA 8.79433366 10.94056460 10.84086248 9.39808803 7.79948303 8.55144834 10.74714240 6.03600213 8.97359033 9.30942246 10.26792081 9.49225780 4.78224604 12.43384994 11.78159585 13.39234830 10.23409135 9.46443058 10.24796963 8.29369465 9.76743135 7.31542584 1.40375854 9.09722152 11.45276632 12.26140464 8.89398373 12.43908358 13.48548433 11.37268934 7.97054999 5.68171911 9.06337378 9.43605583 9.00513412 6.90835539 5.01254186 NA 12.55487803 7.49965936 5.43935718 10.18152910 10.02651860 9.39808803 7.18509446 2.88916200 14.73501044 10.03381969 1.08181681 8.24671353 -0.91811503 8.09582687 9.13301554 9.79948287 8.97054971 9.21494877 9.33210504 10.40542434 3.83669169 11.06480008 12.67367944 6.80972698 6.74001817 3.88916200 6.92729679 16.11787279 8.50901447 10.55348175 10.59059173 9.79605210 2.78224080 -0.91811503 8.95985737 9.01549729 9.92022258 0.08174865 4.29125728 10.17720349 10.60732735 10.17786274 5.80972569 6.57365930 6.48268536 9.89799017 11.50754695 3.83669169 12.97378004 5.75423280 7.45684557 11.87926542 12.90308225 12.49133005 8.66676902 10.65261099 10.48694802 10.25035954 10.92258448 5.38558634 8.49754810 10.92376394 9.80972698 1.40375854 13.27963752 9.07898602 2.54124223 5.06342960 9.64881180 9.49013627 10.19619957 9.42054282 15.30595897 10.91706747 9.31901655 8.51851822 3.98869377 13.66430136 6.09303403 12.45833894 12.07615996 9.86234631 9.17588408 10.45575914 10.39258404 0.2171400 1.4305000 1.0926000 -0.1611900 0.2621600 -0.0254830 0.5383700 0.5771200 0.0018030 0.0000000 0.0000000 2.2874000 1.2201000 -0.1073600 -0.1210800 -0.1245700 -0.1387100 -0.2108200 -0.1227800 0.0663720 -0.1584800 -0.0935350 -0.0440090 0.1152100 0.0709600 -0.2559900 1.2914000 -0.2796500 1.2205000 -0.3262300 0.2226800 0.2362800 -0.2828700 -0.0978910 -0.1527200 -0.3577200 -0.3366400 0.5771200 0.0018030 0.1945100 0.0780060 0.1895000 0.0069435 0.0056919 0.1917800 -0.1256900 -0.3087400 -0.1073600 -0.1551500 -0.1340600 0.4660500 0.5374900 -0.1736000 -0.1736000 0.0697010 -0.1584800 -0.1122100 -0.3211200 -0.1534900 0.1152100 -0.3226800 -0.2798900 -0.2796500 -0.0053992 -0.1330300 0.4054400 0.089 -0.128 -0.134 -0.134 -0.174 -0.174 0.000 -0.330 0.000 -0.131 -0.131 0.000 0.000 -0.281 -0.281 -0.256 -0.256 0.232 0.232 0.617 0.617 -0.134 0.218 0.000 0.000 -0.263 -0.263 -0.123 -0.123 0.164 -0.351 0.575 0.000 0.211 0.211 0.000 0.000 0.186 0.000 -0.173 0.089 -0.128 -0.134 -0.134 -0.174 -0.174 0.000 -0.330 0.000 -0.131 -0.131 0.000 0.000 -0.281 -0.281 -0.256 -0.256 0.232 0.232 0.617 0.617 -0.134 0.218 0.000 0.000 -0.263 -0.263 -0.123 -0.123 0.164 -0.351 0.575 0.000 0.211 0.211 0.000 0.000 0.186 0.000 -0.173 9.81482180 13.86919899 4.21109009 10.18115437 4.97783400 12.01124987 4.91469845 0.66675659 9.96444961 8.40373468 6.52475012 9.33137045 4.29125728 10.17324189 9.34037266 3.98869377 9.62966498 9.58463823 7.71116310 8.54737309 9.83442965 7.36720854 12.72780261 2.42521758 7.79605194 10.40542434 3.83669169 NA 10.82790094 4.03600213 12.92425508 12.16295703 8.01254409 9.66394852 9.73285816 11.46847737 3.32974074 2.88916200 0.08174865 7.05335032 9.24167790 10.12209624 6.60536839 5.52475012 9.70706780 6.87622224 9.73912492 4.93978605 10.32498056 5.08180829 12.30656190 4.43935718 5.92729679 9.94476930 6.35727927 9.94599272 9.31182686 8.79261300 11.79905451 4.80972826 13.34096129 1.40375854 10.72295512 NA 10.42388119 8.27409949 7.45684557 8.20592762 11.735970 9.829999 8.390146 12.439084 9.839197 11.268849 5.012542 11.041808 8.935116 9.935116 13.746198 11.184110 9.015497 8.061946 5.474124 7.651662 10.927689 10.948313 3.889162 8.698355 8.166615 9.298552 9.751321 7.979652 7.718431 10.234091 10.505973 7.474124 8.927296 9.482291 11.943087 10.057654 7.711163 9.548393 9.041808 10.729715 8.970550 9.893181 11.934336 12.686244 10.886744 9.012544 NA 10.197188 6.970550 10.882706 10.177863 6.740018 10.796481 9.897990 7.678406 13.917808 9.916278 10.585632 12.987664 11.345076 9.423881 5.104173 TCGA-AC-A8OR 75 0 NA 40 breast stage ia t1c n0 (i-) mx 2-10-2014 female 2013 NA NA mucinous carcinoma yes 0 white not hispanic or latino 379.6.0 NA NA 2 NA NA NA 1 4 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.97696734 0.98280196 7.01069705 11.23486478 NA 9.81805165 0.56774013 8.88516586 11.46610267 11.28600067 10.05492334 7.64100188 9.55927498 9.92823455 6.78369106 9.12106256 10.98279070 9.72594203 6.61214752 3.44222695 11.36271052 10.46811692 13.54711886 11.41193590 9.44937711 10.41272046 2.88968769 9.76415039 -1.01712504 -0.01727104 6.13253777 10.89080796 12.77385183 7.96578428 12.01638579 12.91823203 10.85431098 7.70388973 4.62664939 8.25658612 7.97147515 9.96293027 5.04888135 13.17762450 2.88968769 10.77069329 13.98349498 6.27741202 10.18449814 9.88063609 7.41741880 8.69014992 0.56774013 14.51755105 9.45039617 2.88968769 8.28885224 NA 2.56776446 9.52678912 9.95505251 9.76415039 10.44835711 8.74267895 10.30133351 0.98280196 10.95971278 10.46660653 7.68323045 7.42158267 -0.01727104 11.80237108 15.11817936 6.43828287 11.15709223 10.74890547 6.71750096 4.88968283 -1.01712504 8.68323045 8.22834348 9.31258713 -0.01727104 3.44222695 8.31146542 10.22417802 10.84504063 9.17014289 3.88967796 4.76414973 9.88817778 11.70410357 -1.01712504 13.61169187 6.73767865 7.44631496 11.09945959 9.38580266 12.59899492 8.23545615 10.89005698 10.48760975 10.52420201 11.12138251 4.91352614 9.30246277 10.86313950 12.95343590 NA 10.46559865 8.51026769 2.15270263 3.85955218 9.49947560 11.16611593 10.25133269 8.55074679 14.79707275 10.82120676 8.94713165 8.07554761 -1.01712504 15.82237589 3.93698650 13.36669746 12.73245068 10.06693478 9.29907222 7.52582224 10.43691523 -0.00013862 -0.00013862 -0.00013862 0.00600720 0.01544700 0.02132300 -0.02370900 -0.00387790 -0.88225000 0.00291330 0.00291330 0.00291330 -0.00415460 -0.00415460 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 0.01126100 -0.00609040 -0.02164700 -0.03708500 -0.03708500 -0.02794500 -0.04305900 -0.04305900 -0.04305900 -0.03163200 -0.04457700 -0.00013862 0.00000000 0.00979720 -0.03774700 0.02132300 0.00889200 0.00889200 -0.00387790 -0.88225000 -0.93378000 -0.01560400 0.00805670 0.00291330 0.00624810 0.00319100 0.00319100 -0.02134000 -0.00415460 -0.02671400 -0.01659900 -0.00567570 0.00000000 0.00000000 0.00000000 0.01126100 -0.00609040 -0.02164700 -0.02949900 -0.03708500 -0.03708500 -0.00360110 -0.04305900 -0.04305900 -0.03163200 0.00917050 -0.05792500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.88365747 11.63406669 7.81251363 10.40222429 3.13254394 10.57571489 1.30474466 NA 8.92383821 6.41741880 1.30474466 6.48263696 1.56774013 9.99261932 9.60575766 1.30474466 2.79014646 9.06759919 11.37618119 9.35238800 10.11502049 7.47063041 11.14612587 3.44222695 10.80973638 10.30133351 0.56774013 -1.01712504 10.42262155 3.23072563 13.34685696 12.60518576 6.65521585 9.45548155 7.90165374 9.64812655 1.98280196 1.30474466 -1.01712504 3.79014646 8.73934689 10.30584550 8.91204922 -1.01712504 8.90772201 8.59381537 10.49553118 7.53353765 9.51806612 NA 9.97997016 NA 9.26240121 9.19543299 7.46865988 -1.01712504 9.67278862 7.63024892 5.26819108 -0.01727104 13.93548646 NA 10.72341479 NA 9.68236313 2.68322483 7.22596510 9.63384240 13.214503 3.683225 8.550747 12.016386 10.284287 10.155218 13.177624 12.563874 8.869707 10.142031 12.080329 12.539536 8.228343 9.114648 1.982802 7.096533 11.511245 11.04348662 7.62664720 8.97147544 8.54503319 7.61578558 10.22888998 6.97714366 6.35782996 11.41193590 6.20195921 NA 10.82396187 6.73887995 12.78298284 10.21521166 8.24723352 9.96364434 10.55691112 1.98280196 9.76415039 10.49849053 10.82984805 9.65698306 10.56210664 9.24253391 NA 9.64439061 3.62664939 -0.01727104 10.84504063 7.49849023 10.72046060 9.88817778 6.65521585 14.71442715 10.09718372 9.73014454 12.60724350 10.65698297 9.31370751 NA TCGA-AN-A03X 74 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 1 2 1 NA NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4.727937e-07 1.668684e-07 11.1297923 6.3513050 6.5111755 11.1165906 NA 9.1244437 0.9362893 10.0334212 11.0779484 7.3792103 9.7890566 6.8351207 9.3300149 10.0698373 6.3847268 8.6619174 8.4519669 9.2731454 7.2581948 NA 8.7670463 10.9111595 12.5941808 11.0001114 8.6844597 10.1834033 5.0792245 9.8097111 NA NA 7.5753063 10.5914995 12.0283634 8.4676483 13.0710141 12.8496551 9.4895763 7.6133990 5.0237300 8.9343873 7.7900963 7.7649326 9.2967483 12.3323365 2.9362704 10.7198110 13.7482437 4.9058948 10.1260915 9.7022437 9.3170888 2.3513174 NA 13.4689322 9.9049338 2.6732398 7.5010513 NA 4.5212267 9.7099557 10.8143179 10.4611351 8.6086925 9.5035892 10.1432813 NA 10.6297539 9.2805629 4.6367058 8.4334536 3.0517375 9.5312136 15.1994384 7.3131597 11.4686229 10.7968367 8.7066556 NA 6.4598283 7.8148292 8.6204310 10.6487940 NA 7.2030533 6.1194890 9.1778530 11.2034438 6.9512171 5.5607577 2.5212267 9.5061227 11.3778279 5.7263435 14.3599957 5.3736726 6.7088563 12.4804265 14.5686185 12.1638829 9.1211424 10.4857308 10.5631927 9.4307894 10.6198465 6.1061913 7.8351200 11.0651206 10.6285919 NA 10.1489660 9.1666878 NA 1.9362516 9.7110540 10.1416530 9.2656896 8.6274288 14.8427818 9.1161760 9.7088564 5.9211602 NA 15.9633378 8.4831616 13.5867204 11.1465325 9.6505126 9.5728916 8.5509768 10.4473607 -0.53489000 0.76240000 0.76389000 0.00694350 0.00083195 -0.00041585 0.01265500 0.00000000 0.00000000 0.64098000 0.64098000 0.64098000 0.00124810 0.00124810 0.00221930 2.00970000 2.84000000 0.01950300 0.00298490 -0.54088000 0.01274300 0.01321300 0.02006300 0.02006300 0.02006300 -0.00567570 -0.00567570 -0.00567570 0.43948000 -0.51764000 -0.53489000 -0.01285100 0.00694350 -0.00041585 -0.00041585 0.00882440 0.00882440 0.00000000 0.00000000 0.00000000 -0.00584080 -0.03199100 0.87767000 -0.47976000 -0.47604000 -0.47604000 -0.46834000 0.00124810 0.00124810 0.00499690 -0.53774000 0.01950300 0.00298490 0.00298490 -0.54088000 0.00851360 0.01321300 -0.52256000 0.02006300 0.02006300 -0.48806000 -0.00567570 -0.00567570 0.44901000 0.48923000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 9.665321 14.967020 8.668717 10.357631 1.936252 10.363929 NA NA 8.122794 9.065550 NA 8.079225 4.874866 10.014863 8.493412 2.158660 7.686695 9.114517 11.982027 10.700586 8.435767 6.305500 10.649367 NA 8.002356 10.143281 2.351317 NA 10.370200 NA 13.354559 11.625100 8.745767 10.368809 8.627429 9.788016 5.459828 NA NA 3.743623 8.820946 9.711054 11.028584 2.810731 7.152205 8.119489 10.226286 5.905892 9.527478 2.158660 11.302225 3.995159 3.874866 9.651874 6.585403 NA 9.417394 8.139207 5.580124 NA 13.683901 NA 10.135121 NA 7.299671 2.521227 8.112856 8.106192 13.573195 3.874866 8.116176 13.071014 8.599232 10.567444 12.332337 11.435448 10.330730 10.018416 13.208314 11.529347 8.620431 8.488296 NA 6.501052 11.266437 10.617505 5.305500 8.760695 8.395699 7.119489 9.296646 5.655086 6.521230 11.000111 8.568050 4.395700 3.874866 4.088447 11.113687 9.706656 8.203053 8.203053 11.747374 3.743623 10.461135 10.335011 11.222825 10.010408 10.047403 8.218583 6.608692 7.784556 7.079224 2.351317 11.203444 9.359733 9.265690 9.506123 5.599231 13.219645 9.715439 9.267184 12.395699 10.370200 8.359733 2.521227 TCGA-AN-A03Y 66 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 5 1 3 NA NA NA 1 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 12.7703384 5.0849444 6.2155291 11.9772073 -0.4849941 9.9228873 NA 9.8884975 11.4663732 12.2441781 10.1544292 7.0386502 8.4663730 8.8097093 6.3159882 8.5388427 9.5284111 9.2310505 7.1261128 1.5151069 10.6818792 10.6193596 8.6482307 11.6242662 9.2464076 10.6015565 7.3159882 11.0498777 -0.4849941 4.5374576 7.5622127 10.0887356 12.8103552 8.1407976 12.2248185 12.9074059 7.7511028 5.1149999 1.3224474 5.3095036 8.4736412 7.0149344 7.1038029 13.4118939 1.9745293 9.5172003 14.5174860 1.6849982 10.2382674 11.9714429 6.5429947 3.2699757 1.1000357 13.1580986 11.3908378 3.4219773 8.4007847 -0.4849941 2.9074099 9.2042129 9.9068691 10.0099441 11.4266677 9.8901279 9.5059016 3.8004858 10.4671016 10.5618715 6.3854535 7.9434484 2.4219907 11.2026829 14.3408423 6.1921744 11.5250920 10.8855035 7.1038029 1.5151069 3.2699757 9.6999638 8.4561363 11.5445483 NA 5.1875144 7.4309676 10.3633203 10.0624651 6.5865516 5.4692836 4.1298023 10.2133591 12.0320196 -0.4849941 13.5631496 6.4458260 8.2980869 11.3078788 11.6038768 12.0550954 9.2276155 10.7119980 11.2809961 10.3568219 10.6642005 5.0228827 8.8998723 11.5464451 12.0737484 NA 10.2011512 10.6607023 0.8370552 4.3979740 9.8582742 11.5381498 10.9665572 8.7172124 14.7862779 10.4231058 10.8429218 9.0199076 7.3605785 16.0539670 9.1214936 11.9718279 11.0564272 10.6884533 8.8879535 8.5122680 10.8639301 0.4101400 1.2668000 2.7559000 0.3805800 0.3805800 -0.0751920 0.9196900 0.4146500 0.3675800 -0.5317300 3.6569000 3.4368000 -0.0416050 -0.0416050 -0.0539970 3.6569000 3.6569000 0.3898400 0.3898400 0.3949800 -0.0395100 -0.0031662 0.0050167 0.0050167 -0.0146400 0.4473400 0.4473400 0.4424600 0.4708600 -0.4683200 -0.5322400 -0.4853200 0.3805800 -0.0751920 -0.1008600 0.8120900 0.8302200 0.4146500 0.3490600 0.3675800 -0.0583080 -0.0753260 -0.5531100 -0.5512800 -0.5512800 -0.5157700 -0.5157700 -0.0416050 0.0000000 -0.0539970 -0.5464700 0.3898400 0.3898400 0.3898400 0.3624000 -0.0395100 -0.0031662 -0.4870000 0.0050167 0.0050167 0.3755200 0.4473400 0.4473400 0.4708600 0.3699500 -0.0411350 0.000 0.000 0.000 -0.480 0.390 0.390 0.362 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 -0.481 0.627 -0.516 -0.516 0.159 0.000 0.000 0.000 -0.480 0.390 0.390 0.362 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 -0.481 0.627 -0.516 -0.516 0.159 8.5932395 11.7573695 7.4309676 9.8971720 3.9060343 11.1967662 1.5151069 NA 9.3637114 8.6584718 0.5151069 6.9202302 2.3224474 10.0995814 9.9806549 1.5151069 7.2964482 9.0619830 9.2033387 10.2081398 8.9767726 7.5892302 10.1853021 1.3224474 9.8085601 9.5059016 0.1000357 NA 10.8120047 2.3224474 13.0040583 12.0508499 7.0887352 10.1052077 8.4721904 10.1122100 4.4458260 1.9745293 -1.4847922 8.7853838 9.5778093 9.6346782 8.4007847 3.2699757 8.9781427 6.6648355 10.5767972 5.1589429 9.1777569 -0.4849941 10.4601665 2.9074099 3.3730635 9.7925387 5.7268803 3.9074099 9.1857447 8.1607468 6.2832736 NA 14.9009678 -1.4847922 10.2906988 NA 7.0696775 4.9580306 8.2749768 7.3637116 15.579519 5.613122 7.692508 12.224819 10.292960 11.908881 13.411894 11.308895 13.545989 10.736676 12.600644 12.640663 8.456136 10.932941 NA 6.809709 10.910890 10.415201 8.314370 8.079238 9.613779 8.994869 9.358711 7.069677 5.054249 11.624266 5.581176 7.607846 7.984731 8.050150 8.973495 8.736676 9.567656 8.879223 11.843202 5.966299 10.009944 10.141710 11.292344 9.839832 10.323248 7.928716 1.100036 8.871562 6.092518 5.613122 10.062465 5.445826 10.315179 10.213359 7.357439 14.035216 10.212491 9.826837 13.197699 11.252758 9.446565 1.322447 TCGA-AN-A041 29 0 NA 7 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 56.63.0 3 1 1 NA 2 2 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 11.445108297 5.316167469 7.322167923 11.710631509 -0.005782353 10.406104747 1.409255147 9.920536717 12.076057014 8.718754443 9.955208024 7.538561443 9.333348368 9.649473194 6.618732001 9.609563836 10.167501443 10.524321915 7.453672310 0.731183242 10.756899610 9.667844238 15.145376222 9.694680520 8.851184969 11.301631313 4.618732001 10.958340863 -0.005782353 0.994217647 8.123523943 12.866851487 12.378035017 8.197180810 14.154164612 12.928668762 7.982925145 5.860488606 3.164158743 6.130376989 8.751352914 11.347019862 8.728950389 12.988829890 2.109728291 10.444764681 13.565005645 0.731183242 9.002669333 11.331676781 8.670197700 8.898122475 1.409255147 13.564470809 9.120084656 2.868706517 8.345916143 -0.005782353 5.328139932 10.055386837 10.088318392 9.271915608 10.142717329 9.557119213 9.562196814 2.109728291 11.693090075 10.440634788 5.685401980 8.014757535 2.316174712 11.208964606 15.257534388 8.343839056 11.365109732 11.221856665 10.253199249 0.731183242 7.584204135 7.870757400 9.477384696 10.438220274 -0.005782353 7.357645249 7.594153635 9.689469003 11.343153285 5.818669088 4.801593262 4.363472483 11.035899887 11.816545990 3.579204289 14.218820294 5.464560453 8.294974487 12.611478589 13.269977256 13.197792658 8.721026710 10.865119106 11.212198453 11.192896524 11.284451611 5.190638563 8.552661413 12.435888133 8.816545950 NA 10.295736912 10.739634983 1.409255147 3.063485685 9.530164014 10.879174352 11.098621085 8.826075880 14.859909572 10.832919437 9.919547908 8.420505561 1.731226696 16.178586638 8.474021038 12.177979470 10.561563091 9.897620566 9.736269326 8.543704663 10.851324914 -0.296690 0.609240 0.713670 -0.201310 0.264110 -0.268480 -0.308630 0.201280 -0.656920 -0.427630 -0.427630 1.395100 0.031657 0.031657 -0.288200 -0.069408 -0.679080 0.029997 0.059570 0.848190 0.056859 -0.024466 -0.682460 0.887340 0.958660 -0.354940 -0.198070 -0.198070 0.108830 -0.324560 -0.296690 0.011739 -0.201310 -0.288630 -0.249890 -0.289310 -0.281630 0.201280 -0.656920 -0.656920 0.058000 0.058000 -0.029389 -0.298560 -0.292910 -0.324230 -0.313020 0.031657 0.045910 -0.320100 -0.679080 0.059570 0.059570 0.059570 0.848190 0.056859 -0.069007 -0.282700 -0.682460 0.958660 -0.448410 -0.329080 -0.198070 0.505330 0.041377 -0.695910 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.268 -0.268 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 -0.168 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.268 -0.268 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 -0.168 8.6089504 14.2911330 6.2980222 10.2097737 3.2166256 11.2045062 1.7312267 -0.5907449 8.5792032 7.9867073 NA 8.3031108 0.4092551 10.6245079 9.2796428 2.4967435 7.5741848 10.0922729 6.2796422 9.7368310 10.1686879 8.8165460 12.0012680 3.0531287 9.4260865 9.5621968 2.2166411 4.9791336 11.6622393 0.7311832 11.8121570 12.2045062 8.7745071 9.8202596 7.7491279 9.2318490 5.3865592 1.9942539 0.4092551 6.5437047 8.4134989 9.3612913 9.5647289 4.1097199 8.1468298 6.0091904 9.7491283 6.1439872 10.4519636 NA 10.1951394 2.6572055 5.1097199 9.5088759 5.4498420 3.6572055 9.3605629 8.1939131 5.4536723 -0.5907449 13.3405698 0.4092551 10.7452268 NA 7.7864885 5.5488281 7.7107748 9.2719156 13.148079 5.852221 8.479399 14.154165 11.087399 10.129950 12.988830 13.740790 8.176651 11.323663 12.826537 10.425042 9.477385 9.063914 NA 8.237415 12.857395 10.9696111 6.5488296 8.8101577 9.4399453 9.7441101 10.4878794 5.9406601 10.2429590 9.6946805 6.6807407 3.6946796 8.0184567 7.7785266 11.5035209 9.8542931 7.6643065 9.0513300 11.6350882 5.1641668 9.2719156 10.9096222 11.6744537 9.8589428 10.4550379 9.2942118 NA 9.8664129 7.5487271 5.4753670 11.3431533 8.1422934 10.2210543 11.0358999 7.4260869 13.3504634 9.7107744 9.6338829 12.2126021 10.0781632 9.9051332 -0.5907449 TCGA-AN-A046 68 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 5 2 2 NA NA NA 1 3 3 1 NA NA 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 4 0 0 7 0 5 4 7 0 7 0 0 0 5 4 0 1 4 0 4 0 4 0 0 4 0 0 0 0 0 4 7 7 0 0 0 0 1 0 0 0 0 0 0 7 0 0 7 7 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 5 0 0 4 0 4 7 0 0 7 0 0 5 4 0 0 4 0 7 4 0 4 0 0 4 0 0 7 0 0 0 7 0 0 0 7 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 4 0 4 4 0 4 0 0 0 0 0 0 4 0 1 0 0 4 0 0 0 0 7 0 7 0 0 0 0 5 7 0 0 4 4 7 0 0 7 0 0 0 5 4 0 0 7 4 0 0 1 0 4 0 7 4 0 0 4 0 0 0 0 0 4 4 0 0 0 0 0 4 0 0 0.0001178091 2.39178e-05 11.3998156 5.9564679 6.5237282 11.3575554 -0.4010632 10.5425294 -0.4010632 9.6969477 11.8576289 10.4420516 9.9836995 7.6157238 9.0867556 9.4929756 4.8468443 9.3521324 10.7464387 9.7230370 7.1458099 5.3538032 11.0982633 9.7486628 13.0174272 10.3666863 9.4420517 10.4685095 7.4692804 9.7763353 0.5989368 0.1838358 8.4126969 9.9504072 12.1843477 6.9163285 12.9089604 13.6526295 10.0992597 6.9298324 4.8657011 5.4692804 8.0397849 8.4830862 7.4506644 13.1015611 2.1838676 10.1678218 13.3129465 2.4062645 9.4110929 11.1580538 7.8843177 8.7087463 -1.4012537 14.8328972 10.4444058 0.1838358 7.2606938 -0.4010632 4.1535054 9.8732938 9.6890281 9.5428957 10.2053209 9.7763353 10.0345859 0.5989368 11.3261980 10.2646957 7.4158989 7.7613072 2.6863885 11.9522004 15.1631247 7.3514305 9.7178568 10.1126433 8.4553412 3.1224739 4.4815573 8.0786958 8.3917059 10.0578349 NA 5.4062713 7.0293678 9.2731079 10.8920999 7.4967611 6.9782940 5.4444053 9.6350894 12.2956659 1.7688407 13.6337576 6.1913731 7.5266933 12.2496309 13.4717829 12.9943829 7.4631017 10.7252975 10.9183056 10.3438673 11.1368621 4.5761956 8.5326065 13.1794687 10.8068451 0.5989368 10.6636584 8.9782940 1.7688407 3.8087557 10.1121498 10.4773499 9.9772105 8.8456563 15.4248434 10.5370250 9.9723246 9.0927711 2.0583511 15.7961228 9.1429142 12.4562164 11.6665181 10.1390438 8.9531651 7.4906993 10.1755701 -0.1966300 -0.1966300 0.3752700 0.0027051 0.0027051 -0.1632600 0.0137020 0.0102810 0.0025663 0.0018723 0.0018723 -0.0018543 0.0092521 0.0000000 0.0025663 0.0025663 0.0025663 -0.0017321 -0.0017321 -0.1270000 0.0038159 0.0152380 -0.5272100 -0.2406400 -0.2406400 0.0333380 0.0333380 0.0333380 0.0212530 -0.2265600 -0.1966300 -0.0293790 0.0027051 -0.1632600 -0.1632600 -0.0027617 -0.0027617 0.0110510 0.0025663 0.0025663 0.0038159 0.0127250 0.0018723 -0.0171250 -0.0171250 -0.0140220 -0.0140220 0.0000000 0.0000000 0.0025663 0.0025663 -0.0017321 0.0146790 0.0146790 -0.1275900 0.0038159 0.0152380 -0.5235300 -0.5272100 -0.2406400 0.0031216 0.0333380 0.0333380 0.0092401 -0.0691310 0.0343250 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4022395 13.2389346 4.5531147 9.6837242 3.5058020 11.5879553 2.0583511 -0.4010632 8.2941442 7.6916730 NA 7.2461943 3.5531147 10.4246696 9.3445900 2.4062645 8.4286386 8.8083690 7.9564679 9.8946847 10.4235563 7.6157238 10.4518353 1.6778465 9.5177790 10.0345859 6.0746489 NA 10.5614503 2.5058147 13.6785255 12.3810949 7.8866282 9.5589177 9.2418700 9.6508044 1.7688407 1.4062645 0.1838358 2.5989130 8.2783960 10.6750632 8.4412660 3.4062645 9.2232451 5.7688407 9.8633584 7.3769927 9.2291829 NA 13.3529159 1.4062645 5.2136272 10.0097803 7.4724520 2.9912270 9.0786960 8.3654445 6.9432111 1.5989368 14.6106889 1.1838993 10.5340808 NA 7.9630504 4.7688407 7.7688407 9.4262585 12.6067787 4.1224739 8.9095286 12.9089604 10.2924026 11.3880417 13.1015611 11.8120199 8.9997951 10.5340808 13.6631532 11.4931651 8.3917059 8.3900787 -0.4010632 7.3302348 11.0985125 11.471783 8.141948 9.145810 9.146774 7.920843 10.789929 7.888934 8.375349 10.366686 5.058347 2.299362 4.973956 7.138191 10.797054 11.151104 7.978294 9.705479 11.239838 6.558918 9.542896 10.974770 10.961955 9.508059 10.614331 9.072621 5.469280 9.470983 7.536113 5.367098 10.892100 6.832536 11.514422 9.635089 7.861011 14.593490 10.086756 10.467738 12.572523 10.708420 9.438907 1.768841 TCGA-AN-A049 62 0 NA 19 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 3 1 1 NA 2 2 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 10.9184477 6.7684609 7.0960362 11.7884774 1.7741229 10.5729849 NA 10.2045606 11.3927231 10.6030379 9.9021025 6.7797325 9.2304627 9.3477553 5.7741071 8.7881287 9.7874308 9.2749500 7.2819031 4.4745464 10.2340519 9.6544570 12.7221103 10.6613287 8.9238551 10.4421067 5.3286965 11.5640493 -1.2260037 -1.2260037 8.3740209 11.7050302 12.8331145 7.1316605 13.9080129 12.3408757 9.0005203 4.7048443 1.3590713 5.7853361 8.4553465 9.8708233 7.4323197 12.9317709 2.5814718 10.8164516 13.6112926 3.7283015 10.0909553 11.0068289 8.4952075 7.5910914 NA 14.7390980 10.0190665 0.7740807 7.1491476 -1.2260037 2.9440338 10.0807395 10.6394548 10.8263365 9.8642205 9.7684616 9.6344192 -1.2260037 10.3425393 10.2386538 6.7341107 8.9314550 1.0960594 11.5491010 14.9104184 8.0553893 11.6630416 11.0770326 7.8642208 0.7740807 3.0220304 8.6101586 10.0727436 11.1344066 -1.2260037 6.0408946 7.5223006 9.6242950 11.5816643 5.1664262 5.9339786 5.0595110 10.4771466 11.5978734 NA 13.2405670 6.4251605 7.8668653 12.2332836 12.6656071 12.9206768 8.5701479 10.8622339 10.8361543 10.2260970 10.6944610 4.9639318 8.9377578 13.4193725 8.3665653 -1.2260037 10.5377355 9.3515369 0.3590713 2.5711186 8.9314550 10.9932767 10.3562501 9.0148995 14.5880396 10.4170624 10.5591518 9.8020142 2.2335507 15.4966889 6.8930491 12.3035387 11.1036242 9.6742202 10.3185897 8.2191230 10.2351731 0.0107030 0.0000000 0.0352420 0.6470800 1.3340000 -0.7115900 -0.0270630 -0.0152630 -0.0152630 -0.6851500 -0.6851500 1.2985000 -0.6908500 0.0178240 0.0085380 0.6732600 0.6732600 0.0165650 -0.0108820 0.0296060 0.0171240 -0.6797600 0.0562280 1.9978000 0.7040100 0.0338310 0.0338310 0.0228170 0.0384890 -0.5613700 0.0000000 -0.6867000 -0.7013300 -0.0131270 -0.7172200 -0.0237030 -0.0237030 -0.0152630 -0.0152630 0.0047190 0.6490500 -0.7005500 -0.6851500 -0.6038100 -0.6038100 0.0249690 -0.6511800 0.0178240 0.0178240 0.0085380 -0.6870600 -0.6076700 -0.0108820 0.0298880 -0.0008316 0.0171240 0.0552300 -0.6541700 0.0562280 0.0125160 0.0705300 0.0338310 0.0228170 0.0384890 -0.1316000 -0.6338700 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 8.3979894 13.9224655 6.0778881 10.1426146 3.3888232 10.6375201 2.8615783 NA 7.7107458 8.1642769 -0.2258349 7.8535928 2.7741018 11.1483326 9.2076935 1.0960594 8.6974357 9.1338576 10.5447721 10.7867327 9.7832229 7.5814627 10.9371288 2.4745399 7.1664252 9.6344192 2.5814718 NA 11.0505234 1.3590713 12.1111725 12.3009741 7.9339798 10.2129000 12.0027766 9.5587429 3.2335353 1.5814477 NA 2.0960257 9.2528778 10.3472820 9.7434946 5.2659619 8.7610878 7.5750082 9.5636417 6.0220348 9.8401973 NA 10.9248075 1.9440338 3.7741123 8.8073659 5.7625667 3.9440338 10.6711973 8.3851329 6.6506253 1.9440338 13.7598167 -1.2260037 10.3758789 NA 7.8130269 4.7283069 7.6258571 8.8239566 13.4949717 5.7741071 7.5620104 13.9080129 10.3739420 10.9750067 12.9317709 12.0288415 9.8609079 11.1696423 12.8759197 10.8638896 10.0727436 8.7726986 0.3590713 8.0869912 10.7930038 10.496916 6.625858 8.548895 8.670441 8.988427 10.343356 7.036203 8.233540 10.661329 6.439444 1.359071 6.050232 7.488731 10.493925 9.532331 8.587889 9.551363 13.116808 4.882633 10.826337 10.465852 11.958983 9.455347 10.255403 8.691480 NA 9.088725 10.260546 5.233539 11.581664 6.861571 10.513467 10.477147 7.644473 13.682923 10.203515 9.747088 13.008102 10.125600 9.635971 1.944034 TCGA-AN-A04A 36 0 NA 90 breast stage iiia t2 n2 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 56.63.0 3 2 1 NA 2 4 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.946798e-07 12.88834995 6.43437136 6.72917750 11.71271726 0.07093882 9.95462804 -0.51395501 9.87778458 11.63559239 8.64208708 9.58403610 7.01738525 9.13256271 10.78664259 4.96173907 8.27063873 9.75220500 10.48635619 7.24755540 2.48599349 8.65467612 10.80482920 14.51228970 10.19250008 8.99577902 11.41322643 4.12985998 10.08032869 0.07093882 0.07093882 7.95767900 11.83652890 12.63034360 8.28204358 11.92479588 12.57023109 9.46328404 5.72440744 1.29337048 6.98982930 8.41969478 7.30937085 8.41230012 12.70123365 2.07097316 10.18947508 13.60693035 3.34399047 9.13166253 10.80369928 6.75279006 8.44310600 2.29337048 14.00898576 10.51385479 2.18643717 7.04442472 2.48599349 4.46328241 9.28204358 10.44201705 9.68751531 10.98560083 9.73689453 9.70819517 2.65592421 11.21264794 9.87186644 4.82585176 7.78521181 10.56582210 11.04920028 15.80110935 6.90478393 11.06814599 10.91750165 8.02516282 2.29337048 4.24089434 9.15488898 9.13076154 10.66030553 NA 7.30937085 7.69301853 9.62171326 11.42888502 10.03771222 4.61528681 4.87832317 10.22536279 12.08765875 3.12985998 14.28829318 4.46328241 7.26079066 12.06201591 13.42103092 12.75381483 7.80341692 9.39364572 10.87912632 10.36597013 10.91697920 3.80793188 9.01445824 11.79718467 11.88434691 NA 10.51494607 8.78406649 -0.51395501 1.29542917 9.69484799 11.12172213 10.05491019 9.25253298 15.27486252 9.94850624 9.56148309 6.43437136 1.07093882 16.30175630 7.35019046 12.19260795 11.27145649 9.59322116 10.13031096 8.38384942 10.22886918 -0.4089300 0.4042700 0.4042700 0.0102200 0.0273570 0.0098669 0.0175440 0.9462900 -0.4155300 -0.4386400 -0.4386400 1.3871000 -0.0243730 -0.0267960 -0.4200300 -0.4200300 -0.4200300 -0.4402700 0.0038854 -0.0313590 0.4267100 3.1996000 -0.4691800 -0.4691800 1.7500000 -0.4342000 -0.0635690 -0.0635690 0.4112900 -0.4658900 -0.4089300 -0.0364010 0.0102200 -0.4498600 0.0098669 0.0175440 0.0175440 -0.8791400 -0.4155300 -0.0395290 0.0139470 -0.0131270 -0.8988600 -0.4335500 -0.4335500 -0.4126700 0.3320500 -0.0267960 -0.0494100 -0.4200300 -0.4200300 -0.4402700 0.0038854 0.0038854 -0.4178400 0.3896500 -0.4159700 0.4248600 -0.4691800 -0.4691800 -0.4791300 -0.0183530 -0.0635690 0.7912300 -0.3980800 0.0657990 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 -0.402 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 0.000 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 -0.402 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 0.000 8.83251790 14.57835031 9.69910825 9.93412030 2.07097316 10.05823057 -0.51395501 1.65594710 8.09518284 9.13974472 NA 9.88367870 0.80793188 10.61721793 8.60624196 1.48599349 7.09333410 9.89220901 10.14421555 9.33462704 9.00991873 7.15488898 11.59811770 2.07097316 8.07096672 9.70819517 3.91226663 NA 11.60640392 1.07093882 12.82104538 12.12172213 8.62043026 9.53857211 8.01348124 9.66342361 4.55209421 1.48599349 -1.51416103 0.07093882 8.18470875 9.02030689 9.61721784 3.65592421 7.16977070 6.17949115 10.01005599 9.02225128 9.40188342 -0.51395501 9.70274982 2.87831336 7.58929160 9.32897510 6.91837908 4.29335577 9.77832572 7.48318375 8.96275028 2.39289439 14.26420951 -1.51416103 11.34028803 NA 8.07846093 5.04059439 8.77487006 8.52492286 13.148617 5.903855 8.410816 11.924796 10.075655 10.645875 12.701234 14.610751 8.711211 10.623594 13.228156 11.596487 9.130762 9.014458 -0.513955 7.916456 11.093103 11.622194 7.702750 8.597140 9.727987 7.729178 10.966582 5.852326 9.768513 10.192500 5.920632 3.530395 7.179491 6.785670 12.034344 10.099333 9.312235 9.116271 10.614643 4.343983 9.687515 10.994542 10.771984 9.769092 11.027827 9.647136 -1.514161 9.098725 7.690330 5.714822 11.428885 7.933087 10.790355 10.225363 7.104389 14.279430 10.101174 9.932570 12.580659 10.202823 9.493732 1.807932 TCGA-AN-A04C 51 0 NA 54 breast stage iib t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 56.63.0 6 3 4 NA NA NA 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 1.283541e-06 4.85664e-07 11.1596441 4.5269264 9.4974990 13.7275819 NA 9.9742025 NA 9.0369165 11.8753843 6.8796004 9.3849096 7.7713475 7.9598878 11.1231756 6.8354770 9.2776998 10.1343725 10.1389180 7.1980472 3.4587626 10.7965947 11.1701187 14.0963752 9.3555288 9.5605209 10.8971464 5.1192690 10.3147185 -0.4955321 3.2050014 7.5434796 10.0577099 12.7355568 5.9308248 17.2909835 12.8525280 8.2989767 4.6943844 2.0895320 7.6286817 9.5421077 3.2050014 6.1044730 12.3988100 NA 10.1650023 11.1272988 6.4761046 9.3263347 11.4552988 9.3183419 7.3054608 2.4114534 11.7910058 8.0572298 1.3119099 8.6235018 NA 4.3374542 9.2957235 10.2502349 9.2426530 10.9378853 9.9203024 9.9562870 1.3119099 10.7366817 10.6754246 3.9308225 5.8708825 12.5756878 11.8267705 14.7114987 6.0996319 10.1058671 9.5414211 7.9557719 1.0894982 3.8968821 7.4411988 8.4861279 12.3780048 -1.4953288 5.5706511 6.2324804 8.7405748 11.1088822 3.6338380 6.6338438 4.6338438 10.2656963 12.1470637 3.3625400 13.0787994 4.6338438 7.3151323 11.5378116 13.6735461 12.8907600 6.3311086 10.9107656 11.2671503 9.9838357 10.6841588 2.3119099 9.4507360 11.9354052 10.0810450 1.3119099 10.2110566 10.0232138 -1.4953288 4.2408943 9.7905407 11.3885403 9.7742718 8.6619078 14.8990568 10.8103375 10.2735720 7.8332355 1.5045695 14.8363174 10.8146054 12.9008309 11.3010059 10.0044066 10.0876434 7.8060566 9.5060463 -0.149650 0.417310 0.417310 -0.120950 -0.151950 0.242640 0.976470 0.259340 1.711000 -0.673250 -0.589020 3.656900 0.192540 0.192540 0.260750 0.260750 0.260750 0.224990 -0.519590 1.757000 -0.278940 0.036935 -0.571490 3.656900 0.297240 0.076279 0.076279 0.418140 0.251050 -0.149650 -0.149650 0.219510 -0.560670 -0.988990 0.243110 0.213300 -0.576340 0.259340 -0.194870 -1.029500 -0.136260 -0.136260 -1.021900 0.241090 -0.136780 -0.136780 -0.125210 0.192540 0.192540 -0.154520 -0.154390 0.224990 -0.519590 -0.519590 -0.233980 -0.278940 0.036935 -0.489840 -0.561960 2.021100 0.227000 -0.302630 0.436650 0.228230 -0.135490 -0.017693 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 7.3718394 11.6060440 2.5045695 7.6744854 3.0707671 11.4795129 2.2049858 3.0281271 8.9360584 6.5157881 NA 6.7429655 5.2050014 11.1949952 9.4241688 5.3247386 8.0475924 9.7291653 9.4204401 11.8297255 7.9892423 6.6183033 10.7663618 NA 7.9903899 9.9562870 3.2050014 NA 11.8134685 NA 13.6337632 12.6403501 7.0320380 8.3054608 7.9011656 11.8150314 2.7524917 3.5489544 NA 0.8265180 9.2752245 10.2540111 10.5192786 3.7899587 9.6678519 7.3215439 9.9792806 8.0300817 10.1654480 -1.4953288 11.1009834 1.5045695 4.2324842 9.9070664 6.4529281 5.5920234 9.2669427 8.0763132 9.0658485 3.2594533 14.7605666 -0.4955321 10.8574317 2.5920144 10.2904218 6.3054599 8.5045608 8.0437196 12.110336 7.992401 9.676988 17.290983 9.946467 10.854671 12.398810 9.482556 9.238423 10.628682 12.983393 11.073942 8.486128 5.374925 4.613084 8.342188 11.858121 11.081517 6.441198 8.394825 9.447808 10.398620 10.291908 5.654307 5.905440 9.355529 6.211919 -1.495329 10.125697 8.033269 12.873613 11.134828 6.537984 9.595996 7.478975 5.337451 9.242653 10.266112 9.323143 9.076313 10.452563 8.122946 1.089498 9.122873 6.487554 7.051455 11.108882 4.771347 11.434928 10.265696 8.229603 14.863641 10.392162 10.188433 11.805771 11.688661 9.435298 1.674506 TCGA-AN-A04D 58 0 NA 52 breast stage iib t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.116108e-06 7.284961e-07 11.9508567 2.3737317 8.2344846 11.4169218 -1.7963603 9.3706083 2.1106973 9.3240554 11.1846712 6.5657617 9.7293385 8.1315957 9.1426621 9.1046844 8.6866255 7.9570341 9.0749528 10.1857416 9.0795669 0.7887692 9.9536871 10.5649389 12.4827026 11.1014740 10.2776245 10.4594363 2.5257432 11.1176401 7.9884524 0.5257682 4.9587035 10.7579267 12.8933242 4.4326388 12.0536136 13.3502669 10.1364015 4.4892218 1.3737317 7.5075980 9.5149982 13.1963577 6.9786052 6.0111736 NA 8.6724416 4.1107057 8.7165582 9.5559990 12.0809100 7.8074438 2.0111736 0.7887692 11.6363269 6.0612383 1.0111378 8.8267846 NA 3.4892218 8.9172041 9.6405291 8.4995864 10.0710963 9.8440625 9.9033901 5.3837250 10.7286041 10.4955639 3.4892218 6.2536660 4.9851771 10.7646281 14.7335531 7.8368854 9.7376340 10.5464479 10.6964219 3.2912794 -1.7963603 8.8176070 8.8682648 11.0263884 0.5257682 2.2912794 6.1753609 12.2662854 7.0680033 2.0111736 3.7887797 4.6956710 6.2482122 12.5389986 5.7507110 12.4034133 5.7736720 6.9486511 10.5522691 12.9267318 12.5304577 7.4564834 10.6198234 10.9670299 10.6838176 10.4990125 3.4132691 8.7507120 11.9316317 11.2478701 -1.7963603 10.2213220 9.3388854 -0.2112308 5.7531017 9.8106854 10.9497020 10.9391621 9.0795669 15.5618935 10.8517257 9.0948417 8.2604553 3.9042529 12.4475123 5.1345536 11.9333321 10.2846351 9.9607909 11.4598788 8.1196970 10.5199860 1.2989e+00 1.2886e+00 1.3976e+00 -8.2864e-01 6.8812e-01 7.0101e-01 -8.3001e-01 7.2697e-01 -4.3885e-02 9.7064e-04 9.7064e-04 1.3060e+00 6.9453e-01 1.6006e-02 -5.5389e-05 1.1121e-02 1.1121e-02 -1.5191e-02 6.1552e-01 1.9201e+00 -1.6967e-02 3.3127e-02 -7.6962e-01 5.0819e-02 7.8080e-01 7.0817e-02 7.0817e-02 8.0745e-02 1.4207e+00 -7.4681e-01 -1.6567e-02 -7.9218e-01 -8.0003e-01 -7.9903e-01 -3.0540e-02 -8.3438e-01 -5.8862e-02 7.2697e-01 -4.3885e-02 -8.3276e-01 -1.1198e-02 -1.1198e-02 -8.2782e-01 7.1565e-01 7.1565e-01 2.3987e-02 -7.7592e-01 1.6006e-02 -7.8345e-01 2.6654e-02 3.7465e-03 -1.5191e-02 3.4395e-02 3.4395e-02 -1.2929e+00 -7.9603e-01 -7.9653e-01 7.6710e-02 -7.6962e-01 5.0819e-02 5.2749e-03 7.0817e-02 5.7653e-02 4.3157e-02 1.3868e-03 9.9870e-02 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 5.59613607 12.65412674 1.20382760 8.94359817 -0.03919177 12.22332145 -1.79636031 4.89032022 9.28330231 8.34208934 NA 9.25184807 7.30972644 11.07456758 9.45884622 6.47060356 3.37374564 9.89904584 6.99498017 9.85262454 8.65591456 6.32275921 10.76725223 NA 9.69917299 9.90339007 1.78876922 NA 10.78924964 1.66325352 13.11885664 12.56952489 7.12268100 9.79487232 7.67142289 10.14119136 4.29127939 1.90427213 -0.21123078 0.78876922 9.11296071 9.97241552 4.56136891 5.82586956 10.96857104 6.46591245 9.41692185 7.19533972 12.59398654 -0.79610977 13.11703426 -1.79636031 5.91117624 9.86355041 6.10546856 2.29127939 7.89730457 6.21504563 4.11070567 7.86559595 14.07104806 2.01117357 10.19958475 4.54366910 10.60149225 5.49843917 8.19108143 8.00147913 7.885056 9.378119 9.004717 12.053614 11.216091 11.652450 6.011174 9.087225 9.100771 10.086461 12.719579 9.141927 8.868265 8.991720 2.203828 8.664273 11.433087 10.657345 6.285966 9.085673 10.779120 9.294592 9.579378 3.203812 6.011174 11.101474 9.589141 NA 10.059465 10.089853 12.089228 9.706649 6.727380 9.818527 4.803728 1.663254 8.499586 9.573415 10.404410 9.874031 10.027185 8.614269 NA 9.737070 6.750133 6.570140 7.068003 6.322759 10.281248 6.248212 7.740026 13.937813 9.520665 9.756006 11.892942 12.166804 8.729338 0.203765 TCGA-AN-A0AJ 79 0 NA 244 breast stage iib t3 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 7 3 1 NA 2 4 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.665134e-06 5.897349e-07 12.0874628 5.2472174 6.7503868 11.5330568 -1.7413002 10.0886520 1.0659169 10.0142551 11.2871298 7.3955239 9.5352390 6.8842414 9.0666928 9.0333200 6.1892711 8.3800666 9.3400165 10.1169026 7.2358132 7.9467835 9.6341155 9.4655474 13.6016840 10.5352390 9.3891036 10.9391123 7.3774743 10.9189724 -0.1564985 6.7781691 8.5611718 9.5782051 12.9822473 6.9555000 12.5113462 13.3020303 8.5600294 4.3878174 1.0659169 5.4582048 9.6215726 9.3199042 6.4582048 12.8885157 2.5064496 9.6821742 13.2250385 4.0658911 9.5783463 11.7238443 7.3670574 5.9796321 2.0658825 13.8803425 11.9598395 -1.7413002 9.1242663 -0.7415414 4.2585340 10.3624765 11.4250100 9.5554492 10.8283887 10.2988228 9.4624927 2.1654296 10.2833264 10.1215577 6.4969384 6.7056158 5.0267160 10.0378421 14.5408794 8.0107295 10.8990039 11.1794441 8.8425559 0.5804350 0.2585792 7.3618210 9.2010474 10.6267666 NA 5.8359620 6.8321799 9.8116823 10.6446650 7.3056569 7.1165145 6.0067266 10.2210676 12.5372002 4.7179670 13.5634190 7.1411763 8.5218022 11.6206138 12.0613523 15.0371235 6.8207751 11.3763384 11.0155062 10.6966179 10.6430470 4.9450317 8.7781691 12.6975198 10.8563528 -1.7413002 10.2141830 10.1223321 0.5804350 3.9035397 8.9158516 8.9424048 9.9589727 9.2436634 14.9123018 10.3512902 11.0437811 8.4297097 -0.7415414 15.4135093 4.9864519 11.7660799 11.7014765 10.1529719 8.6753304 8.5725498 10.6019575 -0.46312000 3.65690000 1.02140000 -0.00954260 0.41195000 0.08536500 0.39900000 0.73549000 3.65690000 -0.94445000 -0.94445000 2.30350000 0.00940730 3.65690000 0.32914000 3.65690000 -0.02315500 -0.01092200 0.40711000 -0.46982000 0.00000000 -0.26733000 -0.44674000 -0.01009400 0.97523000 1.13310000 -0.00097017 -0.00097017 3.15510000 -0.43843000 -0.46312000 -0.29449000 -0.00954260 0.69055000 2.12300000 0.39900000 0.42267000 0.73549000 0.77791000 -0.03758800 0.82177000 -0.47702000 -0.94445000 -0.52092000 -0.52092000 0.00315110 0.01698500 -0.46589000 -0.43875000 0.32914000 -0.47607000 -0.94576000 0.00593730 -0.45854000 -0.50017000 -0.01270900 -0.24545000 -0.43333000 -0.44674000 -0.01009400 -0.02096100 -0.51208000 -0.00097017 0.22037000 0.39745000 -0.43561000 0.000 0.000 0.329 0.329 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.477 0.747 1.691 -0.488 0.000 -0.239 0.000 0.000 0.329 0.329 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.477 0.747 1.691 -0.488 0.000 -0.239 8.7302082 12.6483660 7.0234051 9.2061699 5.4082805 10.9362526 2.5064496 NA 8.5473989 8.7957514 NA 7.8270022 0.5804350 10.2479275 10.3346806 4.4082771 8.8769184 10.1851997 6.9023896 10.8872064 9.4182783 7.5276600 9.8978737 1.2585189 8.2571233 9.4624927 2.3459924 NA 11.8238731 0.5804350 12.3790139 11.6431819 7.2329475 10.0803070 8.8640125 9.6926399 4.3670565 2.4284640 NA 11.5990786 8.6324856 9.1048068 10.7084554 2.4284640 8.1852441 7.8621594 9.3631319 4.7820940 9.8690966 NA 10.3114407 3.3878174 3.7179670 9.3562953 4.9693393 5.5253203 9.7503861 8.9881538 7.7663275 -0.7415414 14.3599342 -0.7415414 10.4840417 NA 7.9502765 2.4284640 8.5983831 8.1533509 13.559519 7.094583 8.598383 12.511346 9.198112 11.504383 12.888516 11.014881 9.178886 10.757133 15.455010 11.094781 9.201047 10.381684 1.580483 8.704583 11.985709 11.229717 5.734265 8.609472 8.939771 9.763352 10.019623 7.189270 4.843497 10.535239 4.813119 1.428464 5.580462 8.750065 9.480724 10.590010 8.958105 9.655673 11.600191 6.801565 9.555449 10.555449 10.633844 9.246508 10.807355 8.316525 3.258534 8.879321 7.249715 6.854723 10.644665 5.667923 10.648702 10.221068 7.665801 13.677769 10.326304 10.219621 12.470269 10.228639 9.308382 1.428464 TCGA-AN-A0AK 76 0 NA 224 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 3 1 4 NA 1 4 1 2 1 1 NA NA 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 1 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 4 0 0 2 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 1.729869e-05 6.368809e-06 11.7759053 2.7478170 7.0239506 12.4670015 NA 9.5854546 -0.2522259 9.7534511 10.1272049 7.7049287 10.2669714 6.9814463 8.6011360 9.4637886 5.5807153 9.1009734 11.4551857 9.7583547 5.6426438 4.3024141 9.0181220 10.1031776 14.2680155 9.7743501 9.6954636 10.7340242 5.5551812 10.5628096 NA NA 6.7922203 10.4153817 12.6112386 5.6304695 13.4209700 13.8711397 8.2654960 6.0697537 4.7020203 4.0332292 8.1379958 13.2297521 4.9177516 13.1980713 0.3327366 8.7478264 13.7862741 NA 9.5719898 11.1824548 6.0787443 7.0424474 NA 12.7606754 9.2113510 -1.2522259 8.8379391 -1.2522259 4.1053764 9.2496639 10.2220396 10.0453161 8.7826255 9.8233058 9.0573030 -0.2522259 11.0993180 10.1234091 4.7922203 6.1656788 12.8984465 10.5155972 14.3950320 7.9511990 11.4672154 11.5359331 7.4689254 NA 5.4343280 6.0332292 8.9202540 9.4612132 NA 4.6304695 7.9302211 8.8771096 10.3858099 3.9957558 4.6785621 5.0146142 10.8058183 11.6277927 4.1740948 13.4537829 4.8771111 7.4517304 10.1347668 9.8687124 12.8474210 7.8112218 11.3916828 11.2456784 9.9899885 11.5743751 4.0697537 9.3853570 11.6919896 8.9850364 NA 10.1239520 7.9327020 -1.2522259 1.9177373 9.4024625 11.8080159 10.5287764 8.5696005 14.7888868 10.3261992 9.6562193 6.2556216 -0.2522259 15.3213554 4.2713883 11.0043302 9.8854581 6.7701948 8.9742388 8.1508384 9.5802262 -0.3554400 0.4327700 0.3779200 0.0293250 0.0043021 -0.0662090 0.3396600 0.0365120 0.0114000 0.0886920 0.0452210 0.9027100 -0.3745900 -0.3750400 0.0294370 0.0294370 0.0127170 0.0346010 0.0209030 0.0454240 -0.3692900 -0.3498500 0.0577960 0.0577960 0.0577960 -0.3551000 0.3574300 0.3574300 0.0425900 -0.3554400 -0.3554400 0.0000000 -0.7917700 -0.4370200 -0.0927420 -0.4094000 -0.4020700 0.0365120 0.0114000 0.0114000 -0.0386620 -0.0369460 0.0886920 -0.5549800 -0.5401700 -0.1050000 -0.1050000 -0.3750400 -0.3358300 0.0523830 -0.8020700 0.0346010 0.0209030 0.0209030 0.0329860 -0.3692900 -0.3498500 -0.7761700 0.0577960 0.0577960 -0.2315300 -0.3551000 0.3574300 0.0425900 -0.0238400 -0.3359500 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 7.2031542 11.4672154 1.9177373 8.4706341 2.9957558 11.0172455 NA NA 8.9933794 5.8031082 -0.2522259 5.7922203 1.5551781 11.5058416 9.0332289 3.7478278 5.6785649 10.0063926 8.5193162 11.7279662 9.2227594 7.5680055 9.8352895 0.8951475 3.3327938 9.0573030 4.8352875 -1.2522259 11.0823792 0.7478600 12.3850175 12.6408437 5.7136106 10.4158251 7.0742560 10.2406812 2.2072682 2.9957558 -1.2522259 1.9177373 8.8693600 10.2704082 9.9499504 0.3327366 8.7537880 7.3588516 10.9280466 5.9957536 9.9327020 -1.2522259 10.6730101 2.2072682 3.1401406 9.7828387 5.7006256 4.9572785 7.3024150 8.7729661 7.3988779 1.0697709 14.0625160 -0.2522259 10.4246652 NA 8.7293937 4.7701948 6.8771099 9.4220189 12.764388 7.959715 9.142289 13.420970 10.434327 11.006098 13.198071 12.807931 9.369878 10.641128 12.732423 10.600356 8.920254 8.308159 1.747817 7.902645 11.406038 11.5999659 5.7590546 8.4774474 10.0753793 9.8543895 10.5569315 5.0876750 9.3205269 9.7743501 7.0052147 -1.2522259 6.9957536 7.3587409 8.9838407 10.5328703 8.6274099 9.7136109 9.6312336 4.5291838 10.0453161 9.8751762 12.1332846 9.9039097 10.8202942 9.1119611 4.6304695 8.8344802 4.5551842 5.7812495 10.3858099 5.0146142 10.7453589 10.8058183 7.4859186 13.7042027 10.4808419 9.6441589 11.5406169 10.9766453 9.0742560 0.3327366 TCGA-AN-A0AL 41 0 NA 198 breast stage iiib t4 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.446192e-06 2.503025e-07 12.2795582 6.1051878 6.3311911 11.1336428 0.2722621 9.1115011 0.2722621 9.3038837 11.5760781 7.4654121 9.5783591 7.4522066 8.2457557 11.4032968 5.9447226 9.8185488 9.5653858 10.9239470 9.0569322 4.3877761 9.7055349 12.7418544 13.6761526 9.4480548 9.6638989 10.6429847 5.9161542 10.8700395 6.5328250 -1.3125809 8.1569765 11.5267355 11.2327820 7.3562195 11.3845196 11.1400909 11.9909729 5.2108953 -0.3125809 6.2108973 8.6745987 11.1138617 6.8771590 9.2552909 -0.3125809 10.5542274 9.3374890 2.2722920 9.9688361 10.2895697 8.4220446 6.3738361 1.2723219 13.9162114 11.1650021 1.2723219 8.4736043 NA 6.4488861 10.2605087 10.9149507 8.7166219 9.2467119 8.7069256 10.6978629 -0.3125809 10.4062957 10.1287228 2.5942141 8.1791881 NA 6.5265384 16.0111197 6.4701366 10.4101423 9.3148687 11.3347933 2.6873295 NA 6.5576996 9.2390431 10.7083148 -0.3125809 6.4220446 7.2495771 9.9209545 10.8793193 8.9922566 6.0623743 5.4686941 10.2481453 11.7769508 1.2723219 13.2124886 3.2722920 6.8472065 12.2863178 13.4228380 13.3958260 8.2797916 11.5760781 10.2638192 9.7339883 10.3020447 3.7747976 7.9634591 11.6344238 9.7055349 2.2722920 10.7276246 8.9681057 -1.3125809 2.6293799 10.2167654 11.1582478 9.9933966 8.9125424 15.2122132 10.1716542 9.1406054 6.8114556 -1.3125809 13.6658219 6.3020448 13.1807525 11.9577762 9.3929671 10.1198767 8.0558415 9.7566302 0.1251000 0.1251000 0.5316900 -0.7291400 0.7294300 0.0063871 0.0549450 -0.6742600 -0.7445500 0.0210430 0.0210430 0.7192300 0.1404300 -0.7072000 0.3789100 0.3789100 0.3789100 1.9737000 0.6890600 1.1817000 0.0100060 2.4386000 -0.7180900 -0.7180900 0.0516720 -0.0013858 -0.0013858 -0.0013858 0.0091705 -0.7089000 0.1251000 -0.6732500 -0.7291400 -0.0423810 -0.7373100 -0.7434200 -0.7521900 0.0386300 -0.7537900 -0.0202750 0.7912300 0.0265140 0.0210430 -0.7220800 -1.2929000 0.0301720 -0.7156800 -0.7072000 -0.8003600 -0.7395000 0.3789100 -0.7226100 0.6890600 -0.0231550 -0.6106600 0.0000000 0.0086135 -0.0460410 -0.7180900 -0.7180900 -0.7515800 -0.6962200 -0.0013858 0.0091705 -0.0058140 -0.7359100 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 -0.584 -0.584 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 -0.731 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 -0.584 -0.584 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 -0.731 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 8.7694838 13.9271944 3.5942261 10.0047474 5.3877761 12.3093867 4.1467693 2.3877761 8.5912168 10.6527584 -1.3125809 8.2760495 5.5328250 11.1516253 9.3239595 -0.3125809 8.2571903 11.0143260 8.5453159 10.2380816 9.1087265 6.9209542 12.7559452 1.6873295 8.2666507 10.6978629 1.0092755 NA 10.5087102 4.6180742 12.9263366 13.2988784 8.8647544 9.7117819 10.1751749 10.0850095 2.9352711 4.2108953 NA 2.3877761 8.5343920 11.0753521 10.5783590 3.9352617 9.9905561 6.5390843 9.6781480 6.7747976 10.1072950 2.5942141 12.1655989 3.2109031 3.2722920 9.4726565 6.9123014 8.4271154 9.7138583 8.2438409 10.3843023 2.7747976 12.9746865 0.2722621 11.2814261 NA 7.2303664 5.0967257 8.3130435 9.0742750 12.099508 7.338386 9.054749 11.384520 10.250531 11.355998 9.255291 10.914349 9.435528 10.981094 12.868487 10.242883 9.239043 8.154941 3.009258 7.545316 10.898615 10.832630 5.146765 9.045986 9.081798 8.283525 9.551103 7.839620 5.785367 9.448055 3.687329 7.422045 6.726254 8.856633 11.396203 10.269947 8.549972 8.815329 9.296514 7.569978 8.716622 10.331191 11.695588 11.145229 10.051469 9.076428 NA 10.424045 7.872210 10.025514 10.879319 7.641531 9.758797 10.248145 7.234229 13.494438 10.092476 11.542398 12.228552 10.305261 8.413553 3.687329 TCGA-AN-A0AM 56 0 NA 5 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 3 4 NA 1 4 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.899646e-07 2.781139e-07 12.7294514 1.0649518 5.2481515 11.6910954 -0.5199417 8.6573871 -1.5199417 9.3973396 11.2394397 8.3808342 9.3191713 5.8808471 8.7502628 8.9557010 4.7278932 9.3951001 9.8347679 10.1989285 7.1129628 6.1523923 10.3191714 11.4757347 13.6764160 10.0005863 8.8386187 10.5345718 6.6747247 10.0350359 NA 5.4107040 7.3160181 11.9728222 12.8321489 9.1950715 11.4377951 11.2294180 9.9892477 6.7278946 3.1238317 8.2596868 7.7928508 10.5308365 7.1093240 12.2623516 -1.5199417 11.1106897 13.6509879 6.0649303 10.3055385 10.6808662 9.9399113 6.3065156 0.4799548 15.3964924 11.1537382 0.4799548 8.5270915 -1.5199417 4.2078850 9.9818047 9.5799728 8.9104200 9.8550070 9.0103740 9.8967651 2.1804025 9.8153578 10.3872338 6.1804065 8.1506236 3.4799678 11.2199591 14.8489343 7.5135555 10.1011036 10.1156856 10.1269762 3.6498913 4.3379465 7.7015546 8.4729061 11.8069587 NA 5.1664664 7.0345569 9.6423588 10.1510663 6.4629619 6.2078889 5.1804065 10.0422100 12.1371743 4.0035303 13.6256211 6.3564837 6.2678710 11.2210131 13.2099069 12.2944499 8.4771471 10.1537183 10.3928569 10.0858081 10.9559543 4.8294031 8.6906388 11.6805597 9.8419113 NA 10.5040684 9.0488737 0.8019036 2.7286607 9.4363436 11.0171860 10.3124620 9.2423496 15.3756967 13.6077604 9.3207455 7.2776287 1.6498913 15.2205916 6.6894208 12.4694508 11.4003204 9.7057775 9.1065891 9.2743835 11.0637579 -0.2274800 2.3657000 0.4819900 0.0516720 0.2090100 -0.0731370 2.0846000 -0.0673300 2.5231000 -0.3711000 -0.3711000 0.1509900 0.0224440 2.1540000 -0.0637030 -0.0637030 -0.0637030 3.6569000 3.6569000 0.2381400 0.2585500 3.6569000 -0.3799900 -0.3970800 0.5114100 0.5436500 0.1057000 0.1057000 0.6762300 -0.0760120 -0.2561200 0.0049969 -0.1961500 -0.3403300 -0.0731370 0.2581900 0.2581900 -0.0673300 1.0222000 -0.3316800 0.2152400 -0.2386300 -0.4041500 -0.2083400 -0.2083400 -0.2083400 -0.3721100 0.1203500 -0.3883900 -0.1643400 -0.0637030 0.1104300 -0.2968800 0.8510600 -0.0834650 -0.0441440 0.0297470 0.0062481 -0.3799900 -0.4082700 -0.1823100 -0.0778780 0.1057000 0.1212300 -0.1325100 0.1339100 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 8.2953506 13.4515560 5.3747856 9.5352499 4.2537019 10.6685564 1.0649518 NA 8.0854470 8.0872979 NA 7.3367047 6.7928501 11.3980854 9.7219507 3.2348538 4.7087887 8.5832554 9.3709918 11.9003226 9.5711318 7.3958468 9.5956614 0.4397827 8.8776421 9.8967651 3.2348538 NA 10.9597478 1.8019036 12.6002054 12.9641611 6.6845382 9.9083278 9.9156379 10.3849784 2.7278987 2.1804025 -1.5199417 5.2078889 9.3136483 10.2997474 8.2146771 0.4799548 7.8411875 7.2580449 9.5587856 6.1873263 11.2855099 3.6092467 11.9610101 3.4799678 3.9062364 9.3230485 7.3868584 5.6894222 9.0345563 7.6722606 8.6360507 3.8018933 13.8472799 -0.5199417 11.2947503 NA 8.9434918 3.9718194 7.3441539 9.0770889 12.975959 7.792851 8.696713 11.437795 10.512702 11.731894 12.262352 16.305777 8.711189 13.082716 13.849326 9.932724 8.472906 7.701555 4.287325 8.136392 10.424680 10.581615 6.513391 8.539312 8.169966 7.993695 8.513336 6.931178 8.709988 10.000586 9.557451 -1.519942 7.518887 9.334727 10.500600 10.132364 8.544710 9.463674 8.533893 6.769986 8.910420 10.833666 10.443225 9.729674 9.955701 8.398831 1.064952 9.045812 6.906233 7.148853 10.151066 7.713587 10.071022 10.042210 7.613752 13.780356 10.694287 10.420281 12.245461 10.686371 8.496776 1.064952 TCGA-AN-A0AR 55 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 1 0 0 0 0 0 2.224912e-06 5.284165e-07 11.4647682 4.6986074 8.0966387 11.7248235 0.5286713 8.1323090 NA 8.5621054 10.8873337 9.3639433 9.5447943 7.0832708 9.6404702 10.2714130 7.5974604 7.1098829 9.5265675 9.1913509 9.6482720 2.9881211 10.3792600 11.6672743 12.1624724 10.8506105 10.7712612 10.0448749 4.8685337 10.9023416 NA -0.4713287 5.4113245 11.7096794 12.7176576 6.0678409 11.1673446 10.7032961 8.6227602 8.4174255 5.9633100 9.7092133 9.8048069 12.8712433 9.2351785 8.9113066 -1.4711287 10.4426938 12.1321929 11.0374676 10.5513519 10.8258853 5.4235009 3.3866592 2.6986186 12.9244194 8.6280303 2.2291264 8.0620121 3.6161459 2.6986186 9.4995073 9.0344939 9.5482732 9.8889809 8.8884322 10.5423541 -0.4713287 10.8598793 10.7798690 6.1285945 6.5002252 0.1137005 8.5907285 15.0719258 7.5827712 11.0087152 10.4408233 10.1197372 0.8506394 -0.4713287 8.6961006 8.5593496 9.7356968 NA 3.3866592 7.3133175 10.8129282 8.8347441 4.3100420 3.5730715 5.0044160 9.5510503 12.0667501 4.9881120 12.8674188 4.6161459 6.5893785 10.9679939 12.4682617 12.4074997 8.2151830 11.2762461 11.3633510 11.2480713 10.2523434 5.4475461 9.0522444 11.2037574 8.7694739 -1.4711287 10.5723933 9.1922405 1.5286713 3.1748378 10.0054286 8.4310575 10.5240963 8.3214727 14.5761481 11.1143492 8.9653941 6.2701495 0.5286713 11.6273726 8.5385110 11.7576514 11.2041985 10.2814812 9.4879600 6.9549477 9.6548900 -0.84659000 0.05850900 -0.90183000 0.02090300 0.01628600 -0.00097017 1.64700000 0.04826200 0.79491000 -0.03190500 -0.03190500 0.76178000 1.55860000 0.02482900 -0.00664320 0.03905400 1.63130000 2.17420000 -0.86137000 0.45037000 0.00388540 0.73360000 0.02174400 -0.80534000 -0.82931000 0.29867000 -0.04265200 0.01293400 -0.85979000 -0.81326000 0.03481800 -0.87424000 -0.84979000 -0.87634000 -0.87782000 0.04755200 -0.84887000 2.69360000 0.79491000 0.15338000 0.00360760 0.05067700 -0.96316000 1.47470000 1.47790000 0.84514000 0.07671000 -0.02432900 -0.08943400 -0.86955000 -0.02096100 0.87587000 -0.00774820 -0.00512270 -0.86232000 0.15173000 -0.86024000 -0.86923000 -0.07214000 0.01796300 0.69727000 -0.82513000 0.01293400 0.04570800 -0.89312000 -0.04428000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.429 -0.855 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.429 -0.855 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 6.6319700 12.8158898 2.9209983 10.2442155 3.1136505 11.9083316 1.6986186 4.5730776 9.8296070 7.8024782 11.3163810 6.7860709 8.6695123 11.4765020 9.9209999 2.9209983 5.8233035 9.7772030 7.1433924 10.5873507 8.3068091 7.0909254 11.7292746 1.1136338 8.4653203 10.5423541 4.3866661 NA 10.8914482 2.8506194 15.1836541 12.1833185 8.3851079 9.7048555 6.4886837 10.7405708 3.6161459 3.9549500 -1.4711287 3.3360405 10.7816435 10.4486630 5.5730776 6.0755776 8.6790645 7.8950045 11.9248858 6.2360410 11.7661912 5.9633100 12.4570158 NA 4.5730776 10.4763669 6.6875451 3.3360405 7.4082660 6.1285945 4.0832729 3.8140889 13.6907197 0.5286713 10.2186804 -1.4711287 9.8818293 3.3866592 7.9983241 10.6240795 12.994682 8.441572 9.260001 11.167345 10.327154 9.947589 8.911307 11.153021 10.319031 11.266141 12.001246 12.184772 8.559350 6.728355 5.877411 7.528682 9.040435 11.2442155 4.2835736 7.8278673 10.4204662 7.7526844 10.8080928 5.7478519 4.3615719 10.8506105 6.0600647 0.8506394 5.9633100 8.6682851 11.8293210 9.9845234 8.5994338 8.7884257 7.8301786 3.9549500 9.5482732 9.7789809 11.8198532 11.2538357 11.0394466 9.2403494 -1.4711287 10.8116174 5.1868927 7.3001722 8.8347441 7.0871032 11.0119944 9.5510503 7.9986903 15.6900703 9.8551119 11.2623334 11.1924629 11.4174257 9.7350863 6.9757654 TCGA-AN-A0AS 70 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 47.68.0 1 3 4 NA 1 4 2 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 6.952849e-07 8.343418e-08 12.0939804 3.8941581 7.8776713 11.1484007 1.4347216 10.7139515 NA 9.5700096 11.7562801 9.5502050 9.4827606 6.9893162 7.9790484 10.3937638 4.3733280 8.9477973 9.9944236 9.8790525 7.9158543 0.8497591 10.0518891 10.6067385 13.1206446 11.0206292 9.5810844 10.7007334 4.3733280 10.3738172 2.6571140 -1.1500808 8.5168768 10.5853213 12.5003683 8.1784403 12.0176538 13.0649949 12.8646575 5.4347283 -1.1500808 6.8831882 8.4663143 10.3976238 8.2718300 13.0764033 -0.1502409 11.7523288 13.3550186 7.4043539 9.5938423 11.1581043 8.4663143 8.2356275 2.1716872 13.3180800 8.9712987 2.0197019 8.3985872 0.4347750 3.6571255 10.3772423 10.6897564 9.2916719 8.4177213 9.3723469 10.2144471 NA 10.8508215 10.0761775 6.0395903 6.9687060 8.3927970 9.1351675 15.3151723 6.5723683 10.5789612 10.5142126 7.0146722 2.8497591 NA 8.1212284 9.0334007 9.7385086 NA 7.2204528 7.1258897 9.7878747 11.0854804 5.0785842 6.4496786 6.2927081 10.4727323 11.1595258 NA 14.1979402 3.5502112 6.8097668 12.5460809 13.6928030 12.0599800 8.3416184 10.3644793 11.3050925 10.9569431 11.4117692 4.5776886 7.6603368 12.4235308 11.4208069 2.1716872 10.6893628 9.9995124 1.1717192 2.7566604 9.9969703 10.7151119 9.9771149 8.9712987 14.6402411 9.9438430 11.2385898 6.7201307 3.8941581 15.8637967 5.9687060 12.6385856 11.4480505 9.6490469 9.5026103 8.2377826 10.8507371 -0.0392580 0.5352000 0.2873900 0.2999500 0.2156000 -0.1330200 0.3618200 -0.0036011 -0.1118200 -0.7740500 2.1618000 1.4117000 0.2660800 0.5516000 0.1386500 1.0536000 1.0536000 -0.0564420 2.7578000 0.0077783 -0.0762780 -0.0243880 -0.4039600 -0.4039600 -0.4266900 -0.1080200 -0.1080200 -0.1080200 1.0195000 -0.0392580 0.6048500 -0.1467000 0.2999500 -0.7285300 -0.1171700 -0.2579700 -0.1153500 -0.0036011 -0.1118200 -0.1118200 0.3185100 -0.4671700 -0.7965300 0.0835030 0.0940670 0.0501080 0.0501080 -0.3748200 0.7347300 0.1386500 -0.0630320 -0.0564420 -0.4545800 -0.4545800 0.0077783 -0.4376700 -0.0243880 -0.0756120 -0.4039600 -0.4039600 0.2314800 -0.1080200 -0.1080200 0.8445500 0.1940600 0.2009100 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 8.0395897 14.5501779 6.1071522 10.1177223 3.1745822 10.6004722 NA NA 8.2226302 7.7476110 NA 8.4024344 4.7077456 10.0659048 8.8941593 1.6571369 8.1071532 10.0395899 10.2952975 9.8462388 7.9385005 8.1118602 10.1773180 3.6571255 8.9816224 10.2144471 2.9372314 1.1717192 10.8965483 0.8497591 13.5080884 12.5839457 6.8270454 11.4319073 8.1489732 9.2958146 8.0346405 2.3092053 -0.1502409 7.8637855 7.4043539 10.1489734 8.0346405 3.0976951 7.5711041 8.4215179 9.9687064 7.4081862 8.8941593 2.5502112 11.5095382 2.3092053 3.3733280 9.0912719 5.8308181 NA 9.5213064 7.8693557 4.4644722 0.4347750 14.6408519 1.4347216 10.7749488 NA 7.5502050 2.7566604 8.1328534 9.0713524 13.117408 4.577689 8.002050 12.017654 10.186272 10.118307 13.076403 10.363986 9.735462 10.687393 13.143524 10.797767 9.033401 8.964809 NA 6.597959 12.848003 11.099175 2.550211 9.559694 8.666749 7.009637 10.842013 6.442222 9.556261 11.020629 5.493622 1.657137 8.469985 7.401089 12.257697 9.998242 7.162648 9.401473 10.399550 2.550211 9.291672 9.774578 10.816992 10.861342 10.610901 8.993148 8.434728 8.900036 6.267618 2.657114 11.085480 9.398587 9.880432 10.472732 7.404354 15.408126 10.124726 10.271304 12.721959 10.403395 9.599635 1.657137 TCGA-AN-A0AT 62 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.844604e-06 5.897349e-07 12.6805802 1.3754009 6.8919805 10.6623479 -1.7943573 10.1795362 1.3754009 8.8717041 11.4637517 8.5837752 8.9528341 6.5363964 9.0023309 10.0176575 7.9248689 9.4088282 7.0352027 11.2287147 9.1235979 7.1183691 10.6432323 11.5173703 12.8827593 9.7412415 10.5991388 10.5575236 6.1654819 9.8366571 5.8919805 -0.2095616 8.1435893 12.1634890 12.7493578 8.7349108 10.8616815 10.6408900 9.2040705 6.8493363 3.3754009 7.5206297 7.6730857 6.8016696 8.9033164 6.8238653 -1.7943573 11.1987724 6.4908830 8.1509242 9.4167602 10.0770005 8.4897260 5.8421039 1.2054551 14.2366218 8.9093663 -0.2095616 10.5737137 2.3754009 4.2278489 9.0796930 10.6963310 9.1553068 8.5431022 9.9287145 10.6756306 1.7904384 9.5217618 11.4000831 6.6771558 7.2822962 3.0128368 8.6700259 14.4471654 8.0371993 10.5217617 6.9933823 10.0946039 3.0128368 NA 9.2580482 9.6359326 9.6212218 NA 6.0256601 6.7600692 11.0393585 8.1347384 4.6812131 6.1421173 6.8201905 9.7600690 12.5875637 -1.7943573 13.4298587 4.7132724 7.3087677 10.7862098 10.8482088 13.1790430 8.4710952 10.7297770 11.3514123 11.0124264 10.5983342 5.1002965 8.2769423 11.7756917 7.1450589 4.7600666 10.4453770 9.7653352 1.5274207 3.6107945 10.1479946 8.5464431 10.0560577 9.8081791 15.8732154 11.0403462 9.7107956 7.2195006 0.2055176 11.7587495 5.6063593 12.3829776 11.0852548 9.9351009 9.6291214 7.7639008 10.1491964 -0.3407900 0.0389130 0.4648500 0.1632500 0.0567980 0.0298880 -0.6337900 1.7623000 0.0382060 -0.6483700 0.0223040 -0.0070576 0.8982900 -0.6420800 0.1402800 0.0254320 0.1626500 -0.0716060 -0.6459300 -0.5215400 0.0434400 0.6630900 -0.6850600 -0.4331100 -0.0572500 -0.3082700 -0.0396650 -0.0659840 0.0000000 -0.6750800 -0.3407900 -0.6992900 -0.6214000 -0.6761900 -0.6169100 -0.6337900 -0.6337900 0.1719600 0.0382060 1.2181000 0.0069435 -0.6595700 -1.2929000 -0.4207500 -1.2929000 0.0111210 -0.6629100 -0.6482800 -0.6622600 0.0026357 -1.2929000 0.0176610 0.0012481 -0.6709500 -0.6088300 0.0083767 -0.6776600 0.0061090 -0.6850600 -0.4331100 0.6511200 -0.3170400 -0.6753600 -0.6848700 0.2861200 -0.7062100 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.661 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.661 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 7.8293619 12.5583512 6.2661756 9.6243868 3.2929437 11.7922027 2.4534122 3.2054864 8.3915946 8.3270136 5.7979364 7.4839294 3.8201892 11.6686213 9.5115418 3.9334027 6.8601161 11.1786394 6.9769696 9.1457939 9.0133179 7.9452606 10.3634586 0.5273707 8.7231496 10.6756306 4.2278489 -0.7946075 10.8663674 5.6317446 12.8086428 12.2821288 6.9197262 9.4020824 7.9570242 9.8307324 2.6649151 2.5274207 0.5273707 7.8902290 8.4722668 10.2107538 6.9128391 8.3205239 8.1403063 5.9736641 10.0088041 6.9334003 10.3536389 4.3754079 12.4468675 2.3754009 3.7904384 9.2958309 7.7879796 6.6191078 8.1376951 8.0431082 7.9265795 5.7290415 13.3727023 NA 11.5494986 NA 9.2742584 3.1596776 8.0743026 8.3640900 13.460093 9.022464 9.112371 10.861682 9.494923 11.498089 6.823865 11.918115 9.982324 11.133017 13.043601 12.545052 9.635933 8.991750 5.216707 8.175586 10.166568 10.402390 6.350138 8.767703 8.197002 5.545329 9.275601 6.429482 4.490885 9.741241 1.527421 NA 10.497514 9.840223 11.682353 9.967031 8.650971 9.943572 8.435501 7.213909 9.155307 10.252604 12.928661 11.518080 10.295593 8.905920 NA 8.433481 6.287629 7.311389 8.134738 5.112371 9.833748 9.760069 8.371957 14.813186 10.327014 10.787152 12.320280 11.248678 8.818349 1.527421 TCGA-AN-A0FD 71 0 NA 196 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 1 4 NA 2 4 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.668684e-07 12.35181911 5.43542191 8.51918883 11.68086974 -0.08819339 10.20302908 NA 9.46644726 11.64783744 10.68705710 9.92378444 6.66005153 9.23040118 9.31167045 9.04500058 9.04242902 10.31167033 10.76360744 7.32124897 3.99932358 9.59045849 10.36049092 14.31733231 10.75499428 9.98666890 10.93318540 6.10168369 10.04114139 NA 3.49682023 7.25170868 10.46932211 12.91660557 8.39969833 12.02982610 13.11795701 9.45585693 7.09176752 4.40371083 7.55571494 7.82474749 10.38200889 7.60882624 13.05108997 -1.08804003 11.40596397 15.25348146 0.49682023 9.20871721 10.18914579 6.86605486 6.41965349 1.23376538 15.49860438 8.51698587 0.91188329 8.84111677 -1.08804003 4.15978255 9.13223674 9.14307959 9.06414320 10.68623367 9.70057670 9.98399100 1.23376538 10.73999489 10.10723055 5.93422633 7.52656810 4.08178273 12.75047145 15.11478571 6.54194378 10.52426618 11.16422815 9.94045514 2.23379605 5.40371083 7.74790898 8.96578428 10.43296807 -1.08804003 6.37129051 8.10907529 9.71760223 11.28961122 7.21563880 5.40371083 5.32124987 10.48218850 12.41357121 2.08178273 13.59001836 5.35480123 7.84554901 11.81215917 14.23909525 12.40546372 8.87330814 10.98265018 11.10599962 10.94531580 10.58428373 3.91185453 9.08178353 11.72243003 10.27708720 -0.08819339 10.13586009 9.01645704 NA 3.08258338 8.27599316 9.19262916 10.36718561 8.36923919 15.35863479 10.41319802 10.09673373 6.84849650 1.23376538 14.57974609 8.58428382 12.26058657 10.54848306 9.97120281 9.77216939 8.09673360 10.32459754 -3.4381e-01 7.2928e-02 1.0624e-01 9.6833e-05 7.7050e-03 -2.0510e-01 8.4323e-03 -3.2272e-02 -3.2272e-02 1.6881e+00 -6.7042e-01 -1.0119e-03 1.3311e-02 7.5641e-03 0.0000e+00 0.0000e+00 0.0000e+00 -7.1438e-01 5.2457e-03 5.7890e-03 2.5910e-02 -7.0750e-01 1.9040e-02 -5.7311e-01 3.6569e+00 1.3570e+00 1.8621e-02 1.8621e-02 1.3380e+00 -3.2789e-01 -3.4381e-01 -7.4082e-02 9.6833e-05 -7.1882e-01 -7.3137e-01 8.4323e-03 -6.0604e-03 -1.8944e-02 -3.2272e-02 -3.2272e-02 1.0595e-02 8.9893e-03 -7.7096e-01 7.9013e-04 -7.2564e-01 4.2602e-03 4.2602e-03 7.5641e-03 2.2122e-02 1.6383e-02 0.0000e+00 -7.1438e-01 2.0861e-02 2.0861e-02 -6.8230e-03 -7.1304e-01 -7.0750e-01 4.2265e-02 -6.8873e-01 -5.7311e-01 1.7502e-02 -6.7014e-01 1.8621e-02 3.3225e-02 -7.2820e-01 -6.8426e-01 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 8.70302143 14.50285472 6.47410015 9.47123543 0.91188329 11.40446273 8.20417985 NA 8.67673003 10.09176752 1.23376538 8.47410097 2.37128005 10.32018815 9.94940536 1.49682023 8.19030768 9.07550803 7.43542024 9.73442918 8.44368828 7.23378646 11.15175521 1.71922726 9.65921227 9.98399100 0.91188329 -0.08819339 10.73522565 2.23379605 13.71765265 12.10799942 7.92308558 10.39466633 8.77759166 9.99334178 2.37128005 0.91188329 NA 6.93976490 9.42755820 10.12799793 10.15145689 4.81874833 6.12131179 7.31700010 9.95898227 5.52656966 9.60447391 -0.08819339 13.06738819 3.15979062 3.71921630 10.17314243 6.59393934 5.54121435 10.37384937 7.21106672 7.91185813 0.49682023 14.36718563 -1.08804003 11.36074905 NA 9.97929271 3.99932358 8.01776717 9.33812308 13.090972 5.541214 7.972554 12.029826 10.357908 10.292319 13.051090 11.018421 8.904797 9.933533 12.487043 11.809515 8.965784 8.844073 2.081783 8.852906 12.618354 11.210494 7.183322 9.101683 9.833699 7.265005 11.146113 6.286898 8.269411 10.754994 7.220197 3.666745 6.009891 8.043278 11.039530 10.623955 8.051410 10.011864 11.754012 5.639779 9.064143 10.528407 11.467167 9.353765 10.816493 9.232659 5.041142 9.248856 7.291237 6.706274 11.289611 7.541215 10.928319 10.482189 6.900543 14.454376 10.267209 10.298799 11.973736 10.477912 8.943904 2.818748 TCGA-AN-A0FF 32 0 NA 141 breast stage ia t1b n0 m0 2-10-2014 female 2010 172 NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 5 2 NA 2 1 1 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 8.343418e-08 11.7689417 7.4829305 6.2163287 11.5654959 0.8800194 10.1454269 NA 9.7559493 12.3210192 12.0859617 10.3778981 7.8732675 10.1127070 8.7736512 8.5997775 9.4384669 10.2978988 10.2581243 6.8342422 2.6455864 10.6389357 9.2995851 13.8275371 8.5510565 9.5475127 11.2485527 6.6666430 10.4380766 NA 2.6455864 8.2689246 12.3355790 12.5633919 7.9568617 12.2535640 13.6214290 9.3598266 6.1801697 3.8435216 6.0659126 8.0318241 10.0738181 6.3263018 13.3008487 3.7675701 11.2672020 14.9237230 4.9331571 9.7452847 10.6630445 7.8596143 9.7460888 2.6455864 14.1218906 9.9648546 0.1431322 7.3492812 NA 4.7078671 9.9838586 10.1719076 10.4075232 11.1638292 9.2358379 9.3386580 1.1430668 11.0404220 10.5202912 6.0895003 9.0216427 2.7280511 11.1897500 14.5243307 8.8073739 11.4636932 11.1374341 8.0419340 0.1431322 6.1127064 9.0389083 9.3774990 11.4290608 NA 5.4284841 7.5860238 10.2274462 10.9605974 6.9200622 7.5210138 4.2585566 10.5318156 11.8101922 4.4160966 13.7212568 6.3460208 7.2446188 11.7010230 11.4485725 12.7403573 9.3146745 10.5966943 10.8769434 10.7208242 11.4472419 5.2305450 8.8912737 11.9443849 10.1663730 -1.4418303 10.2659087 8.9568620 1.8800586 3.6472800 9.2375984 10.7324197 9.9557929 8.7355377 15.1037011 10.3569949 9.7875379 8.7504109 0.5580717 14.6916618 9.8078242 12.8497925 11.3664791 10.1093458 9.5545917 7.9331577 11.1231060 0.83982000 1.19190000 1.60850000 0.00000000 0.47512000 0.00903120 0.00291330 -0.00304750 -0.69505000 0.00833510 0.00833510 -0.01001800 0.00374650 0.00374650 -0.00507460 -0.00507460 -0.00507460 -0.00208720 0.45581000 -0.03640100 0.00458000 -0.00581400 -0.00539920 -0.00539920 -0.00539920 -0.01271300 -0.01271300 -0.01271300 -0.00304750 -0.01183200 -0.00097017 -0.00069303 0.00000000 0.00903120 0.00696590 0.00291330 0.00291330 -0.00304750 -0.69505000 -0.70523000 0.00136280 0.00360760 0.00833510 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00374650 0.00138680 -0.00470790 -0.00507460 -0.48500000 0.45377000 0.45377000 -0.03640100 -0.00830050 -0.00581400 0.03326700 -0.00539920 -0.00539920 -0.00180140 -0.01271300 -0.01271300 -0.00304750 -0.27272000 -0.68433000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.681 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.681 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6783561 12.9501001 5.5915418 9.3402974 3.4422269 11.8343880 2.3654686 -1.4418303 8.6255525 6.5804862 0.1431322 7.1430811 3.6455864 10.4188173 9.4514197 2.3654686 9.7596296 9.8359867 11.9357354 10.5006327 10.2649983 8.0479664 10.7460888 4.2019710 9.7460888 9.3386580 2.8800390 0.8800194 10.9355999 3.9504311 12.1165389 12.1573337 7.6376030 10.2380380 10.7602420 9.0767712 1.5581207 2.0175656 -1.4418303 8.1728280 8.9407423 9.6659891 10.2498618 6.0895003 8.6842160 6.6242077 10.5482222 5.4407629 9.4461003 NA 11.4894097 2.2585491 3.9504311 9.5006840 7.3248790 5.3394795 9.7411332 8.8330786 7.6976696 1.3654686 13.6319669 1.5581207 10.9870017 2.1430668 8.0639300 5.4161000 7.6822397 9.3029521 13.2472754 6.0419329 8.4114279 12.2535640 10.4454454 11.7162545 13.3008487 12.1310552 8.9973881 10.6518658 13.3014800 9.8446760 9.3774990 8.6835315 0.5580717 7.0499716 12.1724830 11.143550 7.416099 9.178338 9.441525 8.656150 10.548261 7.720510 10.165448 8.551056 7.169143 -1.441830 7.526785 8.414653 10.361846 10.206476 10.070365 9.510859 12.568384 6.661406 10.407523 10.709452 9.243743 9.813737 10.943172 9.359827 -1.441830 9.752413 7.841855 6.728043 10.960597 5.906847 10.854174 10.531816 8.228881 13.371649 10.668275 10.392984 12.227335 10.321745 9.600462 2.465008 TCGA-AN-A0FJ 59 0 NA 242 breast stage iv t2 n2 m1 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 8 white not hispanic or latino 47.68.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.254869e-06 4.509738e-07 11.0937306 1.2636354 7.2692361 11.2498092 NA 10.2207136 NA 9.5397360 12.6334815 9.1447255 9.4018834 8.7871735 9.0596511 8.9915320 8.3350741 8.7554648 10.0101259 10.8008300 8.0612729 3.0709732 10.2119788 12.4158964 13.8483980 11.1910192 9.4851988 10.1347468 5.7065554 10.4864065 8.1493081 4.4335337 9.1153605 12.5159814 12.7015080 6.4827805 11.4285185 12.7941399 9.3510744 8.2692361 5.6386502 6.2408924 7.8258543 11.9772129 10.1036027 7.2804200 NA 8.7393449 6.7230438 7.1091014 9.0580275 10.9597097 9.4706259 5.8334670 5.0965022 11.5321887 7.3025302 NA 7.6814640 NA 3.8485779 9.2192615 10.5239432 9.0033923 7.8746365 9.1293448 10.3168587 9.1431949 10.9662172 10.4724556 5.6034602 6.2859792 6.7312172 7.8296657 15.8394906 7.3022560 11.3280175 10.1637236 11.4038023 2.7230342 0.8485578 9.2148963 8.9983213 8.9430918 0.8485578 5.6730023 7.1401283 10.6073525 12.0455860 5.3721372 4.8485729 6.3928944 9.2090554 12.0911528 -0.7364848 12.7666919 3.8485779 6.2293957 11.8481044 10.3838495 12.6851505 7.3616438 10.5725194 11.4574449 11.0462495 11.7421284 4.8182012 8.9128678 12.2297565 4.9074676 0.8485578 10.0996620 9.8076101 0.8485578 8.4209838 10.5639641 8.1794911 10.5221776 8.0580275 14.7323311 10.0965016 9.5350747 8.0901601 0.2636354 11.6759168 3.5115439 13.7200944 10.4165302 10.0050785 10.0539601 8.2207135 9.8845645 -0.2293900 0.1648200 0.0714590 -0.3753200 0.2388300 -0.6891100 0.8863500 0.1123500 0.6778000 0.0620040 0.0620040 3.6569000 0.0000000 0.0216700 0.9026000 -0.0087873 0.0454690 0.1598700 1.1587000 0.1190100 -0.7019500 0.8002300 0.0061749 -0.6936400 -0.4329500 -0.0311580 0.1016900 -0.0093393 -0.7655700 -0.1610900 0.5513300 -0.0540870 -0.6912000 -0.8072900 -0.6937400 -0.6979800 -0.6900200 1.6783000 -0.6950900 -0.7328900 0.0209690 0.8008200 0.0547280 -0.7020400 -0.6850200 -0.7054500 -0.8043900 0.7785800 -0.1261000 -0.0991460 -0.7054500 1.7242000 -0.1261000 -0.2356400 0.0922700 -0.7048200 -0.8421500 0.3361700 -0.7654000 -0.5042700 0.3185900 -0.8276100 0.0620040 0.0674430 -0.2645000 0.0159330 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.200 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.200 7.0837910 12.8847477 NA 8.6730027 4.5490161 12.7465456 NA NA 8.6473159 7.9605789 8.8947887 10.3344034 8.8485741 11.3494160 9.0383986 1.2636354 7.1153610 10.5633920 4.9915309 8.4435209 8.3652984 7.6079073 11.9894039 NA 9.3928946 10.3168587 0.8485578 NA 9.7614635 7.3025302 13.4293822 12.9879123 8.9253898 9.4924303 6.3510753 10.1177008 6.2061255 2.8485779 0.8485578 6.1339765 8.9898299 9.1584294 7.4031629 7.6730023 9.2437512 5.5855395 9.2551334 5.0965022 10.6740629 5.9778569 12.5546384 2.8485779 3.9640474 10.1162270 6.6505951 0.2636354 7.7352866 7.7753640 2.8485779 4.5115376 14.2451343 1.8485578 11.4250585 NA 9.2466052 5.2636129 8.3377530 5.7393459 10.952115 8.983000 7.859801 11.428519 10.306639 10.859335 7.280420 11.984497 9.430239 10.849513 12.361479 12.583707 8.998321 7.771406 4.818201 7.647316 7.297035 10.781773 7.779312 8.889321 10.184709 9.088570 10.136086 4.878323 7.211979 11.191019 10.113798 2.848578 9.539736 10.203837 12.991000 10.691448 7.601590 8.791089 9.292899 4.351077 9.003392 9.926280 11.527761 9.983856 10.116921 8.710695 NA 8.501132 7.156853 3.070973 12.045586 4.964052 10.626651 9.209055 7.525706 15.098255 10.628293 9.560528 13.955355 11.562247 8.574225 4.723045 TCGA-AN-A0FK 88 0 NA 213 breast stage iiib t4 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 5 5 3 NA 2 1 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 3.059253e-07 11.3707860 4.7238862 7.0087659 11.5017307 NA 10.5326906 NA 9.8824769 11.4084114 7.5254229 9.2269829 7.2143832 9.4628811 8.7933064 8.1591003 8.7340091 10.1828548 9.7872421 6.0335706 1.5741500 8.9898798 10.1763728 14.5085199 11.8960660 9.4196280 10.4046531 4.5048746 10.6260232 -1.4258500 1.5741500 6.5166519 10.1548676 12.3623464 6.3943169 12.3310069 13.8478607 9.3406669 8.8173118 6.0170823 5.2034948 7.8756339 12.3856130 5.6185323 13.6233058 1.8960781 11.1318410 14.5702804 3.3814910 9.8245192 10.6256867 8.4613587 5.2034948 -1.4258500 15.5460746 10.4734948 0.1591125 9.1439936 NA 5.3814945 9.7945163 10.4305635 9.9078524 10.3113853 10.3505709 9.4521889 0.8960781 11.2952371 10.1805431 6.7981400 7.4070281 4.1287306 12.4932806 14.7410267 6.5809972 11.3231693 11.1763728 8.6402272 1.1591125 4.1591044 6.2536187 8.3206521 11.1045442 0.5741500 6.4930004 7.8101519 8.9173237 10.6741432 8.8409245 3.7034219 2.5741500 10.3697718 11.7545133 0.1591125 13.4400645 7.0004023 8.0458132 10.1050319 11.1366189 11.9918586 8.2483304 11.0754775 10.5871116 10.4491192 10.7719689 4.5965058 8.7327474 11.1906868 10.0654901 NA 10.0624802 8.7799311 1.3815049 2.4915709 9.1591003 11.7610259 10.0139688 8.0799493 14.5000864 9.9669919 10.1094133 8.2918144 -1.4258500 16.1755968 8.0639861 11.3227501 10.3923206 9.6307757 8.9491774 8.2016716 11.3120211 -0.4114600 1.1072000 1.2370000 -0.0045695 -0.0045695 -0.4182700 0.3713400 0.3690400 0.3690400 0.3595300 0.3595300 0.3595300 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3437200 0.3458300 0.3458300 -0.0013858 0.0020805 -0.3867400 -0.0097877 -0.0097877 -0.0097877 0.2827900 0.2827900 0.2827900 0.0000000 -0.3816800 -0.4058400 -0.3688400 -0.0045695 -0.4182700 -0.4182700 0.3713400 0.3664100 0.3690400 0.3690400 0.3644400 0.0000000 0.0000000 0.3595300 0.1986200 0.1986200 0.1986200 0.1986200 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3458300 -0.3997500 -0.3997500 -0.0013858 0.0020805 -0.3893300 -0.3832500 -0.0097877 -0.0097877 -0.0052610 0.2827900 0.2827900 -0.0088143 -0.0103700 -0.3773000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 6.9919900 12.6239014 2.4810406 9.4414167 3.0335640 10.6675555 -1.4258500 NA 8.3472772 7.8938099 -1.4258500 6.4750054 -0.4258500 10.0942655 9.1229597 1.1591125 6.6721693 9.2287740 11.5490902 10.8170143 9.3548008 7.2641357 11.3406668 1.3815049 10.1525106 9.4521889 2.7440534 1.3815049 10.7731967 1.7440750 13.0495547 12.0339537 7.4689555 10.7605617 7.6482792 9.7213429 NA 2.4810406 NA 0.1591125 8.7945163 10.2256381 9.9610782 2.4810406 6.4066489 6.7238848 10.4336728 6.7034205 9.0888521 NA 13.8665315 1.1591125 6.5514176 9.8493486 6.0770891 5.0819318 8.9095283 7.8409245 8.3538574 0.5741500 13.8679328 -0.4258500 10.7034210 NA 9.3595904 6.1439933 8.1496770 9.0139688 14.018284 5.128726 7.776262 12.331007 10.097210 11.979013 13.623306 11.129925 9.501279 10.809554 13.258119 10.473872 8.320652 10.357136 3.661601 7.045813 12.047970 10.8841826 6.8315251 8.7848092 8.6602741 8.5992776 10.4103500 5.5514176 8.2412496 11.8960660 5.2745785 5.2323499 9.8635805 6.7885539 9.6839685 10.3071532 8.2901000 9.6253468 12.4772666 5.2034948 9.9078524 10.6718409 10.6209209 9.6388806 11.0597157 9.3604075 0.8960781 9.4888819 11.8817571 6.1363801 10.6741432 6.0170823 10.1925234 10.3697718 6.9448257 13.0519594 10.0030214 10.7005197 12.6788186 10.2157382 8.9535164 2.6615900 TCGA-AN-A0FL 62 0 NA 231 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4.232215e-06 1.110089e-06 12.6311955 1.6889860 7.1152601 11.9071259 NA 9.0515652 NA 8.4908192 10.5443087 6.7885304 8.3894347 8.0237471 10.1768352 9.5073491 7.2347868 9.0134972 10.9724143 10.0377233 8.7065989 1.2035771 10.6006012 12.1808483 13.4743309 9.0652756 9.9246675 10.5816464 2.6889860 10.3769956 6.9743974 NA 5.5109967 8.2303683 11.2251036 4.2035692 11.7232046 13.1300868 10.0763972 5.6231060 2.5820742 6.0109230 8.2545052 11.4338291 4.3734951 8.7990125 NA 9.0211915 11.5822967 7.6889951 9.3379947 10.6006012 2.3410749 8.3225096 0.4666532 15.3768140 7.1248141 -1.1184137 8.7930323 NA 4.0910905 9.7809972 9.0018782 8.4266048 9.0578133 9.6061540 10.5889994 1.6889860 10.4857301 10.0070538 5.8241543 6.8816402 -0.1184137 6.9849277 15.0742028 3.5848543 9.4871197 7.6498245 11.3055441 2.9691044 NA 7.2035682 8.5200761 9.6547794 NA 5.1104593 7.5254965 9.1449095 10.1571828 4.7145313 2.5820742 3.4052027 10.3889393 11.2167514 0.4666532 12.1974974 4.7885291 4.8123801 10.9631237 11.4602488 12.2368537 8.6809217 12.3544580 9.7042111 9.5155437 10.2734209 3.3410749 8.8617799 11.7947167 9.7089830 4.4052027 9.9150633 9.1531033 NA 2.5842891 10.1606704 7.6825403 8.5663890 9.1554358 14.8931078 10.2819861 10.0377233 7.6695427 2.0515809 13.7054553 6.2303683 11.7359243 9.9816455 9.5864086 9.5191707 6.9477293 10.7181088 0.97152000 0.91743000 0.90452000 0.00083195 0.75375000 -0.01532900 0.02034300 0.62388000 -0.02109800 -0.87720000 -0.87720000 2.15180000 1.44710000 -0.01519100 0.65866000 0.03298600 0.03298600 -0.87557000 -0.87190000 -0.04495700 0.00166420 -0.87354000 -0.84659000 -0.84659000 -0.60177000 0.75108000 0.03397200 0.05722600 0.00763920 -0.85281000 0.22468000 -0.90320000 -0.85043000 0.00546450 -0.84891000 -0.90578000 -0.89794000 0.64886000 -0.02109800 -0.01519100 0.78176000 -0.01188700 0.04670000 -0.00830050 -0.00830050 -0.00830050 0.00055459 -0.01519100 0.75949000 0.05195600 0.38171000 -0.87557000 -0.86578000 -0.86727000 -0.02370300 0.00499690 0.82980000 0.03933700 -0.85480000 -0.60622000 -0.86452000 -0.77727000 0.77368000 -0.01807800 0.02412700 0.84081000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.873 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.873 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.749 0.000 0.000 0.000 5.8589209 12.3244542 5.0714667 10.9927759 2.5820742 12.3318205 NA 5.2035692 9.2203766 10.3219904 NA 7.4207990 -1.1184137 10.9260344 9.3654561 NA 4.1295715 10.7546998 10.0515653 12.5613403 9.0561291 6.8928670 12.3936399 0.4666532 9.1354877 10.5889994 1.6889860 NA 9.3482267 0.8816646 13.4441212 12.7265422 7.2867814 9.2718092 9.6390302 10.2463221 2.3410749 3.4666010 -1.1184137 0.4666532 9.9060874 11.2960612 11.7190711 2.8816450 9.4815252 8.5236921 9.8094183 7.5146352 11.7792967 7.4246719 13.3573104 1.6889860 3.8816450 10.4356966 5.3709280 -0.1184137 7.8816402 6.3245838 2.0515809 -1.1184137 13.9612917 0.8816646 11.4034860 NA 10.7220248 5.2910325 7.8182779 9.2147956 11.004769 6.307906 8.367470 11.723205 9.582947 11.428052 8.799012 8.552296 8.742929 8.919187 12.591263 10.532692 8.520076 6.051566 2.341075 6.365456 10.653542 10.592016 5.623106 9.457180 8.575127 4.662997 10.136238 3.926037 3.688997 9.065276 7.554065 8.225936 10.109256 7.046045 11.782507 10.286250 7.507349 9.604448 7.770384 2.466601 8.426605 10.935566 11.144909 11.060927 10.491281 8.669543 NA 9.763374 6.466603 2.688986 10.157183 5.436228 10.525046 10.388939 7.265345 14.346920 9.896358 11.775511 9.212557 10.068992 8.659717 -1.118414 TCGA-AN-A0FN 61 0 NA 218 breast stage ib t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 8 2 2 NA NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 5.562279e-08 11.17651084 8.93628576 7.14227353 11.05740390 1.89091357 10.58501885 0.01649632 10.02345664 11.21405557 9.58628493 9.63420281 7.92331976 8.82056033 9.54846052 7.77131713 9.47586088 9.20543015 10.76098285 8.95110313 4.40874582 10.19840980 10.49654634 7.99942281 11.08610284 9.49890125 10.67166189 7.60139196 10.37251446 1.60141128 1.75339060 9.70467955 12.05523403 12.43595065 8.72723569 11.94062325 10.95036583 10.46454565 7.03879721 3.71687021 7.97643123 8.70526225 8.32476831 9.18301078 12.13363949 0.01649632 11.82927511 12.40597104 5.57101841 9.76853122 9.08699760 7.83873436 5.48674976 NA 14.52841931 10.09369010 3.71687021 8.48403499 11.31487379 6.57101841 9.58691746 10.69708189 10.01595955 10.98821233 9.75395830 10.29255366 2.51893793 10.95967671 9.88576607 5.51892849 8.26118947 0.01649632 9.82807157 15.54182777 8.56736861 11.17903046 11.15683306 9.25164573 2.75339060 4.31410918 8.14742882 8.86191940 11.50108440 1.43146250 7.76462217 6.78901842 10.35330774 11.56235907 7.42015140 7.73296311 5.52949927 10.60919776 11.51361584 2.13191868 13.90634516 6.13882675 8.07351875 12.85792814 13.84410281 12.74774833 8.52025487 10.26791169 11.29371671 10.61623684 10.69854607 4.31410918 8.49351284 11.81152197 9.64213818 0.43146250 10.59919857 9.14485322 1.23884799 3.07992419 9.56010562 10.88190485 10.12277417 8.81300962 15.45525365 9.79121630 9.88782118 7.79121630 2.60138750 14.95953932 8.28633504 13.91691880 13.01148979 9.43498469 10.00558722 8.36072508 9.63524924 -0.16018000 0.23917000 0.23917000 0.00133980 -0.00732120 -0.00106130 -0.00115570 -0.00281760 -0.00281760 -0.00419420 -0.00419420 0.00592280 0.00052693 0.00000000 0.00120100 -0.00203940 0.00078495 -0.00627540 -0.00198680 -0.00101710 0.00244990 0.00439400 0.00508880 0.00508880 0.00508880 0.00217230 0.00217230 0.00217230 0.00564480 -0.16018000 -0.16018000 -0.00299790 0.00133980 0.00536680 -0.00106130 -0.00115570 -0.00115570 -0.00281760 -0.00281760 -0.00281760 0.00050760 0.00050760 -0.00419420 0.00522780 0.00522780 0.00522780 0.00522780 0.00000000 0.00000000 0.00120100 0.00078495 -0.00627540 -0.00198680 -0.00198680 -0.00101710 0.00244990 0.00439400 -0.17138000 0.00508880 0.00508880 0.00078495 0.00217230 0.00217230 0.00564480 -0.00571470 0.00703550 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.60420683 14.90992046 6.94716702 10.60013890 5.73323773 10.15342042 5.17293549 1.01642500 8.39580787 9.66328804 -1.56832356 8.81568942 4.45383361 10.25004895 9.52488428 1.75339060 10.83501152 9.62991191 10.87077828 9.30106058 9.18188920 6.99370946 12.88409416 4.01642500 7.91326642 10.29255366 4.47586311 NA 11.15811072 2.33836736 13.23408415 12.10885611 9.74718244 10.33760585 9.20130476 9.25324074 3.56075163 1.43146250 -0.56853750 3.64092165 8.33985935 9.96187318 9.76518116 7.10389204 6.87150486 5.08968034 10.52323271 6.45937260 9.59574532 0.01649632 11.65184513 3.60138750 5.73524867 9.44413323 5.98421336 7.39725107 10.17714119 9.60576840 9.11796744 1.60141128 13.85244678 2.67940128 10.55688028 -1.56832356 8.92131463 6.75339461 8.12843415 9.18049824 12.553471 5.978360 8.462134 11.940623 10.487088 10.501252 12.133639 11.067412 9.185294 10.518598 13.661262 10.095025 8.861919 8.932309 -1.568324 7.437091 11.052832 11.170192 6.038796 8.996569 8.661487 7.744349 9.911999 8.452447 7.578672 11.086103 7.169559 3.475863 5.669871 6.307984 11.663738 10.986775 8.022054 9.115339 10.762384 7.933304 10.015960 10.696789 10.805691 10.349957 10.418020 9.075323 -1.568324 9.779171 8.672151 8.595116 11.562359 9.291002 10.795875 10.609198 6.943219 14.024417 10.059001 10.701178 12.718818 10.378008 9.050770 3.560752 TCGA-AN-A0FS 55 0 NA 191 breast stage ib t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 8 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040709e-06 4.162835e-07 11.29191592 9.85026046 6.72246056 11.79878955 1.18846423 10.17242601 -0.39649827 10.02137243 12.02295344 9.51840334 9.79581272 8.37390830 9.89430667 9.26113610 8.64973436 8.87886846 10.37995295 9.72677912 7.76002463 3.34049106 10.25367414 9.86051483 12.13229954 11.75664964 9.00368768 10.57122647 3.87653659 10.64950706 -0.39649827 3.41087021 8.41730106 11.92863792 12.83283943 7.81459721 13.06299421 13.42196892 9.15938725 6.86717988 2.47798811 7.14267892 8.50338014 9.36673223 7.69803716 13.56674713 1.47798811 11.18063399 14.41584763 6.19846665 9.69451442 10.72008048 9.22312856 6.77010091 NA 13.49191783 7.86247867 1.82590771 7.94188509 0.34050530 5.28534303 9.87886846 10.21146662 10.34104897 11.79653181 10.29031220 10.02312905 3.14784395 11.07078577 10.13587586 5.88274330 8.46564068 4.78674271 11.39400414 14.47585810 8.16910424 11.31733595 11.29497265 6.97565999 2.77344783 7.19846665 8.81378536 9.23772599 11.00333182 -1.98165069 5.69098412 6.92845087 10.00297587 11.28167982 7.27830077 4.14784395 4.42794803 10.32917014 11.69814745 1.47798811 13.55492603 5.69803785 7.85460786 12.21669542 10.59645823 12.63780301 9.15362524 10.45292494 11.12348372 11.09226718 11.33271576 4.96107226 8.25576744 11.77605158 12.91706430 -0.39649827 10.08363688 8.99010084 0.01849175 3.41978157 9.88583606 10.26559477 9.86051483 8.85933537 14.89331065 9.95077210 9.83873641 8.44587027 4.46150237 16.12666320 8.64791383 13.35993721 12.85923698 10.26648485 9.78798204 8.74051105 11.05297635 -0.00622860 1.04620000 1.62710000 -0.01025700 -0.01422800 -0.00445160 0.04898600 -0.00258210 -0.00646000 -0.63632000 -0.63632000 0.00097064 0.00300300 0.00861350 0.02370600 3.21080000 0.00736090 -0.00207840 -0.01931400 -0.20242000 0.00500770 0.00110930 -0.01409000 -0.01959300 -0.01959300 -0.03204100 -0.03204100 -0.04155300 0.01698500 -0.01703000 -0.00622860 0.00972260 -0.01025700 0.00819590 -0.00277070 0.00000000 0.00000000 0.00392020 -0.00646000 -0.00262740 0.00013863 -0.00483550 -0.63632000 0.00255010 0.00255010 0.00255010 -0.03289200 0.00861350 0.00861350 0.02370600 -0.63916000 -0.00207840 -0.00758760 -0.00758760 -0.20124000 -0.00373950 0.02301100 -0.63169000 -0.01409000 -0.01959300 0.01398300 -0.03204100 -0.03204100 0.01373400 0.00376530 0.03087300 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 8.57889004 13.38063818 7.89507415 10.34076720 2.41088378 11.12446591 0.01849175 2.01856296 8.70768180 8.48412363 1.82590771 8.32347906 4.18848005 9.90920171 9.18534823 1.60350173 10.69208732 9.78425793 10.40091123 10.17274264 9.73565536 7.17842882 11.12757183 2.10601324 9.40926385 10.02312905 5.41943776 NA 10.78135463 3.94929213 13.09345145 11.86473332 8.88969256 10.71639370 7.97275353 9.34891401 5.07384165 1.47798811 -0.98136583 2.60352546 9.24917841 9.89584153 10.56134743 7.45526885 7.83592471 5.38487870 10.76675026 5.41087360 9.82752150 NA 11.70494850 2.54210944 4.69098132 9.88226750 5.42582517 3.01856296 9.22190535 8.95224794 5.93741973 0.01849175 14.01820513 2.26648673 10.28006467 NA 7.76339099 6.08464684 7.86561451 8.75749402 15.082588 4.588415 8.039537 13.062994 10.084505 11.293227 13.566747 12.651098 9.036062 10.689435 13.311670 10.169574 9.237726 11.830133 -1.981651 7.717262 11.742112 11.224045 8.430068 9.096708 9.064317 8.333707 10.561043 5.573147 6.317765 11.756650 5.633268 1.018563 9.136850 5.761708 10.865615 9.998340 7.878092 8.486163 12.216388 5.690984 10.341049 10.360354 11.639694 9.445346 10.708337 8.649734 1.018563 8.743617 7.786146 4.732801 11.281680 6.477990 10.585294 10.329170 7.404528 14.393121 10.100041 10.287099 12.489852 10.170842 9.860908 2.542109 TCGA-AN-A0FT 63 0 NA 183 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 56.63.0 6 3 4 NA 2 5 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.942656e-06 8.325669e-07 11.5302156 5.6265618 7.4528433 11.2348241 0.7317046 9.6074931 NA 8.0514162 10.6143869 8.1046087 9.8648860 6.9985306 9.4706804 9.4757367 7.4528433 9.2464577 8.6610020 11.0130943 7.0446269 3.1240634 10.9439361 10.6170588 14.2315274 9.6852127 8.3665548 10.4841244 5.3611016 10.4982727 1.3167250 4.0171469 6.9116532 9.3213949 12.0123696 7.4732106 17.5466579 13.3520209 9.1035205 4.5131054 NA 8.2115243 8.4799366 2.8191981 7.1663720 13.0696444 NA 12.3936332 13.7108117 NA 10.6344128 9.7582672 8.8045463 6.7924402 -1.2681217 12.7918241 13.2631862 1.3167250 7.7706626 NA 4.7541125 7.6654347 10.4160541 9.5204621 9.3510468 9.2805657 9.8396146 1.0536674 10.2245984 9.6543281 5.1240593 7.1411344 13.8391243 10.6307230 14.5983224 4.7496683 10.1165275 10.1569597 8.6960846 3.1911678 5.1746860 5.5519220 7.3353698 8.9725350 -0.2682954 6.1067838 6.1411344 10.3030224 10.4945410 6.2631246 5.0536718 4.2236002 10.8664910 11.5493271 5.1240593 13.4748426 7.3390741 7.4630625 10.9135172 13.0963573 12.1215096 8.6265614 10.7606859 10.8095609 10.0986288 9.9838178 2.0536674 9.6735250 11.2860928 9.8783124 0.3167250 9.5551110 9.2325857 1.9016875 2.9796778 9.2165667 11.3615558 10.2675051 8.0870947 15.0647943 9.5928307 10.0406517 8.2977976 2.6386299 15.1985531 9.8271409 11.8521437 10.6727914 9.6318559 9.8846623 6.6624818 10.0632206 1.2453000 1.7284000 1.4273000 0.0000000 0.0556190 -0.0241510 0.0387330 0.0425520 -0.0189950 -0.5573000 -1.0824000 1.2207000 0.0352030 0.0402880 -0.5525900 -0.4439700 -0.8017100 0.2231000 0.2231000 0.7065800 -0.0108220 -0.7859100 2.6235000 3.6569000 0.8084700 -0.4672000 0.6981500 -0.4775700 2.5299000 -0.4545000 -0.2334000 -0.2580900 0.0027365 -0.4955100 -0.0223700 -0.8061100 -0.8182100 0.0425520 -0.0189950 -0.0189950 0.7180500 -0.5183800 -0.5605000 0.1847600 0.2203300 -0.4976000 0.2106500 0.0514430 0.0514430 -0.5778300 -0.8017100 0.2231000 0.2231000 -0.2666400 0.8115400 -0.5084300 -0.7895300 0.0762390 -0.2153100 -0.2135800 0.0431180 -0.4777800 0.0996850 0.5071900 0.7472200 0.0110830 0.000 0.000 -0.778 -0.778 0.223 0.223 0.753 0.000 -0.537 0.000 0.000 -0.215 -0.215 0.000 0.000 -0.423 -0.423 0.921 0.921 0.000 0.000 0.747 0.000 -0.232 -0.232 -0.519 -0.519 -0.444 0.000 -0.806 -0.806 0.000 0.000 0.270 -0.448 0.657 1.214 0.211 0.211 0.165 0.000 0.000 -0.778 -0.778 0.223 0.223 0.753 0.000 -0.537 0.000 0.000 -0.215 -0.215 0.000 0.000 -0.423 -0.423 0.921 0.921 0.000 0.000 0.747 0.000 -0.232 -0.232 -0.519 -0.519 -0.444 0.000 -0.806 -0.806 0.000 0.000 0.270 -0.448 0.657 1.214 0.211 0.211 0.165 7.6446329 12.4910078 3.0536674 9.8005220 3.3628486 11.7958129 -1.2681217 NA 7.7679176 7.0936880 NA 7.1952679 2.3166961 10.8215253 8.8441832 -0.2682954 8.1283486 9.1993494 8.9190957 11.8603826 8.5189773 5.3899557 11.9100974 1.6596506 8.5455248 9.8396146 3.0536674 -0.2682954 11.5614665 1.0536674 12.5408085 12.6380707 8.4613644 11.4343494 7.5990224 11.3339787 4.4596611 3.2553043 -0.2682954 4.7090259 9.8706555 11.3386116 11.2484288 4.5390968 9.3709127 8.2977976 10.5717348 6.4999288 8.7720334 -1.2681217 10.1224501 -1.2681217 3.4866372 9.0795976 7.2965795 NA 9.0286600 8.2650735 5.3464535 0.3167250 14.3369050 1.7317480 10.3769519 -1.2681217 8.2728402 6.6975278 8.6595218 8.8827604 12.329457 4.316703 9.018301 17.546658 10.783041 11.282250 13.069644 10.689209 7.998530 9.932642 12.866892 9.708308 7.335370 7.683028 0.316725 7.076040 12.249536 10.781933 6.278639 8.921544 8.731744 7.239538 10.562897 6.293987 7.251380 9.685213 5.840269 -1.268122 9.610561 8.345147 9.634872 10.848737 8.151704 10.119761 6.513104 3.776136 9.520462 10.251871 10.144314 9.462214 10.684121 5.829776 8.895394 9.502482 7.488033 2.191184 10.494541 7.479936 10.768604 10.866491 7.035525 14.183760 10.246951 9.764478 11.881173 11.266776 9.817216 1.053667 TCGA-AN-A0FV 58 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 47.68.0 6 3 1 NA 1 5 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.769205e-06 7.284961e-07 12.6281003 1.6194130 6.4648986 11.1744775 0.2043912 9.4641148 NA 9.6327317 11.3541187 7.0074265 10.0176184 7.4648994 8.9547994 9.9322920 7.4804962 9.8385776 9.6658511 10.2605577 6.8861953 1.9413317 9.0540372 11.3709531 15.0310194 8.8264233 8.5187660 11.0119948 2.5262942 10.3937844 0.6193661 2.7893328 9.7986962 11.4694005 12.5669547 7.6881874 17.5444448 12.9130244 8.2632654 6.2341181 0.2043912 6.0951417 8.4427764 6.3336545 7.7615160 12.8899964 -1.3804461 9.9873698 12.6462783 2.4267746 9.7554004 11.0618342 9.3634020 6.4711582 -1.3804461 12.9453673 10.5770154 6.2632654 8.0202883 -1.3804461 3.4267612 9.8500301 10.0773030 9.8337282 11.0747363 10.0398956 9.9334258 4.0456701 10.9678606 9.4483389 6.0951417 8.1311619 12.0620934 8.3974864 15.1934112 8.5593997 11.0713928 10.8853170 7.6389998 0.9413317 6.1663037 8.2776208 8.9140299 10.7180991 0.2043912 7.0991889 7.5322983 8.6376092 10.6807802 7.2776203 4.6854973 4.9048116 10.5334204 11.6323827 5.9140287 14.3006200 5.3875935 7.7843162 11.1544414 14.4504193 12.6792605 7.7331509 10.8193881 10.9339923 9.9653687 10.5236673 4.8673381 8.7055453 11.3250415 8.3941960 1.2043912 10.5274264 9.5278017 3.1429688 2.1189245 9.9191894 11.1871275 10.4629376 9.1142647 15.6276188 10.3784650 9.5923888 6.8482273 4.1429688 13.7542765 10.7364028 11.9387989 10.2829671 9.9769610 9.7068719 8.7357530 10.2558343 -0.41487000 0.41932000 0.41201000 0.02146300 0.00000000 -0.41223000 0.00694350 -0.42287000 -0.41597000 -0.42582000 -0.42582000 0.01084200 -0.42615000 0.43634000 0.00597000 -0.44491000 3.65690000 -0.41245000 0.01950300 0.41597000 0.00541390 -0.42265000 0.38039000 3.65690000 0.41798000 -0.43333000 -0.43333000 -0.43333000 -0.01546600 -0.41970000 0.01014600 -0.00875150 0.02146300 -0.89350000 0.01237600 -0.41344000 -0.41344000 -0.42287000 -0.41597000 -0.43083000 0.00092013 -0.43076000 -0.42582000 -0.92025000 -0.42833000 0.40261000 0.40261000 -0.42331000 -0.43951000 0.00597000 -0.86105000 -0.41245000 0.01950300 0.01950300 0.00235810 -0.00047564 -0.42265000 0.41965000 -0.43680000 -0.44156000 -0.44502000 -0.43333000 -0.43333000 0.59062000 -0.42876000 0.41446000 -0.423 -0.423 -0.861 -0.861 -0.412 0.000 0.000 0.000 -0.423 0.407 0.000 -0.442 -0.442 -0.421 -0.421 -0.433 -0.433 0.000 0.412 0.591 0.000 -0.429 0.000 0.000 0.000 0.000 0.000 -0.858 -0.858 0.000 -0.411 -0.423 -0.423 0.000 0.000 -0.426 0.000 0.403 0.403 -0.259 -0.423 -0.423 -0.861 -0.861 -0.412 0.000 0.000 0.000 -0.423 0.407 0.000 -0.442 -0.442 -0.421 -0.421 -0.433 -0.433 0.000 0.412 0.591 0.000 -0.429 0.000 0.000 0.000 0.000 0.000 -0.858 -0.858 0.000 -0.411 -0.423 -0.423 0.000 0.000 -0.426 0.000 0.403 0.403 -0.259 8.2560336 14.1432773 5.2341181 9.7678857 2.4267746 11.2880725 0.2043912 NA 8.0870146 8.2953663 2.3198491 8.3353711 2.6194130 10.7253176 8.7918365 4.9048116 5.2193234 9.7415900 10.2891800 11.8518300 8.4285340 6.6908710 11.3293544 0.2043912 8.3250414 9.9334258 0.2043912 1.2043912 10.7075348 2.4267746 11.6299372 12.2723660 6.7993179 9.9111554 8.4056789 9.5981195 4.5736048 4.7486920 -1.3804461 NA 7.5142272 9.8172400 8.1112619 2.0788489 10.3127436 6.8385774 9.9475230 6.8530288 9.3650834 -0.3806339 9.5765112 2.4267746 3.0117282 9.5876798 8.3921525 0.9413317 8.2414608 7.4427760 2.6194130 2.7068620 13.5224907 0.2043912 11.2412320 NA 7.2377941 3.7068731 8.6052510 8.3826214 11.9829197 6.3473290 8.3353711 17.5444448 10.3721368 11.2751634 12.8899964 9.9648143 12.3759007 10.3447754 12.5168764 8.5779616 8.9140299 9.1272038 0.9413317 7.6194093 11.6393472 11.9171851 5.2193234 8.6760466 9.2811871 8.4411830 11.5145905 5.9413364 8.5005228 8.8264233 7.0031131 7.5938236 9.9260405 7.1296982 12.4621522 10.6955566 8.3284927 9.8590076 9.2524043 2.7893328 9.8337282 10.3289237 10.8533283 9.3224474 11.2435191 8.4601868 6.2847455 8.4693300 6.2632654 2.7068620 10.6807802 8.6137626 12.1385538 10.5334204 6.6250337 13.8068771 10.4011786 9.5427365 11.7883945 9.9884610 9.9977040 0.9413317 TCGA-AN-A0FW 67 0 NA 11 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 56.63.0 3 2 1 NA 2 1 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 1.668684e-06 4.171709e-07 11.6082358 7.6590754 6.8349248 12.0109691 0.6411761 9.4542935 2.1265765 9.6899129 12.1415972 8.7083190 9.6172882 7.5504467 9.5353652 9.2276181 5.8661192 9.1030423 10.4635651 10.2832054 6.5528458 4.5671560 9.7158304 8.9711742 14.4605145 11.0388283 9.2617400 11.2110093 5.7370783 10.0745179 -1.6808445 0.3192711 8.0724424 10.4654760 13.4639635 6.2321158 11.5540430 14.0596388 8.4106608 5.3960396 1.9041950 5.7786580 8.2110093 10.0347587 6.2200919 13.1812817 NA 10.3778939 13.2766904 1.9041950 9.0964809 11.0898894 9.8354181 10.5968036 4.7621681 13.5317828 11.3251588 0.9041950 7.2763273 -0.6808445 3.4485046 9.5371833 10.1694125 9.8486561 9.8457248 10.2075884 9.5848406 5.2617414 11.0096601 10.3419402 6.8309778 8.6264264 6.1895894 12.1546839 14.8153147 9.0327753 11.4783085 10.9756505 7.8852797 -0.6808445 5.1772082 6.4433464 9.2170710 11.5871826 -1.6808445 4.7286171 7.6069381 8.9522209 10.8336931 3.7786607 4.8270213 4.0196663 11.0006836 12.4320723 3.9339314 14.2123612 4.6230065 7.0471457 11.4924342 11.0430998 12.6608834 7.7201047 10.6121224 10.3443652 10.4073513 11.5838148 5.1005867 9.2477438 12.3848941 9.1362091 -1.6808445 10.1314029 9.1584294 1.4891319 3.0805042 9.9823389 10.8063119 10.2189601 9.6546160 14.9415491 9.7126161 10.5531448 8.3304526 0.9041950 15.7840345 8.6657392 11.7647578 10.5453366 10.5519463 9.6817174 8.7496781 11.2951452 1.7208000 1.7128000 1.7128000 -0.1223900 0.3140200 -0.1742400 0.0072217 0.2831100 -0.0963080 0.3303900 0.3303900 0.3244700 -0.5521600 -1.0168000 -0.0912870 2.7823000 -0.5509600 0.2978700 0.3055300 0.3473000 0.3002600 0.3567500 -0.0768120 -0.5983800 2.6512000 -0.1830700 0.2183700 0.2183700 0.6827300 -0.1397500 -0.0964400 0.4153000 0.3357700 0.2381400 0.1740700 0.0072217 0.0072217 0.2831100 -1.0234000 0.3194800 0.2535500 -0.1035500 0.3512000 -0.1105100 -0.1068400 -0.1068400 -0.1162600 -0.5386500 -0.5376300 -0.1125300 -0.5556700 0.2978700 0.3095300 0.2924700 0.3401500 0.3002600 -0.5521600 -0.6049700 -0.0768120 -0.5983800 -0.5335800 0.2009100 0.2183700 -0.0948560 -0.0985500 -0.1238200 -0.539 -0.539 -0.113 -0.513 0.298 0.298 0.340 0.300 -0.195 0.699 0.000 -0.143 -0.143 -0.528 -0.528 0.218 0.218 0.000 1.713 0.683 0.683 0.000 -0.124 -0.111 -0.111 0.336 0.336 -0.180 -0.180 0.000 0.000 0.283 0.000 0.319 0.319 0.330 0.330 -0.107 -0.107 0.000 -0.539 -0.539 -0.113 -0.513 0.298 0.298 0.340 0.300 -0.195 0.699 0.000 -0.143 -0.143 -0.528 -0.528 0.218 0.218 0.000 1.713 0.683 0.683 0.000 -0.124 -0.111 -0.111 0.336 0.336 -0.180 -0.180 0.000 0.000 0.283 0.000 0.319 0.319 0.330 0.330 -0.107 -0.107 0.000 8.2922052 12.5671531 4.2734189 9.0724424 3.4827192 10.9785526 2.0196663 -0.6808445 8.8359105 9.1273854 -0.6808445 7.4277503 4.0196663 10.1322050 8.6778768 -0.6808445 8.3443652 9.4459301 6.9004261 9.3980435 10.8338632 7.6252873 10.7040093 0.9041950 9.0505447 9.5848406 4.9630810 1.7786712 12.2716028 2.9630857 12.5807329 12.5643326 7.9987055 9.9476711 7.0403248 9.8467025 4.0196663 0.9041950 -0.6808445 4.9339361 8.8388620 9.9867807 10.4661124 7.1103883 7.9619092 5.4485079 10.5962223 4.2499610 11.8367720 0.3192711 11.0458695 3.0196663 3.6767752 9.7518458 7.3711145 3.5286838 8.8290006 8.2484841 8.0890632 2.7115390 14.0999704 -0.6808445 11.2110093 NA 8.2806752 4.8890792 8.0539351 8.9585663 14.05008494 5.73707830 8.11038830 11.55404299 10.49446321 10.76760001 13.18128170 14.40166572 8.58601221 10.99054550 14.03733028 10.65321949 9.21707097 9.37450810 -0.09588204 9.09976543 11.77699121 11.1314029 6.5623997 8.7683742 9.8265247 7.5504467 10.6032312 5.6767780 10.3509268 11.0388283 6.6986033 6.5999961 4.3192277 7.5699505 9.7496781 10.3636197 8.6405786 9.8025375 11.8162042 5.2261154 9.8486561 11.4762567 11.0905087 9.4600553 10.7441792 9.0411792 NA 8.8768902 5.9620724 4.9916488 10.8336931 6.6456556 10.6088382 11.0006836 8.1038606 14.0320481 10.5941860 9.9639831 11.8897929 10.9214605 9.3415933 0.3192711 TCGA-AN-A0FX 52 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 4 NA 3 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 2.289559e-06 4.509738e-07 12.13913108 6.85138051 6.70908657 12.46714725 0.35151526 10.12961171 NA 9.74116594 11.54736813 9.27486196 9.95376940 8.33310167 9.25089148 9.57251739 6.43899806 8.88486437 10.07690082 10.77937120 7.98634551 3.15888634 10.80763224 11.72126819 12.52443079 10.90468384 9.75507918 10.83836959 4.82727029 11.27690354 7.19388507 0.93651545 7.55854852 13.20800871 12.85262532 6.75667640 12.24833995 10.91496919 10.61245405 6.29404907 2.87509197 9.31081202 9.22574753 10.81070995 8.55976902 7.54135918 1.81097772 12.65195863 9.87852274 9.93602731 9.05886790 11.57115686 9.21262138 7.70908657 NA 13.59841281 10.27931249 3.25842847 8.12632142 0.35151526 4.70908657 10.27114282 10.32738254 9.08709045 10.15566563 9.25013590 10.38392468 8.35575499 11.08539730 11.53826786 6.98453011 7.27337508 5.44956798 7.56585380 15.84627297 8.13010460 10.79006653 10.63520170 8.26890687 1.35151526 3.93649661 8.81199050 9.57854875 10.71457421 NA 5.98089130 6.46005938 11.38013131 10.20250270 5.17171524 6.63693632 4.65531748 8.83030413 12.07988027 -0.64837167 13.07370169 5.52145911 7.48081766 12.45899685 13.62245035 13.05916330 7.57070275 11.20230739 11.05954071 11.18161792 11.35540379 4.87509688 7.95144734 11.97621579 10.45678829 -0.06355993 10.40952629 9.69749410 2.67346597 6.65622748 10.44396142 11.51502702 11.58425526 8.75880218 14.77448628 10.48049547 9.67684002 8.70688552 3.25842847 11.87693300 9.52271138 12.75601091 12.13371375 10.17450367 9.98725264 8.13289450 10.69109233 0.0276380 1.2391000 0.6124400 0.3651000 0.6866300 -0.3894000 0.8922700 0.3870000 0.0070826 1.0375000 0.3209300 2.9444000 0.0000000 0.0000000 -0.0373540 -0.0576540 0.3386900 0.0140510 0.0169000 1.6871000 -0.3711000 -0.3147100 -0.3606800 -0.3606800 0.0420240 0.2621600 0.9348800 0.2604300 -0.0168410 0.0365120 0.6983900 0.3172700 -0.3931900 -0.3990800 -0.0708040 -0.4142100 -0.4305700 -0.7901700 -0.3919600 -0.4055000 -0.0587310 -0.0286440 -0.3798800 0.4139600 0.4139600 0.4139600 0.3047300 -0.4044000 -0.0264410 0.2059500 -0.7605200 0.4563200 0.3843600 0.0051359 -1.0509000 -0.3711000 -0.3665800 0.0272160 -0.3630600 0.0420240 -0.0167040 0.2621600 0.2604300 0.7113300 -0.0452280 0.3333500 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.089 0.452 0.414 0.305 0.139 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.089 0.452 0.414 0.305 0.139 8.3835803 13.8011669 5.0380366 10.0815801 3.2874723 12.4468492 2.0519637 3.9364966 9.0424055 10.1394371 7.6958303 10.2319369 6.5899387 9.7008158 9.5006465 4.3739057 7.8027458 10.1946704 8.4041027 7.8272677 8.7612966 7.8848641 11.4164457 2.0519637 8.7924038 10.3839247 4.1064237 NA 10.7352388 3.5214654 11.7160796 12.4383342 7.1097575 9.9994427 8.8711709 10.3437648 6.9625594 2.1588863 -1.6483717 1.3515153 8.7725475 9.0007907 8.1378042 5.5609870 10.1303591 6.5947083 9.7929225 7.5875488 9.7265739 0.3515153 12.9300252 2.1588863 4.3288149 9.5632342 6.9491777 4.8109674 9.8418840 7.3345281 7.0828537 8.5707031 13.1144875 -0.6483717 11.4950772 -1.6483717 5.8109674 5.0930023 8.2881726 8.8770552 11.0658874 9.5609879 7.6018332 12.2483399 11.1329844 10.9540015 7.5413592 11.7968081 9.5047129 11.0184243 12.7209956 11.8866884 9.5785487 8.1394373 0.3515153 8.1491958 10.2782012 11.894566 5.093002 8.410879 9.651315 7.264424 10.790721 5.743852 5.980891 10.904684 9.322359 5.980891 9.987253 9.109583 13.597050 10.607153 7.266219 10.106005 9.498103 6.058894 9.087090 10.285594 11.617296 11.003483 11.061265 8.065780 7.252401 9.053387 7.842465 6.246353 10.202503 6.902281 11.072967 8.830304 7.829495 14.782493 9.959327 9.307911 12.932146 11.819395 10.296247 1.158919 TCGA-AN-A0FY 55 0 NA 10 breast stage ib t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 1 4 NA 1 1 1 1 1 2 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.24885e-06 1.387612e-07 12.5972987 5.2823249 8.5445167 11.6990545 1.2923695 8.9850894 NA 9.6342046 12.0909389 11.8819242 9.7908939 7.0020352 8.6123002 10.3070175 5.8639186 8.4170727 10.9999279 10.8613888 7.3221246 3.3703736 11.6595491 9.8727403 14.3040314 11.4183644 10.2498016 11.1025916 4.8366967 10.3300766 -0.8775261 0.4443490 7.6302467 10.5920939 12.4573538 7.6770409 11.9644095 12.7089400 9.8198540 5.5981865 1.9297910 8.6538336 8.4101643 8.0142359 7.4578421 12.9935872 2.9804275 9.4466326 13.8152855 3.5818815 9.6674166 10.9636232 6.3416211 4.5818815 1.1224739 13.2181940 8.4147736 2.1224408 7.7353204 1.4444020 3.0293469 9.6674166 10.0766483 8.9249683 10.9476096 10.1743407 9.2810618 NA 10.7902289 10.4717333 6.0590892 6.6770402 6.2973785 11.7395751 14.8828991 7.3161249 11.0864318 10.5289228 8.2491566 2.9804275 -0.8775261 8.2961293 9.1434319 10.2171895 NA 6.5529042 7.4996625 11.9174770 10.4731151 8.4985776 5.3798393 5.3319058 8.6072748 12.1723857 1.5818815 13.4379915 5.4974910 7.7445036 12.0219034 12.9428305 12.7257307 6.7149090 10.2112403 11.7420989 11.0867659 12.0250156 4.9168683 9.2231143 11.5455679 12.5714717 0.4443490 10.4055404 9.9119857 0.4443490 3.5624134 9.4296528 11.9104566 10.9121894 10.8080769 15.2167050 10.7799938 10.6087843 8.9346294 4.7806618 15.0830197 7.7390008 12.2031030 11.5937462 10.3810181 9.8580080 8.3245757 9.8987782 0.343230 0.343230 0.343230 -0.055061 -0.056038 0.389820 0.672150 0.371170 0.371170 0.421500 0.421500 1.179900 0.000000 -0.011321 1.734700 0.526780 0.526780 0.354470 0.354470 0.765610 0.806550 -0.534620 -0.507430 -0.508350 0.339180 -0.492870 1.843500 1.239300 3.656900 0.353370 0.343230 -0.049019 -0.058952 0.320440 -0.130180 -0.153240 -0.153240 0.371170 0.371170 0.371170 -0.345150 -0.346890 -1.078500 0.725670 1.754400 -0.494540 -0.041431 -0.011321 -0.066489 0.767530 0.693670 0.354470 -0.098023 -0.061958 -0.538960 -0.041567 -0.519180 0.386260 -0.547030 -0.508350 0.810310 -0.469610 0.202740 -0.110510 -0.485960 -0.519690 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.155 1.147 0.000 0.000 0.144 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.155 1.147 0.000 0.000 0.144 8.6032421 14.1418256 9.4432525 9.9322202 3.7663089 11.4835734 -0.2926519 1.1224739 8.6133029 9.1865211 7.5275935 8.1486433 8.5910761 10.5826520 8.8228917 6.4623027 7.1586258 9.5376657 8.2059315 10.5233315 9.4270373 8.6052599 11.1116691 0.9297910 8.4832991 9.2810618 4.6460128 NA 9.9095384 3.0293469 12.9301591 11.9459188 7.7645041 10.1465528 8.0517103 9.6247867 7.4147740 0.7074364 -0.8775261 7.4101647 9.1224519 9.6693464 9.1343781 3.9038096 5.9905964 6.7334764 10.0383314 6.8840032 9.8980623 -0.8775261 10.9285988 3.7948733 3.8503694 9.0977483 5.7363532 1.1224739 8.5685015 7.3245757 2.5147787 0.9297910 14.0755799 -1.8777911 11.3032936 NA 8.8435511 3.7948733 8.2886151 7.0678957 12.805432 7.963230 7.751808 11.964409 10.392455 10.532108 12.993587 12.035061 9.942132 11.048007 12.426447 11.951679 9.143432 8.489867 5.488775 8.135077 12.386015 11.1959242 7.5841771 9.1790898 9.9577130 8.5920937 10.8500790 6.0997328 9.7060050 11.4183644 9.5570803 0.1224739 6.1054455 9.7822919 11.9420324 9.9418329 9.0353413 10.8552554 9.6533460 4.0050945 8.9249683 10.3060874 11.5822678 9.3017392 10.5648772 9.3578680 0.1224739 9.6250502 6.8266667 2.2923695 10.4731151 8.2543092 10.4502853 8.6072748 8.2633711 14.1782005 10.4353350 10.5241316 11.8987823 11.0125263 10.2102464 1.8228933 TCGA-AN-A0FZ 45 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 56.63.0 3 1 4 NA 2 4 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.00121e-06 1.946798e-07 11.389281781 6.133347746 6.913108418 11.508325050 0.816558749 9.758677109 1.916132650 9.855892240 11.942271763 8.965602782 9.998975943 6.616557665 9.160877341 10.108574375 6.656685133 8.992220066 10.612157385 10.318418757 6.819798449 1.179128829 11.022374818 9.160877341 15.145256472 10.661175246 8.872638562 10.806685508 3.294635451 10.752586289 -0.990796173 -0.990796173 7.728615775 10.502081228 12.790022672 7.308434600 13.653674419 13.515658178 7.772439289 3.764112567 1.709687653 5.829405624 8.625775315 11.582755491 7.075315483 12.697094343 2.653082953 11.057032201 14.231549853 0.331131922 9.002872666 11.648454253 8.056350502 4.963423259 -1.990796173 11.895710079 8.685183642 0.009203827 8.850004575 -0.405833672 4.501082408 9.978972808 9.619790069 9.077333004 9.977173292 10.333407185 9.202751957 4.218680439 11.224759614 10.164677309 5.873412121 8.156431506 2.764112567 10.746051291 14.209512225 9.434437246 10.746473928 11.505331386 8.053620753 0.816558749 6.169097218 6.559973549 9.350745410 9.554673838 -0.990796173 7.067218142 7.885743344 8.913861182 10.414368125 4.276012708 3.816579228 3.257161520 10.470194371 11.991061435 3.939959965 13.150615349 5.208899576 7.301548323 12.696547628 13.017523922 12.956635267 8.582873966 10.672562356 10.520237971 10.023100627 11.144294592 4.638583615 9.213186379 12.432079814 10.707714240 NA 10.311579972 10.057372828 -1.990796173 2.180752571 9.060435467 10.241047775 10.674784587 9.698350981 15.346125392 10.779064495 11.161828366 5.873412121 0.331131922 15.348815696 3.867204595 11.897399082 9.828208220 9.858631771 9.545959491 8.483946742 10.524416441 2.282200 0.451900 0.451900 0.239690 0.137610 0.075259 -0.612580 -0.068665 -0.121040 0.930400 0.808110 1.984900 1.287600 -0.607290 -0.630930 -0.586180 3.656900 0.177840 3.656900 0.440120 1.672100 -0.183700 -0.838570 0.488200 0.488200 -0.312950 -0.328090 -0.328090 3.432400 0.028481 0.092025 -0.135100 -0.577430 0.108910 0.052852 -0.647800 -0.653610 -0.068665 -0.111420 -0.121040 -0.383920 -0.299920 -0.938870 -0.206850 -0.206850 -0.206850 -0.206850 -0.607290 -0.607290 -0.360010 -0.627280 0.177840 -0.410640 -0.368500 0.458200 0.052810 -0.183700 -0.473530 -0.838570 0.488200 -0.614790 -0.312950 -0.328090 0.245750 -0.385820 -0.552560 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 1.046 1.985 -0.207 -0.207 0.000 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 1.046 1.985 -0.207 -0.207 0.000 7.530826891 13.834259924 4.031598105 9.289417445 -0.434987819 10.340423516 -0.990796173 -0.990796173 8.334532076 7.662071594 NA 8.050721524 -0.405833672 10.645624661 9.341822786 4.031598105 6.671004578 8.961967930 7.867207684 10.843302554 10.024798509 7.301548323 11.400470206 1.468635446 8.490016900 9.202751957 1.009203827 5.517020522 11.245390364 0.594166328 12.084455044 12.443919990 7.735445004 10.090044122 6.977893511 8.903286574 8.336779229 0.009203827 -0.405833672 0.331131922 8.769946579 9.126869638 10.316427378 3.053615323 10.422113977 6.096689858 9.659829679 5.797129738 10.237744746 NA 9.622095210 1.594166328 4.331153425 9.548947681 5.169099223 NA 9.521967054 7.561895830 3.963418635 -0.405833672 13.687881774 -1.990796173 11.097352303 NA 5.418618374 5.238045454 7.755740844 7.317565468 12.738210 5.764115 8.590427 13.653674 10.419227 9.997556 12.697094 13.628702 11.496871 10.843105 12.266099 10.059756 9.350745 8.409039 1.709688 7.759096 13.437914 10.7570000 6.3842657 9.6891464 8.6063482 8.7515360 10.6202376 5.1177491 8.6930984 10.6611752 5.8918687 4.3490751 8.6230160 8.2864210 10.5018309 9.6873865 7.4143681 8.9757322 11.3401435 2.1791607 9.0773330 10.2885471 12.1975836 10.1046236 10.4090386 9.4809019 2.5327907 8.9596731 5.8165818 2.0092397 10.4143681 7.4563101 10.5333814 10.4701944 7.7150319 13.3662631 10.2786455 9.8953041 12.1396363 9.7443596 9.8815167 0.5941663 TCGA-AN-A0G0 56 0 NA 16 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 NA NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 7.230962e-07 8.343418e-08 12.7467268 3.3587760 7.0239040 11.0295790 -1.7705351 10.1709025 NA 9.4528866 12.2681499 7.4193130 9.8224123 7.9351203 7.8769466 9.5315557 8.6131924 9.1044693 8.8200752 10.6276973 8.9633507 2.3994172 10.3623091 11.3027928 13.3726321 10.3763749 10.5598448 10.7125481 4.8144530 10.4118793 -1.7705351 NA 7.0623776 12.3734292 12.3183591 6.0812374 12.5567600 13.4826708 10.9249339 6.1243054 2.8733408 4.3587690 9.5321270 7.6661999 5.6970927 10.3664792 NA 9.7233435 9.6878948 3.5148923 8.7362917 10.8446579 8.4559001 2.4774183 -1.7705351 13.2258040 7.9471302 0.8144274 8.7598945 NA 5.0874671 8.3906200 9.7183323 9.1423774 9.8186710 10.0038633 10.0050983 7.3327759 11.7867124 10.3419276 7.1690671 7.5079373 9.6404693 8.9935303 15.6977700 7.6449976 11.2236647 11.6835303 11.5648784 0.5513930 -1.7705351 9.7797538 9.0239040 11.0506641 -1.7705351 5.0368418 6.2629104 10.3805046 11.1874970 5.0108470 5.2518554 5.7052204 9.8583892 11.9256949 1.0368198 12.5779396 2.3994172 6.4631074 11.4120376 12.4423644 12.8272497 8.4821533 12.1084011 11.2854483 11.0355120 11.5740614 4.9159893 8.8303301 11.4663992 5.6473404 -1.7705351 9.6309009 10.0800656 5.0998548 3.0904470 11.0708559 8.7273399 9.6325002 8.9420150 14.5407574 9.9142367 9.9484490 7.1923846 -1.7705351 13.9107265 3.4389448 12.6624214 10.4186949 10.1945508 9.9620795 7.6388790 10.7798934 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.9743217 13.3916040 6.5469006 9.4149830 1.6889412 11.3409498 -0.1855726 -0.7705351 9.1639161 6.7647628 NA 7.2361510 1.8144684 11.0263388 9.3912498 2.3169567 5.2955761 12.0422670 10.1010084 9.3683997 9.9522316 7.3169512 12.5259741 2.3169567 9.4248602 10.0050983 0.2294649 NA 10.0544468 6.3587707 13.2690497 13.2630401 7.2546281 9.9654671 8.4031650 9.5974489 4.7052204 1.2294649 0.2294649 NA 8.5137339 9.6950544 7.8125707 -0.1855726 9.3581397 5.8877007 9.3581268 7.7372825 9.9976723 3.9843797 11.5570407 0.2294649 5.1363801 9.5622630 6.4612371 6.3893586 8.8312588 7.8983728 7.7725198 NA 13.4134335 NA 10.8347361 NA 12.0647490 7.3380125 7.4118821 7.5782164 12.260069 7.356192 8.795542 12.556760 9.190279 11.447900 10.366479 11.476822 13.139519 10.730330 12.758308 10.733065 9.023904 8.431612 1.229465 7.409397 11.396122 10.846726 5.399414 8.502118 9.166126 9.771553 9.398248 5.638879 3.621806 10.376375 1.814468 5.894825 10.058814 9.649206 13.977681 9.587590 9.134123 8.971798 9.214619 6.887700 9.142377 9.618582 12.001390 10.247688 10.285787 10.465203 NA 10.368294 8.666335 7.139381 11.187497 6.912482 10.050864 9.858389 8.598158 13.641462 10.199953 10.794590 12.802425 11.852684 9.645758 1.814468 TCGA-AN-A0XL 61 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 80.55.0 8 2 1 2 NA NA 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 10.4995128 9.5651343 7.9219909 11.4640194 2.1671010 10.4130520 1.1671010 9.9728471 11.8823503 12.7846472 9.8454099 8.7891551 9.3345213 9.6873946 8.5187786 9.2439189 10.1787964 9.4501916 8.1801931 3.2259998 10.9322512 9.5039817 12.9752630 11.2554498 9.2920862 10.4803642 4.6045102 10.5139826 2.1671010 2.9744559 9.4070995 12.2146816 12.4252767 8.2825807 13.3952204 14.1427721 9.2430280 5.5363358 -0.4179258 7.4432279 9.0094536 9.1903956 8.0084057 12.7217720 1.1671010 9.8359882 12.6317341 3.3894980 9.0545270 10.9099741 10.0543239 6.8859221 NA 12.4824934 8.8157605 3.9040698 7.2791082 -1.4177330 4.7520635 9.9973544 10.3164269 9.0456652 11.5299603 10.2899313 9.8151612 4.6906629 11.4393442 9.7976737 6.3700439 7.7420123 5.1519968 11.3176968 14.7535130 9.0421973 10.9620606 11.0797431 7.9701582 2.2825881 0.1671010 7.1820536 9.6755584 11.6760534 NA 5.2686402 6.6589569 10.6539382 11.4884677 6.7114233 4.7915953 4.3635005 10.1140095 11.9435363 3.4890291 13.3291798 5.9658443 7.5679827 12.1515217 11.1713237 12.7878576 8.1348098 10.2825804 10.9468226 10.7887308 11.1198445 5.0084062 8.7964599 12.3841521 9.4174017 -1.4177330 10.1076616 9.7069083 2.2825881 3.1391911 9.9701580 9.7946371 9.8365789 9.4362299 14.8366158 10.2699538 10.7236093 8.6958828 4.1671010 15.8681750 9.6808308 13.0285779 12.5492769 9.8483416 9.5672711 8.1309628 10.5884878 -0.00401620 0.78273000 0.51126000 -0.00373950 0.49573000 -0.00415460 0.80986000 -0.00857660 -0.00857660 -0.46929000 -0.00650500 0.81103000 0.00000000 0.00000000 0.40111000 0.40111000 -0.46142000 -0.01023200 -0.01340200 -0.45811000 -0.00581400 0.00000000 -0.46515000 0.40611000 0.40611000 -0.02013800 -0.02013800 -0.02013800 0.41881000 -0.00401620 -0.00401620 0.00027728 -0.00373950 -0.00415460 0.00000000 0.80908000 -0.00539920 -0.00857660 -0.00857660 -0.00857660 0.41580000 0.41580000 -0.46334000 -0.00069303 -0.00069303 -0.00069303 -0.00069303 0.00000000 0.00000000 0.40111000 -0.46142000 -0.01023200 -0.01340200 -0.01340200 -0.45811000 -0.00581400 0.00000000 -0.47259000 -0.46515000 0.40611000 0.00819590 -0.02013800 -0.02013800 0.41881000 -0.00543130 -0.00235530 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.133 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.133 8.7101352 12.2209160 5.1213014 10.0052567 1.9040794 10.7611168 -0.4179258 1.5821224 9.0094536 8.9915318 NA 8.8400471 5.5363358 9.8241239 9.5069532 2.5821465 10.7492452 9.7558179 9.6265348 10.0624260 9.9448298 8.3100610 12.6313086 2.0415584 8.3049481 9.8151612 5.2114990 NA 10.7851828 2.9040601 12.2787823 12.3765566 9.7657761 10.2817132 7.7818128 8.7928121 5.4525065 1.7520635 -1.4177330 7.9999932 8.4799863 9.6636241 10.9023771 6.8157599 8.1563749 5.5821405 9.5128781 6.7165671 9.8916171 1.1671010 11.5576305 3.1056948 4.5821405 9.9166655 6.9611730 0.5821706 9.5572722 10.2367767 6.2895007 -1.4177330 13.6350059 1.1671010 9.8927535 NA 6.9175308 6.6100474 7.5450370 7.9440848 13.622191 4.337026 8.816958 13.395220 9.966924 9.937492 12.721772 12.630883 8.391105 10.779050 13.793763 11.435060 9.675558 8.236777 1.167101 8.180193 11.245476 11.1386468 6.3830407 8.8640707 8.4070995 9.0799927 10.5488156 5.7318892 6.5305078 11.2554498 6.1968509 4.3370260 7.5594207 6.4058256 10.9525557 9.9962974 8.3083591 8.6854286 11.5565553 5.0899345 9.0456652 10.5128781 10.8568100 10.4924087 10.5279503 8.5651345 -1.4177330 8.9778354 8.6665372 3.8300727 11.4884677 6.0167682 10.4946559 10.1140095 7.3830407 13.6210169 9.6121180 10.0619210 12.6420766 10.4939072 9.7854888 0.9040409 TCGA-AN-A0XN 68 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 1 3 4 3 3 2 2 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 2.948675e-06 7.631864e-07 11.9562306 2.4540443 6.1942723 11.3162463 0.9945797 10.0833882 NA 10.0860354 11.1089931 6.6670249 9.8886599 7.6129857 9.0211235 10.3018008 5.5795633 8.6166518 9.4208647 10.4045213 8.8757140 3.2425263 9.6828503 10.5506270 12.2836102 10.2666465 10.1899723 10.4530067 5.0169687 10.6375543 NA NA 9.4683057 11.8085816 12.9371145 9.3344501 11.3650150 11.9996982 10.4013365 5.9487971 2.4540443 7.6563784 8.8999870 9.7208181 8.6617115 11.5337588 NA 11.8263031 12.2772541 4.4864505 9.2960962 10.1050834 8.0058272 4.9487971 0.9945797 14.3187021 9.6248671 2.9014945 9.0754176 2.1645289 4.6950417 9.4814350 10.1238830 9.6863435 10.6701161 9.9223779 9.8924455 2.5795664 10.9988205 9.9127178 5.2234187 7.8369504 NA 10.4182412 15.7209645 9.0082717 11.1395769 11.8488840 8.7019593 3.5795664 3.9487971 9.7825026 9.6000796 10.6915676 NA 8.2425277 6.9487959 10.0410420 11.4287069 6.1844251 7.4944460 5.7360663 10.3422214 11.6184815 -1.0054927 13.7532397 3.6950362 6.9429672 12.5042513 13.6751244 13.2280699 8.3847691 10.5534990 11.5009076 10.7707780 11.2285192 3.9945978 8.1264572 12.6594917 10.6023927 -1.0054927 10.6661411 9.7088456 -1.0054927 2.9955026 9.7259190 10.8871428 9.9675798 9.4124526 15.1817394 10.0559712 9.9319739 6.9487959 5.4208664 14.3907365 8.8463491 13.7874411 11.6985036 9.9868303 9.2742106 8.3783044 9.7045540 0.0162860 0.5189100 1.2616000 0.6092100 0.2993100 -0.0900270 1.3683000 0.1807100 3.3893000 3.6569000 3.5500000 0.9150100 0.3938000 0.7629300 -0.0019399 0.5020300 0.3573800 -0.3428500 -0.0179410 -0.3395200 0.6137100 -0.3332900 -0.2946100 0.0246890 0.0246890 0.3492500 0.0479780 0.0199230 0.6542400 0.0210430 0.0162860 0.5016800 -0.1015800 -0.3927400 -0.0344950 0.3565900 -0.7766000 0.1807100 0.3063300 -0.3783100 0.0715350 -0.3863800 -0.4165200 -0.4999600 -0.3774100 -0.0322200 -0.3280900 -0.3986400 -0.3436600 -0.7240300 -0.2995700 -0.3581800 -0.0179410 -0.3498500 -0.2434600 -0.3524800 -0.3368400 -0.3096800 -0.2946100 0.0246890 -0.3971900 0.3492500 -0.0142280 0.0198290 0.1177000 0.1090600 -0.344 -0.344 0.000 0.000 -0.340 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.340 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 9.681100462 14.970336049 8.307483172 10.205879980 NA 10.015579942 -1.005492684 -1.005492684 8.176994391 9.200393267 NA 9.338052194 4.722520671 10.573915916 8.798730993 2.316522300 8.014190682 9.567300156 9.112243224 8.729309740 8.830224262 7.213768168 11.953877522 3.518157421 7.649236055 9.892445521 0.579566360 NA 10.189972279 3.386921282 12.731424705 12.328733599 7.433391817 10.373436694 9.801149600 8.846349140 5.994600088 3.518157421 NA 2.994597826 8.022505972 8.358734706 8.877243023 2.579566360 6.941915017 6.977593618 8.679348492 7.677594920 9.469319871 0.579566360 10.172642397 4.801955334 4.082063861 10.058911723 5.734717748 -0.005347871 10.121304533 9.218601740 2.164528861 -1.005492684 13.839256746 -1.005492684 10.343328201 NA 10.308050007 4.242526292 8.585187153 8.861878775 13.040871 6.184425 8.057995 11.365015 9.741954 10.942237 11.533759 11.921822 9.416665 10.721670 13.006875 10.907115 9.600080 8.682850 -1.005493 7.352152 11.191202 11.058669 6.729309 9.129026 8.506353 8.167028 9.675452 6.736066 3.994598 10.266646 7.334450 4.454031 7.466276 7.261667 12.812583 10.375602 7.970820 7.425052 12.762060 4.123881 9.686343 10.222817 10.570139 10.221012 10.451981 9.291516 5.316530 8.924909 7.852581 3.695036 11.428707 10.500412 10.082726 10.342221 7.656378 14.170695 10.188125 10.421389 12.831341 10.732692 9.553021 NA TCGA-AN-A0XO 59 0 NA 375 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 74.60.0 5 3 3 3 2 1 1 2 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.39057e-07 10.9333302 5.0922370 7.0023312 10.7982156 -0.8147677 9.5888917 NA 10.2531174 12.3211365 8.3813344 9.5603865 7.5798100 8.9435703 9.4919783 7.3068801 9.1190376 10.6129217 9.4666975 7.4427345 1.5072619 10.0679901 9.7186767 13.3208559 11.3544891 9.8233303 10.7339282 2.9402419 10.2011105 NA -0.2297207 7.0862137 12.1091387 13.6660741 7.8753451 13.3475417 13.6347537 9.9687546 6.5776645 4.2297417 6.7128241 8.4380125 9.8165240 8.8018959 13.3433650 3.0922413 10.8408777 13.6366548 7.9064463 9.3675862 11.7260805 6.8788344 6.6406744 NA 14.0027522 8.1219852 1.6447792 7.0433281 -1.8145140 4.0922413 9.9568366 10.5655375 9.4093487 12.5040311 10.2684939 9.6000322 4.9927005 11.4772372 10.0664610 7.4427345 8.0166545 3.2297417 11.6137072 14.9078478 8.5440313 10.8289778 11.2087549 9.5362863 2.3552700 5.1965756 9.2433387 9.4129629 12.6755712 NA 6.2406292 7.0710429 9.7089090 11.8964762 5.3850203 3.5776584 4.2514389 9.8137926 12.4198651 1.7703216 13.8069983 5.9064457 6.8892508 12.8150452 14.5395620 12.8029867 8.4201645 10.9785439 11.4129630 11.0351665 11.3317566 5.3042883 8.7322414 13.6524431 12.2069343 1.3552982 10.5010627 8.9568364 -0.2297207 2.1862470 9.5179431 10.2321300 9.4620531 9.4087454 14.7725239 9.8480154 9.9435702 8.5439981 4.5947396 15.5018054 10.7235360 13.5296083 11.5717485 10.4681460 9.7089090 8.7599404 10.7962334 -0.6267600 0.5607800 1.1737000 0.1716400 0.7696100 0.0109610 0.5766300 -0.0220790 -0.0220790 1.1558000 0.1755600 0.3724600 -0.0579440 -0.0579440 -0.0510660 -0.0510660 -0.0510660 0.2192700 0.2192700 0.2073000 0.0459700 -0.1079000 0.0811560 0.0811560 0.0811560 -0.0231750 -0.0231750 -0.0231750 0.1042200 0.0042812 -0.6267600 -0.0252300 0.1716400 -0.6038200 0.0000000 0.5766300 0.5766300 -0.0220790 -0.0220790 -0.0220790 -0.0268710 -0.0268710 -0.6477300 -0.1062000 -0.1062000 -0.1062000 -0.0762990 -0.0579440 -0.0257770 -0.0510660 -0.0510660 0.2192700 -0.4277900 -0.4055200 -0.5960600 0.0589160 -0.1079000 -0.5300300 -0.6498800 0.0811560 0.2057700 -0.0231750 -0.0231750 0.1042200 0.0577750 -0.5444300 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.139 0.139 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.544 0.000 0.000 0.172 0.172 -0.604 0.000 0.577 0.577 0.000 0.000 0.000 0.000 -0.604 -0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.139 0.139 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.544 0.000 0.000 0.172 0.172 -0.604 0.000 0.577 0.577 0.000 0.000 0.000 0.000 -0.604 -0.462 0.000 0.000 0.000 7.6951218 13.3615202 7.1937757 9.9276565 NA 11.0284830 NA 1.8857696 8.4415557 8.2118703 0.5073126 8.5633599 4.2077133 9.9621913 9.4033048 2.7703005 6.9765103 9.2494162 10.1475200 10.9522900 8.8105810 7.4868431 11.4162681 -0.3817613 8.7991365 9.6000322 2.8292001 NA 10.5340752 3.3948022 13.4227811 12.1936006 7.1568911 9.9335399 7.3223383 9.3757890 5.2187695 1.1853591 -0.2297207 6.2187695 8.3401652 9.1690534 10.3822564 2.0922413 9.3701418 7.0087143 9.7656057 6.8927067 9.5173836 -1.8145140 11.3734722 2.1853591 3.5072745 9.9824289 7.4754351 0.1853591 10.2194582 6.5162642 4.6282895 0.9926959 14.4786211 NA 10.0394362 NA 7.9251277 4.2728070 8.1042103 9.3268155 13.791204 5.507275 8.755203 13.347542 10.141723 11.303964 13.343365 12.667777 9.467856 11.098049 13.465973 9.364012 9.412963 10.281733 NA 7.389918 11.695740 11.2085816 6.8255923 8.4415557 8.9975244 8.6861888 10.4915056 3.8000612 7.3452181 11.3544891 6.7245057 4.2938707 7.4497900 6.9325998 12.1397251 10.3646341 8.9568364 9.1190376 12.9445591 2.2727996 9.4093487 10.2534535 11.4898410 11.2012847 10.6946272 9.3068806 10.0158623 9.3425676 9.1607939 2.6447792 11.8964762 7.4959597 10.2297411 9.8137926 7.6408183 13.7212603 10.2588192 10.6836977 13.3402838 10.8595393 9.4793933 -0.2297207 TCGA-AN-A0XP 69 0 NA 9 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 5 5 3 2 2 1 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.39057e-07 10.82072282 0.36311499 6.99608024 11.17023905 -1.63710936 10.22611013 0.36311499 9.85092550 11.79888588 8.83476051 9.98513721 8.07216906 8.52421729 9.01323975 7.51537027 9.63571522 10.96763861 9.46506107 6.43990068 2.17043787 10.01682625 10.65108632 13.97814026 11.18346387 9.19439269 10.50774371 3.88664769 10.46866660 2.53301507 0.36311499 7.32598178 11.58603121 12.54695338 7.01054377 13.21033856 13.77502667 9.17686652 6.12463625 3.94804945 5.53301195 8.01234184 10.29308351 6.43990068 13.59201681 -1.63710936 11.08546609 14.23624112 6.10455263 9.02930932 10.81892635 5.69400261 7.75110281 -1.63710936 15.47007092 10.42984733 -0.05199728 6.28789703 NA 3.88664769 10.31582670 10.18963396 10.27035163 11.96717527 10.17526273 9.90418210 -0.63688501 11.83818551 9.99061924 6.16398572 9.37640804 -1.63710936 11.36149955 14.51649891 7.96552458 11.21620002 11.61441990 9.17846866 0.68499822 -0.05199728 7.97779508 8.96485633 12.94021916 -1.63710936 6.72063691 7.39925912 8.60268402 10.68501356 5.10455053 3.68500944 4.14444616 10.46374771 11.68951491 2.17043787 13.46140542 6.24572763 7.45848208 12.07550495 12.68416794 12.68388597 7.91575452 10.22533531 10.08631977 9.75593942 10.98833767 5.09100582 8.32018724 11.76449831 9.48656013 NA 10.21053437 9.00964418 2.68502066 3.57292604 10.16963506 10.15424826 10.45253593 9.87779945 15.42195445 10.31837209 9.78515017 9.67710209 2.94804011 16.92204791 9.19042819 12.42723872 11.28474043 10.16842630 9.21170825 8.74138035 11.05623912 -0.34400000 0.89708000 0.89708000 0.01321300 0.01000100 -0.30569000 0.01279500 0.00027728 0.00898790 0.00000000 0.00000000 0.00000000 -0.31541000 -0.30094000 0.00013863 0.00013863 0.00013863 0.00041593 0.00041593 0.01377200 0.00221930 -0.00788630 -0.71051000 -0.01876500 -0.01876500 -0.04278800 -0.04278800 -0.04278800 0.63244000 -0.37775000 -0.34400000 -0.29619000 0.01321300 -0.32898000 -0.30569000 0.01279500 0.01279500 0.00027728 0.01782400 0.01084200 0.00903120 0.00903120 0.00000000 0.00000000 0.00000000 0.00000000 -0.01286700 -0.30094000 -0.30094000 0.00013863 0.00013863 0.00041593 0.00041593 0.00041593 0.01377200 0.00221930 -0.00788630 -0.73216000 -0.71051000 -0.01876500 -0.73810000 -0.04278800 -0.04278800 0.63244000 -0.00539920 -0.02466100 -0.291 -0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.673 -0.682 0.000 -0.680 -0.680 0.000 0.000 -0.344 0.553 0.632 0.632 0.000 0.000 -0.298 -0.298 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.673 -0.682 0.000 -0.680 -0.680 0.000 0.000 -0.344 0.553 0.632 0.632 0.000 0.000 -0.298 -0.298 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.61575101 12.70119501 2.68502066 9.66286576 -0.05199728 10.49847408 NA NA 8.37850035 8.74138035 NA 7.26359034 1.17043787 9.84134938 8.99335254 -0.63688501 3.91767043 9.81789869 12.17986910 10.35496152 10.00383649 8.29972317 11.87496160 1.17043787 8.60625936 9.90418210 2.06353746 -1.63710936 10.06525806 2.75540037 12.86006399 12.01335185 8.11462939 10.34251063 10.90660060 9.13622472 3.88664769 3.57253804 1.17043787 1.68499822 8.43990110 9.24496410 10.70959918 2.06353746 7.76714097 6.80187775 9.62635462 6.58225340 9.53175749 NA 13.01441745 2.45053825 5.62987240 9.59780713 5.84899593 -1.63710936 9.38545326 7.29086301 5.25790448 -0.05199728 13.55753449 1.36305891 10.02486346 NA 8.10455263 6.51283210 7.38822485 8.56398406 13.752163 4.552912 8.080762 13.210339 10.658567 10.927949 13.592017 12.859128 8.961138 10.863890 13.621357 8.682758 8.964856 9.558458 -0.636885 7.331752 12.022970 11.01166769 8.07094472 8.98605249 9.09270614 8.48072841 10.29704900 5.19597352 8.34892729 11.18346387 7.34322481 -0.05199728 4.24573143 6.30964005 10.74678973 10.25714525 9.03727761 8.09610053 13.53687965 2.06353746 10.27035163 10.83552243 11.21580999 9.41497417 10.98788090 9.46111760 NA 9.38404462 6.55646314 2.36308695 10.68501356 7.33175179 10.37011272 10.46374771 7.10117731 12.40243291 10.18804418 10.62987195 13.50734534 9.81892627 9.82763121 1.68499822 TCGA-AN-A0XR 55 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 7 white not hispanic or latino 74.60.0 5 5 2 2 NA NA 1 1 3 5 NA NA 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.39057e-07 10.8942613 1.0475384 8.2686211 11.4908753 NA 10.0236518 NA 8.8829361 11.8446925 8.2274263 9.7528041 8.0520186 8.1891134 8.3730478 6.7590120 9.3855850 10.6996452 9.3622139 4.8753378 0.3105728 11.3089071 9.6768739 12.7416140 11.6289063 9.6414685 9.6717645 3.9735194 9.8804073 -0.2743897 2.6324776 6.3909256 10.9160313 12.9134825 6.5959541 11.7229451 13.5760203 9.1189797 7.2214441 4.0831453 4.6324776 7.9423350 9.8904961 6.0654388 13.4308976 1.7256103 11.5034609 14.2052748 7.6082326 9.1054657 11.1620405 7.9639942 7.7997304 0.3105728 14.4173603 9.2114184 0.3105728 7.9663803 NA 1.7256103 9.4389758 10.2963936 8.7071565 12.0283709 9.8664190 9.7021533 -0.2743897 10.6992866 9.9616034 7.6942562 8.6219215 NA 11.5905492 13.7389555 9.1276952 10.6017224 10.9264878 7.5804576 1.0475384 NA 8.0407390 8.2954448 11.3986774 NA 4.9923742 7.7451802 10.2109154 10.9110842 5.6444533 3.8130526 4.4535110 9.7135637 12.2168160 3.9350448 13.6047417 7.7699833 7.4737820 11.7190584 12.6340757 12.7559977 7.0384724 9.7255892 10.6112856 10.2853009 11.3185134 4.6324776 8.9338237 12.9622762 10.4325168 -1.2743897 10.3171116 8.6884853 -1.2743897 3.5845657 9.1254011 10.7923512 10.1162956 8.8854606 15.3384865 10.3250372 9.4173327 9.2184438 -1.2743897 15.3529664 9.1360406 11.6345447 11.0037482 10.5901623 9.9123225 7.6324798 10.5064119 0.00595300 0.74691000 0.76195000 -0.00241120 -0.00241120 -0.00292590 -0.00181820 0.01166200 -0.01424500 -0.00638360 -0.00638360 -0.00638360 0.01068600 0.01068600 0.01354900 0.01354900 0.01354900 0.00470210 0.00470210 -0.00748880 -0.00666000 0.02270800 -0.75764000 -0.78379000 2.14300000 0.05735100 0.05735100 0.05435800 0.03127800 0.06478000 0.00595300 -0.00831730 -0.00241120 -0.00292590 -0.01994800 -0.00181820 -0.00596900 0.01166200 -0.01424500 -0.01080100 0.01417300 -0.00015549 -0.00638360 0.00201170 0.00201170 0.75163000 0.79024000 0.01068600 0.01068600 0.01354900 0.00164740 0.00470210 0.01976600 0.01976600 -0.00748880 -0.00666000 0.02146000 -0.83148000 -0.81115000 -0.78379000 0.01152200 0.05735100 0.05435800 0.02525100 0.02354900 -0.80004000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.010 -0.812 -0.811 -0.811 0.000 0.000 0.000 0.000 0.000 0.741 0.000 0.000 0.000 -0.800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.010 -0.812 -0.811 -0.811 0.000 0.000 0.000 0.000 0.000 0.741 0.000 0.000 0.000 -0.800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.751 0.000 6.8288765 13.0567161 6.1349807 8.3161761 0.5574836 11.1291339 0.3105728 NA 8.8037401 8.1071323 NA 6.1767995 3.7699833 10.5365624 9.4033088 0.3105728 4.0831453 8.4277620 10.6884852 10.2417817 10.1363161 7.4329486 10.2427665 NA 5.3980151 9.7021533 4.2174401 NA 9.3576756 3.0475209 12.9228827 12.2641419 7.0384724 9.6451975 11.9951543 9.7658790 2.6324776 -1.2743897 1.0475384 7.9592091 8.7534952 10.0075193 9.9178821 2.1850102 7.7403906 6.4670561 9.6474302 6.3694455 9.3927008 -1.2743897 11.4333797 2.3105437 3.6324776 9.6314952 6.3480075 -0.2743897 9.8003997 6.0293690 5.4398359 -0.2743897 13.5843473 -0.2743897 10.1570868 NA 8.6414687 2.7255885 7.5200049 7.5521380 14.229583 6.126469 7.867696 11.722945 10.605173 11.147917 13.430898 13.104494 8.849711 10.467477 13.109563 8.602106 8.295445 10.098998 3.185026 9.268621 10.667737 11.4796416 7.1602173 9.1060287 9.2820953 7.9853325 11.5474569 5.0475166 9.2164401 11.6289063 5.9544080 NA 5.8445313 7.1634665 8.9532053 10.0825914 6.2801787 9.9411222 11.9044097 2.1850102 8.7071565 11.1429144 11.5716672 9.3161763 11.0779086 8.7396098 0.7256103 9.8197593 8.5990332 1.8954965 10.9110842 9.1911557 11.4074864 9.7135637 7.3292160 13.0961404 10.9483842 10.6169933 11.8503568 10.7930236 10.0587445 1.3105728 TCGA-AN-A0XS 63 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 8 2 2 2 2 1 1 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 5.562279e-08 11.0374435 7.3118773 7.3757493 12.0425956 0.3870316 10.3689888 -0.6128581 10.0327234 11.4944455 8.2512509 9.6614430 7.4423472 9.1790417 9.5488265 6.4850967 9.3800032 10.3954935 9.5437800 7.2635819 2.9720309 10.6236770 10.1051696 12.9870939 9.0952865 9.1806683 10.5551101 7.2818827 10.6971095 -0.6128581 1.7089818 8.8759094 11.4591975 12.3902314 8.5317230 12.8440609 13.2996268 9.9701476 3.9720309 0.3870316 6.9531185 8.6631891 10.0515121 8.0327235 13.1192323 2.4745399 11.0508453 13.1396546 1.7089818 10.4291791 11.8026746 8.6782357 2.7793858 NA 14.2661673 10.0682505 2.3870592 7.4066557 NA 6.6999472 9.2372518 10.0209683 10.5675956 12.0885879 9.9267084 10.0452764 0.7090259 10.9967054 10.1034557 7.7179821 7.5818220 3.0309187 12.2723799 14.8794188 8.3640011 11.7838034 11.2948944 8.4942820 1.7089818 -1.6130787 7.9943953 9.0735653 12.6524602 2.3870592 6.4314592 6.9682659 9.3089058 10.9291294 6.4204875 6.4259846 5.1285326 10.3958436 11.6946926 -1.6130787 13.3924263 6.4038727 7.5694592 13.2722846 13.7936685 12.8687382 8.0434900 10.5544830 11.1023834 10.7344177 11.1490316 4.6724649 8.6874173 12.0525118 10.9682655 NA 10.5510289 9.6485722 -1.6130787 2.4076519 9.6834075 10.9128304 10.7574799 9.2016473 14.6388246 9.8413642 10.8196068 8.8196069 5.6158841 15.4205093 9.6550219 12.8034006 11.4480985 9.8612779 10.0497333 8.0770630 9.7801549 -0.208740 -0.208740 -0.207130 0.022259 0.022259 -0.265680 0.023521 0.010956 0.017499 -0.647160 0.931960 1.445200 -0.272160 -0.272160 -0.279090 -0.279090 -0.279090 0.023714 0.023714 0.028717 0.019447 -0.283300 0.052053 0.052053 0.052622 0.043536 0.043536 0.043536 0.051484 -0.180720 -0.208740 0.001342 0.022259 -0.265680 -0.271690 0.023521 0.023521 0.047506 0.017499 0.017499 -0.286270 -0.293360 -0.647160 -0.281120 -0.281120 -0.281120 -0.281120 -0.272160 -0.272160 -0.279090 -0.279090 0.023714 0.023714 0.033363 0.028717 0.019447 -0.274130 -0.615420 0.052053 0.052053 0.043394 0.061890 0.043536 0.051484 -0.262800 -0.257850 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 -0.647 0.798 -0.281 -0.281 0.000 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 -0.647 0.798 -0.281 -0.281 0.000 9.43009225 13.80547754 5.77076827 10.01960574 4.29395898 10.26166209 3.24503923 -0.61285807 8.25742980 8.41358816 -0.02796912 9.07531522 3.59651777 10.18553667 9.32222990 2.29395898 9.04438346 8.78473953 9.29620799 10.68941824 8.86390222 7.88092057 11.07203262 2.84649332 9.79114205 10.04527641 4.34125995 NA 10.96047537 2.84649332 12.40064927 11.85250372 7.38424412 10.21876797 8.05417667 9.62128358 7.30294411 1.97203088 NA 2.08749679 9.55636350 10.11965627 9.82585669 5.28188367 7.82035833 6.80069286 10.49983014 5.65385110 9.70164816 -1.61307872 11.22390426 6.85467019 3.74461321 9.44253716 5.03826058 8.32664430 9.72969517 9.11328298 10.27428554 NA 13.71272169 1.19440229 10.39268943 NA 8.61708539 5.48509832 8.15690269 8.63380535 12.40029333 4.47452690 8.55071447 12.84406092 10.30961959 9.95692046 13.11923231 12.46613294 9.16349798 10.76725537 12.55063593 8.50210859 9.07356534 9.16842467 -0.02796912 7.74021184 11.35339007 10.9392536 7.3814184 8.7566621 9.6805366 8.1030271 10.4187660 7.6086518 8.4625440 9.0952865 5.9569209 0.3870316 6.3118773 6.6422828 10.7221760 10.6341023 9.3207554 8.6158834 11.8026746 8.3514057 10.5675956 10.6605691 11.1804650 10.0634628 10.2943311 8.9262236 -1.6130787 9.7166034 7.6128508 9.0209683 10.9291294 7.8648231 10.5418830 10.3958436 6.7621043 13.5382797 10.1335792 10.3077900 12.8934964 11.0512899 9.6403214 3.4314625 TCGA-AN-A0XT 54 0 NA 10 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 3 1 4 2 2 4 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 2.224912e-07 1.946798e-07 10.9314590 5.9965718 8.0279110 11.4395163 0.7870981 10.0032590 1.7871399 10.1169157 11.4359264 8.3493617 10.4141973 7.2628531 9.7325633 10.3320839 7.1402664 8.6651703 10.7126738 9.5944743 7.0350465 1.9570602 10.4879926 9.8666042 14.1695746 8.3795763 8.6985113 10.7892312 4.1794394 10.1713636 1.3720606 NA 7.2587950 11.0644068 13.7503316 6.2949148 12.0696287 13.2767793 8.0609153 7.3028189 4.7643992 7.5184384 8.1837242 7.7089604 5.3870316 13.5826518 5.2789735 10.1022690 14.3506732 7.7089604 9.2567614 10.6294697 7.0725217 6.3569748 NA 13.1130671 10.0903293 2.2465601 7.5184384 NA 5.4875603 9.6396489 9.8478153 9.8150254 11.9080053 9.8060150 9.6689981 4.9769455 11.3412286 10.2160030 6.2300627 7.3795768 3.8745806 12.2885834 13.9168452 6.3112306 11.1427459 10.1202748 8.3185008 0.7870981 5.9164026 5.7178573 9.7296340 11.8705988 -1.2129019 5.0159391 7.8532085 10.2222688 11.3730209 5.6574828 4.7643992 3.4309810 9.4884258 11.8872890 4.1090513 12.8614282 4.2465525 9.3272475 11.7749164 8.5602587 12.7263313 8.3626588 10.0456854 10.3659638 10.2936452 11.0843223 5.1269687 8.5519912 12.4231776 12.9444664 NA 10.2028611 9.0433281 2.8745806 4.7535938 9.6017019 10.7902859 11.0968800 8.5536485 15.0556614 11.1138298 9.9425702 9.7871195 3.9164002 15.4292558 9.3136186 12.0751203 11.2572699 9.4814774 10.3753656 7.9292264 10.1783630 8.3195e-04 8.3195e-04 -2.7707e-03 -7.6371e-05 7.5166e-01 -8.0169e-01 9.1705e-03 2.0805e-03 2.0805e-03 7.8099e-01 -6.3668e-03 -6.6460e-03 0.0000e+00 0.0000e+00 7.1999e-01 5.9700e-03 5.9700e-03 -2.2834e-02 -2.2834e-02 7.9026e-01 5.8309e-03 2.9133e-03 1.3961e+00 -7.8058e-01 -7.8058e-01 7.3303e-01 6.1090e-03 6.1090e-03 5.1359e-03 -7.8134e-01 8.3195e-04 -3.8593e-01 -7.9745e-01 -8.0169e-01 -8.0169e-01 9.1705e-03 9.1705e-03 2.0805e-03 2.0805e-03 2.0805e-03 -1.3953e-02 7.5000e-03 -8.0782e-01 6.0569e-04 6.0569e-04 6.0569e-04 8.3351e-03 0.0000e+00 0.0000e+00 -7.9344e-01 -7.9285e-01 -2.2834e-02 -2.2834e-02 -9.4046e-03 -8.0269e-01 -7.9686e-01 2.9133e-03 -7.8606e-01 -7.8311e-01 -7.8058e-01 4.8120e-02 -5.1721e-02 6.1090e-03 5.1359e-03 -8.1269e-01 -7.8319e-01 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 7.7354870 11.8255241 4.0725175 9.7252287 NA 11.8164067 1.7871399 -1.2129019 7.7899346 9.1933245 -1.2129019 8.0725217 2.8745806 9.5528199 9.8949904 NA 7.4453311 10.5188627 10.7821799 10.0777143 8.8681101 8.0931809 11.8820219 1.7871399 9.3349780 9.6689981 4.1794394 1.3720606 9.5141889 1.3720606 13.2402614 11.3167940 9.3569750 10.6709082 7.6419881 9.4613116 3.4309810 3.3106746 -1.2129019 -0.2129019 8.5782825 8.9099474 11.0433281 5.5420073 3.8267010 7.3531733 9.3136186 6.9469905 10.6204049 -0.2129019 10.1479665 1.5944530 6.7814725 10.0484034 5.0861426 4.2133862 9.5807227 8.6326096 6.9965729 NA 14.3706430 0.7870981 10.3659638 NA 8.7658298 6.9317776 7.9368664 7.9419373 13.265155 3.109043 7.770113 12.069629 10.766187 10.078290 13.582652 13.947897 9.275964 10.897603 12.554994 10.922187 9.729634 7.929226 3.310675 6.758663 11.874251 11.145496 7.140266 9.011121 9.325308 7.379577 10.983383 4.764399 6.681937 8.379576 7.770113 NA 4.741316 6.254889 11.397221 10.564375 6.820543 7.170823 12.747574 5.109047 9.815025 10.355076 11.796248 9.785005 10.657099 8.412828 NA 8.258754 6.827354 5.946990 11.373021 5.278973 11.195715 9.488426 7.238330 13.765830 10.224351 9.853209 11.967961 9.345540 10.121393 3.109043 TCGA-AN-A0XU 54 0 NA 10 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 74.60.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 2.35894e-06 5.550446e-07 13.1127700 3.6724027 7.4936193 11.7160613 -1.5370054 9.1247306 NA 9.6863508 11.3573913 9.6322511 9.2767337 6.5290416 8.8680941 10.7518185 7.6126997 9.6766643 9.5039271 10.7627329 9.5417704 4.7483539 9.9538033 11.0175414 12.2365038 9.8488149 10.3892484 10.6101574 5.9058948 10.4373563 5.6917714 -1.5370054 9.4860138 12.2099916 12.5793777 8.4587195 12.4326987 11.8383993 9.2253345 6.3995898 2.7848808 8.3966433 9.5411032 9.7684442 7.4316196 4.4629554 NA 11.9677715 8.7781021 7.6253436 9.3877649 11.5178959 7.6724055 4.8723412 0.4629946 15.5475540 10.0374419 4.2958406 7.6177708 -1.5370054 5.8379912 9.5303868 10.5623002 8.8871188 9.2077862 11.5509125 10.0526036 1.7848808 7.9786521 10.6793952 4.9865156 8.1424323 1.0478873 9.5831904 14.7639663 8.8982997 10.8125102 11.6633914 10.1844789 3.2178356 -1.5370054 9.0693577 9.3516957 10.9001844 -0.5370054 3.3209323 7.2410298 10.9234084 10.4323391 5.6025044 7.4430919 6.1633921 8.4258487 12.0477976 5.0479135 12.9502273 4.6724084 6.6228235 12.3596633 11.4502165 13.5069196 6.9264763 10.7792340 10.7755518 10.7879403 11.4352143 5.2178395 8.7460410 12.4565985 9.1993543 -1.5370054 10.7108800 9.7238720 2.5504082 3.6727987 10.0271019 10.2451317 10.3641965 9.9835711 14.6569783 11.2735241 9.8369051 7.4025320 6.5073459 12.5837573 8.7837529 12.5292099 11.8496233 10.1780565 9.4713812 8.6613976 10.3635175 0.1108600 0.7202400 0.0275430 -0.0023107 0.1708100 0.6383400 0.3368000 -0.3746700 0.8949400 -0.6412000 0.0674210 1.3372000 0.9160300 -0.1938300 0.6585400 -0.6757500 0.5335000 0.2664500 0.0822340 0.2869600 -0.1916100 0.3493000 -0.3370600 0.2027900 0.1951600 0.0500120 0.6546700 0.0101900 0.0881600 -0.3156000 -0.6528300 0.0604110 -0.6535800 -0.6636200 -0.2169300 -0.6705500 -0.6705500 -0.3451100 0.8949400 0.6119600 0.0000000 0.6379800 -0.6853500 -0.0352760 0.0030969 -0.6606500 -0.6485300 -0.9207500 -0.5003400 -0.6229000 0.1323300 -0.5410500 0.0312000 -0.6626800 -0.3400600 0.0945380 0.7574500 0.7401100 -0.6812900 -0.3552700 -0.3550600 -0.6566500 0.0101900 0.0154920 0.0777650 -0.2263200 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 7.68936486 12.97902181 5.04791350 8.91930701 4.93868570 11.21930032 0.04795711 2.04792222 8.40253161 8.10500438 4.76673296 10.39347551 4.74835389 10.65647787 9.29425980 5.48532055 4.69176864 9.60888463 7.02519494 9.95730813 8.39950224 8.40546699 12.63834608 2.27031962 8.09048615 10.05260364 0.78483897 -1.53700539 9.50392708 4.19087556 13.12651059 12.53282178 7.90796741 9.95530641 9.88974138 10.42945790 5.16339407 2.04792222 0.04795711 5.93055758 8.63787828 8.04415310 7.13537788 9.42295450 8.92925338 7.08500392 10.39590542 8.19087310 11.12784418 5.03280615 13.47361170 2.27031962 6.90589600 8.57158163 7.06732034 7.58965714 8.57799598 8.33946924 8.24922204 9.03470516 13.84317678 NA 10.62187770 NA 9.67240589 2.98652016 8.69056830 7.17719826 10.545611 8.115797 8.890265 12.432699 10.071549 10.847197 4.462955 7.378832 10.180119 11.719898 13.191989 11.177842 9.351696 8.420055 1.632873 8.219509 10.671187 10.246769 6.032808 8.192573 7.088661 5.149454 9.244566 6.451636 5.652776 9.848815 10.517557 2.270320 6.807248 10.054358 13.274227 9.375093 8.462614 7.652777 9.321711 7.732079 8.887119 10.340237 12.714731 10.040853 10.337934 10.059142 5.345595 9.425899 10.350980 7.759869 10.432339 8.032808 10.332932 8.425849 8.416087 13.028471 10.595131 11.327912 13.359379 10.595452 9.012737 8.341003 TCGA-AN-A0XV 67 0 NA 162 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 7 white not hispanic or latino 74.60.0 5 2 2 3 NA NA 1 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.112456e-07 11.97468557 9.05832759 7.88722244 11.12200665 2.80188293 10.84162465 NA 10.17648784 11.65113176 9.55877293 10.13861278 8.02491968 8.52707894 9.03358433 7.67224782 9.50509459 10.30690062 10.19763138 7.77457558 5.60923785 10.96804617 10.22057906 13.85234395 11.19977159 9.76651268 10.80778831 6.00351679 10.47110117 0.80190361 4.15237815 8.84080215 12.08913370 12.71559529 8.47005890 12.07975163 13.22310638 9.50440210 6.73734335 3.18040251 8.42686142 8.54738929 11.22394781 7.50786122 13.16453925 1.80190361 10.16470358 13.67744046 4.23484617 9.66843261 11.07847281 7.10200718 7.42832248 0.06488285 14.44908671 9.37021922 2.72787690 7.82425106 2.18040251 5.99565410 9.80638448 10.46045160 9.96578428 10.92238014 9.96477780 9.77572385 4.28730975 11.19505896 9.60213596 5.90621959 7.54873330 3.64987983 12.00265910 14.69552589 8.27503685 11.54469774 10.98774961 8.24482666 2.38683853 4.66978081 8.00155569 9.33092315 11.28428769 NA 5.03454588 7.14173318 10.05502140 10.97130708 6.06491733 6.07986874 4.23484617 10.09512481 11.93155247 0.47995483 13.26023841 5.97180793 8.02877688 11.76333277 12.83633817 13.02195905 7.43123934 10.21804721 11.02032523 10.62754784 10.81674049 4.66978081 8.09650381 11.71850899 10.61950637 0.06488285 10.00840915 8.79397162 0.06488285 3.33892353 9.58717200 10.81785561 10.25103166 9.22562922 15.29815017 10.18601925 12.44276063 8.84627705 3.68941099 15.65642034 9.14529100 13.44542364 11.95695424 8.84846145 9.33404418 8.29213248 9.68197468 0.02084500 0.02084500 -0.00573240 -0.00088838 -0.00088838 0.00535690 0.00271760 -0.00476140 0.00000000 0.66578000 0.52916000 0.21938000 -0.00434960 0.00221470 0.00077513 -0.00952590 -0.00952590 0.00368960 -0.00656160 -0.49972000 0.00119120 -0.00324260 0.00008183 0.00008183 0.00008183 -0.01662300 -0.01662300 -0.01662300 0.07466200 0.02084500 0.02084500 -0.00199660 -0.00088838 0.00535690 0.00306160 0.00271760 0.00271760 -0.00476140 0.00000000 0.00591300 0.05745200 0.05616900 -0.58180000 -0.50592000 -1.01420000 -0.00241200 -0.52250000 0.00221470 0.00221470 0.00077513 -0.00476450 0.00368960 -0.00711420 -0.00711420 -0.49156000 0.00119120 -0.00324260 0.05745200 0.00008183 0.00008183 0.02421000 -0.01662300 -0.01662300 0.08313900 0.01134300 0.01539000 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 9.11748545 12.78387840 8.19420035 9.45938018 4.48535598 10.52878237 2.47995483 1.93937705 8.20787529 8.60148853 NA 8.48013827 3.90621718 10.11839088 9.23317170 1.64989133 10.51715875 9.42246955 9.06491760 9.86095706 9.43392589 7.67471204 10.95213806 1.80190361 10.42539877 9.77572385 4.68941099 0.06488285 10.02395349 3.28730975 13.22971967 12.37059925 8.76882115 10.51784504 8.93013530 9.12831248 2.80188293 1.28729498 -0.51994173 -1.51994173 8.81311034 8.91978579 10.85906253 6.16645636 7.81015451 6.93528176 10.64329018 7.22142182 9.87227241 NA 12.98849257 2.80188293 5.57798767 9.98915590 6.05806318 6.15943544 9.95213813 8.17865987 8.04981044 0.47995483 13.98263141 1.28729498 10.68330301 0.06488285 9.26458991 5.83750684 8.53659264 8.73852095 13.55595465 4.58848079 9.20361596 12.07975163 10.19591694 10.76506817 13.16453925 11.78030756 9.27923657 10.73586873 12.99380592 11.86257901 9.33092315 8.29853735 0.06488285 7.08728568 11.33131362 10.661107 6.951630 9.031663 9.098341 8.356472 9.212106 6.145290 8.450061 11.199772 5.756079 3.689411 4.669781 7.080723 11.099487 10.498155 9.091902 7.916667 12.195381 6.718360 9.965784 10.392844 11.831722 9.792838 10.539975 9.076145 5.931165 8.999493 7.986739 7.398818 10.971307 7.548733 11.095104 10.095125 7.131007 13.830376 10.551417 10.853364 12.417605 9.684526 9.765935 3.524352 TCGA-AN-A0XW 36 0 NA 170 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 1 3 1 5 1 4 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5.446375e-06 1.526373e-06 11.6163039 1.6379348 10.5986770 11.1397882 -0.3619725 10.1091181 NA 10.1472311 11.4408712 7.6658568 9.9699875 7.6547592 8.2078065 9.4323669 8.0259684 9.7207653 9.1896593 10.5848573 8.0324139 7.0302688 10.4501283 10.0526362 13.6274785 11.2590871 9.2021006 10.7147666 8.1014752 10.7181023 0.2229282 -1.3621579 8.8583292 12.2495522 12.6167508 9.4716317 12.1452501 12.4929167 9.5205941 5.7672337 2.6379580 7.0932781 8.5236474 8.6932336 8.8153705 12.8095187 -0.3619725 10.6134408 12.8393857 2.5448316 9.4184662 10.2462058 7.1298044 8.3521966 0.6379348 14.4217688 9.6237930 3.7672310 7.2961628 -0.3619725 5.4834418 9.6999971 10.7425498 9.2609179 11.4801049 9.4428886 10.2332085 2.6379580 11.0534287 10.3152302 4.9047394 8.1654281 0.2229282 10.5002009 15.0611818 7.9935442 11.4891144 10.6813201 9.3050626 2.0973748 2.9598814 8.8655669 9.2294733 11.3762544 -1.3621579 6.5083161 7.1014757 9.9204603 11.5653586 11.0452187 7.9910978 5.5568156 10.5627635 12.0521077 3.0973748 13.8013648 5.8178611 7.1886976 12.1943373 13.4214608 12.9803035 8.6754980 10.0167877 11.4170548 10.8116281 11.4335848 5.2961637 8.4834410 12.4354099 12.2354217 1.2229282 10.2818072 9.0324136 1.2229282 2.5486832 9.8480135 10.1318064 10.7435321 8.6477797 15.1161202 9.8296271 10.0642157 7.5568141 3.7672310 14.6694153 9.3590502 13.0135335 12.0502562 10.0194940 9.3886580 8.4453058 9.7455669 -0.4983000 0.5124600 0.6503800 0.0053387 0.0157270 0.0449990 0.0189430 -0.0044312 3.6569000 -0.0077671 -0.0077671 0.0185230 0.0035840 -0.5224600 0.0141900 1.0429000 3.6569000 0.0000000 0.0000000 0.0181300 0.0169850 -0.0291750 -0.0651790 -0.1780300 3.6569000 0.3395000 0.3395000 0.3395000 -0.0626160 -0.0479360 -0.4983000 0.0026357 0.0157270 0.0171240 -0.4650400 0.0189430 0.0189430 -0.5392600 -0.4780700 -0.5361200 0.0069435 0.0108270 0.0107030 -0.5113500 -0.4875400 -0.0205490 -0.0453700 -0.5224600 -0.5224600 0.0141900 -0.4991300 0.0000000 -0.0069770 -0.0069770 -0.4900800 -0.0102080 -0.0291750 -0.0305400 -0.5806800 -0.1118200 0.0879690 -0.1741100 0.3395000 -0.5332700 -0.0099565 -0.0820040 0.000 -0.522 0.000 -0.459 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 0.000 -0.522 0.000 -0.459 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 9.6477797 13.4409721 9.1673815 9.7372987 4.1615169 10.9738996 -1.3621579 -1.3621579 8.4143842 9.2590872 1.2229282 8.4033201 2.5448316 11.0056387 9.0053657 1.4453029 8.2059071 10.5601637 10.3815232 9.4299279 9.3109508 7.9888903 10.7020201 2.0973748 9.1136844 10.2332085 1.4453029 NA 11.3789966 1.6379348 12.3208359 12.4746917 8.7280634 9.5373079 9.2001934 10.0281199 5.2526616 1.4453029 -1.3621579 2.5448316 7.8763555 8.1318066 10.5452172 2.8078701 8.3787942 5.1457467 9.6802943 6.6877998 9.7451681 NA 10.6428737 4.5205920 6.5144679 9.6448520 6.9526026 6.4323665 9.3869823 8.8715708 7.7927688 -0.3619725 13.7089524 1.2229282 10.6592780 NA 7.9140753 4.7040420 8.3470349 7.8498392 13.8668737 7.6037354 8.6561513 12.1452501 10.0173293 10.6470798 12.8095187 11.1583242 12.2024578 10.6141570 13.2066197 9.9012202 9.2294733 10.5709038 0.9598443 9.6066179 11.0099998 11.366084 6.192539 8.742550 8.531252 8.819103 10.239397 7.461318 6.671374 11.259087 6.767234 3.807880 5.746477 8.627644 12.385515 10.396174 7.574589 8.559792 10.617376 7.355628 9.260918 10.708072 10.252661 10.075183 10.749739 8.892980 3.847406 9.379671 8.240928 7.419311 11.565359 9.255418 11.082448 10.562763 6.932571 13.244588 10.649528 10.060016 13.139975 10.879338 9.335787 3.682349 TCGA-AO-A03L 34 0 NA 2442 breast stage iiia t3 n2 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 4 asian not hispanic or latino 61.60.0 2 3 1 3 1 4 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4.727937e-07 5.562279e-08 11.52228261 7.19482874 5.77870534 10.83045484 1.40364948 9.92428461 NA 10.25736533 11.66605442 7.98674881 9.90649771 7.46706097 8.25853447 10.03756933 6.66576085 9.88091827 9.92526632 9.85693653 6.95056056 -0.01144255 9.87076187 9.98956736 14.18466695 10.56762996 9.43295315 10.92330215 6.34618039 11.01446005 NA 2.40367675 8.07432239 11.87063454 13.67480062 6.42603323 13.49671202 13.93239471 9.31505783 7.24286922 5.15855516 6.14513329 8.55087066 9.39518772 7.85899301 12.81702939 -0.59640505 9.66928087 13.49170876 3.98863016 9.73434196 10.88974670 5.53294964 6.09715356 -0.01144255 14.65240571 10.86155974 -0.59640505 7.22703345 NA 4.33440380 10.27634079 10.73206039 10.50235596 10.84271757 9.48248389 9.69541223 2.86310589 10.98298181 9.86258513 7.25228886 7.18174263 2.92723278 10.08534352 14.87542049 8.31019559 11.72672067 10.64415912 8.16521705 0.40370401 6.39801853 8.21102096 9.30226741 12.01238277 -0.01144255 5.71654924 7.75017972 9.76286634 11.47764009 5.93504715 5.55341273 4.33440380 10.15018024 12.30424972 5.19808156 13.62427096 5.87127198 7.45351429 11.95897401 13.60299317 12.92041241 7.63248489 10.81808689 10.56227563 9.51307873 10.96136895 4.91146150 9.10756940 11.34214286 10.00450799 -0.01144255 10.16188907 9.21182577 NA 3.44894059 8.87432484 9.58046247 9.81676496 8.74685153 14.97449999 10.70058207 9.64505331 6.71200554 2.57359266 14.69065676 5.13158537 12.76608922 11.77421712 9.44258485 9.53359294 8.31055644 10.31087585 -0.3436600 0.3458300 0.3291100 -0.4972500 0.3052100 0.0019841 0.2926200 0.2654500 -0.4859600 0.0127950 0.0127950 0.0127950 0.0238470 0.0238470 0.2744200 0.9711100 -0.4922500 1.7756000 0.2571500 -0.5120900 0.2709600 0.9429400 0.2263800 0.8402100 0.6213300 0.1629500 -0.5249100 0.1779900 0.2621600 -0.4214500 -0.3436600 -0.0536090 -0.4894000 -0.0257260 0.0379240 0.2926200 0.2790000 -0.1252500 0.2958700 -0.5014200 -0.3476700 -0.4029600 0.0127950 -0.4800800 -0.4800800 -0.1061800 -0.1061800 0.0238470 0.0238470 0.2744200 -0.4922500 -0.5063400 0.2571500 0.2571500 -0.4750100 0.2709600 -0.1101700 -0.5024900 0.2557400 -0.5461300 -0.4187100 0.1629500 -0.5249100 0.2123800 -0.0630320 -0.5284900 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.110 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.110 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 8.64445731 13.44767574 6.82151890 9.74407244 1.90573598 12.00415960 2.49113478 -0.59640505 8.19808156 6.63248489 -0.59640505 8.04106991 0.98863016 10.87711800 9.85229853 3.35786162 8.76780044 9.80667786 9.17762932 11.33956761 9.88044248 8.82783204 10.24129380 3.57359266 8.57983898 9.69541223 3.35786162 0.98863016 11.38558990 2.31054371 12.68798395 11.96721970 7.69137853 9.24365694 9.95056042 9.09715277 5.21101998 2.21101219 0.98863016 8.84349681 8.95056027 9.56290656 11.18502562 4.21101998 7.88560670 8.33144368 9.64743486 6.12476443 10.12305467 -1.59640505 9.74184514 3.76122144 2.98863016 9.44616668 6.32562567 5.41489322 9.21984952 7.71881574 10.16355408 -0.01144255 14.19121142 NA 10.44361307 NA 8.15520986 4.21101998 7.95441270 8.70058225 13.573475 5.532950 8.269399 13.496712 10.033478 11.050225 12.817029 12.577811 8.452153 10.840117 12.956815 10.795983 9.302267 10.127327 3.211028 7.827832 11.705876 11.1876872 6.5483241 8.3766455 8.8548771 8.7819606 10.8885744 6.7028736 10.1447115 10.5676300 6.9114603 2.7255885 5.6704523 7.5738410 10.7924904 10.0988942 7.9330963 10.0888528 12.2226475 6.1718493 10.5023560 11.1535353 10.3395676 9.7295336 10.5345581 8.8995210 NA 9.0569319 7.2920437 7.2142375 11.4776401 6.4535143 10.1489200 10.1501802 7.3344029 13.5930272 10.2977257 10.0760913 11.6700133 11.0355250 8.8763567 0.9886302 TCGA-AO-A03M 29 0 NA 1455 breast stage ia t1c n0 (i-) m0 4-9-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 80.54.0 2 2 4 5 1 4 2 3 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1.482347e-05 4.505446e-06 12.3563471 6.8412171 6.9197500 11.8277023 -0.9037381 9.5330947 NA 9.7963894 12.5575429 6.8546066 10.0513066 7.0563852 8.8728161 8.8793814 7.9434408 9.2556239 10.7472106 10.6962961 7.0505801 5.1187501 9.8114872 9.7469862 15.1524493 10.3030923 9.1617993 11.1341017 7.8089101 10.4835901 -1.9034683 0.9037324 8.5660251 11.3806290 11.8690071 6.3678463 13.7601637 12.5774889 9.6799362 7.0300734 3.7968261 5.7402395 8.5362142 8.5173962 7.0002648 13.0870191 NA 9.9504724 13.8929299 3.7110984 9.5231616 10.8491820 6.8777430 8.0963831 3.1407787 14.6909657 10.0542107 0.4183519 8.0822252 NA 5.8972840 9.9636620 10.2797084 9.5289250 11.2486681 9.7929162 10.2211507 1.4182979 12.2116708 10.2496186 6.6586257 7.1270503 4.9911998 10.7905235 14.8293456 7.4802821 11.0478501 11.1492909 9.0956787 1.4182979 NA 7.0032739 9.1041112 11.4837275 -0.9037381 1.0963968 6.7652682 10.2559392 10.9790263 7.9340110 7.1651613 4.4714216 10.8283386 12.0165500 1.9037324 13.2467652 5.9418739 7.2911403 11.6819326 11.9759665 12.6824020 7.3537714 10.1993432 11.1035858 9.9153368 11.2076819 4.8777442 8.9912010 11.9674221 10.1668397 1.0963968 10.9465700 8.9410890 1.2663368 3.3765960 9.3904295 9.1691857 9.9125669 10.7837589 15.7789527 10.0917971 9.5200244 6.5268357 0.4183519 15.9278699 6.5517098 12.7778413 11.9732838 10.4760324 9.3466817 8.1159738 10.2539007 0.0000000 0.0000000 0.0000000 -0.4504800 0.0286220 0.0033299 0.2071700 0.8408100 0.0192230 -0.0031859 -0.0031859 0.4463000 -0.2187400 -0.2187400 -0.2282200 -0.2198500 -0.2198500 -0.0494650 0.0161460 0.0066653 0.0066653 -0.4587100 -0.4630200 0.0144700 -0.0024938 -0.4363700 0.0804560 0.4321000 3.6569000 -0.0239430 0.0000000 -0.1955000 -0.4429700 0.0033299 0.0033299 -0.2068500 -0.2068500 1.5677000 0.0192230 0.4425700 0.0076392 0.7137100 -0.0957800 0.0030522 0.0030522 0.0030522 0.0012430 -0.2187400 -0.2187400 -0.2282200 -0.2198500 0.0161460 0.0161460 0.0161460 0.0066653 0.0066653 -0.4551600 -0.0048461 -0.4630200 -0.4309400 0.0024969 -0.4363700 0.0804560 1.1921000 -0.1599700 -0.0186280 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3454966 12.7951964 7.1407776 9.0234203 4.4045421 11.8050361 3.4539389 -0.9037381 7.9165620 9.3082714 NA 7.6255993 1.2663368 10.7574933 8.6091237 1.4182979 8.5351750 12.5244162 8.8810182 11.7569363 9.1092313 8.8595957 10.2149999 2.1416617 7.2101258 10.2211507 6.1785314 -0.3186857 9.3312007 2.6199529 12.6506723 12.2787000 8.1298064 9.6610092 10.1072609 9.9347992 4.5721196 2.4182979 0.4183519 3.4183114 8.3690132 8.7083300 8.6916406 4.0505801 7.5522649 6.7723396 9.8678727 6.3678463 9.7184351 0.0963968 10.3143409 4.3817886 3.0032784 8.9510256 5.8512043 7.4001639 8.7110932 8.9889261 9.3846726 2.9037324 13.6239519 0.6813143 11.4359549 NA 9.4768442 3.6813481 8.1117982 7.6605329 12.615712 7.132557 8.524743 13.760164 10.027239 10.277535 13.087019 11.203273 9.000265 10.635057 13.012962 10.650972 9.104111 9.465981 2.418298 7.235935 12.920845 11.4109665 5.9543638 8.9045431 9.7284697 8.1930985 10.7106306 7.3276047 9.8475089 10.3030923 6.7220916 0.9037324 6.7863807 8.9366103 11.0516699 10.8002868 8.8818356 9.6056634 10.8174824 7.9101642 9.5289250 10.7659327 11.7826649 10.1128433 10.8327851 9.6865025 NA 9.3147285 7.3600280 8.3525917 10.9790263 5.8174826 11.3167616 10.8283386 6.8445765 13.6884314 11.0738421 10.2045809 12.5557508 11.0302583 9.2880593 3.3817817 TCGA-AO-A03N 59 0 NA 2031 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 80.55.0 6 3 3 2 2 4 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.42832e-06 9.019475e-07 10.553393241 2.324090516 8.432618313 9.810325488 1.002162421 9.776952770 NA 8.660377113 10.823939666 8.890909013 9.885572687 8.030071729 7.552912664 9.655906508 6.057448106 10.388567127 9.007790333 10.573444306 6.962167246 NA 9.279452955 9.924750015 13.284312952 11.069936133 9.514906138 10.711680308 4.250089935 10.354760902 0.587172939 6.944680440 6.653217696 9.740257886 11.894232194 7.018973490 11.870023542 13.809117996 8.950532860 5.660378183 NA 6.525727509 8.469771227 10.865577628 7.757053258 13.527135816 2.002162421 11.277708231 14.315792743 6.259553088 10.629699584 10.458520117 7.860146521 8.447180367 4.287568334 13.503811927 6.932903301 NA 7.278289615 NA 3.909053017 8.400909314 10.731361547 9.778598739 10.042455425 9.245339733 9.395556199 1.587124922 10.803065551 9.017580675 6.035588722 6.853914581 11.051333557 9.685160335 14.177481300 5.726269939 11.017929144 10.317881300 9.395556199 0.002162421 NA 6.915054746 7.780242504 10.819549082 1.587124922 7.935856317 7.230983993 10.032143006 9.998639224 5.191988953 3.324090516 3.002162421 10.416850928 11.870602413 2.461607135 13.384316822 8.690416048 8.348679474 11.723692127 12.877339048 12.515029554 8.292184490 11.044509080 10.501513288 9.663052984 10.117859684 3.002162421 8.912058799 11.676137182 9.174593175 2.324090516 10.163297575 8.663943720 NA 5.268950833 8.995104009 11.476885607 9.548095370 9.460572208 14.897977593 8.806296665 9.706069276 7.342015981 4.089625262 13.936501557 9.569171115 13.021061288 12.487617660 9.972990552 10.377748132 7.831888639 9.379376201 -0.4537100 0.9061300 0.9428200 0.0098669 0.0000000 -0.4017400 0.0062481 0.3372300 -0.1094000 0.0291840 0.0683780 0.0656560 -0.4801800 0.5581500 -0.0229740 -0.0229740 -0.0229740 0.4208300 0.4175700 -0.4488900 1.5076000 -0.0756120 -0.2860000 -0.2860000 -0.2860000 -0.1773600 -0.1773600 -0.1658600 0.6124400 -0.4639900 -0.4537100 0.0655130 0.0098669 -0.4017400 -0.3957500 0.0062481 -0.0084385 0.7383400 -0.1094000 -0.1059200 0.7227300 0.2623200 -0.4194800 -0.1555400 -0.1555400 -0.1555400 -0.1570700 -0.7204800 -0.9655200 -0.0229740 -0.0094046 0.4208300 0.4175700 0.4175700 -0.4488900 -0.4901600 -0.0450930 -0.4617400 -0.2860000 -0.2860000 -0.4521100 -0.1694200 -0.1773600 0.5971400 0.3934600 -0.4657900 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.561 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.058 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.561 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.058 7.681646034 12.177871150 4.809522488 9.634252011 0.002162421 11.231885784 2.324090516 NA 8.598355527 9.140437417 2.809517343 7.763716973 1.587124922 10.580066509 8.679885405 NA 5.743633446 9.257194292 6.089629499 12.156983784 8.226167468 7.068254837 12.164714356 2.587124922 8.407307284 9.395556199 NA NA 10.427381572 NA 13.306374368 11.818949355 7.481946317 9.260731630 7.929943637 9.896983362 5.956361055 2.702613220 1.324119326 11.177091344 8.199382305 10.051333489 11.377476645 3.809517343 7.583366388 7.688666445 10.352552419 6.723265023 9.530619750 NA 10.865190341 0.587172939 4.359717939 10.549696506 7.082930334 NA 7.411556747 6.250093725 6.278289615 1.324119326 14.692763910 1.002162421 10.015488370 NA 8.233386718 6.436793147 8.583366388 8.953450337 12.237939 5.730086 8.926978 11.870024 9.776953 11.364109 13.527136 9.730937 8.609496 10.385330 13.163613 7.110690 7.780243 8.498021 NA 7.245340 11.150007 10.548095 6.477899 8.887862 8.870988 8.154451 10.649003 4.461594 6.688666 11.069936 7.750359 2.461607 4.884808 6.187833 9.874841 10.111343 7.121107 9.313914 6.587128 3.089634 9.778599 11.888053 9.756218 9.427382 9.700870 6.890909 NA 8.751918 8.457493 1.002162 9.998639 8.543262 9.304805 10.416851 7.896983 13.574925 10.258374 11.087638 12.387219 10.706502 8.665724 NA TCGA-AO-A03O 69 1 2483 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 47.68.0 7 3 4 NA 1 4 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 1.561063e-06 2.42832e-07 11.7017415 5.5860111 7.2309168 12.4944320 -1.1952856 9.9190455 -1.1952856 10.0055510 11.8735986 7.3592409 9.3399277 7.4592882 9.0865824 8.5777917 6.3360334 9.0490162 10.1747949 9.3563606 6.5257510 5.1084325 9.9352230 9.1958960 13.3939524 11.0534695 8.3399279 10.8623058 6.3745074 10.6845879 2.2640860 3.6120104 7.5085562 9.1786051 12.4841325 5.9339361 12.5362896 14.0849520 7.8814682 4.0525811 NA 4.8046525 8.1107140 10.8950957 5.1445033 12.9849501 1.9745660 9.1709746 13.7244934 4.2309177 9.2818338 12.0759695 7.6532750 6.1796922 NA 15.0665389 9.1533805 0.3895668 9.6587415 -1.1952856 3.9339314 10.2884682 9.8284067 9.6665148 10.0000247 10.3500996 9.2065985 -1.1952856 11.3389553 10.7390804 6.2558632 7.3282144 6.9390784 10.9377946 14.8025375 8.0059675 11.4184419 10.7416583 8.5376676 0.3895668 0.8046318 8.9870468 9.9638931 11.8225047 -0.1952856 4.5325726 7.5393620 10.2594658 10.4294479 5.4628638 6.1175351 5.2803848 10.0929417 12.2160310 2.3896219 13.4252732 5.9339361 7.4340093 11.1129915 10.8744378 12.7797839 8.1015687 9.7032539 10.9566202 10.0836825 11.4668757 4.7588468 7.9416433 12.1730224 11.9800460 NA 10.3539557 10.0460397 1.6120222 2.9022666 9.4385559 10.9486733 9.7175417 9.5868315 14.6127367 9.6634104 11.0590906 8.1731589 9.2824106 16.2120364 8.6103963 12.3628339 10.4902772 10.4376476 9.5085560 8.5695241 10.8371975 -0.0062421 0.8026200 0.9003000 -0.0147780 0.4248600 3.0389000 0.4449900 -0.0103570 3.6569000 0.9162200 0.8647700 2.7800000 0.5936800 0.3631300 -0.0530710 3.6569000 -0.4844900 0.9017000 3.6569000 -0.5159900 0.2962800 -0.0024938 -0.1352300 0.0351000 0.0279910 -0.0712940 1.2850000 0.3264200 1.7051000 0.0018030 -0.0062421 0.0046683 -0.0147780 0.0080567 0.3906500 -0.0187650 -0.0187650 0.0000000 0.2483500 0.4268800 -0.0520220 -0.0149160 -0.9944400 -0.4881700 -0.0164290 -0.5033800 -0.5163000 0.3357700 0.2491800 -0.0530710 -0.9745200 -0.4891100 -0.1329000 -0.1061800 -0.4891100 0.3301100 -0.0024938 -0.4744800 -0.1352300 0.0351000 -0.0106460 -0.0733430 0.3664100 -0.0469890 -0.0465830 -0.0027707 0.594 0.405 0.000 0.000 -0.428 0.000 -0.516 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 1.164 1.164 0.349 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.380 0.380 0.000 0.000 -0.517 1.620 -0.483 -0.483 0.134 0.594 0.405 0.000 0.000 -0.428 0.000 -0.516 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 1.164 1.164 0.349 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.380 0.380 0.000 0.000 -0.517 1.620 -0.483 -0.483 0.134 8.1015687 11.1996509 4.8270213 9.1544865 2.6078866 10.5553594 1.6120222 -1.1952856 8.0478263 8.4998806 NA 7.6023136 1.3896219 10.7592123 9.2671547 2.2640860 6.9645234 9.4981393 10.6899675 9.8761148 9.3212487 7.5120119 9.9203463 1.8046318 9.0573179 9.2065985 4.1622020 NA 10.9752034 NA 12.4909341 12.3119515 7.0334715 10.4726509 12.5818050 9.9777048 5.4628638 2.2640860 NA 7.9969451 9.0466357 9.2161633 9.2722579 3.1969689 9.3368330 5.8158802 10.1422743 6.4557037 9.3242886 NA 11.0015618 2.5051033 2.7115390 9.9009921 5.2394477 5.6248320 8.4193623 8.7486323 8.8828032 2.1265765 13.8987301 1.3896219 9.9638931 0.3895668 5.7471672 3.3896081 8.0784481 6.4841333 12.898971 7.525752 9.177517 12.536290 9.838764 10.821461 12.984950 12.309347 8.556196 11.635710 13.003865 11.159177 9.963893 9.165499 NA 7.320352 11.447155 10.998486 5.954399 8.930066 9.273276 9.405494 10.124104 6.484133 4.162202 11.053469 5.328215 1.126576 4.892114 7.939053 10.627223 10.189436 9.241364 7.972071 12.868974 6.886801 9.666515 10.934257 11.458617 8.541054 10.143946 8.222505 7.900049 8.834602 9.474237 6.933935 10.429448 5.404566 9.611202 10.092942 7.300507 13.455984 10.530445 9.152274 12.524469 10.940041 8.863997 2.505103 TCGA-AO-A03P 54 1 2911 2576 breast stage iia t2 n1 m0 4-9-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 47.67.0 3 1 1 NA 2 4 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 2.781139e-07 11.928946494 1.739502506 7.061420879 10.892284383 0.739502506 10.010955606 -1.582512001 9.573647566 11.715483729 7.456483379 10.136525300 6.716772828 8.411917682 9.553273712 6.876995719 8.846971189 10.855576548 10.240931660 6.631884221 0.739502506 9.751278927 9.325206273 13.623892027 12.411122033 9.252825303 11.180569283 4.567314228 10.421433607 2.505027086 0.002594517 7.104065080 10.508007660 13.543542849 10.761860348 12.931908645 12.798904585 6.913419624 4.118002497 NA 6.818444132 8.714480795 8.766292691 6.607389500 13.541604943 2.665483733 10.806119891 14.754315043 NA 9.654062954 11.199948406 6.089989587 6.089989587 0.739502506 13.526609051 8.345342259 0.739502506 7.541685967 NA 4.925358606 10.001587359 9.867229001 9.845924676 10.909918353 9.843304909 8.985520638 -1.582512001 11.248871660 9.228939151 6.651183753 7.564769125 5.046923175 11.705276810 14.420555200 7.973572246 11.153966351 11.077114391 8.997823045 0.002594517 -0.582512001 8.030433197 8.664305053 9.834889576 1.002522510 5.925358606 7.202199263 9.612321349 10.692815983 4.275543487 4.224920075 3.417569010 10.263838301 12.591709894 3.843833137 13.708627178 5.617236763 7.943085019 11.251837951 11.294848564 12.631883539 7.592489927 10.585296179 12.144314765 12.193233342 10.925359051 4.646381580 8.781699035 11.794774952 12.451675585 0.002594517 10.143782547 9.234548023 -1.582512001 3.401698723 8.520852400 11.556955893 10.424591685 9.059616208 15.071529070 10.848278342 10.114966375 7.634310103 5.917410272 15.564858802 5.211981714 11.625798780 10.698045234 10.334936482 9.280201698 8.680833487 10.361562659 -0.3650200 0.4672400 0.4636500 0.0745060 -0.2374100 -0.0097548 -0.0631660 0.0297470 0.0143300 -0.7712400 0.0718220 0.4818000 0.0036076 3.6569000 -0.1072300 0.3904800 -0.7397600 0.1713600 0.1713600 -0.0861200 0.4314200 3.6569000 -0.1808100 0.4067700 0.4067700 0.2722200 -0.2375300 1.9020000 3.6569000 -0.3178600 -0.3650200 -0.3123700 0.0745060 0.0000000 -0.0097548 0.0130740 0.0109820 0.0297470 0.0143300 0.0143300 0.0171240 0.0297470 -1.2617000 -0.0069195 0.0059700 0.0059700 0.0298090 -0.7561600 1.0559000 -0.1072300 -0.7577100 0.1713600 0.1713600 0.1713600 -0.0654470 -0.3587400 -0.5242000 -0.3498500 -0.2002500 0.4067700 1.4805000 -0.6841500 -0.6263800 0.8295800 -0.3917000 -0.7663600 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.560 -0.560 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.560 -0.560 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 8.2070983 12.7574840 7.4231890 9.0514678 4.8431598 10.9367092 0.7395025 -1.5825120 8.8636139 8.0118892 NA 6.7969429 2.1179942 10.5155965 9.8227059 3.8098774 4.5673142 10.3446016 6.4231882 10.7778628 9.5286872 9.1707811 11.4016268 0.4175960 9.2313455 8.9855206 2.1179942 NA 11.2494654 3.8438331 13.3998005 11.9242439 7.7860709 10.6442777 8.9064087 9.0659220 2.8098877 2.9411251 NA 2.5874850 9.4856709 9.7877069 9.6595475 2.3244650 6.0318319 8.1989243 11.3564089 5.9489465 9.6896109 NA 12.6839850 2.3244650 5.0757765 10.5072069 7.3233728 4.4175623 8.3274574 7.2910086 6.4509869 2.6654837 14.5796803 -1.5825120 10.5445914 -1.5825120 9.0802329 5.2249201 8.6367330 8.5899919 14.931647 5.461957 9.129231 12.931909 10.544527 11.197079 13.541605 18.078561 8.228136 10.806120 12.495131 11.786480 8.664305 9.104940 2.002523 8.455111 12.485335 10.790429 6.775116 9.031354 10.030433 9.499714 11.059427 5.324454 10.013754 12.411122 6.306308 -0.582512 6.814170 7.640045 9.593738 10.067270 9.931637 9.743994 10.348671 5.198922 9.845925 10.837788 12.438544 9.754629 10.695433 8.669047 -1.582512 8.389280 6.724948 5.287930 10.692816 5.809883 10.315032 10.263838 7.209053 14.524373 10.702678 9.874945 12.233948 9.857395 9.291009 1.002523 TCGA-AO-A03R 57 0 NA 2091 breast stage iib t2 n1a m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 56.63.0 3 2 5 NA NA NA 3 3 1 3 NA NA 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.118507e-07 3.337367e-07 11.0119943 4.7026077 6.8009077 11.4333150 0.4171639 10.1804156 NA 9.2405705 11.4489044 11.7123981 9.8827696 7.5099602 8.4143825 9.2626932 8.6193272 8.5745500 9.8888784 9.5896307 6.6556080 6.3829871 10.9060475 11.2373821 13.1442727 10.7769527 9.4312237 10.4101415 7.3180700 9.8202152 1.0021624 0.4171639 7.7659312 13.0294958 12.0554128 6.7835248 10.7598334 12.7455976 9.5795945 6.8684139 3.4172044 8.8116659 8.1586703 8.0574481 7.5921288 12.2199215 0.4171639 10.7238346 14.3250796 5.3479420 10.1862145 11.1241308 7.5770745 9.0392549 2.5871249 13.6050671 8.7413837 4.4172044 6.7570526 -0.5827281 4.1720874 8.0355887 9.3464617 9.1019518 9.2293805 8.0282282 10.5198351 2.7391352 10.1586701 10.0291501 6.0319134 6.5971125 3.4172044 9.6290914 14.7299089 5.8735155 10.8180826 9.6544132 8.0501986 0.4171639 1.0021624 7.5720211 7.9130581 11.6384882 NA 5.0896295 6.7570526 10.9412551 11.3074675 7.2937199 5.0610590 2.8766250 9.4492489 12.0803165 4.7026077 13.5028416 5.1451231 7.2998463 11.3086072 9.8837896 12.6076452 6.9640971 10.2237528 10.6921636 10.1870410 10.9832572 3.0021624 8.7300863 11.1446983 12.3620982 NA 10.6478241 10.2309844 -0.5827281 3.7398481 9.6020784 10.5701217 9.0520142 8.2844817 15.3041619 10.1072011 11.4097875 7.8888784 2.7391352 15.3927825 9.2500933 12.3939463 12.2130399 9.6686856 9.4058879 6.9170486 9.8726022 0.01126100 0.59458000 0.57416000 0.02216400 0.00263570 -0.00138580 -0.00581400 0.00944910 -0.62941000 2.73940000 2.23100000 2.20060000 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.00138580 -0.64246000 -0.00105080 -0.61987000 0.01279500 0.02496900 -0.60960000 0.03115500 0.53960000 0.02482900 0.02482900 0.02104300 0.01670500 0.01126100 0.01126100 0.00000000 0.00485790 -0.00138580 -0.00138580 -0.00429290 -0.00429290 0.00944910 -0.62941000 -0.62941000 0.00221930 -0.00010962 -0.62655000 0.00903120 0.00903120 0.00903120 0.00903120 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.62093000 -0.00105080 -0.00105080 -0.61987000 0.01279500 0.00059652 -0.60989000 -0.60960000 0.03115500 0.00944910 0.02482900 0.02482900 -0.62417000 -0.60555000 0.03947800 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 8.6045551 10.6315223 4.2751859 10.0171160 6.0754150 10.4207211 3.8766348 1.4172179 9.2983172 7.1245618 NA 7.7255421 4.2245574 10.6296996 9.2829364 4.6651312 8.5152354 8.7987462 8.6168756 12.3297183 9.5354045 7.1037032 11.2967864 2.0021624 8.1072014 10.5198351 4.2751859 NA 10.6857452 2.7391352 14.1558232 12.1706289 6.9090566 8.9582998 8.1620368 10.0745216 2.4171909 1.7391136 1.0021624 6.1853869 8.7118239 10.5092996 9.8191492 5.6651312 7.5764692 8.1620368 10.4340114 6.3120207 9.9368395 0.4171639 9.5846213 1.4172179 3.8095173 9.6583402 6.0580264 5.2500937 9.5783351 7.3772053 8.4805984 NA 14.6268850 -0.5827281 10.4526896 NA 9.1886927 5.5046649 7.8518315 8.9870588 13.355978 4.971792 8.754825 10.759833 9.665131 11.356415 12.219921 11.857813 8.655608 9.302900 13.245042 12.352000 7.913058 9.156984 1.002162 7.262693 10.931917 10.9490719 5.5257275 8.2998463 8.9407652 8.3538411 10.0408378 6.5669506 5.7570526 10.7769527 7.8888784 2.0021624 5.7391325 7.7051001 9.9269782 10.4602304 10.4492488 10.4595466 7.9870588 6.1853869 9.1019518 10.7758544 10.0556391 9.3523681 10.5618614 8.0096601 -0.5827281 8.6944906 8.7346158 7.7072218 11.3074675 4.0021624 11.3240938 9.4492489 7.2051061 14.6026981 10.7954981 10.9095571 11.8526130 10.6162620 9.6745909 2.5871249 TCGA-AO-A03T 42 0 NA 1456 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 56.63.0 3 2 1 NA NA NA 1 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942656e-06 5.203543e-07 11.8380768 4.8477715 7.2498691 11.4869817 1.3623296 9.5151353 NA 9.2859681 10.8388871 7.8052867 9.5911621 7.0004170 8.6234982 9.4529852 8.6366050 8.8605941 9.1619489 10.4838769 6.7751243 4.9946114 11.5827217 10.4257384 14.1468964 10.0786484 8.4154549 10.5708216 6.8348313 10.0169794 -0.9595985 2.4998586 6.5322686 12.3137738 12.9683784 8.6986269 12.2936719 12.2311659 8.6178443 7.6661239 4.2883438 8.8201346 8.1515509 8.9711527 7.5120902 12.4098763 1.0404015 10.5698458 13.2513910 5.3072026 10.3200259 10.5901999 7.4540434 9.0148298 NA 15.2744309 11.0025775 4.1278809 8.5969214 NA 3.5639757 8.0119590 9.5049610 8.2277675 11.2767285 7.9473061 9.9069216 -0.9595985 10.0669387 9.7700360 6.6914672 6.3258181 6.4666793 10.1964984 14.5293538 7.3214646 9.6752263 10.1218987 8.2716367 1.3623296 7.5120902 8.2620023 7.8348313 11.1088577 NA 5.2103421 7.3532986 10.9053752 10.2871559 8.3441960 5.1065033 4.8733063 9.8348311 11.7453996 3.2883438 13.2482685 6.4998475 7.1952334 11.5008712 12.1132178 12.0715996 9.2847792 9.7751250 10.7334666 10.2296222 10.1748416 2.3623296 8.8102532 11.1873021 11.6180801 -0.9595985 10.4587950 8.6914668 2.0404015 4.2498700 8.9562945 10.0820745 9.9184661 9.5282554 15.3666517 10.7797740 9.9996928 8.2327082 3.2103421 15.8775258 7.7852491 11.1825224 11.7214340 9.6281929 9.7827247 6.7057513 9.0307888 0.0070826 0.0070826 -0.1226500 -0.5546700 0.0086180 0.0073609 0.0000000 -0.1162600 -0.5544100 -0.0162920 -0.0162920 2.4370000 -0.4624900 -0.5629600 -0.0142280 -0.0142280 -0.5624600 -0.4543600 -0.0048782 0.0037465 0.0153080 1.0298000 -0.0263040 -0.0263040 0.5640100 -0.0336770 -0.0336770 -0.0336770 1.0224000 -0.0113350 0.0070826 -0.5808800 -0.5546700 0.0073609 0.0073609 0.0000000 0.0066653 -0.1162600 -0.5544100 -0.5729600 0.5249800 0.0273570 -0.0162920 -0.0254830 -0.0254830 -0.0254830 -0.0320410 -0.5629600 -0.5629600 -0.5729900 -0.5624600 -0.4543600 -0.0048782 -0.0048782 -0.5468300 -0.5634600 -0.0040162 -0.0238240 -0.5795000 -0.0263040 0.0141900 -0.0336770 -0.0336770 -0.0208240 -0.0069195 -0.0187650 0.000 0.000 0.000 -0.548 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 7.84131525 11.13284208 5.91078062 10.14566905 4.65512281 11.63473991 3.28834380 1.36232961 8.86218914 8.89060203 NA 7.04604026 2.74086282 11.13449300 9.00764151 2.94731082 7.35782820 8.93977225 9.80528681 11.41219192 9.64182399 7.09569766 10.83807683 1.36232961 8.29071375 9.90692155 4.68426893 NA 11.58054331 3.21034210 12.71868531 12.25791868 7.67704023 8.93219910 8.27882019 10.31012639 5.10650327 2.04040152 0.62536402 4.87330630 8.64774550 11.23547984 9.73825172 5.59500529 7.73665290 8.61216780 9.83726603 5.64032882 10.37747963 1.62536402 10.70575117 -0.95959848 5.08480839 9.82331517 7.45641027 3.74085202 8.87488639 6.72691566 11.40974000 NA 14.35602483 2.36232961 11.39906650 0.04040152 7.92611153 6.66977231 8.31187816 7.49162625 13.136459 6.159357 8.950308 12.293672 10.469299 10.246209 12.409876 13.063910 7.979994 9.269234 12.432330 10.683370 7.834831 8.020555 1.362330 7.117231 10.333312 10.7425880 6.3258181 8.7563772 8.6824669 8.0375947 8.7591708 6.0848084 6.3350366 10.0786484 7.6914672 NA 8.5988360 8.2625821 10.0184107 10.5959631 8.8921642 10.1443587 8.2103402 6.2203242 8.2277675 10.5541429 10.4273556 7.8380769 10.3595228 6.8477702 -0.9595985 8.9496934 6.2498682 6.0290995 10.2871559 4.7683379 11.0101615 9.8348311 7.6403281 14.1457100 10.8307638 9.8772547 11.9274455 10.3930105 9.3025101 1.0404015 TCGA-AO-A03U 31 1 1796 NA breast stage ia t1c n0 (i-) m0 4-9-2014 female 2001 NA NA other specify yes 0 white not hispanic or latino 80.54.0 4 4 2 5 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-08 2.781139e-08 11.6310877 7.3537132 6.9565097 10.5744708 0.2875905 10.4903603 NA 9.8986491 11.2899120 8.0852860 9.7724472 7.3882869 8.4258961 11.1849025 5.1331155 9.3251712 9.5110228 10.2305053 8.7054769 2.0949792 9.9780589 11.7754644 13.3802576 10.1287955 9.6604894 10.3624348 5.7470570 10.4869899 NA 1.2876496 8.9573952 12.5224418 13.0619481 7.2359912 11.9847005 11.6427001 12.7202315 5.1824420 -1.7121731 5.3961492 9.6544928 5.3750881 7.5497192 6.2418211 -0.7124095 11.1217003 10.6216182 4.5730291 9.4656107 9.3141477 6.1456061 4.0155422 NA 14.8383807 13.0864100 3.0949792 9.1556751 -0.7124095 4.1205178 9.6274742 9.8484348 9.8645810 10.5919757 9.9915279 10.0353978 1.0949792 11.4119072 9.8972648 4.7794751 8.4373713 2.9880666 5.1078050 15.3233255 7.5752216 11.4311670 11.3170841 9.4162632 1.8725924 NA 8.3224235 9.6106790 13.1758919 0.2875905 4.9741254 7.0981964 9.7383201 11.6012160 6.4921961 8.7904560 5.1824420 11.0524959 11.3925506 NA 13.5759497 4.1205178 6.5822444 12.0627202 12.0502140 12.5402158 7.7138889 11.1928232 10.9371050 10.7770735 11.1909414 4.6970176 8.0070132 11.0117118 7.3590863 -1.7121731 10.3836805 8.8772755 2.0949792 2.5544169 9.8359646 10.3849981 10.4055921 8.4117457 15.3917521 9.8796140 9.7154610 6.5868323 1.4575418 12.9516271 8.1687383 12.7893993 13.5869039 9.7017810 9.5649118 8.2876242 9.6112759 0.01265500 0.01265500 0.01265500 -0.00249380 -0.00249380 -0.01098300 0.00069327 -0.00401620 -0.00401620 -0.00290910 -0.00290910 -0.00408080 -0.10972000 -0.10972000 0.00069327 0.00069327 0.00069327 0.00027728 0.00027728 0.27316000 0.00000000 0.01056400 0.00763920 0.00763920 0.00763920 0.01098200 0.01098200 0.00877720 0.01223700 0.01265500 0.01265500 -0.00253290 -0.00249380 0.00152550 -0.01098300 0.00069327 0.00069327 -0.00401620 -0.00401620 -0.00401620 0.00332990 0.00180300 -0.00290910 -0.03163200 -0.03163200 -0.03163200 -0.03163200 -0.10972000 -0.10972000 0.00069327 -0.00173220 0.00027728 0.00638710 0.00638710 0.27316000 0.00000000 0.01056400 0.01405100 0.00763920 0.00763920 -0.00263220 0.01098200 0.00877720 0.01223700 -0.00290910 -0.01546600 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3537134 13.3698565 3.5730230 10.4961635 2.7646434 10.3580807 0.6095659 2.5355553 8.5485437 7.9368805 0.2875905 7.7070160 1.7470436 10.0441807 9.0820402 1.0949792 6.3961492 10.5736044 12.7832296 9.9165255 9.8098625 7.4749762 13.0475645 5.7552294 8.8199801 10.0353978 5.2064869 NA 11.0202158 3.4169073 13.0776164 12.9905545 8.7128403 10.6171404 9.0010109 8.8847457 5.3099910 1.0949792 -0.1273682 NA 8.4995127 10.0994004 7.6863682 12.2369039 9.9497987 6.7096890 10.0763426 5.4169073 9.4958586 11.6702483 11.5285647 3.6799417 4.7470543 9.3860052 6.6200189 4.1205178 10.5025505 9.9811113 5.9169805 -0.7124095 13.9525993 NA 10.7112655 -1.7121731 7.8555805 4.9169829 7.6948920 8.8744641 11.7089002 5.0949792 8.7232947 11.9847005 10.7714401 10.2187312 6.2418211 11.2174375 8.9839313 10.7577341 12.7795400 10.6460008 9.6106790 7.7012524 -0.1273682 7.4600520 10.6103975 10.9536264 7.2242622 8.5152402 8.3333839 7.6863682 9.7026636 9.1338982 5.9458347 10.1287955 6.9206196 0.2875905 9.7480803 7.0019047 12.0774636 10.9682036 8.5284158 8.4181950 12.3237979 5.7874690 9.8645810 10.3134559 11.6777933 10.9185739 10.3800511 9.4091578 NA 9.6383150 8.1731069 4.4970758 11.6012160 7.3044326 11.5686850 11.0524959 6.9314810 14.2280962 9.9997214 10.3367922 13.0358172 9.4316451 9.2257336 -0.1273682 TCGA-AO-A03V 41 0 NA 886 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 3 2 4 NA NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456992e-06 2.42832e-07 11.3987437 7.8368551 8.4341378 10.7916098 1.4568587 10.3490752 -0.3505225 9.9145316 11.9216951 9.1944673 9.8595652 7.5473480 8.6787899 10.3346895 8.0070547 9.8968369 10.7051242 10.2093578 6.7209652 2.1089258 10.4776393 9.3086066 14.6060377 11.7634077 8.8318972 10.9857303 4.8783232 10.4796217 0.2345013 1.4568587 7.5043709 11.1102146 12.5022273 6.1007149 12.3959121 13.5163470 9.5428044 6.8638220 4.4308606 6.0245413 7.8118942 14.1320586 7.4918531 13.1210510 0.9714424 11.1135379 12.8709388 6.0332071 8.8796313 11.1968793 8.3516756 7.2494159 -1.3503386 13.4688022 8.5443204 2.6495005 7.3706020 -0.3505225 3.5074775 10.2865804 10.5148494 8.1413556 11.3757209 10.2752116 9.5167815 5.7787868 11.2890695 11.5672478 7.3671788 7.9162891 5.5198690 9.7176093 14.3333472 8.3015410 11.0150050 10.2335257 7.6579315 2.2344707 5.2193583 7.9578421 8.9406733 11.4983213 -1.3503386 5.4568587 7.7182808 9.0986514 10.5835621 4.7155914 4.3499455 3.9349033 9.9854513 11.9542819 5.1089342 13.6083273 5.1089342 7.6066051 12.0482464 12.8996531 12.8191929 7.3324976 9.2549823 11.8757644 9.8783215 11.5631402 5.3360048 8.4949927 12.1214319 12.5834700 4.0757636 10.3786986 9.3740166 1.6495235 4.2077679 8.9882390 10.7223053 11.1081657 9.4308625 15.5590443 9.9068906 9.5912839 7.3254602 2.4568587 15.2228985 9.4776393 12.2574109 12.6269616 10.0950350 10.0663003 8.5428044 10.1430781 0.06365200 -0.00097017 -0.00263220 0.04528200 0.01507500 0.65875000 -0.78218000 0.00027728 0.00972760 -0.61959000 -0.61959000 0.34655000 0.82637000 2.91430000 -0.00940460 0.00235810 0.00235810 0.01349200 0.00133840 -0.75072000 -0.00193990 2.12070000 -0.72146000 -0.70181000 -0.72170000 0.03326700 0.03326700 3.64590000 3.65690000 -0.00176230 0.06365200 -0.71737000 0.04528200 -0.00207840 -0.70190000 0.00319100 0.00319100 0.00027728 0.00027728 0.00444110 0.00152550 -0.02393200 -0.07654500 -0.72341000 -0.72341000 -0.03095000 -0.66217000 -0.53906000 -0.51063000 0.65866000 -0.73954000 -0.00290910 0.00166420 0.00166420 -0.00981850 -0.00193990 -0.65901000 -0.75582000 -0.75020000 -0.70181000 0.00041593 0.03326700 -0.68175000 1.29160000 -0.01050800 -0.00415460 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 0.643 0.643 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.723 -0.203 0.000 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 0.643 0.643 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.723 -0.203 0.000 8.4871306 13.2627167 5.0418212 9.6530206 2.1680322 11.5531963 1.2344400 NA 8.4696817 8.0588939 0.6494775 7.4242898 4.1413592 10.5214080 9.7658467 1.9714424 7.6095046 10.4139597 8.8467196 8.4176871 9.7477059 9.7632449 11.1684017 1.2344400 9.2184090 9.5167815 4.0418212 -1.3503386 9.6794801 4.0070519 12.2992080 12.8188014 7.9714309 10.5156226 8.7155921 8.4487845 6.1007149 -0.3505225 -1.3503386 4.3499455 7.9302737 10.1216858 10.0450369 5.1252378 8.2059320 8.1886615 9.8747101 7.1730645 8.7800732 -1.3503386 9.7409382 3.2344707 4.2344630 10.1264666 5.8206283 4.0418212 8.7007116 6.9937989 6.7369660 0.9714424 14.0292196 1.2344400 10.7445701 NA 7.6663114 5.3774223 7.8169209 8.6282133 13.166048 5.809373 8.946419 12.395912 11.523908 10.492246 13.121051 14.364312 9.386260 10.827234 12.807244 11.030775 8.940673 9.134326 1.971442 6.513688 12.916875 10.617089 8.024542 9.769741 9.458467 7.287360 9.713322 5.404389 8.813152 11.763408 5.075768 2.736973 5.704786 5.756039 9.946992 9.628928 7.571344 9.342990 10.478036 5.934906 8.141356 10.481997 11.248951 9.671871 9.775562 8.789054 1.819423 8.745954 6.098900 5.819428 10.583562 5.704786 10.275668 9.985451 7.629642 14.008908 11.061278 9.718281 12.094000 11.123716 8.633921 1.649523 TCGA-AO-A0J2 41 0 NA 997 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 6 3 1 NA 1 3 2 6 1 2 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.140267e-06 5.284165e-07 11.5224489 2.4366682 6.0713765 10.7373156 NA 8.6065869 NA 9.1392904 10.9743913 7.6461151 8.6044761 7.4319087 9.4042675 10.1638660 7.5810522 9.8029842 9.4109255 10.2551601 6.0652513 6.2867666 10.1075978 11.0467155 13.6203953 9.3580331 8.9839624 10.3438689 6.2601969 9.7361110 -1.8114725 0.7736588 8.6583765 9.8965250 10.9676330 5.9896341 13.1101106 12.8645262 10.2791778 6.7960643 4.5285838 5.2761989 8.0467153 7.6044761 5.5106613 12.4425081 NA 12.5483468 11.6571040 7.7811918 9.3597298 10.5410538 8.9602238 9.9622858 5.0342245 14.8940347 11.6308992 NA 8.7623817 NA 5.5016175 9.8167243 10.2006605 8.7821258 10.5416055 9.0690832 10.2930057 1.6481433 9.4301219 9.3791765 6.8926375 7.3486060 9.7713470 9.2262814 14.6078553 7.1789805 9.8112440 9.0389215 10.0172678 3.5810499 0.7736588 8.0057183 8.0263624 9.7881824 -0.8112193 5.7661631 7.3076753 11.4660219 7.9402784 4.5285838 5.9029804 4.9569209 7.4671841 11.9841654 4.4366616 13.5248575 6.2055430 6.4223541 11.0212290 14.2659049 12.1864432 8.4993472 10.7227941 10.1411118 9.3202829 10.9128220 3.5462895 10.4428774 11.2112757 9.3238024 0.1887807 10.3292447 9.2900536 2.3586494 2.1896348 9.7249817 11.6507254 9.8379907 9.1795476 15.3263461 10.5553300 9.3479752 6.7623820 -0.2263412 15.5814376 9.6254460 12.5844025 12.7679915 10.0827944 9.5664874 7.7142551 9.7272388 0.417310 0.426880 0.688120 -0.062764 -0.167900 0.400110 -0.050911 -0.508260 -0.534390 0.864530 0.864530 0.011679 0.463310 -0.509700 0.341450 0.031859 -0.500900 0.450540 0.390890 -0.090229 0.432600 -0.503080 -0.494650 -0.012438 0.891860 0.022024 0.332210 0.267810 2.059400 -0.092345 0.415130 -0.075878 -0.035585 0.462630 -0.528280 0.413290 0.388000 0.460750 -1.051100 -1.073100 -0.043195 -0.479340 -0.599060 1.756300 0.369040 -0.037762 -0.478180 -1.218200 -0.085457 -0.557770 0.509330 -0.511660 -0.524430 -0.524430 -0.052801 -0.534190 0.390810 1.055100 -0.552660 -0.473950 -0.533170 -0.470350 -0.488690 -0.514240 0.422670 1.640200 0.436 0.436 0.000 0.000 0.391 0.391 0.000 0.000 0.391 0.000 0.000 -0.495 -0.495 0.421 -0.533 0.268 0.268 0.754 0.754 0.000 0.000 0.000 0.000 0.389 0.000 0.000 0.000 -0.526 -0.526 0.382 0.382 0.000 0.000 0.000 0.401 -0.535 -0.187 0.000 0.000 0.301 0.436 0.436 0.000 0.000 0.391 0.391 0.000 0.000 0.391 0.000 0.000 -0.495 -0.495 0.421 -0.533 0.268 0.268 0.754 0.754 0.000 0.000 0.000 0.000 0.389 0.000 0.000 0.000 -0.526 -0.526 0.382 0.382 0.000 0.000 0.000 0.401 -0.535 -0.187 0.000 0.000 0.301 7.6685149 12.8929083 -0.2263412 9.5134775 3.7433211 11.9076954 0.7736588 2.2761989 9.9238673 7.5174096 1.3586776 6.2922848 8.4054802 11.0428237 9.3302030 4.2548208 6.4695051 8.2534774 11.0941215 11.0943095 10.2419069 6.8752345 10.3736098 -0.7069827 7.4366624 10.2930057 2.7737010 -1.8114725 11.0616017 0.9960995 12.4898734 12.9119688 6.9700944 9.5783659 9.9306228 9.6522588 6.3933064 1.7737010 NA 9.3011740 9.1008754 10.3760865 8.0326557 2.7737010 9.4441113 8.2695522 9.7433234 6.0467159 10.4522972 0.1887807 11.8172940 2.3586494 4.1194724 10.7425198 7.8753052 3.7433211 8.9668117 7.5151637 8.3244439 5.2548245 14.2785160 0.1887807 10.5103807 NA 9.6181412 4.0216219 8.0184573 8.9855852 12.1145133 8.0529207 9.1436577 13.1101106 9.9498702 11.9473741 12.4425081 6.8926375 8.2628761 10.1109472 12.9007778 11.0103092 8.0263624 7.8943667 0.1887807 7.5528689 11.9706064 11.6079046 4.7122986 9.8690941 7.8995412 4.3384815 9.7070730 6.6925597 6.8397858 9.3580331 10.3070267 0.9960995 9.2255950 9.9570430 11.8527373 10.8391131 7.9901840 9.4467116 8.3548977 5.3884065 8.7821258 9.8280752 8.9502858 8.9098337 11.0496275 8.4103216 -1.8114725 10.2207147 7.7781238 5.2221593 7.9402784 7.1283140 9.7720430 7.4671841 7.9960893 14.1752654 10.9855853 11.0793788 11.9743913 10.7017218 9.5010502 0.1887807 TCGA-AO-A0J3 67 0 NA 651 breast stage iib t2 n1b m0 2-10-2014 female 2009 NA NA other specify no 1 white not hispanic or latino 56.63.0 3 1 1 NA 2 4 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699824e-06 4.509738e-07 12.072251339 2.078575680 8.831091853 11.948747057 0.313013609 10.536789315 -0.008827391 10.063568464 11.500628446 10.952369607 10.558581620 7.823990681 10.103214491 9.717744787 8.785516550 8.663526084 9.566167280 9.628631447 4.849083528 2.313042641 10.156007715 7.308513781 13.409315816 12.363761865 9.233679588 10.837178815 3.798454952 10.664630743 -1.008972553 0.576086724 6.035494149 10.716467102 12.616892982 8.125527125 11.699645887 10.334564142 6.229505250 6.755971788 3.313028125 2.991100030 9.578409490 7.879844198 10.011038938 14.212234770 -0.008827391 8.706204860 15.253975624 -2.008682243 9.869431444 10.337614544 8.002327848 6.434044360 0.313013609 13.226277762 10.307806568 NA 6.870684050 NA 3.239031363 9.428852992 9.383418317 10.002328129 9.216308376 8.945297218 9.714335168 0.798423845 11.257594567 9.608568281 6.030020399 6.732567695 4.078567141 9.773689634 13.729984749 8.593975926 10.983862209 10.450532473 9.923315599 -1.008972553 8.785516550 8.006515713 8.727502897 9.680225182 -2.008682243 4.649310794 7.948203094 10.981913929 10.650427824 4.861464129 3.348657345 3.576062531 9.837374690 12.045959468 5.985454890 12.555905286 7.700184450 9.553343222 10.718383119 11.610174473 12.770255884 9.834236692 10.271581613 11.021940351 10.459470350 10.604199600 3.921836178 8.303983898 11.246424536 12.843045023 -1.008972553 10.838745471 8.921838260 -1.008972553 3.038120075 9.256715843 10.493186772 9.708348833 8.618634740 15.421724886 9.647525703 9.985100622 7.914428188 0.991100030 15.545427365 4.909965067 10.126168718 9.166650428 10.057526494 9.848304323 8.309643692 10.463690090 -0.5599700 0.8976800 0.0181680 -0.5648500 -0.0053992 0.5248400 0.2549600 0.0484040 -0.5732800 3.6569000 1.1180000 0.5900900 1.1396000 0.0582240 0.3088900 2.6012000 -0.5355100 0.0448570 0.5788600 0.0310140 0.5865000 0.0665150 -0.5117700 -0.4952700 2.5284000 -0.4736300 -0.4736300 -0.4736300 -0.0369460 -0.4796500 -0.5560700 -0.5269600 -0.5648500 -0.5633600 1.0285000 -0.0037395 -0.0215230 0.0484040 -0.5732800 -0.5699200 0.4051100 0.6417600 -1.2083000 -0.5589700 -0.5589700 -0.5435100 0.0957780 0.0582240 0.0582240 0.3088900 -0.5510600 0.0448570 0.0525250 0.0525250 -0.5763400 0.0610790 0.0665150 -0.5278800 -0.5117700 -0.4952700 0.0385890 -0.4736300 -0.4736300 -0.0369460 -0.1924900 -0.4453400 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 6.8828851 9.7001846 7.9640809 6.9394676 2.2121958 11.3345642 0.3130136 NA 9.1370329 5.8365907 NA 5.1173917 -2.0086822 11.1147373 8.9511028 2.7984653 5.2578856 9.6537693 5.4829547 9.1332080 8.5483923 6.4381847 10.0848485 -1.0089726 8.6573249 9.7143352 1.3130136 NA 12.0179700 2.9452893 12.4405074 11.6899140 5.8919684 9.4617598 8.8994935 9.1300124 1.7984653 3.5146651 -2.0086822 5.5835582 8.1956719 9.6837163 10.2888769 1.1610492 7.0536327 7.6776013 10.1178053 4.0996234 9.5882223 -2.0086822 7.3287225 0.7984238 5.6984602 10.0401257 6.3789035 0.3130136 7.0436693 6.7291925 2.8490785 NA 13.5253125 0.5760867 10.9503783 NA 9.0348116 5.3919808 9.0497691 9.0679164 17.096048 6.210270 9.469365 11.699646 9.905112 11.150341 14.212235 13.431451 8.483515 10.443085 12.724487 10.184626 8.727503 8.174736 -2.008682 8.754313 11.258180 10.9831540 8.2306992 8.2971625 10.7081345 8.1522326 10.8751969 4.4505316 4.5146651 12.3637619 6.6915411 NA 2.6915342 6.6545873 7.5166219 10.3242562 8.6975970 10.6978126 10.6712406 2.1610170 10.0023281 10.4497638 11.2238215 7.6564370 10.7623839 8.5656943 -0.4239133 8.9999425 4.0996234 2.5760625 10.6504278 3.8979955 11.8633909 9.8373747 7.0272746 13.1447716 10.3967742 9.6181786 10.9445698 9.8533507 9.8897021 -0.4239133 TCGA-AO-A0J4 41 0 NA 1587 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 56.63.0 4 4 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.977346e-06 5.897349e-07 12.8495598 6.0281337 6.8225504 11.5360531 -0.9719967 10.2253513 NA 9.5556116 11.7350623 8.5119503 9.3679845 8.6280474 9.4937010 10.3851367 8.0168194 8.9874121 9.8066224 10.4444043 8.5048809 4.3856864 11.0269013 12.7726531 13.5009206 10.4998098 9.5798429 10.7133214 7.5418625 9.9724770 7.7645366 0.3500446 8.8233625 11.6132145 12.7115679 6.6791859 11.9457864 12.0372634 9.5453118 4.3679860 0.6130601 8.3204562 8.4627628 9.1766113 7.5634098 3.8861111 -1.9719967 12.2137844 8.0725287 9.3330563 9.0180471 11.1170884 7.9214363 7.8876697 2.0281448 15.0551365 10.2730930 1.7285736 9.1320781 -0.9719967 5.5595163 8.6996755 10.5872726 8.9559126 10.0036243 10.0118408 10.5489988 4.2179596 11.1154317 11.4150749 4.6130955 7.0670535 2.1155993 7.4977768 16.6492600 8.2703561 11.1011046 10.8944476 10.5937128 1.6131073 -0.9719967 9.2333170 9.8123604 10.2145585 -1.9719967 4.5359285 6.5788814 10.2253513 10.7851078 5.5516975 7.0393622 6.1366590 10.0790036 11.8677321 -0.9719967 13.2125451 3.4204555 6.5711671 11.8588479 13.6468929 13.1128600 7.9721148 11.4893582 10.8800788 10.5935176 12.0246081 5.1049488 7.7146350 12.2804304 10.0491145 4.8861160 9.7696017 10.1603130 3.1980540 3.4557415 10.9376527 11.5904963 10.0632774 9.8350869 14.8738329 10.7106903 10.9303212 6.6647587 2.7285736 12.4272790 5.6428431 12.7624738 11.3941836 10.0677391 9.5531660 7.6520160 11.1743357 0.0871000 1.3980000 1.0458000 0.3015400 0.3164300 0.7975900 -0.3045100 0.1082000 0.7398600 -0.6120100 -0.6120100 2.9509000 -0.0069195 -0.1132500 -0.0209610 0.0394060 0.0394060 0.2212900 -0.4135500 -0.2126600 -0.1589900 0.6855200 -0.3995900 -0.3936800 0.2369000 0.2477800 0.2477800 -0.3582900 0.0846430 0.0871000 0.0871000 0.2471600 -0.3880600 -0.2604700 -0.4073800 -0.3934400 -0.3934400 0.0070826 0.2260700 -0.0381700 -0.4125600 0.0842090 -0.7378400 0.2872300 -0.4092600 -0.1030300 -0.1030300 -0.1132500 -0.3012600 -0.4026300 -0.2788800 0.2212900 -0.4017400 -0.3798800 -0.2254100 -0.1332100 0.0000000 0.6044900 -0.3995900 0.3249500 -0.4365900 -0.3657800 0.2477800 0.1913200 0.4412200 0.6293400 0.000 0.000 0.000 0.000 -0.181 -0.402 -0.176 -0.159 0.000 0.000 0.000 -0.400 -0.163 -0.287 -0.129 -0.111 -0.111 0.000 0.000 0.107 0.000 -0.139 0.000 0.000 0.000 0.290 0.290 -0.397 -0.397 -0.393 -0.393 0.000 0.000 0.000 0.463 -0.738 0.761 -0.409 -0.103 0.175 0.000 0.000 0.000 0.000 -0.181 -0.402 -0.176 -0.159 0.000 0.000 0.000 -0.400 -0.163 -0.287 -0.129 -0.111 -0.111 0.000 0.000 0.107 0.000 -0.139 0.000 0.000 0.000 0.290 0.290 -0.397 -0.397 -0.393 -0.393 0.000 0.000 0.000 0.463 -0.738 0.761 -0.409 -0.103 0.175 9.70497326 13.94662520 3.98232739 9.59133085 6.53592852 12.05802569 5.72857360 5.24730474 9.01610905 8.42901416 7.91077763 9.08477225 4.88611601 10.61074702 9.48140531 1.83547948 9.39281648 11.26639004 6.14707668 8.64008149 9.14806138 7.49573993 11.80959676 3.11559929 8.91535507 10.54899882 3.07253460 NA 11.00254916 4.33191298 12.45865250 12.72330850 7.12089206 9.95183342 10.19021112 9.50082535 2.61310727 1.72857360 NA 6.26175457 8.45335048 9.14837260 6.76960118 4.17787794 9.52177002 7.04772486 9.55756517 8.46276277 10.32074381 0.02814477 13.11845382 4.91077583 3.31353610 10.00976607 6.81747233 7.48961438 9.53245704 8.27843320 9.00970183 4.15741566 13.28216671 1.19805405 11.26355055 1.83547948 8.49879337 4.72857360 8.05604046 7.40099980 13.048588 7.499810 8.938777 11.945786 10.182636 10.838505 3.886111 13.171039 9.227194 11.541986 13.644683 11.716057 9.812360 8.196807 3.276065 8.531960 11.242606 10.618254 5.762843 8.927491 7.622459 6.237589 10.090852 8.253342 6.390078 10.499810 2.835479 3.115599 10.226580 10.143910 13.348477 10.762633 8.090181 8.149668 9.906185 8.427946 8.955913 9.938777 12.525986 12.485772 10.982331 9.701885 NA 9.528235 8.231813 9.277248 10.785108 9.102276 10.370243 10.079004 8.508198 14.348565 10.469004 10.378245 12.776380 10.789478 9.646520 2.420455 TCGA-AO-A0J5 48 1 792 735 breast stage iv t4 n1a m1 2-10-2014 female 2008 NA NA other specify yes 2 white not hispanic or latino 56.63.0 8 2 2 NA 3 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075399e-06 4.162835e-07 12.0160616 8.8385979 6.0661559 12.0426688 2.8091469 9.8557233 -0.2498223 10.3835493 11.8634508 9.7370414 10.0283135 8.2751193 10.0283135 9.7544718 6.5533067 7.9822726 11.3935062 10.0013391 7.3941077 0.4871776 9.7941899 10.9623423 14.2830130 10.5736185 9.1325152 11.1940582 5.4132149 10.2038649 -0.2498223 2.9201789 8.9441873 13.0019802 12.4430121 7.6082326 12.7714048 13.5435091 9.6020003 5.6571426 1.1653010 7.3965097 8.5239398 10.4019010 9.1862688 12.5397170 NA 10.0135205 14.9802342 0.1653010 9.2462261 10.7005641 9.2232804 9.0789263 1.3351974 13.6884219 9.3251602 3.2527487 8.8118476 -1.8349564 6.1019274 10.2747930 10.4084628 9.8889497 11.0793001 10.5952185 10.4090578 1.8657209 11.8033852 10.5581429 5.9790696 8.6491045 11.1562791 10.4206125 15.5669766 9.1701411 12.0181109 11.3123347 7.8674616 0.1653010 6.8199249 8.6571419 9.7044477 11.1463208 -1.8349564 6.2205718 7.4013028 8.9400757 11.3177321 7.5006794 6.3301962 5.1194848 10.2659511 11.7737746 4.8091469 13.5650006 5.6410228 7.4108414 12.1914664 13.5164351 12.8319566 8.0751818 10.8579043 11.2881168 11.1671983 11.4169191 5.3747404 8.3276802 11.6829582 12.0979649 -0.8346990 10.4431573 9.1296297 -0.8346990 3.1688987 10.0005496 10.7935065 10.0123462 8.6288133 14.9021135 9.6770415 9.8974561 8.5403284 3.0721744 14.7919960 7.2500975 13.3400585 11.7199975 10.2004315 9.6760530 8.5704303 10.5475562 -0.3019300 0.5640200 0.8404100 0.0012481 0.0043021 0.0087528 -0.1257700 0.0012481 -0.6326300 0.1767900 -0.1945000 0.0811770 0.0109820 0.0109820 -0.0526660 -0.0526660 -0.6237900 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0044411 -0.0134020 -0.6328600 2.7338000 0.0715350 0.0715350 0.0715350 0.0590800 -0.3044000 -0.3019300 -0.0087146 -0.6333900 0.0087528 0.0087528 -0.1257700 -0.1257700 0.0012481 -0.6229300 0.0029133 0.0000000 -0.0062854 -0.6387200 -0.3073300 -1.2431000 -0.3088200 -0.3088200 0.0109820 0.0109820 -0.0526660 -0.6237900 -0.0038779 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0044411 -0.7303800 -0.0134020 -0.6328600 0.0097515 0.0801680 0.0715350 0.0590800 -0.0111980 -0.0109220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 9.3680249 13.8921721 5.6328934 10.4364599 3.0726546 12.7133280 0.1653010 -0.8346990 8.2907022 7.9661888 NA 8.4353973 3.7198734 9.9226788 9.1737174 NA 9.7726191 9.6344217 10.4624916 9.2560629 10.1353227 7.7521284 11.3006774 3.8377112 9.1475695 10.4090578 4.3747404 -0.8346990 10.5037466 3.6247209 12.2316303 12.1142947 8.3686370 10.3006774 7.7763133 9.2593664 4.1876569 0.1653010 -0.2498223 1.7502635 9.1652887 9.4132162 11.0074427 5.6410228 9.5360416 5.6651341 10.3658809 6.0294750 9.9482871 0.1653010 12.1566335 3.5576061 4.4690720 9.6073976 5.0761400 3.7198734 9.5056953 9.8381560 11.0454462 -0.8346990 13.8376312 0.1653010 10.8210431 NA 7.4553075 6.3844574 7.8482837 8.5586794 12.333605 6.182096 8.479305 12.771405 10.588336 10.407272 12.539717 10.063512 8.509585 11.216479 13.258335 8.453001 9.704448 8.612372 0.165301 8.734195 12.402872 11.164232 6.657141 8.247438 9.354496 7.350164 10.620996 6.482701 6.819925 10.573619 6.956452 5.823500 4.823500 7.673242 12.053271 10.290379 7.943366 8.767988 10.391099 5.801914 9.888950 10.302600 11.669239 10.114386 10.514570 9.136114 -1.834956 9.034744 7.674925 5.809144 11.317732 9.282932 10.345350 10.265951 7.589455 13.696759 9.720837 9.995012 12.473770 10.811847 9.363120 2.557606 TCGA-AO-A0J6 61 0 NA 1140 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1 2.532391e-06 4.162835e-07 12.76938515 NA 4.91298511 11.58421222 -1.96973456 9.28890897 0.83770109 8.73078259 10.29067448 9.13494170 9.91298601 7.10448449 9.87896591 9.43495238 8.34095565 8.33183910 7.80018096 9.96292680 9.19462144 5.28773085 8.94846068 11.89239907 13.43042185 9.56074934 10.55708666 10.26096386 6.50201865 11.27589123 5.30646641 0.61532212 6.94323216 11.45293338 12.90925601 8.87190739 11.99197350 11.40116656 11.55022487 4.50607506 -0.96973456 8.94696883 10.21056299 9.15317098 6.86954696 5.23001467 NA 11.74104178 10.99287753 9.09036335 9.81997850 10.08698062 9.66106512 4.88832438 0.61532212 14.83275872 9.59687273 3.67420074 8.26516025 NA 2.73079210 9.34492612 9.42426960 9.97212425 9.61624447 8.42587719 10.04471213 1.03033608 10.26605810 10.34407627 4.31574735 7.79189415 0.03040671 5.25916324 14.48157016 7.99818873 10.96163447 10.79769978 10.91489507 1.48979980 -0.96973456 8.30879225 9.37685665 10.76208624 NA 4.07473662 7.57337453 11.07610262 8.73424660 5.04157155 6.92516037 3.70276835 9.76801275 11.74383689 4.29713271 12.74260125 4.48977412 6.09103968 10.92894431 14.59319651 12.49022278 8.35452357 10.85470510 10.86580131 10.37455005 9.80306991 3.88832438 7.52819466 12.43068875 8.55390494 0.35230655 10.38211040 10.17945494 0.35230655 1.92273067 9.19901513 8.24344726 8.86639339 9.53466531 15.45247344 10.97084007 10.19587808 5.83769857 0.03040671 11.85181801 4.09643054 13.16585185 11.67926223 9.54653548 9.27708348 7.52219624 10.26659038 0.43108000 0.65277000 0.02104300 0.48148000 1.10400000 0.00624810 0.13243000 -0.58853000 -0.62922000 -0.65501000 1.69440000 0.04188300 0.61643000 -0.07254100 0.00000000 -0.03274800 0.60088000 0.03495900 -0.00954260 -0.63510000 -0.62989000 -0.61479000 0.00762430 0.00762430 0.04287400 -0.01477800 -0.01406400 -0.01406400 0.00583090 -0.60051000 0.01950300 -0.40573000 -0.62503000 -0.62389000 -0.65873000 -0.63874000 -0.63874000 -0.58853000 -0.62903000 -1.29290000 1.52930000 -0.02041200 -0.65052000 -0.01574100 -1.29290000 0.00055459 -0.19081000 -1.02130000 -0.08890400 0.01014600 -0.58735000 0.03495900 0.58417000 -0.01601700 -0.63225000 -0.63074000 -0.62507000 0.01852300 0.00762430 0.00762430 -0.63991000 -0.01147300 -0.01406400 -0.26444000 0.58829000 0.48923000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 7.60777193 11.18294469 NA 8.01048279 2.87332106 10.66515397 0.35230655 4.94920807 9.16541078 7.57337453 -0.96973456 5.77180901 2.88832438 10.30413852 9.24587591 3.75826053 1.93723138 9.64597251 7.24223092 9.79976762 9.43085959 6.57337453 9.99792943 2.27828218 8.50911268 10.04471213 -0.38477206 NA 10.83002931 3.81170735 12.30697627 11.97706651 6.60398975 9.60114734 11.36055961 10.11879991 4.13886361 1.20025323 NA -0.38477206 9.48926214 9.32725914 8.08019129 0.03040671 10.04336200 7.96403352 10.58108974 4.99612658 10.36209966 4.53813460 10.44819551 4.77181165 3.73078123 9.70667473 6.50287157 3.23979517 9.24648243 6.94023606 5.56950324 10.50023909 13.94409724 0.03040671 11.80965194 NA 10.10314550 1.48979980 9.16861471 8.35001494 12.159552 8.872693 8.830434 11.991974 9.163485 11.106992 5.230015 9.464450 9.672846 10.445821 13.394375 12.278789 9.376857 8.007623 -1.969735 7.756561 10.848126 10.4537215 6.6039898 9.3064673 9.1576925 9.5371464 9.6179143 7.8376979 2.8377011 9.5607493 3.1596292 0.8377011 8.3341235 10.1430301 12.3535385 10.9547843 8.1983630 9.4015750 7.9266755 5.4226602 9.9721243 9.6482695 5.2687488 9.6890007 10.6802727 7.8457265 NA 9.5162981 5.8441245 4.8376960 8.7342466 3.7852262 11.1193001 9.7680127 7.5181826 14.0406088 10.0373703 9.6260667 13.1174743 10.7546436 9.2597626 0.3523066 TCGA-AO-A0J7 71 0 NA 618 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA other specify no 3 white not hispanic or latino 56.63.0 3 5 3 NA 2 4 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 5.562279e-08 11.0844764 3.4250698 6.2663780 11.8492413 -0.4817670 9.7011994 4.0417424 9.7080091 11.4772808 7.8423648 10.1976645 6.4370479 9.6181896 9.1548090 6.5625783 8.4235714 10.4054051 8.8888717 6.0804274 0.1031283 9.9771036 10.1153059 13.4515062 8.4592320 8.8535747 10.8831398 2.7661075 10.0573384 NA 5.1031451 6.2929713 9.7954718 13.3229709 6.1976649 12.9228603 12.7229848 9.1374874 6.3125998 4.2461040 4.6056484 7.2630184 10.4441097 6.3190850 13.4201355 0.1031283 10.6432749 14.3084056 5.3636757 10.4103857 11.2029331 9.0230033 6.9857896 -1.4819685 11.7722697 7.6980934 2.2186262 7.7445964 -0.4817670 2.6056366 10.2229527 10.4429970 10.6551755 9.9481142 9.3020012 10.0446837 NA 10.3028193 10.5329023 6.8082035 7.6679319 4.2461040 12.1945823 14.2678706 5.7102802 11.6647531 10.8162470 6.9062015 1.9776096 4.4954649 7.4868511 8.9528126 11.2840920 -0.4817670 5.4250766 7.6293202 11.3751935 9.9688802 4.4489208 3.6056484 4.9105024 10.4198056 12.7138642 3.2730682 13.6005830 6.9528123 8.5405524 10.9719695 11.9535942 12.9006734 8.4280775 9.9481142 10.4239475 10.1252974 10.4843293 5.1906109 9.4031181 11.5302851 10.8505007 NA 10.3154407 9.3846907 -1.4819685 3.7276373 9.1429798 11.3939338 10.5195926 9.2789043 14.6771096 10.8096430 9.8139533 8.4548224 -0.4817670 15.1408655 6.1475408 12.3714940 10.3275506 10.5058037 8.8602592 8.4023551 10.6684299 -0.542290 0.423010 0.423010 0.449180 0.451780 -0.543810 0.435130 -0.561070 -0.561070 0.444600 0.444600 0.444600 0.000000 0.012934 -0.553870 -0.556180 -0.556180 0.234730 0.221530 0.216680 0.433280 -0.551660 0.373800 0.373800 0.373800 0.320930 0.320930 0.320930 0.197480 -0.562390 -0.542290 -0.049559 0.440230 -0.543810 -0.543810 0.435130 0.435130 -0.561070 -0.561070 -0.561070 -0.559870 -0.559980 0.444600 0.451390 0.451390 0.420230 0.420230 0.012934 0.012934 -0.553870 -0.556180 0.234730 0.221530 0.221530 0.216680 0.433280 -0.551660 -0.553620 0.373800 0.373800 -0.301690 0.281270 0.320930 0.213300 -0.552860 -0.309210 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 7.6293202 13.4302317 5.8757358 9.0993849 3.5625844 10.0050194 1.9776096 NA 8.1923767 7.8513399 NA 7.2220877 2.6056366 10.7592738 10.0960852 2.5181826 5.6980934 9.5209995 9.3494916 10.0524874 8.5795151 8.2896740 9.5612118 0.5182330 11.3030237 10.0446837 1.1031283 -1.4819685 10.6122621 0.8401208 13.4790914 12.2012887 6.6474671 9.1319740 6.4781872 9.9211965 5.7661128 0.5182330 1.3255591 9.4789103 9.6116019 9.4038808 8.9158591 2.6881132 7.5068693 7.6830915 11.1737152 4.3761653 9.8845067 NA 13.4095884 2.2186262 3.0417511 8.9654848 6.9722366 0.5182330 8.5011780 6.4665521 3.8757408 NA 14.2517294 -0.4817670 10.8082033 NA 8.5680329 3.2730682 5.9857896 9.7607632 11.581977 5.884508 8.179962 12.922860 10.606310 11.015288 13.420135 12.569818 8.557103 10.576514 13.158994 12.362596 8.952813 9.200301 -1.481969 8.132895 10.837857 11.1618152 7.7755721 8.3077181 9.7172432 9.7761614 11.1054978 4.6474699 8.4868511 8.4592320 5.0100368 1.6880908 6.7943093 8.1078170 9.3746100 10.6808904 9.6755314 8.3223153 12.5033148 3.3255447 10.6551755 11.7376555 11.3650460 9.0641141 11.0390486 8.1656427 NA 8.2638588 5.6267078 2.9776096 9.9688802 5.8580332 10.8409576 10.4198056 6.9486371 14.0470048 10.3585690 9.8691236 12.3312641 10.3966186 9.6956040 0.8401208 TCGA-AO-A0J8 61 0 NA 680 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 56.63.0 5 5 2 NA 3 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.946798e-07 10.8913413 5.2221477 6.3338960 11.1655273 -0.4119630 10.2188149 -1.9971175 9.6066049 12.1729819 11.2323983 9.7855674 8.3517069 8.8741139 9.0343351 7.6912292 9.9502503 10.7655683 9.3839807 6.9307563 1.8103197 10.1209463 9.3322143 8.4958334 10.9929053 9.3294082 10.4310771 6.0473726 10.4247674 1.0029545 1.4624188 8.0364017 10.8067061 12.4463107 6.6468352 13.3198612 13.1033946 9.1476369 7.9945005 3.2124293 6.1062667 7.9730843 10.2961629 6.9158674 13.3002532 2.5879410 11.2159309 14.1548474 7.3605302 10.0277721 10.8690984 7.8733432 9.8993110 NA 13.9615359 10.9549918 2.1729035 7.4624107 13.8923875 3.6176864 10.1800867 9.7103377 10.4657365 11.1522494 9.5770991 9.3899189 1.1729355 11.2069383 10.1248359 7.2580072 9.6802579 -1.9971175 10.3533654 14.4035412 7.7421518 11.6399430 11.1495473 8.6103088 0.8103197 5.4787130 9.5450432 8.1866140 11.5511985 -1.9971175 6.1678858 7.7511718 9.1141143 11.0996938 4.8103351 6.2837496 5.2026528 10.3643741 11.8105348 2.3248970 13.3525018 7.3627285 6.9484221 11.4448853 13.1447665 12.9050711 8.9432922 9.5642665 10.9412718 10.6682568 10.9186713 5.3067580 8.5926297 12.0226562 9.9838323 -1.9971175 10.3561254 9.1361209 1.5879410 2.5082258 9.2251698 11.2044900 9.9053538 9.5382539 15.0202220 10.1998881 9.4654809 7.8932427 2.1729035 15.0155486 10.7589093 13.7041768 12.3579167 10.7429702 9.6634202 8.6341558 11.4637775 0.79329000 1.36720000 1.36720000 0.00064569 0.00064569 0.00258810 0.00564420 -0.76999000 -0.76195000 0.00156530 0.00156530 -0.00517020 0.00564420 0.00564420 -0.03349900 -0.03349900 -0.03349900 -0.00461700 -0.00461700 0.00793700 -0.00101770 -0.00129480 -0.00262880 -0.00262880 -0.00262880 -0.00323340 -0.00323340 -0.00392530 -0.00627600 0.00092306 -0.00046340 -0.01083100 0.00064569 0.00258810 0.00258810 0.00564420 0.00000000 -0.76999000 -0.76195000 -0.77331000 0.00161660 0.00161660 0.00156530 0.00286570 0.00286570 0.00286570 0.00578320 0.00564420 0.00564420 -0.03349900 -0.03349900 -0.00461700 -0.00337180 -0.00337180 0.00196000 -0.00101770 -0.00129480 -0.76221000 -0.00262880 -0.00262880 0.00369890 -0.00323340 -0.00392530 -0.00627600 0.00620040 -0.75464000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.712 -0.050 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.712 -0.050 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.541167490 13.831065521 6.058260207 9.958628546 4.042775645 10.650661896 1.002954498 NA 8.708611110 8.071756771 0.003026483 7.489693048 2.957171707 10.378832596 9.433953839 1.462418837 8.022569221 9.273273897 9.892482558 9.876807145 9.953622027 7.351706942 10.449286613 3.132264252 9.974881311 9.389918882 2.587940994 NA 10.791289160 1.703410828 12.642601965 12.270204235 7.371484809 9.113461933 9.531432734 9.336693105 4.823158305 0.587940994 -0.997117491 5.764529283 9.210603164 9.525560155 9.587941181 2.860962798 8.858602402 5.797394359 10.524333670 5.518679905 9.364374136 NA 12.559963586 3.090446980 3.250900955 9.832404130 7.490295748 3.212429265 9.407587926 7.331653271 5.632335113 1.324925784 13.977236359 -0.411963028 10.122568286 NA 8.580407447 4.757865995 7.606605085 9.232398381 13.069330 4.945495 8.423992 13.319861 10.575916 11.362591 13.300253 12.086209 9.347829 10.951528 13.627774 8.901580 8.186614 9.233600 -0.411963 7.322651 11.258007 10.976497 7.747812 8.967319 9.287803 8.133549 10.323793 7.058261 7.369301 10.992905 7.047373 3.288388 6.246153 6.351706 11.535335 10.587002 8.549873 8.594501 12.337601 5.260368 10.465736 10.806504 10.311886 8.985972 10.982582 9.086458 -0.411963 9.372080 5.985972 5.025348 11.099694 6.983118 10.413078 10.364374 7.677171 13.955265 10.418456 10.547943 13.435227 10.227885 9.447476 2.324897 TCGA-AO-A0J9 61 0 NA 1613 breast stage iiic t2 n3 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma no 15 white not hispanic or latino 56.63.0 8 2 3 NA 3 4 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.116108e-06 4.85664e-07 11.2320446 7.9768980 7.3433474 11.0103030 2.8730257 9.6860957 NA 9.4926357 10.4901884 9.9480606 10.3150491 7.6308801 8.5626370 8.9815516 7.3469587 9.5626370 8.5088462 10.1604830 8.0205150 5.0429507 10.7327345 10.2682042 9.2701075 9.2710582 9.6803820 10.3926633 7.6009476 10.3733158 -0.2968993 4.4310212 9.8560207 12.0845099 12.7079371 8.7892382 11.5156806 13.6317130 10.5124684 7.0159848 -0.2968993 7.8879773 8.6960404 9.6753640 7.6775167 12.6815445 2.4035404 12.4081945 13.7922215 6.7799176 10.7055656 9.9137735 10.4305972 4.3178105 -1.2968993 13.7617624 10.2672373 3.9885029 7.2148543 9.5248761 4.3469569 7.7199104 10.5726960 9.5564118 10.9763149 9.0114411 10.2374050 3.0250288 10.1838924 9.8960114 4.4579882 7.4646536 3.7905635 10.5815363 15.0347889 6.8851485 10.7805855 10.5826854 9.4663145 2.7031007 -1.2968993 8.8362445 8.5811531 11.5935564 NA 6.1377310 6.7310081 11.2325327 11.7174714 4.8730257 6.3613139 6.6974555 10.4070058 12.5207854 5.3613122 13.9127840 5.5857437 7.4745918 11.4602838 11.7807524 12.5867001 8.4579898 9.6732080 11.1475994 10.4224910 10.4844618 3.2266627 9.0462878 11.4162738 10.5922258 1.5104556 10.6875206 7.9838732 -0.2968993 3.6605522 9.2890035 11.6118700 10.1251669 8.9698887 15.3472964 9.7206065 9.0551455 9.0250302 2.9510282 13.8760374 6.9271036 13.3002818 12.0068829 9.7379012 10.4130476 7.5200859 9.7625277 0.00232990 1.01050000 0.99954000 -0.00484610 -0.00484610 -0.01202400 0.66427000 -0.00622860 -0.00622860 -0.33595000 -0.33595000 -0.33595000 0.01000600 0.35862000 -0.32368000 -0.32368000 -0.32368000 0.63993000 0.63993000 -0.00097017 0.01642500 -0.25783000 0.04103400 0.04103400 0.04103400 0.04244900 0.03693800 0.03693800 0.39463000 -0.30228000 0.00232990 0.01070300 -0.00484610 0.02777800 -0.01202400 0.66427000 0.66427000 -0.00622860 -0.00622860 -0.00622860 0.00000000 0.00000000 -0.33595000 0.36070000 0.36070000 0.02701600 0.02701600 0.35862000 0.39147000 -0.33352000 -0.32368000 0.63993000 0.63993000 0.63993000 -0.00097017 0.01642500 -0.24496000 -0.32396000 0.04103400 0.04103400 0.00554090 0.04244900 0.03693800 0.39463000 0.01098200 -0.30944000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.997 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.997 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 9.3260690 12.3211434 5.7799189 10.3742008 2.4189995 11.0045984 1.8730257 1.5104556 8.6703284 9.3746433 NA 8.6323606 6.5296507 10.3944094 8.8929268 3.0954181 8.6932061 8.9581307 7.1989567 10.3613136 9.0722958 6.6219654 12.7565190 3.0954181 8.0672370 10.2374050 6.1293675 0.7031007 10.9815516 2.9510282 13.6518344 11.8428134 8.7971797 9.7310081 8.8654936 10.1676480 4.4035404 3.9125541 1.0250288 8.6485460 8.6129953 10.5517251 9.4621581 8.6558434 6.8371182 6.8323850 10.3447024 5.8426546 9.5895609 1.8730257 11.0085940 -1.2968993 5.0250288 9.8826443 6.1239041 3.9125541 9.3406326 8.5811531 6.9604897 2.0250288 15.6961290 1.5104556 10.3662154 NA 8.4173475 7.0473977 8.2128772 8.7664971 10.829600 5.941508 8.246134 11.515681 10.458407 11.177822 12.681544 10.102914 8.547023 10.273907 12.868637 9.833029 8.581153 9.914382 5.042951 6.857920 11.397460 11.036817 7.965197 8.965174 9.255771 7.969889 10.244784 7.272958 8.732389 9.271058 7.047398 3.162532 5.573465 7.569082 10.376853 10.830129 8.190942 9.225684 9.828516 5.444568 9.556412 11.189686 10.675005 9.470459 10.690721 7.639740 NA 8.836604 7.152788 5.375526 11.717471 6.837528 10.595265 10.407006 7.389603 15.472927 10.346056 10.700987 12.228133 10.772216 9.871774 1.288063 TCGA-AO-A0JA 36 0 NA 655 breast stage iiic t2 n3 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 11 black or african american not hispanic or latino 61.60.0 2 2 2 3 NA NA 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.668684e-07 11.24023346 7.77171989 7.42570183 11.23157497 2.58539524 9.79884859 0.08283881 10.66440097 11.77796979 7.99177975 9.93463562 8.17740409 9.12819105 9.28990085 5.26610813 9.39122554 10.16725204 10.13409551 7.24946810 2.30527016 9.30688832 10.12043346 13.62378142 10.94939274 8.86424620 10.82126034 5.54231687 10.84304928 -0.50205558 0.49794442 8.73632886 12.49351454 12.25520987 7.33081382 12.29761041 13.75785116 8.99177947 7.42570183 4.81985208 6.76001864 8.89773596 9.28582664 8.19662868 12.84215058 0.08283881 9.79598654 13.16708593 4.62720993 8.10525430 11.33811188 8.44775068 6.58007311 -1.50225991 14.11246855 11.81347130 3.19836842 8.78563653 0.08283881 4.90731372 10.43750325 11.05059311 9.79082074 11.82126034 10.42496123 9.75707877 1.30527016 11.85959372 10.35006336 5.89024239 9.03611288 13.77346660 11.44866220 15.06470650 9.56208746 11.29781274 11.23517142 8.99377907 -0.50205558 4.83777172 9.45212034 9.33791509 13.68093905 NA 6.45212096 6.95735514 9.25281159 11.01288463 5.09783831 6.63234966 5.33081293 11.27866887 11.98513603 4.33081651 13.45828805 4.76471239 6.36211040 12.51751478 13.58144492 13.06558310 8.82097893 10.93098779 10.85904537 10.50553658 10.91313767 5.21216853 8.73513390 12.71011643 9.45792605 -1.50225991 10.31650624 8.45792584 2.19836842 3.62761851 9.46587083 10.75590112 10.42829181 8.98576397 15.48544344 9.69636912 9.56670234 6.90731493 1.81987252 14.57179364 9.83554596 13.60644850 11.53512779 10.33870196 9.58140341 8.55320650 10.88392119 -0.65848000 0.62018000 0.59999000 0.03242200 0.00917050 0.00218630 0.00917050 0.00000000 0.00000000 0.66493000 0.66493000 0.01064000 0.00573840 -0.64790000 -0.66003000 0.01474900 -0.66040000 0.00221930 -0.01155800 -0.00013862 0.01782400 0.03521100 -0.63897000 -0.63897000 0.02707600 -0.00221680 -0.00221680 -0.00221680 0.03721700 -0.61383000 -0.65848000 -0.01037000 -0.65640000 -0.01188700 0.00218630 0.00917050 -0.00083160 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.66493000 -0.64959000 -0.65480000 0.01684500 0.02848100 -0.64790000 -0.64790000 0.01670500 -0.65892000 0.00221930 0.00319100 0.00319100 -0.00013862 0.01782400 0.03397200 -0.63311000 -0.63897000 -0.63897000 -0.66633000 -0.00221680 -0.00221680 0.03721700 0.02848100 -0.61777000 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 8.97568234 13.61617572 7.34027473 10.41417677 3.38203083 11.48020462 2.81985208 -1.50225991 8.23263390 7.47806337 NA 9.52521501 1.95735747 10.71800005 9.16414793 1.30527016 9.10340348 9.36751784 10.27682255 10.85217343 10.16553677 7.81985208 10.39236294 3.35590428 7.59858629 9.75707877 2.89023266 -0.50205558 10.63811476 2.81985208 11.65068420 11.33200000 8.35434945 10.30729031 8.68898319 9.39803606 4.52029023 1.95735747 0.81983165 1.95735747 8.81194074 9.42050851 11.17740415 4.66784672 9.35369578 5.79254565 9.65084263 5.73632886 9.80170480 NA 12.42533352 3.95735747 3.78333092 10.19051770 5.77674621 6.07535292 9.82210457 8.57072666 9.37750728 0.08283881 13.47032053 0.08283881 10.50565219 NA 8.27928370 6.10525483 8.30527882 9.59595618 13.0088736 5.3052775 8.7255401 12.2976104 10.5060024 10.6568492 12.8421506 12.0115283 8.6489407 10.8902039 13.5148629 9.2258444 9.3379151 8.0057189 -0.5020556 7.1236331 11.6358758 11.460097 9.053472 8.436034 9.187048 8.077240 10.995871 6.953251 8.924189 10.949393 7.803986 3.989775 5.368290 6.808718 11.342826 10.878385 9.414550 9.123633 12.566786 5.463707 9.790821 10.701884 10.954535 10.063978 11.085467 9.011652 NA 9.156341 7.374226 6.707377 11.012885 8.015593 10.233903 11.278669 7.029306 12.740726 9.406317 10.124546 12.495192 10.829121 9.410065 1.497944 TCGA-AO-A0JB 50 0 NA 1542 breast stage iiia t3 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 61.60.0 2 2 4 1 1 4 2 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 1.699824e-06 3.815932e-07 10.8041001 5.4964496 5.4062543 11.6633367 1.4520682 9.2268437 1.4520682 7.8783213 10.4688650 12.1394324 8.6269822 7.9439096 8.2529568 10.7930194 7.0519691 8.9950885 9.6712252 9.9795337 7.3100374 5.3589483 11.9479117 10.8550687 12.3392773 10.0388965 8.9073840 10.2658379 6.7374583 10.2002496 2.7739752 0.4520682 6.5813392 12.4653794 13.3497131 6.9114879 12.0142991 13.0584619 10.5248592 8.5127527 2.4520682 7.8357612 8.6517291 8.2722355 7.9598513 11.9533963 1.4520682 11.5864830 13.7927413 5.1524958 10.7677950 10.9667708 5.4520550 7.3346997 4.6999846 13.3649535 11.8276392 3.6219815 9.2432197 NA 4.3589448 7.7094444 8.7603956 8.9114882 9.8991400 8.4854796 10.0686055 1.4520682 10.3453582 10.1156148 7.6119278 6.2594119 12.7258523 11.2746275 14.2731331 6.5239477 9.5813398 9.2690404 8.8614477 2.4520682 NA 8.2136078 7.4062526 11.2626283 NA 6.1524958 7.5500888 9.4407413 10.7974620 8.2268437 4.0370219 4.4520550 9.6952307 11.9970211 2.4520682 12.8161913 5.7739858 7.3827943 12.3297243 11.3430809 12.4995215 7.6517291 10.6344511 10.0959128 9.4771963 10.9368796 3.0370132 9.6244842 11.6424987 10.0162062 3.4520550 9.9834381 8.6468136 0.4520682 5.0959118 8.6760583 9.9795337 10.4548717 8.5916080 14.9565654 10.9114883 9.3619497 7.4632840 2.0370307 14.1152812 10.0370192 12.3177900 12.1888814 9.3945712 10.5019052 7.7374590 9.6271322 0.00869270 0.51761000 -0.70383000 0.69373000 -0.03931600 0.00563190 -0.67641000 -0.00028722 -0.00324560 0.10054000 0.00768570 1.81200000 0.02182300 0.02701500 -0.68733000 0.04168000 0.04168000 0.05459900 -0.00255350 1.28040000 0.03518800 2.16600000 -0.67218000 -0.69387000 0.63181000 -0.00753150 0.00000000 0.00000000 0.69364000 0.00869270 0.00869270 -0.67411000 -0.63995000 -0.67522000 0.00410330 -0.00849810 -0.70212000 0.03988900 -0.00324560 0.02940500 0.60459000 0.61998000 -0.68090000 -0.38933000 0.03489900 0.03489900 0.03489900 0.02701500 -0.66859000 -0.67907000 0.01622500 -0.00311920 -0.70059000 -0.66794000 0.39724000 0.01678400 -0.67531000 -0.16388000 -0.67218000 -0.69387000 -0.67595000 -0.00753150 0.00000000 -0.02294000 -0.68058000 -0.58994000 0.000 0.000 -0.679 0.000 0.000 0.000 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 -0.679 0.000 0.000 0.000 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 8.5288721 11.8609171 6.0066459 9.2399593 3.7739858 11.5560001 3.9114903 3.2594081 8.8400739 8.5073392 NA 8.3247008 4.4520550 11.2497182 9.4492362 3.2594081 7.5073388 8.4964508 8.7784862 13.7211834 8.9623460 7.5500888 11.2276670 1.4520682 8.3709201 10.0686055 8.1935239 NA 11.4098842 3.4520550 14.3827940 13.2580020 8.0142989 9.4548717 8.1935239 11.4548717 4.0370219 0.4520682 NA 7.5181456 9.2529565 12.5151147 8.9638093 5.8783207 7.4469757 9.2301338 9.9931532 5.3589483 9.5154517 1.4520682 13.0763952 NA 4.3589448 9.9630384 7.5706861 3.7739858 8.7649396 7.7281811 10.4646812 6.3827935 14.8819211 NA 10.7512647 NA 9.4464101 6.2594119 7.7829733 8.2849467 12.153991 6.259412 8.844374 12.014299 11.698797 10.457681 11.953396 12.858262 8.840074 9.510048 12.463983 11.072277 7.406253 8.915581 4.452055 7.998951 9.835761 11.032315 4.152500 8.601652 8.534206 5.037018 10.364976 6.621982 8.117393 10.038896 7.081413 1.452068 8.193524 7.990517 10.403341 10.433624 8.316243 11.297547 8.626982 5.310038 8.911488 10.812904 10.117393 10.090493 10.896036 6.791907 2.452068 9.051226 6.925356 6.661510 10.797462 5.310038 11.455202 9.695231 7.927790 15.868161 10.423600 10.427905 11.293621 11.584556 9.735145 3.259408 TCGA-AO-A0JC 64 0 NA 1547 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 61.60.0 7 2 2 5 2 4 3 3 3 1 NA NA 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 5.562279e-08 10.8196646 8.4139169 7.6381600 11.2844240 0.8084262 11.7778239 NA 10.1343049 11.8944077 12.3575000 9.5674934 9.1337428 7.9169620 9.2283976 7.0705321 10.7903614 8.7971220 11.1679124 9.4008944 8.5140698 12.2441076 9.0276058 10.8623632 11.5030129 10.4018285 11.1278272 10.0863058 10.3226583 1.6157929 -1.1916561 11.2053097 10.5979710 13.5246138 7.3971518 10.0197173 10.5716497 7.5930721 5.6157929 -0.1914914 6.0938390 9.7655394 7.5699885 5.4377937 10.5431470 NA 12.3593044 11.5674933 2.8959036 10.3961914 8.4323189 6.4949372 4.6664158 1.6157929 15.2415947 11.4673183 2.8959036 9.3231514 2.5088850 5.6664186 10.1218873 10.0599198 9.9306182 11.7615425 10.1365512 10.8196646 5.3630274 11.1170608 10.7388051 5.5226835 7.9556424 2.7153223 9.8049109 14.7508144 9.4750962 11.3816111 10.4679874 10.5001809 0.8084262 -0.1914914 9.5010529 9.4594890 11.3950426 NA 2.1303708 7.0324392 11.7536983 11.1733928 6.1122185 9.8308051 5.4083518 11.0542871 12.4146112 NA 13.4897856 4.8958988 8.2305023 11.0411581 10.1883572 13.9861683 5.8852522 9.3132563 10.7358450 10.6523662 11.4090472 4.7391730 8.5897972 11.8735168 9.8885886 NA 10.3451702 9.3475961 2.8084468 4.4511386 10.7280456 10.8238524 10.7892910 9.3678144 15.2154395 10.3915201 10.1996809 9.4286573 3.0563581 13.5203731 6.7332499 13.3177175 13.7352893 9.9441466 9.5175212 8.7928557 9.8776185 0.00416340 0.09521700 0.09521700 -0.00360110 -0.00360110 -0.00442340 0.10804000 -0.00013862 -0.00401620 -0.00069303 -0.00069303 -0.00069303 0.00388540 0.00388540 0.00000000 0.00000000 0.00000000 0.00819590 -0.00290910 -0.00055444 0.00569190 0.01195300 0.01307400 0.01307400 0.01307400 0.01416500 0.01029800 0.01576600 0.01153900 0.00416340 0.00416340 -0.00429290 -0.00360110 -0.00447360 -0.00857760 0.10804000 0.10804000 -0.00013862 -0.00401620 -0.00401620 -0.00138580 -0.00138580 -0.00069303 0.00708260 0.00708260 0.00708260 0.00708260 0.00388540 0.00388540 0.00000000 0.00000000 0.00138680 -0.00290910 -0.00290910 -0.00055444 0.00569190 0.01558700 -0.10434000 0.01307400 0.01307400 0.00750000 0.02749700 0.01576600 0.01153900 0.00805670 0.01824300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 12.9547674 10.7328788 0.8084262 8.7287902 9.6971198 10.1953776 10.4377940 0.3934162 8.8446110 5.9883461 -0.1914914 6.6349853 2.6157929 10.0221492 10.0081097 4.3002922 11.6312073 8.3002903 8.8154646 9.4540959 9.3306364 8.0705321 10.5881567 3.9377210 7.1076450 10.8196646 4.6910819 NA 11.8975567 3.8084365 14.0754800 11.8919167 7.3042920 10.4194621 10.1252846 9.0456472 4.0178863 3.4522923 0.8084262 3.9377210 8.8459842 9.9428637 9.2399350 5.5226835 4.8347972 6.2430654 10.4997447 4.1303626 9.3407932 0.3934162 9.0810671 5.6788015 4.7857179 9.1390855 4.9559497 10.5815766 10.1064999 9.7480165 10.0300245 5.9982610 14.3814928 4.8084365 10.3162320 -1.1916561 9.2167672 5.8852522 7.4949380 8.4102079 11.206275 6.183477 9.094995 10.019717 11.333958 10.009336 10.543147 10.164889 9.423147 11.101047 13.489676 10.566661 9.459489 7.750952 2.393389 8.008110 11.451617 10.459938 4.200755 9.191061 9.681881 8.415768 9.817405 11.330038 9.808437 11.503013 6.308283 1.978379 4.393402 8.832427 9.634191 12.423377 7.879900 8.410208 10.266331 10.505405 9.930618 11.012703 10.107645 10.568326 10.646853 8.247229 NA 10.531940 9.030025 11.875031 11.173393 5.437794 11.726928 11.054287 8.089278 14.772327 10.102484 11.304043 12.151623 11.373301 10.318707 4.589799 TCGA-AO-A0JD 59 0 NA 2190 breast stage iiia t3 n1a m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 61.60.0 6 3 1 2 1 4 2 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.030232e-06 4.171709e-07 11.4770152 3.6772602 8.3530070 10.8451183 NA 10.1761653 NA 10.4171373 11.6340179 8.4586170 9.1482152 7.7771468 7.5926095 10.2031237 6.5897949 9.2586796 9.9340905 9.9223907 6.3579795 4.3177165 9.2063433 9.2569062 13.0159938 10.9108771 11.4483585 10.6355543 5.2622189 11.1015473 0.5897635 3.5897994 7.4321452 11.7248625 12.5245304 8.6799069 12.1920295 13.0817103 7.5056742 3.5897994 NA 4.3177165 8.7177888 8.3177151 6.1211771 12.7620658 3.0492300 9.0265060 13.1334910 4.7597204 9.0356888 11.1032755 5.3040400 7.2971538 1.1747260 13.1088657 10.9790468 0.9117299 6.5381625 3.2336580 3.2336580 9.9810382 10.8711451 9.5461708 10.9001234 10.5756365 8.8647551 0.1747899 10.3963443 9.6491390 5.0327400 7.3513456 -0.4102365 11.4851806 13.9153109 6.9445727 8.3546664 11.0379109 8.2988782 NA NA 8.5613380 9.3662276 13.5038994 NA 3.1133504 7.7968086 9.4830961 8.6245937 6.3906952 5.6450762 4.8935758 11.2600082 12.4541742 -1.4100448 14.1823976 3.9117203 6.4906616 11.2884992 11.1482153 12.5890900 7.6121623 10.3138821 11.6845321 10.3329460 10.9387993 5.2304720 8.8901472 12.4279152 10.4364602 NA 10.3409202 9.3825849 1.1747260 2.9138947 9.4155485 10.8013787 10.6464323 8.9117227 15.0805985 9.9991856 9.9190303 6.9296443 8.1691108 15.5878120 7.5026838 12.4556245 11.1008059 10.3104663 8.2354528 8.7906932 9.6566642 -0.4952400 0.1592500 0.7329000 0.0485900 0.0000000 0.1174600 0.0246320 0.1000600 0.0071387 0.1422600 0.1422600 -0.4957600 -0.0449150 -0.4898100 0.3913600 3.1799000 -0.4830900 0.1329200 0.1329200 0.0013824 -0.0480290 0.4975800 0.1872700 -0.4559400 -0.4695800 -0.1020600 -0.1020600 -0.4858300 0.1774200 -0.2798500 -0.5005600 -0.4627700 0.0485900 0.1174600 -0.2307600 0.0246320 0.0501530 -0.5477100 0.0371210 0.5870900 0.1670500 -0.5492200 -0.0254740 0.0446180 -0.5078100 -0.4733900 -0.4544400 -0.9425900 -0.4861400 -0.4845700 -0.4998500 0.1329200 0.1349900 -0.4889700 0.0359910 0.1489500 -0.1506300 -0.4606400 -0.4474600 -0.4559400 -0.7145900 -0.1020600 -0.1458800 0.1507600 -0.1859300 -0.4532600 -0.484 -0.484 0.000 0.000 0.133 0.133 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 -0.484 -0.484 0.000 0.000 0.133 0.133 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 8.0055364 10.9574823 7.5954194 9.2675143 3.8752001 10.7830119 NA -1.4100448 9.5279039 7.6799072 NA 6.2345875 4.3971526 10.9434928 9.1915654 1.1747260 7.0034223 10.3575652 10.2475597 11.2869794 11.1536677 6.3842104 9.9351998 0.5897635 8.8890025 8.8647551 2.3971458 -1.4100448 10.0861491 2.3971458 12.7752121 12.3181403 7.5926095 10.4955577 8.7061385 9.6565566 8.1054942 1.7597098 -1.4100448 7.6531897 8.8222155 8.9853288 9.7061385 2.9821083 8.3769953 6.7190780 10.3459339 6.6010220 9.7572128 NA 9.8204155 2.1747579 3.2336580 10.8411320 6.2053143 3.9473482 8.1785090 7.5613384 5.8089642 6.6450776 14.4817444 NA 10.1980494 -0.4102365 7.3278867 3.5439907 7.1211760 9.3752471 13.531106 6.304040 8.947346 12.192029 10.292400 12.075121 12.762066 12.289150 8.788240 10.587934 12.467366 11.152991 9.366228 8.974578 2.049213 7.045122 10.714239 10.3130289 7.3842104 8.5982234 8.1803816 8.7857820 9.8663436 6.0160595 5.1747579 10.9108771 8.0956059 1.7597098 5.3177165 8.6864701 9.6759308 9.3931184 9.7678368 9.3321039 11.9872018 5.2336504 9.5461708 10.7575264 11.5783018 8.1785090 10.1099222 9.2954269 NA 8.7631094 8.0695749 5.3971492 8.6245937 4.5897934 9.3438470 11.2600082 7.9756571 13.8071844 10.8632988 10.6815606 11.9500930 10.7232579 8.5982234 0.9117299 TCGA-AO-A0JE 53 0 NA 2335 breast stage iiia t2 n2a m0 4-9-2014 female 2005 NA NA infiltrating ductal carcinoma no 8 black or african american not hispanic or latino 61.59.0 6 3 1 3 1 5 2 6 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 2.224912e-07 12.0389579 4.0559678 7.3167974 10.1501386 0.2833292 9.9035946 NA 10.1252012 10.9060368 8.4599635 9.5501613 7.4195119 8.3494639 10.4348143 8.3277691 10.5699326 9.1516830 9.6105532 8.0821166 4.5563926 9.3690686 11.4576764 14.2954756 10.1019570 10.2673186 10.7718845 7.8069369 10.4461857 NA 0.6983963 9.1842416 12.1606590 12.7977602 8.0180844 15.5637590 11.7998956 9.1392815 7.4126579 4.5313004 6.1078029 8.5625985 8.7332113 8.2758410 12.0087411 NA 10.7180030 11.4810011 4.0907264 9.9512433 10.7356161 6.6232245 8.5454696 3.3422703 15.3549139 10.7705450 -1.3015148 7.6022943 2.1578522 6.0907307 9.6518814 9.7911696 8.9212072 10.9383092 10.0998253 10.1761707 7.6584143 9.8270511 9.1872568 5.1902672 9.6239669 4.2219776 9.5672349 15.2463010 7.6593702 10.7228595 11.1130976 9.6467796 0.2833292 2.6984185 8.5439026 8.9090836 12.7766466 1.5057893 5.5185918 7.3918992 9.2663684 11.2158357 8.5041564 7.6053032 5.5313035 10.1568190 11.8954754 2.5057639 13.2692168 6.8683374 6.7428066 11.8422738 13.9160293 12.6566025 7.4160890 10.6824747 10.9233184 9.9592555 10.6431244 4.0203422 8.7235521 11.6276708 9.9175809 NA 10.3966829 8.7577567 1.2833884 2.2244725 10.2288187 10.9698754 9.8795646 9.2443422 15.5238557 9.7214737 9.7872006 7.6379913 3.6526127 14.4914568 10.0095930 13.0443027 12.2173113 9.4912027 10.3503610 8.3548374 9.8966609 0.01226700 0.41614000 0.80182000 0.00989710 0.03569500 0.05996800 1.18790000 -0.00440130 0.03146700 -0.48940000 -0.48940000 1.90580000 -0.00481630 -0.00481630 -0.01144300 0.75738000 0.75738000 0.03400300 0.00794760 -0.38412000 0.36169000 0.00141680 -0.51688000 2.65870000 0.07013000 -0.05533500 0.77276000 0.45585000 0.35875000 -0.52602000 0.01226700 -0.51247000 -0.48602000 -0.05290700 0.05511300 -0.02914500 -0.02914500 -0.00440130 -0.45798000 0.00419320 0.00058456 -0.47232000 -0.47382000 -0.47208000 -0.46736000 -0.02750500 -0.02750500 -0.00481630 -0.01282400 -0.01144300 -0.49463000 0.03400300 0.00794760 0.00794760 -0.40768000 0.34942000 -0.01846100 -0.12384000 -0.50565000 0.07013000 -0.04939500 -0.06463000 -0.51638000 0.78624000 -0.52281000 -0.05681700 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.349 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 0.000 -0.462 -0.482 0.000 -0.440 0.000 -0.179 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.349 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 0.000 -0.462 -0.482 0.000 -0.440 0.000 -0.179 9.3699535 14.3331100 7.0293292 9.5105897 4.1545589 10.7519989 0.2833292 1.2833884 7.8147561 8.5121937 -1.3015148 8.6255237 2.7858853 10.8344422 9.0636413 2.9463379 8.3866627 9.4665967 10.6079305 11.0135619 10.2988503 8.4928282 11.4092188 2.3988429 7.4632840 10.1761707 5.3849132 -1.3015148 10.6511536 4.2529984 12.8116662 12.6366136 8.8095479 9.4748455 11.3038919 8.8570221 4.3422703 3.0203422 NA 1.0203422 8.7180030 10.2553973 8.0021934 3.5057639 8.9747693 8.1700878 9.6075554 7.7536948 9.4993123 NA 10.4599636 4.6984130 4.1578441 9.4143658 7.1035543 7.2644661 9.4887608 8.7738915 8.8225335 6.1578441 13.7058777 -1.3015148 10.5269456 NA 8.0950172 5.3131225 7.4398791 7.8931692 12.6343104 8.5041564 8.6913506 15.5637590 10.1792025 11.5177931 12.0087411 9.2288187 10.1917674 10.6083055 12.7013153 10.4628693 8.9090836 11.7356161 0.6983963 7.5810552 10.3870998 11.106477 6.574930 8.923620 8.769875 9.174146 9.890539 8.139282 5.466598 10.101957 8.667079 7.206207 6.391900 7.804531 12.793067 10.388847 8.960190 7.993033 10.206702 8.031568 8.921207 10.874586 10.857968 9.853863 10.733555 8.875832 8.859544 8.983109 8.019822 8.196264 11.215836 8.773892 10.527342 10.156819 8.123377 13.761934 9.825117 9.811503 13.469799 10.817678 9.005613 3.652613 TCGA-AO-A0JF 68 0 NA 650 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 61.60.0 8 2 2 5 3 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 1 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.668684e-07 10.8665258 9.7230109 7.3138662 11.0445453 2.9423081 10.2669377 0.2053925 10.2601719 11.7156112 7.8175958 9.2175005 7.7928066 8.8789451 9.2109662 7.0297698 9.4115419 10.2058111 10.0249885 8.1261908 3.9057841 9.7464382 10.0324195 13.2965565 10.8632554 9.6090637 10.4345609 6.3752671 10.6760004 0.9423081 0.2053925 9.7445004 11.9902490 12.2559838 8.8286135 12.8103580 12.5725743 9.9075143 5.4907434 3.0126938 7.2963363 8.3819301 7.7393202 7.6592981 12.7771732 -0.3796951 10.5929999 12.8644455 6.5030227 9.2681972 9.9773811 9.1182310 7.6260039 0.6203987 13.9765517 12.9364484 4.6203811 7.6005188 1.2053299 5.5392426 9.8527999 10.9298554 10.2817118 10.5034041 10.2826023 9.8401526 6.7496616 11.4259214 9.6189694 6.0466438 8.5197361 9.3086294 10.5796566 14.8923526 8.0306605 11.4785544 11.4147949 8.6620381 1.4277134 4.1439403 7.9309916 9.4074654 12.3457453 -1.3796951 6.6810753 7.0040834 9.6399697 11.7877972 6.6864683 7.1517604 5.5976593 11.0089345 11.5070283 1.6203987 13.8786874 5.0466438 7.0212587 11.9960973 12.3042509 12.7414268 7.9034674 10.3073172 11.1385404 10.9736444 10.9916112 4.8871646 8.2839370 12.2942402 8.8419662 -0.3796951 10.1892852 8.8953396 1.2053299 2.3263648 10.0292395 10.3389119 9.9613417 8.9057814 14.7302301 9.6803994 10.0895121 8.0382315 3.3752619 16.3116932 9.6441333 12.5743935 12.1036910 9.8994092 9.3138660 8.5628934 10.1388749 0.00083195 0.43081000 0.36914000 -0.00443120 -0.00443120 -0.00678130 0.00499690 -0.00539920 -0.00539920 0.00019805 0.00019805 0.00624810 0.00100120 0.00142410 -0.02958400 -0.02958400 -0.02958400 0.00597000 -0.00423050 -0.00180140 0.00346870 0.00597000 0.00458000 0.00458000 0.00458000 0.00271080 0.00271080 0.00777830 0.01628600 0.00958830 -0.00163540 0.00000000 -0.00443120 -0.00678130 -0.00678130 -0.00138580 -0.00313310 -0.00539920 -0.00539920 -0.00539920 0.00083195 0.00083195 0.01084200 0.00195160 0.00195160 0.00346870 0.00346870 0.00142410 0.01474900 -0.02958400 -0.36918000 -0.00275590 -0.00423050 -0.00423050 -0.00180140 0.00346870 0.00597000 -0.41915000 0.00458000 0.00458000 0.00666530 0.00271080 0.00777830 0.01628600 0.00708260 0.01193700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1921318 13.0982005 3.7903029 10.3095034 3.4277402 10.2337081 1.4277134 0.6203987 8.2642352 8.7184113 NA 8.9078491 3.3752619 10.3393400 8.9321273 1.7903133 10.1566263 9.7921814 10.7088360 9.8912583 9.8472307 7.2460879 12.0017868 4.4277335 8.4131692 9.8401526 4.2928038 -1.3796951 10.5705704 3.3752619 12.5712994 12.0800668 9.3103769 10.7486956 8.1341064 9.0030031 4.9779301 1.9423081 -1.3796951 2.5272706 8.7535213 9.6260036 10.7631243 7.1634112 7.3500676 6.2857148 10.1821443 6.8491974 9.6196744 NA 11.6783708 3.9423081 5.4147952 9.8532556 5.9686645 3.0798048 9.6647731 9.7675840 4.9954167 5.5511161 13.3320998 2.3208312 10.1271825 NA 8.0674623 6.8002878 8.0550074 9.2714308 12.527645 4.112233 8.531771 12.810358 9.985608 10.728577 12.777173 12.314955 8.905099 10.940333 13.443199 9.500728 9.407465 9.874817 NA 7.275015 11.175208 11.2253955 6.4405586 9.0116225 8.4261230 7.9309916 10.4028285 7.0297698 8.3121224 10.8632554 6.9602290 0.6203987 3.3208168 5.3266344 11.6331782 10.2866030 8.0403390 8.4999623 12.8352294 5.6427478 10.2817118 10.4760262 11.1795171 10.5632601 10.5606926 9.6756614 -1.3796951 9.1625404 8.5204910 4.4277335 11.7877972 8.4564296 10.0979653 11.0089345 7.2642352 13.8177877 10.2114338 10.6575828 13.1139218 10.0638406 9.3852507 2.9423081 TCGA-AO-A0JG 49 0 NA 798 breast stage iiia t2 n2a m0 2-10-2014 female 2009 NA NA other specify no 4 white not hispanic or latino 72.63.0 8 2 1 3 2 4 3 3 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8358320 7.8307510 7.0229115 12.4132065 0.6135317 10.3942239 0.2916036 10.7041619 12.4929502 11.2896535 10.3674054 8.8633447 10.4289034 9.2494195 7.1464607 9.3836885 10.2461519 10.0803103 7.6796096 4.6839098 10.2954612 9.8258948 13.9769705 11.9226553 9.2710173 11.3422909 7.6403201 10.4467201 -1.7083964 -0.7083964 8.7199521 13.0488778 13.0565672 7.5839139 12.5887949 14.3891098 9.0347434 5.6579143 2.8765464 6.3414414 8.7262202 8.6688024 7.1833754 13.4693230 -0.1234339 10.5804581 15.5094456 4.9920297 8.8197825 10.4627688 5.5769937 9.4362503 NA 14.7738197 11.4953988 2.1984942 7.3250149 -1.7083964 5.5583779 10.1553912 10.3994629 9.7723822 10.2588183 9.8447412 9.6871261 7.6946037 12.0408330 10.5025677 5.3790560 8.5942309 5.7510245 10.1323699 14.5085462 8.6766994 11.0175972 11.3480604 8.6180217 0.2916036 8.7632672 8.9946304 9.8292957 11.1296141 1.0989585 5.5489791 7.6860550 10.2989697 11.3702432 5.3139605 7.0827547 4.8614492 10.0452266 12.1935902 3.5769937 12.8546095 5.1984824 7.8171129 11.8679583 10.6115463 13.2297013 7.8307510 11.4483071 11.0647312 11.3191819 11.0933004 5.4413407 8.4285829 11.9439889 12.9163875 NA 9.8053195 8.6513416 1.0989585 4.5828992 9.3563349 10.4618301 10.2406891 8.5335750 15.2811307 10.6988598 9.5987928 8.1924590 2.1984942 15.1951326 8.0548045 12.8950445 11.6451524 10.3239821 9.7510236 8.9542603 10.8891720 0.00541390 0.47426000 0.48527000 -0.51187000 0.00805670 0.00283280 0.00346870 0.66974000 -0.51640000 -0.51692000 -0.51692000 0.00000000 -0.00166290 -0.00166290 0.00374650 1.43050000 3.65690000 -0.00097017 -0.00097017 0.00360760 -0.00263220 -0.00083160 -0.00055444 -0.50567000 2.23160000 -0.00166290 -0.00166290 -0.00166290 0.00402430 -0.51373000 0.00541390 -0.00705760 -0.51187000 0.00283280 0.00718710 0.00346870 0.00346870 -0.52808000 -0.51640000 -0.51640000 0.00263570 0.00263570 -0.51692000 0.00263570 0.00263570 0.00263570 0.00263570 -0.00166290 -0.00166290 0.00305220 -0.51486000 -0.00097017 -0.00097017 -0.00097017 -0.51702000 -0.00263220 -0.00083160 0.00194180 -0.52328000 -0.50567000 0.00469070 -0.00166290 -0.00166290 0.00402430 -0.00360110 -0.51897000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 9.8190691 12.4644883 8.2282300 9.8278392 5.6292138 10.9892112 4.4615155 -0.7083964 8.5700416 8.5059112 -0.7083964 7.8877817 3.0464736 9.9399495 9.6590067 1.0989585 9.8933628 10.3198435 7.8877817 10.0803103 10.2606331 8.2774339 11.4715011 3.0464736 9.2852381 9.6871261 3.7834462 NA 11.4610473 4.2223332 12.0828567 11.3250150 8.7209987 9.9163875 8.5839135 9.2311712 6.0597771 1.9920433 NA 2.4615286 8.4665178 8.4789439 11.1611859 7.7009827 6.4222650 7.4937162 10.7049555 5.9209483 9.9989511 NA 11.7838208 3.1984784 6.2688723 9.4115707 5.9140837 5.8765538 9.2738725 8.7094447 10.1788126 -0.7083964 13.6837753 2.7510137 10.9872553 NA 6.8952178 6.8033446 8.2074712 8.1879246 14.552703 5.529996 8.503480 12.588795 10.927083 10.633667 13.469323 13.232548 12.381671 11.172515 13.354987 9.907681 9.829296 9.738158 NA 9.203733 11.950138 11.0383163 8.2370359 9.3346192 9.6101347 6.7673251 10.8685156 7.6579143 9.8461808 11.9226553 6.0126916 0.2916036 4.3790525 6.2661212 10.7430607 10.0334803 7.3305109 8.8765544 11.5583786 6.5252123 9.7723822 10.8593104 10.0973358 10.1185377 10.8751450 8.9264030 NA 9.0747703 7.4981910 7.3710770 11.3702432 6.6752966 10.9274507 10.0452266 7.5653877 13.7925857 9.8092614 9.9794050 12.0668937 10.3090965 9.6197059 3.2457847 TCGA-AO-A0JI 56 0 NA 1528 breast stage iia t1c n1 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 61.60.0 3 1 1 3 3 4 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 5.562279e-08 11.1727995 7.4537842 6.4631025 11.8191429 1.4062645 10.7400649 1.1838993 10.3583878 11.9947176 12.2391606 10.1288342 7.4937338 10.1838782 8.5531120 9.1678218 7.8229175 9.5968008 8.9912330 6.9026959 0.5989368 9.0817236 10.2584657 13.2703462 10.4963831 9.7074402 10.7508836 4.2993546 9.9690582 0.5989368 1.7688407 7.9343060 10.2801541 12.5230787 9.1214973 13.3062209 13.2736045 9.6017307 7.1380741 4.5531147 8.5776263 8.6031363 8.5704591 8.7230370 13.0898292 3.6863773 8.9641445 15.2919670 2.0583511 9.4930362 11.1329753 9.0104266 9.3998156 NA 13.8299418 6.4190939 1.7688407 7.3097219 NA 4.3538032 10.4234767 9.8474364 10.3687535 10.6178113 9.3370079 10.0277993 1.9208268 11.6113656 10.1263927 5.8180836 6.0665219 2.2993619 10.9202801 14.1207921 8.5029630 12.2043952 11.2402901 7.5904373 -0.4010632 6.5355538 7.5790549 9.3612977 10.5531120 -1.4012537 5.9387657 6.7230370 10.7556309 10.7587870 3.4062645 5.9652371 1.4062645 10.0726214 11.5146084 5.8373201 13.2195365 6.7384666 7.9387657 10.3483662 11.6204162 13.0716065 8.7035143 10.6840561 10.7841009 11.0428228 10.7429366 5.2282723 8.3571389 11.3498320 12.1611581 NA 10.0537291 9.5804830 1.5989368 4.0612923 9.4475387 10.5278041 9.5333438 9.6288931 15.0357086 10.2085562 10.7902834 7.5960951 3.6433136 16.7803349 4.6863773 11.9939142 10.6636584 9.9570174 8.5458221 7.7410226 10.2318201 -0.78681000 0.00777760 0.00624810 0.00541390 0.01590800 0.03354900 0.00796650 0.00166420 -0.79494000 3.65690000 -0.08983100 0.70062000 -0.00788630 -0.00807840 -0.01064600 -0.01064600 -0.01064600 0.00000000 0.00000000 -0.79245000 0.00152550 -0.01046200 -0.03313200 -0.03313200 -0.03313200 -0.05118100 -0.05118100 -0.05118100 0.68141000 -0.81030000 -0.78681000 -0.78696000 0.00541390 -0.01945200 0.03354900 0.00796650 0.00796650 0.00166420 -0.79494000 -0.79494000 -0.07883500 0.01084200 -0.06477700 -0.01489800 -0.01489800 -0.01908600 -0.01908600 -0.00807840 -0.00636680 -0.01064600 -0.01064600 0.00000000 0.00000000 0.00000000 -0.78883000 0.00152550 -0.00656690 -0.81802000 -0.03313200 -0.03313200 0.00055459 -0.05118100 -0.05118100 0.68141000 -0.00595220 -0.03939400 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 7.8034867 10.2323650 2.9208459 10.2717829 4.0655465 10.9026965 2.5989130 0.5989368 8.2906594 8.6676938 1.1838993 6.7432686 2.9208459 9.7365474 9.5392292 4.5531147 8.0167682 10.1254149 10.0423773 10.3088611 10.1081414 7.4967611 9.2163831 1.4062645 10.2145453 10.0277993 7.2571276 5.5414312 10.6939830 4.7688407 12.8305869 11.0270141 7.1458099 9.9570174 8.0786958 9.0665211 1.5989368 1.4062645 0.1838358 6.8657023 8.9443208 9.2463741 11.3058433 3.5989130 8.7753505 8.5012906 10.7087464 6.1611581 9.5406969 NA 9.6717183 0.5989368 3.2993619 9.6260131 5.4339543 4.8083696 8.9443208 8.2445741 11.6611305 NA 13.3978431 0.9208268 10.2259935 NA 7.0501273 4.0583511 8.1857556 9.3378524 14.2968335 5.5875990 9.4420517 13.3062209 9.2173012 10.8492141 13.0898292 12.7321382 9.0962985 10.6467212 12.7815428 11.6698752 9.3612977 7.9343060 0.1838358 6.9912327 12.1170770 11.1590097 6.9739556 7.5443594 9.7191537 9.1165852 10.6728965 5.5647013 8.1477376 10.4963831 7.7204495 -0.4010632 3.4568981 7.1294386 9.3412250 10.2218826 10.2377452 8.6212834 12.5821765 5.1687704 10.3687535 10.9278711 11.5449081 9.1244364 10.9679677 9.5840461 NA 8.8585294 6.0167682 6.0083076 10.7587870 3.5531147 10.9660574 10.0726214 6.1535054 12.7794465 9.2227971 10.4098889 11.9170348 9.3174486 9.6508044 0.5989368 TCGA-AO-A0JJ 54 0 NA 1887 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma no 2 white not hispanic or latino 61.60.0 8 2 2 2 3 4 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 5.562279e-08 11.0707128 9.1828976 6.4393622 11.3302003 0.1114320 10.3086520 NA 9.7588938 11.6631436 8.7236896 9.4711848 8.1775247 9.0382255 9.1667177 7.4719166 9.2821949 9.7732134 10.0607758 7.8685473 2.6963945 9.7347072 10.0519936 10.0273147 9.8679916 9.9652647 10.6463866 7.4748400 10.2420059 0.1114320 NA 9.2628747 12.3602524 12.5479734 7.4601634 12.0027127 13.1305047 9.6525320 7.2059525 4.4572134 7.4423522 8.4423522 9.7612903 7.3561958 13.1090853 1.5264695 11.6243404 13.7857747 7.3844540 9.3864424 10.2173438 8.8752010 7.9379840 NA 13.9797238 10.7026459 4.5488435 8.1039015 NA 5.8302528 9.6685799 10.4929783 9.8618631 11.6149298 8.5320976 10.0563913 1.9859011 10.9440616 9.9348026 6.3782220 8.1448586 3.6139323 10.6424918 14.8179673 7.3279550 11.3595605 11.0953790 8.8370858 0.5264695 1.6963945 7.8971599 9.3466518 12.1421025 -0.4735305 4.3593595 7.1739309 10.3879475 12.2930017 4.8118769 7.2746661 4.3844505 10.6560778 11.7636828 -1.4735305 13.5632903 5.4333634 7.6531776 12.6056242 11.4518418 12.7026460 8.1594682 9.7564933 11.0307953 10.9237784 11.1804374 5.1558302 8.0203283 12.3359395 10.7938448 NA 10.1926968 8.7838606 1.1114320 2.5300707 9.5377001 10.3534185 9.7576940 8.6297606 14.9800650 10.2967238 9.9657843 8.4136935 3.1703257 15.7177538 9.9112566 13.3480475 12.7936984 9.5502271 9.6685799 8.3498403 10.4411271 0.00034819 0.49701000 0.49701000 0.00152550 0.00152550 0.00750000 0.00360760 -0.52148000 -0.52148000 0.01042400 0.01042400 0.00644710 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.47797000 -0.00235530 0.01042400 -0.02644100 -0.02644100 0.27833000 -0.03220600 -0.03220600 -0.01395300 -0.00027724 -0.02292700 0.00680440 -0.00443120 0.00152550 0.00750000 0.00750000 0.00360760 0.00360760 -0.54751000 -0.52148000 -0.14046000 0.00221930 0.00221930 0.01042400 0.00000000 0.00000000 0.00000000 0.00000000 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.00650500 -0.47797000 -0.00235530 -0.00733390 -0.53419000 -0.30710000 -0.03122300 -0.34744000 -0.03220600 -0.03220600 -0.02482300 0.01950300 -0.02068700 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 -0.059 9.9579704 12.6716885 4.4572134 10.1254558 4.3573338 10.7004622 2.2269092 1.1114320 8.5992754 8.9326778 NA 8.5550557 4.2269092 9.9495888 9.4029899 1.9859011 10.1980139 9.6165852 10.9776839 10.2637201 10.0053991 6.9776841 10.8447331 4.3844505 10.2208307 10.0563913 5.7838600 NA 10.7389692 2.7743970 13.5692437 12.1682988 8.2094675 10.1730316 8.9123352 9.1198640 3.9527343 1.8483976 -0.4735305 5.1703297 8.5885190 10.1806613 10.6486537 6.5708667 7.0263187 6.7838613 9.9427426 6.2611829 10.0544384 -0.4735305 12.4203431 3.2269092 4.1114320 9.7711578 6.1402245 7.8707685 9.8291118 8.8707688 9.9699344 NA 14.0339578 -0.4735305 10.0337719 NA 7.3370447 6.0102875 7.6685801 8.6336898 12.943450 4.848403 8.398378 12.002713 10.013308 10.537351 13.109085 11.701555 9.320889 10.708246 13.276499 9.818219 9.346652 8.943270 3.050031 7.247572 11.723382 10.6907513 6.6505937 8.7310440 8.7600925 8.9112781 10.0423205 8.0578542 8.2355567 9.8679916 7.1521814 1.6963945 8.8325344 7.4226232 11.0128051 10.1962437 7.7648776 8.2355567 13.0629022 8.2389998 9.8618631 10.7897420 10.5623029 9.9300174 10.7013985 9.1029573 -0.4735305 9.3224638 7.5432809 8.4453361 12.2930017 8.8049222 10.5243580 10.6560778 7.1151873 14.1698217 10.4627426 11.0774601 12.5771718 9.9981481 9.1365749 2.9187869 TCGA-AO-A0JL 59 0 NA 1683 breast stage iiia t2 n2a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 7 white not hispanic or latino 61.60.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.422302e-06 4.509738e-07 11.4340311 3.0973580 5.2207478 10.6028932 NA 10.7041669 NA 8.4498816 10.9437510 10.0598480 9.4982447 8.1133775 8.1848282 9.4982447 9.0365245 8.9157190 9.3985346 10.4574284 8.2701500 4.5754152 11.5485763 10.8373868 13.1542931 10.0565391 9.0828005 10.3952640 3.4599299 10.5678788 8.1323604 0.8749936 5.8598652 10.1181467 12.6948857 5.9338653 14.0756160 12.6291643 8.9120621 7.9482218 3.5379421 8.9410620 10.5544528 8.3151500 7.1417597 7.6298600 NA 11.3408792 10.3473252 8.3985346 10.6175629 11.5658438 8.0482335 5.0973664 1.6119278 13.6790883 8.3358517 3.4599299 7.7938361 NA 5.7162749 8.2586772 10.2073823 9.7667565 9.5915065 8.9904501 9.8570156 8.3012374 11.4180046 9.7308794 4.3774708 6.0973643 3.3774708 5.4397561 14.2755409 8.5975755 10.9800082 10.5473981 11.3774731 2.4599299 8.6343061 8.1037914 7.4649361 10.9024180 0.2899525 5.9624357 6.4192928 11.2354541 10.1534222 5.4599365 5.5188278 1.6119278 9.8455580 12.0925266 6.2088742 12.8631840 4.1968981 6.6119381 10.5690404 12.3332084 11.9109173 9.4611870 10.4295616 10.8834013 10.1886116 10.6376316 3.4599299 7.9834970 11.1768499 11.1268496 NA 9.9093132 10.5603056 -0.7100475 4.4192962 9.3801227 9.1495449 9.2644248 9.5892182 14.8469653 9.5800290 10.6045935 7.6119381 1.2900115 11.4561733 8.2871897 12.3883714 12.1920084 10.2332576 10.6791038 8.0145243 9.5260244 1.5680000 1.7942000 2.4906000 -0.0146410 -0.0022168 0.3243100 0.5084600 0.7652300 -0.2929600 0.2212900 2.6422000 1.9343000 0.9721400 0.5593900 -0.2747600 -0.2747600 -0.2747600 0.6410300 -0.2840600 -0.5992600 -0.3240300 -0.3080300 0.5641800 3.6569000 -0.3102600 0.4283900 3.6104000 -0.2599700 0.5241500 -0.2916500 -0.0042929 -0.4593900 -0.0171160 0.0788710 0.0546600 -0.5943900 -1.2819000 0.7652300 -0.2929600 -0.2929600 0.0289030 0.5633000 0.2287000 0.6240600 0.6240600 -0.3051200 -0.2769100 -0.2941400 -0.2941400 -0.2747600 -0.2833500 -0.2706900 -0.2840600 -0.2840600 -0.5754600 -0.3226300 -0.3140900 0.2579300 0.1569600 -0.8353500 0.2714300 0.4283900 -0.2599700 0.3972200 -0.0283550 0.4651900 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.338 -0.338 0.319 -0.305 0.000 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.338 -0.338 0.319 -0.305 0.000 6.7738263 11.9560123 2.7494485 10.7262012 3.1208661 12.2151938 0.2899525 4.9904512 8.5915063 10.5188290 6.7329543 7.3932978 5.6823289 10.7973094 9.3614725 3.6823261 5.7978042 10.9410619 8.6519540 10.6158778 8.8710600 7.1292140 12.4295616 -0.7100475 9.0532227 9.8570156 3.3774708 NA 11.1615305 3.1969060 13.7421871 12.5050882 7.3774734 9.5903629 7.7818633 9.9686104 3.7494377 5.8291696 0.8749936 NA 9.4724045 11.1530350 5.9482224 4.9624333 10.2869357 9.6866150 10.0297909 6.9973692 10.7611774 6.3774726 12.9445344 1.8749543 4.5754152 9.8500565 6.8484314 3.9338653 7.9157193 7.6994010 6.3012383 6.6908892 14.2275680 1.2900115 10.6764116 1.2900115 9.4549172 6.0973643 8.3560993 7.8252857 9.9903633 9.5532795 8.7718097 14.0756160 9.4244365 11.4400748 7.6298600 9.5742559 8.5308015 10.0565391 12.7879868 10.8165095 7.4649361 8.7036382 0.8749936 6.9765103 11.9426312 10.4063542 5.7978042 8.3587883 8.9211873 6.4994632 10.0610705 5.1229005 4.7162776 10.0565391 5.4192928 0.2899525 7.8712110 8.7025377 10.3513814 10.3761464 8.1938920 10.0255662 6.2557953 3.9904467 9.7667565 10.1665272 11.2507363 11.5379378 9.9606665 6.5567972 1.6119278 8.9511649 8.3234331 5.4798352 10.1534222 9.2354540 10.4346685 9.8455580 7.6609158 14.5689315 9.6552391 10.1165588 10.7733222 11.5608895 9.0989745 5.5188278 TCGA-AO-A0JM 40 0 NA 2184 breast stage iib t2 n1 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 2 NA hispanic or latino 61.60.0 6 3 1 3 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.224912e-07 11.5433941 5.1234344 6.7958591 10.6654985 NA 9.8125584 NA 9.9056131 11.3110953 7.7816456 9.4621703 7.3474353 7.2983596 9.5517942 7.9657843 9.1691937 9.2029187 10.3843535 6.4363168 4.6780212 9.1318626 9.8073058 14.1850161 10.5940928 9.3522527 10.9779128 5.6312295 10.3972296 NA -0.8764662 7.7121487 11.7659370 12.9696099 8.6703284 15.7323673 12.5102395 9.6252710 5.7233456 2.9307941 6.1346604 8.7762790 8.5808148 7.8749783 13.0804453 NA 10.2719105 13.8626872 0.7084080 10.2432116 10.4088361 7.9783020 6.5328250 2.1234344 14.1255624 9.2280327 NA 6.3618385 NA 4.1234344 9.4053640 10.0318266 9.3843536 10.5071382 9.7591520 10.6227816 0.7084080 9.9332020 9.2883408 5.8238742 8.3450211 3.2933558 10.1895231 15.0369545 7.8142005 10.2002496 10.5269786 8.6092633 2.1234344 3.0303184 7.6548157 9.4677298 10.6761031 NA 7.4941212 6.8099340 9.2744504 11.3181908 7.1895231 5.1895241 3.5828691 9.9186619 11.8436782 4.6469978 13.5270452 6.3328869 7.3132586 12.6058638 12.8951297 12.5296389 7.7381436 11.2175116 10.9328001 10.0501451 10.2933590 3.7672946 8.3008536 12.4883893 9.6042241 0.7084080 10.3286163 9.5746450 0.1234013 2.8238716 9.6989732 10.8453876 9.8368204 8.9704913 15.5202561 8.8547531 8.7252047 8.1814256 1.9307752 15.5455644 11.0560178 12.8935816 11.4557503 9.4385835 10.3594481 8.9922566 10.4383457 -0.00117720 0.93142000 0.93142000 0.39081000 0.40177000 0.41563000 0.43496000 0.36190000 -0.02021400 0.44206000 0.44206000 0.81893000 -0.01995000 -0.00283920 -0.00263220 0.72508000 -0.10171000 -0.02840900 0.52783000 -0.45104000 0.83019000 0.30202000 -0.91032000 3.65690000 3.21660000 -0.46206000 -0.45693000 -0.03463100 0.42318000 -0.46982000 -0.00117720 0.00000000 -0.45136000 -0.46109000 0.40644000 0.23473000 0.23473000 0.74651000 -0.02021400 -0.01986300 -0.00995650 -0.46291000 -0.48113000 -0.00263220 -0.00263220 -0.00868030 0.41429000 -0.00283920 0.01462400 -0.01450300 -0.10171000 -0.02490000 -0.01064600 0.00015017 -0.45104000 0.79675000 0.30042000 0.00889200 -0.46408000 -0.46664000 0.00180300 -0.46238000 -0.03463100 0.43361000 0.40003000 -0.01601700 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.434 0.434 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.278 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.434 0.434 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.278 7.9372149 14.2809388 6.0776297 9.7672901 NA 11.4431060 1.4453559 NA 8.1541011 7.1787166 NA 8.3132586 0.1234013 10.7807524 8.4699478 2.1234344 9.1596075 9.5879796 10.7116801 10.7098046 9.1579302 7.1623531 10.9539491 0.7084080 8.1346614 10.6227816 2.5828691 NA 12.1688523 2.1234344 12.7881034 12.2839357 7.3280053 9.4809858 10.1057146 9.1192010 3.8783232 1.7084080 NA 2.2933705 8.3401799 10.2933590 9.8699482 3.5828691 6.4363168 7.4180550 9.8649010 4.4088341 10.2851957 NA 10.9064322 1.7084080 2.5828691 9.2110426 5.8639558 2.1234344 8.6970812 8.1948962 9.6420871 NA 13.5564977 5.6152868 10.6861534 NA 8.6132819 3.5828691 7.5200387 7.8479481 13.1631241 6.3902206 8.9243339 15.7323673 10.1114085 10.9464030 13.0804453 12.2265578 8.9763224 10.3492438 13.4963670 10.0863300 9.4677298 9.9642119 -0.8764662 8.7046344 11.1972408 11.480436 6.418055 8.790528 8.851354 8.218831 10.733601 5.599166 9.140242 10.594093 6.156858 1.123401 6.313259 7.515451 10.545499 10.272546 8.027316 9.373732 10.997262 4.515750 9.384354 10.999183 9.582866 9.465509 10.715424 9.255291 2.708386 9.083552 7.485378 4.904792 11.318191 7.788770 10.494121 9.918662 7.432274 13.533819 10.183454 9.765486 12.249332 10.268729 8.891618 1.123401 TCGA-AO-A124 38 0 NA 3120 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2002 NA NA other specify yes 0 white not hispanic or latino 80.55.0 4 4 4 1 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 3.503719e-06 7.631864e-07 12.2168769 NA 8.6018417 10.6281785 NA 10.4749570 -0.2194379 10.0771330 11.7538182 9.5226278 9.2657576 8.2413964 9.0110198 10.1077774 9.6328685 8.4148053 8.4280574 10.7901945 8.1263741 5.6632421 9.2488837 12.0882743 12.9869013 11.0205953 9.6365057 10.8333935 4.0536153 11.9078401 6.9997678 1.5175781 8.6662954 12.0081148 13.3081983 4.4244586 12.9374196 11.9414160 11.1970448 5.5793401 3.0029905 7.1556389 9.9467621 10.0839994 7.0995182 5.8176872 NA 11.3340684 9.6839789 7.5943806 9.5613028 11.3997492 7.7824767 6.4435636 2.3655526 13.7700835 9.1182211 0.1955996 8.5062493 0.1955996 3.6550656 9.6182271 10.8220301 9.4038710 11.1747045 10.8766554 9.9961321 -0.8044004 11.5874172 11.3514036 4.2830995 8.4925526 1.7806041 8.8830122 15.0722735 8.1107991 11.0477760 11.7504653 11.2108774 1.5175781 NA 9.3428416 10.6586500 11.5951816 -1.8044004 2.7192053 7.5986488 11.6450432 8.0158153 7.1498325 8.6344285 5.5965148 6.9638209 12.4921944 4.9900518 13.1993741 3.6550656 6.6914923 10.6872392 12.0305027 12.5900323 5.7113352 11.0370044 11.7585945 11.4812324 10.3885458 5.1025280 7.9671259 12.8051617 9.1657424 1.6550770 10.3129551 9.6571160 1.6550770 3.3675668 10.2214683 8.0949934 10.5641431 7.7328553 14.5961826 9.9197241 9.1388841 6.9235569 -1.8044004 11.3442721 8.9712469 12.7377616 11.6964785 10.6042318 9.7191985 8.2737872 10.2215894 -0.1480500 0.9828700 3.6569000 -0.1294000 2.1557000 -0.1705000 -0.1101100 1.9594000 3.6569000 -0.1355200 -0.1355200 1.2076000 1.1619000 0.4696400 -0.0030475 -0.1069700 -0.1234300 1.2592000 -0.1502900 0.4944100 -0.1325800 0.6386500 -0.1074900 0.9546800 1.3645000 0.4236800 0.6175200 0.4486700 -0.0789430 -0.7558200 -0.1480500 -0.0906260 -0.1294000 -0.7828600 0.3825400 0.4847500 -0.1565600 1.0466000 1.5132000 -0.1537500 0.9616500 0.5500000 -0.7941100 1.1279000 0.5523000 0.5909800 -0.0847930 -0.7645800 -0.0344950 0.7058800 -0.7027100 1.0380000 -0.1396200 -0.1197500 -0.1484900 -0.1455400 -0.7530500 -0.0013858 -0.1074900 0.5068900 -0.7390600 -0.0904930 -0.1065700 0.4381700 -0.1449000 -0.7602900 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.399 0.507 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.136 -0.136 0.000 0.000 -0.441 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.399 0.507 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.136 -0.136 0.000 0.000 -0.441 6.0158164 12.5731861 -1.8044004 8.7444585 2.7806041 13.3194751 0.1955996 4.1729195 8.7024401 10.3811315 8.3542463 9.8068228 5.9965356 10.5313061 9.5039756 5.3249186 5.3755469 9.7918264 6.2777858 9.5657792 7.8288860 7.9621655 10.6859861 1.1956626 9.0489462 9.9961321 1.5175781 NA 10.0855208 2.8394961 13.0891278 11.7375802 7.2318106 10.4939856 10.7997265 9.4804606 5.9167370 1.0030265 NA 6.0843790 9.3693138 8.5739315 7.4833490 7.3879294 10.0683115 7.4316505 10.0332645 5.9505244 10.6344285 2.7806041 12.8731911 1.8960781 2.5175529 9.8524324 5.5376222 5.5354869 9.3178176 6.5619584 5.1956350 6.5750143 13.6650877 2.7192053 10.1603385 NA 8.8094260 3.7502206 8.4694322 8.4014299 8.385461 8.907304 7.883887 12.937420 10.572847 12.419337 5.817687 10.511918 9.187159 11.810691 12.941783 11.376789 10.658650 8.257683 2.655077 9.035628 10.331346 11.126374 6.957188 8.577180 9.189283 10.426029 10.152684 4.655066 3.780604 11.020595 8.428057 7.269778 9.121933 9.589622 13.686895 9.470597 3.305839 8.686488 10.508520 5.149832 9.403871 9.797407 11.551263 11.578261 10.757163 8.528792 5.544365 8.307842 7.317170 5.471760 8.015815 7.187158 10.047561 6.963821 8.259032 14.258378 9.446527 10.483349 13.822743 11.352194 9.133746 -1.804400 TCGA-AO-A125 72 0 NA 3019 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2002 NA NA other specify yes 0 black or african american not hispanic or latino 80.55.0 5 5 2 2 NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.224912e-07 9.9357744 0.1830736 7.8148984 10.9559794 NA 10.5624933 NA 8.9155651 11.2767527 10.0940075 10.2045577 8.9313078 9.0000986 8.2776324 8.7643156 9.7170936 10.6766369 8.3696418 5.0575846 NA 12.6123474 9.8311729 12.4578814 10.4842301 9.1971353 9.8864418 -0.4018254 10.2929456 2.4055023 2.9200836 4.6642439 11.2068694 12.6533146 0.9200646 12.6776373 13.6778039 7.9947573 7.8002761 4.1217117 5.1980658 8.4607897 9.8789233 3.7274304 13.3745855 -0.4018254 12.4235088 14.2953644 6.9775307 10.7794352 10.7251795 5.7580233 5.8742781 NA 13.4279674 7.0452354 NA 7.3696418 NA 1.9200646 9.4800312 9.6615476 10.9327051 11.7726101 9.9357744 9.6232920 1.7680784 11.3723218 10.3016235 7.0327808 8.4231113 11.5147784 12.3634386 13.7793436 10.1098557 11.2213481 10.8514091 9.5754324 0.5981746 3.1831212 8.3362446 7.7605437 11.0254653 NA 1.9200646 7.0075431 9.8858649 11.1469744 3.2985850 2.1831053 2.9200836 9.9807765 12.4683245 3.9200836 12.9105094 8.2527884 7.4654309 13.8440765 10.2316018 13.2141269 8.3663366 9.7737020 10.5797197 10.5925201 11.0862437 3.7274304 8.9019333 11.6961846 11.0887527 0.5981746 9.9818568 8.0032941 2.8460720 5.0941685 9.8323712 10.8534762 10.0834787 8.9223332 15.9813674 10.2142418 8.8707824 11.1966703 NA 16.4186182 10.4646587 14.1102757 10.8620085 10.3650954 9.9324258 7.9710175 10.4534454 1.22500000 1.78690000 1.78690000 -0.01194900 -0.01194900 -0.00981300 -0.01233600 -0.00733390 -0.02035000 -0.00346270 -0.00346270 -0.01466300 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00899060 0.00638710 0.01307400 0.00319100 0.00319100 0.00319100 0.00983100 0.00983100 -0.00340930 0.01978300 0.02244400 -0.01037000 -0.01271300 -0.01194900 0.00013863 -0.02268500 -0.01233600 -0.01233600 -0.00733390 -0.02035000 -0.02035000 0.94262000 0.94262000 -0.00346270 0.00108240 0.00108240 0.00388540 0.00388540 0.00485790 0.00485790 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00470790 -0.00899060 0.00180300 0.01307400 -1.04080000 0.00319100 0.00319100 0.01684500 -0.00111230 -0.00884420 0.01978300 0.00930980 0.03059100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 5.8173214 9.9490916 6.7780614 8.9655673 0.3029916 10.8611282 1.4055023 NA 8.8088239 7.3827874 NA 5.3123965 1.4055023 9.9952923 9.7805468 3.9200836 9.8431109 9.2820243 10.1584854 11.4133356 9.2519380 8.4530208 10.9327051 0.4581720 9.0545069 9.6232920 4.0900065 NA 10.4298556 4.2420079 13.4978398 11.7141715 6.6749676 9.6191324 8.2793910 9.4715966 4.1831133 2.7680784 0.9200646 4.2420079 8.6149608 9.7183904 10.0027619 -1.4020160 9.7807145 7.4807959 10.1646822 5.4310412 9.2365883 0.5981746 11.2883688 -0.4018254 5.5288901 11.1334983 7.0216885 -1.4020160 7.3020558 4.7066742 3.6856150 2.6856262 14.3017857 -0.4018254 9.5251898 -0.4018254 9.9829363 5.1527432 8.2563639 8.5406670 13.444725 4.326070 9.129534 12.677637 10.697500 11.400669 13.374586 12.388806 9.057584 10.101481 13.720333 8.041096 7.760544 9.549437 1.183137 7.790446 10.970746 10.4634991 7.1019778 9.2688000 8.8508179 7.8578958 10.0360241 3.7680784 5.2420079 10.4842301 6.3925682 -0.4018254 8.3158289 6.5494951 8.7364243 10.6298537 8.6301983 8.2898962 10.6726285 NA 10.9327051 10.7325788 11.4465798 8.7351437 10.4506820 7.6615472 -1.4020160 9.1744668 4.0244172 -0.4018254 11.1469744 1.7680784 10.8608052 9.9807765 7.4215196 13.8573073 10.0275592 10.0839819 12.4437405 10.3136855 10.6988148 2.5050525 TCGA-AO-A126 39 0 NA 3307 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma yes 0 asian not hispanic or latino 80.55.0 3 2 2 2 2 4 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.39057e-07 10.9153717 4.6588684 6.3099201 11.8463749 2.2438214 9.6439985 NA 8.8237751 10.6397218 11.9885244 9.7456679 7.4949188 9.0339075 9.5043582 7.2587808 8.5338495 10.1602078 9.6742832 7.0851325 3.3027285 11.3891260 11.1426840 13.1082748 11.2040740 8.5672610 10.0893207 6.6812356 9.3233153 NA 0.9808296 7.2019004 10.1269830 12.7365184 8.4435031 12.6707942 13.6033972 9.6311299 7.0767205 1.2438518 7.5567137 8.6375787 11.1975421 8.0872284 12.4256041 NA 10.9532017 14.9151322 5.6361490 10.2083545 10.3175260 6.0934968 6.4980721 -0.3411716 14.0493062 11.9713584 3.4137565 8.7209142 NA 3.1824381 8.1607054 10.0131176 8.9751498 10.9677760 8.8948823 10.2818351 2.4662356 10.1295271 9.4278795 7.5955059 6.1507221 8.0053820 10.6293336 14.8017131 6.1046281 10.3850863 10.6325655 8.7555833 1.6588741 5.0511850 8.6616833 7.1902494 10.0629453 0.2437909 6.1018118 7.2096152 9.8181089 10.7657582 6.2661981 5.5043598 3.6130601 9.0934965 12.1022003 2.1182933 12.9969778 6.7673926 6.7984200 11.5966098 13.0647409 12.2513252 8.5369190 10.3872139 10.8089327 10.1799779 10.4394080 1.9807931 8.9626488 12.1946295 12.7070144 1.4662356 10.5650071 8.7276465 0.6588284 3.7463343 9.7195641 10.4307702 9.4336553 8.7842815 15.7175893 10.0940175 9.3540964 8.7182126 5.2587827 15.4250476 6.7829890 12.9324453 13.7322148 10.2936792 10.6425743 7.5747479 9.5725953 0.00000000 0.00000000 0.00346870 0.00708260 0.00138680 -0.00097017 0.00541390 0.00138680 -0.00013862 -0.66467000 1.64290000 -0.01436600 0.00750000 0.00750000 0.60973000 1.71900000 1.69810000 0.00166420 -0.00443890 -0.00650500 0.00944910 -0.00124730 0.00499690 0.02567100 0.01474900 -0.00166290 -0.00166290 0.02370600 0.02006300 0.02763800 0.00000000 -0.02268100 -0.66716000 -0.00097017 -0.00097017 0.00541390 0.00541390 -0.00083160 -0.67884000 -0.01106000 0.00000000 0.00666530 -0.68479000 0.00666530 0.00666530 0.00666530 0.00666530 0.00750000 0.00750000 0.60973000 -0.66328000 0.00166420 0.01656500 0.01782400 -0.67481000 0.00944910 -0.00691950 -0.65482000 -0.65659000 0.02567100 0.00360760 -0.00166290 0.02370600 0.02006300 0.00610900 0.01880300 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 9.0230027 12.8665689 6.9396392 9.9774110 2.5657678 11.4542991 1.2438518 NA 8.9008514 9.2891352 -0.3411716 7.1626934 1.4662356 10.0147698 9.1696324 3.7463343 8.7868626 8.6616833 10.0420324 12.0731570 8.4002510 6.6246522 11.8944337 2.9067944 6.4402280 10.2818351 3.1824381 NA 11.0690545 3.1824381 13.3364227 12.4104122 8.6950417 8.9592207 7.9897850 9.9425353 3.9067944 1.6588741 NA 4.4137565 9.1882988 11.0626791 10.2763357 3.7463343 8.4868141 8.4516583 9.8616042 4.7032613 9.6268149 NA 11.4998427 3.1182933 4.7032613 9.9889952 6.1092540 2.1182933 9.0554731 8.1305433 10.2258736 -1.3411716 14.8826059 1.2438518 10.3130566 NA 7.3935775 6.3799675 7.8060733 9.2744979 14.677342 6.174568 8.498072 12.670794 10.474652 10.396960 12.425604 11.445342 10.100256 9.801613 12.540747 9.405383 7.190249 9.669396 1.466236 7.433656 10.368383 11.100775 6.692290 9.103883 8.943114 7.331293 9.781987 5.756901 5.577731 11.204074 8.811153 3.980793 9.935574 6.961095 10.808933 10.447994 8.512178 9.582196 7.142684 4.213456 8.975150 11.007043 11.088536 9.178505 10.318864 6.601383 4.658868 8.386295 7.716752 4.051189 10.765758 8.779106 11.053599 9.093497 7.012015 15.276034 10.164680 9.781049 11.990065 10.520731 9.573253 2.565768 TCGA-AO-A128 61 0 NA 3248 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 80.55.0 4 4 2 5 3 3 2 5 3 3 NA NA 0 0 0 0 0 0 0 0 7 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 7 0 0 0 0 1 7 0 0 0 0 0 4 0 0 7 0 0 4 0 0 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 7 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 7 0 4 4 0 6 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 4 5 0 7 7 0 0 0 0 0 0 0 0 0 1.696495e-05 5.78477e-06 11.9823280 1.9256957 5.5106518 11.5225456 NA 10.1534782 -1.8815074 9.6981228 11.9582281 8.7070499 9.4106570 8.5818596 9.3845362 9.6467895 5.8865209 9.4950033 9.2051352 10.0891603 8.4592980 5.9825213 10.3970752 9.1964861 12.8144879 10.3641851 9.8694609 10.6114403 9.1850974 11.0157990 6.0009780 3.1627257 9.9424985 9.5741763 11.8884830 5.7907616 12.3712964 10.1229070 11.4021472 5.5612803 3.3277879 2.8187688 8.8564277 10.9537937 4.4402612 9.4626313 NA 10.4498122 7.7889917 9.3290067 9.7636786 10.6853407 7.3180077 6.3471536 -0.2967221 15.1322338 11.9065439 2.2882700 8.1803816 NA 4.6418986 10.6455680 9.8782235 9.3192341 10.3798427 9.6843894 10.1403564 4.0725346 12.4156099 10.5149402 6.7621920 8.6995360 1.4402612 7.0252260 14.7978842 8.4730364 11.2664942 10.7355733 11.8862095 0.7032779 10.4813750 7.4912005 9.3763125 11.5319633 NA 2.2882700 8.6767561 9.3944597 10.0398045 4.9127504 9.3973655 6.1126897 11.4123817 11.7478058 2.0252415 13.7884383 4.6101862 7.5041977 12.7203963 9.9794223 13.4060478 6.1897969 9.3368986 10.6834374 10.2677935 11.4832907 5.5277272 8.0999027 12.0505501 4.8048383 NA 10.8375102 9.7454132 2.2882700 3.0757893 9.7778854 9.7358029 10.6731640 9.3465527 15.5482079 10.2350042 10.6176830 7.6477656 1.7032779 12.1777643 6.4626315 13.0625899 11.8937399 10.3137076 9.3892147 8.9361185 10.8224400 0.2449800 0.7254600 0.7290500 0.2299300 0.4720400 -0.0142280 0.1923800 -0.0217840 -0.0157480 0.7262200 0.7262200 0.7037100 0.2379800 0.1611800 -0.0156040 -0.0156040 -0.0156040 -0.0124330 -0.0124330 -0.0040162 -0.0077482 -0.0849260 -0.0154660 -0.0154660 -0.0154660 0.0827650 0.0827650 0.4610900 0.2404400 0.2512100 0.2449800 0.0042556 0.2299300 -0.0142280 -0.0142280 0.1923800 -0.0164290 -0.0199220 -0.0157480 -0.0156040 0.4947600 0.2270000 -0.0212350 0.2358100 0.2356600 0.2356600 0.2471600 0.1611800 0.2494900 -0.0156040 -0.0156040 -0.0124330 -0.0136770 -0.0136770 -0.0040162 -0.0077482 -0.0849260 -0.0124380 -0.0154660 -0.0154660 -0.0066432 0.2263800 0.4610900 0.2457500 0.2032000 -0.0136770 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.240 0.240 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.240 0.240 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 10.2304491 12.5202149 0.4403144 8.3106282 5.8256941 10.3830711 4.3081570 0.4403144 9.4464494 7.9979184 NA 6.7888853 NA 10.6526382 9.6026549 1.4402612 9.6251388 9.6066776 8.4901120 8.1978202 9.1693608 7.9111259 10.1620462 4.9127504 8.7302823 10.1403564 4.2476162 -1.8815074 11.0038411 2.2882700 12.4305093 13.1283826 7.0870024 9.7603871 11.5553071 9.7312040 6.9353195 3.4037313 0.4403144 1.1183597 8.8239678 9.4186879 6.6995364 2.7033001 9.2956117 8.0446313 9.7454132 3.2882552 9.9990669 -0.8817732 9.1998188 5.7693883 4.2476162 9.9932437 7.6765072 6.9763167 11.2304490 11.1417432 8.5519209 3.1183431 13.0977606 2.4402612 11.0059368 NA 8.5309053 2.0252415 8.0696200 7.9385146 11.836531 7.886520 8.176327 12.371296 10.265222 11.037012 9.462631 5.703297 8.973204 11.033468 13.554429 10.044631 9.376313 8.415252 2.762200 7.401424 12.125538 10.759710 1.577779 9.058649 7.688191 9.367449 10.445941 9.457072 5.866527 10.364185 7.583902 8.422116 3.544597 8.637932 12.802098 10.897850 8.535861 8.363888 10.792748 8.912751 9.319234 10.727514 9.686767 10.551921 11.091495 9.091315 4.288263 10.126750 9.092478 8.381604 10.039804 4.327788 11.730422 11.412382 8.378078 13.304833 10.672445 10.498796 13.152619 10.932517 9.553485 4.247616 TCGA-AO-A129 29 0 NA 2923 breast stage iib t2 n1a m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 80.55.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.150798e-06 6.244252e-07 11.9945992 4.3274862 6.6877438 10.8988027 NA 9.8267202 NA 8.4958706 10.9624383 8.1797170 9.4535964 8.4599381 8.2636725 10.9060780 7.6604709 9.2932718 7.9124499 10.5485170 8.9624383 4.3274862 10.6779168 12.0785166 12.4393255 10.3152982 10.0359083 10.1758699 7.9262557 10.3693573 6.5636859 1.6270465 7.7329563 11.7063660 13.2951019 8.2435967 11.5397502 11.4001871 10.8672430 5.9933709 0.9489746 8.2138877 8.5768747 6.8938342 8.2362266 5.5812428 0.6270465 12.2024690 11.4640844 8.0782592 10.7005870 10.7878648 8.3378542 6.8891425 0.6270465 14.7404725 11.8144000 1.4344014 8.7065326 -1.3729535 5.9668988 9.0321893 10.0736143 9.2518433 9.3727223 8.9136057 10.8038444 2.4344014 10.6221084 10.7662794 5.4084062 6.9216684 3.2709026 8.2269607 15.4158682 7.3367868 10.6043279 9.6666524 11.1657219 1.6270465 NA 9.5050988 9.1729777 10.2073065 NA 3.5339371 7.6071875 11.1880971 9.8193407 6.0020881 7.2082480 6.2044772 8.8316192 11.9395055 2.7145093 12.8103731 4.5812428 6.6382752 10.7527842 12.4493200 12.6429856 7.3100429 11.1308736 10.7303357 10.1269336 10.4950987 2.7145093 8.3361316 11.9910457 7.4756710 3.6714406 10.6768964 9.1338514 3.6270465 3.9856553 9.6542628 12.2029416 10.2564045 8.2399164 15.1728420 11.0616761 9.4559777 6.6549539 0.9489746 12.8376431 7.4756710 12.4322879 11.7691550 9.4520066 10.2171671 7.3651405 10.5673982 0.0817550 1.0979000 1.4562000 -0.0314960 0.5150700 -0.4165900 -0.2488500 0.3505500 0.1975600 -0.4781800 -0.4781800 1.2217000 2.4003000 -0.4689700 0.3544700 0.0139110 0.0139110 0.9308100 -0.1212100 0.2240700 -0.4506100 0.2978700 -0.2215800 -0.2768200 -0.2884500 0.0502500 0.1229900 -0.2544300 0.7583400 -0.3848100 0.0817550 0.0070826 -0.4438300 -0.2747600 -0.4687200 -0.4430700 -0.4430700 0.3505500 0.2113100 -0.0486480 0.0144700 0.3805400 -0.4781800 0.6597700 0.0670880 0.0670880 -0.4666300 -0.4553300 0.2099300 0.0891270 -0.1468200 0.3779200 -0.4689700 -0.4689700 -0.4369400 -0.4621500 -0.4863000 -0.1456700 -0.2215800 -0.2884500 -0.0153290 -0.4796500 -0.2403400 0.0301690 0.0511030 0.0680910 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.139 -0.139 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.139 -0.139 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 9.421464 13.311577 3.533937 9.873195 5.922495 13.182056 5.341292 5.693138 9.056455 9.838936 6.368515 8.886544 4.327486 10.899678 9.769155 2.327486 8.799475 9.697169 8.027928 9.821805 9.268991 7.126893 11.526594 1.434401 9.003173 10.803844 2.874974 NA 10.146193 3.434401 13.816486 12.837415 7.914760 9.470969 10.072063 10.384855 4.693136 2.714509 NA 8.842581 8.785657 10.361758 6.575415 3.327486 9.362731 7.459938 9.964670 5.447225 9.375241 6.776795 12.685040 2.434401 6.044901 9.961623 7.015711 8.094654 8.697169 8.110864 9.571028 2.212009 13.809597 -1.372954 10.978263 -1.372954 8.935387 4.212009 7.674172 6.851049 11.820254 8.261859 8.084429 11.539750 10.561844 12.079418 5.581243 10.485806 8.972453 11.124650 13.092359 11.190244 9.172978 9.295933 3.714509 7.693137 11.313111 10.569929 4.533937 8.975776 8.440829 6.521866 9.315386 9.474888 6.166207 10.315298 10.303887 NA 9.261859 9.303525 11.500300 10.481916 7.727710 9.841367 7.799475 8.116896 9.251843 10.102275 10.673831 10.052264 10.393163 8.270904 NA 9.837427 6.761474 9.294159 9.819341 6.545911 10.819957 8.831619 8.082375 14.771567 10.393577 10.332248 12.353798 11.266615 8.820573 2.796971 TCGA-AO-A12A 47 0 NA 2755 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 5 2 3 NA 2 1 3 3 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 1.112456e-07 10.9207901 8.0485201 7.3911216 11.1811985 0.4485838 11.3663521 NA 10.0591706 11.6792280 9.7095266 9.8312311 7.7455231 8.6882055 9.1032430 9.1429650 9.1671399 10.0870430 9.4785844 7.8579978 2.2559539 10.9085508 10.3596244 13.3520653 10.8468163 9.8548120 10.5958120 6.2559614 10.5894368 3.0335640 3.2034988 8.2987939 13.1563975 13.0209520 8.8214720 12.5755534 12.3991629 9.8143827 7.2719747 4.9564006 6.8409239 8.7951208 10.8293386 8.4301744 12.7414319 6.5200702 10.9643069 14.2295312 6.4429601 9.8831519 10.5577848 8.1139432 4.9404581 -0.5513104 14.3685301 9.7089385 2.6965280 7.7973353 0.7705331 4.4028040 9.9755952 10.3400111 10.3711914 11.4797913 9.9979104 9.9993539 2.6965280 11.2219523 10.2055803 6.6084781 8.2799142 6.2299666 12.1316016 14.7592198 8.2229330 11.4554591 11.2679878 7.9897039 0.7705331 1.9080443 9.2647907 9.0660744 12.1548872 -1.5513104 5.9643062 7.6604951 9.5675481 11.4403060 11.3044488 6.4258873 4.5146967 11.0151368 12.0143042 1.9080443 13.3473973 6.9955015 7.6384316 12.8023052 12.5402903 12.7070258 7.4230218 10.3760147 11.3344940 10.8184770 11.0328650 4.5360716 8.6592785 11.5694929 10.8627637 -0.5513104 10.6325525 8.8290681 2.0335816 4.2575085 9.5247546 11.4654153 10.4974344 8.8441411 15.0876226 10.1236820 9.8690936 8.9897036 4.4709728 14.7804162 9.6941597 13.4552837 11.9973085 9.9711886 9.6689853 8.4273175 10.7459389 -0.21243000 0.99717000 0.99717000 0.00000000 0.00000000 -0.18534000 0.29676000 0.06265100 0.06265100 0.00013863 0.00013863 -0.00747200 0.25652000 0.25652000 0.30076000 0.30521000 0.30521000 -0.00166290 -0.00166290 0.27395000 -0.00567570 0.07067300 -0.02288100 -0.02288100 -0.02288100 0.21908000 0.22742000 0.23055000 0.28612000 -0.21243000 -0.21243000 -0.17988000 0.00000000 -0.20736000 -0.23994000 0.29676000 0.29676000 0.06265100 0.06265100 0.06265100 -0.00221680 -0.00221680 0.00013863 -0.02151000 -0.02151000 -0.02151000 -0.02151000 0.25652000 0.25652000 0.30076000 0.31803000 -0.00166290 -0.00932870 -0.00932870 0.27395000 -0.00567570 0.07067300 -0.36839000 -0.02288100 -0.02288100 0.31033000 0.21908000 0.22742000 0.27148000 -0.03558500 -0.35920000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.227 0.227 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.227 0.227 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1671399 12.7290878 7.7523880 10.1507797 3.7705331 11.0250914 1.4485838 0.7705331 8.2543507 9.3042541 0.4485838 8.1263617 3.0924612 10.0118032 9.7929030 2.3554956 8.6714020 9.4778942 10.3255076 9.4577359 9.5264975 7.7316951 11.4512463 3.5360653 9.7772819 9.9993539 6.6285155 NA 10.4205098 4.3554956 13.3047407 11.8470835 8.1900740 10.4709748 8.8925865 9.0861376 4.3793437 2.2559539 0.7705331 4.9080395 8.2381405 9.3991630 10.2527380 5.5146967 7.9188388 6.6726092 10.2184449 7.1455745 9.3494739 -0.5513104 11.1007798 2.9721780 5.0924612 9.7836624 5.9248268 4.3793437 8.8537484 7.9364471 6.4820302 NA 14.0626554 1.4485838 10.2937050 -1.5513104 9.1359827 5.6185323 8.2987939 9.0194114 13.5493523 5.0184606 8.5778899 12.5755534 10.7617735 11.2186514 12.7414319 11.8940099 9.0843253 10.6269606 13.4688491 10.9281347 9.0660744 8.4187128 0.4485838 7.4057091 11.2227764 11.233855 6.823646 9.375644 9.550583 8.286235 10.817564 6.810551 8.890514 10.846816 5.724732 2.255954 7.328190 6.787700 11.921932 10.577568 8.729378 8.778403 11.982058 5.924340 10.371191 10.582391 11.265391 10.776160 10.629449 9.266390 1.033582 9.379189 6.809629 6.262388 11.440306 7.041064 11.094000 11.015137 6.924341 14.114332 10.055475 10.546639 12.931289 10.782321 9.692971 2.618521 TCGA-AO-A12B 63 0 NA 2359 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 80.55.0 5 5 3 2 2 4 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.781139e-08 11.2690765 3.0062442 7.2012555 11.0445813 -1.2416115 9.7917353 NA 9.3042420 11.1700881 11.3071343 9.4360319 7.6286774 8.3766980 7.9332380 9.3739420 8.8230551 10.7413059 9.4938683 5.0250997 1.3432941 10.3253177 9.7183142 13.0878985 11.0468900 9.5951517 10.8474318 3.7125077 10.0970487 -1.2416115 0.7583032 6.1761652 11.1866725 13.3160752 5.5656672 11.7260790 11.3388065 7.6860901 7.4622160 4.8027051 7.6348292 7.2380923 10.3409248 3.2177425 13.7223824 3.3432799 11.0785488 13.8693257 -0.2416115 10.4598051 11.5624434 7.8563446 5.4862317 0.3432372 14.6759888 10.1029911 -1.2416115 7.7917353 NA 4.5396737 9.1048260 9.2749973 9.7889794 8.7370228 10.1414766 10.1075936 -0.2416115 10.7586645 9.5632501 7.2259179 7.1719404 5.4021696 11.6875707 14.3456797 8.3437445 11.7535495 10.6378956 10.7937988 -0.2416115 NA 7.3319595 7.8510694 9.2033272 NA 4.6890475 6.2259169 9.9375994 10.5908068 9.4021685 3.1506247 2.0802483 9.9823140 11.4046460 0.3432372 12.8280977 7.1761652 7.0620926 11.5281502 11.0047561 12.2285899 4.7583138 10.4057707 10.5943627 9.9786907 10.6006627 2.9282377 8.4254241 11.2688293 11.0920268 -0.2416115 9.5198636 8.5065052 0.7583032 2.3432657 9.8733560 10.2896937 10.1452525 8.0959344 15.3280493 10.3633288 9.3498348 6.3730217 -1.2416115 16.8754532 9.0204072 10.1772191 10.4280832 9.4448128 8.9943266 7.0390835 10.5582940 -0.0213800 0.9513100 0.9532300 -0.0223400 -0.0239840 -0.0313670 0.9491400 0.4875500 0.4758000 0.4699000 0.4699000 0.4699000 -0.0191850 -0.0191850 0.4728800 0.4728800 0.4728800 -0.0318840 -0.0269950 0.4706600 -0.0250800 -0.0158710 0.4500200 0.4500200 0.4500200 0.4498500 0.4498500 0.4498500 0.4843900 -0.0213800 -0.0213800 -0.0084463 -0.0223400 -0.0313670 -0.0313670 0.9068500 0.9322200 0.4875500 0.4758000 0.4758000 0.4677500 0.4677500 0.4856000 0.0000000 0.0000000 -0.0045774 -0.0045774 -0.0191850 -0.0191850 0.4728800 0.4728800 -0.0269950 -0.0306840 -0.0306840 0.4706600 -0.0250800 -0.0106540 -0.6083600 0.4500200 0.4500200 -0.0113430 0.4498500 0.4498500 0.4843900 0.4795800 0.4876700 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 6.4448128 10.8247379 4.3432728 10.2646199 2.8457710 10.3124215 -0.2416115 NA 9.0086107 5.6652023 NA 5.4021696 NA 10.2596519 9.0145210 0.3432372 4.8027051 8.6470554 11.3338516 10.6405733 10.0954101 6.5132002 11.1360651 1.3432941 9.5157024 10.1075936 7.4165239 NA 10.7480616 1.9282377 14.1451179 12.6390438 6.8190077 11.0595227 9.6905271 9.3739420 -1.2416115 3.2818763 NA 4.7125077 10.4587520 11.7882897 11.2197918 2.9282377 7.8355818 6.6949498 10.5567841 4.7583138 10.0162893 NA 13.2215174 0.7583032 9.2340457 9.7450361 6.6617724 2.5656703 8.0483310 7.1929408 4.9282377 NA 14.0682860 -1.2416115 10.2867665 NA 9.8061180 5.3730217 6.9919322 9.5680804 13.671445 3.343280 8.384021 11.726079 10.084180 10.944117 13.722382 11.531658 9.431621 10.010978 12.588431 10.170353 7.851069 9.012160 1.080248 8.285789 11.007129 10.225918 7.671201 7.840461 8.744154 8.986578 9.633893 5.665202 8.524841 11.046890 5.689050 -1.241612 7.835128 5.793168 9.219792 10.239607 9.062983 10.170882 9.788979 2.845771 9.788979 10.058665 11.993579 8.784836 10.064374 8.742731 NA 9.246584 7.761128 4.115866 10.590807 7.982314 11.763410 9.982314 6.635197 13.655543 10.796888 11.377845 12.963724 9.866183 9.296501 2.217758 TCGA-AO-A12C 42 0 NA 1994 breast stage iib t2 n1a m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 80.55.0 2 2 NA 2 2 2 1 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6596828 7.7041679 5.8850838 11.2859634 1.3407901 10.0078750 1.0777215 10.1028686 11.4830833 8.4440512 9.9530177 8.1045290 9.2978655 9.2396167 5.5502173 9.3640558 10.5375705 9.7323650 7.7698213 -0.2441724 10.9983797 9.5997221 13.1125968 12.0430805 9.1945929 10.3645178 4.3103910 10.3256566 NA 1.0777215 8.2910763 12.6833012 13.2742697 7.3778525 14.3771661 13.6391125 9.4014594 7.6106691 5.7670271 7.2596265 8.4440512 9.8991842 8.8056494 13.1420003 0.7558276 9.8472364 13.9700442 4.4562410 8.8406093 10.9689052 7.1308403 10.3089502 -0.2441724 13.2194339 10.4631601 4.1481206 8.0481228 0.3407332 5.0956502 10.3194739 10.0532904 9.3218551 12.0486977 9.9695127 9.5231579 2.4562279 11.7835342 10.8046284 8.2131820 7.9257259 1.0777215 11.6359584 14.9629869 8.4137269 11.2088143 11.3239946 7.8245795 1.5631581 5.5502173 8.3924256 9.6161121 11.4957925 -1.2443433 6.8218900 7.5106882 9.2665652 11.4832960 6.1904292 5.4422999 4.5631581 10.5127742 12.4031470 2.4562279 13.6118374 5.6626926 7.3218551 12.6125183 12.9465516 13.1929678 7.9846195 10.3987552 10.5094356 10.3819207 11.1045291 4.6626897 8.9640353 12.5180792 11.6951965 -0.2441724 10.2101002 9.0214162 -0.2441724 3.5154854 9.4157969 10.7005131 10.7764338 8.3482581 15.1818691 10.4734774 10.0486977 7.8850838 2.0777215 14.8200385 8.3332296 12.6917027 11.8525161 9.9785959 9.4014594 8.7259068 10.2611163 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6924391 14.0685067 9.4484164 10.1497277 3.2623279 11.0293052 1.9257336 -1.2443433 8.5006348 8.1862534 0.3407332 9.7186969 2.5631581 10.0055071 9.3787680 0.7558276 8.5206725 10.0452435 8.1966700 10.0584399 9.8007893 9.4050572 11.1789169 2.9257336 8.7947200 9.5231579 4.0037282 NA 11.5749822 3.0777215 12.9676893 11.7387946 8.6338518 10.1253984 8.3256567 9.3501255 3.7099964 0.3407332 1.0777215 -0.2441724 8.3445156 9.1395053 10.3270796 5.0225853 6.2403410 6.1045296 11.8800839 6.4972675 9.8805684 NA 10.4295517 3.7099964 4.6626897 9.8384224 6.7713270 4.8001958 9.1545447 8.0572970 7.8137927 -1.2443433 14.4242982 NA 10.2847434 NA 8.6122264 5.9055483 8.2616126 8.6581761 13.952019 4.483719 8.702707 14.377166 10.871170 10.345452 13.142000 13.206497 9.043652 11.034776 13.371603 11.345920 9.616112 8.796091 NA 8.355714 11.854491 11.342172 7.533878 9.486271 9.482019 6.421137 10.659886 6.392426 8.612226 12.043080 6.476900 5.650618 7.287182 5.298988 12.132062 10.218303 8.493893 9.308470 12.479675 5.955473 9.321855 10.841605 11.416911 10.263100 10.722306 9.108948 NA 8.720199 8.616392 6.190429 11.483296 8.764230 10.978970 10.512774 7.404446 14.611083 9.743065 9.706357 12.138830 10.913148 9.964035 1.563158 TCGA-AO-A12D 43 0 NA 1948 breast stage iia t1c n1a m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 85.58.0 6 3 4 NA 1 5 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6.674735e-07 1.112456e-07 11.91174311 2.40234017 7.21435895 11.06442988 -1.05709145 10.21610911 -0.05709145 10.04421555 11.93406386 8.42267663 10.11719789 7.28719245 8.90723710 10.44473352 5.48205445 9.27940281 10.55253683 10.50752223 7.84074205 6.38583997 10.24781800 11.64290252 13.84583669 9.40539870 9.37334892 10.80437105 7.68436362 10.82592146 -1.05709145 4.11282522 9.18607040 11.63747191 12.94931011 8.11532410 17.68733605 11.88302641 9.10276782 4.67081768 1.52787105 5.80087661 8.54094905 7.05142105 7.67081697 12.61521120 NA 11.74682567 10.97149312 6.36916109 9.36180301 11.51678017 8.11282157 7.82859287 2.11283356 15.26689895 10.52174078 1.52787105 10.35440731 NA 6.26482539 9.89636525 10.12591142 9.96941976 11.03135336 9.91587609 10.79854349 1.75026348 11.09803083 10.31194842 4.58675274 6.91444015 12.33829660 9.91731091 15.28526624 7.84500008 11.09644840 10.78288742 9.63114667 0.94290855 3.80087920 8.19082372 9.07217951 12.84026915 -1.05709145 6.91444015 7.47037336 9.89418114 10.84263092 7.22366678 7.73405924 4.67081768 10.51748988 11.53348344 -0.05709145 13.86017519 4.94289448 6.73731225 12.38622847 15.19904975 12.31712079 7.05663880 10.57543723 10.94254412 9.80720630 11.21377564 4.46645746 8.01167453 12.10497294 9.11782203 0.52787105 9.91802778 9.61973506 1.26483665 3.96748220 11.02704040 8.91731091 10.91802786 9.08755460 15.17960198 9.86696653 10.16206486 8.04618435 4.77578803 15.04429760 11.09549810 13.55622542 12.37099476 10.12653180 9.59932114 8.70776807 10.23953158 -0.0065050 0.3477300 0.3651000 0.2397500 0.2700100 1.1696000 -0.0031859 0.0731150 0.0731150 -0.2554000 -0.2554000 0.7068200 -0.0077482 0.3391800 -0.0056757 -0.0056757 -0.0056757 -0.2504300 -0.0030139 0.2384500 -0.0012473 1.1255000 -0.1932500 3.6569000 -0.2256400 0.4307500 0.4307500 0.2050300 0.0063871 -0.0065050 -0.0065050 -0.0931390 0.2397500 -0.2579300 -0.2481200 -0.0031859 -0.0031859 0.0731150 0.0731150 0.0731150 0.2350400 -0.2687800 -0.2554000 0.0133530 0.0133530 0.0133530 0.0133530 -0.2511600 -0.2511600 -0.0056757 -0.0056757 -0.2504300 -0.0125830 -0.0125830 0.2384500 -0.0012473 -0.2104500 0.0000000 -0.1932500 -0.2602300 -0.2443600 -0.2867900 0.2050300 0.0063871 0.4439200 -0.0123000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 9.75105610 13.04109298 4.07218299 9.46351497 4.33521168 11.49916289 2.40234017 2.11283356 8.15478470 9.33950109 NA 8.18583236 8.26932588 10.64939236 9.11532384 0.94290855 8.09771455 9.56586332 10.89308769 9.77736744 8.39723695 7.70111929 11.30319476 2.26483665 7.52785855 10.79854349 1.26483665 -1.05709145 10.33037521 2.52787105 12.23981256 12.75266450 8.30703091 10.30484012 9.84677818 9.10150616 5.40232653 1.52787105 -0.05709145 NA 8.71932926 9.75827969 10.95027411 4.03036257 10.71432392 7.04092859 9.39307657 6.78210054 8.72425599 -1.05709145 11.96838201 4.15234569 4.49748463 9.46700716 6.15205764 9.09897953 8.97356364 8.92160681 9.71768345 5.49748463 13.39326996 1.26483665 10.41152042 NA 8.96109657 6.28274559 8.70776807 8.49748503 12.472937 6.914440 9.663995 17.687336 10.370733 11.036314 12.615211 11.205285 9.104028 10.154176 13.238522 10.597085 9.072180 7.759880 -1.057091 6.608233 12.022881 10.981815 6.629397 9.200284 8.805534 8.326601 10.137819 7.934418 6.891264 9.405399 6.813260 1.942909 7.965264 7.890329 12.083886 10.832020 8.476226 8.223667 10.024380 8.537221 9.969420 10.238091 11.441995 10.494605 10.607788 9.035654 NA 9.705660 7.597389 9.531611 10.842631 8.566778 10.884920 10.517490 6.959704 13.476591 10.271010 10.524568 12.483146 10.967344 9.145020 4.697785 TCGA-AO-A12E 51 0 NA 1743 breast stage iib t3 n0 (i+) m0 2-10-2014 female 2005 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 80.55.0 2 2 1 3 3 4 3 3 2 3 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 4 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 4 0 4 4 1 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.648133e-06 3.893595e-06 11.1449647 7.9127912 7.4250724 11.5584782 2.5204725 9.6477926 NA 10.0444090 11.7287662 8.7720126 10.0485092 8.3665609 8.5086176 9.6856201 7.2103051 9.6038898 10.1841166 9.4707866 7.4066055 4.6359517 10.3893698 9.6220117 12.2595311 12.0266633 8.9907938 10.3052643 3.5544169 10.2826580 0.4500631 0.4500631 8.6731207 13.1950024 12.0707625 7.2418983 12.9509263 13.9017335 9.7661396 6.2880281 3.6200116 7.4273640 8.5927022 9.0529687 7.4768847 12.9700155 2.9355163 10.1992835 13.0363613 5.4500829 10.4912179 10.8408983 9.9363161 5.0229758 0.1281614 13.7744344 9.8203360 1.7131239 7.6038896 2.0350608 4.5711003 9.7988126 10.8834612 10.5185941 10.8003606 10.2016285 9.5829697 6.2049721 11.4777141 9.9487343 7.2829744 7.9241961 10.9006771 10.4193270 14.5313848 8.3329232 12.1341317 11.3230671 7.7483760 0.7130799 1.2980717 8.2496899 8.7854747 12.3263711 NA 3.2980864 7.4387694 9.9977502 11.3415644 6.7575127 6.2209142 4.4857102 10.2043039 11.6496341 1.8285910 13.5178549 6.6240117 7.4724520 12.3605023 10.7780861 12.9058226 8.3241436 10.5798826 10.3151990 10.1121332 11.2516312 4.6038874 9.1309713 11.1937408 9.9724698 -0.2868321 10.2248715 9.2149560 1.5876050 3.7170238 9.1040043 10.6423773 9.6482839 9.1532959 15.1595883 10.0142339 9.9423383 8.6329752 2.8830342 14.9122544 9.0845326 12.3756389 12.6399090 9.8229495 9.4042807 8.1210947 9.7659133 -0.0047786 -0.0047786 0.4409600 -0.0074045 -0.0074045 -0.0033951 0.4731500 -0.0109920 -0.0188280 0.4504500 -0.0103030 0.4462300 -0.0021492 -0.0021492 -0.4755900 3.6569000 -0.0045019 0.4664700 0.4615200 -0.4912200 -0.0040869 0.0040922 0.4272900 0.4272900 0.4272900 -0.0312920 -0.0312920 -0.0517920 0.4526600 -0.0125730 -0.0047786 0.0000000 -0.0074045 -0.0033951 -0.0010789 0.4511300 0.4511300 -0.0109920 -0.0188280 -0.0188280 0.4397800 -0.0687310 0.0085423 0.0020096 0.0020096 0.0020096 0.0020096 -0.0021492 0.0010384 0.0011771 -0.4837100 0.4664700 0.4437800 0.4160500 -0.4764400 -0.0040869 0.0040922 -0.4954300 0.4272900 0.4272900 -0.4709900 -0.0802100 -0.0517920 0.4526600 0.0134210 -0.4877000 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.457 -0.038 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.440 0.440 0.442 0.442 0.000 0.000 0.000 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.457 -0.038 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.440 0.440 0.442 0.442 0.000 0.000 0.000 7.9720774 11.6228869 4.6200116 10.1560623 3.7696977 10.6682844 2.2156165 2.6517291 9.0069737 8.3093085 -0.8719706 8.2057600 5.0470192 10.2412473 9.3093085 3.1725515 9.8755102 9.6687687 10.8270780 11.0839878 9.8048540 7.8372400 11.6168752 5.0229758 8.9954351 9.5829697 7.0199398 0.9355352 10.3219896 2.9861378 12.4280798 12.0106084 6.9799053 10.0195603 10.8734105 9.3802303 4.2779029 0.1281614 -0.8719706 3.6200116 9.0222163 8.9037665 10.1487891 6.5544216 8.6375751 7.1505241 10.8096144 6.2209142 10.0320381 0.4500631 11.1658749 4.1505272 3.3376112 9.8044705 6.1863104 3.8286011 10.3229132 8.5824555 8.0350470 -1.8719706 13.7323910 -0.2868321 10.2366808 NA 6.9547047 4.8560744 7.7373352 7.9209465 15.3490241 5.8830440 8.6536770 12.9509263 9.7707316 10.7848047 12.9700155 12.2614592 8.9698073 10.9045894 13.1839895 11.4313663 8.7854747 8.4019521 -0.8719706 7.2905479 11.0935799 10.867304 7.186148 8.175280 9.072136 9.776064 10.171095 7.019940 8.304329 12.026663 7.169816 2.215616 6.122509 7.293265 11.395236 9.948335 8.237987 8.850964 13.501531 4.757514 10.518594 10.864347 11.685620 10.047392 10.789044 8.908696 NA 8.798653 7.447829 5.948335 11.341564 4.337611 10.738028 10.204304 6.992466 13.352309 10.425359 10.040297 13.327637 9.672638 9.484058 2.298072 TCGA-AO-A12F 36 0 NA 1471 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 5.562279e-08 11.92735327 7.44479708 6.85418769 10.90729960 0.02970023 10.03304356 NA 8.83281471 11.00942325 6.19968412 9.67541830 8.21628703 8.32284842 9.09045571 7.94065246 9.11456822 7.75541038 11.43117273 8.88462814 4.99938672 9.32896792 9.01370343 12.55642211 10.98104455 9.49123922 10.55299506 1.02977090 10.14523712 0.76672236 1.25217341 8.55201426 11.96897175 12.64898639 7.50007941 12.46647140 12.56600707 9.26258044 8.80124921 4.17271952 8.63214932 9.30820932 5.37553299 7.18288990 7.08504218 0.02970023 11.83751728 10.82255020 7.17950707 9.99966916 9.25134701 8.51625986 5.92053151 0.02970023 12.76498868 9.76841510 4.25215070 10.45672341 0.02970023 4.76672766 8.49055689 10.72208481 9.74457773 9.09315502 9.70454071 9.87838280 11.73841269 11.34641855 10.17271777 2.96836728 7.14870129 3.61472162 9.71684381 15.07977853 8.10757228 11.12735309 11.03561827 10.68230616 3.25215827 -0.55512094 10.06042695 8.64569590 10.29146301 NA 3.08865045 6.21958481 11.45846901 10.34453194 5.70218654 5.10301078 3.44479956 10.11766466 12.12515688 2.14522094 13.31091716 4.51088599 7.39316476 10.69953072 12.65425074 12.87014443 6.08142272 10.95259202 11.06616247 9.91113893 10.49736537 3.35168486 7.95852488 11.44796387 7.50007941 -0.55512094 9.58434866 9.72962142 2.14522094 5.20155545 9.64201414 10.40371253 9.50481780 9.19884968 14.65786361 10.50177370 9.40335018 8.65790148 2.14522094 11.76658456 7.65181160 12.10222746 12.58130793 10.31554732 10.00226103 8.70218516 9.91433744 2.0849000 1.4679000 1.7370000 0.0146090 -0.0114730 -0.3190200 0.0940560 0.0691670 0.0040284 0.0022193 0.0022193 0.9279200 0.5079400 -0.3695200 -0.6718700 3.6569000 -0.6724200 1.6323000 -0.3045100 -1.0522000 -0.3252800 -0.3928600 -0.0074720 0.0828270 0.0828270 -0.2710500 0.1692600 0.1692600 0.8826600 -0.6657100 -0.3108500 -0.3021600 0.0352420 -0.6521800 -0.3061600 -1.0373000 -1.0373000 0.0691670 0.9604200 1.0226000 -0.1963700 1.0629000 1.0857000 0.3580600 0.3580600 -0.6585400 -0.3042800 -0.3695200 -1.0688000 -0.6619800 -0.6756400 1.6323000 -0.3045100 -0.3045100 -0.6638300 -0.3252800 0.0356650 0.0632230 -0.0074720 0.0828270 -0.7055900 -1.1472000 0.1692600 0.1041000 0.0000000 0.1204900 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.675 0.675 -0.196 0.246 0.986 0.986 -0.466 -0.659 0.152 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.675 0.675 -0.196 0.246 0.986 0.986 -0.466 -0.659 0.152 7.37257519 12.91151114 3.99938672 9.85100236 0.15846630 12.78353376 -0.55512094 1.02977090 9.14697005 7.84354110 3.93664736 9.44402925 0.02970023 11.22697658 9.18119923 5.25215070 6.72092140 10.38143534 10.34188648 10.29185469 8.38537538 7.12075420 12.04191879 1.90423359 8.53358554 9.87838280 3.53225461 NA 10.16803173 0.02970023 13.92943148 13.06696361 7.81330406 9.70571687 6.82850211 10.50684350 4.76672766 1.90423359 0.76672236 1.02977090 8.63832259 10.84460935 6.30898332 6.26497548 9.02286795 5.92861430 10.34867925 6.62967281 10.99770656 2.96836728 10.56633085 3.02975323 4.30277965 10.86344851 6.45025284 4.37553299 8.74743641 6.48371583 5.72092140 6.15904382 13.82424343 -0.55512094 10.37331575 NA 10.19550435 4.55332364 8.00513047 7.22287410 12.956016 7.966398 8.085042 12.466471 9.182045 11.418315 7.085042 11.071419 8.572792 11.241243 13.275511 11.539535 8.645696 9.114568 3.730194 7.604669 11.317087 11.13217305 6.16589586 8.93761187 9.27768749 9.15818376 10.32155982 4.32744306 4.67361861 10.98104455 4.95258984 -0.55512094 11.09360434 8.97422786 11.83657797 9.36067680 8.60466886 8.54677294 9.79959765 3.99938672 9.74457773 10.01275344 12.47330781 11.39407694 10.35469050 8.22451690 NA 8.97515496 9.30738822 4.85419019 10.34453194 7.65668585 10.38767832 10.11766466 6.76221060 14.50354889 10.29342026 9.92103727 12.89129916 11.09225581 9.61847452 0.02970023 TCGA-AO-A12G 75 0 NA 1266 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2006 NA NA other specify yes 0 white not hispanic or latino 80.55.0 5 2 4 3 2 4 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.112456e-07 11.3108400 6.4659745 9.5736472 12.1364785 -0.3219281 9.2973749 -0.3219281 9.7231490 11.3527056 6.4594316 9.2441259 7.2630344 8.7374164 9.8795832 7.3146965 8.6467387 10.3228295 9.2297802 6.9772799 3.4329594 9.0959244 10.8246406 7.3327079 10.7465143 8.7508744 10.1292830 5.4059924 10.4337941 -0.3219281 -1.3219281 7.5235620 10.9815673 10.6794801 7.3540289 13.3924784 12.4717768 8.7319978 6.2630344 3.0000000 6.5909612 7.6724253 10.4862317 7.1085245 12.8543230 -0.3219281 9.9200551 13.4443938 5.1375035 9.6040046 10.8981479 5.1858665 5.8176233 -1.3219281 13.1993288 9.3584314 1.4854268 7.8529976 NA 4.7865964 9.6794801 10.0709259 9.1487308 12.4862317 10.1497471 10.3219281 6.0617762 10.5853382 9.5290401 7.7761040 7.7865964 5.8176233 10.6875507 15.1913523 6.0631578 10.1744264 10.7282607 9.2162608 1.8479969 5.8278190 7.8801957 8.9212459 10.8685139 -0.3219281 5.6205864 6.8278190 9.7025190 10.1282522 7.1538053 5.2172307 3.9634741 10.4329594 11.3008101 0.2630344 13.1232808 5.0531113 7.1251551 12.0744091 12.0279060 12.4345240 8.6865005 10.6610655 10.9818527 10.5026329 10.6227840 4.5109619 8.5453506 12.2969162 13.2027360 1.0000000 10.4283602 9.9431008 1.4854268 2.3829439 9.9778523 11.2969162 9.7176764 8.9116916 15.2935722 10.2649117 10.7592224 6.1699250 3.3219281 16.8169986 5.9634741 12.5408061 12.2089659 9.6858000 9.6452982 7.7575567 10.2855132 -0.00263220 0.49352000 0.55319000 0.01209700 -0.00249380 0.02955900 0.03608800 -0.00479990 3.65690000 -0.61911000 0.00402430 1.13400000 0.00555290 -0.61585000 -0.61623000 0.80150000 2.03930000 -0.00761010 -0.00761010 -0.21404000 0.00000000 0.01586600 -0.60381000 -0.01491600 -0.01491600 -0.01587900 -0.01587900 1.02480000 0.00972760 -0.00263220 -0.00263220 -0.00456950 -0.61652000 -0.26107000 -0.61460000 -0.00362090 0.00291330 -0.00479990 -0.00479990 0.00055459 -0.63538000 0.00833510 -0.61604000 0.00513590 0.00513590 0.00513590 -0.61393000 -0.61585000 0.03877100 -0.61623000 -0.61403000 -0.00761010 0.00434160 0.00434160 -0.21404000 0.00000000 -0.00121540 -0.61498000 -0.62436000 -0.01491600 0.01377200 -0.38694000 0.53186000 0.00972760 0.00680440 0.58112000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 8.6865005 13.2555597 6.7708290 9.4362951 2.7467427 11.4161642 0.2630344 NA 8.8189017 8.3183168 -1.3219281 8.2094534 2.4854268 10.7176764 8.7018263 0.2630344 7.9588427 9.3065174 10.3544698 11.2290591 9.1426993 7.4329594 11.6562461 2.7655347 8.3146965 10.3219281 4.9068906 NA 10.7374164 1.0000000 13.1135468 12.7228075 8.8290884 10.2312212 7.5077946 10.0095487 4.8678965 1.6780719 -0.3219281 3.1375035 9.0628557 10.1719274 9.9738408 4.5849625 8.8674394 5.9541963 9.9852727 6.8278190 9.8105716 NA 11.1927860 2.3785116 4.8875253 9.8847505 6.6844260 3.7224660 9.4008794 7.6322682 6.6553518 2.1375035 14.4235887 1.6780719 10.0964516 -0.3219281 7.7602209 5.7114949 7.8972404 8.1022382 12.1296140 4.8073549 8.9068906 13.3924784 9.8041310 11.0476693 12.8543230 11.8044537 10.8083207 10.6340850 12.5867460 10.6308132 8.9212459 11.5605239 0.6780719 7.5391588 10.2728630 10.506605 6.694880 8.758889 8.419539 7.965784 9.709546 6.392317 5.733354 10.746514 8.037821 1.847997 6.104337 4.691087 11.056638 9.358431 7.979568 8.268659 11.702519 4.847997 9.148731 10.343852 10.946614 9.691395 9.806711 8.431289 3.584963 8.787341 6.700440 5.523562 10.128252 6.177918 9.900867 10.432959 6.954196 14.560261 10.698705 10.523562 12.992443 10.161384 8.332708 1.263034 TCGA-AO-A12H 69 0 NA 863 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA mixed histology (please specify) yes 0 black or african american not hispanic or latino 85.58.0 3 5 2 NA 2 4 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.112456e-07 11.92559653 0.98112199 8.33868068 12.17270183 NA 10.36303185 -0.01887801 9.72147144 11.72427987 9.23221632 10.24986543 7.98112827 9.61230550 8.97265044 9.66704535 9.12663608 10.73462385 9.81665266 6.06150189 -0.60384051 10.05080205 9.23063702 14.21327456 7.96412192 11.73448452 11.01546893 3.39615949 10.00069610 -0.01887801 NA 6.27268203 9.49288105 13.82174252 8.43919342 12.15968960 12.43910780 9.70051723 6.64409421 2.64408700 4.46225522 8.09487049 8.31204522 5.77986903 14.69948297 -1.21424023 10.13341338 14.81903560 4.95075301 10.04397969 10.72876201 7.32394375 8.95840829 -1.60384051 14.39868831 8.52283180 0.71808758 6.95075534 -0.60384051 3.15104699 9.52416028 10.03233741 10.56044442 9.46896854 9.64587203 9.69994666 -0.60384051 10.77066216 9.91531070 6.56107253 6.39051980 -0.01887801 11.51947910 14.72364846 8.22714082 11.84505663 10.84737710 7.55603696 NA 5.89601264 7.53827276 8.18895621 10.25686501 1.71808758 5.49419797 7.23536998 10.68185718 11.38626992 3.95075767 4.44056025 3.39615949 10.73907402 11.87909997 4.46225522 13.32097848 6.07564601 7.68387818 10.29816421 9.31279199 12.29164661 8.72484090 10.04002212 10.67083529 10.75128303 10.34234118 3.98113113 8.01271504 11.81954457 12.56507311 0.98112199 10.23615702 8.77770901 1.20351441 3.10269172 9.56044442 10.78794662 9.62438351 9.12153222 15.47111229 10.58011146 9.61412363 8.45144852 2.30305008 16.63261002 6.89202059 12.87638817 10.76930305 10.30942940 9.29098370 7.99793705 10.37765835 -0.00067222 -0.00067222 -0.00828820 0.00210140 -0.00229850 0.03964100 0.00432300 -0.00219600 -0.00219600 0.01253700 0.01253700 0.01253700 0.00224010 0.00224010 -0.00191910 -0.00191910 -0.00191910 0.00099147 0.00099147 -0.01048700 0.00279540 -0.01131500 -0.00108790 -0.00108790 -0.00108790 0.00974860 0.00974860 0.00974860 -0.00510200 -0.00067222 -0.00067222 -0.01592800 0.00210140 0.03964100 0.03964100 0.00432300 0.00432300 -0.00219600 -0.00219600 -0.00219600 0.00738180 0.00000000 0.01253700 -0.01172800 -0.01172800 -0.01172800 -0.01172800 0.00224010 -0.01548800 -0.00191910 -0.00191910 0.00099147 0.00099147 0.00099147 -0.01048700 0.00279540 -0.01131500 0.00196260 -0.00108790 -0.00108790 0.00335070 0.00974860 0.00974860 -0.00510200 -0.00261140 0.00571280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.74710539 11.12960508 3.20351441 8.72034653 2.45362293 10.46360039 2.09659921 NA 8.30004774 8.76576346 0.71808758 5.98862334 0.98112199 10.47731649 9.32985665 -0.01887801 3.30305008 9.29401138 10.60226460 11.62753717 9.65155457 7.72708318 11.47164514 3.82243444 9.87139274 9.69994666 2.48362233 2.48362233 11.06261190 3.15104699 13.20618525 12.33464291 7.28186235 10.53954920 8.47831500 9.22668120 2.56608449 2.98112199 -0.60384051 3.75372219 9.27037897 10.56546466 10.31540173 1.20351441 7.23111075 7.53315683 10.45246499 4.41853405 9.64052983 NA 9.94883501 1.98112199 8.72484090 9.86801905 7.03402198 0.39615949 8.86885681 7.22588897 9.48561641 -1.60384051 14.25482697 0.71808758 11.16517728 -0.60384051 8.57856026 5.48362878 7.92559657 9.87544097 13.444879 5.871900 8.874936 12.159690 10.669915 10.411232 14.699483 6.332805 8.789556 10.315774 12.673526 11.221721 8.188956 9.744341 0.981122 7.515107 13.277184 10.7073466 8.3342755 8.6031801 9.2734502 7.1376326 10.1124881 5.7537168 9.8234789 7.9641219 7.6297857 4.3734464 4.0966076 6.5855455 9.2703790 10.5970646 8.8463463 9.3157743 10.5424164 2.0965992 10.5604444 10.7349024 13.4597717 8.6345708 10.4504311 8.5318754 -1.6038405 8.5820324 5.7052343 2.0965992 11.3862699 5.4941980 11.5885081 10.7390740 6.7581099 14.2987060 11.0445236 10.3386805 12.3885733 9.5692184 9.3269033 -0.6038405 TCGA-AO-A1KO 46 0 NA 448 breast stage iib t3 n0 (i+) m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 2 1 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.946798e-07 10.7651878 9.8323775 7.2437043 10.3723502 2.3272275 11.2492669 1.5902427 10.5444584 11.7438141 8.8705173 9.9026409 8.6539568 8.2228533 9.9320898 6.8715480 9.3098410 9.9375143 9.9051600 9.0980568 3.3745387 10.2393187 9.7149579 13.3055091 10.5295148 10.1905881 10.7086265 4.4647336 11.2006718 -1.5794906 3.1752212 8.5327767 14.7727082 13.4829736 8.2179984 11.7593520 12.4251720 9.8217499 7.7354870 4.9281334 7.5927650 10.1495330 11.2196187 8.4287659 10.1133883 4.7953773 9.7773392 11.5986907 7.8591291 9.1918266 10.6154017 8.2999205 4.6297879 NA 12.8402354 7.3540281 4.3029770 8.7579590 3.1207832 4.0053012 10.5767362 9.9136922 10.1727178 11.8889612 10.7337871 10.0984971 -1.5794906 12.4063569 9.9136922 5.0641931 7.7011082 9.2991544 9.4118590 14.1581126 7.9944575 11.8587391 11.9826988 7.6370827 2.2276795 2.2276795 9.1138239 9.8899789 13.6923836 -1.5794906 1.2276795 6.2532273 10.2204281 11.7948333 9.5515510 7.1033319 2.8797646 11.0162939 12.5224769 0.4202937 13.0282453 4.2532254 7.6443387 12.4375805 10.3679740 12.9599806 6.7377503 10.0812244 11.4100864 11.6105785 11.7725185 5.7149571 7.9101852 11.6830192 10.2630803 0.4202937 9.6929669 9.7729323 1.7422650 3.5128842 10.3628516 11.1414363 10.5001552 9.0551482 14.8323114 10.5707191 10.1951241 8.4061791 6.1345824 14.3559856 9.5196850 12.8730288 13.1104988 10.1789768 9.7674047 8.8848830 9.5821491 0.04188300 0.04188300 0.04188300 -0.00550800 0.05067700 0.00000000 -0.00346270 -0.00137680 -0.02411400 0.00319100 0.00319100 0.00319100 -0.00069303 -0.00107180 -0.00401620 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.01062300 -0.00097017 0.00180300 -0.00373950 -0.00373950 -0.00373950 0.00277450 0.00277450 0.00277450 0.00221930 0.04188300 0.04188300 0.00360760 -0.00550800 0.00000000 0.00000000 -0.00346270 -0.00346270 -0.00137680 -0.02411400 -0.02411400 -0.00193990 -0.00193990 0.00319100 0.00362910 0.00362910 0.00362910 0.00362910 -0.00107180 -0.00107180 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.00512270 -0.00719580 -0.00137080 0.00180300 -0.01642900 -0.00373950 -0.00373950 0.00458000 0.00277450 0.00277450 0.00221930 -0.01739100 0.00388540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.8360788 11.5041488 6.0202510 9.9701217 3.1207832 10.2135339 -1.5794906 4.9281334 8.2548080 10.8892156 -1.5794906 8.3172145 4.6871223 9.4729052 9.3488554 1.5902427 10.2806482 10.8712905 10.2771516 9.8513123 9.7141478 8.6824318 10.2094631 2.2276795 9.3969012 10.0984971 7.4061786 NA 8.5444583 4.5700864 13.8289986 12.2473820 7.6563512 11.1279119 8.0962940 8.9091815 8.6491559 2.3272275 -0.5797063 -1.5794906 7.8466018 6.7286756 8.4076013 6.6824314 8.5584425 4.3510770 10.2179986 6.9977655 10.1168700 11.6491558 12.2640619 3.8797646 6.0927635 9.6810509 4.8249664 6.2147524 8.5077998 8.6212358 7.1584289 -1.5794906 14.5958477 3.0052922 10.1702065 NA 7.7888436 7.5827284 8.1380137 8.7456424 11.8338659 4.2016966 8.8190809 11.7593520 10.7153225 10.3875634 10.1133883 12.2871331 9.4749414 11.4998219 13.8083880 13.1507011 9.8899789 7.8169420 -0.5797063 8.3075579 11.3204491 10.979475 7.016526 8.979714 9.444784 7.737750 9.897564 5.920184 6.481032 10.529515 3.943903 6.742265 9.327979 6.374010 12.898222 10.951962 10.371258 6.590262 12.220630 6.497152 10.172718 10.252436 12.322335 9.729813 11.190175 9.215565 NA 8.573965 8.273366 8.060582 11.794833 6.491800 11.321483 11.016294 7.230909 15.143838 10.130283 10.870260 12.837992 9.616324 10.268960 5.188520 TCGA-AO-A1KP 77 0 NA 2513 breast stage iia t1 n1 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 5 2 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.668684e-07 9.981033486 3.051250277 7.539243354 10.689316285 NA 11.008460627 NA 9.745565593 11.052143874 10.072278005 10.526002965 8.167274622 9.085986506 9.005438727 6.895226267 8.999843324 8.796479653 9.796479815 7.671829046 -0.592701640 10.677681592 8.384666344 12.958253307 6.678849398 10.024394485 10.846437998 3.799698664 11.045595933 NA 3.899243316 6.332199500 10.089942066 13.462583978 7.915180862 11.780795272 13.343656153 8.734938875 7.355753673 1.729313480 9.057540438 8.963892248 8.870910559 7.344024212 13.387525864 1.407407140 10.274665033 15.450883573 1.992333382 10.510713440 11.714587087 6.854469484 4.616839926 1.214746523 12.291025242 4.616839926 2.494850785 6.874992410 -0.007666618 2.577320055 9.524379905 9.732129428 10.895477433 11.380186624 10.422801383 8.828399288 6.531507788 11.710738946 9.661824406 3.764940573 8.078042435 2.494850785 11.189155799 12.845658342 6.926786991 11.667129553 11.395715934 9.980560041 -1.592484088 7.459954501 8.349900863 8.984815181 11.049889312 0.407407140 6.029437425 6.981032915 11.257182327 10.972964426 4.451778186 4.384664618 2.577320055 10.610734292 12.796681518 2.494850785 13.329970695 5.338124862 8.148853286 11.900616314 12.243041998 13.194472611 8.564733311 9.775347066 11.481527766 11.354659759 10.141248973 4.028852006 8.762737478 11.492526748 12.669701409 -0.592701640 9.971059221 10.190793853 0.729356990 3.801417366 9.233140057 11.948240808 10.932907138 8.660051887 14.763975816 10.320649729 9.204237085 9.417914313 0.729356990 15.244299601 8.470781279 13.180628548 11.317091929 10.257573118 9.609510095 8.857566472 10.102061915 -0.86837000 0.83608000 0.82689000 0.01084200 -0.00142780 -0.01119800 -0.00318590 0.00027728 -0.56823000 3.65690000 3.25760000 1.83300000 0.02918400 0.04245300 0.00845470 0.01382600 0.01382600 0.01175200 0.01175200 -0.01050800 -0.02068700 0.06923900 0.09827000 0.09827000 0.08045600 0.06293700 0.06293700 0.06293700 0.16640000 -0.84563000 -0.86837000 -0.00980530 -0.00142780 -0.01119800 -0.01958900 -0.00318590 -0.00318590 0.00027728 0.00027728 -0.02356600 -0.01202400 0.79917000 -0.89603000 0.01630900 0.01630900 0.05736800 0.05736800 0.04245300 0.04245300 0.04004400 0.01382600 0.01175200 0.01175200 0.01175200 -0.01050800 -0.02068700 0.06923900 -0.86185000 0.09827000 0.08045600 0.01126100 0.06293700 0.06293700 0.16640000 0.00889200 -0.88604000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.278 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.121 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.796 1.692 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.278 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.121 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.796 1.692 0.000 0.000 0.000 7.413010950 10.475828662 8.311268321 9.763838284 3.764940573 10.590401321 1.407407140 NA 8.481527816 8.266920967 -0.007666618 7.836918867 1.407407140 10.785410127 9.746679575 3.051250277 10.195288904 9.928005013 7.954280659 10.629275466 9.260656838 7.626554489 9.214741181 -0.905628789 9.710596212 8.828399288 3.051250277 -1.592484088 10.329599033 5.891202864 13.565522577 10.775619910 7.168937820 10.479518878 7.690474366 9.190384483 2.930945449 2.930945449 -0.007666618 3.899243316 7.919139231 7.025771883 11.325504135 2.107821756 7.432221173 5.135305018 10.958133113 5.816776321 10.205452997 NA 8.665952307 0.729356990 4.022092565 10.303760317 5.910893325 0.407407140 9.378211175 4.407386744 3.799698664 0.729356990 14.349236293 NA 9.609510095 -0.007666618 7.901241619 6.072723231 8.993287712 9.584805825 13.605234 5.764938 9.263812 11.780795 10.035914 11.155579 13.387526 11.239881 9.145479 10.500143 13.396736 10.561571 8.984815 8.757220 1.992333 8.011013 12.286395 10.769330084 7.579813723 8.724798953 9.928005013 8.755007722 11.073079728 1.992333382 4.850329381 6.678849398 6.786764928 3.961975162 7.988586989 6.717317247 9.055743916 10.475156744 10.045822172 7.518521763 12.019333230 3.214746523 10.895477433 11.232941367 11.434255518 8.365939193 10.606445097 8.060231169 NA 8.227836362 8.494849186 3.314275980 10.972964426 6.332199500 10.250914807 10.610734292 6.747235656 13.510469159 9.897735813 11.212525567 11.489036141 9.769878166 10.654423726 -0.007666618 TCGA-AO-A1KQ 84 0 NA 1882 breast stage iiib t4 n1 m0 2-10-2014 male 2006 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 1 5 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.33278563 3.91874877 6.62988842 10.57095724 -0.03549047 10.10538187 0.96458346 9.21485044 11.15097581 9.61918812 9.28422423 7.46040675 9.34284694 9.08738010 8.11429934 9.62365602 9.56167344 10.17765623 7.51914086 3.91874877 11.02152838 9.61739694 13.24959296 11.42475191 9.18975959 10.59481920 7.95890530 9.74908050 -1.03534261 3.28648199 7.36115687 9.92237954 12.53985490 7.06783982 12.50710030 12.66585851 8.80217997 7.24995440 3.28648199 8.01712019 8.89824282 10.71484033 6.63697691 12.86438098 3.13448382 11.07144212 14.12138566 0.96458346 10.70135984 11.04503649 6.29546958 6.47234642 -0.03549047 14.38495608 8.72776427 0.54952132 6.86541903 NA 3.96455574 7.27289101 10.73232271 9.36969352 10.02592328 9.32868659 9.63520824 -0.03549047 10.65236513 9.77592677 6.10410388 6.31328032 4.48811649 11.32347793 14.05313327 8.72488931 10.70896548 10.94968243 9.37712180 1.54952132 3.96455574 7.10921010 8.15437663 10.04536952 -1.03534261 5.63697836 8.31549106 10.06980580 10.70854490 7.24532262 6.57188307 4.24995346 9.56167344 11.70580835 4.57926464 13.25118199 7.33523938 7.10410388 11.26290108 12.37923729 12.47679867 7.96736692 10.71776877 11.11112073 10.61335899 10.13885363 3.35687624 9.98136035 11.98709326 9.09640893 -0.03549047 10.76423841 8.85177277 -1.03534261 2.56149722 8.68394098 10.60162967 8.83645722 9.43215769 15.56343327 11.02254377 9.80217997 8.55887679 7.38661698 15.29837127 9.01167593 11.26175493 11.24908702 9.99659777 8.92020188 7.45239199 9.96850552 -0.3634000 0.4403700 0.4592200 -0.4350800 0.1158000 -0.1181400 -0.3916300 -0.0359930 -0.5088800 0.5162900 0.6351800 2.3169000 0.0942010 0.1197600 0.1099400 0.0445740 0.0445740 1.0515000 1.1936000 -0.8557500 -0.0223810 0.2065600 -0.4230900 0.7147100 0.7147100 -0.2273600 -0.2273600 0.6929700 1.2623000 -0.3634000 -0.3634000 -0.4156400 -0.4309400 0.3723200 -0.0533410 -0.0851920 0.4576800 -0.0359930 -0.5088800 0.1005100 0.3928000 -0.0094046 -0.3267000 -0.3876100 -0.3876100 -0.3876100 -0.3875000 0.1197600 0.1858600 0.0268060 -0.4368000 0.0441480 -0.1758800 0.1999900 -0.4840700 -0.4248400 -0.2332500 -0.5157900 -0.4230900 0.7147100 0.2509000 -0.0060179 -0.2273600 -0.1534900 0.0164250 -0.8971800 0.000 0.000 0.000 0.000 0.652 0.122 -0.107 0.000 -0.233 0.136 0.136 0.292 0.715 0.251 0.251 -0.221 -0.221 -0.363 0.459 1.146 1.262 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.388 -0.388 -0.142 0.000 0.000 0.000 0.000 0.652 0.122 -0.107 0.000 -0.233 0.136 0.136 0.292 0.715 0.251 0.251 -0.221 -0.221 -0.363 0.459 1.146 1.262 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.388 -0.388 -0.142 8.79268847 11.95571953 7.34825632 9.06652758 2.96454650 10.72568765 2.96454650 NA 9.28873252 6.82253259 NA 6.96263462 2.54952132 11.13134280 9.32539923 4.05201586 7.50371048 9.08738010 9.54857495 11.39238864 9.99703859 7.24532262 10.02051234 0.89437155 8.62988806 9.63520824 3.54950900 -0.03549047 11.31935239 3.54950900 13.17818790 12.41434553 7.03601422 10.20295675 9.89455011 9.90266136 4.63697836 2.28646720 0.96458346 9.35794254 8.72610335 9.82253307 9.83722692 3.05201586 5.48811328 8.37817996 10.74427136 4.82253132 10.53630473 NA 9.39604964 NA 4.35686920 10.06979922 7.21527671 6.12442326 9.43927198 7.72610301 7.39500451 NA 14.13600252 -0.03549047 10.71274485 NA 9.58934741 4.54951516 7.28648014 7.36115687 14.2815869 4.9418340 9.2242952 12.5071003 9.1307152 11.1187372 12.8643810 12.1626901 9.0860855 10.4964208 12.6411703 11.3237525 8.1543766 8.6873596 0.9645835 8.0144005 11.3892432 10.3395915 6.0625837 8.7475338 8.7244402 10.1957733 9.3764549 6.9418317 8.0520148 11.4247519 5.6787987 3.2864820 6.6580386 8.4767790 8.9026615 9.8053300 9.2441626 9.8766928 8.2289947 6.1642251 9.3696935 10.6779386 11.2257655 9.2005661 10.0373546 7.3395917 NA 8.6049053 8.4557637 6.8287382 10.7085449 7.1344766 10.3110657 9.5616734 7.0413678 13.7202742 10.6200828 9.9121889 12.3010586 11.1104842 8.5644651 0.9645835 TCGA-AO-A1KR 51 0 NA 2141 breast stage iia t2 n0 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.526373e-06 6.244252e-07 11.7875423 4.7417852 5.9744444 11.5013380 NA 8.4366628 -0.5801375 7.9590131 10.5026688 9.0691106 9.0197672 6.8792867 8.3885215 9.5910314 8.3146721 9.1847261 9.5809864 10.1098525 7.5645131 5.8121722 11.3304972 10.8976128 11.9492851 11.1072302 9.3623691 9.7730014 5.9744444 10.2207544 NA 4.2272097 5.5491362 10.1503246 13.4339622 5.3267459 12.9441514 12.5111246 10.1133415 7.2653450 1.7417905 7.2590587 8.6866409 8.1341003 7.6630286 6.5073174 NA 11.5869590 11.8596854 8.5231424 10.5986625 10.9056838 6.6866406 3.8792843 NA 13.6415360 9.2175160 1.0048250 8.5283791 NA 3.2272020 6.2400338 9.0726994 9.0400743 9.5935317 8.6244256 9.8720957 3.0048250 10.2708227 10.3297476 4.6677843 6.7236350 6.3505927 7.8627979 14.2169587 6.6381521 9.8955880 10.6977231 10.5020035 4.0637100 4.6677843 9.4170339 8.7190626 11.9739637 0.4198625 -0.5801375 8.8976129 9.2824919 10.4429157 6.2012143 5.2527449 2.2272174 8.7350042 12.1611108 5.3971355 12.3807615 5.0345635 5.7597045 11.7270553 13.1383874 11.9744434 5.8955886 10.9797096 10.8040987 9.3942691 10.4394453 2.4198625 9.5296851 11.8369159 7.6438562 NA 10.6176856 8.6022490 1.4198625 5.3027431 9.3192115 11.8249960 9.1306609 9.3667609 15.3540752 11.3047882 7.8078720 9.4071186 NA 11.3805805 6.8292458 11.2723840 14.1192643 10.5119510 9.9286396 7.7552448 10.0400743 0.03533500 0.93752000 0.93549000 -0.00761010 1.14380000 0.00000000 1.09560000 -0.17398000 0.38982000 -0.34102000 3.65690000 3.65690000 0.30170000 1.16980000 -0.30500000 0.00027728 0.00027728 2.02750000 0.01126100 -0.34169000 -0.31622000 -0.02068700 -0.34343000 -0.02315500 0.33869000 0.21024000 0.21024000 0.23876000 0.07685400 -0.00968060 -0.28988000 -0.06356900 -0.33699000 -0.02534600 -0.36170000 -0.32530000 -0.32158000 -0.17831000 0.02286500 0.33804000 0.01377200 0.27789000 -0.34102000 0.10191000 -0.31494000 -0.31762000 -0.32434000 -0.00747200 -0.03054000 0.08319800 -0.01504200 0.39621000 0.01126100 0.01126100 -0.31190000 -0.31622000 0.60955000 -0.29756000 -0.34343000 -0.33272000 0.02104300 -0.35396000 0.22314000 0.00958830 0.04089200 -0.00581400 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 0.000 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 0.150 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 0.000 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 0.150 7.0709066 11.3816659 5.0048160 7.8833789 2.6783649 13.3397420 -0.5801375 1.4198625 9.6725199 9.4099586 NA 7.6146112 4.3740518 11.0257969 9.6329587 4.0637100 3.3267387 9.1115981 9.5797259 12.4845973 9.0160444 6.5178867 10.5555638 0.4198625 7.2207546 9.8720957 4.0637100 NA 10.4771694 3.4198490 14.7190983 13.5616424 6.1063546 8.5922821 10.2264041 10.6665951 3.8121696 0.4198625 NA 1.7417905 9.3342395 10.8690032 8.5947803 3.1203022 10.7525513 8.7707937 9.6630284 4.2272097 11.2142704 1.4198625 12.4209108 NA 5.9434174 10.4705603 8.0224793 4.0637100 7.5387958 5.3505927 7.5491378 6.8627985 15.2463285 -0.5801375 10.7790550 NA 9.9667490 2.4198625 8.1847261 6.3623682 11.509047 9.645062 7.691318 12.944151 9.834540 11.702653 6.507317 7.639023 8.974443 11.847429 13.047616 11.046932 8.719063 8.663029 2.419862 8.137531 9.814317 10.259846 1.419862 7.899635 8.909703 7.943416 9.008906 5.147775 4.419856 11.107230 10.405696 NA 9.546559 8.490110 8.347632 8.326745 9.194642 9.560684 4.326746 5.201214 9.040074 10.077173 11.283266 9.460144 10.387081 6.338719 NA 9.410866 7.161321 7.188039 10.442916 4.374052 11.157524 8.735004 7.464248 14.772139 10.417740 9.990659 11.722493 12.060551 8.841919 4.277836 TCGA-AO-A1KS 69 0 NA 16 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 109.61.0 NA NA 1 4 NA NA 1 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 3.059253e-07 10.293352 7.436130 8.046564 10.520675 NA 11.393520 NA 11.094669 11.919023 6.285350 10.609111 7.896562 8.998897 8.763554 6.592532 8.120384 9.640515 10.876413 7.587583 5.511231 9.876413 8.597464 12.825757 12.285541 9.543537 11.130628 5.333445 11.769166 -1.597278 4.402709 8.755854 11.670372 13.812695 7.226074 12.208552 12.980313 8.356904 6.866232 3.260688 5.273072 9.060919 12.168097 6.636327 14.072450 3.210062 9.025674 13.954235 5.368492 9.036611 11.864187 5.521648 7.955376 NA 12.829030 5.222886 1.724650 7.882488 12.906036 3.612164 11.164466 11.662156 10.333445 11.770122 11.080207 8.823720 -1.597278 12.477016 9.849274 1.724650 6.150901 11.768620 12.183247 13.003375 8.150934 11.053759 12.801651 8.192241 -1.597278 5.447100 8.684637 9.932138 11.811037 -1.597278 5.046565 6.505996 10.926759 12.261660 4.572635 6.733624 3.210062 11.297146 12.516368 2.490159 13.133071 3.724639 7.729137 11.501068 10.178729 12.728575 7.032063 9.825298 11.947068 11.474930 10.992826 5.592532 8.032064 12.248295 12.311850 NA 9.516449 9.717857 -1.597278 2.491879 9.620665 7.920377 10.609722 9.110929 14.074939 10.580438 10.789647 9.653006 6.799311 15.699534 9.865721 12.901120 12.242206 10.476179 9.078664 9.128925 9.712752 -0.553170 0.336170 0.367720 -0.153110 -0.075478 -0.168150 0.184340 0.198930 0.162800 0.414460 0.414460 1.794700 0.272530 0.272530 0.619330 0.619330 -0.612420 0.231070 0.231070 -0.160390 0.678580 -0.703970 -0.608440 0.306010 0.306010 0.176790 0.176790 0.176790 3.656900 -0.553170 -0.553170 -0.518050 -0.607190 -0.168150 -0.177460 0.184340 0.184340 0.198930 0.162800 0.162800 -0.108150 -0.108150 0.414460 -0.166250 -0.166250 -0.459660 0.429230 0.272530 0.272530 -0.629600 -0.612420 0.231070 0.231070 0.258550 -0.187730 0.080976 -0.150780 -0.597010 -0.608440 0.306010 0.137170 0.176790 0.176790 0.285280 0.095798 -0.453290 0.273 0.273 -0.010 -0.630 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.182 -0.182 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 0.273 0.273 -0.010 -0.630 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.182 -0.182 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 8.37712201 11.04317811 6.19712231 8.91742131 2.35225005 10.23994096 -0.59727782 NA 7.82266770 7.62670852 -0.01231532 8.91155168 1.21007710 10.09095754 9.62005905 2.79501881 9.02567417 10.99912996 9.54800248 9.41742513 9.64023391 8.29903947 9.22288617 1.46445917 8.83315986 8.82372007 1.21007710 NA 10.09139466 4.59252880 11.51856371 11.69272608 8.37137416 11.33085544 9.10314694 9.34888237 6.86623171 2.10316189 0.40272218 7.01373246 6.85803447 5.04656527 10.16093040 4.63152341 8.21191262 5.59253179 9.72407160 7.22288665 9.64349854 NA 10.66127324 1.21007710 4.23559687 10.43016398 4.51332019 2.65062672 7.98579015 8.21809045 7.34228628 NA 13.20714078 1.40272218 9.09619411 NA 8.77883246 5.06092069 9.13487472 9.08833217 14.182059 6.858034 8.864187 12.208552 9.560143 10.786681 14.072450 11.768073 8.618240 11.629119 12.987846 10.882235 9.932138 8.035703 1.724650 7.812098 13.403455 11.195701 7.482192 9.281524 9.959213 9.842019 11.285259 4.531993 9.054656 12.285541 5.130626 NA 5.631526 8.146330 11.455105 10.685217 9.993762 5.333445 12.844484 5.886523 10.333445 10.930917 11.952011 9.263018 11.025217 9.174197 10.702488 7.823720 7.727878 4.333445 12.261660 6.799311 10.601459 11.297146 7.306589 13.107259 10.006797 10.233222 12.660463 11.019486 10.050166 2.926265 TCGA-AO-A1KT 78 0 NA 541 breast stage iia t1 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 1 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 3.615481e-07 12.7561852 3.1241958 7.1999030 10.6708212 NA 10.5616938 1.5881329 9.0959344 10.8274997 11.1999025 10.1809707 6.9136697 8.6903780 9.7670537 7.7174228 8.6713532 8.1085621 9.5034219 7.1969493 1.5881329 9.8145522 10.0581886 14.5982134 10.6499161 8.6924767 10.2334381 4.5141412 9.7230797 -0.7338431 3.1241958 8.3483608 11.1402326 12.4843966 7.8169587 12.8947143 12.3850718 10.3292698 5.3642432 2.1730954 8.5058104 9.2941178 6.3160606 7.8073085 12.4387175 2.7897710 10.2756906 14.2688950 5.9666519 10.2520538 11.3480281 7.7740062 6.5329979 1.9666519 12.9194981 10.1613743 2.3536620 8.1427289 -0.7338431 3.1730954 9.6254122 9.9596987 10.6769281 10.2323568 8.6270589 10.2809298 3.6237615 10.9082635 9.6777228 2.4361352 7.7995413 8.2101916 7.8772369 15.0514983 6.8858818 11.2171322 10.5881400 7.9262076 1.8511594 5.0735675 7.9333236 8.3010109 9.4817447 0.2661569 7.4658839 7.1179610 10.4649638 10.7371249 5.7008392 5.7500276 4.6924774 9.5545012 11.5788112 4.7580633 14.3325323 5.8955692 7.7174228 11.6103690 13.5537078 12.3867737 8.5756882 10.8279771 10.3925937 10.1591492 10.1093478 3.8208019 8.9941322 10.9787388 11.9510700 -0.7338431 10.5303612 9.5277192 2.8511793 1.8523585 9.1519083 11.1203010 9.3187798 9.7645625 15.5902693 11.0530940 9.8398590 6.7132944 5.0735675 15.6637946 8.0895792 12.1716928 10.9896595 9.8707651 9.1700936 7.5813610 9.6411372 -0.0890140 0.4665600 0.4665600 0.6318900 0.0000000 -0.1723400 -0.0074289 -0.2396000 -0.6922400 3.6569000 -0.7239400 1.2492000 0.0224440 0.0224440 0.5768300 3.6569000 2.5441000 0.0046284 0.0046284 -0.7230500 0.0119580 -0.1924900 0.0234260 0.0234260 0.0234260 -0.7191500 -0.2360600 -0.2360600 0.6814300 -0.7330100 -0.0890140 -0.1894900 0.0000000 -0.1723400 1.0015000 0.0196430 0.0196430 -0.2396000 -0.6922400 -0.6922400 0.0061090 0.0061090 -0.7345900 -0.2165500 -0.2165500 -0.2165500 -0.2009900 0.0224440 -0.7233200 0.5768300 -0.7117600 0.0046284 0.0137720 0.0137720 -0.7230500 0.0119580 -0.1924900 -0.7419400 0.0234260 0.0234260 -0.5177400 -0.7191500 -0.2360600 -0.7253500 0.4403700 -0.0026322 0.000 0.000 -0.149 -0.726 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 0.000 0.000 -0.149 -0.726 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 8.5481418 13.3916253 9.0102047 9.6515350 1.3227935 10.4914192 -1.7336032 NA 8.9975309 9.3282580 -0.1488007 7.9350967 1.2662168 10.5940451 8.5188774 5.4361352 7.2087260 8.7520411 9.0998927 11.1079727 8.9167429 7.2492054 11.0475715 2.4361352 9.5004304 10.2809298 1.2662168 NA 10.6121714 1.9666519 12.3080421 11.7207682 7.7378868 9.3980688 8.4805309 9.2767400 3.3106019 -0.7338431 -0.7338431 7.4560365 7.9244236 7.5306545 9.7348359 2.7256539 8.5105636 7.5722735 10.5768246 5.3430276 9.9350968 -1.7336032 9.2492054 1.9666519 3.3955016 9.7042395 6.9627618 3.7256430 9.9688174 7.5790949 6.4411382 1.0735461 13.7427998 -0.1488007 11.3435283 -1.7336032 6.7419456 4.3747335 8.2899663 9.0646838 15.3741908 6.6237645 9.0606276 12.8947143 9.5556544 11.3289326 12.4387175 10.7018821 11.2817419 10.3146987 13.2407161 11.0753771 8.3010109 9.0068357 0.5881329 7.4805309 10.8994341 10.9279899 3.3536762 9.0855925 9.3838550 9.0076788 9.8726910 5.9527133 4.1241958 10.6499161 6.9907257 4.0210977 5.5971289 8.0383122 10.7687950 9.9302146 9.2571738 9.2021135 9.4229270 5.3214952 10.6769281 10.6803685 10.1457951 9.2913515 10.5165102 7.4336297 -1.7336032 8.7226382 7.8471864 5.7897736 10.7371249 7.6477549 10.7389027 9.5545012 7.1148345 14.3971041 9.9275447 9.4835637 12.5758303 9.7174230 9.5728433 0.8511993 TCGA-AQ-A04H 61 0 NA 754 breast stage iiia t2 n2a mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 80.55.0 3 1 1 3 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.769205e-06 3.815932e-07 12.4930832 5.8552447 8.2803166 10.6903172 -0.7668482 10.1576342 -0.7668482 10.0521744 12.2566007 8.9065019 10.3322118 7.2133327 9.6972281 9.8765981 8.3417172 9.1460821 11.4424939 10.3781697 6.9439998 3.4031177 10.8063666 10.6672998 14.6369206 12.2585920 9.6997793 10.9091499 5.1280088 10.2545199 -1.7666027 -0.1818039 8.0708208 10.8655065 12.5251549 5.7089266 14.9680480 13.7780064 7.9318975 7.3233052 4.9746578 4.6761376 8.4727916 8.7300465 6.0786824 13.3696634 NA 9.6303327 14.2861429 0.2331518 9.4921945 11.1628211 7.1960886 7.4426458 -0.7668482 12.5779277 7.6782079 1.9336482 9.4365408 3.6926281 5.1520576 10.3133442 10.2789525 9.5523004 9.7220371 10.4571945 10.0688485 0.2331518 11.4233262 9.8405232 6.7606694 7.0210955 NA 11.2243604 15.2740391 9.1165997 11.5018811 11.8331057 8.7260475 0.2331518 NA 4.9056205 10.6518361 9.7385083 -1.7666027 6.3153416 7.7665223 10.2011396 10.3328694 6.4279497 4.7877824 5.2666142 10.7142354 11.8796391 2.8181552 14.0939161 5.3829404 7.3803979 11.1402713 10.2144034 12.8270508 8.2303721 9.9188176 10.5885439 10.2951479 11.1114354 5.2331940 8.3829400 14.9587988 11.6095896 NA 10.5819210 9.0461723 2.0405418 1.8193412 9.7940033 10.6732834 9.5802605 9.7165048 15.1985939 10.3685815 10.3615095 8.3791249 1.5551290 16.5617275 3.4811181 11.4004542 10.4423415 10.4757715 9.5618678 8.6006076 10.7015318 -0.0058140 0.4696400 0.9826200 0.4977000 2.7364000 0.0019418 0.5482400 -0.0146940 -0.0035174 -0.0052610 0.4669000 0.5075900 0.5088000 0.0058309 0.0056919 3.6569000 0.0027745 -0.0041546 -0.0061750 -0.5228700 0.0164250 -0.5088800 -0.5365200 2.3678000 3.6569000 -0.0284910 -0.5274700 -0.5274700 1.4808000 -0.0058140 -0.5173300 0.0068044 0.4977000 0.0019418 0.0019418 -0.0024938 -0.0024938 0.0066653 -0.0033243 -0.0022168 0.0000000 0.0203430 0.0132130 -0.0073339 -0.5196900 0.4975300 0.4975300 -0.5280900 -0.5280900 0.0056919 -0.5316500 -0.0041546 -0.5541700 -0.0102320 -0.5228700 -0.5286900 -0.5088800 0.0101460 -0.5365200 -0.0269880 -0.4997500 -0.0284910 -0.5274700 -0.5410800 0.0101460 0.0033299 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 7.6740623 11.7700471 2.4811181 8.9214432 3.3206580 11.3171707 1.4031041 NA 8.1668836 6.9813858 NA 6.8371523 0.5551290 10.4837874 9.3358247 4.0911751 6.9336328 9.8716288 6.9474382 10.2534783 9.9921155 7.6190549 11.8658473 1.6926057 10.2590246 10.0688485 3.1400915 2.6255043 10.5937656 3.3624699 11.4250232 11.7053760 8.2992822 9.9179414 7.0501762 8.8770491 2.1400915 6.1873897 -1.7666027 4.3417154 8.7547933 8.4254857 9.9223172 3.4031177 2.8874083 9.1960889 9.9830623 7.2360075 10.3627978 -0.1818039 8.8607267 2.8181552 5.5730442 9.6150493 8.3249852 2.9336293 8.8797517 8.2830416 3.7877772 -1.7666027 13.1388149 0.2331518 10.8540999 NA 7.1609706 5.7330397 7.9091496 8.4535711 15.100513 5.546076 8.971285 14.968048 9.622824 10.586064 13.369663 14.467281 8.805893 10.908268 12.919748 11.890400 10.651836 8.048576 2.933629 7.827517 12.749570 11.441275 6.027610 9.038937 9.440817 9.593491 11.616118 5.310009 5.320654 12.258592 7.011270 -1.766603 3.555117 9.264384 10.706138 10.103172 7.803049 8.781051 12.627455 4.066081 9.552300 10.005095 12.057555 10.059344 11.189751 9.810622 NA 8.724685 6.350317 4.014552 10.332869 5.442645 11.435623 10.714235 7.109709 12.567396 10.090007 9.589095 11.977922 10.633539 10.702580 2.233182 TCGA-AQ-A04J 45 0 NA 819 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 4 NA NA NA 2 5 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.713281e-07 4.162835e-07 12.38815738 7.91024457 7.45009857 11.14953108 0.66612030 10.08270472 -1.65562597 9.80105791 11.58423618 8.15315425 9.22377343 7.86382635 9.60687246 10.08101494 7.11897740 9.37278694 9.57780985 11.04895850 8.47218474 3.77045908 10.96898568 11.03702366 13.10277784 11.22511294 9.41699276 11.15957356 6.79127361 10.62958375 5.85198385 1.51409700 9.52160986 12.75847908 12.54040815 6.82800570 11.78376144 11.23312370 9.70941902 7.83203047 5.03068920 7.99344623 10.22721533 10.05628736 8.61448569 7.86579079 NA 11.36047621 9.75570129 7.80362163 9.20450121 11.01152359 8.41296862 6.65252952 1.66612030 13.35871423 10.48946968 2.51412226 9.19359534 -0.65585325 6.33854386 10.11938899 10.38173717 9.41498199 10.23407446 9.76835654 10.02850050 3.34418937 11.02279036 10.34419025 4.85198385 8.24807225 5.42100444 8.62959231 15.41240171 8.47400116 11.11794765 10.85198487 9.65309800 3.25108280 0.66612030 8.10074643 9.29109655 12.25894909 -0.07081499 4.81992360 6.96257563 11.88383374 10.14225694 6.68404025 7.72356880 4.97354699 9.54508880 12.04083183 1.66612030 13.29770467 4.07211438 6.88722183 11.56502199 12.30798946 13.08744685 7.86382635 11.11629860 12.00808184 10.56226905 11.65522896 4.59211613 8.18811108 11.94363824 8.96715708 2.98804840 10.26417081 9.73543383 2.04463892 4.70525914 10.55668662 11.74666942 10.65423494 9.43694739 15.04735033 10.62293008 9.83904581 7.38584946 5.63881238 12.43579091 9.83554232 12.55120458 12.33118772 10.37140509 9.51786738 8.04636282 10.20208182 5.1868e-03 4.1352e-01 3.5322e-01 5.7420e-02 2.1234e-02 3.7808e-02 3.3601e-02 5.0444e-02 4.7570e-01 4.6309e-03 4.6309e-03 3.0751e-01 5.0772e-05 -4.0093e-01 1.4503e+00 3.1629e-02 3.1629e-02 4.0000e-01 -4.3275e-01 6.2740e-01 1.6076e-03 -1.3437e-02 -3.9837e-01 -3.9837e-01 4.5111e-01 7.8293e-03 7.8293e-03 7.8293e-03 -1.0765e-01 -3.8253e-01 5.1868e-03 -3.9782e-01 -4.0192e-01 -4.4595e-01 -8.3861e-02 -4.3492e-01 -4.3481e-01 5.0444e-02 4.7570e-01 -6.3162e-03 -2.5087e-01 -4.4163e-01 -5.8143e-02 3.9801e-01 -4.5189e-03 -4.5189e-03 -3.8141e-01 -6.6185e-01 -3.2770e-01 -1.9470e-01 -4.0959e-01 3.8276e-01 -4.3275e-01 -4.0325e-01 -8.0564e-01 -4.0297e-01 -4.3492e-01 1.0754e-02 -3.9837e-01 -3.9837e-01 -4.9576e-01 -3.6914e-01 7.8293e-03 -1.0765e-01 1.6337e-02 3.6422e-02 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.130460 12.871423 4.666120 9.481181 6.592118 11.194768 6.787133 7.603933 8.896859 10.007304 4.473475 8.963411 6.596856 10.401844 9.456630 3.701738 9.964868 10.485339 7.780902 9.516618 8.578792 8.107403 12.618714 3.736507 8.442222 10.028501 4.666120 NA 11.063365 1.803640 12.754509 11.997595 9.072111 9.989849 9.349815 9.644543 3.099076 2.988048 1.344204 4.610978 8.708325 9.349113 6.606285 7.330032 8.620384 4.944104 9.841044 6.404886 10.850994 2.431650 12.464347 3.629590 6.138606 9.045531 5.507386 8.037677 10.121034 8.988948 8.469604 6.606285 13.374469 2.044639 10.852728 -1.655626 8.553644 7.099077 7.945961 7.977185 11.138606 8.165964 8.476047 11.783761 11.349129 10.798747 7.865791 10.236354 9.455326 11.712969 13.724212 11.629159 9.291097 7.372096 2.151534 8.266031 10.621478 10.768881 5.553643 9.069548 8.685153 6.753582 9.677681 8.663862 7.688486 11.225113 9.676227 4.898779 7.347006 9.326200 13.155715 10.978548 7.973547 8.882379 10.631037 8.305640 9.414982 10.557902 11.917246 10.044630 10.527826 9.102414 -1.655626 9.681310 8.671743 9.637662 10.142257 8.000615 10.325044 9.545089 8.081218 14.339737 9.624381 10.194768 12.730187 10.350867 9.099912 1.666120 TCGA-AQ-A04L 48 0 NA 3957 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 80.55.0 6 3 4 3 3 2 2 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.78719e-07 2.503025e-07 12.2636847 2.0476780 7.5427216 11.5680887 -0.2742152 9.9712911 1.5331148 8.7577840 11.3767900 10.4122388 9.1994441 7.7341670 8.0521681 10.7532988 5.2955945 9.3623629 10.7101568 11.0044781 7.9665297 1.3106891 12.0418784 11.7822067 13.9257940 10.7519159 9.8058896 10.5185286 4.2493012 9.7030183 1.3106891 2.9736664 7.6594287 10.0661448 13.1700415 7.6972818 12.9230318 13.0899414 10.2040024 5.9545569 3.5330898 6.6857398 8.6828405 17.0151806 7.2014721 13.0163332 NA 12.5567486 12.2373675 5.8342637 9.9601905 11.0070889 8.9784039 7.0203588 -0.2742152 12.8526372 10.7615684 0.3106891 8.7972008 NA 3.0476605 10.2019782 9.9683170 9.1707531 9.9012879 10.4493993 9.5483093 NA 11.2441456 10.0295191 5.5070969 6.5712278 NA 10.8267291 14.8213826 7.3802307 10.7670553 10.6918832 11.2544366 3.1180607 1.8956516 7.9665297 8.3275091 10.7161969 0.7256975 7.4399838 6.7755866 9.4714127 10.5864374 6.4939227 5.2175913 5.4939227 9.5355065 11.7156650 2.7257412 13.2014085 5.9449076 7.5617889 11.4187896 14.0343973 12.7480194 7.6446019 9.6719136 10.7728623 9.6426106 11.2846373 4.1180523 8.4756078 12.8837168 12.4202050 -1.2743897 10.0716979 9.8045563 1.5331148 2.6335940 9.8931565 10.1619294 9.5578372 9.5144567 15.3768601 10.1897735 9.8407820 8.3928497 3.4806270 14.7461975 8.8511519 12.5603081 11.8448416 9.5290623 9.5727957 6.9351922 9.6582115 0.41462000 0.14348000 0.15876000 -0.38347000 0.44409000 2.78290000 -0.37471000 -0.82097000 0.11917000 0.03919500 0.85964000 1.07230000 0.35643000 3.65690000 0.40327000 1.40060000 1.15530000 0.01377200 -0.08837400 -0.34308000 0.06995600 0.22715000 -0.44027000 -0.44027000 0.00097064 -0.04265200 -0.41519000 -0.43322000 1.03310000 0.29024000 0.43024000 0.02505700 -0.36324000 -0.83519000 0.18192000 -0.31145000 -0.76698000 0.03199900 -0.75305000 -0.32861000 -0.38728000 -0.34779000 -1.26330000 -0.50169000 -0.45875000 0.77425000 0.26687000 0.00000000 -0.43018000 0.34209000 0.05551500 0.06995600 -0.24009000 -0.24009000 -0.76552000 -0.37932000 0.22715000 -0.00609040 -0.44027000 -0.44027000 -0.35909000 -0.46515000 -0.82301000 -0.01725400 -0.36318000 0.31225000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.965 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.375 -0.767 0.000 0.000 0.000 0.000 -0.404 0.860 -0.550 -0.550 0.000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.965 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.375 -0.767 0.000 0.000 0.000 0.000 -0.404 0.860 -0.550 -0.550 0.000 8.2687703 13.3536142 4.1180523 8.8316467 3.0476605 10.3298282 0.3106891 NA 9.2434077 9.0733597 NA 7.4839617 3.4806270 10.9327527 9.2600412 2.5330898 4.9736664 9.1902840 8.7850830 11.2493003 8.8564632 6.8237710 10.9671257 2.5330898 8.5234000 9.5483093 7.4330972 NA 9.9533543 1.7257412 14.1344330 13.0766085 8.2115676 9.2125735 7.7341670 10.1324748 6.1769490 2.8131963 NA 3.9351957 8.9254108 8.8342628 9.7660281 2.0476780 7.6876507 9.4459826 9.7945166 7.4016953 9.2716682 NA 10.7601934 1.5331148 4.9351910 9.6764328 6.1863163 -0.2742152 8.4604481 6.3256509 1.0476780 3.1180607 15.1354276 1.0476780 10.9816521 NA 10.1110616 5.3404483 7.8132014 7.4052181 13.172788 5.679933 11.396395 12.923032 10.169423 11.302459 13.016333 12.035641 9.660048 10.268287 12.426178 9.817835 8.327509 6.742547 NA 7.728553 11.756750 10.7982059 6.8498592 9.8277141 9.0408878 7.3550947 10.4679424 5.2803254 4.3981656 10.7519159 8.6667861 0.3106891 6.5837191 7.4921015 10.0672571 10.1856822 8.0226547 9.8401313 7.8342631 3.2492936 9.1707531 9.7087320 10.6121970 9.5883757 10.7411534 8.2195940 11.3890740 9.5373860 8.4791222 2.6326405 10.5864374 7.9473254 11.5489065 9.5355065 7.0655885 15.1211553 11.5665163 10.8649699 12.6289612 10.1499046 9.6929647 1.0476780 TCGA-AQ-A0Y5 70 1 172 NA breast stage iiia t2 n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 5 white not hispanic or latino 124.53.0 NA NA 1 3 NA NA 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.00121e-06 2.781139e-07 13.3584473 6.5201645 8.1947642 10.2248663 -1.5022599 9.5726072 0.8197499 10.6711615 11.3962092 6.7314168 10.4815029 6.6677219 7.1947647 9.1452551 7.3986633 8.5421907 8.7704264 10.7275168 7.9816124 5.4750752 9.5503647 9.8706617 14.4099610 10.6238558 9.4454337 10.8836591 1.9572460 10.7063359 -1.5022599 2.1982427 9.0085608 12.1491848 12.2579594 8.2308121 17.0281116 12.6834465 9.9140665 4.8376456 2.0827707 7.3743136 8.3131801 7.6826723 8.4807902 12.5145180 0.8197499 9.4743608 12.6970856 3.0827537 9.0139596 10.5132118 8.2626685 5.6167370 -0.5022599 13.0569898 8.8015774 4.2791592 8.8684840 -0.5022599 4.2526806 10.0571738 10.6513487 10.1216782 10.1626884 9.9556906 9.6475439 6.1198479 11.8901141 9.6826721 5.2922112 7.7692600 11.1095132 9.8679392 15.4637050 7.2452513 11.0376825 12.1727613 10.4556243 2.7457321 5.7362017 8.4121820 9.1032763 11.4558056 NA 6.8197244 7.3179760 9.9214380 11.6780167 7.5229361 6.7504618 5.4519924 10.8191611 11.5467944 3.7072487 13.7899386 4.4750784 7.0523855 11.7348573 12.8552800 12.7367239 8.0846367 10.7272164 11.0841674 10.1113099 10.7895430 5.4001109 8.2970781 11.9657843 11.9952743 0.4978423 10.5118172 8.9029382 3.4519891 3.0941347 9.7895429 10.0379248 10.3171775 10.5540957 15.3630709 9.5685885 9.9775770 7.9510673 4.8553469 16.1395733 7.6551436 13.2838110 11.7704265 9.6462734 8.9602991 8.5104212 10.1513360 -0.37279000 0.28977000 0.32898000 0.01586600 0.02034300 -0.36567000 0.14607000 0.30665000 0.30665000 -0.38750000 -0.38750000 0.36690000 0.63499000 -0.04346600 -0.09353500 -0.01606900 -0.03121300 0.29931000 0.29931000 0.00889190 0.21899000 -0.00926670 -0.39375000 3.65690000 1.15230000 -0.37076000 -0.37561000 -0.32251000 3.65690000 -0.37279000 -0.37279000 -0.35133000 0.01586600 -0.36567000 -0.35088000 0.14607000 0.14801000 0.30665000 0.30665000 0.30665000 0.01964300 0.01335300 -0.37707000 -0.22490000 -0.22490000 -0.22490000 -0.39778000 -0.04346600 -0.10552000 -0.09379900 -0.38662000 0.29931000 0.29931000 0.29931000 0.00889190 -0.16434000 3.54430000 -0.00041589 -0.39286000 -0.37448000 -0.38381000 -0.75926000 -0.75547000 -0.02752700 -0.18898000 0.22314000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.307 0.307 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.307 0.307 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 8.63478782 13.66521486 8.21032359 9.50412279 2.49779117 11.27134805 -1.50225991 -1.50225991 7.75989151 9.77275713 -1.50225991 8.75705759 1.95724601 10.58823997 9.37431356 1.81970905 7.83987143 9.46213762 10.20731137 10.19432965 8.86501499 7.04082888 11.59154437 0.08270259 8.33542475 9.64754387 1.08277070 0.08270259 13.54756020 0.81974992 12.49294555 12.03124813 8.35733162 11.51512713 8.17903525 8.53945585 6.63222313 5.46357995 0.49784226 2.40468518 7.90293821 9.65577524 9.96387318 4.05238981 8.33485695 7.43737590 9.89547137 6.74097072 9.06003900 NA 10.14075093 3.85535190 5.09770770 9.69023741 4.08516118 0.49784226 8.45199284 8.40468730 10.33503042 2.40468518 14.24436352 1.49779117 10.69961435 NA 8.11434568 4.52016449 8.67521609 9.37584768 12.994287 5.553078 8.879340 17.028112 10.148848 11.410499 12.514518 10.763119 8.996646 11.189976 13.264015 9.137137 9.103276 8.274230 -1.502260 8.430011 12.906525 10.8245071 7.7048111 8.5799457 9.5705992 7.6475441 9.7667480 5.1271545 6.5958289 10.6238558 6.4285344 -1.5022599 5.7551840 6.3575802 12.3675833 10.0442089 8.2188959 8.4432407 10.5350004 2.1982427 10.1216782 9.8564479 11.6259522 10.0065819 10.1092827 9.3346360 1.4977912 8.6477343 7.4945812 1.4977912 11.6780167 9.9541511 9.7637985 10.8191611 6.3986633 13.6645090 9.9876446 10.1244184 12.9939639 9.5469647 9.0667027 0.4978423 TCGA-AQ-A1H2 84 0 NA 475 breast stage iiia t2 n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 13 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.112456e-07 11.9162630 0.5900510 6.8442626 11.5085114 0.3269975 9.5900207 0.8123750 9.9712032 10.6176965 7.1497166 10.1204271 7.0329648 9.5291102 9.1278863 6.1446093 8.6160831 9.8339881 9.1668201 6.2145115 1.5900031 11.0523526 10.0408883 12.8308121 11.6586871 8.3702872 10.4614127 3.6774857 10.2630353 NA 2.7054914 6.5787048 10.5138434 13.2608983 7.6216072 13.2043472 12.7246075 8.4511076 5.6985463 3.0494565 8.7724152 8.0549071 8.8355736 7.7649465 13.6580713 3.9357992 11.2916160 14.7035324 8.5815426 10.6321020 11.2563928 9.0357253 7.8284253 -1.9948156 14.4992687 7.6289398 NA 7.5768108 -1.9948156 0.5900510 10.6243612 9.8865547 11.3906511 9.8363655 10.4956585 9.9719242 2.8124161 9.4096678 9.7351038 7.1824778 8.7261575 NA 10.9661462 13.9399009 6.3107545 11.9210310 10.9051704 7.4038020 1.3269975 -0.9948156 8.4848386 8.7847778 10.6407764 NA 4.7864186 7.7632814 10.3957647 11.2906050 4.8252361 5.1849666 5.0384801 9.7624483 11.6796920 4.3800991 13.2544310 5.8188403 7.2120722 10.1731036 11.6248198 12.7619794 9.0589842 10.4331567 9.7864180 9.5144375 10.3289575 4.6344132 8.4334185 11.9126062 9.5644353 -1.9948156 10.6878334 8.1382006 -0.4100448 2.0050406 10.0532045 9.7119859 8.7872375 9.6366900 16.5270344 10.1655600 10.0771909 8.4302744 2.4644853 16.9342936 9.2071820 12.2347033 9.8132181 9.7414602 9.5928358 7.7864180 10.2959785 -4.1585e-04 -4.1585e-04 0.0000e+00 -3.5721e-02 -3.8145e-02 5.4233e-02 5.9937e-02 -6.2286e-03 -8.7821e-01 -8.6617e-01 -8.6617e-01 8.5245e-01 9.4491e-03 9.4491e-03 8.0383e-01 6.9858e-01 1.8761e+00 -4.2409e-02 9.5883e-03 -8.6586e-01 1.3868e-03 -3.8986e-02 -6.2023e-02 -6.2023e-02 -6.2023e-02 -8.3997e-02 -8.3997e-02 -9.2345e-02 7.8003e-01 -9.2047e-01 -4.1585e-04 7.6392e-03 -3.5721e-02 3.2516e-02 2.4829e-02 5.9937e-02 5.9937e-02 -8.9626e-01 -8.3810e-01 6.9956e-02 7.4442e-01 -8.5114e-01 -8.6617e-01 -3.3802e-01 -1.2929e+00 -4.0130e-01 -4.0130e-01 9.4491e-03 9.4491e-03 -8.6696e-01 -8.7829e-01 9.5883e-03 9.5883e-03 9.5883e-03 -8.3978e-01 1.3868e-03 7.4085e-06 -8.6900e-01 -6.2023e-02 -6.2023e-02 -8.5094e-01 -8.3997e-02 -9.2345e-02 7.8003e-01 5.1359e-03 -7.4010e-02 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.029 0.838 -0.401 -0.401 -0.198 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.029 0.838 -0.401 -0.401 -0.198 7.6049712 12.2988173 8.0671046 9.8426861 2.6598332 10.5388747 0.5900510 NA 7.2904603 9.1116214 NA 5.4807918 6.5711125 10.6153911 9.2817643 4.1948829 7.1924102 9.3382136 12.0697169 11.6026453 8.6168300 7.3757458 9.4797782 3.7599441 8.7372257 9.9719242 2.3269975 NA 10.4425503 -0.9948156 12.0270793 11.3605470 6.3930764 9.8815753 11.0913604 9.8031250 4.0050586 -0.9948156 NA 2.9592508 9.0885376 8.6234437 10.7022431 -0.9948156 8.3633358 7.7193039 10.5911944 6.5787048 10.1165201 NA 11.7449443 0.8123750 5.4644886 8.8801394 6.2219003 2.0050406 9.9581635 7.1998156 5.9357945 -1.9948156 14.0152148 -0.9948156 10.4644899 NA 7.4583287 6.1291800 7.9951623 9.4202719 14.1009633 3.7329746 8.5383880 13.2043472 9.5577273 10.9821593 13.6580713 11.5454286 11.2856957 10.6998514 13.0683691 7.6160834 8.7847778 8.1484415 0.3269975 7.8316068 10.7816969 10.5567666 8.2230161 8.7790216 9.0474018 7.3822687 9.4834033 6.1135817 2.6489256 11.6586871 4.3269831 1.8124161 3.8124161 6.1286625 7.8754232 10.3292389 9.7909194 8.0162857 10.8067666 2.4644853 11.3906511 10.6941827 11.5496606 8.5644353 9.9617974 7.8489790 0.3269975 8.1150978 5.2529870 1.3269975 11.2906050 5.6271107 10.2615618 9.7624483 7.1420499 14.0040894 10.1086739 9.7831354 12.7097185 9.4696040 9.3554449 NA TCGA-AQ-A1H3 49 0 NA 989 breast stage iiic t2 n3a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 14 white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 1 4 2 3 4 3 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.224912e-07 10.6601319 8.8557742 6.8902898 11.0621086 3.2101706 10.9827598 0.9731337 10.0392204 12.1690306 8.1756049 9.9954989 8.2251207 9.1950636 9.1009414 7.5645199 9.2918354 10.4817748 9.1629557 7.5941365 3.8936923 10.1933367 9.8351042 12.4980926 10.6001438 9.8540265 10.6799972 6.2479256 10.8894202 -0.8341845 1.8662354 9.1558803 12.3381256 12.7968396 9.4569470 13.8862610 13.0735588 9.4529115 7.6252076 5.8522761 7.1964438 8.4649843 8.7526161 7.2345550 12.9358206 1.3357119 10.1416242 14.2823842 2.3357119 9.1640001 11.0594570 9.8123349 6.9372655 -0.2493078 13.5330309 7.8800218 2.7507351 9.2332105 -1.8344417 5.0605922 10.3272231 11.2705388 10.7848498 11.1268642 10.5559452 9.8060211 6.8731352 12.2393321 10.0422932 6.5751671 8.9339606 5.7126701 11.4446612 14.6807984 8.9479963 11.5824418 12.1475219 10.2094871 1.7507351 4.9471378 9.0222019 9.1257782 12.1728911 -1.8344417 5.4786580 7.3306830 10.2713574 11.1299366 8.3752298 6.3306839 4.7049328 10.7649917 11.6705952 -1.8344417 13.6038858 6.5233283 7.8696796 12.9672825 13.0303977 13.0969293 7.2074351 10.3819158 11.2963468 11.0622354 11.6153118 5.2318663 8.1141437 11.9395336 11.2239371 -1.8344417 10.3691242 9.6480800 1.9731337 2.9481897 9.8855928 10.3142529 10.0484193 9.4101401 15.1840525 10.6277672 10.5172676 8.4278710 3.1199703 15.2079165 10.6505992 13.4272835 11.9505133 10.3797917 9.6981322 8.4649843 10.8484593 -0.00097017 1.13230000 1.13230000 0.00847430 0.00847430 -0.00830050 -0.01064600 -0.00981850 -0.60584000 0.56872000 0.56872000 0.56774000 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00636680 -0.00124730 0.00277450 0.39147000 0.39147000 0.39147000 0.00055459 0.00055459 -0.00223460 0.00110930 -0.00097017 -0.00097017 0.00000000 0.00847430 0.00458000 -0.00636680 -0.01064600 -0.01064600 -0.00981850 -0.60584000 -0.00476410 0.57592000 0.57077000 0.56872000 -0.00258990 -0.00258990 -0.00258990 0.01209700 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00567570 -0.00636680 -0.00124730 0.00277450 -0.62218000 -0.47120000 0.39147000 0.00875280 -0.01023200 -0.00223460 0.00110930 0.00374650 0.01628600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 9.4337334 12.9311659 7.3431955 9.5017247 3.8589856 11.3156821 2.6893439 0.7507780 8.8078279 8.3885710 NA 8.9482749 4.6252062 10.1759547 9.2782157 3.2532329 9.8791628 9.5293634 10.1265022 10.1452014 9.8251879 7.6374516 11.2222446 2.9731337 10.2908668 9.8060211 4.7203660 NA 10.0503284 2.5580962 12.8066425 11.9393276 8.4430637 10.3966974 9.2081197 9.0089121 3.8936923 1.6252237 -0.8341845 6.8024013 8.0831485 7.8382017 9.7160421 6.2372386 7.7237954 5.3556013 10.0322824 7.4831886 9.8949720 -1.8344417 10.4471267 3.3752341 4.5056242 10.3577545 5.3955564 5.5233267 9.5260747 8.1373196 6.1881437 -1.8344417 13.6290132 0.7507780 9.8709767 NA 9.4296323 6.0112653 7.8936965 8.3117084 13.5959298 5.2101706 8.7497991 13.8862610 10.1871032 10.7551933 12.9358206 12.4235324 9.5100722 11.1517960 13.7007782 10.4944512 9.1257782 8.4430637 0.9731337 7.9223323 11.9113455 11.282283 7.831112 9.177702 9.133002 9.599883 10.228625 6.604568 8.411329 10.600144 5.704936 4.750740 8.877443 6.968518 12.612924 10.661381 9.611826 7.679504 12.507990 6.558093 10.784850 10.232874 11.732068 10.166128 11.025699 9.592041 2.558096 9.322744 7.855774 6.816828 11.129937 8.417258 10.880756 10.764992 7.258586 13.773858 9.852714 10.340702 14.002049 10.339453 9.863613 3.809631 TCGA-AQ-A54N 51 0 NA 78 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american hispanic or latino 271.28.0 NA NA 4 1 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.446192e-06 3.059253e-07 11.4068360 NA 6.0950425 11.4122740 NA 8.8392035 NA 7.8605768 10.6824073 13.2540053 10.3782233 7.3640751 8.3995535 9.2681698 6.5492179 8.5753074 9.0342688 9.8456487 7.5907375 -0.5487757 12.7766321 11.7200205 11.9893750 10.6624661 9.0787200 9.6410107 3.9106175 10.4073662 6.7821032 1.0361165 4.5386499 10.2431629 13.1858957 6.4735532 11.5162656 12.6523911 10.8348904 7.5118823 -0.5487757 9.7595252 10.6490171 10.5132322 9.2681698 5.3338280 NA 9.9440407 10.4412901 9.9218450 11.5419602 10.3759986 9.9167525 2.9106175 NA 13.5511256 8.1341809 -0.5487757 7.5010346 6.5172757 3.3580727 8.6557572 10.4313256 8.8774507 10.1782556 8.9550120 10.8327290 5.1791049 10.4162488 10.7748039 4.9430399 4.8087403 3.3580727 1.4511715 15.0813963 4.8161081 8.7062145 9.1585453 7.7226491 1.4511715 2.0361516 9.8509980 8.0361483 8.7179728 NA 2.4511979 8.7932609 11.0238864 12.8777129 3.6211141 4.7365886 5.4053832 7.9106175 11.9577416 4.8774498 12.6164072 7.2390887 7.3878243 10.3929673 14.6541899 12.1899117 9.1516257 9.7469550 10.8637560 10.1943375 10.0380259 2.4511979 10.0510989 11.4266759 9.9786631 5.2060727 10.6434789 8.9884046 NA 3.8462526 8.3700492 9.3745135 9.1671481 8.8816386 14.4397377 9.7073949 8.8795462 9.2601504 NA 10.3633269 6.3460030 12.2765424 11.4578628 10.5907375 10.7150421 7.4227300 9.9893751 1.1145000 3.3461000 2.2304000 -0.6044800 0.6166100 0.0325630 0.7222500 -0.6078600 -0.6101100 0.6616100 0.6390500 3.5485000 0.6640100 1.7974000 -0.5789100 -0.5772300 0.0607940 1.0887000 0.0481200 -0.6039000 -0.5977000 -0.5900500 -0.5570700 -0.5688300 -0.0316950 3.6569000 0.7064500 0.6764100 0.0959440 0.1084800 0.0450890 -0.1904900 -0.6044800 0.7560500 0.0269980 -0.6388700 -0.6357600 -0.6084400 -0.6101100 -0.6116200 -0.6137400 -0.0022168 0.0545180 0.6725200 0.6623500 -0.5929200 -0.5694200 1.1514000 0.6419400 -0.5845100 -0.5702100 1.0674000 0.0437230 0.0561850 -0.5920500 -0.6015800 -0.5951700 -0.5728900 -0.5802200 -0.5688300 0.1219600 -0.5942900 0.6730700 -0.5700200 0.0751280 -0.5762500 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.030 -0.611 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.475 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.030 -0.611 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.475 7.4901048 10.9470411 5.4284674 9.5333352 NA 11.6815068 1.0361165 1.7731102 9.5320036 10.5326696 8.8753525 9.4327534 7.1236114 10.1892784 9.8732509 3.4511847 3.0361516 8.0548127 8.2358209 10.1147442 8.9870835 6.1791069 10.6366810 1.8489984 9.0361486 10.8327290 1.0361165 NA 10.0520282 4.1516234 13.4391606 12.5782132 4.6211083 8.3759986 9.3338291 10.9450416 5.1791049 NA -0.5487757 NA 8.8175085 10.0575913 6.5064687 1.0361165 11.0304455 9.0267254 10.7406287 4.0361516 9.7526824 3.6211141 10.6041047 NA 2.6211024 10.0863237 7.7097993 1.7731102 5.6211112 4.8435015 5.3580762 7.9390261 15.1438016 NA 10.7319569 NA 9.6459430 7.6848061 9.1040310 6.1093982 12.309336 9.318465 8.663075 11.516266 10.095944 11.761799 5.333828 7.021042 9.777616 10.077808 14.828736 11.782943 8.036148 8.593293 3.843502 7.626112 8.503754 10.294322 6.407011 8.161992 10.626736 7.232546 8.692430 5.284077 6.680005 10.662466 11.768881 5.179105 9.321551 7.980812 12.031680 10.060365 7.302935 9.175700 NA 2.036152 8.877451 9.885814 11.497287 10.719143 10.289602 5.151627 NA 9.113730 1.773110 4.660638 12.877713 NA 10.559711 7.910618 7.528002 15.464334 10.505790 9.720313 11.412998 11.863756 9.051099 3.258534 TCGA-AQ-A54O 51 0 NA 1001 breast stage iia t2 n0 m0 2-10-2014 male 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 271.28.0 NA NA 1 2 NA NA 1 1 3 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.668684e-07 11.5829252 2.7345687 5.5758659 11.6164418 NA 9.0965070 NA 8.1580295 10.0168793 13.7090972 9.4827559 5.6887594 7.4805172 7.5419182 8.0230446 8.5632287 9.3614890 10.3263971 6.2993472 1.9569488 12.3726973 9.7251399 13.8072540 10.6479512 8.0803379 10.5071526 6.2581250 10.0602433 1.1495846 1.7345687 5.5246404 8.6233065 12.4277596 7.5071524 12.3802215 11.9832813 10.2639937 7.1211439 NA 7.0744134 8.5758652 10.0542353 7.5632283 12.2043745 NA 11.8785840 14.4696255 2.7345687 10.6241684 10.7199307 9.2449976 7.1153850 1.1495846 12.6971302 8.3443576 2.4715257 6.7789576 NA NA 7.8707001 9.6682537 10.0781190 9.9585647 8.7970590 9.9317798 NA 10.1781974 10.1045239 5.9697791 8.1325943 0.7345687 10.4004912 13.4334848 5.8494864 9.1037969 9.5547421 9.1788879 0.1496496 6.5246404 7.7003475 7.3927742 10.0130126 NA 5.4715289 8.1124968 9.1153850 9.9334174 6.1719694 5.4163871 1.9569488 9.5246400 11.4519539 4.0564882 13.4664478 8.0075818 8.2102963 11.2337446 11.9229459 11.5579303 9.5536777 8.8131588 10.0906482 9.4152157 9.3044186 2.0449186 9.3951532 10.9521169 9.8664201 NA 10.5992652 8.4602134 1.7345687 2.6090221 7.9950904 10.9681828 9.2502629 8.9761491 14.7758230 10.5268111 10.0044689 7.3094718 1.9569488 13.3144290 8.1802677 12.5948742 9.8681334 10.0466897 9.6293808 7.5842289 9.8255576 -0.097759 1.008200 1.012000 0.523800 0.575230 0.282320 0.358570 -0.809720 -0.856070 1.139500 1.139500 1.163500 0.249900 -0.393860 -0.017391 0.827840 0.355940 -0.250920 0.273630 -0.137810 -0.165230 -0.157200 -0.184330 -0.184330 0.740240 0.178840 0.396810 0.447820 1.891200 -0.189950 -0.097759 -0.180850 0.523800 0.270320 0.284380 0.151730 0.000000 -0.809720 -0.809720 -0.856070 0.528360 0.531340 -0.155280 -0.813840 -0.176130 -0.176130 -0.176130 -0.393860 -0.393860 -0.017391 -0.692150 -0.250920 0.271590 0.271590 -0.137810 -0.165230 -0.157710 0.506370 -0.184330 -0.184330 -0.149260 0.156500 0.447820 0.515420 -0.316220 -0.185460 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.270 0.270 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.163 -0.176 -0.176 0.000 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.270 0.270 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.163 -0.176 -0.176 0.000 8.1382851 11.5123664 6.5333048 9.3891992 0.7345687 10.1912597 2.4715257 NA 9.0729282 7.5842289 NA 5.3784180 3.6090339 10.1333068 9.3832202 4.3195240 8.8826158 8.4692727 8.6672698 12.8201462 9.3808219 6.8638456 8.6172063 NA 10.2163626 9.9317798 3.3195312 NA 11.1895478 2.8500393 12.2285853 12.0786740 6.6964947 8.6790310 9.0684639 10.7725675 3.0564968 0.7345687 NA 7.6374407 10.4849909 11.5013680 9.2555090 0.1496496 10.3626015 8.9793234 10.3790202 2.7345687 9.7345631 NA 11.3693742 NA 3.7345579 10.5240587 7.9810980 3.2370589 7.1885196 5.2788843 6.2048821 2.1495846 14.1073828 0.1496496 11.7893935 NA 7.4069881 4.3195240 8.5504802 8.5987493 12.4781690 6.7862252 9.7679861 12.3802215 10.2177071 11.2788836 12.2043745 11.1957014 8.9044880 9.1733548 12.2581251 8.7420578 7.3927742 8.7364405 0.1496496 7.0744134 11.3838193 10.200809 6.319526 8.399899 8.416387 7.289152 8.817776 6.850041 9.153821 10.647951 8.339425 4.764309 6.541917 7.514873 8.346817 10.344357 8.721353 10.735502 6.911152 4.237067 10.078119 10.562170 9.909489 7.877521 10.138995 4.193992 NA 9.017914 5.891067 4.673161 9.933417 7.278883 10.949287 9.524640 6.625333 13.419166 10.193995 9.152416 11.575865 10.574292 9.121144 1.956949 TCGA-AQ-A7U7 55 0 NA 304 breast stage iiia t2 n2a m0 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 4 white not hispanic or latino 360.15.0 NA NA 2 5 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.2164638 8.3260479 6.2869089 11.2586830 2.2280183 10.6542806 0.2279875 9.6867642 11.3849416 13.2536745 9.7997684 8.2298931 8.6486779 10.1091298 6.9468338 10.0310706 9.8549416 10.2355104 8.7877116 3.3434931 11.9587690 10.1152364 9.1567809 11.1088748 9.6867642 10.4763387 9.2411058 10.2359775 1.8129910 0.2279875 9.5596794 11.6860806 12.5589327 7.6874478 11.9174315 12.2007564 9.6812866 6.4948028 3.0353776 7.9829035 9.1802717 8.7023978 8.4095823 11.8291676 1.9649900 11.0417970 12.9417603 7.0310709 9.9046194 9.5566907 8.2632730 9.2373780 NA 15.5707878 13.3183268 2.2280183 9.1288826 -1.3569750 6.1428994 10.0278370 9.8814581 9.8500677 10.9313427 9.4861892 10.3870463 5.9468338 11.2012348 10.8552458 7.2832986 8.9672338 2.2280183 9.5745296 15.0313566 8.3415148 11.2651051 10.8604053 9.2014741 2.1024902 4.5737926 9.8555497 8.7877116 11.6244422 -1.3569750 4.4244115 7.3777632 10.2425013 10.6303174 6.1268696 8.3760685 5.2577650 10.2563824 11.7018907 3.6874527 13.4480918 6.0006063 7.3504124 12.4387887 12.3859943 13.0421977 8.5559427 10.8703684 10.8718721 10.7717373 11.4747564 5.3434931 8.6737204 11.1291342 11.0148300 -0.3569750 10.4865818 9.0682693 2.8909719 5.6688566 9.7684669 10.5298931 9.8537247 9.2760485 15.0339444 10.4723797 9.7966054 8.9086685 3.8525083 14.2069050 9.2392431 13.2554035 13.1082371 10.0017046 10.0299936 8.3555801 10.6293399 -0.28564000 0.53571000 0.56005000 0.01101500 0.01219800 -0.01178700 0.01024600 0.55686000 -0.28326000 0.00773970 0.00773970 0.00773970 0.28520000 -0.28616000 -0.00100860 -0.00100860 -0.00100860 0.00120960 0.00820070 -0.28556000 0.02563200 -0.00792460 -0.01825400 -0.01825400 -0.01825400 -0.03003200 -0.03003200 -0.03003200 0.28782000 -0.01797900 -0.28730000 0.00718310 0.01101500 -0.01178700 -0.01178700 0.01024600 0.09285500 0.56005000 -0.28326000 -0.29063000 0.00481940 0.00481940 0.00143410 -0.00183980 -0.00183980 -0.00183980 -0.00183980 -0.28159000 -0.29441000 -0.01316500 -0.00100860 0.00120960 0.00093216 0.00093216 -0.28338000 -0.26615000 -0.00792460 -0.30502000 -0.01825400 -0.01825400 0.00565330 -0.03003200 -0.03003200 0.28782000 -0.27658000 -0.31100000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.8214070 13.4784623 7.8957189 10.9613137 6.5559434 11.4769317 7.0651177 -1.3569750 8.8341126 8.2632730 -0.3569750 7.8451770 3.7305204 9.6619489 10.0481948 2.7305095 10.4967527 9.2429661 10.0865150 8.8933519 9.8064641 8.5619164 11.4289145 5.0353688 7.9215030 10.3870463 3.7723396 -1.3569750 11.2837502 3.9649808 12.6166610 12.0562846 8.6088377 9.6066719 11.5585593 9.0891027 4.0693155 2.1024902 -0.3569750 5.7723370 8.9027966 9.9376741 9.5325574 5.3434931 8.4404556 6.4568341 10.0963239 5.7723370 9.3650070 NA 11.6518321 5.6203342 6.1349068 8.9627029 6.8659930 9.4219518 10.7331658 9.6867642 9.9226639 0.6430250 13.1635493 1.2279875 10.4415252 0.2279875 8.7774796 6.6317387 7.5226365 8.5025880 12.149574 5.370973 8.252232 11.917431 10.264189 10.357299 11.829168 11.815481 9.063972 10.957920 13.556551 10.968640 8.787712 8.439093 1.227987 7.350412 11.269219 11.3341425 6.2280163 8.3811458 8.7010451 7.9168492 10.4737706 9.9474046 8.4979217 11.1088748 8.0202638 1.2279875 5.1349068 8.2318053 11.0651181 11.4574355 7.2869098 9.3278019 11.5831834 10.4350301 9.8500677 10.4873669 10.5195703 11.2923096 10.6335119 8.9168489 0.9649531 10.1894945 7.9155896 10.1443930 10.6303174 7.4079246 11.2362950 10.2563824 7.4916760 13.1215702 9.4608365 10.2429661 12.9318473 11.2207182 9.9962002 4.8525083 TCGA-AR-A0TP 43 0 NA 3386 breast stage iia t2 n0 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.2275558 -0.4657391 6.0100212 11.1799451 NA 10.2673020 NA 9.3632164 11.6838750 6.9049741 10.0029108 8.4650239 10.0301417 10.7020184 8.7117062 8.4531500 9.1220641 10.7290436 10.2216624 6.7534548 10.5483071 12.0700481 13.4051330 10.5963328 10.7705999 10.7247287 1.5343107 10.5824329 8.0946193 0.5342609 6.7437398 13.1081705 13.1210092 6.3860349 11.5002513 13.2967206 9.3156464 6.4108041 1.5343107 8.5732056 8.4590992 11.0248869 6.9223037 6.8196886 1.1192234 11.5820922 3.3416442 9.8668828 9.3284914 10.7600966 9.1022427 5.1041437 1.1192234 13.2215415 7.8539589 1.8562288 7.9605517 NA 3.4411780 9.3703369 9.6480289 8.4884829 10.2958379 9.6616361 10.2111253 -0.4657391 12.2968764 10.5000709 3.8918372 7.1853383 -1.4655399 8.0850337 16.3478675 7.7411548 10.4203643 9.6070893 10.0831086 1.7042080 1.8562288 9.3703369 9.4701883 10.8522645 0.5342609 4.7631035 6.8918384 11.2465987 10.8374967 1.8562288 4.3156459 4.9937196 8.1471551 11.8647835 3.7042080 12.9361662 3.1781410 6.6217501 12.0501097 12.6180984 12.7927791 9.3400306 11.2866673 11.3973114 11.5460538 12.1267437 4.9436776 7.5922784 12.2919892 11.6085954 0.8562288 10.0430719 10.1794948 1.1192234 3.8583789 10.5827736 10.7576851 10.3303262 9.0170946 14.9471542 10.5997028 10.2732234 8.0715053 7.5759461 12.7885034 9.1499163 12.9013601 11.9924369 9.9793016 10.2528195 7.7774605 11.0354745 -0.0952520 1.3919000 1.5176000 -0.9055500 0.7394800 -0.8958800 0.8705000 0.9081500 -0.9424000 -0.9645200 -0.9645200 1.8592000 0.0084743 0.0084743 -0.9351900 0.0127950 0.0127950 -0.0018014 0.8390300 0.8972800 -0.8949400 1.6268000 -0.9069200 -0.9166500 -0.2822700 0.7400500 0.0359070 -0.0522610 -0.0150540 -0.0231550 -1.2929000 -1.0537000 -0.9055500 -0.9873800 -0.1296900 -0.9186000 -0.9149200 0.9081500 0.0126550 -0.9820000 -0.0109220 1.5468000 -0.9645200 0.1345000 0.1300700 -0.8888100 -1.0008000 0.0084743 0.0084743 -0.9841400 0.0352420 -0.0018014 -0.0070576 -0.0183530 -0.9076800 -0.8747100 -0.0951200 0.0237060 -0.9069200 -0.9015300 -0.9206200 -0.9429800 -0.0522610 0.7543300 0.0800240 -0.1563100 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.932 1.074 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.932 1.074 0.000 0.000 0.000 6.0656671 13.8697817 2.9937106 10.8929379 NA 12.9150183 NA 6.9308911 8.6712778 8.8685599 7.0965286 9.4854184 9.3400306 10.4449295 9.3197392 4.0888794 6.2416457 11.7221027 9.1969552 9.1924982 8.4781495 8.0018923 11.7394690 NA 8.7437401 10.2111253 3.7042080 NA 9.3789925 2.2347159 13.4987629 12.9883932 7.6057491 9.8133169 6.3156459 9.2774381 5.3797769 3.0578488 -0.4657391 NA 7.8652037 9.8369257 6.2553855 4.7437411 10.7577062 7.4260701 9.1781429 8.3480677 11.0074850 3.6217471 13.3501703 1.9937106 5.7042108 10.0105316 6.5794457 NA 8.4366620 6.4351535 -0.4657391 7.1599954 13.8888460 -0.4657391 11.1102986 NA 9.1690977 8.3287027 8.1599954 7.8607164 9.412384 7.619095 7.441177 11.500251 10.008500 11.529701 6.819689 13.354865 9.293343 11.081422 12.731964 10.791085 9.470188 8.416930 4.441178 7.716681 10.880246 10.239919 6.567710 8.470925 8.989614 4.315646 9.774374 3.341644 4.148999 10.596333 10.456871 2.993711 9.211125 9.396645 13.907764 9.743740 7.828908 8.305776 9.443430 1.704208 8.488483 9.467240 11.568914 10.139303 10.247673 9.615770 NA 9.248833 8.613918 2.704208 10.837497 8.192498 9.243629 8.147155 8.024135 14.237217 10.219473 10.921227 11.427209 10.050972 8.423030 1.119223 TCGA-AR-A0TQ 27 0 NA 1500 breast stage iiia t3 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 72.63.0 3 1 1 3 1 5 1 3 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 13.0649053 8.1653221 5.7452320 12.0263826 -1.8693327 10.2239409 -1.8693327 9.8575929 12.0802589 7.8064807 10.0400414 7.7580573 8.7192379 9.5672349 6.6462232 8.3240486 10.6090402 10.2960585 7.1830914 6.4924669 10.3566344 9.7566887 14.5881447 11.4682846 9.8157102 11.0684489 7.1020670 9.9865598 -0.8695962 3.0847276 8.3867321 12.0040636 12.4128155 5.9443056 16.6665201 12.5873269 9.0101065 5.7378544 2.9378717 5.4968458 8.4603195 9.0001172 6.0192660 12.6730716 0.9378717 9.9657843 14.6793302 2.7154761 10.1176701 11.0721212 7.3104328 8.6393085 3.4159209 14.3694992 10.1359584 2.3784561 6.8787168 0.4524900 4.8719915 9.9131122 10.3914430 9.8745162 10.1045794 9.6248790 9.8799739 1.4524373 11.3525635 10.6961015 6.0070407 7.2259208 2.3784561 10.8439099 15.3793497 8.6364539 11.8999480 11.4372971 7.8309632 0.9378717 3.4524505 6.5858504 8.9507023 10.5614986 NA 3.4159209 6.6965767 10.1170766 10.7896273 5.0253389 6.5567881 5.3973101 10.6879871 11.7451182 4.5567911 13.9362672 5.4159243 6.6501600 11.3298890 11.1539312 12.8669253 7.4251437 10.3029508 10.7084242 10.6162822 11.1560090 4.8854133 9.0283689 11.3306557 9.5567881 0.1305356 9.4990299 9.1563552 1.3004752 3.3496908 9.5960898 11.3997962 10.2594844 8.8601440 15.1803825 10.9995388 10.3411947 7.8481998 1.5899552 15.6847030 5.2285571 12.0107765 11.7357714 10.1448926 9.1417506 7.5441515 9.9456184 -0.23202000 0.18980000 -0.25575000 0.00444740 0.01600600 0.01712400 -0.00097017 -0.15464000 -0.15464000 -0.04563500 -0.04563500 0.45564000 -0.00747200 -0.00747200 -0.01587900 -0.05068600 -0.01188700 0.22283000 0.22283000 -0.00448500 1.23010000 -0.01821600 0.17724000 3.65690000 3.65690000 -0.29154000 0.17211000 0.14480000 3.65690000 -0.26979000 -0.23202000 0.00861350 0.00444740 0.01712400 -0.00487380 -0.00097017 -0.00097017 -0.15464000 -0.15464000 -0.15464000 0.00000000 0.00000000 -0.04563500 -0.50826000 -0.46600000 0.01810300 0.01810300 -0.00747200 -0.00747200 -0.01587900 -0.01188700 0.22283000 0.22283000 0.22283000 0.00138680 -0.02110300 -0.01821600 -0.02996600 0.17724000 -0.29733000 -0.00940460 -0.29154000 0.17211000 0.20274000 -0.01958900 -0.04955900 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 8.9634134 13.1323274 7.3949659 9.3802294 5.0007662 11.7208765 5.1528892 0.7154541 8.8091234 6.5899552 -1.8693327 7.2422586 2.2179751 10.7060626 9.2285554 3.6851104 9.6178610 9.6937197 12.3105102 11.5408422 9.8217652 8.3399769 10.6027065 2.8309651 8.5796719 9.8799739 4.9249407 -1.8693327 11.1282321 1.9378717 12.0128799 12.3166376 7.0671611 9.8669253 10.3243567 10.1912193 6.7598802 2.5228342 1.1305356 4.3784492 8.7173632 9.8417601 10.1113770 4.4703742 6.5655682 7.4725982 10.9538906 6.1305232 10.3943794 -0.2845459 9.7364659 4.7887327 6.2179868 9.1414080 6.0411970 6.3104328 8.8318298 9.1563552 9.5351328 0.4524900 13.2029491 2.5228342 10.8609935 NA 8.9427007 4.9378764 7.5609763 8.4274394 13.505152 6.320347 8.037414 16.666520 10.296373 9.753948 12.673072 12.849805 8.907581 11.035534 12.701624 11.516521 8.950702 7.626379 3.130519 9.665313 12.553245 11.0710205 6.9216862 8.4580760 9.0590418 9.4199659 10.5065212 7.5837943 9.6817509 11.4682846 4.8447673 -1.8693327 4.9378764 9.1925088 11.8798691 10.4891746 9.0818080 9.4620002 9.8563156 7.2285551 9.8745162 9.7730264 11.2031584 9.6278762 10.6417818 9.4957521 -0.2845459 9.9261815 7.6096567 7.7851595 10.7896273 5.5899552 10.5025722 10.6879871 7.6104454 12.8273822 10.2126724 10.2862903 11.5986383 10.3653408 9.5729486 1.8309449 TCGA-AR-A0TR 68 1 160 NA breast stage iib t2 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 72.63.0 5 5 3 2 2 1 1 4 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8841984 5.0898879 7.8584983 11.8271074 -1.8640712 11.1220664 NA 10.2320767 12.4610667 10.4021847 10.6272937 9.0106724 10.2867076 6.4303120 7.9811808 9.4893892 11.6006196 10.1385060 5.8081173 1.5951217 11.2116714 7.5172340 14.7587723 10.8016931 10.0982256 11.4460198 5.1243778 11.0314461 -0.2792838 1.1356662 6.3005978 12.0966884 12.9221092 4.7504028 13.1649351 14.1884501 7.5889619 6.5869028 4.4755389 5.3645094 8.1172582 9.5139859 4.1580623 13.9275915 2.3836075 10.3096804 14.9137040 5.4932438 8.8353241 11.1504089 4.7650467 7.8955789 0.1356662 13.6115656 7.9005293 NA 7.9526749 NA 3.0425743 10.2889264 9.4089037 10.4254217 12.0152743 10.1549343 8.8274345 0.9430586 12.2307583 10.6533604 7.4234034 8.7983594 0.1356662 12.5897332 13.2844456 10.3201604 11.2195027 11.5637894 6.8972428 1.1356662 6.0485806 7.9685810 9.1635971 13.4339684 NA -0.8643338 7.4164615 9.7559109 10.5052884 1.4575943 4.7055467 3.0425743 9.9256322 12.1735811 1.3056204 13.3025602 6.8081160 8.1497116 10.3509206 8.4257098 13.1454759 6.8567903 10.7464852 10.7376939 11.2994869 11.8921431 5.7867427 8.4766539 11.9540735 11.2954047 NA 9.6250372 9.4153015 0.7206287 4.4639167 9.5020133 9.6845130 9.8473579 9.2304286 14.9130234 10.9827484 10.0263353 9.9268538 1.4575943 14.9770342 10.2383229 11.7034095 10.3112406 11.1217108 9.4018920 8.9701620 11.3502378 0.0000000 0.8792100 0.9056100 0.0051897 0.0020965 -0.4348100 0.5147900 0.4458500 -0.4428000 0.0004301 0.0004301 0.0004301 -0.4473500 -0.4467000 -0.0060369 -0.0060369 -0.0060369 -0.9025600 0.4345200 -0.4360000 0.4506100 -0.4485300 -0.9228400 -0.0041010 -0.0041010 -0.0126600 -0.0126600 -0.0126600 -0.0156920 0.0000000 0.0000000 -0.0703510 0.0020965 -0.9553400 -0.4348100 0.4433100 0.4433100 0.4458500 -0.4428000 -1.2929000 0.4531600 0.4428000 0.0309270 -0.9036300 -0.4338300 0.4257600 0.4248300 -0.4467000 -0.4442200 -0.0060369 -0.0060369 -0.9025600 0.4345200 0.4345200 -0.4360000 -0.4611600 -0.4453000 0.4550300 -0.9228400 -0.0041010 0.0227790 -0.0126600 -0.0126600 0.0081192 0.0226390 -1.0209000 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 -0.008 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 -0.008 8.3487954 10.6405100 0.4576468 9.0045135 5.6979322 11.4304553 4.2442173 -1.8640712 9.2500840 2.9936744 -0.8643338 4.9256814 NA 9.8120889 9.3983732 0.7206287 8.7641365 8.6748497 11.5469372 9.9394185 9.0681643 9.9890006 7.6053328 2.5951217 10.8771580 8.8274345 2.1356990 0.4576468 9.9878303 2.5279961 12.7539044 11.9471661 4.7206561 9.8593520 6.7168922 9.4337536 2.4576206 -0.2792838 0.4576468 5.0898879 9.2494333 9.2258034 10.5445515 2.3836075 6.7897905 6.2337232 10.4741488 5.5450819 9.6093967 -0.2792838 13.2319944 1.4575943 4.1356908 10.0296599 6.4268149 5.8771577 8.9088303 7.0605036 6.7939024 -1.8640712 14.2359632 -1.8640712 10.9952258 -0.2792838 8.7026963 3.9685792 8.0395727 8.3081187 12.7552467 3.7795434 8.3705083 13.1649351 10.2264651 11.1074142 13.9275915 12.8512241 9.2585189 10.2248104 12.3991069 6.6395173 9.1635971 8.8567903 -0.2792838 7.3031095 12.1310165 11.1337525 7.9235937 8.9819648 9.2422540 7.7813492 11.5767275 6.5280086 8.9071806 10.8016931 5.6670718 -0.2792838 4.3451409 7.4097193 6.4976347 10.8561490 8.9307403 8.5215533 13.3162607 6.5619554 10.4254217 10.5835491 6.0485806 9.3156002 11.3188611 10.1154734 -1.8640712 9.9453184 4.6902774 6.7281477 10.5052884 1.3056204 10.8936123 9.9256322 8.2071535 14.3475603 10.5501120 10.3924894 12.3048331 10.1314582 10.8464975 1.9430586 TCGA-AR-A0TS 46 0 NA 2275 breast stage iib t2 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 85.58.0 4 4 2 NA 1 3 2 5 1 6 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 8.343418e-07 1.668684e-07 12.3904442 7.9148210 7.3977285 10.9223863 NA 10.8249702 0.3893465 10.0792980 11.9178762 9.1391694 9.5205138 8.4513459 9.4794123 10.4840374 7.9854896 9.1599639 9.0122670 10.4268469 10.1286587 5.9667281 10.1210433 11.4377868 14.5592054 10.6922244 10.0901730 10.9032742 7.6443286 10.9982385 4.6560844 2.5592226 10.0832224 12.0179733 12.6922244 7.6060461 13.0890350 11.7849680 9.4574063 4.8970952 0.7112306 6.5288510 9.3369370 11.9929263 6.4061080 4.0331587 NA 11.6773008 7.7157294 7.3021893 9.4824930 11.1849338 8.3066719 8.0722945 3.8487281 13.6820324 9.3977285 4.4553864 9.4289045 0.3893465 5.1307662 9.5333208 10.2433891 9.3288791 10.7949733 10.0254714 10.6452137 4.6747036 11.6364857 10.6133016 4.1172213 8.0528582 1.1966700 7.5987530 15.7543835 9.0716627 11.7479511 11.3747861 10.0541916 3.7468502 2.4767705 9.6342584 10.3387619 10.7864398 -1.6108738 2.9128606 6.4172061 10.8786462 10.7291500 4.4767640 8.0966593 6.1307662 9.4377868 11.8951115 -1.6108738 13.4757679 4.1172213 6.5642257 11.0256980 13.8802761 12.7353288 8.5803592 11.8484754 11.0504099 10.6895123 11.7928446 5.3081643 7.6654240 12.9984209 8.4061080 2.4767705 10.1541715 9.6294951 3.7816220 3.9775639 10.7305408 9.5642255 10.2213987 9.9443683 14.6333106 10.5043436 10.3185584 6.8446267 6.7157300 11.9329360 7.2565786 12.7405153 11.6976390 10.1374928 10.0749248 8.1290805 10.5012181 0.310470 0.317850 0.321390 -0.178550 0.334620 0.189930 -0.066537 0.121500 0.108020 0.151550 0.151550 0.746110 0.345810 -0.143630 0.059347 -0.114490 -0.060038 0.216350 -0.117060 -0.087464 -0.041313 0.384340 0.026636 0.026636 0.026636 -0.101880 0.044130 0.044130 0.057751 -0.084280 0.310470 -0.120190 -0.178550 -0.126560 0.179940 -0.066537 -0.066537 0.121500 0.108020 -0.073128 0.058491 -0.026562 -0.303350 -0.122530 -0.122530 -0.122530 -0.122530 -0.143630 -0.143630 0.059347 0.292760 0.070619 -0.284190 0.039884 -0.087464 -0.069885 -0.153760 0.276610 0.026636 0.026636 0.011939 -0.101880 0.044130 -0.141990 -0.348490 -0.131100 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 11.1940360 12.6108115 1.3892915 9.4794123 8.7994332 11.8655399 8.1103993 7.8322432 8.2642812 7.4607622 6.3836542 9.3496278 6.7246898 9.7285932 8.7402392 5.5491701 10.0897397 11.0584065 6.0687804 8.4807353 9.2055076 7.8731155 12.2972233 4.7112306 8.6770124 10.6452137 3.4336939 NA 11.2050835 3.1966543 12.3112338 12.1772025 9.2604350 9.6108870 9.3608436 8.8343149 5.5889724 2.1966700 -1.6108738 0.7112306 8.2810839 8.7224554 8.7213364 5.7468529 10.0119421 6.3200369 9.7853694 6.4172061 10.0479578 2.0897354 11.9933898 4.4116703 4.2961931 8.5684874 5.7578073 8.9197063 9.9957051 9.4012260 9.5498016 6.1374933 13.0790796 3.6746979 10.4804047 4.6372277 9.6890804 5.3081643 8.6665872 7.9686161 9.8579392 7.8322432 8.4925879 13.0890350 10.1576539 10.9697941 4.0331587 12.0122669 9.1558289 11.7346844 13.4026226 10.0340575 10.3387619 7.5815930 -0.6106535 7.7269218 11.2696488 10.792845 4.865033 9.325938 9.556091 7.183716 10.159580 9.299193 8.190200 10.692224 7.674702 2.296193 6.936194 9.907938 13.869333 11.213463 7.428219 8.315596 10.489962 9.542219 9.328879 10.008144 12.281843 12.213762 10.851291 10.180463 6.492587 10.415713 7.807005 10.024565 10.729150 5.943889 10.270812 9.437787 7.940047 13.951125 9.665424 10.546647 12.744582 11.386656 9.809787 3.476758 TCGA-AR-A0TT 53 0 NA 2636 breast stage iiia t2 n2 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 5 black or african american NA 72.63.0 7 2 4 5 1 4 1 3 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.6671289 6.7449603 11.1733918 11.2728086 -1.2940663 10.6155591 1.2910141 9.7968151 12.0233123 8.8659123 9.7592882 7.7935038 7.9657843 9.8249821 4.4064822 9.5978248 10.2123486 10.6323370 7.8859501 4.6833203 10.7660614 10.0978216 13.3285505 10.1063868 9.1281057 10.9581151 8.7518008 10.2663738 NA 0.2910141 9.7483844 11.1424923 12.7434164 8.1154318 11.9707768 12.5592531 9.1122461 3.7504350 0.7060221 5.1323054 9.3986565 4.8759668 8.0369577 12.5343759 2.4064822 10.6996870 14.0654818 0.7060221 9.4952894 10.4721558 8.6833210 5.7284076 1.0280033 14.4208036 11.3228196 1.8759766 8.1217827 -1.2940663 7.4808282 10.9459379 10.1143708 9.5206234 10.8840833 10.2538995 9.8952478 2.7060442 11.2780306 10.5787159 5.7504350 8.3731527 8.6144338 11.0425476 14.7818962 7.9345230 11.3251147 12.0719533 9.2286225 2.1654618 4.6602384 8.8633881 9.3012984 11.1562213 0.7060221 5.1978929 7.5947844 10.4775305 10.3557463 9.1396266 8.1998966 6.3642520 10.7788435 11.7667369 3.7935006 13.2503414 6.1323054 8.2529355 11.0764560 11.6609643 12.9100007 7.5230248 9.9093890 10.7113146 10.0081202 11.4341741 4.7060387 8.6933050 12.0651042 11.0049628 -1.2940663 10.9584108 9.2128443 2.2910141 3.2308639 9.6478223 11.4769114 10.5085574 8.7367080 14.9774493 10.4267128 10.0442203 8.4675921 4.1654698 14.7177706 5.6947270 12.3830999 11.3749260 9.6241588 9.7221528 8.1938811 10.5077979 -0.1287500 0.6122600 -0.0918160 -0.1073600 -0.1073600 0.0094893 -0.0320410 -0.0140900 3.6569000 -0.2891700 -0.3454700 0.3450200 0.1622000 1.1349000 0.2498100 0.0881130 0.8920700 -0.0226060 0.7000800 0.4358100 -0.2476700 3.6569000 -0.2773900 -0.1642800 2.9496000 -0.2956800 0.0225850 0.5829100 0.3976100 -0.1287500 -0.1287500 0.0027745 -0.1073600 0.0094893 -0.6687300 -0.2203400 -0.2203400 -0.0140900 -0.0819770 0.2362800 0.3069700 -0.0308210 -0.5718000 0.0928950 0.0928950 0.0928950 -0.0162920 -0.1570700 0.8161000 -0.3306300 -0.3270400 -0.0226060 -0.0150540 -0.0150540 0.4070900 -0.2355700 -0.2974500 0.1755800 -0.2773900 -0.1642800 -0.2863200 -0.2973300 -0.0080244 0.3976100 -0.6760900 -0.6480000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 3.657 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 3.657 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 10.6950806 12.7470156 5.1817744 10.1164924 7.1654728 12.0565659 4.8145658 NA 8.4082138 6.9681357 NA 8.2870908 3.5133897 10.5740919 9.1047848 2.0279679 10.6389939 9.7538465 8.5702272 9.5825579 9.1900785 8.3766971 10.7130683 4.4609260 6.3133710 9.8952478 2.4064822 NA 11.1109164 2.4064822 12.1742832 12.2189049 7.1938811 10.0613921 9.3615717 9.4988313 4.5133960 2.8759569 -1.2940663 0.2910141 8.3977846 9.6412061 9.4525553 3.2909994 8.3268474 6.2374222 10.0843359 6.0723631 9.5748635 NA 9.6099228 4.5389292 3.5640245 9.2007567 4.9315838 9.4550724 10.1364935 10.3133714 11.0542159 -0.2938894 13.4966441 2.6129422 10.9792538 NA 8.3942912 3.9154922 7.5198226 8.3462859 11.079730 6.454233 8.597825 11.970777 10.595925 9.794167 12.534376 14.899239 10.148466 10.865282 13.177018 11.212844 9.301298 7.793504 1.706022 8.926419 10.840788 11.1554476 6.1898562 8.3960392 9.0403144 8.3244263 11.2400909 9.0657907 9.7263265 10.1063868 5.7060415 -0.2938894 5.6008585 9.0748640 10.5667400 11.1687989 8.0458912 8.7394640 9.6338190 10.1582822 9.5206234 10.3244265 12.1372774 9.9663725 10.7667369 8.9492151 7.6602370 9.5750719 7.3207509 10.3372180 10.3557463 7.4064805 11.2728086 10.7788435 7.5613147 13.3031042 10.3092037 10.0586362 12.3450425 11.0375179 10.1344012 5.0983564 TCGA-AR-A0TU 35 0 NA 360 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 NA NA 74.60.0 4 4 NA 1 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699824e-06 5.550446e-07 11.9500046 1.1317870 6.1823904 10.4623616 NA 9.9201335 1.3244074 8.5947053 12.0383333 7.0352159 9.6912784 7.7858892 7.5043193 9.2469942 8.4381519 7.2873061 8.8509091 10.8840259 7.8322046 9.2469942 9.9131244 10.1893698 12.1859814 9.7652790 9.7632017 10.3345883 6.7797364 9.8341849 0.6463470 1.7838338 7.1572994 10.0287458 11.8506645 7.1792781 10.5862110 11.3790142 9.3605835 9.1565086 5.6190315 7.7422623 8.3701695 8.0437989 6.2372998 6.3356369 NA 10.2782426 11.3380815 5.2786056 9.5876791 10.4082216 9.7406795 4.1573025 0.9093507 14.9809825 11.3443480 0.6463470 7.8961622 NA 3.0248515 8.4092182 10.8980571 9.3474710 9.1893697 9.9065518 9.4620415 5.9897453 10.6550467 9.4974623 3.4943388 6.3958717 NA 10.0274482 13.4924551 7.9194992 10.4065589 9.0809662 11.4194772 NA NA 8.1493686 8.3215895 11.8006498 NA 3.5723319 7.6687056 10.7404157 11.2818747 3.4536888 6.6463384 4.3016901 7.3300340 12.5577299 4.5338623 12.8105535 3.3688102 6.6098126 10.1777194 9.8813948 11.9518297 4.3904957 9.3871307 12.0337091 10.7478226 10.5237755 3.4943388 8.4368494 12.0253914 9.3009739 -0.6755350 10.1870472 10.0144079 0.6463470 2.7256321 8.2507058 12.0414436 9.9219969 8.7971005 14.8017887 11.0989910 9.7848658 6.6598004 -0.6755350 10.9409587 9.0178969 12.7681952 11.8052001 10.4671551 9.7005353 7.6863534 9.5476272 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.87180546 12.27460121 0.64634702 8.90561054 2.77660937 11.76047068 1.32440740 -0.09064930 9.99373790 6.44335137 9.56281462 7.53142435 NA 10.77459008 9.74226244 2.84797687 6.14458891 10.31628594 8.07929757 10.64379974 8.45010765 6.16361345 9.59820551 0.09841956 9.73114641 9.46204148 1.78383378 NA 9.79405173 3.90936990 13.63963020 12.49800892 5.59119768 9.77665115 11.48144093 10.20284401 3.27860928 1.78383378 -1.67576544 NA 9.26398908 8.45240435 5.40122428 8.43945359 6.97775616 7.84207938 10.63473864 4.89426483 10.11882573 2.23130952 12.49511736 0.64634702 3.53386232 10.77285658 7.16908419 3.23129415 7.41187278 8.19939114 5.23130183 2.57233188 13.89488821 0.90935070 10.78614512 -1.67576544 10.45658821 2.49433880 8.56877356 8.50182923 10.203610 8.530203 9.327225 10.586211 9.699992 12.357058 6.335637 7.163613 9.851398 11.249964 12.490102 12.636371 8.321589 9.036077 5.182390 8.290194 10.374258 10.917801 4.514236 9.793034 9.943254 5.194773 9.902202 5.543579 4.494332 9.765279 10.918734 4.024852 9.432934 10.452246 13.398802 10.927109 8.427016 8.278606 5.301690 5.664261 9.347471 10.381725 11.537514 10.104950 10.306690 7.789976 NA 9.050756 6.586505 4.879000 11.281875 4.157302 10.986411 7.330034 8.070269 15.070465 10.695642 10.166367 13.289518 11.665234 8.891415 1.646347 TCGA-AR-A0TV 66 0 NA 905 breast stage iia t2 n0 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 NA NA 72.63.0 3 1 4 3 1 4 1 1 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.02632293 -0.51477929 8.32757645 11.70787028 -0.51477929 10.24344952 0.80719003 9.17609733 11.64683062 7.03981505 10.07394097 6.68489867 8.75084129 8.51589337 2.39212505 8.84497592 10.35713156 9.47106834 6.37397005 3.73315908 10.06642695 10.76715637 12.66668919 9.17085118 9.07768336 10.35751638 6.68489867 10.70257825 NA -1.51457317 7.79810950 9.02632286 12.77869795 5.83395519 11.80715440 12.50368732 7.89885408 6.15765212 1.48522071 9.79867624 8.37092275 3.07018321 4.09993476 12.36500100 2.94465233 9.38684737 13.51239799 3.43942367 9.97083425 11.50551182 3.69467965 3.77062822 1.48522071 14.95394166 11.65983993 1.94467107 7.78900733 NA 3.91149026 9.99648479 9.69589762 11.01245896 9.05792649 9.85209484 10.46536590 4.78900929 10.14254478 9.83892451 7.22669348 7.64509782 3.57268355 11.48487404 15.35204641 5.63355036 12.01172554 10.06689765 7.68979745 -0.51477929 NA 7.99103765 9.19431019 10.03741503 0.07025192 4.21314506 7.28288826 10.49085088 10.27190429 3.43942367 6.55668844 5.14343832 9.60481599 11.68397829 2.57269568 13.29489397 6.93643771 8.16646490 9.02438507 11.07112773 12.49750165 8.33853584 10.42884001 10.19947187 9.73799816 11.67288769 4.21314506 8.40259855 12.05472593 11.90571293 3.34320882 10.51174979 8.86135184 0.48522071 2.84136935 10.74526372 10.42810731 9.52756966 9.73315382 15.04003996 10.29056713 9.57732270 7.22331828 2.65514571 16.93484668 4.94465702 10.70771933 10.59961935 10.38760143 9.22921922 8.03212068 9.79660003 0.0176840 -0.0426520 0.0120970 0.0206230 0.0206230 0.0141900 1.0561000 0.3215700 0.3215700 -0.7618400 -0.7618400 0.7719500 0.0091705 -0.3483600 -0.7411600 2.0880000 3.6569000 0.6492800 0.0154470 -0.7579000 1.3111000 -0.3555600 -0.0268510 -0.0268510 -0.0332980 -0.0571160 -0.0571160 -0.0734330 0.6931600 -0.0018233 0.0176840 -0.3389400 0.0206230 0.0141900 0.0183830 -0.7516700 -0.7480300 0.3624800 0.3215700 0.3215700 -0.7674000 0.0062481 -0.7618400 -0.7361700 -0.7361700 -0.0418380 -0.0757450 -0.3550500 -0.3451500 -0.7411600 -0.7403700 0.0154470 0.0154470 0.0154470 -0.7434200 -0.7496800 -0.3555600 -0.7666300 -0.0268510 -0.0268510 0.0225850 -0.0819570 -0.0734330 -0.0388500 -0.7396700 0.6989500 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.654 0.654 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.202 -0.734 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.654 0.654 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.202 -0.734 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 8.57930387 11.36653150 1.29260508 9.19775336 5.24011203 10.52105633 2.07018321 NA 7.47957981 5.40408906 NA 6.63695372 0.48522071 10.61128546 9.39811561 4.78900929 8.55668882 8.22500687 6.66015139 9.39211689 9.01169633 7.77062822 9.72601767 3.29257564 9.93746754 10.46536590 0.48522071 1.29260508 10.79810926 0.48522071 12.24999424 12.87539526 6.92401791 10.50203457 10.87378183 9.81165582 2.94465233 2.87754795 0.07025192 9.03308486 9.50481700 9.56003681 10.25877765 0.80719003 8.22500687 6.75668974 10.67721082 4.34320882 10.45856492 NA 11.81165578 2.18567629 4.24011585 8.85043315 4.88337155 5.91149026 9.88557208 8.96197256 8.46964467 -0.51477929 13.40367032 -0.51477929 10.39436933 -0.51477929 6.12908309 4.86026759 8.41596354 8.89355607 15.069294 5.415965 8.921938 11.807154 9.253411 10.618690 12.365001 12.214953 11.082972 11.221370 12.924668 12.021838 9.194310 8.977080 1.485221 7.482405 11.228167 10.7523055 6.7613504 8.8526409 8.6538984 9.6526444 9.8292226 6.9114915 5.3307161 9.1708512 7.7212407 -0.5147793 6.0087872 8.0182642 8.2233188 9.2292192 8.7888015 8.1109353 10.2434495 7.0009262 11.0124590 9.8737818 14.5853342 9.1620650 10.5710306 8.1380711 -1.5145732 8.4409779 5.6848973 7.1326848 10.2719043 4.6349707 10.9632375 9.6048160 7.2165451 13.5079409 10.7236311 9.8893035 12.2537208 8.9569014 9.9172462 2.2925756 TCGA-AR-A0TW 50 0 NA 3009 breast stage iiia t3 n1 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 72.63.0 3 1 4 3 1 4 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.65025350 2.56359746 5.45976602 11.75479754 NA 9.74847650 -0.60625433 9.18320983 11.89985981 10.20865918 10.33252065 7.61284491 8.19295803 8.71447667 4.17503750 9.58658537 11.45605974 9.47449384 6.44895875 5.16185947 10.50904506 8.90937620 14.72005304 10.83012750 8.79242006 11.20223827 6.76436341 10.47482670 NA -0.02136504 8.13007834 10.45808215 12.57062850 8.90444044 12.97134107 12.78552395 9.19052696 4.17503750 1.39369076 5.66046376 8.34204355 9.71165407 5.57358660 12.51504784 -0.60625433 8.68944524 14.41957276 -0.60625433 9.26025976 11.18707631 9.02029800 9.52810262 1.39369076 14.03652669 12.05712314 -0.60625433 8.46513863 NA 5.32441460 10.03617925 10.16969793 9.57358528 9.37524344 9.53066734 9.40839407 1.20100647 10.99126326 10.59181432 5.40490312 7.45707137 NA 11.82465140 14.34058250 8.30557752 9.28013487 10.56140796 8.97863868 -1.60647397 1.85311739 7.57109579 9.11392054 10.20223821 -1.60647397 4.37095936 7.43259535 8.61767793 9.83610150 5.50220010 6.92115304 4.60312781 10.50546394 11.32994609 1.39369076 13.77437402 4.96352961 7.52553334 10.77738051 11.05344916 12.52585460 7.21704358 11.08280064 10.04068480 9.45166796 10.38767606 5.05188974 8.10963846 11.45183711 9.57482850 -1.60647397 10.38590650 9.14605693 -0.60625433 1.09410092 9.38307071 10.10362156 9.75287668 8.29755828 15.40951592 10.28545990 10.53674047 6.33031458 1.20100647 15.09769899 6.81574064 11.49860252 11.37649161 10.58874077 8.77845994 7.96732368 10.74643975 -0.00754390 0.15136000 -0.01732500 -0.00034939 -0.01003700 0.37438000 0.37717000 0.28638000 3.38950000 0.49069000 0.49069000 0.49069000 0.36961000 -0.39314000 0.32971000 0.37520000 0.37520000 -0.00034939 0.37882000 -0.01636300 0.37569000 0.00284110 -0.40501000 -0.03419100 3.65510000 -0.40102000 0.29493000 0.29493000 1.01460000 -0.41106000 -0.38867000 0.00631470 -0.00034939 -0.01801200 0.35145000 -0.39146000 -0.40865000 0.28638000 1.54470000 -0.80389000 -0.41778000 -0.00574770 -0.79398000 -0.80729000 -1.10260000 0.00000000 -0.00325800 -0.70760000 -0.38778000 0.21937000 -0.39135000 -0.00034939 0.69867000 0.69867000 -0.02000300 -0.00593250 -0.86378000 -0.08287000 -0.40501000 -0.03419100 1.23470000 -0.40102000 0.29493000 -0.17734000 0.41752000 -0.39068000 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 8.28394029 12.41795019 7.66513904 8.35077833 3.85244836 10.48246443 0.39363586 NA 8.79455558 7.89551348 NA 5.75210898 0.97863496 10.92457018 8.83142823 1.85311739 6.68369505 8.37238669 11.60160567 11.27651027 9.34817066 7.81784259 9.64811433 0.71562984 7.51002038 9.40839407 2.91724078 NA 11.37077725 1.85311739 11.59104650 12.45808218 7.62729603 10.19700015 7.92505768 10.50350686 1.71558591 1.85311739 NA 4.03753158 9.19133785 10.06300429 9.33692358 1.39369076 9.68673967 5.38235945 10.65488964 6.10103440 9.89551348 NA 11.33417338 3.52295966 1.97863496 9.41442014 6.40702637 7.32441370 8.80730404 8.97769922 10.31402906 -0.02136504 13.44237594 -0.60625433 11.89439364 -0.60625433 9.21704358 2.64159227 8.34204355 9.31030217 12.483229 6.459766 9.937192 12.971341 10.251269 10.796955 12.515048 12.653272 9.313284 10.942498 13.107170 11.890655 9.113921 7.390856 1.563597 8.530667 11.726832 11.0368560 5.5022001 9.2210189 9.7424044 7.9823907 10.5694565 6.8324685 8.7534257 10.8301275 4.0941178 NA 4.2516585 8.1469764 9.9162578 10.3456894 10.3738158 9.8638267 10.8407594 7.1147751 9.5735853 10.2094598 10.4563970 9.2477654 10.2655814 9.2422991 0.3936359 9.0206628 7.4380707 8.7324127 9.8361015 5.6224941 10.2356336 10.5054639 7.4215818 12.8654149 10.3336226 10.2740250 12.7130661 9.8623003 9.2578623 2.9786350 TCGA-AR-A0TX 64 0 NA 1972 breast stage iia t1 n1 m0 7-8-2014 female 2005 NA NA infiltrating ductal carcinoma yes 3 NA NA 72.61.0 6 3 2 5 3 5 2 6 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 7.111509e-06 1.942656e-06 11.630521 7.285465 7.109268 11.323682 1.021835 9.885474 NA 10.318721 12.073013 7.388127 8.841983 7.521650 8.601749 9.577033 7.029299 9.722822 11.173244 10.826473 7.646295 6.660843 10.285465 10.565803 14.883537 10.969198 9.441765 10.635594 8.077087 10.129893 NA 3.928692 9.900877 11.867425 11.855880 7.014270 17.214197 14.324467 9.896274 5.675246 2.829159 5.871469 8.755385 9.988069 6.560963 13.089463 -1.563199 9.879785 12.725636 3.244202 9.171340 10.292878 10.141610 6.591660 NA 14.934848 10.850205 3.436841 9.044172 NA 4.846233 10.394669 10.143338 9.705384 10.518991 10.236124 9.884958 3.021800 11.729020 10.313742 6.708305 7.044172 7.040468 10.300254 14.533125 8.264328 11.628364 11.338652 9.031166 2.343720 2.524314 7.934694 9.074372 11.955126 -1.563199 5.656010 6.198394 10.142906 11.387944 4.758772 7.767759 6.073467 10.079796 11.551072 3.244202 12.878684 5.481238 6.665660 11.475246 13.294483 12.611143 7.025556 10.174089 11.025088 10.412801 11.285660 4.811882 8.864155 11.540130 11.054539 1.021835 10.473702 8.595451 1.606774 4.081851 10.126403 10.436137 9.480553 9.734905 14.538182 10.613638 9.702457 7.738338 3.137274 15.988483 10.056145 12.940419 12.200677 9.570626 9.682989 7.769997 9.840424 -0.00069303 -0.00346270 -0.00346270 -0.41113000 0.01922300 0.02062300 0.00875280 0.01133300 0.01133300 -0.42254000 3.65690000 0.00499690 0.00000000 0.00000000 0.40577000 -0.00470790 -0.00470790 0.00013863 1.19500000 -0.42385000 0.00360760 -0.41586000 -0.02137300 3.65690000 -0.42200000 -0.03572100 -0.03572100 -0.03572100 2.88280000 -0.00069303 -0.00069303 -0.00539920 -0.40285000 0.02062300 0.02062300 0.00875280 0.00875280 0.01133300 0.01133300 0.01237600 0.00152550 0.00152550 -0.42254000 -0.00719580 -0.00719580 -0.00719580 -0.00719580 0.00000000 0.00000000 -0.42233000 -0.00470790 0.00013863 -0.41058000 -0.43446000 -0.40550000 -0.00696210 -0.41586000 -0.00069303 -0.02137300 -0.42985000 0.00708260 -0.03572100 -0.03572100 -0.01161100 -0.00899060 0.35235000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.385 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.385 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 9.8657254 13.0097197 7.6340588 10.0302330 4.7943951 12.2608061 4.8291595 0.4368015 8.4055087 9.1083831 NA 7.6535875 4.5453692 10.7551022 8.9446365 1.8962718 10.4244612 9.4347270 11.1879674 11.3316597 9.6662977 7.9952623 10.5612863 2.4368548 6.3793558 9.8849582 3.4812343 NA 10.8821154 1.8962718 12.4861799 12.4362254 8.6389658 10.2728922 7.7360501 9.2124521 6.6365144 2.4368548 -0.5631985 1.6067738 8.2633903 9.3025752 10.4791853 5.5453661 8.3924192 7.2602092 9.4785011 7.8735536 9.7711152 -1.5631985 10.9080090 3.9604005 3.9604005 9.6174100 6.1250931 7.2050259 9.2909310 9.4961863 9.3399704 -0.5631985 13.8320078 1.0218350 10.8644166 -1.5631985 8.0255565 4.0515548 8.2361233 9.3217755 12.165684 6.502930 8.763271 17.214197 9.624194 10.391402 13.089463 9.448768 9.200054 10.789989 12.630367 8.200054 9.074372 7.932697 1.244217 6.361654 12.250122 11.335065 5.492126 8.767759 8.684769 7.865202 11.009542 8.226376 9.213275 10.969198 6.867295 NA 5.080696 7.838596 12.626358 11.186921 7.596713 8.360169 10.748023 8.847293 9.705384 10.669862 11.388855 10.287810 10.338463 9.417695 6.244196 10.015946 8.578579 8.200054 11.387944 7.964319 10.769292 10.079796 7.442467 13.606649 9.858381 10.494495 12.265375 11.110151 9.564836 3.722247 TCGA-AR-A0TY 54 1 1699 NA breast stage iia t2 n0 m0 2-7-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.54.0 3 1 4 NA 1 4 1 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 1.00121e-06 2.781139e-07 12.31709317 3.79353178 6.12881716 11.71405718 0.36725922 10.19222524 1.36725922 9.35595118 11.31271032 6.72041392 10.08451451 7.99844376 8.18425004 10.25524862 8.63756171 8.82259377 9.35949679 10.67986588 6.31563325 2.06770755 9.18425004 8.68128305 15.68139827 11.11922887 9.91560679 11.50008748 3.17461415 10.22874114 -1.63262893 -1.63262893 9.11041780 12.40567110 13.18874153 6.69818374 12.18325009 12.63288152 8.28612986 6.32726879 3.27415728 4.65267005 8.12548993 9.43200919 8.29059397 12.84673098 NA 11.45041334 13.18509955 2.06770755 8.70387347 11.79980837 3.98198048 6.09518601 1.68920969 11.85630032 8.72261766 2.53719665 7.08836530 NA 4.51701107 10.55121193 8.66073827 6.68467850 9.19302039 10.39344409 8.76172907 -0.04781556 11.08686920 10.27865841 5.61519262 7.20015611 4.81021172 10.66876269 14.16211383 8.03349073 10.64513502 10.62936136 12.23464175 1.17459817 7.30390401 7.50425729 9.45671705 9.72206687 0.36725922 4.32146636 8.28612986 9.47709707 11.43554093 3.82670101 4.51701107 4.12215087 10.28947923 11.78590973 6.43872866 13.74972163 2.89083577 7.78300803 11.70460961 13.77174283 12.41362314 7.99662319 11.05966406 11.11797348 9.67105289 10.52934309 5.02547624 9.22524745 11.48539644 6.78511893 NA 9.83181218 10.77373727 -0.04781556 3.18181815 8.16492804 11.34239790 10.51764843 8.43738756 15.14628041 9.65093362 10.79090771 6.67560566 0.36725922 14.54853522 7.30390401 11.29077969 10.82207978 9.38685728 9.16249455 9.02815361 9.71243879 0.00000000 0.00000000 -0.00235530 0.02920700 0.02721600 -0.72721000 0.02202400 0.01488800 0.01488800 0.79026000 -0.13238000 2.83490000 0.06408200 0.01670500 -0.00290910 -0.00041585 -0.00041585 0.00138680 0.00652620 0.01684500 0.01419000 0.52941000 -0.74281000 -0.74560000 3.65690000 -0.01656700 -0.01656700 -0.02164700 0.66272000 -0.74560000 0.00000000 -0.72287000 -0.72376000 -0.72721000 -0.71347000 0.00221930 -0.71631000 0.00903120 0.01488800 0.01488800 0.01028500 -0.00622860 -0.75978000 -0.74699000 -1.29290000 -0.73735000 -0.73468000 0.01670500 -0.53073000 0.01726400 -0.00041585 -0.73558000 0.00652620 0.00652620 0.00291330 0.01419000 -0.15745000 -0.75487000 -1.29290000 -0.74560000 0.01558700 -0.03885000 -0.75866000 -0.76766000 -0.53002000 -0.76612000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.090 -0.766 0.000 0.000 0.000 0.000 -0.727 -0.727 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.737 -0.737 -0.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.090 -0.766 0.000 0.000 0.000 0.000 -0.727 -0.727 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.737 -0.737 -0.218 7.40618544 13.13555420 3.75958197 8.25753069 1.73322417 10.47219276 2.27414236 NA 8.79143284 6.74230539 -1.63262893 6.67560566 -0.04781556 11.36885062 9.85158587 5.10873353 7.48620754 9.33881013 7.08151220 9.29874262 9.53381872 7.37849342 11.22369199 1.36725922 7.27415728 8.76172907 0.95225901 NA 10.58915562 0.36725922 13.82954506 12.70272662 7.21275608 10.38477091 6.81434918 9.96112436 6.90254153 8.76065708 -0.04781556 -0.04781556 9.12465641 9.90594036 10.57305977 4.20015905 8.09637730 7.64803755 9.80865453 5.57671864 11.38859349 NA 9.75851006 1.82668068 4.45472864 10.05315411 5.60633858 4.84299894 8.19381510 7.64571607 8.11881029 1.36725922 14.23953253 2.27414236 11.19817778 NA 9.65958817 4.87506247 8.64803719 6.30978010 14.017320 8.429313 8.137104 12.183250 10.693415 10.826954 12.846731 12.126114 9.006290 10.790028 12.250292 10.566018 9.456717 8.737954 2.826701 10.142465 13.571455 10.047186 3.454729 8.995712 10.128818 8.697063 9.479289 5.333052 9.158429 11.119229 4.122151 6.724818 4.433353 7.884011 9.616380 9.928554 6.702656 10.008867 10.175426 3.826701 6.684678 10.550592 11.396899 9.170590 9.713226 9.822594 NA 9.146329 5.565073 6.661888 11.435541 5.859120 9.772940 10.289479 7.491775 14.098028 10.562946 11.499927 10.640188 10.491388 8.143700 2.274142 TCGA-AR-A0TZ 43 1 3262 2316 breast stage iiia t2 n2 m1 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 72.63.0 3 1 1 3 3 2 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.9595568 4.5950560 6.8705324 11.8283412 NA 10.8694261 0.7441611 10.5684740 11.9511243 11.3684704 10.3722521 7.9297803 10.3678174 9.5524718 7.9605968 7.6883860 10.7312581 9.5090687 6.6579415 -1.0631077 10.3631070 9.1036330 14.3874091 12.0190745 9.3216260 11.0108164 3.8675802 10.2987860 -2.0631077 -0.0631077 7.8586829 11.1020633 13.0070471 5.5218046 13.4115939 13.6897194 9.9414139 6.9198358 3.6917351 5.3377218 8.5274293 9.3962738 7.8316600 13.0429553 -1.0631077 8.4740608 14.7430646 4.2766902 8.5702735 11.3438444 5.7050268 7.1117679 -2.0631077 13.7308303 10.5664266 0.9368169 7.6933984 -2.0631077 3.1847722 10.5346620 10.6858736 9.4316977 10.7965711 9.5367550 9.2993340 3.1847722 12.5204539 10.7202498 6.2587695 6.7697321 0.5218548 11.2005516 14.3543157 9.1580547 12.1441617 11.7063702 7.9368423 -1.0631077 5.1462968 8.7140975 9.5538504 10.8278664 -1.0631077 3.9812407 6.7247444 10.0106491 11.1629533 5.3291595 5.2129661 4.5218046 10.0450399 12.0978166 5.9921249 12.8954403 5.3377218 6.9424664 11.6005115 11.2447545 13.2164165 6.8346872 10.2573607 11.1725573 11.2665615 10.9370184 5.8437327 8.2440431 11.5762960 13.8699566 -0.4781452 10.3329117 8.9716413 NA 3.7750400 8.9592100 10.6515171 9.4832545 9.6549469 15.0736832 11.3370546 10.3272799 7.9975380 0.5218548 14.8433571 6.2129661 12.5448082 10.9934800 10.1133271 9.1346733 8.6189592 10.4332666 0.01362700 0.01362700 -0.00047474 0.03998400 0.00980770 0.00716260 -0.03141700 0.01064400 -0.87825000 0.00660620 0.00660620 0.01510800 0.00327090 0.01329300 0.03025000 0.88697000 -0.90907000 -0.87318000 0.00000000 -0.87310000 -0.03645900 -0.04247400 -0.88761000 0.02062700 0.02062700 -0.02348700 -0.02348700 -0.02348700 0.48261000 -0.89797000 0.01362700 0.01410500 -0.87902000 0.00716260 0.00716260 -0.05213200 -0.05213200 0.01064400 -0.87825000 -0.88715000 -0.00172170 -0.00182290 0.00660620 -1.04370000 -1.04920000 0.22462000 0.25427000 0.01329300 0.01329300 0.03025000 -0.87666000 -0.87318000 0.00000000 -0.00433110 -0.87310000 -0.03645900 -0.03445000 -0.89192000 -0.89629000 0.02062700 0.01580700 -0.02348700 -0.02348700 0.02434800 -0.86644000 -0.89660000 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.396 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.396 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 8.0661253 12.8556589 7.8240626 9.7353140 2.7948317 12.0748740 -0.0631077 NA 8.4885504 7.7776203 -2.0631077 7.2737285 3.9141244 10.2598971 10.0089748 4.6233401 7.4740604 9.1186157 11.2569376 9.9609430 9.7714792 8.9557379 9.6368484 2.7948317 8.4105480 9.2993340 2.1067838 1.6372856 10.5563744 2.9368358 11.2154369 11.1674632 7.7963771 9.8804560 7.7441974 9.4206580 6.2268611 0.7441611 1.1067503 4.6092704 8.4594238 8.7728925 9.6185199 2.4604018 4.6917296 7.3777112 9.7815481 5.4682249 9.8236820 -2.0631077 9.9442200 3.7948213 4.8557057 9.7307991 5.1664303 -2.0631077 8.1823949 7.2965914 8.7304457 -2.0631077 13.1637060 0.2588204 10.1948193 NA 7.5806988 4.3118809 7.6057269 8.5923729 14.829983 7.476001 8.702543 13.411594 9.714098 10.170162 13.042955 11.562437 9.519342 10.586547 13.055621 12.573920 9.553850 9.021651 3.222248 7.156011 13.302925 11.7842911 7.4545115 9.2976894 10.2688788 10.5225091 11.6740061 6.1511607 9.6250926 12.0190745 6.1656608 2.1847564 3.1847722 8.4688667 12.2056766 10.3636312 8.2877816 8.9276553 14.0567763 3.8675802 9.4316977 10.6736669 10.8133592 9.8456102 11.2291639 9.0002372 3.6647673 8.5062612 8.5873646 1.3962691 11.1629533 7.3053486 10.9171604 10.0450399 8.5227624 13.0725912 10.1930510 9.0163269 12.3073934 11.2288762 9.7998670 -0.0631077 TCGA-AR-A0U0 73 0 NA 1988 breast stage iib t2 n1 m0 2-7-2014 female 2004 NA NA infiltrating ductal carcinoma no 0 white NA 74.56.0 4 4 4 1 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 12.7934045 NA 7.4082278 11.8366556 NA 10.7384427 NA 9.6883358 11.4572484 8.8826910 9.2419343 8.1284759 6.9087721 9.4708398 7.2577018 8.7100718 9.3146752 10.4652589 8.3796920 6.9134627 10.4608585 10.5917547 11.8871699 9.5965034 9.9245453 10.4226984 7.8191042 10.5972253 7.4115483 3.1061138 9.1132629 11.2031827 12.2318740 7.6634848 12.1353955 10.2003060 8.6466768 6.6579043 4.4795669 2.7341351 8.0020279 5.5535663 4.2012653 3.7341351 NA 12.6684375 7.9618265 6.7447087 9.6289573 11.1452766 4.2012653 8.6662673 1.6466696 16.4888754 13.4317715 1.6466696 9.8002287 NA 6.4540311 10.4255752 9.7087228 9.5139555 9.0162740 9.7823860 9.6445619 -0.3532843 10.9547313 10.6515994 5.5655393 8.0151831 3.8165997 6.8512481 14.0470892 8.1279515 11.5809204 10.8343381 10.5369410 0.9685700 -0.3532843 8.9481730 8.6239565 13.1877733 NA 2.5535571 7.1224097 10.6780333 9.0750368 5.0729418 7.9204726 5.0217151 10.5811047 11.4726293 3.5535694 13.3648350 3.8946044 6.8850813 10.7404244 13.2572402 12.6821632 5.2613879 10.6714701 11.2556245 10.2903841 11.0896202 4.0389980 7.6268166 11.4888306 8.7733812 0.2316782 10.0813049 9.8784979 1.6466696 3.0272602 9.6676566 11.7701515 9.9028855 9.2222160 14.9392140 10.1091790 10.6477330 6.0560676 1.4540179 12.6633979 7.7964238 12.9121453 12.9641600 9.5031022 8.4843045 7.6634848 9.7571600 0.1077400 0.1077400 0.2125300 -0.0899640 0.0353830 -0.1126000 -0.2873100 0.4861300 0.3302400 -0.3557800 -0.3557800 1.1795000 0.0012481 0.0012481 -0.2880100 -0.2880100 -0.2180000 -0.3002800 -0.3002800 -0.3233300 -0.2611900 -0.3333900 -0.0220490 -0.0220490 -0.0220490 0.3309200 0.3309200 -0.2131700 -0.0131470 0.0194100 0.1077400 0.0130310 -0.0899640 -0.1126000 -0.2704000 -0.6387600 -0.2913000 0.4861300 0.4861300 0.3481100 0.2997900 0.0266540 -0.3557800 0.2991500 0.2991500 -0.3191400 -0.3191400 -0.7049600 -0.5872600 -0.3079300 -0.2180000 -0.3002800 -0.3002800 -0.3002800 -0.3156400 -0.2611900 0.4057700 0.0000000 -0.0220490 -0.0220490 0.2087000 0.3309200 -0.2131700 0.4267100 0.4331100 -0.2745200 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.486 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.486 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 8.6124609 11.7620455 NA 7.3013124 4.3471199 10.7221559 2.3471270 6.0560676 9.5781530 9.5023238 NA 6.3401634 5.8946044 11.4791712 9.5899241 1.2316167 4.6910707 10.2673547 7.4378394 9.7499646 9.2913982 6.7913348 11.0317302 2.5429514 9.2003060 9.6445619 1.6466696 -0.3532843 10.1790326 2.5535571 12.6934597 12.3044417 7.3881439 10.6738916 12.6852528 10.6941415 4.4540311 1.9686069 NA 0.2316782 9.1224103 8.8327910 6.0303802 1.2316167 8.7733037 7.5231934 10.3142318 5.2465905 9.8096974 3.9686069 12.9108994 3.8165997 3.8561292 9.8526593 6.3196685 8.1385298 9.1395314 8.9424456 9.5655399 9.9887514 13.1061724 0.6467157 11.2505348 -1.3532843 9.7785337 3.9320801 8.1284759 6.6745821 12.812604 6.995405 8.547544 12.135396 9.694482 11.478578 3.734135 6.571489 9.455271 10.320869 13.455892 11.396127 8.623956 9.313788 2.816600 7.821602 10.932368 9.830312 5.038994 8.583314 8.462060 9.310173 8.791870 7.865845 4.691071 9.596503 9.422287 NA 7.485881 10.064097 11.425165 9.961826 8.239134 9.144528 8.632519 8.816602 9.513956 10.432129 12.002303 10.226464 10.453629 8.863422 3.170246 9.480682 7.146523 9.017364 9.075037 5.836502 10.566657 10.581105 7.687460 12.934894 11.613903 11.056598 13.254585 10.732149 8.880296 3.504659 TCGA-AR-A0U1 36 0 NA 3101 breast stage iib t2 n1 m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 85.58.0 NA NA 4 NA 1 3 NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.362758e-06 2.781139e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0000000 0.1322900 1.1591000 -0.3295900 0.4522400 -0.2021200 1.0319000 -0.1238200 1.0247000 0.0637950 0.0637950 0.4610900 0.0091631 -0.3477900 0.0662290 -0.3110800 0.0873900 0.0846430 -0.3492500 -0.3506500 0.0513870 0.8451400 -0.3079200 -0.3079200 0.0982700 0.2756800 0.0606510 -0.3088600 0.1008900 -0.1731000 0.0000000 -0.2328800 -0.3295900 -0.2021200 -0.2021200 -0.3496200 -0.3525700 -0.1238200 0.4643400 0.0937660 -0.0284910 0.0852210 -0.3448100 0.4587100 -0.3373300 0.0712480 -0.3152900 -0.3767900 0.0619370 0.0943460 -0.3752700 0.0846430 -0.3361800 0.0989970 -0.3330600 -0.3341000 -0.3329800 -0.0295840 -0.3079200 -0.3079200 -0.3574500 -0.2262500 0.1144800 -0.3180200 -0.1363900 0.1105200 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.331 -0.331 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AR-A0U2 47 1 2551 NA breast stage iiia t2 n2 m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 74.60.0 3 1 1 3 3 3 1 1 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 1.14478e-06 2.775223e-07 10.7265544 3.8654042 7.7202039 11.3730275 0.3108054 10.6231284 4.1437036 10.2304209 12.1137329 7.8863520 10.6958661 7.5251316 8.7020563 9.9658961 5.7031312 9.6191518 10.8557771 9.0480601 6.5729079 3.7031339 9.7344539 8.4141004 13.0366049 11.1961277 9.9841218 10.4235780 6.3442355 11.0157970 -0.6891946 -1.6891946 8.8711457 12.1574784 11.4573813 6.1749996 12.6416595 13.4939828 8.5563654 6.4193366 2.7031229 4.3331804 8.1405353 12.2379425 5.8343750 12.7620882 2.6327335 8.6617517 13.2027388 2.7702370 8.6901911 11.4843337 8.7433547 6.8768668 2.8957679 13.1099167 11.5685202 -0.1042321 9.3795909 NA 4.3108127 10.4445971 10.5248282 9.8663605 8.5348145 9.9654487 9.0615197 2.6327335 11.7567328 9.9951230 5.2296764 7.4349342 5.2177038 8.1181676 13.5576275 10.6438841 11.8421941 12.1296944 9.1221874 0.8957679 1.4807304 8.5646602 9.2873767 10.4307264 -0.6891946 4.5587391 8.4981647 10.3507599 10.7671671 3.4401017 6.5251324 3.7370810 10.6694639 12.0603679 5.0387347 12.5181321 5.0112541 8.4994015 10.8896570 10.2657360 13.1899651 5.9761482 10.3919633 11.2456093 10.9872150 11.6647865 4.9255248 9.5593333 12.3523007 9.3255306 -0.6891946 10.7186116 9.6037094 1.8957679 3.4511847 9.6606468 10.9949038 9.9328645 9.4160664 15.2342678 10.7244406 10.2646454 6.6327408 1.7702370 14.8715933 3.5202714 10.7228532 11.0558567 9.8205876 9.4304024 8.2326536 10.5373603 -0.348020 0.288810 0.288810 0.459730 -0.357950 0.074066 0.040326 0.054518 -0.356910 2.081800 0.049398 3.597600 0.332700 -0.300870 0.426030 1.217000 1.234200 -0.358060 0.377920 -0.350880 0.019083 0.353770 -0.372340 0.101030 0.101030 -0.358740 -0.358740 -0.360680 0.749180 -0.348020 -0.348020 0.000000 -0.821540 0.074066 0.073546 -0.835190 -0.348470 0.054518 -0.356910 -0.380490 0.088837 -0.333230 -0.864840 -0.375720 -0.326700 0.021603 0.021603 -0.300870 -0.300870 0.051814 -0.363860 -0.358060 0.377920 0.377920 -0.350880 0.019083 0.367390 -0.820150 -0.372340 0.101030 1.433300 -0.358740 -0.360680 0.749180 -0.833380 0.665120 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.391 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 -0.299 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.391 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 -0.299 8.0823024 11.3775746 5.0522811 7.7286654 4.3331804 11.5378269 1.1181604 NA 8.1261960 7.0421321 -1.6891946 6.8287179 NA 11.6542760 8.9310326 6.3108127 7.8126497 11.1060407 6.9474371 9.9176806 9.8226790 7.8787689 10.2259451 1.1181604 6.8499717 9.0615197 0.3108054 1.1181604 10.2195806 3.4401017 11.1195758 11.6492705 7.6100208 10.4659471 7.9419895 8.9920512 8.0042997 2.4807304 0.3108054 3.0112451 7.9564708 7.2177028 9.9955613 2.0112451 8.0712167 6.6145935 10.3758922 7.4554711 10.5982365 NA 8.2177033 3.3552136 4.7865441 8.9707194 5.1100291 4.6327393 8.2938064 8.6270943 8.2326536 0.8957679 13.2112078 1.3108054 9.6528873 NA 9.1578701 4.1687944 8.2041143 7.5611107 15.153792 5.925522 9.103603 12.641660 9.567021 10.715156 12.762088 14.321537 8.696675 10.645645 12.496308 11.510332 9.287377 7.371508 3.865404 7.832413 11.894248 11.073402 8.159435 8.607729 9.969917 10.815632 10.793946 5.842194 9.431699 11.196128 6.500638 NA 5.193456 8.656994 11.204873 10.063611 9.556942 9.333874 9.221455 6.600832 9.866360 10.589843 11.683950 9.800159 11.305166 9.892955 2.632734 9.058511 6.774338 6.539632 10.767167 6.031911 10.777909 10.669464 8.737077 12.583224 10.029774 9.987651 11.646622 9.548023 10.545929 2.770237 TCGA-AR-A0U3 59 0 NA 3468 breast stage iib t2 n1 m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 74.60.0 6 3 5 3 1 4 1 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5.562279e-07 1.946798e-07 11.8492780 4.6496040 6.6820268 12.7720807 -0.8097012 10.5722576 -0.8097012 10.3091151 11.6114499 7.7370682 9.9180944 8.0293778 8.8992578 9.0743446 7.0167225 9.1000670 10.1038114 10.1038114 6.2454557 1.5121257 10.0743445 8.0071574 13.7368274 11.7078434 9.3168784 10.6242810 5.3799986 11.3682163 -0.8097012 3.0970714 7.4755762 11.6328584 12.0792977 7.6699544 12.2304637 13.4770927 7.0666909 4.7447639 -0.8097012 4.5824898 8.2263476 10.3271651 6.3194572 13.5256341 1.5121257 11.0616943 14.1826256 3.4381065 8.9567029 10.8919136 7.9910739 8.5974418 3.5824958 14.2597366 10.1378109 2.3601114 9.3065179 -0.8097012 4.1901723 10.1282833 11.2633114 9.4117612 11.3647877 10.6905180 8.9682512 0.7751770 11.9965222 11.4604693 5.3600973 8.8122258 3.2776426 12.2083742 13.8827350 9.1738517 11.4051002 11.0427035 9.7176511 -0.8097012 4.9715344 7.2882063 9.2696588 11.2488423 NA 4.5824898 7.5867790 9.8714125 11.3415077 4.9975273 5.4569605 3.9975273 11.3456247 11.6248022 5.9044191 13.6761919 4.9180952 7.2934615 11.6174868 12.8422347 12.5992997 8.4870904 10.6885246 11.4607613 10.7032748 11.1108990 5.5824928 9.1745924 11.8537321 8.7826310 NA 10.2208412 9.9583583 0.1901723 2.0118892 9.2372979 8.3449922 11.0143372 9.6850296 14.9177488 10.0643870 10.3569648 7.6618493 2.6496155 15.1865151 10.5771143 12.4257395 11.0497088 10.4002365 9.0773947 8.6516534 10.1488645 -0.0626290 0.0578500 0.6355400 0.0083351 0.0068044 -0.7497400 -0.0056757 0.0171240 -0.7523600 3.6569000 2.4426000 1.2743000 0.0465590 0.0197350 0.0069435 2.7896000 -0.6685500 0.1469700 0.0376410 0.1527800 0.0352950 -0.0956480 -0.7032500 -0.6357600 -0.4307200 -0.6290300 -0.7207500 -0.6351900 0.0669450 -0.6582600 0.0241270 -0.7490700 0.0420240 -0.7318700 -0.7517600 -0.0094046 0.0000000 0.0171240 -0.7513200 -0.7735400 0.9591900 0.0418830 -1.1354000 -0.7444700 -0.7444700 -0.7060300 -0.7060300 0.0062481 0.7053200 0.0069435 -0.7514200 0.0253900 0.0376410 0.0376410 0.1527800 0.0352950 -0.0956480 -0.7404600 -0.7032500 -0.6357600 0.0267950 -0.6082500 -0.6412300 -0.7287000 1.0659000 -0.7207500 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 0.000 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 0.000 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 8.1530701 12.0547471 7.0103524 9.3246002 1.2708279 11.6626110 0.7751770 NA 8.6455014 7.0789172 NA 7.1673971 5.4569605 9.8158828 8.6659076 0.1901723 8.1000673 8.9383670 9.4153814 9.4105523 9.6207834 7.5867790 10.0458212 1.1901723 9.9959179 8.9682512 1.1901723 1.7751348 10.1127584 0.7751770 12.1123867 12.0274077 7.1385411 10.2097648 7.8661309 8.8854023 5.2125421 2.3601114 0.7751770 7.8122261 8.0910407 8.1443702 10.4950957 2.8906218 5.1277529 5.8906145 9.6780140 6.6820268 9.3738094 NA 10.5646702 2.8906218 3.9450645 10.0053492 6.3939618 3.3600973 9.8897464 7.3550806 8.2041945 1.9975453 13.3633046 0.7751770 9.9341669 NA 7.7938003 4.9180952 8.1674538 8.7844987 15.093659 5.475578 7.586779 12.230464 10.710793 10.979300 13.525634 11.813141 8.695985 11.525564 12.377062 10.478463 9.269659 8.327165 1.512126 7.240022 11.704395 10.684530 7.433348 8.676003 9.924037 9.046600 10.116848 5.565213 9.671973 11.707843 8.035664 NA 6.869654 8.302561 9.815883 9.756228 8.904024 8.843019 12.161538 5.512104 9.411761 10.797967 9.249518 8.828610 10.423794 8.974809 NA 8.790254 8.512102 4.438100 11.341508 5.997530 9.637257 11.345625 7.466298 13.549237 9.917244 9.822260 12.700938 10.434538 9.428579 0.775177 TCGA-AR-A0U4 54 0 NA 2615 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 74.60.0 4 4 4 1 3 3 2 5 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.0094724 4.8847493 6.0583988 11.0864750 0.4584870 9.3906999 NA 9.1113300 11.8530818 10.1445479 10.0625751 7.3288499 7.9055681 9.9722127 8.4683137 8.9382655 9.0621115 10.7986135 8.5015124 3.1589186 10.0819095 12.7379506 14.9491950 10.3303904 9.4328997 10.8598981 6.3472280 11.2459797 NA -0.5416180 9.4414787 11.1425762 13.4177174 7.6606092 10.5800186 10.7826657 10.5561882 7.2976885 5.2266704 6.6082326 8.3980643 10.3472284 7.6233921 11.0314222 -0.5416180 11.0773295 10.1718717 5.2398448 8.7485042 9.7798497 6.9301601 6.4068530 0.4584870 14.1634400 9.9098560 1.2658569 10.7273195 -1.5416180 4.1589267 9.4090410 10.3357693 9.0121144 9.7622659 9.7235140 10.2295618 1.9179282 10.8033359 10.6535498 6.2463872 8.2463877 0.0434845 8.4170377 14.8652383 7.9744020 10.6495444 10.6421206 11.3438002 1.0434145 1.7803941 8.4443271 9.7070058 10.4732031 1.7803941 4.2398486 7.3743649 9.2520885 11.2171248 4.6082297 8.5630838 5.4584837 10.8459640 11.8816011 1.4584870 13.3636371 1.6284003 7.3380687 11.5523978 10.2349182 12.6467649 5.7894032 10.2682533 11.4459268 11.1220855 11.5858347 4.6264041 7.8116322 12.5727155 9.3921757 6.5617737 10.6983820 9.6439801 0.0434845 3.1092435 9.9158661 11.5086739 9.2802592 9.2890003 14.7258937 11.3321215 10.0283408 6.0583988 0.4584870 12.1011010 4.0731947 13.1706897 11.8108045 9.6891061 10.3574644 7.9722130 9.9555536 0.00000000 0.42943000 0.91362000 0.03469800 0.29392000 1.20920000 -0.00081083 0.06081500 0.03095200 0.10601000 0.10601000 0.90536000 1.40680000 -0.16315000 -0.35314000 0.41047000 -0.16238000 0.59389000 -0.37368000 -0.19310000 0.39482000 0.43938000 -0.38486000 -0.38486000 0.40113000 -0.00441050 -0.00441050 -0.38592000 0.05297300 0.01086300 0.00000000 -0.38457000 -0.36837000 -0.39239000 -0.17070000 -0.37424000 -0.37424000 0.24673000 -0.38020000 0.04351700 -0.17662000 -0.33316000 1.00410000 0.40863000 -0.78789000 0.02148400 -0.36916000 -0.07238800 -0.61344000 0.48736000 -0.16177000 0.29742000 0.03738000 0.03145700 -0.24738000 -0.19748000 -0.37988000 -0.38815000 -0.38486000 -0.38486000 -0.00205760 -0.00441050 -0.38592000 0.31705000 0.00724260 0.00599080 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.647 0.647 -0.369 -0.369 -0.141 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.647 0.647 -0.369 -0.369 -0.141 8.4386247 14.1104338 0.0434845 9.0923885 3.5185351 12.6754583 2.2658269 NA 9.1458608 7.5191810 NA 8.3513620 1.2658569 10.8617636 9.3631198 -0.5416180 7.6183561 11.1936181 7.2463881 9.3457057 9.1383435 7.0434473 11.0340244 5.7622664 8.0207278 10.2295618 1.2658569 0.0434845 10.1388447 1.7803941 12.7546844 13.0188777 6.4009989 9.1889552 8.8572290 10.0791631 3.6679375 5.3164644 -0.5416180 -0.5416180 8.9158659 8.8784452 7.5164769 3.1589186 6.9911136 5.5459468 9.6433605 6.5406349 10.0396858 0.0434845 11.3661269 4.9342193 5.1999510 8.8141005 6.1211170 5.3164644 11.4128632 9.2577669 6.6776534 -1.5416180 12.7464139 0.7803941 11.5379699 NA 10.2565519 2.1589186 7.8443474 8.5366362 12.5749916 7.3623673 10.0528097 10.5800186 9.1537134 11.1838514 11.0314222 10.0690487 8.8868452 11.7134946 12.9735690 12.4247202 9.7070058 8.4485892 0.0434845 7.9483334 11.7698078 10.100988 5.524575 8.979104 9.466914 7.458485 9.963895 7.701659 6.715873 10.330390 4.239849 2.043450 6.486391 8.852883 13.213112 11.182146 7.772751 8.643361 10.624648 7.409770 9.012114 10.618041 12.030119 10.521206 9.970732 9.482239 NA 9.325161 7.799603 6.179585 11.217125 7.259385 10.718817 10.845964 7.904100 13.602028 10.643670 10.538970 12.905116 11.208983 8.705226 2.043450 TCGA-AR-A1AH 51 0 NA 2298 breast stage iib t2 n1 m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.012037e-06 8.325669e-07 11.531235770 8.667029201 7.415376718 11.207262743 NA 9.564046001 1.008845403 9.207672049 11.307453116 8.298836534 10.368201193 7.348667967 7.931649967 9.695318261 8.497996698 9.224755153 8.878154550 10.526159016 8.704626124 0.008773707 12.047622428 8.795631897 12.138315388 9.432984036 10.671486047 10.533032888 2.008809555 9.662857044 NA 0.745796658 7.395398749 11.132723539 11.555229912 6.939554533 12.687784571 11.675929255 8.173724601 8.547976461 5.798895556 6.563406797 8.812948676 6.963013960 9.044991293 3.178746506 NA 10.609659864 11.438747469 8.493976302 9.179577481 9.783055686 7.008817397 5.205216545 1.883268897 12.489155215 6.372222559 1.883268897 8.896546143 9.987528221 2.671791548 10.059119859 12.218169544 10.050933021 9.972677147 10.445182288 9.025626009 NA 10.374046585 10.524845991 6.412539363 7.403994512 2.883288450 9.444835171 13.290168222 8.743606520 10.756730936 10.374411157 9.499334277 0.008773707 0.423847055 9.509991491 8.780307146 11.295375497 -0.576045406 4.850119312 7.841707745 9.883286770 9.791270028 3.593784005 6.103336072 2.745775149 9.215018197 12.167217033 3.468244433 12.800591091 4.281839175 7.628426584 11.333560814 11.631327185 13.485142016 5.389639082 11.069738747 11.307453116 11.201883028 10.606559931 4.468250951 8.867834703 11.322267652 6.256744616 0.745796658 10.287654324 10.316777394 0.008773707 4.817203689 9.238437701 8.327737207 10.068612775 9.708679388 15.784213658 10.897814606 9.291906022 8.080280313 1.008845403 11.290361446 9.591900408 12.464915387 14.134715448 10.135952280 10.145808881 8.812948676 9.930896528 1.451400 0.397490 0.971720 0.061508 -0.751150 -0.755130 -0.265400 0.759300 0.059651 0.222220 0.802280 -0.770730 0.053094 0.058367 0.058652 0.070243 0.070243 0.050677 0.041600 -0.763380 -0.748460 -0.766460 -0.760550 -0.745860 -0.745860 0.049540 0.049540 0.072971 0.069669 -0.732660 2.168700 0.052099 -0.744820 -0.786230 -0.765690 -0.765100 -0.757800 0.037076 0.059651 0.044715 0.066086 -0.783190 0.222220 -0.765340 -0.755730 -0.748380 -0.748380 -0.768600 -0.768600 0.058652 0.070243 -0.757800 0.028060 1.625800 -0.763380 -0.754610 -0.759030 -0.754440 -0.760550 -0.745860 0.022865 -0.719420 0.072971 0.079735 -0.794420 -0.719150 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.463 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.463 6.862647275 12.014208329 7.976524028 8.798894584 2.185137087 14.059374959 0.745796658 3.124295045 9.298836534 9.372222341 6.558281412 8.113853098 4.573604777 11.596126427 9.754772115 0.423847055 4.763703696 10.937829510 8.012569791 8.953285904 8.736919720 7.345696196 11.312408217 1.231186613 7.792361488 9.025626009 2.816169598 NA 9.159411215 3.281831758 13.807120747 11.885078826 7.409697264 9.756451244 8.227986015 9.915708366 5.709257546 -0.576045406 0.008773707 -1.576045406 7.976524028 9.029334718 4.306495572 4.378053772 9.749340510 7.001284328 9.849595571 5.521886202 9.589390296 5.053211279 11.905150122 -0.576045406 3.423860497 11.080610766 7.013731344 1.593784005 8.119083259 6.845920286 3.781412174 6.547977232 13.519458276 -0.576045406 10.378778527 NA 10.743809547 3.378053772 9.932145200 7.750284917 11.650014 9.435082 7.999395 12.687785 10.013506 12.086746 3.178747 7.120823 9.299605 11.183535 13.145221 11.137027 8.780307 8.451761 2.671792 7.237636 10.754772 10.370761501 5.244034582 10.264239788 9.804316268 8.960102454 9.473479081 2.883288450 4.205212634 9.432984036 9.232819502 0.008773707 10.559885052 8.547976461 10.968819622 9.221516797 8.511318199 9.509991491 8.292677776 3.378053772 10.050933021 10.322834454 11.828065419 9.002227975 10.492969250 9.610588418 -1.576045406 9.356704832 6.211757887 7.092740230 9.791270028 6.527142293 10.121257255 9.215018197 8.034879828 15.790587225 10.043158146 10.904140544 12.388015563 11.350707128 9.309551613 1.745796658 TCGA-AR-A1AI 47 0 NA 1881 breast stage iia t2 n0 m0 2-10-2014 female 2005 NA NA medullary carcinoma yes 0 white not hispanic or latino 96.50.0 4 4 4 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.318231e-06 3.469029e-07 11.81993341 0.44519698 7.24606505 11.16348439 -0.55490899 9.70667300 NA 9.26534453 11.13210375 7.96676614 9.61383771 8.81039458 9.13603652 9.62009132 7.28751570 9.44305066 10.33124324 10.83183648 8.27647294 7.32168282 10.20588560 11.38547919 13.81989946 10.23061805 9.20088782 10.81394485 7.47030502 10.73316357 -1.55469706 2.96873590 9.00740801 11.81830264 12.50019379 5.04508033 12.11427211 11.88408739 10.89379820 6.61007253 2.69309661 7.85667638 10.10783391 11.10516150 5.27805539 5.81148901 -1.55469706 11.46110327 10.38951164 9.27647294 9.15587747 10.49126648 6.85455675 5.54319890 0.44519698 14.79481814 10.57830777 1.44514400 7.94102060 NA 6.99975427 10.10203737 10.76286086 9.66312327 9.99591240 10.65735793 10.16026966 -0.55490899 12.20474175 11.37386905 3.87142970 8.00167166 -0.55490899 8.61759309 15.12810534 8.43157658 11.92721722 11.72303416 10.83775138 -0.55490899 0.03012416 8.42101370 9.83102802 10.02023202 NA 3.03012416 7.48408495 10.09442175 8.50450996 9.54845339 9.20005309 6.07452256 8.81585302 11.78640642 3.90459970 13.15532630 2.61508666 6.80271797 10.71925250 11.94014615 13.11294244 6.40516700 9.62445279 11.20588554 10.71385087 11.80560121 4.37590131 7.97264269 12.22046724 8.33086177 1.25253677 10.46579840 10.19209970 -0.55490899 3.45414957 10.15769266 11.52548352 10.12816024 9.85402605 14.69991744 10.29222292 9.75804861 7.39060922 3.35205226 12.93118353 5.36402957 13.60979760 12.49399301 10.24687394 9.73172344 8.42244537 10.42400122 0.2925900 0.8397800 0.2557100 -0.2955800 0.2972100 0.0424230 1.4572000 -0.0159050 0.2897500 0.2488400 0.2488400 0.2632300 0.6448400 0.1808400 0.8291700 -0.3505500 -0.3061800 0.4854100 -0.2763300 -0.2961700 -0.2851500 -0.3123900 -0.1959000 -0.1615600 -0.1598400 -0.0330210 1.0835000 -0.0358820 0.2469700 0.6724800 0.2925900 0.8137300 0.3207300 -0.6719800 -0.0160560 -0.5910900 -0.5643700 -0.0159050 0.2791300 0.2648000 -0.0083262 0.4193900 0.1876500 -0.3074700 -0.2921100 -0.3032400 -0.3032400 -0.5888400 0.1770300 -0.3123900 -0.2931000 0.0205970 -0.2872900 -0.3525000 -0.5595900 -0.3043000 -0.2981800 -0.0139780 -0.1959000 -0.1615600 -0.0487730 -0.0305660 -0.0358820 0.6459400 -0.0091544 -0.0885660 0.645 0.220 0.000 -0.259 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 0.645 0.220 0.000 -0.259 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 9.36029799 11.94849445 -0.55490899 7.51662823 3.93220294 12.32580140 1.44514400 4.74894420 9.19754624 7.28751570 2.61508666 8.43526938 5.38767961 10.87169244 9.11316419 3.76709329 6.35205579 11.65019515 7.15597180 9.09262396 8.08611552 7.40806135 9.70432041 2.90459970 8.01881274 10.16026966 -0.55490899 NA 9.34754076 0.03012416 12.28249787 13.55833800 6.91277080 9.92140553 10.89843625 9.60440626 5.32780950 2.76710388 0.44519698 2.83747908 8.90254636 7.76934595 7.83318295 1.25253677 8.38016838 5.70255227 9.93099496 6.38180421 9.72361504 4.25252163 10.83183648 3.08902350 5.55368919 9.94186955 6.72658603 8.38768004 8.91175179 8.64361055 10.34301112 5.64483689 13.03106705 0.76706150 10.44551774 -1.55469706 9.57830777 2.83747908 8.31398814 6.60503646 8.446574 9.977521 7.964802 12.114272 9.538583 10.693686 5.811489 6.711952 9.174277 12.202972 13.396678 11.808068 9.831028 7.582157 1.767104 7.707260 10.729122 11.171597 6.500448 9.608815 8.598718 9.490243 9.639559 8.096217 5.748947 10.230618 9.557605 NA 8.569287 9.702365 13.317889 11.057573 5.912772 7.312445 9.254934 9.246874 9.663123 9.722453 12.368122 9.209208 10.730279 9.447277 NA 9.195002 7.200053 9.666149 8.504510 4.399363 10.460232 8.815853 8.365667 14.109973 11.658118 10.198382 13.810907 11.745375 9.468920 4.767093 TCGA-AR-A1AJ 83 0 NA 1605 breast stage i t1 n0 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 96.50.0 4 4 2 5 3 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.449823e-07 5.562279e-08 12.0508061 8.8916251 5.7792781 10.4501081 0.6295665 10.3399061 NA 9.7096815 11.9242945 9.2643413 9.6118109 7.8218231 8.4906171 10.1865152 8.5749742 9.9247251 9.2625255 10.5949538 8.5735101 10.3827469 10.2437799 10.4952634 12.9031073 9.9654787 9.3910814 10.8094393 9.0473827 10.3927425 -1.3703403 2.7169909 10.1604242 10.9327401 12.1442442 8.0599825 10.8331841 11.0742863 10.1826795 5.8193540 2.0889557 5.7792781 9.1183745 6.7639559 8.6983084 3.8774596 NA 11.0118840 10.9826770 9.3944018 9.1425965 10.5446626 8.4843984 6.0807408 0.6295665 15.5042154 11.1869939 2.8774498 9.2433197 0.6295665 5.3160299 10.2294430 9.9804694 9.5469022 10.8741913 9.8875073 10.0325422 1.9514759 11.8318071 10.0357352 3.7994604 8.6942729 0.9514386 7.1725615 14.2211694 8.6059080 11.3674113 10.8408102 11.1946323 1.7994604 NA 8.2787863 9.7894016 10.9635240 NA 4.1213802 8.3160308 10.7206349 10.9865323 5.3299703 8.6379587 5.8389845 9.9062363 11.9995364 3.3844229 13.5946380 3.7588148 7.5273753 11.4931357 12.7323261 13.1093736 6.2442401 9.5587886 11.3046051 11.0144461 11.7601007 5.3977140 7.8389833 11.5104529 8.0724735 -0.3705268 10.9409947 9.5632209 3.2733816 2.3221878 9.6442482 11.8207437 10.0828008 9.6650166 15.0980588 10.1343492 9.7003220 7.0515951 3.2733816 11.9381536 8.1802772 12.6596800 12.3032809 10.5386733 9.5152265 8.5513710 10.6921194 -0.00360110 0.48165000 0.49003000 -0.00010071 0.13806000 0.00000000 -0.10710000 0.07038600 0.06345800 0.61661000 1.09530000 0.10731000 0.26687000 1.15320000 -0.06826100 -0.06826100 -0.06826100 -0.09538400 -0.12953000 -0.16485000 -0.16485000 -0.15579000 -0.14768000 -0.14528000 -0.14528000 2.00420000 2.01830000 -0.18471000 -0.03231400 -0.00360110 -0.00360110 0.04722700 -0.00010071 0.00000000 0.00000000 -0.10710000 -0.10710000 0.07038600 0.06345800 0.06345800 0.07215900 0.14087000 -0.32935000 -0.00276090 -0.00276090 -0.00276090 0.12152000 -0.16967000 -0.17151000 -0.06826100 -0.06826100 -0.12953000 -0.12953000 -0.12953000 -0.16485000 -0.16485000 -0.15579000 0.03538300 -0.14768000 -0.14528000 0.13376000 -0.13147000 -0.18471000 -0.03231400 0.35484000 -0.17424000 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.359 -0.153 0.000 0.000 0.123 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.216 0.107 0.000 0.122 0.000 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.359 -0.153 0.000 0.000 0.123 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.216 0.107 0.000 0.122 0.000 10.3480631 12.5092091 0.6295665 9.3819108 5.1373232 11.2287457 5.5953157 3.5837237 9.1974863 8.5837267 NA 8.5589808 6.7275625 11.1343492 9.1917726 2.6295198 10.8159540 9.3256284 8.1233858 8.6518980 8.9543071 7.2368609 11.3118665 5.1686902 8.4043173 10.0325422 3.7169909 NA 10.2112016 2.2144979 12.3196373 12.1984364 7.7562347 10.0505431 11.8147154 8.7445739 4.3574535 3.0218528 -1.3703403 -1.3703403 7.8069498 7.6379587 6.4239462 6.5895328 8.9967811 8.3860867 10.0094501 5.3977140 9.3098897 3.3299703 12.1675978 4.8193565 5.0557943 9.7470110 6.5385832 8.2895260 10.4933293 10.1706268 8.0578905 0.6295665 13.1164281 1.4369081 10.7344565 NA 8.6601974 4.1841216 7.8679348 8.3282346 13.0608959 10.6358563 8.5676394 10.8331841 9.9793643 11.3166871 3.8774596 8.7575244 9.0930546 10.9166654 13.6902683 12.0468553 9.7894016 7.9218516 0.2144979 7.2841662 11.9255860 11.684304 4.357453 8.720966 8.973826 9.410070 10.458793 8.859551 7.309011 9.965479 9.518274 NA 7.872704 9.759451 12.609045 12.381283 7.745874 7.654670 10.610741 9.325628 9.546902 10.423946 11.948355 11.957223 11.309450 9.063116 6.690226 9.476243 7.566168 9.140294 10.986532 7.113346 11.751933 9.906236 8.247916 13.545830 10.519794 10.228048 12.965967 10.809439 10.160424 4.629531 TCGA-AR-A1AK 70 0 NA 1559 breast stage i t1 n0 m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 96.50.0 5 2 1 2 2 2 3 3 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.251513e-06 2.781139e-07 10.8702769 8.8450685 7.3618727 11.3389324 0.9833858 10.3509942 0.6614760 10.1879323 11.6208916 11.3106891 10.1492730 7.9468349 8.8301051 9.7058271 7.5379499 9.2435748 9.8660042 9.5862455 8.1391911 4.8111781 10.5302555 10.5371823 12.5706698 11.7078749 8.9788457 10.4570669 7.2761430 9.7738139 0.6614760 2.8313503 9.0156824 13.2982275 11.6633689 9.4542232 12.9616425 13.1847499 9.5825300 6.3052884 4.1208661 7.7699575 8.5622997 9.4935319 8.5256191 12.3218746 2.0877004 10.6540173 13.2191958 5.5317963 9.9948623 10.4179893 6.9743159 4.4943260 -0.3386152 14.1904855 11.1038582 1.4687918 8.3232111 1.2464081 5.4028995 9.8848314 10.2917001 10.2102549 11.1170171 9.7823188 10.2364994 3.8708874 11.2777520 10.2599508 7.6614332 8.3549198 8.4687877 10.6934787 14.8234702 8.7219939 11.6446047 11.8044973 8.7126419 1.8313503 2.4687918 9.3978348 9.4279619 12.2920414 0.9833858 4.1208661 6.9375574 10.4142317 10.8073651 4.9652117 7.3088914 6.3549193 10.3756785 11.5283255 2.7488905 13.4950643 6.1532865 8.0537505 11.9143940 11.9920698 12.8634802 8.7738724 10.1682364 10.7034343 10.6127941 11.5986229 4.9652117 8.7855541 11.3685764 10.7640649 -1.3386152 10.5884701 9.5914311 1.9833494 3.8393550 9.5802963 10.6145381 9.7574892 9.7829664 15.1087422 10.7268491 10.2270111 8.5577654 3.3618666 15.0537672 8.3549198 13.2260588 12.4648578 9.8206736 9.6236059 7.8757518 10.6115296 -0.0271240 0.7710600 0.7910800 -0.0109310 -0.0080164 0.0094491 0.4537700 -0.0113350 -0.0048461 -0.4421000 -0.4421000 0.8069700 0.7596000 -0.0011087 0.0016219 3.6569000 -0.4252400 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0103700 -0.0569810 0.7581500 0.7581500 0.6377400 -0.0619580 -0.0619580 0.7974300 -0.0271240 -0.0271240 0.0012481 -0.0064664 -0.0050410 -0.0034627 0.3942900 0.3942900 -0.0113350 -0.0048461 -0.0174440 -0.0191770 -0.0013858 -0.4421000 -0.0215100 -0.0215100 -0.0215100 -0.0682070 -0.0011087 -0.4547900 0.0016219 -0.4424500 0.3416100 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0103700 -0.4497500 -0.0569810 0.7581500 0.0123760 -0.5301200 -0.0619580 -0.0246610 0.0070826 -0.0381700 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 9.7508835 12.0980144 6.0960615 10.1717026 4.0877004 10.4542233 2.1208496 2.1208496 8.4079471 7.8561896 -1.3386152 8.3332922 4.2463929 10.0834977 10.0178849 5.5921700 9.4663706 9.2834848 9.1085161 10.7777769 9.5421644 8.3479336 11.3904164 4.7488959 8.5743222 10.2364994 5.5562516 -1.3386152 11.0032298 3.8313605 12.1982873 11.9384297 8.5240703 9.7024075 11.0740028 9.0101611 5.5317963 1.2464081 0.2463473 8.0771746 9.4623329 8.5100560 8.7607808 5.1043744 7.3135969 6.1290377 10.1285290 7.9560537 10.0467561 NA 11.7915208 3.5194161 5.8213046 9.0999753 6.1617567 4.2160202 10.4481110 9.2889669 6.0189857 -1.3386152 13.3466745 0.2463473 10.3395929 NA 7.8388522 6.1208641 7.6185353 8.1512809 14.828846 4.519416 8.333858 12.961642 9.949145 10.520579 12.321875 12.362739 8.554735 11.211218 13.253715 11.637639 9.427962 8.392752 1.983349 7.895053 11.296924 11.227487 7.389353 8.460715 9.092930 9.271535 10.173462 8.339153 6.672660 11.707875 6.785554 4.831360 5.870887 7.253666 10.712302 10.305289 8.394448 9.054824 13.039321 6.487981 10.210255 10.841653 11.493730 10.561168 10.838541 8.767342 3.053754 8.991039 7.458803 5.727523 10.807365 4.705829 11.027905 10.375679 7.279819 13.178303 10.404163 9.756170 13.156601 9.617809 9.788137 3.053754 TCGA-AR-A1AL 60 0 NA 1485 breast stage iiia t3 n1 m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma no 3 white not hispanic or latino 96.50.0 8 2 2 2 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.39057e-07 10.97987623 9.99417054 8.23521343 10.93094301 1.93753272 11.01256623 0.35253256 10.31329631 11.99157184 8.39559754 9.77621159 8.09066239 8.89753480 9.38047643 7.92052615 9.45847880 10.50041130 10.05820270 8.47539825 4.92242623 10.74435092 10.73330197 12.02045803 10.64085967 10.00002874 10.57385534 5.15992380 10.97049463 -0.64746744 3.15991976 9.13638700 13.82934820 12.52562282 6.40241863 12.74468649 12.97970520 9.15508663 5.80378241 2.67450585 7.11744155 8.99552466 9.54671160 8.31691143 12.30503862 4.13393336 10.56719309 13.05241389 5.95989995 9.37840194 10.59514902 7.57657202 4.63797534 NA 12.10284500 11.34123732 3.52249522 8.05992953 2.35256080 4.87613381 10.41394150 10.80403903 10.59007912 12.87619357 10.54301238 10.03512611 3.30677261 12.00910695 10.07921422 6.74058762 8.16314194 10.45520226 10.48217539 15.08882693 9.42595542 11.92858222 11.56065225 8.77673667 0.67446065 -1.64746744 7.77673634 9.31835458 12.43538469 -0.64746744 4.05300704 6.97462223 10.05214279 11.16655189 10.17035349 6.22908797 4.23521391 10.75771185 12.09771942 -0.64746744 13.40590235 5.72761011 8.02322652 12.48346262 11.72760981 13.15387454 7.83839969 10.14210399 11.05863463 10.90065771 11.70019173 5.55224180 8.05474322 11.98249610 11.16855398 -0.06250494 10.28293805 9.20587998 0.93757038 3.88831464 10.13311010 10.61260776 10.48731751 9.04256828 14.89484655 10.35749306 9.77253051 9.39080352 3.15991976 15.47150129 10.63739443 12.90679945 12.79116731 10.18031000 9.43471933 8.62636612 10.56113698 -0.41014000 0.79510000 0.78138000 0.00000000 -0.00360630 -0.00160350 0.00152550 -0.00207840 -0.00207840 -0.00277070 -0.00277070 -0.00277070 0.00208050 0.00208050 0.00402430 0.00402430 0.00233120 -0.00110870 -0.00110870 -0.00083160 -0.00249380 0.00180300 -0.00539920 -0.00617870 -0.00617870 -0.01202400 -0.01202400 -0.01202400 0.00208050 -0.00290910 0.00499690 0.00583090 0.00000000 -0.00160350 -0.00160350 0.00152550 -0.00249380 -0.00207840 -0.00207840 -0.00207840 0.00208050 -0.00193990 -0.00277070 -0.00235530 -0.00235530 -0.00235530 -0.00235530 0.00208050 0.00208050 0.00402430 0.00233120 -0.00110870 -0.00110870 -0.00110870 0.00088926 -0.43344000 0.00180300 -0.45133000 -0.00539920 -0.00617870 0.00013863 -0.01202400 -0.01202400 0.00208050 -0.00345960 0.00346870 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2691964 12.9040984 7.3355636 10.0573386 3.5798439 10.0745240 2.9375327 1.5225078 8.2906797 8.2654599 NA 8.6181737 3.4818543 9.8941510 9.5479425 0.9375704 10.3309233 10.0425683 10.9114694 8.8150726 9.7388639 8.6134900 11.2308129 3.5224952 9.7095724 10.0351261 7.0285272 NA 10.0620850 5.3067653 12.7462289 11.5674965 8.9412851 10.3309233 7.9801042 8.9337709 5.0249978 1.6745058 1.8120053 4.6924216 8.5921688 8.7470332 10.0787885 5.9524827 7.4487317 4.2352139 10.2432147 7.2167565 9.7243471 0.6744607 11.1207547 3.3525749 5.3969643 9.6821536 5.0874162 4.3969678 9.4373788 7.9356530 6.6004972 -0.6474674 13.7865143 2.3525608 10.1157828 NA 8.9109910 6.7319489 8.1024398 8.7156099 12.063374 4.418662 8.588585 12.744686 10.438043 10.800687 12.305039 12.788436 9.450319 11.198060 13.997975 11.660625 9.318355 6.970956 NA 7.950623 11.653209 11.590378 8.047798 8.814050 8.862345 8.680123 10.178547 6.856396 7.156701 10.640860 4.259461 2.159920 7.182293 6.382797 11.688240 10.325550 8.198060 7.842418 12.707715 6.391489 10.590079 10.102440 11.445658 9.724891 10.539613 9.656922 NA 9.357030 8.543062 6.864324 11.166552 7.753450 10.983065 10.757712 7.785112 14.145564 10.045622 10.437379 13.296779 10.548250 10.123647 3.396968 TCGA-AR-A1AM 52 0 NA 1903 breast stage ii t1 n1 m0 2-7-2014 female 2006 NA yes mixed histology (please specify) yes 1 white not hispanic or latino 227.29.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.112456e-07 10.6549495 8.4003654 7.1964664 11.5072269 0.4994760 10.2890324 0.8214653 9.4493255 11.8833380 13.2487397 9.7186673 7.9299513 8.6517836 9.7331184 8.2824968 9.2333616 11.5709611 9.5093273 7.5816480 2.3068455 11.3844324 10.2485301 12.8044204 11.5327497 9.0444632 10.2552209 6.2808580 9.5513534 NA 3.4063870 7.9152406 12.9064345 12.8177591 9.4324517 13.8146483 13.1840830 9.4398124 7.3574799 4.7662877 7.2906612 8.6618899 8.2593869 8.4257945 12.8729757 3.9589262 10.1059039 14.3418491 7.4361368 9.6230317 10.8276126 8.0712516 6.8701859 NA 14.6422945 11.5444085 3.9589262 8.4138839 -1.5006261 4.6492476 10.1086775 9.9220891 9.5363591 11.2697497 9.8044205 9.8696412 3.3068601 11.2953355 10.7656997 8.3790820 8.1964664 9.3489038 10.9123332 14.4027922 8.1344186 10.9888450 10.6194126 7.7545275 2.1999393 3.9589262 9.0132264 8.3775498 11.4676255 -1.5006261 4.0540844 7.6210321 9.6099821 10.3351544 6.5329216 6.0151987 4.8214245 10.4052618 11.6800295 2.4995015 13.3285277 5.2274176 7.4063896 11.8309756 12.5806493 12.7809942 8.7639413 10.5541031 10.8600715 10.6608700 10.9971011 4.9752312 9.1938567 11.5691163 11.8822579 0.4994760 10.3172819 8.9650651 2.5869568 4.4541627 9.0560047 10.3851951 9.2103051 8.9382905 14.7356438 10.2489493 9.4041334 8.8669135 4.0230601 15.2993495 11.5128214 13.6863868 12.5787335 10.7104745 10.2252911 8.3196775 10.7629587 0.01078100 0.01078100 0.42714000 -0.01291100 -0.01291100 -0.15559000 0.44826000 0.00146480 0.00146480 0.02014100 0.02014100 -0.00029591 -0.00974090 -0.00452050 0.01008500 0.01008500 0.01008500 0.00354690 0.00021666 0.00104870 -0.11612000 0.00674360 -0.31569000 0.00493610 0.00493610 0.00521410 0.00521410 0.00521410 0.02280400 0.01036300 0.01078100 -0.15116000 -0.01291100 -0.15559000 0.27010000 0.00000000 0.00000000 0.00146480 0.00146480 -0.00245100 -0.00957260 -0.00019923 -0.43338000 0.02182200 0.02182200 0.02182200 0.02182200 -0.43999000 0.06931900 0.01008500 -0.43663000 0.00021666 0.00021666 0.00021666 0.00104870 -0.11612000 0.00674360 -0.43175000 -0.31569000 0.00493610 0.01944100 0.00521410 0.00521410 0.00841340 0.00340800 -0.43218000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 9.1352168 12.9220892 7.8658211 10.4213397 4.4302384 11.5786502 3.8214245 0.4994760 8.9953536 8.7150319 -1.5006261 7.5638910 3.3574816 9.9681227 9.9888450 2.0844725 9.1397437 9.4796384 11.1802978 11.2537599 9.8851886 7.8055607 10.4460396 3.4063870 10.5187420 9.8696412 6.1215501 NA 10.6467037 4.1433526 12.2454881 12.3516381 7.6967151 10.1789789 9.2759317 9.5030167 5.9913518 2.8214245 0.8214653 4.8745363 9.3068537 9.6262033 10.4973838 4.6080226 8.7216416 6.6744239 10.2154608 5.5655880 9.5743091 -1.5006261 11.4022507 2.8214245 4.8214245 9.6251253 6.5984262 6.0072942 9.2223064 7.9893468 8.7126030 1.8214245 13.7357372 -0.5004220 10.3100704 -0.5004220 7.5411578 5.9833152 7.9046400 9.1586026 13.259189 4.747425 8.713818 13.814648 10.481779 10.572301 12.872976 12.568781 9.204267 10.578984 12.614624 9.964555 8.377550 8.491021 NA 7.351248 11.409767 11.637931 6.287402 9.457326 9.275109 7.073145 10.804189 7.578983 7.132494 11.532750 8.061741 3.669424 7.733118 6.781243 11.646067 10.458776 8.714826 9.311676 10.788077 6.766285 9.536359 10.326444 11.202970 10.029905 10.604425 8.145157 NA 9.784936 7.242381 7.664405 10.335154 6.357480 11.001542 10.405262 7.473914 13.932139 10.209875 10.043980 12.840253 11.408454 9.964044 2.499502 TCGA-AR-A1AN 46 0 NA 1330 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white hispanic or latino 96.50.0 2 2 2 1 NA NA 1 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.615481e-07 1.112456e-07 10.84633723 9.67512274 6.04736825 11.67695480 0.05491792 11.08671903 0.05491792 9.34184569 12.04583422 10.42377322 9.54408194 7.38582013 8.59017832 10.40768213 4.96179463 8.58237987 10.49715536 10.13038214 7.57322833 3.37683213 9.95274853 10.31189791 12.90600134 11.18525902 9.69394217 10.41940247 4.59922256 10.59728683 NA -0.53011402 9.10384379 12.17665236 12.91327259 7.61459869 11.94199664 13.00746225 10.18804517 7.14942095 3.67939002 7.12457628 7.86868430 9.33644675 8.18074710 13.29559497 0.05491792 10.96229444 12.91954055 4.94567324 9.27709418 10.42667968 9.84280555 7.11379633 NA 13.66102439 9.17643648 3.22482749 7.62222537 0.05491792 4.27729298 9.86814981 10.90769257 9.86064689 11.82735505 10.91236567 9.48256497 1.27727066 11.72201456 10.08832595 5.69876022 6.76456113 0.46999014 11.63657437 14.94600632 8.63839935 11.19807358 10.68152464 8.67695493 1.92937441 1.92937441 7.45862480 10.09382199 11.66761795 0.79185574 6.56797280 7.21477469 9.65295555 11.62744533 7.78282331 7.23481168 5.15644111 10.17945519 11.69016764 0.46999014 13.85256452 3.75534695 7.15293480 13.72182968 12.57650343 12.55416756 8.05490273 10.76828955 11.05419838 10.54797116 11.62712952 4.75534161 8.81645411 12.95091999 10.82225987 1.92937441 10.40878498 9.65295555 -0.53011402 2.47713330 9.60564971 9.43355915 11.52488393 9.49577210 14.89034487 10.40215521 9.94466038 8.28372180 2.27730042 15.19607881 8.74140361 12.53687057 11.71445298 9.71786797 9.98957672 8.36324205 10.50958610 -0.00968060 0.44139000 0.92837000 0.01181800 0.93650000 1.23510000 -0.00609040 0.01642500 -0.01161100 -0.41838000 0.00458000 0.48285000 -0.43496000 0.00013863 0.00000000 0.46724000 0.03340800 -0.00970170 0.00041593 1.46920000 -0.00263220 0.01866300 -0.44921000 -0.44921000 -0.44921000 0.02820000 0.02820000 0.02567100 0.46741000 0.05266800 -0.00968060 -0.46259000 0.01181800 -0.48655000 -0.49423000 -0.00609040 -0.48544000 0.01642500 -0.01161100 0.00291330 0.00083195 0.01279500 -0.50982000 -0.02425100 0.01084200 0.01084200 0.01084200 0.00013863 0.05096100 0.00000000 0.00360760 0.01530800 0.00041593 0.00041593 -0.01133500 0.01852300 -0.48565000 -0.48134000 -0.44921000 -0.44921000 -0.01943800 0.07484000 0.02567100 0.02454800 -0.03585700 -0.07200700 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.05114095 14.50316990 4.84497812 10.16124780 3.29877560 10.26841229 1.46993806 0.79185574 8.67328858 8.09016007 NA 8.77071641 2.63985727 9.89358170 9.02452940 0.79185574 9.14589751 9.43644588 11.35449266 10.20253196 9.22799708 8.13349880 11.43950689 3.22482749 9.20125942 9.48256497 8.77486216 NA 10.44543021 1.92937441 13.56092125 12.78968316 8.67083927 9.73965169 7.98957672 9.70595475 3.79186615 1.27727066 -1.52990571 2.46993806 8.57191605 9.45079411 11.81479116 5.92115066 6.64875447 5.09929520 9.80253656 5.23812573 8.93244273 -0.53011402 12.53594558 3.75534695 2.27730042 10.09731016 6.80251378 3.63986885 9.41684671 8.42849334 6.25130061 0.05491792 13.43093792 0.79185574 10.49265507 -0.53011402 7.52793203 5.32792085 7.99154112 8.39326817 13.3182495 5.6891090 10.1227854 11.9419966 11.5793402 11.1740603 13.2955950 13.2918639 9.0947359 10.9853940 13.2252976 11.0022964 10.0938220 9.3602047 0.7918557 7.0052158 11.3696750 11.4491870 7.3798332 9.1029357 9.4139205 7.7343831 10.6731661 6.4006780 8.2381248 11.1852590 4.4472221 0.4699901 6.4642942 6.8730380 10.8506721 10.4540029 8.6927354 9.1388255 13.3455939 5.5574040 9.8606469 10.4818665 10.9535044 10.0684583 10.6699195 9.5494252 1.7918557 10.0582663 6.9456744 5.1564411 11.6274453 8.3962366 10.9116501 10.1794552 7.1065650 14.7173856 10.8827749 10.6996606 12.2435949 10.5574033 9.8142364 2.6398573 TCGA-AR-A1AO 47 0 NA 1325 breast stage iia t1 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 96.50.0 2 2 2 5 1 3 2 6 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.39057e-07 8.343418e-08 11.63791916 8.73400029 6.11524970 10.95400520 -0.60581515 10.14276225 -1.60603472 9.79716217 11.38832673 8.46962920 9.14401959 7.82251029 8.99499232 9.88449963 6.31301361 9.85204395 9.12207061 10.32525699 8.73622467 6.47096629 9.99173724 10.92455645 12.99534057 10.35197775 9.67781723 10.52857650 7.22387332 10.41269802 -0.02092584 3.97911076 10.06657548 12.66064389 12.62100709 8.76265643 11.54008226 11.07098872 10.85076122 5.62296841 1.85359651 6.65153825 8.93814844 8.66678002 7.78861263 10.42998025 0.39418485 12.17847825 10.83294198 7.42757349 9.51114383 10.14862008 8.32044632 5.43854570 -0.02092584 14.60230884 10.86150096 4.32488979 9.15570143 NA 4.78646568 9.94921858 10.02578199 9.50005869 10.68790918 9.58150227 10.16109307 3.25212799 11.11524931 10.13350881 5.99406374 8.19989413 6.91771220 8.88600318 14.81603416 7.51244261 11.16502047 10.51373973 9.21353101 2.30103153 0.39418485 8.14736674 9.79289390 12.17161095 -0.60581515 3.30104617 7.08065020 9.91034262 11.15570136 8.32636477 8.67376063 7.23020013 10.57343721 11.65301056 -1.60603472 13.53745362 4.06657144 7.03439512 11.69921434 12.33464726 12.63925713 6.92942531 10.04295713 10.75060207 10.42898695 11.22565530 5.09459079 8.36425593 12.08086951 9.47629925 -0.60581515 10.70986579 9.20230997 1.56408545 3.65040844 9.97535075 10.46225666 10.08720146 8.90787760 15.07862483 10.17714829 9.75883198 6.39415054 3.48160894 13.77410378 8.40117733 13.01328111 12.64422644 9.70135100 9.59075227 8.11353903 9.64293167 0.0451410 0.0451410 0.0451410 0.0231450 0.1629500 -0.0076101 -0.0238400 -0.0143660 -0.0143660 -0.0220580 -0.0220580 0.0245480 0.0018030 0.0018030 0.0259520 0.0259520 0.0259520 -0.0280810 -0.0280810 -0.0751500 -0.0289010 -0.0062286 -0.0372180 -0.0372180 -0.0372180 -0.0062286 -0.0062286 -0.0062286 0.0793030 0.0188570 0.0451410 0.0000000 0.0231450 -0.0823940 -0.0076101 -0.0238400 -0.0238400 -0.0143660 -0.0143660 -0.0143660 0.0221640 0.0221640 -0.0220580 0.0237060 0.0237060 0.0237060 0.0237060 0.0018030 0.0018030 0.0021895 0.0259520 -0.0280810 -0.0700010 -0.0700010 -0.0102970 -0.0289010 -0.0062286 0.0217440 -0.0372180 -0.0372180 -0.0760090 -0.0062286 -0.0062286 0.0104920 0.0435820 0.0081959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.1502894 13.2148277 3.9177086 10.0906830 4.8860038 10.0060971 4.3248898 2.7864709 8.9706345 9.0106990 0.7160690 8.1459622 6.1423440 10.8133203 9.1023718 2.9177182 10.3874424 9.4158241 9.2466796 9.7278645 9.0231971 7.5815019 11.0152862 5.2683333 7.9563924 10.1610931 6.2706672 NA 11.1152493 3.1490317 13.1438101 12.4035414 8.9157506 10.3842541 10.6702745 9.4541705 3.9177086 4.3483457 -0.6058152 NA 8.6313601 10.0152862 8.6133187 5.5839733 8.7560829 5.7428793 10.1101121 6.3885030 9.6029941 0.3941848 11.2057255 4.6979295 4.4816154 9.4777558 6.7297635 6.4869074 9.8764539 10.1002144 8.0307747 8.5987214 13.6791188 2.4816089 10.8507612 NA 9.1615071 6.1220701 8.5260070 9.3785686 11.4819511 7.4303237 8.5876755 11.5400823 10.1824607 10.7759635 10.4299803 10.5381710 9.3025427 10.9142777 13.3074136 11.2197053 9.7928939 8.2505756 -0.6058152 7.4656121 10.9963850 11.525525 5.554021 9.218305 8.367130 7.861756 10.327136 8.466953 7.773528 10.351978 6.795029 5.348346 7.828778 7.957842 11.576700 11.091335 8.326365 8.619358 10.469295 7.886003 9.500059 10.538490 10.989641 10.804071 10.825125 9.392035 3.038015 9.676173 7.602628 7.745089 11.155701 7.911820 11.228599 10.573437 7.608712 14.066382 10.680708 10.940804 12.570245 10.563136 9.787541 3.094591 TCGA-AR-A1AP 80 0 NA 1216 breast stage i t1 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 5 2 1 3 3 4 1 4 3 4 1 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 7.509076e-07 2.781139e-08 11.7413624 7.6090435 8.2883613 11.6754301 -0.1524841 9.7240090 NA 9.8870966 11.8025970 8.8204719 9.3373400 7.9793492 8.4804873 10.0538960 6.0174164 9.5137161 10.1328942 8.7782293 6.9819189 5.2568823 10.3929392 9.7293708 12.2438292 11.8064072 8.5940065 10.4163982 5.7663540 10.4427309 -0.1524841 1.4324784 8.1761672 13.1486310 12.7709133 7.9844834 13.0123204 13.5205250 9.4154481 4.9135836 0.4324250 7.6929823 7.9946968 9.0086239 6.8864111 12.6974835 NA 10.4594390 14.5230081 5.2904355 10.3220194 10.8753980 7.4949508 3.4913529 -0.1524841 14.2484502 11.3540476 3.3710570 8.1119348 0.8475159 4.5199193 9.6280319 10.1654698 10.2149068 11.1495597 10.4432157 9.4722875 5.9664328 11.6181560 10.4030398 6.1512723 8.0422487 3.6023737 11.1526988 14.6415017 8.5397067 12.0949746 10.8552201 8.2462356 2.3069330 4.8016864 9.0811116 9.3483340 11.1609420 NA 5.1142796 8.1095867 8.9780626 10.8764341 5.5617385 5.9664328 5.4768483 10.4102114 11.5260922 1.1694120 13.5653291 5.6288523 7.3272724 12.8182271 13.4363238 12.9040451 8.4059128 9.7863365 10.4305749 9.5961965 11.4663364 5.2050445 9.2225315 12.1551198 10.4446134 -1.1526444 11.0720968 9.5304867 0.8475159 2.7553363 9.3622062 8.9229712 10.2159985 9.4667949 15.2258038 10.6863021 10.2344323 7.9269767 2.8474959 15.0940471 8.1626416 12.6287493 12.2403461 9.7737880 9.4125942 7.7603813 10.6307482 -0.1881000 0.3892000 0.4041100 0.0488300 0.0260920 -0.0329510 -0.0146410 -0.5953600 0.0211830 -0.5941900 0.0597940 0.6421300 0.0570680 0.0485460 0.0345360 2.4837000 2.8814000 0.0549450 0.0377800 0.0000000 0.6220600 0.0716780 0.0814660 -0.5472400 0.0793030 -0.5396600 0.0803120 0.0803120 0.6995100 -0.1517000 -0.1881000 -0.0013858 0.0358060 0.0079175 -0.0351270 -0.0232920 -0.0268050 -0.5953600 0.0211830 0.0491140 0.0918800 0.0270760 -0.5941900 -0.5801600 -0.5801600 -0.5685100 -0.5603700 0.0485460 0.0485460 0.0649400 -0.5884300 0.0549450 -0.5838200 0.0879690 0.0080567 -0.5693200 0.0690950 -0.5629600 0.0910100 -0.5472400 -0.5758500 0.0913000 0.0803120 0.6671500 -0.2546700 -0.5632600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.152 0.237 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.152 0.237 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 8.7900066 13.0274011 8.7943983 9.5199173 4.0954181 10.4732009 2.0174231 NA 8.6819633 7.3552868 -1.1526444 7.3766490 2.6548479 10.6604715 8.8190355 2.3069330 9.0942326 9.4722875 8.7737880 10.1682927 9.4432902 7.5021277 10.3272723 2.7543745 8.5039167 9.4722875 5.3069220 NA 10.8646484 3.1694280 12.1795286 12.0775125 6.8074940 10.1649047 9.6090433 9.7671002 5.2737583 2.6548479 -0.1524841 9.9520908 8.0397849 9.4529716 7.8726318 4.5754152 7.8996252 7.8864111 10.5838940 7.1649049 9.7278408 -0.1524841 9.7163146 2.9349505 3.8016864 9.4228612 7.5872052 2.3069330 8.9832014 8.6676711 4.9349552 0.8475159 13.7681240 NA 10.4159232 NA 7.9870434 3.3069184 7.9135812 8.3272724 14.230272 6.239809 8.100158 13.012320 10.293541 10.469086 12.697484 12.051452 11.287962 11.229846 13.732378 9.579660 9.348334 8.739276 NA 7.169420 12.200639 10.759633 7.343347 9.374969 9.136358 8.248372 9.278666 7.169420 7.565168 11.806407 7.810388 2.654848 7.836177 7.130442 12.283293 9.990875 6.976775 9.711678 12.517484 5.476848 10.214907 10.492700 11.925810 9.610704 10.136935 8.664476 1.169412 8.910995 7.932300 4.095418 10.876434 7.526972 10.480487 10.410211 7.585585 13.398058 10.433863 9.536617 12.830575 11.284464 9.302819 6.355286 TCGA-AR-A1AQ 49 0 NA 1310 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 96.50.0 4 4 2 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6.952849e-07 1.668684e-07 11.84093068 2.74736591 5.71934775 11.09778999 NA 10.00837077 NA 8.52467922 11.64474083 8.29247395 9.18775092 8.06094176 8.47108745 9.85829577 7.59766748 8.09404495 9.31253608 10.54027618 8.93261753 7.65794577 10.38231135 10.12039316 11.67262989 11.41978610 10.24044636 10.26427299 7.75772735 10.02920163 4.53877404 1.04691008 8.75600482 10.97839729 13.47789622 5.57048418 12.09812998 10.72199598 9.43062525 8.82991931 4.74736054 7.75428024 8.54277614 6.97173322 9.28054066 6.68354628 1.36882421 12.98079609 11.29869932 6.27573901 9.59381556 10.91959595 5.58608016 4.82828122 -0.95315975 14.70585102 11.05844537 -0.95315975 9.32537045 7.21684575 7.79511365 9.00257089 10.77611690 9.04692099 9.70066183 9.47632781 9.57439806 7.78501363 10.76374054 10.33866731 4.92956378 7.97173379 4.17620308 8.66714100 14.21017761 8.19399887 10.74258431 10.14692628 10.72508101 1.85427498 -0.95315975 8.94173870 8.86709986 11.05779879 1.36882421 4.60151231 8.13172940 11.22838395 11.06581664 4.85427498 7.75082488 7.22184712 9.04410063 11.86949186 4.25637666 13.30695847 4.17620308 7.56262099 11.18423243 12.11031613 12.96634308 6.47318620 11.41896985 11.56335979 11.15689858 11.06581664 4.40447401 8.31838418 11.75233745 5.77484239 0.63189586 10.57878978 10.16066321 0.04697991 4.17661798 8.89084215 9.91188089 10.71978829 9.31253608 14.82013754 10.79971979 9.36659324 5.23674516 1.04691008 13.60133003 9.14758349 12.63961165 13.55242250 9.70245184 9.91110717 7.86070214 10.15681044 0.3692900 0.4764200 0.0499140 -0.3189600 0.0593620 -0.3617100 -0.4060300 -0.3499500 -0.3367700 0.3638800 0.3392100 0.3365100 1.7037000 3.0464000 0.0085532 0.0244870 0.0000000 0.2207800 -0.3585600 0.0317980 -0.3782400 -0.3748700 -0.3589100 -0.3589100 -0.3589100 0.0860250 0.0860250 -0.3848600 0.0439450 -0.0137740 0.3692900 0.0201420 -0.3072600 -0.3606100 -0.3628300 -0.3794600 -0.3794600 -0.3499500 -0.3367700 0.0595840 -0.3825100 0.0614460 -0.0914770 0.1982500 0.1982500 -0.3690500 -0.3616400 0.0674560 -0.3892200 0.0399820 0.0000000 0.2035900 -0.3585600 -0.3585600 0.0233650 -0.3782400 -0.3976600 -0.3872100 -0.3589100 -0.3589100 0.8088100 -0.3640200 0.5423400 0.0439450 0.0398410 -0.3859800 0.887 0.887 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.379 -0.379 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 0.887 0.887 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.379 -0.379 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 9.62717964 12.85618675 5.33232483 8.37335066 4.20234719 13.51050928 2.85427498 1.85427498 9.46688117 11.96466605 6.27573901 8.53476120 2.63187258 10.98245446 9.51859631 3.04692754 7.76459762 10.22993611 8.11569915 9.45099820 8.70409661 6.43923914 11.54202656 2.04691008 9.35412175 9.57439806 1.04691008 0.04697991 10.25515536 1.85427498 13.79747102 13.23697718 7.20173873 9.87426382 11.95475059 9.87426382 5.40447401 3.57048722 -0.95315975 -0.95315975 9.28293528 9.56950248 7.05254523 4.00111766 6.61776277 5.52265528 9.85427592 4.74736054 10.03915128 5.25637288 11.82602478 2.85427498 4.92956378 10.16667930 7.60212353 9.53073678 9.11569941 9.19539755 11.66530656 5.19666999 13.78400991 NA 10.80597702 NA 9.98134908 4.00111766 7.95681405 7.97173379 11.345574 9.523667 7.740408 12.098130 10.678603 11.094045 6.683546 7.201739 9.484673 11.393712 13.376998 11.488050 8.867100 8.083095 4.570481 7.439238 10.224341 10.630944 4.176203 9.487790 8.986500 8.970249 9.218098 7.811793 6.395649 11.419786 11.115028 6.705132 9.049736 9.171559 11.532750 10.407768 8.107617 9.731670 7.808473 9.697973 9.046921 10.360938 11.492195 10.396755 10.221847 8.982086 NA 9.658379 7.323046 10.641712 11.065817 6.332323 11.214653 9.044101 7.373351 14.946585 11.119054 10.973958 12.115867 11.408317 8.774841 6.069290 TCGA-AR-A1AR 50 1 524 NA breast stage iiia t1 n2 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 103.51.0 4 4 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 1.00121e-06 2.781139e-07 10.69021549 5.70460365 5.95504771 10.54240268 -2.01624935 10.65813738 NA 10.06565268 12.11383292 8.40976853 9.91534925 7.96078333 9.06963988 9.35582458 7.85694773 9.65990155 9.37796639 10.69129416 9.66825229 6.22190801 10.07791136 9.52508441 12.18516816 9.59360569 10.67873199 10.45949033 7.06831181 11.11712755 NA 2.93770220 9.97750347 11.09284466 13.07564139 7.85386843 10.59198958 10.59982276 10.45314550 5.15342840 2.23143241 6.97785689 8.54860578 5.54574602 7.76650174 5.44293686 NA 10.96970129 11.69291064 8.43265213 8.48022755 10.64505917 7.94928804 5.26890593 -0.01654119 13.83175837 9.31554019 3.89039805 8.79246789 -2.01624935 3.47535731 10.20478875 11.77639561 9.79206567 11.04132623 10.39077149 9.57549349 1.68392098 11.47860917 10.21292335 2.93770220 8.47835910 -1.01654119 7.77140627 13.86722090 8.25573676 11.09170142 11.07063499 10.98491185 0.79085543 -0.43148140 8.54955790 10.18562748 11.27092752 -2.01624935 2.30544528 7.56093272 11.08334456 10.89227156 5.10244398 8.81560265 5.68394343 10.26224345 12.23372805 0.30544528 13.97416167 2.07097316 7.22667807 11.09104768 13.52946361 13.40198223 6.04959374 9.94133127 11.44472731 11.23674403 11.79628265 5.51488602 7.46530274 11.92244001 7.41604591 2.37581793 10.09887258 10.24265847 3.23143241 2.32550155 10.05396008 9.44395966 10.47510627 9.27755011 14.71524697 9.72749660 10.50215683 6.79407530 0.56842131 11.41160208 5.81005230 13.64422386 12.78379694 10.08153577 9.59129625 8.40767013 10.16064292 1.2921000 0.9604000 0.0224440 0.0147490 0.0546600 0.4517300 -0.4527600 0.0270760 -0.0031859 2.5673000 2.1102000 0.0252500 0.6066600 -0.4313800 0.0279630 0.0279630 0.0279630 -0.4311600 -0.4412400 -0.4512500 -0.5170200 -0.4194800 -0.4128900 -0.4128900 -0.4237500 0.0928950 0.0928950 0.0928950 -0.4113500 0.0520990 0.0203430 0.0172640 0.0000000 -0.4415600 -0.5353100 -0.4527600 -0.4527600 0.0270760 -0.0031859 -0.0625110 0.3230200 -0.8781300 -0.4369100 0.0199230 0.0199230 0.0199230 0.0406090 -0.8125200 -0.4232000 0.0287630 0.0188030 -0.4311600 -0.4353500 -0.4250600 -0.4427500 0.0099392 -0.4194800 -0.4812300 -0.4128900 -0.4128900 0.0876790 0.0049969 0.0928950 -0.4122300 0.0055432 -0.4040700 0.000 0.000 0.000 0.000 -0.435 -0.435 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 -0.435 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 9.08219376 12.40280554 4.26890593 8.31665896 3.88750577 10.45034493 3.34106065 -1.01654119 8.85232632 9.23498600 0.30544528 8.82270753 2.62735002 11.42761267 9.28041980 -0.43148140 10.98279904 9.64750646 6.59452914 7.87224701 8.34942145 8.33444269 10.80487904 4.72497217 8.33885491 9.57549349 3.76486628 NA 9.73462919 2.68394343 13.35156673 12.51956874 7.70460296 10.19903673 10.19051795 9.32668946 3.40977108 2.79085543 -0.43148140 -0.43148140 7.79407530 6.91424160 7.33001783 5.29638766 5.76230363 4.19295951 9.92784965 4.07096457 8.85848492 2.15341624 11.88153814 4.09202980 3.79085543 10.71762690 6.21745951 4.17332735 9.76609239 9.34873258 4.59821631 0.30544528 13.35932373 -0.01654119 9.91940534 NA 10.68199128 3.91423921 8.53232553 7.86614700 13.582283 8.718213 9.310495 10.591990 9.964636 10.188380 5.442937 8.215925 9.712275 10.787231 14.512339 11.998657 10.185627 7.518779 -1.016541 7.153428 10.982094 11.506698 2.683943 9.527019 8.523632 9.693449 9.947967 6.731696 5.960783 9.593606 9.716943 3.027897 5.202672 8.821723 12.312739 10.984736 8.630062 7.294116 10.614226 7.271216 9.792066 10.554071 11.997611 10.735675 11.485714 10.041157 -1.016541 9.273367 7.707369 6.000311 10.892272 8.244423 11.503438 10.262243 8.317777 14.661512 10.828209 11.323215 12.581498 10.763838 10.602119 2.568470 TCGA-AR-A1AS 54 0 NA 1150 breast stage iib t2 n1 m0 4-9-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 asian NA 96.49.0 5 5 2 2 2 1 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 6.952849e-07 2.503025e-07 11.5000666 0.8487982 7.4412477 10.9947228 NA 9.7743451 -1.1513620 9.3356257 11.6856300 9.2560584 9.9081351 6.9415477 8.7405745 9.4205432 8.0435474 8.9094866 10.0606789 10.0533617 6.1975195 -0.1512018 10.3416452 9.6673727 14.2900165 10.4772361 9.2539321 10.9094865 1.6561302 11.0349049 -1.1513620 -0.1512018 6.9309395 10.6641739 12.1393855 6.2151136 12.7212731 13.1088280 9.1202537 5.8260705 3.1707263 5.3723532 7.7129768 9.1639402 7.4375049 13.0281555 0.8487982 11.7581212 13.5654493 2.8487982 9.2486027 11.5383519 7.6593623 8.3703910 -0.1512018 13.6612788 8.3061715 -1.1513620 7.3000020 NA 3.3082152 9.6927117 10.9783956 9.5750088 13.3061715 9.7541777 10.0367612 2.4337607 10.7613057 9.9915359 6.0967173 8.7299045 7.0237167 12.2614928 14.4140415 7.8638988 10.4365681 10.8145749 8.5335392 2.0187054 1.4337607 8.2581816 8.8835897 11.0612870 NA 6.3326059 7.6753389 8.1457070 10.7876350 4.5212141 4.0967173 4.7556834 10.1185017 11.8806641 0.8487982 14.7828270 6.1155764 6.6753389 12.2284397 12.1301411 12.8223983 8.4524171 10.4477736 11.0597663 10.3184324 11.0551945 4.4033768 8.9573151 12.8487906 10.3255369 1.8487982 10.2994863 8.8102403 -0.1512018 2.0187054 9.6903549 10.9135334 10.7743450 9.3625181 15.1144606 10.1964119 8.8794577 8.5335392 0.8487982 15.6349453 10.9050896 13.6624716 11.9661090 10.2581816 9.2411080 8.2792433 10.9319574 -0.00664320 1.35170000 1.38040000 0.59371000 0.57773000 -0.02767100 0.01894300 0.02146300 0.02146300 -0.71737000 0.05893700 0.04996600 -0.05394200 -0.04874800 -0.05239600 -0.05239600 -0.05239600 0.00291330 0.00291330 0.01242000 0.00000000 -0.04482200 -0.72367000 0.02020300 0.02020300 -0.05345000 -0.05345000 -0.05345000 0.06923900 0.00055459 -0.00664320 -0.12108000 0.59371000 -0.02767100 -0.02767100 0.01894300 0.01894300 0.02146300 0.02146300 0.02146300 -0.08320000 -0.06759200 -0.71737000 -0.02671400 -0.02671400 -0.02671400 -0.02671400 -0.04874800 -0.04373700 -0.05239600 -0.05239600 0.00291330 0.00291330 0.00291330 0.01242000 0.00000000 -0.04482200 0.01754400 -0.72367000 0.02020300 -0.03544800 -0.02479800 -0.05345000 0.06923900 0.02454800 0.00263570 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 7.4262195 13.2295898 3.9362516 8.7268414 NA 10.7765686 -1.1513620 -1.1513620 8.7810052 8.2107342 NA 6.9336517 2.7556781 10.2297927 9.1514296 3.3082152 4.1707183 8.8863377 9.8501989 10.3560898 9.7792840 6.8145748 10.0262101 3.2035301 9.8109636 10.0367612 2.5492256 NA 10.0299428 1.4337607 13.0767825 12.3961672 7.0582440 9.7661626 6.7067723 9.5578743 4.3082225 -0.1512018 -1.1513620 2.8487982 8.4505613 8.0800116 9.7971578 2.1707263 9.3454248 6.5212157 9.7743451 5.0386162 9.4989449 -0.1512018 10.8257127 0.4337073 1.4337607 9.7365215 7.5790232 -1.1513620 8.6235776 6.3879501 2.1707263 4.7795276 14.1036347 -1.1513620 10.5247477 NA 8.4393775 3.7556781 7.5733048 8.9832168 12.698854 6.348636 8.751166 12.721273 10.316906 11.578199 13.028155 12.387101 9.374311 10.642800 13.294969 10.434223 8.883590 9.262419 1.848798 7.124915 10.834633 11.1659205 8.0824104 9.1341927 8.8945504 9.1875270 9.7146321 6.1616741 8.5492302 10.4772361 5.4781467 -0.1512018 9.2205672 7.6610320 9.2886216 10.0594620 8.8403125 8.0967183 11.5205528 1.8487982 9.5750088 10.1479986 10.9780736 9.6879944 10.5348534 8.9256061 NA 9.5300641 6.1249154 1.6561302 10.7876350 6.6103413 10.4081677 10.1185017 7.4598152 14.2108029 10.5608876 10.5414061 13.2017306 10.5969835 9.4653395 0.4337073 TCGA-AR-A1AT 62 1 1272 NA breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 96.50.0 6 3 NA 3 1 5 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.946798e-07 10.73601871 3.05215502 6.40969811 11.29680800 -0.94786238 10.68559620 -0.94786238 9.32827123 11.27855905 7.75258671 9.73514152 7.46153756 8.01793137 9.34216581 6.70319901 9.08556992 10.33117694 9.48781713 7.15017885 4.00634291 9.07173747 10.63051951 8.97398774 10.92828008 9.60385516 10.21642528 7.55199274 10.41409060 NA 0.63710012 8.70857180 11.23081172 12.82857990 8.74214469 17.58485282 12.98804854 9.86352161 5.09654018 1.63710012 5.22207036 8.29532079 9.68967743 6.21201869 12.92039067 1.63710012 10.07867027 13.14060386 6.73864761 9.35954116 10.79445632 9.09927074 4.00634291 NA 14.62120526 11.14663696 2.95902822 8.43152518 NA 5.54400000 9.78091766 10.45515890 8.80536372 10.81245097 10.17173650 9.90076977 4.80703543 11.26798318 10.36786256 5.07451400 7.97398774 3.57571168 9.90233366 14.34313764 7.48831737 10.86111103 11.13662309 8.99025631 2.22206262 0.63710012 8.46577494 8.81701849 12.76767991 1.05213762 5.13960865 7.23205631 10.02942680 11.14919133 4.13960865 7.04649979 5.33755055 10.64553802 11.68559624 2.37406572 13.78224545 6.09654018 7.08005322 12.00106155 12.72069949 12.77367332 8.28096559 10.98029505 10.86392289 10.03696399 10.44446426 4.69600494 8.11284294 12.48651445 9.28696429 0.05213762 10.09449024 8.89606776 2.22206262 3.12424541 9.22332359 10.69960525 10.02225281 9.03656542 15.25331357 10.54199478 9.45089059 7.12896250 2.05213762 15.39722286 11.35364303 13.57852383 12.68945098 10.26038116 9.26038116 7.68514193 11.10674776 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.18014115 12.08711771 6.32827101 9.19041856 4.75258805 11.28995432 3.51158189 NA 8.86753019 7.14490394 NA 7.05259739 3.05215502 10.40198099 9.00197362 3.44446830 8.27614861 9.84575018 11.07139009 10.24751909 9.54247630 6.96503620 11.41024855 3.13961683 9.95150373 9.90076977 0.05213762 NA 11.30747053 2.51156924 13.29524644 12.28531711 8.26646611 9.93096407 10.93593563 9.48155365 4.93479011 3.05215502 NA 3.44446830 9.00197362 9.20189405 10.29769961 1.85949255 9.60166198 7.05214632 9.74824502 7.59517840 9.83022394 NA 9.75345328 3.95903750 3.37407963 9.45027058 5.76968712 6.77324604 9.71837087 9.27614861 9.19041856 0.05213762 13.82852848 1.63710012 9.85627783 NA 9.71035841 5.44446499 7.21705425 9.28336807 12.609759 7.160671 7.900770 17.584853 10.411896 10.311302 12.920391 11.222385 9.160031 10.728545 13.385093 10.940510 8.817018 6.659477 2.752577 7.237023 11.545001 11.332628 6.096540 8.838416 8.780067 9.213279 10.011178 7.803691 5.934790 10.928280 6.222072 1.374066 9.463658 7.897292 13.607215 10.430442 8.110139 8.754320 11.002338 7.017931 8.805364 10.243206 10.985838 10.207598 10.576199 9.254271 1.374066 10.219051 6.427187 7.800340 11.149191 7.465775 10.761976 10.645538 7.710358 14.065993 9.469999 10.208230 13.196327 11.264947 9.404190 2.752577 TCGA-AR-A1AU 39 0 NA 2318 breast stage iiia t2 n2 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 96.50.0 2 2 2 4 3 2 3 3 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.112456e-07 12.1187917 7.5475616 6.8758624 11.1648167 2.8383871 10.5126724 NA 10.4229542 12.1493587 13.0774832 10.0370261 7.3553317 8.7591319 9.9720027 5.8478466 8.8240795 10.2804577 10.0276916 8.0478404 3.6348488 10.8592941 10.1110784 14.1363593 11.8569534 9.0062015 10.9534994 3.6348488 10.7190985 0.5904344 -1.4096615 9.0125245 13.0480330 12.8741992 8.8572464 12.7852166 12.8913842 9.5432010 7.0903051 4.8383871 8.7248859 8.3453471 8.8595863 8.7839850 12.3788722 4.8192799 10.0354745 13.4116856 4.9998512 8.4343809 11.3887290 9.7376646 8.3848757 NA 13.3355762 10.7901658 2.3978030 8.6142140 0.1754288 4.0498921 10.0893089 10.3836566 9.2716981 11.2672983 9.8460785 10.0631506 1.5904823 11.6319478 10.6726088 6.7553670 7.1977897 10.2257244 10.8534354 15.4341477 8.9372505 11.4449386 10.8072056 8.2198161 0.5904344 6.0982553 9.5763016 9.3158259 11.8303565 NA 4.5904583 7.4265097 10.7882907 11.2806760 10.6467588 5.1903739 5.1603152 10.0570461 12.3331902 3.6348488 14.0363475 5.2343174 7.8072055 12.2892729 12.2920911 12.9950026 8.7852167 10.2019456 10.9646842 10.5262104 11.5761238 5.6672762 8.1922307 12.0811852 13.0731416 NA 10.5798543 9.2611159 2.0498747 3.9123912 9.4476631 10.2562397 10.4134288 8.8312512 15.5837409 10.4719561 9.6135210 7.6832171 4.6565479 15.6447249 8.5167559 12.8569535 12.2405017 10.4122337 9.3192307 7.9956010 9.9927897 0.00586770 0.00670210 -0.01405400 -0.00305350 -0.00508610 0.00148070 -0.02100400 0.49498000 0.49308000 0.44770000 0.44770000 0.89814000 0.00000000 0.00142350 0.44974000 0.46968000 1.34690000 0.00253360 0.00253360 -0.00218020 0.00531170 0.00531170 -0.48184000 0.00798940 0.00656300 -0.00425630 -0.00425630 -0.00425630 0.44889000 0.00392220 -0.46000000 0.00128480 -0.00305350 -0.00167870 0.00128480 -0.47646000 0.00086866 -0.49556000 0.00128480 -0.50232000 0.00524160 -0.00411790 -0.01006100 -0.00287250 -0.00287250 -0.00287250 -0.00037916 0.00142350 0.00142350 0.44974000 -0.47783000 0.00253360 0.00253360 0.00253360 -0.00218020 -0.47636000 0.00531170 -0.00148940 -0.48184000 0.00798940 -0.00134910 -0.00425630 -0.00425630 -0.50004000 -0.93480000 0.00406110 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 8.9213765 14.2645416 9.1782373 10.5544395 3.2343174 10.9311444 0.5904344 2.3978030 8.4343809 9.9827772 3.4973441 9.0012821 4.6779197 10.0544948 9.4920809 2.5904583 8.2575712 9.4499944 12.6420085 10.2553514 9.5772190 7.8360125 11.0122616 2.5904583 9.8718102 10.0631506 4.7402044 -1.4096615 10.5684550 3.6348488 12.3351885 12.2463258 8.1922307 10.0256090 8.2288956 9.2079272 5.7402071 1.5904823 1.1754288 1.5904823 8.1622126 9.7338429 9.7357550 6.8804786 9.5392065 6.3386526 9.6686106 6.8192786 9.6369017 0.1754288 10.9380811 2.9827837 4.5211953 9.6535717 6.5427347 4.9123864 8.9425031 7.6321191 10.8102333 0.5904344 13.7622620 0.9124199 10.9771306 NA 7.3386526 5.7402071 7.8850807 8.7703689 13.515133 5.219815 8.488305 12.785217 10.122328 10.466977 12.378872 12.382538 10.207808 10.955415 13.421866 12.691779 9.315826 7.074275 NA 6.939188 11.719904 11.5147155 6.6457420 8.7197427 8.5648743 8.6858568 10.3437809 6.1829167 7.3783625 11.8569534 6.0083121 3.5446585 6.9123876 8.0762892 12.6516621 9.9843864 9.2522378 9.4631346 11.4905718 5.4106396 9.2716981 9.7913583 10.3243224 9.9061754 10.6746037 9.1286486 2.9123816 8.8395257 7.5549740 6.8096280 11.2806760 6.7197434 11.0980066 10.0570461 7.0250875 13.4610652 10.2795841 9.6280067 12.7178092 10.8195789 9.5627215 0.9124199 TCGA-AR-A1AV 68 0 NA 1864 breast stage iib t2 n1 m0 2-10-2014 male 2007 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 96.50.0 7 2 3 3 2 1 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 1.39057e-07 11.6815603 4.9648976 7.7836590 11.2811392 -1.7898605 10.5937163 NA 10.7391986 12.1274774 9.8842044 10.4907828 7.7374894 8.4543758 8.7227526 5.5228938 9.0492158 10.6707240 10.6960929 6.9139162 -0.7901100 10.5358796 8.8903716 14.4978507 11.7098580 8.7472306 11.2598606 3.6023262 10.8217285 NA 0.5319678 7.8877318 13.0092431 10.7506245 8.9043700 13.2083821 13.9920633 9.0117204 5.1872927 NA 5.1048315 8.1525267 10.6648254 7.1525262 13.4054489 1.9104641 9.7365114 13.3056975 NA 9.3321930 10.7108539 7.6087560 5.7018651 NA 13.5450548 11.1014161 3.1642070 6.2489314 -0.7901100 4.3597601 9.7242330 11.0393384 10.7945049 10.9111019 10.6550269 9.3386508 0.5319678 12.1181232 10.6108915 6.9139162 9.5526424 -1.7898605 12.1073849 14.5762831 10.0727618 12.1467420 11.7246029 7.9565266 1.2100147 5.5937153 8.5872225 9.4703437 11.2739127 -0.7901100 6.6066169 7.3973640 9.3973642 10.8113186 4.9781956 5.3597601 4.8682225 10.6681623 12.0444831 3.5675698 13.8373750 5.4388318 7.3948871 12.0939918 11.9752981 13.1354274 8.2198408 10.3673591 10.3139555 10.1506450 11.3891437 5.5937153 8.9548460 11.5742835 10.2170393 -0.2050643 9.9186649 9.0857614 1.2100147 3.1688506 8.7462593 10.9415432 10.7850785 8.9481044 14.9784678 10.7569065 9.9004466 8.5000308 1.6694350 15.8329576 8.6278647 12.0293929 10.9542152 10.1897945 9.1429650 9.0333792 10.8643303 0.9990400 1.2796000 1.2796000 -0.0354480 -0.0354480 0.0000000 0.3678900 0.3461600 0.3461600 -0.0094046 -0.0094046 -0.0094046 -0.0284910 -0.0284910 -0.0114730 3.1177000 -0.4299600 -0.0457700 0.6605000 0.0102750 -0.0310860 0.3375200 0.1971000 0.1971000 0.1971000 0.2451300 0.2451300 0.2451300 0.3254300 -0.0586630 -0.0273980 -0.0099565 -0.0354480 0.0000000 0.0000000 0.5327400 0.5327400 0.3461600 0.3461600 0.3461600 0.3395900 0.3460000 -0.0094046 -0.0271240 -0.0271240 -0.0271240 -0.0271240 -0.0284910 -0.0284910 -0.0114730 -0.4299600 -0.0457700 0.6584800 0.6584800 0.3412800 -0.0310860 0.3772600 0.3399900 0.1971000 0.1971000 -0.3919300 0.2451300 0.2451300 0.3254300 0.3408000 -0.4528900 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 8.0060517 13.1615245 4.5137939 9.3692527 3.1609524 10.9300425 -0.2050643 NA 8.2406793 7.6320770 NA 7.9237939 1.0173518 10.0964707 9.2968118 1.7949772 7.1786788 9.6658530 5.9242567 10.0003606 10.0135943 8.5023338 10.9169397 2.4579357 10.1191551 9.3386508 2.5319428 0.5319678 10.2509867 3.3392942 11.6516595 12.0227910 7.6998597 10.3208216 6.9615562 9.1887226 2.8538759 1.2100147 -0.2050643 3.2544126 8.4697554 7.8664370 9.8370899 2.5319428 9.3510781 5.6857468 10.1598388 5.7413942 9.3942676 NA 11.4693140 2.2100147 8.6857454 9.8202942 7.0265157 -1.7898605 8.9242576 8.0092934 4.3185338 1.3799536 13.5612619 -0.2050643 10.8724580 NA 8.4543758 4.4388318 8.0397350 9.2399894 14.579923 5.419465 8.626810 13.208382 10.365779 11.352917 13.405449 13.084321 8.994647 11.726943 13.336878 10.079220 9.470344 9.094182 1.379954 7.023793 12.029792 11.0691586 7.5409293 8.8744595 8.9607190 9.5426080 10.4324809 6.0987543 10.1127640 11.7098580 6.7607585 -1.7898605 4.8824376 8.2317833 12.0840328 9.4460262 8.6172797 7.7569065 11.9361238 2.2974849 10.7945049 10.1685648 11.1885438 9.7940350 10.9991381 9.4685780 -0.2050643 9.2358230 8.3773298 1.6694350 10.8113186 8.2720582 10.4642908 10.6681623 7.4603101 13.0898346 10.2149348 9.4994547 13.2515429 10.5506967 9.3126438 0.5319678 TCGA-AR-A1AW 65 0 NA 1935 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 96.50.0 5 5 2 5 3 2 1 3 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.171709e-07 8.343418e-08 11.3926455 8.6408508 7.3155001 11.5116480 -1.4020160 10.9687833 NA 10.0976695 11.9646921 9.4487917 9.7708761 8.3560469 9.1036351 8.9901411 6.1752531 9.9493150 8.8587432 10.3451775 8.8610928 8.1016496 11.6999633 8.9954981 12.1797303 10.6111463 9.6779749 10.8823585 9.0552043 10.2280907 -0.4022066 4.2702523 10.4437056 10.9755764 13.0309526 7.0029646 12.3355990 12.0974204 8.6639128 6.5751035 4.5978231 6.6422178 9.7968824 8.7309660 5.7475700 12.2531307 NA 10.7944257 12.8599918 4.4307135 9.8057469 10.8212220 4.9553733 4.8457510 -1.4020160 15.1228285 11.3985213 2.0572423 8.8832258 -1.4020160 7.7576947 10.1648289 10.0639001 9.9799072 10.7649281 10.4191989 10.0402488 4.7876466 11.8464924 10.7526416 5.7876492 8.6090509 1.5978410 10.9987030 14.6881221 7.9960113 12.1781999 11.5797475 10.1174599 1.5978410 4.5285588 8.6958557 9.8409975 11.3893935 NA 5.3660074 6.5520204 10.8463442 10.9279002 6.4804671 9.3051828 5.7777327 10.4491822 11.9763894 4.9376740 13.3976617 4.1524106 7.7501087 11.3487399 11.7527998 13.2263830 7.4275467 9.8169921 10.7043866 10.2940739 11.4031644 4.9197500 8.1389204 12.1452001 10.9284604 NA 10.1031389 10.1495318 2.4051755 4.7283450 10.3962953 11.3842974 10.3376042 9.4188003 14.3516410 10.2768637 11.1213855 8.4003398 8.0715294 14.8947577 7.2808181 12.5838433 12.7664957 10.1026425 9.0796229 8.4433137 10.3169727 -0.12356000 0.37545000 0.37545000 -0.00041585 -0.00041585 0.04499900 -0.01876500 0.06446200 0.06293700 -0.18949000 -0.18949000 0.94078000 0.19375000 0.19375000 -0.19325000 -0.14652000 -0.14652000 -0.05091100 -0.05091100 0.12859000 0.14803000 -0.19088000 0.17272000 0.17272000 0.17272000 0.49147000 0.16460000 0.16460000 0.12992000 -0.12356000 -0.12356000 0.00000000 -0.00041585 0.04499900 0.04499900 -0.01876500 -0.01876500 0.06446200 0.06293700 0.06622900 0.07067300 0.16355000 -0.19525000 -0.10592000 -0.10592000 -0.10592000 -0.10592000 0.19375000 0.19375000 -0.19325000 -0.14652000 -0.05091100 -0.05091100 -0.05091100 -0.23408000 -0.09604400 -0.18496000 -0.19960000 0.17272000 0.17272000 0.44562000 -0.20523000 0.16460000 1.53990000 -0.31949000 -0.07107100 0.194 0.194 -0.147 -0.147 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 0.194 0.194 -0.147 -0.147 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 10.7608443 12.2885855 8.7826988 9.2088484 7.0109018 10.4168051 7.6034483 -1.4020160 8.6971712 5.8266425 NA 8.2396043 3.4558072 10.1524124 10.0034970 5.1676791 12.0956754 9.7752432 9.6793070 8.7488402 9.1349158 8.5388710 9.2317269 2.5978172 9.0177839 10.0402488 4.4307135 NA 11.2228474 2.9901380 12.7001274 12.0403784 7.1638781 10.3270195 10.9315380 9.3214846 5.7576954 3.7677501 0.9197596 1.4051755 10.0407671 9.7507422 9.6435833 5.2843253 6.6537021 5.7876492 10.7608443 6.8266425 9.6965136 -1.4020160 11.1778466 5.0896761 4.2982624 9.1899908 5.0392744 10.6267656 10.0013682 10.7922727 11.8531473 0.5977934 13.2622153 2.0572423 10.2312729 -1.4020160 9.0438730 6.6312469 7.5166865 8.5650499 10.905175 6.603448 8.781459 12.335599 10.282572 10.327869 12.253131 11.189112 9.241680 11.443706 13.617154 11.764301 9.840998 8.393863 1.767740 8.073557 10.869870 10.993893 6.392240 8.769000 9.376722 9.132126 10.346591 10.028276 8.254248 10.611146 5.007213 3.405176 8.280818 8.409134 10.223989 11.437815 7.486567 7.462010 12.510339 10.819411 9.979907 10.633654 11.121631 10.049550 10.735455 8.592177 4.325746 9.853094 9.279396 11.730323 10.927900 6.227181 11.202015 10.449182 8.055204 13.428251 10.067465 10.564689 13.111551 10.804228 9.965784 6.711565 TCGA-AR-A1AX 64 0 NA 1890 breast stage i t1 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 96.50.0 7 2 2 5 3 2 3 3 2 2 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 5.562279e-08 11.3154792 7.9976119 6.8821343 11.6641666 0.1816751 10.8425821 NA 10.1877870 11.9128724 11.0229971 9.7816076 8.1397642 8.5882540 10.4085083 7.2151175 9.8104441 10.2315433 9.7534474 8.2620681 2.6841904 10.4315983 10.2022118 12.5492005 10.6878370 9.4755496 10.5740122 8.4975992 10.3465892 0.5967444 1.9186534 9.8582397 12.4784198 12.3702836 9.3169766 14.9757383 12.0795403 8.8576517 7.2585104 4.0561673 6.5155958 8.8705278 7.5036230 7.4732495 12.2308627 3.1816910 10.3390417 13.1512612 7.0805479 9.0945842 11.1661132 4.9717734 6.5392472 -0.4033510 14.8995548 9.6149325 4.3780954 8.6973947 -1.4031602 5.2691566 10.7917968 10.3075387 9.3723425 11.8805441 9.9214755 10.2976054 3.4040857 11.8390132 10.6818727 6.6411269 7.8493976 7.0061230 9.7747745 15.0456713 8.1828964 11.4707531 11.0883349 8.9432459 2.5967205 1.4040857 9.0124740 9.3541222 11.9809764 -0.4033510 3.3516142 6.9141447 10.5974366 10.9158399 6.8351371 8.1416969 4.8821343 10.6668532 11.5954990 0.9186915 13.5855501 6.2114425 7.0684075 12.2812618 12.1917566 12.9404038 6.5910855 10.2500253 10.8381196 10.4907845 11.5816847 5.4169107 8.3109776 13.1652822 11.3152652 -0.4033510 10.0830645 9.9625080 2.6841904 3.9941905 10.3284756 10.6691999 10.1961803 9.0219483 15.2949350 10.4670970 10.8803995 8.2762124 10.2700413 15.3456327 9.6775498 13.0261390 12.5650391 10.0282299 9.0755019 8.2744518 10.3719146 0.08744200 0.08744200 0.08744200 -0.00133600 -0.00133600 -0.00230550 -0.00189000 -0.00175150 -0.00175150 -0.17115000 0.71259000 0.76952000 0.00102050 -0.00161300 -0.00046438 0.01479900 0.01479900 0.00282450 0.00282450 -0.06450400 -0.19270000 0.19974000 -0.12468000 1.30660000 0.03924600 0.19335000 0.19335000 0.19335000 0.00074316 0.08744200 0.08744200 0.00000000 -0.00133600 -0.00230550 -0.00230550 -0.00189000 -0.00189000 -0.00175150 -0.00175150 -0.00175150 -0.00050458 -0.00098241 -0.17115000 -0.01047100 -0.01047100 -0.01047100 0.00476890 0.00476890 0.00337980 -0.00046438 0.01479900 0.00282450 0.00282450 0.00282450 0.00102050 -0.19270000 0.19974000 -0.19510000 -0.12468000 0.03924600 0.00741090 -0.17292000 0.19335000 0.00074316 0.14197000 0.00796760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.000 10.7669703 11.9801666 7.5006141 9.8303520 6.4609178 10.5047496 6.9498792 NA 8.5096214 9.2468864 0.5967444 7.9602539 1.9186534 10.5226575 9.6533700 3.5036286 10.6232557 9.1134171 10.1045269 10.4504317 8.9348446 7.6493000 10.3665701 3.8061900 9.1994311 10.2976054 3.6841904 NA 11.2634001 2.8446669 12.7945633 12.1882546 8.3976323 9.6329060 10.7382008 9.2779708 9.9354686 1.5967444 0.5967444 1.9186534 8.5639585 9.1045269 10.3144087 4.3246522 8.5438141 6.0805489 9.6016549 6.0561630 9.1722715 NA 11.2647308 4.1513231 4.7666588 9.2465632 6.0881840 7.9825949 9.9209129 8.9310055 8.9354686 NA 13.3738335 2.5967205 10.1339507 -1.4031602 8.2441907 6.0145852 7.5711466 7.9209126 11.913523 6.619100 8.479375 14.975738 10.182634 10.457431 12.230863 11.871110 9.195399 11.231770 13.123170 11.288476 9.354122 8.247784 1.918653 7.442222 10.729553 11.312480 6.652015 8.652015 8.860002 8.445355 10.491683 9.397632 7.761639 10.687837 7.018797 1.918653 5.980437 8.057168 12.114402 11.068915 7.969597 8.871693 12.218097 9.008243 9.372343 10.294134 11.193854 10.579013 10.830951 9.728589 8.755342 10.071371 8.432751 9.479375 10.915840 6.766657 10.773834 10.666853 7.769235 13.488990 10.107002 10.537780 12.687176 10.166588 9.756604 3.726014 TCGA-AR-A1AY 65 0 NA 615 breast stage i t1 n0 m0 2-7-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 96.46.0 4 4 4 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 9.17776e-07 2.781139e-07 12.5735787 4.1701734 7.1738510 11.2729277 -0.4445765 10.5792198 -1.4445765 9.6567845 12.4997199 7.6561281 10.2537361 7.9838259 7.2901746 9.4126689 8.7514527 8.1460523 8.6402739 10.1761435 9.1609449 1.5554726 9.2876330 11.4999945 13.2104370 10.3688458 10.2150154 10.3149376 2.7253922 11.2395544 4.4381065 0.8774302 7.5806053 11.6615376 11.7224131 7.2969327 11.6716469 12.5047450 10.4250592 6.9520703 3.5998652 7.6429282 8.3531270 8.5023716 9.5038327 5.4979795 NA 11.1708652 9.7854858 7.5778336 8.9743721 11.3480524 7.9261531 4.6847458 2.7253922 13.5954032 7.7697843 2.8033924 9.8586754 -0.4445765 3.7253922 9.4540669 10.8500862 9.0573027 10.7791656 9.7926755 9.7285178 8.4258302 11.8629509 11.3537347 3.3103547 6.9733185 0.5554235 8.3915160 15.8925821 9.5437596 11.1404280 10.5437951 11.7520676 0.1403860 -1.4445765 9.0839196 9.7483747 12.0940182 -1.4445765 3.4134451 7.9456346 12.1159177 8.4817615 5.0311967 7.0433051 6.4134468 7.8269285 12.1579324 2.0148908 13.7695568 3.4134451 7.9754256 12.5582805 11.6493781 12.5460126 5.0632613 10.3899365 11.3337480 10.9563876 11.3810206 5.8033924 8.6202081 12.2083104 10.3780363 3.3628205 10.3178475 10.5754036 1.5554726 4.1479253 10.0960779 8.4935749 10.9168610 10.2270065 14.7026306 10.8572474 10.3748463 7.2765646 2.6429326 11.0677121 6.0790282 12.4545391 12.2383503 10.1655675 9.8187346 8.6269279 10.9198956 9.1490e-01 1.1778e+00 4.5726e-01 5.6438e-02 6.5928e-03 -6.7256e-01 4.4638e-01 6.7539e-01 1.3958e+00 7.9842e-03 6.3256e-01 1.6227e+00 1.1304e+00 -6.8592e-01 2.1250e-02 1.3280e-02 1.3280e-02 8.2626e-03 6.6398e-05 4.9616e-02 -6.8984e-01 -1.5951e-02 -7.0635e-01 -6.6823e-01 -3.9314e-01 -4.5028e-02 -4.5028e-02 -4.9630e-02 6.3837e-01 -7.0904e-01 3.3899e-02 -6.7534e-01 2.1047e-02 -5.7478e-03 -6.7256e-01 -6.7724e-01 -6.7724e-01 8.2626e-03 1.4257e-02 -1.8375e-01 2.1946e-02 7.7058e-03 6.2578e-01 6.6059e-01 -6.8533e-03 -6.8100e-01 -6.8100e-01 -1.0020e+00 -7.5066e-01 2.4756e-02 1.3280e-02 6.6398e-05 6.6398e-05 6.6398e-05 -6.5515e-01 -6.8984e-01 -6.8711e-01 1.1467e-02 -7.0635e-01 -6.6823e-01 -5.4713e-03 -4.5028e-02 -4.5028e-02 -7.1297e-01 3.9263e-02 -1.5752e-01 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 7.0271408 13.2012364 5.7153361 8.7489908 2.1404188 11.7986394 1.5554726 1.1404515 8.6937371 8.4072146 5.5998593 8.7187377 3.0148908 10.2074140 9.6594089 2.8773909 7.0352456 10.8310080 5.0946246 8.0087362 8.8516703 8.0553112 10.7818776 0.8774302 10.3895414 9.7285178 2.0148908 -1.4445765 9.8245921 7.5441500 12.3579818 12.3550506 6.8315897 9.8175603 8.0473186 9.8251766 6.8818946 2.3628065 1.1404515 NA 8.4638582 9.3120218 7.4040882 2.2558935 8.7926156 4.1404269 9.3351849 8.0332237 9.8728780 0.1403860 13.5122953 3.6429326 7.0352456 10.0383943 7.9064710 2.0148908 7.7452898 7.5943843 3.6429326 8.2748543 13.4426384 -1.4445765 11.3756444 NA 9.6769990 1.8773909 8.3219944 6.0553106 12.160179 9.425830 7.561090 11.671647 10.329429 11.670346 5.497980 10.236264 9.484724 11.338054 12.890926 11.655635 9.748375 7.010792 5.388355 7.626927 11.987746 11.019756 7.170175 8.840868 9.803393 9.500177 9.697700 4.621554 6.994257 10.368846 9.691816 5.868348 8.818735 9.967908 12.790133 10.937819 7.661374 8.477307 9.897540 3.725392 9.057303 9.479536 12.131832 10.132894 10.471345 10.243716 NA 10.172024 6.985918 4.110054 8.481761 8.071165 9.912468 7.826928 7.808131 13.550275 9.722884 10.181174 12.550526 12.378136 8.826928 0.140386 TCGA-AR-A24H 65 0 NA 3333 breast stage iia t2 n0 m0 2-7-2014 female 2001 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 142.45.0 NA NA 4 3 NA NA 1 2 1 4 1 1 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.191507e-06 6.938058e-07 11.1959936 4.6418350 8.5002810 11.0038199 NA 10.5927657 2.2926934 10.0415173 8.3255838 7.4815686 10.5014425 8.0335106 8.0652750 8.8805077 6.4356436 8.6627503 10.5349524 10.2180634 6.6882713 3.7583458 10.4400117 8.9115954 12.2469511 12.0745917 9.2568201 10.7784190 5.8251801 11.5112684 NA 4.1482996 8.0424753 12.1920425 13.1051303 6.1577552 13.4859176 12.6644104 8.9630888 4.9337898 2.7077236 7.1648104 8.9268916 9.4900193 4.9003693 13.3242063 0.9003355 8.7442893 13.8041794 1.4853238 9.0713698 11.5125455 4.2041485 5.9171763 -2.0997418 12.9338974 8.3253846 2.1482834 8.0244892 2.9878302 3.1482996 10.3656794 10.6888826 9.5338176 10.7415394 10.4874424 8.6535849 0.2223100 11.6935650 10.0389600 6.4740158 7.6702058 12.9157396 10.8945448 13.3107201 8.3316985 12.1469603 12.1855536 8.4366154 1.4853238 0.9003355 8.0840037 9.5347254 9.9881625 NA 4.4081616 6.4317500 12.0013589 11.0113408 4.9003693 6.4356436 5.8251801 8.6060006 11.6856163 3.7077236 13.1656902 7.0270722 7.6180448 10.9889908 10.9818516 13.3749930 7.6435193 10.7747732 11.2568201 10.9622186 10.8063192 4.6552545 8.7165520 12.1732166 8.9261999 -2.0997418 9.0702933 9.7948070 -0.5145732 3.7092686 9.2889237 7.5990730 10.7181513 9.3323879 14.7531049 10.8842524 10.1822981 9.2964377 1.9878302 14.8881651 6.7799517 12.4442458 11.0070946 9.6085899 9.0062767 7.1903867 10.0458769 0.412520 0.154190 -0.367210 -0.268360 0.159720 0.156340 0.147480 0.185010 0.453330 0.123060 0.123060 1.671400 0.598290 -0.216960 -0.298340 -0.298340 -0.298340 0.452510 0.066863 1.060200 -0.260490 -0.098625 0.125710 0.763780 0.763780 -0.655620 -0.228170 -0.228170 0.544960 -0.676060 0.780880 -0.237350 -0.632970 0.305280 -0.942140 0.000000 0.000000 -0.691840 0.093828 0.582630 0.404180 -0.688930 -0.724160 0.100220 0.799700 0.072335 -0.215470 -0.216960 -0.681280 -0.689480 -0.692020 0.452510 1.403100 0.691910 -0.065390 -0.241750 -0.399140 -0.694100 -0.677890 0.763780 -0.284600 -0.219430 -0.228170 0.166620 0.061032 -0.690930 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 -0.295 -0.185 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.000 0.000 0.116 -0.065 -0.717 -0.594 0.100 0.100 -0.524 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 -0.295 -0.185 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.000 0.000 0.116 -0.065 -0.717 -0.594 0.100 0.100 -0.524 7.9583601 10.9843460 2.9003742 8.1171142 2.8922356 9.8794361 1.4853238 NA 8.6585914 5.9059934 NA 8.0310930 2.2926934 10.4175454 8.9838475 7.2177803 9.1303886 10.3972220 5.5798469 10.6768012 9.8736888 8.4424327 9.6623348 1.7077015 7.9502164 8.6535849 2.6008168 NA 10.5921116 -0.0995872 11.8946332 11.5480514 5.8428833 10.3224329 11.3366893 9.3720434 6.1339888 1.9878302 -0.5145732 8.2883853 6.7921513 8.4462980 10.6894942 3.3266380 3.8638394 6.6077268 10.3355175 8.1363821 10.3735665 -2.0997418 9.7458582 3.8776461 3.4549523 9.3906877 6.6072090 3.7830061 7.8890531 8.8883426 8.2155180 -2.0997418 12.8276369 -0.0995872 10.0808989 NA 8.5021388 3.6817304 7.0450268 8.8132576 8.679258 7.744289 8.329775 13.485918 11.091964 10.538351 13.324206 13.867279 9.398155 11.382168 12.429799 13.187864 9.534725 7.611175 3.681730 8.773812 12.245635 10.634019 7.723735 9.172998 10.029973 10.656507 10.801401 6.190388 3.707724 12.074592 9.035436 0.222310 4.911596 8.628561 9.322959 9.881935 9.778036 8.710940 11.313070 5.770734 9.533818 10.090193 12.608698 8.805755 10.880329 9.052653 2.148283 8.651444 5.628290 5.318219 11.011341 5.801234 9.666069 8.606001 8.073021 14.168050 9.868315 9.673507 12.304911 10.131589 10.048527 2.070286 TCGA-AR-A24K 46 0 NA 1548 breast stage iia t2 n0 m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 0 white NA 142.49.0 NA NA 3 4 NA NA 1 1 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 10.8855654 1.6930520 6.5328250 10.9000628 NA 11.9825434 -1.7666027 10.0904314 12.5645337 11.3280245 9.8958402 7.6323606 6.0665069 9.8432573 6.4910049 8.6609297 10.8319020 9.9683265 6.4479362 -1.7666027 11.1043669 9.7756814 12.7064346 11.2644564 10.0869264 10.5823451 3.5190134 11.2139350 NA 0.2336427 6.7610938 9.5538533 14.1283162 7.2861853 12.7105529 12.8867978 8.3525577 7.7939498 4.3833656 6.4332900 8.1524801 10.1569444 6.7493170 13.3661166 -0.7663573 8.2766441 13.7494707 6.6930478 9.6113696 11.7102365 4.1405087 6.1819851 -0.1814766 11.7521913 7.5756913 3.3629047 7.5911685 NA 2.5555462 9.9201174 10.4848034 10.3538548 11.8010977 10.3846334 8.7910805 NA 12.5928860 10.2584102 6.2051598 7.7766488 7.8556690 12.5697747 14.3997603 8.0419214 10.0121048 12.0007668 8.3263742 1.9340635 4.5004005 9.5050799 9.6546298 10.7359515 NA 5.0915983 7.4672363 9.9444233 11.5805460 4.0149801 4.7254685 5.7254712 10.4666373 12.1562942 1.2336427 13.8289909 5.9340564 7.8483269 13.8992304 11.8224486 13.1403666 6.6344960 9.9214299 11.8476365 11.5178771 11.8901534 6.1702556 8.0084040 14.0388317 12.5534301 -1.7666027 9.7703497 9.2187473 1.0409625 3.6659044 9.6630236 8.4010348 9.9733975 9.0577800 14.5423469 10.7891646 9.9139763 8.9209926 -0.7663573 16.4529367 8.4147689 11.7718058 11.4138369 10.3789122 9.1001230 9.1047521 10.9250442 1.16810 1.18970 1.24200 0.19695 0.20060 -0.18156 -0.19087 -0.21948 -0.21948 -0.20112 -0.20112 0.92594 0.20503 0.20503 0.17886 0.17136 0.17227 -0.19725 -0.19725 -0.61508 0.82745 0.20231 0.15282 0.15282 0.15282 0.16385 0.16385 0.16385 -0.19262 0.20060 0.19033 -0.18484 0.19695 -0.18156 -0.18257 -0.19087 -0.19087 -0.22367 -0.21948 -0.21948 0.20030 0.20228 -0.20112 0.20580 -0.61037 -0.63102 -0.63840 0.20503 0.20503 0.17347 0.17754 -0.19725 -0.19725 -0.19725 -0.61201 -0.64696 0.21361 -0.65716 0.16055 0.15282 0.21514 0.16385 0.16385 -0.19944 0.19866 -0.65071 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.615 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.615 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 8.0166150 11.8611507 8.0473982 8.1101340 3.6598789 9.5745797 -0.7663573 NA 9.4521801 7.8279416 NA 7.0051069 0.8186052 10.3057494 9.6551557 3.3629047 5.8409466 9.3230674 8.7688923 10.4237502 9.3103056 7.6930485 9.1805231 1.9340635 9.1032107 8.7910805 5.2223023 NA 9.8989528 2.6930520 14.1803176 12.1625053 7.0051069 10.1109010 6.8483262 9.1636150 4.1405087 0.2336427 0.8186052 4.7727777 8.7144070 7.6806999 10.5100321 1.9340635 7.6189830 6.3473592 10.8709210 7.0247795 9.6323606 NA 10.6819913 2.1405169 3.6598789 10.2529991 6.9575850 2.1405169 7.2943129 5.4910033 3.1405006 NA 14.0317089 -0.1814766 9.9401129 -0.1814766 8.5316793 1.8185643 8.1702546 8.0931518 14.514841 5.913098 8.519019 12.710553 9.449787 11.681991 13.366117 13.372489 9.776649 11.050401 13.403698 11.849017 9.654630 8.577913 3.091598 7.580130 12.154621 10.2649735 8.4197310 9.9108960 8.9843239 9.9839051 9.5720580 4.7882054 2.4035404 11.2644564 5.8702414 3.3629047 6.2725365 7.7655440 11.8878053 9.2821038 10.2684158 7.9078094 13.7475603 3.6598789 10.3538548 10.1502428 11.6580456 9.2080314 10.4044808 9.7991950 4.0665112 8.0869419 6.2725365 3.6930520 11.5805460 6.8446417 9.8246716 10.4666373 8.4185294 15.1321474 10.7780984 10.5900688 13.2119698 10.3820934 9.5756914 0.2336427 TCGA-AR-A24L 26 1 2866 2221 breast stage iib t2 n1 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 142.49.0 NA NA 1 2 NA NA 1 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 2.781139e-07 11.00737836 6.35765229 7.30620664 10.71565326 NA 10.75847816 1.38493395 10.27613651 11.19713774 6.39394984 10.15908861 7.29904679 9.77641889 9.31924105 8.09231951 9.20130402 9.51527367 10.19874165 7.95329667 0.38493395 9.26638037 8.67313449 14.11373129 11.58487811 9.08331790 10.56636120 4.57082720 11.00646291 -0.93704939 -0.93704939 9.02520547 13.07591873 12.45467871 7.66480280 12.86175725 12.84894452 8.21150872 5.99967085 3.89592300 7.71945727 8.98412932 9.11424129 8.92256716 12.96837234 0.38493395 10.05915272 13.50448521 5.62527341 8.77985164 11.00150925 8.89513112 7.03744702 NA 12.54190558 8.04317168 2.81790972 8.40843759 0.38493395 5.45535024 10.29904656 10.93146907 10.61738132 11.71800395 10.38946184 9.15776983 1.52245756 11.71397189 9.61570136 5.23295617 7.98932808 1.23296768 11.14201705 14.07482741 8.71139888 11.61281700 11.98691687 8.68049983 1.23296768 3.45534695 8.43371979 9.83823106 11.56412309 0.06308871 7.67590059 6.94261537 10.84889346 11.14933444 8.35765317 5.93339796 4.88321023 10.07879581 11.75379425 4.89592300 13.39146184 6.14518221 7.82624466 12.54426416 12.52968239 12.85815881 8.51835967 10.23858184 11.41424766 10.82694184 10.53952545 5.28761266 8.28099017 11.98291987 12.66370025 1.06301966 9.99155076 9.36624221 -0.35199482 2.52311026 9.44457535 10.09542247 10.21055531 10.21341436 15.03478918 11.06637454 10.50442038 7.43371979 2.38496157 14.56385866 6.35305153 12.24286369 11.07931830 9.79943430 8.72925637 8.42168364 9.75000984 0.0154470 0.2428000 0.2428000 0.0186630 0.0034687 -0.0175290 0.0193630 -0.4875900 -0.0237030 0.0592230 0.0592230 0.0592230 -0.0328600 -0.4754300 0.0277780 0.5164700 0.0227250 0.0093098 0.0093098 -0.4942300 0.0185230 -0.0142280 -0.0575200 0.3802300 0.8178600 -0.0208870 -0.0208870 0.7124600 0.5385400 -0.4996500 0.0154470 0.0000000 -0.4927700 -0.0484780 0.5393900 0.0843540 -0.4162700 -0.4875900 -0.0237030 -0.0237030 -0.0074720 0.0158660 -0.4905700 -0.0193140 -0.0107840 -0.0107840 0.0059700 -0.4754300 -0.0351760 -0.4898400 -0.4797600 0.0093098 0.0093098 0.0093098 -0.4807100 -0.4739500 -0.0084385 -0.4377800 -0.4633400 0.3802300 -0.0824100 -0.0208870 -0.4496400 0.0176840 0.0062481 -0.0440090 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.472 -0.438 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.472 -0.438 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 9.11356117 13.54382254 10.30620629 9.81206368 2.06301966 10.77405400 1.23296768 0.06308871 7.83781965 8.61185439 -0.35199482 8.95166909 3.10742006 10.84152016 9.10742634 1.87038445 7.73014403 10.11831482 8.97292552 9.30143698 9.36612241 9.03816371 11.09920597 1.87038445 7.71228831 9.15776983 1.64800518 0.38493395 10.50156434 4.10742843 11.76238789 11.39744532 8.85419518 10.58438737 8.93185499 9.07146102 6.21785110 2.06301966 -0.35199482 2.38496157 8.04174292 7.05738528 9.98784481 5.09645584 9.43790330 5.91478216 9.82333651 7.27004672 10.32130388 -1.93677320 9.38946184 2.15049469 6.13984805 9.96876153 6.18756784 3.52247011 9.07005948 7.84930188 5.96992407 -0.93704939 13.09451817 0.87042391 10.12440349 -1.93677320 8.15446777 6.10195047 9.80070224 8.15974774 15.0716961 6.7738381 8.9893284 12.8617573 9.5234883 10.5126969 12.9683723 13.0989913 8.2975505 11.1952107 12.7516651 10.1884458 9.8382311 8.2651560 0.6480052 7.9654074 12.4689051 11.07931830 7.07984101 9.10057930 8.87761482 9.57033143 10.34649988 6.05738528 7.30382366 11.58487811 6.72480987 4.66294603 7.58463260 7.33829515 12.58082474 10.06162271 9.01868230 7.35535374 13.16943170 5.29185032 10.61738132 10.01431707 11.87530995 9.28522349 10.50390155 9.41065380 0.06308871 8.29697538 8.02427923 5.24294161 11.14933444 8.85744828 10.33303557 10.07879581 7.43393757 13.26369957 10.09507812 9.76477193 12.69307188 9.64893383 9.71811585 2.38496157 TCGA-AR-A24M 38 0 NA 2947 breast stage iiia t2 n2 m0 2-10-2014 female 2005 NA NA mixed histology (please specify) no 4 white not hispanic or latino 142.49.0 NA NA 2 2 NA NA 1 4 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 11.3703855 5.9868887 7.3808541 10.7288947 1.6060631 11.0427783 -1.9788046 10.3503400 12.2117777 7.7591965 10.5740135 8.2183211 8.7950675 9.5895354 7.2183211 9.8300685 10.0200472 10.4128848 7.4784849 -1.9788046 9.2158611 8.8673782 14.4686880 10.4275751 9.4368460 11.3712147 3.4473676 11.4506391 NA -0.3938421 8.6613491 13.7948101 12.5442986 7.7128475 12.7919746 14.1214586 9.3174470 6.0040968 3.8284590 6.3111234 8.6757404 9.2995538 8.4640478 13.3460583 2.5446585 10.4029175 13.7891335 5.9811060 9.1918868 10.6674379 5.3609542 6.3475346 NA 13.4132063 8.4968378 1.1910572 8.0309330 -0.3938421 5.1191362 10.5256750 10.3033239 11.3267386 12.7167132 10.6242669 9.5747335 2.6649606 12.0184602 9.5534602 5.3698329 9.6748450 3.2690331 11.3566342 14.5356180 8.5922406 12.2685126 11.9764817 8.8650252 2.1910256 4.8539956 8.5039124 10.0828130 13.5032820 -1.9788046 6.5089436 7.0267293 9.9610507 11.6718195 5.7422030 6.4177091 4.0434757 10.9300597 11.7746344 1.6060631 13.7210291 5.9339927 7.4326154 12.5767718 13.0288324 13.2012465 8.1059127 9.6983835 11.4158349 11.2695700 11.7408139 5.6649606 8.2925674 12.5198288 7.4723155 -1.9788046 9.7793275 9.2808475 -1.9788046 2.9284840 10.1445791 10.5340916 10.5392656 9.2601059 15.0737360 9.6107554 10.0175778 9.0048103 3.9983851 16.2249015 10.1834956 12.7757830 11.7468965 9.8053302 9.6233392 8.8906981 10.7359593 -0.00526100 0.95222000 1.01150000 -0.00415460 0.49023000 0.00277450 -0.00097017 -0.01272500 -0.00581400 0.00069327 0.00069327 0.00069327 0.00069327 0.00069327 0.00291330 0.00000000 0.00000000 -0.01257600 1.00670000 0.01516800 0.49632000 -0.00041585 -0.01161100 -0.01161100 -0.01161100 -0.01684100 -0.01684100 -0.01684100 0.00652620 -0.00526100 -0.00526100 -0.00110870 -0.00415460 0.00277450 0.00277450 -0.00097017 -0.00097017 -0.01272500 -0.00581400 -0.00581400 -0.00041585 -0.00041585 0.00069327 -0.00124730 -0.00124730 -0.00124730 -0.00124730 0.00069327 0.00069327 0.00291330 0.00000000 -0.59585000 1.00670000 0.53626000 0.00388540 0.49199000 -0.00433580 0.00561340 -0.01161100 -0.01161100 -0.59915000 -0.01684100 -0.01684100 0.00652620 -1.23900000 -0.00055444 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6060668 12.8502323 5.2010143 9.5843006 0.1585956 10.2241463 -0.3938421 1.7215477 7.9983840 7.6739493 0.3430098 8.6010613 1.6060631 9.9617849 9.1367981 0.6060631 8.2690317 9.5966436 10.8085987 8.6917606 9.8495701 8.4283719 10.8658100 3.8024621 8.4774588 9.5747335 2.3430382 NA 9.7839015 3.1503810 12.8347853 12.0954966 8.0393046 10.7154621 8.5573515 8.6182258 4.5129601 -0.9788046 -1.9788046 1.0211243 7.9068004 8.6302831 11.6242669 3.9037517 7.2853588 5.2109304 10.2612993 7.9174365 9.5284033 -0.3938421 11.5001266 6.6284339 4.1708544 9.8979320 4.8714790 3.9279912 9.2170916 7.9444315 6.7111025 NA 14.0532146 1.4805236 10.2019459 NA 9.0274303 5.2972281 7.9955190 7.7659378 13.0205318 4.3065029 8.3271659 12.7919746 10.7124138 10.9031741 13.3460583 13.0508660 9.5043759 11.4998574 13.5836448 9.1112165 10.0828130 8.9414570 -0.9788046 7.7267366 11.5841813 11.0168714 7.8587320 9.3748024 9.7132837 8.9392222 10.4487628 6.5407403 8.6182258 10.4275751 6.8508269 5.2878896 7.3654003 7.4477048 11.8502324 10.1539253 7.7145910 7.9083248 13.3751814 5.8155191 11.3267386 10.8742189 11.6335120 9.2201631 10.8912763 9.9825540 0.3430098 8.9539982 8.6933970 5.5985320 11.6718195 10.7816163 9.9420451 10.9300597 7.1529612 13.8723897 10.1944690 10.6193894 13.1463159 9.7967145 9.6966204 -0.3938421 TCGA-AR-A24N 54 0 NA 2388 breast stage i t1 n0 m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 2 3 NA NA 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 11.6678794 6.8961544 7.8346000 11.2272697 -0.7727518 11.2776286 NA 10.4006346 11.9424810 11.5216033 10.0629254 8.0506372 7.7741644 8.8484057 9.3014111 9.0680476 9.7799388 8.8131713 6.7818580 2.5492009 10.0362339 9.4201790 13.2639156 10.7315922 9.9285763 10.8378333 4.9277116 10.5077302 -1.7725053 6.3770161 8.0648979 11.1712497 12.8779849 9.0434533 12.6814405 12.8299106 9.1749067 7.7818587 5.0976361 8.2349841 8.1887194 10.8185583 7.5469415 12.8116451 5.5581880 8.6482824 14.2196107 3.8122312 9.2075664 11.3835109 5.7586523 5.3462123 NA 14.1710142 8.9363276 1.5491763 7.0758930 NA 5.2045516 10.0991750 10.5817947 10.2655029 10.3266176 10.2726881 9.1683174 4.3770196 11.9790230 9.5138275 6.9346285 9.2627561 NA 11.3666612 14.5182425 8.7716545 12.1287966 11.4903922 9.1394107 1.5491763 2.3147255 7.5469415 9.3173821 11.2466867 -1.7725053 6.3719282 7.1550479 10.5146935 11.3578403 5.9137702 6.4560882 4.8122312 9.4373322 11.5700389 1.3972006 13.6469008 7.0346251 7.7741644 13.0459518 12.9982949 13.1490642 7.4940563 10.3990721 11.3809801 10.8754341 11.3774930 5.1099121 7.7856905 13.9891326 10.0680476 NA 10.2423363 9.1122033 2.0346383 2.8751510 10.2572471 10.1539364 9.7161141 9.3965684 15.2635614 9.7281117 9.9146454 8.0821384 0.8122107 16.0018123 11.1801929 12.3483176 11.1024431 9.4952269 8.8863736 7.5671195 10.9667698 0.00680440 1.17090000 1.21010000 0.00000000 0.00000000 0.00917050 0.00346870 0.00013863 0.00013863 0.00097064 0.00097064 2.15010000 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00124730 0.00722170 -0.00367330 -0.74243000 -0.00027724 0.00138680 -0.05212600 -0.05212600 -0.05212600 -0.01078400 -0.01078400 -0.01078400 -0.00387790 -0.01147300 0.00680440 -0.00069303 0.00000000 0.00917050 0.00917050 0.00346870 0.00346870 0.00013863 0.00013863 0.00013863 -0.00221680 -0.00221680 0.00097064 -0.10936000 -0.10936000 -0.10355000 -0.11066000 0.00083195 0.00083195 -0.00124730 -0.00124730 0.00722170 -0.00367330 -0.00367330 -0.68305000 -0.00027724 0.00138680 -0.34263000 -0.05212600 -0.05212600 0.01251600 -0.01078400 -0.01078400 -0.00387790 0.00610900 0.00041593 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 8.8774240 12.8067035 5.2384965 9.7340731 3.8419832 10.2627562 0.5492256 NA 7.8908279 7.4728224 NA 7.5715653 3.4367215 10.6856763 9.0094491 3.8711241 8.1461328 9.4668683 8.3909196 9.3140695 9.1789188 7.3946882 9.8037542 1.9277069 10.0261465 9.1683174 5.7664282 -1.7725053 9.7009754 3.1814683 12.5309792 11.9201032 8.0852510 10.5665631 10.7258697 8.7060394 2.9821631 -0.1877072 0.5492256 9.8974834 7.4536822 8.1887194 9.6984369 2.3972006 7.5555853 6.2216239 10.2798378 6.0151719 9.5458126 NA 9.9023447 2.8122312 4.0086303 10.0039084 6.3802636 7.0249313 8.2045496 6.9483684 7.9585887 1.3972006 13.4030922 -0.7727518 10.2276220 NA 6.1220867 4.5671195 7.8711259 9.2503311 13.897803 5.304084 9.090682 12.681441 9.558187 11.520023 12.811645 12.777896 9.273589 11.297183 13.315685 9.530480 9.317382 8.546942 2.227279 7.140159 11.192333 10.8543476 7.4071785 9.1037866 9.1770966 10.0208730 9.5431382 5.7895128 9.8652531 10.7315922 6.4656741 4.0601598 1.5491763 8.2596736 11.9189042 9.9888210 8.3228777 8.3120784 14.4119902 7.0378412 10.2655029 10.6104340 11.0581810 9.5010653 10.7999700 9.5356088 0.8122107 8.4283154 8.3896610 7.7251215 11.3578403 8.2920124 10.0902944 9.4373322 7.8801688 13.2476421 10.4899519 10.4766796 13.6319457 9.9080688 9.3655416 3.2272636 TCGA-AR-A24O 43 0 NA 2561 breast stage iiia t3 n2 m0 2-10-2014 female 2005 NA NA mixed histology (please specify) no 7 white not hispanic or latino 142.49.0 NA NA 2 5 NA NA 3 3 3 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 5.562279e-08 10.74331022 9.71445538 7.65313097 10.81192999 2.52869633 10.92958486 2.83355806 10.29025666 11.91012113 7.58590070 9.68441657 8.26937919 8.35861472 9.58590089 7.39543902 9.38741790 10.24577694 10.36271162 8.49516828 3.93309103 10.41673230 9.96284295 10.74302454 11.55774901 9.96137011 10.65343492 6.18943518 10.59416110 1.24859555 1.61117238 9.74159507 12.88159268 13.10235261 8.07241937 11.99738934 12.69324268 9.43488860 6.60614904 4.11366716 6.92505828 8.60363376 10.05503198 8.21273226 12.88418607 2.96480523 10.65008652 12.97797547 6.33606018 8.66342148 10.42886189 9.42280990 6.48563613 -1.55894153 14.05554809 9.20113074 3.48563291 7.74958187 3.24859555 5.78109213 10.05503198 10.70245600 10.08645061 12.08701355 10.10346590 9.70978465 1.76315658 12.01666363 9.69331654 6.20279382 8.39398372 2.52869633 10.85724835 14.46215742 9.15389854 11.39434774 11.73010865 8.40990936 0.76315658 3.83355806 8.45246983 9.63230185 12.53540275 -1.55894153 5.94108753 6.94903761 10.13124053 11.93309568 11.24396088 7.15548817 4.50733164 11.15011092 12.06934631 0.02616265 13.83006711 5.34813325 7.95497039 13.13003925 12.24769148 13.13014850 7.64091515 10.20984043 11.26560467 11.13518899 11.57052559 5.24859935 7.95694238 12.26331542 9.48290171 -1.55894153 10.18649672 9.15548817 1.90068329 3.39822722 9.98379083 10.45351789 10.45456529 9.13821010 14.96402330 10.16533000 9.66403744 9.28829996 3.61117238 15.63777746 9.74502333 13.34045786 12.31679996 10.03603373 9.60928791 8.45526310 9.58999245 2.3581e-03 2.3581e-03 2.3581e-03 0.0000e+00 0.0000e+00 -1.9325e-01 -3.3243e-03 2.7728e-04 2.7728e-04 -6.9796e-03 -6.9796e-03 -6.9796e-03 6.2481e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.8394e-03 -2.7724e-04 2.2193e-03 5.8283e-03 2.7745e-03 5.2749e-03 5.2749e-03 7.2217e-03 7.2217e-03 7.2217e-03 3.0522e-03 2.3581e-03 2.3581e-03 -3.4627e-03 0.0000e+00 -1.9325e-01 -1.9325e-01 -6.7729e-03 -2.7707e-03 2.7728e-04 2.7728e-04 2.7728e-04 6.1202e-05 1.8030e-03 1.9418e-03 -5.1227e-03 -5.1227e-03 2.2595e-03 1.1261e-02 5.1359e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.8394e-03 -1.3818e-04 -2.7724e-04 2.2193e-03 7.3609e-03 -3.2681e-01 -3.6124e-01 5.2749e-03 9.0312e-03 7.2217e-03 7.2217e-03 3.0522e-03 5.5529e-03 -3.6329e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.65008652 13.28462389 5.78997177 10.12905565 2.57545756 10.62890398 2.02619807 1.90068329 8.15204902 8.85698445 0.02616265 8.94398489 4.63106935 10.09811435 9.13647083 1.02623349 10.66464096 9.80044308 12.02679197 10.16234173 9.44528742 8.26142174 11.75270708 4.44124443 8.52072749 9.70978465 5.54976773 NA 9.89451313 4.44124443 13.02332573 12.29338189 9.21931980 10.49006997 9.78387289 9.01772681 4.63106935 1.61117238 1.24859555 3.96480523 7.89656976 7.72433103 10.21231934 6.64091442 8.06925050 5.07059971 9.62859463 7.24537396 9.83355995 0.76315658 11.67755581 3.34813325 5.58079371 9.82197961 6.15967358 5.48563613 9.87430640 8.66644984 8.20611425 0.02616265 13.65882168 1.76315658 9.91240975 NA 8.18943518 7.18607659 7.97846108 8.81192983 13.311600 5.781092 8.106579 11.997389 10.325031 10.029489 12.884186 12.475612 9.267370 11.140381 13.595982 10.814108 9.632302 7.925058 1.026233 7.209427 11.143848 11.278279 6.360106 9.565364 8.835705 9.073429 10.280529 6.884186 7.991989 11.557749 5.980402 5.395440 5.127745 7.297668 11.789971 10.483586 8.500587 7.575669 12.590752 6.820621 10.086451 10.543546 11.447218 10.258226 10.719111 9.552378 NA 9.342291 9.160238 6.698631 11.933096 8.445463 10.812633 11.150111 7.309201 13.997808 10.316992 10.667354 13.106190 10.088251 9.567947 3.528709 TCGA-AR-A24P 47 0 NA 26 breast stage i t1 n0 m0 2-7-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.45.0 NA NA 1 4 NA NA 1 4 3 3 4 3 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.615481e-07 2.781139e-08 10.7207104 7.3060854 6.1993720 10.9305047 0.7956838 11.2528604 NA 10.3566202 12.0908455 10.5740016 9.9580420 7.8124591 8.6731903 9.2057485 7.0530385 9.6416633 9.7676730 9.3463974 7.8031450 1.2107006 10.1145699 9.5621794 12.7412163 11.4198368 9.8184807 10.5281007 4.7498453 10.8980572 NA 5.4103615 8.4395068 12.3669292 12.5530406 8.3386825 13.3621804 13.3208859 9.8764681 6.5007065 4.6200761 7.7459633 8.6473998 11.0134064 8.4262211 12.4900085 0.7956838 10.3179051 14.1146405 7.1965303 8.6772743 10.6274856 7.4395068 7.0018506 -1.7893618 12.6055439 11.0532977 3.5682389 7.7244156 -0.2043993 5.2875018 10.4002038 10.7972933 9.6432299 11.2705395 9.8450454 9.2720594 1.5326162 11.8190584 10.0115880 6.0624369 9.0451593 1.3806186 11.5333204 14.3858477 8.0542011 11.1115549 12.5257668 11.4994100 1.9111163 3.7956527 9.6179558 9.7681517 11.8060621 -0.2043993 6.1532034 7.3399711 10.4966682 11.2492642 6.2875037 6.3604345 5.1993740 10.6838864 11.9248262 0.7956838 13.7239839 6.4201421 7.9605575 13.4528574 13.2948321 13.1765625 8.1310410 9.7030420 11.3497597 11.1146885 11.5259792 5.5235714 8.3502395 12.6447950 10.8729114 -1.7893618 10.2834907 9.3623388 2.2107006 2.5333391 9.7781688 10.3585290 10.3702441 9.6099660 14.8787836 10.7005360 10.3331926 7.7691085 2.7956423 14.5111300 8.9513121 13.9196911 12.1139109 10.1597852 9.4201415 8.4467025 10.7835801 -0.0318360 0.9703900 0.9703900 0.0184530 0.0184530 -0.0148470 0.0887650 -0.5278200 -0.5278200 0.0540200 0.0540200 0.0540200 -0.0581980 -0.0581980 0.0000000 0.0000000 0.0000000 0.0277080 0.0277080 -0.0519240 0.0248990 -0.0051916 -0.5438600 0.5502700 0.5502700 -0.0096977 -0.0058828 -0.0058828 0.0535930 -0.0318360 -0.0318360 -0.0002077 0.0184530 -0.0148470 -0.0148470 0.0887650 0.0887650 -0.5278200 -0.5278200 -0.5388700 0.0698840 -0.0377640 0.0540200 0.0149590 0.0149590 0.0149590 0.0149590 -0.0581980 -0.0569130 0.0000000 0.0013176 0.0277080 0.0277080 0.0277080 -0.0519240 0.0248990 -0.0051916 -0.5492000 -0.5438600 0.5502700 0.0497530 -0.0096977 -0.0058828 0.0500920 0.0372880 -0.5708600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.006 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.006 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8454991 13.4301591 9.0364418 9.5455200 3.8831125 10.0818232 0.5325663 0.2106382 8.4680758 8.4358957 0.7956838 8.6400320 4.2106850 10.6719117 9.3047659 1.5326162 9.0132046 9.2713841 9.9689113 9.7055436 9.6679765 7.7362091 10.8857630 3.2106850 9.7005360 9.2720594 3.2106850 -1.7893618 10.3027844 2.9655811 12.9122111 12.1379105 8.0979089 9.9098266 8.6762544 9.0372367 4.0686708 1.9111163 1.0180644 9.0204561 7.8363969 8.1384659 9.7219466 3.2981451 7.2901728 6.0498921 9.9538395 8.1546678 9.9266500 -0.7893618 10.3787333 3.4201455 4.2550852 9.7211110 7.0027948 6.0372372 9.3572568 7.6369530 6.8688991 -1.7893618 13.6868647 0.2106382 9.9253629 -0.2043993 8.9904075 5.5505375 7.7729308 8.6411406 14.479086 6.074874 8.550538 13.362180 10.374338 10.937545 12.490008 13.007336 9.371820 10.949836 13.500923 11.150084 9.768152 8.718483 1.795642 7.834570 12.011992 11.228888 8.483318 9.337393 9.104748 10.014819 10.515490 6.420142 6.129551 11.419837 7.001851 5.339971 8.270033 7.394696 12.425007 10.564662 9.399277 8.026071 13.705762 6.653632 9.643230 10.625109 11.153752 9.992867 10.972032 9.753720 NA 9.205240 8.124251 6.911128 11.249264 9.741582 9.896304 10.683886 7.930163 14.092137 9.850933 10.282486 13.731614 10.217365 10.350239 1.532616 TCGA-AR-A24Q 49 0 NA 3088 breast stage iib t3 n0 m0 4-9-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white NA 142.48.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.330268e-06 1.14478e-06 12.7714582 4.7274849 6.9270490 11.0179592 1.2197106 10.2921576 NA 9.6933957 11.3111253 8.0854231 9.7699557 9.3927424 9.0116667 9.4107492 8.2503572 8.6216362 8.3489729 10.7400630 9.0173516 6.3845973 9.7035057 11.1522737 12.7610891 11.4656882 10.2037522 10.8787938 7.0620407 11.0939009 8.0900547 -0.1952856 8.6098587 12.3090576 12.1248888 8.6459545 12.0875478 11.7880023 10.2242615 6.4958151 3.4291473 8.9053148 8.3770370 11.7311955 8.3295206 7.6077068 -1.7804133 10.7145454 8.6553601 7.5211858 10.3801917 11.2761583 8.5143105 6.3745074 -1.7804133 14.0166030 11.5595023 2.3896219 7.7095381 -0.7804133 5.9131766 8.8084047 11.0840695 9.7728391 10.5320057 10.4479074 10.0881266 0.2197106 11.6721885 9.9981777 6.2749717 7.0651802 1.6791085 7.0807770 15.8696197 7.4877404 10.9594705 10.8870232 9.5263212 1.8046318 NA 8.5892871 9.7155449 10.9484608 1.0270125 5.8779013 5.7971194 11.5703529 10.3272340 5.1969689 6.7471672 5.4388584 9.9531290 11.9297429 -0.7804133 13.3741125 4.3282118 6.8526856 12.0275479 12.6557507 13.4109034 7.7607865 11.2924924 11.9580989 11.7675267 10.9922106 4.5947277 7.8938821 12.5790277 9.9442037 -0.7804133 9.7264934 9.9205631 0.2197106 3.5825078 10.1905149 12.4923197 9.3776684 9.6569218 15.1959296 10.7245089 10.2753113 7.2253145 9.1496879 12.5032124 8.7914426 12.5595399 12.2739550 9.4430884 10.0230138 7.7607865 9.5127247 -0.03517600 0.08276500 0.87977000 0.92046000 0.51438000 -0.43116000 -0.43007000 0.22499000 0.33141000 -0.07854400 -0.07854400 2.42600000 -0.43734000 -0.06866300 -0.00043078 0.00000000 0.00000000 1.38560000 -0.04996500 -0.83144000 -0.41915000 2.10820000 -0.44041000 -0.43680000 0.68382000 0.30777000 -0.03857800 0.35512000 0.31222000 -0.85591000 -0.03517600 0.31386000 -0.37808000 -0.43116000 0.30745000 0.41463000 -0.45469000 0.22499000 0.33141000 -0.44932000 -0.44059000 0.28802000 -1.14130000 -0.03435900 -1.16840000 0.58704000 0.43648000 -0.60322000 -0.36942000 -0.80815000 -0.34373000 1.08710000 0.30314000 -0.45136000 -0.81299000 -0.44329000 0.34275000 -0.03885000 0.46981000 -0.43680000 0.78736000 -0.09102300 0.35512000 0.31964000 -0.03026700 0.39429000 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.312 0.312 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.689 0.689 0.000 0.000 0.454 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.312 0.312 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.689 0.689 0.000 0.000 0.454 9.1541179 13.3013814 5.9745775 9.6933957 4.2420613 12.9962257 1.3896219 4.0525811 8.6385966 8.9088144 7.3770370 10.2876452 7.5416178 10.3939914 9.7120439 2.9201218 8.7205319 10.2200421 7.4817849 9.1775175 9.0002541 7.4070417 11.3867944 1.3896219 7.9322171 10.0881266 2.3071662 -1.7804133 9.8435714 5.9745775 12.5337066 11.4621197 7.5097085 10.2048203 7.7393263 9.8412840 3.9476101 2.9201218 -0.7804133 6.1622040 7.3971099 8.4497103 7.4747183 4.1265765 8.4095390 5.7895467 9.6184336 8.8991699 11.4153697 0.5416140 12.6466753 2.4676186 4.1504297 10.6263387 6.0016401 8.0525800 8.9552460 9.4370419 9.4693960 NA 13.4023558 0.2197106 10.6540575 0.8046318 8.3592413 6.3071534 8.1926696 7.3541162 13.001408 6.369437 8.215457 12.087548 9.061254 11.165134 7.607707 13.170382 9.043853 12.792035 12.783780 10.881468 9.715545 7.758849 1.920141 9.426704 10.786695 10.717542 6.555080 8.908814 8.644906 7.441277 10.766782 6.841742 5.940789 11.465688 5.620569 2.467619 8.787646 8.528609 13.467210 10.713545 7.126581 7.725501 10.637279 7.904438 9.772839 9.962841 11.282411 11.947185 10.793810 9.311125 NA 8.973684 9.893021 8.914918 10.327234 8.336034 10.584919 9.953129 7.317985 13.832155 9.822853 11.057909 12.772959 11.191772 9.336034 2.389622 TCGA-AR-A24R 45 0 NA 2653 breast stage iiia t1 n2 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 142.49.0 NA NA 1 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 12.0290570 6.8534593 6.2217012 10.7737025 -1.8709149 10.5085940 0.7138717 10.3264688 12.1483619 12.7739841 9.9724734 7.5425730 9.2575837 8.4281529 5.6525066 9.4241398 9.8963018 10.6210484 7.1119390 5.4508714 10.2223625 9.3088541 14.7515116 11.1492304 8.9298448 11.1447084 5.9618340 10.5842645 -1.8709149 5.1513109 8.4820916 11.0062291 12.7560228 7.5842718 12.2126735 13.3323312 9.1478406 6.8500443 4.6681021 6.4372843 8.5234075 10.8857097 6.4820916 12.8039647 1.7139157 9.4097157 13.9160057 2.3768738 9.6360656 11.2869234 8.6758392 8.0373377 1.2988929 12.8928352 11.1188715 2.8293828 7.6603261 NA 3.0831453 10.1019247 10.5713701 9.8892490 11.2264833 9.3762791 9.1936877 -0.2861283 11.6058177 9.6978511 5.8363029 8.1637438 1.8294031 11.9590639 14.1951393 8.5983120 11.5731833 11.6434124 8.1733388 0.9362893 2.5212518 9.3426567 9.2465881 11.4438113 NA 4.8431899 7.6603261 10.2190573 10.7748285 5.5383364 6.6406976 5.2269786 10.8716754 11.8510053 2.9363081 13.6262354 6.5677371 7.7583018 11.7398544 11.9839107 12.8203613 8.6583754 9.6277941 10.9314613 10.4153410 11.3090095 5.9103057 8.6603265 11.7325713 7.8585654 NA 10.3393119 9.5656564 0.7138717 3.0401560 9.9379092 10.9014657 10.3069873 11.1843968 14.8799005 10.1899786 10.8630194 8.6446448 1.1289532 15.1731896 8.2124244 12.0166415 10.3193869 11.0468764 9.1950340 8.4553745 10.9073794 -0.31509000 0.73544000 0.71805000 -0.00391550 -0.00391550 0.01499000 0.10975000 -0.69235000 -0.69235000 0.15676000 0.15676000 0.69404000 -0.10828000 -0.10828000 0.20072000 3.10980000 0.18900000 0.03294700 0.03944000 0.00563670 0.25695000 -0.39266000 -0.26322000 -0.24439000 1.38110000 -0.35991000 -0.35991000 -0.36826000 2.71830000 -0.33171000 -0.31509000 -0.14352000 -0.00391550 0.00010095 0.01499000 0.14172000 0.14172000 -0.69235000 -0.69235000 -0.71687000 0.00000000 0.00218160 0.15991000 -0.69108000 -0.69341000 -0.00764760 -0.00764760 -0.10828000 -0.13926000 0.20072000 -0.70250000 0.03294700 0.03944000 0.00689290 0.01806500 0.24925000 -0.42816000 0.03055300 -0.26529000 -0.24439000 -0.33367000 -0.35991000 -0.36826000 -0.02360300 0.66932000 -0.36479000 -0.108 -0.108 -0.480 -0.680 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 0.104 -0.108 -0.108 -0.480 -0.680 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 0.104 8.7482479 12.3193869 4.0831453 10.0335795 2.9869206 9.5115690 2.6525094 -0.8711787 8.6177892 7.0023886 NA 7.4120329 2.8293828 10.4415443 9.0758511 3.8013656 12.0273574 9.3298434 6.7288579 9.5330221 9.5503155 7.7288579 9.5724065 2.3768738 7.5677371 9.1936877 2.6525094 0.1289532 10.0418342 3.3383959 11.7224527 12.1742780 7.2582278 9.5703329 10.6630046 9.0932858 5.3673501 1.7139157 1.1289532 8.8987828 8.7546537 7.9539037 8.8996089 4.5039847 7.8822622 6.7101452 10.3883940 6.4952666 9.7115574 -0.8711787 10.0652148 3.1289367 3.0358350 9.8122335 7.8894985 4.4327256 8.4754586 8.1485356 6.8189426 -1.8709149 13.3234710 -0.2861283 11.4904775 NA 7.7835811 2.7139157 8.4919845 8.3347381 14.592627 5.459861 8.518039 12.212674 10.502354 10.739278 12.803965 12.837274 9.461541 11.076582 12.747158 9.998153 9.246588 8.568776 2.298864 7.941122 13.472478 10.804240 8.199066 8.894645 9.335959 9.149925 11.023766 6.652507 8.841472 11.149230 5.094730 2.035835 4.571889 9.879899 10.145753 10.283447 10.698563 9.204424 12.500245 6.516962 9.889249 11.111582 11.488420 9.306987 10.915827 8.868726 NA 8.722457 6.558142 6.023763 10.774828 6.242686 10.663005 10.871675 7.856866 13.286803 10.262408 9.625299 12.102284 9.397487 10.013879 2.035835 TCGA-AR-A24S 61 0 NA NA breast stage i t1 n0 m0 7-8-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.47.0 NA NA 4 5 NA NA 1 3 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.065304e-07 2.224912e-07 11.3794669 8.0890956 7.3843788 10.9129943 -0.1854086 11.1461869 0.5514914 10.1171624 11.6687426 8.6910403 9.5033567 8.3919524 9.8027348 9.2773664 6.8770190 9.5520525 9.3761297 10.3325209 8.0734818 6.8331874 9.9790114 9.7989420 12.3726253 10.6830889 9.8598281 10.6579212 5.7994163 10.6943620 -0.7705351 0.5514914 10.0072273 11.6781936 12.2072524 8.4255483 11.7065603 12.6326396 9.4237023 5.4193872 3.4774831 7.1060782 8.7462459 10.8357349 7.4438801 12.4945167 2.8145299 10.8525279 13.6174101 8.0813098 8.8734174 11.2082715 6.8984454 4.0369165 1.5514914 13.5498987 9.4322970 2.1364539 7.9386445 NA 5.2629856 10.0604724 10.9286996 9.5327710 10.5983403 10.4637797 9.7658082 1.9300182 12.1368273 9.7735594 3.8734195 8.0750512 6.1661992 11.1573390 14.8990274 7.8882367 11.6089394 11.3924243 9.6730226 2.3994993 1.0368901 9.2125545 10.1308050 10.6859155 0.5514914 6.4535620 7.1982279 10.2800900 11.6943620 6.1837564 7.9489500 6.7133769 10.7662939 12.1028129 1.5514914 13.5031745 4.1364539 7.1895627 11.9491637 12.1632517 13.2160253 7.7841499 10.5821563 11.1129680 10.5884594 11.3954102 5.3994856 8.5571137 12.6853377 11.1976878 2.3994993 10.3578776 10.2277988 1.0368901 3.1846929 9.9600312 11.0541221 10.5528973 9.5276236 14.1303335 10.5551476 11.2775369 8.6735405 7.1364519 14.8013581 6.3170236 13.0593828 12.1658309 9.8971161 9.3183492 8.8032083 9.4095757 -0.267540 0.083130 0.083130 -0.532200 0.037998 0.025792 -0.574020 0.031370 0.031370 -0.884220 -0.884220 0.965660 0.223690 0.223690 0.943130 0.042949 0.042949 0.028134 -0.600940 -0.272880 0.036022 0.225690 -0.547790 -0.239910 0.339590 1.582700 -0.220150 -0.259320 0.153900 -0.549500 -0.267540 0.018597 -0.532200 0.073478 -0.565100 -0.574020 -0.574020 0.031370 0.031370 0.031370 0.044932 0.049331 -0.884220 -0.255210 -0.255210 -0.255210 -0.234410 0.223690 0.223690 -0.579740 0.042949 0.028134 -0.567940 -0.566290 -0.255090 0.036022 -0.561710 -0.547990 -0.547790 -0.239910 -0.313940 -0.548790 -0.259320 1.211100 -0.180990 -0.227170 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 0.000 -0.250 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 0.000 -0.250 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 9.0875421 13.3611769 8.7063071 9.8716127 2.8734195 10.6389520 2.3170146 0.5514914 8.1167816 7.1808460 NA 9.2678834 1.0368901 10.6135352 9.9806866 0.5514914 10.1706086 10.6560878 7.5010243 7.3818457 9.3981077 8.0687648 10.7951391 3.7214164 7.6992025 9.7658082 3.7214164 NA 10.1859371 1.6889860 13.3277576 11.8700319 7.5827080 10.2973315 11.0732858 9.0914232 4.1837564 2.2295572 0.2295879 0.5514914 9.2636723 7.8516129 9.9739744 6.1364519 8.4935461 6.0750512 9.6405423 7.8877726 9.4125760 -1.7705351 11.6537273 3.1837564 3.8442752 10.0161247 5.7901230 4.6889916 9.4851798 10.1194451 5.6218790 0.8145094 13.7617038 -0.1854086 9.8652792 -1.7705351 6.5241812 5.5056845 8.3932107 8.2889053 12.430303 5.737357 8.909041 11.706560 10.354377 10.086765 12.494517 12.474074 9.434132 11.438710 13.248109 12.068076 10.130805 8.712369 2.688986 8.288905 10.735869 11.0578959 6.4341328 9.0789660 8.2039754 8.9247893 10.8702172 7.1632522 5.4774895 10.6830889 4.4390114 -0.7705351 6.1243778 7.8639001 11.3450924 10.3950961 9.0141960 7.5056853 11.9735539 6.2295610 9.5327710 10.7418076 11.4913621 9.8359662 10.6584446 9.8761197 1.5514914 9.3106450 8.8923719 5.7452615 11.6943620 8.7531231 10.4813393 10.7662939 7.7415115 14.1798207 10.0580942 10.6205360 12.7833103 10.3073781 9.7580151 1.5514914 TCGA-AR-A24T 46 0 NA 2312 breast stage iiic t3 n3 m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma no 15 white not hispanic or latino 142.49.0 NA NA 2 4 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.337367e-07 5.562279e-08 11.0235112 7.4661850 5.9875755 11.3365275 0.6874191 10.4061551 -1.6344194 10.3868500 11.5065124 9.1287352 9.8910436 7.9802327 9.8432812 9.3809378 6.7535404 9.5852965 9.3116981 10.0228413 8.1615627 NA 9.6947587 9.8120894 9.9405893 10.1599388 10.0698588 10.7345749 5.0797664 10.7050946 0.9504684 3.1204183 8.7481469 12.7228000 12.6517918 6.8851595 12.7772325 13.9608678 9.4463404 6.5798424 4.2724114 7.4423381 8.6027330 9.3320283 8.6749994 13.1578048 2.3655246 10.3069374 13.8262667 6.3767505 8.9486055 10.9605472 7.6086969 7.8146715 -0.6344194 13.5027082 8.3064090 5.1204100 9.3989459 NA 5.8331279 10.3506533 11.0657458 9.8463131 11.2665783 9.7340294 10.0559574 5.2481667 11.5842375 9.8772755 3.8249511 8.7738526 1.5354558 10.4085502 14.8409714 7.7380619 11.3193556 11.6668762 7.9765475 0.3654686 4.3878933 8.6381528 9.4948060 11.8304515 -1.6344194 5.9728535 7.3313075 10.6818044 12.0980084 6.0590091 6.3255249 5.7492259 10.6967198 11.7589134 2.0659514 13.4817044 5.6509254 7.6323097 13.1188441 12.7627296 12.9873458 8.7042592 10.1916740 11.4073531 11.3643989 11.1105669 4.8573739 7.9783913 12.2089533 12.7946681 NA 10.2899643 9.1526091 -0.6344194 3.4363351 9.8387213 10.6199611 9.8920221 9.0590099 14.7568001 10.0093791 10.1485211 7.6851952 3.8249511 15.4544146 7.3226249 13.5911822 13.2805619 9.9306250 9.5133638 8.7263701 10.3864056 -0.41769000 0.37533000 0.37533000 0.01157900 -0.00018183 0.00434170 0.00350830 0.00212010 -0.41715000 0.00087148 0.00087148 0.00087148 -0.01526900 0.00059412 -0.41110000 0.00212010 0.00212010 -0.00370010 -0.00425750 -0.41923000 -0.00065352 0.00309180 -0.41418000 -0.00425350 -0.00425350 -0.01776400 -0.01776400 -0.01776400 0.00434170 -0.41033000 -0.41769000 -0.00646560 -0.41857000 0.00434170 0.00000000 0.00350830 0.00074937 0.00212010 -0.41715000 -0.42851000 0.00156510 0.00156510 0.00087148 -0.00269880 -0.00269880 0.00614860 0.00614860 0.00059412 0.00059412 -0.41110000 -0.41429000 -0.00370010 -0.00231580 -0.00231580 -0.41330000 -0.00065352 0.00073280 -0.41297000 -0.41418000 -0.00425350 0.00726140 -0.01776400 -0.01776400 0.00434170 -0.00217740 0.00253650 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.418 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.418 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.28587564 14.02896982 9.14606278 10.27878628 1.68746387 10.91891220 0.36546859 -0.04945693 8.43966427 9.58952457 -0.63441943 9.08919224 3.45299071 10.19683016 9.18250659 -0.63441943 8.98299044 9.75784033 8.92967237 9.24357388 9.91001890 8.07976849 11.18090619 4.09344186 8.69643972 10.05595739 3.31971908 NA 10.16156249 3.75784467 12.37910729 11.85436725 9.35775322 10.68038933 9.19841287 9.11539225 5.90468158 -0.04945693 0.68741908 0.68741908 8.15342536 7.61818799 10.60273282 4.98023099 6.51308327 6.04500386 9.75944965 6.23588786 9.73348366 NA 11.52649728 2.75783400 5.74922585 9.92732627 4.71655199 3.65092536 9.35916885 8.34280272 6.80015054 NA 13.69209282 0.36546859 9.96078043 NA 7.80431498 6.34280361 8.26940490 8.56027971 12.362791 4.705375 8.526655 12.777232 9.908071 10.613747 13.157805 12.362349 9.633480 11.192667 13.493356 10.993513 9.494806 8.480566 1.172872 7.565195 11.394983 11.515746 7.696440 8.916270 8.505074 8.435644 10.332872 7.005768 6.972853 10.159939 7.198413 5.365525 7.682936 6.298387 11.461414 9.623500 8.596744 7.055521 12.231546 5.841256 9.846313 10.798065 10.631138 10.114554 10.769068 8.916270 1.687464 8.865966 7.906484 6.192072 12.098008 8.039715 10.421832 10.696720 6.762128 13.787719 9.557816 10.258445 12.878510 10.132880 9.798065 3.365525 TCGA-AR-A24U 47 0 NA 1623 breast stage iia t1 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 142.49.0 NA NA 4 5 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 1.39057e-07 11.406587795 8.379418225 7.370787651 11.024077295 1.212382570 10.511893754 -0.009989098 10.027513071 11.565978047 7.136322654 9.943192589 7.880736944 8.266090788 10.111931281 6.904850144 9.520047382 9.500400740 10.156129227 8.045248554 8.105443420 10.038907058 10.527184528 12.153511024 10.120107731 9.307378886 10.415531791 7.259872230 10.899854227 -0.595096878 3.534285761 10.450763292 12.252746168 12.502015222 7.930524465 16.370382133 11.203677986 9.780043146 3.652933862 1.574924978 5.186361891 8.629005376 7.704211454 6.599761128 11.818631585 -1.595096878 11.195759438 10.212358614 8.089752363 8.724675849 11.095001612 9.713911426 7.159891514 -0.595096878 14.190683706 9.939792811 3.311895415 7.764753517 0.989938264 6.766947577 9.942222125 10.380135150 9.512220762 10.207116111 10.255190539 10.109771901 1.405012083 11.804682134 9.970581772 4.671791548 7.690405920 0.726918386 6.744854015 15.110609055 8.665535251 11.100449467 11.609880427 8.980542905 2.212351440 4.896857915 7.266090319 9.697900457 12.233735184 NA 6.671790133 6.860330922 10.099361488 10.680546244 6.416231737 7.812271663 5.726932006 11.180408164 11.585379047 0.405012083 14.065027420 3.690405920 7.536860304 12.400947434 13.217983136 12.820085180 6.084483147 10.398295853 11.262984683 10.321051053 11.500235850 5.250495502 7.633822057 12.440232347 8.755942755 NA 10.392622997 9.127811233 2.864433796 2.406808748 10.588328897 9.255971798 10.693004585 8.929545439 15.097864315 10.297546474 10.804281576 7.777868762 2.492468515 14.477073443 7.143096432 13.358427156 12.759666291 9.929055529 8.396525581 8.370788087 10.251187451 -0.0151910 0.3776500 0.3665300 0.0200630 0.0200630 -0.0785000 0.3148200 0.0567980 0.0567980 -0.2543100 -0.2543100 2.3979000 0.5441800 2.2886000 -0.0782780 -0.0782780 -0.0782780 -0.0822690 -0.0822690 0.1820700 0.0566550 0.0344110 -0.1330300 3.6569000 -0.2265000 -0.0327230 1.0506000 -0.0278080 0.0652260 -0.0151910 -0.0151910 -0.0634350 0.0200630 0.0576530 -0.0011087 -0.2300600 -0.1909900 0.0567980 0.0567980 0.0473970 0.0579390 0.0579390 -0.2543100 0.0000000 0.0000000 0.0000000 0.0000000 -0.2464200 -0.2464200 -0.0782780 -0.0996500 -0.0822690 -0.0822690 -0.0822690 0.1820700 0.0741210 0.0382060 -0.1948700 -0.1330300 -0.1916200 -0.0295290 -0.0327230 -0.0278080 0.0425600 -0.2430200 0.8492900 0.544 0.145 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.037 0.629 0.000 0.000 0.000 0.544 0.145 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.037 0.629 0.000 0.000 0.000 9.948035432 12.424507524 6.589878814 8.970105603 5.212359222 10.441177290 3.989965504 3.896853073 8.084483678 7.559821399 NA 9.128766904 5.034360999 11.130369910 9.214771774 1.726918386 10.334262110 10.006310228 11.040721780 8.721285154 9.117616611 7.944162693 11.264538425 3.159887479 6.920702990 10.109771901 2.928559827 -0.595096878 10.733678622 2.652922393 12.178658036 12.040268313 7.799466197 10.599760477 9.456212706 8.975808139 7.699624504 2.212351440 0.405012083 4.814396610 7.967245860 8.217180783 7.479144853 5.048859556 8.551241449 7.777868762 10.728902871 5.959591662 8.881749953 2.105443420 9.862897515 4.574931031 6.735920163 9.491916012 6.060140360 9.164891846 9.121823063 9.409224168 9.759253058 0.405012083 13.100286342 0.989938264 10.088875540 -0.009989098 8.295267979 4.554748460 8.236310835 9.693293017 9.8986689 8.1498375 9.3290738 16.3703821 10.4252891 11.4078187 11.8186316 8.9305245 8.7114870 10.9953568 13.6477312 10.7311523 9.6979005 10.0547089 -0.5950969 7.3936882 12.1535110 11.2884106 4.4493963 9.0178721 8.3693443 8.5496619 9.8985440 7.7224162 6.5749280 10.1201077 6.8396321 0.9899383 7.7822139 7.5788308 12.7464530 11.0736671 8.5364621 8.4050036 10.8489832 9.2559718 9.5122208 10.2006375 11.7183119 10.2167797 10.5271845 9.5258896 -1.5950969 9.5099693 10.4456085 9.9993282 10.6805462 7.9805429 10.5642443 11.1804082 8.0252786 13.4212896 10.4633337 10.1485759 12.4876517 10.2239851 9.3965256 4.1329223 TCGA-AR-A24V 52 0 NA 2596 breast stage iib t2 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 142.49.0 NA NA 1 2 NA NA 1 1 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 11.3989959 3.7110323 7.9938493 11.1411911 1.8697135 10.3728913 0.8697135 10.7843623 11.3929633 8.1658793 9.9081898 6.8316594 9.0521224 9.9812984 7.3985077 8.8781567 8.5782372 10.1723670 7.9921249 2.5326910 10.2069783 10.2217715 13.2272800 11.6608909 9.0603757 10.4287864 4.6066909 10.5753575 -1.7150122 1.0921398 8.9598406 11.6811027 12.6976000 8.0041542 12.6288534 12.9878039 10.4832106 4.0661236 2.2847510 8.1333883 8.3400481 9.4326064 8.6456127 12.1519477 0.6067265 10.3652500 13.0019064 0.6067265 9.4609387 10.6240588 7.7885911 3.0921228 -1.7150122 14.5290965 11.7152573 1.8697135 8.1176556 1.0921398 4.0126849 9.9159426 11.3335930 10.1935334 12.7009693 9.8911708 10.3199083 0.8697135 11.6875112 9.9227488 7.0824269 7.5015116 1.4547023 10.5362480 15.0013439 7.9241242 11.2434995 11.9032657 9.1681724 1.7442042 NA 7.9122996 9.5896873 11.3043563 -0.1302075 6.1856327 7.2476617 10.9440925 11.2656191 6.9358168 7.1795837 6.4395832 10.5503806 11.6784241 4.3932926 14.0343731 6.5279398 7.5585608 12.3692418 13.5414902 12.7584713 8.2875803 10.2232425 10.9263658 10.4679729 11.2092070 5.1427483 8.1271158 11.8954444 10.7853585 -0.1302075 10.8217412 9.7073560 0.8697135 1.8709368 9.4652964 10.2501891 9.8374346 9.3972051 15.0856023 10.6673896 10.6695493 8.2945941 6.6813706 15.5739830 6.3985077 13.0623805 11.7987398 9.3735538 9.0628427 8.0211677 9.9648217 0.00000 0.00000 0.00000 0.14935 0.14935 -0.13709 0.80247 -0.14605 -0.14679 0.72244 -0.75349 1.01840 0.14995 0.14995 0.16280 2.51300 0.14816 -0.48806 0.12800 -0.44178 -0.13005 -0.12784 -0.35099 0.53134 0.53134 0.10643 0.10643 0.10643 0.68549 0.00000 0.00000 -0.12828 0.14935 -0.13709 -0.12823 0.80247 0.80247 -0.14605 -0.14679 -0.14679 0.19786 0.14781 -0.80069 -0.13264 -0.13264 -0.13264 -0.13264 0.14995 0.14995 0.16280 -0.44825 0.12402 0.12800 0.12800 -0.44426 -0.13005 -0.12784 -0.43983 -0.35099 0.53134 -0.33318 0.10643 0.10643 0.69540 -0.12823 0.15054 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.801 0.915 -0.133 -0.133 0.000 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.801 0.915 -0.133 -0.133 0.000 8.3223126 14.4381394 9.1719861 9.9452072 3.7766199 9.7271908 -0.1302075 NA 8.1365144 9.0446537 NA 8.8295271 1.4547023 10.2847656 9.3508548 4.4140476 8.2677591 9.7731079 6.9642461 10.0860697 8.8114213 7.6489004 11.3083467 3.1916574 9.1450767 10.3199083 0.8697135 -0.1302075 10.6061300 3.0396473 12.4923900 11.9083042 8.2677591 10.6343233 10.5276419 9.2875806 5.0396517 1.0921398 -0.7152490 3.5701714 8.1396337 8.5620531 10.0321193 4.2155000 4.1347631 6.5039338 10.0583169 6.5421528 10.0747067 -1.7150122 10.2977392 6.0262335 3.8697234 9.5134880 5.9795772 2.7442042 10.1029482 9.1481776 4.7441988 1.2847510 13.5506369 -0.7152490 10.3305252 NA 8.4024088 3.5701714 8.4319706 8.6123182 14.6476093 4.7925587 8.3318892 12.6288534 9.6770829 10.1431351 12.1519477 12.0488078 9.1727478 10.3161221 13.1642531 9.8925581 9.5896873 8.8631381 -0.1302075 8.1081329 11.4175866 11.032539 7.588546 8.708932 8.626840 9.423677 9.707398 6.953651 3.744193 11.660891 6.689907 3.039647 5.964246 6.775015 11.550381 10.068582 9.464053 8.906817 12.703606 4.808328 10.193533 10.210320 11.312499 9.774613 10.311980 9.136515 NA 8.741079 7.413559 4.414048 11.265619 10.343096 10.284413 10.550381 6.816147 13.299832 10.172367 9.921843 13.406501 10.036310 9.376862 1.284751 TCGA-AR-A24W 55 0 NA 1550 breast stage iib t2 n1 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 3 white NA 142.49.0 NA NA 2 4 NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.39057e-07 0 12.1162103 9.7544753 7.2587064 11.0085881 1.7247376 10.7449363 NA 10.7134127 11.9039460 10.1270295 9.7446275 7.6994614 9.2552427 9.5695209 7.0060141 8.9428203 10.6927548 10.3443366 8.5950926 2.2552288 10.1782272 10.6019269 13.7895456 10.9708088 9.8699525 10.8565850 3.5089990 10.8522925 -1.4453620 3.1986670 8.8297636 14.8312183 12.6990000 9.1341190 12.4149200 12.9137289 10.2686191 7.0978351 4.3096928 7.2861225 9.1676715 9.9857782 8.9330978 12.1816528 2.8027309 10.3471866 12.6985051 7.1170456 9.4556698 10.8577275 9.4586849 8.2465463 -1.4453620 13.5035261 10.5634942 3.4616988 8.0325615 2.2552288 5.0466569 9.8522924 10.7569269 10.4092819 11.6292790 10.1588929 10.0406323 0.5548344 12.1545997 9.9599444 6.1695122 8.3180153 9.0345833 10.9689597 14.5641505 9.2467646 11.8956267 11.5628814 8.5205873 3.5089990 4.1397642 8.8320903 9.7284801 12.5325301 -1.4453620 4.1397642 6.4736668 10.0096163 10.8871194 8.0744391 5.5548037 4.2552439 10.7219075 12.1430492 2.7247376 13.3723363 6.0625967 8.4796154 12.6354540 11.3859123 12.9364811 7.2962702 10.2179163 10.9216716 10.9719567 11.7557016 5.3229881 7.6262654 11.6628373 11.9669759 0.5548344 9.9540810 9.5923500 1.5547853 4.1736312 9.9920349 10.7803117 9.9810677 9.1841595 15.3106686 10.5974884 10.1218084 8.7532482 4.4127815 15.5250100 8.2254591 13.4646492 13.0733947 9.7020080 9.2886656 8.3063470 10.1117305 0.0000000 0.4176900 0.4324300 0.0069435 0.0069435 -0.1358700 0.1563600 -0.0426520 -0.0426520 0.1577100 0.1577100 0.1577100 -0.1533600 -0.1533600 0.0125160 0.0125160 0.0125160 0.1396900 0.1396900 -0.1369100 0.0037465 -0.1563100 -0.0088526 -0.0088526 -0.0088526 0.1152100 0.1152100 0.1152100 0.1486000 0.0000000 -0.3038100 -0.1463400 0.0069435 -0.1358700 -0.1358700 0.1563600 0.1563600 -0.0426520 -0.0426520 -0.0426520 0.5827400 -0.1488800 0.1577100 -0.3029000 -0.3029000 0.0139110 -0.0045754 -0.1533600 -0.1533600 0.0125160 0.0125160 0.1396900 0.1396900 0.1396900 -0.1369100 0.0037465 -0.1563100 0.0768540 -0.0088526 -0.0088526 -0.1370400 0.1152100 0.1152100 0.1486000 -0.1481100 -0.1827000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.303 0.000 0.000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.303 0.000 0.000 8.6032899 12.5699567 7.7421551 10.0670496 3.6737486 10.7932078 -1.4453620 3.2552439 7.5716116 9.5957776 NA 9.1099098 4.9641953 9.9705448 9.4034260 2.3621613 10.0340780 10.1759391 12.7669194 9.5827090 9.5541688 8.3312358 11.1029024 2.7247376 9.9073983 10.0406323 6.6475606 -1.4453620 9.4781305 4.4374475 12.7927598 12.1065113 8.8688198 10.5688235 7.2690481 9.3435213 5.8946529 0.5548344 2.2552288 5.8946529 8.2448010 7.6073710 10.4601901 5.2413025 8.2316417 4.8402064 10.1098714 7.0546488 9.8957658 0.1397314 12.6233294 3.1397642 5.4251672 9.5488595 5.2649192 5.4374475 9.3565114 6.6737444 6.7247280 -1.4453620 14.2054902 0.5548344 10.4624448 NA 7.4706825 6.8901937 8.8585838 9.0183273 13.6823686 4.6422684 8.3685842 12.4149200 10.1593562 11.1743353 12.1816528 12.1734179 9.2486907 11.3441329 14.2525851 12.3691852 9.7284801 8.3262924 -0.4451656 7.8121908 11.4984167 11.571263 7.724728 9.763037 9.630282 8.160282 9.876269 5.154717 7.557618 10.970809 4.336162 3.684089 6.532083 6.800736 12.616005 10.541356 9.270765 7.117046 12.562881 6.412783 10.409282 10.133647 11.816604 9.491441 10.983425 9.304672 9.836733 8.633914 7.920907 6.959944 10.887119 7.097835 11.060629 10.721907 7.165828 14.302078 10.127503 10.508636 13.208824 9.691794 9.978969 4.046657 TCGA-AR-A24X 52 0 NA 2548 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA mixed histology (please specify) yes 0 white NA 142.49.0 NA NA 2 4 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.224912e-07 10.55457063 7.37945375 7.33625571 11.05779134 0.55924706 11.21182078 NA 10.24927253 12.17429106 10.77521190 9.57143355 7.80086044 7.24577515 9.48210670 7.29172510 9.87969903 10.54511652 9.14923777 7.10873875 2.29625182 10.28549273 9.51347081 8.77197370 11.78086165 9.46415996 10.44089833 4.83229256 10.99806642 NA -1.02561753 8.15173149 11.22727310 13.02832275 7.18863137 13.24577506 13.12310637 8.53273267 6.25043676 3.67475440 5.71577808 8.46616499 9.65730666 7.69541136 12.85475652 3.06177620 9.21152210 13.58193133 5.16413460 9.06574732 11.10841743 7.65026912 4.61816816 -0.02561753 13.53511773 10.58856174 2.29625182 8.32966316 -1.02561753 4.64673870 10.07365986 10.80205166 10.48359220 12.25334219 10.70393281 9.03635827 -0.02561753 11.58349078 10.03433238 6.58164199 8.42552309 9.36555563 11.95212859 14.73097260 8.84244023 11.83636818 11.73959815 7.50569328 1.97430904 -0.02561753 9.42655326 9.23875462 11.48927262 -1.02561753 4.97431363 7.24109844 9.56583438 11.34853646 13.02177681 5.74249673 3.22223269 10.93793063 12.34077087 1.29625182 13.54659778 5.78166658 7.54416774 13.81891974 12.84881318 13.26361051 7.72250496 10.08544776 11.32773457 10.92566963 11.32414611 5.34935112 8.46416016 12.08495846 11.90910865 0.55924706 9.75074500 9.43066643 0.55924706 1.78580162 9.38051713 11.53225432 10.49640313 9.27008107 14.80373749 10.09907963 10.10166163 8.52120664 3.22223269 15.17561278 11.06838975 13.64773155 13.28733677 10.31638676 9.66692751 8.89466500 10.77870526 0.0070826 1.2828000 1.3131000 -0.0071958 -0.0071958 -0.0110600 -0.0059522 -0.0111980 -0.0111980 -0.0057692 -0.0057692 -0.0057692 0.0038854 0.0038854 0.0058309 0.0058309 0.0024777 0.0144700 -0.0123820 -0.0084385 0.0023581 0.0115390 0.0167050 0.0167050 0.0167050 0.0255310 0.0245070 0.0245070 0.0204830 0.0070826 0.0070826 -0.0094046 -0.0071958 -0.0110600 -0.0110600 -0.0059522 -0.0059522 -0.0111980 -0.0111980 -0.0111980 -0.0083132 -0.0027605 0.0162860 0.0069435 0.0069435 0.0069435 0.0069435 0.0038854 0.0162860 0.0058309 0.0024777 -0.0063875 0.0000000 0.0000000 -0.0084385 0.0023581 0.0115390 -0.7007400 0.0167050 0.0167050 0.0083351 0.0255310 0.0245070 0.0204830 0.0083351 -0.7278200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.78166691 12.59762200 8.40894024 9.31416199 3.64277087 10.52072425 2.29625182 -0.02561753 8.51347101 6.99668024 NA 8.20072405 0.97430904 10.38793998 9.42758271 -0.02561753 8.82136933 9.34717709 10.41518116 10.15484279 9.59971948 7.29172510 10.41258414 1.55929601 9.55268466 9.03635827 7.76872821 NA 10.23228912 2.88119474 13.13094819 11.89819660 7.27351962 9.95302248 7.77844318 9.13039501 4.97431363 -1.02561753 NA 0.55924706 8.43987825 8.53655457 10.51831049 3.55927154 7.97245084 4.64673870 10.64097984 6.34063348 9.48606471 NA 9.08935567 3.43374733 3.92851245 10.00098067 6.60585283 5.40057550 8.81508992 8.20793189 7.01870649 -1.02561753 14.17260360 -1.02561753 9.73420018 NA 9.59086097 3.43374733 8.13921878 8.61274799 13.004577 5.259713 8.988332 13.245775 10.458631 11.251018 12.854757 12.006013 9.605917 11.208231 13.965169 11.297648 9.238755 7.664310 -1.025618 7.429639 11.288612 11.41310390 8.52890101 9.28037363 9.11641908 8.95380882 10.82233636 6.54416696 5.31416357 11.78086165 6.12405926 4.06177620 7.37945375 6.00497996 12.34608867 10.30074150 9.48111545 8.18132621 12.42139526 5.54416696 10.48359220 10.15359915 10.93937477 9.18498342 10.79528877 9.88570400 -0.02561753 9.36918203 7.91030214 6.74249673 11.34853646 8.37945332 10.82906354 10.93793063 7.89615315 14.56781988 10.17949438 10.57143345 13.43194942 10.67475176 9.84313465 2.67475440 TCGA-AR-A24Z 57 0 NA 2403 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white NA 142.49.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 1.668684e-07 11.2813244 4.1582643 7.4042432 11.4174643 NA 11.0451332 1.9603264 10.2235250 11.4709145 7.2608791 10.2099263 8.5982282 9.9768054 9.2833134 6.1902751 9.8098679 11.0509043 10.8181229 6.7947031 2.4578307 10.4639168 9.0402801 14.4062982 12.2251814 8.6007823 11.1227162 4.1582643 10.8835632 -2.1272106 2.3323069 7.5905384 10.6562696 12.6550340 7.3983829 11.9077469 13.5142929 8.8058148 5.3322926 1.6802343 7.0021455 8.7767439 10.4391539 7.3012218 13.3247814 3.4578307 9.7562689 13.2715389 3.0823109 9.1001530 11.8315960 7.9076610 3.8270568 NA 13.1446526 8.2071354 -1.1272106 6.9656192 0.4578569 4.2991274 10.3176181 10.4204796 9.7140332 12.3675926 10.6751764 9.3276755 -1.1272106 12.0107337 10.4115360 5.5523433 8.3445374 0.1948435 13.0171219 13.8496275 8.8863593 11.6994105 12.2813908 7.2544051 0.1948435 5.5523433 8.6202158 9.1588422 11.9178537 -1.1272106 4.9281429 6.6310854 9.8735662 10.8926264 12.4869391 6.3727084 4.5452889 10.5696122 12.3667800 1.7797640 12.8346282 5.3885615 8.0175200 12.5968429 11.2876794 13.1316121 7.8966164 10.5687428 11.4041216 10.8840369 11.6069365 4.7917255 8.5990801 12.1316488 11.3020072 -2.1272106 9.7906070 9.9426473 3.9813869 2.8021725 9.5408605 10.2282131 10.1163336 9.4003390 14.6840611 10.4994837 10.7876208 8.8212293 5.6344132 15.9770410 7.4653191 11.7006017 10.5730850 10.0737607 9.5140106 8.2193757 10.0486048 0.2961200 0.5290600 0.4079400 0.5343800 0.0468630 0.0037465 0.0088920 0.0280600 -0.0647770 -0.5436100 0.4737500 1.0780000 -0.0403450 -0.0147400 -0.5296100 2.2275000 1.5509000 0.4653600 0.4653600 -0.5658500 0.0748400 0.3499000 0.3931800 0.3931800 0.4429100 1.1967000 0.2996300 0.2996300 0.4773500 -0.0986820 -0.5300200 -0.0120240 -0.5875500 -0.0392050 0.4799300 -0.3500800 -0.3472100 -0.5973100 0.7115600 0.2622400 -0.0060990 -0.0265770 -1.1448000 -1.2929000 -1.2929000 -1.1084000 -0.0580580 -0.0147400 -0.0060904 -0.5564400 -1.1335000 0.4653600 0.4323900 0.4391900 -0.5258300 -0.5712000 -0.1162600 -0.0308130 -0.5926300 0.3931800 0.5022100 -0.0482070 0.2996300 0.3885800 0.4631400 -0.6140300 0.000 0.000 -0.530 -0.530 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 0.000 0.000 -0.530 -0.530 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 7.7616051 12.4490511 4.8386442 9.2554861 3.5452889 10.0056831 0.6802343 NA 8.1408190 7.0798762 -2.1272106 6.2770660 -0.1272106 10.7636962 10.1671956 2.2651668 6.4578241 9.3368973 8.1959169 9.5810838 10.2122054 8.6210548 10.3343415 2.2651668 9.0060043 9.3276755 0.6802343 0.6802343 10.1481135 3.1207832 12.9009839 12.9900181 7.0124134 10.7795647 12.0549459 9.5355305 6.3404679 1.4578044 -0.5422481 3.1947962 9.0034325 9.4341499 10.6988146 3.1947962 8.6992198 5.3566791 9.8572805 8.6335820 9.8840893 -1.1272106 12.3704644 2.2651668 4.0427844 9.5848128 5.9768310 1.1947805 8.1231602 8.1880117 7.5185202 -1.1272106 13.1879408 NA 10.6656523 -1.1272106 7.3033150 4.0823194 8.9911542 8.7017920 15.038040 6.861547 8.366717 11.907747 9.865446 10.535753 13.324781 13.155190 8.575900 11.551242 12.952180 9.899040 9.158842 7.532858 1.042784 7.824147 12.486997 11.0530820 9.0008563 8.4312828 9.0682341 9.9869297 10.9664166 6.1064823 9.7362739 12.2251814 3.9813869 10.8177571 8.7547406 9.3779887 9.8039688 9.8597707 7.7767436 8.0490350 12.5884487 3.9172599 9.7140332 9.6782029 11.6178009 8.6101094 10.6410463 8.4578245 NA 8.4036290 10.9130952 3.3322926 10.8926264 6.3924977 10.5521222 10.5696122 7.8994548 12.4544745 10.4524136 9.1267094 13.4199975 10.3939716 10.1190088 0.1948435 TCGA-AR-A250 58 0 NA 1708 breast stage iia t2 n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 1 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.526373e-06 4.509738e-07 12.0830060 3.1424134 6.8006282 11.6536755 -0.8575212 10.4068597 -0.8575212 10.1613127 11.2921642 8.4688464 9.8767033 7.6581172 8.8540839 9.4330120 8.1854444 9.6610701 9.7957100 10.9592007 7.9988426 4.3712382 9.7259700 9.6492204 14.9940807 10.7044209 8.6883468 11.4642042 5.8077542 10.2486528 NA 1.9497590 9.2749167 12.2292167 12.2129976 8.3185903 15.7899738 13.3200312 9.3316239 4.6815786 -0.2726458 7.5021667 8.7179564 9.4370377 8.2819685 13.0893233 -0.2726458 9.9106014 13.5887250 -1.8577826 8.8480495 11.2293826 7.8411215 8.8376453 2.8972985 14.2410072 9.4473387 1.3123167 8.6282465 0.1424788 5.0612794 9.6733110 10.3160941 9.9875150 9.9988426 10.2132089 9.8139582 0.1424788 11.5580268 10.8764915 3.2298801 7.7273793 2.3123457 10.7729117 15.0711436 8.8145860 11.2255639 11.2361647 8.7626368 1.7273977 6.3712365 7.3347095 8.9521853 10.5007935 -0.8575212 7.3322416 6.8872511 9.4988689 11.1531200 6.3950817 7.2404489 5.0250598 10.6074732 11.9307275 7.5997976 13.9073923 4.2085095 7.8635160 12.1468131 13.4115072 12.6811516 7.5997976 10.7167740 10.8547291 10.2299064 10.7797212 5.0372328 8.9537917 11.5821181 10.6284979 -0.8575212 9.9093600 8.8411218 -0.2726458 3.0998675 9.5676329 10.5315106 9.9327656 8.7478966 15.0025947 10.2295484 10.6718476 7.7008378 5.0127832 15.2662959 10.0038917 12.5927906 11.1534696 9.9473547 9.3718367 8.9513812 9.7930155 -0.597210 0.503480 0.474430 -0.046854 -0.116060 2.978800 -0.284890 0.381050 -0.608440 1.092100 -0.627790 0.192540 -0.198370 -0.198370 0.413290 0.362330 0.984940 -0.087447 0.290560 -0.200000 0.192490 -0.212680 -0.445990 3.656900 3.656900 -0.293070 0.215300 0.445960 0.339820 -0.660870 -0.607570 -0.026714 -0.046854 0.063080 0.285010 -0.284890 -0.284890 0.381050 -0.608440 -0.092478 0.124170 -0.028659 -0.609310 0.143250 0.143250 0.121610 0.121610 -0.198370 -0.198370 0.351040 -0.616810 -0.087447 0.290560 0.290560 -0.224660 -0.205480 0.084354 0.237670 -0.445990 0.569170 -0.356580 -0.293070 0.672890 0.339820 -0.488900 -0.226990 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 8.8728872 14.0916282 4.9368311 9.9364267 3.2298801 11.1236275 1.1424134 0.4643546 8.2125382 8.5185426 NA 8.5284842 -0.8575212 10.5832862 9.0849317 0.4643546 7.2896224 10.1353554 8.9352072 9.6728234 9.3002061 8.2704112 11.4741737 2.4643546 8.6452488 9.8139582 3.6342680 1.4643546 13.4191231 1.3123167 11.5827672 11.7555158 7.9481610 9.7022721 9.3903446 9.9184387 5.5686828 2.3123457 -1.8577826 0.7273542 7.9416985 9.1758399 9.7562065 2.3123457 8.8921861 6.0250598 9.9689655 6.8906096 10.0735238 NA 10.9167923 3.7273759 4.6018510 9.4089869 6.1984038 5.8218964 9.0582965 9.0605349 7.9561984 -0.2726458 13.4834493 0.4643546 10.9425081 NA 8.2205679 5.0372328 8.3938997 10.2411071 13.805781 6.495564 10.222568 15.789974 9.764011 10.681576 13.089323 12.221485 10.198377 10.834161 13.307756 8.516370 8.952185 9.374838 NA 9.564482 11.558819 11.1883473 5.6342709 8.2934335 9.5070989 9.5910495 10.8243407 6.8077529 10.0227659 10.7044209 6.6737981 0.7273542 6.9368334 9.0117486 11.8781846 10.5765239 7.9481610 9.2437362 11.2321985 6.2138799 9.9875150 10.1820216 10.7630951 9.9937757 10.4691274 9.1717042 NA 8.8853160 7.5451305 6.7534414 11.1531200 9.5185424 10.4670505 10.6074732 6.6893117 12.8761209 9.7003593 9.8402535 11.9815224 10.4223177 9.9043837 1.1424134 TCGA-AR-A251 51 0 NA 2387 breast stage iiia t2 n2 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.885312e-06 9.713281e-07 12.3596001 7.4837158 7.9084785 12.2156810 -2.4243004 11.4733576 6.0099518 9.8930183 11.6430935 7.2688096 10.3051562 9.6149275 8.4387349 10.0216310 9.0141151 9.0203380 8.6936152 9.7383438 9.9606462 5.7148747 10.5053211 10.7829475 12.0067554 9.9187865 10.8705181 9.7734612 4.8137299 12.5680685 8.4993931 4.0510588 8.9438296 11.1013332 12.3450060 6.0182670 11.3168954 10.6415805 8.7013824 4.4082159 0.5753123 10.1698484 8.7155138 10.2299592 6.3697387 5.5640092 -1.4246877 11.6489626 9.7734612 9.9923844 9.5812669 11.3274947 9.2137589 8.4129508 2.4333067 12.8077553 9.9563252 2.0988911 9.9764693 -0.4246877 4.8607245 11.6328072 10.2692456 10.8838043 9.9265384 10.3881020 9.9863044 0.1602748 12.0815067 10.9144771 5.5921311 6.9868341 0.7452804 9.5378577 14.3937680 8.8184317 12.0770981 12.2112112 9.7260224 2.2757520 NA 9.0444561 10.6256819 10.1275118 1.8232602 2.9328738 7.5907382 11.3775365 9.5262433 4.0671740 6.6441014 6.3201561 9.2304065 11.5757633 3.5976861 13.2246354 5.2263737 7.2688096 10.7823374 11.3768294 13.1274218 7.6720384 10.0273068 11.1638035 10.2494447 11.3743011 5.8745314 7.5353252 11.8713072 9.2831136 7.6306057 11.1586409 10.9760692 5.3697387 2.7456461 10.5793680 12.1561116 10.4644467 10.5389417 14.8645405 12.1458311 11.1366110 7.2998372 3.9676390 12.8996443 5.3891056 12.9642821 11.4777924 9.8333001 7.9847141 8.5163706 9.1628709 0.055943 0.043723 0.435470 -0.366910 0.813180 0.064225 0.058795 0.026514 0.417470 -0.393410 0.853240 0.983690 0.919050 0.035383 0.088113 0.029747 0.058081 -0.381230 -0.383690 -0.387050 -0.373240 0.489060 -0.010508 -0.010508 0.006109 -0.061017 1.778500 -0.464510 0.817270 0.403110 0.455810 -0.414540 -0.404840 -0.449110 -0.405730 -0.849390 -1.292900 0.462120 0.029606 -0.429420 -0.013815 0.036370 -0.390510 0.074121 -0.368270 0.442460 -0.431920 -0.392680 -0.444260 -0.871820 0.526780 -0.656400 -0.381340 -0.414320 -0.814740 -0.388580 -0.856390 -0.436800 0.392970 -0.010508 -0.870250 -0.073076 -0.464510 -0.376960 0.056940 -0.929860 0.853 0.000 0.000 0.000 -0.384 -0.384 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 0.853 0.000 0.000 0.000 -0.384 -0.384 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 8.2335344 12.4417810 3.6838424 8.6707200 4.3955016 10.8808149 1.8232602 4.9676390 9.4301914 8.0078649 2.0347439 9.2417601 1.9676482 10.8954184 9.4176734 5.8607245 9.3766273 10.0454736 7.4223802 8.3705510 8.6275992 7.3778395 10.6631174 1.6627980 9.0373141 9.9863044 1.3826673 NA 8.7798943 2.6197182 12.0699912 12.5476298 7.4472287 9.7737681 8.8029389 10.7468127 8.2433216 1.5753123 0.3827226 4.3955016 8.1222177 7.6073688 5.2964207 4.8421089 7.5226827 6.1413776 10.3262394 5.8882050 9.6877625 6.5266072 11.6430935 4.5865486 5.9062388 10.1483998 6.1395861 5.3826776 8.2290639 8.1008436 6.2548038 8.8053434 12.7907044 5.0265345 10.1320686 -0.1026821 11.5569795 5.7601997 8.7187062 9.4568195 10.761578 9.021889 8.729508 11.316895 9.729154 11.246311 5.564009 11.556712 9.677259 11.630078 13.095543 11.253483 10.625682 8.309186 5.725070 8.412162 11.928952 10.560809 5.847253 9.684827 8.931225 10.072676 8.810063 5.546867 7.280955 9.918786 7.979400 -1.424688 8.070179 8.948890 13.560276 9.919064 7.902876 6.561166 9.826214 7.098885 10.883804 10.065171 11.982923 10.801284 10.920867 10.085345 -1.424688 9.220837 7.805031 6.346813 9.526243 8.159346 9.861950 9.230406 8.254037 13.573429 11.018137 11.077285 13.237018 10.194855 9.846202 2.482203 TCGA-AR-A252 50 0 NA 2226 breast stage i t1 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 2 5 NA NA 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 2.781139e-08 11.8395537 9.3954945 7.0937355 10.7701439 0.2451305 10.8180495 0.2451305 10.7344587 11.9696264 7.4075040 9.6755651 8.5362834 9.0403404 9.3232633 6.0968606 10.0851035 9.9126677 10.9095598 8.8149682 8.2266800 9.7529071 8.3935891 14.7833621 10.4389458 10.2447602 11.0688777 8.6849435 10.6051365 6.4739314 -0.7548695 10.3772909 13.0549309 13.5958791 8.8496656 10.5565770 12.7241980 8.8300750 6.1277550 4.0780035 6.2674796 9.2750899 9.8135438 6.6417180 12.3537186 3.3325791 10.5302257 12.5138007 4.8450233 8.7369657 10.8281953 9.2908722 7.4739314 -1.7548695 13.8867692 10.2774613 4.3536338 8.0684795 -0.7548695 6.6417180 10.4275069 10.6198803 9.7573592 11.0927571 10.5072073 9.5993619 3.0000000 12.1575341 9.5805028 3.6374248 8.5659132 11.9086706 10.7266597 14.1500763 9.0681852 11.4349371 11.8232493 9.8044896 1.7045622 6.2949607 8.3961291 10.1691827 12.2312212 NA 4.6026647 7.2281058 10.7324501 11.7476957 6.2730179 8.8356996 5.4250228 10.8939194 11.9272293 1.4150555 13.8227183 4.2451153 7.3769693 12.1327139 10.0624959 13.1656049 7.4324642 10.4472363 10.8934701 10.7730488 11.5101414 5.2895062 7.7369654 12.4557838 11.1141279 -1.7548695 9.8281952 9.6255735 1.2451305 2.9472173 10.6441233 10.4853076 10.4763337 9.4367886 15.0291466 10.6100679 10.5938407 7.7469496 3.3325791 15.7639577 6.1154765 12.6466587 12.1822104 10.5004362 8.8943688 8.8653324 10.0258368 -0.1186000 0.1303600 0.1303600 0.0153080 0.0153080 -0.0557690 0.0098669 -0.1175700 -0.1175700 0.0114000 0.0114000 0.0114000 0.0114000 0.0114000 0.0104240 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1982500 0.0072217 0.0091705 -0.1532400 -0.1532400 0.8810600 -0.1220400 -0.1220400 -0.1220400 3.3987000 -0.1186000 -0.1186000 0.0000000 0.0153080 -0.0557690 -0.0557690 0.0098669 0.0098669 -0.1305500 -0.1175700 -0.1175700 0.0095883 0.0095883 0.0114000 -0.1169700 -0.1146900 -0.1146900 -0.1305700 0.0114000 0.0114000 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1119500 -0.2290800 0.0072217 0.0091705 0.0081959 -0.1532400 -0.1532400 -0.2481200 -0.1170400 -0.1220400 -0.1166500 -0.1119500 -0.1391000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 0.419 0.419 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 0.419 0.419 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 10.9168747 11.3830642 6.1876272 9.2908722 6.7731366 9.5357073 4.0000000 1.4150555 8.3071584 8.7538976 NA 8.5349814 3.7686713 10.2622688 8.8244283 0.2451305 10.8447929 9.5777085 7.5165754 9.5709801 9.6408288 8.0443941 10.7891110 3.8598205 10.3523296 9.5993619 4.8300727 -0.7548695 10.1512515 3.4545707 12.8322454 12.3096869 9.0248319 10.6204235 9.6771324 8.7198323 5.0524681 3.0000000 -0.1699070 0.2451305 7.8925707 7.6818238 10.3958118 6.8561379 8.9037436 5.4835159 10.1353767 4.8300727 10.1189411 -0.1699070 10.5130695 4.2223950 6.7086370 9.9666261 5.8553992 8.9610746 9.6147098 9.8445605 10.5954993 -1.7548695 13.4483075 2.3325647 10.4772336 NA 9.1676969 5.8375699 9.2273931 8.5385843 12.842783 5.567040 9.230243 10.556577 10.522400 10.516284 12.353719 13.423349 9.561298 11.333073 13.331041 10.178434 10.169183 8.163976 NA 8.449684 12.622459 10.761059 6.278535 9.367293 8.748938 8.297681 10.043414 8.304457 9.809262 10.438946 6.115477 3.374400 5.867165 7.761797 11.281973 11.365512 8.711699 7.938599 11.790560 9.981937 9.757359 10.758593 11.097837 9.578268 10.728424 10.129665 NA 9.779600 8.114614 9.819233 11.747696 6.780388 11.003544 10.893919 7.759195 13.831659 10.258086 11.004377 12.496743 9.482323 9.680262 4.078003 TCGA-AR-A254 50 0 NA 2213 breast stage iiia t2 n2 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 9 white not hispanic or latino 142.49.0 NA NA 1 4 NA NA 2 2 1 1 2 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6.952849e-07 1.112456e-07 11.6138817 7.1090607 7.0406437 10.5590737 NA 10.7041119 -0.7826452 10.1845032 11.6708048 11.2312974 10.0306573 7.7947057 8.1346491 10.3195808 7.3491335 9.4532912 9.4358402 10.3446265 8.1494916 6.0564817 10.2884040 10.1855838 12.7466465 10.2299015 9.6085206 10.5504322 6.5748296 10.7310045 NA 3.2616662 9.5515502 12.1226639 13.3182267 8.5504324 16.8577761 11.9235571 9.6894601 5.6519041 3.4267344 6.5704235 8.6042170 7.6456368 7.1060206 12.3706706 -1.7828934 10.0153437 12.5890536 4.6767075 9.3159669 11.4238335 6.8209027 4.2616737 NA 13.2931868 10.8202889 3.6095895 8.2927560 -0.1977654 5.4169478 9.2493226 10.0161536 9.3984293 11.5546201 9.9077115 9.5465127 0.8022346 11.8469751 10.0258390 5.5748281 8.2451828 3.1241627 9.1967022 14.6776848 8.7632838 11.3447877 12.0047714 8.7211026 2.6095895 -1.7828934 8.4083361 9.2826930 11.4397700 -0.7826452 6.9721642 6.2561955 10.6144168 11.3298793 6.7564362 7.6909827 5.9587429 10.1931249 11.8485677 1.5391836 13.6289203 3.4652040 6.7447545 12.1200289 14.4465088 12.9078752 6.6224179 9.7418187 11.5297345 10.5309110 11.1480143 4.8466337 8.1959873 11.5173434 11.7066232 -0.7826452 9.5786725 10.8157947 3.5026743 3.1798295 9.5781239 9.1196521 10.2620126 9.4273395 15.0896873 10.6690032 11.0828169 8.5626820 0.8022346 15.9285473 10.4643144 12.7871918 12.1189924 9.7015964 8.5846916 8.2887392 10.2768917 -0.32063000 0.87429000 0.70721000 0.00552810 0.00417130 -0.09022100 0.29980000 0.00125610 0.00125610 -0.33248000 -0.33248000 1.91120000 0.34666000 2.74300000 -0.00566770 -0.00566770 -0.00566770 -0.34503000 0.00333800 -0.00649690 0.00264380 0.31836000 -0.32588000 3.65690000 0.29391000 0.00347680 0.00347680 0.00347680 3.48240000 -0.32680000 -0.28963000 -0.00220880 0.01196600 -0.09022100 -0.09022100 0.29788000 0.00222740 0.00125610 0.00125610 -0.00524920 -0.00040777 -0.00040777 -0.33761000 0.00125610 0.00125610 0.00125610 0.00125610 -0.32181000 2.40550000 -0.00566770 -0.33386000 -0.31995000 0.00333800 0.00333800 -0.31037000 0.00264380 0.31836000 -0.31318000 -0.32588000 -0.30227000 -0.00165480 0.00347680 0.00347680 0.23830000 0.00514400 -0.05160100 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.702 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.298 0.298 0.000 0.000 0.000 0.000 1.573 1.906 0.000 0.000 0.069 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.702 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.298 0.298 0.000 0.000 0.000 0.000 1.573 1.906 0.000 0.000 0.069 9.3007564 13.2706089 7.2002709 9.0983909 4.3872040 10.2568814 1.3871971 0.2172307 8.4291653 9.4574720 -1.7828934 9.0079024 2.9721596 10.3965640 9.3663889 2.4652170 8.5049894 10.0608055 10.0564807 10.1988442 9.2852489 7.7427978 10.4209308 3.6767075 8.4472973 9.5465127 3.7718645 NA 11.3701955 5.1241668 12.6864736 11.8652974 8.2980947 10.4675754 9.2493226 9.5032571 7.9986367 2.0246388 -1.7828934 1.9176991 7.5988200 7.4267302 9.2066715 3.9451957 7.1121548 8.0374558 10.0623749 7.4652048 9.4657976 -1.7828934 8.8584256 3.8896974 3.7091252 9.6481476 6.8927043 6.9519864 8.9400845 9.7270519 8.7535240 -1.7828934 14.0247325 0.5392333 9.8324467 NA 8.1196519 3.5748281 7.4675754 8.3959419 13.055496 5.945198 8.416949 16.857776 9.928944 10.698824 12.370671 12.077200 9.618156 10.761517 13.657173 11.651254 9.282693 9.921181 2.304745 7.903778 12.003955 10.898296 5.817191 8.280672 9.073702 9.336866 10.048509 7.090721 4.740841 10.229902 4.124171 2.217262 6.539205 7.976316 12.761034 10.681567 9.334680 8.218685 11.158508 7.583599 9.398429 10.209861 11.399516 9.684373 10.832447 9.530160 3.889697 8.615754 8.082345 7.389704 11.329879 8.423070 10.692876 10.193125 8.187670 13.895354 10.131288 10.369562 12.790036 10.945835 9.959165 3.574828 TCGA-AR-A255 62 0 NA 1792 breast stage i t1 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 1 3 NA NA 3 3 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1.084644e-06 2.224912e-07 11.3908614 7.7022122 7.0999463 11.3955228 -1.6877995 10.9070678 -0.6880319 10.8230549 11.4210579 7.5881682 9.7724993 7.6979058 8.6112517 9.2508879 7.4413266 9.4554267 9.5318171 9.8988832 7.9862357 4.4617905 10.1992641 9.4630600 13.6916588 10.7544687 9.5141672 10.5965784 6.3995061 11.1019805 -0.1029920 5.0535111 9.0339972 12.2980633 13.1014753 8.6618775 12.8503537 13.1390884 9.2030678 5.7298953 2.0124972 7.2279230 8.8492618 9.7719874 7.9045004 12.5596002 4.0669330 10.1476992 13.3467565 5.9630949 9.2530911 11.3025021 7.8970062 7.0535100 0.3120843 13.7010698 9.6646277 2.8356007 7.3176677 1.3120262 5.1700252 10.2828685 10.6229402 10.0735948 11.7482345 9.9147424 9.7341082 1.4819705 11.5754595 10.0219889 6.2835866 7.9880007 4.9267538 10.8771456 14.4421515 8.3790881 11.6091030 11.7829565 8.7383081 -0.1029920 4.0933996 8.5800007 10.0756709 11.9774905 NA 5.3344110 6.9630949 10.0454826 11.3821645 6.2129097 7.4515952 5.1322231 10.6109652 11.6485501 2.8356007 13.3500622 5.6066643 7.6020626 12.2858305 12.9456064 13.1372011 7.5092604 10.5172258 10.8521716 10.2007753 11.1534113 5.8512018 8.0020414 12.7837822 10.6895252 NA 10.3985115 9.4316332 2.1193894 3.7523311 9.9285924 10.7216996 10.1657429 9.7544687 15.1289272 10.2068613 10.7248780 9.0876538 3.5215031 14.6638109 8.3176681 13.0497134 11.8447647 9.7918238 8.6783656 8.4087586 10.0231856 -0.3291100 0.4543100 1.5096000 -0.3460500 0.6666300 -0.3291100 0.3460300 0.3307900 -0.3473800 -0.7094200 -0.6794700 0.7895200 0.6528100 0.0125430 0.0069705 0.2972700 -0.3362700 0.0248560 0.0000000 -0.3350300 -0.2563200 0.0014137 -0.3569000 0.3078000 0.3078000 0.1422400 0.1422400 0.1422400 0.7183300 -0.3578100 -0.3291100 0.0068313 -0.3665900 -0.3291100 0.0104510 0.3460300 0.3460300 0.3307900 -0.3473800 -0.3473800 -0.3476500 -0.3460500 -0.7094200 -0.3339600 -0.3339600 -0.3339600 0.0054408 0.0125430 0.0125430 0.0069705 -0.3362700 0.0248560 -0.0036289 -0.0036289 -0.3265600 -0.2984900 -0.3316500 -0.3622500 -0.3569000 0.3078000 -0.3324600 0.1422400 0.1422400 -0.0254560 0.0047459 -0.3581500 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.256 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.689 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.003 -0.328 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.256 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.689 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.003 -0.328 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 8.9967921 13.0820363 7.9756015 9.8043974 4.0933996 10.2734932 1.4819705 NA 8.0365572 8.5516421 -0.6880319 8.3119027 5.2662393 10.5697259 9.3881910 3.1700212 9.7892958 9.5414631 8.8666323 9.9822572 9.1232575 8.2560232 10.8548336 3.8356007 8.1543938 9.7341082 4.5018658 NA 10.0781583 3.0124793 12.2036374 12.0453767 8.6979058 9.7482345 11.1973586 9.4592484 7.7632549 1.4819705 0.6339426 8.1962141 8.5552176 7.6914218 10.8842701 5.4100765 7.2921256 6.8550753 10.0505580 6.6827306 9.6613247 -1.6877995 11.2781884 3.3995129 5.1193977 9.2628108 4.7793228 4.4413241 9.7730113 8.7549870 6.4819689 -0.6880319 13.5143969 1.6339891 10.0275765 -0.6880319 8.8108926 5.4719158 7.6739874 8.8208287 12.7177999 5.6957489 8.3901943 12.8503537 10.0361310 11.5130953 12.5596002 12.4332532 8.8178551 11.4372955 13.3056453 10.8225605 10.0756709 8.7745459 0.3120843 8.0467530 11.1017809 11.366139 7.364612 8.740404 8.724613 9.311339 10.208145 7.103206 5.771476 10.754469 6.651894 3.441324 5.904501 7.830933 11.743672 10.466545 8.101088 8.117787 12.945606 6.712923 10.073595 10.442292 11.290754 10.054353 10.872376 9.394193 9.430985 8.910515 9.004511 6.425785 11.382164 8.138592 10.509005 10.610965 7.651893 13.275752 10.086831 10.301793 13.549851 10.550448 9.991963 2.119389 TCGA-AR-A256 45 1 2854 NA breast stage iia t2 n0 m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 0 white NA 142.49.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4.544428e-06 1.283541e-06 11.2164221 2.8280425 8.4898239 11.1320169 -1.7568184 10.3823150 2.3305584 10.4095604 11.6668559 9.8968243 10.2077854 8.7656650 8.0600668 9.6412928 7.5851579 10.1287798 8.5907049 10.9701530 9.6202941 2.1499747 8.7822424 9.9343907 13.5047377 9.6735359 10.1030065 10.7834537 4.4525361 11.4991299 3.3305441 2.3305584 8.0584669 12.6298217 12.6606064 6.7938309 10.8878411 11.7694604 9.9650371 6.9504428 4.9012965 7.8559517 9.0712199 11.8964884 8.6050272 4.3091762 -1.7568184 11.8595174 10.9070862 8.6797950 8.7369390 11.4753545 9.2550094 4.4525361 1.5650122 13.8549227 10.3864666 1.2430597 7.8448545 11.2353137 3.4910065 9.8678789 10.6211074 9.3031038 11.0626638 9.2668378 10.0149855 -1.7568184 11.1167198 11.0176647 3.4910065 6.4378403 1.0504669 4.1257255 14.3149857 8.5368770 11.2949721 10.9152878 9.8945838 1.8280628 -1.7568184 9.4500977 9.5795901 11.4037428 -0.7568184 5.3826361 7.6797953 11.4150421 11.3615379 3.7666482 7.4079900 5.1134463 10.7286613 12.3577205 -0.7568184 13.1551307 1.9435088 7.4155111 11.8105643 12.6625170 13.5740703 6.1439505 9.8105642 11.0737967 10.7071314 11.5430069 5.1257255 8.2074244 12.2970094 8.0260819 3.0504320 10.0342464 9.8882915 1.2430597 1.2592424 9.1454586 8.8005473 10.9851823 9.1671537 15.0122627 10.5728798 10.8552609 6.5962300 -1.7568184 10.7681148 6.9979709 13.5237455 11.6972542 9.7764131 8.3051297 8.6192090 10.3041812 1.2668000 1.9128000 0.8486900 -0.4633400 0.5218800 -0.4669600 0.0000000 -0.9672100 0.5638300 2.3747000 -0.0725410 2.0702000 0.6967100 -0.0083005 0.0686650 0.0331270 -0.4679100 -0.5141400 0.1644500 0.5539000 -0.4733200 -0.4585400 -0.4285500 -0.4285500 0.4432500 0.3886600 0.4194900 -0.0216470 0.4505400 -0.2450900 0.0345360 0.3499000 -0.4462000 -0.4810700 -0.9808300 -0.4767000 -0.2823600 -0.4102500 0.2134500 -0.4815500 -0.3560100 -0.5236900 -0.3413100 0.9667800 0.5915000 -0.0081624 -0.4658900 -0.0083005 -0.5863700 -0.4802900 -0.4386400 -0.2029900 -0.7899200 0.8948700 0.0593660 -0.4465200 -0.4706700 -0.3278500 -0.4733200 -0.4154200 -0.0084385 -0.4789200 0.4041100 0.4310800 0.0619370 -0.5315100 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.461 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 0.000 0.000 0.000 0.385 1.091 1.091 0.441 0.441 -0.482 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.461 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 0.000 0.000 0.000 0.385 1.091 1.091 0.441 0.441 -0.482 6.9504428 12.7067994 1.5650122 8.9996398 1.2430597 10.3512811 -1.7568184 1.2430597 9.0439834 9.1544754 -0.1720184 9.4282624 0.2430597 11.1636224 9.6343270 -1.7568184 6.2430826 11.2903778 5.8797082 9.1597094 9.4901032 6.6311014 11.7358129 2.0504320 9.1863309 10.0149855 0.8280628 NA 9.2487080 3.0504320 12.8487945 12.3971896 6.7548367 9.5695129 9.4123821 10.2857689 2.4129983 2.2430902 -1.7568184 -1.7568184 8.2765064 6.5377045 5.5192085 2.7025246 7.9143235 7.3278921 9.6709200 7.4054751 10.0435790 6.6818751 12.5692320 2.9435276 3.7025135 10.6957263 6.6937992 1.2430597 8.3024278 7.3411158 1.4129983 5.0244438 13.4671982 -0.1720184 10.8662791 NA 8.1855980 3.6006385 7.2088674 6.3979022 11.515904 9.172342 7.888742 10.887841 10.183397 11.543579 4.309176 11.110555 8.432908 10.401378 13.901602 13.514802 9.579590 7.440300 1.828063 8.590705 11.461647 10.0747865 6.5514222 9.1841310 8.7715377 9.0917064 9.5170829 5.9084190 3.9155113 9.6735359 10.6396883 6.8760785 6.4476552 8.7291241 12.9108049 9.6028330 8.6619900 7.1559728 9.2949722 4.9710055 9.3031038 9.9837075 11.9762047 11.5048846 10.8747153 9.5745602 -0.7568184 8.9060722 6.4029541 1.8280628 11.3615379 6.9811757 10.2007188 10.7286613 8.6269282 14.2825166 10.9684497 10.9489318 12.4930117 10.6953247 9.2501108 NA TCGA-AR-A2LE 69 0 NA 3913 breast stage i t1 n0 m0 2-10-2014 female 2001 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 167.47.0 NA NA 2 2 NA NA 1 4 3 3 NA NA 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 7 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.840005e-06 2.324249e-06 10.078600896 7.196789966 7.512817089 10.556016452 NA 11.229538416 NA 10.218704653 11.903068519 11.324108691 10.178269705 8.121238732 10.024332424 9.188176624 6.414969308 9.536276361 10.921930024 9.766955360 6.939632102 3.389429143 10.632835656 10.421283796 9.887381786 11.792142481 10.409157965 10.388361123 4.551706724 10.355768647 -1.002888279 -1.002888279 7.833167769 11.421283796 13.410480979 5.985803237 13.005721188 13.565904919 8.151935409 4.997116238 3.084574562 4.951312694 8.336967524 9.034664451 6.235522204 12.883861948 0.997111721 10.900622767 14.035436379 7.933755560 8.350396467 10.414442652 6.472851649 6.291737994 NA 12.615481199 8.410745585 2.697551439 7.172043406 NA 4.697556999 10.336967524 10.749916260 9.324670215 12.321016683 10.155727227 9.577376142 2.904002316 12.099913402 10.693215643 7.126400933 8.476897654 0.997111721 12.134268758 14.542926630 7.575754028 10.111510514 11.624423359 8.261559962 1.319039816 -1.002888279 8.350264293 9.265074667 11.920816371 1.582074221 4.974396233 7.046965725 9.188176624 11.360704728 3.167036722 5.063205226 3.697562559 10.408098721 12.259799629 1.997111721 13.648000943 5.063205226 7.718216390 12.248156031 11.673735769 12.949403723 7.589574750 9.707062797 10.993237887 10.695444506 11.701021057 5.711362745 8.223529705 12.734153538 12.303606450 -1.002888279 9.469808257 9.027784661 -0.002888279 3.805498835 10.230737161 10.057813473 10.487466954 8.791533447 14.913136876 10.465741579 10.216286062 9.824460153 1.319039816 15.963724328 6.480933959 14.235895398 10.879378394 9.832378336 9.020871906 8.687115292 10.633941451 0.0069435 0.6503800 0.6503800 -0.0045695 -0.0165200 -0.0137170 -0.0011087 -0.0047079 -0.0047079 -0.7026200 0.0230050 -0.0047079 0.0080567 0.0080567 0.0055957 0.0055957 0.0055957 0.0000000 0.0000000 0.0025651 0.0086135 0.0148880 -0.6740700 0.0161460 0.0161460 0.0297120 0.0297120 0.0256710 0.0301690 0.0069435 0.0069435 -0.0051227 -0.0045695 0.0055529 0.0033299 -0.0011087 -0.0011087 -0.0047079 -0.0047079 -0.0047079 -0.0008316 -0.0008316 -0.7026200 0.0111210 0.0111210 0.0111210 0.0111210 0.0080567 0.0080567 0.0171240 0.0133530 0.0000000 0.0000000 0.0000000 0.0025651 0.0086135 0.0193630 -0.6952300 -0.6740700 0.0161460 0.0179630 0.0297120 0.0256710 0.0036076 0.0119580 0.0397610 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 8.380821640 12.613896051 4.084583065 9.424430234 2.264656525 9.862850724 0.997111721 -0.002888279 8.191874496 6.771904061 NA 7.687115292 1.804466643 9.532392942 9.900999300 -1.002888279 8.888901206 9.660675529 10.601207340 8.520679569 10.108018379 8.167042243 11.176093531 2.697551439 8.984381430 9.577376142 3.084574562 0.582074221 10.399596660 4.423383199 14.328909185 12.096794039 8.412859415 10.636005905 7.464722988 8.780115837 2.697551439 3.167036722 1.319039816 NA 7.900999602 9.534335958 12.439283460 4.126402998 6.681655872 7.697556999 9.663341417 8.033290840 9.746986857 -1.002888279 11.731615432 2.319039816 5.300899788 9.821288645 6.251484304 3.997120756 8.822076199 7.683617862 5.167040738 1.582074221 14.744418866 1.582074221 9.722483785 NA 8.073933207 6.372156377 7.385135047 9.042877126 13.782621 4.904007 8.608142 13.005721 10.777247 10.968661 12.883862 13.917610 9.272078 11.248008 13.184933 11.927855 9.265075 7.791533 -1.002888 7.637362 12.216437 10.774372802 8.116058513 9.205351944 8.987221370 8.524594603 10.401274523 6.345845196 6.291737994 11.792142481 5.951312694 -0.002888279 6.683617862 5.351497593 12.953039782 9.977971049 7.516753488 8.578317964 12.451673834 5.336968862 9.324670215 10.051043314 10.300898187 9.718216733 10.627839627 9.779296661 -1.002888279 9.053890594 9.281178007 4.778476691 11.360704728 5.817295800 10.907760233 10.408098721 7.225936194 14.918168074 10.835927468 11.065223987 12.597495047 9.760329910 10.467776402 1.997111721 TCGA-AR-A2LH 55 1 616 NA breast stage iii t3 n3 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 29 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 6 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 11.0515506 8.3853659 6.7935825 11.0127964 2.2424196 10.2666240 0.6574571 9.3864995 11.6368705 9.6602603 9.0781073 8.2940698 7.9972952 11.0186580 7.4431698 9.2436596 10.1506335 9.6451830 7.6499114 6.3392692 10.3932833 11.6986481 10.6289888 10.6342480 9.6337707 10.2247676 7.6611973 9.6602134 NA 1.0724489 9.5881826 13.1442803 12.0756492 6.8206755 12.7110318 12.3653795 11.1542990 6.0948504 2.5319179 6.4300343 8.6816615 7.8340342 7.7163387 11.6123685 0.6574571 11.8141604 11.8864643 7.6309034 9.4786877 10.5758116 7.8340342 7.0554766 -0.9274140 15.5043313 13.9284705 2.3944044 7.8505600 -0.9274140 4.9053750 9.7607331 9.5050247 9.3227811 11.0204849 9.3977882 10.2554978 1.8798234 10.9827507 10.2660081 6.7163393 7.5842357 -0.9274140 9.1966041 15.1934496 6.7592637 10.8029529 10.3126778 9.5298637 2.7729202 5.1810071 7.9148330 8.4388052 13.8109973 -0.9274140 2.7729202 7.2273011 10.2861946 10.8248634 5.3762626 6.9913461 4.3204125 9.6337707 11.5444119 1.0724489 13.3480981 4.8538410 7.5522633 12.1238616 13.8064514 12.4235600 7.3671037 11.0230386 11.1072817 10.6279682 11.1764262 4.1599440 8.6908682 10.9619867 11.1114017 NA 10.4437149 9.1810071 2.3944044 3.2424043 9.5960447 10.7338155 9.5573057 8.4300347 15.4406993 9.9069539 9.6649398 6.9053726 2.6574342 14.9752582 10.8534325 13.0646245 12.8899661 9.8990312 10.0017412 8.0752978 10.5355013 0.0765660 0.0765660 0.0298760 -0.0879770 -0.0879770 -0.0226060 0.0444320 0.0041632 0.0041632 0.1058500 0.1058500 0.1058500 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0922130 -0.0257560 0.1111100 -0.0922130 -0.0922130 -0.0922130 -0.0176660 -0.0176660 -0.0176660 -0.0246610 0.0765660 0.0765660 -0.0204120 -0.0879770 -0.0226060 -0.0226060 0.0444320 0.0444320 0.0041632 0.0041632 0.0041632 0.0467000 0.0467000 0.1058500 0.0418830 0.0418830 0.0418830 0.0418830 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0580580 -0.0922130 -0.0257560 0.1111100 -0.0992090 -0.0922130 -0.0922130 0.1084400 -0.0176660 -0.0176660 -0.0246610 -0.0263040 -0.0221950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 10.07950998 11.84190741 5.35788625 9.31208131 5.94284758 11.20047707 6.08370908 -0.92741395 9.20047713 9.63663223 -0.92741395 7.94592660 4.93046296 10.29829265 9.59015212 1.87982337 10.15928241 9.48822457 10.48187368 9.58225773 9.85157010 6.54008773 11.30340382 3.97937603 9.25114768 10.25549778 7.19660409 NA 10.75152297 3.77292023 13.03844736 12.60142516 8.53600704 9.95130002 10.65462475 9.40563802 4.43003766 1.39440439 0.07244885 2.87984297 8.58027741 10.12301172 9.56132709 6.30130230 9.28479681 7.61551488 9.90932204 7.05547659 9.41121924 NA 10.60240130 2.53191789 5.09485255 9.26238148 6.34039314 7.39441125 10.92032308 8.91797290 9.79358201 2.53191789 13.59537074 2.07248315 10.53702849 NA 7.45618683 5.85384349 7.81394982 9.22603473 10.722803 7.196604 8.443170 12.711032 10.052622 10.559820 11.612369 10.341025 9.218415 10.316252 13.396312 11.389047 8.438805 8.764226 1.394404 6.997296 11.182966 11.328691 5.813950 9.281936 8.955126 8.209474 10.178444 8.705478 7.460500 10.634248 8.544158 -0.927414 6.853842 7.862082 12.028496 10.955508 8.221391 9.201766 10.248032 8.020850 9.322781 10.430035 10.966922 10.714534 10.619377 8.653683 9.454026 10.526633 8.452966 9.092073 10.824863 5.853843 11.034656 9.633771 7.744979 13.905661 10.302503 10.398912 12.633890 10.769016 9.154632 2.657434 TCGA-AR-A2LJ 40 0 NA 1912 breast stage iiia t3 n1 mx 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 185.42.0 NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 5.562279e-08 11.3900510 7.4808774 5.6820648 11.8000617 2.8506594 8.8651768 NA 8.1447444 11.0512021 12.1026338 9.3244893 6.7688261 8.5608628 9.8736846 5.9823707 8.6865289 9.7695273 9.1957433 7.3368484 4.0486024 10.6385667 10.9221265 11.8974672 11.8000617 8.7086452 9.9817645 7.9205482 9.2867631 -1.2368434 0.7632416 8.3042979 11.0946781 12.4438904 7.5379887 16.1612017 12.1723270 11.2369070 8.6133880 5.0299873 7.9406208 7.8899055 8.1030512 8.0439722 12.4671049 1.7631991 11.3877683 13.6530379 5.0486024 10.1659256 10.1878924 8.8386805 3.1555226 NA 15.2084359 11.4968522 1.5705601 9.6343364 NA 4.0851272 8.7042488 9.4142529 8.9331262 9.7883409 8.6894973 10.5351034 2.7631991 9.7064487 10.2999341 8.2470170 7.4391585 3.8924882 10.8792202 14.7036525 5.9806263 12.4688337 9.6633133 7.6880139 2.0851187 0.7632416 8.3575261 7.3254440 10.4164942 NA 3.1555226 7.5769824 9.7433408 10.6000407 6.0486046 6.2226326 6.8400163 9.4133554 11.7188512 3.0851357 13.7549888 6.1640803 6.5897500 11.7445902 11.8808444 11.6717816 8.9281082 11.1270623 10.3283033 10.2470170 10.1778865 2.3481758 9.5689451 11.7912800 12.4897388 1.3481758 10.8618913 8.2185284 1.0851527 4.2550550 8.6685883 10.6787073 9.4034463 8.1338887 14.4330552 10.0247086 8.3158705 6.3998256 3.4636355 15.6034137 7.3216224 13.3210239 12.5923294 9.7751273 9.9902155 6.6024049 10.2791671 -0.00650500 0.42654000 0.42654000 0.00013863 0.00013863 0.00166420 -0.00539920 -0.00842210 0.00847430 0.00000000 0.00000000 -0.02477000 -0.00207840 -0.00207840 0.00180300 3.65690000 3.65690000 0.00124810 0.00124810 0.00374650 -0.01064600 0.00346870 -0.03067700 3.65690000 0.34145000 -0.01945200 -0.01945200 -0.01945200 -0.00373950 -0.00650500 -0.00650500 -0.01064600 0.00013863 -0.03408600 0.00166420 -0.00539920 -0.00539920 -0.01700800 0.00847430 0.00541390 -0.00981850 -0.00981850 0.00000000 0.00875280 0.00875280 0.00875280 0.00555960 -0.00207840 -0.00207840 -0.00251950 -0.43756000 0.00124810 0.00124810 0.00124810 0.00374650 -0.01064600 0.00346870 -0.56020000 -0.44749000 -0.01986300 0.00027593 -0.01945200 -0.01945200 -0.00373950 0.00138680 -0.00539920 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5889552 13.8380953 8.2630471 10.7663678 5.5445596 11.1414961 3.2226346 1.3481758 9.5976723 8.6850420 -0.2368434 7.0102271 4.3177888 10.2369070 9.1458252 4.4356286 8.4124576 8.8075955 12.4463056 11.5379883 9.6196034 5.9628729 10.7653130 3.5180945 9.2154425 10.5351034 4.9726559 NA 11.4407007 3.7631991 13.1931964 12.6334697 7.5608624 9.8506641 8.4178373 10.1113762 2.4636486 3.2867629 1.0851527 2.2226191 9.7862626 11.0848476 9.5511038 5.4356253 7.0387676 8.3158705 9.8957010 5.0851314 9.5632922 NA 10.8211930 1.9331194 3.1555226 9.4888827 6.8875289 5.0669804 9.5559915 9.3023602 9.1207532 5.2867629 14.4173897 NA 11.1058316 -1.2368434 7.7115686 6.0578228 7.7260976 9.8486738 15.852436 5.962873 8.208216 16.161202 9.904031 10.745482 12.467105 10.886999 12.028599 9.804860 12.916357 11.173918 7.325444 9.491122 2.463649 7.989614 9.305266 11.3013902 4.4636421 8.6164952 8.7159424 7.4705605 10.0046423 8.0555227 6.9281085 11.8000617 8.8034909 3.2867629 8.4016373 6.6379985 10.7372573 10.2857828 8.5608628 10.1333438 6.4566879 6.3779115 8.9331262 10.7515309 9.8506641 9.9817645 10.3700691 5.9823707 -0.2368434 9.2924268 5.7744286 7.0439722 10.6000407 6.8612333 11.1786790 9.4133554 6.5576169 14.7020457 10.3802095 9.9829748 12.3975586 11.3275890 9.0428118 1.9331194 TCGA-AR-A2LK 62 0 NA 1304 breast stage iii t3 n2 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 5 white not hispanic or latino 167.47.0 NA NA 1 3 NA NA 1 1 3 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.952849e-07 2.503025e-07 11.7385999 5.1383025 7.7356488 10.9155862 -0.1347938 11.1287489 1.0876665 11.2160391 11.9594717 10.9149057 9.8458996 7.5424167 9.1568385 8.7691658 7.4096048 8.2388743 9.8276981 9.9487633 7.2316062 0.8652854 9.7826561 8.6235073 12.8853380 12.0473679 9.3281271 10.9898362 4.7232637 11.2502476 NA 3.7397509 8.2887503 10.6583454 12.4326856 7.1932109 12.4549352 12.9410417 8.8931899 4.1872135 1.8652854 6.0014217 8.9606811 9.0924987 7.4249800 13.3541283 4.3026919 9.1092514 13.8211760 3.7721707 9.4746597 11.9701011 7.9859540 4.0082448 0.6022668 12.7289386 11.1460567 1.8652854 7.6897122 -1.7197563 4.5091384 10.2253995 10.9503138 10.0860653 11.7348778 10.2810258 9.4514984 1.2803031 11.5301757 9.9201145 6.2286879 8.2199008 0.6022668 11.8744128 14.7331258 8.8429933 11.9704286 12.2578698 7.7741769 2.3677904 NA 9.2301482 9.8922685 12.0828379 -0.7197563 5.9945661 7.9349575 10.9262050 10.7671565 5.3137429 6.4300695 5.8727795 10.3427050 12.0903910 2.6022431 13.7748646 6.1258123 8.0217884 11.6563112 12.0558289 12.7206716 8.3664577 10.4790735 11.2595680 11.0076804 11.4139454 5.7960214 8.3558008 11.9258673 11.7876206 NA 10.6926267 10.1724848 NA 2.3686287 9.5663016 10.9885433 10.1736230 9.8478023 14.3615761 10.4973705 10.9549552 8.3477560 6.3247152 15.7279294 5.4096048 12.2432175 11.2097648 10.5332825 9.0141843 9.1068699 10.8282908 -0.346530 0.851060 0.851060 0.076937 0.048688 0.072253 0.752610 0.088258 0.088258 0.603770 1.499800 1.513700 -0.317100 -0.313190 -0.010922 3.656900 -0.483650 0.096670 0.096670 -0.379880 0.460240 -0.355900 0.482680 0.482680 0.482680 -0.298630 -0.298630 -0.298630 0.569880 -0.346530 -0.346530 -0.350550 0.080168 0.072253 0.072253 0.752610 0.752610 0.088258 0.088258 0.088258 -0.381900 -0.385930 -0.499020 -0.352590 -0.352590 -0.352590 -0.352590 -0.313190 -0.313190 -0.010922 -0.483650 0.096670 0.096670 0.096670 -0.379880 0.460240 -0.355900 -0.354070 -0.223420 0.482680 0.094346 -0.298630 -0.298630 0.569880 -0.340560 -0.297920 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 8.5223045 13.0495912 7.4897749 10.2073587 2.6595364 10.5622515 -0.7197563 NA 8.2080992 7.8194804 NA 8.3217067 1.6022668 9.9304757 9.0787934 3.9807657 7.8463755 9.7671565 8.1163720 10.6296027 9.3538404 7.8252857 10.1355794 4.0082448 10.4467985 9.4514984 1.2803031 NA 11.1547266 0.8652854 11.8057200 11.8076763 7.0150314 10.5240905 7.9842253 9.0575767 5.4300678 1.8652854 -1.7197563 7.5019088 9.1834503 8.9606811 9.9924185 2.9241759 8.2878393 7.1445073 10.3372979 6.6422655 10.2841908 NA 11.1516492 2.8038883 3.5657190 9.3047063 5.3009144 4.5091384 9.1210993 8.6201714 6.0082426 -0.1347938 13.3619298 0.6022668 10.2866476 -1.7197563 8.2489883 5.0616812 8.4664358 8.6971191 16.168949 6.193210 8.741801 12.454935 9.572643 10.936523 13.354128 11.921809 8.682268 11.301128 13.135093 11.908311 9.892269 10.020946 2.672629 8.001421 11.750345 10.883252 8.295736 8.542416 9.281730 10.383937 10.398192 6.880235 4.087675 12.047368 6.547107 1.087667 6.041874 8.496692 10.672102 9.496461 10.437984 8.691832 13.243759 5.074737 10.086065 10.603095 11.719893 9.845424 10.444600 9.163728 -1.719756 9.135984 7.628563 5.021791 10.767157 7.760102 10.055109 10.342705 7.770170 13.630570 10.128944 9.763130 12.886264 10.291549 9.477538 1.280303 TCGA-AR-A2LL 70 0 NA 224 breast stage ii t3 n0 m0 2-7-2014 female 2007 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 167.43.0 NA NA 1 3 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 5.562279e-08 10.7022290 6.2236002 6.2850008 11.6381483 1.1150998 10.2958145 0.5300707 9.8849144 11.6149224 11.1878791 10.0179541 7.1448234 9.5088246 8.8632695 8.3016037 8.8677359 10.2937414 9.0088838 7.0847032 3.0536674 11.1089584 8.5272936 9.4696933 10.8755193 8.4667519 10.4139028 4.4843122 10.6861908 NA 2.6175806 8.0595446 9.6893547 12.9572959 7.6334021 14.0637783 13.4287626 10.0847029 5.7000401 1.8520388 6.2580346 8.5881056 9.0507327 6.4726291 13.4110367 2.7780403 10.2456471 13.9725716 4.4843122 9.2080539 11.5612983 8.0058474 4.8876666 0.1150332 13.4606070 11.6030003 1.9895387 7.6490549 NA 3.3880931 9.4564101 10.4081650 9.1820626 10.6804960 9.9143581 9.7075336 -0.4699293 11.4158104 10.3810822 7.0179542 8.4444994 -1.4699293 12.1119031 14.3429932 7.7317480 11.2563322 12.0985452 10.6500278 0.5300707 NA 8.9331262 8.9267188 10.8537318 NA 4.1448214 7.5016573 10.9140883 9.9495476 4.5745072 6.5413414 6.5908101 10.3641899 11.8036182 1.1150998 13.7679588 6.2783063 7.4279598 11.8632694 12.8697553 12.8248066 8.7517010 10.5219901 11.1328129 10.6680178 10.6817649 5.1300289 8.4958982 12.3863450 12.2640826 -1.4699293 10.5583654 9.8677359 0.5300707 3.6676197 9.4835830 10.0663613 9.5510940 9.4180961 14.8260085 10.9487573 10.9389745 8.9802944 2.1150665 15.9241328 6.3502921 12.6669450 12.4803054 10.0526956 9.0078722 8.2783068 10.8808571 0.76964000 1.25920000 1.25920000 0.16640000 0.15084000 0.17106000 0.25805000 0.17935000 0.17935000 -0.54229000 0.84929000 2.28150000 0.81845000 3.65690000 -0.43105000 0.50116000 0.05850900 -0.10788000 -0.10788000 -0.67085000 -0.03081300 -0.08572200 1.23730000 1.23730000 0.52415000 0.00000000 0.00000000 0.00000000 0.38006000 -0.41080000 -0.44491000 -0.04061600 0.15084000 0.20916000 0.17106000 0.25805000 0.25805000 0.17935000 0.17935000 0.15906000 -0.04617700 -0.08638600 -0.54229000 0.09318500 0.09318500 3.65690000 -0.56157000 -0.73108000 -0.75323000 -0.43105000 -0.77897000 -0.10788000 -0.10788000 -0.10788000 -0.05563400 -0.03081300 -0.08572200 -0.74260000 -0.73885000 1.23730000 -0.06155500 0.00000000 0.00000000 0.38006000 -0.00013862 -0.05739900 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.671 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 0.000 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.671 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 0.000 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 8.4400070 12.3242252 9.5016575 9.7886800 3.4220177 10.3558678 1.7000401 NA 8.6347127 6.9563785 NA 6.4726291 3.8520388 10.1671917 9.5662876 4.7968988 8.1558231 9.3661644 9.2296865 11.3308118 9.7161788 8.1018664 9.1484995 2.0760802 9.1739701 9.7075336 2.9895387 NA 11.6587528 1.8520388 11.5614706 11.6514856 6.5131070 10.5141764 8.4035583 9.3732499 3.2305566 2.9224262 0.8520788 7.0339394 9.1874325 9.6471078 10.0012811 3.5745133 7.5976288 8.1207013 9.9315269 6.7248712 10.3358579 NA 11.3777587 1.5301207 4.7589321 9.5297759 5.6136466 4.6175747 8.3293954 8.7969004 6.9647417 -0.4699293 13.3455974 0.8520788 9.8599104 -1.4699293 8.8373148 4.1150749 7.9094923 8.6581083 13.978908 5.541341 8.527294 14.063778 9.297471 10.454927 13.411037 12.549010 9.307369 10.547270 12.985120 11.341288 8.926719 9.678591 2.617581 7.593509 11.445246 10.5009390 8.1374441 8.4142844 9.0209649 9.8126234 9.6896259 5.9895455 4.9224310 10.8755193 6.4370046 0.1150332 6.4958982 6.8847603 10.6255111 9.9024350 9.4784813 8.9384437 12.1502193 5.3630028 9.1820626 10.2309872 12.2971605 9.0259689 9.8497862 8.1337402 NA 8.6742241 6.2316628 5.6899840 9.9495476 6.4127578 10.2527722 10.3641899 7.4784817 13.2759984 9.8062385 9.6548816 13.0412490 10.7146795 9.3566626 1.9895387 TCGA-AR-A2LM 49 0 NA 1218 breast stage ii t1 n1 m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 167.47.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 8.343418e-08 10.8767014 8.7994772 7.5005232 11.1497038 1.7432133 10.8531583 -1.7164338 10.3565798 12.4700463 10.1280908 10.0532019 8.0765676 9.1656560 9.2502828 7.3281714 9.2589087 10.5714897 9.9172266 8.1694736 0.8687658 10.8984871 10.2182053 9.9486689 11.0012395 9.7063677 10.6327820 5.7756300 11.0741237 NA 4.6236269 8.8507825 12.7283393 12.8906451 7.9473354 13.4553841 13.1883178 9.6910450 7.1906682 5.2379728 6.7635576 8.7058421 10.1576059 8.8248738 12.9507779 2.8073343 9.9894097 13.6122418 5.9632568 8.8866989 10.7821279 7.8209958 4.9131336 -1.7164338 13.5273180 9.6772642 4.8073395 7.8911075 -0.1313132 5.1039550 10.4433333 13.3098252 9.4461685 12.8836320 10.4962737 10.0214471 5.4932310 12.0473009 10.4636864 8.0667754 8.9021628 12.4111268 11.5490993 15.3438821 8.9698139 11.3659263 12.1012606 8.8659191 2.3712522 2.8687460 9.6141339 9.7478125 11.6446244 -1.7164338 4.7595127 6.8836905 10.4907916 11.5786852 13.5599017 6.2724618 4.9980240 10.4871252 11.9217606 1.9842248 13.3031074 6.5125967 7.8984871 13.1358678 13.1130541 13.2358815 8.6291825 10.5287357 11.3454860 11.1117590 11.5151485 5.7836243 8.3089169 13.0061579 13.0592332 0.8687658 10.2104439 9.0218694 1.0911243 4.1001198 10.1797312 10.1876591 10.7228290 9.0999611 14.4771101 10.0614436 9.9548760 8.9003261 3.5691751 15.5148109 9.7736252 14.8212384 13.1966666 10.4809940 10.1405918 8.9464458 10.9435881 0.00097064 0.96658000 0.96658000 -0.00581400 -0.00581400 -0.00622860 -0.00152430 -0.00761010 -0.00761010 0.00027728 0.00027728 0.00027728 -0.00138580 -0.00138580 0.00527490 0.00527490 0.00527490 -0.55607000 -0.02164700 0.01782400 -0.00429290 0.00277450 3.65690000 0.00791750 0.00791750 0.02370600 0.02370600 0.02370600 0.01712400 0.00097064 0.00097064 0.00000000 -0.00581400 -0.00622860 -0.00622860 -0.00152430 -0.00152430 -0.00761010 -0.00761010 -0.00761010 0.01698500 0.01698500 0.00027728 0.00058312 0.00058312 0.00058312 0.02104300 -0.00138580 -0.00138580 0.00527490 -0.49861000 -0.55607000 -0.00360110 -0.00360110 -0.02054900 -0.00429290 0.00277450 -0.55246000 -0.53916000 0.00791750 0.01405100 0.02370600 0.02370600 0.01712400 0.00513590 0.01670500 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3172003 13.5900170 9.1518281 10.3652607 2.5765705 10.8088086 0.2838033 NA 8.3268047 8.9058292 -0.1313132 9.1572444 3.3281758 9.5795462 9.7005748 1.8687263 9.3458235 9.8335620 12.7609031 9.3336259 9.7547157 7.9824820 10.2841295 3.9562054 9.1316175 10.0214471 4.5505621 -1.7164338 10.6244619 4.4130592 11.8675652 11.8272925 8.2350621 10.4354282 7.8229360 8.9526623 7.2724618 1.4537019 1.6056840 8.4599504 8.3909943 8.9772642 9.8752997 5.3923002 8.5659737 6.1166683 9.7406450 7.1448642 9.3632620 NA 10.9417655 4.0117014 5.1541417 9.7354469 6.1784139 3.8687361 9.5095872 7.6500996 5.6236269 -1.7164338 13.4137042 0.2838033 9.9526623 NA 8.5760988 5.1039550 8.0846771 8.4309823 12.4415190 4.6236269 8.1119139 13.4553841 9.8004622 10.4471125 12.9507779 12.7013002 9.3672566 10.8400438 13.6702797 10.4962737 9.7478125 9.4297095 -0.7161967 7.1785951 11.5963767 11.5408704 7.7287919 9.0781932 9.3103008 8.1510561 10.7064833 7.2495620 6.0184873 11.0012395 7.2581919 4.2837736 8.2233564 6.2922627 12.9967878 10.6760947 8.4036652 7.9473354 13.5974044 5.5029447 9.4461685 10.1103258 11.5229282 10.1622114 10.5564071 9.1951692 0.2838033 8.8829927 9.1487992 5.2262927 11.5786852 8.6236273 10.9115392 10.4871252 7.7756307 13.7841514 9.7173627 9.9911365 13.1121617 11.2137753 10.0810334 1.6056840 TCGA-AR-A2LN 65 0 NA 1161 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 2.781139e-07 10.8129115 9.3571556 6.7611376 11.2620053 3.4757334 10.8757612 -0.8460650 10.3497948 11.8706271 10.2733972 9.5600125 8.4182503 9.4757357 9.6029562 6.3729765 9.1747876 10.9494414 9.6968394 8.2984659 4.8817282 10.9886736 10.6511605 11.0655741 11.7585925 9.5737678 10.4467043 5.3632622 10.2746934 0.1538053 6.4484286 9.5557537 13.1405385 13.0976960 7.8438055 12.7116302 13.6663629 9.6436555 6.8680533 4.1982034 7.8226926 8.9351674 10.2746934 9.0622003 12.6502869 3.0607046 11.2943179 13.9431884 8.0606981 9.4601085 10.2412704 9.4610085 4.6132370 NA 13.9409699 11.7091109 5.4757367 8.6987720 0.1538053 5.1982034 10.4363169 9.9906469 10.2662471 12.2549626 10.3766025 10.1727033 2.8542550 11.9209575 10.7378306 8.0666968 8.0845448 4.7387678 10.2610246 15.0811689 8.2461420 11.5613409 11.3981714 8.3583787 2.3237447 1.9611788 9.0287890 9.6234493 12.2822853 NA 5.1761751 6.9611626 10.0164449 11.1025398 5.1761751 6.4847246 5.1538094 10.2629853 11.8424950 2.6132487 13.1182387 6.3337171 8.0992515 12.3827766 12.6403913 13.0452116 8.1566226 10.1488680 10.5525512 10.5443098 11.6032142 5.1761751 8.2882340 11.6727066 10.2077334 1.7387678 10.4598693 9.0071173 4.0606959 4.9632198 9.9803561 10.4246869 10.2863073 8.8714839 14.7715620 10.3796175 9.6019240 9.4252707 4.6773673 15.4675941 8.9384425 13.9372663 13.2416848 9.7740275 9.6152870 8.4779881 10.5467260 0.0093098 0.3605100 0.3605100 0.0048579 -0.0076857 -0.0070576 -0.0008316 -0.0060904 -0.0060904 0.0000000 0.0000000 0.0000000 0.0052749 0.0052749 0.0036076 0.0036076 0.0036076 -0.0011087 3.0089000 -0.0049844 0.0013868 0.0151680 0.0175440 0.0175440 0.0175440 0.0140510 0.0140510 0.0140510 0.0181030 0.0093098 0.0093098 -0.0031859 0.0048579 -0.0070576 -0.0070576 -0.0008316 -0.0008316 -0.0060904 -0.0060904 -0.0060904 -0.0011087 -0.0070416 0.0000000 0.0058309 0.0058309 0.0058309 0.0058309 0.0052749 0.0125160 0.0151680 0.0036076 -0.0011087 -0.3757200 -0.3716600 -0.0049844 0.0013868 0.0151680 -0.3725600 0.0175440 0.0175440 -0.3947500 0.0140510 0.0140510 0.0181030 0.0038854 0.0373590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7462646 13.4528725 5.9992965 10.9514691 4.9086928 10.6173320 5.6616014 3.4757334 8.3534799 9.3149394 -0.8460650 9.3458909 5.4936569 9.2557832 9.8620293 3.0607046 10.4547320 9.4123736 11.9504556 9.9070243 9.5602252 8.2779290 11.7368903 4.8262332 9.5190364 10.1727033 4.6456613 NA 10.7103136 5.2198965 13.0324333 11.9357820 8.3534799 10.3993603 8.6396370 8.7886185 5.6773701 1.7387678 1.9611788 2.9611603 8.0874984 9.6203940 10.6541516 7.0786205 7.8295179 6.0606981 9.8628915 6.5884358 9.4757357 0.1538053 11.9312684 6.2830902 5.6295402 9.2569380 6.1658175 6.5201299 10.5631986 8.8935882 8.4415200 4.7083969 13.7513946 3.6773729 10.2616785 NA 7.7274549 6.4111957 7.7831639 8.9120309 12.558638 3.854245 8.045591 12.711630 10.419253 9.886823 12.650287 12.525856 9.181409 10.994979 14.044167 11.933937 9.623449 8.546125 1.738768 7.801266 11.737125 11.327797 8.535350 9.173398 8.439210 7.453015 10.624680 7.617332 7.406473 11.758592 7.176175 4.613237 7.131087 5.687525 11.669754 10.357767 7.723663 8.217203 12.657882 6.980356 10.266247 10.335581 11.689083 10.742054 10.686164 9.385029 2.854255 9.244463 8.436456 7.613239 11.102540 8.093387 10.765390 10.262985 7.515751 14.152442 9.983530 10.555754 12.794843 10.491987 10.091181 2.323745 TCGA-AR-A2LO 46 0 NA 1198 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 2.781139e-08 10.90138449 7.31487141 6.13677995 11.45844399 2.36067329 10.41269982 NA 10.03592655 11.51574640 11.06906941 9.73484525 7.71822735 9.19483022 9.72874500 5.26756576 9.26395458 9.82583348 9.50940607 8.09131531 4.03874344 10.70097040 10.35841923 11.02778673 12.15622788 9.21616672 10.39023851 7.51852727 10.36292208 -0.96128289 3.79363582 8.83153749 13.22447432 12.54827473 7.92138991 12.92024350 12.85272868 9.82909558 6.36966365 1.84611216 6.88423769 9.07492068 9.06803444 8.63493699 11.80817176 3.03875222 10.48892737 13.30252979 6.55444764 9.29495588 10.91718125 8.64607731 7.02743165 0.03871711 13.86127961 10.88226781 4.03874344 8.74091980 2.49817426 5.41378700 9.77006621 9.98492239 10.18658796 11.42918483 9.66445600 9.87163715 3.03875222 11.58250397 10.84891708 7.08859534 8.75127424 3.03875222 10.48324443 14.73277846 8.27119221 11.64051790 11.39602422 8.93204877 1.03871711 3.43106128 9.45448890 9.21492036 12.02049276 NA 4.32414814 7.25791579 10.56377848 10.31195988 5.54654262 6.89672837 5.08314102 10.33852748 12.11205190 4.32414814 12.91641469 5.18849588 7.40943422 12.55801478 12.36306833 12.81723497 8.22362237 10.29613501 10.89439429 10.83250081 11.28578452 5.43106463 8.75299272 11.36882367 11.67786166 -0.96128289 10.26274884 9.07629400 2.49817426 4.92456550 9.61049983 11.32703644 10.29966663 10.03168549 14.67738100 10.58949386 9.78945409 8.58371162 3.43106128 14.27348972 9.80195954 13.34309843 12.19609405 10.11154964 9.75299255 8.61239415 10.36769125 -0.29508000 0.43294000 0.43294000 -0.12797000 0.00000000 -0.15452000 0.00249690 0.00208050 -0.30215000 0.20015000 0.20015000 0.20015000 0.02174400 -0.29768000 -0.15656000 -0.15656000 -0.15656000 0.00277450 0.00277450 -0.00332430 -0.00470790 0.00833510 0.00569190 0.00569190 0.00569190 -0.00041585 -0.00041585 -0.00041585 0.71980000 -0.28632000 -0.29508000 -0.00138580 -0.12797000 -0.15452000 -0.00678130 0.00249690 0.00249690 0.00208050 0.00208050 -0.29284000 0.00027728 0.22360000 -0.30298000 0.00416320 0.00416320 0.00416320 0.00416320 -0.29615000 -0.29296000 -0.15656000 -0.15656000 0.00277450 0.00277450 0.00277450 -0.00332430 0.00708260 0.00833510 -0.29213000 0.00569190 0.00569190 -0.00470790 -0.00041585 -0.00041585 -0.00387790 0.00597000 -0.28940000 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.139 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.139 10.0401553 12.9287263 8.2699682 10.6090772 5.3304257 10.9213901 4.1680322 0.6236796 9.4775389 9.1088681 NA 8.7454330 4.0831453 9.6915921 9.7269974 3.8967272 9.9290114 9.3538967 8.7529927 9.6996344 8.9734701 8.0045312 11.0889359 3.2086733 8.0387473 9.8716372 4.1680322 -0.9612829 10.8601225 4.8461021 12.6077720 11.6131041 8.0885959 9.9190959 7.9121912 9.2457614 5.2482008 2.3606733 1.0387171 1.3607014 8.8151802 9.1960941 9.5012494 6.0940291 8.4672746 6.1782983 10.3061190 6.2771516 9.4470768 1.8461122 11.4470769 3.8967272 4.9929451 9.8772972 6.4533908 6.5465411 9.8420710 9.0694143 8.1628686 NA 13.7030277 -0.9612829 10.3791536 NA 7.8810974 5.1472701 7.7461065 8.2236224 13.200850 5.623709 8.142035 12.920243 10.159873 10.481691 11.808172 12.438693 9.211175 10.991488 12.984374 12.565246 9.214920 8.443888 1.360701 7.638660 11.693383 11.4417592 6.9456381 8.5971680 9.2359637 9.2211414 10.3636927 8.2457614 7.4050691 12.1562279 6.0831410 4.6534556 7.3379554 7.9017871 11.7514890 10.6589669 9.2099239 8.2723666 12.2019250 7.5063528 10.1865880 10.7000799 11.3087504 10.8617162 10.9098823 8.8151802 -0.9612829 9.3091359 7.4469493 7.8461021 10.3119599 6.2285724 11.0113680 10.3385275 7.6789923 13.8005030 9.5435661 10.0443717 12.5309759 10.9091118 10.3142897 2.0387522 TCGA-AR-A2LQ 59 0 NA 1233 breast stage iib t3 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 2.781139e-08 11.2786003 8.6085513 6.2265760 11.4549135 5.5628591 10.5170555 -1.0954196 10.3150991 11.3661272 8.5321817 9.6545172 8.0339306 8.7103915 9.8869282 5.6595364 8.9572158 10.4980388 9.6925503 8.3722535 3.3640821 10.3303881 10.9643302 11.2029967 10.8783451 9.4830205 10.3879597 4.9921113 10.8398091 1.4895943 2.6050913 10.0300612 14.1079192 12.7527698 7.9921107 13.3405133 12.3206535 10.8350155 6.7311968 3.5484983 7.7842311 9.1055463 10.4384641 9.5548020 11.9060559 2.8115327 10.5792813 11.3816470 7.5045608 9.1195131 10.0795734 10.1894719 6.8588439 NA 12.9059002 9.0287691 6.1525749 8.6941813 0.9046575 6.5841282 10.4360292 10.6929582 9.5054898 11.0826900 10.1807721 10.8671823 1.2265702 12.0630996 10.5367342 6.2533767 8.4024996 11.5525558 8.8100346 15.3611626 8.5330567 11.1122722 11.5082740 7.8264887 3.4896072 3.9490399 8.5193575 9.8797791 12.9858815 NA 4.8588464 6.8761915 9.9200628 11.8377851 5.5340056 5.7501375 5.9046479 10.4664130 11.4469541 0.4896457 13.6653677 3.9490399 7.8412857 12.6675488 12.4223171 12.6230736 8.2599988 10.0550297 11.0767626 10.6514853 11.5068826 5.4592382 8.0209916 12.0558228 10.3980028 3.0745739 10.3439592 9.1796081 1.9046575 3.6084071 10.1749430 10.2175306 9.9088681 9.1969694 14.8617951 10.1364689 9.7469981 7.4124420 4.4896072 14.3844911 8.9854651 13.8423434 12.8218333 9.6958106 9.8182851 8.4630686 10.4053303 0.14102000 0.14102000 0.14102000 0.03340800 0.03340800 0.00097064 -0.00263220 0.00249690 0.00050579 -0.00263220 -0.00263220 -0.00263220 0.00000000 0.00000000 0.00097064 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.00097017 0.00235810 -0.00207840 -0.03026700 -0.03026700 -0.03026700 0.11638000 0.11638000 0.11638000 -0.00041585 -0.03578700 0.14102000 -0.00995650 0.03340800 0.00097064 0.00097064 -0.00263220 -0.00263220 0.00249690 0.00050579 0.00050579 -0.02313500 0.00166420 0.00277450 -0.00942060 -0.00470790 -0.00470790 -0.00470790 0.00000000 0.00000000 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.01560400 -0.00097017 0.00235810 -0.00207840 -0.15029000 -0.03026700 -0.03026700 0.00291330 0.11638000 0.11638000 -0.00041585 -0.00145780 -0.00386270 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.04803097 14.27369972 7.55569961 10.92944106 2.29284063 10.51197803 1.90465750 1.71202343 8.41045941 9.39349214 -1.09541957 9.75187741 4.73753535 9.82500057 9.36612722 1.22657018 10.99707452 9.70958531 11.84917675 9.67861105 9.97956524 7.78116494 11.85137126 3.85884635 8.55569922 10.86718227 4.73753535 NA 10.60161528 4.48960716 12.77105732 12.16777018 9.85301490 10.35946110 8.23780317 9.32881403 5.05439268 -1.09541957 -0.09541957 1.71202343 8.74227575 9.18541836 9.79262991 7.82052683 8.64125266 7.06451860 9.74069807 7.06955503 9.12744267 NA 12.62820200 4.29696391 6.18077246 9.30912934 5.15674447 7.27533490 9.68354611 9.49710475 9.34551680 9.07206586 13.55210614 1.71202343 10.37428953 NA 8.32038945 7.07957332 7.91027215 9.21412408 11.769414 5.858844 8.343439 13.340513 10.171434 10.757957 11.906056 11.077388 8.885444 10.866459 13.772071 11.536507 9.879779 8.630866 -1.095420 7.064519 11.966188 11.6332060 6.5981344 9.0274756 8.7641826 7.6728319 10.1170346 6.5556996 6.7248262 10.8783451 7.1854186 2.9046382 6.4745026 5.7891241 13.4734351 10.6193225 8.8500915 8.4877303 11.6081188 6.6528407 9.5054898 10.0505799 11.0556643 10.6223241 10.6163147 9.1819352 0.9046575 9.6487162 7.6284113 8.9449375 11.8377851 9.8456953 10.6150237 10.4664130 7.5230334 14.0957443 9.9060558 10.7204313 12.9108861 11.0842458 10.0720659 3.1525728 TCGA-AR-A2LR 49 0 NA 620 breast stage i t1 n0 m0 2-10-2014 female 2010 NA NA other specify yes 0 white not hispanic or latino 177.46.0 NA NA 4 1 NA NA 2 5 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.422302e-06 4.162835e-07 11.3635295 6.9575908 7.0344061 11.4921363 2.8644734 9.6956826 3.0450585 9.8425240 12.1079723 8.0996976 9.2783909 8.6388287 9.0101583 9.5658450 6.8402328 7.1174613 8.7552518 10.7729736 8.6193683 5.6158018 10.2179218 10.2001690 11.4149712 10.8531656 9.9240957 10.8783153 4.6300152 10.9947803 6.3239122 0.5425057 8.9462750 12.4881185 12.6424485 8.3943019 12.0750711 12.9363008 9.9951372 6.8524084 4.9117874 10.3029955 9.3380513 10.0984201 8.5331296 5.5575020 NA 10.8573249 6.9743985 9.2453026 9.0087992 10.4180462 9.6658120 7.5236443 -1.0424568 12.1376906 11.7633342 5.4653836 7.2149777 0.5425057 4.7904801 9.8069953 10.8716017 9.2567984 8.7633342 9.4333238 9.6175861 10.6571627 11.1758508 11.3943019 6.4251958 6.7967937 2.1275012 8.6545580 14.6706277 11.2480700 11.7366940 11.0064177 8.6906057 4.4170221 3.1275177 9.5575031 9.0608780 10.6131210 NA 5.7649459 5.5869478 11.3429135 9.6122262 7.6335475 5.4967499 5.0019823 8.9896360 12.6152437 -1.0424568 13.1738815 5.1864094 7.3796547 12.2112901 12.2764155 12.7359755 6.7967937 10.5901312 10.2653604 10.2868316 11.3074244 4.1670448 8.9589984 11.7657501 10.0026674 3.9575896 9.7024241 9.9434322 3.7124747 7.1995261 10.2237912 8.6423388 10.7315537 8.7552518 13.7259814 10.3429135 9.2220329 8.3499079 7.0236790 11.4108609 8.5942149 12.4624093 11.0313971 10.0984201 11.6357503 7.5350195 11.4200517 3.6569000 3.1572000 0.5862000 0.5813000 0.5468300 0.5915200 1.1753000 1.1488000 0.5526600 -0.7044200 3.6569000 3.6569000 1.0821000 -0.6289300 0.5388900 0.7489900 0.7489900 0.5517700 3.6569000 1.2270000 -0.0577890 0.5208300 0.5086300 -0.0754780 0.5046300 0.4241900 1.4428000 1.3355000 0.6005200 -0.0357210 0.5822000 -0.0452280 -0.0165540 -0.0346310 -0.0184900 -0.7141700 -0.0984180 0.6238800 0.5526600 0.0077783 -0.0471240 0.5886500 -0.7260400 -0.0398010 -0.0344950 -0.6713100 -0.0293110 -0.6289300 -0.6395300 0.5388900 -0.0149160 1.6407000 -0.0351760 -0.0546900 -0.0657160 -0.0452280 -0.6846900 -0.0418380 -0.0273980 -0.0754780 -0.6985800 -0.7552100 0.4321000 -0.0135400 0.5397700 0.5757600 -0.142 -0.608 0.496 0.000 0.552 0.000 0.518 0.000 -0.685 -0.615 0.000 0.000 0.000 0.000 -0.665 0.470 0.470 0.589 0.589 0.000 0.601 0.616 0.576 0.000 0.000 0.000 0.000 0.000 0.000 1.175 0.000 1.170 1.170 0.572 0.572 2.960 3.657 0.000 0.000 -0.163 -0.142 -0.608 0.496 0.000 0.552 0.000 0.518 0.000 -0.685 -0.615 0.000 0.000 0.000 0.000 -0.665 0.470 0.470 0.589 0.589 0.000 0.601 0.616 0.576 0.000 0.000 0.000 0.000 0.000 0.000 1.175 0.000 1.170 1.170 0.572 0.572 2.960 3.657 0.000 0.000 -0.163 8.9103315 13.5014075 6.1073385 11.2409681 4.0019823 12.7632334 2.4170288 3.4170153 9.2716071 10.2067038 6.3754426 10.1103125 5.6718368 10.1633835 9.7099709 4.7904801 9.4077706 11.1855070 8.3499079 8.5723000 8.9393859 8.7257746 11.8710407 3.7649406 8.6649493 9.6175861 5.5869478 -1.0424568 10.2918636 6.2885081 12.9297624 11.9994205 8.7422252 9.3007760 9.4723044 10.7145636 7.2055176 6.6300152 -1.0424568 3.9117874 8.9015702 9.2693385 5.8155703 7.2149777 8.0352604 5.5121795 10.1584889 5.7257739 10.9670690 -0.0424568 12.1671960 2.9575989 6.2613710 9.4200926 6.2186514 3.6014469 9.5160110 8.4811524 5.2429911 3.8155754 13.5254870 1.5425552 10.6005445 1.5425552 9.3680417 6.6300152 8.4850673 8.4190699 11.731438 9.310737 8.519833 12.075071 10.398460 10.523644 5.557502 11.936301 9.450445 11.290186 13.784288 12.049026 9.060878 8.249912 6.306319 7.834107 10.194800 11.523882 4.167045 8.001985 9.936301 9.287387 10.469728 5.815570 8.055622 10.853166 9.430281 8.195995 9.664086 8.740785 12.468107 9.754441 8.299421 9.541613 9.886109 6.745493 9.256798 10.229637 10.668397 11.603924 10.590131 9.295212 2.764941 9.080573 8.824915 4.934870 9.612226 8.838704 11.027426 8.989636 8.408801 14.738899 10.198978 10.289627 12.588312 10.495779 9.619368 2.279531 TCGA-AR-A5QM 62 0 NA 1665 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 288.26.0 NA NA 3 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.39057e-07 10.8457865 8.7257654 6.8040071 11.7316319 0.8324445 8.9501071 -0.1674745 9.5467093 11.3599409 9.3994691 9.6755997 7.7808311 8.6072508 9.4862045 6.6904450 9.3570056 10.4430273 9.6301253 7.6526428 2.2918982 11.0714656 10.7657857 10.0229058 11.1074243 9.2031512 10.4645502 6.0612815 9.7453531 -1.1674745 2.1543888 8.2939434 11.8122463 12.5155681 7.3638456 12.6612945 13.3868129 10.7749783 7.4763201 4.2918982 7.4249212 8.0564654 10.8614059 7.2075034 12.5535630 0.8324445 10.5730879 13.6599554 5.5739319 9.3767520 10.4613649 8.1965987 7.1767596 0.8324445 14.8414165 12.2226328 2.2918982 8.1408027 NA 5.6526414 10.0774222 10.1527002 9.3754956 11.0916186 9.6621866 10.0492097 2.5329154 11.1825743 10.7855690 7.7423566 8.4618203 4.1178696 11.0309089 14.6328077 8.1391410 10.1498764 10.2466205 8.2754075 2.7393513 5.0023875 7.9435996 8.4023193 12.3802019 -0.1674745 2.8324647 7.3677389 9.1577693 10.3461915 8.2836750 6.2754075 5.1543928 9.5224619 11.6734384 3.6398226 13.3224372 6.3481634 6.9199264 12.3751330 11.6175075 12.3304404 7.9514048 10.3442164 9.8863896 9.7942536 10.6313406 4.2247812 9.3343010 11.0191971 10.9212521 -1.1674745 10.2188653 8.6023017 -1.1674745 3.4186217 9.5101834 9.7749784 9.1167097 9.0296806 14.9539164 9.8104592 8.8296435 8.5346363 4.5873530 15.3984287 9.2439749 13.7048020 12.4400253 9.9132814 9.6997427 7.5637828 10.6470543 0.0000000 0.8065500 0.8065500 -0.0041546 -0.0041546 0.0036076 0.8516600 -0.0126770 -0.0013858 -0.0096806 -0.0096806 -0.0096806 -0.0284910 -0.0143660 -0.0096015 -0.0096015 -0.0096015 0.3918100 0.3918100 -0.4035100 0.6780800 -0.0356380 0.7817600 -0.0529360 -0.0529360 0.3180300 0.3180300 0.3180300 0.3785800 -0.0575000 0.0000000 0.0127950 -0.0041546 0.0036076 0.0036076 0.8331400 0.8331400 -0.0126770 -0.0126770 -0.0013858 0.4790700 0.4790700 -0.0096806 -0.0077482 -0.0077482 0.8042200 0.8042200 -0.0143660 -0.0198630 -0.0327230 -0.0096015 0.3918100 0.3918100 0.3918100 -0.4035100 0.6780800 -0.0264410 -0.0548250 -0.4759600 -0.0529360 -0.4093700 0.3180300 0.3180300 0.3785800 0.7558600 -0.0526660 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 8.8589874 13.6300747 5.5189631 10.6669349 3.4174205 10.5565513 2.5329154 -0.1674745 9.3501332 7.9278609 NA 7.8408925 4.7393567 9.3422389 9.7143426 5.3560241 9.5730878 8.9847485 9.6138235 10.3989936 9.7204307 8.0636852 11.4232848 2.2918982 9.8261099 10.0492097 6.5603848 2.5329154 10.6530417 3.4174205 12.7540259 12.1702251 8.5467093 9.5145805 9.4708998 9.7105148 3.2247812 1.1543888 -0.1674745 7.4508492 9.0910299 9.7333306 9.7483432 5.7749794 7.6975473 7.9039264 9.5137023 4.6904450 9.2333433 -1.1674745 11.8471818 2.5329154 4.3870523 9.8871767 6.9825670 6.7212072 10.3721074 8.5276920 9.1600164 -1.1674745 13.5276377 0.8324445 10.5031201 NA 6.3638456 6.3638456 7.4727087 8.2795470 12.650347 5.613823 8.214007 12.661295 9.571401 10.395660 12.553563 11.808491 8.953997 10.248206 13.593080 10.881291 8.402319 8.959168 2.002378 6.843691 11.417191 11.774245 6.792466 9.192213 9.110913 7.946206 11.310139 7.185611 9.288818 11.107424 7.271256 2.154389 5.940989 8.671809 10.280580 10.673242 8.323495 8.665354 11.851881 7.324316 9.375496 11.439563 10.877541 10.759501 10.874123 8.520714 -1.167475 9.759879 7.249008 7.795360 10.346191 6.696650 11.196598 9.522462 7.550140 13.637351 10.273852 10.496467 12.656826 10.802929 9.731821 2.154389 TCGA-AR-A5QN 68 0 NA 488 breast stage iiic t2 n3 m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 10 white not hispanic or latino 296.27.0 NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.503025e-07 10.7940280 8.3077641 6.7117248 11.5926710 2.9775364 9.6901958 -1.7230865 9.4108812 11.0990701 10.0674454 9.7080720 7.4115229 7.8469527 9.5671157 7.3077637 9.5456389 10.6688775 9.6981098 8.2004244 4.5059163 10.5697061 10.5788788 9.9887638 9.5362517 9.4730841 10.0920798 5.2196100 10.2144707 -1.7230865 0.2771516 8.8908862 11.6719614 12.2979900 7.7749484 13.1468835 12.6767086 9.8340818 6.2827215 3.1350751 6.9245548 7.8991484 9.0755687 7.6258250 12.5377959 5.0050182 10.5998701 13.0220883 2.9209602 9.1880243 10.0020369 10.1206254 6.3592453 -1.7230865 14.7053877 9.7017512 3.2312942 8.0584567 -0.1379653 4.3431875 10.0143443 10.0609137 9.8904259 11.3976588 9.8109133 9.9294937 2.2770921 10.8613547 10.6376697 6.4570065 8.7937818 2.0844385 11.3903507 14.2321337 8.3280340 10.5800214 10.8264002 7.6147187 1.7365183 5.8006592 8.7355036 9.1060266 10.5306489 NA 4.3856243 7.6779761 9.1627931 10.9470891 5.7117262 5.5250259 4.0050137 10.3112080 12.0166666 6.8582969 13.3123255 5.0185630 8.2911173 12.0791083 12.3692759 12.6603961 8.5740129 10.5840130 10.6589102 10.5086601 10.3757870 4.8620595 8.6843647 11.3890476 10.7684489 0.5990321 10.2536610 8.8963999 1.7365183 3.0865120 8.5774496 9.7452118 10.2966876 8.8545256 15.5361781 10.3404919 9.1749424 8.3118959 2.9209602 14.7515950 9.7684490 12.2253728 12.0666305 9.3999249 9.0723248 8.0666306 10.7065585 -0.4629000 1.0283000 1.0283000 0.0108420 -0.0155850 -0.4767000 -0.0020784 0.0015255 0.0015255 3.6569000 -0.0127130 0.6295200 0.0179630 0.0185720 -0.0053992 -0.0053992 -0.0053992 0.0055529 0.0055529 -0.0047148 -0.0216480 0.0270760 0.0341130 0.0341130 0.0341130 0.0250100 0.0296060 0.0296060 0.0486880 -0.4239600 -0.4629000 -0.0058140 0.0108420 -0.4767000 -0.0034627 -0.0020784 -0.0020784 0.0015255 0.0015255 0.0015255 0.0850760 0.0834870 -0.6085400 0.0000000 0.0000000 0.0000000 0.0428740 0.0185720 -0.4619500 -0.0053992 -0.0053992 0.0055529 0.0055529 0.0055529 -0.0024938 -0.0216480 0.0270760 -0.5786100 0.0532370 0.0341130 0.0134920 0.0250100 0.0296060 0.0486880 -0.0022168 0.6836600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 8.4926299 13.0583029 7.0812278 10.2089424 3.6959604 11.1018567 4.2994645 0.2771516 9.0682597 9.2063553 NA 9.0828407 7.4470220 9.9064535 9.7528304 0.8620347 9.2756873 9.7694508 11.0547632 10.2876250 9.6157442 7.2883244 11.2457636 2.6694123 9.9464249 9.9294937 4.3645584 NA 10.4865503 3.7689465 12.2183279 11.9999044 8.1366318 10.3688628 10.8821133 9.4089538 4.4865471 0.8620347 -1.7230865 2.9775364 8.8954823 9.5711432 10.4121648 6.1412836 9.4049880 7.8026178 10.7259875 5.5532222 9.7272771 -1.7230865 11.1721041 3.4470237 6.4570065 9.2366933 6.3651431 3.5250290 10.3482240 8.1288460 5.6864865 0.2771516 13.1547165 1.2770921 10.3888846 NA 8.6779765 4.8469546 8.1020555 9.8945644 13.4934941 5.6434204 7.6629596 13.1468835 10.1443755 11.0183531 12.5377959 11.5867153 8.9504060 10.3448673 13.3097023 11.2714503 9.1060266 7.7138085 0.2771516 7.6564749 11.3221739 11.535368 6.271450 8.396038 9.033653 8.794766 10.396599 7.119447 8.824955 9.536252 8.307764 1.446997 7.113147 7.580467 10.284124 10.616112 8.026262 9.371834 11.152078 5.616946 9.890426 10.550601 10.588845 9.756372 10.534485 8.557868 NA 9.968980 7.090686 5.634648 10.947089 6.153613 11.475953 10.311208 7.103646 12.885814 9.929942 10.475542 13.260224 10.709378 9.706504 1.277092 TCGA-AR-A5QP 54 0 NA 622 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 1 white not hispanic or latino 296.27.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.781139e-08 11.2650915 8.5410734 6.6240526 11.3774193 1.6815392 9.8903825 -0.3185058 9.3914840 10.7620230 8.8017766 9.3793749 7.8614474 8.3127155 9.0652427 6.1893324 9.0236133 10.3680391 9.8095328 8.0630817 5.2050992 11.2625037 10.5461117 10.8964647 11.5563278 9.4985221 10.7118608 5.7149626 10.5790021 -1.3183259 3.7689994 7.8489565 12.2400788 12.7653502 7.1532135 12.7236254 12.6455183 9.9547513 8.3108949 5.2206975 7.9031257 8.6429881 9.7775948 8.4856695 12.5569039 2.8514592 10.0749290 13.2481278 6.2051012 9.2766374 10.7028655 7.4094588 4.8108235 NA 13.6684694 11.3624958 1.4888749 8.3592580 0.2665167 4.5641830 9.9553342 10.1843703 9.1942789 10.7173686 9.8595809 9.6011468 1.0034583 11.0197178 10.3289970 7.1572721 7.7848265 6.6588184 11.2601471 14.3431218 7.2533672 10.5676161 10.7108258 9.8508372 2.1409749 5.3253936 9.0202749 8.7163376 11.4043461 -1.3183259 4.0034673 7.2206975 10.0418369 10.6048660 6.8210903 5.2665017 5.4230066 9.9881699 11.8247623 0.2665167 12.9929321 5.5270297 7.8338237 11.9293177 12.3426486 12.6180845 8.7782536 10.4022103 10.7101353 10.6259102 10.0866800 4.1733913 9.0760013 11.5869255 11.9055402 NA 10.3280973 9.2456879 1.4888749 3.1370280 8.9007071 10.2613258 9.8922099 8.4727014 14.9785802 9.9853193 9.4069048 8.0522257 3.4888877 14.5436431 9.3289969 13.3802432 12.9310965 9.6342798 9.9778812 7.9966881 10.4312906 -0.0087876 0.4521500 0.7900200 -0.0271970 0.3509900 -0.0292350 0.1436200 -0.0194690 -0.0194690 0.3902300 0.3902300 0.3902300 -0.0010435 -0.0010435 -0.0058871 -0.0058871 -0.0058871 0.0310800 -0.0062911 -0.0013206 0.0014521 0.0145350 0.0257370 0.0208100 0.0208100 0.0346030 0.0346030 0.0346030 0.0152340 -0.3818500 -0.0087876 -0.0069926 -0.3931400 -0.0149890 -0.4117400 0.1436200 0.1436200 -0.0194690 -0.0194690 -0.0065781 0.3765700 0.3717700 0.3902300 0.0379900 0.0379900 0.0379900 0.1330400 -0.0010435 -0.0010435 -0.0058871 -0.0058871 -0.0062911 -0.0062911 -0.0062911 -0.0143010 0.0014521 0.0145350 -0.0056769 -0.3880100 0.0208100 -0.0057489 0.0346030 0.0346030 0.0152340 0.0070090 -0.3891200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 8.8539660 13.9760157 7.9876000 10.2332469 2.4428108 10.3312438 3.0034583 1.0034583 9.4111593 9.7913692 -1.3183259 8.1833758 4.4888941 10.1858610 9.5679973 3.3819755 9.2060803 9.0619997 10.8973748 10.4000714 9.6313433 6.6645326 10.3996432 1.8514792 10.3136250 9.6011468 4.5395187 NA 10.0824180 3.6357312 13.1382780 11.8282663 7.9055404 10.3325902 7.8688904 9.5778710 3.7259374 -1.3183259 NA 6.9007074 9.6878647 9.7156497 10.5293789 6.3325898 9.3106400 6.9294655 10.8159648 5.0390901 9.5356276 1.0034583 11.0821512 1.6815392 4.1733913 10.0537507 4.9567304 6.0738566 9.3172566 7.4791998 9.1151240 -1.3183259 13.9227769 0.6814942 10.7259327 -0.3185058 8.1813844 4.7900630 7.8004793 9.1109452 12.978112 6.402637 8.594428 12.723625 10.346559 11.043208 12.556904 11.398358 9.032433 10.251394 13.283831 11.514824 8.716338 7.439762 -1.318326 7.606351 10.760357 11.060375 5.736821 9.031373 9.035788 8.025834 10.145094 7.047861 6.375026 11.556328 7.416248 4.266502 6.846446 7.707647 10.887637 10.133265 10.450897 9.173392 9.843300 7.504906 9.194279 10.579384 11.244496 9.831286 10.353964 8.082418 -1.318326 9.687240 7.132750 7.439762 10.604866 6.934204 10.777595 9.988170 7.371536 14.383468 9.703906 10.741221 12.637552 11.233727 9.853966 1.003458 TCGA-AR-A5QQ 68 1 322 NA breast stage iiia t3 n1 m0 2-10-2014 female 2011 NA yes other specify yes 1 white not hispanic or latino 296.27.0 NA NA 2 5 NA NA 2 5 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 9.733988e-07 2.781139e-07 11.553849089 3.160581412 3.944849078 10.840839673 -1.009262921 8.742196913 NA 8.450084546 10.526900008 8.818789221 8.818789221 7.045935449 6.996276879 9.618186705 5.348204086 9.460294723 8.641704610 10.365692209 8.861017407 9.815611611 10.487506648 11.295289334 11.964350182 10.183562066 9.632704448 10.042541472 7.276054596 9.712606441 NA 0.990664477 8.588705267 12.739474616 12.489751268 8.641704610 10.906532207 8.699736580 11.269102303 5.466385672 2.312578052 7.155560020 8.433596290 7.939020245 9.412717602 6.458258952 NA 11.640358106 9.267940235 4.119937123 9.855821556 9.351499802 4.691093026 7.229057196 1.312607093 14.718977811 11.341290976 3.575614878 8.367863326 NA 6.276055527 8.928762036 9.429444613 9.084730539 9.480500825 8.682396320 10.262115875 3.312578052 9.414819036 9.606282500 5.758836147 8.429444822 NA 6.590566092 15.355932948 7.135311176 9.473460816 10.105696540 8.685880946 1.798009028 2.160565278 8.214654739 7.742196913 10.052024017 3.450089496 3.450089496 8.296714353 9.775287634 10.232040236 12.517274315 6.745539879 4.663077007 9.886985225 11.509306003 -0.009408127 13.905037957 3.575614878 7.285273665 11.301549581 14.811180851 11.966679884 6.374357901 10.925449405 10.047290535 9.396857766 9.987832308 3.382971528 9.614534281 11.042881229 9.573735602 0.575602777 10.671891216 9.132759841 1.312607093 2.100002070 8.429444822 8.568081522 9.565246436 10.304669490 15.692690201 9.894534652 8.478492984 5.400042601 1.312607093 12.370301947 7.454177539 13.641480201 12.454049474 9.122509661 9.324926009 6.804434375 9.105696409 0.0174040 0.0174040 0.0174040 0.0073609 0.0073609 -0.1304400 0.0267950 0.0000000 0.0000000 -0.1552200 0.1383500 0.1383500 -0.2397900 -0.2397900 0.0604500 0.0604500 0.0604500 -0.0024938 -0.0024938 -0.1348400 -0.0376260 0.0162860 -0.0098185 -0.0098185 -0.0098185 -0.1511900 -0.1511900 -0.1511900 0.0329860 0.0174040 0.0174040 -0.0947240 0.0073609 -0.1304400 -0.1304400 0.0267950 0.0207630 0.0000000 0.0000000 -0.1696400 0.0182470 0.0342540 -0.1552200 0.0012481 0.0012481 0.0012481 0.0012481 -0.2397900 -0.2022400 0.0604500 0.0604500 -0.0024938 -0.0024938 -0.0024938 -0.1348400 -0.0376260 0.0162860 -0.0793430 -0.2702600 -0.0098185 -0.2592600 -0.1511900 -0.1511900 0.0329860 -0.0087146 -0.0931390 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 9.087367896 15.013367399 3.078114506 10.032996187 2.651729096 10.051348716 5.861017407 2.798009028 9.853290215 9.351499802 -0.009408127 7.632054413 1.798009028 10.951378851 9.490498732 2.798009028 7.817201131 8.900545939 10.062115234 9.905785308 9.200142861 5.758836147 11.750124934 0.990664477 5.798009028 10.262115875 2.798009028 NA 10.988537925 1.312607093 13.174288216 13.061360796 6.921389913 9.421105455 10.538993105 9.903542215 2.160565278 3.450089496 NA NA 8.977916973 10.563353024 6.620010097 5.160577378 9.052806850 8.508322079 9.829856693 5.119937123 9.933167325 -0.009408127 9.045935176 4.634506147 0.990664477 9.489033280 8.302469400 7.804433729 10.142937708 9.300129217 10.396326169 11.352322500 13.984166214 -0.009408127 11.153988004 NA 9.825123838 2.160565278 7.956437146 8.522034164 12.331076 8.716871 7.933167 10.906532 9.654211 10.969363 6.458259 9.836143 9.150524 9.946303 13.722926 11.508568 7.742197 7.839276 4.745539 7.645289 9.608120 10.9188010 0.9906645 9.7108972 8.9184307 9.6132080 8.9964037 8.5083221 6.3569748 10.1835621 5.5605071 NA 9.7736511 9.4940811 12.3590229 10.1536735 8.0971636 12.0809307 6.9154659 8.2597795 9.0847305 10.5770235 9.5970581 10.7559389 10.1823289 8.3700313 NA 9.9927364 8.2298215 9.0741321 10.2320402 5.2194706 11.0309425 9.8869852 6.8610174 14.3185212 11.0216647 11.1121863 12.2552420 11.2049719 8.7151668 2.7980090 TCGA-B6-A0I1 73 1 2361 NA breast stage iia t2 n0 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 216.36.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.621532e-07 3.615481e-07 12.21961612 0.37094541 6.67020160 10.54903550 NA 10.43202674 -0.62905459 8.92749917 9.64828064 11.13835001 10.07143286 7.63543590 9.35612356 10.57586991 8.62602182 9.34684124 8.45181074 10.29134605 8.69292127 1.17836408 10.14619188 11.90432291 13.13633107 8.94842213 9.69629869 9.93704714 6.60461253 9.87680469 -0.62905459 5.52073967 6.58044702 9.71306787 11.88299283 6.67020160 12.76263953 12.28929741 11.07403158 7.30763071 4.74603323 10.85127845 10.16865470 8.24443710 6.83042520 3.65639340 -1.62905459 14.10032182 8.63777976 9.01665148 10.46989381 11.24116519 9.45779290 6.11246036 -0.04409209 15.20815257 7.93894911 2.07141946 10.39301413 NA 3.76330533 9.05486502 8.96811466 9.39613272 9.34397293 8.89749245 9.74494582 9.29728910 11.20684618 10.97020866 4.32519210 6.63308822 4.17834815 1.83041760 14.58883730 8.76026952 10.38954111 10.90845425 9.68670886 3.76330533 -0.62905459 8.57556421 7.72854503 8.95030918 -1.62905459 3.22897257 8.31350753 10.44881033 9.09635938 6.78884620 6.50027624 4.65639340 6.79305831 11.98800141 5.19117176 13.62214268 6.96718244 7.62838065 11.26883864 14.12869568 11.76666116 8.25363621 10.27374514 10.86509869 10.16622925 9.53527168 2.89454617 8.63426254 11.23033381 11.89859236 -0.04409209 11.00580424 9.81549041 5.52073967 3.07198571 9.40234977 11.54778965 8.61773376 9.54965801 15.87386381 10.59951130 9.89895881 7.87878786 -1.62905459 12.24020141 8.12754971 11.91414583 12.77467097 9.84622000 9.97924797 7.42356136 11.78250284 2.7657000 3.1053000 1.3795000 0.0112610 0.0108420 0.0190830 1.1427000 -0.0139530 0.0147490 -0.7309100 2.0452000 3.6569000 -0.0067813 1.3253000 0.0041632 -0.0591350 -0.0100940 -0.0412950 -0.0070576 -0.7282200 -0.6984800 -0.0252090 -0.0544200 0.5743400 -0.0182160 -0.0237030 0.5478800 -0.7350300 0.5397700 -0.7370500 0.0137720 -0.3556700 0.0195270 -0.7360800 -0.3541900 -0.7237600 0.0269350 -0.7629500 0.0147490 0.0071236 0.5477100 -0.0115720 -1.2929000 -0.0128510 -0.0128510 -0.0128510 -0.0128510 -0.7093500 -0.0147780 -0.0075340 -0.0100940 0.0118180 -0.0070576 -0.0070576 -0.6934200 -0.7172000 -0.7203100 -0.0559030 -0.0544200 -0.0293110 -0.0026322 -0.7194200 -0.7148800 0.5585000 1.0316000 0.0172640 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 5.19117176 12.14114083 -0.04409209 9.04253436 2.83041760 10.78699896 0.37094541 2.69291813 8.88373352 5.79725687 7.30173030 8.30615832 7.60461253 11.45762702 9.42830803 4.95595440 3.17834815 10.49317406 6.66101131 10.56759526 8.63994443 6.39889928 10.42763089 NA 9.26201730 9.74494582 2.07141946 -1.62905459 10.17875061 1.83041760 13.37942179 12.88693934 4.92558174 9.87034083 9.52960293 12.22283978 4.59981170 1.37100119 -0.62905459 NA 10.92318195 10.34001987 5.86284561 0.37094541 10.33539181 9.07576151 10.57525862 5.96345100 9.69348469 7.10908574 13.39500735 -0.62905459 3.79726205 9.86782698 9.16072233 4.17834815 8.43438845 5.04341888 6.86684865 12.35469937 14.42684751 2.45846075 11.37486240 0.95598228 9.09465412 3.79726205 9.31936029 7.66790915 9.054944 9.542170 8.451811 12.762640 8.798306 12.090810 3.656393 9.552767 8.930370 9.654660 14.485081 11.980634 7.728545 8.919815 4.500273 7.983862 10.968347 10.5518347 5.0852377 9.0548650 8.4964068 8.6985460 10.0407463 4.6747713 6.1258804 8.9484221 10.4604436 1.3710012 9.1767371 9.3028091 10.2816359 10.5121423 7.4873368 10.3557677 2.6189199 5.8139376 9.3961327 10.0920923 11.3253712 10.5886480 10.8490044 7.2133434 3.5002794 9.2917108 5.2398792 5.7108422 9.0963594 2.8304176 11.5103847 6.7930583 7.8777369 14.6673000 9.9188516 10.3992446 14.4056632 10.1580795 9.2801363 0.3709454 TCGA-B6-A0I2 45 0 NA 4361 breast stage ia t1c n0 (i-) m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 4 4 4 NA 3 2 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.283541e-06 2.775223e-07 11.7002755 0.4360552 6.3267998 11.6686492 NA 9.1131608 0.4360552 8.3063930 10.4708273 10.5665989 9.0084129 8.0702342 8.1131608 9.4085295 7.4694513 9.6000973 8.7260471 10.2636358 8.3608409 4.8510644 11.3025346 12.1872935 12.2232508 11.5272434 9.4113987 10.0804855 8.3288243 9.9764793 3.8052615 1.1729995 7.0653849 9.4350889 13.2644294 7.2347705 12.1295153 11.1645159 8.7260471 6.3509109 -1.1488007 3.2433797 8.8312056 10.5070438 7.6519658 6.5305452 -1.1488007 11.7660115 9.4463234 8.7906450 10.2678635 10.4712857 8.4639342 5.5375663 NA 16.0716161 14.0943329 1.1729995 7.1594052 NA 6.8622927 8.2217534 10.2546106 8.5092774 9.0726530 8.8552865 11.6722419 1.4360019 10.7451257 10.3974781 4.3105001 8.4657758 5.9906168 6.9009139 14.1200464 7.9764020 9.6258529 9.6576155 10.1986873 -0.1489606 NA 8.2752320 8.2064171 10.5764322 -1.1488007 4.4949212 8.0384181 11.2546106 11.4627823 5.0008113 8.3707022 6.8844893 8.2412348 12.0413536 1.8510794 12.8993825 4.2773302 6.2261058 11.2986658 12.0940911 11.9780929 5.3902240 11.1704558 11.0300419 10.3897398 10.1667816 3.3105001 8.6405996 11.8725665 3.9803453 NA 10.3707021 9.2455287 2.3104855 4.2796793 9.2433832 8.7183445 9.2919350 10.0328393 14.9063695 11.0350114 9.2304442 8.0259916 3.0209822 12.2307150 9.1155085 12.6947907 11.8434732 10.1382011 9.4275502 7.6026098 10.3982785 1.0151000 1.0151000 1.2161000 -0.0173910 0.8988900 0.0000000 0.8390300 0.8575900 -0.0048461 0.4566600 0.4566600 1.4531000 -0.0169790 -0.0169790 1.5998000 1.4548000 2.8122000 2.2059000 -0.0138720 -0.0593620 -0.0161540 -0.0245240 -0.0261670 -0.0261670 -0.0245240 0.4381700 0.4246900 0.8469200 0.8486900 -0.0286280 1.0151000 -0.0289400 -0.0173910 -0.0217840 -0.0084632 -0.0145030 -0.0145030 0.8575900 -0.0048461 -0.0250040 1.7761000 0.8764700 -0.5061900 1.6493000 1.6493000 0.4852700 0.4219300 -0.0169790 -0.0169790 -0.2013700 -0.0315520 2.2791000 -0.0175290 -0.0175290 -0.0107840 -0.0161540 -0.0245240 -0.0351840 -0.0261670 -0.0245240 0.3544700 -0.5043200 -0.0372180 0.4883700 0.8964800 0.7079500 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.000 0.000 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.000 0.000 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 9.3308461 11.9077036 NA 7.9252073 3.5515037 10.9477811 1.8510794 -0.1489606 9.9131120 7.0507378 NA 6.2940086 3.9803453 9.7669453 9.5003221 2.3104855 6.7699291 8.9252073 7.6159378 10.5097236 8.8906431 6.0702347 11.0439751 1.8510794 7.8566907 11.6722419 0.4360552 NA 10.5331826 7.7519330 13.5838693 12.1559876 6.3588604 8.9158086 10.0804855 10.9087193 5.0989922 3.2433797 -1.1488007 0.8510394 9.1763714 10.6684494 8.1271901 -1.1488007 9.2674202 6.8510656 9.9471222 3.8510694 9.8269139 -0.1489606 11.6252352 1.8510794 2.7579620 10.3874977 7.6705104 7.7758782 8.7413301 9.0653849 10.4175957 4.0605230 14.2983752 -1.1488007 10.7695565 NA 8.3145905 3.3746222 8.3186716 6.1548465 14.666760 8.279426 8.342919 12.129515 10.162247 10.973570 6.530545 6.816851 10.665648 11.098896 13.151847 12.052884 8.206417 8.691844 8.672840 6.465775 10.256739 10.971952 -1.148801 9.043359 8.712153 7.956974 10.057042 7.865086 5.537566 11.527243 11.465776 NA 5.420920 9.379803 11.742280 10.576432 7.405655 8.736762 5.949098 7.943823 8.509277 10.625853 9.984208 9.541064 10.717572 6.889985 NA 9.563662 10.069078 9.059300 11.462782 2.851059 11.312034 8.241235 7.867874 15.692999 9.862992 10.564452 12.263371 10.395064 8.994449 3.605957 TCGA-B6-A0I5 49 0 NA 4550 breast stage iib t2 n1b m0 2-10-2014 female 1988 NA NA infiltrating ductal carcinoma yes 5 white not hispanic or latino 56.63.0 5 2 2 NA NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 3.893595e-07 1.112456e-07 10.7236856 4.8637948 6.3728059 11.0360276 NA 9.6721378 NA 8.3630252 10.6052595 11.7042073 9.3957736 7.6021443 7.7255953 9.8793147 7.1689769 8.7351055 9.2374942 8.9065040 6.4852803 3.2508100 10.8895709 10.8170935 12.1695035 10.1703800 8.8340089 9.8295767 5.8912734 9.9634438 NA 6.0940904 6.3531768 10.5599575 12.4514979 7.2022718 13.6135974 12.8837039 9.9081866 7.8286887 3.7483109 5.8637923 8.2104765 9.1320195 7.5642318 12.8083356 -0.8367589 11.7544075 13.8538964 5.3332770 10.8437122 10.2692612 6.3825220 6.4852803 -0.8367589 14.0377155 9.3041825 0.1633699 8.1377673 NA 4.1633538 7.6671783 9.7844889 9.4017574 10.6622019 9.2653284 9.8463473 2.8637997 11.0115845 9.7275022 6.4487556 7.2022718 11.9263576 11.0344879 15.1559813 6.9992142 10.0135396 10.3987687 7.8179890 3.6869151 2.7483109 8.1463462 7.7632655 10.0236639 NA 5.6869151 7.2455014 8.9463510 10.6395927 8.4602691 4.8357776 4.1175454 9.6927832 11.9541085 2.7483109 13.3096828 7.6145641 7.7025114 12.9174051 13.6859956 12.0346805 7.7179416 10.3825213 10.9022894 10.1555830 10.3758491 2.3332806 9.6176520 11.3645578 10.7716076 NA 10.2186352 9.1276936 0.1633699 5.5375228 9.1548746 11.5126340 9.4591217 9.2240487 15.6495121 10.0041307 9.8895709 8.4510652 2.3332806 15.8098974 10.5104204 11.9336037 11.5448957 9.6145639 10.0135396 7.2613851 10.0860784 -0.00055444 1.16650000 1.15960000 0.00041593 -0.01006700 0.00000000 -0.00664320 -0.00484610 -0.00484610 1.08100000 1.08100000 1.08100000 -0.01243800 -0.00871460 -0.00934190 -0.00934190 -0.00934190 -0.00567570 -0.00567570 -0.00346270 0.60359000 0.57398000 -0.00304750 -0.00304750 -0.00304750 0.00527490 0.00527490 0.00527490 0.53837000 -0.00055444 -0.00055444 0.00124810 0.00041593 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00484610 -0.00484610 -0.00484610 0.52906000 0.52906000 1.08100000 -0.00207840 -0.00277070 -0.00277070 -0.00277070 -0.00871460 -0.00332430 0.01377200 -0.00934190 -0.00567570 -0.00152430 -0.00152430 -0.00346270 0.60359000 0.58399000 -0.68998000 -0.00304750 -0.00304750 -0.00140540 0.00527490 0.00527490 0.52695000 -0.00180140 0.00583090 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 8.2692614 12.8159737 6.7632655 9.2063800 3.4989274 10.8993318 3.1633538 0.1633699 9.3873544 7.4394769 0.7482895 7.1348965 2.3332806 10.4400587 9.0657279 2.7483109 7.3181713 9.2132012 10.6400989 12.5069549 9.0180964 5.7483163 10.8188835 0.9789278 8.4762359 9.8463473 8.9739243 NA 10.9958472 2.1633377 14.0617179 12.6180376 6.9315365 9.5241999 6.6552058 10.5922363 1.4852722 1.1633699 2.1633377 11.2881203 9.0732459 11.5324047 9.4017574 3.5556689 8.1220504 7.9048194 10.3715871 5.9962418 9.0505733 NA 8.4739655 NA 4.0213376 10.4471414 8.5314228 3.6227898 8.6471684 7.1520374 7.5769808 4.7179396 15.0514062 0.7482895 10.1555830 NA 8.9048197 5.5383923 8.1491948 8.3206995 12.777925 5.333277 9.213201 13.613597 10.141348 11.291669 12.808336 11.878671 8.692783 9.580857 13.216939 9.476236 7.763265 9.171781 1.163370 6.606296 11.017442 10.878886 5.250814 9.157678 9.011976 7.234816 9.451757 6.271878 8.271877 10.170380 7.748315 2.622790 7.547057 5.806631 10.876310 10.518704 9.140633 10.262043 7.529675 5.163354 9.401757 10.963444 10.220668 8.523102 10.572213 7.082216 1.970706 9.089248 6.503202 6.021333 10.639593 6.448756 10.648176 9.692783 7.218960 15.337323 10.402951 10.189876 12.696196 11.397272 9.242838 2.333281 TCGA-B6-A0I6 49 1 997 NA breast stage iia t1c n1 m0 2-10-2014 female 1990 NA NA infiltrating ductal carcinoma yes 6 black or african american not hispanic or latino 56.63.0 4 4 NA NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.00242e-06 4.727937e-07 12.8838588 3.1277488 6.1086332 11.8278161 -1.1202942 10.2351651 2.4647728 9.7616927 12.1983568 9.3453804 10.2822931 7.5272721 9.5592941 10.5032383 7.9512766 8.5091705 10.1972266 11.0516163 10.5177973 2.6871727 10.7567146 11.9470802 12.3662719 11.3794108 10.8635201 10.7420639 4.0090963 10.8473969 6.2373668 1.8798234 9.2263277 12.9066832 12.9891549 6.7986766 11.8864907 10.1813102 9.8847366 7.2152039 4.4647793 8.5557709 7.9619630 10.6782858 9.4926824 7.1086332 0.4647728 11.4565345 6.6479980 9.0597230 9.0652470 11.9896446 7.8310988 5.4344014 1.6871503 12.9628478 7.7532582 0.4647728 10.0161644 2.9672793 6.9935566 9.6026215 9.7971860 8.4053347 10.4391910 9.9652865 10.2950275 -0.1201374 11.0456631 11.1140326 5.9459026 6.5018658 2.0497353 10.8234277 15.9769202 8.6204885 10.5223170 10.7264797 8.8684988 -0.1201374 NA 9.2732044 9.1014011 12.5305292 -1.1202942 6.2285417 7.0090974 13.0467616 10.2764187 5.6999930 5.0696377 5.5663159 8.4889925 12.2302007 0.4647728 13.1711286 3.7867009 7.1881526 11.9485922 12.6284262 13.2301317 6.7746316 9.6709768 11.3799089 11.3742371 12.0673207 5.0497397 7.9672770 11.7414825 10.8727523 1.6871503 10.6770702 10.0528665 4.8798136 3.2017436 10.1289275 8.7639845 11.0494259 8.7563308 14.4823679 10.6811181 9.5182499 8.0090969 3.0497353 11.4715701 9.9532862 12.5364623 12.1036649 10.3920606 10.6517161 8.4247785 10.6026514 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.8741674 14.7535945 5.2548548 9.8281812 2.4046307 12.4762367 NA 5.0295589 9.1407334 9.4170324 -0.1201374 10.0541155 6.5733003 9.8903421 9.5863101 6.7253035 6.1182185 9.9411851 5.7253049 9.2318574 8.6608295 7.7927031 11.4815848 0.4647728 8.9922535 10.2950275 1.4647728 NA 10.1949635 3.0497353 12.5172313 12.5549992 7.1835947 9.3636297 7.9214732 10.1588441 6.2892055 1.8798234 -1.1202942 1.2017593 8.8628075 9.1755830 7.8164519 6.7624565 9.4237158 6.1652165 9.4401468 9.8833318 10.2362660 -1.1202942 13.2511142 2.0497353 6.8798136 8.7970370 6.5254723 4.5802540 8.7409009 7.0745707 5.8105511 3.5802540 13.1087078 -0.1201374 11.5259226 NA 8.0168049 4.6871671 8.0116712 8.0696383 9.670472 9.209610 8.487144 11.886491 10.946240 11.005550 7.108633 11.133661 9.591808 11.896796 12.149379 11.552239 9.101401 8.351489 8.516439 7.566314 11.103816 10.8931366 6.2107317 8.3351411 9.3606042 4.0497353 11.4617701 6.3555467 5.2892037 11.3794108 9.9791618 6.2548529 8.9922535 10.7084067 13.4960182 11.2321333 7.8046267 9.1663717 8.9091013 5.2196642 8.4053347 9.9077199 12.1541921 11.7945728 11.2436750 8.6790954 8.3289625 9.5122004 7.5164383 7.0039350 10.2764187 6.8105511 11.3041771 8.4889925 8.0968021 14.9934341 10.3935416 9.7964399 12.3767925 11.9226703 9.6077344 -0.1201374 TCGA-B6-A0I8 46 1 749 NA breast stage x t1 nx m0 2-10-2014 female 1992 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 56.63.0 6 3 NA NA 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.185488e-06 8.672572e-07 11.14015209 5.74943236 7.37845093 11.25759651 1.13053556 10.23268654 1.49308367 9.86281199 11.97118891 7.37573628 9.58585057 7.69603347 9.50990166 10.05066358 6.74523330 7.73679629 9.83689599 8.95707185 6.79890203 -0.67691821 9.97511712 9.33159707 14.10565482 11.14414512 8.61549023 10.67824422 3.64510214 11.20943661 -0.67691821 1.13053556 7.10452852 10.52804518 12.56998326 5.58995519 14.19073678 14.69577848 9.01578383 1.32319711 NA 6.25390609 7.82500582 9.80446342 7.09795521 12.94212743 2.41063960 9.15289120 13.10401574 5.26568443 9.15130505 11.21741783 6.66746499 8.83689615 NA 12.25817321 7.52284043 1.13053556 7.64058116 NA 5.09135287 10.49340646 11.89254942 9.45373897 11.07010256 10.33019569 9.41724620 -0.09187883 12.36534079 10.48744686 6.32879339 6.73255955 3.27735994 10.71521746 14.85696963 7.34836345 9.90059726 11.42924060 11.09321287 1.32319711 1.49308367 8.98939251 9.91047724 10.47228041 -1.67668758 5.19353127 7.51792523 9.41460385 9.00000704 3.68071817 3.53261619 4.32316828 9.70308824 11.70862646 5.13052320 13.10918276 5.63605033 6.86232740 11.54233694 14.69252723 12.69317467 9.27372428 11.40847491 10.73255939 10.69246312 11.02078761 5.67189626 9.30044843 12.67714227 8.87679778 3.41062603 10.38453965 9.41592553 1.78261824 3.68494214 10.07763850 9.83195354 9.41526495 9.51546134 15.51853104 10.97914628 11.17511262 8.66413115 1.49308367 15.84057641 8.26274744 11.44308221 10.23418586 9.80950062 9.46527559 8.76714793 11.01206998 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.94705010 13.04906721 6.50307677 9.37845093 NA 11.35469733 -1.67668758 NA 8.60393933 7.08472018 NA 7.53991409 1.32319711 9.68401552 9.44534930 2.02361022 7.78464793 9.64114625 8.14812724 10.82027176 9.22143729 8.30616197 10.19738135 3.07806326 8.15130480 9.41724620 2.71547609 -0.67691821 11.30312945 0.90812117 11.97746884 12.27454423 7.52038532 10.09795547 7.46271984 9.44081146 4.47291662 -0.67691821 -0.09187883 5.26568443 7.74102063 9.64171129 11.39747720 4.64509637 7.95950299 6.72830966 9.69167496 8.31752206 10.45855713 -1.67668758 10.15763949 2.57109428 4.15605678 9.49763232 5.41814271 2.41063960 9.41592553 7.54233699 8.34136849 -0.09187883 13.30923267 -1.67668758 10.46015955 NA 7.66079032 4.15605678 8.36619586 8.29901656 12.749302 3.908131 9.009669 14.190737 9.705793 10.571986 12.942127 10.734944 8.887318 11.044695 12.855220 10.271171 9.910477 8.515461 2.323168 7.817024 13.467030 10.9822724 5.7494324 8.5154613 9.2715356 8.3033081 11.1855675 5.1686581 5.9156261 11.1441451 4.2058147 3.0780633 6.1935332 7.3664691 10.1560584 9.6154901 8.5992929 8.7357384 12.2091507 4.8309651 9.4537390 11.5016777 11.6552050 9.9226164 10.8202718 9.5320124 NA 9.4703862 6.7068731 4.3231683 9.0000070 6.7025467 10.3668793 9.7030882 7.4160045 12.8100035 9.4773537 10.0671613 13.1075988 9.6137633 9.8289800 -0.6769182 TCGA-B6-A0I9 62 1 369 NA breast stage iv t3 nx m1 2-10-2014 female 1992 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 56.63.0 6 3 1 NA 1 5 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 1.418381e-06 3.059253e-07 13.12221143 3.52008275 7.01903912 11.38787317 NA 10.36731100 -0.06491748 10.17152998 11.80393970 7.49990168 9.62860411 7.02963509 8.81061051 10.34662819 6.38357816 8.97037455 10.15831443 10.55655855 7.90666095 4.32743588 10.41926868 10.46422226 14.37561867 11.16373546 11.07146746 11.35314545 5.46909475 10.55808411 -1.64972908 -0.06491748 6.84600933 11.60533080 14.23832709 8.55594803 17.57079264 12.86831600 8.13805724 2.67208584 NA 4.85795115 8.58616875 5.61693988 6.69888243 12.77287647 -1.64972908 9.43562714 13.93467680 3.20814265 9.59773209 11.45048845 6.09162156 3.99400941 -1.64972908 16.09689168 10.64190092 2.05060617 8.06440003 -0.06491748 5.03665718 10.46747309 10.20463350 9.74729441 11.75529612 10.67489773 9.79723789 -0.06491748 11.37650517 10.55564248 5.07807607 7.77011479 2.99401847 10.04494787 14.72312170 9.03135797 10.99468692 11.64707085 8.56932323 0.35015775 7.19564485 8.63902084 9.13887308 10.63179494 -1.64972908 4.37252034 7.82993516 8.67545994 10.92356512 5.11833896 5.42696915 4.82588737 11.25384825 11.79788363 4.75954469 13.32667402 6.20190434 6.51506113 11.13703685 13.32030549 12.34768700 8.61107424 11.23680387 10.86560809 10.59923549 10.97220648 5.38357643 8.76166558 11.57731930 11.53053007 1.93512025 10.75582795 9.17590853 1.52009533 3.63667102 10.62132580 11.35735714 9.68330994 9.17590853 14.64642563 10.67995101 9.96899892 8.74568878 1.93512025 16.55156070 8.22820541 11.42077875 9.94494583 9.93417752 9.44555167 9.01903967 11.13186680 0.5356300 1.1962000 1.1962000 3.0762000 -0.0222710 -0.0336170 0.0090932 0.4106900 0.4347000 0.0306540 0.0306540 0.0113230 -0.0038163 0.0068663 -0.4597700 3.6569000 1.6519000 0.3321200 0.0040973 -0.0145800 0.5223100 -0.0162300 -0.0141670 3.6569000 0.5621700 -0.4760200 -0.0404200 -0.0678000 1.0924000 -0.4583400 -0.4461500 -0.4306700 -0.4428100 -0.0702090 -0.0215860 0.0090932 0.0090932 0.4106900 0.4347000 0.4120200 -0.9322000 -0.4549600 -0.4888500 -0.4621200 -0.4377300 -0.9238000 0.7204500 0.0068663 0.0074228 -0.5064500 -0.4530300 0.0081187 0.0040973 -0.0085151 0.4406100 -0.9217100 0.8296900 0.0061709 -0.4667000 -0.4498600 -0.0144150 0.6537700 -0.0404200 -0.4565700 0.0046419 -0.0280210 0.000 0.000 -0.437 -0.437 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.398 0.710 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 0.000 0.000 -0.437 -0.437 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.398 0.710 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 8.47039247 12.70578103 6.93511671 8.96578428 4.07807180 11.36190606 -0.06491748 0.93508252 8.06611664 7.56447344 NA 7.85533134 0.67210848 10.83623542 9.06868747 0.35015775 7.50243961 9.87322646 12.37918299 11.50275639 9.45649508 7.30725638 10.12946360 0.35015775 8.29559860 9.79723789 2.25704080 NA 11.21259828 4.18304181 11.87310393 11.71715978 6.71647653 10.19916866 7.67658406 9.26229549 3.25704080 2.59807931 0.67210848 1.93512025 8.66417134 10.02787435 10.79335726 2.59807931 8.66639090 6.86585450 9.97996659 6.75954602 10.07892546 -0.64995543 10.88104863 1.93512025 3.25704080 9.22869606 5.78586699 6.60282058 8.34167670 7.96486471 9.03227141 -0.06491748 13.75339973 -0.64995543 11.55396147 NA 7.20190336 3.70770147 8.75529621 9.84950222 14.63236891 6.94634487 8.74461725 17.57079264 9.86979092 11.62845889 12.77287647 11.51223123 10.41658021 11.28973385 13.22345456 8.19877750 9.13887308 9.33029419 -0.06491748 8.63440050 12.15398307 11.37182869 6.46389706 8.19564485 9.57475926 9.07210821 11.24175612 5.55960806 4.59807931 11.16373546 5.73385865 -0.06491748 6.45867893 7.74283690 9.93182604 9.99085150 7.54491113 8.19721178 10.97700438 7.19564485 9.74729441 9.09162156 11.60503562 9.77903822 10.75316668 8.61811162 4.79309994 8.49244047 5.80958680 7.60045338 10.92356512 4.99400941 10.80753549 11.25384825 7.58137611 13.41194772 10.00657953 10.09288515 12.33091901 11.34856877 10.15105460 2.25704080 TCGA-B6-A0IA 51 0 NA 6719 breast stage iia t2 n0 (i-) m0 2-10-2014 female 1992 NA NA other specify yes 0 white not hispanic or latino 56.63.0 5 2 5 NA NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 1.39057e-07 10.5250932 NA 6.8638778 10.6967677 NA 9.9254266 NA 8.4551542 10.3357668 9.3163899 9.7612455 7.3973101 7.5817346 7.6820395 7.5672351 9.0242801 9.1047945 9.7808571 4.1705420 0.9378717 9.4152318 9.2214298 12.4109752 11.4598712 9.4754850 10.0614824 2.6159577 11.1080162 -1.3842071 1.6159341 5.7034136 7.1277024 12.7208765 5.1395104 12.2818412 12.9262079 9.3741733 6.4168499 -1.3842071 3.7858748 7.7808573 10.7129947 8.2812861 13.0141594 0.9378717 13.0287846 14.1211725 4.6820395 10.7514222 10.5889300 7.2009123 8.1686195 -0.3840188 15.5094658 9.7439446 NA 5.3841362 -1.3842071 1.4233092 7.4038531 10.7316441 11.4551540 11.1113056 7.8057748 9.9468671 0.9378717 9.6187652 8.6117172 7.2561955 9.1267143 4.6820395 10.3357668 14.8958509 4.7742072 10.2116739 10.7992754 7.4645735 2.7034108 -0.3840188 7.7374840 8.5860561 9.0630334 NA 4.0422153 7.5672351 10.0942142 11.5553457 2.0753957 5.0753829 4.8447673 10.0886410 11.8363285 3.0082717 14.1584682 7.3874401 7.7166123 12.9937708 11.5829963 12.7074682 9.4801362 10.2861638 11.2963097 10.0723047 9.8429644 1.6159341 7.5846168 12.9924826 10.4762613 1.7858853 10.4731536 8.3146548 -0.3840188 0.6159812 9.2480367 10.4828427 10.1690995 9.3565743 15.5960898 8.8131668 9.4893942 7.2848352 -1.3842071 16.4672905 9.0926964 12.1646517 11.9193029 8.8839073 9.3907373 6.8008261 10.3842751 -0.01215100 1.39690000 1.52720000 0.77314000 0.78257000 0.00169090 -0.00038921 1.58540000 -0.90067000 1.66580000 1.66580000 1.60460000 0.00683110 0.00683110 -0.01057300 -0.01057300 -0.01057300 -0.00329770 -0.01237100 0.00989370 0.00446780 -0.00703110 -0.02175800 -0.02175800 -0.02175800 -0.02463500 -0.02463500 -0.02463500 -0.02006500 -0.01215100 -0.00495790 -0.00703110 0.77928000 -0.00592560 0.03456300 -0.00038921 -0.00038921 -0.92210000 0.14759000 -0.90067000 0.00000000 -0.00419530 -0.89103000 0.00127470 0.00127470 0.00127470 0.00127470 0.00683110 0.00683110 -0.01057300 0.00502360 -0.01237100 -0.01237100 -0.01172200 0.00989370 0.00446780 -0.00703110 -0.88068000 -0.02175800 -0.02175800 0.00822260 -0.02463500 -0.02463500 -0.02006500 0.01031200 -0.00979200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.896 -0.896 0.000 0.000 0.003 1.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.896 -0.896 0.000 0.000 0.003 1.605 0.000 0.000 0.000 5.1858071 11.0689636 2.7858853 7.9888153 -0.3840188 10.2821742 -1.3842071 NA 8.4598713 5.2453055 0.2008810 3.7034108 3.6159459 11.3389711 8.4754850 1.4233092 4.1395104 8.4924673 12.2882650 12.8517401 9.0703421 6.4614402 9.0018127 -0.3840188 8.5137955 9.9468671 4.6820395 NA 10.1222578 2.3163775 13.9085235 12.4092487 4.2598073 9.5896476 6.5584651 9.7720333 1.2009437 2.3163775 NA 7.8756935 9.3849616 11.4938094 11.1688594 NA 8.7636894 8.7335933 10.7208765 6.8874132 9.1492799 NA 12.3130263 -0.3840188 3.0753786 10.4525529 7.3153489 NA 9.2552909 5.3301962 4.3163920 8.1686195 14.6754848 NA 9.9641251 -1.3842071 7.3574174 3.0082717 8.6173584 8.9524568 13.9191505 5.4863154 9.3146548 12.2818412 9.8943996 12.1491582 13.0141594 11.8387451 8.6833845 9.8026834 13.8697977 9.9390050 8.5860561 9.8501689 0.6159812 6.9778935 11.3183393 9.9844566 5.7244757 10.1067910 9.0285200 8.1705390 9.2991553 5.7139817 7.3540422 11.4598712 5.8254040 -0.3840188 9.1512256 5.4457995 7.2269747 9.8780451 8.4801362 10.0285200 11.9695106 1.2009437 11.4551540 9.9828188 9.8897458 8.5496407 10.1057981 7.8850771 NA 8.1753275 3.9378811 -1.3842071 11.5553457 5.4361285 10.0306354 10.0886410 7.1863748 14.8073565 11.1294311 11.2868277 12.2641954 9.7420092 9.1781925 -1.3842071 TCGA-B6-A0IB 64 1 3941 NA breast stage iv t3 n3 m1 2-10-2014 female 1992 NA NA infiltrating ductal carcinoma yes 8 white not hispanic or latino 56.63.0 5 1 3 NA 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24885e-06 2.081417e-07 11.7551757 5.4685605 8.2113048 11.5239205 NA 9.3528075 0.9554616 8.7036821 11.5682042 11.0103197 9.7740715 8.5442041 10.0233718 9.0420678 8.7553106 9.1994567 10.0305227 9.5329181 4.9704396 0.9554616 9.4203754 9.3831513 13.1475766 10.7714063 8.4738145 10.5951315 3.2774195 10.2698837 -0.6295009 1.1778540 5.1649431 8.2331643 11.0425101 4.8134683 12.0373056 12.8014367 9.1608753 8.2269526 5.1649431 7.7606960 7.5848460 10.8255971 7.6349693 12.8636943 3.7628484 10.7788565 13.8412174 6.9741530 10.1086486 11.3861161 8.8543426 8.6708793 1.1778540 14.1257109 7.0708970 -1.6295009 7.8523260 -0.6295009 2.9554802 9.3326999 10.2195409 9.2455083 9.4770898 9.2676159 10.1399515 4.4790494 10.8683786 9.9418054 6.3478074 8.2983046 1.6924718 10.1649426 14.5472454 8.8157797 10.9613477 10.5395123 9.8467667 0.9554616 0.9554616 8.8683787 8.0394121 10.0674943 -1.6295009 5.0287371 7.8763383 9.5969391 9.1762707 6.5799796 1.3704991 5.4579882 8.7692706 11.8656323 5.5799796 13.1542924 7.7585444 7.1353984 11.3756250 13.0409064 12.1714267 9.9038565 11.2158208 11.0920533 10.7340045 10.7120456 4.3012657 8.6924547 11.8626303 11.5611231 -1.6295009 10.7181481 9.0125785 2.6184501 2.9638810 10.0066983 10.9289475 10.0552754 9.2960813 15.1069287 9.6657218 9.5010973 8.1843081 -0.6295009 16.3057322 9.0631424 13.9301130 11.2634490 10.3341454 10.0340849 7.3188943 11.3053160 0.7060700 1.1396000 1.1396000 -0.4711700 0.0265140 -0.4464200 -0.4575800 0.0083344 0.0093098 0.4616100 0.4616100 0.4616100 0.4624600 -0.4508300 0.2834300 0.2834300 0.2834300 -0.0062009 0.0088920 0.5749600 0.7435500 -0.4424300 -0.2896400 -0.2896400 -0.2896400 -0.1663700 -0.1663700 -0.1663700 0.4057700 -0.4459000 -0.4421000 0.0109820 -0.4536100 -0.4464200 -0.4464200 -0.4575800 -0.4504000 -0.0178030 0.0093098 0.0093098 0.4089400 0.0136320 0.4616100 -0.1420700 -0.1420700 -0.1420700 -0.1420700 -0.4508300 0.2869100 0.2834300 -0.6299800 -0.0062009 0.0088920 0.0088920 -0.9478800 0.3533200 -0.4424300 -0.4546100 -0.2896400 -0.2896400 0.1843400 -0.1663700 -0.1663700 0.4057700 -0.4060600 -0.0040162 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 7.8279079 11.8652574 2.6184501 9.9722976 2.6938995 11.8643823 -0.0445384 NA 10.0946143 8.2653445 NA 6.8980039 2.2774195 10.4754531 8.9096855 3.7280838 5.7280783 9.4101314 11.2234464 10.7081487 8.7816987 7.1018454 10.2634490 -0.0445384 8.6279147 10.1399515 2.2774195 -0.6295009 10.6611217 0.9554616 11.9362239 11.7256025 6.8503069 9.6308583 7.8360933 9.5360620 6.3817540 -1.6295009 1.3704991 6.7883790 8.9971484 10.2664806 10.0627063 3.4149203 9.1129709 7.3901174 9.9526687 6.3071644 9.4797045 NA 11.4998098 -1.6295009 3.9251164 11.4051573 6.6047222 -1.6295009 9.2128772 6.7280783 7.6160798 1.1778540 13.6372036 0.9554616 10.7379416 NA 4.1778779 7.4842687 8.4998100 9.1746578 13.847778 6.342071 7.915491 12.037306 10.088203 11.339014 12.863694 10.984316 8.204998 10.436280 13.238240 9.143666 8.039412 9.572651 2.070973 7.155161 11.276666 10.796267 7.280420 8.251641 9.505595 8.498263 10.514423 3.618450 6.184308 10.771406 6.125413 6.535434 10.850812 7.175625 8.091626 9.562820 8.133474 9.344224 9.388031 3.228511 9.245508 11.089702 11.690199 9.706475 10.647524 7.187510 9.576931 8.607844 7.373342 3.277419 9.176271 5.370527 9.763381 8.769271 7.181099 13.474634 9.696956 9.242432 12.355657 10.598143 9.222276 1.177854 TCGA-B6-A0IC 90 1 1542 NA breast stage x t2 nx mx 2-10-2014 female 1992 NA NA other specify yes NA white not hispanic or latino 56.63.0 5 5 2 NA NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.946798e-07 10.9441365 -2.0576919 7.8936613 12.2943509 NA 10.7551554 1.8492787 10.0606686 12.0853610 11.2880589 10.0971945 7.2552590 9.5362344 7.9239437 8.0404086 8.5385661 11.0679514 8.8019114 4.3517697 -1.0576919 11.5149582 10.3054161 13.1622256 11.4663059 9.6557629 10.4041116 2.1902988 10.8265355 -2.0576919 -0.4727294 5.1903027 12.0315786 12.6852648 2.0298416 12.9051369 12.9064916 9.5547841 6.9730441 4.0084690 6.3217550 8.1457243 11.0852812 5.3853206 13.6874730 3.6972623 9.4282058 14.4183315 9.0351337 9.7886033 10.9718362 2.1902988 7.1469474 -0.4727294 13.6699167 9.6998247 0.5273707 8.0456641 NA 1.8492787 10.2991035 10.1702931 11.6616583 11.8476694 10.3668052 10.1711952 NA 10.9768315 10.1756965 7.0509011 8.2079914 3.5570914 11.1812290 14.6085727 9.2156417 12.4498614 11.6739076 8.6736956 0.9423831 7.2068190 8.3749182 8.8560140 12.3920410 -0.4727294 3.5570914 7.4181098 9.6367343 11.6227360 5.1903027 3.5862363 4.1122998 10.1997642 12.1425854 3.3346970 13.1929339 7.4600455 7.4181098 11.3371071 10.9550010 13.1700300 8.5055726 10.4931232 10.7513406 10.7289851 11.4090902 5.6148011 8.7720991 11.4855291 11.5726436 NA 10.5471613 8.9737329 0.5273707 3.9448584 10.3528278 11.0471390 10.1426621 8.9225160 14.4596921 10.8104273 9.5413594 9.9508050 -0.4727294 16.3587864 5.9647452 12.7286971 11.7584601 10.4822622 9.6103751 8.5320274 10.7522772 -0.00110870 -0.00110870 -0.00110870 -0.00268590 -0.00235530 0.00235810 0.00097064 -0.00020264 -0.00020264 0.00176190 0.00176190 0.00176190 -0.00443120 0.00444110 0.00069327 0.00069327 0.00069327 -0.00166290 -0.00166290 0.00458000 0.00208050 0.00166420 -0.00318590 -0.00318590 -0.00318590 -0.01257600 -0.01257600 -0.01257600 -0.00290910 -0.00110870 -0.00110870 -0.00318590 -0.00268590 0.00235810 0.00235810 0.00097064 0.00097064 -0.00020264 -0.00020264 0.00374330 0.89487000 -0.95551000 0.00652620 0.00583090 0.00583090 0.00501240 -0.00296170 0.00444110 0.00444110 0.00069327 0.00069327 -0.00166290 -0.00254560 -0.00254560 0.00264820 0.00208050 0.00166420 -0.95043000 -0.00318590 -0.00318590 0.01516800 -0.02680400 -0.01257600 -0.00290910 0.00000000 -0.00622860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.845 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.845 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 5.81889401 10.92198029 5.71056126 9.26374079 4.58623031 10.72578401 0.94238313 NA 7.54042875 7.18316789 NA 4.49696719 2.33468268 10.44744365 9.42367145 2.58623632 3.64281708 8.88269012 12.31408504 10.43172271 9.48270794 8.17479738 9.71262742 2.46594835 9.65016696 10.17119519 -0.05769194 NA 10.93017338 2.80035118 12.31707635 11.72752234 5.00846448 10.24244293 6.56076233 9.45412900 6.08703421 0.52737066 0.52737066 4.89657218 9.40180814 9.86458918 10.03744372 -1.05769194 8.21474944 6.88782012 10.54808747 4.81273951 9.94096688 NA 13.13943952 0.74974878 7.11730232 8.53094118 6.50915425 -2.05769194 8.57900096 5.34325502 5.55708532 2.46594835 13.67305885 -2.05769194 10.07069308 -0.47272944 8.07936744 2.84925871 7.37908807 9.41150951 14.321877 5.142050 8.829597 12.905137 10.415575 10.342188 13.687473 13.375212 9.215006 10.785905 12.486918 9.203884 8.856014 8.143275 1.401794 7.646280 11.141589 11.07182044 9.14878034 8.82730999 9.49216104 8.65662186 10.39686601 5.32608068 6.92251543 11.46630588 5.09212285 NA 7.16396359 6.45499836 7.23469770 9.85750893 9.60415456 8.76175732 13.37537498 -0.05769194 11.66165831 10.26430454 12.30760529 8.62975221 10.63608115 9.34751795 NA 9.65948738 7.12903568 -0.05769194 11.62273598 1.64279398 10.81428164 10.19976423 7.45811538 13.86853250 10.50700233 10.65059818 12.60226086 9.85788243 9.99969128 -0.47272944 TCGA-B6-A0IE 38 1 1999 NA breast stage tis tx n1b m0 2-10-2014 female 1995 NA NA mixed histology (please specify) yes 6 black or african american not hispanic or latino 56.63.0 2 2 4 NA NA NA 3 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6.118507e-07 1.112456e-07 12.9135146 6.9123816 6.9908085 11.5551090 -1.5713216 9.7070153 NA 7.9793126 10.5887525 7.6621856 9.6078529 7.4838480 7.8443078 9.9898538 7.2487445 9.6003683 10.0437357 10.4004687 6.6331376 1.0134980 10.8052339 10.1159415 15.0504031 10.8590184 10.1475268 10.6205504 5.1009903 9.5383965 0.7505208 1.7504779 5.9521285 11.2168764 12.5874911 6.5934733 11.9984215 12.9387737 9.9628688 7.6906608 3.8879931 7.2066432 8.4919609 9.7448475 7.3914619 12.7875604 1.0134980 10.3914619 13.1326316 4.3827641 9.6495125 11.6361903 5.5160278 6.6573842 2.6764931 13.2257978 6.7093361 -0.5715360 8.9472190 -1.5713216 5.9831555 7.6812314 9.1176904 7.0247552 9.5617082 9.2391376 9.6847746 2.4285712 10.1767587 9.7023615 5.0724231 7.3173095 4.6573828 11.9513926 14.5216533 5.8395691 9.7855680 10.0697145 6.9599475 1.0134980 3.6764931 6.6428849 8.7312050 10.5798996 NA 5.0867753 6.9715976 9.6759001 11.3245198 6.6717392 3.5578512 3.4729556 9.2431483 12.1047434 1.5985081 12.6573094 5.1428096 6.7861180 11.5437721 12.0432757 12.4538785 6.5265978 10.2250111 10.8173904 9.8859468 10.4547434 2.5160404 9.1759198 11.7421575 11.8126751 0.7505208 10.5607443 8.5846491 0.4285712 3.7002177 9.3035472 9.3710803 9.6115809 10.3914619 15.5183060 11.1198732 10.6971079 8.8849202 2.5160404 16.1670936 8.3900154 13.0501027 11.2948789 9.3965125 10.0354337 7.5397017 10.2367740 0.0218000 0.5228700 0.5440100 -0.0309500 0.0278450 0.0487520 -0.0645740 -0.0110600 0.0327040 -0.0239460 -0.0239460 1.5406000 0.5114200 0.5316300 -0.5903900 0.5051600 0.5051600 0.0037465 0.0037465 -0.6028700 0.0102850 -0.0583510 -0.6063200 -0.0744920 0.9894900 -0.0740100 -0.0740100 -0.0740100 2.6354000 -0.0540160 0.0218000 -0.0049844 -0.5898000 -0.0102150 -0.0192520 -0.5712000 -0.5712000 -0.0110600 0.0327040 0.0287630 0.0000000 -0.0052610 -0.0486970 -0.0081624 -0.0081624 -0.0089906 -0.0369240 0.5211800 0.4554700 -0.6070900 0.5229400 0.0037465 0.0114000 -0.0560050 -0.5387500 -0.0198630 -0.0418430 0.4616100 -1.2333000 -0.5873500 -0.0019399 -0.0740100 -0.0740100 0.9511700 -0.5718000 -0.0934030 0.511 0.511 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.906 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.380 0.511 0.511 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.906 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.380 8.35040663 12.43383953 7.40010922 9.80740258 2.63254742 11.44066661 0.01349799 -0.57153597 8.99842147 9.46336477 0.42857122 6.57046900 2.33545467 10.88389310 9.30738321 2.42857122 7.25193302 9.65978705 8.06881105 9.67233499 9.96224607 7.26461618 9.95212779 0.42857122 10.07916888 9.68477456 5.38276062 -0.57153597 10.71136472 3.82088354 14.02551267 13.28916793 7.37401006 9.66995332 7.68595346 10.11331450 3.63801590 0.75052076 NA NA 9.06337701 11.60800850 10.13721877 4.55785118 8.01707452 7.59347255 9.97738784 5.94426579 10.11987320 -0.57153597 10.50504744 0.01349799 4.15648561 10.33946713 5.80560201 7.58843731 8.10628550 7.09034429 10.41796040 -1.57132159 14.39844701 1.42857122 11.52495160 NA 10.58021673 6.64288493 8.36814498 9.06156102 13.370834 5.516028 8.879777 11.998422 10.135494 10.603804 12.787560 11.457853 9.073116 9.958972 12.191986 10.411916 8.731205 8.839017 2.013534 8.200056 11.600368 11.014467 6.417250 8.778367 9.008824 6.745978 10.367451 5.516028 9.786668 10.859018 6.467485 4.183455 4.638022 8.101133 10.799798 10.388930 7.009766 9.141093 6.183453 8.292752 7.024755 10.757241 10.179273 8.321867 10.606608 7.944266 1.013498 9.470328 6.013529 8.680048 11.324520 5.439793 11.043490 9.243148 7.954380 14.685420 10.518016 11.146456 11.854700 11.632373 9.761721 1.235911 TCGA-B6-A0IG 50 1 4456 NA breast stage iib t2 n1b m0 2-10-2014 female 1994 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 56.63.0 6 3 1 NA 2 2 1 2 3 1 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.39057e-07 11.5847766 3.9702095 7.2373649 11.6951930 1.4676968 9.8685902 -0.1173178 8.7313713 11.2129182 8.3692479 9.9470419 8.0742185 7.5385770 10.6528615 8.4063100 9.0742188 9.6841872 9.8652665 6.2977857 0.2978370 9.7991254 10.2147848 13.6895664 9.9899654 8.5169544 11.0634862 5.2166489 9.2461530 NA 0.2978370 6.8562064 11.2175802 11.8992083 5.4063088 16.7591053 12.0939268 9.9411910 6.9912724 2.8213429 5.8055814 8.7653912 8.2736338 6.9666704 12.9333905 3.2046729 9.9759457 14.2658225 3.0526767 9.3832582 10.8813387 7.8466074 7.1306756 3.2977930 14.7020951 10.1191611 1.7572366 6.9488379 -0.7022803 4.3638719 9.5698323 9.7536266 9.3332721 9.3852485 9.5651577 9.6202772 4.0526767 10.9580045 10.5834770 4.4475329 7.3746013 2.5457213 10.4167268 14.2960236 9.9088474 10.3114574 10.8359747 7.7551667 1.4676968 2.8213429 5.6465141 8.1834820 9.9519743 NA 5.1051417 7.3256913 9.5610550 10.9768259 7.4626928 4.1051417 3.3852516 10.3373903 12.0876250 8.0709249 12.8606840 4.3638719 7.0889483 11.3535765 13.1378752 12.5319296 7.1926035 10.9348634 10.9461434 10.3090794 10.2395670 3.9702095 8.4714631 10.8974662 11.8558477 -1.7022803 10.1956312 8.9225811 0.8827604 3.9145550 8.8789864 10.5756543 9.7613100 8.6825694 15.2619461 9.5901074 9.5133188 7.3719273 0.2978370 14.9365328 11.5108900 12.7079058 11.9729710 10.3132008 9.4430811 8.1035296 10.3427331 -0.69577000 0.02384700 0.00734440 -0.70775000 -0.70236000 0.04457400 -0.73345000 0.02006300 0.02300500 0.00208050 0.00208050 0.71321000 -0.00553750 0.01768400 3.65690000 1.27340000 -0.71239000 -0.00622860 -0.70550000 0.00972760 0.02960600 0.00569190 -0.73372000 3.65690000 1.21430000 -0.05064100 -0.05064100 -0.05064100 0.00235810 -0.71649000 -0.69577000 -0.01202400 -0.70756000 -0.71533000 0.01112100 -0.70621000 -0.70109000 0.00241650 0.02904400 0.02188400 0.00027728 0.00083195 -0.71203000 0.03129500 0.02132300 0.00000000 0.00000000 0.01419000 0.01419000 0.01349200 -0.71933000 -0.70729000 -0.60119000 -0.04156700 0.01838300 0.01015000 -0.01143700 -0.01064600 -0.73372000 1.44500000 -0.04480900 -0.05064100 -0.05064100 -0.00138570 0.01796300 -0.73881000 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 8.2977857 13.2875794 6.4373376 9.6476198 2.4088205 11.8939755 2.3852377 0.2978370 9.1290929 7.7469341 -1.7022803 7.4294369 1.8827604 10.8716696 9.3523900 3.5072365 7.2432292 9.2218558 11.5578232 10.8413009 8.8926700 6.7198501 10.6884921 0.6197417 8.4449908 9.6202772 3.1051417 0.6197417 12.0379881 1.9982316 12.1025218 12.3614336 7.1865293 9.7592652 10.2151578 9.7344973 5.5831881 2.2977784 NA -1.7022803 8.8184045 11.2104880 10.0970674 4.1557654 10.1759977 8.4739590 9.4545008 6.9877836 8.5072393 -1.7022803 10.9535400 2.2046729 3.6197182 9.9225309 6.1588722 5.0922032 9.4264245 6.1804284 12.1862436 1.8827604 13.2265817 -0.1173178 11.2642912 1.7572366 5.4576567 4.2285263 8.2991938 9.6706508 13.420080 6.912495 9.152654 16.759105 10.463321 10.845162 12.933391 11.669835 8.423199 10.508153 12.677841 9.598710 8.183482 9.096258 1.882760 7.867641 10.947716 11.4133171 5.1926045 8.4360577 9.2621266 10.7882105 10.5451259 5.3201525 8.8986280 9.9899654 4.3852516 0.2978370 7.3799345 9.1050602 9.7230016 10.5938416 8.2991938 10.3438866 8.7541402 5.6287036 9.3332721 11.0386205 10.6423591 9.7018628 10.8142245 8.3006006 2.2977784 8.9961085 6.7787776 6.8095379 10.9768259 7.4601774 10.6004247 10.3373903 7.2606815 13.4071675 9.9425434 9.6673830 12.9524777 11.7185355 9.7277154 0.8827604 TCGA-B6-A0IH 81 1 3418 NA breast stage iiia t3 n1b m0 2-10-2014 female 1995 NA NA infiltrating lobular carcinoma yes 25 white not hispanic or latino 85.58.0 8 2 3 NA NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 5.562279e-08 11.07663638 9.19295581 6.60554174 11.38823927 3.16075888 10.79657585 2.16075888 10.13803688 11.87079808 8.24586070 9.57579448 8.41919208 9.31276000 9.56637128 7.97382535 8.98518532 10.22145300 9.62109911 7.83003597 4.51439373 10.27681208 10.04340001 13.33012531 11.30513201 9.42232952 10.50997675 6.86119611 10.74863867 1.99084597 2.45027429 9.36260862 12.54482122 12.29561111 7.64188340 12.76128943 13.65905221 10.09215113 7.91860985 4.79818534 7.50258441 9.04068069 10.72342340 7.81738023 12.82322760 1.31278133 11.18281655 13.90395516 7.66325708 9.37822462 10.66767059 7.47464776 2.89772447 NA 14.50212850 9.64366809 4.12011136 8.46047392 NA 5.70507663 10.35770055 10.05152790 9.46149091 11.15730897 9.62109911 10.43584681 2.79819571 11.58515663 10.17446734 6.71193123 8.63649049 7.37884972 10.54254023 14.29314964 7.14377604 11.14628272 10.98518546 9.03659180 2.69126615 5.05692162 9.22445178 9.24113039 11.65527928 NA 3.31276681 6.97951666 10.27738982 11.22175307 5.66325637 5.23876011 5.07829387 10.36042936 11.82668504 -0.00911773 13.12806334 4.51439373 7.72892455 12.10392298 12.43739843 12.76500134 8.98235391 10.17136285 11.29147055 10.92157677 11.12910383 5.05692162 7.88565001 11.70206877 12.15369534 7.38743665 10.33235080 9.25761861 0.57579638 4.54787547 10.13485290 10.64457276 10.06831531 8.96667992 15.09362791 9.98235391 9.83318232 8.46859024 4.34838116 14.39959296 8.58515673 12.76025665 13.43920648 10.31782320 10.22804195 9.03931883 11.07114322 -0.2036100 0.9645200 0.9624700 -0.2007400 0.0095883 -0.2029700 -0.0072629 0.0000000 0.0000000 0.2891300 0.2891300 0.3782500 0.3323800 -0.0575200 0.1204800 0.1306600 -0.0653130 -0.1515700 -0.1515700 -0.0678600 -0.2012400 -0.4286800 -0.2550300 -0.2550300 -0.2550300 0.2347300 0.2347300 0.2342600 0.3659200 -0.2036100 -0.2036100 0.1895000 -0.2007400 -0.2013700 -0.2029700 -0.0072629 -0.0072629 0.0000000 0.0000000 0.0000000 0.2197500 0.2197500 0.2891300 0.1901000 0.1901000 0.1901000 0.1901000 -0.0575200 -0.0651460 0.1204800 -0.0653130 -0.1515700 -0.1515700 -0.1515700 -0.0678600 -0.2062700 -0.4098100 -0.4361500 -0.2550300 -0.2550300 0.2051900 0.2347300 0.2342600 0.3751200 0.1758800 0.2454400 0.332 0.332 0.120 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 0.332 0.332 0.120 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 9.60554193 13.45026363 7.81419919 10.29689373 4.43045255 10.52707923 1.99084597 -0.00911773 8.67558061 10.96954244 -0.00911773 8.90521700 4.03522799 9.95517285 9.63829037 -1.00926292 10.44615923 9.91638647 11.10359730 9.29689373 9.32889973 7.52999112 11.39756849 2.31275229 9.30030840 10.43584681 4.84881320 NA 10.41604791 4.57579638 12.98942244 12.12075893 9.34508141 10.67382660 8.26928146 9.03659180 4.20028462 0.99080968 1.57579638 4.41709638 8.48868370 8.99645654 9.80781567 6.15070386 8.04171445 6.36587097 9.72045274 6.64904344 9.63829037 1.57579638 12.00048570 3.69126615 5.69127173 9.89030228 6.45607180 7.75570346 9.62836260 8.07031687 9.31838464 -1.00926292 13.94238994 1.31278133 10.09674058 NA 9.02287766 7.42962350 7.79173204 8.62382737 11.818840 4.968114 8.207578 12.761289 10.207578 10.716198 12.823228 11.171984 8.987433 11.099356 13.188049 10.235196 9.241130 10.539654 -1.009263 6.677332 12.842776 11.5997798 7.0622944 8.7606697 9.1507033 7.3911138 11.0490403 7.1252585 7.7356657 11.3051320 6.8173802 2.9908278 8.6073810 5.9605349 12.4419143 11.0197740 7.9880115 8.1905042 12.4603466 8.1657577 9.4614909 10.3980998 11.5628216 10.7945596 10.8209510 9.1239742 0.5757964 9.0777776 7.8668579 8.4379152 11.2217531 7.6773328 10.8038115 10.3604294 7.0782949 13.9906999 9.5578374 10.3245465 12.7904172 11.1143068 10.0649735 3.2387563 TCGA-B6-A0IJ 42 0 NA 5383 breast stage iib t3 n0 (i-) m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.469029e-06 6.591155e-07 12.7149506 1.6244285 6.0598030 11.4838107 NA 8.9123394 NA 8.7961626 11.4026436 10.5749067 9.4223733 6.9787665 8.9675018 10.4117261 7.7648981 8.9771628 9.2891068 10.6445132 8.6182563 3.7195777 10.5045571 13.8566745 12.0431322 9.9819691 9.5307612 10.2277062 7.5786135 10.0997821 2.8088381 0.1650436 9.1300482 10.0077287 11.9698203 6.9098199 11.1545574 10.4173553 10.6071514 5.5743771 3.0718828 7.4341119 7.9479834 9.2195899 9.2039044 6.1365298 -1.8349564 12.2468017 9.1586317 9.0057635 9.8155886 10.8508293 7.3913974 6.8374110 1.1649793 15.1433018 10.7445371 -1.8349564 9.8178304 NA 6.5743771 9.5263811 10.1904712 8.9240414 9.8636901 8.6826548 10.5941307 1.3349115 9.8440256 10.9337901 5.0353512 7.8427048 3.8374084 7.7760105 15.6632605 7.7653630 10.4466257 10.0793706 11.0181001 1.7499633 -1.8349564 7.2418011 8.9962927 10.8738538 -1.8349564 2.9198740 8.1016233 11.6503117 10.5159247 4.9331713 7.5048357 7.0838484 10.1133527 12.0789968 NA 13.3697094 3.9978795 6.5486894 10.6897720 12.3661905 12.8100246 7.1104290 10.2819792 10.8794456 10.6620015 11.0946137 4.7796957 8.5807274 11.7849761 8.9389488 0.7499204 10.7988889 8.9496204 2.5573121 2.8117176 9.2059601 11.9872575 10.0711244 9.7272279 14.7422815 10.9079264 9.0361206 6.1479782 0.1650436 13.0622637 5.2310752 12.5090733 11.8870459 9.8484187 9.0252966 7.5378505 10.5511255 0.9322300 1.0407000 0.1980100 -0.2895200 0.4425700 0.0680910 0.8550200 0.1885900 -0.2790600 0.3424200 0.3424200 1.3571000 1.0767000 -0.2843000 0.0000000 0.0000000 -0.0354480 0.5266600 1.6974000 0.1123600 -0.2709300 0.1942100 -0.2742800 -0.2742800 -0.2742800 0.1969500 0.1969500 0.1969500 0.6016000 -0.0863860 0.3330200 -0.0253460 -0.2883400 -0.3175100 -0.2907100 -0.2924800 0.4473200 0.1885900 -0.2803700 -0.3074500 -0.2877400 -0.3267000 -0.5924400 0.3228600 -0.9126600 0.8388400 0.0856540 -0.2843000 0.6366400 -0.2960300 -0.3007500 -0.1750000 -0.2801300 -0.0048461 -0.0264410 -0.2758300 -0.2894900 0.6073800 -0.2742800 -0.2742800 -0.0042929 -0.2686500 0.1969500 -0.2151500 -0.0471240 -0.0034763 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 9.1727135 12.5970053 1.3349115 7.8267633 5.2942678 11.6620888 2.8654240 3.6244168 9.3058153 7.5701267 0.1650436 7.6285097 7.5594482 11.6379301 10.1518941 4.6407192 8.0506818 9.1915089 6.9298573 9.4509656 8.5171174 6.5870499 10.6333549 3.6885497 8.6528256 10.5941307 1.4869203 NA 10.8260955 3.0718828 12.7551046 11.8225272 6.2256817 10.0085141 8.9537038 9.9775639 4.1191818 3.6885497 NA -1.8349564 8.7508868 9.7229277 7.1133525 0.1650436 8.6075352 6.6963667 9.9863609 2.6885385 9.3780898 3.7195777 12.7539928 3.0229714 4.0229625 10.1617591 7.6717293 8.3535743 9.4550043 9.4659100 11.1844025 2.3349115 13.5420265 -0.8349564 10.8835183 NA 9.4223733 2.6244285 7.9707294 8.8285437 12.821392 9.553003 8.712844 11.154557 10.298449 11.476166 6.136530 8.408159 8.604608 10.719574 13.736620 12.700990 8.996293 7.301976 4.252446 7.107500 11.248132 11.3199618 5.5912515 9.3045368 9.5669316 5.9787677 10.8362457 7.8016101 6.0897990 9.9819691 4.4129102 -0.8349564 9.6310619 10.7229971 8.1133525 11.7808450 8.1465529 9.2852233 8.9994566 8.4469154 8.9240414 10.4826807 10.9925266 11.7367381 11.2122798 8.4457561 NA 9.4609897 6.1593386 9.9148549 10.5159247 4.3744414 11.5540790 10.1133527 8.0981005 14.9525055 11.0899835 10.7515908 12.8169901 10.8151397 9.2524483 4.4687658 TCGA-B6-A0IK 63 1 571 NA breast stage iiib t4 n1 m0 2-10-2014 female 1994 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 61.60.0 6 3 4 3 3 2 2 6 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.475214e-06 8.065304e-07 12.0056732 4.9096675 6.4380466 11.0761205 -0.7908586 9.1807715 NA 9.4464380 11.5532464 7.1750125 9.7010810 7.2536225 9.2204552 10.6297146 4.9371466 9.7110652 10.6809032 10.7199921 6.6930436 3.0165855 9.9914072 11.1462339 14.6019479 9.7367050 8.9303272 10.9122663 5.7483861 10.6417699 0.7941871 NA 7.6930436 11.5345334 12.5799154 8.0578510 12.9470034 12.8645351 9.5311561 4.7010832 1.5311693 5.5490777 9.1605126 7.2590766 6.1979126 12.7782528 0.7941871 9.8860666 12.1117915 5.9905873 8.8530840 11.3223189 6.2536225 9.3941034 2.9096771 14.4367924 9.2873788 3.0165855 8.0703147 1.7941871 4.6015480 10.1458659 10.4416488 9.1950700 10.0964486 10.0085096 9.7847672 2.9096771 11.0381578 10.2806903 5.8674394 6.0165832 10.5618232 9.7503246 15.4305130 6.6817163 10.4452422 10.0656535 8.1575950 -0.7908586 4.2966923 6.6768330 8.8781129 11.3903802 NA 2.9096771 6.8312794 9.2495176 10.8616248 10.1273458 5.0421190 4.2536187 10.7254205 12.1802326 1.7941871 13.4791582 4.7941923 7.1634243 11.5474072 14.2441129 13.0156769 6.5579568 11.1284637 10.4713228 9.7229555 11.1954255 4.3791496 8.9674511 12.2991749 10.0672090 NA 10.1964920 9.0842094 0.7941871 2.2092350 10.0765067 11.5297465 10.0757342 9.1692298 15.2507802 9.6542427 9.6448982 8.1221172 2.5311444 15.2036035 9.4677940 11.9135639 11.5024122 10.0531490 9.1575953 7.3072600 9.9144283 -0.00678130 -0.00678130 -0.00207840 0.00416320 0.52660000 -0.51943000 0.04273200 0.01056400 0.01056400 0.00083195 0.00083195 3.65690000 -0.52839000 -0.52669000 -0.52010000 -0.51948000 -0.51948000 -0.12317000 0.00736090 0.02188400 0.00583090 0.01474900 -0.54492000 -0.55547000 3.65690000 -0.04373700 -0.04373700 -0.05576900 0.00917050 -0.00221680 -0.00678130 0.00000000 -0.55357000 0.02300500 0.01922300 0.01237600 0.01237600 0.01056400 0.01056400 0.00333180 -0.02058400 0.01461500 -0.51764000 -0.51537000 -0.51537000 0.48372000 0.48372000 -0.52669000 -0.53154000 -0.52010000 -0.51948000 -0.12317000 0.00736090 0.00736090 0.01159800 0.00583090 0.01112100 -0.00130390 -0.54492000 -0.05172100 -0.51362000 -0.04373700 -0.07319300 -0.55897000 -0.21775000 -0.00636680 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 8.5038488 12.5439202 4.9641167 8.4089003 3.2101239 11.7481444 2.5311444 2.0165676 8.5379029 7.1692295 -0.7908586 7.7344746 3.9641121 11.8342518 8.9320355 1.7941871 7.5446183 9.0389508 10.5407048 9.6839480 10.9668888 7.3436539 10.4847705 2.3791496 7.4618936 9.7847672 3.1161152 NA 10.3372223 2.9096771 12.5544946 13.3803266 7.7327902 10.0302046 7.6849611 9.9963143 4.0165855 2.5311444 NA 4.7327902 8.6036905 9.4689712 11.6717302 5.0421190 11.2617553 7.2481467 9.6849614 5.4380466 8.5799155 1.7941871 9.9498519 3.4571609 1.7941871 9.7729771 6.6580458 5.6354932 9.3589751 7.6645554 10.5095806 4.6686581 13.8190993 1.2092038 10.9975385 NA 8.1251076 4.7327902 8.6312928 8.4064448 12.214677 7.067208 8.299340 12.947003 10.589689 10.454186 12.778253 10.675814 8.670708 10.392863 13.252084 10.290045 8.878113 10.839040 NA 10.546850 10.620209 11.4657315 5.0918691 9.2134484 8.2993404 9.0872788 11.2315403 5.6521710 7.5130090 9.7367050 8.0734143 1.7941871 8.2645106 7.4387677 12.2120430 10.7866568 7.7866565 9.6004716 10.0880452 6.7483874 9.1950700 10.5815489 10.9893576 9.7714703 11.1355240 9.0872788 0.7941871 9.2462256 6.8385850 6.9971309 10.8616248 6.2204557 11.7894865 10.7254205 7.3589746 14.2649341 11.0834409 10.7628573 11.8144760 11.0768928 9.7050830 2.7941871 TCGA-B6-A0IM 75 0 NA 3836 breast stage iib t3 n0 (i-) m0 2-10-2014 female 1997 NA NA other specify yes 0 black or african american not hispanic or latino 56.63.0 3 1 2 NA NA NA 1 1 3 3 NA NA 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 10.97510910 6.54512202 7.49280576 11.12149525 0.08976931 11.48973950 -0.91023069 9.89714904 12.27737810 8.09401433 10.23763494 7.56957464 11.20986991 9.96937731 7.52024622 8.37981284 10.24049334 9.66107261 6.89392520 0.41175163 10.39642540 8.85632312 13.05616433 11.86807656 8.59262596 10.37027492 4.39357408 10.24239577 -0.32517782 -1.90995958 8.40607572 11.04180725 13.06097833 7.70450405 13.30008489 13.22217329 9.37866009 6.30896330 4.48211255 5.81089291 9.02274703 7.34953690 8.75779267 13.06003478 6.13964344 10.97815680 14.20863377 3.25972444 8.32819874 11.35247622 9.26659050 7.32341331 -0.91023069 13.52331723 7.02643159 0.89716296 9.24271253 -0.91023069 3.73364719 10.77738848 10.17227573 9.81473418 10.92998187 10.50315749 9.70817947 0.08976931 12.29635060 10.23827062 6.58964066 7.89231027 2.94777835 11.16527321 14.91967780 8.75394811 11.06349142 12.48485954 9.66958135 -0.32517782 NA 7.64246332 9.30472025 10.92169502 -0.32517782 6.67099467 7.87279245 10.58814466 11.11424116 5.37519586 4.42964274 5.81771534 10.12562411 12.21229854 4.93528529 13.49273948 6.37519586 9.22293639 12.39834642 11.77541888 12.98352219 8.13145316 10.54280737 11.50381858 11.33965858 11.57713167 6.26472032 8.87033389 11.51343523 13.38588576 NA 11.05774079 9.38269081 0.89716296 2.30468626 10.28578134 10.42434667 10.52181388 9.09120237 15.23348617 10.36940465 10.49971526 8.52129185 1.67477700 15.77135505 5.31861330 11.60327495 9.73184577 10.94076219 9.57260209 8.52650550 10.29847343 0.00555290 0.00555290 -0.02041200 -0.00498440 -0.02054900 -0.02794500 -0.01794100 -0.01409000 -0.01409000 2.94000000 2.93310000 0.81866000 0.00194180 0.00194180 -0.01502800 0.05209900 -0.84579000 0.00805670 -0.00339830 -0.01354000 -0.00802440 1.59150000 0.03510000 0.03552400 0.03552400 0.04117500 0.04117500 0.04939800 0.01796300 0.00555290 0.00555290 0.00138680 -0.02054900 -0.01470600 -0.02794500 -0.01794100 -0.01794100 -0.01409000 -0.01409000 -0.01862800 0.00013863 0.80772000 -0.85829000 -0.01100000 0.00249690 0.00249690 0.00249690 0.00194180 0.00194180 0.02721600 -0.84579000 0.00805670 -0.00339830 -0.00339830 -0.01574100 -0.79878000 0.78659000 -1.07680000 -0.85689000 0.03552400 0.79142000 -0.78707000 0.04117500 0.01796300 -0.02102900 0.04471500 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.807 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.807 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 8.55739975 13.88606186 9.36242386 9.99630894 1.77795619 10.96515946 -0.32517782 -1.90995958 8.83126100 9.05269004 NA 7.98461156 1.41169740 10.15453688 9.09471666 0.89716296 7.69342075 9.28270320 6.89069353 8.75512993 9.75750885 7.56146896 11.32386299 1.54922558 9.94894055 9.70817947 1.25972444 0.08976931 10.46917241 2.84468694 11.55663528 11.64869305 8.25971926 10.09647073 8.00567339 8.88258436 6.97853773 1.08976931 -0.91023069 1.25972444 9.03084174 8.13828102 10.16326625 4.25971690 9.19162532 5.49067281 9.53532632 5.73364990 9.68131643 NA 9.39585584 2.08980320 5.04399186 10.61121785 6.40090675 -1.90995958 9.14032289 7.92742184 1.41169740 0.41175163 13.30623680 1.08976931 10.23636274 NA 8.07421266 4.68970731 9.20223355 8.56856382 14.9152898 6.2190775 8.4004069 13.3000849 9.7732274 9.8346280 13.0600348 15.2786340 8.0356624 11.1187361 12.6719360 10.2465092 9.3047202 8.4637467 -0.9102307 6.8906935 12.2357262 11.2754439 7.4949356 8.9258443 9.1565559 9.5975887 10.6975867 5.5244210 4.0205289 11.8680766 5.0555775 2.7902299 8.4917401 7.8157394 11.5102807 10.3731718 7.6934207 8.8825844 14.3202461 3.7902299 9.8147342 9.7484518 11.6648605 9.0827324 10.6506045 9.1079943 -0.9102307 9.0519455 8.6598871 1.5492256 11.1142412 7.6366884 10.7921832 10.1256241 7.2496653 13.9159204 10.3113812 9.1672774 12.8819743 9.6123755 10.0436268 3.0897863 TCGA-B6-A0IN 45 1 2573 NA breast stage x t1c nx mx 2-10-2014 female 1996 NA NA other specify yes NA white not hispanic or latino 56.63.0 3 2 2 NA NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 2.503025e-07 11.3287889 7.0651727 7.0187132 13.3792691 1.7227720 9.5860817 1.7227720 9.2784650 11.0048759 8.9935762 9.4477815 6.6902131 8.3163051 9.7187493 7.5484204 8.9069474 9.5347283 10.2266061 7.5227557 4.9154253 10.4072785 10.0414846 13.8755632 9.8637926 9.2630469 10.5022653 7.0081821 9.8550047 2.7227720 1.2373802 8.4487552 10.2054443 13.1428910 8.9666344 14.1575947 12.7496002 9.4776678 4.4389848 NA 6.5878510 8.6141301 7.7324090 5.6158665 12.7952958 0.9580631 11.0549768 12.8027413 0.9154062 9.5358286 10.1514396 9.2674688 6.1538297 NA 14.8306088 10.9457477 2.3748447 7.2685719 NA 5.8102426 7.9570846 9.5565741 9.0702436 9.1739914 9.0778169 9.5041401 7.5843101 10.7114651 9.3469230 5.0447089 8.5209050 1.2373802 9.8659813 14.6078230 7.6524700 9.8783215 10.2619392 8.1845521 2.2373496 6.2552760 8.2283084 8.3666365 9.6141301 NA 6.0651716 6.6019253 10.0121405 10.9481599 5.3911594 6.2373534 5.5878510 10.2558320 11.7506863 6.1822116 14.0259903 3.2373496 6.9543441 10.9635717 12.3934366 12.0086779 7.6019260 12.5720738 10.8656168 10.0759271 10.0101629 3.0853567 8.5610840 11.3424764 11.8236304 -1.0846703 10.2513740 8.4814794 1.2373802 4.7227829 9.0778169 10.2435394 9.2630469 8.3583690 15.6704825 9.5966639 9.3717799 7.6669696 2.9154253 14.6960677 9.4497283 11.7223778 11.1547256 9.6339582 9.1478465 7.5592815 10.0804014 -6.5050e-03 5.4259e-01 5.4259e-01 -8.8526e-03 -8.8526e-03 4.8579e-03 8.0745e-02 5.5071e-01 3.1910e-03 1.0285e-02 1.0285e-02 5.6045e-01 5.3397e-01 -1.3858e-03 -7.7821e-03 -6.9195e-03 -6.9195e-03 -1.6429e-02 -8.2388e-03 -9.6987e-05 6.5262e-03 -2.3050e-02 -6.1662e-01 8.2647e-01 -4.9695e-02 -2.8218e-02 -2.8218e-02 2.7351e+00 -1.0792e-02 -6.5050e-03 -6.5050e-03 -1.2856e-02 -8.8526e-03 2.8460e+00 -4.0162e-03 5.8081e-02 5.8081e-02 -2.6988e-02 3.1910e-03 -9.4046e-03 5.1228e-01 1.0674e+00 -6.0352e-01 2.7428e-03 1.1819e-02 1.9418e-03 -1.0791e-02 -1.3858e-03 -1.3858e-03 -7.7821e-03 -6.9195e-03 -8.2388e-03 -8.2388e-03 -2.7724e-04 -9.6987e-05 -6.6226e-01 2.2725e-02 4.4411e-03 -6.1662e-01 1.5908e+00 8.1959e-03 -6.3953e-01 -7.9343e-02 2.6357e-03 -9.9609e-02 3.1572e+00 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.498 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.498 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 9.6019260 12.2477418 6.1052506 9.5003880 6.3743649 11.3740884 4.0028915 -1.0846703 8.0395469 9.2305751 NA 8.0265611 5.9815148 10.9652740 8.5301351 3.7734056 9.2100462 9.1775202 6.9433318 12.2964276 9.5777022 6.6296714 12.4605106 3.0853567 5.9815148 9.5041401 5.6019253 -1.0846703 11.3766491 3.0028825 12.8310248 12.6873275 9.1716342 9.9118989 7.6331020 10.2106205 4.0447089 5.9041107 NA 2.7227720 8.9252542 11.4560379 10.0915986 6.5301347 9.6856350 8.9140158 10.0619942 5.8342890 9.7227804 0.5003942 9.7538415 2.6158635 9.5466024 9.1503746 6.7814056 6.5447821 9.8601375 8.6279526 12.6746895 -1.0846703 13.7396384 0.9154062 11.2759982 NA 9.2294420 7.4152711 8.6786378 9.2065961 11.9791778 6.4700146 9.1052501 14.1575947 9.9203481 10.7231828 12.7952958 12.1896580 8.6935026 9.7467326 12.7440578 9.7577758 8.3666365 8.5116151 0.5003942 6.8102426 10.9069473 10.840609 5.237353 9.027865 8.773406 7.281747 9.457780 7.541135 8.320567 9.863793 7.312030 NA 5.722780 6.175357 10.118162 10.654362 7.837267 11.839496 8.471932 7.163353 9.070244 10.441436 10.225470 9.748315 10.178695 8.450701 NA 9.742546 7.161548 8.734008 10.948160 7.904110 11.129137 10.255832 7.387101 14.218314 10.693913 10.885531 13.185502 9.709029 9.460390 3.438985 TCGA-B6-A0IO 66 0 NA 3350 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 56.63.0 3 1 4 NA 2 2 1 1 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.084644e-06 3.893595e-07 12.20088420 3.56597486 8.10513118 11.87342616 -0.01902419 9.47619858 0.98097581 9.45674333 11.65151856 10.03764757 10.44963390 9.72416115 9.17904545 8.99688950 6.20340282 9.47819627 10.46179998 10.71430769 7.35604959 2.20338912 11.20078338 9.87986303 14.83709487 11.51612317 9.66867707 10.94799585 5.46213741 10.48019129 -0.60405978 0.39604986 6.10340742 11.40884643 12.68959082 8.37332717 12.31518999 12.73269335 8.75469847 6.92742836 3.91960705 4.87177959 8.71006389 8.96874742 6.13075793 13.29162261 5.84725784 10.58463617 13.92379921 2.20338912 9.44588227 10.91322460 7.93326575 5.92742954 -0.01902419 14.67208629 9.74032097 1.39604986 7.70893005 NA 2.20338912 8.70552353 10.92889022 9.28479056 10.06315884 10.23091340 9.88388730 0.98097581 10.27294791 10.66838554 5.42946867 8.68260525 2.39604986 11.69009364 14.66526534 8.78020510 10.74643404 10.63803047 9.64989474 1.20338912 6.15759755 8.68029306 8.86365293 10.02494848 NA 3.71797795 8.19532890 9.64456798 10.26139400 3.15093330 4.54579543 3.68144927 10.54801520 12.23692357 5.12396824 14.08478937 6.04709991 7.73589715 11.25402831 10.59357124 13.09219984 8.48880459 10.64219406 10.53719656 10.02631442 10.75387417 4.68144927 8.86670618 11.76018198 12.18802414 0.39604986 10.60975912 9.04530344 -0.60405978 3.92242623 9.27486452 10.99107168 11.21502888 9.17412449 16.78706430 10.94438762 9.85496653 8.86365293 7.32678450 16.10621474 5.09648536 14.39536473 10.72303851 10.67391589 9.16423167 8.81706007 10.31543581 -0.1830300 0.3672900 0.8154000 0.0000000 -0.0130890 -0.1294800 0.4187100 0.2340100 0.2340100 -0.0039635 -0.0039635 -0.0043785 0.2061300 0.2321600 -0.1998200 0.2089200 0.2089200 0.6857700 0.1165400 0.1763800 -0.2881700 2.6137000 -0.6345900 -0.4423900 0.7674100 -0.2302600 0.4988000 0.4988000 0.3847500 -0.2135100 -0.6154300 0.2095300 0.0035656 -0.1409800 -0.1395300 0.4187100 -0.4230500 0.2104500 0.2340100 0.2340100 0.2344800 -0.6423300 -0.0039635 -0.9340500 -1.2929000 -0.6144700 -0.6369400 -0.6239500 0.2230500 -0.1998200 0.2089200 0.6857700 0.0947760 0.0947760 0.2135100 -0.4337600 0.2456600 0.2241300 -0.6345900 0.4478900 -0.6146600 -0.6815500 0.4988000 0.4081700 0.2201200 -0.2263300 0.228 0.228 -0.200 0.009 0.686 0.117 0.214 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.385 0.385 0.220 -0.226 0.000 0.000 0.000 0.000 -0.129 -0.129 -0.011 -0.429 0.234 0.234 -0.391 -0.619 0.000 0.000 -0.614 -0.614 0.000 0.228 0.228 -0.200 0.009 0.686 0.117 0.214 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.385 0.385 0.220 -0.226 0.000 0.000 0.000 0.000 -0.129 -0.129 -0.011 -0.429 0.234 0.234 -0.391 -0.619 0.000 0.000 -0.614 -0.614 0.000 7.7926524 12.0864819 8.1154359 8.2555819 3.8554815 11.9735942 0.3960499 NA 9.5426160 7.2446702 0.7179999 6.7754259 2.7883725 11.2182198 9.4411245 3.6439716 6.3267854 9.8043771 8.3238253 10.1370928 10.0322188 8.2130308 9.5483322 0.4422269 10.1662983 9.8838873 2.0964980 0.9809758 11.0949690 2.6439716 12.9897886 12.9603755 6.4184143 10.5343191 6.5407062 10.0560432 6.0107575 -0.6040598 NA 1.3960499 9.1059928 10.5346391 9.7813705 2.9810124 9.1717645 6.5709729 10.1733026 2.5659627 8.9506361 -1.6038405 11.0383247 0.7179999 4.8879005 10.7553494 6.3154467 -0.6040598 8.7969267 6.4781969 4.0964896 2.2033891 14.1532029 -1.6038405 11.0075332 NA 9.3797535 3.7536045 8.4513298 9.4390745 13.9726344 6.6814493 8.4294703 12.3151900 10.9281597 10.8054383 13.2916226 13.5418601 9.2995904 11.1444499 12.9961925 11.0647108 8.8636529 8.3282620 -0.6040598 7.7134601 11.4790280 10.6173324 7.2066188 9.1197081 9.1575986 8.7134601 9.7237459 5.8958939 8.6224597 11.5161232 4.9506364 3.3960499 6.5201692 7.6160628 11.9568578 9.2640982 8.5214607 8.8988792 11.1619550 4.1774076 9.2847906 10.2532508 11.2299257 8.2431045 10.2786904 9.2025970 -1.6038405 9.6448526 7.7579913 2.9196070 10.2613940 8.3647142 10.5802842 10.5480152 7.4458955 13.6683126 10.4291261 10.5877234 13.1980082 10.1396195 9.1425618 -0.6040598 TCGA-B6-A0IP 74 0 NA 3374 breast stage ia t1c n0 (i-) m0 2-10-2014 female 1997 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 56.63.0 5 2 2 NA NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 8.343418e-08 10.7886157 5.7262917 7.3339738 11.6809798 NA 10.5055674 -0.8359861 9.6890800 12.1506018 10.3810975 9.9421258 7.3976686 9.2984750 8.7870155 8.0204744 9.3753286 11.1278479 9.4927237 6.8115070 2.3339675 11.0235835 10.4549315 9.6619005 11.1525558 9.7070804 10.5369137 6.0344138 10.5755597 -0.2510236 -0.2510236 7.4284917 11.7480716 12.7854137 5.6954288 13.3286021 13.4785257 9.5771476 6.9714033 3.6234806 6.1584017 8.7358014 11.3512460 7.6007604 13.1589324 1.7490193 11.0890467 13.7807411 6.2084431 10.1156976 11.0206687 7.6255284 4.4678272 -1.8359861 14.3536184 8.9454084 0.1640139 8.6827018 0.1640139 3.6876094 9.8342623 10.7090131 10.1105894 12.0204742 10.1363105 10.2019388 1.4859935 11.4159748 10.2438667 6.1355923 8.1738775 3.8919732 11.9986185 14.9372780 7.9870019 9.9038293 11.3228161 8.9802324 2.4119685 7.0000992 8.4644012 8.3339738 10.9480700 NA 5.1527351 7.2541613 9.4534912 10.8276068 3.9454111 5.6152603 4.2084392 10.3182339 12.0419079 0.9713688 13.5783044 6.2673373 7.4355119 12.9612542 12.4475711 12.9806323 8.6876105 10.3783678 10.8349261 10.9778619 11.3289556 4.6069929 8.4308351 13.2568471 11.5380013 -1.8359861 10.2607639 8.8015794 -0.2510236 4.0232731 10.2884931 11.4911802 10.0413328 9.2991166 14.9408286 10.0716904 9.9371878 8.9993095 2.6876206 15.8720346 9.6993240 13.1225561 12.4782778 10.4296637 10.0278478 8.6193760 11.1085082 0.00504260 0.63344000 0.70766000 0.01999000 0.01500400 -0.00616240 -0.00505650 -0.00809630 -0.00809630 0.00325750 0.00325750 0.00325750 0.00381570 0.00381570 0.00645370 1.24060000 -0.00281870 0.00534140 0.00000000 -0.00920060 -0.00062666 0.01272200 -0.00298120 -0.00298120 -0.00298120 -0.00519480 -0.00519480 -0.00519480 0.01077000 0.01021200 0.00504260 -0.00768210 0.01999000 -0.00616240 -0.00616240 -0.00505650 -0.00505650 -0.00809630 -0.00809630 -0.00809630 0.00214700 -0.00560950 0.00325750 0.00525240 0.00525240 -0.59463000 0.00450760 0.00381570 0.01300100 -0.00786560 -0.00281870 0.00000000 0.00000000 0.00000000 -0.00920060 -0.00062666 0.01272200 -0.59872000 -0.00298120 -0.00298120 0.04308300 -0.00519480 -0.00519480 0.01077000 0.00478550 0.01120700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1036280 12.9900012 6.4586691 9.9251843 3.6339310 11.2329948 5.7490113 0.7489764 8.9197709 7.5281829 -0.2510236 7.5307645 3.9969400 10.1094925 9.5077895 2.3339675 7.7952260 9.6372471 11.1947158 10.1860697 9.6345092 7.4494508 10.3563415 2.1640461 9.8881361 10.2019388 3.4119821 NA 10.9513391 3.8364695 12.8663296 12.1849418 7.4000631 10.0720659 7.1668640 9.4355117 3.6234806 1.3339961 0.9713688 3.9714056 9.3544907 10.0386458 9.9474562 4.6718425 8.4466276 5.8079036 10.7270065 5.3928669 9.6142289 -0.8359861 12.3129224 1.3339961 4.1864134 10.0220491 6.3692065 6.3087067 8.4048401 6.9021411 7.0157975 -1.8359861 13.9878637 0.1640139 10.1745767 -1.8359861 9.1491791 4.7639639 8.0048266 9.3747200 14.685142 5.262080 8.538001 13.328602 10.342714 10.902774 13.158932 12.963786 9.528791 10.581110 13.089603 9.120425 8.333974 9.681226 0.485942 7.483721 11.068495 11.2313149 7.5303712 9.2751843 9.1513127 8.7695281 10.5564063 7.6111318 8.2084426 11.1525558 6.1808560 2.9714056 8.5787338 7.0776863 9.8479205 10.5955463 7.3035999 8.6111318 12.4400276 6.4540673 10.1105894 10.4134585 11.2287914 9.5633265 10.8224833 8.9560256 0.1640139 9.6023051 5.8463404 8.4972040 10.8276068 5.9454087 10.9992010 10.3182339 7.5197078 14.4785080 10.2630676 10.5617233 12.8885092 11.1325355 10.3479941 -0.2510236 TCGA-B6-A0IQ 40 0 NA 4285 breast stage iiia t3 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 56.63.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 9.733988e-07 2.503025e-07 11.6430944 1.8477164 6.7098517 11.6237528 NA 8.9413687 -0.7372061 9.5307257 11.9191935 9.7556232 10.3565162 7.5619768 8.3686771 9.8383078 8.8401976 9.0259808 9.3778122 10.2001425 8.2242183 6.3234637 11.3459155 9.1530329 12.0425905 10.9787306 10.0134757 10.7214315 5.7705621 10.1692834 -1.7374466 3.2627639 7.1875807 9.8825301 12.5045068 7.8192748 11.5535075 11.5783428 7.3180511 7.4074267 3.6890307 6.9770143 9.5423792 7.5869493 9.9214264 6.9527669 NA 10.1207497 11.2238565 10.5011734 10.0600248 11.1209440 6.0893181 3.8774792 1.0701145 13.4632447 11.2069316 3.0176547 9.9307672 9.2191448 5.3071625 9.2968797 9.9289926 9.4897827 9.5154341 9.3429200 10.0600248 NA 10.4837515 10.6766609 5.8993932 6.6159150 7.9440069 9.0498548 14.2306478 8.1982579 10.7668428 10.3571762 9.1905465 -1.7374466 -0.7372061 9.7921991 8.7626146 10.1927667 -0.1523237 3.9906917 7.3739039 11.7731619 10.4099735 6.2906751 5.5106961 4.4525954 6.9316535 12.8309623 3.7222037 12.7293550 5.9281050 7.1696595 10.9795881 13.8755795 12.9227645 5.9281050 11.1677795 11.5868085 11.0715317 11.1503700 3.8774792 9.5914436 11.5782012 7.2989424 -0.7372061 10.2694453 10.0873297 1.4326922 5.0326739 9.6716290 9.4556778 9.8321497 8.8839049 14.6978691 10.4948897 8.4513574 8.9727139 1.4326922 11.2386166 9.5254507 12.2831409 12.5144729 10.6186703 10.8763279 8.2613592 11.4051182 0.1103800 2.4562000 1.5588000 -0.3941700 0.4196500 -0.4055000 0.2942100 0.0884030 -0.0321150 -0.4116800 0.0065262 0.5633000 1.0134000 -0.3980800 -0.0511810 -0.0071958 -0.0071958 0.2189900 0.0093098 -0.3967500 -0.3938600 -0.5382500 -0.3332500 -0.3332500 -0.3332500 3.6569000 0.2849600 0.1330200 0.1547200 -0.5059800 0.1103800 0.4194900 -0.3917400 -0.4055000 -0.4055000 -0.7389200 0.2820000 0.0884030 -0.0269880 0.0793030 -0.4217800 0.0151680 -0.4270200 0.3569200 0.3569200 -0.4174200 -0.1676400 -0.3980800 -0.4517400 -0.0511810 -0.0071958 0.0924600 0.0093098 0.0093098 -0.8336500 -0.3835800 -0.8649200 -0.4010800 -0.3332500 -0.3332500 0.4747800 -0.3053400 -0.2837000 -0.0583270 0.4418900 -0.3937500 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.122 0.475 0.000 0.247 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.287 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.122 0.475 0.000 0.247 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.287 8.0309529 12.5015465 6.4722213 9.4963882 3.5846980 13.1184644 1.5846739 2.4326922 9.5283836 12.7748300 6.1515118 7.4891808 7.4150538 10.8763279 11.3061378 2.4326922 5.8774792 10.1172475 7.8866501 10.2115008 8.1283006 7.7201492 11.2925734 -0.7372061 8.2865231 10.0600248 4.1454085 NA 9.9334248 3.7222037 13.9931061 12.8990534 7.3555255 9.9276603 10.0138942 10.4516665 4.8019295 1.8477164 -0.7372061 6.5573886 9.6126028 9.4764803 6.4226400 2.5106835 9.1224354 6.0375557 9.9343096 5.7139789 9.9825852 7.1756583 12.1094343 -0.7372061 5.7784688 10.2840853 7.8757844 6.8774780 8.3907631 8.3621165 9.4276755 3.5481653 14.7241361 1.2627939 10.7400210 NA 9.6453926 5.6806197 8.7108849 8.1160783 13.2182514 9.1583438 7.9138205 11.5535075 9.7912226 11.7911006 6.9527669 8.9606050 9.4016804 11.0673030 14.6180509 12.1874884 8.7626146 8.7088180 0.2627939 7.7119175 10.2169649 11.3355711 4.6026172 8.4903603 10.9147172 8.6942663 10.4214256 5.9492688 4.8626795 10.9787306 11.0431033 -0.1523237 10.4682564 9.0083505 11.4075862 9.5118821 8.2429083 9.4301868 6.2343116 6.6721594 9.4897827 10.2198707 11.8430272 10.8493739 11.0153583 8.4538278 NA 9.1829428 5.5388920 8.9129229 10.4099735 3.7863350 11.3095090 6.9316535 7.8941824 15.2411439 9.8192746 10.5186824 11.9839746 12.2193263 9.2592421 7.0109611 TCGA-B6-A0RE 61 0 NA 6435 breast stage x tx n0 (i-) m0 2-10-2014 female 1989 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 61.60.0 4 4 4 1 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.220179e-06 6.938058e-07 11.5301435 1.9480027 6.1574541 10.9488466 NA 9.8963687 0.9480027 9.0354645 10.8957846 8.3403188 9.3437498 7.7884645 8.1259192 10.0301505 7.0226785 8.8022465 9.7890941 10.6871071 9.1398010 2.7959955 10.0565260 11.2721821 13.1517166 10.0997792 10.0189275 10.1471830 3.7135309 10.6830498 2.4334402 0.2110122 6.3742657 11.1906993 12.5532958 6.4652774 11.6119154 11.4902596 11.6454904 6.8109482 3.7959955 7.3505874 8.5494008 8.6908162 9.0301507 6.2035027 NA 11.6366016 11.7604997 6.0607024 9.5313702 10.0875529 7.3909454 5.3942569 -0.3738880 13.3916952 10.1318850 2.7135419 9.1239253 1.9480027 3.9114711 8.6799994 10.6823724 9.2526950 10.5415794 8.4008607 9.9934881 6.1574541 10.5231626 10.5083344 2.6260653 7.3125735 0.9480027 7.5773578 15.0924367 8.2038046 10.4844430 10.3055536 11.7070575 2.0854926 NA 8.6894687 8.8367447 11.1479192 NA 5.1338676 8.7770899 10.5083344 10.9434860 5.4840543 4.9836275 5.5087170 8.6047837 11.6891314 1.7960162 13.7787148 3.5802661 6.8975369 11.8566944 14.2558854 12.3076413 7.1959292 10.3662759 10.7890941 10.2100963 10.2878516 4.2984970 8.0418152 11.6928354 8.3037931 2.3265086 11.3730076 9.7469593 1.2110122 3.0190792 8.8716262 9.6004879 10.3291118 9.3633207 14.6890050 11.0952065 9.7254213 5.4462529 1.9480027 11.9677313 5.6147570 11.3416065 13.0498459 9.9264260 9.5434454 7.6004883 10.3837926 0.767920 1.485300 0.466920 0.131990 0.000000 -0.456360 1.111500 0.034959 0.039740 -0.195500 1.914200 0.657000 2.123000 -0.189230 0.112770 0.110810 0.110810 0.549300 -0.455650 0.408610 -0.452540 -0.457010 -0.425820 -0.406390 0.979560 -0.027124 -0.027124 -0.027124 0.196390 -0.388170 0.054091 -0.418050 0.135100 -0.458540 -0.470880 0.028200 -0.548050 0.034959 0.034959 -0.489740 0.746700 0.212250 -0.288570 0.556020 0.556020 -0.163450 -0.686330 -0.189230 -0.189230 0.119020 0.040044 0.077430 -0.455650 -0.442750 -0.477020 -0.810960 -0.428550 -0.421670 -0.425820 -0.406390 -0.362090 -0.027124 -0.027124 0.349250 0.242640 -0.393190 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 -0.453 1.416 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 -0.453 1.416 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 6.9344127 13.3567558 6.7450141 9.3143238 1.2110122 11.7901947 -1.3740750 7.6704679 9.1038317 7.1768204 6.6090664 7.5744406 5.7135364 10.7277209 9.3454622 1.7960162 5.7345985 10.9953982 7.1018066 9.7075569 9.3600209 6.4008607 10.8536894 0.2110122 9.4245453 9.9934881 3.3265086 NA 9.8251323 3.4840608 13.1972928 12.4461526 8.0793440 9.8566944 8.0375843 9.7372091 3.3265086 1.6260653 -1.3740750 -0.3738880 8.4156070 9.4887108 8.2536074 3.9114711 10.1549133 7.0439263 11.1308924 4.4334269 10.0977486 3.0855096 12.4652772 2.0854926 4.1496333 10.4169147 8.5116021 5.7345985 7.7707319 5.7656249 7.5568110 5.9206935 13.5392901 -1.3740750 10.6827112 NA 9.7055583 3.6704665 9.1564798 7.5831753 12.926599 8.805982 7.936686 11.611915 9.780202 10.790352 6.203503 9.567121 8.802247 10.803804 14.243340 12.016780 8.836745 8.410708 2.626065 7.948002 11.206568 10.197826 5.591859 9.260884 9.248125 8.056526 9.146329 6.203503 4.815898 10.099779 11.276228 3.580266 8.574441 8.095837 11.949973 10.801935 8.190223 9.911476 7.998938 5.269931 9.252695 9.870437 11.093934 10.502974 9.857295 9.049189 1.211012 9.861645 6.550885 7.052339 10.943486 6.702889 9.900370 8.604784 6.439854 14.489389 10.257705 10.528449 12.301369 12.070830 8.519375 2.433440 TCGA-B6-A0RG 26 0 NA 2082 breast stage iib t3 n0 (i-) m0 2-10-2014 female 1991 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 61.60.0 3 1 1 2 3 4 1 3 3 2 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.056833e-06 2.503025e-07 10.84547523 4.48273214 6.72374285 11.44668137 NA 9.50711852 NA 9.54097209 12.23077471 6.72374285 9.77065663 7.35869339 9.45793097 8.92567786 7.36315268 9.14871629 10.01694879 9.60167553 6.08939222 0.60824151 9.31677434 9.48170944 14.51534370 10.96764877 8.61762725 10.50409299 3.27123143 10.76181731 1.02332633 0.60824151 6.38962532 11.35057471 12.95902032 8.63248162 13.24103332 13.02919043 7.08939222 5.08939222 1.34522604 5.34522958 8.04844219 9.91963520 8.30870489 13.41776547 2.72373329 10.42151198 14.86065968 3.41562348 9.82727235 11.78672262 7.60826517 8.22297502 1.34522604 12.73832632 7.81976397 0.60824151 7.56246148 3.77818755 4.11076412 9.50711852 9.55565877 8.64168836 11.40916518 9.13704492 9.52911426 2.34522604 10.66264346 9.91356697 5.70980343 8.12921140 1.02332633 11.89943597 14.22309012 7.98582316 11.12001789 10.83708394 8.53307777 NA 7.67435472 6.56246225 9.44851859 11.22970670 0.02332633 5.49903584 7.66354743 8.95404011 10.98728256 9.16285402 3.60826517 3.77818755 10.37479422 11.94216600 6.53900212 14.07366162 6.48273375 7.42418225 12.79994141 12.61435755 12.75409130 8.40700725 10.79231406 11.14127050 10.09850786 10.06906249 4.23275284 8.79808973 11.82824044 11.46079477 1.34522604 10.34466719 9.06769679 2.48274505 3.03049500 8.73926486 10.66354770 10.92454680 8.33845249 15.65914840 10.17558760 9.70805132 8.40051317 0.02332633 16.19850143 9.04567067 12.71711639 10.18820964 10.35141665 9.54293899 8.13964651 10.47526590 0.0282000 0.8168800 0.8251700 0.0824760 0.7512700 0.1291800 0.0523830 0.9235100 -0.4053900 3.6569000 0.8633400 0.8633400 -0.0414310 -0.0414310 0.7410000 0.0225850 0.0535210 -0.0712050 0.0105640 0.9194600 -0.0024938 0.2325600 -0.4577900 0.4449400 0.9489500 -0.0317680 -0.0317680 -0.0317680 0.1033700 -0.8598700 0.0282000 -0.0257560 0.0824760 0.0748400 0.1291800 -0.0462680 -0.0587310 0.9235100 -0.4053900 -0.4053900 -0.4356100 0.0489720 -0.8909700 -0.0332690 -0.0332690 0.0076392 0.0468420 -0.0414310 -0.3299400 -0.8817100 -0.8901500 -0.1295300 0.0105640 0.0105640 -0.3913900 -0.0086556 -0.5143400 -0.8626300 -0.4577900 0.4449400 -0.9634400 -0.0317680 -0.0317680 -0.0077482 0.0044446 -0.6657800 0.000 0.000 0.000 -0.858 0.000 0.000 -0.375 0.000 -0.282 0.000 -0.863 -0.458 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.129 0.129 0.000 0.000 0.000 -0.340 -0.436 0.000 -0.891 -0.028 0.000 0.000 -0.162 0.000 0.000 0.000 -0.858 0.000 0.000 -0.375 0.000 -0.282 0.000 -0.863 -0.458 -0.013 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.129 0.129 0.000 0.000 0.000 -0.340 -0.436 0.000 -0.891 -0.028 0.000 0.000 -0.162 7.5624615 13.2733791 7.7613950 9.9767717 0.3219281 11.2962241 1.0233263 1.0233263 8.5051021 7.7272064 NA 7.6635474 3.6671541 10.8820609 8.9789527 2.7237333 7.2327557 8.9614121 6.8498517 10.5740496 9.7751732 7.4620949 10.0183632 NA 9.7167898 9.5291143 3.0233086 4.3808541 11.1522637 3.0233086 12.3149052 12.1706667 7.4199079 10.1806496 8.1957305 9.6007316 4.0676989 2.7237333 1.6082888 2.9301885 9.5997872 10.4719354 10.3259417 3.4156235 10.2152873 6.6232158 10.0345301 5.7914859 10.3081268 NA 10.4236485 2.9301885 4.6380101 10.0578473 7.5757797 2.3452260 9.3418457 6.0119875 6.2521223 6.6743547 13.8529760 1.0233263 10.4129341 1.8306610 7.7580126 4.0676989 8.6653544 8.3017522 14.236154 5.652659 8.634328 13.241033 10.832669 10.880895 13.417765 12.835480 9.232756 10.310438 12.668286 11.123308 9.448519 9.897516 NA 7.974587 12.906328 10.9872826 6.8812841 9.6992598 9.3918092 8.7289351 10.3547796 4.8046628 8.3110153 10.9676488 6.4990358 2.8306610 6.6743547 7.1498528 9.8322669 9.4714192 9.7956173 8.4868270 11.0816328 3.5468698 8.6416884 10.3620391 10.7499467 9.0062963 10.6255376 8.8843897 0.6082415 8.7330930 7.0164105 4.4827321 10.9872826 6.0345305 10.9192566 10.3747942 6.6743547 13.3255847 9.7840228 9.5360432 12.5876905 10.6389324 9.1500072 2.3452260 TCGA-B6-A0RH 51 0 NA 5749 breast stage iia t2 n0 (i-) m0 2-10-2014 female 1991 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 85.58.0 6 3 3 NA 3 3 1 2 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.952849e-07 1.668684e-07 11.26712639 2.04491864 5.86085109 10.90187943 -0.53993898 8.57371497 -0.53993898 9.02697817 11.48891477 10.27375388 8.96677623 7.73842198 8.04305573 9.85014166 8.04305573 10.13637059 9.60016343 9.66270878 6.93164760 1.04495360 10.32763763 10.74335053 12.84570034 10.66698705 9.17679224 10.04728140 5.95182555 10.41052863 2.62989279 4.88623797 6.30546352 9.78133709 13.60327622 8.93469282 14.95528127 12.26077155 10.16776322 5.51525514 0.04488368 6.33033789 7.36986601 9.74595275 7.73143580 12.99743382 NA 11.39734654 13.70797439 7.17077934 10.34935886 10.97739606 8.05616243 6.41997534 0.04488368 15.44052437 7.41997450 0.04488368 8.15867734 NA 4.41416937 8.53143527 9.38032556 8.99037914 10.18874361 8.74883890 10.10833025 1.78190521 10.36535977 9.59696383 7.64979722 8.06915166 12.58828933 10.82875200 14.81268864 6.90994707 10.01599968 10.21067974 8.72206773 5.50436615 3.54743749 8.78640229 9.09205914 11.80620941 NA 5.08932865 7.90084206 10.02364570 11.57907599 5.89460195 4.78189997 4.54743749 9.82081989 11.91478608 1.26735601 13.34609796 6.79088930 7.29917687 11.59263311 13.88042645 12.64647391 8.06359893 10.67368450 10.18235338 9.01086374 10.55536975 2.45998236 9.30937790 13.82311505 11.21109831 0.45995614 10.61605576 9.40175397 2.91939729 3.69493589 9.73667877 11.32686526 9.97813412 9.43510411 15.93781003 9.15607094 9.24051254 7.88623736 6.84798939 16.03280616 9.45220293 12.90937935 12.15313297 9.95832332 9.77115335 7.67186088 10.48894584 0.01516800 0.96535000 1.03980000 -0.01354000 1.32580000 -0.58992000 0.02202400 0.00819590 0.00819590 -0.60632000 -0.60632000 0.61975000 0.02118300 0.02118300 -0.00526100 -0.00526100 -0.00526100 -0.60293000 0.50030000 -0.00097017 0.01796300 -0.02318900 -0.60709000 3.65690000 0.10143000 0.00416320 0.00416320 0.00416320 0.53309000 0.01698500 0.01516800 -0.59507000 -0.01354000 -0.58588000 -0.57881000 0.02202400 0.02202400 0.00819590 0.00819590 0.00819590 0.01153900 0.01153900 -0.60632000 -0.00705760 -0.00705760 -0.00705760 -0.00975410 0.02118300 0.02118300 -0.00526100 -0.00526100 0.23798000 -0.58176000 0.11418000 -0.00097017 0.01796300 -0.00798350 -0.59643000 -0.60071000 -0.60526000 0.03905400 0.00416320 0.00416320 0.47456000 -0.58912000 0.02707600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.469 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.469 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 7.8608523 13.5098638 6.4988923 9.0801926 1.7819052 11.0847682 -0.5399390 -1.5399390 8.4864960 8.9060220 NA 7.5737146 4.1604120 11.4349250 9.2793536 2.4599824 5.3426152 9.0847683 7.2413321 11.4755620 8.7819010 5.9677681 11.4980344 NA 7.4933960 10.1083303 4.2928627 0.7819052 10.5837708 1.9194164 13.7679917 13.2009656 8.4443913 9.7540191 12.1892748 9.9642952 4.3426187 1.6298928 NA 9.5560289 8.3318781 10.0514951 9.7226549 2.4599824 9.1122800 7.7007643 9.4148960 6.5943993 9.2920715 NA 10.1051808 4.1038249 3.9518302 10.4955142 7.8953099 5.2413330 9.2106796 6.6448484 9.1172911 2.5474252 14.6944534 NA 9.9013608 -0.5399390 8.9049877 5.9437877 7.7886479 8.9737002 13.342756 6.167332 7.712638 14.955281 10.288109 11.507949 12.997434 11.602399 9.070075 9.279354 13.323965 9.187893 9.092059 10.997434 -1.539939 7.743061 10.718833 11.127084 4.726760 8.816425 9.906022 7.664544 9.926253 5.717361 7.041173 10.666987 8.582801 2.629893 4.935705 6.305150 11.276156 10.159979 7.476781 9.925539 8.780773 5.305464 8.990379 10.991598 10.015041 9.112818 10.735806 8.037401 5.951826 9.545186 8.948385 6.089329 11.579076 7.267328 11.435821 9.820820 7.440113 14.394124 11.051261 10.704931 12.254896 11.242152 8.835012 3.044936 TCGA-B6-A0RI 44 0 NA 7126 breast stage iiib t4b n1b m0 2-10-2014 female 1992 NA NA infiltrating ductal carcinoma yes 6 white not hispanic or latino 61.60.0 5 1 2 2 NA NA 1 3 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 5.562279e-08 11.0936976 3.8908260 8.6526686 11.2487629 -1.6326289 10.2950444 0.9522590 10.0357083 12.3519519 8.9874863 10.0236913 7.3416807 8.3243687 9.0343781 8.6187489 9.2143237 10.7940554 9.5048980 6.8829658 0.3672592 10.7204133 10.7126717 13.5804467 9.9929753 9.3791925 10.1918275 3.9218552 10.8256731 -0.6326289 1.6892097 8.0607532 12.2027248 12.6838443 7.4061854 12.3300721 12.5929258 9.9819763 5.8429989 1.1745982 6.3388095 8.4757910 7.7093410 8.2033167 13.1252814 2.7595820 11.2907797 14.1872709 4.7423081 9.7489717 11.4860453 6.5912680 4.3445445 NA 13.6539325 11.1872459 2.2741424 7.0002615 1.6892097 2.6891873 10.0254779 10.3882464 8.7488094 12.7766574 9.9727459 10.4984804 -0.6326289 11.5956342 10.4225489 6.9856518 8.3141726 1.3672592 11.7222045 15.0263704 9.4125415 11.2234974 11.0892201 8.7798362 1.8266807 1.9522217 8.4991236 8.8440127 12.5487294 -0.6326289 6.8307903 7.7159949 9.9242515 11.4303244 7.5421923 5.6151926 5.2861308 9.7830082 11.8295131 3.0111199 13.8982823 6.4913882 7.3243687 12.4508289 13.2760813 13.0813510 8.5755007 9.9713563 10.9639222 10.2950000 11.4827979 4.5570914 8.7724079 12.4146460 12.4207682 NA 10.6419359 8.9681086 0.6892097 3.6186028 9.4034401 10.3924061 10.5481080 9.0066072 15.0396918 10.7482686 9.1754263 8.6778792 2.0677075 15.1465626 10.1288177 14.0233840 11.3436516 10.4623338 9.5157430 8.5669388 10.4866616 0.0097140 0.7717400 0.7717400 -0.0196020 -0.0196020 -0.0220720 -0.0190530 -0.0230750 -0.0230750 -0.0081760 -0.0081760 -0.0081760 0.0000000 0.0034551 -0.0128650 -0.0128650 -0.0128650 -0.8013700 -0.0102460 0.0157130 0.0016507 0.0151970 -0.7810900 0.0215900 -0.0022304 0.0148750 0.0148750 0.0148750 0.0696550 0.0097140 0.0097140 0.0279050 -0.0196020 -0.0220720 -0.0327820 -0.0190530 -0.0190530 -0.0087281 -0.0230750 -0.0230750 0.1503800 0.1503800 -0.0081760 -0.0034763 -0.0034763 -0.0034763 0.0187890 0.0034551 0.0034551 -0.0128650 -0.0128650 -0.8013700 -0.0102460 -0.0102460 0.0157130 0.0016507 0.0157130 -0.6194300 -0.7837100 0.0215900 -0.0077617 0.0148750 0.0148750 0.0520850 0.0052612 0.0469700 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 8.69818340 14.58738025 8.53468457 9.76654448 2.61520440 10.70767300 -1.63262893 -0.63262893 8.69930315 8.80085202 -0.04781556 7.69133455 1.68920969 10.13420939 9.29430369 3.49655183 6.43872866 8.82053704 10.35524096 10.26246299 9.46990490 7.75743535 10.13006379 3.35094979 8.89474351 10.49848036 7.61519410 -1.63262893 10.43234594 1.95222173 13.39629482 12.37901786 7.52965778 10.08065300 8.29948142 9.28090390 4.43335342 2.82670101 1.17459817 6.07462531 8.55955911 10.07462558 8.89572068 3.01111989 8.22236843 6.28612893 9.56693880 5.46529865 10.06249480 -1.63262893 9.48490967 3.45472864 3.36727321 9.72393854 6.19292401 1.53719665 8.99388802 6.91801287 7.20331668 5.02547624 13.72234222 NA 10.39724379 NA 9.24301590 2.82670101 7.80605849 8.23917174 13.395000 5.355950 8.495261 12.330072 10.582799 10.560484 13.125281 12.870720 9.629949 10.013825 13.020447 10.287247 8.844013 9.542816 1.537197 7.566939 11.383204 11.263599 7.132138 9.084943 8.660738 9.239172 9.990650 6.406186 6.168167 9.992975 6.422549 1.537197 6.200157 7.620594 12.270207 10.177035 9.378494 8.652669 13.618157 2.952222 8.748809 10.394827 11.293562 9.825673 10.754207 9.847552 -1.632629 9.101002 6.444082 3.496552 11.430324 8.208045 10.429987 9.783008 7.262085 13.555198 10.210795 9.607461 13.224567 10.907879 9.673898 1.174598 TCGA-B6-A0RL 60 1 2469 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 1993 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 72.63.0 3 1 1 3 2 1 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1631658 NA 6.9577719 11.7490958 -0.7004037 10.5253703 NA 9.5439240 12.0613193 9.8353217 10.5400535 7.1481837 9.5539984 9.5468945 7.7833761 8.1989174 10.3629554 9.2861134 4.2537548 NA 11.0650536 7.7569412 13.3432284 12.6690895 8.7752936 10.3333273 0.8845588 10.3412195 NA 1.1068843 3.2995670 8.9252690 12.6058356 9.2361982 13.7491281 13.4244489 8.9434165 6.4543783 1.1068843 9.9515088 8.5849625 5.5283775 4.2537548 13.5133480 -0.1154412 7.8522292 15.1829911 -0.1154412 9.4346090 11.2639011 8.2967396 5.5283775 1.2995377 13.5181723 4.4288459 5.3548435 8.5895792 3.0000000 0.2995963 9.7440576 9.8618026 9.7559147 10.5346770 10.1706955 9.2846906 -0.7004037 11.1966494 10.8910826 7.9361850 7.0511045 4.4893824 11.7175446 14.0103936 6.8160480 11.9715436 11.1898246 8.7466436 NA 2.8845198 8.5698556 8.6789388 10.2581130 -1.7004037 4.4893824 7.3412190 11.0462845 9.6388536 3.3870178 3.2995670 4.4080868 9.7163579 12.2778239 6.8348351 13.4026022 6.8957498 8.0809198 10.7226762 12.0767128 14.6581771 8.4249737 10.2139454 10.9147301 10.6110248 11.1344263 5.2868811 9.4048142 11.2374857 12.8156296 0.2995963 10.6041968 9.3009684 1.6214776 4.1362406 8.8826430 10.1745416 9.5924570 9.6371822 15.6564850 10.7831241 9.7041696 8.7300129 NA 15.2927972 5.3763772 11.1344263 9.4619517 10.6502232 9.8769891 8.3817095 10.9110001 -0.5452000 0.4901200 0.5198300 0.0000000 0.0000000 -0.2519800 0.0405020 0.0037803 0.0037803 3.6569000 3.3137000 0.0362640 0.0192570 0.3243500 0.0117130 3.6569000 3.6569000 0.0019756 0.0019756 -0.8377500 -0.2680200 0.0255820 0.0717130 0.0717130 0.0717130 -0.9022700 0.0271100 0.0271100 0.9396100 -0.5200700 -0.5452000 -0.8033300 0.0000000 -0.2781400 -0.2519800 0.0253750 0.0253750 0.0037803 0.0037803 0.0386640 0.0080906 0.0259860 -0.9521000 0.0044749 0.0044749 -0.3673400 0.0233200 -0.6139100 -0.9025700 0.0209370 -0.9223200 0.0019756 -0.0030023 0.0117130 -0.8410000 -0.2680200 0.0257050 -0.8957100 -0.9164200 0.0717130 -0.1874500 -0.8786600 0.0271100 -0.9206800 -0.0418050 -0.8823100 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.105 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.105 5.5941813 8.7722512 8.4694851 8.3548426 2.6918691 11.6262707 -0.1154412 NA 8.9657843 7.0103670 -0.7004037 5.7507726 1.1068843 10.2038185 8.8882751 6.5427347 5.8769884 9.0980321 7.8348357 10.8788762 9.6485152 7.9719855 6.7174132 0.2995963 9.5838060 9.2846906 -1.7004037 1.1068843 10.7386120 3.4288392 11.4727689 11.8082216 2.6918691 9.8802899 8.7226761 9.9452188 3.1069178 -0.7004037 1.1068843 6.3923174 8.1261087 9.0619422 9.8348357 NA 7.6032042 8.2566625 9.9528532 4.6571140 9.8637098 0.2995963 9.2639011 -0.1154412 3.2537624 10.2658711 7.1389527 -0.1154412 9.3622809 4.3219281 4.4694823 2.7589853 13.7220193 -1.7004037 10.5147899 NA 5.7089514 1.7589853 8.4080847 8.5029082 16.950071 7.017237 8.047753 13.749128 9.318456 10.977500 13.513348 12.484591 11.306796 10.637461 12.609747 10.332295 8.678939 8.209453 1.621478 7.777318 12.801895 11.857263 7.135611 8.439112 10.205699 9.755401 11.095525 3.914268 8.929827 12.669089 8.643856 NA 5.899473 8.429024 11.072287 9.152870 8.972869 10.032152 11.643440 2.000000 9.755915 10.290728 11.881467 10.085013 11.080100 8.209453 1.106884 8.489842 4.823123 1.758985 9.638854 1.758985 11.417690 9.716358 7.989715 13.234858 10.082968 9.273975 12.229004 9.802392 10.435911 -1.700404 TCGA-B6-A0RM 57 1 2373 NA breast stage x tx nx mx 2-10-2014 female 1993 NA NA infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 72.63.0 3 1 2 2 2 1 1 1 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.16884188 6.94899207 7.23553944 11.87592659 NA 10.29909042 -1.52284079 9.29669738 11.79825801 12.57625326 9.97766044 7.76963820 8.81827923 9.20693718 8.15503627 8.66590542 10.98906909 9.01550537 6.06227933 2.06229444 10.73499898 8.71691512 12.97660182 8.20523708 9.20523683 10.51623543 4.52171036 10.01937139 0.06225989 2.79925312 6.33529745 11.57007361 13.06374582 7.90985829 11.49377656 13.61558827 9.24632780 6.19156265 1.47731467 8.68066438 8.56345256 10.24839323 8.00479350 13.37709822 4.03190682 8.76502879 14.33835490 3.83487299 10.08645831 11.93751635 3.93675099 4.45459706 0.79925312 12.86042065 7.56983587 -1.52284079 8.74877954 1.28469179 5.33529745 9.53124245 9.82272170 10.01792887 11.62896729 9.52784545 9.66714100 0.47736648 11.13619735 9.93469739 7.19156166 6.44885966 12.24104757 12.28033761 14.42234873 6.98780403 11.81019219 10.64567518 9.42932974 NA 1.79925312 7.19841557 8.82161233 10.41983096 NA 5.34767983 7.52171036 10.85045355 10.19413594 5.06227717 4.72524491 3.28467699 9.91194469 11.89780307 0.47736648 13.24761902 5.21878504 7.43441890 11.54088010 9.28547620 12.75111206 7.98114197 10.22172993 10.66095187 10.66250167 11.26358611 4.79924276 8.63339960 11.58828907 12.69580404 -1.52284079 10.37818332 10.07443787 -0.52263352 3.06288155 9.95507475 11.61494808 10.69406235 8.90985829 15.23812737 10.43260307 10.45423852 8.74877954 2.17775837 16.64192392 5.31020559 11.80753311 11.69391077 9.72642986 9.69284945 7.88670743 9.95314619 -0.00138580 -0.00138580 -0.00346270 0.01296500 -0.00904320 -0.00678130 -0.00620670 -0.00576590 -0.00576590 2.31150000 2.31150000 3.11840000 0.01140000 0.00958830 0.00013863 0.00013863 0.00013863 0.00388540 -0.00242410 -0.00733390 0.01126100 0.02398700 0.03495900 0.03495900 0.03495900 0.04542400 0.04542400 0.04542400 0.02230400 0.02595200 -0.00138580 0.00000000 0.01296500 -0.00678130 -0.01711600 -0.00620670 -0.00620670 0.01768400 -0.00576590 0.00388540 0.01405100 0.00097064 -0.93652000 -0.00699890 -0.00699890 0.00458000 0.02904400 0.00958830 0.00958830 0.00013863 0.00013863 0.00388540 -0.00242410 -0.00242410 -0.00733390 0.01126100 0.01697900 -0.92786000 0.03495900 0.03495900 0.00776650 0.04542400 0.04542400 0.00842560 0.01242200 0.04230700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.198 3.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.198 3.118 0.000 0.000 0.000 6.8171666 11.8550693 8.7992447 8.9316157 3.7847448 10.0832589 1.0622599 -1.5228408 8.6384482 3.7992428 NA 5.4885439 3.5647806 10.3298460 9.2644027 3.3352974 7.6065992 9.0232462 11.4019435 11.1627223 9.2408276 7.3259395 9.0911058 1.3010608 10.6928495 9.6671410 4.4315160 NA 10.8121484 3.1777584 13.1473641 11.8848498 8.3086239 10.1408746 6.9489921 9.3243739 2.8696346 0.4773665 -1.5228408 0.4773665 9.7563467 9.7335252 10.3687204 3.8348730 7.4463001 7.7252442 10.8199467 6.6769895 9.4574560 NA 11.2588811 2.3842156 5.4198321 9.4233017 6.0586672 2.5647684 8.9510221 8.3961796 6.7810974 -1.5228408 14.0053737 9.7534409 10.2149864 -1.5228408 8.1030255 4.5434031 7.6014380 7.5189757 13.976363 3.969169 8.523076 11.493777 10.025175 10.047647 13.377098 12.982384 9.233039 10.442379 12.292199 11.178406 8.821612 6.753441 3.834873 7.445983 11.236581 10.889092 8.879263 9.030946 9.873921 8.782238 10.759148 5.521710 8.659711 8.205237 6.748779 1.936742 7.451731 6.676449 8.189843 9.748780 10.804027 9.006747 10.352682 4.092030 10.017929 10.599821 12.150736 9.062279 10.404354 9.027101 5.121173 9.325900 8.039559 4.000874 10.194136 6.359960 10.736177 9.911945 7.124955 13.637424 10.244673 10.657226 12.587229 10.148415 10.100283 1.062260 TCGA-B6-A0RN 60 0 NA 5261 breast stage ia t1c n0 (i-) m0 2-10-2014 female 1993 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 5 2 2 3 3 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.503025e-07 10.6711458 6.4322863 7.1401058 11.2552591 NA 10.1947869 -0.2819124 9.4535968 11.8450677 10.4620335 9.4969392 7.5572446 8.3600925 9.3627982 7.3400922 8.6809368 10.6992512 9.7975255 6.6487775 -0.2819124 10.1531900 9.8048404 9.4115277 11.7013906 9.5650981 10.1856462 4.1103549 10.6454483 -0.2819124 0.3029916 6.5945575 10.2263307 12.4983754 7.4357169 12.9421177 13.4340563 8.8842038 7.4561326 4.4729296 6.9516601 8.1189203 9.9635933 7.8291766 13.2771787 NA 9.8259115 14.5393164 6.6428532 9.6634845 10.5783517 6.9895035 6.6838256 NA 13.4443451 9.6301741 1.8879541 8.1856461 NA 3.0399631 9.5398147 10.1092843 10.2440508 11.9052381 10.0126614 9.2562297 NA 10.5857055 9.7327586 7.0263796 8.6006838 4.6249314 11.5219699 14.3001238 6.0866352 11.3432929 10.9967805 8.4544424 2.1774714 3.4184868 9.4219443 8.6736907 10.6132372 -1.2820878 5.3904648 7.2649351 9.2840946 11.1025547 10.7603841 4.6006860 3.4729296 10.4535967 12.1543618 NA 13.5576382 6.1017446 7.2878961 12.1751650 13.7635871 12.7683145 8.7881617 10.5674458 11.2540450 10.8490262 10.6395098 4.4459584 8.5334240 12.6007792 12.1774723 -0.2819124 10.0662156 8.9189392 -1.2820878 3.1137838 9.0733918 11.3191150 9.7500864 8.8715926 14.8630772 9.8753877 9.9414391 8.2416028 1.3029916 14.9297389 9.5221717 12.4859147 12.3306788 10.1210527 10.1443054 8.4712574 10.9299442 1.01660000 1.47230000 1.47230000 -0.00678130 -0.00678130 -0.00857660 -0.01059000 -0.01243800 -0.01243800 -0.00314320 -0.00314320 0.00055459 0.00631800 0.00631800 0.00476210 0.00476210 0.00476210 -0.00567570 -0.00567570 -0.00498440 -0.01058100 0.02006300 0.02946300 0.02946300 0.02946300 0.04160000 0.04160000 0.02606800 0.02890300 0.01754400 -0.01133500 -0.01316200 -0.00678130 -0.00857660 -0.01092200 -0.01059000 -0.01059000 -0.66726000 -0.01243800 -0.01243800 -0.00027724 0.00000000 -0.00314320 0.00339510 0.00339510 0.00339510 0.03270400 0.02034300 0.02034300 0.00476210 0.00476210 -0.00567570 -0.00567570 0.05124500 -0.00498440 -0.00344300 0.02006300 -0.84623000 0.02946300 0.02946300 0.01153900 0.04160000 0.03576200 0.02890300 -0.00228440 -0.81786000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.027 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.027 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4895301 13.5958520 8.7948564 9.7445641 3.3618947 10.9229174 1.7180437 NA 8.8265650 7.6309303 NA 8.7417949 2.3029916 10.2897933 8.8842038 0.7179999 7.8473236 9.4895301 10.4049789 10.3695409 9.7475281 6.9659678 9.9606194 1.3029916 9.8213285 9.2562297 0.3029916 NA 10.4417016 3.0399631 13.0511261 12.0990428 7.8626987 10.2973566 7.0799850 9.2138957 4.0034403 0.3029916 0.7179999 4.7624339 9.0887281 9.7848027 10.2278157 4.0034403 7.7337068 6.0930805 10.6476690 7.7569599 9.6406251 NA 10.2018564 2.7180437 3.8879639 10.2378194 7.0039518 4.7624339 9.5067590 6.0667695 7.2258350 NA 14.3226808 -0.2819124 9.8954602 NA 8.8068290 4.6006860 8.1774724 8.3798189 12.5759245 4.1443075 8.1836071 12.9421177 9.8696915 10.9618097 13.2771787 12.0149569 9.2036385 10.5374215 13.7817728 10.2376769 8.6736907 10.4365735 -0.2819124 7.3798185 10.9444529 11.246006 7.937209 9.012661 9.703171 6.937209 10.808881 5.225834 4.241604 11.701391 7.984827 6.525396 8.467910 3.707635 11.991691 10.058447 7.343750 8.582227 11.783625 4.672239 10.244051 10.533824 7.776032 8.558819 10.507982 9.296413 1.525417 8.964615 7.295470 5.287897 11.102555 7.689584 10.420646 10.453597 7.383377 14.686415 10.097419 10.756617 12.836333 10.811458 9.734849 1.887954 TCGA-B6-A0RO 71 0 NA 4929 breast stage iiib t4 n1a m0 2-10-2014 female 1993 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 72.63.0 5 3 1 2 3 2 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.668684e-07 12.0299193 5.5159206 7.3299954 11.7953873 -0.7415414 9.1811175 NA 9.4076451 10.8614638 7.9881535 9.0691047 7.0100771 8.1087199 8.3326744 8.3696689 9.4044651 10.1165140 10.8359619 6.1288976 -0.1564985 9.3440056 9.0234045 14.9573055 11.2950501 9.4545204 10.9909125 3.4679837 10.4287710 NA 6.0067266 6.2185351 10.7286835 11.9845382 5.9450341 13.2062613 13.6090234 9.4489751 3.8732423 NA 5.5159206 7.9380128 10.2090889 5.4969384 12.9942477 6.7261391 10.0850815 13.2870866 5.3774743 9.0379897 10.2368860 7.6270392 10.6357435 0.5804350 15.1793393 8.4495923 NA 6.8169542 -0.7415414 2.7179560 10.1627914 10.7847877 10.2243173 9.5668720 9.9252009 8.9424048 5.0658868 10.7715203 8.8481841 5.7742336 8.5872078 13.3461616 10.5545889 13.5132664 6.4270044 10.8996816 11.1618500 8.0134204 NA 1.7179560 7.2010476 8.6626100 11.0846842 NA 4.2585340 7.5393038 9.0505099 11.4206096 5.0658868 3.2127250 4.2585340 11.3241175 11.4708774 2.6508564 13.2816809 7.8509900 8.0217457 11.3083816 12.1834383 12.6311260 9.1188440 11.8364339 11.2392081 11.5621711 9.9437198 4.3878174 9.1616617 11.7454937 10.2933320 NA 9.6599460 8.1951709 -0.7415414 4.0661495 8.8321802 10.7862544 10.0699077 9.0324965 14.9999605 9.3903900 9.8727828 7.0100771 2.4284640 16.4061255 9.4365754 11.7047117 10.4047835 9.8458417 8.3993630 8.4643264 10.6155131 -0.4401700 0.4326000 0.3984800 0.0059700 -0.0008316 0.0550880 -0.0023553 0.2864200 -0.4418300 -0.0069195 -0.0069195 -0.0070576 0.4132900 0.4339500 -0.0079063 -0.0079063 -0.0063413 0.4334400 0.4334400 0.4198200 0.4339500 -0.0087146 -0.0059522 -0.0059522 -0.0059522 -0.4147600 -0.1208200 -0.0023883 0.4255300 0.0015778 -0.4401700 0.0000000 -0.4452300 0.0600790 0.0550880 -0.0023553 -0.0023553 -0.1840800 -0.4326800 -0.4738400 -0.0181890 -0.0033243 -0.9224900 -0.4448000 -0.4448000 -0.4483500 -0.4500700 0.4339500 0.4339500 -0.0094046 -0.4559700 0.4334400 0.4323000 0.4323000 0.4198200 0.4339500 -0.4516800 0.4621200 -0.0059522 -0.0059522 0.3921400 -0.4272400 -0.0023883 0.4349600 0.3880000 -0.4674900 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.320 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.320 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 6.8769184 11.5206279 5.7976926 9.5731162 0.5804350 10.3400164 0.5804350 -0.7415414 8.6721608 7.6270392 0.2585792 6.9415277 0.2585792 10.6554053 8.3499685 -0.7415414 6.5623142 9.8992299 8.5462455 11.9004719 10.4450373 7.1258123 9.2753414 2.1654296 8.5064607 8.9424048 5.2919571 -1.7413002 9.8131219 2.7179560 12.4680625 12.2982232 6.9059910 10.4174583 7.8169536 9.6905529 5.2010457 -1.7413002 -1.7413002 10.3303305 9.9095847 10.3874939 11.3987237 5.0787123 9.1698351 9.2662611 10.6766491 6.8805851 9.8434956 NA 11.1234929 1.4284640 2.9589726 10.3117327 5.7549463 NA 9.1134015 6.2300762 11.2572997 NA 13.2874751 -0.7415414 11.3881380 NA 8.3722752 3.3029331 8.8704800 10.8366698 12.435407 5.091425 8.795751 13.206261 10.147657 11.066693 12.994248 11.897308 8.920311 11.020707 13.383745 9.154865 8.662610 9.691597 1.717956 7.195171 13.818926 10.0472514 6.6721608 8.9397714 9.3293248 7.2528868 9.6608310 4.3878174 9.7712735 11.2950501 5.3565664 -0.1564985 3.1654296 8.0073463 9.1032388 8.9023893 9.0969491 8.3852373 12.0382524 2.7179560 10.2243173 10.7680606 10.5085353 8.7840537 9.7169396 9.0175890 NA 8.9183594 5.8279333 2.9589726 11.4206096 4.8878908 8.9005846 11.3241175 7.1892701 13.3132221 10.8766891 10.6089197 12.8688081 9.7332530 8.2127293 0.5804350 TCGA-B6-A0RP 73 1 3126 NA breast stage iiib t2 n1b m0 2-10-2014 female 1994 NA NA mixed histology (please specify) yes 2 white not hispanic or latino 72.63.0 5 5 3 2 2 1 1 4 3 3 NA NA 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 5.562279e-08 10.6098569 6.1011290 6.7101383 11.3616048 -1.7938569 10.3771761 0.2062681 9.6093241 11.7809057 11.4964750 9.5083799 7.8997992 9.1034014 8.5846070 8.3291402 9.2189366 10.8101703 9.6683032 7.0673989 1.7912723 10.4850520 9.7594615 12.8839217 9.1821602 9.6497737 10.4954665 5.9611996 10.4393326 -1.7938569 -0.2087277 8.0533693 12.4416533 12.4673052 7.8465573 13.2043736 13.0381637 10.1381577 7.4518647 4.3355976 7.6241645 8.4542397 9.5276766 7.5835228 13.5097362 -0.2087277 10.8866717 14.1532641 7.7723660 9.7221697 10.9235601 7.2397350 2.9611973 -1.7938569 14.2455262 11.6908834 2.7298790 7.5439343 -1.7938569 4.2286802 9.5671592 10.0200934 10.6618963 10.4297106 10.1935761 9.6891200 0.2062681 11.6854609 10.0935328 6.6981657 9.1162051 -0.7936068 10.6254823 14.5856228 7.5156297 12.1729077 11.4204795 8.3187516 1.2063306 0.7912723 8.5214619 9.2670081 11.6477002 -0.2087277 7.3407385 7.4399323 8.8609482 11.3721613 5.9942154 6.5813512 4.9744972 10.0843630 11.5848780 1.6657566 13.7448952 6.2615947 7.4870827 11.4802534 13.7125577 12.9568621 8.3420213 10.3933548 10.7790124 10.7415681 10.9580654 4.9205553 8.0642933 11.9488321 9.8980556 NA 10.3359172 9.4114945 -0.2087277 3.4568981 9.9274113 10.9361453 9.4381333 9.2541178 14.7671226 10.2527541 10.0908643 9.2904562 2.9067559 16.0573291 9.4911362 12.8567469 13.0096865 10.0304754 9.7401285 8.7269310 10.8707972 0.5068900 0.9721100 1.0375000 0.3524700 0.3409900 0.0000000 -0.3628300 -0.0038779 -0.0115830 0.3775900 0.3775900 0.3502300 0.0136320 0.0136320 -0.0063668 -0.0161470 -0.0161470 -0.3524800 -0.3524800 -0.7265000 0.0118410 -0.3376800 0.0150280 0.0150280 0.0175440 0.0104240 0.0104240 0.0104240 0.0370760 -0.3424000 -0.3508800 0.0227250 0.3592000 0.0000000 0.0000000 -0.3628300 -0.3628300 -0.0038779 -0.0014621 0.0237660 0.0056955 0.0018902 0.3775900 -0.3526600 -0.3493900 -0.3493900 -0.3493900 0.0136320 0.0136320 -0.0063668 -0.0161470 -0.3524800 -0.3535300 -0.3535300 -0.7265000 0.0118410 -0.3376800 -0.7173700 0.0150280 0.0150280 -0.3441200 -0.0044312 0.0104240 0.0370760 -0.3390600 -0.3262300 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.029 -0.717 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.342 0.630 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.029 -0.717 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.342 0.630 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 9.0774473 13.9697839 3.6325823 9.6575234 2.9067559 10.7813786 1.3762348 -1.7938569 8.3924265 8.8347577 NA 7.8156939 3.2063150 9.8265320 9.5627641 1.0136409 7.8465573 9.4285034 12.2219885 10.0685621 9.7509047 7.6492555 10.9798635 3.6657452 10.4227549 9.6891200 1.7912723 NA 10.7761677 3.0136588 12.9027907 11.8307649 8.0439399 10.5397471 8.7532067 9.2154410 3.6657452 0.7912723 NA 3.5282462 8.6554610 9.4035289 11.0116530 3.6657452 7.5939849 6.3661841 10.6419824 7.1517563 9.5808084 NA 13.3451439 4.9744972 5.9342334 9.9579902 5.9387163 4.3355976 8.7968991 8.2924482 5.6657424 -1.7938569 13.2774393 0.2062681 10.0545438 NA 9.0392023 4.9477784 7.6093243 8.5769997 12.5608253 3.6981629 8.8329337 13.2043736 9.5648590 10.7136113 13.5097362 12.1480934 9.0510180 10.8438427 13.6501946 10.4166791 9.2670081 9.1266650 0.7912723 7.8663078 11.2772716 11.0822534 6.8645242 9.1561390 8.9435595 7.8136427 9.8774463 7.4327239 7.9188394 9.1821602 6.9444040 5.7454713 4.9477784 6.0373668 10.3827970 10.2598987 8.2602379 8.0055937 12.5269717 5.5282400 10.6618963 10.5419816 11.4327244 9.5174928 10.4019920 9.2252077 0.5282712 9.2034917 6.8437339 6.0007279 11.3721613 10.0980959 10.2485290 10.0843630 7.3661832 13.1433181 9.6986661 10.6045214 13.2753843 10.4121054 9.6688144 1.2063306 TCGA-B6-A0RQ 68 1 4273 NA breast stage iib t3 n0 (i-) m0 2-10-2014 female 1994 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 85.58.0 2 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 8.343418e-08 11.2257854 6.3084137 6.8319748 11.2056916 1.6303589 10.1979173 NA 9.5880239 11.5277332 8.0930483 9.6359660 7.4908076 9.4651284 9.9549721 7.1756923 8.9386804 10.3731561 9.6980446 8.4090756 NA 11.0149094 11.1883794 13.6141189 10.7175391 9.9400452 10.9416356 3.3528009 10.5754926 -0.1065601 3.0632958 7.3055930 14.0292989 13.0686655 7.6438035 13.0996780 12.7617483 11.0446039 7.4883222 5.1413020 7.7199240 9.5722693 10.4820905 9.6741889 12.3078849 5.3745040 11.0811403 12.6246949 7.8102503 9.8647708 10.6888744 8.2001968 5.7262672 NA 13.4074081 7.7367733 1.8933622 8.4389839 NA 3.1663941 9.6785558 9.7811043 10.1546872 11.2124834 9.8961909 10.3898968 2.3958854 11.2443150 10.0922302 6.3363191 7.1787784 9.3711341 11.2930098 14.8975817 7.8483669 11.5373823 11.1710507 7.6235626 2.4783506 4.2153058 8.5324152 8.9486584 13.3973672 -0.6915226 3.4376938 7.5891845 9.5056300 11.2956773 9.4575253 6.3140385 3.3528009 10.1979173 11.9598014 2.8319786 13.3662359 5.8475710 7.2828280 12.8126116 12.4085007 12.8322203 8.0566063 10.9205908 11.1181815 10.9387328 11.4610151 4.5178678 8.1076952 11.2898023 11.4446035 NA 10.4399489 8.9887730 3.1663941 4.1415554 10.0149094 10.9251919 10.3565596 9.0799029 15.0001841 10.1377397 9.3013517 8.7472051 5.0226608 15.5752914 10.1257968 13.1778144 12.5532975 10.0295125 10.0118844 8.0832006 10.0058154 0.09647000 0.09647000 0.31033000 0.00000000 -0.00228020 0.00555290 0.00235810 -0.07000100 -0.07000100 0.00235810 0.00235810 0.00235810 0.00055459 -0.00124730 0.00041593 0.00041593 0.00041593 0.00246870 0.00246870 -0.15080000 -0.09683600 -0.00221680 -0.04183800 -0.04183800 -0.04183800 -0.00572660 -0.00180140 -0.00693280 -0.00498440 0.09647000 0.09647000 -0.00235530 0.00055459 0.00555290 0.00555290 0.00235810 0.00235810 -0.07000100 -0.07000100 -0.03354100 0.00171690 0.00277450 0.00235810 0.00124810 -0.00165720 -0.00165720 -0.00165720 -0.00124730 -0.00124730 -0.00318590 0.00041593 0.00246870 -0.00180140 -0.00180140 -0.15080000 -0.09683600 -0.00221680 -0.15592000 -0.04183800 -0.04183800 0.00166420 -0.00572660 -0.00693280 -0.00498440 0.00305220 -0.00719580 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.7922294 11.7873093 7.1221944 10.2846194 3.6303472 11.6275209 -0.1065601 3.2626136 8.8990004 9.6659653 1.3084191 7.6053299 4.6659669 9.5300005 9.1173777 2.0088454 8.6493762 9.9643913 10.6554810 10.4080899 9.4907767 8.0749421 10.7624555 2.3084191 10.0452380 10.3898968 5.8630018 NA 10.4208529 6.0498812 13.7678450 12.1805110 7.6637644 10.7554966 8.0897730 9.0183588 6.2856926 0.8933622 1.8933622 1.1157657 8.9203603 9.8461172 9.2885528 7.2970979 9.0018656 6.7841467 10.3514406 5.7092934 9.9198993 1.7678243 12.1139557 2.0088454 4.9949146 9.7833461 6.0661043 3.6659612 8.7304783 7.1381356 6.4733210 -0.6915226 14.5789277 0.3083609 10.9527203 NA 8.1044530 6.2032305 7.7304783 8.3677576 12.4342369 3.5938199 8.5444274 13.0996780 10.2917633 10.4660761 12.3078849 12.4387426 9.2792382 10.5716826 12.8543431 11.0378217 8.9486584 8.1413035 -0.6915226 7.6942757 10.4389839 10.9617063 6.8591595 9.0045115 9.0658033 7.3196405 10.0558805 5.4982381 6.6121947 10.7175391 5.5752004 6.0498812 9.5833739 4.4901144 11.9647265 10.2523933 8.4143220 9.1003901 11.2885529 4.7346771 10.1546872 10.4527529 11.7646394 10.5527772 10.5444275 9.3370101 1.1157657 9.4366333 6.2153039 6.0226585 11.2956773 3.9808388 11.0930482 10.1979173 6.9949134 14.8822824 10.0979470 10.6334377 12.9369728 10.4622820 9.7140866 -0.6915226 TCGA-B6-A0RS 38 1 3063 NA breast stage iia t2 n0 (i-) m0 2-10-2014 female 1988 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 72.63.0 6 3 4 1 NA NA 2 6 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.32280303 5.53609954 6.76269297 12.19119866 -1.66337383 9.30581415 NA 9.23578449 10.86219317 7.95664739 9.50447302 7.56524605 9.05238954 9.99106374 5.97305328 9.23955629 10.31799500 9.58198029 7.81822681 4.29062345 9.91149416 12.04313952 13.17646792 11.07134893 9.63449017 10.14378255 6.43445976 10.59852256 -0.66360234 2.42390083 8.41056922 11.72968404 12.92045061 7.14378216 14.14468801 11.76962188 10.17602513 6.09131478 3.24331872 7.73089057 7.96030898 12.77586900 7.43709038 12.71357041 4.19441017 12.91119857 12.22002556 10.13732753 9.33532134 10.87267488 7.64248931 5.64931079 1.33645479 13.99278577 10.45341160 3.79586044 9.05410421 7.48617455 4.62182917 10.11860683 10.62903690 9.18739587 10.44004327 10.39475774 9.99016851 -0.07856367 10.70929270 10.59852256 3.89102054 8.24781978 6.44495192 8.40923011 15.15560884 5.60891862 10.39408096 10.46506648 10.15221118 2.33642622 NA 7.58198010 9.64647231 10.27048701 NA 4.69397753 7.10461238 10.51944264 10.50822996 6.16297534 6.62644644 6.03686814 10.42322739 11.62356284 2.14378522 13.40893715 4.00885436 6.89484807 11.56344188 15.16664550 13.00863199 7.92326746 11.23124543 10.39746126 9.64957145 10.27416928 3.69397753 8.32511248 12.64973589 9.45016973 -1.66337383 10.13043736 9.06604828 2.03685495 2.34093251 9.62009480 10.93517809 10.33853941 9.07282959 15.68004715 10.03600007 10.06264576 6.79995246 3.19440229 14.07351653 9.87073059 14.78596325 12.47301833 9.80606945 9.39171016 7.81418573 10.30885822 -0.1917000 1.0076000 0.5912200 0.3209600 0.6950800 0.5154700 -0.0166640 0.7984500 0.1434400 -0.0021763 -0.0021763 0.5470500 0.5350800 0.5368300 0.1742700 0.1483700 0.1865100 0.2236500 -0.0631270 0.5121600 0.5475800 -0.1669700 0.1646400 0.1424000 0.1626900 -0.2228300 0.1931900 0.2473600 -0.1493500 -0.5326300 -0.1918300 -0.3606400 -0.5414600 -0.5662900 -0.3913700 -0.5712700 -0.5637300 0.7984500 -0.0132240 -1.2929000 -0.1893200 -0.5865400 -0.7342200 1.4016000 0.7761900 -0.6433700 0.5562500 -0.1521200 0.4994800 -0.3485500 -0.4966000 0.0923570 -0.0541110 -0.0390820 0.1489500 0.1857500 -0.5192500 -0.5536400 -0.5553400 0.1424000 -0.6114000 -0.2228300 0.8895200 -0.2592300 -0.1920800 -0.5427500 -0.152 -0.152 0.174 0.174 0.000 0.000 0.149 0.186 -0.224 0.211 0.211 -0.555 -0.413 -0.552 -0.552 0.000 0.193 -0.192 0.550 -0.259 -0.149 -0.158 0.197 0.000 0.000 0.159 0.159 -0.533 0.000 0.000 -0.549 0.000 0.000 -0.025 -0.025 -0.279 -0.137 0.776 0.607 0.000 -0.152 -0.152 0.174 0.174 0.000 0.000 0.149 0.186 -0.224 0.211 0.211 -0.555 -0.413 -0.552 -0.552 0.000 0.193 -0.192 0.550 -0.259 -0.149 -0.158 0.197 0.000 0.000 0.159 0.159 -0.533 0.000 0.000 -0.549 0.000 0.000 -0.025 -0.025 -0.279 -0.137 0.776 0.607 0.000 8.2789424 13.5292984 9.7798892 8.4644220 3.2433187 10.3967859 0.6583715 2.2433035 8.8292822 9.1453919 -1.6633738 8.5859559 9.0255521 11.2627237 8.9694228 3.6939775 8.3615670 9.0778945 11.6334872 10.3974613 8.8699522 6.7668800 11.3129918 2.4239008 5.9213911 9.9901685 2.9213982 NA 10.9010535 -0.6636023 13.8209044 12.2270719 7.1597947 9.7715770 8.5088553 11.2798582 2.9213982 1.6583715 NA 1.1437852 9.0677468 9.7341023 11.6514357 3.1437852 8.4436576 9.2656861 10.1621815 6.7458182 10.0377342 -1.6633738 11.2465082 2.3364262 3.6583600 9.8357703 5.2931829 6.2789419 8.7005625 8.1787779 7.5336443 6.1243302 14.0091569 -1.6633738 10.1653575 2.4239008 9.7054796 3.5063480 7.8162080 9.0437869 13.799576 7.074520 9.332901 14.144688 10.375689 11.454233 12.713570 7.989272 9.348151 10.568249 13.810007 12.124840 9.646472 9.259012 3.091311 7.637924 11.062007 11.762823 6.117786 9.409230 9.642489 7.861949 10.628821 6.745818 4.603217 11.071349 7.760594 NA 6.001764 7.495921 9.469570 10.868784 6.347655 8.654970 8.005312 6.402518 9.187396 9.954813 7.709293 10.101299 10.946068 8.755334 3.762689 9.123212 8.277490 7.084620 10.508230 5.994639 11.292292 10.423227 7.040781 14.347742 10.116967 11.130437 12.716144 10.815703 9.913857 1.143785 TCGA-B6-A0RT 39 0 NA 2721 breast stage iiia t3 n1 m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 72.63.0 4 4 2 5 3 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 2.781139e-08 11.41515306 7.36073123 6.56102975 11.77546337 -0.06839258 10.71603532 -0.65335508 9.39451629 11.96211037 10.36525860 9.03145916 8.28187579 8.57071224 9.84954240 6.90513184 9.71957569 10.23164433 10.61992347 8.85351417 5.32398968 11.49534610 10.95103222 12.63420660 10.98605135 10.39689939 10.75875113 10.11241110 10.73311203 5.20469242 2.59464409 9.98876236 11.48738068 13.00085714 7.24757724 11.62414335 10.43085467 10.36421500 5.86241172 2.99057372 7.30671246 9.21089680 8.74010117 8.05923737 5.59463812 -0.06839258 12.02079254 10.82472180 7.72608870 9.48089943 10.76377199 7.72825387 5.42352775 -0.06839258 15.01869985 11.34441054 3.47599277 10.11861267 0.66866378 6.17325938 10.32970419 10.31969041 9.35583933 10.80895726 9.97788765 10.21437547 7.79792151 11.62950949 10.94615864 6.35793726 8.00313558 3.39110780 8.34811864 14.73504752 9.10323351 11.12663511 10.11323961 12.04498122 1.51662035 NA 8.89649528 9.50532032 11.12807032 -0.06839258 2.34670165 7.36630123 11.25604123 10.85227411 5.80614100 9.25134535 5.97606801 9.74117336 12.22753770 1.15406467 13.17801789 4.59463812 7.36907819 11.08353531 12.43284687 12.84549752 6.37461699 9.46953865 10.83052638 10.64477607 11.35040420 5.17960261 7.90704327 12.03703605 9.23393119 0.34675837 10.40841934 9.85599079 3.04715446 4.15483431 10.36525860 11.67594636 10.35688900 9.63442301 14.75656560 11.43731930 10.33823252 7.56587892 3.55615961 13.04378679 7.72392096 12.79579478 12.39025063 9.71957569 9.77559415 8.09322475 10.95184522 0.0216420 0.4819900 0.2639900 -0.0112160 -0.0112160 -0.0472960 -0.0136770 0.0265140 0.0265140 0.0759910 0.0759910 0.3738000 0.1584600 0.0037465 -0.0102320 -0.0102320 -0.0102320 -0.0182160 -0.0785440 -0.0483420 0.0223040 -0.0490190 -0.0948540 -0.0019399 -0.0019399 0.0118370 0.0568020 0.0793030 0.0018030 0.0933960 0.0216420 0.0000000 -0.0112160 -0.0357210 -0.0472960 -0.0136770 -0.0136770 0.0265140 0.0265140 0.0265140 0.0594690 0.0594690 0.0167960 0.0387710 0.0387710 0.0387710 0.0387710 0.0037465 -0.1003000 -0.0102320 -0.0102320 -0.0511320 -0.0785440 -0.0924130 -0.0483420 0.0223040 -0.0829990 -0.0475310 -0.1048100 -0.0019399 0.1346800 0.0118370 0.0969610 0.0018030 0.0213230 -0.0253460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.5943415 11.8640109 2.4341612 9.0746312 6.9058202 11.1732591 7.5315858 5.9977621 8.9760671 8.4630547 3.8702759 7.5755294 4.6865622 10.4255285 9.8702725 2.6686411 10.7187595 8.8633955 8.4977273 10.0436782 9.3584760 7.7130331 9.8564856 3.8702759 7.6064541 10.2143755 4.2536036 NA 11.4467158 2.1540647 13.1713214 12.0109357 7.6436268 9.7379542 11.5054781 10.2335503 5.2892258 2.6686411 0.3467584 2.2535960 8.9410353 9.5845182 7.3992788 5.8936049 9.2103316 7.1827608 10.0371452 3.9905646 10.0716507 3.4341745 11.7096133 5.0471501 4.1540647 9.5785557 5.6898526 9.2972666 10.3132161 9.8051172 10.4358300 5.2774492 13.3575010 2.9316641 10.5521985 NA 9.8805270 4.3911078 8.4047022 7.8405658 10.1830964 8.6413314 8.6111532 11.6241434 10.7891358 11.0497491 5.5946381 10.5094167 9.0923851 10.9231949 13.9517560 11.9035759 9.5053203 7.3382327 0.9316831 8.1065991 11.5287946 10.622544 3.668641 9.090703 8.580330 7.385629 9.976254 10.345301 8.504057 10.986051 10.805886 3.434174 7.840566 9.068220 11.617298 12.112515 8.296537 8.378757 10.004476 10.433510 9.355839 10.913954 10.859698 11.302179 10.426529 8.907999 NA 10.263766 8.405555 10.178809 10.852274 5.641332 10.953116 9.741173 8.488971 13.834205 10.209348 10.661860 12.432266 11.169879 9.277448 5.575530 TCGA-B6-A0RU 49 0 NA 3991 breast stage ia t1c n0 (i-) m0 2-10-2014 female 1998 NA NA other specify yes 0 white not hispanic or latino 72.63.0 4 4 4 1 1 3 2 5 2 6 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 7.509076e-07 1.668684e-07 12.3728384 8.4651754 6.1562247 11.4828112 NA 9.7690295 NA 10.0253011 11.1778198 5.7812968 8.9960243 7.5604559 8.5372192 9.6395999 7.7387935 8.7882619 9.6523784 10.5044689 8.2466404 4.3125272 8.9717599 11.0129682 13.2964891 10.4299860 10.0099925 10.9869730 4.7339942 10.7079096 5.2330943 1.5051796 8.3237556 12.4196521 12.2887857 6.9522567 11.7556200 11.4135662 11.0774000 5.6344568 1.9646204 8.2364926 8.9209152 11.3481131 8.4666230 8.4695144 NA 12.1833335 10.2271271 7.4622757 9.2791370 10.5079885 9.0433626 6.4120634 4.1490317 14.4656855 10.6546031 2.8271077 7.2262725 1.0901082 4.5275396 9.6260594 9.6038637 9.2364926 10.0341160 9.3961978 10.1859726 6.2733574 11.0174202 10.1942979 4.1198873 5.7905766 7.0938887 8.0863740 15.0819531 7.6317235 10.8242811 10.7728381 8.6675647 0.5051796 1.8270873 8.2313916 9.1152757 12.6597543 NA 3.5926364 6.7097442 11.6304255 10.1789242 7.5712627 5.3999914 3.8627291 9.3004015 12.3472292 0.5051796 13.9846065 4.4120634 6.6032050 11.2861233 12.1784826 12.6569829 6.4240369 10.8006555 10.6146777 10.7224133 10.9504471 4.8450233 8.3380633 12.6065748 10.5823230 -1.4949221 10.1651694 9.8599739 1.0901082 5.6105583 10.3689726 9.3623770 10.3197560 10.1087999 14.6280015 9.7321878 10.3820741 6.4709582 5.0287371 12.9783719 9.0826023 12.8936618 12.3210571 10.7542870 9.9166846 8.4225454 9.5648223 0.154230 0.154230 0.818780 0.155570 0.155570 -0.362270 -0.322660 0.136980 -0.350900 -0.393220 0.231590 1.645400 -0.261710 -0.373230 0.055902 -0.394230 -0.394230 -0.356320 -0.342770 0.228500 0.177350 -0.281710 -0.341280 -0.341280 -0.341280 0.113990 0.113990 0.549780 0.172070 -0.425520 0.154230 -0.319750 0.155570 -0.362270 0.146630 -0.322660 -0.238420 0.136980 -0.350900 -0.333440 0.061039 0.000000 -0.393220 0.144390 0.144390 -0.412040 -0.025729 -0.725200 -0.367400 -0.400780 -0.298790 -0.356320 -0.354760 -0.422680 -0.360710 0.177350 -0.281710 0.013842 -0.341280 -0.341280 0.605880 -0.406420 0.113990 0.125900 0.202240 0.263680 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 0.000 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 0.000 7.65237822 12.58823727 5.61369666 10.07834738 2.31251997 12.07716314 -0.49492209 5.53859714 8.87695030 10.94006233 2.67509327 8.00899942 7.65492096 10.21339528 9.32615013 2.20561147 9.14812775 11.58399150 8.98798163 9.32055688 9.21126364 8.30121312 12.05062070 -1.49492209 9.52198177 10.18597256 5.24663990 NA 10.40453042 3.71463019 12.94837610 12.36402875 7.98090672 10.17405856 7.69746665 9.94396541 4.20561147 2.41207694 NA 0.09017595 8.25671773 8.12539332 7.42701443 6.31252904 8.15261391 6.89319109 9.74834751 7.44475236 10.53480584 -0.49492209 14.00803641 3.20561147 5.23309427 9.87581738 7.65684956 3.89749215 9.23734096 7.61630917 5.58198989 3.99703040 13.48070807 0.50517957 10.63477857 0.82708733 8.35692245 6.57126269 8.21425743 8.38475699 10.792886 8.539973 7.579315 11.755620 10.243680 11.880213 8.469514 10.409055 8.863286 10.616841 12.551786 11.752063 9.115276 9.031673 1.827087 7.831603 10.633490 11.223920 4.435909 9.024810 8.932486 8.872588 10.225127 4.771960 6.709744 10.429986 10.441443 5.581990 8.744772 9.383408 14.577160 10.248325 9.084357 8.934580 10.015938 6.059762 9.236493 10.612718 10.890227 11.852656 10.993014 9.174944 5.286534 9.234284 7.340560 4.948115 10.178924 8.552298 10.440394 9.300402 7.941885 14.738306 10.011481 10.674472 12.219634 10.270874 9.567220 2.412077 TCGA-B6-A0RV 42 0 NA 4788 breast stage iiia t3 n2 m0 2-10-2014 female 1996 NA NA mixed histology (please specify) yes 5 white not hispanic or latino 72.63.0 2 2 2 4 3 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 3.893595e-07 10.7890077 7.1572651 7.4412038 11.5227476 1.2746493 10.3420568 2.1490967 9.6047923 11.7019352 8.3425050 9.3585448 8.4209788 9.6482127 9.3262845 6.3117120 9.0830503 10.3425049 9.4865107 7.1159249 3.7340592 10.3153687 9.2557139 10.5776420 11.4250044 9.6705136 10.3861928 6.2365538 10.1460041 1.2746493 0.2746493 7.9494030 11.9094334 12.8727524 6.1572661 12.2355896 13.4152392 10.0792912 6.4775624 4.4445478 6.0819765 8.3062089 9.4962095 6.3043705 13.2947342 3.5965536 10.4407855 13.5403351 5.8595845 9.1198093 11.2440089 7.0603468 5.7876910 0.2746493 13.9618767 9.2384819 2.6896570 8.6467621 NA 4.3335168 9.4627992 9.8092495 9.3638522 12.3222007 9.8570781 9.7462976 6.2595154 11.3312601 9.9917276 6.8034014 7.2210409 12.1712071 12.0115880 14.1916836 8.0190302 10.9707205 10.5324031 8.8189429 0.2746493 3.9375892 7.7530549 8.9399582 11.2967590 NA 2.5965536 7.2821173 10.2297880 11.1274120 5.0646975 5.4445478 4.6203987 10.6181783 12.0111653 2.1490967 13.5383806 5.9088273 7.7092507 12.3302438 11.4430856 12.7892542 7.4175800 10.4412040 11.0115880 10.6446777 11.1051376 4.7557475 8.8292112 12.4623868 11.7792759 NA 10.0974587 9.4124674 0.6896570 3.0826685 9.8336807 10.7893365 10.3656169 9.1201124 14.5204969 9.5522973 10.2651992 8.1449870 3.2132228 16.7336857 10.6006773 12.7297783 11.7237710 9.9476369 9.2988386 7.9865759 9.9969859 0.01865300 0.01865300 0.01865300 -0.00194990 -0.01368700 -0.02261600 0.00697050 0.01133900 -0.01722600 3.14580000 0.50671000 0.48870000 0.00498690 0.01365700 0.00817140 0.53238000 0.01921300 -0.47333000 0.00012864 -0.00347270 0.00693350 0.03035500 -0.39631000 -0.44200000 2.69780000 0.04442200 0.04442200 0.04569700 0.03325700 0.06221200 0.01865300 0.04343000 -0.00194990 -0.02261600 -0.02261600 -0.02298700 -0.01505100 0.02229400 -0.01379100 -0.01722600 0.58864000 0.44297000 -0.50516000 0.00000000 0.00000000 0.00000000 0.02622300 0.01365700 0.01365700 0.00817140 -0.48733000 -0.47333000 -0.00610040 -0.46749000 -0.01396300 0.00693350 0.01160700 -0.52693000 -0.45641000 -0.44200000 0.01041400 0.04442200 -0.39219000 0.04683200 0.00595990 0.06937200 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 9.1011707 12.4187495 8.6525560 9.0636124 4.1888677 10.6747902 3.0819702 1.2746493 9.3505472 8.1388083 NA 7.5710495 1.2746493 10.0690382 8.9979988 0.2746493 8.9831316 9.4937908 11.3507699 9.3126268 9.4335097 7.7285790 10.0884036 2.0116030 9.7217055 9.7462976 5.0295103 NA 10.1959675 3.6896570 12.6319911 12.3018373 7.9232793 10.4734766 9.7175659 9.4361741 4.9934389 -1.3104325 -1.3104325 2.2746195 8.8073031 9.7604517 10.4026167 6.5034410 7.6075093 7.5257103 10.9036754 7.1201124 9.1895058 -1.3104325 10.5768805 4.5225517 7.0472123 10.0568344 6.7417932 5.8189426 9.3407116 8.5272878 9.3407116 NA 13.8475199 1.4970247 10.0798289 NA 8.6365663 6.1734753 7.7340538 8.1180202 13.694946 5.734054 8.224935 12.235590 10.064156 9.858959 13.294734 12.624549 9.135709 10.124809 12.581823 10.521363 8.939958 8.219091 0.689657 8.907617 11.221285 10.721361 6.296990 9.120112 8.462799 7.678344 10.776108 7.073364 8.329905 11.425004 6.431126 3.497012 8.167418 7.200424 11.638392 10.148066 7.528864 9.104345 11.577452 6.869569 9.363852 10.492984 10.981118 9.610013 10.438691 8.879484 NA 9.007638 7.457845 6.829212 11.127412 6.808601 10.503441 10.618178 7.285850 14.388066 10.314455 10.026724 12.143959 11.161843 9.401327 1.689657 TCGA-B6-A0WS 58 1 2965 NA breast stage x t1c nx mx 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 85.58.0 7 2 2 NA NA NA 1 3 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.503025e-07 11.17754673 6.82521322 7.94838125 11.48846495 -1.54540294 11.74483270 -0.54540294 9.97416202 11.58734680 10.41053891 10.00815504 8.04136566 9.01581366 9.98785547 5.30001753 8.81427547 10.57476371 9.69531704 7.19599320 4.06923815 9.91293244 9.99900724 13.77126693 11.07382873 9.12252441 10.38526309 7.82084781 10.49857829 0.45449178 1.45454442 8.81756538 10.86868244 12.28196775 7.84254332 12.17412852 13.70297227 9.86709569 5.62445187 3.66398213 6.57864743 8.25865695 11.27669823 7.93632522 12.29402485 1.45454442 10.07107469 13.97995484 6.00141945 9.29244542 10.50369368 6.94236554 7.03572617 -0.54540294 15.15867557 9.54725644 1.62442848 9.73819294 NA 4.72131250 9.95387341 10.99295724 9.23013599 10.22312373 10.03006497 9.90419038 2.70245808 11.44090119 10.09250914 7.64681861 7.42894048 1.45454442 11.66016632 14.93147762 7.64610360 11.17177377 11.20460464 9.60427282 1.77644093 0.03941918 8.00334756 9.55781366 11.28127290 -0.54540294 5.74914538 7.48243206 10.71867517 10.96355851 5.37339069 6.78991570 5.12695221 9.71544538 11.40890389 1.45454442 13.28305900 5.87237815 7.25865648 12.35133120 12.95038082 12.87842955 7.08388243 10.43180575 11.63163385 11.32393841 10.99392700 4.26188430 8.37785342 11.87330080 11.50079717 0.45449178 10.59439683 9.33257659 1.45454442 2.45633306 9.69769981 10.65327772 9.79437574 9.32950710 15.26362818 10.27590124 10.60617662 8.24405933 2.15497199 15.53176921 7.12341065 12.26389198 11.77701731 9.56500913 9.22105465 7.60934424 9.76616065 0.00805670 0.00805670 -0.00015220 -0.51455000 0.47632000 -0.00239860 0.00229720 -0.04759300 -0.10900000 1.39120000 3.65690000 0.48544000 0.00083195 0.00287510 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 -0.51290000 -0.46440000 0.00263570 0.43513000 0.00083195 0.00083195 -0.00207840 -0.00207840 -0.00207840 -0.00180140 -0.00078561 0.00805670 -0.00401620 -0.51455000 -0.00744020 0.02076300 0.00499690 0.00499690 -0.03823600 -0.10900000 -0.11196000 0.00958830 0.00000000 -0.52102000 0.00388540 0.00388540 0.00113860 0.00113860 0.00374650 0.00374650 0.00000000 -0.51239000 0.00000000 -0.00235530 -0.00235530 -0.47997000 -0.46440000 0.00263570 -0.41003000 -0.51197000 0.00083195 0.61879000 -0.00207840 -0.00207840 -0.00180140 0.00444110 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 10.0196278 13.3789208 5.8032529 9.7691090 5.1321738 10.7012664 2.9780858 NA 8.3808216 8.1073709 -1.5454029 7.6881454 4.8639186 10.5409938 9.1064745 -0.5454029 9.1858447 9.4615531 12.0274628 9.6947209 9.4274769 7.6344350 10.3670410 2.9139521 8.6736942 9.9041904 3.2618768 NA 10.4181444 3.1549720 12.3027575 12.1893412 8.1375204 10.1087143 10.0609310 9.2350655 4.4087254 1.9139521 NA 5.4879493 8.9662785 9.4845031 10.5406620 4.1269481 5.3493440 6.9423655 10.1060261 8.1858447 9.6250768 -1.5454029 10.9608333 3.8120772 4.2618843 9.9586942 5.9047466 6.5152220 10.0906972 8.0014200 9.2069064 0.7764409 13.3275853 0.7764409 10.4360931 NA 8.5953556 5.0692339 7.9077962 8.0710746 14.057254 6.141026 8.802147 12.174129 9.690540 10.254212 12.294025 12.120750 9.108266 11.041366 12.755307 10.734136 9.557814 8.282662 3.312505 7.309394 11.806431 11.201880 7.306275 9.271509 8.832821 9.299232 10.202815 7.591517 9.492759 11.073829 6.420311 3.498915 8.144524 7.681300 10.652050 10.462254 7.928232 8.727156 12.579939 8.012946 9.230136 10.302366 11.330083 9.934811 10.625390 8.884978 4.583808 9.080855 7.570870 7.960337 10.963559 7.352371 10.943315 9.715445 7.080234 13.238752 10.225603 9.776454 13.779023 10.605225 9.744545 2.846834 TCGA-B6-A0WT 61 0 NA 5739 breast stage iib t2 n1 m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 3 1 2 2 NA NA 1 1 3 5 NA NA 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 1.112456e-07 11.3640244 2.7732579 7.9358875 10.8334720 NA 10.6547985 0.3138263 10.4862632 12.1849709 10.5438561 9.9404573 7.6669824 8.8684244 8.6312484 7.9468308 9.1211905 10.5486531 9.9322212 7.0417566 0.3138263 10.5122807 9.5011877 14.3082333 10.5800365 9.2371631 10.9742773 5.0687224 9.9128187 -0.6861737 -0.6861737 8.1308192 12.1201839 12.6532682 6.8684250 12.5219176 12.9169984 9.1780219 5.8987985 3.3138408 6.1082505 8.6153317 8.0720586 8.4301795 13.0527724 3.4837642 9.4171234 13.3905678 5.2680338 9.3208630 11.0653797 7.4431184 7.7895689 1.8987888 14.2624137 10.6586864 3.4837642 8.2534150 NA 4.7732685 10.2071372 10.5617632 11.2781765 11.8034328 10.4943665 9.7885555 5.3138372 11.8612122 10.0485453 8.0951955 8.5378373 13.2274731 11.4272523 14.8668349 9.6893638 12.0584593 11.2654847 9.1211905 NA 5.2207246 8.0886229 9.1033694 11.6867007 NA 5.7400991 7.0003358 9.9522715 11.0724753 10.2592795 5.8836917 4.4431159 10.9067598 12.1575605 5.1964772 13.6604879 5.3799259 7.8684244 12.2224159 12.9370313 13.2167760 7.6221748 10.5647262 11.2460504 10.9707789 11.2282208 5.8684250 8.4223600 11.9760590 12.5498499 -0.6861737 10.1316188 9.1872798 1.6357544 2.9012048 10.2460504 10.8171645 10.1941845 9.7147152 14.8949480 10.2694856 10.0142754 9.1276168 3.0142839 15.8909547 9.9202409 12.9673526 10.5729904 10.5771048 9.6867008 8.8255882 10.5343047 -0.00401620 0.61970000 0.61970000 -0.00871460 -0.00871460 0.00083195 0.60828000 0.63280000 0.00332990 3.65690000 1.58510000 0.00638710 -0.67564000 -0.00733390 3.65690000 -0.01326400 -0.01326400 0.00180300 0.00180300 0.08710000 -0.00110870 0.58955000 -0.01780300 -0.01780300 -0.01780300 -0.04251700 -0.04251700 -0.05899000 -0.01574100 -0.00401620 -0.00401620 0.00124810 -0.00871460 0.00083195 0.00083195 0.00569190 0.00569190 0.63280000 0.00332990 -0.66883000 0.00000000 0.00000000 -0.66989000 -0.00691950 -0.00691950 -0.00691950 -0.00691950 -0.65594000 -0.00719580 -0.00713090 -0.65640000 0.00180300 0.00180300 0.00180300 -0.00110870 -0.00110870 -0.01064600 -0.15694000 -0.01780300 -0.01780300 -0.00526100 -0.04251700 -0.04251700 -0.67756000 -0.01257600 -0.02767100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 8.8096906 13.5873399 9.0211949 9.9267041 4.1568173 11.0502376 -0.6861737 0.8987888 8.2853791 9.1260129 NA 7.7200835 2.3138263 10.2903998 9.0984706 3.5617660 7.1593254 9.6942968 8.8056887 9.7337958 10.1200550 8.4584940 10.3438130 1.6357544 9.9468308 9.7885555 1.8987888 -0.6861737 10.0426066 9.3124260 11.6760535 11.9793936 8.3250630 9.9174620 8.8607301 8.9540805 5.0142749 -0.6861737 0.8987888 4.0142749 8.7040046 9.0125405 9.7598850 2.4837513 8.2873896 5.0142749 10.1679249 5.5992374 9.6221747 NA 10.7168477 3.8373983 7.3472590 9.6407708 6.3719352 6.6625644 8.3609594 7.2504737 8.6888752 -0.6861737 13.1987693 0.3138263 10.4321279 NA 7.8452172 4.5617660 8.4118677 8.4686538 13.5397284 5.7567805 9.0653798 12.5219176 10.8168613 10.8171645 13.0527724 13.2172468 9.4236664 11.2515773 13.0949904 8.9915553 9.1033694 10.2018179 -0.6861737 7.7650467 11.7117776 11.5107451 7.6581315 9.1918866 8.9211661 9.5036602 10.5759482 5.4635832 9.0451546 10.5800365 6.8295350 3.1211978 6.1082505 8.2837977 12.3058889 9.9174620 7.4887616 7.8295356 13.0696621 7.3025201 11.2781765 10.0712257 10.2326989 9.8432663 10.6991588 9.1980061 0.8987888 8.9328634 7.0417566 7.0485457 11.0724753 9.1718165 10.2825025 10.9067598 8.0796357 13.1992337 9.9836066 9.6402652 13.1304194 10.8534792 9.9612941 2.6357544 TCGA-B6-A0WV 67 1 2422 NA breast stage iib t2 n1b m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 74.60.0 3 1 1 2 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.112456e-07 12.4570171 4.0954181 7.2904355 11.2782059 -1.1526444 10.2355093 2.0174231 10.6831477 11.6784034 7.6483921 10.1247794 7.3110162 9.2727079 7.3905241 6.2568823 9.8905193 10.2077905 10.2981878 6.7782296 0.4324250 10.0775125 9.0410173 14.5331443 11.3272723 9.9263099 11.0010441 2.9349505 10.9576490 NA 2.0174231 5.9455234 11.3732575 12.1298566 8.2333546 11.8852106 13.5538801 8.2821201 6.2904355 2.6548479 6.4399489 8.5479317 9.7339508 7.0763111 12.9327985 1.1694120 8.1259414 14.1845912 4.0174142 8.9376045 11.4562089 8.5531243 7.2181796 -0.1524841 13.5359850 9.0678705 2.3069330 6.9135812 14.1439064 0.4324250 10.2398095 11.4128322 9.5322406 11.2616488 9.6628754 9.8219066 0.4324250 11.7000215 9.7407935 6.5822022 7.0954192 0.4324250 11.6123636 14.8328003 8.1851584 11.2642896 11.0969018 8.2716582 1.6548479 4.4622029 8.1626416 9.1294221 11.2132677 0.4324250 3.7054693 7.4020809 10.3053859 11.4798057 7.4985437 2.3069330 3.6023737 10.2028432 11.9937425 3.0174231 14.0920417 7.0274007 7.6644757 11.4985437 11.6726496 12.7927530 7.8781595 9.7833938 10.8983610 10.5016806 10.8322665 5.7178573 8.2611199 11.9746803 10.5969425 NA 10.4881889 9.1951133 0.4324250 2.0190258 10.4106884 10.7011915 9.9664331 10.1300014 15.1760092 10.7354742 10.0447087 8.8946159 0.4324250 15.7019709 8.9000601 12.7711909 9.9832013 10.7400349 8.3513178 8.6023797 10.0317537 -0.3182100 0.1776900 0.1776900 0.1001600 0.1001600 -0.1032900 0.3977800 -0.4602500 -0.4602500 0.7058800 0.0485460 0.0693820 -0.0721610 0.1783000 0.2945300 1.6907000 -0.5494500 0.2881800 0.2881800 0.4592200 0.5266000 -0.5419800 0.6446900 -0.5663400 0.7139200 -0.0080784 -0.0080784 0.0108420 1.0306000 -0.3500600 -0.3182100 0.0000000 0.1001600 -0.1032900 -0.1032900 -0.5435100 0.4228400 -0.4602500 -0.4602500 -0.4752200 0.1852500 0.2373600 -0.5943900 -0.5432000 -0.5215400 -0.0223320 -0.0223320 0.1783000 0.1783000 0.2804200 -0.5531700 0.2881800 0.2881800 0.2881800 -0.4951500 0.4602400 -0.5343900 -0.0008316 -0.5698200 0.1867700 -0.2088300 -0.0080784 -0.0080784 1.0570000 -0.1186100 0.1348000 0.000 0.178 -0.535 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.254 0.254 0.000 0.000 -1.293 -1.293 0.000 0.000 0.178 -0.535 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.254 0.254 0.000 0.000 -1.293 -1.293 0.000 6.9870434 12.6275191 8.8795379 9.1862284 2.7340484 10.5608786 -1.1526444 NA 8.4877372 7.6740404 1.4324784 6.2904355 3.3069184 10.5396716 9.1626416 0.8475159 7.5304867 10.1973262 9.8147183 10.3537996 9.6356068 8.5287303 9.5074880 0.3585088 7.7543825 9.8219066 1.4324784 3.1694280 10.1851139 2.4324517 11.8845242 11.8322665 6.9560160 9.5591591 6.8809144 9.6288518 7.2737564 0.4324250 0.4324250 5.7423108 9.1772885 8.8432590 10.3363364 3.5479310 9.0621025 7.1873422 9.6032142 5.2568823 10.1328942 NA 11.5898015 1.4324784 4.0174142 10.0476796 7.0836017 NA 8.7633714 5.4622029 7.5199177 1.4324784 13.6799865 -1.1526444 10.7969540 NA 7.6548472 3.1694280 8.7301352 8.3393450 13.925172 6.886411 8.737756 11.885211 9.422086 10.765610 12.932799 12.361220 8.302819 11.109881 12.413308 9.951436 9.129422 8.458517 -1.152644 7.784130 11.841669 10.851010 8.409735 8.946840 8.638655 9.802415 10.286190 3.017423 8.662875 11.327272 4.017414 2.934950 4.017414 8.675597 9.955363 9.876089 10.731983 8.785601 11.178689 2.547943 9.532241 10.949468 11.278467 8.694549 10.740794 9.196220 1.654848 8.592965 6.628459 1.432478 11.479806 5.114280 10.193452 10.202843 7.196220 13.151843 10.074506 9.471374 12.689842 10.289399 9.478669 NA TCGA-B6-A0WW 58 1 558 547 breast stage x t2 n1b mx 2-10-2014 female 1997 NA NA infiltrating ductal carcinoma yes 5 black or african american not hispanic or latino 74.60.0 3 1 5 3 NA NA 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.503025e-07 11.5097536 -0.8162912 7.2550673 11.3628922 -0.8162912 9.1976256 0.7685866 10.3218769 11.5670394 5.9780217 9.6203166 7.1608849 8.7723199 9.6192754 7.2443010 9.5089105 9.2483479 9.0446919 6.5929966 2.3535209 9.0196555 9.0934981 13.8989236 11.5153618 8.5055333 10.4993207 4.8274634 10.6291321 0.7685866 NA 6.8056575 10.1551486 12.5779338 7.4550683 13.1672222 12.6018530 8.8489409 5.7835169 4.1836056 5.8560296 8.3758978 8.9731388 6.6834508 13.3836608 3.1835977 9.2293646 13.3836608 6.1261201 9.9444165 11.8944115 7.4919445 6.6014573 NA 14.0223107 7.5972332 1.7685866 8.3560324 NA 3.2710670 9.9575684 10.2011095 10.6218771 10.7115707 9.9216974 9.2737175 2.6430481 11.0719678 9.6491716 3.8274634 8.7779296 NA 11.0769066 14.0322769 7.5541184 11.8502729 11.2341340 8.2059731 1.5055353 6.8202300 8.4851011 9.0949971 11.0133278 0.1835818 6.0662485 7.2657538 8.2307290 10.8161460 5.5586442 3.9909639 3.4315294 9.5389562 11.5493807 3.0904978 12.9635296 4.0904978 6.6512110 11.2644226 14.0250712 12.5915367 9.1024684 10.3771305 10.5716224 10.0470170 10.3327171 4.8560296 8.0133277 11.7593807 11.6281024 0.1835818 10.2670844 8.6223971 0.7685866 2.6430481 9.0164952 10.6789605 9.7012744 9.0446919 15.1810713 9.6337854 10.9583921 7.8453834 3.6430365 15.6421078 7.7872313 12.2966961 10.2590843 9.7140114 9.3205961 8.3051388 10.8596811 -0.62411000 1.12920000 1.15710000 -0.64236000 0.01237600 -0.00733390 0.03848900 -0.02109800 -0.02109800 2.75350000 2.10160000 1.75810000 0.03157700 0.04358200 -0.63140000 3.65690000 -0.63443000 0.01251600 0.01251600 -0.64076000 0.28074000 -0.62792000 0.07642200 0.05677600 0.05677600 0.01824300 0.01824300 0.01824300 0.08739000 -0.62411000 -0.62411000 0.04982400 -0.64236000 0.07627900 -0.00733390 0.01153900 0.01153900 -0.02109800 -0.02109800 0.00069863 -0.01358200 0.00180300 -0.62775000 3.65690000 -0.64919000 0.04575000 0.07009900 0.04358200 0.04358200 -0.63140000 -0.63443000 0.01251600 -0.04849600 0.08103300 -0.65475000 -0.36340000 0.03002900 -0.59993000 0.07642200 0.05677600 -0.63678000 0.01824300 0.01824300 0.07262200 -0.17879000 -0.56773000 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.179 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 0.091 -0.639 -0.639 0.000 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.179 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 0.091 -0.639 -0.639 0.000 7.8944116 12.7446543 7.8701058 9.2973473 NA 11.0848491 NA NA 8.3434762 8.6714452 NA 7.8701058 0.1835818 10.7941686 8.6633852 -0.8162912 5.8840459 9.7496591 8.8274612 10.5049695 9.3286711 7.6714448 10.8648435 1.5055353 7.0784230 9.2737175 0.7685866 NA 10.7830531 2.9909549 11.6814569 11.5422563 7.5887469 10.1246527 9.6192754 9.5510199 5.2710670 0.1835818 NA 0.1835818 9.0738695 9.3560326 11.0318368 3.1835977 7.2063062 6.6014573 10.6004026 6.1608859 9.5089105 NA 10.8184162 2.6430481 3.1835977 10.3349769 4.9909594 2.5055353 9.2252643 6.7983150 6.7227638 -0.8162912 13.2550675 NA 10.3900090 NA 6.1836056 5.5234553 8.6056699 8.3257120 14.125206 5.523455 8.459730 13.167222 9.934312 11.262089 13.383661 10.955507 8.436271 10.914924 13.886914 9.215651 9.094997 9.941828 NA 7.388177 11.469585 11.085980 7.312888 8.431533 9.462055 8.549927 10.329906 5.393059 4.643037 11.515362 6.402773 2.768565 4.312890 6.316079 10.310955 10.730982 8.105446 8.019655 11.923597 3.827463 10.621877 10.611965 11.800154 9.165172 10.838689 8.323157 9.323156 8.629448 7.431533 3.643037 10.816146 6.848941 10.180785 9.538956 6.827461 12.367861 9.606721 9.837346 12.840030 9.703241 9.558645 1.990955 TCGA-B6-A0WX 40 1 653 NA breast stage iiia t3 n1b m0 2-10-2014 female 1998 NA NA other specify yes 9 black or african american not hispanic or latino 74.60.0 4 4 4 1 3 3 2 5 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 5.562279e-07 1.946798e-07 11.4405455 7.1898591 6.4213243 10.3196777 0.6011260 10.0147727 NA 9.0020243 10.6852889 8.6179530 9.2629229 7.7909694 8.8203133 9.7654232 7.2413902 8.9761843 9.1089394 9.9647320 8.6899330 -0.3987789 10.4765102 10.8233359 12.8916677 10.2512991 9.5414585 10.2858934 6.3015840 10.5676503 1.7710827 2.4084945 7.7685628 12.2080127 13.0230781 7.9891623 12.0336867 11.6472457 10.6273224 7.1936022 2.4084945 8.7381358 8.5005017 9.3299156 9.1138854 10.4853153 NA 11.8012771 9.7489858 8.5954984 11.0259069 11.0295050 8.1991973 4.7096711 NA 13.7826524 11.5134728 3.4084945 8.8679314 0.9230351 3.6011498 9.5355728 10.0513251 10.5473201 9.9783554 9.6428039 10.3024512 8.1207812 10.7448469 9.4876035 4.3290662 8.5997351 4.5553438 6.5200073 14.7023409 7.6547993 11.8823504 10.9233547 11.5844948 0.1861202 5.1089384 9.3535255 8.8549924 10.9348592 0.9230351 4.3560311 7.1403032 10.2911428 10.8099888 8.3273631 5.8395490 4.8490735 9.4868413 11.6069448 3.3560311 12.9915825 6.0849614 7.2341401 12.1702884 14.5361026 12.7770062 9.7934377 10.6102736 11.4018425 10.8113260 10.3730470 3.3015876 8.7135845 11.6990124 10.8434258 0.1861202 10.3543616 10.2779835 0.9230351 3.6011498 9.3792220 12.6128089 9.7168388 9.8437236 14.8265782 10.1600438 10.1542941 8.0728202 4.2158572 12.0156980 7.4807280 13.2746195 12.9783554 9.7362128 9.9202524 8.0461598 10.5783425 0.9530900 1.3522000 1.3399000 0.0334450 0.0140220 -0.4669300 0.0030880 0.0205190 0.0126630 0.6440700 0.9204700 0.9134500 0.0199590 0.0265500 -0.4299300 -0.2053200 -0.2053200 0.0058668 0.9416500 -0.4749800 -0.4640600 -0.4692600 0.5152900 0.0235100 0.0235100 0.2623600 0.2907600 -0.4377500 0.0285180 -0.4457400 0.9530900 -0.0328240 -0.4287400 -0.4669300 -0.4669300 -0.4830000 -0.4830000 0.0205190 0.0126630 0.0223400 0.0264670 0.0605450 -0.4743500 0.0244440 0.0244440 0.0244440 -0.4516600 -0.4649100 -0.4649100 -0.4365600 -0.2053200 0.0058668 -0.4699000 -0.4699000 -0.4713800 -0.4640600 0.2584400 0.0664090 0.5152900 0.0235100 0.0184190 0.2623600 -0.4377500 -0.3883600 0.8997400 -0.4127500 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.262 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.920 0.000 -0.452 -0.103 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.262 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.920 0.000 -0.452 -0.103 9.4599029 13.3785543 3.4591299 10.3320395 5.7924519 11.1889223 4.1861043 4.4837900 8.8419360 8.0809252 7.4276933 10.6335350 4.4837900 10.7810539 9.4125195 2.5080229 9.6304320 9.5819984 8.2377692 9.9471045 8.8970401 6.5553407 10.8206159 1.9230731 8.5274406 10.3024512 3.8105973 -1.3989691 10.6829611 2.5080229 13.6626004 12.4743005 7.9913138 9.7451657 8.8081591 9.0564722 5.9230731 -0.3987789 1.1861202 6.0929981 9.0646692 9.2691433 8.9398812 4.3290662 9.4951591 7.4084996 10.9080610 5.9934615 10.5129113 4.2158572 12.9857262 4.2735681 5.5898294 10.6940110 7.4360269 6.3222436 9.4036612 7.1898591 8.6318118 6.0440881 14.2783139 2.4084945 9.9821470 NA 9.2468033 5.6011438 7.8057161 8.0950003 12.166636 6.606769 7.954292 12.033687 9.632501 11.614293 10.485315 10.497477 9.116845 10.675955 13.486937 10.467265 8.854992 9.253093 NA 8.012656 11.483024 10.677292 5.027411 9.896914 8.731715 8.595498 9.854892 7.248603 7.104971 10.251299 9.407694 5.820314 9.989700 7.086008 11.948351 10.670930 7.352689 8.347659 8.540724 7.189859 10.547320 10.030028 11.949043 10.489888 10.442316 8.171001 5.612373 9.045922 8.723960 8.116845 10.809989 7.640064 10.289435 9.486841 6.976445 15.201914 9.925325 10.560785 12.203380 11.560422 9.290269 1.923073 TCGA-B6-A0WY 40 1 3461 NA breast stage iiia t3 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 74.60.0 2 2 1 4 NA NA 3 3 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.781139e-08 12.78986496 4.66038674 6.79539683 11.45956543 1.94155708 9.65409501 NA 9.66721836 11.45578893 8.07941331 9.54024101 7.29324356 8.64085117 10.40645408 6.13796454 8.97682529 9.52965797 10.09131518 7.93780634 2.16394950 9.28955854 10.30021927 14.25000189 10.94156801 9.50952404 11.02327337 6.02903097 10.59142295 0.94155708 -0.05844292 7.12147757 13.08447283 12.90608941 9.17518774 13.06531225 12.54024094 10.68303504 7.61163422 4.98596031 7.62806855 8.51268872 9.17598635 9.11732544 12.45587116 2.88017613 10.41120981 13.27881826 7.02194160 9.86535113 11.13735033 6.42269554 7.89770209 0.67852268 14.87071424 11.73741831 4.00045979 8.67627764 -0.64340542 4.08452354 9.45792461 10.06482722 9.99820580 11.65007718 9.44340525 10.24420695 2.81604669 10.57879666 9.64316335 6.56605861 7.74677429 8.87427504 10.74919132 15.25853305 6.70559921 11.00136315 11.36240550 8.02726189 3.11149878 3.74892274 8.42403986 9.37619638 12.87581177 NA 5.05704730 7.34812705 9.94532019 11.19816992 11.02171936 5.15102263 4.16395755 10.38796216 11.69742925 3.05705163 13.27061687 5.86439913 6.78705758 12.78070621 13.41231165 12.38666914 8.30204939 11.11024016 10.92051677 10.33745198 10.74084966 4.37897626 9.15912180 12.43875459 11.21594621 NA 10.31189224 9.41595003 2.35659458 4.86249603 9.79851230 11.36608431 10.16113995 9.76758677 15.39261813 10.11898765 9.87967744 6.74030967 4.26349269 15.29654053 9.21458650 12.88499861 12.34768445 9.86885218 9.81449931 7.82012981 9.88201861 -0.20040000 0.06536000 0.06909500 -0.20000000 0.63224000 -0.19750000 0.21852000 0.22037000 -0.20124000 3.65690000 -0.42320000 0.93081000 0.00000000 0.01545400 0.00416320 0.41932000 0.41932000 0.21530000 0.21530000 0.14544000 0.22114000 -0.00027724 0.21484000 0.21484000 0.20804000 0.19162000 0.19162000 -0.22404000 0.60611000 -0.20040000 -0.20040000 -0.00060059 -0.20000000 -0.19750000 -0.19750000 0.22160000 0.22160000 0.22037000 -0.20124000 -0.20124000 -0.19982000 -0.20535000 -0.43659000 -0.12524000 -0.12524000 -0.12524000 0.15562000 0.01545400 0.01894300 0.00430210 -0.20858000 0.21530000 0.21530000 0.21530000 0.17317000 -0.20871000 -0.44189000 0.21914000 -0.21231000 0.21484000 -0.21601000 -0.21849000 -0.22404000 0.21008000 -0.21664000 0.22653000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 8.38727249 13.63676008 6.84845895 10.39140450 2.41751500 11.13837504 2.26348518 -0.64340542 8.71745263 8.30204939 -1.64340542 8.29324356 2.81604669 10.51805235 9.36363280 2.94157586 9.16073644 10.09638613 9.72402025 10.34458009 8.94747330 6.80368814 11.41205746 2.81604669 8.67401815 10.24420695 6.66494499 -0.64340542 10.95186306 5.08452779 13.02908613 12.41730149 8.65122645 9.80213779 10.73381604 9.75106816 5.09807420 1.67852268 -0.05844292 0.94155708 8.90735218 9.99549399 9.94532019 5.26349645 8.49772931 7.77656595 10.03564576 6.34528992 9.74354577 -1.64340542 11.48685432 2.60452210 5.64200836 9.34224827 6.24028761 2.88017613 9.58842682 8.28438365 8.33245329 -0.64340542 14.02706817 0.94155708 10.99526770 NA 8.30934674 8.07256729 8.22697038 8.99050905 13.0586158 5.3338852 8.5012640 13.0653123 10.3158831 10.3474186 12.4558712 11.5876767 9.1910765 10.6640910 12.8085893 11.2382931 9.3761964 8.7478492 -0.6434054 7.5854245 10.6919959 11.4243760 6.2453492 8.6431632 9.1231344 7.8036888 10.6706223 6.6603867 8.8977021 10.9415680 7.2300493 2.0570343 8.1510216 7.8112546 12.4050073 9.9335622 9.3474187 9.4327532 11.3841660 5.5464315 9.9982058 11.0618059 10.5994819 10.3513125 10.7878419 9.1346827 -1.6434054 9.2231814 6.6649450 6.3509586 11.1981699 4.9713136 10.7901910 10.3879622 7.0535730 13.9253633 10.1005983 10.3016836 12.9608113 10.5280951 9.3064322 -0.6434054 TCGA-B6-A0WZ 50 0 NA 3941 breast stage iib t2 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 11 black or african american not hispanic or latino 74.60.0 5 5 2 2 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 3.337367e-07 10.1296187 3.9933302 7.2027801 11.5442483 NA 10.1352015 NA 8.5576494 11.2317313 9.7006858 9.5993111 8.1169776 8.1867397 8.8837289 8.2447016 10.0342390 10.6712064 9.3452697 6.1338080 1.1188248 11.0569668 10.5871421 13.0405745 10.5239989 9.2753619 9.9861363 3.9601595 10.0101349 NA 1.1188248 6.4347616 11.5011212 12.2307539 5.9175988 12.9276876 12.7676644 9.7989239 6.0961374 2.6213603 5.7627129 8.5296621 10.1650720 7.1188570 13.1389693 1.8558303 11.9154379 13.6529171 6.5782897 9.5147486 10.5996477 8.0923158 6.9517475 0.5338623 14.1428370 8.6738811 -0.4661377 7.6450308 NA 3.4407795 9.0004812 9.6580163 10.1023261 12.1912134 9.4340070 9.8187191 NA 11.0045538 10.1472240 7.4407853 8.8991240 11.1139179 12.0161988 14.2968739 7.8574679 10.2203955 10.9102917 9.1310163 1.9933121 3.7038205 8.5268333 7.0574568 11.8720742 NA 5.9851065 7.2549946 8.0357322 11.7920193 4.8558253 3.7038205 2.9262082 9.8030216 11.7673649 1.5339121 13.2987148 7.0416898 6.6631781 12.9947348 13.1071871 13.1956174 8.4437881 10.2719873 10.5314274 9.7460813 10.3805606 3.6213603 8.7212472 12.2735701 10.5676621 0.8558303 10.1582335 8.0807893 -1.4659384 3.1224574 9.1263521 9.9758017 9.9029470 8.8947420 15.9768790 9.6772781 9.1113238 8.9933265 3.2343327 15.8257312 10.5871421 13.4167295 12.4259634 10.1009004 9.4902711 7.3444664 9.8750413 0.00221930 -0.00885260 0.57095000 0.00249690 -0.00581400 -0.00951740 -0.00774820 -0.01257600 -0.01257600 -0.00664320 -0.00664320 -0.00664320 -0.00041585 0.00027728 -0.00138580 -0.00138580 -0.00138580 -0.00429290 0.00000000 -0.01285100 0.57416000 0.00110930 -0.61374000 0.00305220 0.00305220 0.43598000 0.43598000 0.43598000 0.00666530 0.00221930 0.00221930 0.52398000 -0.00581400 -0.00166290 -0.01450300 -0.01099800 -0.01099800 -0.01257600 -0.01257600 -0.01257600 0.57309000 0.57309000 -0.00664320 0.36789000 0.36789000 0.36789000 0.36789000 0.00027728 0.00027728 -0.00138580 -0.00138580 -0.00429290 0.00000000 0.00000000 -0.01285100 0.57416000 0.00110930 -0.61335000 -0.61316000 0.00305220 -0.01464100 0.42654000 0.43598000 0.00666530 -0.00360110 0.01712400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 7.7286518 12.5268333 5.8006825 9.0740232 -1.4659384 10.8097285 2.4407928 NA 8.7663159 7.8239136 NA 6.0652772 2.8558303 10.8345335 9.5310744 2.2343480 7.0337412 8.0515646 11.2757832 11.2599002 8.7651883 7.9369070 10.6883967 0.5338623 8.7983377 9.8187191 2.1188580 NA 9.8831762 2.8558303 13.5269218 12.3474758 6.7627142 9.4370236 9.3144348 10.2808291 4.5111770 0.1188913 0.8558303 5.3793853 8.7421292 9.8065248 10.1655267 1.8558303 8.5133344 7.9706064 9.3778161 5.7530643 9.1439972 -1.4659384 10.7705071 -1.4659384 4.3918777 10.3408796 6.7322421 0.8558303 9.7603071 6.9685228 4.9933256 NA 14.1758056 NA 9.8518729 NA 9.7824156 4.7627156 7.6554284 8.9485801 12.8428788 5.5999842 8.6358708 12.9276876 10.5090264 10.8611670 13.1389693 12.4244443 9.2089698 9.9554339 12.0844013 7.9411627 7.0574568 10.3319617 0.1188913 7.0961374 10.7980444 11.0586815 6.3020796 8.7347936 8.7959899 8.3017650 10.2283922 5.2887830 7.4646323 10.5239989 6.8146658 4.2618166 6.7335672 7.0029264 10.5057978 10.9219123 7.0574568 9.2686047 10.1179180 2.7038095 10.1023261 11.0050621 10.9750236 8.7566897 10.5834032 8.3185297 -0.4661377 9.4887819 6.0177104 1.8558303 11.7920193 6.7038205 11.0042996 9.8030216 6.3793853 13.6214407 10.3331766 10.3636177 13.0191583 11.3652022 9.6113784 -1.4659384 TCGA-B6-A0X0 54 1 3945 NA breast stage ia t1c n0 (i-) m0 2-10-2014 female 1996 NA NA other specify yes 0 white not hispanic or latino 85.58.0 5 2 2 NA 2 1 1 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.39057e-07 10.5846131 3.6646194 7.2438404 11.3360294 -0.7276184 9.5154714 NA 9.0876806 11.8961788 10.5594325 9.7337768 7.5011159 8.4015806 10.4878303 7.2835246 9.4409694 10.5472578 9.3221458 5.1051878 1.8572644 10.0536570 10.6413493 12.6812904 11.7701492 10.2638192 10.2221240 4.8870085 10.3597602 NA 3.4422269 5.2946649 11.6325958 12.7154999 6.3166906 13.4316168 13.0469815 8.7681522 8.9951049 5.2030328 5.7800922 8.0503744 9.3873410 6.8722107 12.8798588 2.7317263 10.1115011 14.4841856 4.7958604 9.6901288 10.4829687 7.8534980 4.2722995 0.2722621 13.4401419 7.5249624 2.2722920 8.3221458 -0.7276184 3.0796512 9.2722974 9.7368431 9.7671529 11.8614803 10.1107134 9.9587979 NA 10.7973287 10.3214652 6.3166906 8.9161536 6.3491122 11.6029341 14.8359405 7.9562391 11.6451624 10.9848243 9.5071147 3.4422269 3.4422269 9.2595613 8.4522062 12.0444057 NA 4.5576980 7.8796274 8.6342411 10.7480308 4.4015827 2.4422269 3.1791925 9.6429847 12.2570718 2.7317263 12.9820274 6.2030347 6.9089222 13.1085450 12.5387911 12.4790065 7.7193806 10.6715752 10.9985155 10.3015846 11.0820655 4.6646137 8.9865429 11.5047183 11.4490938 NA 10.2616918 9.2524369 NA 2.4454354 9.8534980 12.1295008 10.2918881 9.2624012 14.8420640 10.3990018 9.0812616 8.0338486 0.8572644 16.1950675 10.0313533 12.1197462 11.9880449 10.3424183 10.1919056 8.0305204 11.0576068 -0.00041585 1.06290000 1.08190000 0.00194180 -0.00800120 0.00000000 -0.00304750 -0.00443120 -0.00443120 -0.63377000 0.02440800 0.02440800 0.00402430 0.00402430 0.56689000 0.56689000 0.56689000 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00180300 -0.00346270 -0.00346270 -0.00346270 -0.00138580 -0.00138580 -0.00138580 -0.00152430 -0.00041585 -0.00041585 -0.00443120 0.00194180 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00443120 -0.00443120 -0.00443120 0.01112100 0.01112100 0.04145800 0.00597000 0.00597000 0.00597000 -0.00369640 0.00402430 0.00402430 0.56739000 0.56689000 -0.00152430 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00180300 -0.68833000 -0.00346270 -0.00346270 0.01014600 -0.00138580 -0.00138580 -0.00152430 -0.00304750 0.00665910 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.1488141 12.1610406 6.7800922 8.7781090 NA 11.0744098 -0.7276184 -0.7276184 9.3289349 6.6731762 NA 6.7235080 0.2722621 10.1333842 9.0404815 NA 3.9727386 8.8553802 8.9161536 10.1985934 9.6816564 6.6298491 9.9596729 1.2723219 10.5998500 9.9587979 10.0972560 NA 10.3827806 2.2722920 14.6547525 12.4653606 5.9727363 9.6462500 6.6298491 9.3491129 2.9727294 -0.7276184 -0.7276184 0.2722621 9.0972560 10.1411199 10.2814261 2.4422269 7.7770764 7.1488141 10.3918869 5.8421517 9.6232364 NA 11.2584949 1.5942141 3.5942261 9.9049744 7.0661936 1.8572644 9.3676943 5.5011174 5.3808229 NA 14.9425110 1.2723219 9.9107333 NA 9.1162184 4.9161518 7.3329934 8.6774388 13.581489 5.316692 9.235193 13.431617 10.425849 11.547549 12.879859 12.586597 9.946490 10.584046 13.498333 12.656137 8.452206 8.564619 3.179193 7.557700 10.845945 11.392211 7.864754 8.951777 9.505917 8.645162 10.742082 5.179189 6.986543 11.770149 5.612146 1.272322 8.562316 5.578996 11.914123 10.010390 8.901654 9.027185 11.803435 4.226493 9.767153 10.272297 10.450962 9.298821 10.739903 9.517850 NA 9.916568 6.664615 3.179193 10.748031 5.380823 11.113712 9.642985 7.520225 14.733393 10.156468 10.755105 13.361500 11.310873 9.761142 1.272322 TCGA-B6-A0X1 48 0 NA 5672 breast stage iv t2 n2 m1 2-10-2014 female 1994 NA NA infiltrating ductal carcinoma yes 16 white not hispanic or latino 74.60.0 4 4 4 1 1 3 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.168079e-06 3.337367e-07 12.1539133 NA 5.2702374 11.8543530 0.1204847 9.6846398 -0.8793826 9.2355339 10.9549613 10.8026070 10.4231291 8.0273808 9.2904152 9.2407281 8.6865443 9.9454490 8.1703387 10.2059627 8.1621496 3.2079553 10.1247107 10.7778087 12.7413974 10.8252585 9.4791414 10.2765733 6.4058920 10.6430571 4.9018516 2.9278396 8.9706771 11.3100060 12.4359229 8.4625648 12.4390331 10.6445422 9.0891570 8.0333795 5.0273797 8.2052987 7.9213899 6.8619578 5.4955289 4.3299416 NA 11.1821990 10.5824812 9.0703169 9.2916045 10.9334697 7.1703387 8.3078424 3.5799163 14.8579219 10.7162140 1.4424393 7.5298811 -0.8793826 6.1648848 10.0934700 10.7787017 9.6741195 8.9116532 9.3896169 9.6969747 0.7054914 11.3784673 11.1723789 6.6361896 8.1091751 8.7016908 7.0213576 13.9167834 8.1613551 11.0916745 10.9842894 11.1013438 4.2497715 -0.8793826 8.7166799 9.6371751 10.1566638 NA 2.7054472 8.7964472 11.4336567 9.7305924 4.0746852 6.9342712 7.5213696 9.5891142 11.9430611 2.2904244 13.1296190 5.0512285 7.3250616 9.4636760 11.4090680 12.6223274 8.3565044 10.3469025 10.7688479 10.2497604 10.7844930 5.3379144 7.7388759 12.6190902 7.7425419 NA 11.3843463 10.1077543 3.6440524 2.1204847 9.0761400 7.7822683 10.0061866 9.4835298 15.7453143 11.3278097 10.8217967 7.0393534 -0.8793826 11.9681349 5.2079514 12.5013571 12.0911354 9.3517114 9.6352042 8.2954158 10.3521555 0.0038854 0.7784900 0.7480300 1.6708000 0.7889100 -0.0938480 1.5662000 0.5625900 -0.0838640 0.5784400 0.5784400 1.7714000 0.7671500 0.0542330 0.8697000 1.4205000 1.3830000 2.1219000 -0.0960990 -0.1410300 -0.0877120 -0.0900960 -0.1043400 0.5913400 0.6476300 0.0059263 0.7039300 -0.1362600 -0.1095900 0.7564300 0.0038854 -0.1248600 -0.0276710 -0.1182200 -0.0941960 -0.1171300 -0.0863860 -0.1103700 0.6052100 -0.1171700 -0.1081500 1.5485000 0.5197800 0.8149300 0.8149300 1.4312000 -0.0564420 0.9725500 -0.1190000 0.8780700 -0.1002600 0.6465300 0.7434700 0.7158400 -0.0809900 -0.0720070 -0.0268510 -0.0213730 -0.1043400 0.5913400 1.3823000 0.0059263 -0.1208800 -0.1095900 -0.0820040 -0.0986820 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.719 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.719 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 7.4333735 10.1973059 4.4058903 7.0920340 2.5799283 11.1400810 NA NA 9.0600695 8.7534855 1.7054472 4.7637674 1.4424393 10.8841176 8.8017287 2.8209346 4.1204930 9.1865795 6.9659805 8.9533802 10.0047295 6.2803625 11.1926229 2.8209346 9.7231891 9.6969747 3.1204847 NA 11.1624916 8.0243723 11.8686831 11.9246213 6.0031322 9.0016041 11.2705549 10.1077543 4.1648828 3.5799163 0.1204847 2.4424128 7.3103147 8.9877691 6.1648848 0.7054914 7.2261896 7.0630046 10.1621495 3.9784702 10.2355339 1.4424393 9.4139619 5.5467556 4.6123407 9.3182475 7.0447089 4.2904170 8.8853617 8.4514073 5.0746852 10.5623970 12.7967779 -0.8793826 10.7087365 0.1204847 9.7287450 2.9278396 9.1359052 8.5921655 14.171827 9.766149 7.878714 12.439033 9.894454 11.101344 4.329942 5.834736 9.812234 12.106688 13.282960 11.566281 9.637175 7.624316 4.978470 8.389617 10.803046 11.0471569 6.0746874 8.6263019 8.7461992 10.2257440 9.5294993 7.7204030 4.4780399 10.8252585 10.9741897 NA 7.5467548 9.8843250 12.7482521 11.9384732 8.3149761 9.2446117 10.7593787 10.6640055 9.6741195 10.1635176 11.2003084 8.9908550 10.8091777 9.0949048 -0.8793826 9.7060256 7.0501632 5.2702374 9.7305924 7.6043064 10.7806511 9.5891142 7.8853620 12.8659545 11.2897889 10.3696037 13.2875163 10.8048006 9.1879246 -0.8793826 TCGA-B6-A0X4 62 1 860 NA breast stage iib t2 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 74.60.0 5 5 2 2 NA NA 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 8.343418e-08 11.7760562 NA 8.6146057 10.8282807 NA 10.9998702 0.8245642 9.9793467 11.5031288 8.0077505 10.5057670 7.9225606 9.1449531 8.5110291 8.4144920 7.7030903 11.3984913 9.8487448 7.8094215 NA 11.0400617 9.8113188 13.5360522 11.4225811 10.1739941 10.5399186 0.8245642 9.9417388 -0.7604798 3.2395661 4.5249663 12.1283094 14.0562998 7.4194748 12.1099309 12.3440011 9.8160505 7.9049019 5.0724574 4.0975434 8.6211090 9.8441193 6.8468969 13.6623536 3.7631247 11.0135295 14.4915293 1.5614972 9.8177500 10.3163817 3.2395661 7.9084509 NA 14.4119233 7.2450221 NA 6.5063528 NA 1.5614972 9.5716027 10.2880530 11.0830947 9.7020684 9.9128753 9.3467832 -0.7604798 11.0069230 9.7960722 6.2948486 7.8942024 NA 10.5220755 14.2976001 8.9599301 11.3127035 11.2451907 7.4044732 1.2395813 6.1099309 8.5110291 8.8376185 10.1554455 NA 4.0469188 7.5704827 9.7142860 11.4051012 2.6989963 2.5614972 3.5614972 10.4318589 12.1915793 0.2395202 13.4619837 7.2507930 8.2197058 12.0813270 9.8671000 12.7833230 7.2948486 10.6845809 10.7792096 10.8380839 11.0893622 5.6489572 8.1791453 12.0785730 11.1321090 -0.7604798 10.1122410 8.9347945 2.6989963 4.3497616 10.3408852 10.5203369 10.1591744 8.6595264 15.3290787 11.0669088 9.3137075 9.2239845 -0.7604798 16.4207572 6.0597446 11.3316626 10.1569382 10.4069843 8.7274062 8.2757399 10.5873867 2.1340e-03 6.3964e-01 3.8826e-02 -1.1939e-03 -1.1939e-03 -7.2806e-03 2.4883e-02 0.0000e+00 0.0000e+00 7.4672e-04 7.4672e-04 3.6612e-03 -2.1635e-03 4.6336e-03 2.2728e-03 2.2728e-03 2.2728e-03 -1.0041e-02 -1.0041e-02 -6.7281e-03 -2.8557e-03 -8.5189e-05 -2.4597e-03 -2.4597e-03 -2.4597e-03 -4.5162e-03 -4.5162e-03 -4.5162e-03 5.3439e-05 2.1340e-03 2.1340e-03 -4.4393e-03 -1.1939e-03 -7.2806e-03 -7.2806e-03 2.4883e-02 2.4883e-02 0.0000e+00 0.0000e+00 8.8541e-04 6.2421e-02 4.8071e-02 7.4672e-04 -1.1939e-03 -1.1939e-03 -1.1939e-03 -1.1939e-03 4.6336e-03 4.6336e-03 2.2728e-03 2.2728e-03 -1.0041e-02 -1.0041e-02 -1.0041e-02 -6.7281e-03 -2.8557e-03 -8.5189e-05 1.0896e-02 1.9952e-03 -2.4597e-03 6.0805e-04 -4.5162e-03 -4.5162e-03 5.3439e-05 -1.7480e-03 7.1362e-03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.7314195 10.3559101 4.7631300 8.1099309 3.9944530 11.1010408 -0.7604798 0.8245642 8.4755802 7.1703037 NA 4.9400070 NA 10.2246966 8.9810332 0.2395202 1.8245235 10.2197057 12.4352459 10.8056201 9.7864124 8.0077505 10.2125459 -0.7604798 10.3905827 9.3467832 3.0469275 NA 10.0637293 3.6318842 13.3439192 12.3683660 6.3270298 11.1602912 7.6058884 9.1569383 5.2395661 1.5614972 -0.7604798 8.6989977 8.7748414 9.7030905 9.4803574 0.8245642 9.9492962 7.2507930 10.3733506 3.3270262 9.4343230 NA 13.6333588 0.8245642 11.4088648 9.7798589 7.6095563 NA 7.1584289 5.3056569 7.9119917 2.0469101 13.9911102 NA 11.0493343 NA 8.8376185 4.4094928 8.1099309 9.6500174 14.072686 3.698996 8.922561 12.109931 10.620027 10.612431 13.662354 13.912875 9.188225 10.011881 12.542062 11.424751 8.837618 8.275740 1.239581 7.434323 10.198844 10.6425781 7.3893130 8.9657843 9.0404659 8.2507934 9.7605481 3.3270262 9.1404328 11.4225811 6.8394784 7.8431925 6.9606658 5.7339806 10.6835457 9.6835456 9.3476592 8.8338907 10.1137790 1.8245235 11.0830947 10.6897464 12.1776754 8.6658308 10.7428950 9.3336438 NA 9.5109358 6.2626004 -0.7604798 11.4051012 9.1022035 11.9086727 10.4318589 6.9469250 14.5047020 10.7572355 10.4151157 12.9925739 9.5569788 10.3623942 -0.7604798 TCGA-B6-A0X5 61 1 2097 NA breast stage iib t2 n1b m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 3 black or african american not hispanic or latino 74.60.0 3 1 2 3 NA NA 1 4 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 2.781139e-07 11.71650753 3.76071063 9.00338860 11.14827904 NA 10.19043869 -0.09727036 9.37236819 11.32268649 7.63743564 9.41250126 7.98753462 5.36215775 8.87857424 8.52111200 9.92162199 10.09871365 10.26795521 8.33735474 NA 10.32584218 9.06511774 13.90598069 5.97954295 10.34099836 11.09809856 2.60316936 10.25862798 NA NA 5.83346445 11.62724016 11.83383315 6.33735430 11.62018857 13.24299371 8.63574170 2.71008456 NA 4.36216126 9.08263554 10.57426739 8.78230961 13.56216482 -1.09727036 8.13874076 13.43860918 5.85692346 9.83941577 11.17389752 4.22465773 6.77924265 -1.09727036 14.14607662 6.77924265 -0.09727036 8.50077895 NA 0.48769214 9.36931270 10.48109900 10.22690682 10.48298488 9.77386153 9.43897353 NA 11.04387549 9.61611285 4.54657966 8.15775467 7.24257678 11.13933851 13.61820576 8.02695107 11.57493065 10.73125954 5.69714272 4.45731192 NA 5.74821701 7.95529420 11.86146025 NA 5.60316639 7.01125074 11.30760179 11.63616541 7.14590057 4.22465773 3.90272964 6.62382590 12.12642639 6.37033170 13.59103127 5.97954295 7.21106575 10.70200797 11.86616431 12.73838202 7.80057186 10.68121416 11.06070478 10.60337840 10.84083566 5.29504339 8.33526841 11.65907416 10.32689256 -0.09727036 9.91395360 9.56895041 0.90272964 3.22465773 10.53026021 11.22662551 9.49891601 8.92786594 14.82804895 9.57515158 10.11400633 8.36625051 2.90272964 16.10058611 11.16775526 11.94198813 11.64671917 9.74821634 8.97016055 8.12672822 9.82059065 -0.00446220 -0.00446220 -0.00446220 -0.00210920 0.00260460 0.00080959 0.01642400 -0.00335530 0.00218830 0.90755000 0.90755000 0.91052000 0.00163320 0.00163320 0.00357650 0.00357650 0.00357650 0.00875480 0.00875480 -0.96796000 0.01499700 0.00274350 -0.01485700 -0.01485700 -0.01485700 -0.03343500 -0.03343500 -0.03343500 -0.00446220 -0.00446220 -0.00446220 0.01360100 -0.00210920 -0.01106800 0.00538280 0.01642400 0.01642400 -0.00335530 0.00218830 0.00218830 0.01765200 0.00107830 -0.96611000 -0.00606100 -0.00772740 -0.00321690 0.00232700 0.00163320 0.00163320 0.00357650 -0.00446220 0.00875480 -0.01318700 -0.01318700 -0.93400000 0.01499700 0.00000000 0.01499700 -0.01485700 -0.01485700 0.02395600 -0.03343500 -0.03343500 -0.00446220 0.01429900 -0.06089200 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 6.7100818 10.3158253 8.5063528 7.0876018 3.9901925 10.1005574 -1.0972704 NA 8.3394381 5.6441937 NA 5.7356169 NA 10.0968676 9.0307207 6.5026393 6.8096164 9.7583735 10.8609165 10.2448010 9.8285626 7.8215897 10.0851207 1.4876921 9.8532823 9.4389735 0.9027296 NA 9.8612791 2.9901925 13.1505797 12.3563828 5.4725820 10.8699526 6.1506531 9.4867492 7.3078675 1.4876921 NA 6.2336427 8.3845256 9.5528806 10.4375155 0.9027296 7.2293360 7.4144789 10.4375155 6.7419307 10.1023987 NA 10.4360560 NA 3.4876921 10.0068074 7.3144491 0.9027296 7.5786837 7.3163539 7.4876889 NA 13.2797334 NA 10.5689503 NA 3.9471238 3.4262916 8.1291387 5.1881279 12.448380 4.394583 8.894248 11.620189 9.472582 9.433133 13.562165 11.420396 9.361543 10.402572 12.155540 8.700388 7.955294 8.204222 5.011250 8.160114 10.103625 11.099021 8.746647 8.665939 9.083879 10.077652 9.721085 4.394583 9.693075 5.979543 4.809615 1.224658 7.687361 9.091797 8.718110 6.902726 5.990190 8.414479 10.837891 3.150657 10.226907 10.159525 9.450585 8.480155 10.448656 9.099943 NA 8.871882 9.741253 3.426292 11.636165 6.233643 10.305738 6.623826 7.224655 13.051123 10.323213 11.217876 12.120381 10.052473 9.730863 -1.097270 TCGA-B6-A0X7 62 1 1791 NA breast stage x t1c nx mx 2-10-2014 female 1994 NA NA mixed histology (please specify) yes NA white not hispanic or latino 80.55.0 8 2 2 2 NA NA 3 3 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 1.668684e-07 10.7460720 7.0795467 6.6021525 11.5292918 1.9169352 10.0429264 2.2648366 9.9194852 11.8930344 6.7973438 9.8249091 8.0443340 9.1955865 9.5620930 8.1631268 8.9985910 10.8087096 9.4610122 7.3553396 2.0424692 10.7945587 10.0813758 9.6964961 11.4938396 9.2510977 10.3477585 4.5660175 10.4347743 1.7794278 4.4347750 8.1888133 11.2899888 12.6979130 7.1299197 13.2575853 13.5847229 8.8498117 7.4376339 2.0424692 6.9692472 8.8095376 10.1777386 8.2040086 13.5074704 1.4338675 10.6470100 14.4512951 4.9966509 9.3372997 11.0836596 8.6875146 5.6173661 NA 13.8376716 10.9565927 2.9810489 8.1263792 -0.5424582 4.6669497 9.6553254 10.0781723 9.0877614 11.8132583 9.9603261 10.0077601 1.2648366 11.1134722 10.1161521 6.5073427 7.4347742 1.4574892 11.4038524 14.7567560 7.0448214 10.8615714 11.2527223 8.2502847 -1.5424582 6.6173661 9.4347742 8.8017901 10.6784772 -1.5424582 5.4574958 7.0043890 10.1527225 11.1076485 4.1299177 4.6072415 4.6473203 9.8188899 12.1375241 1.9169352 13.4859616 5.1013517 7.7195894 11.6470100 12.2733779 12.7663310 8.8551690 10.2236091 11.0562447 10.8526133 11.2308396 4.9652902 8.4174964 12.2145717 13.0599032 -1.5424582 10.3143088 9.3247730 1.0424342 4.2406883 10.3450957 10.3045517 10.0777141 9.2040086 15.1060766 10.1841382 10.2277452 9.4666230 3.3154793 16.0108461 8.2140505 12.4531731 12.9153240 10.4149592 10.3785914 8.7160605 10.6423759 -0.4916200 0.4751200 0.7655600 -0.0024938 -0.0024938 0.0040243 0.0222250 -0.0019399 -0.0140900 -0.0642400 -0.0642400 0.6864500 0.0031981 0.0174040 -0.0912870 -0.0283240 -0.0283240 -0.0083005 -0.0083005 -0.0015243 0.0102850 -0.0488830 -0.4752200 0.0141900 0.0141900 0.0227250 0.0227250 0.0227250 0.0244080 -0.0548250 -0.4916200 0.0000000 -0.0024938 0.0040243 -0.0070576 0.0222250 0.0222250 -0.0019399 -0.0019399 -0.0140900 -0.5194800 -0.0024938 -0.4885800 -0.0018697 -0.0018697 0.0019418 0.0019418 0.0174040 0.0150280 -0.0912870 -0.4997500 -0.0083005 -0.0083005 -0.0083005 -0.0015243 0.0102850 -0.0488830 -0.4905500 -0.4861700 0.0141900 0.0112610 0.0227250 0.0227250 -0.0458040 -0.3239100 0.0255310 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 8.37337372 13.07099603 9.15446195 10.06574907 2.64890256 10.88297251 0.77938581 1.62742007 8.76127497 10.00294142 NA 7.67908172 3.58677675 9.92050769 9.39486822 0.77938581 9.04245693 9.51142020 10.15923396 10.32400048 9.76296332 7.66206518 10.87244372 1.77942783 10.17259827 10.00776007 3.31547928 NA 10.62773231 5.14399333 12.73848251 12.21133781 8.71134175 10.32129339 9.47638999 9.12460575 4.72427918 -1.54245824 -0.54245824 0.04250426 8.57123652 9.82108148 10.46346961 6.26484978 8.17270152 6.32168101 9.66572870 5.51277680 9.42544105 0.04250426 10.94483188 2.04246924 5.81504508 9.76896453 5.61393235 4.12991766 8.62867118 7.22898411 6.28404212 -1.54245824 14.23528898 2.15794915 10.10585182 -1.54245824 8.22898363 6.63740303 7.95734005 8.18371229 12.833552 3.411684 8.761275 13.257585 10.519540 10.857840 13.507470 12.334107 8.531796 10.405862 12.806568 10.390816 8.801790 11.000284 NA 7.440488 11.163343 11.030195 6.429038 8.457494 9.452555 7.918974 10.648350 5.115707 6.034922 11.493840 6.988876 4.849814 9.040577 5.446405 11.459958 10.187115 8.365887 7.877455 11.431909 6.094120 9.087761 10.538312 11.337269 9.709568 10.526608 8.309244 NA 8.737140 7.560782 6.034922 11.107649 6.921019 10.591279 9.818890 7.274478 13.944455 10.081833 10.237624 12.420481 11.224230 10.391922 2.544955 TCGA-B6-A1KC 67 0 NA 1326 breast stage iia t2 n1 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 109.61.0 NA NA 5 2 NA NA 1 1 2 1 NA NA 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.668684e-07 11.80169013 6.74617972 6.56155832 11.63870198 1.53674921 11.17375364 2.95175563 10.44495213 11.06333420 9.91850952 10.68506167 7.56155832 10.55012658 9.25858511 8.74617972 7.39746843 9.75481854 8.76874740 6.25554416 4.57625607 9.74238388 9.09642211 14.42081202 6.95925780 10.03479979 10.75347217 2.17415071 10.95715444 0.36681177 0.95173698 7.74617972 11.36996784 14.17090712 8.99706852 12.11373546 12.68950408 7.38360926 6.25554416 2.89036886 7.42479279 8.53421961 9.11667068 8.15307114 13.41004226 0.36681177 8.65104703 15.21914794 NA 10.22982606 10.97574911 6.63826503 9.81440110 NA 11.74741929 8.13663898 2.06722567 6.66142183 NA 4.82623322 10.37593009 10.54515494 10.78834020 10.08276325 9.54172700 9.73585333 7.38082207 11.61413550 9.65739617 4.95176495 6.14158810 -0.04826302 10.90450510 14.13449439 9.01417868 12.68816576 11.73585333 8.26161919 NA 4.70665211 9.00161227 9.84708664 9.59321351 1.82623322 7.46746372 6.92522210 11.75239411 10.97135451 5.83440784 5.43288927 3.45426803 10.23330750 11.91742788 5.51654786 13.98438357 7.01785289 8.59802234 9.34836854 12.36292167 12.81388454 9.42072723 10.97459398 11.51718331 11.27248539 10.60401126 6.01785289 7.57868969 11.91261046 12.48558021 NA 10.20600506 9.59742223 -0.04826302 3.12755074 10.33294620 10.59922228 9.28789842 9.19334991 15.00707450 10.85086895 10.64263479 9.00161227 1.36681177 16.94601411 6.05330252 10.80948567 10.20087728 10.33402753 8.83338759 8.80870810 10.08484612 1.06050000 1.06050000 1.06050000 0.67152000 0.67132000 -0.13864000 -0.02376400 1.22020000 -0.70176000 3.65690000 3.65690000 1.23720000 0.19287000 0.22510000 -0.04352700 -0.06258300 -0.06258300 0.56410000 0.56010000 -0.71525000 -0.49146000 -0.23746000 0.65950000 0.65950000 0.68827000 0.31106000 0.31106000 0.31793000 0.42916000 -0.56718000 1.06050000 -0.19913000 0.67152000 -0.16727000 -0.13864000 -0.02376400 -0.02797500 1.22020000 -0.70176000 -0.73244000 0.00000000 0.00063132 -0.72962000 0.23072000 0.23072000 -0.72212000 -0.72212000 0.22510000 0.24397000 -0.04352700 -0.03014400 0.56410000 0.56010000 0.56010000 -0.67669000 -0.51938000 -0.23746000 -0.25012000 0.65950000 0.65950000 0.45131000 0.31106000 0.31793000 1.06830000 -0.71332000 2.51320000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.519 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.561 -0.660 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.519 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.561 -0.660 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 7.41119572 11.14528916 3.17415071 7.41392490 3.95176495 11.26785675 0.36681177 NA 8.07416020 6.32099726 NA 7.40297452 -0.04826302 10.86739427 9.30343921 3.95176495 7.46483324 11.13436509 7.71774016 9.76019183 9.53098544 8.36256851 10.45459562 1.68871749 9.63475842 9.73585333 4.36680478 -0.04826302 9.86265642 5.76768128 12.43826369 11.15592736 7.97966984 10.13705223 7.89036339 9.24255059 8.43289053 7.35548589 -1.63307635 3.85865741 8.48962923 7.54422107 11.16992337 3.89035914 7.85067755 5.54670929 11.28789842 6.27969043 10.34013996 -1.63307635 8.11163492 5.67058261 5.48574238 9.86721494 4.10205338 -1.63307635 8.53045082 8.09472167 5.32099726 NA 13.86658493 -1.63307635 10.47793702 NA 7.71331502 5.50635122 9.28864233 9.18298497 13.263158 5.642927 8.572595 12.113735 9.320270 10.822385 13.410042 12.388996 8.867096 11.160405 12.564172 11.423947 9.847087 8.234080 1.688717 8.255545 13.574235 9.935707 8.695476 9.068108 9.929521 9.609975 9.250590 4.614728 7.840507 6.959258 6.400224 NA 2.067226 6.993387 12.171437 9.111635 8.797254 7.679684 11.443784 3.010655 10.788340 9.907898 11.937606 7.974132 10.131258 9.164463 NA 7.944683 6.326803 2.454255 10.971355 5.121687 10.291614 10.233307 7.261619 14.282607 9.830837 10.699118 12.461704 9.210722 9.539229 1.366812 TCGA-B6-A1KF 68 0 NA 3088 breast stage iib t2 n1 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.110089e-06 2.42832e-07 11.74173991 2.24348630 6.68974504 10.47758799 NA 9.13466529 NA 9.62546448 11.33201232 6.21618128 9.28897563 6.98225664 8.55818573 10.10395536 8.56541706 8.94392865 9.40336040 10.83930600 8.87575734 -0.07841133 8.94254090 11.07384580 14.35171945 9.32670249 9.50933837 10.99737434 1.72892183 10.95153833 -1.07856367 5.03008442 6.66975388 11.99436348 11.63344297 7.68643259 15.31667665 12.13709396 7.76076452 5.36450590 0.50650039 6.50652419 9.78729418 5.00902463 6.25247811 5.95498492 NA 10.85562031 11.74054251 9.16830156 9.47457577 11.96167939 8.37277192 6.45294295 NA 14.27544072 5.53627053 1.50650039 7.65288010 NA 4.41341130 9.68311217 9.92928904 9.93906536 10.09711049 9.04568213 10.04244681 6.38916582 10.84748625 9.44217966 3.16949213 7.90455454 -0.07841133 5.36450590 14.64410169 9.60699309 10.90562332 10.93068974 11.35775196 0.50650039 1.24348630 8.66639481 9.22990007 10.16473487 NA 5.81637955 6.72246056 10.08206266 10.87830010 5.50652261 8.13344948 2.50652578 10.48951705 11.92525452 4.38099259 13.56682533 4.50652578 7.29224800 11.23812531 14.06609970 12.40625800 8.58333893 11.87302782 10.93767278 10.34467684 10.18834751 4.05084122 7.52147403 11.63279772 9.53166295 4.75444928 10.28076138 10.86517464 3.56541439 3.74734443 10.03008539 9.68144909 9.34362568 10.09273772 15.22080475 9.91237397 10.61722427 6.08143124 NA 11.97701286 8.84785695 12.04309446 11.94149909 10.62459937 9.07257747 7.99033943 10.72452553 1.2723000 2.5164000 2.4444000 0.0249460 0.4976700 -0.0109440 0.9815900 0.5108600 -0.0079090 -0.5295200 0.4708100 2.3043000 2.3902000 0.0042793 -0.5101400 -0.5101400 -0.3750600 -0.5063100 -0.5063100 -0.5038900 -0.5239100 -0.5317800 0.0544950 3.6569000 -0.4627600 -0.5081700 -0.5081700 -0.4697300 0.4381400 -0.4918500 -0.5112700 0.0078946 0.0249460 -0.0109440 -0.0109440 -0.5352500 -0.5334900 0.5108600 -0.0079090 -0.0140000 0.0179400 0.0194800 -0.5408000 0.0193400 0.0193400 0.0193400 0.0462520 0.0042793 0.0042793 -0.5101400 -0.3750600 -0.5063100 -0.5063100 -0.5118900 -0.4938200 -0.5239100 -0.5146700 0.5836000 0.0544950 -0.4627600 -0.5422000 -0.4310700 -0.4697300 -0.0165890 0.4978400 0.0756790 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.000 0.000 0.000 -0.506 -0.470 -0.470 -0.511 1.933 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.240 0.000 0.000 0.212 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.000 0.000 0.000 -0.506 -0.470 -0.470 -0.511 1.933 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.240 0.000 0.000 0.212 5.74173932 12.02681472 3.31388433 8.84785695 -0.07841133 12.39957212 -1.07856367 2.50652578 8.40739014 8.57081696 1.24348630 7.77018418 7.27470801 11.13951867 8.51401808 3.31388433 4.34782862 11.01860545 7.22534146 8.59751814 9.55018884 6.48380288 11.63795175 -1.07856367 8.58333893 10.04244681 0.50650039 -1.07856367 9.91874042 3.09147982 12.47471021 13.11554824 9.16235230 10.49046714 6.56541744 9.00636928 2.50652578 2.82844880 -1.07856367 NA 7.55455585 7.06621946 7.08143231 0.50650039 10.07125721 8.00104557 10.87938850 5.94392836 9.90882491 8.73213248 11.92138482 0.92158867 3.77954340 10.12480488 7.11538184 2.24348630 7.77954208 5.53627053 3.87576041 7.37688855 13.18137776 0.92158867 10.76469688 3.77954340 8.74492833 7.33941357 9.03269652 8.34572724 11.518217 7.840424 9.384063 15.316677 9.353059 11.845074 5.954985 9.024849 8.869928 9.837440 14.155929 12.228762 9.229900 6.869928 -1.078564 7.216181 11.356971 11.3820168 5.4761483 8.7919257 9.4626575 8.5399463 10.8123116 2.2434863 5.6764480 9.3267025 5.4451241 -1.0785637 8.8959754 8.9897748 11.6243830 10.1138537 6.8757567 7.4253863 6.8284513 1.9215506 9.9390654 9.6663948 11.6545763 11.8965132 10.7603709 8.3645046 0.9215887 8.9118069 6.3638404 4.8522985 10.8783001 5.8163795 11.2341689 10.4895170 7.1558514 13.2396800 9.9341855 10.2873365 11.8511892 10.5098071 9.6872614 4.5654144 TCGA-B6-A1KI 63 0 NA 2236 breast stage i t1c n0 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 2 2 NA NA 1 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 11.2727338 6.7108546 7.7329116 11.2530956 1.6905065 9.3801866 -0.1839328 9.7108550 11.3584242 9.2693079 10.0372215 7.3655010 8.6330206 9.2795616 7.1499381 9.0820428 10.0991255 9.3132236 7.4478205 2.3185482 10.2335381 10.4616956 13.8052247 10.8312199 9.5467903 10.5628314 4.0890574 10.3836764 1.0384362 5.8676988 8.2240128 11.5539886 12.3491235 8.3238316 13.4751040 13.4264084 9.0552380 5.6822868 1.6905065 8.3435140 8.2781985 8.6115357 6.9623940 13.1659634 0.8160672 10.2115713 13.7505881 9.3610015 9.9325890 10.1658712 9.2240130 6.0890553 NA 13.7215169 7.4694790 2.1379625 7.6255372 NA 6.3655018 10.4577879 10.1148635 10.6292839 11.0212195 10.2795615 9.4742486 -0.1839328 11.5050159 9.5814614 6.4837400 8.5060350 0.2310637 11.0343986 14.3698264 9.5246498 12.2673342 11.2179833 8.0222374 1.9315318 5.6404648 7.6425853 8.6864018 11.1545879 1.5530164 6.8272639 7.2727343 9.8535842 10.6716844 10.1491925 3.3603643 3.1852640 10.3513125 11.9004027 0.2310637 13.2838550 6.2754690 8.2754690 12.1245658 11.9720149 12.6282813 8.3590691 10.7002077 10.2651858 9.9684446 10.5963035 5.2644989 8.2658738 11.1577413 9.5880767 NA 10.3330503 8.7309205 -0.1839328 3.0900574 9.8009303 10.8798816 9.7224267 9.2699937 14.9248611 10.1885395 9.1794419 8.7467746 3.4010024 16.4395710 9.2617419 12.3585048 11.3201941 10.0746032 9.2548290 8.6615273 10.4901412 -0.143100 0.508220 0.529290 -0.125120 -0.109420 -0.108410 0.229310 0.063223 0.065656 0.022986 0.022986 0.023426 -0.170560 -0.170560 0.137910 0.137910 0.137910 0.143250 0.142670 -0.169290 -0.125970 -0.147910 0.134750 0.134750 0.141170 0.108180 0.108180 0.108180 0.311490 -0.143100 -0.143100 -0.120040 -0.125120 -0.121570 -0.108410 0.219350 0.219350 0.063223 0.065656 0.082600 0.051530 0.051530 0.038800 0.177840 0.177840 0.177840 0.142560 -0.170560 -0.170560 0.145190 0.137910 0.143250 0.142670 0.123290 -0.169290 -0.125970 -0.139490 -0.337560 0.134750 0.134750 -0.443720 0.108180 0.108180 0.315940 0.161900 -0.049559 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 7.9725416 12.3839140 4.0384274 9.7363901 1.2702299 10.1477006 0.5529672 -1.7690592 8.5371365 8.5530029 NA 7.8409554 2.5529918 10.1702865 9.2225964 -0.1839328 7.4405279 10.2029774 12.3506643 10.2471865 9.7886055 8.3395993 12.3433512 2.0384362 9.9842914 9.4742486 2.8749346 3.9315129 11.0303563 3.7546417 12.9645137 12.3358372 9.5467903 10.3940953 7.6425853 9.4022515 2.0384362 0.5529672 -0.1839328 -0.7688134 8.7856637 10.2730759 10.2436992 5.3291057 6.7959864 6.1968588 10.5513112 6.8604315 10.1610728 0.8160672 12.7487441 2.6905065 6.0702777 9.8032017 5.2585378 0.2310637 9.4060004 8.8676994 7.2169165 NA 13.9151384 1.5530164 10.5147419 -1.7690592 8.7169038 7.5210932 8.2282540 9.0536455 13.148611 6.173589 8.366784 13.475104 10.116008 11.231603 13.165963 12.014380 9.246406 10.531141 13.068604 8.193971 8.686402 9.005862 NA 7.588627 11.880443 10.949179 7.804722 9.003389 8.839329 8.439309 9.975492 4.972541 6.945320 10.831220 6.627680 2.401002 6.012435 6.081887 11.023458 10.314222 8.419664 8.656290 12.349286 3.958991 10.629284 10.384310 11.772292 10.028331 10.664399 9.320525 -1.769059 9.652282 8.379793 3.038436 10.671684 7.553003 10.402564 10.351313 6.750711 12.969642 10.195054 10.991795 13.044906 9.722427 9.875832 1.816026 TCGA-B6-A1KN 57 0 NA 4233 breast stage iiib t4b n1 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 24 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 2 2 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 1.140267e-06 1.946798e-07 12.1201612 6.4549901 6.5964104 10.6820827 0.8063653 10.5197199 NA 10.5794726 11.6404093 10.5006912 10.5410430 7.3912960 8.2409616 10.0692113 6.1461827 9.4000358 9.4477831 10.4127386 7.1432118 3.0793440 10.0629352 9.0518862 14.4652700 10.5427353 9.2718997 11.2098781 4.9762582 9.8091390 NA 3.6136849 8.4074853 11.8216323 12.9174691 6.9829217 16.8910760 12.9207807 8.1986508 5.7836138 2.3088268 6.9895557 8.9895552 6.0415496 7.1040137 12.8090898 -1.7784322 9.3094966 13.8678733 2.7449361 9.1791985 11.6315572 5.7051872 7.6910127 3.4308205 14.3154632 7.2874603 2.3088268 6.6971038 -0.7786797 4.4111957 10.3500096 10.4311288 9.6179756 10.9078714 9.7410071 9.2800390 -0.7786797 12.0363538 9.9833375 3.5789266 6.8688287 NA 9.7400241 13.9670189 8.9381131 11.1114451 12.0581116 8.4259422 NA 5.0027295 6.3660284 9.5871465 11.6865546 -1.7784322 5.3194012 6.7721179 11.0705805 10.8966664 4.8360807 5.9492921 3.8360857 10.6694872 11.8640995 3.9492921 14.0998290 5.2657632 7.8813667 11.6982436 13.0782827 12.8869844 6.2820672 10.4769897 11.4811141 11.1019148 10.8056288 4.2874575 8.4025231 11.9819869 11.2611467 -0.1936347 10.2867870 9.9556572 1.3912728 3.5222316 9.2602899 11.1624185 10.1799236 10.3461384 15.4454385 9.9624164 10.4277748 8.6297005 2.8652260 15.8182449 9.1342602 12.8567489 11.3217047 9.8764543 8.9670452 8.8670294 10.4867867 -0.598530 0.995780 0.057842 0.054279 0.062698 -0.058284 0.045895 -0.047893 -0.614760 3.656900 1.702300 2.082700 -0.255360 -0.255360 -0.200330 -0.200330 -0.200330 -0.598050 0.050296 -0.517630 0.148950 0.084256 -0.574910 3.656900 -0.223510 -0.508120 -0.208920 -0.208920 0.316320 -0.575540 -0.598530 -0.185840 0.054279 -0.058284 0.047873 0.050012 0.050012 0.138250 -0.614760 -0.614760 -0.605230 0.060268 -0.618020 0.068998 0.068998 0.068998 0.068998 -0.255360 -0.255360 -0.261390 -0.284500 -0.570780 0.050296 0.050296 -0.512150 -0.596110 0.041752 0.077177 -0.573050 -0.223510 0.000000 -0.492630 -0.208920 -0.244070 -0.245660 -0.548410 -0.255 -0.255 -0.261 -0.261 -0.598 -0.598 -0.518 0.149 0.000 0.000 0.000 -0.573 -0.573 -0.221 0.000 -0.508 -0.508 -0.576 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.583 0.000 0.000 0.000 -0.417 -0.255 -0.255 -0.261 -0.261 -0.598 -0.598 -0.518 0.149 0.000 0.000 0.000 -0.573 -0.573 -0.221 0.000 -0.508 -0.508 -0.576 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.583 0.000 0.000 0.000 -0.417 8.2739387 12.0884565 5.9695627 9.0917355 2.0783707 11.2079240 0.8063653 0.8063653 8.6444869 7.3736560 -1.7784322 8.3812423 0.8063653 10.5079286 8.6179758 1.0287106 7.6222503 9.9733333 11.2144862 9.4793480 9.4387954 7.5251520 10.6859166 1.3912728 7.9978039 9.2800390 2.9218171 -1.7784322 10.2050771 4.6643122 12.2206663 11.6178419 8.3467845 9.8217485 9.9787609 9.0855569 7.2465107 1.3912728 0.2213203 5.7527513 6.8616155 6.7759592 11.0880703 4.6136908 8.4019389 6.2928333 9.7566462 6.2381792 9.3596426 0.2213203 9.7021611 2.3088268 4.3088341 10.1930474 5.3194012 5.2213706 9.4603725 7.6115398 5.9148587 0.2213203 13.8454809 -0.1936347 10.6725820 NA 6.3557968 5.5789236 8.8579956 7.1784726 12.5694766 6.7912267 8.5974962 16.8910760 9.5393486 10.5404784 12.8090898 11.2331223 9.3028543 10.4642473 13.9172244 9.7566462 9.5871465 8.3390140 0.5432979 7.6007492 11.6265123 11.039554 2.806324 8.486986 9.367303 8.752752 10.990525 5.066860 8.406246 10.542735 6.651824 3.391300 7.930455 9.529061 11.009069 10.546114 8.450190 7.416128 11.854252 5.232599 9.617976 10.069211 10.784567 9.471669 11.466775 9.367303 8.927867 9.409051 7.669156 6.249277 10.896666 5.962838 10.373022 10.669487 6.959463 12.905243 9.746892 10.433259 12.487865 9.839297 10.024695 1.806324 TCGA-B6-A2IU 62 0 NA 5176 breast stage iia t2 n0 m0 2-10-2014 female 1998 NA NA infiltrating lobular carcinoma yes 0 white hispanic or latino 177.46.0 NA NA 5 2 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 2.224912e-07 10.898917 5.999610 6.196302 11.658625 2.523888 10.095630 -0.476137 9.389611 12.105078 13.467308 9.935389 8.070772 10.071736 8.608686 7.023723 9.229510 10.948044 8.841290 5.673624 1.108826 10.901630 10.564852 9.709992 8.931145 9.646706 10.647999 3.693799 10.393456 0.523863 3.693799 6.991483 10.927955 12.104843 6.305237 13.775656 14.097998 8.611340 7.529502 4.430767 7.350426 8.258587 9.409574 5.950142 13.008826 1.845791 9.982284 14.931245 4.653163 9.842601 11.293715 7.324777 9.084210 2.331247 13.267474 9.306876 1.108826 6.663429 NA 4.167735 9.827658 9.815048 10.613990 11.620263 8.911895 10.023723 8.445718 11.284182 10.376407 7.790664 8.839027 11.690668 10.825374 14.621292 5.929360 11.590639 10.631748 7.747879 1.845791 4.278765 7.708753 9.190989 13.748181 NA 5.632402 7.153234 10.157781 10.730892 4.568269 3.611338 4.881430 9.571002 11.597350 3.331232 13.188880 7.272071 7.987402 11.474798 10.865396 12.920081 7.551784 9.940675 10.155055 9.964321 10.735158 4.331232 8.457568 11.580177 12.050377 NA 10.246685 8.861499 2.331247 4.099792 10.091834 10.179408 8.681224 8.526692 15.184096 10.878678 10.214749 9.879229 NA 16.068133 9.644115 14.545161 11.404226 9.811590 9.927955 7.523878 11.226596 0.9465000 1.2234000 1.2234000 0.0066653 0.0132130 0.0204830 0.0172640 -0.0075039 -0.6628100 0.6468900 0.6468900 0.6483600 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.0149160 -0.0154660 0.0036076 -0.6564000 0.0070826 -0.0154660 -0.0570970 -0.0570970 0.5915200 -0.0633010 -0.0633010 -0.0633010 -0.0278080 -0.0522610 0.0109820 -0.0070099 -0.0123610 0.0204830 0.0243820 0.0172640 0.0061090 -0.0075039 -0.6628100 -0.6812000 0.0076520 0.0038854 0.6468900 -0.0056757 -0.0056757 -0.0056757 -0.0056757 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.6777500 0.0036076 0.0036076 -0.6652700 -0.0044385 -0.0154660 -0.6926600 -0.0476660 -0.0570970 -0.6605900 -0.0633010 -0.0633010 -0.0278080 -0.6321600 -0.0385780 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 7.850307 12.079905 6.292062 8.668536 3.523876 10.756299 1.845791 -0.476137 8.642819 7.995553 1.523863 7.272071 2.983313 10.169536 9.781265 3.523876 6.958506 9.021729 12.533881 11.155055 10.133786 7.757497 10.422479 3.331232 9.479527 10.023723 6.535104 NA 10.280434 4.047442 12.634850 11.777725 7.478074 10.861499 7.350426 9.280434 2.523888 2.108826 2.693810 8.703787 9.138587 10.057207 10.323159 5.733330 6.816751 6.600693 10.709992 5.167735 10.078466 -0.476137 10.631095 4.381858 3.845801 9.506272 5.372625 2.331247 9.690041 6.790664 6.331232 1.523863 13.578482 NA 9.794173 NA 5.589967 4.950142 7.424744 8.344057 12.228307 3.983313 8.865952 13.775656 9.315040 11.108370 13.008826 12.355581 9.017733 10.500442 13.566990 11.013224 9.190989 9.027703 1.108826 8.078466 11.561768 11.125648 6.489662 8.592656 9.631095 8.726001 10.686930 5.546246 7.153234 8.931145 6.512562 1.523863 3.845801 6.964498 8.920482 10.701297 6.872606 9.370935 12.654448 2.693810 10.613990 10.537200 10.831078 9.846932 10.793589 8.898917 -0.476137 8.628922 6.152068 3.771801 10.730892 9.938563 10.825374 9.571002 7.167734 13.399051 10.121930 10.435270 12.195198 10.634361 9.836760 0.523863 TCGA-B6-A401 47 0 NA 2596 breast stage iia t1c n1a m0 2-10-2014 female 2007 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 239.28.0 NA NA 2 5 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 11.45940216 6.68616993 7.21077361 11.23943235 0.77450245 10.12187822 NA 8.59465715 10.14690809 10.37215845 9.72692826 7.76769982 8.94740580 9.57408372 8.74141609 8.28860034 10.05153320 10.04313723 7.96232517 3.62247358 12.46106633 10.74141626 13.89950421 10.95289417 9.25587410 10.14080051 5.93636704 10.24125626 -0.54750999 3.81010373 7.63742549 11.05223064 12.35906502 7.00329640 13.42274596 12.02879828 10.94139452 6.39506451 3.81010373 6.93233052 7.81449403 10.04360493 9.83517421 12.19106471 5.34736802 12.77285713 12.67186997 7.05617598 10.76651301 10.68347128 8.72401309 6.44123447 NA 13.91846056 10.57083270 -1.54750999 7.32906707 0.03745251 2.45254272 9.40237684 9.45887616 9.40237684 11.13510592 9.84164375 10.29764815 1.45254272 11.15320664 11.33079271 6.96824976 7.46097841 10.02950686 11.44247682 14.80652399 9.20353350 10.92727012 10.75032621 8.88926180 2.35943683 3.49694802 9.18132100 8.17022653 10.63370247 NA 5.92015512 8.32906707 8.81668482 10.47457111 6.76088890 7.25021124 4.84486768 9.40529147 11.50986505 5.56107558 13.31688143 8.11432850 7.59465752 12.05536501 13.21607379 12.25789099 9.04687490 9.63245927 10.74515942 10.09167828 10.62247514 4.09640524 9.09820872 11.45554094 10.56986861 -0.54750999 10.67413726 9.45395827 2.45254272 3.99944085 9.36618756 11.40328828 9.71523240 9.58825946 14.68157548 10.76628350 8.95736908 9.11076177 2.70048411 15.33834186 9.80514539 14.22491630 12.80913970 9.82976063 9.48803653 8.14603707 10.77696420 0.00000000 0.84396000 0.83879000 0.18768000 0.18768000 -0.21181000 -0.00133790 -0.12499000 -0.12499000 3.65690000 0.31418000 0.57117000 -0.01032900 0.00013863 0.02272500 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.21392000 0.10701000 -0.00138580 0.21253000 0.21253000 0.21253000 0.21345000 0.21345000 0.21345000 0.37101000 -0.04197400 0.00000000 -0.02027500 0.18768000 -0.21181000 -0.21181000 -0.00580060 -0.00249380 -0.12499000 -0.12499000 -0.12499000 0.41451000 0.53204000 -0.34905000 -0.28258000 -0.28258000 -0.28258000 -0.30511000 0.00013863 0.00013863 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.05037000 -0.21392000 0.10701000 -0.00138580 0.13007000 0.21253000 0.21253000 0.15621000 0.21345000 0.21345000 0.32840000 0.14890000 -0.02794500 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 9.0690990 13.6375417 7.9242252 10.4602782 4.5359783 10.0214563 5.1249774 -1.5475100 9.1973841 7.9444034 -1.5475100 6.7699634 8.2550663 9.9479056 10.0008904 5.0964052 7.9303086 9.4276816 8.8777660 11.3050797 8.9992517 7.3473680 10.9586098 1.7744603 9.8523621 10.2976481 4.5610756 NA 10.9206650 3.5400149 13.2277489 12.3748558 7.3229151 9.0791719 8.2917541 10.4415898 7.2917536 2.1529946 0.4525954 8.6680833 9.7081690 10.3256097 9.3397707 5.0375140 10.9876116 9.0800841 10.4351873 6.3042993 9.5479472 0.4525954 10.1948596 3.4969480 4.6423723 10.0096787 7.9833858 6.3167359 9.7298376 7.3443341 7.3503956 5.1667958 13.4510084 NA 10.9045339 -1.5475100 8.6111598 4.9761116 7.9303086 8.8001716 12.1658798 6.7699634 8.1285074 13.4227460 9.7834670 11.2406567 12.1910647 11.4947225 9.1354043 9.8824800 12.9793550 11.0589554 8.1702265 8.8996334 0.7745024 7.1460371 11.6312150 10.633702 5.911982 8.759751 8.979049 8.182171 9.323901 7.740262 8.757472 10.952894 7.291754 1.037523 8.108975 8.025137 10.936870 9.914030 8.082945 9.561075 10.414362 6.207438 9.402377 10.150387 11.168083 10.436613 9.929803 8.197384 4.642372 9.603605 6.429830 7.081906 10.474571 7.316736 11.000890 9.405291 6.627476 13.691179 10.093699 10.078259 12.875009 11.765858 9.124091 1.037523 TCGA-B6-A402 47 0 NA 1651 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 239.28.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 9.17776e-07 3.059253e-07 12.0123502 -1.2951280 5.8946892 10.8577833 -1.2951280 9.6348628 NA 8.4480163 11.2625678 9.3834650 10.0341006 8.1785707 8.3232503 10.4496986 8.3702005 8.2478967 9.9185766 10.2464454 10.0063610 1.7048720 11.3626298 13.2504326 12.7086462 10.7482339 9.6319019 10.2987227 3.9527902 10.9830151 NA 3.7923244 5.5503559 8.9300723 12.7953080 7.3983521 12.2226571 12.4648569 9.0346612 7.2047110 2.4053117 8.5628457 9.0447149 9.5081888 5.7382869 1.7048720 0.2898345 12.8919848 5.6590597 11.2879475 9.3116493 10.8065122 6.2898271 5.5122206 NA 14.2389712 9.7451545 0.7048720 9.6857184 NA 2.7923348 7.6561495 10.0463836 8.8797903 9.2323418 9.8716555 10.2469293 4.1967172 11.4744960 12.6813394 5.5752306 7.0222779 2.0268001 8.2146397 14.9353543 7.7495591 10.2454771 10.0262292 11.0901879 2.7048720 1.2898345 9.2284267 8.7976220 8.9994854 -0.2951280 4.9527902 7.3451098 10.5017156 10.2176052 4.0267912 4.8747920 4.4862252 10.1211345 11.7372549 1.8747970 13.1377328 2.8747970 6.4530582 11.1038756 15.1480673 12.6170992 8.0335397 10.8965409 11.0080747 10.6282814 11.8399327 4.0130245 8.6807125 12.0744621 11.6291206 -1.2951280 9.7020442 9.6311607 4.3487211 4.2904318 9.8647360 8.3541211 9.7923276 9.3799397 13.9228982 10.9228225 10.7031026 7.8922168 3.2284339 12.2002202 6.7327712 12.4051961 11.4423234 9.6132574 9.8885002 7.4730490 10.4309637 0.919250 1.588500 1.607000 -0.096272 0.071391 -0.514550 0.074265 0.344370 0.398860 -0.704940 0.263410 2.564000 0.585450 -0.374590 -0.603610 -0.130120 -0.130120 0.113060 -0.214780 -0.055634 0.381980 -0.122000 -0.403620 0.182070 0.795290 3.656900 1.097500 -0.353390 1.151600 0.213300 -0.387160 0.119340 -0.096361 -0.321820 -0.547740 -0.653420 -0.653420 0.344370 0.411510 0.407270 -0.640290 0.424090 -0.735330 -0.093667 -0.093667 -0.433870 -0.433870 -0.374590 -0.405180 -0.603610 -0.122260 0.113060 -0.214780 -0.214780 -0.055634 0.109060 -0.135020 -0.228590 -0.403620 0.182070 -0.368950 -0.432570 -0.863500 0.402770 1.156400 0.379240 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.324 -0.324 0.000 1.607 0.124 0.124 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.324 -0.324 0.000 1.607 0.124 0.124 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 6.5813814 12.4916449 2.6117626 10.2401402 2.2409249 11.0046451 -0.2951280 1.8747970 9.7513067 9.1967179 4.6821463 8.6147577 0.7048720 10.3869815 9.8140425 3.7492554 3.7048609 11.4526382 5.2594533 9.6677607 9.2856510 6.9948840 10.9719440 -0.2951280 9.0502699 10.2469293 3.0268001 NA 11.2851233 3.4597464 13.3484955 12.4034609 5.4730498 9.9616631 8.6459124 9.0950338 0.7048720 2.1643036 0.7048720 4.3487211 8.2709190 10.1211345 8.7976220 1.2898345 8.8764795 8.1078767 10.2454771 4.8747920 11.0646143 3.4597464 12.1244300 2.1643036 4.5628469 10.1909053 6.8072081 3.9527902 8.0357817 6.5752291 5.5996838 8.5250439 14.0054676 0.2898345 10.2737709 1.2898345 9.5440686 7.0491602 7.4122235 7.0222779 13.328885 7.862211 7.713294 12.222657 9.747235 11.628007 1.704872 11.305939 8.842983 10.092882 13.814614 12.666767 8.797622 8.949229 4.813391 8.245961 11.215876 9.942672 5.079903 8.178571 9.413086 9.313120 9.636415 4.164296 3.228434 10.748234 5.813389 NA 9.607240 9.017010 12.113194 9.004073 8.542493 8.844416 5.813389 4.682146 8.879790 10.501716 13.108143 11.987374 10.151948 8.099327 NA 9.324755 6.035782 4.537756 10.217605 7.058011 10.393884 10.121134 8.236246 13.943046 10.966666 10.596648 12.186412 11.421256 9.277565 1.289834 TCGA-B6-A408 55 0 NA 1519 breast stage iiic t2 n3a m0 2-10-2014 female 2008 NA yes mixed histology (please specify) yes 10 black or african american not hispanic or latino 255.29.0 NA NA 1 2 NA NA 1 2 3 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 3.337367e-07 11.13846169 5.45431739 7.47437358 11.50847010 -1.51127935 10.31508048 -0.51148499 9.46652741 11.89898332 9.15297915 9.37727518 7.56267364 9.42884546 9.80368152 8.38183362 9.18723650 11.10806420 9.21560143 7.00028513 4.94796532 11.73986641 10.25008318 12.46276727 12.08518764 9.23840140 10.27602644 7.77393437 10.07067389 -0.51148499 6.39542274 7.77393437 11.01503119 13.34884302 7.28619363 12.96071508 12.96742795 10.03011257 5.74592033 3.24342536 7.44853429 8.55462108 6.68820414 6.87654887 12.85225608 3.48852786 10.31904716 14.32030927 6.91479650 9.73730160 10.59149187 7.13958409 7.11424103 1.29589931 15.57197514 10.28619352 2.94796532 8.90954482 0.81048423 5.46581125 9.93251153 9.70830555 8.81944881 10.70163621 9.48076213 9.89686170 1.48851501 11.15186769 10.36274493 8.66595160 7.57334044 1.07347751 11.64160893 14.51702082 8.23539870 10.46330499 10.37193898 8.77624450 3.44273122 1.07347751 8.74709800 8.29427566 10.05315778 0.07354606 5.02768930 7.85047566 9.14316788 10.36619958 6.30871035 6.90216043 5.51089864 8.96020731 11.74104958 2.18897055 13.45400062 8.69065594 7.65845715 10.47295042 13.31899765 12.47197096 7.88727546 11.01698604 10.56601531 10.80035118 11.14495682 5.07349465 10.89526846 13.26424511 11.98176198 0.48851501 10.85074974 8.97637194 0.81048423 5.24475389 9.33166782 10.26660912 8.80594471 9.39166055 14.70892918 10.58161939 9.31189927 9.53769987 8.26002142 14.63970710 6.64840360 12.11229917 11.22451099 9.89845326 10.19113758 7.93561532 10.44499166 0.24747 0.22905 0.27505 0.27143 0.26279 -0.14541 0.29565 0.28074 -0.15944 3.65690 2.41040 0.61498 -0.13820 -0.13820 0.27583 0.27583 0.27082 0.34534 3.65690 -0.98264 0.26467 -0.13225 -0.53642 -0.12004 -0.12004 -0.10880 -0.10880 -0.10880 0.31113 0.24747 0.22905 -0.13070 0.27111 -0.14541 0.27553 0.29565 0.29565 0.28074 -0.15579 -0.11796 -0.13393 -0.13393 -0.98815 -0.97693 -0.96767 -0.13225 -0.13225 -0.13820 -0.11273 -0.55547 0.27082 0.28305 -0.55436 -0.54118 -0.96078 0.26467 0.30234 -0.55216 -0.53642 -0.12004 0.28723 -0.10880 -0.10880 0.31113 -0.12291 -0.54898 -0.138 -0.138 0.271 0.271 0.279 3.657 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 -0.138 -0.138 0.271 0.271 0.279 3.657 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 9.62680378 13.22128237 7.72932300 9.93768057 4.27460459 11.36005223 3.13239588 1.07347751 9.03156365 9.38562107 -0.51148499 6.77855028 4.39541932 9.64903374 9.75590388 3.69798505 7.26660947 8.50534037 7.36197622 11.11401252 9.38530333 7.65594997 11.21538872 3.13239588 9.61006551 9.89686170 3.53292782 -1.51127935 10.73734901 3.13239588 12.55772996 11.98176198 7.46294636 9.90901850 11.83504568 9.17765648 3.57598995 2.18897055 NA 10.97259961 9.22408804 10.62840298 9.86953401 0.48851501 8.55408267 7.83060647 9.84773248 3.91479411 9.22069948 NA 11.46670613 3.88085202 4.82838278 9.51771564 6.77305479 8.16095749 10.23672484 8.63954837 10.07724660 0.07354606 13.74433509 NA 10.56835005 NA 8.65594997 4.86357178 8.29588692 8.02769096 14.458046 4.160961 8.243420 12.960715 9.164489 10.306315 12.852256 11.825736 9.210955 10.701940 12.765311 9.572676 8.294276 7.992358 1.295899 6.927324 11.097942 10.8743944 5.1178903 9.0002846 8.8947368 7.9105966 10.6528984 8.0621789 8.2974959 12.0851876 7.6955464 0.8104842 6.7125339 8.4530751 9.9973171 10.7605785 9.3174617 9.1609572 10.4196387 8.4643799 8.8194488 11.2870038 11.2432107 10.3806953 10.1436154 8.3198392 NA 9.7607943 6.9021604 9.0659608 10.3661996 6.9273240 11.0305965 8.9602073 7.4014214 13.9465220 10.5816194 10.4133444 12.2719395 10.9497556 9.5700154 3.6979850 TCGA-B6-A40B 76 0 NA 3152 breast stage i t1b n0 (i-) m0 2-10-2014 female 2005 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 239.28.0 NA NA 3 3 NA NA 1 2 2 4 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-06 2.503025e-07 10.6227134 4.5258496 7.4877838 11.5630937 NA 9.3130288 -1.6438562 8.7811426 10.6528431 11.4432239 9.8532798 7.2355098 8.3685514 10.0563666 7.3782949 8.5333465 9.9408894 9.4513238 6.6085919 0.6778916 10.6739047 11.1030709 9.2918285 12.0557162 8.1808858 10.0101153 5.3332055 9.6935488 -1.6438562 6.6868437 7.0872454 10.5546788 11.7145780 6.7439444 13.5725969 12.5889473 10.3513407 7.7024408 4.4852078 6.3671544 8.0701725 9.8612422 7.9816358 13.1212648 2.6778465 10.2480902 13.9629970 6.5408022 10.1566528 10.5955254 8.1224558 8.2170135 0.3559184 14.3382605 11.0329219 0.3559184 7.7266140 NA 3.5258559 9.5401823 10.4549458 10.1103968 10.6308873 9.3072115 10.0011350 1.9408809 10.5220899 10.7417893 7.2293707 8.3755178 1.9408809 10.6929912 14.6796677 6.7641723 10.3431908 9.9618693 8.1340037 2.3559184 2.2628240 8.6585657 7.3559272 10.2158498 -0.6440816 4.6227137 7.6250535 9.4460393 10.4159472 9.2665697 5.0563668 4.2139071 9.7079702 11.5272600 4.7482465 13.8371902 7.4618355 7.8834039 12.2897097 13.8254415 12.1547024 8.5308526 10.5574382 10.5414218 10.3123321 9.6924335 3.4433945 9.3671541 11.2646948 11.5887974 -0.6440816 10.5549856 8.3144795 2.9408809 4.8638790 8.2278320 11.2868489 9.6150817 8.3057535 15.7213608 10.1907929 8.5907442 8.6062253 1.9408809 15.3650994 10.1199690 13.6041509 13.2082125 9.7905551 9.5763052 7.8814474 10.3069092 -0.5317100 0.6511200 0.6511200 -0.0417020 -0.0538810 -0.1431600 0.4277200 0.0713460 0.0655300 0.0744080 0.0744080 0.0744080 0.0725400 0.1028300 0.0793560 2.8256000 0.7059500 0.0716780 0.0666900 -0.0506410 0.0799780 0.0988510 -0.0019399 -0.0019399 -0.0111980 0.0995790 0.0995790 0.0995790 0.1006000 -0.4986000 -0.5317100 -0.0518940 -0.0417020 -0.0964400 -0.1431600 0.4277200 0.4277200 0.0801680 0.0744080 0.0655300 -0.0422450 -0.0422450 0.0744080 -0.0353120 -0.0353120 -0.0353120 -0.0353120 0.0884030 0.0884030 0.0873900 -0.5360200 0.0716780 0.0666900 0.1010300 -0.0671900 0.0799780 0.0988510 -0.5185600 -0.0019399 -0.0019399 -0.0384710 0.0995790 0.0995790 0.1006000 0.0698120 -0.4967300 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.05983060 14.41755118 7.60385404 10.44703155 1.94088087 11.76757022 1.16330550 0.35591837 8.96325707 8.87457998 -0.64408163 7.33638070 3.64132637 9.94978484 9.81074015 4.79886964 6.68235699 8.98619389 11.55697864 11.08320918 9.28207464 6.68684365 11.00585658 1.16330550 9.34532141 10.00113497 5.83165940 NA 10.66824263 1.35591837 12.22417066 11.86866732 8.12411097 9.61978292 7.40032103 9.87997879 3.56537783 1.81537049 -1.64385619 11.97224594 9.69131728 9.98801331 9.78742447 3.60385775 8.96080446 9.36994735 10.18881691 6.46445100 9.57024603 NA 11.52020531 2.87949013 3.99978358 9.29696712 7.21971064 3.48520783 10.73340849 6.75680581 7.45132405 8.08044075 13.99555018 -0.64408163 10.29880779 -0.05904398 8.53956209 4.48520783 7.62036940 8.91147468 13.395537 5.632050 8.147090 13.572597 9.932817 11.026804 13.121265 10.018150 9.478755 9.768497 14.176505 12.827539 7.355927 9.818429 1.163306 6.765317 11.095497 11.41932193 6.73096595 8.74286720 9.05463145 7.93524286 10.39239589 6.38383214 5.17610731 12.05571616 7.25074466 2.60385775 6.74824385 7.19805700 9.61272514 10.33749413 7.13400423 9.84627642 9.37898818 5.78219099 10.11039678 10.82836382 11.18782786 10.00921979 10.07403158 6.92198133 NA 9.20357926 7.84348582 6.38934998 10.41594717 7.33034148 10.76664319 9.70797025 6.51579759 13.36920590 9.67333947 9.68347944 12.95071796 11.27087252 9.09991978 -0.05904398 TCGA-B6-A40C 51 0 NA 1673 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2005 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 239.28.0 NA NA 2 3 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.503025e-07 10.7325643 7.0441722 5.7192409 11.7732806 0.7192273 9.9119454 0.4561753 9.2276966 11.0688914 10.7522057 9.7323316 7.1841275 8.2493226 9.8459460 6.6460316 9.0456712 10.8297249 9.2164282 7.2687057 1.9416322 12.1772209 11.0533286 11.3237948 8.4896300 9.4437554 9.8962458 6.3290357 10.1773064 NA -1.8656476 7.8570865 11.4642156 12.5253213 8.2243915 13.1816587 12.8194111 10.2506230 5.8416386 2.8347112 7.7003329 8.7173618 8.9049428 7.5415466 12.2377308 1.3042190 10.9797691 14.6042229 5.7341921 10.4916111 10.0602044 7.8757463 7.1342795 -0.2806851 14.2361458 11.4658497 2.8891620 9.0598336 -1.8656476 3.8067056 9.3684977 10.2160954 9.4796843 10.6761017 9.1773064 9.8660224 0.1342209 10.5410156 10.9006010 8.1538697 8.5298131 8.8347188 10.3910775 15.1083015 8.3989211 10.9466570 10.2074164 6.6965211 2.8347112 6.9608279 8.5751482 8.1621849 10.6400906 -1.8656476 5.4830064 8.4962230 9.2783001 10.4508435 8.1621849 6.1895617 4.6578400 10.2000317 11.5764451 4.0650122 13.5395203 6.9891470 7.1566474 11.4792685 13.6045884 12.3669998 8.8433630 11.0688914 10.6087456 10.4905384 10.9693426 4.5265947 9.5314189 10.8491685 11.4458855 -0.8656476 10.4609895 9.1286326 1.3042190 5.0456133 8.6371110 11.1971685 9.8493830 8.7416096 14.5955667 10.5761858 9.4225684 8.6221192 4.8485228 13.5399524 7.7154795 12.2986361 11.5997179 9.9160486 9.8630500 7.9496622 10.8771780 0.97807000 1.39070000 1.40360000 -0.00266380 -0.01962100 -0.00473940 -0.00598370 0.66619000 -0.71339000 -0.01122900 -0.66191000 0.64648000 0.01606200 0.01606200 0.00191010 0.00191010 0.00191010 -0.01005900 -0.01005900 0.00844260 0.01137400 -0.66635000 0.02690300 0.02690300 0.02690300 0.06850800 0.07955800 0.07955800 0.02479700 0.05092900 0.00010706 0.01849100 -0.00266380 -0.00473940 -0.01736600 -0.00598370 -0.00598370 0.66619000 -0.71339000 -0.71339000 0.05662300 0.04638400 -0.69389000 0.00621640 0.00621640 0.00621640 0.00621640 0.01606200 0.02255300 0.00000000 0.00191010 -0.01005900 0.00274290 0.00274290 -0.00881470 0.01137400 -0.66635000 -0.66931000 0.02690300 0.02690300 0.02143100 0.06850800 0.07955800 0.02479700 0.01304200 -0.65847000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 8.6859874 14.1492367 8.9392169 9.9416340 1.6325474 11.0888390 2.8891620 0.1342209 9.5885784 8.8782720 1.1342867 8.3828708 4.1786748 9.8031641 9.8929187 5.4471626 7.5436699 9.1779900 6.8858233 11.1040254 9.5050481 7.3558664 11.5525270 3.4196872 9.6666350 9.8660224 3.9922609 NA 11.0605751 3.7192382 12.6832214 12.0958192 7.4918315 10.0130964 8.6984286 9.6361163 5.1342784 0.7192273 -1.8656476 7.3582811 8.9303187 9.9934256 10.1649463 5.3822073 8.3968321 8.7763307 10.6445488 8.4173673 9.6170870 NA 11.2512728 3.3822107 4.0650122 9.4041947 6.5923165 5.3141890 10.0138624 7.1058226 7.6984283 -0.2806851 13.4575802 0.1342209 10.2528958 -0.2806851 8.8621997 4.6734377 7.4674344 8.4208369 11.143333 5.979769 8.379832 13.181659 10.016735 11.030801 12.237731 10.463515 8.924416 10.063907 13.028434 11.135863 8.162185 8.050158 2.834711 7.591660 10.168390 11.2757476 7.5244477 8.7853308 9.1335746 8.8908355 10.5345208 7.7889154 6.5937108 8.4896300 7.0441722 -0.2806851 5.8757457 7.6708956 10.1325170 9.7695438 7.9221818 10.0260628 9.3570740 6.3241031 9.4796843 10.5665600 10.6573510 11.1293396 10.6208628 8.1868472 NA 9.7492282 6.4741294 6.3630975 10.4508435 7.3869446 11.2640451 10.2000317 7.5438400 13.9720302 10.1545646 10.2969851 12.3552619 11.4609895 10.2286867 2.1342867 TCGA-BH-A0AU 45 0 NA 746 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 3 2 1 2 3 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 12.4343017 7.3155662 5.7224059 11.8373504 1.4370146 10.1779097 0.8520788 9.7513991 12.3503927 7.4104632 10.1374443 7.9341909 9.3843980 8.7709053 6.3677415 8.8336093 10.4242687 9.8583682 7.4027887 3.4958998 10.3533817 9.3989367 13.6229641 11.0742333 8.9328596 10.5637091 6.7037915 10.8906182 -0.1480012 1.8520388 8.4795762 11.4263991 11.9193084 9.0455675 13.3260015 13.4962364 8.3458975 7.4850371 5.4066319 9.3408865 8.8250220 8.0443351 7.9992469 12.4785497 1.1739589 9.7208646 13.4285265 4.2443619 9.3001585 11.8592446 8.9301930 8.0736291 -0.1480012 13.3176704 8.9208203 3.3114741 7.8576669 NA 4.4066319 10.1941167 10.8385952 10.7619352 9.9566409 9.8909611 9.6366770 2.6593994 11.7164217 10.4472996 5.6849309 7.6035863 2.9395087 10.9001884 14.7229847 9.3877938 12.3804962 12.1446513 8.6754095 0.8520788 5.7100239 9.2507859 9.6553660 10.5044390 NA 4.7589321 7.4332424 9.5850574 11.4947707 5.8407276 6.4740937 5.3912006 10.3608272 11.6196059 3.0219594 13.1828190 4.5799645 6.8235851 12.3221925 13.0441037 12.7253901 9.1694548 10.0350571 11.1663421 10.3247330 11.3677420 5.3438946 8.6513237 12.1779097 12.0017892 NA 10.5926661 9.1141369 1.1739589 3.4423995 9.3834235 10.0999696 10.3408865 9.8271736 14.9931314 10.6448324 11.3573575 8.0144334 2.1739589 15.5411392 9.9683861 12.6991974 11.3158219 10.6845366 9.0467991 8.0832634 10.7885254 -0.355330 0.539420 0.539420 0.267340 0.249650 0.256210 0.418980 -0.377970 -0.377970 0.481310 -0.159110 0.735680 -0.381230 0.208700 0.257150 0.257150 -0.376170 0.252150 0.252150 -0.046312 -0.364080 0.214530 0.264980 0.264980 0.264980 0.242640 0.242640 0.242640 0.875470 -0.070882 -0.355330 -0.063435 -0.385600 0.256210 0.246400 -0.370080 -0.370080 -0.377970 -0.377970 -0.377970 0.256210 0.236010 0.481310 -0.377970 -0.377970 -0.377970 -0.377970 0.208700 0.208700 0.257150 -0.376170 0.252150 0.252150 0.252150 -0.046312 -0.364080 -0.369400 -0.767240 0.264980 0.264980 -0.047124 -0.409920 0.242640 0.266710 -0.347900 0.256210 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 9.4037504 13.8515137 9.9408304 9.7596840 4.6365434 10.0778521 1.4370146 -1.1478413 8.4085480 8.2073931 3.3114741 8.0772734 3.8964366 10.4745515 9.2783068 3.4370013 8.7768548 9.9683861 10.3741332 9.9295255 10.1474610 8.1489585 9.4986009 1.8520388 8.6943924 9.6366770 3.2443543 -0.1480012 10.9599131 4.0219682 11.8196286 12.3973686 8.2635533 9.4602970 8.6880926 9.6545585 5.3912006 0.4370146 0.8520788 5.7100239 10.2741068 9.5084671 9.6448324 5.0614954 9.3496943 5.4813991 10.0331943 6.2529208 9.9181313 NA 10.4931907 3.3114741 3.4370013 9.8827506 6.7863232 5.6334021 8.6912459 8.0712108 10.3746236 3.0219594 13.1655629 0.4370146 10.5275581 NA 7.6690261 4.7827807 8.5191538 9.1409082 14.074168 7.041867 9.481399 13.326001 9.944443 10.938510 12.478550 12.977859 8.719321 11.175941 13.184428 10.512038 9.655366 8.233585 2.173959 7.402789 11.692820 11.079959 7.764931 8.284584 8.928858 9.531522 9.632803 6.659397 5.041865 11.074233 6.235746 5.939504 5.311474 7.225952 11.129911 9.881329 9.974223 9.456595 12.474208 6.991593 10.761935 10.138022 10.921156 9.367742 10.521813 9.094025 2.552475 8.752864 7.089108 7.031951 11.494771 8.272002 10.166059 10.360827 7.367742 12.581663 10.091641 9.840727 12.947934 10.144364 9.341890 1.659377 TCGA-BH-A0AV 52 0 NA 1180 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 black or african american NA 85.58.0 4 4 4 NA 3 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456992e-06 5.550446e-07 11.6355665 4.8006980 7.4256565 10.5703144 NA 9.6765469 0.4256741 9.7197025 11.7714773 7.1156544 9.3622941 7.7408055 8.2330113 10.6747697 5.9492174 9.1286947 8.0218461 10.1569752 9.2703619 1.4256741 8.6830441 11.4424645 12.5287801 11.5985525 10.6774345 10.3238797 4.9648145 10.2561714 6.8435091 2.1260808 9.8392841 11.5586379 11.7836206 8.8592416 11.7840327 11.9715860 11.7217121 5.7017819 2.0106366 8.4157604 8.2281727 11.0087390 8.3460093 6.1872075 NA 12.4200097 6.1399012 9.2632842 9.3452644 11.3499120 8.4971185 5.7202757 -1.5743259 13.1478586 8.4887950 3.3798566 7.9840772 2.8850862 6.0550134 9.3332980 10.6033872 9.4910724 9.3740235 10.6789129 10.2462341 -0.5743259 10.5273037 10.2245331 3.9175081 7.6520684 -1.5743259 7.3856580 15.7326435 8.6487530 10.8958067 11.0325241 9.3578711 2.7475807 NA 9.5164303 9.5523607 10.2797454 -0.5743259 7.5131188 6.6735833 11.6414926 11.2958283 6.4700504 6.6640604 5.6448254 8.8602844 11.9200118 -0.5743259 14.5821936 3.7110543 6.9802447 12.9133707 12.5333637 12.9636632 7.9054363 11.2059909 11.5750859 11.3807140 11.3424687 5.3798531 7.6877508 11.5510697 10.0185803 -1.5743259 10.6715060 10.2526019 2.0106366 2.7533478 10.0362198 11.9743578 10.6944907 9.0954271 15.0755018 10.6499595 10.3925221 5.8350474 4.1805457 12.1164181 5.9648145 13.0493092 12.2887778 10.3117338 10.0918803 8.0087390 10.8211529 0.0421660 1.6943000 0.4971800 0.1580100 -0.4589600 -0.5071200 1.3088000 1.1744000 0.2477800 -0.4915200 -0.4915200 0.3952900 0.0793350 -0.4640800 -0.4822900 0.1647500 0.4243500 0.9750200 -0.4884800 0.1713600 -0.0062286 0.6862600 -0.4430700 -0.4430700 0.0784380 -0.4336600 0.0406090 0.0715350 -0.4901600 -0.4740600 0.0515300 -0.4692900 0.1659300 -0.0069195 -0.5306300 -0.5153200 -0.5153200 0.5480600 0.2477800 -0.0084385 0.7124600 -0.4928700 -1.2208000 0.4775300 0.0022193 0.0022193 0.0434400 -0.4640800 -0.1773000 -0.4822900 -0.4970500 1.0038000 -0.4884800 -0.4884800 -0.4969500 -0.4404800 -0.5187700 0.8354900 -0.4848900 -0.4430700 -0.0478010 -0.4336600 -0.4377800 -0.4780200 0.3800600 0.0214630 0.000 -0.124 -0.482 0.000 0.853 -0.488 -0.502 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 0.000 0.000 -0.124 -0.482 0.000 0.853 -0.488 -0.502 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 0.000 8.5842658 14.7490101 4.1260973 10.1347401 2.9492174 12.7165391 -0.5743259 7.4535620 7.7743845 9.4514879 9.3482406 10.2916253 5.0106187 10.6384565 8.6544749 4.3325504 7.2522046 9.9084642 6.9452928 9.0124960 9.9930801 7.9802453 11.7264378 1.4256741 7.1535764 10.2462341 9.2289803 -1.5743259 10.2135588 1.8851058 12.5865519 12.1527258 8.4480242 10.4710746 9.2086545 9.5523607 5.6154810 3.4256607 NA 0.4256741 7.5471899 7.6302271 7.2135592 8.2695774 8.3495334 5.5236874 9.3362990 6.2200726 9.8524451 2.1260808 11.0858750 3.8850862 3.4700552 9.1050749 7.7379720 5.2330099 9.6777302 7.9725508 6.6055654 3.0695131 13.6638744 -0.5743259 10.1909423 NA 9.0820812 4.1260973 8.5918193 7.9648150 11.271577 7.781008 7.854016 11.784033 10.174268 10.924256 6.187208 12.772031 10.044501 12.433297 14.223571 11.090326 9.552361 8.400071 1.010637 9.424952 10.781833 11.61918161 4.35639034 9.48025381 8.44802418 5.88508867 10.51764695 5.47005198 3.71105432 11.59855247 10.08698898 0.74760223 8.26012730 9.56755895 13.82393232 10.73171792 7.90341432 7.95508667 10.10821197 5.60556545 9.49107243 9.90745569 12.26397382 11.50813798 11.09830256 9.56072412 NA 9.46433520 8.95508667 6.16036560 11.29582827 9.37110011 10.37402343 8.86028436 7.68068513 14.32539079 9.86392823 10.17217058 13.07939703 10.45321671 9.76439260 0.01063664 TCGA-BH-A0AW 56 0 NA 622 breast stage iia t1c n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 2 white NA 61.60.0 6 3 4 3 NA NA 2 6 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.226197e-06 1.17947e-06 11.5232713 5.1094358 7.3131243 11.2322845 0.7636665 9.7294447 0.1787465 9.4513278 11.4559854 6.2010653 8.8929435 7.3079813 8.2898335 9.9083188 8.8511234 9.4836197 9.4278115 10.7284826 7.6381296 5.7485525 10.3429763 10.1609785 13.9469857 9.2420930 9.3271745 10.5334983 8.8243564 9.8422560 1.7636665 0.7636665 9.3746852 10.7154309 11.9996747 7.6983345 16.9531183 12.1020255 8.7878768 5.2010653 3.0855946 5.6049638 8.1758773 6.0975602 6.5450201 11.9298235 NA 10.8856256 11.8888586 2.9860468 9.4728133 10.1744651 7.5923262 6.7786107 1.7636665 14.4995235 10.5040034 1.1786828 8.5902090 2.8791372 6.3385688 8.9302421 10.1878267 9.3881514 9.6775472 10.0697222 9.5504746 3.0855946 10.5774417 9.7888000 4.9600576 7.5838395 15.0135887 10.0327871 14.6718654 6.7335943 10.4836196 9.6154095 10.0390089 0.1787465 7.2819856 6.7178573 8.7275199 10.8821690 0.1787465 7.0795648 7.0115884 9.7869527 10.8700053 6.2976390 7.7409404 6.1559779 10.1502416 11.8509023 5.5710154 13.9780808 3.5710214 6.6864921 10.8112388 13.9981286 12.5787769 6.6625132 10.8202982 10.6039138 9.0647907 10.7966245 3.5710214 8.9600576 11.5323962 9.7664754 1.7636665 10.1072163 8.8581781 1.9860468 0.7636665 9.0475204 10.7837144 9.8216522 7.8651988 15.1953975 10.3124824 9.5667153 6.2121218 2.9860468 15.8680681 9.0413353 12.3688313 11.9258419 9.3746852 9.8938019 7.9369212 9.9668535 0.1622000 0.8467200 0.8467200 -0.0053992 0.3393400 2.0957000 0.3499000 0.3438800 0.7894800 -0.0049844 -0.0049844 0.6952100 0.2100800 0.0088920 -0.0114730 -0.0114730 -0.0114730 -0.0096806 -0.0096806 0.0000000 -0.1216100 -0.0140900 1.1516000 3.6569000 1.0806000 -0.0393940 0.2839000 0.2374800 0.9403700 0.1280000 0.1622000 -0.4065000 -0.0053992 -0.4074900 0.2449800 -0.0258010 -0.0258010 -0.0250720 -0.0538810 1.0270000 0.7750200 -0.0139530 -0.0049844 -0.3866000 -0.3711000 0.0000000 0.0000000 -0.3889500 -0.4565200 -0.1021100 -0.0041546 -0.0096806 -0.0073339 -0.0085766 -0.3563500 -0.1216100 0.0146090 -0.3682700 -0.3833600 -0.7359100 0.7296200 -0.0393940 0.2374800 0.7122700 -0.0200010 0.0213230 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.314 0.000 0.033 0.417 0.000 0.000 0.000 0.237 0.847 0.847 0.712 0.335 0.000 0.000 0.320 0.320 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.314 0.000 0.033 0.417 0.000 0.000 0.000 0.237 0.847 0.847 0.712 0.335 0.000 0.000 0.320 0.320 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 10.0506032 12.7031173 3.5006236 8.7159164 6.4824789 12.1299827 2.9860468 NA 8.9747375 8.3208051 NA 8.3183006 2.8791372 11.0218338 8.9551309 4.6381318 10.1934158 9.9575964 11.0190825 13.0366789 9.2291998 6.6943983 11.2790318 2.7636665 7.6340254 9.5504746 3.2661569 -0.8213810 12.4030012 0.7636665 13.7875880 12.7296852 8.5073729 10.3156891 8.7217298 10.4236563 2.6381202 3.2661569 NA 1.5006491 8.7786107 10.6800375 11.2591824 4.8225517 8.9312960 6.9335856 9.9567751 6.1786987 10.6899565 -0.8213810 9.5817100 3.7022586 4.4266271 10.0592535 7.3705471 7.1153361 9.7071520 9.4536585 9.9252123 5.4266271 14.2427249 1.9860468 10.8673854 NA 9.4927146 5.7485525 8.6584782 8.3905864 10.548295 6.771155 9.682524 16.953118 9.895937 11.289834 11.929824 8.680535 8.752345 10.096816 12.912561 9.058281 8.727520 8.995682 2.178683 8.175877 11.541190 10.898942 3.348629 8.818925 9.137251 6.940249 10.118813 8.206604 6.545020 9.242093 7.011588 -0.821381 8.195506 6.995938 11.634796 11.044431 7.178698 9.876534 9.961696 8.244787 9.388151 10.443141 10.606535 9.849354 10.295692 8.787877 -0.821381 9.208289 7.863481 7.882601 10.870005 7.212121 10.975549 10.150242 7.531845 14.303425 10.732327 10.777681 11.574232 10.873056 8.721730 3.500624 TCGA-BH-A0AY 62 0 NA 777 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white NA 47.68.0 8 2 5 NA 3 2 1 3 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 2.781139e-07 11.1308944 8.0923597 7.7864239 10.9344098 0.7977601 9.5188382 0.7977601 9.3864536 11.7588269 9.8421331 9.4361750 7.5856416 8.1174109 9.7240351 7.2113666 8.2775194 10.1868326 9.3045425 7.3675947 5.8638270 9.5517913 10.5222528 12.2875870 10.1414799 9.1375891 10.4202485 6.3055328 10.1541690 1.1196882 0.3827226 8.9283096 10.9455799 11.5704660 8.9127828 11.8216666 12.1111890 9.7358484 5.1727795 3.1900617 6.6369421 8.0023104 8.1706041 7.4013651 12.5672670 3.6050913 10.8328818 13.8223593 7.3330140 9.6634724 10.7508441 8.8187189 5.3368975 -1.2022399 13.9223935 9.9443077 NA 8.7151112 NA 4.6306268 9.4657376 10.1083518 9.2875870 9.4894825 9.4179588 9.5848254 4.4124496 10.6596014 9.6902818 5.5119835 7.1943442 6.0645251 10.2627952 15.0204396 6.4126698 11.0223437 9.8712111 8.0738636 0.3827226 0.7977601 6.5659231 8.3675947 10.4465459 -1.2022399 5.9576105 7.0738631 9.8339127 11.5782788 7.2855788 5.2571691 6.2323672 9.8772238 11.6149226 1.7977186 14.0378968 5.4270966 6.5592899 11.4615195 12.4283474 12.2138768 7.4013651 11.0129686 10.7562917 9.9003971 10.6095151 3.8852034 8.3232597 11.4431723 10.2905936 1.9676482 10.5492831 9.4833638 1.3827226 2.2571615 9.1814433 10.8349427 9.2386082 8.8624818 14.9256125 9.8208003 10.2749913 6.2071295 7.9166803 15.2292693 8.7850032 13.2306723 12.6499759 10.1591345 9.9023377 8.0096271 9.8360887 0.0000000 0.6286100 0.6385800 -0.0340860 -0.0439160 0.2793100 -0.0487480 0.3292200 0.2906200 1.5248000 1.5248000 2.1505000 0.3228600 0.3228600 0.3069700 0.3069700 0.3069700 -0.0212350 -0.0212350 -0.3922100 -0.0168410 -0.0015243 -0.3187900 -0.3187900 0.3713400 0.0688080 0.0421660 0.0421660 0.3721600 0.0000000 0.0000000 -0.0075380 -0.0340860 0.2793100 0.2793100 -0.0487480 -0.0487480 0.3292200 0.2906200 0.2906200 0.9403700 -0.0276710 -0.3756100 0.2921900 0.2921900 0.2921900 0.3445300 0.3228600 0.3228600 -0.3442300 0.3040900 -0.0212350 -0.0212350 -0.0212350 -0.3797700 -0.0168410 -0.0015243 -0.3298200 -0.3187900 -0.3187900 -0.0269880 -0.2887600 0.0421660 -0.0129890 0.3285000 -0.2965000 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 8.6940716 13.6986058 8.1174109 9.9819945 2.8852034 11.0202321 1.1196882 1.7977186 8.1286558 8.0923597 NA 8.5200686 3.8421341 10.4129088 8.7935061 3.9270241 9.1943437 9.2694143 10.3499277 11.3144240 9.0977024 7.1241689 11.6599889 3.4981743 8.0480372 9.5848254 3.2571766 NA 10.9270221 1.1196882 13.5943364 12.1128886 8.5119847 9.7835809 8.4325503 9.3005708 3.3826949 2.3826949 NA 6.9525572 8.3939288 10.1596828 9.5196927 6.7284770 9.4148759 8.0598338 9.8931360 6.1375896 9.4938372 NA 10.7832252 0.7977601 2.9676666 10.3082016 5.9767531 2.7046285 9.9943411 9.1932733 8.7835811 0.3827226 13.6967654 3.0456701 10.4563968 NA 9.1286558 5.9875642 7.8825477 8.6353670 12.0765224 5.0456658 8.8201068 11.8216666 9.7913851 10.7750189 12.5672670 10.8044157 9.1706041 10.1938086 13.0936514 10.5320253 8.3675947 8.3732784 0.3827226 6.8957716 10.7076321 11.454387 5.352328 8.728476 9.034949 7.728476 11.116576 6.505099 8.279539 10.141480 6.937290 2.382695 4.655718 5.574108 10.614723 10.507254 8.621106 8.432550 10.422078 5.916680 9.287587 10.550956 11.066281 10.290594 10.654943 9.235491 5.977649 9.487091 7.146467 1.967648 11.578279 7.919273 10.431188 9.877224 7.045667 14.005935 10.234971 10.351368 12.406918 10.567577 9.111756 2.382695 TCGA-BH-A0AZ 47 0 NA 867 breast stage iiia t3 n1a cm0 (i+) 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 96.50.0 2 2 2 2 3 2 3 3 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.318231e-06 4.162835e-07 11.39389660 7.73946943 6.79655103 11.05653713 2.10849100 10.30434505 -1.06130019 10.23720482 11.37554114 7.69679231 10.02934342 7.24235003 8.91870912 10.04513236 7.30051272 8.61099491 9.39184010 10.25031772 8.05231155 -0.06145073 10.11474259 10.73582558 13.26176493 9.92156293 9.25145235 10.72074856 6.97748830 10.25088509 -0.06145073 4.18650056 9.16015657 12.94778569 12.60534818 9.91226678 12.53999200 12.04415058 10.54959419 6.28729682 3.79654584 8.18174363 8.26274978 8.86486554 9.60212743 12.61771957 NA 11.69491723 14.10861180 3.98296620 9.66694916 9.87299739 9.29502134 7.66648961 NA 14.44404201 11.40030464 4.10849100 7.65966844 -0.06145073 6.12839446 9.43941121 10.12592149 10.21527538 9.24120834 9.75954602 10.52494009 4.22397079 10.37788085 9.83262929 6.45426968 8.11847861 2.84546998 9.98159668 15.15165463 8.05504323 11.31442339 11.27953218 8.71664664 2.63900057 5.34795969 8.77934739 9.21585669 11.87041493 -0.06145073 7.72320426 7.32658678 9.69011342 11.42364398 7.27395967 5.86930636 5.02603425 9.83338712 11.63727405 3.93856809 13.44065530 4.36483153 7.14314032 13.02021927 14.17428449 12.48703010 9.17458369 10.46653505 10.79031844 10.23879605 11.06913998 4.36483153 8.23548582 11.56974645 10.17338682 -1.06130019 10.51505373 9.07427877 0.52356196 3.02603868 9.41935960 10.49507542 10.27897591 8.78719246 15.22348385 10.42036881 9.39492373 8.20066422 2.84546998 15.58335515 7.97748830 13.09473150 11.79265858 9.50367152 9.88693662 8.16979074 10.14566306 0.01321300 0.35904000 0.46246000 -0.00995650 -0.00526100 0.00350010 0.01726400 -0.00360110 -0.00539920 -0.48680000 0.00819590 -0.00069303 0.00388540 0.00388540 0.00013863 0.00013863 0.00013863 -0.49329000 0.00360760 0.05281000 0.01195800 0.44715000 -0.01931400 0.37613000 0.44088000 -0.04492400 -0.04492400 -0.04577000 -0.00318590 -0.02494600 -0.46057000 -0.00193990 -0.50162000 -0.49287000 0.00350010 0.01405100 0.45292000 -0.00360110 -0.00097017 -0.00734800 0.46724000 -0.48314000 0.03242200 -0.46142000 -0.46142000 0.00000000 -0.01697900 0.00388540 0.00388540 0.00013863 -0.47455000 -0.49329000 -0.00802440 -0.00802440 -0.46203000 -0.48596000 0.01628600 -0.49225000 -0.01931400 0.37613000 -0.46837000 -0.04492400 -0.04492400 -0.00318590 0.00569190 0.49130000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.376 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.376 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 10.07171159 14.60654023 7.53102659 10.73785100 3.89276987 10.89203835 0.52356196 0.52356196 7.74914136 9.49027770 NA 8.98883974 3.89276987 10.41632770 8.92725411 2.39799458 9.35958222 9.56336485 9.52540923 10.74873938 8.87032619 7.21003228 11.94822310 3.93721255 8.21003228 10.52494009 3.26049242 NA 10.64894533 3.02603868 12.81451069 12.61265129 9.20301195 10.38203105 8.42439853 9.65538886 5.46213087 1.74592570 -1.06130019 4.10849100 8.29392037 8.81508640 9.25485100 5.44636542 7.21873662 6.06785165 9.83035310 6.33088641 10.03725948 -0.06145073 11.42841733 1.74592570 5.22397079 9.32713561 6.25516835 4.74592570 10.47869743 8.65109655 7.39800142 -1.06130019 13.88903416 1.74592570 10.81700354 NA 8.47772832 6.63900926 8.11598883 9.25598194 13.37744895 5.86930636 8.69512561 12.53999200 10.68718162 10.65023636 12.61771957 12.63358013 9.01734739 10.24861405 12.81987459 9.78797453 9.21585669 8.70012063 -0.06145073 7.50462357 10.95920214 11.391325 5.610995 8.619808 8.855941 8.072996 10.020565 6.739469 7.531027 9.921563 7.269487 4.610995 7.157738 5.529231 12.472021 10.376321 9.192417 8.729732 11.182933 6.438416 10.215275 10.661804 10.990798 10.627694 10.949797 8.934337 NA 9.129320 7.498826 6.589621 11.423644 9.747534 10.650740 9.833387 6.839436 13.730546 10.436920 10.286191 13.027358 10.307621 9.426409 3.523537 TCGA-BH-A0B0 56 0 NA 1428 breast stage i t1c n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 black or african american NA 85.58.0 8 2 2 NA 3 2 3 3 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.17776e-07 2.503025e-07 10.974103 8.084147 6.774245 11.142777 2.183836 9.499184 NA 9.470071 11.793175 9.569103 8.962802 8.196072 8.550945 9.771521 7.974695 9.451466 10.515153 8.922842 7.183829 4.278988 10.389733 10.368704 12.759368 10.240589 9.148563 10.378585 7.424836 10.277546 -1.275437 4.424835 9.062019 11.327328 12.674588 8.242067 11.958017 13.159742 9.635040 6.167340 3.309365 7.357392 8.025893 10.130070 8.484285 12.858021 NA 12.317438 13.241636 9.430893 9.611176 10.223246 9.942960 8.911749 NA 15.892829 11.028748 3.768788 9.563601 NA 4.701677 10.189453 9.757820 9.261615 10.516781 9.840091 9.990012 3.582375 10.961308 9.844635 7.616180 8.366449 NA 9.434342 14.680228 7.801774 10.649209 10.287593 8.183828 3.183836 3.768788 8.697377 8.599378 12.339567 NA 5.884268 7.557287 9.157982 11.124476 6.472590 6.081949 5.724397 9.568318 11.696659 0.309409 13.730591 5.863948 7.259673 12.049983 13.907102 12.682315 7.785093 9.573020 10.950508 10.391952 11.042940 4.009795 8.526913 11.479076 11.087984 1.046351 10.556891 8.945984 NA 3.632245 9.504937 10.841391 9.732826 9.080849 15.310210 9.648467 9.274182 8.746765 5.009800 13.990598 11.399251 13.039688 12.273339 10.119395 10.040678 8.346449 10.791024 0.00402430 0.52923000 0.52923000 0.00805670 0.00805670 -0.54653000 0.00569190 -0.55872000 -0.54955000 0.00374650 0.00374650 0.00374650 0.00680440 0.00680440 -0.00384900 -0.00221680 -0.00221680 -0.01876500 0.01111700 -0.01986300 0.00249690 -0.00110870 -0.54643000 -0.54643000 -0.54643000 0.01670500 0.01670500 0.01670500 -0.01161100 0.00402430 0.00402430 -0.00899060 0.00805670 -0.54653000 -0.54653000 0.00569190 0.00569190 -0.55872000 -0.54955000 -0.55908000 0.01349200 0.00591790 0.00374650 0.00027728 0.00027728 0.00027728 0.00027728 0.00680440 0.00680440 -0.00384900 -0.00221680 -0.01876500 0.01111700 -0.55507000 -0.50443000 0.00249690 -0.00110870 -0.55573000 -0.54643000 -0.54643000 -0.01381500 0.01670500 0.01670500 -0.01161100 0.00291330 -0.55497000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 9.4161405 13.8934215 6.1167141 10.4012355 5.3219281 11.0844210 3.1167141 NA 8.7229875 9.6800469 NA 7.9794258 5.9240690 10.2664614 9.2625858 3.5317557 9.6342900 9.4360640 11.0937217 10.2557784 9.1671850 7.3718550 11.8586628 3.1167141 8.6551343 9.9900120 3.8943230 NA 10.4437858 1.8943327 13.7723302 12.7290563 8.7412051 9.7016769 10.1396106 9.2041772 1.8943327 1.0463514 -0.2756117 7.7687911 8.3243097 9.9788351 10.6923436 6.4725901 7.3682533 6.5761457 9.7516118 5.6551343 9.1538036 NA 11.1917478 3.7243993 3.8943230 9.9253568 7.4746680 4.5572875 9.3008813 8.3074795 6.7467642 NA 14.0235334 2.5317433 10.3013536 NA 7.8690552 5.5698860 7.7467649 8.3298766 13.0318112 5.0819489 7.5445758 11.9580166 10.5057567 11.1498751 12.8580208 11.4890612 9.1548495 10.6256410 13.2631315 9.1124142 8.5993784 9.2548033 0.7243883 6.5636005 11.1290063 11.430245 5.294253 9.303713 8.314984 6.879216 10.393951 6.981785 8.277066 10.240589 7.960411 3.183836 5.863948 5.736407 10.657719 10.734226 7.335422 8.815832 11.292353 7.403877 9.261615 11.075888 10.587034 9.897449 10.943868 9.153804 1.046351 9.805627 6.512300 6.324310 11.124476 8.641769 10.268709 9.568318 7.138025 14.003754 10.821771 11.128208 12.249183 10.505347 9.541380 2.811861 TCGA-BH-A0B1 66 0 NA 1148 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white NA 61.60.0 2 3 NA NA 2 2 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040709e-06 3.469029e-07 12.0902061 6.9020446 6.5239822 11.5485951 0.1605330 10.2773549 1.1605975 10.5550405 11.8312341 10.0714704 9.4077141 8.0102433 8.8175986 8.8552261 7.5924234 9.3120173 10.1200968 9.7342251 7.2409516 3.7455385 9.3700313 9.1773861 13.7167246 11.3755040 9.6090383 10.7517885 3.6200116 11.2223990 2.2760499 0.5756028 8.6117891 11.6028302 12.1032145 6.5181291 12.4599767 13.2463269 9.7310661 4.0018833 0.1605330 7.8748234 8.9732898 8.8782542 7.4428937 12.5847441 3.2760499 9.6867511 13.2364469 7.1340361 9.6164941 11.9545875 7.4211055 8.1605779 -0.4243004 13.5841989 7.8992554 1.5756028 7.7228205 2.5756270 4.6630770 10.0868738 11.1759929 9.8935932 10.1196137 9.3371665 9.5261711 2.6630713 11.6258041 9.9897720 4.1302060 8.0081574 1.1605975 10.7823244 14.1904402 8.6585628 11.9350904 11.5118852 7.9221289 0.1605330 -1.4243004 6.3103256 9.3659639 12.0273416 NA 3.0991774 7.2550956 10.3035358 11.3325886 6.2829753 5.0834091 4.7455385 10.5582524 11.8375633 NA 13.5819414 5.7947849 7.2230740 12.2270034 12.9153262 12.9036591 7.8092350 10.9647089 10.8958518 10.3800731 11.0475445 5.2194706 8.4100862 11.7531906 9.2013241 1.5756028 10.0599348 11.3231790 0.1605330 2.5819056 9.0604382 10.1369032 9.7093997 9.3120173 14.9090153 10.0442393 11.6315756 8.5742056 2.8975502 15.8314738 8.5742056 12.0600606 11.3720606 10.2436139 9.0734671 8.5122534 10.5571041 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.0060680 13.3603524 9.2932918 9.5471589 3.1605814 10.2958596 0.1605330 -1.4243004 8.7189986 9.3569750 NA 8.3504022 2.7455385 10.3602501 9.0674685 1.5756028 8.7959935 8.9042902 7.8862282 10.6929337 9.4073738 8.0913153 10.8587037 1.8975502 8.9473921 9.5261711 4.7455385 -0.4243004 10.2751877 2.7455385 11.7956913 12.7993154 8.7228202 9.9149086 10.5184963 9.2471564 3.1605814 -1.4243004 NA 4.7048996 8.3925991 9.4696752 10.8825314 5.3957929 9.0343500 6.9154659 9.9221290 6.5414002 10.0442393 -1.4243004 11.0281140 2.1605653 4.6417021 9.8205916 3.6256796 3.1605814 10.2226239 7.5586090 5.7752876 5.8702365 13.4444861 1.5756028 10.4355383 0.1605330 6.7455399 5.9850062 8.7555246 7.4613116 14.147924 5.018559 8.611789 12.459977 9.492987 10.389397 12.584744 12.296073 9.259487 11.532899 13.077888 10.605938 9.365964 8.857545 -1.424300 7.099177 11.939887 10.670683 4.684140 8.963632 8.810433 9.403752 9.631460 5.609037 5.289860 11.375504 6.980757 2.035061 5.001879 7.865035 10.617959 9.437478 9.752412 8.376515 12.186063 4.408508 9.893593 9.919911 11.309690 9.500428 10.107484 9.032996 -1.424300 8.632754 8.026600 5.083409 11.332589 7.417966 9.731066 10.558252 6.879396 13.350094 10.176457 10.266923 13.088973 9.465880 8.743034 -1.424300 TCGA-BH-A0B2 43 0 NA 1242 breast stage i t1a n0 m0 27-2-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 80.48.0 NA NA 5 4 1 1 NA NA 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.3779700 0.6592300 0.7013900 -0.0347680 0.0000000 -0.0990480 -0.0038779 0.0072448 0.0038907 1.6657000 1.6657000 1.7989000 0.0241270 0.0241270 0.0106510 0.0106510 0.0106510 -0.1586000 -0.1586000 0.0308730 0.0290440 -0.1085400 0.4854400 0.0241770 0.0241770 0.0754150 0.0754150 0.0754150 0.0150280 -0.4312700 -0.3779700 -0.2955600 -0.0226060 -0.0990480 -0.0575200 -0.0038779 -0.0038779 0.0394780 0.0072448 -0.4857500 -0.4588600 -0.4793400 -0.4815500 -0.0388500 -0.0388500 -0.0388500 -0.0388500 0.0241270 0.0241270 0.0276380 0.0106510 -0.1586000 -0.1586000 -0.1586000 0.0019418 0.0290440 -0.1085400 -0.4787300 -0.4455500 0.0241770 0.0256710 0.0754150 0.0754150 2.0050000 -0.0306770 -0.0469640 0.000 0.000 0.000 0.000 -0.159 -0.159 0.000 0.000 -0.109 0.000 -0.477 -0.433 0.000 0.000 0.000 0.000 0.000 -0.378 0.281 1.990 0.000 0.000 0.000 -0.132 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.487 1.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 0.000 0.000 -0.109 0.000 -0.477 -0.433 0.000 0.000 0.000 0.000 0.000 -0.378 0.281 1.990 0.000 0.000 0.000 -0.132 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.487 1.666 0.000 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-BH-A0B3 53 0 NA 1203 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 2 white NA 61.60.0 4 4 4 1 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 6.396621e-07 1.946798e-07 12.4887380 4.0451197 5.9587058 11.7038295 NA 9.2690093 -0.3811975 9.2877401 11.3527178 8.2681111 9.5106388 6.9407834 8.0823795 10.1981710 7.7036635 9.0659382 9.0996453 9.9889976 8.6188549 6.2770660 9.7673317 12.0087553 12.5782232 9.8780098 9.6849442 10.4382359 7.1266498 10.9016540 2.4262111 0.6188964 8.6032736 12.2888474 12.0784148 7.8307434 12.0944619 10.6781996 11.1724844 6.5495922 4.0111736 8.9928078 8.4100179 8.6412230 8.2824134 6.9631516 NA 12.9737243 11.5399522 9.6883049 10.3962707 11.5835569 7.7887803 7.6929962 2.7063095 16.4355405 12.4868287 3.2038119 7.5613697 2.3193000 6.7937802 8.8512759 9.8349946 9.5272477 9.7364982 9.1934487 9.9237767 -0.3811975 10.6618824 10.4461978 3.8283066 7.9697940 6.1187003 6.6018480 15.8831694 8.4189299 11.7555258 10.3505984 10.2761735 2.7063095 NA 9.2788511 9.4799419 11.0700662 NA 5.0782853 7.5136731 9.8978852 9.5591687 6.9407834 6.7987647 6.1962844 8.1167068 11.7355240 3.5257432 13.9113205 3.7063206 7.0409198 11.3382439 14.3165286 12.7920637 8.1443758 11.0480002 11.3741600 10.6055362 11.0247943 4.7063206 7.6903172 12.3695621 10.2649638 0.6188964 10.6495222 9.7468493 1.2038276 2.8259688 9.2482118 11.7662191 9.9928078 9.2066327 15.2199439 10.8304392 9.3712358 5.7481392 2.5257432 13.0542649 8.5151873 12.9790849 11.9489316 9.6976731 9.6335731 8.1502367 11.1439280 1.32280000 2.09250000 0.99053000 0.00000000 0.47873000 -0.16612000 1.03540000 0.50846000 0.10555000 0.03256300 0.03256300 1.12360000 1.20890000 -0.47427000 0.04840400 0.04840400 0.04840400 -0.13199000 0.36084000 -0.12043000 -0.15771000 -0.07227400 0.42351000 -0.03395000 0.08334200 -0.13510000 0.52625000 0.49009000 0.21906000 -0.15326000 0.37232000 -0.43908000 0.00000000 -0.16707000 -0.19987000 -0.48323000 -0.47586000 0.50846000 0.10555000 -0.19212000 0.06895200 -0.08797700 0.03256300 -0.13070000 -0.13070000 -0.13791000 -0.13044000 -0.47427000 -0.16154000 -0.10127000 0.17935000 -0.13199000 0.04613300 0.05965100 0.61752000 -0.13303000 -0.09604400 -0.03558500 -0.17360000 -0.03395000 -0.47754000 -0.13510000 0.52625000 -0.00097017 0.28441000 -0.16879000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 8.9642603 14.2630494 5.5014997 8.6103771 1.5970305 11.1669545 2.5257432 6.8996264 9.1830046 8.9840840 8.6018488 8.4830414 4.7686025 11.0432839 9.3837268 3.8283066 6.6188553 9.4229860 7.0451197 10.6188551 9.0937981 7.4326363 12.2677744 1.4262111 8.9123268 9.9237767 2.0783024 -1.3811975 11.0106357 0.6188964 13.0471498 12.6576027 7.7558463 10.0669714 11.1414366 10.1844332 6.0700673 1.6188494 0.2037650 2.4262111 8.0864606 10.2349445 7.3433687 6.1657492 8.6522782 7.2518507 9.8374184 5.1266508 9.7043275 2.5257432 12.2212060 5.5014997 3.9764095 9.5447582 5.5628926 8.6244797 9.4799419 8.3870394 10.5900393 5.7377949 13.3801985 0.2037650 11.0411827 2.8667893 9.3218934 3.0782853 7.9720022 8.4721648 12.1245426 8.3569475 7.3670478 12.0944619 10.0482618 11.6857852 6.9631516 8.8295265 9.4205635 10.7981422 13.9396909 10.8043500 9.4799419 8.9464077 0.6188964 7.7429763 10.7758862 10.970899 6.079107 9.274386 8.940783 8.989401 9.557023 7.783762 5.596136 9.878010 11.017332 -1.381198 6.773673 9.396603 12.655716 10.121687 7.716887 9.470604 8.483041 9.182051 9.527248 10.205226 11.034069 11.020001 10.542925 9.397754 -1.381198 9.636582 7.222815 9.659145 9.559169 6.150237 10.155102 8.116707 7.911177 13.892906 10.401444 10.159952 13.007949 11.297235 9.287740 3.976409 TCGA-BH-A0B4 65 0 NA 1191 breast stage iiia t2 n2 m0 2-10-2014 male 2007 NA NA infiltrating ductal carcinoma yes 6 white NA 47.68.0 3 1 1 NA 3 4 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699824e-06 2.42832e-07 11.1234055 7.0015613 6.8171372 11.1050589 3.3577068 9.8714326 NA 9.5913247 11.1304320 7.2884425 9.3869924 6.2525235 8.9464197 10.0624733 7.1778839 8.1905951 8.7713330 9.2570620 7.3911284 4.1125917 9.4075537 10.4798859 13.0693720 10.8022023 9.3647324 10.3724230 6.2031953 10.0398219 0.9426834 0.9426834 8.0511921 11.1134272 13.1442810 6.8575506 13.8144445 12.1903973 10.3385587 5.8334391 1.3577209 7.8929805 8.8191844 9.1075746 8.0301302 12.0700171 -0.6422791 11.3772958 13.4515352 5.5475300 9.5388572 11.1794791 6.1258887 6.9797567 NA 13.9109846 12.5084044 NA 7.8006489 NA 5.1390642 8.9180379 9.8545588 9.1291946 9.7755576 9.3925040 9.7031104 0.9426834 10.8958940 9.9760906 4.4451705 8.2063282 2.5276209 10.2877031 14.7660348 7.8982979 10.7408693 10.7397886 9.1905951 NA 5.1650597 7.8334385 9.0141299 10.6402144 NA 7.1650597 6.6614860 9.6162711 10.5382359 6.0991710 5.0015591 4.8495590 9.1746888 11.2672232 2.8171320 13.1601205 4.5276271 6.6796335 11.5937193 13.9047803 12.3545316 9.0719506 10.8773413 10.4876321 10.2802895 10.2411120 3.6796377 8.4998120 12.3218654 10.8600396 0.3577209 10.2832595 8.7196489 -0.6422791 2.1671331 8.6705879 10.6020690 9.5226119 8.8171368 15.4897428 11.0047137 10.3786850 6.5865231 1.9426834 14.1260962 8.3577051 11.9797569 11.2698459 9.4753482 9.4116309 7.7414097 9.6637668 0.00277430 0.00429390 -0.51138000 0.02817100 0.53288000 -0.00556600 -0.50776000 -0.01480700 -0.59937000 -0.00196850 -0.00196850 2.50260000 0.04256100 -0.01043500 -0.01191500 -0.02096300 -0.02096300 0.01402200 0.99900000 -0.51109000 1.09100000 0.02451900 0.00024865 0.98908000 2.11470000 0.00844560 0.03366100 -0.00901910 1.20020000 -0.42552000 0.00277430 0.00983820 -0.55619000 -0.60856000 -0.56359000 -0.02181200 -0.02181200 -0.54867000 -0.59937000 -0.51838000 0.52920000 0.77076000 -0.57765000 0.00830630 -0.53705000 0.02185500 0.55492000 -0.01043500 0.03718800 -0.53736000 -0.02096300 0.01402200 0.99900000 0.23361000 -0.57903000 -0.00432150 0.02451900 -0.53197000 -0.53258000 0.98908000 -0.55569000 0.00844560 -0.01934600 -0.50662000 -0.04359600 -0.50393000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.357 -0.489 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 1.772 1.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.357 -0.489 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 1.772 1.772 0.000 0.000 0.000 8.8949235 14.1740888 6.4345215 10.1690798 4.4869910 10.3399857 1.3577209 -0.6422791 7.8694575 8.2031953 -0.6422791 8.3548845 NA 10.6637668 9.0788043 3.7500276 7.7327447 8.7414093 9.4972565 11.5407201 8.3031487 7.5768735 11.7808210 3.0581433 7.5622760 9.7031104 7.4398541 NA 11.1250619 3.4451705 13.5861480 11.8270925 8.7435675 9.4895620 9.3605201 9.8078854 5.6975542 -0.6422791 NA -0.6422791 8.6751176 9.8871356 10.2464483 4.4869910 6.3835090 7.7414097 10.0168090 5.6614845 10.7424888 NA 10.1100857 1.3577209 4.3577068 8.7673929 5.6001181 3.8812633 9.8263290 8.5226121 5.4451672 NA 13.7042188 1.6796490 10.5182068 NA 7.8890865 5.7670959 7.4921312 9.5276301 13.9120715 5.6796321 8.0371851 13.8144445 9.7585845 9.3647324 12.0700171 11.6347018 9.1521210 10.3612230 12.5219835 11.0248166 9.0141299 8.2675981 -0.6422791 7.7839699 11.3046114 11.332478 6.455737 8.695327 9.135782 9.327811 10.479912 7.058144 7.792334 10.802202 7.429167 4.445170 7.037186 6.332579 10.768156 10.525123 6.950162 8.863517 10.935134 4.750022 9.129195 10.831918 10.560441 10.156987 10.796497 9.042454 NA 9.390095 7.445168 5.507452 10.538236 6.670588 10.873898 9.174689 6.476646 13.878753 10.357705 10.016809 12.661058 10.720197 9.677377 3.357707 TCGA-BH-A0B5 40 0 NA 1471 breast stage iiia t2 n2a m0 2-10-2014 female 2007 NA NA infiltrating lobular carcinoma yes 5 white not hispanic or latino 96.50.0 5 2 3 2 3 2 1 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595753e-06 3.122126e-07 10.730299619 7.393279757 7.418814834 11.508756744 0.415974946 10.541090128 NA 10.218516013 12.176823493 9.116439358 10.338955611 7.791039131 9.291749043 9.928246244 6.668665196 9.709471237 10.348583435 9.802939903 7.223354970 5.449422711 11.326080176 9.888690440 12.367284319 11.348583490 9.461076664 10.807511742 5.907852072 10.748592890 NA 6.829627609 8.682786062 11.715207638 12.393637303 6.404683473 12.955521959 14.027658453 9.858424773 6.393278899 1.223360763 6.644818147 8.438367297 9.448045253 8.496817036 13.024254446 3.663925224 10.939561585 13.814609721 8.008456635 9.238315404 10.993664456 7.840166104 6.190786693 1.000937447 13.418886695 8.465847978 1.415974946 8.889705333 NA 4.197362184 10.361809255 10.641207045 9.872353989 11.898177321 10.016377225 9.853231570 0.737946293 11.783414377 10.829098595 7.019626309 8.346737101 7.937599808 10.443214494 14.601455826 8.088036093 11.522399001 11.309301151 8.917836890 2.808323264 7.130245180 8.779039372 8.899815491 12.280282502 NA 5.102498570 7.393279757 10.552349979 11.080891259 5.074209982 6.177551094 6.067051384 10.486791388 12.271646796 4.298643654 13.739933972 7.027024633 8.467208551 12.195103361 13.197820342 13.185475923 8.469925445 10.198178824 11.150709251 10.906271381 11.655001355 5.381785182 8.918831343 11.614751569 10.233383003 0.001009533 10.256384208 9.088424936 0.001009533 4.503889326 9.129386063 11.009157279 10.531043265 9.169216254 14.732723082 9.855311095 9.561931715 9.128526692 3.545276500 14.419253980 10.263448558 13.077165325 12.914537224 10.582162686 9.813674268 9.190786693 10.934881419 -0.2909700 0.6788200 0.6386500 0.2576200 -0.0049844 -0.3037500 0.3687100 -0.2929600 -0.6277900 -0.0074720 -0.0074720 0.0073609 0.0223040 0.0258120 -0.2949700 -0.2949700 -0.2949700 0.2998500 0.2975600 0.0000000 -0.2865500 -0.2776200 -0.2342300 -0.2342300 -0.2342300 0.0434400 0.0434400 0.0406320 0.0391950 -0.2663700 -0.2909700 0.0091705 0.0050289 -0.3002800 -0.3037500 0.2965300 0.2965300 -0.2929600 -0.6277900 -0.6277900 0.0148880 0.0022193 0.0171240 -0.2911800 -0.2911800 -0.2911800 -0.2709300 0.0258120 0.0258120 -0.2934300 -0.2949700 0.2998500 0.2975600 0.2975600 0.0000000 -0.2865500 -0.2776200 -0.7159800 -0.5720000 -0.2342300 0.0105540 0.0434400 0.0617940 0.0391950 0.0207630 -0.6660500 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 9.1940767 13.8578091 7.9744203 10.5255039 4.0598571 11.1635633 1.7379463 NA 8.7197803 7.5708181 -1.5838088 8.6304765 3.7379247 10.0004925 9.7932102 4.6448196 9.0075221 9.9677078 9.4631236 9.0009622 9.5238248 8.0652556 10.0530773 2.5034505 8.9178369 9.8532316 3.5452765 NA 10.4783831 2.0009735 12.4292351 11.8131394 7.1608335 9.8018621 8.7288827 9.0697403 7.3904140 0.7379463 1.4159749 10.6900865 8.4369797 8.7580743 10.2010434 5.1439199 6.9811014 5.7014021 9.6627403 6.1370998 9.3311321 -1.5838088 11.5923286 4.6254517 4.0307069 9.5819743 5.7867741 5.1024986 10.2461186 8.6119868 6.0670514 0.7379463 13.5585455 -1.5838088 10.0435334 NA 8.6424117 4.6058262 7.5113969 8.1233589 12.0030457 6.3817835 7.6181234 12.9555220 10.3993495 10.5878019 13.0242544 11.7159231 9.1996363 11.4099994 13.3682859 10.6819076 8.8998155 9.5225625 0.7379463 7.0919568 11.9585479 11.376726 8.644818 8.506112 9.728315 9.368013 10.599951 7.174223 8.572083 11.348583 5.673387 1.000937 6.210416 8.102220 10.997200 10.292517 7.471282 8.403263 12.520025 5.492815 9.872354 10.596841 10.907101 10.051718 10.678682 9.236179 NA 9.327549 7.387543 5.555552 11.080891 7.298643 10.637324 10.486791 7.487462 13.390190 9.975377 10.145195 12.664965 11.191198 9.775200 1.415975 TCGA-BH-A0B6 47 0 NA 1732 breast stage i t1c n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 185.42.0 NA NA 4 5 NA NA 1 3 2 1 5 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 7 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1.407257e-05 5.089485e-06 11.9452090 6.5639025 6.9637053 12.1162969 -0.3309732 8.6406282 NA 9.0354067 11.6042496 8.5998217 8.4172774 7.4828660 9.0484629 9.9140429 5.0614004 9.7297805 10.1803431 9.8194665 7.1926469 5.5019741 8.9614063 10.0742260 14.1224838 10.8305314 9.1539074 10.5748476 9.9994413 9.9300041 0.9910274 NA 9.0321243 9.4659353 11.8001376 7.0222313 11.8530300 12.7268225 9.1356708 5.0441230 1.9910274 6.6290870 7.9146375 8.5486678 6.4037943 12.4111834 NA 11.4183255 14.0563278 5.6463643 9.4402521 10.0172594 6.0441230 7.1729105 NA 17.7743429 14.0710670 -0.3309732 10.3884734 NA 5.4764400 9.6363109 9.7025076 9.0646186 10.2183879 9.7697469 10.3272961 4.6463643 10.3348645 10.1120280 4.8785390 8.1161677 8.7011304 10.1463369 14.4576755 6.1654196 10.5524916 10.2549859 9.5812254 -1.3309732 8.2727110 7.3379697 8.7025076 10.6701409 NA 3.1926518 8.1182330 9.9411311 10.8181965 11.5771018 8.0111590 4.6914504 10.3699577 11.6434991 2.8390123 13.2622422 5.3970054 6.6348691 10.8377567 12.3364179 12.2122372 8.9486952 10.7438950 10.7957890 10.1511413 10.3953027 3.9170116 8.8675296 11.2067883 12.0085170 -0.3309732 10.4699844 8.7631622 1.6690721 1.6708856 8.7657996 10.4168580 9.3102331 8.4764396 15.1615324 9.4155990 9.5990827 6.0178128 3.3695223 14.9210107 9.0222313 12.7617591 12.2751427 9.6035127 9.4764394 7.6086636 10.1559799 -0.3656700 0.2623200 0.2623200 0.1312500 0.1006000 0.3301100 -0.0681270 0.1074500 0.1074500 -0.0508060 -0.0508060 0.3109700 0.1064000 0.1064000 -0.1291400 0.0927500 0.0927500 0.0703860 0.0022193 -0.1526000 -0.1136500 -0.3592000 0.1112500 -0.4915500 -0.1668800 0.1428000 0.1428000 0.1393400 1.3330000 -0.0790770 -0.3656700 0.0622230 -0.3948100 0.0617940 -0.1952500 -0.0681270 -0.0681270 0.1074500 0.1074500 0.1074500 -0.0496950 -0.0496950 -0.3945300 -0.0084385 -0.0084385 -0.0084385 -0.0923450 0.1064000 0.1468200 -0.1291400 -0.3880600 0.0703860 0.0022193 0.0022193 -0.1526000 -0.0568460 -0.3592000 -0.1301800 -0.3400200 -0.3623800 0.1163800 -0.3406700 0.1428000 0.1565100 0.0234280 -0.3364100 0.106 0.106 -0.129 0.000 0.000 0.000 -0.153 0.000 -0.359 -0.138 -0.138 -0.340 -0.340 -0.387 -0.282 0.143 0.143 -0.366 -0.103 0.157 0.157 0.000 -0.336 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 -0.113 0.231 0.000 0.000 0.000 0.106 0.106 -0.129 0.000 0.000 0.000 -0.153 0.000 -0.359 -0.138 -0.138 -0.340 -0.340 -0.387 -0.282 0.143 0.143 -0.366 -0.103 0.157 0.157 0.000 -0.336 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 -0.113 0.231 0.000 0.000 0.000 10.7492358 12.6397297 5.6232816 10.1544108 6.4239714 11.9316199 5.5998206 -1.3309732 8.7565473 8.8264315 0.6691175 6.9074892 0.6691175 10.7425567 9.3138422 1.8389921 9.6442161 8.9533304 9.4231369 10.2455689 10.1877327 6.5208339 10.7802202 3.1926518 7.7749932 10.3272961 3.9544848 NA 11.0435807 2.7565537 12.7373590 13.0348602 8.3625716 10.3923188 9.7202935 9.7899705 2.3695223 2.3695223 NA 2.4764335 9.4900612 10.9966372 11.5163377 5.0953506 9.4335498 8.5286194 9.7611810 5.8687559 9.2284616 NA 11.6773381 4.6463643 3.1285244 9.7842517 5.3231467 7.9521728 10.4210469 8.9475341 11.6402688 -0.3309732 13.9382478 1.4764335 11.1379631 NA 7.0784753 5.6232816 7.7538926 9.1788595 11.5262628 4.8979035 8.5654171 11.8530300 9.7815241 10.5321093 12.4111834 9.3841886 8.6520781 10.3446006 12.6885884 9.0635472 8.7025076 9.4529014 -0.3309732 7.3590827 11.0517086 10.9828179 6.8539595 8.5894373 8.4021001 6.4105514 10.3659565 9.3738528 8.1808371 10.8305314 7.6718998 0.9910274 5.5517283 7.3541136 9.6115990 10.7999768 7.8514792 9.0408612 10.4401613 8.4828656 9.0646186 11.4908585 10.6290865 10.2851739 10.3931721 8.1946052 9.8314759 9.4354975 7.4796558 9.2540472 10.8181965 6.3970054 10.8629179 10.3699577 7.2874704 13.6404485 10.4210469 10.4748284 12.3835447 10.4113940 8.2004661 3.5270703 TCGA-BH-A0B7 42 0 NA 1733 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 85.58.0 6 3 2 NA 3 5 2 6 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 3.337367e-07 2.781139e-08 10.6867808 9.0450347 7.5240323 11.3024863 0.5156115 10.3500751 0.1005740 9.9543958 11.8561496 9.8056228 8.4463414 7.3982469 8.8442789 9.9423930 6.6905302 9.9632039 10.2169105 10.3743621 7.7963745 4.7250595 9.6659860 10.4617793 14.2254687 10.2998298 9.2821330 10.5215794 7.5351945 10.3520450 0.1005740 3.2704841 9.4224946 12.5613637 12.4809374 7.6319482 17.6804251 12.1065419 10.4444925 5.1594597 2.9750432 6.3610946 8.8010063 6.9079218 6.9953839 12.3705698 NA 11.2738272 11.8462409 6.3100201 9.0983859 10.0357315 10.1558490 8.4013002 1.8375396 13.4937456 9.9014664 1.3229665 8.9994197 NA 5.8010060 10.0649074 10.7256665 9.6792536 10.4515057 10.2536964 9.7128207 2.2160513 11.5376250 9.9138133 5.9334570 7.1303142 12.4300826 8.3689137 14.9153993 7.4164707 11.2166938 11.2918314 9.9543958 3.1005740 5.4928851 8.3797903 9.1942043 12.9876602 -1.4843885 5.0074557 7.0194295 9.4971712 11.1189985 6.6500307 8.7103608 5.1303131 9.8665431 11.6364899 -0.4843885 13.9008935 5.2021042 7.6704219 11.5768064 14.6114131 12.6239651 7.7682697 10.8753536 11.3828828 9.9875687 11.0491771 4.6241301 8.6070395 11.6366518 9.0273567 -0.4843885 10.3917372 8.7753472 2.2160513 2.8382459 10.0024391 9.1809400 9.7256665 8.5407437 15.4389083 9.8153844 12.6464963 7.2229629 3.0391735 14.6695321 9.3221537 13.2960413 12.4071030 10.3599175 9.7575872 8.3951871 10.0918380 0.0331360 0.0772090 0.4657000 -0.0224690 -0.0224690 3.6569000 0.4985700 0.0129870 0.0129870 -0.2765000 -0.2765000 1.4115000 0.0000000 -0.0959120 0.0416000 0.0416000 0.0416000 -0.1757500 -0.0480720 -0.1855900 -0.1663700 0.0041632 -0.0674580 3.6569000 0.0034687 -0.0598070 -0.0598070 -0.0598070 -0.0015243 0.0339720 -0.3214700 0.1999900 -0.0224690 -0.0193140 0.0831720 -0.1465700 -0.1382000 0.0129870 0.0129870 0.0425900 -0.0410240 -0.0878440 -0.2765000 -0.3769000 -0.3769000 -0.1919900 -0.2093800 -0.0959120 -0.1323600 0.0416000 0.0416000 -0.1757500 -0.1097100 -0.1097100 -0.2419500 -0.1663700 0.0041632 -0.1182200 -0.0674580 -0.2962700 0.0188030 -0.0598070 -0.0598070 -0.3775200 0.3318900 -0.2268300 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 9.8769996 13.2794388 6.2637969 10.0204230 6.3229593 10.5572632 5.1738150 1.3229665 8.2953235 8.0134561 0.8375396 8.5733385 4.4224954 10.7262754 8.9872794 2.6030744 10.0996270 9.5120775 10.5289267 10.3967180 9.3234660 7.5924197 11.8015841 3.1005740 8.4654309 9.7128207 4.8906412 NA 10.8562887 4.4698013 12.9658487 12.6338963 8.6136363 9.9652686 9.0204230 9.3951873 5.6653501 2.1005740 -0.4843885 6.6754758 8.3642270 9.9554349 9.4359569 5.8731562 10.7768645 7.4344673 9.7587780 6.7682690 9.5668131 -1.4843885 10.2924483 4.4463423 3.7635284 9.5670101 7.0127374 6.6551557 9.9355642 8.9249951 8.7718126 3.6448830 13.8150625 1.6855365 10.4907355 NA 9.9052354 6.1229336 8.5448914 8.1630624 12.6475414 6.7201758 12.0687533 17.6804251 9.9455338 11.3069704 12.3705698 9.2212364 9.1800514 10.6798825 13.6995107 10.9457952 9.1942043 10.1057233 0.5156115 7.2804757 11.5870664 11.010460 7.085460 8.869854 9.487866 7.584382 9.876473 8.013456 7.958547 10.299830 6.521228 3.270484 8.393655 7.504118 12.914815 10.941082 7.753531 9.473432 10.992856 7.688031 9.679254 9.968360 11.529624 10.562728 10.037695 9.982190 2.322966 10.146458 9.427782 8.308395 11.118999 7.392121 10.944603 9.866543 7.277155 13.168393 10.629346 11.163737 12.030195 10.651313 9.104319 4.373586 TCGA-BH-A0B8 64 0 NA 1569 breast stage i t1b n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 3 1 NA 3 NA NA 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.946798e-07 11.7196471 5.9214935 6.5705874 12.0316021 -0.1229625 10.3942776 1.6844597 10.5723287 11.6786067 8.0012218 10.2715631 7.6452845 9.9862781 9.5082775 8.2629626 7.7474653 9.9269490 8.9619086 6.2694185 2.0470148 9.1485635 10.8078377 13.3588998 8.7459230 9.1107200 10.6836500 4.6844541 10.2445151 2.3365405 -0.1229625 7.6682631 11.0706257 13.7091003 8.5227588 13.1740883 13.6337088 9.2423293 5.3848960 1.8771160 8.4954857 7.8543803 9.8464869 8.8543803 13.2380846 7.3689534 9.9940940 14.3335511 5.4006609 10.4174754 10.8056188 8.2822419 7.2779801 NA 12.8834072 10.6800206 4.9645650 11.4218234 3.1990284 4.4620654 9.7210214 10.1291744 10.8280207 10.6755721 9.3528338 10.0394917 5.9214935 11.3629297 10.4345641 5.4162588 7.9269488 0.4620523 11.2052143 15.0860777 7.2316138 12.8099610 11.6090558 8.6151926 -1.1228055 7.3568806 8.0792240 9.4172285 11.0470254 NA 5.4620621 7.8994681 10.0932399 11.4606533 5.7350807 4.8078392 4.5495275 9.7194508 12.2401400 5.4006609 12.7890541 5.1808798 7.9187595 11.4848930 11.8751619 12.7724863 8.0594948 10.2710270 10.8392734 10.8990936 11.2707590 5.8078366 7.9856251 11.3781911 12.4966326 NA 10.0816716 9.3241837 -0.1229625 2.6104638 9.5009819 11.2012809 9.9221775 9.0369717 14.6599451 10.4297695 9.8493622 6.7959630 9.5548200 15.9630811 8.3528340 11.7379933 11.1800248 10.1774529 9.1717212 9.0644526 10.3542110 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.9022400 12.0698555 4.4620654 9.4667515 1.1874511 10.5583388 -1.1228055 -1.1228055 8.0293850 8.2390443 0.4620523 7.0013767 5.0268487 10.0871629 9.2401399 3.7839909 8.1273986 7.8078379 7.9751326 10.2330020 8.3922483 7.7779674 10.8767481 1.7469576 9.4249588 10.0394917 4.0865545 NA 10.7543845 1.1990598 13.4726493 11.6662264 8.2124905 9.4991523 8.7536172 9.5477565 7.6715163 1.4620523 NA 3.0470323 9.5512926 10.2252753 10.3508062 4.5495275 7.3729556 8.4220648 10.4986945 5.7597444 10.1059191 NA 11.2825078 3.2694222 4.1990284 8.8733620 5.8703228 2.8770964 9.3619232 7.9986339 6.2949534 6.2169495 14.3956921 1.1990598 10.3913213 -0.1229625 8.1808813 4.8994705 8.2012810 9.3947699 13.695029 5.368953 7.780982 13.174088 9.529049 10.799685 13.238085 11.070010 9.677191 11.203530 12.159175 12.321209 9.417228 7.953916 2.336540 7.577540 11.016332 10.6527106 9.4714251 8.4201320 9.4760833 9.1578711 9.7831492 5.5209565 8.3324278 8.7459230 7.7779674 1.1990598 4.5209565 6.4997375 10.2313497 9.0755455 6.9908426 7.8771007 12.5974515 3.9645650 10.8280207 11.4622977 11.4340853 9.3190071 10.5317364 9.3148524 0.4620523 8.2656990 6.7959630 3.9645650 11.4606533 6.6319875 10.0619757 9.7194508 7.2564786 14.0248618 9.8210804 9.4936491 12.6202518 9.8904230 8.7612710 2.5775376 TCGA-BH-A0B9 44 0 NA 1572 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 6.674735e-07 1.668684e-07 12.1446548 2.1629512 7.4464961 10.8866058 0.6483734 8.9657843 NA 8.5672347 10.7090676 10.5103447 9.2906813 7.4390696 8.8190122 9.8318298 7.3879113 8.9291424 8.6731158 11.0268214 9.4084975 5.7717536 10.2857728 10.5595496 11.8226732 11.9086192 10.6768698 10.7921193 7.8254352 10.4866752 0.1629834 -1.1590736 8.4694623 10.4692344 12.9551251 8.2818860 10.6054737 12.6383743 10.1635083 7.8211566 4.5552640 7.7251870 8.6927658 11.5465412 6.5655302 6.3645794 -0.5741111 9.8100435 8.7282372 7.8744398 10.7584970 11.3593011 5.8068009 2.0109588 -2.1590736 14.5394307 10.8917157 2.0109588 9.1996679 3.7717588 3.3956112 9.2865490 11.2100688 8.8197273 9.5340680 9.7452750 9.5345037 2.1629512 10.2092504 10.3527694 5.5757268 8.0370038 1.1629190 8.8282809 11.4650125 7.9905862 10.2704235 9.9719091 11.4082598 3.0504669 NA 8.6443405 9.1980189 9.9271529 1.5414653 3.5959094 7.8716841 12.2708811 11.1102896 7.8182965 7.3408622 6.3994377 7.8771903 12.8031446 2.5959094 13.0667890 4.1808639 6.9780080 10.9584975 10.6825811 12.8979931 7.7776544 11.0317674 10.9836025 11.2611414 10.6376648 4.1078050 10.3258396 11.4701457 10.0716377 NA 10.2680677 9.9148236 0.6483734 3.5692116 8.5561209 12.1144481 11.0871635 8.8633847 14.7277969 10.8288137 8.9780080 8.1651974 -0.5741111 11.4146639 5.5824837 12.3674549 11.9559791 10.3070932 9.8602600 7.9377316 10.1332750 0.01768400 0.65774000 0.00730700 -0.56624000 -0.01450300 -0.00180140 -0.03667400 -0.54078000 -0.00263220 0.02904400 0.02904400 0.07570300 0.02412700 0.49649000 0.00847430 0.53573000 -0.00097017 1.61650000 -0.06933200 1.72130000 -0.56823000 0.04897200 -0.50619000 -0.50619000 -0.00622860 0.90936000 0.08435400 0.46468000 0.03453600 -0.27176000 0.01768400 0.03637000 -0.55236000 0.02468900 -0.02876500 -0.58078000 -0.61080000 -0.54078000 0.00000000 -0.02151000 0.03750000 0.00305220 0.02904400 0.57451000 0.57077000 -0.56331000 -0.53561000 0.02904400 0.05394800 0.02820000 -0.00097017 1.57660000 0.00597000 0.02006300 -0.57841000 -0.56435000 -0.46067000 0.07455200 -0.50619000 -0.50877000 -0.06517900 -0.50494000 -0.38940000 -0.55547000 -0.52287000 -0.54804000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 9.0178131 11.9519078 7.0109420 9.0146939 5.4920679 11.7746152 4.3328726 0.6483734 9.3293591 9.2541157 7.8536414 8.2789874 5.7717536 10.7257596 10.4224527 3.9907643 6.9728741 9.6378676 7.9218344 9.8042742 10.0642885 7.7113813 10.4685506 2.6483734 9.3723982 9.5345037 6.7358349 -2.1590736 9.5727601 4.3328726 15.0350329 12.3024322 7.9996263 9.4790001 9.5401554 9.7580158 4.8410170 2.4259695 -2.1590736 4.6091994 8.5143259 10.2813669 5.1808679 5.3956044 8.2228949 7.1241048 10.0342340 2.8854182 10.7073298 4.4409323 11.7335596 2.5414653 4.0109409 10.3132100 6.7475472 5.4334736 8.1298826 7.1470787 6.9311287 3.0889387 14.9362695 1.0109230 10.8157898 NA 9.8129195 2.5959094 8.3557308 7.8082428 11.761950 9.228496 8.765087 10.605474 11.026357 11.309895 6.364579 11.058369 9.581131 12.049022 13.278866 12.861736 9.198019 8.294288 6.176407 8.599240 10.068031 9.948888 5.224719 9.204604 9.909459 8.504575 10.051874 7.983124 5.410874 11.908619 12.110655 -2.159074 9.188638 9.797001 12.911599 9.665578 7.921834 9.139079 9.421746 6.978008 8.819727 10.203782 11.512889 10.031150 9.997416 9.273037 -1.159074 9.701844 5.907107 6.860608 11.110290 4.949540 9.951826 7.877190 8.233796 15.883168 11.552469 11.026667 11.974159 11.426331 8.586691 4.162943 TCGA-BH-A0BA 51 0 NA 1132 breast stage iiic t3 n3a m0 2-10-2014 female 2006 NA NA mixed histology (please specify) no 27 white NA 61.60.0 5 2 3 2 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 11.0899548 8.2673209 6.5946948 11.6289770 1.0401209 10.5339617 0.7770304 10.3096225 11.6025077 7.9806646 9.9201999 8.1555833 8.5844267 9.6529747 6.3740066 8.7532064 10.2737259 9.5138121 7.6150153 3.3131297 10.5083908 9.7142984 13.8750381 9.6294453 9.2729269 10.7589245 5.9308769 10.5269312 0.4551233 0.4551233 9.4885668 12.9028081 12.3272414 7.1026025 12.9278346 14.2541217 8.7600656 5.5844274 0.4551233 6.6498999 8.4607684 9.6621580 6.7497649 13.0850126 -0.5447714 9.6863648 13.5191286 6.8517490 9.0241069 10.9369432 8.7160632 7.4381373 1.2624933 14.5881390 7.7629593 3.7770725 7.6839624 0.4551233 5.8038728 10.5571194 10.8918553 9.5232503 12.2538180 10.3721428 9.6143845 1.9145645 11.8282807 10.6947422 7.3068929 9.3529891 2.8474558 10.0039656 14.3211186 8.0521534 11.2131587 10.7609205 8.3784713 1.4551233 4.4093434 6.9943025 9.0504013 11.9881083 NA 8.8236503 7.2430464 9.5063526 10.8711495 4.7949928 6.1346235 3.6250717 10.5029493 11.6721927 4.7949928 13.0957276 4.9145741 7.7680268 11.6099618 12.0713479 12.6613187 6.6498999 9.9747799 10.3972916 10.4574137 11.1758155 5.4551431 8.5623607 11.6761266 10.9078998 1.0401209 9.7798868 9.1898535 1.9145645 4.4172314 9.4424078 10.2990648 9.7503387 8.9952717 14.6461837 9.8285527 10.4558480 8.2463064 3.0401034 14.8566399 10.2753227 12.7367840 12.5488089 9.8033186 9.2511834 9.2600814 10.7009341 0.469980 1.022000 1.021800 0.041175 0.044715 -0.321000 0.418980 0.379730 -0.335140 0.361660 0.361660 0.361660 -0.361930 -0.337910 -0.343200 -0.232640 -0.344230 0.389820 0.389150 -0.328500 0.405270 -0.343660 -0.358060 -0.358060 -0.363940 0.324790 0.341120 0.341120 0.377430 -0.341710 -0.335030 -0.310140 0.080745 -0.397970 -0.323620 0.418980 0.418980 0.379730 -0.335140 0.409440 0.564360 0.307290 0.361660 0.400110 0.400110 0.400110 0.630800 -0.338370 -0.189860 -0.186600 -0.344230 0.374830 0.389150 0.909760 -0.328950 0.405270 -0.343660 -0.147210 -0.365560 -0.358060 -0.328320 0.460070 0.341120 0.391470 0.044715 -0.150550 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 9.0116497 11.7283565 5.4324250 9.9913909 2.7346121 11.3096225 2.3620209 1.0401209 8.4691644 8.2299306 NA 8.7936238 3.2100303 9.3969250 9.7364943 1.9145645 9.6959350 9.9629384 11.1226989 10.3710231 10.0909071 8.6718895 11.0881389 2.7770725 10.4614698 9.6143845 3.2624933 0.7770304 10.1646583 2.7770725 12.1746395 12.0102121 8.3177812 10.5482311 7.4238109 9.3939882 4.5212329 0.7770304 -0.5447714 1.9145645 8.6779388 9.2633035 11.1531972 6.8814089 8.6100758 6.5426063 9.6449683 6.5319600 8.8928958 -1.5449819 11.3142902 4.0990006 3.9145741 9.7230832 5.1963395 7.3316604 9.3612828 8.7148870 9.2083605 -0.5447714 13.4804996 2.4551496 10.1398923 NA 6.8772080 5.8560221 8.4537340 7.9308769 11.245289 4.563671 8.491317 12.927835 10.107554 10.778480 13.085013 11.644351 8.749765 11.437246 13.278610 9.967884 9.050401 8.393253 1.262493 7.322422 11.831676 11.206269 6.721930 8.692354 9.404241 8.832354 11.450651 6.726606 7.429558 9.629445 5.262497 5.553176 6.055057 7.532280 10.574409 10.871677 7.962938 8.199978 11.642496 7.700696 9.523250 10.980909 11.579911 9.963929 11.253818 8.877208 NA 9.817981 8.007678 8.088139 10.871150 5.362035 10.487369 10.502949 7.674312 13.077708 9.809944 10.711352 12.015357 10.819278 10.309623 5.432425 TCGA-BH-A0BC 60 0 NA 974 breast stage iiic t2 n3 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 12 white NA 72.63.0 5 2 1 2 3 2 3 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.396621e-07 2.224912e-07 11.5114527 6.5343963 6.9376375 11.6313649 1.2723219 9.8051446 0.8572644 9.8633565 11.8080631 7.4866211 9.2715970 7.6342455 8.5840500 9.4484748 7.1971144 9.1380350 10.2817804 9.6822230 7.2467159 2.6646194 9.5320449 10.5481352 13.4335911 11.0462651 8.8722144 10.6146542 7.0602041 10.3302934 -0.1427356 3.3597601 8.1193588 11.8072125 11.9579265 7.1240510 11.4305958 12.8256910 10.3370445 6.3860435 3.7317372 6.5530717 8.1503525 9.7716492 7.4963034 13.0810648 4.1302802 11.0896851 13.3883207 6.6473404 9.6285336 9.9640452 7.2351976 6.7480345 NA 14.3627476 11.5901297 0.8572644 8.1564720 NA 5.6985658 9.1511191 10.7142084 9.5047227 10.9803078 9.4239525 10.1701471 4.1051920 10.8345441 9.6832829 6.5897141 7.7255721 NA 11.3301242 15.4549288 7.8571139 10.8860912 9.9826776 9.1083520 1.0796341 4.9865475 7.8307224 9.0162946 11.9414082 0.5942619 6.0924802 7.0828729 10.4044801 11.3338416 4.6298520 6.5154759 6.2723013 10.6551958 11.7183511 2.3597742 13.5632925 5.6816938 7.2524412 12.5216374 12.2789784 12.6408081 8.1349391 10.6282033 10.8497305 10.4205812 11.0644819 4.1549477 8.7681569 12.3241903 10.6914719 -1.7278573 10.1534156 8.8961831 0.2722621 2.5985558 9.4528324 10.8343055 9.2140830 8.8133983 15.3323009 9.4701327 9.8577338 7.4645948 2.3597742 15.6266974 8.8759281 12.4557045 11.6765119 9.5823464 9.8153335 7.8114608 10.5917536 -0.00138580 0.50533000 0.48837000 0.00291330 0.58739000 0.01321300 0.00069327 -0.00207840 -0.00207840 -0.02903600 -0.02903600 0.00833510 0.00360760 0.00360760 -0.00304750 2.14310000 2.96050000 0.00416320 -0.00221680 -0.59711000 0.58184000 0.00055459 -0.59039000 -0.59039000 0.73151000 -0.00027724 -0.00027724 -0.00027724 0.00000000 -0.00138580 -0.00138580 -0.00356530 -0.60960000 0.00097064 -0.61403000 0.00672040 0.04259000 -0.00207840 -0.00207840 0.00903120 0.01419000 -0.00470790 -0.04141600 0.00138680 0.00138680 0.00138680 0.00138680 0.00360760 0.00360760 -0.59750000 -0.59556000 0.00416320 -0.00221680 -0.00221680 -0.59711000 0.00097064 0.00055459 -0.61738000 -0.59039000 -0.59039000 0.00416320 -0.00027724 -0.00027724 -0.00998870 0.01084200 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9052967 13.4065675 6.5669217 9.8502025 3.7857912 11.2838784 1.8572644 NA 8.6581640 8.2118810 -0.7276184 8.1745263 1.9727294 10.6691740 9.4365802 -1.7278573 8.9152559 9.5519122 8.9552962 9.4902594 9.8664537 7.1701474 12.0632610 3.6646194 8.0053169 10.1701471 4.5760807 -1.7278573 11.0227993 2.5202211 12.4352437 12.5341028 8.5285104 10.0976581 9.8814805 9.6043382 3.5577042 1.0796341 -0.7276184 1.8572644 8.6088081 10.0271892 11.8397825 5.1791925 7.0981195 7.0988501 9.6353414 5.9727409 9.4092927 NA 11.9670948 4.2030367 4.2030367 9.6829544 6.5371671 5.5577042 10.1000414 8.8220864 6.9269376 -1.7278573 13.9739601 -0.1427356 10.4012627 NA 7.2863221 6.0137682 7.9796607 8.4321731 14.596546 5.529690 7.989978 11.430596 9.493889 10.822327 13.081065 11.784178 10.840020 10.563185 12.920435 9.899836 9.016295 9.387345 2.664619 7.388646 10.958364 11.040072 7.715245 8.943843 8.582915 7.520229 10.372175 7.711094 8.933189 11.046265 7.881480 3.972739 5.401586 7.600169 10.695155 9.998520 7.154945 8.639717 12.123856 6.370333 9.504723 10.979229 10.227952 10.471054 10.832396 8.630953 NA 8.811974 7.424257 6.898010 11.333842 6.386044 10.709146 10.655196 7.322150 14.096390 10.608250 10.092880 12.199987 10.400618 8.618815 3.130288 TCGA-BH-A0BD 47 0 NA 554 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 2 white NA 56.63.0 5 2 2 NA NA NA 1 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 5.562279e-08 12.3130587 7.1687714 5.9187941 11.0798092 NA 9.2075906 NA 9.9260856 12.2692903 10.0176787 9.9260856 7.7602768 9.6722356 9.9610588 7.8052641 8.9031115 9.2484985 10.3778701 8.0982179 4.1687704 9.8961968 10.7580990 13.6915846 10.8044729 10.8875065 10.9553677 6.6495062 10.7721954 -1.6126375 0.7093789 8.7194480 12.5732936 12.1665153 8.7526406 12.2143573 12.0435012 9.4602140 6.7449630 4.4959381 7.6089984 7.9947421 9.0545232 8.0668916 12.0243760 0.7093789 11.9988976 13.8633983 5.8712276 9.9011392 10.8339780 9.0904499 6.1818281 0.7093789 14.7911460 11.7578988 4.1422991 7.9891822 NA 4.5573366 9.6814579 10.9641321 10.1233906 12.3973277 9.1187306 10.1560095 5.0167682 11.5801667 10.2608557 5.9648399 9.4761998 6.1555954 10.0624866 15.1917569 8.9078337 11.6354874 11.5277621 9.3299261 3.0312717 6.2203009 9.4965894 9.0913150 11.6963194 -1.6126375 5.8792647 7.4042202 10.4409982 11.2988036 5.0456221 6.6635353 7.1085109 10.7289304 11.8690849 4.0878532 13.8151827 5.7183287 6.9761265 12.5179017 12.3345006 12.7462688 9.8961968 10.7989226 10.6213308 10.3372128 11.3861783 5.6190168 7.7968028 12.6007437 11.0949864 0.3873625 10.6252191 9.7267049 2.9109820 2.9765836 10.0531916 11.1435509 10.0856821 9.3077643 15.0955121 10.2531449 10.0882847 7.0240359 7.7093396 15.8857778 8.4668963 12.8960730 12.0320565 10.3233133 9.4722199 7.8282806 11.6610702 1.40020000 2.27530000 2.28290000 0.00458000 0.00458000 0.00583090 0.00041593 0.00708260 -0.68661000 0.62388000 0.62388000 0.62388000 0.00019811 0.00019811 -0.00512270 3.65690000 3.65690000 0.00011452 -0.00421990 -0.00069303 0.00000000 0.00402430 -0.01642900 -0.01642900 -0.01642900 -0.03245000 -0.03245000 -0.03245000 -0.01585000 -0.00373950 -0.68021000 -0.00083160 0.00458000 0.00583090 0.00583090 0.00041593 0.00041593 0.00708260 0.00527490 -0.69812000 -0.00124730 -0.00375990 0.62388000 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00019811 0.00847430 -0.00512270 -0.69568000 0.00708260 -0.00421990 -0.00421990 -0.00069303 0.00000000 0.01474900 0.00541390 -0.01642900 -0.01642900 -0.68085000 -0.03245000 -0.03245000 -0.00304750 0.00652620 -0.00401620 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 8.62820310 13.27872065 8.52696278 10.09088267 4.11069732 10.59534104 0.38736254 -0.02767496 8.65185428 7.70933958 NA 8.05102292 1.84683427 10.70482417 9.10079819 3.81367860 8.89223072 9.50829751 11.65916642 9.92511541 9.88092179 7.64950625 11.38264877 2.55493260 9.27919524 10.15600949 3.67281001 NA 11.07719125 3.14229906 11.78535356 12.52911963 7.64950625 9.94965399 10.04160002 9.28676843 4.45349783 2.19478049 0.38736254 6.59686509 8.37609630 9.03486993 9.19234929 5.66353533 8.23881695 6.42083438 10.34451363 5.90311060 9.70708368 -0.61263746 10.92511533 3.29429725 4.00211740 9.60003573 8.01467163 5.25777628 9.54286240 8.53588810 7.16219896 1.97236181 13.40682858 -0.61263746 10.91317710 -0.02767496 6.88725718 5.19476473 7.91879289 9.06865012 15.117518 7.158901 8.265463 12.214357 10.044730 11.563741 12.024376 12.014033 11.828691 10.834753 13.593816 10.599908 9.091315 9.315930 2.557337 6.875252 11.284690 11.37414247 7.77758081 8.58339873 8.68547417 9.39724015 10.03783066 7.23916028 4.97237559 10.80447293 7.54222941 -0.02767496 8.33139172 8.79115865 12.42898520 10.03261966 8.69915980 9.05806778 12.44447257 6.52183753 10.12339060 10.14396795 10.71972789 10.38459113 10.99958897 8.62462148 2.08783620 9.30669219 7.23406152 6.58708441 11.29880361 7.22976190 10.47154232 10.72893041 7.34741320 13.16615610 10.05939489 9.77327407 13.19677780 10.46355911 9.53015679 2.63533649 TCGA-BH-A0BF 56 0 NA 782 breast stage iib t2 n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 96.50.0 7 2 1 5 1 4 2 3 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 2.224912e-07 11.5926953 7.0709313 7.6266633 11.7051656 0.6238669 10.4084835 NA 9.5881894 11.5980839 8.8964783 9.9022981 7.8037579 8.9670343 10.3758110 6.4247491 9.5449457 9.1106835 10.1086715 8.2031644 6.4312034 10.9656453 10.5809506 12.3363756 10.6848822 9.6764166 10.5787719 8.5337416 10.7359622 -1.3763204 3.4818285 9.6061292 11.5973665 13.1829269 8.1513256 11.7385669 12.2743394 9.1581514 6.6953104 2.7937711 7.1236941 8.7582749 10.5787719 8.4630523 11.8178358 0.1092937 11.4168422 12.9341063 4.8526681 9.4622646 9.9786488 6.3653163 6.2237623 -1.3763204 14.5369584 11.3322815 2.8717845 8.2962738 NA 6.7987738 9.1217003 10.2586597 9.1405335 10.8753310 10.6852197 10.0495890 3.1474044 11.0667921 10.2722061 4.5307387 8.8598627 3.6238435 9.9463400 15.1150127 7.5594559 11.1479005 10.8502608 9.7336792 1.4311950 1.2088294 9.6111126 9.3329323 10.3978119 -0.3761331 6.2088118 7.6434392 9.9435207 11.0353596 5.9988882 8.0501131 6.1395493 10.8655339 11.7103166 -1.3763204 13.4244957 5.0332380 7.4724715 11.8279611 13.7305342 12.9969856 8.0709318 10.4364270 11.1069086 10.3165251 10.8815310 5.2088099 8.9080944 11.9842842 11.4281813 0.6238669 10.5667295 9.1236944 0.9457575 3.9103585 9.1581514 11.1286676 10.6620817 9.2191061 14.7422016 10.7152840 9.7634000 8.5064917 3.7531338 14.4008213 7.4150116 13.4923818 12.4285846 10.0883943 9.5329917 8.1745952 10.3336216 -0.154480 0.628790 0.628790 0.105850 0.076429 -0.135490 0.111550 0.107620 0.540830 0.064368 0.064368 0.480790 0.071104 0.071104 0.098851 0.514030 0.104820 0.000000 0.000000 0.074696 -0.285600 0.273480 -0.335950 -0.324490 0.472970 0.035806 0.035806 0.034113 0.480960 -0.154480 -0.154480 0.031014 -0.311320 -0.135490 -0.145280 0.114330 -0.284180 -0.339870 -0.309410 -0.333010 -0.022332 -0.022332 0.064368 -0.333870 -0.695230 -0.305160 -0.166630 0.071104 0.111990 -0.352670 0.104820 0.000000 0.000000 0.000000 0.074696 -0.285600 -0.029857 -1.292900 -0.335950 -0.324490 -0.020412 -0.399750 0.034113 0.480960 0.027107 -0.325070 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 0.493 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 0.493 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 10.1630074 13.8965877 9.0321783 9.4158254 3.6682440 10.5318659 3.5307450 -0.3761331 8.5216939 9.0118660 -1.3763204 8.1722850 7.2748999 10.4348218 9.4957537 4.7323723 9.8460397 9.8941438 9.8074839 10.2649972 9.1927263 7.5925153 11.0040390 3.7531338 7.5692921 10.0495890 3.6682440 NA 11.3785273 1.9457950 12.9780979 12.1819105 8.4101180 9.8835918 10.9344614 9.7245110 6.6899379 3.7937711 0.9457575 9.8794673 8.7349842 9.3059653 9.3961631 4.6462145 7.8892758 7.2784848 10.3732990 6.8953111 9.9418264 -1.3763204 9.8278082 4.1474125 3.7937711 9.6748739 6.8574685 8.9034592 9.9525234 9.7271363 10.7023330 0.2087669 13.6335897 3.0832815 10.2681555 NA 9.6047022 5.1157033 7.8062428 7.8037579 11.762698 6.238558 8.178437 11.738567 10.475598 10.631577 11.817836 10.550145 9.173633 10.919904 13.515015 11.429592 9.332932 10.355592 -1.376320 7.994536 11.280944 10.943803 6.524716 8.666876 9.011866 7.665508 10.204861 8.758275 6.732374 10.684882 5.208810 2.945776 5.689936 7.439264 12.681671 10.690610 7.934461 8.285626 12.231757 9.197496 9.140534 10.406028 10.310787 9.667559 10.717596 9.040646 8.797526 9.848013 7.758532 9.488035 11.035360 8.921911 10.967312 10.865534 7.193704 13.391671 10.054301 10.690274 12.474524 10.590354 9.578772 5.721881 TCGA-BH-A0BG 73 0 NA 756 breast stage i t1 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 4 4 4 NA NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6.952849e-07 2.781139e-07 12.33448490 4.41754876 8.05800905 11.15703449 NA 11.76991973 -1.66978582 9.57445275 11.30683195 10.17126000 9.65876381 8.48110556 8.93649396 10.08330553 8.99008467 9.44708261 8.95214075 11.25341633 10.02444671 5.45937260 9.69531774 11.67798697 13.14091147 11.30701092 10.34480675 10.89423830 7.40957338 10.27406873 6.81390430 -1.66978582 8.94571860 12.02063252 12.37883113 7.72240659 12.06130179 11.87951253 9.67382969 6.98830067 3.45936604 6.87312047 8.75320471 12.93475788 5.96671423 4.45937260 NA 11.66380326 8.84282928 9.84628128 9.73161365 11.22376957 9.30593679 7.22187225 0.91502366 15.83204339 13.73758897 1.33009942 8.18339818 0.91502366 3.18806854 9.18027569 10.48617193 9.68213222 9.19582199 9.71271287 10.73096824 2.57802089 10.40590219 10.48617193 4.57801485 8.22793453 0.33009942 6.76471770 15.23897396 6.74502753 11.61520201 11.11288235 10.43435999 3.08498267 -0.67001535 8.21578536 9.21273177 10.28210198 -0.08497634 5.00251351 7.51991376 11.06246829 10.92534629 5.12450598 7.31022831 6.85365139 10.50189111 11.91810070 -0.08497634 13.29704483 3.72241138 7.75215381 11.58791859 11.46675960 12.79852196 8.18495714 10.94801542 10.87094338 10.32267314 11.37772401 4.89994415 7.76263052 11.96739297 9.06902542 1.33009942 11.06860337 9.68983832 1.50003717 2.79279290 10.34620067 9.10898725 10.25675546 9.22035317 15.01069560 10.63814336 10.03399240 6.52484570 5.53954348 12.11901103 4.57801485 12.49601647 13.51817537 9.77975333 9.82394436 8.00604607 10.01196854 -0.032996 0.522750 0.521530 -0.428440 -0.034631 0.546470 -0.143470 0.355120 0.314020 -0.444690 -0.444690 2.346300 0.720180 -0.043553 0.404110 0.262160 0.262160 0.649650 0.364110 -0.017391 -0.435720 0.340960 0.070299 0.070299 1.221900 -0.367930 0.326400 0.326400 -0.068797 -0.032996 -0.032996 0.328660 -0.428440 0.567560 0.000000 -0.449330 -0.449330 0.355120 0.314020 -0.478920 -0.439730 -0.467060 -0.444690 0.311610 -1.259700 0.255340 -0.448890 -0.043553 -0.042110 0.404110 -0.450400 0.649650 -0.046583 -0.046583 -0.017391 -0.317000 0.361330 0.500470 0.186310 0.070299 -0.450610 -0.367930 0.326400 -0.472050 -0.042924 0.152840 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 0.590 1.035 0.312 0.312 0.000 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 0.590 1.035 0.312 0.312 0.000 9.21120279 12.92651157 6.54440811 9.34131600 5.00576376 11.26783048 4.43861223 2.85365638 8.75530489 9.60679494 3.75635083 9.14530400 7.29298507 10.92114359 8.95671040 NA 8.32585589 10.88659488 6.65201747 9.02183225 9.60574192 7.48996032 11.36815044 1.65200456 9.28283013 10.73096824 3.33008507 NA 10.27150330 4.93000398 13.21206310 12.49829084 8.01483730 11.01110759 10.55830629 9.04347548 3.75635083 2.50001167 0.65205047 8.56370842 8.00604607 9.88707375 7.39617833 4.08497417 9.28733608 7.19117571 10.65511315 7.38808016 11.60096812 2.57802089 11.19175738 2.33009942 5.27260179 10.17204628 4.87945092 5.75635350 9.62528382 7.60853797 6.93000161 -0.08497634 13.95377032 2.57802089 11.12247245 NA 8.80683507 8.59921550 8.28573881 8.14226638 13.035666 6.948475 8.803795 12.061302 10.310228 10.830184 4.459373 11.458083 9.168213 11.194855 13.484986 12.450084 9.212732 7.608538 3.330085 7.898045 10.456471 10.2317100 5.8378827 8.9658071 9.2286903 8.3894334 9.9115954 7.6920324 5.4593726 11.3070109 4.3744831 3.9448022 4.1114487 8.5977650 13.6210076 11.2634106 8.4254857 8.9234799 8.7647170 7.2784560 9.6821322 10.2689333 11.5640080 10.3604111 10.0974457 8.7895206 NA 8.7422987 6.4367299 7.6743851 10.9253463 5.9225452 10.0694475 10.5018911 7.4397104 14.6834769 10.6169354 10.7045850 13.5987405 10.4674002 8.9475563 0.9150237 TCGA-BH-A0BJ 41 0 NA 660 breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 2 white NA 61.60.0 5 2 3 4 2 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 8.343418e-08 11.5587017 7.5402311 7.4864240 11.3983077 0.1055440 10.0269476 0.5206485 10.3444053 11.8832689 9.3296042 9.3590562 7.3817272 9.5050585 9.1093548 7.4002237 8.8945929 10.2557730 10.0852660 7.3817272 2.4275257 9.4252747 10.2288619 14.2073321 10.5304687 9.7868410 10.8340900 6.3971578 10.5887432 -1.4795526 0.1055440 8.5416202 12.2585212 12.5620426 7.2587328 12.9996624 13.0383710 10.6499231 6.3150553 3.7685655 6.5595591 7.8267016 9.5014937 8.2987174 12.6312050 0.1055440 11.3279950 13.7500222 5.1788501 9.6372309 10.4755634 7.7227638 5.8604911 -1.4795526 14.6572990 9.9764809 4.0442017 7.2954273 0.1055440 5.4395035 10.1721403 10.1293570 10.0631884 11.8614638 7.7780278 9.8632704 1.5206485 10.9508312 10.3109886 7.0904957 9.0510463 -0.4793515 10.8986640 14.9751000 7.9205589 11.5211683 11.3994574 8.6550663 0.8425364 4.4513760 8.6330795 9.1725888 12.6036207 -1.4795526 5.2755286 7.2279990 9.1168297 11.0375712 7.3971569 6.7733054 5.1788501 9.8181296 11.6927550 1.1056110 13.3113449 6.2071413 7.2348854 12.2976899 12.5102120 12.5616147 8.8891465 10.3910048 10.9782774 10.7870929 11.0781038 5.1930660 8.0204861 11.5732081 10.1841982 NA 10.4233920 8.9140305 2.2210728 3.6544470 9.0694621 10.8132493 9.6861752 9.1084176 14.8041083 9.8425681 9.6652983 7.0597987 1.3279747 15.0325934 8.3986911 12.4591170 11.7379920 9.9188494 9.4813662 8.2383164 10.9352170 -0.1087400 0.8404100 0.8404100 -0.1671400 -0.1671400 -0.2813200 0.3236600 -0.0182160 -0.2940200 0.0144700 0.0144700 0.0144700 -0.1179600 -0.2856600 0.3028200 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.0095426 0.0234260 0.0234260 -0.0221950 0.2370500 0.2370500 0.2370500 0.0013868 -0.0349040 -0.1087400 0.0084743 -0.1671400 -0.3073000 -0.2950900 0.3236600 0.3236600 -0.0182160 -0.2940200 -0.2940200 0.3206000 -0.3226300 0.0144700 0.0020805 0.0020805 0.0020805 0.0020805 -0.2856600 -0.2856600 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.0095426 0.0109820 0.0234260 0.0234260 0.0202030 0.2370500 0.2370500 0.0013868 0.0000000 -0.3389400 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 0.000 0.840 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 0.000 0.840 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 8.7470523 13.5819691 5.9800710 10.1667487 2.3964335 10.6027891 -0.4793515 0.1055440 8.7385976 8.0343676 NA 8.3279949 1.3279747 10.1935074 9.0723484 0.5206485 8.7446418 9.4484180 9.7738966 10.5806604 9.6774438 7.8244210 11.1244982 2.7685655 9.3653459 9.8632704 4.7685655 -1.4795526 10.4465654 2.3280035 13.3966773 12.3081346 8.4215069 9.9933309 7.3408186 9.4587495 3.9469086 -0.4793515 NA 0.1055440 8.5786320 10.1689977 10.7473533 5.6186733 6.6912159 6.5595591 9.9188494 6.2210805 9.5650343 NA 12.1161307 4.5206423 3.5206360 10.1888248 6.2496482 5.3408186 9.7614314 8.6486344 7.7349595 -0.4793515 13.7865847 2.2210728 11.0957066 NA 8.9279077 5.6499229 8.2193447 8.8891465 13.249409 5.554064 7.893505 12.999662 9.582410 11.722764 12.631205 12.476925 9.512162 10.880115 13.528894 9.722151 9.172589 9.472653 0.105544 6.921520 11.736931 11.186864 8.024466 8.988246 8.647344 8.492184 10.363701 6.930031 9.285512 10.530469 6.710465 5.824422 4.670387 7.587510 11.298717 10.224544 7.715397 8.904344 13.805464 6.497920 10.063188 10.219779 11.265264 10.114031 10.933739 9.928439 NA 9.592471 7.241739 6.996374 11.037571 7.185976 10.324368 9.818130 7.116942 13.833554 10.522400 10.824135 12.925981 10.501494 9.311803 1.327975 TCGA-BH-A0BL 35 0 NA 1340 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 4 4 4 NA NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.422302e-06 2.081417e-07 11.7924557 7.7475049 7.6828184 11.0299219 -0.7180941 10.3713892 -0.1330525 9.8920408 11.5697954 8.2433882 9.4624696 7.9347836 9.0925103 9.8753299 7.6328782 9.2354078 9.6089299 11.0769637 8.5661846 6.7290225 10.1966975 10.4047667 13.4093689 10.6097720 9.5101561 10.7607083 7.1584552 11.4037944 -1.7178568 4.5673386 9.7444410 13.1491209 12.0592968 8.0517767 11.7809126 10.8084380 10.3497092 6.8479931 3.7413699 8.2448347 9.3753564 8.4304153 10.2538415 6.1523031 1.7413591 10.6828182 10.6509908 9.5534018 9.0818192 10.5914151 10.2178404 4.5298647 -0.7180941 14.0805072 12.0111346 3.6742572 8.1461247 5.1399197 4.7413699 10.9499373 10.2314007 9.6629409 10.4674337 10.0637083 9.9927452 2.3694106 11.7955430 10.1816733 3.8054988 8.4630911 5.1888282 7.0468108 15.3885323 8.2954847 11.3329777 11.1792170 9.3201719 3.1399278 1.0892947 8.5047336 9.9957549 12.1577840 -1.7178568 6.1336868 7.5059401 10.6111745 10.4846748 7.1368066 7.3904631 6.4008794 9.7388065 11.8646688 3.3263360 13.3515144 3.6394869 7.4367565 12.0545626 13.6271360 12.9066200 7.3126062 10.3259912 11.0530155 10.6645168 11.0698413 4.3694037 7.8593677 11.8500136 9.2599341 -1.7178568 10.8254540 9.2769993 2.5298709 4.3158053 10.0521897 11.3560802 10.4559281 9.3132953 14.6910810 9.8998653 10.0250901 6.9076478 1.9823639 11.8660791 8.2791184 12.9570688 13.0642715 10.5916992 10.2394035 8.4618477 10.6512770 -0.109330 1.185900 1.097700 0.374950 0.314980 -0.181160 0.276310 0.832740 0.194510 -0.168660 -0.168660 0.478500 0.965760 0.365100 -0.135360 -0.135360 -0.135360 0.916220 -0.205730 -0.083333 0.229010 -0.181690 -0.055671 -0.055671 -0.055671 -0.049521 0.127190 0.223450 0.399780 -0.050911 -0.109330 -0.180050 -0.233120 -0.251040 0.306010 -0.233200 -0.170060 0.832740 0.194510 0.194360 -0.133030 0.808700 -0.256660 -0.144000 -0.144000 -0.144000 -0.161410 -0.192870 0.371170 -0.135360 -0.142690 0.314340 -0.205730 -0.205730 -0.216510 -0.165350 0.320940 0.413960 -0.055671 -0.055671 0.261690 -0.165160 0.127190 0.718100 -0.395640 -0.164350 0.345 0.345 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.127 0.436 0.436 0.718 0.718 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.150 0.276 -0.161 -0.161 0.000 0.345 0.345 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.127 0.436 0.436 0.718 0.718 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.150 0.276 -0.161 -0.161 0.000 9.4067063 14.5286422 3.1888282 10.2606492 4.4913914 12.0515700 4.7082038 8.1978182 8.9631770 10.1426378 9.1653457 9.2960988 6.6613178 10.5618394 8.8612547 3.6394869 9.6323255 10.3802999 8.3126057 8.8317234 8.7422616 7.7857644 12.0855654 3.5673386 8.5071461 9.9927452 4.5487264 NA 10.7385498 2.6742572 12.5056388 12.1550944 9.4568645 9.4865099 9.6580642 9.2692027 5.1399197 1.8669080 0.2819059 0.2819059 7.6634820 8.6828180 7.3208574 6.4468451 9.0763221 6.5719574 9.8123450 6.2126763 9.7336650 6.7536139 11.3950297 4.2361329 4.9823776 9.9380195 5.8231914 6.3746952 9.5580631 8.6634816 7.6504451 3.3693967 13.0062394 0.2819059 11.0622735 -0.7180941 8.8855652 4.9112937 8.5452078 7.9472746 11.227931 8.556899 8.395681 11.780913 10.134078 10.766006 6.152303 10.395355 8.890193 11.875190 13.928751 10.590562 9.995755 8.458112 1.603881 7.353401 10.946386 11.4463743 5.6306676 8.7321189 9.2324946 8.7238456 10.4388024 7.7717866 7.4468459 10.6097720 9.6139752 0.8668684 9.2193125 9.2648681 13.1418617 10.6523537 7.8650218 8.5369671 10.4671239 7.8631393 9.6629409 10.1266445 12.2048947 11.0259316 10.4637122 9.1021177 2.1888440 9.3158298 7.9003240 8.2987472 10.4846748 8.4099331 10.3338919 9.7388065 7.4889528 13.2586818 10.0534282 10.3115710 12.7458462 11.3053465 9.5089529 3.7737959 TCGA-BH-A0BM 54 0 NA 1876 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 3 white NA 61.60.0 8 2 2 2 2 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 2.224912e-07 10.6823908 8.5241613 6.7921786 10.8455899 0.9341768 10.6317447 NA 9.2636206 11.0609024 9.7188329 9.5525834 7.8767122 8.6183620 8.8470874 6.4989832 8.8127597 10.1970759 10.0548679 7.5241609 2.1565908 10.8811042 10.6552972 13.1611118 11.2829261 9.9066991 10.5359688 5.4785189 10.6700360 -0.6508612 -0.6508612 8.2470811 13.0203342 13.3508196 8.2770135 12.7027958 13.5207250 9.9703715 7.0771554 1.9342145 7.5684038 9.0686243 11.0604722 8.3743749 13.1096435 -0.6508612 12.2126474 13.9596836 6.7754997 9.5216629 10.4024826 10.1346879 9.3881544 NA 14.5971481 8.8688716 3.3492379 8.6346376 NA 3.9930946 9.0737493 11.3926045 8.7415529 11.2733056 9.2196001 10.0435933 4.9341957 10.9667029 9.7307783 6.7329394 7.8209103 7.2740482 10.1240225 14.6182890 7.3517688 10.6369478 11.0176773 8.2770135 2.5191644 4.2561275 7.9930918 8.9285512 12.2666075 1.3492520 5.2072174 7.1371377 9.5452228 11.4502262 5.3936290 5.1305932 4.2561275 10.1541731 12.0459857 0.3492520 13.6552259 6.2072174 7.2976023 12.3028863 12.7462415 12.5921118 8.0002874 9.8158218 11.0570259 10.8644720 10.8752455 4.1565908 7.9639451 12.0315717 11.0928076 NA 10.3428815 8.6507315 -0.6508612 3.9942448 9.7144643 10.0101227 9.9152895 8.7001747 15.2356465 9.7796880 9.7166502 9.0686243 3.8727992 15.3847219 9.5562497 13.2492531 13.3316052 9.3520505 9.6334812 8.0427226 10.0651975 -0.00401620 0.62028000 0.64176000 0.00124810 0.00124810 0.00694350 0.00000000 -0.00124730 -0.64818000 0.00402430 0.00402430 -0.00512270 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00249380 -0.00346270 -0.00346270 0.00736090 0.00489100 0.00013863 -0.64800000 -0.00664320 -0.00664320 -0.00249380 -0.00249380 -0.00249380 -0.00083160 -0.00401620 -0.00263220 -0.00595220 0.00124810 0.00694350 0.00694350 0.00000000 0.00000000 -0.00124730 -0.64818000 -0.64818000 0.00285070 0.00624810 0.00402430 0.00360760 0.00360760 0.00360760 0.00360760 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00346270 -0.00346270 -0.00346270 -0.00066590 0.00489100 0.00013863 -0.69676000 -0.64800000 -0.00664320 -0.03776200 -0.00249380 -0.00249380 -0.00083160 0.00103520 0.00402430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3034319 11.9717449 5.4366982 10.1646187 3.7415533 11.0885941 3.0496830 0.3492520 8.6935312 9.8430908 -0.6508612 8.2964923 5.5971617 10.1460862 9.2455679 2.3492237 8.2651148 9.4206978 11.1630166 11.4801277 9.5221128 7.3150200 11.4380237 1.0182781 9.2990621 10.0435933 3.6711688 NA 10.4557984 3.9341957 14.0790155 12.1519537 7.9114777 10.0119038 7.3034319 9.3019767 4.3034301 1.6711575 NA 0.3492520 8.5166534 10.7012789 11.2440532 7.1371377 7.3207789 7.8490810 10.0444638 5.9785915 9.7045865 -0.6508612 12.6233223 2.1565908 4.5971617 9.9612561 6.4078762 5.0216618 8.7199230 7.8450904 8.0805543 NA 14.8204661 1.9342145 10.3569636 NA 8.5166534 6.9190910 8.0322298 8.0565944 12.429798 3.808663 8.884511 12.702796 10.423377 11.069052 13.109644 11.563858 8.909568 10.040979 13.235504 10.584651 8.928551 8.991287 NA 7.426051 11.072043 10.702382 5.279973 9.009231 9.124023 6.857030 10.238998 6.130595 6.841089 11.282926 7.483662 5.207217 6.926665 5.738803 11.137138 10.282926 8.320779 9.188439 10.592409 6.035736 8.741553 10.915765 10.715558 9.717742 10.404518 8.366044 NA 8.705093 8.438368 6.724275 11.450226 6.231878 10.301249 10.154173 6.949149 14.938857 10.405196 11.596570 12.525253 10.151752 9.512885 2.808673 TCGA-BH-A0BO 54 0 NA 1085 breast stage i t1b n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 8 2 2 NA 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 5.562279e-08 10.57430155 9.72507445 6.43870205 11.12640932 2.18535913 11.25125859 0.69990693 9.68349856 11.51819746 10.25567433 9.71562864 7.12955092 9.66629609 9.80007157 8.57153196 9.10677753 10.40037462 10.26903092 7.99455540 4.56783138 10.67434942 11.37430372 13.02686988 9.79322044 9.20137411 10.38573484 5.18536310 10.32527847 -0.62193235 3.58746101 9.47669680 13.20782858 12.18132059 6.79163437 12.63877933 11.92983519 11.15011511 6.15936681 3.80427044 7.12619957 8.95920736 10.01236405 8.30874402 11.61790361 0.96295614 11.09053378 11.52759512 6.95165423 9.43155255 10.17971518 10.16998361 7.35528678 -1.62193235 13.92960779 11.76696310 2.77032164 9.30133431 -0.03696985 5.48653097 9.76925040 10.76090096 10.75738518 11.78620382 9.27206659 10.87884862 2.90157169 11.64523236 10.20097582 6.26065049 7.67032837 2.37801214 9.66860173 15.30193773 9.22490754 11.46314725 11.16815160 8.42376639 2.83743871 1.18535913 8.11440867 9.25221978 11.81133138 NA 4.48653419 7.19818570 9.70049833 11.16509310 7.11947342 6.60682565 4.37800520 10.31795318 11.57184008 -1.62193235 13.52135012 5.84561299 8.50083471 13.40794099 11.32765110 12.93331487 7.74869402 10.03219522 10.73363312 10.64015445 11.71311793 4.99271859 7.58746026 11.49986402 12.20395931 -1.62193235 10.76844447 9.57951809 2.90157169 3.87017728 9.27887361 10.43328915 10.02050984 9.77514654 15.27352288 11.13456307 9.81367699 8.40453021 2.69992914 15.90676609 8.42921590 14.20025393 13.91404145 9.36455996 8.74869402 7.88975947 10.19258921 0.00624810 0.00624810 0.27695000 -0.00041585 -0.00041585 -0.00290910 -0.00027724 0.00444110 -0.06369900 0.00000000 0.00000000 0.00000000 0.00249690 0.00208050 -0.00035548 -0.00035548 -0.00035548 0.00013863 0.00013863 -0.00069303 0.00208050 -0.00063764 0.00027728 0.00027728 0.00027728 0.00263570 0.00263570 0.00263570 0.00430210 0.00624810 0.00624810 0.00694350 -0.00041585 -0.00290910 -0.00290910 -0.00027724 -0.00027724 0.00444110 -0.06369900 -0.27698000 -0.00041585 -0.00041585 0.00000000 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00499690 -0.00035548 0.00013863 0.00013863 0.00013863 -0.00069303 0.00208050 0.00332990 -0.19450000 0.00027728 0.00027728 0.00360760 0.00263570 0.00263570 0.00430210 0.00430210 0.00541390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9834862 13.1598275 8.3116975 10.5638114 2.1530595 10.8860491 2.0784391 2.2848990 8.4760390 8.3751863 NA 9.2351869 4.7355601 9.9727979 9.6840685 3.0218706 10.5938431 9.5479317 11.1478446 9.8552591 9.5436801 7.8976428 12.1907857 4.9629700 9.0845028 10.8788486 7.6749231 NA 9.9402491 4.0218617 12.7465132 11.9375034 8.4278555 9.9639083 7.8374381 9.1560838 5.0218617 1.9629561 1.3780121 4.1593628 8.6128243 9.4554902 9.5207520 7.1461909 8.0308878 5.6817866 9.9000979 6.3836317 9.3920271 0.6999069 12.3794150 5.2728257 5.2108953 9.4505615 5.7670562 5.0504320 9.6971144 8.7863366 7.7021872 1.9629561 13.5237399 -1.6219324 10.4447687 NA 9.2140570 5.7355601 7.6424496 8.9713978 12.416685 4.132898 7.940249 12.638779 9.807644 10.415211 11.617904 12.327925 8.756302 10.680074 14.462857 13.153720 9.252220 8.507290 -1.621932 7.514998 11.488653 12.084071 7.604419 9.959207 8.499540 7.720081 9.581814 6.394814 7.468119 9.793220 5.947862 3.837439 5.050432 5.153846 11.984990 10.489142 8.340903 8.569066 13.022708 7.257590 10.757385 10.303932 11.066476 10.535038 10.375892 9.513075 NA 9.390743 9.315587 7.630672 11.165093 6.640102 12.385473 10.317953 7.637750 13.850158 10.006452 10.367756 13.691209 10.013271 9.570916 2.547943 TCGA-BH-A0BP 76 0 NA 1481 breast stage i t1c n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 8 2 4 NA 3 2 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.330268e-06 8.325669e-07 11.284235280 9.272291756 6.993018751 11.312104631 0.589284107 9.947582005 -0.995678394 9.602387098 11.364632999 7.967230871 8.730552672 8.471940158 9.140043933 10.475501710 5.133616952 9.066380661 10.029474144 9.399868769 7.701302303 4.430599741 10.205233165 11.256704345 13.429091386 9.170497708 9.337489890 10.502186474 5.874698619 10.152143735 0.004321606 2.911231380 9.723723394 12.446111638 12.607497278 8.890031055 11.616511995 13.483925411 10.503183834 6.317217226 2.811697076 7.032240829 8.189209800 9.550264267 8.364084302 12.491797817 -0.995678394 10.908592873 12.550505595 5.970119699 9.047320803 11.057921143 10.951240851 10.148992809 1.326249701 13.739383888 7.896118027 4.396652728 7.834057618 -0.995678394 4.676758229 9.681173217 9.290892266 9.007149519 11.354445053 10.713849237 9.978749207 4.911226585 11.356653944 10.628673091 6.732255630 7.289736733 NA 11.448314107 15.122221151 8.967924233 10.570388643 10.207682541 8.199091224 1.589284107 4.811691939 8.422187159 9.435832125 11.844325663 0.004321606 4.886979283 7.655386178 9.066380661 11.086816335 6.739044732 4.619043192 5.194157987 9.762557776 11.443386290 6.981614087 13.471558016 6.048728801 7.484114763 12.640052700 12.921520162 12.769931500 7.856083723 9.482092783 10.600990278 10.558870672 11.148992809 4.289738577 8.434787082 12.096596210 10.503183834 1.326249701 10.890793295 9.071768836 2.326249701 2.053980168 9.931371777 10.033621771 10.274045660 8.943913710 15.296098854 10.629586850 10.264666142 7.633691302 4.589296093 15.526808847 9.442086745 12.427450507 12.012062714 9.285105326 9.938762582 8.539609777 10.236605623 0.0294200 0.1197600 0.5987200 0.0675180 0.0718220 -0.3261200 1.1057000 0.4337800 0.0346770 0.0294660 0.0294660 0.7543300 0.2526100 0.0968160 2.1085000 0.0000000 -0.0850590 -0.1253800 2.4469000 -0.3131900 -0.3299500 2.9895000 -0.3371000 -0.7888100 0.2906700 -0.0974950 0.0794470 0.7698300 0.5232800 -0.3861600 0.0294200 0.0529520 0.0675180 1.5482000 -0.3739200 -0.3364100 -0.3293600 0.5128100 -0.7392300 -0.7788000 0.4880200 0.2669800 -0.3552100 0.0696690 -0.3246100 -0.3498500 0.0274960 0.0685860 -0.3317900 -0.3437700 -0.7210100 -0.7510600 -0.1050000 -0.1568800 -0.3347500 -0.3299500 -0.3461800 -0.3454100 -0.7703100 -0.7888100 -0.3264600 -0.8442700 -0.5270600 -0.1894900 0.4567400 0.0043021 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 8.658970483 12.848844218 6.488150240 10.877009451 3.130321384 10.344184594 1.326249701 1.589284107 8.451418021 9.388038818 NA 9.238325676 3.648189303 10.191686632 8.946848975 0.004321606 9.568484017 8.906709646 10.623178897 10.143246336 11.365340739 7.865421504 12.545915246 2.463753225 8.091797668 9.978749207 6.405214660 3.091801369 11.752107972 3.396652728 12.144365468 11.983938430 7.932112564 9.959984550 8.174259593 9.154081640 9.141325748 2.004321606 -0.995678394 6.745802035 8.805234406 9.492174661 9.782411678 6.422187579 8.434787082 7.043253721 9.946115865 7.169241563 9.640052745 1.589284107 10.923942840 1.589284107 4.704772389 9.933119364 5.661974718 3.759219763 10.028781712 9.236755446 6.252262368 1.326249701 13.885305117 NA 10.764222813 NA 8.443126309 5.798750431 8.040508369 8.606105353 12.106098553 5.213786634 8.240348679 11.616511995 9.515098787 10.761724578 12.491797817 14.885305117 8.754204064 10.364633054 12.742954673 10.804830091 9.435832125 7.593048944 0.004321606 6.929147132 11.332448480 11.3953096 6.9052017 9.0183552 8.8245136 6.8869781 10.6551216 6.1232751 8.3793740 9.1704977 6.9758778 NA 6.9986886 6.4004252 11.3447411 10.9869717 7.9556191 8.6061054 11.2119590 4.8869793 9.0071495 10.0391336 10.3374899 10.5930492 10.7621412 8.5021866 2.4637532 8.9517379 7.7922372 5.0043351 11.0868163 7.5589235 10.9433995 9.7625578 7.2668990 13.8128966 10.0183550 9.8762399 12.2466155 9.8885051 9.7073729 0.5892841 TCGA-BH-A0BQ 39 0 NA 827 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 5 2 2 NA 2 4 3 3 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.39057e-07 10.9945048 7.1858289 6.1858289 11.3726102 0.4854268 9.9805783 -1.0994326 9.2513662 11.5834216 8.8647681 9.5279610 7.4778562 8.3203872 9.0640766 8.5781466 9.4161270 9.9671889 9.6112334 7.1765512 3.3598585 9.5415756 11.0287437 12.5260218 11.0060083 9.2700245 10.2770951 6.7333177 10.4933512 NA 4.6817866 8.3329688 12.1833707 12.5132956 7.9825761 13.4810978 12.9199309 10.8680136 7.6519708 4.8073189 7.3491627 8.0902517 11.0631331 8.3619065 12.5819949 1.4853753 11.2067736 13.9193661 5.9004273 9.4333868 10.2178397 7.9958242 8.8719705 -1.0994326 14.1875143 9.5973947 2.3598585 9.1208055 NA 4.6008644 9.5514787 10.2645618 9.3812172 11.2792638 9.3245933 10.2178397 6.7206054 10.4516547 9.8103202 6.5224795 8.9004270 9.5433812 10.9060516 15.3884241 8.0022975 10.4679078 10.9053498 9.9359135 3.3598585 4.5151384 8.7333171 8.7348982 11.5708620 NA 6.3516389 7.3392194 9.3098181 11.3061004 6.8252399 5.8546241 4.7077843 9.9718894 11.7742556 1.4853753 13.6229144 7.0602982 7.2623711 12.7042555 13.5998911 12.5395416 8.8531682 10.7001134 11.0890159 10.5021978 10.6385194 4.5728533 8.9269506 12.0033870 10.8604290 -1.0994326 10.4588478 8.8961943 1.7077898 3.4321176 9.5178945 10.7400246 9.9718894 9.0386987 15.5155250 9.8363288 8.9945048 6.6283478 3.5442875 15.0157959 10.5021978 13.6748538 12.8571662 10.0469957 9.8553503 7.6915900 10.8015353 -0.00027724 0.78929000 0.78929000 -0.00206200 0.00221930 0.00583090 0.03881200 -0.00553750 -0.41091000 -0.00097017 -0.00097017 -0.00097017 -0.00069303 -0.00356920 -0.00041585 -0.00041585 -0.00041585 -0.00346270 -0.00346270 0.00416320 0.00166420 -0.00401620 0.01056400 -0.00678130 -0.00678130 -0.00719580 -0.00719580 -0.00719580 -0.00456950 -0.01880300 -0.00027724 0.00035653 -0.00206200 0.00221930 0.00583090 0.03881200 0.03881200 -0.00553750 -0.41091000 -0.43550000 0.00180300 0.00180300 0.00221930 0.00166420 0.00166420 0.00166420 -0.01207800 -0.00356920 0.00458000 -0.00041585 -0.00041585 -0.00346270 -0.00346270 -0.00346270 0.00416320 0.00166420 -0.00401620 -0.41597000 -0.42669000 -0.00678130 0.06952500 -0.00719580 -0.00719580 -0.00456950 0.00458000 -0.03108600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2579792 14.3130631 7.9116544 9.9414017 3.7529305 11.2019233 3.0703550 2.0703550 8.8560769 9.1765514 0.4854268 8.3761606 1.4853753 10.2557782 9.1625220 1.9004128 8.8207799 9.0527118 10.0988721 10.4215367 9.7315522 6.4550165 11.0014178 2.6008644 10.1950478 10.2178397 7.4200630 NA 10.6743904 2.4854011 13.7185598 12.5815556 8.4042526 10.1334474 9.1074415 9.4347300 3.4239949 1.4853753 -1.0994326 9.6735663 8.9018353 10.1530926 9.4249687 5.4853882 7.7302446 7.7891704 9.7158103 5.8891109 9.7646132 NA 10.8028022 3.3598585 2.9878847 9.9056095 6.3959625 5.5297835 9.2873672 8.1292459 7.8834204 -0.0995872 14.4155417 0.9004128 10.1846728 NA 9.7761764 5.5869268 7.4357028 9.0939523 12.760738 5.423988 8.759962 13.481098 10.332969 11.182067 12.581995 11.996977 9.393282 10.555510 13.506254 11.489142 8.734898 9.426926 1.485375 6.586927 10.846968 11.318016 7.008952 9.277638 9.145980 8.070352 9.787107 7.014169 7.710999 11.006008 7.631746 -1.099433 8.985235 6.226676 12.349834 10.466957 8.462345 8.643578 11.896724 5.641893 9.381217 10.376160 10.080336 10.138832 10.509606 9.012867 -1.099433 9.479319 7.173196 6.922795 11.306100 8.050174 10.396782 9.971889 7.222355 14.465946 10.103775 10.494285 13.222707 11.027777 9.057774 2.359858 TCGA-BH-A0BR 59 0 NA 1633 breast stage i t1c n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 6 3 4 NA 3 2 1 2 3 4 1 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 1.24885e-06 2.42832e-07 11.988362 7.275525 7.473157 10.513956 NA 10.061600 NA 9.855818 11.621824 7.083451 9.368385 7.214299 9.189061 9.556925 6.716308 9.718515 10.768355 10.339047 7.695549 5.969494 9.968259 10.490907 14.596754 10.595053 9.140517 10.741843 6.092552 10.831559 NA -0.220278 9.001257 12.198050 12.999595 8.959579 12.525344 13.089928 10.801344 4.027596 1.364628 6.527863 7.843065 9.112825 8.460908 12.410165 NA 10.535392 12.720718 4.802038 9.849872 9.699278 8.707448 8.322702 -0.220278 14.183121 8.786697 3.101600 7.818589 NA 5.271523 10.163374 10.575304 9.396219 10.030561 10.438774 9.745454 1.364628 11.237564 10.242683 6.774024 8.590242 -1.220278 10.802038 15.265484 7.591623 11.137497 10.753726 8.193298 2.867126 5.768354 8.008489 10.051133 12.285854 1.587029 7.159049 7.476638 8.852473 11.331859 7.622020 6.326564 6.364632 9.735320 11.212212 1.364628 13.302129 6.969495 7.132816 12.437770 14.537659 12.664127 8.606219 11.072279 10.890153 10.303952 11.207507 4.612559 8.500769 12.469341 9.075439 1.101583 10.681668 8.341912 -0.220278 2.588061 9.625160 10.654267 9.897313 9.268514 14.855692 9.759810 8.733866 9.070841 2.587029 13.830411 10.593451 12.931876 11.957712 9.952097 9.469668 7.969495 9.911746 0.0107030 0.0107730 0.0102850 -0.5301200 1.0851000 -0.5089500 3.6569000 0.0056919 0.0062481 -0.4923500 -0.4923500 -0.4923500 0.0063871 0.0237060 0.0081959 1.8817000 1.0757000 0.0324220 0.0324220 -0.5085700 0.0228650 0.4299100 -0.4017400 -0.4017400 -0.4017400 -0.0067813 3.6569000 0.0016642 0.0084743 0.0000000 0.0107030 -0.0095426 -0.5301200 -0.5325600 -0.5273600 0.0087528 0.0087528 -0.0182160 -0.5141400 -0.0228810 0.0231450 0.0231450 -0.5241600 -0.5147600 -0.5147600 0.0147490 -0.0156040 0.0237060 0.0237060 -0.5246100 -0.5214300 0.0324220 -0.5021400 -0.0045695 -0.5085700 -0.5276700 0.0195030 0.0036076 -0.5312400 -0.4017400 0.4864700 -0.5209200 -0.5112500 -0.5275500 -0.5400700 -0.5535300 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 8.9458330 14.5099544 5.8881953 10.3222183 3.0943712 11.9033065 0.7796379 0.3646845 8.5092909 8.9115271 NA 8.6528833 1.9496096 10.6741089 9.0335174 1.3646285 8.8868872 8.7497759 8.6515752 9.8484483 9.5126429 7.7512133 11.3798153 2.6865678 7.4556272 9.7454543 4.3032328 NA 10.2997976 2.1015828 12.3386886 13.4912295 8.4818426 9.6407570 8.5773314 8.9483421 4.7569485 2.5870289 -1.2202780 5.5345566 8.5312142 9.6638406 12.0173282 4.5870229 9.5840269 6.6985338 9.6235911 7.1195201 9.2874647 0.3646845 10.6661287 3.8671354 3.2391078 9.7249091 7.3103492 2.8671255 9.9256022 8.7583805 7.4835740 2.5870289 13.6313703 0.7796379 11.1786809 NA 7.2226133 5.4520946 7.8855786 8.6172981 11.595273 10.412211 8.253376 12.525344 9.822697 10.638428 12.410165 10.250329 10.404465 10.941432 12.892842 9.177345 10.051133 8.892110 -1.220278 7.180550 10.878689 11.730226 5.845758 9.100470 8.495632 8.261470 10.714179 6.606219 7.971963 10.595053 8.967022 3.867135 5.364632 7.773882 12.088151 10.293398 6.949596 8.495632 10.683928 4.989125 9.396219 9.932589 11.091135 11.096234 10.785996 9.021653 8.018075 9.291699 8.838203 4.239100 11.331859 8.671454 10.586932 9.735320 7.692560 13.680018 10.396219 9.670694 13.054412 10.605424 9.018075 2.480110 TCGA-BH-A0BS 55 0 NA 1641 breast stage iiia t3 n1c m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 5 3 2 2 2 4 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 1.112456e-07 10.4464393 5.7213617 7.4706646 11.0324054 -0.0424568 10.1908152 NA 10.2259420 11.9300961 8.5121838 9.6945606 7.9175970 9.0722050 8.8361567 7.4360277 9.5211091 10.2697216 9.3041087 6.1928116 1.1799568 9.0730723 9.5686197 14.1541971 10.6101412 9.5475582 10.3129460 1.1799568 11.0049461 -1.6272707 0.9576175 6.8644858 12.2091760 12.2760436 7.1408165 13.4259220 12.1926119 9.6300203 7.5500518 4.6394174 4.6014529 7.7323818 7.9079079 5.9117922 12.9389244 1.1799568 11.2562304 14.4022648 8.0056279 9.5833038 10.3722802 6.0379686 6.0019891 -1.6272707 14.3071674 7.7011955 -0.6272707 7.7606494 -1.6272707 4.9725456 9.9424881 10.6446790 10.7304594 12.1397824 10.5842166 9.4713226 -1.6272707 11.5970864 9.4732948 5.6394203 9.1515308 1.1799568 11.5544059 14.5409716 9.4970640 12.1413337 11.3432777 10.1090344 -1.6272707 7.5649253 7.1275198 9.1098797 11.9107001 NA 5.6855141 7.0164885 8.1124129 11.0626305 3.9873391 3.7301834 3.6205630 11.1556307 11.5315576 2.7649406 13.7273984 6.0730726 7.1832036 11.3111094 12.3819362 12.8781959 7.9079079 10.6367818 11.1047999 10.7473677 10.9224172 4.9272233 8.4640678 12.0021029 9.5306110 -1.6272707 9.8176472 8.7124826 -1.6272707 1.6959938 9.6110372 10.4404030 10.1803898 9.2275009 14.8164664 9.4367015 9.5166532 7.0485893 2.8320596 16.6700190 10.3459711 12.1024656 11.1684692 10.1999752 9.0326285 8.2445375 10.2557607 0.00305220 0.64156000 0.64286000 -0.00152430 -0.00794540 -0.00055444 -0.00055444 -0.00249380 -0.00733390 -0.00027724 -0.00027724 -0.00027724 0.00277450 0.00277450 0.00249690 0.00249690 0.00249690 -0.00235530 -0.00235530 0.00013863 0.00555290 0.01000600 0.01014600 0.00680440 0.00680440 -0.00037427 -0.00037427 0.00208050 0.01363200 0.00305220 0.00305220 0.01056400 -0.00152430 -0.00055444 -0.00581400 -0.00055444 -0.00055444 -0.00249380 -0.00772360 -0.00733390 0.00000000 0.00000000 -0.00027724 0.00499690 0.00499690 0.00499690 0.00499690 0.00277450 0.00277450 0.00249690 0.00249690 -0.00235530 -0.00235530 -0.00235530 0.00013863 0.00555290 0.01000600 -0.71433000 0.01014600 0.00680440 0.00485790 -0.00037427 -0.00037427 0.01363200 -0.00065496 0.02193400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.5966341 11.7257793 3.0164963 8.7279834 1.7962240 10.7745786 NA NA 8.1308557 6.9613467 NA 7.0521126 1.6945682 10.7700397 8.3570509 -1.6272707 6.5121842 9.4367015 10.8394736 9.9730101 10.4844105 7.1864134 11.2646060 2.8320596 8.6510818 9.4713226 5.2306142 NA 9.4889765 2.3726457 12.8385177 12.7817582 8.2780196 10.5796468 7.3033698 9.0441736 1.1799568 2.3726457 NA -1.6272707 8.7268820 9.4521173 11.8634834 4.2552741 6.7669237 6.6487573 10.3873504 7.1241761 9.9725453 NA 12.3042010 1.3726178 4.1005488 10.1900639 8.4507700 0.6945682 9.2165536 6.6945599 8.5599846 -0.0424568 13.4906407 -0.0424568 9.9664905 NA 7.3210000 5.9424887 7.5550270 9.0128773 13.1774189 4.9117922 8.5550270 13.4259220 10.1486541 11.0937316 12.9389244 12.4733769 9.5249174 10.9997103 13.3015672 8.6026528 9.1098797 8.8051744 -0.6272707 6.5425568 11.0173901 10.8569519 8.7345762 9.0661193 8.4279149 8.6649542 10.1466536 4.4170288 7.6394189 10.6101412 5.1141005 0.6945682 4.8961943 6.7659802 10.1670484 9.5280833 7.8051744 8.6098425 13.3797912 1.3726178 10.7304594 10.3059543 11.3692825 8.8804272 10.8762098 10.3391379 NA 9.5126058 8.3899561 1.8320799 11.0626305 8.3180764 10.5309265 11.1556307 6.5624577 13.5944461 10.4521173 10.8991317 13.5077806 9.5655418 9.1983864 1.1799568 TCGA-BH-A0BT 56 0 NA 1386 breast stage iia t1c n1mi m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 96.50.0 5 2 5 2 3 2 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.230962e-07 8.343418e-08 11.6437290 4.2896279 5.3853896 11.8200945 -1.3827015 9.4813916 1.4245459 8.3159103 11.0727896 8.5684901 9.5538435 7.7257303 8.6157959 8.6073096 5.7464874 9.7211489 9.1329053 9.1669900 6.6886685 3.0095263 9.9742076 9.6533791 12.6515746 10.5315906 9.5188266 10.5323379 6.2610625 9.9215568 -1.3827015 3.1407623 7.1908529 11.1070534 12.9209149 6.2171182 13.9333102 12.6174696 9.1397869 7.1368415 2.5240888 8.1851614 8.2483826 9.5531072 7.0223467 13.5315906 -0.8567372 9.6277336 13.4785832 6.4998491 10.7976120 11.2316853 9.2700505 8.9118264 -0.3827015 15.1503150 9.1378242 1.9391513 9.1717943 NA 2.3176514 9.0507909 10.1368417 10.0122040 9.8910011 8.7283413 9.4844842 1.2021983 10.8962357 9.8020809 6.0095219 8.1984062 11.5597200 11.1027832 14.0251371 5.7636984 11.3198111 10.6622825 9.4697350 2.9391325 NA 7.5916203 8.3870432 10.1884841 -0.3827015 4.7257303 7.7126027 9.0735600 10.5772074 5.1717953 5.5479433 4.0095263 10.0019892 11.7214766 2.4245728 13.4670992 7.2282300 7.2538305 11.7930669 12.3614086 12.5800111 8.7995999 11.2344434 10.7602698 10.1602567 9.5894673 4.1090596 9.6009116 12.1250001 11.6191414 NA 10.2860905 8.6157959 -0.3827015 4.3475735 8.9323550 11.7160601 10.2337544 9.4277771 15.3939212 10.1180474 9.6533791 7.4937226 2.0766275 15.1192759 9.0340030 14.5922252 13.1805210 10.7500265 9.9670396 8.2896307 10.8062115 -0.065581 0.596020 0.602860 0.279160 0.263170 -0.133420 -0.543300 1.022600 -0.536620 0.862950 0.862950 0.645610 -0.117000 -0.117000 0.299950 0.299950 0.299950 0.190260 0.190260 0.742900 1.012000 -0.512800 0.260370 0.260370 0.260370 -0.161540 -0.546530 0.229470 0.338040 -0.548340 -0.065581 -0.106700 0.279160 -0.133420 -0.133420 -0.543300 -0.543300 1.022600 -0.536620 -0.536620 0.286980 0.306650 -1.045500 0.277580 0.277580 -0.530530 -0.535120 -0.117000 -0.098814 0.215760 0.299950 0.190260 0.190260 0.190260 0.219830 1.012000 -0.493400 -0.533990 0.282470 0.260370 -0.132380 -0.551560 0.229470 0.338530 0.230250 -0.553370 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 8.5360688 12.3957960 8.9955003 9.8869167 1.8219551 11.2454232 3.3176514 0.6172044 9.1832595 8.2429145 0.2021356 7.0848116 1.7871399 10.6347099 9.0138103 1.7871399 7.0009093 9.1388060 8.3314508 12.2429143 8.9879691 7.3451258 10.2619631 NA 10.1170514 9.4844842 3.1407623 NA 10.9667632 4.7464901 13.3814033 12.2171183 7.5508960 8.7808550 10.3015159 10.3310216 7.7073177 0.2021356 -1.3827015 8.0868474 10.8101147 10.2785382 10.7263832 3.9026042 8.4181377 7.9095271 10.9198444 4.9209840 9.8375838 0.2021356 11.2358204 1.4245459 3.9391325 10.4780015 6.2232044 2.6172044 8.4611266 6.8412070 5.7152372 0.9391513 13.7939630 -1.3827015 9.9514788 NA 10.2479276 4.3451267 8.0642885 9.9786011 12.245354 5.009522 8.736147 13.933310 10.640960 11.283651 13.531591 10.646148 9.077661 10.433389 13.117363 10.046612 8.387043 8.938006 -1.382702 7.175626 10.955385 10.237425 7.187061 9.009523 9.585152 7.620020 10.398700 6.391993 5.076636 10.531591 6.925545 3.475189 5.261061 6.666836 10.709632 9.803320 9.433389 9.270946 8.301954 5.303708 10.012204 11.778337 9.287862 8.843618 9.876360 7.499848 NA 10.007235 5.594486 4.902609 10.577207 6.140768 9.923267 10.001989 6.324564 14.061282 9.878125 11.059890 12.869132 10.751311 8.640960 2.317651 TCGA-BH-A0BV 78 0 NA 1519 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 2 white NA 47.68.0 5 5 3 NA 2 4 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 5.284165e-07 1.39057e-07 12.0397018 4.0775934 7.2180759 11.3743022 0.2031385 10.2821657 NA 10.0439033 11.9245095 6.9081812 10.0734901 8.2217891 8.9150793 9.1870690 7.3116502 8.6111012 10.0857684 10.2397570 7.0444280 -0.3817613 9.6096848 9.4462995 14.1194092 11.2057061 9.0328483 11.0711763 6.5370258 10.5893400 -1.3819493 NA 8.5621428 11.2461527 12.4059635 9.0339047 12.5786174 13.3731548 8.8837781 6.0775955 2.6181682 5.7880879 7.9219439 8.2817210 7.3995223 13.2583514 2.5250415 10.7836981 13.9513882 1.4255130 10.1818930 10.3917142 5.5954440 6.6405313 NA 15.2257929 8.7302636 2.0775848 7.5008060 NA 5.0611065 10.7204668 10.1631273 10.6628985 9.6639226 10.2923552 9.7161949 0.6181447 11.6477952 10.3566774 6.5008052 9.2781588 2.3186061 11.2529740 14.9428006 8.2307919 11.8745190 11.5227975 9.2817210 0.2031385 3.2031228 8.9173709 9.8989337 12.1553813 -1.3819493 6.6405313 7.7855813 9.5377711 11.0112852 4.5488990 6.4761435 5.0611065 10.4291362 11.8196743 3.5250541 14.0092386 7.8541771 8.0816874 12.0963005 12.1445399 12.8913757 8.9888502 10.6986474 10.7971389 10.5092744 11.2872694 5.7880879 8.1039922 11.6059598 9.1090139 NA 10.7490552 8.3133910 NA 2.6217589 9.0517484 11.1846927 9.8820189 9.1269481 15.1586542 10.2493400 9.8202867 8.7691793 2.2031385 15.1174638 9.4800253 12.4514484 11.0974380 10.5250535 9.4869854 8.8202868 10.7554070 -0.29260000 0.82490000 1.10560000 0.07196600 0.07196600 -0.26877000 0.02834100 -0.01896000 0.00000000 -0.66856000 3.65690000 0.07383300 -0.27523000 -0.27523000 0.08082500 3.65690000 -0.64678000 0.05565800 0.05565800 -0.66946000 0.05993700 -0.00761010 0.07110400 0.07110400 0.07110400 0.00069327 0.00069327 0.00069327 0.11638000 -0.29260000 -0.29260000 -0.25043000 0.07196600 -0.26877000 -0.26877000 0.02834100 0.02834100 -0.01896000 0.00000000 0.00000000 0.07056600 0.07599100 -0.66961000 -0.28453000 -0.28453000 -0.28453000 -0.28453000 -0.27523000 -0.27523000 0.08082500 -0.64678000 0.05565800 0.05565800 0.05565800 -0.62484000 0.05993700 0.01237600 0.06504800 0.07110400 0.07110400 -0.06397200 0.00069327 0.00069327 0.11638000 0.05679800 -0.69929000 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 -0.285 -0.285 -0.313 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 -0.285 -0.285 -0.313 8.8907926 12.8955230 4.8660920 9.8743716 2.8577223 11.6931406 -0.3817613 NA 8.4351464 7.2834986 NA 7.8176392 1.2031385 9.9133578 9.3298300 0.2031385 7.9713096 9.8110722 9.6018692 10.6818950 10.1286156 7.9378352 10.5767156 3.8276158 9.8166080 9.7161949 1.2031385 0.2031385 10.9869422 1.6181447 12.0530517 12.1232301 8.0190425 10.0465231 9.1775399 9.3081608 3.0776019 1.7881010 -0.3817613 5.2620197 8.6882839 9.8288343 9.7468017 3.5723561 6.8147901 6.4319438 10.2543343 5.8660895 9.6936420 NA 11.5877293 3.8276158 3.7880906 9.8532617 6.7900904 4.5488990 10.0954152 8.5084271 7.0734904 0.6181447 13.0395046 0.2031385 11.1212433 NA 7.4093256 5.9932033 8.3730504 8.9058752 14.1808823 4.7474465 8.2180759 12.5786174 9.9718611 11.1034891 13.2583514 12.5941004 8.6209778 11.2425015 13.2190050 10.3817903 9.8989337 8.9975414 -0.3817613 7.1918104 11.7691795 10.9746149 6.6068479 8.4589409 9.0349604 9.1368161 10.5704237 7.2834986 10.1239744 11.2057061 6.7161953 0.2031385 5.9400916 7.7020944 10.5332954 10.1932294 7.9127834 9.1229820 13.5345556 5.6293916 10.6628985 11.0399648 11.1512492 9.8116882 10.8385413 8.7717149 NA 9.1282545 7.3186025 6.2031248 11.0112852 7.7880879 10.4784740 10.4291362 6.9801064 12.6430428 10.6546800 9.6398370 13.3404902 10.4478857 9.0264927 2.0775848 TCGA-BH-A0BW 71 0 NA 355 breast stage i t1c n0 m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.942656e-06 4.509738e-07 13.3694981 1.3669236 6.8216745 10.6635227 NA 10.7662885 0.1445685 9.9816441 11.7552591 11.0799524 10.6121473 8.3717566 8.9721492 9.8848847 8.3956297 10.0787240 9.1696813 11.0705906 9.8444034 6.1445420 10.3809547 10.0383489 14.8767622 9.8015624 10.0423873 11.1287228 7.0474195 11.0624086 6.7244866 4.8449831 8.2857975 12.9222765 11.6472808 9.9072006 12.5901602 11.0531846 8.4468000 5.0190124 1.7294875 5.4050700 9.2548075 9.2976715 5.5253642 8.2721063 NA 10.9419331 9.8662107 6.5425723 8.9285986 10.4066366 6.9561845 8.6310417 0.8815080 15.9373510 13.6181706 1.5595897 8.3027308 NA 5.2738254 10.5574644 9.8593598 9.0014859 10.2151100 9.6667964 10.1199121 1.8815080 10.9879394 10.2151100 5.4543964 8.8507501 NA 5.7093265 14.1722174 8.0924612 11.1234905 12.4089844 11.5323796 1.3669236 NA 8.5439977 10.0801980 10.7760220 NA 2.0190258 7.0393600 9.9926431 9.0220815 6.0752802 7.7494035 5.6785199 10.1515690 11.8451260 2.4664705 12.8851658 4.5595775 7.0870565 10.3232067 12.9587237 13.0582415 7.7419739 11.2746833 10.4532600 10.3329286 11.6924003 6.1520353 7.0066627 11.8991510 7.9983710 -1.4402635 10.7934985 9.5623943 2.5595897 2.6478901 10.8336662 8.9204264 10.1562349 10.1580971 14.9403616 10.7577173 10.3845380 7.5595790 3.8815080 11.9301305 4.7494055 11.6500226 11.2896248 10.0614164 9.3186352 8.5253634 10.4013834 0.0176530 0.4938600 1.4214000 -0.5229900 0.0414610 0.4999100 -0.0194820 0.0880820 -0.5166300 -0.5330900 -0.5330900 1.0772000 0.4912600 -0.5400900 0.0092793 0.0092793 0.0092793 -0.2601300 0.1674200 -0.3211400 -0.5285100 -0.0241440 1.6396000 0.4837100 0.5327000 -0.5356300 0.4617400 -0.0284030 0.0094186 0.0176530 0.0176530 0.5046000 -0.5229900 0.0252190 -0.0410530 -0.5185800 -0.4822900 0.0880820 -0.5166300 -0.5451500 -0.5033100 -0.5253400 -0.5388800 -0.5292200 -1.0733000 -0.0019701 -0.0019701 -0.7898600 -0.5347200 0.0092793 0.0152770 -0.2601300 0.1674200 0.0825890 -0.3211400 -0.5285100 -0.5358300 0.4666900 -0.5555900 -0.0220880 -0.5272900 -0.5356300 -0.0165240 0.0044107 -0.0200310 0.1462900 0.000 -0.535 0.000 0.000 -0.122 0.139 -0.367 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 0.000 -0.535 0.000 0.000 -0.122 0.139 -0.367 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 8.3956297 12.8066167 2.8074992 10.0154202 4.0809475 10.7515638 3.0190080 5.6039734 8.3442142 7.3044134 NA 10.8024319 6.4604461 11.4919786 8.6811129 0.8815080 7.4391627 11.0312545 7.0514319 8.2548075 9.9560985 8.3194676 12.8772039 2.9519048 8.4019295 10.1199121 2.3669236 NA 10.4345607 6.0107910 11.3821501 12.6841853 9.2968265 10.2993598 12.1570499 8.6390639 7.5050231 4.4175623 0.1445685 2.9519048 7.0149065 9.1151272 7.4962171 2.6470381 10.8177095 4.8815080 9.4376302 6.6417281 10.2226926 6.4962179 10.8012646 4.1141671 4.2875018 9.4946558 5.2297379 7.1889359 10.2798235 9.5057546 8.1816313 0.1445685 12.1550699 2.0190258 11.7705550 NA 9.6765730 6.0752802 7.9105186 7.5595790 11.741995 8.392469 9.523198 12.590160 10.006663 11.153904 8.272106 10.181631 8.999410 11.126109 13.361086 9.063405 10.080198 7.930267 NA 8.037338 11.344623 11.044402 6.917131 8.756796 9.033285 9.662211 10.299457 7.956184 4.709324 9.801562 5.366934 7.881507 4.019008 10.543118 13.972811 11.573425 7.954042 8.938958 11.246080 7.673322 9.001486 10.016960 11.866922 11.496033 10.951897 9.917131 -1.440263 9.488793 8.276467 8.085100 9.022081 5.366934 10.810470 10.151569 8.434561 12.429748 10.374963 10.627014 14.222887 9.433023 9.855348 2.881508 TCGA-BH-A0BZ 59 0 NA 1492 breast stage iiia t3 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 96.50.0 7 3 2 3 1 4 2 2 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.827969e-06 1.24885e-06 11.7187548 4.8571500 4.8720998 11.2099300 -0.7278573 10.1379216 NA 9.5366311 11.6063220 7.6297406 9.3131631 6.7192711 8.7233995 10.2198253 6.8306090 9.1239375 9.5272170 10.5007066 7.3328842 4.6472282 10.1448633 10.2569629 13.5374006 10.8067345 8.3820192 10.6483138 8.2176321 9.6831697 -0.1428948 -0.1428948 9.1293920 11.0187027 12.6617909 7.9321840 12.7144840 12.7547443 9.3463300 4.3165802 0.8571848 6.7357131 8.2336379 8.9375245 7.6709324 12.3540047 2.4421208 10.6245078 12.6292593 2.8571450 9.9942232 10.6698631 5.5941156 7.4446157 0.5940708 14.9060704 10.7842622 1.5941185 8.9595641 -1.7278573 4.5941185 9.0119691 10.4607773 9.1239375 9.2183637 9.1011182 9.6932014 2.3596617 10.7645424 10.1597899 7.0730886 7.8813673 -0.7278573 8.2494686 15.0669977 8.3901303 10.8072207 10.7834469 8.5034096 2.0795317 5.9160442 7.4913569 8.4558237 10.2376120 -0.1428948 6.3111071 7.4244729 10.1536848 11.1303637 6.7720348 6.9691562 5.7479217 9.8453622 11.6612820 3.0795488 13.0830111 4.9015427 5.8190831 11.4898432 15.2362246 12.3036312 7.5413150 10.5988988 10.5462753 9.7656286 10.8463089 3.7640382 8.7967301 11.2645958 9.2672488 NA 10.4037239 9.2700736 -0.1428948 3.1862787 8.7346907 9.8969838 9.2820172 9.3891822 15.6549391 10.7622872 10.2526851 7.3409663 3.3596477 14.6665171 7.6053439 12.1822690 11.2916054 8.9160445 9.4238393 7.9196470 10.4321921 0.1610000 0.1610000 0.1610000 -0.1080200 -0.0649660 -0.0782430 0.0388020 0.1212300 -0.2718500 0.5067200 0.5067200 0.5067200 -0.1173000 -0.1173000 -0.0533410 -0.0533410 -0.0533410 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1496500 -0.2343200 0.2490300 0.2490300 -0.0974950 -0.0974950 -0.0974950 0.3856800 0.1610000 0.1610000 -0.0366130 -0.1080200 -0.0782430 -0.1708700 0.0388020 0.0388020 0.1212300 0.1212300 -0.2718500 0.2421800 0.1373200 0.5067200 -0.0063668 -0.0063668 -0.0063668 0.0777180 -0.1173000 -0.2758300 -0.0533410 -0.2439400 0.0055529 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1496500 -0.0989450 -0.2343200 0.2490300 -0.1511900 -0.0974950 -0.0974950 -0.3390900 0.1112500 -0.3020400 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 0.507 0.507 0.000 0.000 0.000 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 0.507 0.507 0.000 0.000 0.000 9.5742561 13.8068561 2.5201205 9.5236709 3.6645056 11.6604749 0.2721427 -0.7278573 8.7418303 7.8113471 -1.7278573 8.4532414 -0.1428948 11.1319173 9.3007852 2.4421208 7.9268243 8.9151426 9.1783275 11.8551536 9.7954661 7.0136554 11.0753105 2.3596617 7.0795435 9.6932014 2.1790651 -1.7278573 11.1172864 1.9726191 12.3790785 13.0724311 7.9967023 10.0883721 11.0795434 10.1586472 7.1880676 3.0795488 -0.7278573 6.4570640 8.5378035 10.2084582 10.1188541 2.4421208 8.9476428 7.1487054 9.6995013 6.3056113 10.3767872 -1.7278573 9.1775755 3.7957462 4.1050746 9.7122011 5.2874354 5.2945546 9.8524470 9.4767596 9.6025452 0.5940708 13.2565624 0.8571848 10.8067345 NA 7.0203811 5.2263852 7.9881507 8.1594092 13.886726 6.756004 7.696355 12.714484 9.490752 9.966982 12.354005 11.418439 9.362963 10.349338 13.109225 9.304923 8.455824 8.120811 3.481648 7.404046 12.655353 11.022477 3.944615 8.905184 9.046976 8.781964 10.510289 8.011969 8.835385 10.806734 7.520116 NA 5.908813 8.042439 11.127641 10.824137 8.195516 9.710461 9.162453 6.857151 9.123937 10.475231 10.718238 9.960876 11.095556 8.556434 1.857145 9.379569 7.033740 6.607579 11.130364 8.192541 11.003507 9.845362 7.768343 12.871927 10.642603 10.099928 12.082358 10.231104 9.780974 2.179065 TCGA-BH-A0C0 62 0 NA 1270 breast stage iia t1c n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white NA 61.60.0 7 3 4 5 1 4 2 3 1 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.585249e-06 2.224912e-07 11.4400581 4.3615789 6.8239238 10.8250147 NA 9.5597260 0.8697135 9.5018145 11.3299279 8.2598972 9.2970410 7.6111953 8.7645459 9.5535999 8.4108249 9.4050034 9.8962516 9.7937982 8.1780672 7.0791818 10.5004502 10.7308149 12.4041525 10.4300609 9.6321100 10.4054894 8.7751151 10.2663168 0.4547023 4.1176535 8.8470078 9.8527216 12.4719629 6.3373329 13.2869213 12.3664570 8.5117799 7.3932901 4.7277081 3.9571903 7.9411903 12.1616182 5.0396517 12.3588234 NA 10.6762776 13.5360630 6.7645452 9.5188315 10.9270429 6.7826169 5.4546892 -0.1302075 14.1448621 13.8681078 1.4547023 8.2555904 3.9141244 5.4844379 9.6445152 9.9438695 9.2084643 10.1763594 10.3957382 9.9498794 3.9571903 10.9317742 9.7803708 6.9571914 7.5421536 2.0396648 11.4410067 14.3535438 7.3786720 10.8340689 11.2983499 11.2946816 1.4547023 -1.1303654 7.6445154 9.4001344 9.6535448 NA 4.3291595 7.8865361 10.2828270 9.7152182 5.9886688 8.2051183 5.5135855 10.1551303 11.5629972 3.6770797 13.3818512 6.9886688 6.6510876 10.7807455 11.4698733 12.5920019 8.0396533 9.9195767 10.8669075 10.6058425 10.8788568 4.5421528 8.8282809 13.1525993 10.5350639 1.1916258 10.5310608 9.5198823 2.0396648 2.3291523 9.4990847 9.1504988 9.9378346 9.6794961 14.8148975 10.8322626 10.9283963 6.8004651 2.5701714 16.5116246 9.1574404 12.2558600 12.5118926 10.0991478 8.4917798 8.2641906 9.5106868 -0.1858400 -0.1858400 -0.2266200 0.2566200 0.6903600 0.2110000 -0.0099756 -0.2418000 0.0844650 -0.2595000 0.4154600 1.5640000 0.2076300 0.0080567 0.2538600 0.0423070 0.0423070 -0.2247800 -0.0965720 -0.4430700 0.0088920 0.4369900 -0.2334900 0.3214700 0.8268600 0.1691200 0.2322500 0.1983200 0.4762100 -0.2294500 -0.1858400 -0.0491110 -0.2274800 -0.4814400 -0.2577700 -0.2278500 -0.2780600 0.0288190 0.0844650 -0.2404700 0.0325630 0.0139350 -0.2595000 -0.0946210 -0.0946210 -0.0946210 0.4818200 0.0080567 0.0498240 -0.3079400 -0.2073400 -0.2247800 -0.2269900 -0.2229300 -0.2296500 0.0081959 -0.2024900 0.2502700 -0.2334900 -0.6064200 -0.2510400 0.3952900 -0.2509200 -0.2407000 0.0202030 0.0048579 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 0.000 0.000 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 0.000 0.000 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 9.7261536 11.9753092 7.3495086 9.0570801 5.8308891 9.9723599 4.1916574 0.4547023 8.5297237 5.8355123 NA 6.4342579 2.0396648 11.2875806 9.4926950 5.7400938 8.9195767 8.9127552 10.5381699 11.6279513 8.5255451 7.4281491 9.9277197 3.6468884 7.4584427 9.9498794 2.0396648 -1.1303654 11.8927893 2.1916574 12.4641693 12.1228369 6.8063666 10.4185500 9.6802997 9.2084643 3.1916574 3.5135792 -1.1303654 9.8976340 8.8398340 9.5959461 10.4410067 2.6770797 8.4388243 8.1271158 10.4438485 8.2812392 10.2865255 -1.1303654 10.8552142 4.4844411 3.1176618 9.6712748 6.5695427 7.5279398 9.1481776 9.9795587 8.8427080 6.0888963 13.2754014 1.4547023 10.3291597 NA 9.0308599 3.9990078 7.7766186 9.4631191 12.488680 6.029599 8.428149 13.286921 9.665768 10.540827 12.358823 12.231124 9.393290 10.135929 12.963228 11.198683 9.400134 8.467780 2.957190 8.178067 10.622945 11.485128 4.847010 8.755424 8.478907 6.264962 10.788714 8.329159 6.733914 10.430061 6.727709 1.191626 5.295991 7.919059 9.394270 11.419994 8.611195 8.189400 12.118397 8.978253 9.208464 10.730039 10.477983 10.147015 11.156286 8.571901 1.869714 9.134734 7.487857 8.627951 9.715218 4.677085 11.338352 10.155130 7.588192 13.378946 10.237689 10.617921 12.680099 11.834971 10.061404 3.393293 TCGA-BH-A0C1 61 0 NA 1339 breast stage iiia t3 n2a m0 7-8-2014 female 2007 NA NA infiltrating lobular carcinoma yes 8 white not hispanic or latino 93.56.0 6 3 3 NA 3 2 1 2 3 3 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.946798e-07 10.74505586 6.43279576 7.25112258 11.00785928 0.39933518 10.63658339 -0.60055544 10.39514058 11.89022429 8.03055072 9.53764513 8.38663724 9.17662870 9.61793666 7.43554692 9.37019829 9.99928622 10.29191626 7.07885317 2.85879663 8.81933353 9.95587944 9.17251252 11.69241390 9.36732017 10.62518335 6.22592270 10.75279048 -1.60077421 0.72132891 8.56050518 12.39531718 11.64863504 6.82563809 12.89628960 13.95587948 8.40780225 6.16755864 3.64730300 5.98433642 8.15259008 9.04232778 7.79383607 13.37879861 1.39938987 11.05981505 13.58335766 5.79169167 8.77693106 11.26065425 6.89921914 4.35357031 -0.60055544 13.96880393 8.92391514 2.56929665 8.95875047 -1.60077421 4.23226166 10.26781023 11.12367408 9.46882318 11.86110866 10.53860499 10.09764398 2.20673698 12.08072164 10.72439772 5.55924400 7.88721330 -0.60055544 11.06537547 15.03357471 8.57383726 11.21235290 11.02736323 8.96922908 2.48684306 3.56929665 10.04907868 8.95492126 11.60516668 NA 5.57928275 7.20027285 9.69743607 11.14294562 4.96922879 6.07885317 4.33011376 10.75555025 12.10230362 2.92293994 13.78236888 3.89122474 7.34188793 13.18242280 13.57990423 12.91538118 7.85264436 10.66615999 11.24152734 10.78629209 11.02371194 5.08587500 8.73699546 11.56616419 11.82524494 0.98433414 10.05803124 9.25034153 0.72132891 3.13000830 9.58672553 11.14882387 10.47652295 9.09460161 14.73210933 9.50724441 9.88117286 7.88721330 -0.01566586 15.70271717 10.60913136 13.01827506 12.96078072 10.85238679 9.39160363 9.03055045 11.23441917 0.615710 1.519600 1.505300 -0.150290 -0.150290 -0.155030 0.181720 0.200600 0.175610 0.186920 0.186920 0.186920 -0.130110 -0.130110 -0.135740 -0.135740 -0.135740 0.204420 0.851060 -0.156940 -0.125640 -0.484000 -0.445020 -0.089302 -0.450400 0.278840 0.278840 0.278840 0.252030 -0.436900 -0.491200 0.132140 -0.150290 -0.155030 -0.167770 0.181720 0.181720 0.200600 0.175610 0.175610 0.192230 0.193900 0.186920 -0.075345 -0.075345 -0.075345 -0.075345 -0.130110 -0.112730 -0.135740 -0.135740 0.204420 -0.484600 -0.484600 -0.156940 -0.125640 -0.462910 -0.464930 -0.456110 -0.450400 0.208240 0.278840 0.278840 0.257460 0.221450 -0.057789 -0.130 -0.130 -0.136 -0.136 0.139 0.139 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.437 1.003 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 -0.130 -0.130 -0.136 -0.136 0.139 0.139 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.437 1.003 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 9.1050057 13.7760754 9.2393644 10.0858739 2.9153870 11.8005196 0.3993352 -1.6007742 8.4600692 8.6720031 -0.6005554 8.8915671 3.3993762 10.3513866 9.3241859 1.2067057 9.1634157 10.0709145 11.8692696 8.8055785 9.3414481 7.6520390 10.4661353 2.4868431 10.2223425 10.0976440 3.2573577 -1.6007742 9.9214644 1.9843341 12.4431697 11.8961024 8.8982226 10.1909433 8.1015461 9.4458155 7.3908955 1.2067057 1.2067057 0.3993352 8.8087644 8.3477405 9.9356206 4.1272949 9.0529440 5.7656965 9.6021094 6.1807327 8.9635230 NA 11.5443502 3.6473030 5.0140830 10.3485910 5.7167852 3.8912247 9.7959783 7.3330641 6.2067292 0.7213289 14.0248540 1.9843341 9.9041923 -1.6007742 8.1889073 5.4437691 8.3564753 7.9443378 13.252488 5.907167 8.209945 12.896290 9.983866 11.576326 13.378799 11.641357 8.744779 11.089371 13.955311 11.665867 8.954921 9.316746 NA 6.167559 11.926606 11.518477 7.257355 8.881173 8.804515 8.244863 10.855158 7.321215 5.432796 11.692414 5.783077 3.684774 9.407102 7.362645 11.043004 10.117050 7.965428 7.356476 12.770401 5.244864 9.468823 10.342254 11.486836 9.768425 10.774684 9.275890 1.721285 9.609625 9.472122 5.421742 11.142946 7.759123 10.394466 10.755550 7.046832 13.591088 9.436234 10.288497 12.712185 11.569924 9.258132 1.399390 TCGA-BH-A0C3 47 0 NA 1464 breast stage i t1c n0 m0 2-10-2014 female 2006 NA NA mixed histology (please specify) yes 0 white NA 96.50.0 8 2 2 5 1 4 3 3 3 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.224912e-07 1.112456e-07 10.9186413 10.4687154 6.2823323 11.6662240 2.4592218 10.9803571 0.7587296 10.2207609 11.8184524 7.7446119 9.6042600 7.6198568 9.0908066 9.4592097 7.0625503 9.0055106 9.3008346 9.7339013 8.4883909 5.6167517 10.4871157 9.6337512 12.9532960 11.8017973 9.2486178 10.3586828 6.9286948 10.8561437 1.0807259 0.7587296 10.2011952 12.6300014 12.1510874 8.5069629 12.6133462 12.0283350 9.5781508 6.5916600 3.7587722 7.3437320 8.5483037 9.7573603 8.0851994 11.9458127 1.7587722 10.7169601 11.2256112 5.4311950 9.5034777 10.3757782 11.7351551 7.7012843 0.3436921 13.8216846 9.4320790 3.7129699 8.2764394 -0.2412704 5.1510876 9.8574601 10.6167510 9.5677340 10.2440962 9.6291347 9.6383532 2.4592218 11.6690379 10.1376066 5.2017123 8.3075920 -1.2412704 9.7664981 14.5893099 8.4283108 11.1944402 11.4028515 8.3661001 1.7587722 6.5531854 8.2842906 9.7467446 11.3730197 -1.2412704 4.5136550 7.2940454 9.8282198 12.1749077 5.1681606 6.8828912 5.3881275 10.4513855 11.4672073 2.9286925 13.9135485 5.9779393 7.1850350 12.3119192 11.1676304 12.7724416 8.4592099 10.1692213 10.9473588 10.6219767 11.6017095 4.8880516 8.6120797 12.1226310 8.9021532 3.2182077 10.6062188 8.9374347 1.9286925 3.5666447 9.7811377 9.5119866 10.2481163 8.9959799 14.8032281 10.4751608 10.2536256 7.1723975 3.2182077 14.5187881 7.8382547 12.8122717 12.3103581 9.3716384 9.1229046 8.1250921 11.8688209 0.0047190 1.9804000 0.3516900 0.0000000 0.0000000 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.0045695 -0.0045695 -0.0045695 0.0031910 0.0031910 -0.2887800 3.6569000 -0.2876200 -0.0107840 -0.0061964 0.0083351 0.0066653 -0.0034627 -0.0776620 -0.0776620 0.4737500 -0.0457290 -0.0457290 -0.0501000 0.0997300 0.0047190 0.0147810 0.0087528 0.0000000 0.0027745 0.0110480 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.2098300 -0.0048461 -0.0048461 -0.0045695 -0.2921500 -0.2921500 -0.2921500 -0.2959100 0.0031910 0.0031910 -0.3320200 -0.2771500 -0.0107840 -0.0061964 -0.0162920 0.0083351 0.0066653 -0.0034627 -0.3015700 -0.0776620 -0.0776620 0.0105640 -0.0457290 -0.0501000 0.0997300 0.0095883 -0.3250700 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 9.7942565 13.1275492 6.9336954 10.4743030 4.8242129 10.0756171 3.2182077 1.9286925 8.4400083 9.5916600 -0.2412704 9.9302783 6.0625513 10.4378101 9.2695342 4.3133620 10.7661477 9.7005512 7.2345032 11.3328904 10.2389542 7.6444663 12.2074025 3.3437347 8.5434046 9.6383532 5.5269546 NA 11.3321805 2.6656656 12.3818512 12.4338449 9.1457103 9.7983744 9.5186581 9.2882005 4.9875892 1.0807259 0.7587296 7.4557374 9.1327226 8.6656607 9.2415778 8.2161507 7.0075992 5.8672936 9.5916600 6.6352872 10.1960018 NA 11.5513569 3.5661210 4.9485962 9.4573618 6.5205213 4.9875892 9.5294339 9.4426419 6.1424747 NA 13.2961704 2.2181922 10.5044443 NA 8.6322140 6.3286265 7.4968626 9.1871301 15.167151 6.867295 8.638353 12.613346 10.552190 10.856473 11.945813 12.524367 12.153768 10.990891 13.769298 10.677261 9.746745 8.714420 1.343749 7.727437 10.767549 11.210496 5.591661 8.863369 8.723111 9.052242 9.758375 7.715872 8.701285 11.801797 5.846233 3.513655 4.803165 7.416589 11.971266 10.365638 8.914853 8.212041 12.733812 7.613638 9.567734 10.392673 10.509477 10.685066 10.265078 9.014979 NA 9.413656 7.913208 6.336199 12.174908 7.588493 10.306147 10.451385 7.989991 13.681260 10.395848 10.303734 12.565622 10.122905 9.612079 4.313362 TCGA-BH-A0C7 48 0 NA 1305 breast stage iib t2 n1mi m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 85.58.0 3 1 1 NA 2 4 1 1 3 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.952849e-07 1.668684e-07 11.65485398 6.97524268 7.75110683 10.81132580 1.22928028 10.55296875 0.64431778 10.33606945 11.71958219 8.51777016 9.88471971 7.05371632 9.32556428 9.14350745 5.94810554 8.89462438 9.95342327 10.75285035 7.81090769 3.01355159 10.00736554 9.39698531 14.36428506 11.63395693 10.16297899 10.93932944 5.43440138 10.56740569 -1.94064472 1.75979500 8.18735752 11.62279801 13.03847593 5.93587929 13.39851748 12.93463278 8.96023020 5.55121760 3.73179148 5.99600226 8.80923275 12.08493555 7.85377925 12.89802567 3.99010169 10.19314782 14.19388998 2.91733627 9.08009347 10.36514014 7.95418119 3.34477170 0.38128337 13.40348624 9.23428910 3.30729737 7.24671590 1.05935528 3.81425304 10.11396767 9.48142812 9.00991929 10.85743009 10.32790536 9.49815531 5.42568420 11.45154665 9.88908608 5.80083003 8.21164839 2.22928028 12.07582350 14.22909270 10.34747388 11.19939427 12.05786568 9.06779196 1.75979500 5.87314385 8.32965868 9.22049538 11.01646547 NA 5.14682626 6.98714120 10.83353276 10.98769668 11.03503226 5.51057588 5.86671762 8.91033152 12.07930154 6.30729008 12.99167043 5.84726535 7.35398396 12.07059065 11.97215919 12.40981920 7.88908592 11.03646439 10.30194208 10.20348627 11.22301304 4.26881613 8.21797320 11.65834637 11.71288028 0.05935528 10.00919011 9.38016384 -0.35568222 3.82384105 9.11057231 10.96493840 11.69723353 9.31143749 14.91381788 10.34216225 9.95872032 8.73972290 1.51878690 15.15782733 5.73884348 12.19274645 11.08207797 9.60432787 8.99526516 8.30610408 10.24696904 -0.25709000 0.55504000 0.45041000 0.03045100 0.03143600 -0.57585000 0.32339000 0.03298600 0.01944600 0.01628600 0.01628600 0.01628600 -0.26360000 0.00346870 0.07412100 0.07412100 0.07412100 -0.26985000 -0.26985000 1.36830000 -0.00304750 -0.25387000 -0.56425000 0.56970000 0.56970000 0.24031000 -0.25334000 -0.28025000 -0.07294200 -0.25709000 -0.25709000 -0.25914000 -0.55737000 -0.57585000 0.01754400 0.02609200 0.02067900 0.03298600 0.01944600 0.01944600 -0.27845000 0.02468900 -0.57697000 -0.57299000 -0.57299000 0.02609500 0.01502800 0.00346870 0.00346870 0.07412100 -0.56465000 -0.26985000 -0.26985000 -0.26985000 -0.57467000 -0.56117000 -0.24837000 -0.24326000 -0.56640000 0.56970000 -0.55767000 0.22823000 -0.28025000 -0.57832000 -0.00027724 -0.56793000 -0.264 0.000 -0.569 -0.569 -0.270 -0.270 -0.573 -0.561 -0.248 0.087 -0.243 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 -0.552 0.000 0.000 -0.264 0.000 -0.569 -0.569 -0.270 -0.270 -0.573 -0.561 -0.248 0.087 -0.243 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 -0.552 0.000 0.000 8.46981477 13.49232932 6.56715753 9.85783516 4.54913314 10.81174403 2.22928028 -0.94064472 8.72292158 8.12679790 NA 8.42349792 5.22928797 11.16265120 9.55771393 6.39921383 8.79576532 9.34822954 8.15739545 10.17049908 9.40905377 7.88273046 10.29657338 1.38128337 8.55221797 9.49815531 2.75979500 4.38129030 10.65298798 2.75979500 12.16821451 11.62410834 8.19250538 10.36371470 10.62874435 8.95114714 5.25903516 1.64431778 0.86671020 4.10375779 8.91578887 9.12073450 10.81048897 4.87954404 8.13397342 6.75633081 10.81216214 5.42568420 10.61083135 NA 10.92296892 2.75979500 4.01356052 9.41491816 6.39640613 3.30729737 9.63820782 7.92354974 5.58292626 -0.94064472 13.23549758 0.05935528 10.56691027 NA 7.77360871 4.86672009 8.10375726 8.62446540 11.985658 8.399213 7.744112 13.398517 11.596072 11.296424 12.898026 13.441210 9.667156 10.896794 12.773341 11.761753 9.220495 8.686897 1.966246 8.561200 12.384880 11.1192148 6.9111127 8.4866762 8.9587203 10.7218093 10.6616262 6.4687544 8.8537793 11.6339569 6.8209142 2.3812834 4.8407251 9.4336585 10.7860073 10.3164566 7.9989424 9.1037575 11.7901519 5.6592767 9.0099193 9.6315900 11.7645638 10.0370011 11.1722915 9.2342891 0.8667102 8.9012736 6.8209142 5.6367928 10.9876967 7.6850725 10.9015173 8.9103315 7.9358805 12.9778540 10.1321659 10.5036019 12.7847297 10.6002179 9.7813169 0.8667102 TCGA-BH-A0DD 58 0 NA 1394 breast stage iib t2 n1a m0 2-10-2014 male 2006 NA NA infiltrating ductal carcinoma yes 0 white NA 96.50.0 3 1 1 3 2 4 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 1.946798e-07 11.86131500 6.74809890 7.84575348 11.39007408 NA 11.04776930 NA 10.22831342 12.03999324 8.73274473 10.26859276 7.89327180 9.49723132 9.08963029 7.81915914 9.45178828 9.33462704 10.29537027 6.63575149 2.18643717 10.22240599 9.08498692 14.29111809 11.31869628 9.72739143 11.13570929 5.22747155 10.23795383 -0.51395501 1.94542043 7.21051745 10.54703766 12.42291796 8.19853099 15.15513822 13.16229170 8.76909234 6.61012569 2.07097316 4.63574859 8.72082156 9.22831342 9.44672995 12.85621463 NA 9.15842943 13.65365737 1.80793188 8.49583265 11.48494697 6.56815374 3.39289439 0.07093882 13.77434672 8.63828892 3.69545938 7.48318375 1.80793188 3.34399047 9.65028241 10.49723132 9.15045128 11.34922239 10.09979344 9.81523982 -1.51416103 12.21488112 10.98360638 5.44020143 6.95360981 -1.51416103 11.51304605 14.21232863 9.24899229 10.98485320 13.38304586 9.48459454 3.29335577 2.80793188 9.19077237 9.33775301 11.54484135 -1.51416103 4.67582722 7.18297132 11.06696914 11.56215154 6.28690332 4.97785689 4.15842590 9.62043026 12.50628953 4.12985998 13.34169984 5.86104223 7.60753746 12.11399380 12.33237589 12.73059084 8.01152471 10.60137283 11.53670298 11.06501350 11.33638622 5.84355680 8.16548389 11.98597443 11.85995666 -1.51416103 10.16240190 9.24256035 2.07097316 3.62104378 9.75746702 9.70335597 9.16899872 9.73511748 14.88304353 10.12805569 10.68782163 8.55612512 5.81691964 14.97804495 9.24422729 12.50115769 11.31016724 10.62715319 9.18904248 9.30058639 10.37736249 -0.49965000 0.48051000 1.41530000 -0.00470790 0.01251600 0.01922300 -0.00455900 -0.00496850 0.02108100 -0.01257600 -0.01257600 1.46530000 -0.01972600 0.00000000 0.42839000 3.65690000 0.96843000 -0.03059200 0.51263000 -1.24510000 0.02174400 -0.01216200 3.65690000 3.65690000 1.52420000 0.34909000 0.37479000 0.37479000 0.48027000 -0.61278000 -0.49965000 0.00305220 0.00805670 -0.01230000 0.03383100 0.02104300 0.02104300 -0.03523100 0.02279600 -0.03265300 0.49441000 0.44763000 -0.02197200 -0.01656700 -0.01656700 -0.01656700 -0.01656700 -0.00596240 -0.00596240 -0.06424000 -0.53551000 -0.00069303 0.51943000 0.47392000 -0.85623000 -0.02374400 -0.01174900 -0.03817000 -1.15450000 -0.08213700 0.52958000 0.37792000 0.37479000 0.47129000 0.04216600 -0.05805800 0.000 0.000 0.000 -0.536 0.460 0.460 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.999 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.460 0.460 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.999 0.000 0.000 0.000 7.88901594 12.29938439 8.73866956 9.16899872 4.39289439 10.62139266 0.07093882 NA 9.12805569 7.41969478 NA 6.94850624 1.65594710 9.99280751 9.43144788 5.02516171 7.50837160 9.78119904 8.41526262 9.88421326 9.39827212 8.23083801 9.19077237 1.57177388 9.88100258 9.81523982 1.07093882 -1.51416103 11.55175670 3.39289439 12.00809508 11.38233643 7.30937085 9.85560139 10.53992988 9.29978521 5.80793188 3.73392913 0.80793188 2.18643717 8.49862865 8.11171263 10.04203100 2.48599349 7.31086722 5.70517342 9.77775027 7.02127983 8.75161904 -1.51416103 11.42595049 2.29337048 3.77141023 9.91591806 6.20505033 3.39289439 8.65592886 7.29978498 4.48600637 -1.51416103 13.26987192 -0.51395501 10.91932861 NA 7.41378192 3.77141023 8.75746702 7.20368080 16.020608 6.122629 8.440200 15.155138 8.356800 10.839978 12.856215 12.806029 9.767279 11.056571 12.805535 11.005395 9.337753 9.762128 2.070973 8.512528 11.937859 11.132113 8.741032 8.342429 9.464714 10.352124 10.898532 6.193364 5.886884 11.318696 5.440201 1.070939 8.615287 9.646890 11.233568 9.474689 8.030968 8.109885 13.194926 4.695459 9.150451 10.245892 11.754400 9.624916 10.634798 9.025163 4.213923 8.353870 9.494762 4.675827 11.562152 7.533128 10.357524 9.620430 7.850139 13.139689 9.553438 9.508372 12.546024 11.333844 9.942358 1.945420 TCGA-BH-A0DE 62 0 NA 948 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 8 2 2 NA NA NA 3 1 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.39057e-07 10.7796045 7.5610297 6.8552423 11.6269824 0.6753643 10.6291661 0.2602666 9.8743922 11.1039553 10.5456981 9.9077543 7.0416559 9.1741827 9.7400762 6.1099623 8.3388915 9.2347104 9.9403623 7.9397761 4.3477578 9.9532019 11.0397417 13.2464342 9.4293858 9.1988953 10.4028284 5.9041517 10.0212930 0.9972563 1.2602666 9.0317853 12.1117847 12.8344163 7.5912126 13.5374380 13.4147448 10.5086188 5.5701502 NA 7.0151831 8.7929764 9.3128639 8.1162025 12.7393182 NA 10.4214278 13.1956451 3.5333142 9.3359711 10.2654526 10.0708675 8.9017454 -1.3248164 13.9927252 12.1302752 2.8452492 7.9374280 -1.3248164 5.7087556 9.4883130 10.6876087 9.2649846 10.3173850 9.4599682 10.2447143 3.4826934 11.1586453 10.2091498 5.5333142 7.6949241 -0.3246357 10.3468745 14.8078130 7.7387557 10.9639111 11.4256216 8.1611626 1.8452692 4.7627953 7.1831282 9.0218472 11.8396118 0.9972563 5.1988948 7.0284807 10.5629348 11.1023843 6.2451895 6.6583272 5.0151853 10.7471309 11.4937158 4.9607341 13.6237462 6.5941962 7.8577279 11.8287271 12.4204825 12.6209601 8.5867253 9.5371957 11.0348085 10.8584384 10.7867951 4.3757762 8.2715233 11.6338861 9.2028105 -1.3248164 10.5960584 9.1439574 0.2602666 3.7632203 9.6053315 10.0724732 10.0190743 9.0525439 15.1916182 10.3870004 10.3688204 8.5807202 3.8046215 15.2735749 8.3565717 12.7264573 12.1760508 9.6816594 9.2546493 8.0762127 9.8726115 0.0240310 0.0240310 0.0370760 0.0140510 0.0140510 -0.0098185 0.0160060 0.0175440 -0.5366200 0.0157270 0.0157270 0.0168450 0.0000000 0.0000000 0.0214750 -0.5170200 -0.5170200 0.0148880 0.0148880 -0.0095426 0.0102850 0.0016642 -0.5199300 0.4481600 0.4481600 0.0065262 0.0065262 0.0065262 0.0293250 -0.5130000 0.0240310 -0.0124380 0.0140510 -0.0060904 -0.0098185 0.0160060 0.0160060 0.0175440 -0.5366200 -0.5366200 0.0129340 0.0129340 0.0157270 -0.0122960 -0.0019399 -0.0019399 -0.0019399 0.0000000 0.0000000 -0.5148600 -0.5228700 0.0148880 0.0148880 0.0148880 -0.0095426 -0.5301500 0.0016642 -0.5355100 -0.5199300 0.4481600 -0.0055375 0.0065262 0.0065262 0.0293250 -0.5266500 0.0158660 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7534842 12.4275049 7.6977009 10.4302209 2.9972563 10.3087828 1.8452692 0.6753643 8.4285503 8.6193132 -1.3248164 8.4303045 5.1182767 10.2125518 9.4041042 -0.3246357 8.7994545 9.7568168 9.9244469 9.7674299 9.6670466 7.6949241 12.3111648 3.9607341 7.1429392 10.2447143 5.2752455 NA 11.2930304 3.0676559 12.4699523 11.5424190 8.9268157 10.3397806 9.0547118 9.0857847 4.8046164 3.1989027 1.2602666 4.9421203 8.1949696 9.2743164 9.7400762 6.7786212 6.5749325 6.9791142 10.0427482 6.3406691 10.0000765 0.6753643 10.6001459 2.9972563 7.7707306 9.7715017 6.0740772 2.1347795 9.7733654 9.3723009 5.0847234 -0.3246357 13.6033890 0.2602666 10.3578891 NA 8.1791592 5.6640191 7.8552423 8.5518505 12.542563 3.960734 8.873778 13.537438 10.631710 10.133740 12.739318 12.368494 8.627346 10.446410 13.076346 11.250400 9.021847 7.932721 1.260267 7.683762 10.489515 11.0279286 7.2375761 9.1949696 8.9065545 8.5971743 10.3084286 6.8552423 5.8250809 9.4293858 8.0655023 2.6753417 7.5208237 6.1638167 11.2715231 10.2120662 8.4583316 8.4875109 11.3462109 5.0328855 9.2649846 11.0129553 11.1981601 10.2992149 10.3605202 8.5792152 0.9972563 8.8678112 7.9186265 4.4566945 11.1023843 7.0762127 11.2473230 10.7471309 7.3335445 13.3714859 9.8805156 10.1322011 13.0030965 9.9338994 9.8282520 0.6753643 TCGA-BH-A0DG 30 0 NA 713 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 96.50.0 2 2 2 4 3 2 3 3 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.781139e-08 11.7910365 8.3852477 7.0909360 11.4682595 1.0597014 9.6158404 NA 10.1149999 11.4845136 10.8715738 10.0057465 8.0324100 9.4951793 10.2584081 6.6143064 9.1225731 10.5121647 9.8245890 7.5483611 3.7821884 12.0921765 10.4872398 14.5863634 10.0381419 8.8773406 10.7618902 7.3227520 9.9539290 1.5451282 1.0597014 9.2942954 12.4895426 12.5347415 8.8515317 12.1769709 13.2034195 9.2226124 5.9077151 1.9076983 6.8038780 8.4910061 8.9176985 8.2846839 12.6452434 0.3227358 10.5973242 13.4118713 5.0597187 10.1512481 10.4817822 10.5001715 8.2155476 1.9076983 13.8019764 8.9892719 4.5957722 7.5451444 NA 5.4520353 9.6640853 10.3906344 9.9214247 10.2923782 10.1895156 10.4360600 2.7377949 11.2974055 10.3680564 6.1890002 8.2593897 5.0597187 10.8338456 14.9959137 8.1757701 11.5799432 10.5583672 8.6729546 1.5451282 5.8875375 8.9726068 9.3879436 11.0324101 0.7377733 7.7656952 7.5611566 9.2875741 11.2000360 7.1041112 6.6977919 5.4520353 9.8508804 11.7519842 4.6685276 13.3852478 5.5957692 6.5832799 11.9642016 13.4813090 12.5557723 7.6506784 10.7168573 10.8446794 10.5544170 11.0801418 4.6685276 8.8292248 11.5619526 10.6081541 1.5451282 10.4141872 8.8252523 0.3227358 3.7095664 9.8919746 11.6538554 10.2485536 8.8580273 14.8956100 10.4498864 9.5555725 7.9325461 3.9472453 15.4758024 9.9114664 12.6154569 11.9172320 9.8644938 9.5635431 8.1535313 10.6398705 0.00107960 0.67326000 0.59314000 0.00624810 0.00138680 0.00792280 0.00013863 -0.00336740 -0.00336740 -0.37110000 -0.00186160 0.01866300 -0.00716710 -0.00716710 -0.00166290 0.35920000 2.93350000 -0.39730000 0.01318700 -0.00346270 0.35920000 -0.00567570 -0.01972600 -0.40141000 3.65690000 -0.03408600 -0.03408600 -0.03408600 0.33993000 -0.41091000 0.00107960 0.00000000 -0.37932000 0.00752710 0.00944910 0.00013863 0.00013863 0.00182710 -0.00336740 -0.00336740 -0.00727060 0.00610900 0.94895000 -0.02414900 -0.01225300 -0.01225300 -0.01225300 -0.00716710 0.00166420 -0.00011024 -0.38448000 -0.39196000 0.01474900 0.01474900 -0.00346270 0.10293000 -0.01356900 0.00497680 -0.01972600 -0.40506000 -0.00512270 -0.03408600 -0.03408600 0.52083000 -0.00373950 0.02188400 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.148 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.148 9.7455175 13.6458066 5.7264743 10.1306434 4.3149140 11.6471200 3.9857190 1.5451282 8.6566526 9.1418665 NA 9.0490949 3.8670761 10.1122855 8.8567305 1.3227358 9.5459491 9.7236313 9.0010585 10.6093096 9.8788810 7.9325461 11.3766778 2.9077175 9.1545870 10.4360600 4.8252514 NA 11.7227418 3.1301072 12.2957317 11.8219334 8.3888409 9.9773878 9.6288135 9.8926075 7.0820852 2.5451529 -0.2622267 5.8146043 8.4657096 8.3114364 9.9732053 5.4382296 6.8794362 6.0776404 10.3288441 6.9714090 10.7971338 NA 11.0455594 3.7377841 5.2613503 9.4927353 5.4412776 5.6326085 10.0415702 9.1084769 8.4640074 0.7377733 13.4120920 1.9076983 11.0124587 NA 7.9251414 6.5515698 7.8747804 8.7321427 12.722614 5.668528 8.453751 12.176971 10.469533 10.755642 12.645243 12.041142 10.813603 10.293337 13.077570 10.262821 9.387944 9.868360 -1.262227 10.385248 11.519354 11.660188 6.431277 8.592658 9.178659 7.396001 10.741370 7.462303 9.698515 10.038142 5.825251 4.668528 6.861911 8.361707 12.745868 10.525692 7.879896 8.635635 11.209465 7.326504 9.921425 10.947852 11.095341 10.391978 10.977686 8.807910 -1.262227 9.465387 7.629573 7.538689 11.200036 8.760157 11.051846 9.850880 7.213523 13.482781 9.618138 9.907714 12.260861 10.792394 9.670742 2.825256 TCGA-BH-A0DH 63 0 NA 1156 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 3 white NA 72.63.0 3 1 2 3 2 1 1 3 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.39057e-07 11.3390236 5.8381299 6.1975312 12.5145504 0.1751733 9.1438311 NA 9.5030911 11.2777961 9.0112147 8.9995928 7.3044472 9.0870554 10.0775394 6.3450894 9.4910686 9.1409486 8.7424866 6.0578077 0.1751733 9.6187986 9.3600396 13.4721760 9.5030911 9.3592130 10.5902018 5.6776633 10.0294820 NA NA 8.1826590 12.5108338 12.2752790 6.0659341 13.2564258 13.8709001 8.5105545 6.3517538 4.1137672 8.2012266 8.0331454 9.6630042 6.7898740 12.9115662 1.5901948 10.6191438 13.7281935 6.0820553 10.1896451 10.8030021 8.6056169 8.1428708 1.1751733 14.2681870 8.6803142 1.5901948 8.3813647 -0.4098531 5.7500732 9.8534710 10.1152332 11.1891847 11.4099817 9.3282941 9.3095905 6.6345962 10.8939825 9.6993795 7.2159106 8.5135294 12.2427107 9.9565240 14.0547475 6.2539023 11.1600574 10.7227015 8.1467077 1.1751733 4.4970950 7.6345962 8.4103805 11.5312494 NA 5.1751653 7.6535968 9.8517091 11.4309797 3.9121325 5.7701102 3.8381248 9.8045209 11.3590064 4.0820553 12.7181155 7.2519794 6.7143225 12.8136756 13.1585142 12.5995930 8.8779141 11.4077850 10.1863915 9.9835922 10.1868574 3.7996572 8.8008731 11.9329709 10.5613860 NA 10.0372850 8.8178177 -1.4096615 2.6776661 8.8709725 10.5238924 9.1685743 8.7984362 15.3920364 9.5845552 10.0398663 7.3113006 2.6776661 15.0292697 9.4023790 12.2023792 11.1706959 9.5392990 9.8876913 8.1619542 10.0608657 0.00000000 0.00000000 0.00000000 0.00416320 -0.00498440 -0.00089716 0.00069327 0.68589000 -0.78555000 0.00235810 0.00235810 0.73891000 0.01098200 0.01098200 0.00563140 0.00638710 0.00638710 -0.77634000 -0.00360110 -0.77546000 0.00402430 0.02036900 0.01181800 0.01181800 0.01181800 0.00221930 0.00221930 0.00360760 0.03608800 -0.78732000 0.00000000 -0.79620000 -0.78479000 -0.00089716 0.00249690 0.00069327 0.00069327 0.68589000 -0.78555000 -0.78555000 -0.00124730 -0.00124730 0.02426800 0.01377200 0.01377200 0.00264790 0.02496900 0.01098200 0.01098200 0.00563140 -0.78488000 -0.77634000 -0.00360110 -0.00360110 -0.77346000 -0.00303790 0.01433000 -0.77634000 0.01181800 0.01181800 -0.77073000 -0.00526100 0.00360760 -0.78007000 0.01810300 -0.78766000 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 0.713 -0.063 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 0.713 -0.063 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 8.2714402 12.0770368 5.1293613 8.7626292 -4.7331235 10.4989696 2.0496308 -1.4096615 8.9597991 6.6508981 NA 6.8238220 2.5901948 10.3939292 8.9846645 -0.4098531 6.6454841 8.0618772 12.0363805 10.1167010 9.3819508 7.5646167 10.6713523 3.3975566 8.5703415 9.3095905 4.6776661 NA 10.3898881 2.3975566 12.0556406 11.6424301 7.2484134 9.6153413 7.8238213 9.6454843 1.7601358 0.1751733 -1.4096615 4.7399507 9.5142720 10.4254627 11.1404676 5.3450876 6.2780331 7.8709725 10.4978436 4.0164696 9.8333757 -0.4098531 10.5649748 4.2626286 4.1751653 9.8754941 6.2663705 7.2555376 10.8680703 7.7525934 12.6969283 NA 13.5350511 -1.4096615 10.2902079 NA 6.1751633 4.4230941 8.2430468 7.1486220 13.3504773 4.5902008 8.8129968 13.2564258 9.5516516 10.6703531 12.9115662 12.9561824 9.5452703 9.8202222 12.6935715 7.8262161 8.4103805 8.2067507 -0.4098531 7.6291205 10.4376507 10.606314 5.358386 8.990014 9.485020 8.554543 9.814101 6.544399 6.856988 9.503091 7.690864 1.912113 5.276701 6.569541 9.587381 10.282381 6.739949 9.049633 13.691726 7.125478 11.189185 10.720129 9.282817 9.273196 10.625688 8.631861 -1.409661 8.244802 5.550550 8.351753 11.430980 4.965239 9.794773 9.804521 7.642770 13.570207 10.121583 9.887691 12.447308 10.142871 9.598630 2.497101 TCGA-BH-A0DI 63 0 NA 673 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 96.50.0 2 2 1 4 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.396621e-07 1.668684e-07 11.7771455 8.7083245 7.2228982 11.1193311 2.9789644 9.9966598 1.0529723 10.5909677 11.6881467 7.1698368 9.7211486 8.0094939 9.5222076 10.2148604 5.6258637 9.0268136 9.8045168 9.8204952 7.9331684 4.7971323 10.1525836 11.1737290 14.3025011 10.5339649 8.9610650 10.8906007 6.0164473 9.7897130 NA -0.2689906 9.3309574 12.7890364 13.4960717 8.6152151 13.1933552 12.5950373 10.6899598 5.8499868 3.0529723 7.9598634 8.5222076 7.9574567 9.5416163 11.9947540 0.7310094 11.2034817 12.8579911 5.4452897 9.5367886 10.1996687 7.9034722 8.3402235 -1.2688168 14.0745799 9.7154631 2.0529723 9.2188848 -0.2689906 5.7754378 9.8788856 9.8369533 9.3703853 11.5882482 9.4262729 10.4440015 3.1233682 10.5070664 10.1190620 6.1573085 9.0025076 1.7310529 8.9258016 15.4574890 7.2845586 10.8744279 11.2178797 8.0348254 2.9009730 5.7971349 8.7282243 11.2067781 12.2726253 NA 4.8185080 6.8238016 9.5741806 11.5496269 9.0302528 5.8499868 6.1319249 10.2148604 11.5804498 1.5383892 13.2469909 5.1904766 6.4792370 12.5577918 14.4885909 12.5250543 8.5335610 10.6779509 10.9661614 10.5168650 11.1695767 4.5124039 8.6573406 11.4227882 11.2997134 -0.2689906 10.6228283 8.8224800 -0.2689906 3.1240468 9.5998673 10.2653476 9.8972077 9.2808295 15.2557241 10.2546067 9.3337435 7.2427978 4.8395666 14.7083022 10.9928458 14.1950479 12.0764499 9.7366693 10.0204872 8.4401283 9.8253072 -0.00054560 -0.00054560 0.30602000 -0.33172000 3.65690000 0.00417210 0.27207000 0.00458890 0.00347760 3.65690000 0.01480000 0.34975000 -0.01048800 -0.01967800 -0.30979000 2.31390000 0.22100000 -0.00068419 -0.00068419 -0.02259800 0.00638420 0.01154800 -0.32158000 -0.00870580 0.31098000 -0.01049900 -0.01049900 -0.01049900 0.00806560 -0.00054560 -0.00054560 -0.00662320 -0.32495000 -0.32798000 -0.32390000 0.26535000 0.24514000 0.00458890 -0.32866000 -0.33259000 0.00117950 -0.33940000 -0.31738000 -0.32076000 -0.32076000 0.00306100 0.00306100 -0.01967800 -0.01967800 -0.30979000 -0.32206000 -0.00068419 -0.00068419 -0.00068419 -0.02259800 0.00860470 0.01531600 -0.00189910 -0.32158000 -0.00870580 0.00834400 -0.01049900 -0.01049900 0.00264450 0.00750890 0.00653510 0.000 0.000 -0.288 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 -0.288 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 9.5796676 14.7657792 8.7917405 10.7018696 1.9774631 11.2171255 2.5383892 0.3160299 8.7603317 9.7890364 -0.2689906 9.0604598 2.0529723 10.1271143 9.0808788 2.0529723 10.1201382 9.3512646 9.0597195 10.5952308 9.2383140 7.1276498 11.8095291 3.6852450 8.1573095 10.4440015 5.0529723 NA 11.1044536 2.0529723 12.7006111 12.7283124 9.3856808 9.4555586 8.6939406 9.3604014 4.8185080 2.3160009 -0.2689906 4.5124039 8.5718228 9.8473886 11.4863496 5.7534120 7.8076731 5.1739869 9.8890231 6.6735593 9.9233374 NA 11.6035272 4.0885996 4.9978298 9.4115800 6.1066917 7.0118154 9.9754085 8.5432221 8.9514231 1.7310529 13.6690621 1.0529723 10.8842801 NA 7.5983235 6.3160063 8.0187571 9.1136687 12.361581 5.613688 8.276009 13.193355 10.205258 10.570642 11.994754 10.762057 9.425403 10.812195 13.316418 10.649908 11.206778 8.522208 NA 7.535176 10.472090 11.869636 7.849986 8.595231 9.006005 7.535176 10.375586 7.148898 7.452144 10.533965 7.643934 3.190473 5.818508 6.743502 12.514759 10.390595 7.823802 8.648417 11.510148 6.708325 9.370385 10.522615 10.246252 10.249698 10.924878 8.771334 9.091892 9.472444 7.959094 7.592132 11.549627 9.070895 11.084699 10.214860 7.270204 14.123932 10.077004 10.167236 12.967806 10.590191 9.668418 3.900973 TCGA-BH-A0DK 49 0 NA 423 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white NA 61.60.0 3 2 2 3 2 4 3 3 3 3 NA NA 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.752118e-06 3.337367e-07 11.0032757 8.1312293 6.6873449 11.6216925 -1.1520031 9.5743593 1.4331197 9.6723044 11.4510720 7.6063645 10.3765952 8.0841552 9.0984396 9.9375917 7.8732805 9.0781618 9.3499785 9.5424991 7.7935851 5.1519237 9.4331036 10.5559316 13.8786790 9.3177830 9.1416129 10.6955901 8.1700693 9.8753560 1.1700532 1.1700532 9.3289314 12.7282029 12.6212804 7.9488035 11.5927648 13.3277320 9.6490411 6.8979894 3.4919942 6.3399943 8.4084741 9.3834166 7.5276217 12.4176408 2.1700853 11.5900295 13.4218475 5.0180644 9.7363136 10.3589053 8.2972900 6.1335430 -1.1520031 15.1984221 10.6971552 0.4330663 7.9978885 3.7550371 6.4027307 9.3726829 10.5879218 9.4738500 9.9169195 9.6130128 10.3404952 2.3075742 10.8867173 10.2089883 5.1700693 8.4141952 1.6554892 10.5059062 15.1968521 8.4961391 11.1046447 10.5210084 9.7759192 -1.1520031 4.9142296 8.2166474 9.5786114 11.4854453 NA 5.9249574 7.4141956 10.2967738 11.4550090 7.4141956 7.2056936 4.8254193 9.9047790 11.6740937 3.3716982 13.6280657 4.2404594 7.3279217 12.2913438 12.8022466 12.6097963 8.1427621 10.2139169 10.9573189 10.2974755 10.9582982 4.3399925 8.9540497 11.4928988 11.5946555 0.8481572 10.3756182 9.0673096 0.4330663 2.3578335 9.5580866 10.9302902 9.7684940 8.5996853 15.3149346 10.0533236 9.5072452 7.4591660 3.8925367 15.4742495 9.7602820 12.8519226 12.5279511 9.4765866 10.5263012 8.1857630 10.2925090 0.00765390 0.52485000 0.51455000 0.00708260 0.52241000 -0.00609040 0.00763920 0.00000000 -0.00825050 0.01279500 0.00507150 0.00507150 0.01140000 0.01038600 -0.52798000 -0.53073000 -0.53073000 -0.52961000 0.00159430 -0.54121000 0.01600600 0.02076300 -0.52736000 -0.52736000 1.26730000 0.00638710 0.00638710 0.01042400 0.03369000 -0.52440000 0.00765390 -0.00788630 -0.54260000 0.02426800 -0.00609040 0.00763920 -0.00062611 0.00000000 0.00000000 -0.00825050 0.01070300 -0.04915400 0.01553700 -0.53297000 -0.53297000 0.00652620 0.02398700 0.01038600 0.03990200 -0.52798000 -0.53073000 -0.52961000 -0.00640170 0.54294000 -0.53666000 -0.00154490 0.01488800 -0.52092000 -1.04350000 -0.52736000 0.01600600 0.00638710 0.00638710 0.03369000 0.01363200 0.03199900 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 10.0067509 13.3859056 6.3873005 10.0010598 4.6790071 11.3741513 3.9356012 0.8481572 8.6376747 8.8979897 1.6554892 8.8052431 3.8023380 10.6225165 9.2231807 0.4330663 10.1796180 9.5477136 9.7123273 10.2296842 9.5390558 6.9142308 12.0045403 2.8481372 8.2296840 10.3404952 6.0769609 NA 11.0630674 2.7550371 13.4137193 12.1075902 9.2500873 9.8132040 10.3344734 9.7899224 4.9774265 3.4331063 -1.1520031 4.2744033 8.3658106 10.3374874 9.9162476 4.7788761 6.6914337 7.2012878 9.9095124 6.3075724 9.7384054 -1.1520031 11.0685195 4.8481422 4.7061216 9.3614346 4.9287967 7.6873449 10.0527123 9.1857630 11.6500516 6.1149271 13.9458441 3.2404517 10.4457283 NA 8.4368560 7.1055293 7.7277245 8.8066940 12.195260 6.291084 8.238310 11.592765 10.277025 10.501434 12.417641 9.978068 8.663524 10.369251 13.314728 11.550747 9.578611 8.928959 1.433120 7.201288 11.539449 11.2242665 5.9356035 9.0829585 9.4065620 7.7307839 10.2805996 8.2972900 9.0392004 9.3177830 7.8788081 1.4331197 5.9356035 7.6624355 11.5959146 10.5925546 8.0054881 8.4160974 11.9809622 8.0280503 9.4738500 11.1122905 10.3504758 10.5653892 10.9873727 8.9474891 0.4330663 9.1070251 7.7565937 8.9915244 11.4550090 7.0130479 11.0972546 9.9047790 6.9461729 13.9008790 10.3039821 9.8822524 12.3265316 11.1782177 9.3489830 4.8481422 TCGA-BH-A0DL 64 0 NA 1467 breast stage iia t2 n0 m0 2-10-2014 female 2007 NA NA other specify yes 0 white not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.899646e-07 1.39057e-07 12.4422885 3.1628706 6.2992502 10.9242000 -0.6950218 10.0455211 NA 9.5628741 12.0452048 10.1480329 9.1768022 7.5504498 8.6391703 10.1519543 5.8517915 10.0463640 11.5353678 10.6497477 8.6200464 7.4290183 11.8552831 11.2306369 13.3289545 10.3307287 9.8146720 10.8493785 6.4029285 10.3591622 3.6268246 0.8898629 8.1644318 9.7796169 12.2855721 5.5045695 10.9695665 11.3766945 11.3926913 5.0328194 1.1122331 6.0993120 9.0681094 9.0429893 8.2992506 4.7967483 0.3048615 10.4922491 10.0854367 8.0446777 9.3190360 10.9214459 5.3601781 6.6536247 0.3048615 13.8775297 10.2345253 1.1122331 9.7684214 -1.6952553 5.9122283 9.5786925 10.0264234 8.9878916 10.7917320 9.2378500 10.4286952 -0.6950218 10.8059878 10.0518312 6.1250766 7.9983840 -0.6950218 9.0763865 14.4998462 7.6981372 10.5158727 9.7174669 11.2950010 0.8898629 NA 8.6256975 10.0387598 12.4629544 -0.1101371 4.0328150 6.8823264 9.0446777 11.2057638 5.2474111 7.4495556 5.0191414 10.5459864 11.9615453 1.8898629 13.0238044 3.0053281 5.6447475 11.2973044 14.4049022 12.8877446 4.8440542 9.5192162 10.7308997 10.1717586 11.7323408 4.8126933 8.1441009 12.9661184 8.8077288 -0.1101371 9.6596973 10.0005603 4.6447446 3.3138843 10.3963324 10.8764127 9.4463656 10.1848631 15.1857121 9.8742780 9.9319749 8.2590936 -0.1101371 12.6409153 10.4562308 13.1122016 12.5016528 9.7735210 9.7836667 7.1597654 10.2354644 0.5478800 0.5478800 0.5478800 -0.2896400 1.6138000 -0.2464200 0.6095500 -0.1093300 -0.1093300 0.2601200 0.8102500 0.8102500 -0.0776110 -0.0776110 -0.2930100 1.1595000 -0.0310860 0.4947600 -0.0438730 -0.2974800 0.2004500 0.3652600 -0.2241400 -0.2241400 -0.0280810 -0.0797420 -0.0797420 -0.0797420 0.3339900 0.4356700 0.5478800 0.2039600 -0.2896400 0.2175200 0.0417410 0.0000000 0.0000000 -0.1093300 -0.1093300 -0.1093300 0.2084000 0.1286600 -0.3002800 -0.2815600 -0.8207300 -0.0818710 -0.0818710 -0.0776110 -0.0776110 -0.3002800 -0.0310860 0.0228650 -0.0438730 -0.0438730 -0.4680500 0.2004500 0.2757900 0.2157600 -0.2241400 -0.2241400 -0.0088526 -0.0797420 -0.0797420 0.3339900 -0.0645080 -0.5189700 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 0.076 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 0.076 8.8860977 13.4559136 5.2356352 8.6961406 3.9487503 10.3372872 2.5528197 8.6234397 9.4741957 8.8614030 -1.6952553 6.9878916 9.5786925 10.8707131 9.4578157 3.2590917 6.9122271 10.8399294 7.7806303 9.7057765 9.4721835 6.8898592 9.8642741 4.1875382 7.2821766 10.4286952 2.2117910 NA 10.7261729 4.8747527 12.7438838 12.8008145 6.8633178 9.1250761 11.8771235 8.7581676 5.7643276 3.0053281 -0.1101371 -1.6952553 8.2836074 9.4153803 6.0730811 2.3923724 9.8901694 8.5611058 10.1126544 8.5397145 9.2850366 0.6268596 10.3807104 3.6268246 4.1377904 9.5145271 5.5869659 7.9826166 9.0165640 9.3540649 9.2532641 12.4199407 13.4690183 -0.6950218 10.7982521 NA 9.1258737 2.7643249 8.4622438 7.9487533 13.3361373 6.8747527 8.2072721 10.9695665 10.0952455 11.1248765 4.7967483 9.7524969 8.9992548 11.5917161 13.5370556 11.1766098 10.0387598 7.0463645 0.6268596 8.1122518 11.0664483 10.254724 2.764325 9.794745 8.947851 9.469804 9.580771 7.092799 9.230451 10.330729 3.764325 -1.695255 8.762278 9.797842 12.785561 10.266347 8.830418 9.189067 8.229710 8.287891 8.987892 10.968900 11.270862 11.477481 10.455279 9.058949 NA 9.743086 6.464768 9.748877 11.205764 4.552826 10.942880 10.545986 8.124086 14.069587 10.840415 10.846962 13.325183 9.939708 9.412114 3.059788 TCGA-BH-A0DO 78 0 NA 525 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 5 2 2 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 1.39057e-07 10.7666511 7.8183406 7.3638614 11.3247493 1.1318528 10.7360844 NA 9.7048561 11.9273386 8.9424116 9.9461555 8.5525020 8.9856695 9.1916352 8.4462343 8.7732899 11.0586302 9.4590184 7.9391948 0.5468574 10.9544109 10.7942117 12.8810810 11.3616602 9.9631472 10.4409374 4.3282405 10.3610515 0.5468574 0.5468574 7.8414983 13.2865527 12.6239436 7.7168023 12.9770034 13.6463076 9.6651698 7.5581046 5.2883438 6.8368962 8.5953645 10.5327195 8.1449299 13.3052569 1.7168153 10.9246304 13.7794859 7.5636859 9.5523267 10.9562685 9.7599817 5.6343406 NA 12.9311122 8.4637573 4.2747984 7.4687185 1.3542265 3.5468821 10.3546350 10.4761360 10.3939349 11.4825951 10.3610595 9.9005758 2.6343377 12.0714193 10.5180618 7.0625772 8.0782592 8.1052983 12.0661452 14.3482575 6.8724976 11.7326822 11.3724327 8.8089725 1.5468574 3.6761658 8.8822680 8.9219171 12.1031441 -0.4530438 3.3017632 7.2747984 9.7630171 10.8259077 7.4776150 5.5692450 3.9731429 10.2082103 11.9611664 -0.4530438 13.4239220 5.1167349 7.8755528 12.7615002 11.5123011 12.9647960 8.3970645 10.2139891 10.8908960 10.7076692 11.3308989 5.1467896 8.4702049 11.9626193 11.8755525 0.1318528 10.0850665 8.8264881 0.8688448 4.2761616 10.0387307 11.0286770 10.7810962 9.0546721 15.0862787 10.2442795 9.9583886 9.2237162 4.0387347 16.6463589 10.8130784 13.6585023 12.4367617 10.2399288 9.7477761 8.5496927 11.0423804 -0.00719580 0.76523000 0.76523000 0.00000000 0.00000000 0.00097064 -0.00055444 -0.00429290 -0.00429290 -0.00456950 -0.00456950 -0.00719580 -0.00589860 -0.00011988 0.39214000 0.38899000 0.38899000 -0.00816240 -0.00816240 -0.00174130 0.00138680 -0.00235530 -0.01807800 -0.01807800 -0.01807800 0.35218000 0.35218000 0.35479000 -0.01041600 -0.00719580 -0.00719580 0.00277450 0.00000000 0.00097064 0.00056701 -0.00055444 -0.00124730 -0.00429290 -0.00429290 -0.00113050 0.39562000 0.39562000 -0.00456950 0.00041593 0.00041593 0.00041593 -0.01387500 -0.00011988 0.00597000 0.39214000 0.38899000 -0.00816240 -0.00816240 -0.00816240 0.00152550 -0.00899060 -0.00235530 -0.43102000 -0.01807800 -0.01807800 0.00666530 0.33003000 0.34523000 -0.00110870 0.00680440 -0.01464100 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 8.1907339 11.7153930 6.4716898 9.5426448 4.5075727 10.5678575 2.5468821 0.1318528 8.7080096 8.5553062 -1.4532413 8.1542080 3.0063160 10.0332097 9.8523694 1.3542265 8.6514762 9.7230506 10.2786209 9.1680137 9.8684619 8.0306931 10.3416995 1.5468574 9.9991188 9.9005758 3.1907413 -1.4532413 9.8800328 4.4776126 13.4515592 12.0975041 7.3702445 10.4325739 7.1871224 9.2959090 5.2883438 1.5468574 1.1318528 0.5468574 9.0114232 9.3134064 10.6143119 6.2193021 7.9895932 6.2815870 10.3852936 6.9898214 9.5383995 -1.4532413 12.3300804 2.2473199 4.6761602 9.8263953 6.2801639 5.3017669 9.1780545 7.1430668 6.9391948 NA 13.9298730 0.1318528 10.0512000 -1.4532413 7.7440945 6.1318405 7.4981623 8.7792985 13.1448137 4.9219171 8.3923677 12.9770034 10.5709783 10.9340871 13.3052569 12.7918359 9.7205547 10.9175650 13.3594560 10.5806447 8.9219171 9.3726313 0.8688448 7.2984219 11.8184865 11.118156 8.086036 9.224597 8.375014 7.658013 10.358529 5.868805 6.489392 11.361660 5.512663 5.038730 7.363861 4.818155 12.490491 10.310505 8.310090 8.124306 13.697141 6.546877 10.393935 10.237749 11.290029 9.694083 10.680662 9.451512 NA 9.478206 7.260711 7.462757 10.825908 5.804265 10.842354 10.208210 7.208656 14.114475 10.092807 10.935433 13.230311 10.819507 10.178509 2.006298 TCGA-BH-A0DP 60 0 NA 476 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 0 white NA 61.60.0 5 2 3 2 3 2 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.112456e-07 10.8602955 6.8385094 6.6481778 11.0784523 0.7777879 10.7055917 -1.2222962 9.7399868 11.7788700 8.4643142 9.5493032 8.5722295 9.4369176 9.1209993 8.4252721 9.4765184 9.8187883 9.8126126 7.5819447 2.2372578 9.9521153 10.3481438 11.9581891 11.4293139 9.9109560 10.4782534 5.8222075 10.2821362 NA 5.5459992 8.4234723 12.0145754 12.3877727 6.7664984 12.6480821 12.8950509 10.7732276 6.5787138 2.8652854 6.7026257 8.4162495 11.4089907 8.5608120 12.8920440 0.3627785 11.6233037 14.0250366 7.4713005 9.2672303 10.4171544 8.4678118 5.7320114 NA 14.5539416 12.3379136 2.8652854 7.7464807 -0.2221280 4.9872663 9.8036454 10.0844450 10.1544817 12.1613830 9.6334608 10.1353657 3.0257376 11.5550690 9.9064525 7.4252721 9.1165501 4.6847065 10.6283912 14.7676295 8.0769989 10.9192823 11.3244670 10.4026091 2.0997328 2.8652854 9.1287530 9.1042431 12.1066289 NA 5.5851699 7.4395916 10.0827353 11.5347869 7.2166052 6.3400566 5.1353666 10.1972473 12.2263172 2.4782470 13.4239786 6.7721667 7.3052911 12.6463469 12.8205845 12.6440301 8.7290983 10.1776257 11.3309630 11.0764491 11.1031191 4.9477410 8.2413383 12.2911712 11.1917060 -1.2222962 10.4333445 9.0304790 2.8652854 2.8652854 9.8876444 10.6661764 9.7876422 9.1956663 15.1874532 9.6741462 9.9464858 8.3072441 4.3627785 15.3530722 10.0672563 13.3593674 13.4686847 10.3179418 9.7536617 8.0974860 11.0399731 0.6415800 1.2941000 1.2962000 -0.0138150 -0.0138150 -0.0286280 0.3178700 -0.3286700 -0.3286700 0.3161000 0.3161000 0.3113500 -0.0129890 -0.0190180 0.2407800 0.2407800 0.2407800 -0.0151910 -0.0151910 -0.3595400 -0.0035455 -0.3472100 0.1266800 0.1266800 0.1266800 0.0055529 0.0055529 0.0055529 -0.0008316 0.0000000 -0.0088526 0.0033299 -0.0138150 -0.0286280 -0.0286280 0.3178700 0.3178700 -0.3286700 -0.3286700 -0.3286700 0.6044900 0.6044900 0.3161000 -0.0532060 -0.0532060 -0.0532060 -0.0532060 -0.0190180 -0.0176660 0.2407800 0.2407800 -0.0151910 -0.0151910 -0.0151910 -0.3595400 0.0037465 -0.3469800 -0.3788700 -0.3631800 0.1266800 0.2856400 0.0055529 0.0055529 -0.0011726 -0.3489300 0.0058309 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.236 0.127 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.236 0.127 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 9.0469404 13.2659676 8.6619843 10.1092906 3.8417518 9.9458590 -0.2221280 -0.2221280 8.9969821 8.3227781 0.3627785 8.5406942 3.4782470 9.8398598 9.1452283 2.0997328 9.2082663 9.2166055 11.2828809 8.6907031 9.3484378 7.4643146 10.6205569 4.2372425 9.0352016 10.1353657 3.9872663 NA 10.6711152 4.2040781 13.6921054 11.9365812 7.5787138 10.0707104 7.9427203 8.8586313 3.8222101 -1.2222962 0.3627785 8.8876444 8.6264366 9.6892057 10.4311066 5.8439035 7.5912418 7.3324027 10.0162184 6.1087314 9.2155658 0.3627785 11.5281019 4.7778142 3.9070926 10.1398287 5.8870695 4.7320086 10.5575330 8.8043372 7.6450928 NA 14.0552464 -0.2221280 10.2979412 -1.2222962 8.9389456 4.7550959 7.9402049 8.3130889 13.181145 5.135367 8.322778 12.648082 9.974416 11.135641 12.892044 12.340175 9.338146 10.695932 13.721382 11.234425 9.104243 9.225930 1.947741 6.849276 11.632682 11.033727 7.830381 9.046940 8.827662 8.425272 9.998259 7.216605 5.635795 11.429314 7.907097 4.063218 8.666557 6.600289 11.472824 10.710398 7.843903 8.086153 13.025370 5.927560 10.154482 10.649334 11.231599 9.806410 10.686957 9.129857 1.585155 9.421210 7.362363 6.702626 11.534787 7.734916 10.171354 10.197247 7.396420 14.577728 10.051609 10.831061 13.122942 10.285113 9.505734 1.362778 TCGA-BH-A0DQ 42 0 NA 98 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white NA 72.63.0 8 2 1 2 NA NA 1 3 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 8.343418e-08 11.853803 8.579351 7.088364 10.751671 0.293959 10.878598 2.030901 9.934796 11.798933 7.522767 9.661727 7.426662 9.133152 9.866333 7.391981 8.824030 9.829872 10.111998 7.723006 4.030910 10.127366 10.173532 14.113362 10.325075 8.987435 11.073668 5.554475 9.890101 0.293959 0.293959 8.992074 11.310757 12.490141 8.525969 12.090529 13.366081 9.819469 5.674771 1.030901 7.263574 8.431793 7.126839 8.019599 12.415266 0.293959 10.572785 13.546072 3.615875 10.054851 10.534342 9.249114 6.541876 1.516318 13.601003 8.611361 2.878902 7.725794 NA 5.232549 9.593920 9.668988 10.604561 10.556435 9.572398 9.525970 1.516318 10.880163 9.831167 7.405953 7.388466 10.558782 11.033448 14.972475 7.593676 11.716539 10.671159 7.925732 1.708982 5.898811 7.845977 9.166367 12.540590 NA 7.487063 7.856191 10.272659 11.440941 8.039903 5.101301 4.686265 9.985110 11.941707 4.232546 13.804136 6.436906 7.433499 12.279909 13.244322 12.522166 8.769682 11.188008 10.724052 9.727186 10.977235 4.323694 8.946196 11.808169 11.698913 1.293959 10.593538 8.895100 1.030901 2.412754 9.468874 10.884224 9.045492 9.293948 15.076759 9.844054 9.799098 8.310757 3.352843 14.779212 8.872635 12.914626 11.496684 10.023003 9.699799 8.261655 9.722762 0.01373200 0.01373200 0.61063000 -0.00425820 0.62812000 0.01880300 0.01223700 0.60539000 -0.04807200 0.01463700 0.01463700 0.36374000 -0.00287810 -0.00180140 -0.00050297 -0.00050297 -0.00050297 -0.65529000 0.61286000 -0.63472000 0.01265500 -0.00912860 -0.01092200 -0.01092200 -0.01092200 -0.12356000 -0.12356000 -0.12356000 0.65332000 -0.02151000 0.01373200 -0.01697900 0.00364820 0.01283700 0.01734800 0.01223700 0.04315700 0.60539000 -0.63906000 -0.04807200 -0.00883080 -0.00156040 0.01463700 -0.47268000 -0.47922000 0.45272000 0.45051000 -0.00180140 -0.00180140 -0.00050297 -0.66420000 -0.65529000 0.61286000 0.61286000 -0.63472000 -0.02720100 -0.00912860 -0.01011200 -0.01092200 -0.01092200 -0.65015000 -0.12356000 -0.12356000 0.64268000 0.01181800 -0.70854000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.479 -0.029 0.000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.479 -0.029 0.000 8.8240295 14.6699833 6.6976710 10.4948470 4.6631795 11.5998202 1.5163178 1.0309010 8.3989839 9.0851112 -0.2910624 8.8738928 4.1013055 10.5587819 9.0731205 2.7964524 9.3107566 8.9966983 7.7341257 10.3729887 9.5416306 7.6308270 12.0829385 1.8464733 8.4317934 9.5259696 4.4903455 4.2939516 10.7434410 3.8382660 12.1154567 12.1680332 8.9990047 9.5739457 9.3005081 9.2452330 2.8789019 -0.2910624 1.7089818 3.4094317 8.7871366 9.8801627 10.0297865 6.5607348 8.8046993 6.7033388 10.2043413 5.6397242 9.3510375 NA 10.1061257 2.2939590 4.4903455 9.7696075 6.2021199 3.9569116 9.9226977 8.8789108 8.1684174 NA 13.7252284 0.2939590 10.8760904 NA 7.4470783 5.8789117 8.6646357 8.9366017 13.006189 5.012765 8.376098 12.090529 9.621127 10.791800 12.415266 12.033729 9.155035 10.215293 12.890060 9.368090 9.166367 8.562295 1.708982 7.648565 11.458017 11.351940 6.639723 9.170465 8.952160 8.753380 10.744032 6.263575 8.745160 10.325075 7.147778 3.615875 6.331037 7.013269 11.024985 10.057714 9.042141 9.129999 11.668263 5.168417 10.604561 10.457598 10.338798 10.363622 10.741720 8.697671 NA 9.034752 7.615877 5.503403 11.440941 8.079673 10.082395 9.985110 7.660270 13.471005 10.566967 10.069833 12.244626 10.525970 9.437757 1.293959 TCGA-BH-A0DS 71 0 NA 78 breast stage iiia t2 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 8 white NA 61.60.0 6 2 5 3 3 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.668684e-07 10.5729689 7.0498616 6.3336545 11.2652363 1.2632748 10.4819495 NA 9.4688142 11.3602439 10.4766126 9.3634020 8.2677666 7.1012088 10.0114580 7.2767274 9.0446250 9.5337942 9.5788678 6.9186176 4.0706212 9.9870968 10.4707678 11.9280681 10.9139580 9.1360940 10.1981356 5.7615167 10.1827067 1.5263193 6.6760473 8.3400806 10.9268234 12.7102451 8.2010805 12.9276236 12.8862322 10.1904507 7.9300217 5.4170694 6.2900649 8.1162629 10.1030989 7.1845114 13.2343058 1.7486759 10.8155501 14.1721832 4.6417772 10.0470231 11.1653389 8.0020330 9.1845112 0.9413317 14.1238506 8.9328590 2.4007565 8.2922765 0.5262692 4.8955353 9.5178215 10.2010804 10.4291772 10.3744009 9.5384586 9.4978433 6.0808879 11.0475729 9.3904858 6.4089428 8.3379421 5.2811864 9.8101597 14.6618219 5.6780775 11.2261613 10.6022244 11.7639080 -1.0585932 6.2632654 7.8178541 8.7773875 11.8652217 NA 7.2767274 6.9525642 9.9035101 11.2942082 4.7226955 6.0287990 5.8239811 10.2789591 11.3920329 NA 13.7311764 7.0127999 7.8779749 12.7472825 13.9052718 12.4487602 7.9637047 10.3987180 11.5479737 11.0218749 10.4411830 2.6417772 8.7226969 12.2946218 10.5919402 NA 10.3539070 9.4431744 2.1112651 3.1930620 9.5977621 10.1773514 9.9164686 8.8361548 15.3325472 9.5234792 10.8455954 8.0936220 3.8482273 15.7682580 10.6819612 12.9230828 11.3899697 9.6031152 9.8459717 7.7194141 10.7307974 -0.0657780 1.4328000 1.3275000 0.3624800 0.3603100 -0.0951690 0.2452900 -0.0748110 -0.5539700 1.6685000 1.6685000 2.6954000 0.5524800 0.3821500 -0.0703020 -0.0710710 -0.0710710 -0.0406650 -0.0691580 -0.0833330 0.5420700 0.4510500 -0.0200010 -0.0200010 -0.0200010 0.0129340 0.0129340 0.0129340 -0.0402090 0.0000000 -0.0657780 -0.0058140 0.3603100 -0.0579240 -0.1013200 0.2452900 0.2452900 -0.0748110 -0.5539700 -0.0866510 0.7501300 0.6732600 0.5329200 -0.0712050 -0.0712050 -0.0712050 0.0146090 0.3821500 0.3821500 -0.0703020 -0.0710710 -0.0313590 -0.0691580 -0.0691580 -0.0833330 0.5420700 0.4492400 -0.7072900 -0.0200010 -0.0200010 0.5410100 0.0129340 0.0129340 -0.0603450 0.2061000 -0.0029091 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 8.79308628 13.43143591 6.51119286 9.32612092 4.33365271 10.57478650 1.94133171 -1.05859316 8.89116397 8.02348602 NA 8.42632095 2.74869737 10.44267680 9.00877147 0.52626917 7.92433093 9.31528975 10.22558295 10.70247280 8.79645467 6.52629891 11.01011545 2.39022744 9.66840672 9.49784326 3.58519091 NA 10.73372082 3.26325981 13.17921931 11.82646153 7.91575153 10.11000925 8.07832803 8.98709685 2.84823734 2.26327483 -0.05859316 11.05638078 8.21746145 9.83160145 10.01145804 6.29888922 8.09072854 7.74546795 10.34754220 8.50929323 9.49015914 0.94133171 10.19636569 1.74867590 3.98572811 10.31261832 7.07108367 5.95256421 9.80552334 8.28118728 8.63133496 4.15078711 13.91749849 1.26327483 9.85870931 NA 7.84822794 6.44913213 7.77105957 8.88824339 12.033230 5.298889 8.638305 12.927624 9.916469 11.171057 13.234306 11.689740 9.122489 10.225583 13.648535 9.162924 8.777387 9.796984 NA 6.860201 11.433941 10.522067 6.991186 9.196354 9.060278 6.918618 9.973996 6.511193 7.648696 10.913958 6.872074 2.400757 6.533794 4.902267 11.571832 10.170156 8.484369 9.215133 9.762314 6.342217 10.429177 10.951166 10.707866 9.642644 10.306566 8.305472 NA 9.036734 8.070620 7.028800 11.294208 7.371790 9.915035 10.278959 7.126213 14.078609 10.319090 10.572514 12.475275 10.234234 9.326121 2.748697 TCGA-BH-A0DT 41 0 NA 1170 breast stage iia t1c n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 1 white NA 93.58.0 5 2 2 NA 2 1 3 3 3 3 4 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 5.562279e-08 10.5942523 8.5873744 7.7177354 11.1022017 1.4376539 11.0799371 -0.3697809 9.7774774 11.9188502 11.0499694 9.8311710 8.3220160 8.6540270 9.2394513 9.1171075 9.2884841 10.0861134 9.6909684 7.5698518 3.9522031 10.4655334 10.1877362 12.6151359 11.1704006 9.5364116 10.4250945 6.4820222 10.5826497 -0.3697809 3.4376272 8.4504516 12.4804593 12.5018890 6.8200972 13.1417163 13.1929919 10.0247352 9.1469573 5.3307126 6.5960570 8.5401656 10.0602023 7.8758249 12.7781929 5.5250917 10.5731535 14.5001073 6.5006380 9.6534862 10.6132661 8.1479421 4.6746640 0.2152437 13.5803964 9.6168256 1.9521844 8.6732999 -1.3695945 3.8781956 9.9993246 10.3137058 10.1601910 11.0732160 10.2175813 9.9740134 5.9878256 11.5768133 10.0204415 6.2523248 9.0669841 9.3281090 12.1314877 14.8382401 8.5691022 11.4518472 11.3341761 9.6358971 2.0897015 4.6963611 8.7787490 9.1557932 11.6712471 -1.3695945 6.0139758 7.3581932 9.6330875 11.2668971 6.3513721 6.1060070 5.0897058 10.5465252 11.8632929 1.4376539 13.4932488 6.2596284 7.7850908 12.9868620 12.8286408 13.0213818 8.3097528 10.3934848 11.4820215 11.1591880 11.2313468 4.4882515 8.6018161 11.7939222 11.4915533 0.9521844 10.3926545 9.2114732 1.4376539 3.0232731 9.6943415 11.3795134 10.3805607 9.0332845 14.9654709 10.1815002 10.0533885 8.7296204 3.3851549 15.3951182 9.9861741 13.4278834 12.7257519 10.1034709 10.0263421 8.1733044 10.8502638 0.00360760 0.93142000 0.93244000 -0.00512270 -0.00512270 -0.00981850 -0.00981850 -0.00912860 -0.00912860 0.41195000 0.41195000 0.40577000 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00277070 0.01530800 -0.00705760 -0.00788630 -0.00420200 0.00291490 0.01223700 0.01223700 0.01223700 0.01838300 0.01838300 0.01838300 0.01181800 0.00360760 0.00360760 -0.00091903 -0.00512270 -0.00981850 -0.01106000 -0.00981850 -0.00981850 -0.00912860 -0.00912860 -0.00912860 0.40911000 0.40681000 0.41195000 0.00138680 0.00138680 0.00138680 0.00138680 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00378510 -0.00332260 -0.00332260 -0.00788630 -0.00420200 0.00624810 -0.56992000 0.01223700 0.01223700 0.41396000 0.01838300 0.01838300 0.00087288 -0.00828380 -0.09723200 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 9.4408440 13.0880381 7.7646991 9.7420603 3.8397279 10.7958076 2.8002062 0.6303123 8.7164086 9.2403747 -0.3697809 8.1660727 3.4376272 10.1449865 9.3734240 0.2152437 9.5129156 9.2678031 9.8317838 9.7762047 9.5692860 7.0855999 11.0871403 3.4376272 10.0886791 9.9740134 8.6061205 NA 10.2709693 3.3851549 13.0835431 12.0765804 8.3220160 10.5033320 8.0897042 9.0290161 3.7177367 1.4376539 -0.3697809 5.6963611 8.2486582 9.1645754 9.9040681 5.4376272 7.5983920 6.0396626 10.3976294 7.0814834 9.4686886 -0.3697809 10.3988704 2.4376272 4.6302715 10.2688849 6.5798077 5.0732161 9.3598932 7.7543938 6.7800200 NA 13.9261132 -0.3697809 9.9369039 NA 9.4017621 5.6414998 7.9202915 8.5683818 12.788942 5.073216 8.970123 13.141716 10.381817 10.887955 12.778193 12.346770 9.259128 10.867482 13.469427 11.572420 9.155793 8.759556 -1.369595 7.488254 11.641325 11.266217 6.873447 9.254154 9.414089 8.188693 10.655644 6.431172 8.118113 11.170401 5.849441 4.934054 8.071142 5.815645 12.336553 10.409992 8.577179 7.949945 12.088166 6.089704 10.160191 10.484751 11.128623 10.092263 10.729620 9.275931 NA 9.411780 7.717735 6.911043 11.266897 7.005312 10.899814 10.546525 7.005312 14.241441 10.011815 10.413271 13.276719 10.897937 9.840944 2.330702 TCGA-BH-A0DV 54 0 NA 1374 breast stage iiia t2 n2a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 9 white NA 96.50.0 NA NA 2 5 3 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 2.781139e-08 11.4865482 10.7467868 6.4802506 11.0059014 3.0063160 9.5857047 0.2514464 9.7582349 11.7801297 9.3935385 9.6745473 7.7552575 9.3107759 9.8670611 7.2486107 8.7088121 9.7973611 9.7246298 7.9605152 3.7432888 9.1575705 11.0579810 12.9835989 10.9187648 9.3625672 10.5815080 5.4213580 10.1105779 -1.7485536 2.3388808 9.7740130 12.5756823 12.4655228 8.8392088 12.8232433 12.2825295 10.3302494 7.4584460 3.6437523 7.7452871 8.2598600 9.3148266 8.4125635 12.1376996 -0.1635911 11.4293181 12.9734384 6.0716104 9.8012161 9.6602919 8.8373327 6.3755521 NA 14.0281014 9.7759732 4.2514313 8.7944633 -0.7485536 6.5040976 9.6232081 10.0953524 9.7062448 10.4952005 9.9096429 10.3534071 1.9518861 11.1101895 9.8970899 4.8807884 8.5402974 11.0730061 9.3768449 15.5503353 7.9639584 11.3914623 10.8943856 7.9587905 2.3388808 5.2401158 8.2903502 9.2978735 11.3941767 NA 6.4011782 7.1968755 9.9331090 11.3911427 7.5890533 5.3909840 4.8807884 10.3077304 11.4746790 -1.7485536 13.9005472 5.4511023 7.2930909 11.9887844 13.1249236 12.5110276 9.0154736 10.1673108 11.0855074 10.6846308 11.2313924 4.9238575 8.1613244 11.4461883 10.6727073 -1.7485536 10.5132325 8.6416002 -0.1635911 2.4205632 9.4350668 10.6729703 9.8734832 8.5597706 14.9631791 9.9987853 9.1109661 6.8734835 5.2401158 15.4874456 9.7026425 13.8418138 13.3829669 10.0079878 9.7749934 8.2143274 10.3699086 0.17752000 0.17752000 0.48811000 0.00715020 0.01829600 -0.00201110 0.01523600 -0.00034850 -0.00034850 -0.00699050 -0.00699050 -0.00699050 -0.00048710 -0.00048710 -0.00131850 -0.00131850 -0.00131850 -0.00048710 -0.00048710 -0.00118000 0.06155800 -0.00560860 -0.00076428 -0.00076428 -0.00076428 -0.00367230 -0.00864760 -0.00864760 -0.01374800 0.17752000 0.17752000 0.00173170 0.00715020 -0.00201110 0.00000000 0.01523600 0.01523600 -0.00034850 -0.00034850 -0.00034850 0.00993460 0.00993460 -0.00699050 0.00854190 0.00854190 0.00854190 0.00854190 -0.00048710 -0.00048710 -0.00131850 -0.00131850 -0.00048710 -0.00048710 -0.00048710 -0.00118000 0.02547800 -0.00560860 -0.22425000 -0.00076428 -0.00076428 0.00979530 -0.00367230 -0.00864760 0.00756760 -0.00781920 -0.00886980 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3422054 13.8818692 6.7271649 10.9200948 3.0989248 10.7587306 0.8364089 1.9518861 8.3507792 9.5523559 NA 9.3656877 4.1583209 9.8789653 8.7681165 1.4213714 11.2424217 9.7552571 11.3816802 9.9703924 9.3658764 6.5957274 12.6360128 3.0063160 8.7139336 10.3534071 6.2514313 NA 10.8982152 3.1583209 13.0017197 12.1157143 9.5552122 10.3897032 8.1432153 9.1762440 3.3807156 0.5733745 NA 6.7710682 8.7005802 9.5035056 9.7422823 7.3121269 6.9555081 5.4802490 10.2415354 6.6264713 9.5912815 -0.7485536 11.5778609 3.4993612 5.2514313 9.6603609 6.2616512 3.7432888 10.3501215 9.8231841 6.9518710 NA 13.7897719 3.1094107 10.5085245 NA 8.2358501 8.2654519 7.5414506 9.3599560 12.135220 2.951868 7.953604 12.823243 10.119482 10.782325 12.137700 11.244724 9.093782 10.554356 14.093610 11.532637 9.297873 10.109801 NA 6.794463 11.232107 11.425109 6.301280 9.069215 8.602371 7.566581 10.088346 6.140175 7.858762 10.918765 6.843888 3.338895 4.359957 5.854390 11.936290 10.497578 8.440020 8.284855 11.833456 5.591281 9.706245 10.258108 10.858762 10.663472 10.799049 9.281409 NA 9.276848 8.460885 6.115618 11.391143 8.696446 10.472602 10.307730 6.851344 14.163502 10.017546 10.857837 12.988256 10.166190 9.079568 3.006316 TCGA-BH-A0DX 62 0 NA 1442 breast stage i t1b n0 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 8 2 2 NA NA NA 3 3 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.734514e-06 1.387612e-07 11.1978852 7.1438597 8.0817982 11.2552421 1.3813388 9.3651665 1.1589833 9.9711435 11.7130753 7.8313915 9.1692611 7.1014809 8.6494829 9.1978853 8.7338749 9.7699910 10.9865736 10.3078664 7.7464310 4.0658566 10.3973709 10.8204474 15.1030376 10.3610900 9.0148727 10.9825988 5.5740046 10.3961762 NA 2.8219347 8.9512142 11.8713499 11.7587241 8.4147816 11.5871518 13.2230353 10.8714932 5.5397885 3.0975602 7.0002682 8.3925858 11.2368946 8.4898829 12.9189237 NA 11.6214684 13.6619223 3.2178666 9.3871434 10.8510004 8.5612677 10.4420545 2.9663197 14.3955462 11.5900789 2.9663197 8.0436453 NA 5.1887135 9.9321053 10.0936399 9.1495429 11.1769344 10.4347028 10.4021402 1.5740046 10.8760713 10.1743812 6.2178608 8.3355547 3.5281962 10.6939174 15.1080633 8.3630317 10.7644457 10.4532040 8.4241906 2.3813664 5.0817998 7.8028226 8.9960684 11.7486173 -1.4258500 6.6019104 7.1776298 9.1314673 10.9931738 6.5047411 6.5397885 6.9533817 10.3631297 11.7531353 2.3813664 13.5889831 6.2178608 7.4898833 12.5650826 13.0570637 12.7418138 7.4163542 9.7576390 11.0768355 9.9464225 11.2640016 4.1589671 8.8064246 11.4958446 9.6896977 0.1589833 10.4183171 8.8524530 -0.4260439 3.1187418 9.7949865 10.4574106 10.0400801 8.8981842 15.1491440 10.0179833 9.2587523 8.4194938 2.4808855 15.3166552 9.9177446 12.5866282 12.0474558 9.4005522 9.6286079 7.9512142 10.4864477 -0.34377000 1.78530000 0.29596000 0.02841700 0.03397200 0.00235810 0.00180300 -0.00843850 -0.00691950 -0.00097017 -0.00097017 -0.00097017 0.00000000 -0.00318590 -0.00318590 0.00124810 0.00124810 -0.00526100 0.19756000 0.01782400 -0.00124730 0.00180300 0.01056400 -0.35988000 -0.00152430 -0.00609040 0.00041593 0.00041593 0.02539000 0.00013863 -0.34377000 -0.01642900 0.02841700 -0.36397000 0.00235810 0.00180300 0.01782400 -0.00843850 -0.35099000 0.54824000 -0.00207840 -0.35282000 -0.00097017 0.00305220 0.00305220 -0.00354460 0.00132580 -0.00318590 -0.00318590 -0.00207840 -0.01285100 -0.00526100 -0.35931000 -0.35931000 0.01782400 -0.00124730 -0.35109000 -0.01828200 -0.36386000 -0.35988000 0.01167900 -0.00609040 0.00041593 0.02539000 0.00013863 0.00183250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.339 0.000 -0.362 0.000 -0.372 0.000 0.000 0.000 0.000 0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.339 0.000 -0.362 0.000 -0.372 0.000 0.000 0.000 0.000 0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 8.6481451 13.6879086 4.6400945 10.2060901 3.1589671 11.3627220 1.8959230 0.5739561 7.8959315 8.1850285 NA 7.8599838 4.7834567 10.6008729 9.3917868 3.5281962 9.3347236 9.0446627 9.2848102 11.5309243 9.5032104 7.8754999 11.2871754 2.5740046 8.9555468 10.4021402 6.2605037 -0.4260439 10.5441096 2.1589509 12.9398477 12.6011322 8.5991433 9.3869831 8.2033602 9.7199358 4.6400945 3.5281962 0.5739561 3.2744406 8.4718491 9.2384511 9.8022212 6.0086325 8.4268451 6.3877847 9.4898831 5.0334362 9.6394198 0.1589833 12.1097650 3.1589671 3.7439242 9.1605338 7.2976307 3.7032890 9.0837787 9.2223612 5.9833950 2.3813664 13.7418530 0.1589833 11.0213452 NA 7.2640015 6.3749038 8.1495429 9.0107152 12.774672 6.450520 8.513583 11.587152 10.033435 11.293606 12.918924 12.421550 9.302775 10.323756 14.179773 10.478262 8.996068 8.943601 1.574005 7.105385 11.435284 11.528018 6.057818 8.665439 8.107333 7.554143 10.874205 5.723750 9.423409 10.361090 6.817178 1.574005 4.355362 7.326785 10.791053 10.787108 8.568357 9.088718 10.946597 5.640092 9.149543 10.381761 11.884616 10.330143 10.670389 8.977016 0.895923 9.667685 7.199713 5.049735 10.993174 8.644125 10.872891 10.363130 6.634699 13.080869 10.902679 10.976749 12.487454 10.792870 9.606049 3.033441 TCGA-BH-A0DZ 43 0 NA 495 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 white NA 47.68.0 1 3 2 NA NA NA 2 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.140181e-06 2.39363e-06 10.9398780 4.0831453 8.9608855 10.8820990 NA 9.4122648 NA 9.5310510 10.8056073 6.4050700 8.6499563 6.7612135 8.0326761 9.6560310 5.6191929 8.9311382 8.2247373 9.6681037 7.0831410 6.2369460 9.9984232 11.0837047 13.3541373 10.7190407 8.6129621 10.4309841 4.6191958 9.5110825 2.3461627 NA 8.2409935 11.2783904 12.9185601 7.7384929 15.3336173 12.5962766 9.6830541 4.2206473 0.7612002 6.5161003 8.3869221 8.8001321 8.4300983 12.3912527 NA 10.2640449 12.8785316 1.7612002 9.1620927 10.3518002 8.7007924 8.7124978 0.7612002 14.9824944 12.4793179 -0.2387147 7.9210846 1.3461910 4.9311393 9.4976152 10.5194363 9.3138823 11.8998049 9.5293976 10.2590649 0.7612002 10.2010440 9.4754586 6.7612135 7.3003718 7.9559701 10.1758984 15.1368975 7.0602377 10.1780107 9.9298852 8.8879176 -0.2387147 3.2206395 6.9706662 8.7269974 10.9058714 NA 6.4754595 5.7384922 9.1578178 11.2610590 8.0966034 5.8273033 5.1535297 10.4967692 11.7636766 8.0279994 14.0238219 4.3461768 6.4891335 12.2945429 13.5632246 12.5446207 7.9900319 10.4633858 11.2570682 10.2690078 10.9510377 4.9706650 9.2964886 11.4997277 11.2615571 2.0831453 10.1132565 9.1121522 0.7612002 0.7612002 8.9803815 10.5119201 9.6145227 8.5194365 15.4339423 8.7891192 10.3186768 5.8486755 NA 15.4163525 9.8232593 12.7447412 11.5633256 9.2144838 9.2103618 7.2530665 9.7139544 0.65240000 0.02152900 0.00374650 0.01335300 -0.00221680 -0.05738500 0.00416320 -0.00304750 1.77320000 -0.00138580 -0.00138580 0.63573000 0.00527490 0.00527490 3.65690000 2.92530000 -0.64076000 0.03312700 0.00000000 -0.00885260 0.02553100 0.01698500 -0.00124730 3.65690000 1.95970000 0.00000000 0.00000000 0.00000000 0.02076300 -0.02630400 -0.64884000 -0.00857660 -0.64528000 0.00069327 -0.05738500 0.00416320 0.00416320 -0.00304750 -0.00304750 0.03891300 -0.37302000 -0.37696000 -0.00138580 0.00513590 0.00513590 0.00513590 0.00513590 0.00527490 0.00527490 -0.64728000 -0.64076000 -0.64471000 0.00000000 0.00000000 -0.00885260 0.02553100 0.01880300 -0.64781000 -0.63547000 -0.62751000 -0.00401620 0.00000000 0.00000000 0.02076300 -0.00249380 0.02876300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.585 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.585 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 8.8110616 14.7704732 5.8697382 9.7583926 NA 10.4564414 NA -0.2387147 8.0558339 9.6605700 NA 8.7808038 2.5685672 10.9639492 8.2886903 1.7612002 6.2369460 9.1706041 9.6407964 9.4014581 9.3003720 6.9411227 11.1021759 NA 4.9706650 10.2590649 5.2530665 NA 11.7762797 0.7612002 12.8192049 12.4149539 8.5127571 10.4336384 8.2610592 9.4771752 4.9311393 3.0831453 NA 6.2847751 7.9559701 9.8866267 10.5829871 5.4616530 7.9699839 5.6919501 9.9398780 6.2530665 8.9852149 NA 10.1088345 3.0831453 2.3461627 9.3889293 4.5788361 4.6681021 9.5392903 8.5588745 9.5474828 0.7612002 14.0353000 NA 10.3629840 NA 8.4720194 3.5685672 8.1492304 8.9084181 12.9662931 5.9311370 8.0921303 15.3336173 10.0808852 10.3395858 12.3912527 10.8326755 8.1874778 10.5384684 13.4264380 10.3914802 8.7269974 8.7470550 -0.2387147 8.5621130 11.0971617 11.200005 3.461646 9.696378 8.688991 7.412265 10.198653 5.910960 6.880154 10.719041 6.064995 3.761211 5.910960 6.225718 11.659437 9.794636 6.859245 9.490834 10.233904 5.405070 9.313882 10.542573 10.568568 9.181173 10.252064 8.738493 NA 8.224247 6.816496 5.869738 11.261059 8.311960 10.554003 10.496769 7.755567 13.700976 10.830663 10.125348 11.822922 10.388747 8.157818 1.346191 TCGA-BH-A0E0 38 0 NA 134 breast stage iiic t3 n3a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 10 white NA 61.60.0 4 4 4 1 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 11.9184200 2.6073422 7.1309144 12.0704685 NA 9.8964496 -0.7145386 8.7852707 11.7011665 6.0536088 9.1465117 7.7489489 8.1527036 9.1588689 7.9400610 7.4899956 11.1155438 9.6174612 7.4801819 6.7366360 10.4446654 9.5416335 13.4236166 10.6039676 10.7443439 10.1588689 4.5333515 10.3821399 4.9292797 4.8400150 7.4703001 9.5788965 12.5214390 5.3939481 12.0647337 12.0554692 7.3133311 6.6604638 2.0927825 7.0065236 8.2337922 7.4147081 5.5892062 7.7032772 1.6073422 9.1183148 12.4319934 8.9543097 10.0910478 10.0082322 7.3243435 6.1680683 0.8704239 12.0847408 8.7116897 3.9858647 9.2755288 10.0302585 4.0403138 9.7356049 10.7397241 9.6208151 8.8070251 9.1056037 9.5094265 6.1802434 11.2013041 10.7717570 4.9578496 6.4948780 3.7448607 9.1877999 14.0599030 7.4251806 10.7586231 9.9516487 12.8891670 0.2854614 2.0927825 8.6626353 8.9184199 9.0943889 NA 2.4553601 7.7530302 10.8197277 11.2334269 3.6777450 5.5522111 4.6777394 8.0201343 11.7540488 4.7772777 12.8637975 5.2627038 7.3461210 10.3008399 13.5886347 12.2612727 5.5333515 10.5568878 11.7463925 10.1680678 10.9498721 3.9858647 8.2540913 11.3434165 7.2220626 NA 10.9265734 9.0031013 2.2854318 4.8853352 9.5142434 11.5363153 10.8438455 9.2102374 15.0067643 9.9578500 8.9789118 6.6604638 1.6073422 11.9109053 7.9789118 11.6208151 12.0550560 10.2468744 10.0903624 6.4249758 11.0877917 1.2061000 2.2422000 0.0000000 -0.4160800 0.0140510 -0.4230900 -0.4512500 0.0160060 0.0160060 0.0015255 0.0015255 0.4222100 0.3450200 0.0308730 0.0102850 0.0102850 1.5477000 0.4233500 -0.4191500 0.4059400 -0.4216600 -0.4481900 -0.3978600 -0.3978600 -0.3978600 -0.3785300 -0.0167040 0.4247600 0.4314200 0.0683780 0.0133530 -0.4233500 -0.4182100 -0.4438000 -0.4230900 -0.4360900 -0.4249500 0.0160060 0.0160060 0.0155870 0.4334400 0.4312500 0.0015255 0.4071100 0.0083351 0.0083351 -0.4061700 0.0308730 0.4278600 0.0607940 -0.4350800 0.4233500 -0.4149800 -0.4149800 -0.4257100 -0.4216600 -0.4186000 -0.3882800 -0.3978600 -0.3978600 0.4132900 -0.3785300 0.4523200 0.4007700 -0.0008316 -0.4078200 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 7.9472027 11.2061498 7.1557897 7.5285987 4.7330018 10.3008399 1.2854022 8.1309149 9.5214389 8.5142434 -0.7145386 5.4948796 9.5486940 10.9662238 8.5731370 1.8703844 6.2741088 9.6451744 10.5742909 10.3447693 9.0624334 6.5238301 10.9823923 0.8704239 6.9292809 9.5094265 3.7448607 0.8704239 9.8732023 1.2854022 14.2053123 12.8244624 7.8400137 10.0749584 5.9436354 10.5380902 1.6073422 3.2854318 1.6073422 NA 9.5321654 10.2272061 5.8853376 3.3728825 8.9888267 9.6396741 10.1379543 5.6948161 9.1434057 2.4553601 9.6820295 2.2854318 3.0927825 10.3267554 5.8841461 3.2854318 7.7932196 6.7448567 4.9578496 11.9371492 14.4776790 0.8704239 10.9038102 NA 12.1853481 4.0403138 9.6506536 7.3781821 9.9424752 10.1087921 8.0798405 12.0647337 10.4377096 11.4319934 7.7032772 8.1680678 10.4598262 11.0315191 13.7386311 10.5748674 8.9184199 7.9684191 -0.7145386 7.0268919 11.5277057 10.440875 5.761158 8.684169 10.059388 8.305016 9.467732 4.677739 6.372888 10.603968 9.744856 1.607342 6.862853 7.638086 10.940061 10.133265 8.598308 10.235251 7.664803 6.227939 9.620815 9.742806 11.038224 10.820700 10.748438 8.210237 NA 8.845299 4.040314 7.450332 11.233427 4.040314 10.349494 8.020134 8.143406 15.038850 10.664803 11.671287 11.478950 10.729922 9.317471 2.455360 TCGA-BH-A0E1 52 0 NA 477 breast stage iib t2 n1 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 2 white NA 61.60.0 5 2 2 4 3 2 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 2.503025e-07 11.0014931 5.9852408 7.7320921 11.3107723 0.2482919 10.4364531 NA 9.4593535 11.6761130 8.6534180 9.8764181 7.6233160 8.7874351 8.9464022 7.2407427 8.9136123 10.3089723 9.6455945 6.5336786 2.4706670 9.1134942 9.8269636 12.7727365 11.1551670 10.1349890 10.4605701 2.1227390 11.1085797 0.6632991 1.6632991 7.8531386 12.3563651 12.5109585 8.6898373 12.2421582 12.6690261 9.6355757 7.5791930 3.7925951 6.2926713 7.9784634 10.6884534 7.2102086 13.1389206 3.5702079 12.4434435 13.5843179 6.5336786 10.1749282 10.4106677 7.0641931 6.6856823 -1.3367920 14.5520892 7.4834925 NA 7.4738851 -1.3367920 4.6175101 9.4073066 10.7138428 12.0300459 10.9423440 9.6319806 10.0192156 3.1868808 10.7695496 9.8574551 6.1790133 8.4993644 8.5626706 10.5984789 14.5662306 8.1078939 11.5179875 11.3405930 5.8824817 0.9852089 6.5581314 8.1966434 8.7307483 11.3386094 1.6632991 5.5581329 7.2557707 10.0534828 11.3827027 11.4615831 6.9716528 4.6633162 10.3589772 11.8548358 0.2482919 13.4205476 6.2557707 7.9230570 13.0333882 11.5514863 12.7656177 9.1927443 10.7494500 10.8730718 10.4898226 10.9356520 4.1551663 8.1730889 11.3154866 11.0112120 2.1227390 10.2048945 9.0318203 1.4706670 1.2482919 9.6319806 10.6912198 10.8165492 9.1521583 15.2867667 9.9987042 9.0109353 7.0684559 1.8332544 16.3587937 7.3250922 11.8855050 11.9201122 9.6926010 9.1661458 7.9807262 10.9926702 -0.00902160 1.36140000 1.36970000 0.00033257 -0.01527800 -0.01749800 -0.00816270 -0.00194010 -0.01994000 0.30194000 0.30194000 0.30377000 0.00472380 0.01349700 0.00339740 0.00501170 0.00501170 -0.02315500 -0.02315500 -0.01009500 0.00277430 0.02174300 0.02020200 0.00522040 0.00522040 0.00319080 0.00319080 -0.00094318 0.07527100 0.02020200 -0.00902160 -0.00968080 0.00777810 0.01726400 -0.01749800 -0.00816270 -0.00816270 -0.00194010 -0.01994000 -0.01994000 -0.01262300 -0.00830070 0.30194000 0.00332500 0.00332500 0.00332500 0.03101300 0.01349700 0.01349700 0.00339740 0.00000000 -0.02315500 0.00541360 0.00541360 -0.01009500 0.00277430 0.02174300 -0.74942000 0.02020200 0.00522040 0.01516800 0.00319080 -0.00094318 -0.75323000 0.01112100 0.02581100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.341 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.341 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 7.1868759 12.6071107 4.4962067 9.5858983 NA 10.1466258 0.9852089 -1.3367920 8.6994874 8.6463074 1.2482919 7.2369613 2.3637598 10.5166234 9.1062572 2.2482616 6.6633133 8.9886194 12.0138387 11.4818960 9.7795864 6.9716528 11.1888347 0.2482919 9.1000255 10.0192156 4.6633162 NA 10.4273561 1.9852454 13.3705651 12.4165306 8.8382396 10.0801113 8.6087579 9.1770415 2.4706670 2.7507780 0.2482919 6.6519988 8.9100544 11.7012040 9.4323252 3.5702079 8.0144295 7.8054208 10.4323252 5.6967367 9.8945351 0.2482919 12.4605701 1.2482919 8.5762031 9.4522198 6.3878278 1.9852454 9.0769417 7.3878278 7.3357396 NA 14.0440455 -0.3366098 10.1666428 NA 8.2687932 6.7294032 7.9716528 9.1790136 14.525472 6.240742 8.298125 12.242158 10.294946 11.770040 13.138921 12.884901 9.236014 10.437277 13.660670 10.790986 8.730748 10.090103 -1.336792 7.530593 11.816391 10.775102 5.278022 8.836991 8.831986 9.473516 9.921032 4.089574 8.449584 11.155167 4.640592 8.229368 8.634858 7.060732 10.297217 9.674541 8.502518 8.780957 12.880741 2.570196 12.030046 10.199561 11.625125 9.845087 10.723334 9.286281 NA 9.241951 9.153092 4.217905 11.382703 6.838240 10.376700 10.358977 7.029636 14.205560 10.609123 10.138034 12.718512 10.066859 9.349814 2.363760 TCGA-BH-A0E2 49 0 NA 435 breast stage iiia t2 n2a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 4 black or african american NA 61.60.0 3 1 2 3 1 4 1 3 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.668684e-07 11.3717339 6.1424870 7.9056632 11.1729710 -1.3492354 9.2365361 NA 9.7234372 10.4184053 7.5179134 9.4311746 7.0037810 8.7433918 9.4295331 6.4961252 8.4579898 10.9168356 10.4364959 7.2166886 1.4580145 9.2736017 10.5332777 13.9830210 11.1586771 9.0705949 10.7331164 5.9080227 10.5709876 1.4580145 5.9174222 8.1464898 11.6662240 13.8540821 8.5813720 11.7526104 11.9582625 8.8600882 5.9904852 1.6506267 6.3371348 8.1039051 10.5709876 7.5271517 12.7840981 -0.3494192 9.5990019 14.7398783 2.2356045 9.2223873 11.8105060 8.2430916 7.8527586 2.4579882 13.7277279 8.2836301 0.6506727 7.9949304 3.2356045 4.0081910 9.1781118 10.5575254 9.4179915 10.7190771 9.9910412 10.2162128 2.2356045 11.0021261 9.9832308 4.2944884 7.5271517 10.4426115 11.5968099 15.1000413 8.0894060 10.8500004 10.3239438 8.4038514 1.2356045 5.9267585 6.0768990 8.8330292 10.5450735 0.2356045 6.7799176 7.5209997 10.3532404 11.4179916 7.1584289 5.1100667 3.8985663 11.0873463 11.9819716 3.6048304 14.1431764 6.1504805 7.7850607 11.9053681 12.3636990 12.1721125 8.1039051 10.4422047 11.4801593 10.7117359 10.2337175 4.8003822 8.1059619 12.4145732 11.0972011 NA 10.4150917 9.0289296 -1.3492354 3.1015156 9.6113607 11.1230717 11.7376002 8.7952929 15.0915039 10.5252319 9.9663504 7.1424880 4.5575265 15.9688156 9.5279189 12.3592876 11.0876064 10.1761556 9.1008150 8.3476023 10.4795487 0.0981240 0.0577960 0.0561650 0.6810500 -0.0362650 -0.0103600 0.0363700 -0.1326400 -0.2673300 3.1931000 0.0315770 0.9397600 0.0056919 -0.0175290 0.0189100 0.0943460 -0.7641500 0.0351000 2.8216000 1.3825000 -0.0062286 0.0080567 -0.7221700 -0.7066600 0.2764700 0.0024969 0.0024969 -0.1848400 0.1185800 -0.6466800 -0.6985700 -0.6373600 -0.0030475 0.0172640 -0.0167970 -0.0259650 -0.0259650 -0.1326400 -0.2974900 0.1999900 0.0134920 -0.1321400 -0.7384500 -0.1111600 -0.0230470 -0.0230470 0.0911550 0.0012481 0.0176840 0.0189100 -0.8015700 0.0351000 -0.5179400 -0.4705600 0.6654900 -0.6907900 0.0080567 -0.6319700 -0.7447000 -0.7066600 0.0642250 0.0024969 0.0024969 0.1122800 -0.1208200 0.1478600 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.694 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.694 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 8.3717340 13.7352770 5.7591585 9.8142844 NA 10.6881817 0.6506727 0.6506727 8.5843255 7.4482964 NA 8.2564474 1.6506267 10.1989750 8.9759402 1.4580145 8.6464017 9.4229492 7.5694979 11.2214392 9.2060962 7.6364767 10.9924315 1.4580145 7.9009332 10.2162128 5.6506353 2.8205670 11.1744417 2.9725640 12.7093030 12.0043329 7.9080227 10.4704146 8.3545381 9.5109457 1.6506267 4.2355969 NA 10.1459901 9.0579024 9.7420701 10.9921536 2.7380977 8.9936316 6.7591598 10.2133542 5.7059171 9.9109663 NA 10.1268747 2.8205670 4.8003822 10.5337209 6.8823838 4.6048304 9.8041867 8.3423783 8.4740020 5.7695761 13.7009511 -0.3494192 10.5586520 0.2356045 7.6307746 5.7274495 8.2052234 10.2360668 13.9940287 6.2872599 8.7669787 11.7526104 10.9931428 10.2836299 12.7840981 13.2465332 8.3141930 10.8045033 13.0553106 11.2440258 8.8330292 8.5408991 0.2356045 7.8429273 11.4474855 11.204504 5.378557 8.670225 8.820560 7.837987 10.831809 6.323060 8.478771 11.158677 8.659063 4.174199 6.903300 6.889183 11.230893 10.260737 8.116201 9.477183 10.425010 5.392101 9.417992 10.850920 11.643927 9.649225 10.496517 9.004884 1.235605 8.706351 7.058073 5.695028 11.417992 7.305271 10.667231 11.087346 6.514821 13.457587 10.001022 9.979310 11.962809 10.592049 9.113137 1.235605 TCGA-BH-A0E6 69 0 NA 293 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white NA 56.63.0 4 4 4 NA 3 2 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 9.455874e-07 2.224912e-07 11.35256947 4.60283097 5.32865339 11.10390056 -1.09757906 8.69029172 NA 7.56060033 10.31284054 9.44251726 9.47792843 7.99778636 8.54984780 10.19528595 8.33701749 7.82720168 8.42790991 10.00960625 7.56416702 4.39423973 10.01221989 11.06792436 12.38166423 9.63200987 9.56327656 9.98719763 6.66394087 10.32076896 6.04194164 2.48735772 7.16448361 9.72017225 12.11943811 8.02651072 12.42925519 12.57393028 9.97987258 7.70005055 3.85658738 8.91081779 8.42986615 10.09283126 6.66394087 7.71617057 -1.09757906 12.58307837 11.57282417 8.18083858 10.46892375 10.00305151 8.19010171 4.90238717 1.22428729 13.64207859 8.97920481 4.03166868 7.70974416 7.80325610 6.14079297 6.73527981 9.34947232 9.60629287 8.32655532 8.34533250 9.57304537 1.70973176 10.39974212 9.55254346 2.98984746 7.65727700 4.15031596 7.72893747 14.50867874 6.94300822 10.63879111 9.99514628 10.01156692 4.15031596 6.18779150 10.20559913 8.97251001 9.69842877 0.90242094 3.80928066 7.93305620 9.79037131 11.19298409 4.03166868 5.20617043 4.32865698 7.95495702 12.12850030 3.48735772 13.60629277 3.60282504 5.50230196 10.43084328 13.88769750 12.26611331 9.15268768 11.73330048 11.77429443 10.09406541 10.14139102 2.90238235 9.05973625 11.65142057 8.71296095 -0.09757906 10.02780263 8.99250164 4.60283097 3.29470896 9.16683192 8.97116760 9.97385160 8.20388533 15.70375655 10.04257991 8.65894550 6.29470712 5.32865339 12.79426781 7.08229809 11.04545348 12.60996404 10.58976489 9.89461953 6.37812315 10.22265389 0.23654000 0.72754000 0.67511000 0.60467000 0.67196000 -0.31096000 -0.66726000 0.07239600 0.13954000 1.57490000 1.57490000 0.01195800 0.79859000 0.30553000 0.01349200 -0.31343000 0.01378100 -0.33722000 -0.00304750 0.02539000 -0.31143000 0.00073297 -0.12564000 -0.12564000 -0.12564000 0.00680440 -0.01679200 0.33108000 -0.06464300 -0.29508000 0.23654000 -0.10316000 0.00000000 -0.32126000 -0.32165000 -0.32693000 -0.32693000 0.05067700 0.13954000 0.13505000 -0.32112000 0.86951000 -0.32982000 -0.30540000 -0.30540000 -0.30540000 -0.30540000 0.30553000 0.32060000 0.01349200 0.01618600 -0.32356000 -0.00954260 -0.00954260 -0.62646000 -0.31143000 -0.31061000 -0.31471000 -0.12564000 -0.12564000 0.26483000 -0.31365000 -0.02630400 0.28786000 0.10921000 -0.31014000 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.221 -0.107 0.000 0.000 -0.314 -0.314 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 0.305 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.221 -0.107 0.000 0.000 -0.314 -0.314 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 0.305 8.8449038 12.7436587 4.4569770 9.4210423 5.7307160 13.3654665 4.5462463 2.2243182 10.3144297 8.5606007 12.1675647 8.5299232 3.2947090 11.0007503 9.3096569 5.6303094 6.2243182 9.8492955 7.1167078 10.4082008 8.4199800 4.9898520 11.8852046 NA 8.6606124 9.5730454 4.1503160 NA 11.1577129 3.7097428 14.4237749 12.9869485 8.0265107 9.6345566 8.5888896 10.7964491 4.6028310 1.7097318 NA 0.9024209 8.1020618 11.0310280 6.9247567 6.3453325 9.7637475 9.7185729 10.0323162 4.9023872 9.3338868 7.2377798 10.2355446 1.7097318 4.9898520 11.6281155 8.3052519 7.7941728 8.8419684 7.1738520 10.9136165 4.4259493 14.2479677 1.7097318 10.3699948 1.9023824 10.4939116 5.2061704 9.2989939 9.0934485 10.338580 8.917804 7.965784 12.429255 10.409688 12.089277 7.716171 10.813781 8.898156 9.477928 12.588014 10.617922 8.972510 9.188947 1.487332 7.378122 9.702480 10.600226 4.989852 9.073566 8.989852 8.206170 9.413104 6.703289 6.609749 9.632010 11.725557 8.425951 9.128801 8.252931 11.053406 9.292558 7.830167 10.100220 6.760370 8.143181 9.606293 10.045135 11.200165 10.600226 10.297388 7.155055 NA 9.295115 6.567725 9.156237 11.192984 5.844903 10.578346 7.954957 8.376095 15.282140 10.541278 10.455538 11.588890 11.864924 8.758815 3.072312 TCGA-BH-A0E7 79 0 NA 1363 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 1 white NA 56.63.0 5 5 2 NA 2 1 1 1 3 5 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 7.230962e-07 2.224912e-07 11.1870365 -1.7973629 8.7125710 11.5388842 -0.7971122 10.5151118 -1.7973629 9.9518274 11.5902749 7.4292084 9.9170416 7.5224685 8.9718074 9.2942315 7.9560131 9.0514189 9.8910464 8.9593523 6.6866112 -0.7971122 10.6311562 9.0388463 14.0500492 11.3359383 9.1051713 10.5051494 2.1096949 10.9097108 -1.7973629 -0.7971122 7.6560666 11.7055036 13.0763363 5.8610075 12.8586622 13.7790737 9.3249771 4.8321508 2.1096949 4.6457420 8.4400062 9.9631003 6.2849453 13.1697971 2.2902474 10.5440369 13.7901341 7.0638825 9.5134941 11.3943180 5.0607781 5.3525431 -0.7971122 12.5817912 8.2348419 2.3727293 7.0036956 0.2027625 4.9709825 9.9597693 10.2255106 10.4140760 11.8237032 10.1782858 9.4453748 2.3727293 11.9376115 9.6452212 6.6206480 8.4601839 9.1475082 11.5774280 14.6429028 8.2189497 12.2481291 11.2869400 8.6058080 -1.7973629 5.6540058 7.8875448 9.2471901 13.1111418 0.2027625 6.5603481 7.0854395 9.6374242 11.7239057 5.6540058 3.5603481 2.8466538 9.8119748 11.6361207 3.0101532 13.3527019 6.1453106 7.5581475 12.4949020 11.9240021 12.8613981 7.4601839 10.4468626 11.3625097 10.7795496 11.1823999 5.1335348 8.6845954 11.8483419 13.1674979 -0.7971122 10.2919155 9.4601839 0.7877668 3.2108875 10.1566287 10.1685804 10.4789205 9.5094274 14.5552706 10.6063407 11.7810508 9.0498534 3.1096949 16.2573898 8.8681321 13.5229620 11.7363692 8.1743395 9.6606900 8.1656919 9.9171832 -0.00462270 -0.00462270 -0.00484610 -0.00041585 -0.01577300 -0.00912860 -0.00664320 -0.01807800 -0.01807800 -0.82089000 2.89970000 1.56350000 0.17400000 0.16124000 0.00000000 0.00000000 0.00000000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00142280 0.02230400 0.02230400 0.02230400 0.02034300 0.02034300 0.02034300 0.01460900 0.03679400 -0.00462270 -0.00363810 -0.00698290 -0.00912860 0.00688420 -0.00664320 -0.00664320 -0.01807800 -0.01807800 -0.01807800 0.00458000 -0.00247670 -0.82089000 -0.00324850 0.01098200 0.01098200 0.01098200 0.16124000 0.16124000 0.00000000 0.00555290 0.14741000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00680440 -0.82123000 0.02230400 0.02230400 0.00217370 0.02034300 0.02034300 0.01460900 0.00263570 0.00069327 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.743 1.564 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.743 1.564 0.000 0.000 0.000 7.2279355 12.7308838 10.8681320 9.4195418 4.1821361 9.4049199 0.5247658 NA 8.0808468 7.3372223 NA 7.1498782 0.2027625 10.3699006 9.0662079 0.5247658 4.8892983 9.1757758 7.9660082 9.5843391 9.1335777 8.0069269 11.3582468 1.9032311 10.2587563 9.4453748 5.8892959 NA 10.7858788 3.4507230 12.0437706 12.1621641 7.9101552 10.8750004 7.4974168 9.2077187 3.4881936 0.2027625 0.2027625 0.7877668 9.5088578 9.7307617 10.3870515 1.7877668 6.9208840 6.1096865 10.8473283 7.7650387 9.5241605 -1.7973629 9.4771742 3.4122531 5.2580779 9.4493705 5.7897110 -0.7971122 9.5173792 7.9626844 7.0004575 1.9032311 13.5048994 -1.7973629 9.9062671 NA 8.0309325 5.9709802 7.4243830 9.1386978 13.268652 4.662228 8.975935 12.858662 10.138698 10.117181 13.169797 13.140170 9.165692 11.196088 12.220213 7.547092 9.247190 8.027755 -1.797363 7.334653 11.596991 11.001470 7.118675 8.911880 9.834428 8.252645 10.313550 5.332078 7.003696 11.335938 5.202798 -1.797363 3.846654 5.190911 10.334332 10.420754 8.984975 8.473091 13.985538 1.903231 10.414076 10.429208 12.404001 9.213324 10.599668 9.724887 NA 9.732993 6.893946 2.524716 11.723906 7.233463 10.271574 9.811975 7.342526 13.366599 10.140905 10.317189 12.768374 10.024171 10.445970 NA TCGA-BH-A0E9 53 0 NA 1405 breast stage iib t2 n1a m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 3 white NA 85.58.0 2 2 3 NA 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 5.562279e-08 10.9934697 8.9831655 7.1808460 11.3247334 3.2018063 10.8079976 1.3087104 10.0190355 11.7237083 9.0463306 10.0303086 8.1931099 9.8550644 9.0356690 8.8142492 9.6377166 10.5258133 9.4943046 7.9525770 3.2562559 10.3034786 10.0380991 11.7370813 11.3603185 9.5868387 10.7071595 5.4082567 10.7448377 1.0863082 1.9608082 8.8412162 14.1661468 12.7426046 8.2512357 13.3171997 13.1992568 9.2974058 7.7373805 5.4202297 7.6046540 8.6862414 11.1970295 9.1334526 12.8779664 3.9932215 11.2241737 13.8905269 8.3992117 8.9355252 10.8885758 8.2224655 6.9107566 -0.4985863 13.9531191 9.2017451 3.4555574 7.7277782 1.3087104 5.0559548 10.9380777 9.9027791 9.8345215 11.0076737 10.3585697 10.1957241 5.2018063 12.0988368 10.6203073 6.7821372 8.4599189 5.4321042 11.2476705 14.7727562 7.9236205 11.3638098 11.4930652 8.6421958 1.0863082 5.1452209 9.5607106 9.6007139 12.7259708 -1.4985863 3.7492983 7.2462000 9.8644058 10.8556156 6.9607978 5.9607966 4.3840083 10.0702723 11.9083683 3.0249224 12.8665267 5.9851816 8.1379907 12.1692539 13.5235606 13.0905491 8.6948917 9.9411970 11.2566710 10.9055923 11.3468562 5.4202297 7.8829089 11.7672742 11.4095711 -1.4985863 10.1874289 9.2044046 2.6712934 3.7462483 9.9234309 10.5233871 9.7757443 9.2851830 14.9569021 10.0121303 9.7710772 8.9556656 5.0405243 15.6436727 10.7214421 14.3104309 12.9696720 10.0511509 9.6631279 8.7445402 11.1361818 -0.276910 0.777720 0.777720 0.165950 0.164850 -0.264020 -0.070001 -0.062092 -0.048478 0.000000 0.000000 0.000000 0.034254 0.034254 -0.057654 -0.057654 -0.057654 -0.058058 -0.058058 -0.271880 0.140580 -0.073076 -0.118090 -0.118090 -0.118090 0.147410 0.147410 0.147410 0.156660 -0.276910 -0.276910 0.151140 -0.286910 -0.264020 -0.258660 -0.070001 -0.070001 -0.062092 -0.048478 -0.048478 0.171360 0.166870 0.000000 -0.047233 -0.047233 0.030125 0.162950 0.034254 0.034254 -0.057654 -0.057654 -0.058058 -0.058058 -0.058058 -0.271880 0.140580 -0.073076 -0.281560 -0.118090 -0.118090 0.134800 0.147410 0.147410 0.596920 0.179350 -0.055903 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 9.07595961 12.37432956 7.49571994 10.38439124 4.25759150 10.75521366 2.89369226 1.50136271 8.50839339 8.87531871 1.08630822 9.21938515 3.45555738 9.99971679 9.59742242 2.08634220 10.05978694 10.32950261 11.70700670 9.08820601 9.61130777 8.82667178 10.93364706 3.08632521 9.09755602 10.19572407 5.30872127 2.50136271 9.98769846 5.22928797 12.88588013 11.53065340 8.31994844 10.28108548 8.12707504 9.13526961 8.12341789 1.50136271 1.50136271 5.65111198 8.43358085 8.64602437 10.17113701 6.87640521 9.03873027 7.29252870 9.63771656 6.55121453 9.46209221 0.08637617 12.39902259 3.20180635 6.80970511 9.97974657 6.00200936 5.59939814 9.63707548 8.13436112 7.03274775 -1.49858633 13.75085002 0.82326023 10.21689921 NA 7.71081952 6.44973304 8.07879501 8.90117825 13.336684 5.977099 8.017066 13.317200 9.939118 11.194200 12.877966 12.404212 8.970520 11.124790 13.557877 11.013613 9.600714 9.175559 NA 7.713255 12.660449 11.466790 7.343717 8.736184 9.347640 8.308721 10.964104 6.734986 8.067420 11.360318 5.841216 5.478645 8.342144 6.609316 11.470393 10.956180 8.452651 8.104992 13.163701 5.841216 9.834521 10.448272 11.641717 10.636113 11.067420 9.412009 4.768153 9.102246 7.762967 7.420230 10.855616 5.599398 11.056638 10.070272 6.997660 13.894153 9.600714 10.299433 12.712570 10.649525 10.180846 2.823301 TCGA-BH-A0EA 72 1 993 NA breast stage iia t1c n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 85.58.0 5 2 2 NA 3 2 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.112456e-07 10.90425618 8.92960787 7.27651993 11.29998309 1.74403189 9.91752320 NA 9.74884695 11.91591619 10.82160332 9.62928521 8.29202064 9.90533646 9.94509819 7.70815895 8.79930688 10.34976864 9.12525847 7.32468731 3.84356182 10.34181111 10.92677358 12.24571960 10.85142846 9.38168440 10.32037388 4.93667091 10.60067238 1.52165383 3.46023144 8.78372707 12.61977391 12.67739907 8.43850703 13.35985123 12.65230996 10.12957887 7.88211356 4.10659121 7.62666764 8.63189804 10.48163407 8.61086207 12.67360001 1.52165383 10.53099422 15.07071486 6.98651788 9.70160762 10.35293934 10.45532280 7.11159580 -1.06340917 13.81322160 11.25775218 4.32898722 8.34181100 -0.06325843 4.02413348 9.96664705 9.91823699 10.11720049 10.71227988 9.93666959 10.15886072 7.00275877 11.47534358 10.17626816 7.03995758 8.83451498 2.10658283 10.13572852 15.03270528 8.67941711 11.53611761 11.29943540 9.27985546 2.52162870 7.37546175 9.43352348 9.02014907 11.47048602 NA 5.22207036 8.10408763 9.57872139 11.27206000 8.63537423 5.12649386 5.06595137 10.07366080 11.78196367 2.84356182 13.34983475 7.16548791 8.26085040 12.32468692 12.84524991 12.68318397 9.03601752 10.30899060 10.87293947 10.77674333 11.27707615 5.84355931 8.31821243 10.95138759 11.74100238 NA 11.04257813 8.98787848 1.25857922 3.94296484 9.92606408 11.02909649 9.73027295 9.06337405 14.98879187 10.41392194 9.21163014 8.69988195 6.02413348 14.80529931 9.55872147 13.48464860 12.57781825 10.44891633 10.06659660 8.63363718 11.27821904 -0.0693890 1.0806000 1.1011000 0.0322220 0.0287030 -0.0315530 -0.0306760 -0.0769490 -0.0641620 0.0025772 0.0025772 0.0000000 0.1423000 0.1423000 -0.0084967 -0.0084967 -0.0044895 -0.0329870 -0.0310070 -0.0135980 -0.0167620 0.0494800 -0.0420330 -0.0420330 -0.0420330 -0.0374110 -0.0374110 -0.0374110 0.0232270 -0.0693890 -0.0693890 0.0106440 0.0322220 -0.0315530 -0.0315530 -0.0306760 -0.0300520 -0.0769490 -0.0641620 -0.0770310 0.1612400 0.1612400 0.0025772 0.1691900 0.1691900 0.1691900 0.1691900 0.1423000 0.1423000 -0.0170540 -0.0044895 -0.0329870 -0.0310070 -0.0310070 -0.0135980 -0.0167620 0.0494800 -0.5519000 -0.0420330 -0.0420330 -0.0093248 -0.0374110 -0.0374110 0.0232270 0.0221050 -0.0397230 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 9.15946445 12.89811934 7.43252436 10.39456344 2.74403189 11.38013125 2.52162870 3.63711172 8.63015644 9.33648157 0.93666620 9.46421511 4.36293271 9.92108816 9.36921149 NA 9.05820310 9.33968168 10.41392194 9.77666069 9.45799518 7.23587733 12.51457047 -0.06325843 8.85851072 10.15886072 3.74402113 NA 10.79775651 9.41543926 12.83630979 11.81510378 9.24614606 10.19169823 7.31604797 8.91680921 7.17984342 NA 1.74403189 5.31171018 8.70319866 9.65776879 10.12587643 6.65776861 9.02721876 6.59488142 10.01615447 6.75684850 9.55597256 NA 11.27206000 2.74403189 4.66459092 9.74043752 6.11339213 4.25859430 9.68486256 8.54029584 7.15098913 -0.06325843 13.99288397 0.93666620 10.17268377 NA 7.84355994 8.77272002 8.35029745 9.07622103 12.41543926 3.32898004 8.55137951 13.35985123 10.18992621 10.97387341 12.67360001 12.00107560 8.98515657 10.61086189 13.53693103 10.99770325 9.02014907 8.44049547 -0.06325843 7.44446416 11.06916939 11.395845 7.316048 8.845062 8.836027 7.081328 10.768943 5.744024 6.737569 10.851428 7.150989 2.106583 9.097801 4.873306 12.594546 10.425514 8.406311 8.311709 11.566709 5.819313 10.117200 10.231865 11.407329 10.628849 10.808575 9.067240 5.106595 9.356988 7.594238 6.346060 11.272060 7.050411 10.983453 10.073661 6.936670 14.232439 9.832245 10.329524 12.980893 10.313338 9.950690 4.428524 TCGA-BH-A0EB 69 0 NA 745 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white NA 56.63.0 5 5 2 NA 2 1 1 4 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.224912e-07 11.06291109 4.88920581 7.38887490 10.89420684 0.39736489 10.45263548 0.39736489 9.99540565 11.73622873 7.58222856 9.67754383 7.22390131 8.85473408 8.77130590 7.05556444 9.38248353 9.87359299 9.94569343 7.56477141 0.98229087 9.65827255 9.58964590 13.84659848 10.84959432 9.38319494 10.62827419 6.60192378 10.65236988 NA -0.01770913 8.65238180 12.02807527 12.58794943 7.44992118 12.70248858 13.08199215 9.65001847 6.33986781 3.09779618 6.37463264 8.41555334 9.89769710 7.57726189 13.14412982 0.98229087 11.52647508 13.59045488 5.04120793 9.93165602 10.24675817 5.16553816 6.93651192 -0.60274465 15.62956713 13.45235711 0.98229087 8.80674390 -1.60252558 5.26771931 10.11374386 10.58933758 10.81441448 10.97949508 10.22469583 9.45060031 0.71931489 10.85165239 9.51434678 5.76367449 9.45399077 NA 10.93335738 14.61470500 8.50539397 11.72672902 11.30893231 9.19420380 0.98229087 2.78966666 8.05377821 8.99540565 12.49431527 1.56730206 6.51629414 7.29822024 9.38177156 11.31845017 5.78966927 6.99354304 4.78967188 11.02351839 11.74067763 2.48480840 14.06679183 6.58222781 7.65944796 12.00860849 13.22836337 12.61015343 8.60314636 10.92042491 10.96602180 10.75380507 11.06601652 4.56727772 8.71363465 11.71561345 8.73942791 -1.60252558 10.37320111 8.89520506 NA 3.25832293 9.57290255 11.26269976 10.16181011 8.94809999 15.00751284 9.95720814 9.88318243 8.51109519 2.98230913 16.00058098 8.86902837 12.73497500 11.32513104 10.13375500 9.70455385 8.61531072 10.42407704 -0.1742400 0.4616100 0.4789000 0.1512900 0.1451200 -0.1717000 0.1416200 0.1533800 0.1477300 -0.1649700 -0.1649700 -0.1813100 -0.1671400 -0.1671400 0.0000000 0.0000000 -0.0091415 0.1506900 0.1506900 0.1469700 0.0788710 -0.0993410 0.0167050 0.0167050 0.0077796 -0.1303100 -0.1303100 -0.1303100 0.0960890 -0.1484900 -0.1742400 -0.1638300 0.1451200 -0.1717000 -0.1781000 0.1416200 0.1416200 0.1533800 0.1477300 0.1589100 0.7100100 -0.5074300 -0.1649700 -0.1692900 -0.1692900 -0.1696500 -0.1545100 -0.1671400 -0.1616600 0.0000000 -0.0045695 0.1506900 0.1506900 0.1506900 0.1469700 0.0788710 -0.1009200 -0.5074900 0.0167050 0.0167050 0.1411700 -0.1303100 -0.1303100 0.0960890 0.1632500 -0.4870100 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 9.3595262 13.6182604 6.2175312 9.7723926 2.4848084 10.4082308 -0.6027447 -1.6025256 7.9615024 8.7136346 2.0977793 8.4953850 0.7193149 10.4911008 8.8392599 0.3973649 8.2615393 9.0375980 9.5822284 10.2341924 9.5465922 7.3973529 11.3973531 4.6261704 8.8319814 9.4506003 1.8567865 0.9822909 10.9289782 1.8567865 12.9149610 12.6617224 8.2254894 10.7385939 8.9719467 9.2777019 3.2553345 1.5673021 0.3973649 0.3973649 8.9297091 10.3416992 10.7091014 4.4848148 6.6577557 5.1655382 10.3853276 6.0412101 9.4085803 NA 12.3530030 4.3042409 4.1522402 9.1766210 6.3268483 6.2860957 9.9189536 7.9248303 8.0890966 -0.6027447 14.2166590 0.7193149 10.3519129 -1.6025256 8.7918157 5.1522402 8.1472227 9.2055127 13.198127 4.997265 8.433527 12.702489 10.610457 10.852680 13.144130 12.297465 9.419020 10.938692 13.253292 9.090840 8.995406 9.116742 1.397365 7.371768 11.834715 10.8436611 7.7745637 9.2095304 8.8309385 7.9384499 9.8635264 8.0412090 7.7125029 10.8495943 6.6261719 0.9822909 5.1252750 6.0127988 10.8152056 10.3515494 8.9345713 8.7971651 12.0528838 7.2799959 10.8144145 10.8275443 10.8552469 9.1770724 10.5716546 9.2006770 NA 9.9720223 7.7955838 7.2143366 11.3184502 7.9110809 10.1488971 11.0235184 7.2679955 14.0068037 10.4864724 10.8285895 12.9210375 9.6333673 9.3214233 2.2047042 TCGA-BH-A0EE 68 0 NA 943 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white NA 56.63.0 6 3 2 NA 1 5 2 6 1 2 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.640872e-06 2.503025e-07 11.700817 NA 6.821941 10.236445 -1.579060 10.844965 NA 9.824606 11.846933 10.390088 9.372346 7.435082 5.421062 10.167576 9.249991 9.286795 9.415415 10.416828 8.667802 3.880490 11.036691 10.708485 12.831711 9.858813 9.801522 10.489168 4.706464 10.663640 NA 2.590985 8.590986 10.042197 12.910282 5.215477 15.302056 10.792293 9.828329 5.266550 1.228419 3.327946 8.526970 6.668988 5.668990 12.569776 -0.578844 9.100541 10.049507 7.165895 9.746367 11.203855 8.693691 6.948538 1.880490 16.463465 10.479709 NA 6.580932 NA 1.742998 9.711656 9.646871 9.023760 10.188418 9.723700 9.481082 1.228419 11.113023 9.480406 7.300645 7.107561 1.228419 9.088173 13.802266 7.431813 9.720842 9.389728 8.496540 2.742998 NA 6.967956 8.212224 13.093155 -1.579060 7.448967 7.297578 11.068520 11.274371 3.175956 6.375258 5.339925 7.148982 12.366322 NA 14.366619 5.760910 6.595987 11.792974 12.328140 12.089281 4.375255 10.904625 11.234442 10.618892 10.957794 3.465452 8.341414 11.639170 8.446201 3.006029 10.516458 7.930836 1.006047 3.516986 9.017251 8.039447 9.468867 7.884586 15.604551 9.155771 8.550344 8.446201 -1.579060 15.208454 11.713383 13.183910 11.718407 10.312845 10.518764 8.961189 10.353619 0.40976000 0.40976000 0.55341000 -0.00052108 -0.00052108 0.00000000 0.16884000 0.00586440 -0.00049133 -0.60310000 -0.58302000 0.63577000 0.27162000 0.28711000 -0.13959000 -0.13959000 -0.13959000 -0.57977000 -0.29088000 -0.29813000 0.55784000 0.11187000 -0.59310000 3.65690000 -0.57029000 0.02023600 -0.16838000 -0.16838000 0.54334000 0.40976000 0.40976000 -0.27054000 -0.00052108 0.00683790 0.00000000 0.16884000 0.16884000 0.00586440 0.00586440 -0.00049133 0.00572540 0.00572540 -0.60310000 0.98975000 0.98975000 0.02374000 0.02374000 0.27478000 -0.60659000 -0.13959000 -0.13959000 -0.58988000 -0.29088000 -0.29088000 -1.12900000 0.55926000 0.11044000 -0.28534000 -0.59310000 -0.54590000 -0.00881940 0.02023600 -0.16838000 -0.28308000 0.38853000 -0.58134000 0.272 0.272 -0.140 -0.140 -0.590 -0.590 -0.311 0.551 0.112 0.239 -0.046 -0.570 -0.570 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 0.272 0.272 -0.140 -0.140 -0.590 -0.590 -0.311 0.551 0.112 0.239 -0.046 -0.570 -0.570 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 6.93676159 9.58910655 0.42104821 7.79392644 1.63983413 10.69922028 2.22841853 NA 8.96118920 9.46066578 NA 4.64987983 1.22841853 11.18510350 9.37453027 3.66899274 4.00601969 9.50984961 8.74973638 10.37052330 9.67778887 5.78738283 9.78355307 -1.57905954 9.72255756 9.48108174 0.00604663 -1.57905954 11.87008093 3.12149622 12.89133885 13.04311311 6.27281078 10.02746649 12.06829485 9.58785195 5.78738283 1.42104821 -0.57884404 5.54000246 8.12150088 10.24522444 10.70009140 1.59100913 9.71167919 7.66898849 9.85412503 4.76091285 11.58926327 0.00604663 9.94609261 -0.57884404 3.66899274 9.32223734 5.58827989 4.39834353 10.38395728 6.65946651 7.38395739 -0.57884404 13.82277414 -0.57884404 10.36137492 -0.57884404 7.16925459 2.94461485 8.75421676 8.92984632 8.0412813 7.8389140 9.1395941 15.3020557 9.8983136 11.6874086 12.5697762 7.9794818 9.3992497 8.9679556 12.9129770 8.5503443 8.2122240 10.5438893 0.4210482 6.2089639 11.4822637 10.86711067 4.79609933 9.55869296 8.43647628 8.11802898 9.71584276 5.87227225 4.39834353 9.85881341 11.46340467 -1.57905954 6.58093236 9.08404991 11.99849012 10.39690923 8.75756769 9.82033918 7.56826625 5.57080899 9.02376017 11.53951576 10.91166148 9.37743744 10.34215836 8.03577125 6.91691607 9.93835667 9.27369211 6.07211223 11.27437081 8.12323422 9.52762420 7.14898188 8.25407764 14.34953340 11.07748616 10.52958575 11.81552400 11.32381324 8.87124148 0.00604663 TCGA-BH-A0EI 51 0 NA 743 breast stage iia t1c n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 85.58.0 2 2 1 NA 3 2 1 1 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 8.343418e-08 11.7158964 2.8755245 7.1314310 10.7931402 1.4349351 10.7559216 -1.3725799 10.2446132 11.9989733 8.3538230 10.1898474 7.3245721 10.6272528 9.2732634 7.0538694 8.3757980 9.8248218 10.5048892 7.7124135 1.4349351 10.4793541 9.0549179 13.6470655 11.7965905 9.3297777 10.9057641 3.4349618 10.5516752 NA 1.2125693 9.3149808 11.4768146 12.9389276 8.6162897 12.6636928 12.7375173 9.0736545 6.3418506 2.7150587 7.8588265 8.7684348 9.7975301 8.1492055 12.9730103 0.2125071 10.9424715 14.8721919 2.5344850 9.1226406 10.5303570 6.7465466 9.5434845 -1.3725799 14.1880606 10.4228330 1.9495349 7.9807520 3.1511607 5.0026440 9.9467126 10.0617119 8.7190403 11.4146914 9.5487021 9.6499729 2.7975318 11.8899936 10.0643166 6.4979700 7.7824230 -1.3725799 9.7912547 14.8855453 8.3685492 11.1821939 11.8888185 8.6896511 1.2125693 NA 8.9562800 9.1687017 10.9870801 -1.3725799 6.2929418 8.1492055 10.9982924 11.3849951 6.2569616 5.2275178 4.8370602 10.8044015 12.0775275 3.5817971 13.5187242 6.6276054 7.4155077 12.3604084 13.5629543 12.6587031 8.2624162 10.2510293 11.1239595 10.9599214 11.5901396 9.4368265 8.1452744 11.4832522 12.8489656 -0.3723932 10.9865309 8.9585220 1.9495349 3.0206089 9.8932201 9.8473786 10.1677331 9.8485879 15.3417164 10.5431110 10.0369960 8.3724389 3.6276068 15.8944556 8.1194584 13.0073218 11.1896089 11.0324805 9.8025307 8.7849518 10.1190573 0.00041593 0.00041593 -0.00180140 0.00235810 0.00489070 0.01140000 0.45820000 -0.00027724 -0.57079000 3.65690000 0.01810300 0.01810300 -0.00719580 -0.00719580 0.47084000 0.40494000 0.44799000 0.00000000 0.00000000 -0.60374000 -0.00263220 -0.01354000 -0.56763000 -0.01972600 -0.01972600 -0.04007300 -0.04007300 -0.04007300 0.43058000 -0.02430500 0.00041593 0.00194180 0.00235810 0.01140000 0.01140000 0.28016000 0.01405900 -0.00027724 -0.55136000 0.00430210 -0.00415460 -0.00415460 -0.57989000 -0.01230000 -0.01230000 -0.01230000 -0.01230000 -0.00719580 -0.00719580 0.45295000 -0.56555000 0.00000000 0.00000000 0.00000000 0.00346870 -0.00263220 -0.01354000 -0.02767100 -0.56763000 -0.01972600 -0.00539920 -0.04007300 -0.04007300 0.43058000 -0.01725400 -0.04170200 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 0.119 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 0.119 9.4612858 14.3894159 12.3543554 10.1648235 3.3824874 10.7134095 -1.3725799 -1.3725799 8.2106879 9.7716260 NA 8.0864218 3.5817971 9.8820432 9.0901074 1.2125693 9.4195819 10.3044436 9.8062699 9.3966163 9.3780358 8.1134343 11.0934265 1.7975111 10.0129283 9.6499729 1.4349351 NA 10.5649788 5.1194599 12.2940510 11.9377917 8.3035620 10.8838137 8.1053633 8.9060545 5.8370577 3.0870385 -1.3725799 2.4349618 8.6105986 8.5524174 9.6617161 3.5344974 9.1536934 6.1033382 9.6034530 6.3824926 9.6889762 -1.3725799 10.4497775 3.6719953 5.2569616 9.6519621 6.3731105 0.6276068 9.2615085 7.8920479 4.7568899 0.6276068 13.9203580 -0.3723932 10.7912547 NA 8.5133012 5.5344943 9.1423190 9.5284719 15.590184 5.725638 8.417139 12.663693 10.201725 10.134904 12.973010 12.514826 9.712414 10.935944 12.816426 9.022068 9.168702 9.251486 NA 7.919926 12.499703 11.335827 7.053869 8.784952 8.681531 8.743949 10.457268 5.522423 6.827278 11.796590 7.234935 7.564243 9.461286 7.379818 12.749624 10.118456 9.691674 8.971901 12.543951 3.271456 8.719040 10.200305 10.912140 9.682888 10.473095 8.945018 1.212569 8.388208 8.029509 3.797532 11.384995 9.863619 10.135895 10.804402 7.041233 14.269149 9.779256 9.529980 12.629629 10.429313 9.617000 1.212569 TCGA-BH-A0GY 67 0 NA 923 breast stage iia t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 3 white NA 61.60.0 6 3 4 1 3 2 2 3 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.562279e-07 1.668684e-07 10.6052106 5.7211047 7.0454976 11.0197261 -0.1492806 9.6725146 -1.1491206 10.0187859 11.4364074 8.3525780 10.0387112 7.5407387 8.8882875 9.6556783 5.9902923 9.1522369 9.6572902 9.9579577 8.3224158 4.6580972 9.7478298 10.4599194 14.0886974 10.2219728 9.6709196 10.5093984 5.3899006 9.9434978 -1.1491206 5.6836319 7.9618762 11.7886661 12.8698101 10.4539033 12.2883627 12.6130188 9.6772891 3.8507394 -0.1492806 7.5053765 8.9328897 8.2770056 7.2601320 11.9230407 2.7576207 10.4520471 13.3663173 3.6056247 9.8403834 11.4880448 5.5372401 4.5231667 -1.1491206 13.1660954 10.1227871 2.4357086 7.2214276 2.9382105 3.8049415 10.1568023 10.7291748 10.1917034 11.6659238 9.8136366 9.3947390 3.6056247 11.6273793 10.5477082 4.4654521 7.2685935 5.1175288 10.1983620 14.4668012 8.1487115 11.1782933 11.2306604 8.3840705 1.1726795 0.4357353 8.2038873 10.6946617 11.1525226 NA 3.3101656 7.4837360 9.9208615 10.7542459 7.2082929 6.7333842 4.8049364 10.6333294 11.7220684 3.4357086 13.2754974 6.0601944 7.9953992 12.8834752 14.1226048 12.6891567 7.2558821 9.7954527 10.4891765 9.6766057 10.8358710 4.8280222 8.6613124 11.2165163 9.1022230 -1.1491206 10.6143680 9.5555089 2.0206622 3.2243953 8.9382034 11.2596010 10.0577550 8.9248820 15.3903236 10.1810973 10.0735355 7.3545668 2.4357086 14.2073989 7.9696818 12.7448005 11.4050896 9.8514449 8.7873786 8.5667025 9.6729051 1.0822000 0.4082100 0.4082100 -0.0086327 2.8486000 -0.0284100 -0.0077570 0.0045984 0.0045984 3.6569000 1.3958000 3.6569000 0.7246300 -0.0394490 0.3253700 0.3253700 0.3253700 0.3469000 0.3469000 0.0226940 -0.0303320 0.3506500 0.0119090 0.0119090 0.0119090 -0.4154700 0.8686200 2.8908000 2.6446000 -0.4280500 1.0822000 -0.0217030 -0.0086327 -0.0284100 -0.0284100 -0.0077570 0.0000000 0.0045984 0.0045984 0.0135750 0.7452900 0.3231100 -0.0815260 -0.4429200 -0.4429200 -0.4429200 -0.4305800 -0.0394490 -0.0394490 0.3227900 0.3253700 0.3469000 0.3469000 0.3469000 0.0277350 -0.0288200 -0.0436570 -0.4541800 0.0119090 0.0119090 -0.4287000 0.3439800 0.8927900 1.4349000 0.3447900 -0.3759900 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.428 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.428 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 8.1128356 13.9022470 8.4319413 9.4918892 3.1279799 10.1855726 2.1726795 -1.1491206 8.6580954 7.0891454 0.4357353 8.2604073 2.8507394 10.5271385 9.3385806 1.8507594 8.5354892 10.4571459 7.7149269 9.2874522 9.2270072 7.9141357 10.2942022 1.6580972 7.1816572 9.3947390 4.2082909 -1.1491206 10.2973070 2.5511715 13.1630564 12.1559474 7.7516077 10.0399474 9.9909313 9.6836307 7.4243880 2.3101656 1.1726795 9.9434978 8.0256661 9.6197519 9.6891567 4.3425903 8.2259107 6.8394255 10.5359275 5.1361422 9.3565521 -1.1491206 9.1994687 3.8049415 3.1726635 9.5089877 5.8773197 4.9382058 9.2696473 7.5820599 7.2685935 6.1636235 13.8505205 -1.1491206 10.2874522 -1.1491206 8.8150816 4.3425903 8.1905907 8.6677243 12.556371 8.005559 8.219247 12.288363 9.734148 10.375772 11.923041 11.412506 9.177271 10.823720 12.689452 11.304011 10.694662 8.638643 NA 7.159080 12.721298 10.606880 5.828020 10.475993 9.887601 8.110484 9.953976 6.397635 9.458071 10.221973 8.055312 1.435682 5.000487 7.642815 10.612707 9.954028 9.317327 9.165890 10.927890 5.959265 10.191703 10.569273 11.075044 9.636193 10.285890 9.756880 NA 8.961733 7.298940 6.382123 10.754246 7.424388 10.225237 10.633329 7.186131 14.376506 9.987732 10.164757 12.606150 11.178293 8.910085 1.658097 TCGA-BH-A0GZ 62 0 NA 328 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white NA 61.60.0 3 1 3 4 NA NA 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 8.343418e-08 12.09024189 3.69379916 7.98875682 11.25349143 -1.06099915 9.79065721 -1.06099915 9.67192349 10.72925663 8.92617203 9.84880131 7.19157351 7.72354286 9.08992472 8.67700040 9.60513223 8.68037500 10.18742878 7.50115090 0.93892559 10.00902911 9.99419063 14.14282964 9.02371666 8.73169849 10.49109689 5.43076029 10.62494904 0.52386301 2.10882551 6.97782713 10.88837012 12.52175579 9.12502233 12.63739581 13.00390348 9.23122982 7.52010869 3.79688842 8.08611287 8.03430542 8.95988808 9.11258520 13.26765320 1.26080853 10.48097272 13.30768742 4.26083864 10.63048592 10.37040581 8.26533750 5.84579863 1.26080853 13.60852296 8.76863096 -1.06099915 6.70045914 2.93890678 4.18683330 9.19511674 10.52527884 10.68079640 10.34776862 9.57008528 9.60956439 2.26083864 10.81580876 9.87701751 6.92759310 8.86816664 2.74626976 11.23582439 14.51110507 7.71997263 10.84166010 10.76227539 8.43076113 -1.06099915 4.26083864 8.48387260 8.07845933 11.00802223 -1.06099915 6.35676006 7.28320413 10.71492986 11.20217734 6.98875625 5.43076029 4.43076029 9.89673579 11.71616350 5.68037500 13.92754848 7.27429894 7.35676094 11.65250948 13.23489229 12.57247106 9.33872012 10.38857272 10.99079684 10.52340092 9.71944786 4.10883387 8.60779301 11.76585382 11.85702602 -0.06114966 10.30139994 9.03166537 1.74626976 4.22431045 8.97919795 11.51751675 9.59979553 8.62365693 15.25965584 9.90035785 10.14347926 8.35886830 3.74625901 15.97921929 8.91475615 12.54785598 11.03298586 10.23180486 9.33122555 7.70045914 10.54857168 -0.69696000 0.65381000 0.65381000 0.00578030 0.00000000 -0.69291000 0.00703190 0.00369590 0.00369590 0.25287000 0.25287000 0.26524000 -0.00655530 0.00300160 -0.00018913 1.45230000 1.98410000 -0.00337480 -0.00337480 -0.71621000 0.00092011 0.00216870 -0.00169310 -0.00169310 0.00036541 -0.00821270 -0.00821270 -0.00821270 -0.00862690 -0.68991000 -0.69696000 -0.01028300 0.00578030 0.01121000 -0.69291000 0.00092011 0.00092011 0.00369590 0.00369590 0.00369590 0.00258510 0.00258510 0.25287000 0.00272390 0.00272390 -0.71367000 -0.68518000 -0.69598000 -0.72078000 -0.00018913 -0.71170000 -0.00337480 -0.00337480 -0.00337480 -0.69073000 -0.01207500 0.00216870 0.00244630 -0.00169310 -0.00169310 -0.00641710 -0.00821270 -0.00821270 -0.00862690 -0.00060493 -0.70202000 0.000 0.000 -0.700 -0.700 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 0.000 0.000 -0.700 -0.700 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 8.56095984 13.25787457 7.02637073 10.21328628 2.42819600 11.19275564 1.26080853 -1.06099915 8.11881704 8.88142266 3.63934794 8.05525206 5.34829971 10.77535307 9.20920355 3.26083864 7.79065737 9.20100303 7.07845933 11.83977496 8.91783301 6.94453287 11.45411522 0.93892559 9.79999502 9.60956439 2.93890678 -0.06114966 11.00835796 4.18683330 12.11710615 11.77771814 8.70212038 9.97851270 7.29646016 10.39320745 6.56826473 0.93892559 0.93892559 7.58276447 9.37666025 9.47223796 9.68290103 4.06818926 8.98140203 7.88727546 10.67234728 5.78439928 9.46442894 0.93892559 11.02868966 1.26080853 7.85179775 9.72382099 6.75518803 4.10883387 9.12254357 7.12873263 7.34829882 5.49349683 13.88754916 0.93892559 11.04579822 NA 7.88142297 6.55361854 8.37769988 10.27485672 13.614534 5.881422 8.170129 12.637396 9.378739 11.482665 13.267653 11.697756 8.412614 10.173127 13.002388 8.682060 8.078459 9.444720 -1.060999 7.485803 11.546701 11.258016 7.031665 8.779686 8.542534 8.430761 9.754836 5.508765 7.394235 9.023717 8.692125 1.746270 4.553619 8.114233 10.363074 9.874810 8.073335 9.150797 9.059146 4.365175 10.680796 10.610449 10.829932 9.494456 10.749881 7.589960 3.796888 8.636328 7.280093 5.224310 11.202177 8.499241 10.513923 9.896736 6.215032 13.360841 10.044817 10.090559 12.190539 10.462960 9.378739 2.938907 TCGA-BH-A0H0 69 0 NA 461 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 3 1 5 2 NA NA 1 1 3 1 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 11.0356049 6.4282747 6.8308600 12.7915334 -0.8937857 10.6484111 2.2762584 9.8227373 12.7984171 12.2590275 10.2970972 8.1035260 10.1059943 9.2737646 6.6988033 8.3315539 11.1207158 9.2063519 6.2043794 1.2762584 11.1114447 10.7320554 14.6142186 7.2017436 8.9257274 10.6997377 5.0011627 10.3905865 -1.8937857 1.8067777 7.0950309 11.1821599 12.0008801 4.9007606 12.9403731 14.2907377 9.6743026 5.9828636 2.2762584 7.0950309 8.5146762 9.6012021 4.3157981 13.1612476 NA 9.6657237 14.1966658 7.9565336 8.8421058 11.1722675 8.3339626 9.4271471 NA 12.7809703 10.4049820 3.3917540 10.0957410 NA 4.5657799 9.9356729 11.2236650 9.0192360 11.4239005 9.7529053 9.8452832 1.4282496 11.5054909 10.9954702 6.6493783 7.1884959 1.5657921 11.2088144 14.8664037 6.5311428 11.2436580 10.3378677 9.3713755 -1.8937857 5.3824701 5.5981984 9.2643251 9.2725097 NA 3.8342662 7.3986685 11.2902920 10.6183462 7.8085196 4.7645585 3.0605490 9.8765975 12.1385645 3.4986594 13.8774233 5.4372644 7.3566448 11.8438052 7.1589146 13.2165036 8.2096342 10.6642889 11.1678865 11.2715708 11.5717854 5.4372644 8.1991035 11.9971808 12.7404202 NA 9.9108810 10.3351652 1.9136841 3.3983914 10.1831622 10.0169893 9.6036994 8.8015748 15.0449269 10.6029507 11.4428531 8.9392366 1.9136841 15.3038608 5.2662168 12.5056245 13.1561526 10.4069851 9.3900137 8.8761845 11.2553728 -0.0249530 1.4316000 1.4316000 -0.0084385 -0.0084385 -0.0048461 0.0000000 0.0026357 -0.8590000 -0.8395400 1.4680000 1.4574000 0.0120970 0.0120970 0.0122080 -0.8384900 -0.8384900 0.0037465 0.0037465 -0.8429100 0.0143300 -0.8374400 -0.8217100 0.0266540 0.0266540 0.7879400 0.7794500 0.7867800 0.0238470 0.0043863 -0.0202750 -0.0137040 -0.0084385 -0.0048461 -0.0048461 0.0000000 0.0000000 0.0026357 -0.8590000 -0.8590000 0.0012481 -0.0013687 -0.8395400 0.0081959 0.0081959 0.0081959 0.0081959 0.0120970 0.0120970 0.0141900 -0.8476700 0.0037465 0.0037465 0.0037465 -0.8429100 0.0143300 0.0232860 -0.8249700 -0.8217100 0.0266540 0.0237060 -0.7957800 0.7867800 0.0238470 0.0168450 0.0472680 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 7.6338235 9.4835570 5.0488596 9.2148711 3.5326162 9.8321389 NA -1.8937857 9.0532528 6.3206652 NA 6.6141415 2.6913108 10.2740783 10.2010840 4.6609343 7.6279468 9.4428531 8.0444559 10.6247539 10.1139276 9.3115290 9.8184437 2.1063483 9.8380898 9.8452832 2.4282764 NA 10.4911303 2.8612408 11.9182229 11.9264258 6.9137020 9.3145810 6.6220460 10.0359748 5.1831609 -0.3086445 -1.8937857 4.6141385 8.2998720 9.0087216 11.7400230 4.8877056 5.6992518 7.0778903 10.0296740 6.8545393 10.1175738 NA 10.5868843 0.4282496 4.5981984 9.5939102 4.9550942 3.2356352 7.7357029 7.9874607 6.8712178 -0.3086445 13.4931521 0.4282496 9.8414794 -1.8937857 8.5585879 4.5492872 7.6299088 6.3824701 11.565394 6.025210 8.782304 12.940373 9.616121 10.872875 13.161248 11.580686 8.241607 10.714139 12.688018 11.175796 9.264325 9.273765 5.095030 7.532612 12.296943 10.726108 8.343557 8.748398 8.965881 9.743424 10.341948 5.614141 7.948697 7.201744 4.964329 -1.893786 8.034124 8.268990 8.022226 8.394059 7.238203 8.770794 12.618964 4.976712 9.019236 10.526043 11.556913 9.688959 10.984781 8.930510 NA 8.951546 5.070282 4.900761 10.618346 2.964325 10.559103 9.876598 8.638702 13.286528 10.278149 9.929316 11.470481 9.531562 10.427429 1.565792 TCGA-BH-A0H3 46 0 NA 1149 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 3 1 2 4 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 2.781139e-08 11.06993687 9.27207919 7.22928413 10.81837750 1.17555654 10.83478357 -0.63173452 10.39402896 12.04437472 8.97552759 9.82301066 7.86205272 9.10628942 9.51730916 5.90735699 9.45366964 9.82609114 9.78393901 8.06516460 3.27508156 9.95269000 10.02238571 12.80900155 11.39472066 9.67026499 10.71110527 5.79446266 10.91701912 0.69010416 4.04062069 8.91798185 12.73082603 13.17242912 8.15119569 12.96427050 12.76426680 9.43764701 6.88389692 4.43428794 7.12642055 8.93900173 10.93258498 8.63381225 12.65864815 2.53811597 9.81786177 14.23928429 5.53812218 9.56109411 10.48486608 7.22306531 5.06863642 -1.63173452 13.30736366 11.31528624 3.53812839 7.48713821 0.95315347 5.37942342 10.26452963 10.41190815 10.27846526 11.36007336 10.31619938 9.69406479 1.53814081 11.77586333 9.90055318 5.76907614 8.88389722 3.57764635 11.16241002 14.94116387 8.72458309 10.50037564 11.75944083 9.55183263 1.69010416 4.17554855 9.34976444 9.40574416 11.74771098 -0.04677202 5.23856142 7.16909722 10.01880023 11.04899629 7.35119102 6.44501319 5.61612535 10.38570162 12.01801475 0.36815371 13.48616494 5.36819563 7.83987269 12.78545643 12.29930408 13.03014231 8.15283190 10.23160917 11.24720604 10.95849421 11.52680692 5.63498235 8.18837620 12.89396273 12.25656000 -1.63173452 10.25274939 9.32384718 -0.04677202 3.58077261 10.38744042 11.19036973 10.54312290 9.20345813 14.79172355 10.10671172 9.89665134 8.21682005 3.79445746 15.45084529 8.70135256 13.13715690 12.84942907 10.01610529 9.76800927 8.67083609 10.53575652 -0.00622860 0.87787000 0.87787000 0.00013863 0.00013863 -0.00041585 0.00847430 0.00110930 0.00110930 0.03834700 0.03834700 0.03622900 -0.00216260 -0.00216260 0.00000000 0.00000000 0.00000000 0.00124810 0.00124810 0.01586600 0.00137150 0.00235810 -0.00857660 -0.00857660 -0.00857660 -0.00512270 -0.00512270 -0.00843850 -0.00193990 0.00791750 -0.00622860 -0.00110870 0.00013863 -0.00041585 -0.00041585 -0.00489490 -0.00489490 0.00110930 0.00110930 0.00110930 0.01233700 0.01684500 0.04741000 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00216260 0.00346870 0.00000000 0.00000000 0.00124810 0.00124810 0.00124810 0.01586600 0.00346870 -0.00443120 -0.48323000 -0.00857660 -0.00857660 0.04244900 -0.00512270 -0.00843850 -0.00193990 -0.00055444 0.00180300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.26906401 13.40655900 8.18837620 10.04503581 3.67161041 10.22072681 1.17555654 0.36815371 8.46885942 9.29003821 -0.63173452 8.58988106 2.82763614 10.05425998 9.11555117 0.95315347 10.51953100 9.64257541 10.25960122 9.07037001 9.49980344 8.06168441 11.21994630 4.09611845 9.16342527 9.69406479 4.84392859 NA 10.54405865 3.36819563 13.08844150 12.13275788 9.09100476 10.26036057 7.92086612 8.82865316 3.53812839 1.36820960 0.69010416 5.81113960 8.39056494 9.21133325 10.08330127 5.75190285 5.95188149 4.81114217 10.46820247 6.25694082 9.72189553 NA 10.98083540 2.69012652 4.98290690 9.77456174 6.37427095 4.47671867 9.26225720 8.63615440 6.35119014 NA 13.94509488 1.69010416 9.93852737 -0.04677202 8.74432258 6.37382219 8.03353313 8.72244656 13.0915313 3.9227877 8.5654140 12.9642705 9.8645517 10.7688099 12.6586482 12.2333505 9.4979438 11.1249621 13.4541261 11.3440452 9.4057442 6.8759913 -0.6317345 7.3223933 11.6405354 11.447015 7.790262 9.366788 9.075556 8.300412 10.464145 6.333982 6.592198 11.394721 5.577649 4.827631 6.662818 5.076662 12.943205 10.642867 8.807717 7.977376 12.536478 6.445013 10.278465 10.370309 11.368902 9.724099 10.690125 9.401620 1.690104 9.347858 7.446455 6.298935 11.048996 8.511580 10.786804 10.385702 7.674259 14.447828 10.116390 10.603314 13.116495 10.099516 9.985665 1.175557 TCGA-BH-A0H5 45 0 NA 1080 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 7 2 2 NA 2 2 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 5.562279e-08 11.2754257 7.8544626 6.8754225 11.4189497 1.3973649 10.6075243 1.7599654 9.5723004 12.0491953 9.4534318 9.5029092 8.4572988 8.4572988 9.2266446 7.4818035 10.1740428 9.9198162 10.0888690 8.3025471 5.6234426 10.3668641 9.4197426 12.2569096 11.1325682 9.8503514 10.6913390 9.4518822 10.2835069 NA 0.1750455 10.1570253 11.4009931 12.4362938 7.1598754 12.5975728 12.2018516 9.5295990 6.6721693 4.6123879 6.6880516 9.0718192 9.1945732 6.4355103 12.0405868 2.0494565 11.4400113 12.8035798 4.8379483 9.8651434 10.0798678 7.7244463 7.8188384 0.5900510 15.9496921 12.4102956 3.2904539 8.6695048 -1.4100448 6.4908862 9.9688565 10.0094534 9.9688565 11.5012246 10.0943423 10.3331712 4.0494478 10.9563421 10.3175149 6.6344147 8.4969105 10.6075243 10.6473347 14.8722939 8.7072473 11.4147798 10.9417873 10.7122008 2.1749816 4.1446093 8.9063014 9.0848753 12.2500158 NA 3.7193039 6.8474082 10.4684540 11.0394265 10.3787382 8.7167245 5.4355086 10.5730135 11.8742656 NA 13.5382959 5.5325352 7.3941505 11.7239648 11.0049693 12.7821585 7.7115534 10.1768597 10.7752051 10.5187381 10.9809949 4.3179408 8.7884648 12.2283427 11.4151775 NA 10.5066458 9.2001220 2.6774857 3.3978851 9.9437182 10.9293132 10.2557999 9.1194503 15.1977547 10.1316005 9.9999411 7.2374786 3.4969097 15.2776826 8.9453710 13.2032914 14.0115917 10.2952202 9.5014119 8.1917906 10.2903643 0.06494000 0.06494000 0.06494000 0.00166420 0.00166420 0.00000000 -0.00325910 0.00027728 -0.00151890 0.00124810 0.00124810 -0.00345690 -0.00027724 0.00485790 0.01447000 0.01447000 0.01447000 -0.00310010 -0.00069303 -0.00756930 0.00013863 0.00471900 0.00291330 0.00291330 0.00291330 0.00555290 0.00137370 0.00137370 -0.00318590 0.06494000 0.06494000 -0.00110870 0.00166420 0.00000000 0.00000000 -0.00325910 -0.00325910 0.00027728 -0.00151890 -0.00231620 -0.00459610 0.00027728 0.00124810 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00485790 0.00485790 0.01447000 0.01447000 -0.00310010 -0.00069303 -0.00069303 -0.00290910 0.00013863 0.00471900 -0.10366000 0.00291330 0.00291330 0.00041593 0.00555290 0.00137370 -0.00318590 -0.01409000 -0.04034500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.3807757 11.8690500 7.6206868 9.3860595 7.9735728 10.1388419 7.2120712 -0.4100448 8.7933679 8.1731024 NA 7.5386794 3.1135838 10.3175149 9.4549799 1.1749816 10.6524034 8.8972208 11.2395006 9.8556349 9.6049331 7.4386430 10.1754520 3.5442133 8.1484405 10.3331712 5.6453010 NA 11.0705576 3.2904539 13.5255993 12.3155992 7.9844828 10.2861181 9.6827771 9.2001220 5.6344132 2.2904539 -1.4100448 4.9650593 8.9715628 9.8266321 10.0591529 5.9909004 7.8530307 6.2120712 10.6189619 5.6561102 9.4268593 0.1750455 10.8585619 5.8661439 3.5442133 9.4011458 5.9023582 9.5857871 10.1479622 10.0025897 11.1086730 NA 13.9414423 2.3973649 10.3819967 NA 8.8994962 4.9119456 7.5900196 8.7823126 12.0035592 5.6880516 8.6708375 12.5975728 10.7590053 10.5140901 12.0405868 11.5336336 9.3432366 10.9170111 13.4821358 11.0725758 9.0848753 7.9431665 -0.4100448 7.4480006 10.9091274 11.018118 6.324730 9.106695 8.430798 8.157976 10.066022 9.889800 8.660141 11.132568 6.907433 4.290461 7.290459 7.945657 10.783853 11.492583 9.766193 8.276520 11.583489 9.612388 9.968857 11.013136 10.600898 9.909692 10.679801 8.951964 NA 10.208896 7.975882 10.776753 11.039427 5.698544 10.899496 10.573013 7.457360 14.180926 10.237928 10.867307 12.983410 10.920937 9.490132 4.496910 TCGA-BH-A0H6 82 0 NA 747 breast stage i t1b nx m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 1 5 2 2 3 2 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 10.6801078 4.1240882 7.2638814 11.4722025 -1.3022262 9.6204116 -0.3022262 9.6263455 11.4240454 11.7814727 9.6836691 6.7905844 8.5712714 9.2466492 7.2790273 8.0965707 10.2567262 9.6241232 6.9266459 NA 10.8796006 9.8715044 13.3377896 11.2634054 9.1251401 10.0399019 4.0553779 10.0157937 -0.3022262 3.5558039 7.8348180 11.4094941 12.0629193 6.7201950 12.5177069 13.0951007 10.1679777 5.9552151 2.9457575 8.3452855 8.6808208 9.8845605 8.1490383 13.0129768 2.0197731 11.1608406 12.8690040 6.3125363 9.9661295 11.4997376 7.9716229 2.7852994 NA 13.1699646 10.9160998 1.8677384 9.1886781 -1.3022262 4.6520218 9.3497757 10.1876752 9.8392958 11.8643041 10.0191916 10.1881767 -0.3022262 11.2137734 9.9332432 6.9692898 7.7692897 9.6418072 11.6699095 15.0097351 7.4939963 11.6639721 10.7786447 9.8633624 -0.3022262 2.3982683 7.6865117 8.9820729 11.3753266 NA 7.0332170 7.1896803 9.9710400 11.2085914 5.7312511 4.7639161 4.4257480 9.8570678 11.4740546 0.6978628 13.3120194 5.3416834 7.5148111 13.3734535 13.6718384 12.8180651 8.0016080 10.4397155 11.5429252 10.9888972 10.6957124 3.9072849 8.6850911 11.5253684 13.0740883 -0.3022262 10.2184459 10.1866715 -0.3022262 3.2213822 9.5781760 10.7524315 10.9078897 8.6935943 15.2768484 10.3751063 11.1651780 8.1428423 4.0197553 16.1250254 8.8639902 13.4495282 12.7934715 9.6017090 9.5409632 7.8037359 9.6653921 0.0077478 0.0077478 -0.0053038 0.0132130 -0.0202210 -0.0183180 -0.0128510 -0.0095426 -0.0095426 2.0940000 3.2514000 3.2261000 0.0077783 0.0077783 -0.0065917 -0.0018014 -0.0018014 0.0070826 -0.0013076 -0.0156180 0.0098669 0.0418830 0.0387710 0.0387710 0.0387710 0.0520990 0.0520990 0.0520990 0.0291840 0.0077478 0.0077478 0.0543760 -0.0056041 0.0190830 -0.0209120 -0.0128510 -0.0128510 -0.0095426 -0.0095426 -0.0095426 0.0084743 0.0000000 -0.8131000 0.0019418 0.0019418 0.0019418 0.0019418 0.0077783 0.0077783 0.0459910 -0.0018014 0.0070826 -0.0013076 -0.0013076 -0.0110600 0.0098669 0.0168450 -0.8026000 0.0387710 0.0387710 0.7717600 0.0520990 0.0520990 0.0083351 0.0055529 0.0475520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.438 3.251 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.438 3.251 0.000 0.000 0.000 7.8876520 13.8068824 10.8674391 9.8174168 2.9735745 10.2615001 -0.3022262 NA 8.1796265 8.1552078 0.2827363 7.9312073 2.1572701 10.3715779 9.2958798 -0.3022262 7.1029688 9.1459436 10.4099242 10.5892312 9.1002105 7.0197553 11.0755800 2.1572701 10.4397155 10.1881767 7.7719687 NA 10.4754935 3.4527140 12.3861868 11.9745332 8.1114550 10.3000620 7.7852903 9.3658257 2.9457575 1.0197731 -1.3022262 2.0197731 8.8450321 9.4914304 10.1735606 4.4257480 8.5709945 7.7476761 10.6736751 7.1449101 9.5011511 NA 9.6366717 3.3982683 4.0553779 9.2153884 5.1242578 0.2827363 9.3271839 8.4560504 5.1572580 0.2827363 13.7201517 1.2827956 10.0203187 -1.3022262 8.2865421 4.8475761 8.2695798 8.6879313 13.6856255 5.0016086 8.8938145 12.5177069 10.1990922 10.3618300 13.0129768 12.0839591 9.0597709 10.4535494 12.6914733 10.1098677 8.9820729 9.1500684 0.2827363 7.4460204 12.0172171 11.013260 7.763916 9.209580 9.057577 7.811569 10.406424 6.046554 4.742222 11.263405 6.634465 1.019773 6.452714 5.885674 11.869160 10.579324 8.972788 9.034334 11.799311 3.157254 9.839296 10.282790 12.045033 10.156234 10.180131 9.150068 NA 9.585551 6.906647 4.124088 11.208591 8.601709 10.287010 9.857068 7.260070 13.363496 10.168486 10.174067 12.390661 10.839934 9.778645 2.019773 TCGA-BH-A0H7 65 0 NA 702 breast stage iiia t1c n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 6 white NA 61.60.0 3 3 1 3 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.00121e-06 3.059253e-07 12.5282322 5.5120246 7.3355985 11.8656480 0.9780492 9.2924410 0.7150147 9.9234905 11.6556194 8.5120250 9.9058246 7.2541707 8.3501860 9.4798837 6.2132637 9.4285706 9.2346484 9.7907587 6.8277123 2.2999773 8.8799192 9.9752261 14.5302754 10.9028591 8.9742847 11.0510723 5.3472794 11.1107605 -0.6069133 2.4805495 8.0133037 11.1250394 11.4118059 7.7702945 12.3539005 13.4186995 9.7843276 2.2004416 -0.6069133 6.6598703 7.6854055 8.3930841 8.4871619 11.9111224 0.9780492 9.8844361 12.7648607 3.6410142 9.3650300 11.7104967 8.0637402 7.1711608 1.8525183 15.0588742 9.4140641 3.0369428 6.7811013 -0.6069133 3.6784889 9.2220138 10.1919608 7.6267034 11.4861714 9.0943905 9.9234905 2.7150147 10.5149413 9.6668796 6.9048369 8.5705035 0.9780492 9.8035354 14.7092065 8.0474157 11.1732137 10.8801704 7.9438311 1.7150147 6.1210050 7.7746270 8.9254399 11.6745795 -1.6069133 5.8360276 6.8109366 9.2734329 11.1746487 5.4043105 4.9476708 5.2634476 10.0637403 11.5936762 2.8525183 13.7300787 4.3703666 6.7854015 12.5444178 14.5397323 12.7201454 9.0342328 11.0907033 10.6767513 10.0034538 10.8008829 4.0935264 8.4698998 11.7045486 9.3341316 -0.6069133 10.0396428 10.2841083 0.9780492 2.2669064 8.9048366 10.1064706 9.4320031 9.3289856 15.7469029 9.8753878 11.2180428 6.2999754 3.0935264 16.0438694 7.2541707 12.3437311 10.6980057 10.2672970 9.7002849 8.3559800 10.5466614 -0.133400 0.656630 0.716030 -0.590390 0.254330 1.092300 0.125450 0.285800 -0.601380 1.067800 0.269700 3.306400 0.296600 -0.141680 0.288500 0.290240 0.302980 -0.110900 0.689430 -0.207210 -0.120450 -0.447710 0.377300 0.377300 0.126530 -0.536220 0.305940 0.281050 2.791600 -0.107230 -0.133400 0.715840 -1.292900 0.272530 0.048120 0.336740 0.429570 0.285800 -0.599250 -0.601380 0.615340 -0.033814 -1.292900 -0.578220 -0.588040 -0.146350 -0.074144 -0.141680 -0.141680 0.557080 -0.504630 -0.132670 0.680670 1.202500 -0.157840 -0.127630 -0.454790 0.305530 -0.423440 1.223700 -0.504840 -0.548950 -0.537330 1.070600 -0.248250 0.351370 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.143 -0.143 0.000 0.254 -0.138 -0.138 0.337 0.337 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.143 -0.143 0.000 0.254 -0.138 -0.138 0.337 0.337 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 9.31863861 14.42835570 7.59030110 10.22478710 2.85251827 10.63357725 1.39308666 -0.60691334 8.77137887 10.22280673 1.20044158 8.12127655 2.39308666 10.74843515 8.90483660 0.39308666 7.32382129 9.90631821 8.32086191 10.04503267 8.95309205 6.40431050 10.73321230 0.71501475 7.77246238 9.92349047 2.39308666 -1.60691334 10.18098660 1.39308666 12.32916983 12.51267368 8.64693162 9.76649297 9.46989961 9.67037140 6.53774179 -1.60691334 -0.02195084 2.91664861 8.20365584 9.38460591 10.15878449 3.91664861 8.89246146 6.29395162 10.20566253 6.48584058 9.83187597 NA 9.32308201 4.29997725 3.88493975 9.64963486 5.08461708 3.43748077 9.49505973 7.90681185 6.19398458 4.83602510 13.74488600 0.97804916 11.25630241 NA 8.31789645 3.88493975 8.43200314 9.62730278 13.7799166 6.5927560 9.1056110 12.3539005 9.5810546 10.6971501 11.9111224 11.7183895 8.5642608 10.4378197 12.5343929 9.9092766 8.9254399 9.4996470 -0.6069133 6.9008789 12.5287132 11.1953985 6.9399788 8.4778926 10.0247158 8.2969657 10.1348333 5.6968646 9.5345527 10.9028591 7.6314885 6.5680093 4.5630117 8.6686383 11.4541176 9.9028591 8.2698467 10.1504741 12.9082295 4.6598732 7.6267034 10.5866094 10.3639089 9.3319284 10.4749003 9.3319284 NA 9.0371205 6.8102619 5.3588674 11.1746487 8.7767883 10.3097100 10.0637403 7.3149249 13.5700753 10.6513556 10.2969659 12.5816729 9.7811013 9.4851805 0.3930867 TCGA-BH-A0H9 69 0 NA 1247 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 6 3 4 1 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 1.946798e-07 12.1404801 7.0070688 6.4968745 11.5522032 -0.3549440 9.6202561 1.8150425 10.0163569 11.5027170 8.0859939 9.1409798 7.0797525 9.2478236 8.3865915 6.9715539 9.6137915 10.0460042 10.7569124 6.7897827 2.8930515 9.2300872 9.3412228 14.8438575 10.3899586 9.4668987 11.0231486 5.0026755 10.5953015 -1.3547595 0.6451483 7.7246093 11.5313929 11.9377340 9.2035455 12.7076769 12.4596071 8.4232021 7.5934920 4.5031070 5.6224033 8.5154893 7.7219406 6.2961766 12.9003009 -0.3549440 9.9019231 13.7154134 4.4524768 9.6712746 10.4851158 8.9523254 6.1127293 NA 12.6000335 8.6854146 2.2300800 7.1409800 NA 2.8930515 9.8930523 10.8324768 10.1429766 10.3696386 10.3373043 9.6137915 1.4524900 11.2496780 10.1198447 5.5031070 7.5729025 3.2889786 11.5828663 14.8112290 8.2958355 11.4399467 11.7797115 7.4000119 2.8150425 5.1997155 8.2961766 9.1852528 11.4211464 NA 4.2300877 7.2671762 9.3840615 10.6380631 7.1127304 4.8150476 4.0374437 10.9874773 11.7593551 4.9670533 13.9195757 6.2300877 5.9938532 11.1409798 11.4839347 12.5235589 8.5876391 10.9614063 10.7145745 10.2482874 10.6563520 4.8739411 9.8642933 11.5095043 9.5201061 1.4524900 10.1529193 8.8484727 -0.3549440 1.8166407 9.2898824 10.9546011 10.0004758 9.7431568 14.6920782 9.8212979 10.0390515 7.2524554 0.9670210 15.7485970 8.9771614 12.8952011 10.9927461 10.2468955 8.7352372 7.9580074 10.6299739 -0.33837000 0.63353000 0.66202000 0.00263570 0.00263570 0.01703300 0.00819590 0.00402430 -0.35670000 -0.01409000 -0.01409000 3.65690000 3.65690000 -0.33583000 0.00000000 0.00000000 0.00000000 0.00097064 1.88040000 -0.04319500 0.02454800 -0.34171000 -0.00788630 -0.00788630 -0.01253800 -0.02630400 -0.02630400 -0.02630400 3.65690000 -0.35476000 -0.33837000 -0.11495000 0.00263570 0.01703300 0.02090300 0.00446310 0.01070300 0.00402430 0.00402430 -0.00415460 0.00680440 0.00680440 -0.01491600 -0.34205000 -0.34205000 -0.34205000 -0.34205000 -0.33583000 -0.33583000 0.00000000 0.00000000 0.00097064 -0.34527000 -0.34527000 -0.04319500 0.00342760 -0.34171000 0.34305000 -0.00788630 -0.00788630 -0.35305000 -0.02630400 -0.02630400 0.28675000 0.00110930 -0.37034000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.343 0.343 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.343 0.343 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 7.802472 12.669312 5.490615 9.345564 3.429629 11.295952 -0.354944 NA 8.612351 7.092208 -1.354759 7.832477 2.452490 10.617387 9.044937 2.345567 7.689519 8.907220 8.441164 10.563988 10.202804 7.650749 10.098395 2.967058 9.655653 9.613791 3.400019 5.667492 10.493748 1.815043 12.675447 11.968602 7.281749 10.419912 5.993853 9.849696 5.921248 -1.354759 -0.354944 6.310460 9.208321 9.428942 10.287176 5.373046 6.131678 7.844797 10.670610 5.948904 9.739202 -0.354944 11.206890 1.967058 2.645125 10.031354 6.653329 1.967058 9.617387 7.132964 7.807516 0.230080 13.208619 -0.354944 11.496093 NA 7.911911 4.288979 8.265345 8.114767 12.4203235 6.7897827 8.3542084 12.7076769 9.7556080 11.0026767 12.9003009 12.3276805 9.3983414 10.6259784 13.0543168 10.8181772 9.1852528 9.6281183 0.6451483 7.0026766 12.8554917 10.8401893 7.8075159 9.1499437 8.3386116 8.8847234 10.3953502 5.3175501 8.7125590 10.3899586 5.1208579 1.9670579 7.6080204 8.4413104 9.9078069 9.5038828 9.2726587 9.4605081 11.8292252 4.2889786 10.1429766 9.9982715 11.1946688 9.5810264 10.2612140 10.1871892 5.3316264 9.6197186 5.7070084 3.8150528 10.6380631 6.0629765 10.0261268 10.9874773 7.1086489 13.5895165 10.1934650 10.5493830 12.6190911 10.9771613 9.0059717 0.6451483 TCGA-BH-A0HA 31 0 NA 1611 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 5 2 2 2 2 4 1 1 3 1 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 2 0 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 4 6 5.481066e-06 1.665134e-06 11.5686487 5.8918104 6.2405376 11.7085938 -0.1081142 9.9224772 -1.1081142 9.3705797 11.4082488 8.5120301 9.3906593 7.5957140 8.2114824 9.2137383 8.4348421 9.1491979 10.0654872 10.4333908 7.6265194 3.9362045 10.1415162 10.0159314 14.4682649 10.6628869 9.2515596 10.8184767 7.3553344 9.8046994 1.6991518 2.6991740 8.2001492 11.5473408 12.6454447 8.1978718 12.7969150 13.3624054 10.3316410 6.5922492 0.4767446 6.9141782 8.3675436 10.1973019 8.5535882 12.8744472 1.2950765 11.2179587 14.1600231 4.5642379 9.6706593 10.4866013 6.8748031 8.8705207 1.4767964 15.6629236 12.9942132 0.4767446 8.2603165 NA 4.8225466 9.0172235 9.8151376 9.2744341 10.4050442 7.7956923 9.6862260 4.0210888 10.4430377 9.5642354 6.5922492 8.0185146 4.4767705 10.5892121 14.5733505 5.9512078 10.9736264 10.5455509 8.7896556 1.8918080 6.9086184 6.8401774 8.3756260 10.9491250 -0.1081142 6.4309693 6.9578995 9.5211668 11.2817103 6.3512414 6.1206298 4.5356673 10.5129462 11.5965783 0.4767446 13.1076464 6.7119890 6.9950978 12.1340911 13.6627837 12.3567387 8.8401774 10.6290575 11.1450667 10.1806763 10.7059920 3.3512467 8.7835938 11.6355927 9.7552221 1.4767964 10.5124881 8.6566816 0.4767446 3.6991629 8.5320551 10.3538011 9.7239090 8.5571462 15.8511669 9.9692934 9.5686487 7.7896556 3.0617416 14.2097173 9.3916560 12.2134564 11.6957394 8.2711885 10.1176201 7.5818084 9.6943830 0.0090312 0.0090312 0.0090312 -0.6713100 0.0111210 0.0075000 -0.1110400 0.0041632 -0.6712200 0.0069435 0.0069435 0.0069435 -0.1131200 -0.1131200 -0.1137700 -0.1043400 -0.1043400 0.0102000 0.0181030 0.0070826 0.0061090 -0.0128510 -0.6659600 0.0335490 0.0335490 -0.0024938 -0.0024938 -0.0024938 0.0000000 -0.0036537 0.0090312 -0.1073600 -0.6713100 0.0075000 0.0075000 -0.1025000 -0.7598600 0.0041632 -0.6712200 -0.6712200 0.0090312 0.0090312 0.0069435 -0.1400000 -0.1400000 -0.1400000 -0.1400000 -0.1131200 -0.1131200 -0.1137700 -0.1098300 0.0102000 0.0181030 0.0181030 0.0070826 0.0061090 -0.0128510 0.0076392 -0.6659600 0.0335490 -0.1081100 -0.0024938 -0.0024938 0.0000000 0.0029133 -0.1082800 -0.113 -0.113 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 -0.654 -0.654 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 -0.113 -0.113 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 -0.654 -0.654 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 9.1829807 14.3741139 7.3306023 10.2510106 3.5855755 11.2185205 3.5922537 NA 8.5101957 8.9169498 -1.1081142 8.1230314 2.0617416 10.6000318 9.1049143 2.7986934 8.6315907 9.1748985 7.2046934 11.6237655 9.8370126 6.9686253 11.6195179 0.4767446 8.6927100 9.6862260 4.5922477 NA 10.8619160 2.3512326 13.8108131 12.9304719 9.1503761 10.1597672 10.6599945 9.6690654 2.7986934 1.4767964 1.2137516 5.1206298 9.0754455 11.4734815 9.9937857 5.7246994 7.6502002 7.6991650 9.9964089 5.2137400 9.2980151 NA 11.1143032 1.8918080 5.1585956 9.7708725 6.6511651 4.1397396 9.5756820 8.7055913 9.8143945 NA 14.2630423 1.4767964 11.4914906 -1.1081142 7.9950978 6.1772122 8.1230314 9.2148648 13.0305819 6.1397376 8.6780797 12.7969150 10.6854135 10.3624690 12.8744472 12.0928619 8.6180283 10.2143016 12.6882554 9.8995382 8.3756260 9.1121885 0.4767446 7.1158115 10.8221779 11.2934896 5.1397396 9.0988246 9.3614519 7.5571458 10.1220648 7.3956361 9.6805285 10.6628869 8.1444757 5.1397396 6.3916560 6.5651539 11.0088038 10.3096627 7.6197307 10.2349958 9.4701828 6.2841273 9.2744341 11.4611911 10.5320551 9.5129462 10.4678220 8.2646753 0.4767446 9.6539347 7.0508739 6.3916560 11.2817103 7.8748037 11.1603521 10.5129462 7.2493619 14.1029379 11.2419205 10.2792890 12.1398859 10.8872240 8.8532600 2.2137516 TCGA-BH-A0HB 55 0 NA 806 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 3 1 5 2 NA NA 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.39057e-07 11.8203591 3.7937919 5.4593693 11.6095577 NA 8.5796633 -1.0643140 9.1231589 11.9078892 7.1403779 9.3849555 6.6569068 8.1955504 9.8138578 7.6637274 8.9102215 10.1513399 10.1299482 6.4593693 7.7367070 10.0605745 9.5468318 14.5164777 10.8717086 8.3557673 10.9091455 7.6738991 9.9322805 2.2577348 3.0232731 7.4475594 9.9365112 12.8363200 6.7559865 12.4969755 13.2573828 9.5633408 6.8900028 3.7937919 6.7039908 8.0804653 9.3756379 6.9414315 13.4911750 -0.5282403 10.4623062 13.8168253 2.1057451 9.2765250 11.3462583 7.6637274 9.3494349 2.1057451 14.3612861 10.4386387 0.5207491 8.5886521 3.5207742 3.4593660 9.0059279 10.1144718 9.8471989 10.1640243 8.9414315 9.5170075 2.3952274 10.7718573 10.0560448 4.3620701 6.7237101 -1.0643140 11.6757985 14.2062118 6.8537163 10.3813392 11.2212092 8.5486755 0.5207491 7.4236471 7.5651638 8.4256548 10.1831411 -1.0643140 5.4115415 7.7431622 10.1144718 10.8746514 6.9965029 5.8061719 4.5796629 9.4730254 12.1869934 5.3281256 13.8449500 4.2212120 7.2977508 11.4301625 12.4480536 12.6323399 9.0059279 9.3249004 11.4112870 10.4769035 10.8997867 3.6362418 8.8030856 11.4140710 12.0901504 3.8426973 10.0099484 9.4932706 0.9358369 2.5219804 8.6205556 10.3205907 9.2966540 8.9992021 15.3303199 10.1513399 10.1088593 7.0018957 1.9357992 15.5603454 9.3641671 11.5277967 11.1069837 9.8291084 9.7781573 7.7844300 9.8809435 0.02398700 0.02398700 -0.66809000 0.00249690 -0.01807800 -0.00097017 0.00666530 -0.01684100 -0.63906000 0.58973000 0.84731000 1.51030000 0.05039200 0.00308000 0.69746000 0.06036500 -0.65678000 -0.63083000 0.01950300 -0.64217000 0.04925600 -0.06168900 -0.65957000 -0.52940000 3.65690000 0.06847900 0.03327600 0.03327600 0.59332000 0.04103400 0.02398700 -0.00456950 0.00249690 0.02525000 0.01768400 0.00666530 0.01922300 -0.69133000 -0.64565000 -1.29290000 -0.01766600 0.46314000 -0.47173000 -0.00857660 -0.00857660 -0.00857660 -0.02267600 0.00308000 0.50186000 -0.58215000 -0.65678000 -0.63083000 0.01950300 0.01000600 -0.64217000 0.02707600 -0.11587000 -0.20622000 -0.65957000 -0.52940000 0.67085000 0.02174400 0.03327600 -0.65389000 0.02454800 -0.63301000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.118 1.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.118 1.506 0.000 0.000 0.000 8.73508853 12.10885938 7.26672377 8.64316606 3.88999913 10.66032077 1.52074910 NA 8.84570017 8.07791376 NA 6.88417418 3.18374057 11.02260660 9.19907625 2.52077424 8.07535827 9.08935884 9.62405720 11.02658098 8.74290425 6.71059432 10.10948410 -0.06416313 6.85467019 9.51700753 4.32812557 NA 10.39164787 1.52074910 12.78442988 12.59947623 7.51323569 9.59044296 8.53199662 10.33455062 4.06508972 2.63624178 NA 3.18374057 8.85467019 10.55923119 10.88271320 3.57966290 8.25380731 7.52826421 10.05669285 6.05474865 9.64747390 -1.06431396 10.67432143 3.18374057 2.74317025 9.81734921 6.82916965 4.95817452 8.73670667 8.39933134 9.88782012 7.02326977 14.02844021 -0.06416313 11.02260660 0.93583687 8.49422758 4.18373263 8.45936891 8.23272311 13.588682 5.991089 8.451507 12.496976 9.541286 9.763943 13.491175 12.458388 8.421636 9.515123 12.540708 10.435155 8.425655 8.556027 2.395227 9.040406 11.165827 10.890730 6.878322 9.609116 9.433659 7.115716 10.426943 6.913087 8.275657 10.871709 7.486553 3.183741 5.622307 8.270170 9.713062 10.199076 9.243008 9.467188 9.495184 6.154976 9.847199 10.934397 7.684000 9.556943 10.385471 8.164625 3.395241 8.456465 6.799993 6.239587 10.874651 5.755985 10.257171 9.473025 7.159809 13.824836 10.967853 9.935807 11.265603 10.973697 9.058635 1.257735 TCGA-BH-A0HF 77 0 NA 727 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white NA 61.60.0 5 2 NA 2 NA NA 3 3 3 3 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 4 0 1.546314e-05 7.481265e-06 11.8606868 6.9940049 7.4390995 11.2751169 2.7460762 9.4830424 1.1611137 9.4128334 11.8356598 9.5027443 9.2790171 7.5396257 7.8781055 9.6641450 8.0535056 9.0474206 10.5261245 10.2185647 7.5186665 4.0091142 9.8726093 10.8314165 14.2176505 10.8092922 9.1857001 10.7176204 5.8049699 10.6421065 2.6465313 2.9266447 8.4685430 12.1189419 12.1396818 7.7400533 12.4317601 12.7180993 10.2685930 4.8391887 2.5396303 6.3937748 8.3568556 9.7610272 7.7520755 12.6357329 0.8391534 11.1320831 13.2241723 6.1879142 9.8483990 10.2748565 8.1879142 7.2357912 NA 14.2791622 9.8643258 3.7460762 8.0607732 6.0091120 3.7460762 9.3754335 10.4428126 9.6823222 11.2769384 9.4080924 10.3113694 2.6465313 11.0707075 9.8808454 5.5256868 8.3529139 5.9266494 10.9349130 14.9835856 7.3085429 10.8285808 10.9545551 8.8753599 0.8391534 6.6205454 6.8890354 8.7948363 11.9439488 2.0090963 6.3230025 7.1012813 9.4372388 11.2096012 7.9863910 5.6593652 5.6971678 9.9946370 11.6742498 -0.1608466 13.7074783 6.0486394 7.6846764 12.2562476 13.3485902 12.4801090 7.7787658 10.5700809 10.9914711 10.5346104 10.9675029 3.5940708 8.8998822 11.8586033 10.0619812 1.4241696 10.3573477 8.9838444 2.7460762 1.6486035 9.6465413 10.6193159 9.3430120 8.9965331 15.2115072 10.0320955 9.1452479 7.8670921 3.4241428 16.0943809 8.7743512 12.5777008 11.7533845 9.8566907 10.0541125 8.1790362 9.9870272 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8532066 13.6446783 4.9052739 9.7662234 2.9668180 11.0924429 0.8391534 1.4241696 8.8849459 8.8587771 1.4241696 7.9371396 3.8391836 10.4789792 9.0835501 2.7460762 9.0559320 9.0535054 9.7286903 10.4339774 9.4825916 7.1923333 11.3940149 2.0090963 9.2196472 10.3113694 4.6720745 2.0090963 10.5226196 3.5396303 13.0332506 12.4697947 8.9052754 10.3189665 8.3802827 9.6057153 4.1611137 3.1611137 -1.1606853 5.9052763 8.3469808 10.3235057 10.5974095 5.4241495 7.5277163 6.4390995 10.3573477 5.7580499 10.0781880 1.1611137 11.9748956 3.9266447 4.2315015 9.8449722 6.0170043 5.6336027 9.4538961 8.3310392 8.5448188 8.3250158 13.8840073 -0.1608466 10.9911542 -1.1606853 8.1565989 6.6971678 7.9079644 8.6689091 13.613253 5.179037 8.344998 12.431760 9.575588 10.554290 12.635733 12.051075 8.914666 10.499628 13.010910 10.233113 8.794836 8.891754 NA 7.766964 10.743445 11.292971 6.963308 9.284201 8.590730 7.630349 10.127124 6.424149 7.891755 10.809292 7.889035 4.672075 6.346982 7.396458 11.124588 9.793383 7.536710 8.846213 11.825206 6.323003 9.682322 10.278498 11.070107 9.965891 10.602399 8.969757 2.161114 8.599124 8.212051 6.775824 11.209601 7.976177 10.557291 9.994637 6.916002 14.239198 10.634008 10.682322 12.368129 9.963954 8.990203 2.424143 TCGA-BH-A0HI 78 0 NA 620 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white NA 72.63.0 5 5 2 2 NA NA 1 4 3 1 NA NA 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 8.343418e-08 10.8312202 3.6621257 7.1360611 11.0342699 -0.5077879 10.0415087 -1.5079930 8.9444465 11.9141387 9.2931054 9.6163266 6.7914130 8.6758406 8.6482885 8.0827925 8.9900571 10.7240266 9.6052963 6.9598107 NA 9.4162754 9.9547076 13.3962284 11.4462199 9.3258860 10.4540168 4.6007277 10.3419896 1.0771746 -1.5079930 7.6189096 12.1038066 12.1605364 7.4808903 12.8944180 12.8046629 10.0463145 6.8930843 3.5796629 5.4229427 7.8585275 9.6820298 7.1105908 13.5263595 0.4922121 11.1170008 13.8410372 6.7868263 9.9753611 10.6137389 6.1504175 7.3839893 -1.5079930 14.4508034 11.4120594 1.8141402 7.2963363 -0.5077879 5.0620613 9.7537127 10.1765156 10.8783373 10.9260515 10.0318488 9.7902678 5.3123856 11.0724639 9.6795575 6.9434162 8.5131852 -0.5077879 11.3911846 14.8490871 7.9253734 11.5809936 10.9278756 8.8197579 1.2995377 4.2470920 7.4723448 8.7077384 12.3995655 1.4922121 6.5743544 7.3091889 8.6176188 11.1301887 5.6918775 5.3123856 4.3748517 10.7451664 11.5372824 1.0771746 13.5318955 6.3809493 7.6137386 11.7804947 12.8360850 12.6822615 8.3610279 10.3043827 10.6661947 10.2797366 10.5945092 4.3501860 8.6783195 11.9751393 9.9699636 NA 10.2890561 8.8541490 -1.5079930 1.6621143 9.4744859 10.7419114 9.9885599 8.7625006 14.8273340 9.7430958 9.4572682 8.1105908 2.1926361 17.0148520 10.4207238 13.0340280 12.1686032 10.0029695 9.5556005 8.2554176 10.6422509 -0.01243800 0.75586000 0.76230000 0.10877000 0.10877000 -0.10697000 0.00166420 -0.00719580 -0.00719580 0.00180300 0.00180300 0.00180300 -0.00705760 -0.00705760 -0.00519070 -0.00519070 -0.00519070 0.00750000 0.00422870 0.00013863 0.11521000 0.09449100 -0.02288100 -0.02288100 -0.02288100 -0.01739100 -0.01739100 -0.01739100 0.11111000 -0.01243800 -0.01243800 -0.00526100 0.10877000 -0.10697000 -0.10697000 0.00166420 -0.78752000 -0.00719580 -0.00719580 -0.00719580 0.14043000 0.10745000 0.00180300 -0.00553750 -0.00553750 -0.00553750 -0.00553750 -0.00705760 -0.00705760 -0.00392700 0.00124810 0.00750000 0.00422870 0.00422870 0.00013863 0.11521000 0.09449100 -0.66689000 -0.02288100 -0.02288100 -0.10972000 -0.01739100 -0.01739100 0.11111000 -0.01092200 -0.02013800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 8.2184237 13.3908068 4.6621314 9.6072489 0.8567865 10.7077384 1.8141402 -1.5079930 8.2636950 8.7077384 -0.5077879 7.2374088 0.8140992 10.4325189 9.2620432 1.2995377 6.0620613 9.2898670 11.9247473 10.9320362 9.9757642 7.3687221 11.8841202 3.7776091 8.9890592 9.7902678 4.1360601 NA 10.4129304 1.8141402 12.9954721 12.6303171 8.8118775 10.3139793 8.1179142 9.3091889 3.7776091 1.4922121 NA 4.2735681 8.8320555 10.4812449 11.0352372 3.4921993 8.1215439 6.4922057 10.4358191 6.6520763 9.5420539 -1.5079930 12.7144720 3.8141300 5.9598119 9.2024177 6.6120797 1.0771746 9.2562476 7.1142577 7.4140467 1.4922121 13.9257908 0.4922121 10.1032301 NA 8.6470234 6.5366000 7.6646329 9.2328293 13.480388 3.884520 8.689422 12.894418 10.278475 11.063010 13.526359 12.286621 9.355548 10.511101 13.317512 10.186128 8.707738 8.791413 -1.507993 7.555601 11.524251 10.9623558 7.2302972 9.0809201 8.8508566 8.2252378 10.2432012 6.7162076 8.6072489 11.4462199 6.4110686 3.2995670 4.1360601 5.9494229 10.3560045 9.9485598 8.1378636 8.8585275 12.4672472 3.1926518 10.8783373 10.6336740 10.8890777 10.0501477 10.5977866 9.2260680 NA 9.4893637 8.1984077 3.7016599 11.1301887 7.7089514 10.5214926 10.7451664 6.8759090 13.6737071 10.5259724 10.7882612 13.2230469 10.2821465 8.7971271 -0.5077879 TCGA-BH-A0HK 81 0 NA 178 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white NA 61.60.0 8 2 2 3 2 2 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.116108e-06 7.631864e-07 10.6449010 9.1280882 7.7724875 10.8913036 2.2454348 9.8136122 NA 9.6396696 11.9780836 10.2195409 10.1020434 8.2825343 10.1178634 9.6117672 6.5912201 9.0909352 10.1702575 9.8000339 7.4286667 4.2048059 9.8748016 10.8038657 13.0332569 12.1540044 9.4242482 10.4209253 5.0978889 10.3346747 1.0755326 1.3974744 9.2239966 11.6127384 12.8970947 7.6107953 13.0428363 13.7787747 8.5793457 4.8828729 1.0755326 6.0755198 8.2252672 9.6243418 5.8304075 13.0011672 NA 12.4741301 14.4789648 7.7514771 9.2360343 9.8820697 9.6567205 4.8828729 NA 13.2262907 8.7602685 1.3974744 7.4242478 4.3609191 5.7897658 9.2009334 10.7341778 8.9913994 10.4153701 9.9596905 10.4527305 0.6604723 11.0036682 10.3352633 5.8699355 8.6809994 2.2454348 11.9080145 14.5017848 7.2548321 11.2096254 11.1732230 9.0585135 2.0755326 -0.9243989 6.8102297 9.0062573 11.3884029 NA 2.2454348 7.1362160 10.1695977 11.2211338 6.8304075 4.7193751 3.7759566 10.7602686 12.6238603 3.2454500 13.5985306 3.3974470 7.6828507 11.5613493 11.7891213 12.6798416 6.9147236 10.0224262 11.0209638 10.6224338 11.1623197 4.3234493 8.2922659 12.0576223 12.4451174 NA 9.8756110 8.9052429 2.6604723 2.9881757 9.6049505 10.3912356 10.3417210 8.6698446 14.5835314 10.3528074 9.1801188 8.6377624 3.3234421 14.5303976 10.8178295 12.7420769 12.0504723 10.1368912 9.7381884 8.2653445 10.7888034 1.39710000 1.88930000 1.92860000 -0.00097017 -0.01798700 0.00036127 0.04349900 -0.01188700 -0.01188700 -0.77922000 -0.01133500 0.01042400 0.00819590 0.00819590 0.01084200 2.08150000 0.01321300 0.01614600 -0.00794220 -0.00659850 0.02567100 0.01914300 0.00374650 0.00374650 0.00374650 0.00624810 0.00624810 0.00624810 0.03059100 0.01148300 -0.01505400 -0.01329600 -0.00097017 0.00036127 0.00430210 0.00674280 0.00674280 -0.01188700 -0.01188700 -0.01316100 -0.00774820 0.01516800 -0.76903000 0.01098200 0.01098200 0.01098200 0.01098200 0.00819590 0.04174100 0.01084200 -0.76523000 -0.01422900 -0.00794220 -0.00794220 -0.00659850 0.02567100 0.01391800 -0.74985000 -0.75685000 0.00374650 -0.01546600 0.00364690 0.00624810 0.03059100 0.00666530 0.03552400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 0.000 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 0.000 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 8.26287191 11.74130004 2.53495803 10.12468794 3.32344213 11.05065147 1.88287777 0.66047231 8.84204889 6.83040746 NA 8.40327454 5.11991223 9.90365654 9.37014074 0.07546417 10.77769266 9.42645913 11.18502425 9.66235987 9.70131097 6.95203647 11.48914791 2.07553263 8.89888733 10.45273050 4.93350182 NA 10.35860835 3.77595655 13.58498576 12.16049444 8.30193237 10.90959597 8.17618213 9.43636717 1.07553263 0.07546417 -0.92439892 2.24543481 8.19705349 10.09788781 12.40096603 7.02388739 7.39771827 6.48491149 9.79062398 6.51846275 9.75147711 0.07546417 12.51405199 3.16298339 4.28497305 9.92412736 7.44712208 7.18404419 9.11031887 9.63585286 8.85195294 7.26039551 14.83220662 1.39747442 9.96350216 NA 7.95510353 6.63010837 8.13351164 9.22145227 14.563390 4.908409 8.257914 13.042836 10.659543 11.434446 13.001167 12.441842 8.856880 10.433622 13.415787 12.285430 9.006257 5.675432 NA 7.318694 11.197701 10.755880 4.690227 8.553278 8.270277 7.927269 10.191864 5.945884 6.162983 12.154004 7.489148 2.534958 7.029717 6.238516 10.544144 10.406437 8.297107 7.800034 10.477466 5.970338 8.991399 10.767700 10.699402 10.202870 10.828737 8.828737 NA 8.205782 7.496785 7.472125 11.221134 5.323446 10.881776 10.760269 6.796620 15.073978 10.324041 10.931946 11.848247 10.314522 9.568375 3.719381 TCGA-BH-A0HL 56 0 NA 72 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 2 white NA 56.63.0 NA NA NA NA 2 4 1 1 3 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.668684e-07 12.2716852 0.2639959 7.2752716 11.7586503 NA 10.5006569 NA 10.5491578 12.0146470 7.9851440 9.7841722 7.8109392 8.4563376 9.1873721 7.5448153 7.3803883 10.4624897 9.8709124 7.0937672 3.5494474 10.9171137 8.9347008 14.2741793 11.6615856 8.5893500 10.8782944 -0.1510416 10.0778258 -1.7360041 -0.7360041 5.7638896 11.4465942 13.1434843 8.7638906 13.0237768 13.2086652 9.4716691 7.1558281 3.9079001 5.3408613 8.0905931 7.0421223 7.5994353 12.9933467 5.1709345 7.6412548 13.7736341 4.6038933 9.6092004 10.6442351 7.3461937 5.5678253 -0.1510416 13.7276910 6.2413254 -0.7360041 7.0322287 -1.7360041 4.2640409 10.1216370 9.3233892 10.2562749 8.3959017 10.1060021 9.6850575 2.8489984 10.9761417 10.5462643 7.3355074 7.3084392 1.0714195 9.8732234 14.8734110 9.0927524 11.9628578 11.3733856 6.1344099 0.5860201 2.6563591 9.5000589 8.8490072 8.9355856 -1.7360041 5.1709345 6.8676704 11.3348365 10.6826879 7.2182406 -0.7360041 3.7234712 9.6044511 11.7556473 5.4734980 12.9738824 6.2124118 7.7131933 11.8912365 9.7673736 12.6088260 8.5678253 10.8558007 10.3826613 10.8480676 11.6776726 5.5586656 8.7214256 11.9313780 12.9776996 -0.1510416 10.1313234 8.9557882 -1.7360041 6.6084293 9.7245006 9.9249320 10.4624897 10.3548187 14.3565128 10.5896312 9.0021368 7.0905931 7.1799240 16.1189678 4.1947805 10.9013487 9.7563985 10.3959016 9.9355857 8.6499071 10.3036115 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.7558984 11.1966285 3.6563591 10.4003950 2.4936217 11.1061985 -0.1510416 NA 8.5575162 6.3725691 3.4735012 5.9856234 1.2640560 10.1417122 9.1701837 4.9364683 4.9505431 9.5226108 11.2507756 10.5480011 10.2841530 8.0969349 10.9921777 0.5860201 10.6055635 9.6850575 -1.7360041 1.0714195 11.0445844 3.8186359 11.1724373 12.0336759 7.2036240 10.9072244 8.1724375 9.6887358 7.2724730 2.0713851 -0.1510416 1.2640560 9.1413288 10.1851418 9.3172919 1.2640560 9.9365496 7.0810285 10.3534951 4.7069891 9.4458181 -1.7360041 9.3521704 3.1709345 4.8787548 9.4608558 6.6023351 -1.7360041 8.3647068 7.0355337 8.5471328 NA 12.9432498 -0.7360041 10.9983308 NA 7.6038948 7.5859728 7.9133005 9.1776821 15.552961 6.922256 8.536675 13.023777 10.403276 10.668122 12.993347 13.567076 11.776105 10.749371 12.067268 10.471974 8.849007 8.517892 3.018937 7.173938 12.321106 10.9993891 8.9808642 8.1079656 9.7316501 9.3640499 10.5494295 3.6215948 10.2058259 11.6615856 6.9293803 0.2639959 8.2124118 8.5510530 9.6050074 10.1126676 6.4389698 9.8667436 9.8138293 -0.1510416 10.2562749 9.3314791 12.0251803 9.1527878 10.5746574 8.2413244 -0.7360041 8.5825989 4.7069891 0.2639959 10.6826879 9.3627348 12.1998755 9.6044511 7.0685633 13.3008622 10.2156936 9.1940427 12.2396240 10.1157937 9.9718351 NA TCGA-BH-A0HN 67 0 NA 516 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white NA 72.63.0 NA NA NA 2 3 2 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.112456e-07 11.41742708 0.96930708 6.74409784 12.44466425 -0.03061924 10.24368895 0.55424502 8.27764960 11.23228649 10.98681521 9.59501965 7.33999783 9.25702312 7.52389985 8.44098582 8.75558030 10.66671284 8.69382459 5.62752221 -1.03061924 11.80022206 10.14921986 13.08109853 10.70613552 8.44301646 9.55896191 2.55426958 10.04144342 NA 2.29124991 5.17876244 6.88220039 12.77414767 2.42873200 13.52563722 12.59775634 7.82417912 7.96931054 4.69722893 5.07783688 7.64879113 10.72336316 4.77666727 13.55585741 1.77665148 12.42155203 14.23056098 3.92351052 10.20950588 11.07390958 9.10245290 9.39347712 0.96930708 15.11562529 9.12159568 2.87619276 7.48894715 NA 1.77665148 9.80220081 8.82417912 9.60502886 9.89782912 9.25471308 9.65756105 3.96930708 10.99652567 10.76128760 7.18362943 7.87920399 13.74172847 10.90852270 13.89375219 6.01370567 10.44200160 10.22964235 7.07259891 2.77667253 -1.03061924 6.93509549 7.68698718 9.14548386 NA 5.11905731 7.74409784 8.72419834 10.24834092 2.13924027 4.29124254 3.42874540 9.86942281 11.82729181 5.19812872 13.28813602 9.09084443 7.90004804 10.73044645 11.83156068 12.16852302 9.46716269 9.79585930 10.51427526 10.32137627 10.33344543 4.25471497 8.81323190 12.60932972 11.54106345 NA 10.75925189 8.62573551 -0.03061924 4.25508524 9.15542493 10.42823003 9.06338861 8.65581119 14.66752711 10.11141779 8.93220678 9.51137533 -0.03061924 15.23523711 8.57108176 12.36885577 11.69829415 10.65054917 9.29123886 8.56922372 10.98889802 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.95230444 11.60819918 2.42873200 9.25124072 NA 10.61856693 -1.03061924 NA 8.91913744 8.87319277 NA 4.52390064 1.29124991 9.95444120 9.80299158 3.55426958 3.36162801 9.29123886 12.88649636 12.02916221 9.00951822 7.73086205 9.04211324 2.87619276 9.72085490 9.65756105 4.13923208 NA 10.58998880 2.77667253 12.60706774 11.93689731 5.41225312 8.93653695 8.46516599 10.29067529 2.55426958 NA 0.55424502 7.54295833 9.68784367 11.07946778 10.60366807 -0.03061924 10.44737256 8.38293868 10.10437873 5.30916163 8.81949767 NA 11.74697708 NA 3.29123518 10.16377834 6.74791368 NA 8.10116785 5.62752221 4.75067081 -1.03061924 13.61389942 NA 10.91731292 NA 7.63108900 4.87620259 8.27992346 9.81636819 13.05633765 5.17876244 8.71246234 13.52563722 9.80615019 11.32052614 13.55585741 11.22787684 8.11231126 9.38293868 12.76788384 8.71918036 7.68698718 8.43079040 -0.03061924 7.23140553 10.15851767 11.27992358 6.08825186 8.23375340 9.03270588 7.03000715 10.39392850 6.99167829 7.64526790 10.70613552 6.71077751 3.87620259 10.03203153 7.18944704 7.22669829 10.62573569 7.78629446 9.33781722 7.68011756 2.42873200 9.60502886 11.00822978 10.91219177 8.85042471 10.70147819 6.66279795 NA 9.60942920 3.87620259 -0.03061924 10.24834092 2.87619276 11.51427521 9.86942281 6.04612650 13.75404787 9.85271785 10.03741723 11.63797420 10.41536024 10.13672894 -0.03061924 TCGA-BH-A0HO 48 0 NA 76 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white NA 56.63.0 5 5 2 NA NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 11.3700204 6.6935817 7.1778819 11.5530569 -0.2371835 10.4580725 1.1778540 9.7750031 11.6135520 8.5550922 9.6930888 8.3994689 9.2660074 8.9526687 6.8783219 9.6171932 10.1324416 9.3750983 6.7999330 0.1778540 9.7136431 9.8564819 12.0839268 11.5888630 9.8748492 10.2640179 4.6697355 10.8794005 -0.2371835 -0.8221460 8.0265046 12.9033545 13.2941445 6.5442041 12.5499305 12.4335742 9.2379021 7.3148732 5.5177324 4.0847701 7.9006893 10.3386986 5.7852131 13.2861611 1.7628590 12.2731963 13.6396169 4.6208268 9.8445007 10.5216226 6.3824528 6.7665965 NA 15.7508236 11.8051215 1.4998331 7.9460658 NA 4.9460664 9.4788062 10.5675130 11.2977955 11.3548340 9.8735450 9.6290928 0.1778540 11.2441391 9.7467879 6.4018830 9.1284375 1.4998331 10.3599656 14.6058983 8.2789117 11.8552710 11.4143444 8.7267035 0.7628165 7.6896346 7.7571980 8.3909858 11.4763739 -0.8221460 5.6856767 7.6856767 8.6444681 11.2979575 10.7955787 6.7439363 5.1891090 10.9075025 11.5641484 -1.8221460 13.8048740 6.6166738 7.6062416 12.0669103 11.0445811 12.6567145 8.5409215 10.6247066 10.6439582 10.6120590 11.0362513 4.6697355 8.5121550 11.8049596 11.0317760 -1.8221460 10.2974714 9.0536311 3.2222791 1.5026870 10.1490660 10.5640137 10.3630669 9.1608753 15.0086940 10.5819588 9.6088569 7.7382146 2.4998076 16.0933935 5.0358614 12.8327974 11.1828044 9.5550922 9.0076045 7.8938439 10.3656483 0.00110930 0.62428000 0.63865000 -0.00401620 -0.00401620 -0.01326400 0.00694350 -0.00925970 -0.01491600 0.00180300 0.00180300 -0.00055444 0.00597000 0.00597000 0.00000000 0.00000000 0.00000000 -0.00526100 -0.00526100 -0.00415460 0.00332990 0.01209700 0.00597000 0.00597000 0.00597000 0.00264650 0.00541390 0.00541390 0.01419000 0.00110930 0.00110930 -0.00774820 -0.00401620 0.00194180 -0.00762070 -0.00475630 -0.00475630 -0.00925970 -0.02069400 -0.00553750 -0.00512270 0.00291330 0.00180300 0.00750000 0.00750000 0.00750000 0.00750000 0.00597000 0.00597000 0.00000000 0.00000000 -0.00526100 -0.00235530 -0.00235530 -0.00981850 0.00332990 0.01487200 -0.67417000 0.00597000 0.00597000 0.00694350 0.00264650 0.00541390 0.01419000 -0.00180140 0.01223700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1722350 12.0114637 1.6373320 9.1835064 3.3071662 10.1505026 0.9852089 -1.8221460 8.4388014 7.7534207 -1.8221460 6.7379476 0.9852089 10.5403735 8.8599984 NA 7.5978418 9.6197884 10.9976617 11.6366728 10.2741983 7.6434478 10.8509699 5.3377539 9.0028403 9.6290928 8.1436659 NA 10.6822041 2.1778859 13.1402355 12.6941358 7.8661322 10.5474790 10.1971249 9.3615170 -0.8221460 0.7628165 -1.8221460 2.0847786 9.0795029 11.6749851 10.4115015 2.7628378 6.3726387 6.6935817 10.3078086 5.3276299 9.7353455 NA 12.5069773 2.5701957 9.8049596 9.5858876 7.0034133 0.4997821 9.3352287 7.9836258 9.6046705 -0.8221460 14.0785127 1.8783330 10.2078591 NA 8.5110371 5.8360933 7.6187511 9.4180767 13.894917 4.604148 9.098235 12.549931 10.186923 11.240097 13.286161 13.411127 9.284739 10.511037 13.070709 11.302003 8.390986 9.714129 -1.822146 7.078749 10.576893 10.5354337 6.1262481 8.5321311 8.4896300 8.4560525 9.6303598 7.3553009 7.0666253 11.5888630 4.4066999 6.8396598 7.3071644 6.3203980 9.7939710 9.7180098 9.1465341 9.0028403 13.1709970 4.2439737 11.2977955 10.5946793 11.1889342 9.1988617 10.6280620 9.2877124 -1.8221460 9.9553343 9.4106744 3.5701957 11.2979575 7.4470088 10.3116661 10.9075025 7.1639797 14.5624790 10.8713687 10.3710990 12.7939136 9.2147422 9.4621274 -0.2371835 TCGA-BH-A0HP 65 0 NA 414 breast stage iiia t3 n2a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 8 white NA 72.63.0 5 2 2 4 3 2 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.793278e-06 1.734514e-06 11.22265304 7.26534500 8.11099218 11.08600423 1.36446037 9.96066750 -1.63531552 9.91666652 11.77466407 7.53940312 9.60705636 8.14091104 8.86830340 8.66711651 8.01013643 9.46514006 10.45822542 9.89097694 7.25322064 1.17184731 9.69315273 10.29632330 10.22750247 11.35776999 9.15401149 10.38406848 6.05796574 9.77227663 -1.63531552 1.53441028 8.41160166 12.50458856 13.21695850 7.78233058 12.59352185 13.25360142 9.51104635 8.12270119 5.76535705 7.00110189 8.42246934 11.16213928 8.40065149 13.15889362 0.68643329 10.84350011 13.85945831 7.05796466 8.97266796 10.57879685 6.88411434 7.02981396 NA 14.15361425 12.03424863 4.29521608 9.07614486 1.36446037 5.78232993 10.06924594 10.76828872 9.21153500 11.56996556 10.40818865 9.67679348 4.63126147 11.51120551 9.90895923 7.72422733 8.01373414 0.94942287 10.85708206 14.74683159 7.74707987 10.81414230 10.48341888 10.60198653 2.75678847 7.22556511 8.20525565 9.31357487 11.69930970 -1.63531552 3.53439783 7.21934570 9.95553251 10.55584548 5.77386977 5.73951601 3.91906353 10.73243847 12.13895599 -0.63553963 14.04840444 5.84021143 7.17183231 12.29327368 12.30093167 12.43023046 8.05097831 9.70544059 10.87598336 10.90471966 11.18266046 4.93433250 8.61003043 12.19845493 12.26336252 -0.05050242 10.14501747 9.01552935 -0.05050242 3.26558692 9.98378071 10.29003221 9.09918736 9.14008791 15.00021005 9.41840354 9.92481057 7.61003043 4.31867114 15.89098464 11.17263752 13.45773025 13.43870286 10.24406099 9.70377106 8.43861930 10.64576740 0.02749700 0.53590000 0.54506000 -0.00180140 -0.00180140 -0.00940460 0.51490000 -0.00152430 -0.00152430 0.00041593 0.00041593 0.00041593 0.01544700 0.52258000 0.02034300 0.02034300 0.02034300 0.00736090 0.00736090 -0.00478840 0.01153900 -0.42243000 -0.47382000 -0.47382000 -0.47382000 0.05637000 0.05637000 0.05637000 0.03951900 0.02749700 0.02749700 0.00000000 -0.00180140 -0.00940460 -0.00940460 -0.00055444 -0.00055444 -0.00152430 -0.00152430 -0.00152430 0.51821000 0.00110930 0.00041593 0.00473220 0.00473220 0.02346000 0.06813300 -0.51918000 0.01572700 0.02034300 -0.50846000 0.00736090 0.00736090 0.00736090 -0.00478840 0.01153900 -0.42243000 -0.46802000 -0.47382000 -0.47382000 0.00754420 0.05637000 0.05637000 0.03951900 -0.00791160 0.06537000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 8.79910609 12.96119165 8.60765174 10.08215423 1.98975665 11.09876397 -0.63553963 -0.05050242 8.33170387 8.84324743 -0.63553963 8.74372600 3.22246455 10.53220951 9.08386648 0.36446037 9.64176511 9.69651431 12.49569167 9.08728541 9.26814124 7.56415025 10.86507069 3.40887487 10.55615386 9.67679348 4.36447438 -0.05050242 10.30185157 4.43056629 12.78272569 12.16881049 8.68075931 10.39583432 9.10425828 9.20604219 4.64987983 1.17184731 -0.05050242 3.82391237 8.69875119 9.43661036 10.95295814 6.84425759 8.12489830 6.82390982 9.79179063 6.14583842 9.22401253 NA 11.36289190 1.94942287 5.41976135 10.27326818 5.78612061 4.00833449 9.50594629 8.39790091 7.36165696 -1.63531552 14.27350358 -1.63531552 9.85783283 NA 7.17825850 6.23484233 7.88607819 8.71099132 12.519370 4.903636 8.919067 12.593522 10.475669 10.916186 13.158894 10.713759 9.419082 10.814400 13.038008 10.491505 9.313575 8.372906 -1.635316 6.926721 10.734620 11.40236783 7.35883139 9.36377317 9.20289395 7.50402921 10.28920116 7.37849862 7.11936552 11.35776999 6.47821953 0.68643329 4.91906830 6.06227933 11.07958178 10.22905083 7.67962718 8.08043969 12.31110994 5.47300107 9.21153500 10.62598503 11.09706920 10.38615177 10.65737455 8.57149214 -0.63553963 9.36873343 8.36722252 5.20996797 10.55584548 6.64524916 10.18085747 10.73243847 7.08899171 14.70122837 10.18864101 10.30001112 12.31001303 10.63943821 9.64408826 -0.05050242 TCGA-BH-A0HQ 56 0 NA 1121 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white NA 56.63.0 5 2 3 NA NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.39057e-07 11.1776676 6.9190528 6.9403477 11.7433556 1.1695402 9.7849649 0.4325319 9.7923031 12.0298302 7.3192666 9.4174466 7.5480304 8.8754969 9.4732999 7.2780433 8.8546181 10.8359207 9.4212382 7.0764094 1.1695402 10.1079226 10.4339618 13.2169839 10.5648390 8.9845822 10.4465740 4.3711546 10.3662442 -0.1524841 4.5755120 7.6709586 12.1961809 12.0552155 6.2988013 13.7991945 13.2929939 9.7775890 7.7574840 4.6289485 6.6420069 7.9794481 9.4193436 8.4493616 13.0419631 1.8475961 11.6834441 13.9119549 5.3867489 10.0770107 11.1616077 6.6741400 5.4174475 NA 15.0080945 9.2988022 3.2399021 8.6741396 1.1695402 4.7544814 9.9190534 9.4887395 10.3070226 11.6909232 10.4833091 9.8155378 5.0374174 11.4447125 10.7110030 7.3273712 8.3573659 11.7100347 11.1988063 15.1101998 9.1739756 11.6219663 11.4219480 8.1852129 1.1695402 5.2738553 8.4060119 8.8947150 11.1564988 -1.1523237 6.0570451 7.5686904 9.0967044 10.4732999 4.4021832 5.1143795 4.4914491 10.5596881 11.7111966 1.8475961 13.4014003 6.6867946 7.1829812 12.3104767 13.9032971 12.4406319 8.8133753 10.7996042 10.6926890 10.4870222 11.1539376 5.1695202 8.4419158 11.6926890 11.7807284 -0.1524841 10.2837820 9.2452656 2.3070204 4.3102965 9.4687271 11.3889297 10.3054848 8.9845822 14.6342691 10.3779974 10.0509390 7.6867946 3.8475861 15.6898677 10.8021509 12.9932844 11.8875382 10.4174466 9.5686902 8.4456435 11.2712401 -0.05135800 1.19180000 1.28490000 -0.04879000 -0.03640100 -0.02001300 0.17148000 0.34399000 0.35082000 0.59075000 0.59075000 0.59291000 0.03760100 -0.02853300 -0.00134180 0.04363600 -0.02132200 0.01812000 -0.04851900 0.48307000 -0.01908200 -0.05715700 0.32558000 0.32558000 0.32558000 0.29385000 0.37461000 0.32542000 0.37542000 -0.02210000 -0.01003900 -0.06052100 -0.04391500 -0.02388200 -0.05661800 0.16992000 0.14935000 0.34059000 0.40369000 0.40822000 0.29480000 0.33108000 0.64140000 -0.02317600 -0.01509600 -0.01509600 0.01526500 -0.05594400 0.00065085 0.01163600 -0.02458500 -0.02374500 -0.00065553 0.00142580 0.43053000 -0.02225100 -0.01082900 -0.45118000 0.32558000 0.32558000 -0.05500100 0.29035000 0.28591000 0.33669000 0.40601000 -0.35050000 0.000 0.000 0.000 0.000 0.000 0.000 0.455 0.000 0.000 0.523 -0.381 0.326 0.326 0.000 0.000 0.325 0.325 0.000 1.336 0.352 0.352 0.368 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.379 0.379 0.331 0.331 0.626 0.626 0.000 0.000 0.131 0.000 0.000 0.000 0.000 0.000 0.000 0.455 0.000 0.000 0.523 -0.381 0.326 0.326 0.000 0.000 0.325 0.325 0.000 1.336 0.352 0.352 0.368 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.379 0.379 0.331 0.331 0.626 0.626 0.000 0.000 0.131 8.3828665 13.7662214 8.0374157 10.2339924 3.0159079 11.4294977 0.8475961 0.8475961 8.6468726 7.9922495 0.8475961 8.1167177 2.7544814 10.1467990 9.4002602 1.6549396 8.7604804 9.5488974 11.6472774 11.0515507 9.4528297 7.5058028 10.9032124 2.8475961 9.4678109 9.8155378 3.6024806 -0.1524841 11.0367979 2.7544814 12.4049350 12.0883824 7.6091425 10.4632207 6.8532160 9.7332874 5.2399097 NA 0.4325319 9.1661340 9.5340916 9.4732999 10.1120336 4.8017898 8.9371872 6.8305849 10.5204583 5.8810136 9.2759513 0.4325319 11.5701851 1.6549396 4.0955194 9.9306115 6.0116924 3.3711546 9.5102594 7.4136449 6.4250195 0.8475961 13.6038346 0.4325319 10.2858630 0.8475961 8.8032409 5.2226307 7.7514731 9.0200185 12.7075547 4.9350542 8.4155470 13.7991945 10.1835396 11.1604740 13.0419631 12.5101481 9.0139800 10.5031217 12.9128388 9.8119319 8.8947150 11.4486653 -0.1524841 6.9136805 11.5369339 11.270970 6.057045 8.675727 9.256982 8.565267 10.602149 6.248470 6.945623 10.564839 5.561836 4.869960 7.331407 6.674648 11.657761 10.265444 8.736334 8.482402 11.874979 5.132992 10.307023 10.141637 11.440515 10.075808 10.999559 9.212820 -1.152324 9.814176 6.273855 5.386749 10.473300 7.428791 10.248470 10.559688 7.256982 13.882562 9.893351 10.212273 13.026956 11.015323 9.819135 1.432532 TCGA-BH-A0HU 52 0 NA 392 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white NA 56.63.0 6 3 3 NA 2 4 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.112456e-07 11.24872475 3.78430505 7.79743911 11.55828701 -1.57303755 10.26988746 NA 9.45810820 10.94023239 8.30939450 9.66455893 7.02666397 8.41116987 8.29711620 9.09030962 9.21954173 9.94491290 9.59165848 6.44356024 1.88619894 10.41614600 9.65075325 13.21133526 10.77021483 8.98325757 10.32799560 5.54569351 10.84671167 -1.57303755 0.01178186 6.07060829 10.10006057 12.77201815 6.80612940 12.80836206 12.90273821 9.90147153 4.55603696 0.74871883 6.11325250 8.24693057 10.31244793 6.35156473 12.89887116 3.88617943 10.24613228 13.31734831 6.23410656 9.88874249 11.32043227 6.64592065 3.98134123 2.33365271 14.16627347 9.85981522 1.23413340 7.86346276 NA 2.95031910 8.54309564 9.84618504 8.94737014 10.25964159 9.68531752 9.54893247 1.88619894 10.83826250 10.46017450 5.60666134 7.86762099 1.42674781 11.65120546 14.38743227 8.14000046 10.13583534 10.54309544 7.69353783 2.01171031 1.59669666 8.74980642 8.94737014 10.65827272 -1.57303755 5.24692867 7.51950888 10.59416969 10.49854907 4.42675452 4.73053127 4.40403114 7.56630297 12.11805884 3.28473621 13.08819562 6.23410656 7.59416931 11.07218480 12.71070800 12.36568784 8.78540277 11.16167276 10.22035487 9.56310187 10.44564715 3.23410273 9.23973098 11.79334693 10.19245200 2.12720404 10.23892882 9.88720736 0.42674781 4.59947848 8.86865837 10.93256305 9.21872838 8.98038067 15.11022594 10.35785832 10.26280192 8.23571557 3.55603696 14.65299435 6.73963481 11.90653179 11.01640265 10.22967167 10.79525800 8.16146096 10.91904289 0.0975490 0.7658100 0.7355000 -0.3479000 0.8170900 -0.2130400 0.0592290 0.0771480 0.0318650 -0.7272900 0.7759900 0.7463300 0.1844900 0.0624870 0.0759970 0.1096500 -0.5852900 -0.1613000 0.0000000 -0.7339800 0.0057414 -0.7160400 -0.6559300 0.1042500 0.1042500 -0.0332630 -0.0332630 -0.0332630 0.1305200 -0.6938200 -0.7333600 -0.3255300 -0.3479000 -0.5911600 -0.3152900 0.0592290 0.0592290 0.0771480 0.0304320 0.0318650 -0.0936620 0.0428800 -1.0290000 0.0608000 0.0608000 0.0608000 0.1734000 0.0624870 0.0845040 0.0721150 -0.7366100 -0.0127070 0.0000000 0.0000000 -0.7339800 -0.0514460 -0.7160400 -0.7018100 -0.6559300 0.1042500 -0.7211900 -0.7033400 -0.0332630 0.0909430 -0.7124700 -0.6948600 0.138 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 0.138 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 7.56630297 13.11653116 5.27223973 9.14013803 1.01171031 11.66291524 -1.57303755 NA 9.84354911 7.07420998 2.81907545 7.88002242 3.55603696 10.27302545 9.87950759 4.59667877 6.10623105 9.54504381 7.43237570 10.72996150 9.24993568 7.77989857 10.28084070 -0.57325219 10.20195027 9.54893247 3.59667281 0.01178186 10.17578293 1.74867590 12.56502332 12.28638336 6.83614253 9.18747159 8.42251853 10.28356612 4.55603696 1.74867590 -0.57325219 5.16821680 9.29325782 9.79634889 10.98421521 3.71215553 7.37316097 8.04880344 10.31549479 5.28473250 9.64592011 NA 11.62841601 -0.57325219 3.33363840 10.03931143 6.11667873 1.74867590 8.81799507 6.61162684 5.43798006 0.01178186 14.13138469 0.42674781 10.25885042 0.01178186 6.64107054 4.18163531 7.40403114 8.43377862 10.045068 8.115002 8.709840 12.808362 9.682370 11.475579 12.898871 11.286286 8.415436 10.069255 12.978219 10.434830 8.947370 9.910567 3.380951 7.865543 11.154247 11.3663307 6.8902764 8.5650232 9.3456148 9.6288753 10.8986985 5.6165753 6.8147683 10.7702148 9.7350906 0.7487188 5.9736457 8.6995794 8.9794206 10.4636119 8.3029003 10.4327269 9.9889939 4.0117103 8.9473701 10.6967548 10.9731637 9.0506331 10.9954202 7.4518911 2.6746866 9.2557925 8.9681870 3.8530176 10.4985491 5.7213727 10.8273641 7.5663030 7.7005472 13.9866663 10.0173386 9.7604660 12.5776094 10.7960762 10.1812215 1.2341334 TCGA-BH-A0HW 62 0 NA 1561 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma no 0 asian NA 56.63.0 3 1 1 NA 2 4 1 1 3 5 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.946798e-07 11.5349747 1.2473807 6.6986172 10.8685427 -1.7524370 10.6175491 -0.1676365 10.0172445 11.1537335 11.9749017 10.4381573 6.8473192 10.0462834 9.1208506 8.2117477 8.8086946 10.8058273 9.3141686 7.5894811 -0.7526801 11.2582843 9.5403034 13.9225642 11.9020426 9.9478463 10.5930890 1.0547790 10.6744471 -0.7526801 0.5692966 5.4072780 9.4279374 13.5841921 7.6631482 14.0752455 12.7118247 9.7870501 6.5557456 3.2474111 7.5961346 8.6557364 7.8749408 5.3766898 13.7539311 0.2474415 8.4248260 15.1780285 NA 9.2023298 11.4249819 8.6514837 9.0881845 -0.1676365 12.5546686 8.9863432 3.1542916 5.2697738 5.4953338 4.3134926 10.0723654 9.4586865 8.9804218 11.1668287 9.2965744 9.8776737 -0.7526801 11.3361948 10.3869579 6.5328094 6.0418234 1.9478531 11.7820742 14.4907666 7.1076554 10.7537142 12.2415832 11.2461733 -0.7526801 NA 7.4762253 8.7037610 9.6011048 -0.1676365 5.4953338 7.1751842 10.8838047 10.2293306 6.0287658 2.5693453 4.1781410 9.9352197 11.9187265 4.7865650 13.3835566 6.6180947 7.9020428 11.2106640 7.7392595 12.5841921 7.8058270 10.7109310 10.9599336 10.9360940 11.0559686 5.3348686 8.9109647 12.4913987 13.5609628 -0.7526801 10.2142725 8.8712880 -0.1676365 4.0557943 9.9706409 10.2673448 9.9867653 8.8804018 15.5833639 11.7514807 10.2880389 8.3546236 -0.1676365 15.5262281 4.2697738 11.3811910 9.0683833 10.4840188 9.3315507 8.1587985 9.9529353 -0.3964200 -0.3964200 -0.3964200 0.0481200 0.0479780 0.0456400 0.0662290 0.0400440 -0.8821100 3.6569000 2.5476000 0.8500800 -0.3919600 -0.3933000 0.0357100 0.0357100 0.0357100 0.0192230 0.0192230 -0.0058140 -0.0015243 -0.0062702 2.2746000 1.4861000 1.5180000 -0.0396650 -0.0396650 -0.0550950 0.0127950 -0.3964200 -0.3964200 -0.3766200 0.0465590 0.0456400 0.0567980 0.0559020 0.0559020 0.0400440 -0.8798400 -0.8947300 0.0553730 0.0517390 -0.9071500 0.0146090 0.0146090 0.0146090 0.0146090 -0.3933000 -0.3933000 0.0528100 -0.8835600 0.0192230 0.0192230 0.0192230 -0.0058140 -0.0015243 0.0000000 -0.9128600 -0.9113800 1.4861000 0.0742650 -0.9304500 -0.0550950 0.0127950 -0.0220580 -0.0031859 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.607 1.518 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.607 1.518 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 6.2131917 11.1524174 5.0928966 9.0006234 3.6386879 10.8134606 2.0547443 NA 8.8048703 8.4905806 -1.7524370 5.5267856 5.6137291 10.3490541 9.5385773 5.5602900 4.8912636 9.5894813 10.5400158 11.7842609 9.5532176 8.2389282 11.2941896 -1.7524370 10.3523329 9.8776737 1.0547790 2.1542916 12.0768321 3.1542916 12.0757415 11.6642041 6.7591598 9.7645839 7.8267226 9.9922405 4.1781410 6.2131917 NA 3.2016025 9.5368492 10.0320415 10.3282241 1.5693453 6.1138817 6.1115927 9.9154051 6.1115927 11.0256891 NA 10.5047945 -1.7524370 4.6224443 9.8450587 6.1567606 NA 8.4298009 5.8621166 4.6397242 -0.7526801 13.8215862 0.5692966 10.3895137 -1.7524370 8.9207158 3.1542916 8.2999745 8.7699882 15.199542 5.142226 8.712973 14.075245 10.256185 9.663148 13.753931 14.414942 9.156272 10.627056 11.683858 11.127755 8.703761 7.958213 1.417326 8.602758 12.741887 11.0330634 7.2417601 9.1913865 9.7841395 9.6872374 10.6656703 3.6397184 5.3869592 11.9020426 6.0287658 3.2016025 7.7885030 6.6846182 9.2952122 10.0695791 9.9215415 10.1527936 12.2104833 1.2473807 8.9804218 10.2787632 11.4981491 8.7392598 10.6794264 8.6246171 NA 8.2249157 4.7392595 -1.7524370 10.2293306 2.8912636 10.5531834 9.9352197 7.0804232 13.8665089 9.5602896 9.2139120 12.6216990 9.4141973 10.0246620 -0.1676365 TCGA-BH-A0HX 54 0 NA 829 breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 2 white NA 61.60.0 3 1 1 3 2 4 1 3 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.17947e-06 4.509738e-07 12.4571514 6.0518636 6.4033359 11.8523912 NA 9.5768664 -1.3910016 10.2473557 11.6027427 8.9521055 9.5233048 7.3968222 9.3128233 9.6096240 6.9353489 8.2419150 10.2482604 9.9626178 7.0601306 2.0683613 10.0012372 9.9920839 13.9858251 11.5268512 8.7135185 10.6208458 5.2088333 10.4457591 1.6089038 1.6089038 8.5262919 11.1828035 12.1954077 8.1127455 12.7999018 13.1596665 9.2804609 6.3368404 2.5158134 7.0309849 8.5455576 9.1872924 6.8850435 13.0675826 -1.3910016 10.2157875 13.7062112 2.6089275 9.7764256 11.3754486 8.1186945 7.3537538 -1.3910016 12.7134095 8.7484710 0.9308509 8.3503867 3.5158134 4.4669011 9.3478563 10.5188128 9.6716405 9.9637200 8.8977859 10.3890493 5.7484720 10.8908497 9.9263323 5.6750086 7.0967594 NA 9.1265891 14.9836536 7.7618889 11.3929410 10.9325374 8.3076243 0.6089038 6.8710144 8.1305201 8.9319743 10.5240521 NA 7.0846532 7.8615851 9.9866725 10.8110436 6.3024068 5.6533152 4.1007759 10.0001633 11.6650493 2.3093508 13.8598472 7.0309849 7.8110432 11.5851258 13.0092655 12.2099940 8.2125460 9.9268976 10.5616609 10.2707512 10.9135562 4.6089216 8.6187481 11.7885178 11.5378081 -0.3910016 10.2786906 9.3300189 1.1938979 1.6089038 9.4900338 10.8830066 9.4885030 9.5210606 15.0317236 11.2507457 10.3355636 7.7763376 5.1324823 15.8551871 7.1519511 11.7407767 11.3608821 9.7968904 9.0714219 8.1901205 10.4230175 -0.0492480 0.4970800 0.5277700 0.1162800 0.0463850 0.5474100 0.5069400 -0.0674170 -0.8730400 1.5596000 1.5289000 3.6569000 -0.0490690 -0.0407110 -0.4723300 3.6569000 -0.4527200 0.3953400 0.3457200 -0.4169200 2.0609000 -0.0867440 -0.0751710 -0.0623200 1.4080000 -0.4502600 0.0730140 0.0903290 0.8151900 -0.0492480 -0.0492480 -0.1218300 0.1110100 0.1239200 0.5762200 0.5069400 0.4073300 0.5132100 -0.4820400 -0.8806000 0.0041048 -0.0259890 -0.4903300 -0.0056342 -0.0056342 -0.0056342 -0.0083971 -0.0551260 -0.0218800 -0.4723300 -0.4527200 0.3953400 0.2222600 0.2222600 -0.4352500 -0.4656500 -0.9031800 -0.3927100 -0.0751710 -0.0623200 -0.5233400 -0.4502600 0.0903290 0.9715800 -1.2929000 -0.0934950 0.000 0.000 -0.472 -0.472 0.346 0.346 -0.435 2.107 -0.159 0.012 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.507 0.507 -0.452 -0.843 0.000 0.000 -0.490 0.675 0.000 0.000 0.000 0.000 0.000 -0.472 -0.472 0.346 0.346 -0.435 2.107 -0.159 0.012 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.507 0.507 -0.452 -0.843 0.000 0.000 -0.490 0.675 0.000 0.000 0.000 8.0765254 12.8856984 7.6004415 9.1872924 3.1324781 10.6288579 -0.3910016 1.1938979 8.3621363 7.5277827 0.6089038 8.3935543 3.0012438 10.2355414 8.8401409 4.0012348 8.0435479 10.3613003 8.8305070 10.6658960 9.6787521 7.0683516 11.2982626 1.6089038 9.5703694 10.3890493 3.9308509 -1.3910016 11.3278806 3.4669011 12.2903777 12.2174056 8.2491647 9.8989386 7.9398366 9.7529406 4.9127026 2.0683613 -0.3910016 8.0033824 8.4194913 9.2839947 10.0357086 5.5037367 8.3059395 7.6963827 10.3566931 5.5514330 10.7207074 NA 10.2626605 4.3638089 4.4418088 9.5821578 6.5672397 3.1324781 9.0549692 9.6498944 6.1246197 6.1635088 13.8976416 0.1938348 10.6843989 -1.3910016 7.9576477 5.4915613 8.3368404 8.2273050 14.871874 5.527783 9.105773 12.799902 9.584768 10.642687 13.067583 13.075442 8.218929 10.810125 13.026574 12.226387 8.931974 9.342783 1.193898 8.206972 11.603450 10.8226315 6.9487702 8.8437371 9.0887000 8.5904871 10.1138131 6.1246197 8.5790255 11.5268512 8.0601306 0.1938348 7.0518636 7.2800711 11.4596926 9.8674857 8.4761986 9.2162499 11.3713017 4.5631154 9.6716405 9.9920839 11.0516041 9.7999790 10.6702909 9.0549692 -1.3910016 8.8610649 7.1551967 5.6201465 10.8110436 7.3162788 10.3861751 10.0001633 7.1863490 13.8868246 10.6046868 10.1514679 11.9183961 9.7336872 9.3419351 0.6089038 TCGA-BH-A0HY 60 0 NA 1545 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 61.60.0 6 3 1 3 3 2 1 2 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.17947e-06 3.469029e-07 11.5311664 5.3245766 7.1711027 11.5709369 -0.4435951 9.3196057 0.8782937 9.3112808 11.9087127 7.0562389 9.2270496 7.5953127 8.5634205 9.1469805 8.5578014 8.9636611 11.0409645 9.6392077 7.4632840 2.1413674 10.5942835 11.5642966 13.9636611 10.6194513 9.0024426 10.7162646 3.2568295 10.9392875 0.5564049 NA 7.6224824 10.4217400 12.7440547 7.4812061 17.1756748 12.4579202 9.3311803 4.2288187 1.3637318 6.0402086 7.5620180 6.9742459 7.5676207 13.1955645 -1.4437913 10.8527360 13.0609020 7.0280685 9.1787746 11.6002751 7.5076781 8.5787610 0.1413020 13.4025874 9.9991192 2.7263081 7.0562389 -1.4437913 4.3112779 9.4752566 10.2433316 8.4205797 10.6665503 9.9529982 10.5966831 4.6649151 11.0877748 10.1028056 6.5507468 8.9742459 1.1413674 10.6174270 15.5355841 8.4666911 11.3659605 11.5651721 8.0562394 0.8782937 3.9487130 8.1032878 9.0897230 11.3408237 NA 5.7852131 7.3344708 9.4849117 11.3087740 3.8783232 3.4632824 3.6438562 11.5254200 11.7004142 4.4390380 13.3495394 6.6170898 5.9910206 12.0956733 13.9007933 12.5853354 7.5393868 11.3599191 11.4604634 10.9409073 10.9808221 3.9139425 7.7707128 12.3982525 11.7469897 NA 10.5422353 9.1939240 2.8783134 3.9150045 10.0173612 10.4065801 9.9620667 9.7536101 15.2476734 10.6147234 9.6772792 8.7350581 2.2568295 15.5708498 10.6251717 13.8026886 11.5992497 9.0848474 10.0239989 7.4359769 11.1003942 0.0141900 1.3815000 0.9728900 1.0253000 0.5353800 0.1193200 0.2678100 0.0539480 -0.5301200 1.9878000 1.7257000 0.1589400 0.3122500 -0.0096806 -0.5317500 3.6569000 3.6569000 -0.0327940 1.0111000 0.0319990 0.0161460 -0.5293000 -0.0120240 3.6569000 1.1468000 -0.2109400 -0.2109400 -0.2109400 0.4914700 -0.0440090 0.0141900 0.0000000 -0.5484700 -0.0956050 -0.4942300 -0.5292000 -0.5292000 0.0070334 -0.5301200 -0.5454200 0.2123800 -0.0289840 -0.7815800 -0.5140500 -0.5091900 -0.0048461 0.8726900 -0.0096806 -1.1180000 -0.5317500 -0.5637600 -0.0327940 -0.5527600 -0.5577400 1.0099000 0.0161460 -0.5366200 -0.5734800 -1.1223000 -0.6119100 0.4679300 -0.2109400 -0.2109400 0.4914700 -0.4758000 0.4654000 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.536 0.449 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.573 1.066 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.536 0.449 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.573 1.066 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 7.5507468 13.3128975 5.2978590 9.3045861 1.6181917 11.2687054 0.1413020 NA 8.7597414 8.1032878 NA 7.2239660 -0.4435951 10.7572920 8.7363025 2.1413674 7.2252788 9.6244998 9.9831823 11.7000954 9.7154131 7.5648217 11.3371382 -1.4437913 7.5076781 10.5966831 1.3637318 NA 11.9923240 2.6438562 12.3660610 13.1593241 8.1711032 9.7621867 8.4527256 9.6694843 3.6438562 1.5564049 NA 4.5336755 8.3540550 9.8601742 10.3287079 5.0321273 8.9257072 7.3924437 10.7118441 6.3701747 10.4523472 NA 9.4647859 2.8043221 4.6007871 9.5813322 6.6285534 2.2568295 8.6170894 6.8873108 4.5336755 1.1413674 13.6953850 1.8783330 9.8492901 NA 8.5393868 4.7852105 7.3245775 7.5221774 13.644693 6.263752 8.699776 17.175675 10.345112 10.430606 13.195564 12.026671 11.735973 10.865870 13.608664 9.498175 9.089723 10.271068 -1.443791 7.451211 11.195282 12.084359 4.414372 8.910643 8.516395 8.370175 11.413538 5.905122 5.736302 10.619451 8.205650 2.463282 7.148851 7.208342 12.532957 10.696904 6.064189 8.919433 10.362540 3.556393 8.420580 10.082403 10.737546 10.191658 11.226164 8.672737 3.556393 9.415454 6.578761 3.200253 11.308774 7.152583 10.904568 11.525420 6.999337 14.281680 10.078484 9.733190 12.488423 11.283037 10.387701 0.141302 TCGA-BH-A0RX 59 0 NA 170 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white NA 72.63.0 4 4 2 5 3 2 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 12.52997407 6.04312355 6.17300547 11.38503806 0.93462972 9.16702091 NA 8.68111435 10.87528069 7.55298565 9.06130449 7.35666500 8.22461867 9.99394447 7.30528749 8.73063962 8.43643713 10.78009008 8.32476876 8.15376836 9.28443409 11.67501324 13.46457953 10.27054856 9.70856335 10.34981364 8.45620038 9.92470400 0.51954190 NA 8.32691749 10.85904141 11.82505433 7.07925863 11.74235744 11.51297270 10.28829823 5.63504041 0.51954190 7.89749578 8.91616729 6.98444808 6.95696735 8.49302081 -0.49980982 12.08736020 11.44363271 8.05094404 9.72588496 10.00068920 7.36922828 4.88879682 1.25652763 15.10230687 10.51389238 4.18252546 8.37131142 -0.06537028 6.97899411 8.55665166 9.47181846 9.75955884 9.78712960 8.74034374 10.19845609 4.79257949 9.85569715 10.07287179 3.18253340 7.09447150 3.18253340 7.56395661 14.97143901 6.97587547 10.49827301 10.61891036 9.88296731 1.74196308 7.63503969 8.06388309 8.66081812 12.61110809 0.51954190 5.00068962 7.01141513 11.02570476 10.93952272 5.78008958 7.68614401 4.42645263 9.99191492 11.84599201 3.02206593 13.22835903 4.48918967 6.94022432 11.21942412 13.08196397 11.98138301 7.58923616 10.90434628 10.75756911 10.12627612 10.10013523 2.93459198 8.68948752 10.90182627 9.23266268 3.02206593 10.51956254 10.71595976 0.93462972 2.84149013 8.91616729 10.06001346 9.49014770 9.15255764 15.44361724 10.95488550 10.45128500 6.11450862 2.39402017 13.70459279 7.02735756 12.28457229 12.73205890 9.83017529 9.69198999 7.76748994 9.87566965 -0.0065050 0.3687100 0.3687100 -0.1027600 0.0000000 -0.1102400 0.0808680 0.1081800 -0.0540800 -0.1213500 -0.1213500 0.5537200 0.3318900 0.0065422 0.0332670 0.0332670 0.0332670 0.0029133 0.0029133 -0.1088000 -0.1115500 -0.1148200 0.0413170 -0.0332140 -0.0332140 0.0091705 0.0091705 0.0150280 0.2047500 -0.0994080 -0.0065050 -0.0761450 -0.1027600 -0.2372700 -0.1102400 -0.0752570 -0.0752570 0.1081800 -0.0540800 -0.0540800 0.1149200 0.1149200 -0.1213500 0.3375500 0.3375500 0.0019418 0.0033299 0.0065422 0.0065422 0.0332670 0.0332670 0.0029133 0.0029133 -0.0126230 -0.1088000 -0.1115500 -0.1281600 0.0359470 0.0413170 -0.0332140 -0.0012473 0.0091705 0.0150280 0.2047500 -0.0858550 -0.1376200 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 9.485347 13.023471 4.715959 9.424448 3.140157 10.978653 4.519561 4.063883 9.471818 9.753981 8.757967 8.794135 7.365053 10.939523 8.884427 1.256528 7.992592 11.033290 8.599936 9.750784 8.257993 6.163418 12.012918 3.301968 8.657407 10.198456 5.220001 NA 10.898219 1.934592 14.194784 12.924793 9.345051 9.968023 10.868659 10.436935 3.022066 3.519567 1.519542 1.519542 9.107027 10.466469 7.022063 5.377544 8.517194 8.283328 10.558482 6.300922 10.084347 2.394020 11.232663 3.022066 4.549312 10.300862 6.829054 8.292152 9.517683 9.057428 10.829797 5.945828 14.240555 1.934592 11.042144 3.104521 9.257655 8.430455 8.220002 8.139171 10.641959 8.456200 8.213049 11.742357 9.527057 11.322348 8.493021 9.912595 8.628087 10.165821 13.099978 11.674170 8.660818 8.578456 4.292149 7.233809 10.929307 10.99833212 4.57845572 8.53265242 9.18371353 8.38992727 9.97780509 8.15860161 7.65227639 10.27054856 8.22231239 -0.06537028 9.81111696 8.53321096 10.79568692 10.35403357 7.26102958 9.36505252 9.05094404 9.01408493 9.75955884 10.39198086 10.45521871 10.64712704 10.60569878 8.43842594 NA 9.19685929 8.28067057 9.24634823 10.93952272 6.40220542 10.99128516 9.99191492 7.28332824 14.23377226 10.36766373 10.91080610 12.48810933 11.02801758 8.86385856 6.30092175 TCGA-BH-A0W3 58 0 NA 728 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 5 5 1 2 NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 10.7265032 4.7197584 7.6583557 12.2912562 NA 11.0283987 2.1347795 10.0953750 12.1024524 10.9181195 9.9415046 8.0416843 8.6314477 8.1280155 8.3107177 9.8072192 11.2105403 9.2976885 5.9108981 -1.1870500 10.5111363 8.9664178 13.3036539 12.0356606 10.2464512 10.6270476 4.3674549 10.8883315 NA 4.0982679 6.5610588 10.9223700 12.0822847 5.1527148 13.4758122 13.4341163 9.4081231 6.5876530 2.6202110 4.9213887 8.1460213 11.0341507 5.8240932 13.8299786 0.8128678 9.6977994 13.7737727 8.7332184 9.8610801 10.7095765 4.8789558 5.6072830 -1.1870500 13.7194388 9.2568453 1.3978030 7.6583557 NA 2.7197530 10.5111363 10.7735917 11.8538403 11.0968222 9.7324739 9.4449521 -1.1870500 12.0185062 10.4773129 7.0271850 8.6153821 4.9626138 10.9530564 13.4627955 9.1295772 12.6050459 11.7283717 8.2763901 NA 7.1302781 8.4220446 8.8599897 12.4229678 -1.1870500 3.2722920 7.5677531 8.6520695 11.7826120 3.1347959 4.9421485 5.1166475 10.5685879 11.8495545 0.8128678 13.4411404 7.4275752 7.8572601 11.8024376 12.0457363 13.1838255 8.0296113 10.3236299 10.4155645 10.0576636 11.2422724 4.7901465 8.5390840 11.6882311 6.0889896 NA 10.2386061 8.7743153 -1.1870500 3.0623117 9.1166465 10.4526586 9.7436030 8.7480308 14.9423500 9.9016539 9.1660127 9.3067211 1.6202110 16.0670824 9.9965010 11.9411823 11.2124107 10.2137451 9.7937194 8.2137453 10.9424900 -0.3653300 0.4385100 0.4385100 0.0770950 0.0756570 -0.3630600 0.0907200 -0.3707600 -0.3707600 -0.3659500 -0.3659500 -0.3652200 0.0716780 0.0716780 0.0258120 2.3581000 2.9516000 0.0571620 0.0571620 -0.3527000 0.0895610 0.0616510 0.0383470 0.0315830 0.0315830 0.0000000 0.0000000 -0.0084279 0.0633660 -0.3955800 -0.3653300 0.0255310 0.0756570 -0.3639000 -0.3630600 0.0907200 0.1033700 -0.3707600 -0.3707600 -0.3707600 -0.0882420 -0.0882420 -0.3659500 -0.3590900 -0.3590900 -0.3590900 -0.3724500 0.0716780 0.0716780 0.0258120 -0.8292800 0.0571620 0.0571620 0.0571620 -0.3645000 0.0613540 0.0616510 -0.8307400 0.0383470 0.0315830 -0.3585200 0.0000000 0.0000000 0.0633660 -0.3523600 -0.8585100 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.798 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 -0.365 0.073 0.000 0.000 -0.370 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.798 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 -0.365 0.073 0.000 0.000 -0.370 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 8.0368676 12.1346529 2.7197530 9.2233171 1.6964835 10.6801445 0.3978030 NA 8.3166915 4.6202228 -1.1870500 5.0529897 0.3978030 10.5369531 9.6599231 3.7670615 7.1392955 9.2568453 12.2464511 10.7046494 9.6764712 8.0726091 9.1802804 3.3978303 9.4522064 9.4449521 4.2722995 NA 10.5390839 1.1348124 11.4229678 11.6907249 6.0982679 9.8599896 8.6186094 9.3827213 4.4275727 1.1348124 0.3978030 9.6622708 9.2401786 9.4513016 10.4294146 2.3978303 8.9133966 7.7257548 10.3860395 5.9626138 9.9676838 NA 12.7042697 3.7670615 6.5133060 9.6516835 5.6858168 -1.1870500 8.9827908 7.7524449 5.5271110 NA 13.3689526 0.8128678 10.0241457 NA 7.3789199 3.5677523 7.5339651 8.8923503 15.132030 6.247495 8.382721 13.475812 9.829674 10.939893 13.829979 12.956408 10.669610 10.992153 12.688423 8.695509 8.859990 8.270247 2.513314 7.134794 11.664810 10.910569 8.262014 8.620221 9.416492 9.784409 10.577804 6.926608 3.670852 12.035661 7.070254 1.982802 5.471077 8.006342 8.438574 9.884328 7.658356 8.774315 12.901902 3.134796 11.853840 10.216943 11.669097 9.818490 10.428035 8.380822 1.982802 8.844140 5.456721 1.982802 11.782612 4.427573 10.576078 10.568588 7.460324 12.584252 10.015602 9.368413 13.138171 10.360724 9.249577 NA TCGA-BH-A0W4 46 0 NA 759 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 74.60.0 5 2 2 2 2 1 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.112456e-07 10.7873972 7.0154173 8.2291110 11.5155001 0.9421579 10.4813273 0.6791535 10.1995564 12.3537678 11.2624050 10.1552727 7.6518267 9.0961427 8.8953950 7.9384064 8.8992705 10.8053224 9.5501153 7.8905355 2.7495128 11.0196519 10.0140778 13.6698763 11.9557238 9.7125571 10.8309118 4.0851272 10.5745519 -1.6429548 4.1120912 8.4420146 13.0304047 12.5533517 6.6472253 13.0968812 13.0126808 9.8222622 6.6564134 4.0010636 6.8530612 8.6529751 9.7850426 8.7409104 13.3035641 4.5470302 10.3649342 14.4166139 5.7834698 9.1375653 10.9524635 9.2182930 4.8807688 -1.6429548 13.5091850 8.5920234 4.2398486 7.8490591 0.9421579 3.6426092 9.9801730 10.1237350 9.8997543 12.6302002 10.3077620 10.5935192 NA 11.7427988 10.4618048 7.1286955 7.4393547 8.7092496 11.8293891 14.9819158 8.5260911 11.1912820 11.7310228 8.1352830 0.6791535 5.8084159 8.7697760 9.4618048 11.9080730 NA 4.3795724 6.9829149 9.7289827 11.4256484 7.0576452 4.0296296 5.1253907 10.4929153 11.8868806 2.0576582 13.4462012 5.8166381 7.7665971 12.9062687 12.3581743 13.1360019 8.1253902 10.5727391 11.0761669 10.6359139 11.4563894 5.5956111 8.5371151 12.1405112 13.2059757 -0.6427295 10.6339120 8.5629994 1.6791535 4.1648185 9.8166376 10.5531933 10.7818972 9.2633450 14.8176299 10.4430104 9.5890271 9.0109468 2.6791310 16.2752656 8.5872266 14.3614045 13.5071516 10.5002703 9.7724197 8.6734875 10.0778008 -0.00250140 -0.00207840 0.00124810 -0.00221680 -0.00221680 -0.00788630 -0.00360110 -0.00290910 -0.00290910 0.00000000 0.00000000 -0.00110870 0.00346870 0.00346870 0.00305220 0.00305220 0.00305220 0.00097064 -0.00401620 -0.00318590 0.00110930 0.00847430 0.00917050 0.00917050 0.00917050 0.01405100 0.01405100 0.01405100 0.01824300 0.01572700 -0.52113000 -0.00157270 -0.00221680 0.01964300 -0.00788630 -0.00360110 -0.00360110 -0.00290910 -0.00290910 -0.00290910 0.00903120 0.00708480 0.00000000 0.00402430 0.00402430 0.00402430 0.00402430 0.00346870 0.00346870 0.00305220 0.00305220 0.00097064 0.00388540 0.00388540 -0.00481880 0.00110930 0.00847430 -0.53723000 -0.52235000 0.00917050 0.00291330 0.01405100 0.01405100 0.01824300 0.00041593 0.01670500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.60750454 14.04643965 10.17338969 10.33448593 2.35721416 10.95432748 1.35721416 2.05765821 8.13034507 9.26934692 -0.05784211 8.30411216 3.40160316 10.08427558 9.27084356 1.16452886 8.39337973 9.41587420 12.41460552 9.55687846 9.55010917 7.98473972 11.27196485 1.81664066 9.21363161 10.59351923 5.43402100 NA 10.30812636 3.11209958 13.06083928 12.48229657 8.00646242 10.26972117 7.12207734 9.32443238 5.16456104 -0.64272952 0.35715785 8.23372320 8.66668240 8.80532245 9.65297490 6.44996243 8.88124828 5.76659781 9.61223453 6.04370758 9.55626482 0.67915352 10.28201856 3.31140139 5.39062986 9.61103587 5.74298169 3.52713291 8.87192002 7.16777739 5.54703024 -0.05784211 13.87840771 1.52712039 9.98428387 NA 8.78661270 4.67913663 8.02609126 9.06456521 13.4638691 5.4232958 8.5170772 13.0968812 10.3490821 10.0554766 13.3035641 12.7148955 9.4137218 10.9758210 13.2307463 11.3887350 9.4618048 8.8817478 0.6791535 7.5195977 11.9200447 11.587226 7.167777 8.914670 8.992924 8.499313 10.773088 4.714757 7.154868 11.955724 6.527131 3.942167 6.787658 7.017452 12.944749 9.867476 8.523369 8.196410 12.801509 4.605133 9.899754 10.039323 11.351913 9.981087 10.570006 9.492274 NA 9.399713 7.101199 5.202696 11.425648 7.115430 10.759419 10.492915 6.800149 14.105215 10.070593 10.381307 13.238798 11.370529 9.523997 1.942158 TCGA-BH-A0W5 77 0 NA 1288 breast stage iia t1c n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 74.60.0 5 2 2 5 2 1 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 8.343418e-08 10.83686397 8.34699455 7.58207497 11.28873368 0.05852431 11.21016388 0.05852431 10.14021832 11.77875728 9.20147091 9.48407870 8.20995237 8.03005683 9.70537164 6.86156834 9.75548049 10.40908391 9.95887674 8.12639525 2.05852431 11.09651745 9.35236791 12.88592189 11.07299850 9.63782902 10.97090340 8.63845727 10.31274254 1.47352718 2.86585944 9.84041917 12.38213078 12.69725061 7.51794491 12.26522218 12.57585434 10.09925943 6.22843777 1.79547605 7.50421756 9.03770014 8.93911695 8.17225498 12.29512523 4.98134579 10.94827049 12.80082247 6.92887719 9.66793185 10.89719171 7.60797679 4.17399087 NA 13.95956594 12.07334137 0.79551761 8.55170134 1.05852431 5.28090436 10.21796400 10.21880465 9.90400307 11.84232980 10.00249297 9.99858183 1.64348681 11.58745543 10.24132122 6.74501408 8.11560241 4.64347527 11.59670197 14.40273957 8.95460317 11.71642689 11.01125431 8.89245721 0.79551761 0.79551761 9.21501747 9.34853187 11.81798516 -0.52636892 5.74033666 6.83110199 10.56300098 11.01561506 5.78643431 7.89981549 5.55036509 10.47425482 11.87869197 2.05852431 13.54115294 5.94928512 7.79547865 12.52441950 13.04227860 13.14321071 7.92063392 10.30762650 10.89614097 10.67919109 11.44509407 5.07346466 8.52475952 12.01634059 10.91416019 0.79551761 10.16834368 9.56233879 2.05852431 3.68806843 10.11289127 10.90164891 10.37780885 9.46648886 15.07356504 10.40169872 10.66090260 8.77733127 3.64347527 14.78836386 9.60797679 12.86351789 12.38746839 9.83439757 9.53086531 8.12460213 9.71073654 0.00166420 -0.00138580 -0.00138580 0.00083195 0.00083195 -0.00609040 0.17890000 -0.00041585 -0.00041585 0.64710000 0.64710000 0.65424000 0.00000000 0.00000000 -0.00380760 -0.00380760 -0.00380760 0.00235810 0.00235810 0.05965100 -0.00055444 0.01782400 0.01447000 0.01447000 0.01447000 0.02454800 0.02454800 0.02454800 0.29979000 0.00166420 0.00166420 -0.00124730 0.00083195 -0.00609040 -0.00609040 0.17890000 0.17890000 -0.00041585 -0.00041585 -0.00041585 -0.00221680 -0.00221680 -0.33352000 0.00000000 0.00000000 0.00000000 0.02048300 0.00000000 0.00000000 -0.00380760 -0.00235530 0.00235810 0.00235810 0.00235810 0.05965100 -0.00055444 0.01782400 -0.12252000 0.01447000 0.01447000 -0.00124730 0.02454800 0.02454800 0.29979000 0.00013863 -0.31541000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.828 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.828 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 11.1942223 13.3349283 8.7807514 9.4393347 6.8521487 10.3194326 6.8354946 0.7955176 8.1047277 8.2099524 0.7955176 7.8333000 3.8658693 9.9164940 9.4650723 2.0585243 10.3036696 9.1556673 9.5761824 9.3592468 9.3337761 7.8529289 10.5639938 3.1174125 9.3245188 9.9985818 5.2150184 NA 10.5908689 3.4277402 13.4476065 12.0344804 7.9613907 10.3260800 8.2663410 9.1388864 5.3683668 2.7954761 2.0585243 7.3096010 8.7438458 8.9714024 9.7279887 4.5610145 6.6572355 6.7773316 10.4948776 6.8266972 9.3408293 NA 10.8958782 5.2679664 4.7589534 9.2133903 6.3849426 9.1670375 10.1393306 8.4636543 9.3454558 NA 13.8417841 0.7955176 10.4270195 -0.5263689 8.7750466 4.5179433 7.9102620 9.0910180 13.141873 5.058511 8.755480 12.265222 10.764145 10.188654 12.295125 12.571829 9.299304 11.153690 12.647696 10.717617 9.348532 8.704772 2.997112 7.439335 11.365904 10.977376 7.251627 9.098346 9.190370 8.309601 10.325491 9.076249 9.262269 11.072998 6.571583 3.758953 4.663373 6.719389 11.319237 11.288934 9.244214 8.340829 12.945988 9.545013 9.904003 10.792940 11.540817 10.290134 10.614061 9.108362 -1.526577 9.635558 7.675674 9.773903 11.015615 7.099259 10.988785 10.474255 7.878692 14.241683 10.158737 10.448682 12.729022 10.623615 10.118308 3.517943 TCGA-BH-A0W7 49 0 NA 1363 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 7 2 2 NA NA NA 1 4 3 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.024074e-06 1.595753e-06 10.8226964 7.3997821 6.5112039 11.0288200 NA 9.8454267 -0.2831408 9.6259309 11.3931858 10.2775983 9.3945075 6.9551931 8.1762195 9.4241470 7.5809738 9.6123632 10.0912841 9.8220416 7.7252163 3.4716817 10.4254407 10.2437761 13.0338471 11.0319375 9.6062919 10.4050383 8.1864297 9.9765312 -0.2831408 7.4683316 8.9480091 11.1066881 12.2046279 7.4514971 12.0801014 12.7249539 10.2540063 7.4102750 4.2086421 7.0610838 8.4915749 10.1772437 7.6593024 12.5766138 2.4172179 10.9661977 13.2568554 6.4582557 9.6999312 10.5091715 7.2442649 8.8042508 1.8867062 15.4330971 10.3714239 1.7167715 8.6490028 -1.2831408 4.6940667 9.7584471 10.1314731 8.9250224 11.1841387 9.9298922 9.9377707 1.8867062 10.2713768 9.8447822 6.8409088 7.5305694 11.1488077 10.5357694 14.1817803 7.3508367 11.5994310 10.1540199 9.5265560 2.7167934 5.2713771 8.2847441 8.3785658 11.6515845 NA 6.3962674 6.9599614 10.1149972 11.3218043 6.2403506 7.0787315 5.2086421 9.8069003 11.9457568 3.5241389 13.6614542 7.7774842 8.0319377 12.4749070 13.0209253 12.7644231 7.7252163 10.4361767 10.8405860 10.0409684 10.7477998 4.0387171 9.1409542 11.0588626 10.1940403 0.3017047 10.3958281 9.2771207 1.0387171 4.9658535 8.8447823 10.9380729 9.5345710 9.5638453 14.9023022 10.3615454 9.6304253 7.5046903 4.3892157 14.6905974 9.3415833 13.4475234 12.2296518 9.7301106 9.9010434 7.8991823 9.8777938 0.0617940 0.0617940 0.0617940 -0.0123000 -0.0123000 -0.0041546 0.5142000 1.1409000 -0.5114600 0.5325700 0.5325700 0.5325700 0.0000000 0.0000000 0.0039258 0.0039258 0.0039258 0.0116790 0.0116790 -0.0310730 0.4524100 -0.1392300 -0.4633400 0.0390540 0.0457080 -0.0204120 -0.0204120 -0.0204120 1.4902000 0.0617940 0.0617940 -0.0124380 -0.0123000 -0.0041546 -0.0041546 0.5142000 0.5142000 -0.5498500 -0.5114600 0.0248290 0.5387200 -0.5302200 0.5273100 -0.0312230 -0.0312230 -0.0312230 -0.0312230 0.0000000 0.0000000 0.0094491 0.0039258 0.0116790 0.0116790 0.0116790 -0.5171200 0.4524100 -0.1392300 -0.5378100 -0.5195900 -0.4644000 -0.0230180 -0.0204120 -0.0204120 0.4980500 -0.0142280 -0.5113500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 10.1272393 13.8183533 7.6912026 10.0102595 4.9835728 10.8735030 4.1430505 -0.2831408 9.5168789 8.3997825 2.8042601 8.0114084 2.0387171 10.5925372 9.6490027 3.4716817 8.9682702 9.6438250 9.9377707 10.7026298 9.7392460 7.5465110 10.2818899 1.8867062 8.5979017 9.9377707 4.9647175 2.7167934 10.3397548 2.5241389 13.3888264 12.5553025 8.0566377 9.4582549 10.6266810 9.7068919 5.1925217 0.7167715 0.3017047 11.8271081 8.3167006 9.5732134 9.6244298 4.8460720 7.3995018 7.4683316 9.7342923 6.1091056 9.6940678 NA 10.2506043 5.4849727 3.8867160 9.0542649 5.8244751 7.2206134 10.0319374 8.6311731 9.6062919 -0.2831408 14.0961324 2.1762270 10.2501177 NA 8.5575659 4.3017486 7.9788826 8.8665350 13.666197 6.536967 8.174169 12.080101 9.921970 10.691202 12.576614 11.231995 9.235706 10.351145 13.060668 9.925022 8.378566 9.360644 3.574768 7.574769 11.194799 11.187701 6.431033 8.999876 9.078732 7.708310 10.199848 7.899182 8.528965 11.031937 7.533771 3.240345 4.983573 7.658833 10.237407 10.382124 8.804251 9.430174 11.045182 7.916461 8.925022 10.897629 10.574769 9.513639 10.387002 8.574769 -1.283141 9.315892 8.104116 8.355224 11.321804 7.711141 10.505506 9.806900 7.104805 14.230546 10.673164 10.456568 12.036178 10.884520 9.313909 2.176227 TCGA-BH-A0WA 82 0 NA 701 breast stage i t1c n0 (i-) m0 2-10-2014 female 2008 NA NA NA yes 0 white not hispanic or latino 74.60.0 4 4 4 1 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.835552e-06 4.171709e-07 12.02688106 2.62232129 7.13890660 10.97670266 -0.54750999 10.47581367 NA 9.60659102 11.79808827 10.26016318 9.76358652 7.88494769 9.59770118 10.21893467 7.89119739 8.19049782 9.40077294 10.40150301 8.89845507 4.18032293 10.08039558 11.27018896 12.96601005 9.63355799 9.39345331 10.37238637 5.59195761 12.09872039 7.96020065 1.62232129 8.01655538 11.95858940 13.33905502 7.43539940 11.85887657 10.83638005 10.44144540 4.87867140 0.77433376 7.87025805 8.92611153 10.42574441 6.40660129 5.31038739 -0.54750999 10.50395460 7.34418937 8.82635845 8.97789723 11.29338037 7.42394955 7.90978690 1.45238458 14.12027632 9.56957482 0.03731193 8.74242464 -1.54750999 4.28529864 8.74011804 12.64931526 9.28133568 10.09806420 9.47477368 9.95225173 2.84472710 11.55438150 9.97056711 5.37126960 7.77883541 -0.54750999 6.24682229 15.57455637 7.14240425 10.96736634 11.08107920 9.93924083 2.35929626 NA 8.13890609 9.83178416 10.64716266 NA 4.99156266 6.92813933 10.83178416 9.53588518 5.53986912 6.18711449 6.13188576 8.86814749 11.82282079 0.77433376 13.66903801 2.53987843 5.70979240 11.70181560 13.18695667 12.59682506 7.87025805 12.17894331 10.92763257 10.78386021 11.49987060 5.12483266 8.27577300 12.67437048 10.01082654 6.45803087 9.84579628 9.91234972 2.35929626 2.99837605 10.32122833 11.50633168 9.81654051 10.04392817 15.06157011 10.63013678 10.46572852 7.14937319 7.79225606 12.41701742 8.49679986 13.04310981 11.69632356 10.72182471 9.85967361 7.80995780 9.76973935 0.0176840 0.0052991 -0.2774500 -0.3151700 0.8034400 -0.4037200 1.1402000 0.7958800 0.0019418 0.8467200 0.8467200 2.3518000 0.1554700 -0.3437700 0.0437230 0.0437230 -0.4067200 -0.3794300 0.0396190 -0.3969700 -0.4036200 0.2392300 -0.3487000 -0.3487000 0.1969500 -0.2186100 -0.2186100 -0.2186100 0.0000000 0.0059700 0.0176840 -0.4060600 -0.0234290 -0.0748110 -0.4037200 -0.3593100 -0.4163000 0.7958800 0.0019418 -0.4581100 0.1429500 -0.0534380 -1.2929000 0.0852550 0.0852550 0.0852550 -0.2198500 -0.3437700 -0.2668400 0.0437230 -0.4067200 -0.3794300 0.0396190 -0.0077482 -0.3969700 -0.3825700 -0.7532300 0.0335490 -0.3487000 -0.3487000 -0.4005200 -0.6471500 -0.2186100 1.0340000 0.0472680 -0.1027600 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.365 -0.405 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.115 -0.359 0.730 0.000 0.000 0.000 -0.029 1.230 0.000 0.000 0.631 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.365 -0.405 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.115 -0.359 0.730 0.000 0.000 0.000 -0.029 1.230 0.000 0.000 0.631 7.75390199 13.33461897 2.15283240 9.31194059 3.83368960 12.43468642 0.45238458 3.87866649 8.75504479 9.99881803 7.97007540 9.04972278 5.08176143 11.03266435 8.84149925 3.09626185 4.70033429 10.30922031 6.47477348 9.19134254 9.43246674 7.93016428 12.24712627 1.62232129 9.58490558 9.95225173 1.25978468 NA 9.71332533 4.12483266 12.12062601 13.09428822 8.57004884 9.83178416 9.65514178 9.19471525 5.25976209 2.84472710 NA 8.12836301 7.94024605 8.24030860 7.83178416 8.46642646 8.86866485 6.82309332 9.66733192 7.56093043 10.42610318 1.62232129 12.86371818 1.62232129 4.82744306 9.53232378 7.41908461 3.20729941 9.18372494 8.11596387 4.66185789 4.33504728 12.92573106 0.45238458 9.88963766 0.03731193 8.56354141 6.22058921 8.88285821 6.69558048 12.901812 7.227193 7.840423 11.858877 9.250878 10.178198 5.310387 11.842172 8.753902 10.708025 12.652538 10.958961 9.831784 7.288456 3.359296 8.553068 10.664902 10.6609450 6.0671159 8.9005221 9.3905151 6.9442588 9.9306092 5.6520792 4.6812244 9.6335580 10.5408629 0.7743338 8.1248311 9.2583915 13.9406225 10.1463284 7.7168483 8.7285301 9.4657284 5.6812244 9.2813357 9.8823355 11.4196321 11.4756404 10.7115606 9.5332234 NA 9.1246277 8.0090649 4.0962619 9.5358852 7.0890309 10.0555685 8.8681475 7.6739931 13.5820108 10.5826546 10.5771733 12.7701011 10.4761602 9.4740799 -1.5475100 TCGA-BH-A18F 50 0 NA 268 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 8 2 3 NA 2 2 3 3 3 4 4 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.455874e-07 3.615481e-07 11.3105103 9.3479050 7.3365690 11.1424226 0.6500292 10.0234776 NA 10.2638581 11.8893688 8.2629372 9.6122417 7.8299776 7.9423902 9.1979271 7.3435553 9.3965829 10.0867802 9.8515799 7.6724367 4.1736312 9.3864706 10.1489178 9.6724365 10.9224068 9.7754821 10.5464010 6.3295488 10.3591525 0.2349917 -0.3499708 9.4821674 12.3709541 12.4139034 7.8979961 11.6843517 13.3806980 9.4734359 6.7481002 4.0763368 7.2084890 10.5625838 8.9203639 7.9003669 12.5074665 3.5569566 10.3999381 13.4285565 5.7896197 8.8836883 10.6934377 9.8268651 9.2265531 4.0423817 14.0352401 11.8190541 3.1736232 8.5984359 -0.3499708 5.0076216 9.9837830 10.5681864 9.2406556 11.8234334 9.5365274 9.4157690 1.9719941 11.2277335 9.9578387 7.1258019 8.6999173 3.0423817 9.6841798 14.9438815 9.3292057 10.9725602 9.8956213 8.3830839 1.6500752 3.0423817 9.1002489 9.0981850 11.8279553 NA 3.7793543 8.4016125 10.6097084 10.9717149 6.3224942 5.9261940 4.8979955 10.7467838 11.7280526 2.3504972 13.6229587 5.4574236 7.2573992 12.2456758 12.6260061 12.7577761 8.2957272 10.9957510 10.8944325 10.3730341 10.8863819 5.1094985 8.4861190 11.4650516 11.8151326 NA 11.1386620 9.2666174 1.8199951 3.7814122 9.3565647 10.8923496 10.3995191 9.0348523 15.0580666 9.4947744 9.6337748 6.9584077 2.7375353 14.6400618 9.9832239 13.0205517 12.8866061 10.2702884 9.5726531 8.1459235 10.6163434 -0.2225200 0.7497200 0.7419700 -0.2321100 -0.2328300 -0.2315900 0.0207380 0.0269100 -0.5026800 -0.5101300 -0.5101300 0.0049730 0.0236810 0.0283930 0.0182180 0.0182180 0.0182180 0.0166800 0.0166800 0.0088672 -0.2299600 -0.4870300 -0.4787200 -0.4787200 -0.4787200 -0.1862400 -0.2144800 -0.2040100 0.0264890 -0.2225200 -0.2225200 0.0000000 -0.2159800 -0.2201300 -0.2370600 0.0207380 0.0207380 0.0269100 -0.5026800 -0.5138300 -0.1569700 -0.1569700 -0.5101300 0.5105100 0.5105100 0.5004400 0.5299000 0.0283930 0.0257870 0.0182180 0.0068025 0.0166800 0.0166800 0.0166800 0.0124910 -0.2299600 -0.5082600 -0.4878700 -0.4787200 -0.4787200 -0.2320400 -0.1862400 -0.2040100 0.0264890 0.0309430 -0.4739700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.540 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.540 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 9.131868 13.394850 8.423208 10.582283 5.508048 11.151408 2.971994 2.109494 8.604265 9.049881 3.737535 8.625888 5.007622 10.504937 9.235970 1.971994 9.983783 9.464651 9.868632 9.189227 9.169990 7.212311 11.687959 2.819995 8.618735 9.415769 5.007622 NA 10.367317 2.109494 12.699407 12.018712 8.246258 9.434703 8.331307 8.960681 4.580809 1.235053 NA 3.556957 8.475027 9.604992 9.946985 6.814976 8.239495 6.949277 9.691728 6.357427 9.055210 NA 10.831842 3.173623 2.897995 9.593235 5.680184 5.364313 9.845441 8.105396 8.941239 -1.349971 13.845902 1.650075 10.193100 NA 7.470247 3.819995 7.694463 8.398261 12.050118 6.050948 8.268454 11.684352 10.442298 10.982665 12.507467 11.117419 9.133884 10.861653 13.449198 10.799498 9.098185 8.133885 3.650064 6.501818 10.971433 12.039700 7.450969 8.968612 9.277602 8.964085 11.457822 6.916855 7.238783 10.922407 6.227497 2.971994 6.672437 7.451486 11.883239 10.322936 7.364314 8.608622 12.393430 6.672437 9.240656 10.363885 10.673130 10.255548 11.321167 9.765763 9.500256 9.785740 7.440906 7.283064 10.971715 7.408292 11.137657 10.746784 7.598436 13.601581 10.043459 10.777741 12.439908 10.814976 10.037009 2.971994 TCGA-BH-A18G 81 0 NA 61 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 4 4 2 NA 1 3 2 5 1 6 NA NA 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 1 0 0 0 0 0 6 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 4 4 0 0 4 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 4 2.302783e-05 7.703756e-06 10.8237653 1.9068906 7.0084286 11.0097412 NA 9.6038581 NA 8.7034710 10.7339686 10.5851973 9.5264992 6.3880173 7.6165488 10.5410966 6.1799091 9.2318212 8.8822609 10.6342438 8.3077700 2.7813597 10.5531493 12.5148373 12.6435744 9.9925843 9.3205185 10.0967152 4.3663222 9.8572035 0.9068906 0.9068906 6.3987437 10.2333201 12.2559875 7.3717766 10.9003008 12.9070080 11.3102577 6.3987437 3.2288187 6.1421071 11.0705403 5.7976615 6.4614794 8.3359486 NA 12.7495028 12.2702953 1.3219281 9.9693865 9.9329529 6.7895336 5.8454901 0.3219281 13.8673439 11.7182653 1.9068906 8.0834793 NA NA 8.1163440 9.6302671 9.3581017 10.4849487 8.9943534 9.5579423 NA 9.8523344 9.5068034 3.9657843 8.2467406 NA 6.6706562 14.6457921 6.4656676 10.6136744 9.8542840 8.3275526 0.9068906 NA 7.5793159 8.8376279 10.6494807 NA 5.5698556 6.5216004 9.7206718 11.1899789 3.2288187 6.5117527 3.6438562 9.9384769 12.1284777 NA 13.1541259 4.4093909 5.5698556 10.9743250 15.5987250 12.2554343 7.7936033 11.7418883 11.0963034 10.1783536 10.3954002 2.9068906 8.6416002 11.2902349 8.9199806 NA 10.3880173 8.8879821 2.4918531 2.4918531 9.0967152 11.7169266 9.3401283 8.3960696 15.4160058 10.7966480 8.8955753 6.2877124 NA 12.8241383 5.0498485 12.2686516 12.7985477 9.1845655 9.9421479 7.3772105 10.4901802 -0.00470790 1.61100000 1.61100000 0.00555290 0.00305220 0.00388540 0.00319100 -0.00387790 -0.00387790 -0.00041585 -0.00041585 -0.00041585 -0.00658270 0.00430210 -0.00055444 -0.00055444 -0.00055444 -0.00650500 -0.00650500 0.00638710 -0.00013862 -0.00152430 -0.01422800 -0.65155000 1.60900000 -0.03299600 -0.03299600 -0.03299600 -0.00885260 -0.00470790 -0.00470790 0.00208050 -0.67002000 0.00388540 0.00388540 0.00319100 0.00319100 -0.00387790 -0.00387790 -0.00387790 0.00000000 0.00000000 -0.00041585 -0.00055444 -0.00055444 -0.00055444 -0.00055444 0.00430210 0.00430210 -0.00055444 -0.00055444 -0.00650500 -0.00650500 -0.00650500 0.00638710 -0.00013862 0.00374650 0.03848900 -0.01422800 -0.65155000 0.00666530 -0.03299600 -0.03299600 -0.00885260 -0.00304750 -0.00166290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.652 0.000 0.000 0.000 0.000 0.000 1.611 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.652 0.000 0.000 0.000 0.000 0.000 1.611 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4093909 13.5591381 4.8765169 9.4395712 NA 10.8117761 NA 5.6438562 8.5240519 9.6947932 NA 6.8454901 5.2526654 10.9590058 8.8533096 1.3219281 3.4093909 11.0663415 11.0954794 11.9841514 9.3260081 6.3553511 9.6222807 0.9068906 7.9693865 9.5579423 2.3219281 NA 9.8678579 2.6438562 14.0617614 12.7976615 8.8415643 9.8697866 9.2106713 10.0843101 3.4918531 1.3219281 NA NA 8.6662240 10.5597356 8.1098307 NA 9.2423255 7.9512847 10.0378901 5.9943534 11.1579784 4.1799091 11.2537736 0.3219281 4.7481928 9.8499622 6.1292830 NA 8.0934176 6.7142455 -0.6780719 1.3219281 14.7840149 3.2288187 11.0413169 -0.6780719 10.2235493 3.8454901 7.9366379 9.1195896 12.7604159 5.8917837 8.8898842 10.9003008 10.6816777 11.6012485 8.3359486 10.6410357 8.6483576 9.9657843 13.5447985 12.1419076 8.8376279 9.2407913 -0.6780719 8.2615073 10.2702953 10.9639798 5.8765169 8.5745935 8.7056324 6.7731392 9.3883000 6.0768156 4.6794801 9.9925843 7.0701209 5.6617781 9.1276720 8.0214314 11.6667788 10.5018372 6.1163440 10.0127991 7.3387364 2.4918531 9.3581017 10.4317587 11.5298575 10.9035995 10.1284777 8.0049227 9.1627060 9.1701128 7.1221809 1.9068906 11.1899789 7.7355560 11.3693929 9.9384769 7.3717766 15.0621041 10.7174622 10.5030804 11.4656302 11.0232346 8.9255544 -0.6780719 TCGA-BH-A18H 63 0 NA 0 breast stage ia t1b n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 7 3 2 NA 3 4 1 3 3 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6.118507e-07 1.39057e-07 10.96466374 4.60449244 7.58906384 11.59728148 -0.95009048 10.36844775 3.21983452 9.80979304 11.79683904 9.67835048 10.10654266 6.92026948 9.68017208 9.85806463 7.33067581 9.73114335 10.64469604 9.93636365 7.59293686 3.95680012 11.30817649 10.62544411 13.74974843 10.17079073 9.11060076 10.70185354 7.99534884 10.27932457 -0.95009048 1.04990952 8.43792223 10.53724248 12.44302718 5.31669244 12.12872287 13.40449866 9.55769957 2.95680012 NA 5.21983065 9.04849532 8.89539503 6.02718502 12.89803879 NA 10.74077589 12.98718676 0.04990952 9.42834070 10.70319788 3.69376571 6.90165374 -0.95009048 15.09658387 9.82880340 1.85726444 8.62165740 NA 6.16884658 10.07088490 10.29901839 9.95378671 11.16462332 9.91795575 10.00191804 3.57347148 10.05060917 10.46141591 7.06113246 7.35368586 6.12672099 11.29367396 14.69756007 8.81936259 11.00337385 10.17273289 8.70454106 1.63487202 3.13737236 6.67195710 9.11195097 11.93159246 NA 4.77782472 7.43792182 9.44007391 10.83943852 8.49284821 8.29783245 4.50933481 9.79473881 11.90808022 3.29783704 13.83525519 6.02718502 7.67926122 12.56424911 11.44302718 12.77068355 5.89539473 9.93864821 10.18561423 9.86879061 11.29901834 4.85725947 9.18945618 11.84391454 12.21166664 2.37183762 10.78461456 9.26300905 0.63487202 3.44290370 9.17273302 9.15581348 10.12337702 8.92334888 14.88380797 11.30964818 10.29664553 10.04213514 0.63487202 15.70312787 6.58128646 11.50779875 12.47630072 9.36957706 8.63110537 8.18176201 10.23864823 -0.007396 0.314730 0.493990 0.193840 0.164380 0.076934 0.229240 -0.016353 -0.016353 -0.542340 -0.542340 0.543220 0.138580 0.062548 0.000000 0.240860 0.240860 -0.111090 0.308820 0.280350 0.291760 3.656900 -0.271270 -0.263530 0.265230 -0.024860 -0.024860 2.012900 0.179890 -0.007396 -0.007396 -0.259320 0.175210 0.076934 0.076934 0.229240 0.229240 -0.016353 -0.016353 -0.016353 -0.067920 0.663560 -0.542340 -0.076205 -0.076205 0.483100 0.383790 0.062548 0.062548 0.000000 -0.271700 -0.111090 0.308820 -0.236850 -0.219780 -0.267620 -0.054481 0.241330 -0.271270 -0.263530 -0.273970 -0.024860 -0.024860 -0.257870 0.016363 -0.257630 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 1.910 1.910 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.286 0.256 0.000 0.384 0.113 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 1.910 1.910 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.286 0.256 0.000 0.384 0.113 9.49802124 11.86468763 5.42494560 8.92642172 5.98028812 11.29753576 3.37183762 NA 8.25691913 7.39863340 NA 6.43360881 0.04990952 10.42819977 9.72056115 2.37183762 9.49284841 8.92488612 9.60161314 10.79683904 9.89959151 9.19328805 10.90516276 1.85726444 8.60065185 10.00191804 6.21983065 -0.95009048 10.72542097 3.04990952 12.56560474 12.18079716 7.75034455 9.49802124 9.14530196 9.41731963 1.04990952 2.63487202 NA 3.21983452 8.16624896 9.96653083 9.83780751 4.25935535 5.48853108 6.92026948 9.95754668 5.13736826 9.75294323 NA 10.51087264 4.09429520 4.60449244 9.20302614 6.49665728 8.61214715 9.50933659 8.33530727 10.16169260 0.63487202 14.20385270 3.21983452 10.73771794 NA 7.58906384 5.02718502 7.69736308 7.82469213 13.041196 4.509335 8.644229 12.128723 10.223582 10.496988 12.898039 18.298194 9.103831 10.253865 13.532587 11.102813 9.111951 9.303752 1.371838 7.892255 11.552488 11.377458 6.509336 9.655384 8.396419 7.505232 11.000577 8.142662 9.854036 10.170791 6.657236 5.094299 3.219835 8.281942 10.428742 10.999002 7.753808 9.749477 12.138362 8.358244 9.953787 10.437384 11.088481 10.655847 11.160388 8.998272 NA 9.408369 8.176610 10.049200 10.839439 5.968768 11.955668 9.794739 7.968768 13.664040 10.553234 10.178544 13.028883 10.680627 9.675614 4.004097 TCGA-BH-A18I 53 0 NA 220 breast stage iia t1c n1a cm0 (i+) 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 5 2 5 NA NA NA 3 3 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.39057e-07 10.88208611 7.30506582 7.05850808 12.05715239 0.68059441 11.29175330 1.09558691 10.19627458 12.02339020 8.09561222 9.80899875 7.67492808 8.30628366 9.32803309 7.70479106 9.57589751 10.25043036 10.22005674 8.15224985 3.76803608 10.77465242 9.84128663 12.55196667 11.98397497 9.21260581 10.77904553 6.88024717 10.65808363 -0.90427808 6.19890074 9.31840723 12.44136398 12.62991512 7.43323406 12.24773862 13.13277308 9.89286851 4.48793005 1.09558691 6.47499082 8.75114299 9.90899269 8.78036096 12.83829010 2.48792362 9.93874818 13.65886811 5.47065074 9.68749921 10.84590053 6.92533487 7.40622542 -0.31940559 13.81111206 12.17181323 3.18307358 7.75917048 0.68059441 5.06139604 10.04762536 10.77090773 10.86421014 12.09965710 9.69970206 9.97634373 2.00248650 11.34027340 9.97289638 5.74666480 8.24027044 11.97691742 10.42119878 14.66850488 7.46804237 11.41951145 11.20902884 9.18638641 2.26552691 1.55503080 8.08713395 9.53336439 12.35071461 -0.90427808 6.81328867 7.25548374 10.57337055 11.69540888 6.43100276 7.55709144 5.64250808 10.70271130 11.82033926 NA 13.57785299 6.37173657 8.08287606 12.67592972 13.25106297 12.87183963 8.08713395 10.42960613 11.08978890 10.87221799 11.57450824 4.94110161 8.55299295 11.97873280 9.96289095 NA 10.38591912 9.83285964 0.09558691 4.08133963 9.25169543 10.89590551 10.55888119 9.29405734 14.86646968 10.17242788 10.69900680 8.25295914 2.48792362 14.86141631 8.17109121 12.80873022 11.53206356 9.41415499 9.67115146 8.06571824 9.83118102 1.4213e-02 1.4213e-02 4.1241e-02 1.0937e-02 -5.0728e-03 -8.8611e-05 0.0000e+00 2.5441e-02 -6.5395e-01 1.0978e+00 1.0696e+00 1.0715e+00 -2.5225e-01 -2.5225e-01 9.0815e-03 3.6569e+00 1.3574e+00 1.1032e-02 1.1032e-02 6.0463e-04 2.3056e-02 -3.3901e-02 -2.3125e-01 -2.3125e-01 -2.3125e-01 -2.4395e-01 -2.4395e-01 -2.3724e-01 1.8434e-02 4.9449e-02 1.4213e-02 -2.4857e-01 1.0937e-02 -8.8611e-05 -5.4388e-03 0.0000e+00 0.0000e+00 2.5441e-02 -7.1039e-01 -6.5395e-01 4.4200e-02 9.1566e-03 -1.0104e+00 -2.1669e-03 -2.1669e-03 -2.1669e-03 3.1065e-02 -2.5225e-01 -2.5225e-01 9.0815e-03 -7.1301e-01 1.1032e-02 1.1032e-02 1.1032e-02 6.0463e-04 2.3056e-02 -5.0326e-02 -6.9365e-01 -2.2190e-01 -2.3125e-01 2.8110e-02 -2.4395e-01 -2.3724e-01 1.8434e-02 1.1743e-02 -6.9745e-01 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 9.27986776 13.90117980 6.82353284 10.22199414 2.42258287 10.41782204 3.00250451 0.90296112 8.51240982 8.26428448 -1.90454812 8.97696330 2.68057191 10.03629287 9.14885939 3.55504308 9.73676078 9.79865065 10.90698692 9.77948414 9.41655942 7.81500087 11.03132978 2.26552691 9.74396981 9.97634373 4.38101336 NA 10.43963072 1.09558691 12.23763951 11.95524410 8.63670871 9.56728741 9.24789714 9.00999737 6.76094876 2.61917822 -1.90454812 9.77553209 8.45536175 8.23899555 10.00475530 4.09561222 5.53822464 6.18307556 10.17276177 7.06139604 9.54733858 0.41748800 10.66190419 4.66546668 3.95359118 9.90480560 5.87854389 6.19890074 10.11555039 8.50394218 7.52815401 -1.90454812 13.52079536 0.09558691 10.24345309 -0.31940559 8.22618288 4.11797757 8.05850808 8.54888277 15.9644313 5.1724275 8.7742125 12.2477386 10.3071964 10.0803867 12.8382901 12.7803061 10.0545274 10.9626979 12.9223593 10.3405706 9.5333644 9.0685921 -0.9042781 7.1857248 11.1695864 11.350198 6.408494 8.920571 9.167745 8.482553 10.457731 7.360055 7.468477 11.983975 7.196275 4.417542 5.673042 7.270812 11.477020 10.317199 8.374062 8.705714 13.142353 7.302626 10.864210 10.798651 10.787356 10.073608 10.548626 8.893274 NA 9.139972 8.457447 7.397108 11.695409 10.187048 10.837711 10.702711 7.464359 13.724513 10.297124 10.201521 12.883515 10.298348 9.807709 2.265527 TCGA-BH-A18J 56 1 612 NA breast stage iv t4b n2 m1 2-10-2014 female 2000 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 93.58.0 1 3 2 NA 3 2 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.251513e-06 3.337367e-07 11.28996549 -1.51663564 7.84296438 11.30797444 0.06818926 9.82473333 -0.51684205 10.16269456 12.02322146 8.74882951 9.76340527 7.37803209 9.48532639 9.41690517 7.31293740 9.58846823 11.03708380 9.69022885 6.95082065 2.06818926 9.43449917 9.82584476 13.39521500 11.06794217 8.32713538 10.56636139 3.80513765 10.53611878 -0.51684205 0.80512733 7.64560584 11.49775815 12.85322075 7.91157475 12.66576406 12.55199281 10.89154427 5.26457396 -1.51663564 6.53306336 7.57067771 11.89194232 8.25139909 13.32492628 4.63296031 10.57100883 13.66203497 8.71083054 9.56019047 11.04855465 8.29699556 5.59173925 -0.51684205 14.73415705 11.20046254 2.39011735 8.56536374 NA 3.43741419 9.86907697 10.53578256 9.53033844 10.95285632 9.80457893 9.82584476 5.83194309 11.06276616 10.28006537 4.29057185 7.28411432 6.81413124 11.24289470 14.77458311 7.27639523 11.16642849 10.52999747 10.17757240 4.06818066 3.23809897 7.58650206 9.08961970 11.02769607 0.06818926 7.08312719 7.72161942 10.86313431 11.85716719 6.17670175 4.48321601 5.34119589 10.24102119 11.82459436 0.80512733 13.13213380 5.08312825 7.34740080 12.30837208 14.00607187 12.93918383 8.85499115 10.80006170 11.13224613 10.47968802 10.72549544 5.06817636 8.97205875 12.58231572 9.54458565 -1.51663564 10.48602950 9.07753917 0.48326116 2.94658116 9.39085638 10.94852580 10.04831657 9.45547641 15.18592834 10.10937989 9.17408553 8.23140745 4.23809897 15.01678761 8.90422727 13.52067569 12.41201047 9.72698359 9.41837951 7.88835604 9.33277595 -0.49936000 2.53120000 -0.49434000 3.65690000 -0.00166290 0.92452000 0.00041593 0.00000000 0.00000000 -0.49600000 -0.49600000 0.00444110 0.00458000 0.00736090 -0.02048800 0.27206000 0.27206000 0.00360760 -0.00443120 0.00388540 0.00360760 0.01028500 -0.49788000 -0.46603000 0.06952500 0.00680440 -0.01532900 -0.01532900 0.00629870 -0.49183000 -0.51465000 -0.00968060 -0.49882000 0.00097064 -0.48544000 0.00041593 -0.00332430 0.00000000 0.00000000 -0.01312700 0.08981500 0.08912700 -0.49256000 0.00523270 0.00523270 0.00523270 0.01349200 0.00736090 1.33200000 0.00471900 -0.49152000 0.00360760 -0.00443120 -0.00443120 0.00388540 0.00889200 -0.48921000 -1.07830000 -0.49788000 -0.46603000 0.03461000 -0.50619000 -0.01532900 0.26907000 0.00541390 -0.51043000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 8.6730391 13.7358430 7.7358802 9.2703009 1.3271700 11.4554764 -1.5166356 NA 8.9609727 8.7240059 0.8051273 8.0258981 2.3901174 10.8563516 9.0831275 1.6531518 5.8319431 9.3825715 9.3566586 9.7535098 9.9074333 7.8862264 11.6859506 2.2905719 7.4775681 9.8258448 1.0681893 NA 10.1029760 1.8051273 12.3390563 13.6456452 7.5680230 10.2064488 8.8733835 9.6112089 3.7311398 1.4832096 -0.5168420 7.0339614 9.5838769 10.2551166 9.9969422 1.4832096 8.6269932 6.1485498 9.5560170 6.9670302 9.7138355 0.4832612 12.0831274 2.5706815 4.9261560 10.0561706 6.7990433 1.6531518 9.6896184 7.8883560 3.7686184 -1.5166356 13.7612283 0.8051273 10.2837100 NA 7.5357824 4.3658605 8.2873458 8.6418242 13.330233 6.284114 9.520075 12.665764 9.953365 10.223417 13.324926 11.559696 9.522524 10.920707 14.360547 8.831943 9.089620 9.200891 2.653129 7.319265 10.892871 11.58732181 7.40802737 8.17844277 9.15032611 8.17844277 10.75934478 6.22468088 6.83194309 11.06794217 6.58650206 0.06818926 7.83856546 7.53719432 11.55601707 10.13157212 7.21792378 9.77611123 10.48673247 3.52760837 9.53033844 11.07707245 11.20324497 10.36126546 10.69540692 8.18538738 7.78242233 9.24933749 8.37933504 3.43741419 11.85716719 7.98902601 11.18495417 10.24102119 6.62787236 13.38096546 9.67920191 9.71263430 12.40784149 10.68533837 9.41985255 NA TCGA-BH-A18K 46 1 2763 NA breast stage i t1 n0 m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 4 4 3 NA NA NA 1 2 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 3.337367e-07 11.1032298 6.8243160 7.7118411 10.6863331 0.5024324 9.5678038 NA 9.5771981 11.0557769 11.8139941 9.9816626 7.7312063 7.9982429 9.4839550 7.5711656 9.1507452 9.6412993 10.0017353 7.4681719 1.8243198 10.1906379 9.8850116 13.7138197 10.8411240 9.5002729 10.5559742 4.4331264 10.1910750 -0.4975676 4.4092755 8.1534396 11.2440653 12.0923898 7.4536723 12.4739312 13.1330529 9.5282193 4.4092755 -1.4977713 6.4565844 8.4896517 9.4652836 7.7215559 13.1998439 3.3097437 10.7585963 14.0507881 5.3850306 10.3665660 10.4924916 7.6030499 8.5711660 2.5023815 13.7631565 11.0595258 2.3097292 6.7644828 -1.4977713 4.3850306 9.4717742 10.5725086 10.0323061 10.5027398 9.7691742 9.5433623 1.8243198 10.9564298 10.0347435 5.1170966 7.9181292 4.7691740 10.4782356 14.3457935 7.8383140 11.0034784 10.7615424 7.4242284 2.3097292 2.9618270 8.6609974 8.6785607 11.9385786 -0.4975676 6.8107271 7.1353830 9.7831584 10.2497415 7.1462438 5.9202409 4.8947062 10.2015263 12.1016031 4.8061694 13.6327571 6.2166333 7.6109119 12.4106864 13.0963623 12.4259008 8.9064646 10.2747022 10.5600410 9.9416991 10.2886572 3.7118363 9.2821071 11.0762715 10.8047410 0.5024324 10.5251022 9.0072067 -1.4977713 3.5978887 8.9265540 11.1303774 9.6798071 9.2796428 15.2644192 9.9541138 9.4717742 8.1623838 2.0873610 15.2150355 9.0062133 13.3504726 12.0387563 10.1659457 9.5440468 8.2286056 10.1729642 -0.4269700 1.2235000 1.3822000 -0.0536830 -0.4121800 -0.0820770 0.3137700 0.3297000 -0.1231000 -0.8852300 -0.8852300 0.0802350 0.0286120 0.0350250 0.0042277 0.0042277 0.0075646 0.2100000 0.2100000 -0.4632200 0.4158800 -0.4202000 0.0063126 0.0000000 0.0000000 -0.4459400 2.0534000 1.8356000 0.4545300 -0.4440000 -0.4269700 -0.4021300 -0.0536830 -0.0800800 -0.0865900 0.3137700 0.3137700 0.3297000 -0.4670100 -0.1042800 0.2672500 0.2672500 -0.9028100 -0.1201100 -0.1201100 -0.1201100 -0.1201100 0.0350250 0.0447810 0.0042277 0.0075646 0.2100000 0.2100000 0.2100000 -0.4415100 0.3717200 -0.4202000 -0.4089900 0.0063126 0.0000000 -0.4136300 -0.4488400 -0.4056700 0.4545300 0.0145340 -0.6529100 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.414 -0.414 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.414 -0.414 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 8.73600746 13.55970251 6.81072714 10.07319202 2.05081510 11.02570455 0.50243245 -1.49777125 9.03376904 8.32734650 0.50243245 8.32454421 2.40928231 10.56713042 8.69097644 2.67231218 7.88825009 9.62909210 7.62132883 11.26289968 9.42042345 8.68850175 11.33745114 0.96443560 8.12443929 9.54336229 6.55767047 -0.49756755 10.23030811 2.40928231 13.13339412 12.04263678 8.78083697 9.67668913 8.73840171 9.51640820 3.20282516 1.30975827 0.08732705 7.93284013 8.87198499 9.55902541 9.91018654 5.04154526 7.97822252 8.17658009 10.63134860 5.83330505 9.47249346 -0.49756755 10.24890195 1.82431980 4.25727469 10.03288175 6.27743806 2.58985934 8.86542738 7.24385470 6.42720053 NA 14.02787786 1.67233482 10.32376298 NA 6.99424028 4.76917402 8.32734650 9.42571504 11.703577 7.375832 9.020057 12.473931 9.989725 12.062362 13.199844 11.354137 9.073192 10.282927 13.391369 10.298833 8.678561 10.799591 2.502382 7.341592 11.704665 10.959768 6.864331 8.910717 9.203694 8.308131 10.680330 5.087348 7.344738 10.841124 5.102301 3.750317 4.672312 7.080421 10.464561 10.011173 9.166835 8.866522 10.452944 4.978122 10.032306 10.812716 10.824034 9.915487 10.654672 8.471055 5.769174 9.698547 7.766126 4.087353 10.249741 7.851116 10.157918 10.201526 6.907529 13.738514 10.498155 10.940400 12.727068 10.426829 9.410780 2.202825 TCGA-BH-A18L 50 1 811 NA breast stage iiia t3 n1mi m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 3 1 1 NA 3 4 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 2.224912e-07 11.7002041 4.3589729 7.8620732 12.3164450 -0.7908586 10.2719487 -1.7908586 10.9277609 12.1518341 11.2157294 9.5507468 7.5557418 8.5490781 9.4211162 7.6970683 8.5345332 9.9157240 9.3916223 6.8385850 1.3791773 9.6521715 7.9987613 13.4722037 11.9191734 8.6344437 10.8063494 3.9641121 9.9341383 -0.7908586 1.2092038 6.7010805 10.0853612 12.6066352 5.9303281 13.5506078 12.8145338 6.9234737 3.1634182 1.0165676 4.2536187 8.8376737 9.8086759 4.8091417 13.3348029 1.2092038 8.6186190 13.1371448 -0.7908586 9.3992132 11.5685657 6.5266401 8.2162550 0.5311693 15.5269537 7.3538861 0.7941871 7.9774122 -1.7908586 4.5842650 9.6920359 11.0466588 9.4812745 10.2600970 9.3449372 8.9856609 -0.7908586 11.2417903 10.5362191 5.8887092 8.1950700 NA 8.9889474 14.0397927 9.1605711 11.3062724 12.2039350 6.5221107 0.5311693 3.2536263 9.3583400 9.1108492 10.5711718 -0.2057297 3.1161152 7.7010812 10.3703598 11.1238000 4.8957292 4.7327902 3.4186757 10.1764542 12.0184937 4.4380466 13.3983576 6.0547183 8.0278104 10.7310738 14.3396980 12.7372547 8.2753172 9.7090738 11.1002521 10.9528001 11.6641698 5.3177527 8.0452780 11.6781065 11.5961682 3.9096675 10.3757049 10.6164957 2.1161318 1.3807294 9.2049951 9.6302407 9.7105676 10.1161186 15.4115910 10.8028525 11.5521360 7.9079326 0.7941871 14.7662877 4.7790811 11.1706776 10.0393469 9.6180885 8.8276136 8.2833695 10.9892099 0.423680 1.412200 1.395900 -0.276970 -0.294360 0.197180 0.620870 0.970080 -0.767570 -0.790090 -0.790090 3.656900 0.164150 0.164150 -0.174740 3.421900 -0.769280 0.158610 0.158610 -0.300980 0.189680 -0.261790 -0.751760 1.066900 1.066900 -0.603530 0.205580 0.224990 1.071200 -0.205730 -0.266120 -0.052531 -0.244840 0.197180 0.184340 0.620870 0.646710 0.970080 -0.767570 -0.772620 0.394630 -0.458320 -0.790090 -0.778780 -0.768170 -0.022469 0.000000 0.164150 0.164150 -0.174740 -0.777950 0.158610 0.158610 0.122220 -0.300980 0.189680 -0.261790 -0.741160 -0.751760 1.066900 0.360350 -0.583820 0.224990 -0.017391 -0.162050 -0.738710 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.378 0.206 -0.243 1.152 0.000 0.979 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.378 0.206 -0.243 1.152 0.000 0.979 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 6.7249272 10.0294069 5.6521710 8.2176568 1.5311693 9.8638640 -1.7908586 NA 8.4500194 5.8385837 -1.7908586 6.5579997 0.2092662 10.8044854 8.6047623 3.5667786 5.7561213 9.3059432 8.5255095 11.6499674 9.7315349 7.9490084 10.2783420 1.9096579 8.6469802 8.9856609 2.0165676 -0.2057297 11.5905005 -0.2057297 11.4362422 12.0458701 6.7249272 9.4380466 10.1670555 9.5618231 5.5221123 1.6686638 -0.2057297 4.6015480 7.5777347 8.7454753 10.3810302 3.6686638 7.3815308 7.6015457 9.7700385 6.8276133 10.4398489 NA 9.3013245 2.7941871 2.7941871 8.7466504 3.4514485 2.7327902 8.2049951 7.5842673 4.2315937 -1.7908586 13.2992577 -0.7908586 10.4562654 NA 7.3866472 5.0294087 8.0133590 8.0964485 13.963439 5.601545 8.499247 13.550608 9.955835 10.987305 13.334803 14.145751 8.761897 11.008712 12.989050 12.446214 9.110849 8.820253 2.732790 8.246775 11.426731 10.9352332 8.9105345 8.3268712 9.7604555 10.3359324 10.5670301 5.2645102 9.0726399 11.9191734 5.1634263 0.5311693 5.9707800 8.1059389 8.6604392 9.0181921 9.5640283 9.0333911 11.9479536 3.1161152 9.4812745 10.3975077 11.9034770 9.1850759 11.0549140 9.0206028 0.2092662 8.8110545 5.9723067 5.1280913 11.1238000 0.2092662 10.7940049 10.1764542 7.9542638 13.0790627 10.3519732 9.4283964 12.8248576 9.1750123 10.1085848 0.2092662 TCGA-BH-A18M 39 1 2207 NA breast stage iiia t3 n1 m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 93.58.0 5 2 2 NA 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 2.781139e-08 10.9271273 9.1134992 7.7572026 10.9498092 1.5550799 10.6619686 NA 10.6315601 12.0538031 11.9463221 9.9153770 7.7522950 8.9224934 9.0845092 7.2097146 9.2838493 10.4277534 9.5600013 7.7910925 2.9474043 10.0047431 10.0727479 12.7826193 11.2090432 10.0742234 10.5402089 5.5092746 9.5967377 -1.4449692 0.1399933 9.1134992 12.7132148 13.0252697 7.8611403 12.3957581 12.1380438 10.1807874 7.8242052 5.2132890 6.4798918 8.3863859 8.4146134 8.2398271 12.5517286 4.8404783 10.4544354 13.4292434 5.8312034 9.8562489 10.7489119 8.2221902 5.2693249 NA 14.0249273 9.7718244 3.5994725 7.6398869 -1.4449692 4.7048277 10.0791305 10.2301535 10.4087780 11.4587722 9.8915851 9.8673943 2.7249994 11.6775830 10.2101620 6.8404809 8.2132899 2.4619738 11.3887593 14.8314938 8.5395396 12.0407821 11.0893814 8.0766788 1.5550799 3.7249994 9.2007370 9.3388952 13.0786405 -0.4449692 4.8030048 7.2931709 10.2070271 11.5305683 7.6238566 5.9559590 5.0628729 10.4772913 12.0228114 2.5550799 13.6025433 5.6318929 7.2658850 12.2529149 12.3939870 12.8609266 8.2693240 10.3446122 10.8940934 10.7210659 11.3942823 5.4619705 8.4961260 11.7728848 11.0050010 -1.4449692 10.4388673 8.9570245 0.1399933 3.1424461 9.4821158 11.4821157 9.4657213 9.4521677 14.7324008 10.0869473 9.6850054 8.8427909 3.4619738 14.9124759 9.9093279 14.1659592 11.9233121 10.3836117 9.7073634 8.6830729 9.9450379 0.00047226 0.00047226 0.89685000 -0.00555840 -0.00555840 -0.01337800 0.45936000 -0.00445220 -0.00445220 -0.00942550 -0.00942550 0.91399000 0.00081095 -0.00024047 0.44931000 0.45408000 0.45408000 0.00289230 0.00289230 -0.00694040 0.00000000 -0.00159380 0.03211900 0.03211900 0.03211900 0.02340500 0.00254070 0.02930400 0.01012400 0.02256300 0.00047226 -0.00174150 -0.00555840 -0.00376040 -0.01337800 0.45936000 0.45936000 -0.00445220 -0.00445220 -0.00445220 -0.00057543 -0.01097200 -0.00942550 0.00358660 0.00358660 0.00358660 0.00358660 -0.00024047 -0.00024047 0.44931000 -0.46740000 0.00289230 0.00289230 0.00289230 -0.01490900 0.00000000 0.01207600 -0.45427000 0.03211900 0.03211900 0.00137200 0.02340500 0.02930400 0.01012400 -0.00275580 -0.32776000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2442030 13.6355214 7.3974291 10.0282770 3.5823151 10.5030806 2.0144981 1.1400588 8.4269838 9.0237025 -0.4449692 8.6980406 3.9473950 10.4173285 9.2787396 3.0145160 9.4717045 9.1296720 9.0598976 10.1944193 9.4684167 7.9148282 10.7365415 3.1400424 8.8159980 9.8673943 4.1096698 -1.4449692 10.2336786 3.7645266 12.2460587 12.1366322 8.2221902 9.8865553 10.3388953 9.3551696 4.7048277 0.5550308 1.7249994 3.6843587 8.6130704 9.2319172 9.2485654 5.8404809 7.1249340 5.4858164 10.2415791 5.3364369 9.2266196 -0.4449692 10.8468249 3.3624278 4.6843643 9.7053336 6.6286847 4.6843643 10.3899446 8.1419181 6.4619689 NA 13.6849250 0.5550308 10.1730051 NA 7.8927007 5.4498948 7.8265415 8.7300044 13.0236447 5.9038071 8.7174698 12.3957581 10.3704618 11.2358776 12.5517286 12.0587801 10.0803693 11.1969045 13.0252925 11.1103867 9.3388952 9.3437969 0.8770375 7.5121803 11.1130208 11.4739418 7.3816269 8.9844854 9.1125422 8.7826946 10.5351360 6.6049268 8.8206937 11.2090432 5.3364369 3.4619738 4.7250049 7.0248427 11.6684951 10.2498717 9.1277787 9.1220838 12.8155571 5.9038071 10.4087780 10.3946761 11.2940152 10.0820668 10.7832960 8.9548904 0.8770375 8.9389341 7.8870482 6.2345588 11.5305683 7.8882337 10.5059989 10.4772913 7.7399541 13.8632035 10.3356184 9.8859954 13.0225567 10.6517937 9.4566998 1.5550799 TCGA-BH-A18N 88 1 1148 NA breast stage iia t2 n1b m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 93.58.0 3 5 1 NA 2 1 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.112456e-07 11.3202175 2.7049162 6.5013930 11.8367836 -0.5430887 10.8503896 2.0419789 10.4271050 11.6569781 10.1895906 10.0216251 7.2578988 9.0447766 9.2102159 8.0717090 8.6431134 10.4396362 9.0381997 6.8832640 -1.5428785 10.9830093 9.1161030 13.4492737 10.7641999 8.8287756 10.6694955 1.7789234 10.6108519 0.4570164 1.0419438 7.1780981 10.2412250 12.9067526 8.5444618 13.0263207 13.0932272 9.1993087 3.7789234 2.1574318 7.3668922 8.5901413 10.3126463 7.9548512 13.0055200 3.6269297 9.7208551 13.5359421 3.1008599 10.1576295 11.3576773 4.1849229 5.3024909 NA 13.0292558 11.6061318 0.4570164 8.3165341 -1.5428785 5.1849190 9.6828091 10.3597511 12.0499233 12.0391411 9.7951784 9.6888203 0.7789655 11.2264238 10.3196364 7.0154195 7.6882202 NA 11.9434571 14.3545374 7.7621262 12.4960038 11.3978633 9.3646409 -1.5428785 5.8057284 8.0287520 9.4591109 12.7275135 -0.5430887 6.1008557 7.5707415 10.7164482 10.9187343 4.5444607 4.9327321 3.4570032 10.4332053 11.8234580 1.4570164 13.4392797 6.4513529 7.9286741 11.7510454 12.0405521 12.8572782 8.1469973 10.0698677 11.0091879 10.8773200 11.3436483 5.4793664 8.8090427 11.4355308 13.0465918 1.6269063 10.8172976 9.4513525 NA 2.9905556 9.3134245 11.1062553 10.6867192 9.0918101 14.6395875 10.6508325 10.5274555 8.3056222 2.1574318 15.8139668 8.7120276 11.9882587 10.7789272 9.6080156 9.4053664 8.2962027 9.8848253 -0.0273730 -0.0286030 -0.0362200 0.4641700 0.4641700 0.4610700 0.9936400 -0.0253740 -0.0503700 -1.1169000 -1.0470000 1.5441000 -0.0217840 -0.0217840 -0.0346650 -0.0223320 -0.0310590 0.4723800 0.4678300 0.4513900 -0.0294480 0.5022100 0.5166400 0.5015100 0.5015100 0.4970100 0.4970100 0.5135000 0.5199600 0.0000000 -0.0273730 0.0179630 0.4641700 0.4975300 0.4509500 0.9746800 0.9746800 -0.0209610 -0.0503700 -0.0368100 -0.0318320 -0.0239770 -1.1376000 -0.0419740 -0.0419740 -0.0206870 -0.0206870 -0.0217840 -0.0217840 -0.0150540 -0.0310590 0.4723800 0.4678300 0.5106800 0.4367100 -0.0294480 0.4977000 -0.5750600 0.5166400 0.5015100 0.4745600 0.4970100 0.4970100 0.5104200 -0.0476660 -0.0069195 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.510 0.510 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.522 0.000 0.000 0.228 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.510 0.510 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.522 0.000 0.000 0.228 7.57334271 12.51092502 6.83637737 9.90975511 2.90458043 10.13251515 -0.54308874 NA 8.13999381 8.41989531 -1.54287854 6.71909443 6.32736401 10.14524947 9.48973358 2.45699009 4.64682508 9.31575731 5.35181558 10.24204283 10.55683345 7.96281042 11.78033541 3.50138819 10.90743714 9.68882028 2.70491622 NA 11.08908556 2.91643843 12.72004819 11.81317593 8.28672177 10.42602579 8.00196377 9.35333145 2.98055547 1.91643843 0.45701636 1.26435627 10.03301106 9.98642971 9.58821298 1.91643843 7.61868502 6.51228220 10.64867530 8.14524947 9.70255175 0.04194383 10.91924577 0.04194383 6.34574232 9.14925708 5.08519093 -1.54287854 9.81949096 6.89994295 4.88326401 0.04194383 13.69626200 0.45701636 10.26596331 0.77896548 8.92562327 5.52308830 7.80793832 8.78230470 13.827444 4.238359 8.872741 13.026321 10.465077 10.039612 13.005520 12.934504 8.853604 11.031120 12.164897 9.802959 9.459111 7.721442 -1.542879 7.495918 11.197412 10.7873558 8.4328471 8.1900143 9.1530972 9.0029289 10.4053116 6.2962023 4.3638929 10.7641999 5.8663912 1.9164384 8.8610764 6.8129230 10.1840686 9.3064042 9.8589453 8.8832640 12.5065924 1.0419438 12.0499233 10.0087073 12.9040178 9.6779819 10.3165340 9.2251833 NA 9.1554867 5.5862814 1.4570164 10.9187343 6.6219053 10.5720428 10.4332053 6.8276869 13.2842907 9.9508546 10.0596980 11.9248594 9.6615702 9.7923895 -0.5430887 TCGA-BH-A18P 60 1 921 NA breast stage i t1 n0 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 white NA 93.58.0 6 3 2 NA 1 4 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 6 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 4 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.597173e-06 2.532391e-06 11.0400490 4.9082557 6.6953605 10.8177820 -1.4492963 10.7259404 0.1356662 10.7537448 12.0502995 7.7747047 10.0465578 7.9894944 9.6321862 9.8630185 7.1281315 9.1809698 10.7442281 9.7998162 6.6059847 5.0898625 9.8544835 10.0791569 10.4695660 11.3414585 8.9473076 10.7200015 4.8726318 10.5304852 NA 0.1356662 8.5964622 11.5836094 12.1251780 6.5675105 13.5183793 14.1187776 8.5786089 6.1431607 4.8905537 4.8544844 8.2955366 8.8916655 7.0584973 13.7814363 -0.4492963 10.3576550 13.3224501 8.6670466 8.8233325 10.8224575 7.4086838 6.3451178 NA 14.3068932 10.9967522 2.5507037 9.1836979 NA 4.3835937 10.5117907 10.7747045 9.6507080 10.4493042 11.1148523 9.8765704 -1.4492963 12.2666647 10.3479590 6.8771320 8.7093124 0.8726318 10.3221923 15.1531407 8.5743464 11.7278108 11.6860914 7.7771152 0.1356662 5.5507037 9.6979078 9.2615092 10.9510485 -0.4492963 5.3320634 6.9685551 9.7274992 11.2917484 5.6381665 6.2649492 4.3580586 11.0139717 12.1974864 2.4575943 13.0953050 5.0101353 7.3089260 11.1501507 13.3103829 13.2942224 8.6341819 10.8513413 11.2106987 10.8501255 11.3899066 5.2921707 8.6167918 12.0006252 11.9300811 -0.4492963 10.1062506 9.4249158 0.1356662 2.8279409 10.3287799 10.6285199 11.1117520 9.1138989 15.0267528 9.7023537 10.0410522 8.5464701 -1.4492963 15.9633222 10.6365072 13.5536057 11.8138252 10.3989344 9.5244001 8.7491477 10.7347227 -0.34549000 0.97874000 0.97874000 0.01153900 -0.00456950 -0.00636680 0.00000000 0.00208190 -0.00774820 0.00110930 0.00110930 0.00110930 0.01263000 0.01544700 0.01614600 0.08666600 0.70907000 -0.05791300 -0.07227400 -0.00166290 0.01433000 0.02216400 -0.33364000 0.33399000 -0.34125000 0.01894300 0.01894300 0.01894300 0.03693500 -0.34549000 -0.34549000 0.00124810 -0.75952000 -0.00636680 -0.00636680 0.00000000 0.00000000 0.00235810 -0.00774820 -0.00774820 0.00055459 0.00194180 0.00110930 0.01131000 0.01131000 0.01530800 0.04018500 0.01544700 0.01544700 0.01614600 -0.73888000 -0.05791300 -0.04129500 -0.04129500 -0.00166290 0.01433000 0.02216400 -0.72923000 -0.33364000 -0.34125000 -0.00622860 0.01894300 0.01894300 0.03693500 0.00124340 0.05651300 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8748830 13.4976090 9.2887950 9.9946822 3.0101353 12.1347257 2.8726318 NA 8.4363992 7.4575935 NA 8.4432150 1.3580586 10.7543567 9.3820101 -0.4492963 7.6696441 10.1028915 12.9249951 8.7392915 10.0346394 7.9060536 10.6738542 0.5507037 7.0425557 9.8765704 2.2511434 NA 10.0410522 3.7206287 11.5594815 11.5976562 7.8407219 10.0425558 7.8726306 9.3263131 6.8544832 0.8726318 NA 4.8544844 8.2528754 8.6825596 11.2037718 3.6381665 8.4843198 5.5507037 10.2297429 6.3580569 9.2231281 -0.4492963 8.5882495 3.6799867 3.5507037 9.9424243 4.3456377 2.7206287 9.8221658 7.3644840 8.6447803 0.1356662 14.0239329 -1.4492963 9.8192447 NA 7.2786232 3.0101353 8.5322702 8.9967523 13.177610 6.863585 8.526551 13.518379 10.475515 11.059240 13.781436 8.327136 9.930623 10.293433 13.571943 7.408684 9.261509 9.213371 1.358059 7.212481 11.954647 12.1349607 7.2511425 8.6902540 9.0495521 9.1309612 11.1518978 6.4515689 6.5450556 11.3414585 5.5164880 1.3580586 10.2584932 7.3336679 12.6696438 10.4680749 7.1836979 8.4665823 11.8319083 5.4695669 9.6507080 10.0515446 11.8788167 9.9962349 11.0493027 8.7903012 11.4036223 8.7294797 9.8789963 4.3580586 11.2917484 7.4241470 10.7777170 11.0139717 7.6248444 13.4783419 9.6348468 9.5528145 12.9722417 11.0392961 9.7956611 0.5507037 TCGA-BH-A18Q 56 1 1692 NA breast stage iib t2 n1b m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 93.58.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.838585e-06 6.591155e-07 12.7188543 7.3381837 7.8214507 11.6751399 -0.2392255 10.5256263 -0.2392255 10.4476929 11.7993308 10.4719915 9.9143068 7.6646364 8.7366028 9.6403380 7.2283598 8.6706478 9.3153436 10.9650202 9.3447777 5.6433973 10.4149432 11.4683296 13.4181290 11.1303521 10.4189662 10.9394196 5.9306806 11.4129275 1.0827026 2.4611880 8.1530722 13.7075240 13.5566929 7.4681141 11.9714261 13.1917952 9.6548147 7.2119661 3.7607532 8.1072683 9.7054669 10.5555767 8.3754648 8.8705854 1.9560938 12.3246660 9.8660085 8.1248895 8.9810726 11.6572764 8.1786071 6.6433973 1.7607745 15.1151274 12.7901282 2.5681051 8.6171802 0.3457370 4.4046102 10.3391275 10.4113577 9.1347074 10.7793027 10.6268745 10.5185614 7.2445703 10.4629275 11.1216018 5.5022224 8.1444589 6.4331798 11.6538666 15.8219677 8.7471658 11.0693782 10.8893935 9.1237945 0.7607745 -0.2392255 9.1891149 9.7287015 11.5486573 -1.2392255 2.6676424 5.8796960 11.7702335 10.7512133 4.3754635 9.1552175 4.2526049 8.8442340 12.3472427 0.3457370 13.2087419 5.2036984 6.8268434 11.8260026 12.5579096 12.8173078 6.0368791 11.4717764 11.7100343 11.4866428 11.6428246 4.8482173 8.2016241 12.3274034 9.1072683 NA 9.7171309 9.3991905 2.4611880 3.8945656 10.4754296 9.0983767 10.9256617 8.4681137 14.6422272 10.6567086 9.6781269 8.6736440 5.5936436 12.9240899 8.7061986 12.6634125 11.2086128 9.9985622 9.8268440 7.8322172 10.3862490 0.01558700 0.47547000 1.38160000 0.05067700 0.94612000 -0.52287000 0.02584500 -0.00512270 1.00090000 0.00000000 0.00000000 1.06180000 0.45564000 0.01405100 -0.50764000 -0.00072487 -0.00072487 1.38230000 -0.03420000 0.53995000 -0.50004000 0.02595200 -0.54310000 -0.54310000 0.42637000 0.33950000 0.36751000 0.30825000 0.46092000 -0.56316000 0.01558700 -0.70541000 -0.52173000 -0.58439000 -0.49986000 0.04089200 0.03129500 0.47375000 0.52450000 -0.06168900 -0.03299600 -0.47099000 -0.03735400 0.49372000 0.49372000 -0.50805000 -0.51434000 0.01405100 -0.49882000 -0.50764000 -0.00072487 0.01474900 -0.01862800 -0.01862800 -1.29290000 -0.50069000 -1.00080000 0.43108000 -0.54310000 -0.54310000 -0.56445000 -0.12174000 0.34164000 0.46092000 0.42536000 0.44732000 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.474 -0.474 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.474 -0.474 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 8.3229971 12.2206986 4.2526049 8.9714260 4.9551175 12.0626796 1.5681294 3.8900380 7.9003059 9.6586001 NA 8.6072012 8.4715610 9.9437697 9.7845091 2.4611880 8.3325074 11.1940794 7.9105018 10.1056054 8.9427640 8.2705299 11.4263127 2.2201752 9.6601116 10.5185614 3.2843216 NA 9.9262899 3.4611880 13.0031846 12.9654787 7.7607545 11.0507736 10.8922902 9.4929221 5.2036984 1.5681294 -0.2392255 2.4611880 9.4758586 9.0074952 7.0553757 11.2385130 9.9549945 6.2445712 10.1817676 9.6601116 11.0685248 1.5681294 13.5371878 2.4611880 5.6555722 8.9906310 5.6041099 4.5421156 9.5888911 8.6140642 6.9555116 1.5681294 13.8941779 1.3457370 11.0415255 0.3457370 7.3381837 5.6555722 8.0916718 7.6433981 10.523540 8.137965 7.794178 11.971426 10.820667 11.278424 8.870585 12.006901 9.195383 11.847720 13.054801 12.280637 9.728701 8.311501 1.082703 8.364381 10.677381 10.404611 6.714952 8.418966 9.407313 8.848218 9.678022 6.720757 5.542116 11.130352 10.434947 1.930662 10.005713 9.843030 13.313424 11.036588 8.515642 8.248595 10.641486 6.161634 9.134707 9.938797 12.116794 10.899666 10.489526 9.459459 0.345737 9.531782 9.428390 8.799674 10.751213 6.950579 11.014307 8.844234 7.832217 14.259323 9.734452 10.445942 12.857058 10.659734 9.547024 1.082703 TCGA-BH-A18R 50 1 1142 NA breast stage iia t2b n1 m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 10 white not hispanic or latino 93.58.0 3 3 1 NA 1 5 2 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 1.946798e-07 13.0579555 7.3447903 6.6417108 10.9400463 -1.7504940 10.4637126 NA 10.4670483 11.4786630 9.9904391 10.3696314 7.9841034 9.4515173 9.7215765 5.4685605 9.9125068 9.6980260 10.0763392 6.8381084 4.7088273 9.2423319 10.7926670 14.7536073 11.0090736 9.9441867 11.1895235 5.2493922 9.9891741 NA 1.2493847 7.8860178 11.9521073 12.8957835 5.9975860 15.3974529 13.1852492 8.6798460 5.4092653 2.3368546 6.5713219 9.6540030 7.6524055 7.5138357 12.5025023 -0.7504940 8.9463610 13.8398051 4.8343573 9.2786808 11.2054066 8.9209346 4.4588479 1.7088052 12.7975260 8.2550182 3.7729519 9.0543311 1.2493847 3.8641069 10.5738553 10.7241135 10.5226063 10.6879254 10.6814133 9.5020588 2.5713128 11.7725879 10.2391427 4.8932506 6.7571886 1.0567222 10.9775266 14.5308527 8.3070332 11.7528466 14.3217355 8.4758056 1.5713370 2.8343472 7.9908607 9.2338119 11.3169959 NA 4.4193164 7.7352229 10.5330606 11.2651570 7.2745328 6.0042812 4.8192492 10.7215766 12.2480721 7.6798460 14.0984809 5.0438082 7.2465734 11.0221205 10.6395625 12.8466313 7.1197587 10.5345067 11.0731587 10.4368198 11.0942954 5.2937861 9.9209346 11.4761067 11.2734943 -0.7504940 9.6486714 8.9959079 -0.1656933 3.1956626 9.6887049 11.0480678 10.1760602 8.4255667 15.2073797 11.3404982 9.1897072 8.5791900 2.0567569 14.5017263 9.1104804 12.2515053 11.2394975 10.6322877 8.7352229 8.1089285 10.3669944 -0.00539920 0.46519000 1.52050000 0.49701000 -0.02616700 -0.00585450 0.00000000 -0.02548300 -0.53591000 0.00374650 0.00374650 0.98183000 -0.00678130 0.50342000 0.01084200 3.65690000 3.65690000 0.53432000 0.48492000 0.00027728 0.01782400 0.00374650 0.00013863 3.65690000 3.65690000 -0.02137300 -0.02137300 -0.03190500 0.53661000 -0.53256000 -0.00539920 -0.00207840 -0.52522000 0.03735900 -0.53774000 -0.00609040 -0.01147300 -0.00152430 -0.00885260 -1.11130000 -0.00235530 -0.01366000 -0.01188700 0.00332990 -0.01174900 -0.00013862 -0.00013862 0.50342000 0.01796300 0.01084200 -0.53632000 0.49009000 0.48406000 0.48406000 0.00027728 -0.00664320 0.00736090 0.02791900 0.00013863 -0.54693000 0.00972760 -0.02137300 -0.03190500 -0.53144000 0.01167900 0.01796300 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5690657 12.0904664 6.3889455 9.5026500 4.6244343 10.9728411 3.2937825 0.2493847 8.9350183 8.2238082 -1.7504940 8.5790330 1.2493847 11.0274706 9.5120755 3.4973186 8.4782122 8.8567237 7.7412465 9.7367312 9.4271743 7.7230991 9.2641113 1.5713370 7.4637124 9.5020588 2.2493847 0.5713370 11.6081820 3.0042856 12.2878839 11.6919483 7.4685621 9.7417474 9.0429969 9.7880674 5.6672450 3.0042856 0.5713370 0.5713370 9.5696299 7.7149598 11.2625417 4.4973186 7.7686958 6.3154829 10.7766261 5.6244343 10.3892646 NA 10.0779267 2.1562995 3.2937825 9.4299864 4.0456264 5.5161791 8.0775298 7.7962882 11.5450189 -1.7504940 14.2423540 NA 11.6074952 NA 8.6829788 5.0948821 7.7749142 8.5196889 13.841572 8.973907 8.617900 15.397453 10.501763 11.501911 12.502502 9.714960 11.597772 11.274706 13.153322 12.100947 9.233812 7.972201 5.004281 11.912507 12.450599 11.185479 10.379964 8.745248 9.278681 8.576946 10.667344 6.357918 7.104262 11.009074 6.516181 1.056722 5.562276 9.107071 11.284021 10.193739 9.011775 8.605845 10.127444 7.229533 10.522606 10.067177 8.811636 9.933704 10.716235 8.927113 4.082285 8.380376 7.638207 6.761146 11.265157 6.191908 10.904316 10.721577 8.427025 14.131511 10.049080 10.063175 11.294641 10.357591 9.724620 2.156300 TCGA-BH-A18S 79 1 2009 NA breast stage i t1c n0 m0 2-10-2014 female 2003 NA NA mucinous carcinoma yes 0 white not hispanic or latino 93.58.0 5 5 1 NA 2 4 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 11.8243435 1.9705224 6.1799668 10.8683596 NA 10.5031948 NA 9.8139118 11.9558817 8.7007012 10.0781671 7.8347005 9.5129012 8.6143705 8.7254017 9.5858372 10.8495868 9.8154814 6.6663220 -0.0294408 9.2818841 9.8300490 14.5819809 11.3829076 10.0575349 11.0339092 3.1929043 10.7320432 NA 2.8449882 6.6382172 11.7926866 12.5628154 7.7778688 13.6401374 13.2133409 10.2069270 7.7496864 5.5148355 7.1701865 8.2788532 9.8222631 6.0076037 13.8782498 1.7074806 10.9873224 14.3396116 6.5199774 8.9733291 10.9537453 8.4009665 10.0794741 0.3855967 13.4381689 8.7938813 3.0293999 8.5504586 NA 3.5554726 10.0025599 10.4172528 9.2954448 11.3273329 9.4550014 9.4908054 NA 11.4459098 9.6640012 6.3742362 8.5529699 8.6251503 12.1751871 14.2293500 6.6148997 10.9307574 11.3594283 7.5479433 0.3855967 3.8118204 8.2435325 8.9285835 9.9061703 -1.6144033 4.6523373 7.2528300 8.5790772 11.1206845 5.1134713 4.6143683 4.5950023 9.9251951 11.7433785 -0.0294408 13.2938035 7.5352987 7.5729041 11.5041683 11.3300807 12.9507727 8.2528305 10.4357404 10.8663418 10.9519792 10.6645818 5.1669122 8.1387684 12.0636015 10.4289207 -1.6144033 10.0226293 9.1750852 2.1929201 2.1960089 9.6137690 9.3148100 9.1628070 8.3981763 15.3396002 10.5769194 9.9535077 7.9324463 4.0579787 16.5474757 9.3118475 12.3501632 12.2985345 10.0089759 8.9733291 8.3799051 11.2012511 1.05380000 1.52810000 1.71360000 0.01467900 0.01945100 0.04747600 0.02244400 -0.00263220 -0.90542000 0.61281000 0.61281000 -0.38817000 -0.00567570 -0.00843850 -0.00911700 -0.00911700 0.03143600 0.00000000 0.00000000 -1.03870000 0.00374650 -0.03463000 0.68887000 0.72093000 0.72093000 -0.10592000 -0.10592000 -0.10592000 -0.04549900 -0.08910600 -0.00069303 -0.00899060 0.01467900 0.02440800 0.06265100 0.02244400 0.02244400 -0.00263220 -0.93037000 -0.94078000 -0.06279300 0.00221910 -0.37696000 -0.88411000 0.02651400 -0.00774820 -0.10039000 -0.00843850 0.00958830 -0.00911700 -0.01725400 0.00000000 0.00000000 0.00000000 -0.90404000 0.00374650 -0.03013100 -0.04387300 -0.89748000 0.72093000 0.01726400 -0.10592000 -0.10592000 -0.04549900 0.03453600 -0.08333300 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 7.4650366 11.4153565 4.1669082 8.9391810 1.3855415 10.5022205 NA NA 8.5186937 7.4051423 NA 5.7543210 NA 10.3664053 9.5573540 1.5554726 5.4730141 9.1603386 11.5584479 11.1160218 10.1835535 7.8551937 10.1450237 3.8064375 10.6420552 9.4908054 -0.0294408 -1.6144033 10.6299155 2.9091202 12.9352761 12.6314014 6.7164683 9.7453012 7.2497373 9.1628070 1.1928885 2.4730076 NA 4.3397503 9.1595149 10.0517756 10.9749687 0.7074364 7.5545996 7.3995719 9.9477941 7.0929104 10.1965248 NA 13.2209606 1.1928885 10.3692578 9.8452394 5.8416184 1.8449882 7.9928817 7.3570954 5.0997959 -1.6144033 13.8130936 -1.6144033 10.8893773 NA 9.1177189 4.8449831 7.9516059 10.2156707 13.9604091 3.5950023 9.2200227 13.6401374 9.6916076 11.6684952 13.8782498 12.2165619 9.3876635 10.7800143 13.0851783 10.1117697 8.9285835 7.3685449 -0.0294408 7.9110726 11.9102158 10.3010576 8.1437750 8.8592574 8.9845347 8.6709540 9.8070643 5.6047207 8.7681757 11.3829076 6.4079186 -0.6144033 8.3221896 6.1680904 11.7008427 10.2605330 8.9752028 8.7981215 12.6127163 3.7074806 9.2954448 10.5744495 10.7301249 8.6836144 10.4330164 9.2697221 -1.6144033 9.0945578 9.2786028 3.6334777 11.1206845 5.5454217 10.6260448 9.9251951 7.1168710 13.7855972 10.4065316 9.8107675 13.1883204 9.4908054 8.8774047 1.1928885 TCGA-BH-A18T 70 1 224 NA breast stage iia t2 n0 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 93.58.0 6 3 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.838585e-06 5.550446e-07 11.8540511 4.2819801 6.1544273 10.5713583 NA 8.5240527 -1.7403358 9.7797374 11.4205843 10.0515868 9.3869594 7.9875306 8.1649969 10.0380977 9.9729964 10.3077561 9.5403807 10.1372774 8.8208979 4.7025523 10.3779021 10.7539655 13.1463067 10.1411063 10.3179400 10.5461676 5.0669632 11.1317057 NA 1.2596039 7.0861585 10.9151407 12.5424985 7.9617825 12.5110923 12.6780555 7.6454725 6.1844231 3.3470703 5.6346484 9.1199210 8.2225061 9.5927652 4.5263944 -1.7403358 9.6433142 10.4962221 10.2902771 8.5982796 11.5628199 5.4395201 5.3576435 1.5815441 12.9762815 8.3628977 1.2596039 9.0211613 -1.7403358 4.4690654 9.0061244 11.6604893 9.5217047 10.1097967 9.4944274 9.3530275 -0.1553733 10.8396329 9.7489561 2.8445664 8.1468303 0.2596642 7.4836119 14.4684158 7.0587949 11.0913130 11.6682050 10.0893326 NA NA 9.4519028 9.5616776 10.2397495 NA 3.5075410 8.2680385 10.6666120 10.6398004 3.1665066 5.8962355 6.3785515 10.7826817 12.1522476 2.7831633 13.0259835 3.0669675 6.9600494 11.5754671 12.5463121 13.2464741 6.2079768 10.5507806 12.1892382 11.7465543 11.1005845 5.5054464 8.8016744 12.5595334 7.9016616 -0.7403358 10.3074154 9.3283882 -0.1553733 3.5158638 9.3142143 12.1750225 10.4562120 10.1117493 14.8390290 10.8270907 10.1521527 7.3707458 0.8445463 11.0194981 2.9034625 12.0933895 11.5622488 9.8613807 9.1074501 8.5770224 10.8352626 -0.083465 1.519300 1.111700 0.427550 0.393130 -0.056577 0.388680 0.303620 -0.567530 -0.575550 1.267100 2.777000 1.281700 0.955700 -0.558170 2.109900 2.109900 3.656900 0.014749 -0.213580 -0.553270 -0.252010 -0.544750 -0.036946 -0.059269 0.303990 3.270700 -0.531650 0.416300 -0.516090 -0.107620 0.187370 -0.536120 -0.581860 -0.570410 -0.577530 -0.568230 -0.708270 -0.567530 0.004580 0.122850 -0.592730 -1.292900 -0.272960 -0.276410 -0.464080 -0.476810 -0.551860 -0.561470 -0.515370 0.521060 0.312090 0.014749 0.016705 -0.187480 -0.562060 -0.544010 -0.527880 -0.544750 -0.036946 1.448600 0.323980 -0.531650 -0.613830 -0.030404 -0.558670 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.304 0.304 -0.108 1.004 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.304 0.304 -0.108 1.004 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 6.9977023 12.4737772 5.6942395 8.9661060 1.2596039 11.8927186 0.2596642 -1.7403358 9.5146385 6.9565771 4.5450108 9.8247120 1.7190520 11.0385084 9.8016744 NA 7.4093570 11.3070747 4.9738546 9.2232285 9.0383360 6.8743199 11.6326109 1.9600668 9.5944418 9.3530275 1.5815441 NA 9.8743198 2.3470703 13.6511556 12.8879415 6.5263959 10.2235897 7.7713627 9.0128268 0.2596642 3.4295356 -0.1553733 -0.1553733 8.5263963 9.1836800 5.6083391 2.5815441 9.3944790 5.9320352 9.5809744 5.3256994 10.3791995 3.5075410 12.5954189 3.5450170 3.5075410 10.4220673 6.4992081 2.9034625 7.5633908 7.4345357 5.0409713 0.2596642 14.1418708 -1.7403358 10.5042711 NA 10.2170747 1.9600668 7.9196059 6.5542312 13.735407 11.765669 8.202124 12.511092 9.880288 11.648569 4.526394 7.599460 10.796343 11.414586 13.116181 12.478022 9.561678 8.763436 2.429536 7.883491 10.799738 10.7839068 3.6171574 8.5905268 9.9858281 9.7674045 10.6112974 5.3681328 3.1665066 10.1411063 9.9552733 1.0669502 9.1739951 8.3930090 13.3190389 10.9023386 5.5724926 7.3230052 10.1665006 4.5994606 9.5217047 9.6827259 11.7603273 10.3236790 10.5164083 10.4488167 NA 9.6312831 5.0277954 4.3681328 10.6398004 5.8218530 9.7439293 10.7826817 8.0637407 14.3017181 10.0290346 10.4848174 13.1717040 12.5827351 9.2978430 -0.1553733 TCGA-BH-A18U 72 1 1563 NA breast stage iiia t2 n2a m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 9 white not hispanic or latino 93.58.0 6 3 1 NA 3 2 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.977346e-06 9.713281e-07 12.0510066 2.8849105 8.4784279 10.9622277 NA 10.4791391 -1.5075828 10.2743554 11.3521207 8.5066063 9.7440682 7.0624412 7.9292975 8.9272141 7.4114491 9.7969372 9.2128302 10.1886840 7.8567206 4.7779877 9.9381182 9.6693824 13.2207722 10.8043342 10.8274178 10.7330791 4.9355305 10.8504018 NA 3.2474719 7.9417343 10.6234782 13.2956575 7.6873428 16.9980641 12.0400830 7.7617128 6.2272963 3.0775506 7.9458564 8.2051129 6.5478678 7.0700147 12.7103164 NA 9.4144269 13.9081956 0.8145094 9.7912213 11.7400684 4.9188489 7.0700147 3.0161397 14.7780741 10.0117307 -1.5075828 8.1436378 NA 5.1507993 10.8012094 9.6212248 7.2306786 12.5587592 9.7716161 9.7333772 NA 10.6423330 9.5287594 6.1072966 7.6321373 NA 9.7529175 14.6119323 8.5607998 11.1139510 11.4374809 7.6574928 1.6625245 6.0999158 8.6461378 9.1614708 11.8638180 -1.5075828 5.3752306 6.5038130 10.2059724 10.6977683 7.7940818 6.1292109 5.3254764 9.9899388 12.3074687 2.5800490 13.3426262 6.2272963 6.9964113 11.0329561 12.9300779 12.9062799 6.7262059 9.8122580 10.6244428 9.8320518 10.7620048 4.7779877 8.1912907 14.0520825 9.7286001 1.8145094 9.7020393 9.5315049 1.4925711 2.2226809 9.7303934 9.1146377 9.8757501 9.5932482 15.4144152 10.2566281 10.5052104 8.6167073 3.2999480 15.8394545 9.8913296 12.4942580 10.7811636 9.6848787 8.1310220 7.5066067 10.4477054 -0.560650 0.684770 1.041700 0.763110 1.773500 0.246710 0.450060 0.485470 0.579560 0.571510 -0.055746 1.572500 -0.075816 -0.040729 1.113200 0.851460 0.851460 -0.039642 -0.039642 -0.563340 -0.217610 -0.226110 -0.330610 3.656900 0.285190 -0.339270 0.078518 0.199260 1.142100 -0.336740 -0.560650 -0.013429 0.823370 -0.659910 -0.513710 0.490640 0.490640 -0.674410 -0.603690 0.015610 -0.305790 -0.329800 0.068689 -0.919040 -0.576330 -0.255860 0.362180 -0.040729 -0.040729 -0.652660 0.784560 -0.039642 -0.039642 -0.039642 -0.592530 -0.606500 -0.226110 -0.706830 -1.292900 0.406970 -0.887410 -0.356560 0.078518 1.142100 0.118020 0.680160 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.646 0.646 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.306 -0.306 -0.323 1.314 -0.576 0.000 0.000 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.646 0.646 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.306 -0.306 -0.323 1.314 -0.576 0.000 0.000 7.90621357 12.91609579 8.68857309 8.80433434 3.24747185 10.72200563 -1.50758276 0.07751647 8.72620555 9.13734341 NA 7.26763598 2.66250176 10.75644190 8.97135559 4.55867785 6.50381302 10.18998796 10.82741781 9.94379697 8.91752902 7.82797649 10.40435234 -0.54392984 9.68857326 9.73337722 1.07751647 -0.50737767 11.39194280 2.66250176 13.58818896 12.04513492 7.43216521 9.55395715 9.49750858 9.72680466 4.77798774 1.66252454 -1.50758276 4.27394848 8.51356575 9.44605478 10.55260628 2.29994795 5.77743287 6.19994516 10.24705594 6.40547507 9.62444292 -1.50758276 8.94688523 1.66252454 4.01614862 9.69313513 6.03561731 6.57473429 9.28293435 7.80546917 8.29024745 1.66252454 14.01991017 0.49262233 10.02737511 -1.50758276 7.20683171 3.39947191 8.38132923 7.90832777 12.497762 6.260771 8.784908 16.998064 9.218804 11.342186 12.710316 10.969332 10.228133 10.489059 12.778638 10.630858 9.161471 8.961210 2.299948 8.187814 11.230678 10.460893 7.206832 8.215393 9.256628 10.683954 10.185672 5.876291 3.918854 10.804334 6.647404 3.350568 6.016149 7.976966 11.625246 9.240779 9.293486 7.854530 11.100610 6.547868 7.230679 9.770454 11.072138 8.700820 10.863001 9.969332 8.008286 9.126344 7.603721 6.980426 10.697768 7.699600 10.629257 9.989939 7.593327 13.613229 10.345505 11.445145 12.948812 9.853433 9.826300 1.814509 TCGA-BH-A18V 48 1 1556 NA breast stage iib t2 n1b m0 2-10-2014 female 2001 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4.544428e-06 1.17947e-06 13.420437373 4.654693306 6.467462089 11.662384526 NA 9.521809468 1.728704197 9.667097346 11.266300545 9.401826268 9.243605061 7.606437786 8.859006996 10.570415398 5.824617671 8.816156796 10.118002497 11.123370876 8.701386523 5.107206612 10.581691410 11.847375417 14.264552418 10.515943420 10.410635042 10.928120821 5.799082124 11.557940899 6.417992559 1.866195849 8.633177975 10.605824594 12.960527040 9.546956371 12.346804016 10.855656353 9.867221587 4.050623586 0.406754337 7.783976486 10.928856840 8.864146516 5.824617671 5.395450163 -1.593354492 11.338795927 9.190582516 9.510053621 9.001771286 11.261634120 7.824618307 6.630768022 -0.008246888 15.284410809 10.177842442 2.214124805 9.620477544 NA 4.976620255 9.602753046 11.580911213 9.102863856 10.559367530 9.179080297 10.312904732 3.536052900 11.056021966 10.612864352 4.728693314 8.373992228 2.728704197 6.174949644 14.932989886 8.047589099 11.106771903 10.717662544 10.827252344 3.214124805 NA 7.064977672 10.744666354 10.064530858 NA 4.945926020 7.775272488 10.106771903 11.256757233 5.525705588 7.277130218 7.757704684 11.023544309 11.985845956 -1.593354492 13.826166393 2.494236382 6.586674685 10.997118920 11.797875078 13.353900404 7.349280344 10.778270188 10.492238265 10.678354270 11.198132158 4.914559740 7.661794484 12.919382786 9.422180850 4.976620255 10.431212902 8.545037435 6.724178208 4.167783415 9.658839847 9.395450377 11.014327255 9.734318414 14.378937842 10.423574074 10.486250587 5.417994246 0.728660667 11.674722851 6.566637089 12.895986543 10.377950020 9.571044203 9.865172320 8.496878138 11.165567801 0.108040 2.064000 -0.100790 -0.051316 1.719200 -0.400860 1.330900 -0.476590 -0.063435 -0.476910 -0.476910 2.341800 1.725900 -0.062495 0.355280 1.361700 0.333670 0.393800 -0.475860 2.555800 -0.464300 1.016300 -0.448030 -0.022881 -0.465670 0.348110 0.348110 -0.433330 0.504290 -0.455110 -0.479130 -0.519420 -0.051316 -1.292900 -0.594870 -0.483550 -0.483550 -0.476590 -0.119780 -0.489110 -0.477840 -0.519550 -0.553730 0.296920 -1.292900 -0.473630 0.365100 -0.062495 0.323500 -0.484810 -0.499340 1.322800 -0.458220 -0.943270 0.247470 -0.437340 0.283110 1.278200 -0.464620 -0.022881 -0.477230 -0.460890 -0.433330 -0.477440 -0.472010 0.416300 -0.351 -0.454 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 -0.351 -0.454 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 8.269403033 13.014211678 2.107219168 9.110669393 3.692170508 11.332505600 1.576667247 9.818276671 8.713966570 9.862093029 5.882498773 8.375317514 3.406767940 11.356592491 9.468811978 -0.593136842 7.824618307 10.172880499 6.530886960 7.902620518 8.594897089 7.654693306 10.762942563 3.576691430 9.549511117 10.312904732 1.214124805 NA 10.199149396 -0.008246888 11.872969699 12.048704590 7.057817398 9.214925460 8.713966570 9.753833482 3.264746590 3.536052900 0.728660667 7.168317104 8.292461984 8.214120919 5.746616431 1.866195849 6.921322068 6.050621409 9.642779899 5.161653931 9.096763639 1.991716838 12.724814213 5.006679520 3.050623586 9.835999844 7.814182525 6.006679520 9.169978100 8.782891108 6.746616431 0.406754337 12.771857875 -0.593136842 11.321711393 0.991753112 7.579192973 2.406754337 8.277130683 7.603982339 13.659542 7.748840 8.019634 12.346804 11.046333 10.389759 5.395450 11.704399 9.502822 11.481889 14.794985 12.801228 10.744666 7.025152 3.654688 7.343403 11.369120 11.027444 4.384043 8.405356 8.571673 10.109371 10.719399 6.833030 4.596589 10.515943 1.406754 -1.593354 8.218943 10.908496 12.437174 11.001557 8.136387 7.814034 9.689854 6.742156 9.102864 9.929347 12.022051 11.851004 10.440877 9.612559 NA 9.133103 7.658935 6.768710 11.256757 7.220547 10.861900 11.023544 7.982305 13.012882 9.970915 10.204022 13.038170 11.042711 9.672967 1.991717 TCGA-BH-A1EN 78 1 2127 NA breast stage iia t2 nx m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.621532e-07 3.059253e-07 11.08035221 6.07971730 6.96705906 11.10718215 -1.65517150 9.53606689 1.34499888 10.11360557 10.84858507 6.28752216 9.14266922 7.44303967 7.96888908 10.68874870 5.31079089 9.23906765 9.64077672 9.34782287 7.60475113 -1.65517150 8.13291044 11.06888198 12.55202207 8.73732510 8.43247049 10.25490082 3.20298184 10.24360911 -0.65494432 -1.65517150 10.06525200 13.27985040 11.56991384 6.88416686 17.34854762 12.60680886 10.87126243 5.09989690 0.34505568 4.15236192 7.85676041 9.03238356 6.42182416 12.72343808 2.73731901 9.04631425 7.03500579 4.70255781 9.68763813 10.86169271 10.30826507 6.51493335 -0.65494432 12.13486840 7.59293536 2.80444599 8.96063739 NA 3.83686334 9.77336788 11.02448785 10.14994548 9.94956090 9.35343644 9.94956090 0.34505568 11.96442535 9.96705950 4.38940161 6.20298967 0.34505568 7.82478822 14.48783278 6.49551609 11.62824083 9.58161996 7.38118126 -0.07005755 -0.65494432 7.67143704 8.83184273 10.43809518 -1.65517150 6.47429001 7.19675653 8.94770648 11.22439957 3.89960103 4.80444083 4.38940161 9.89815695 11.47042120 -0.65494432 14.38501914 3.73732983 6.91106236 11.86513531 13.54368299 12.80142634 6.01743202 11.62505350 10.97185749 10.19806768 10.76444129 4.27574460 9.16279085 11.35640971 8.54590622 NA 9.89575460 8.98072596 5.04544734 0.90326970 10.14266922 10.23260920 9.45353219 9.03936572 15.39926228 9.77179663 9.82731158 6.93372252 2.59292341 16.12634184 9.89959665 11.63286437 11.69428897 9.87736374 8.14266922 8.49602446 9.84120249 -0.574810 0.726890 0.726890 -0.116050 -0.127250 -0.126860 0.329400 0.359790 -0.606170 3.656900 -0.631390 3.656900 0.314270 0.323920 3.656900 -0.599770 3.656900 -0.122310 -0.122310 -0.580430 0.327300 -0.107020 -0.082988 3.656900 0.343000 -0.073397 0.352120 0.352120 0.359140 -0.574810 -0.574810 -0.161210 -0.116050 0.338300 -0.126860 0.329400 0.312030 0.359790 -0.606170 -0.085777 0.739970 0.739970 -0.611180 -0.113830 -0.113830 0.325050 -0.592730 0.323920 0.323920 -0.592480 -0.604230 -0.122310 -0.122310 -0.122310 -0.595830 -0.117620 -0.107020 -0.606600 -0.082988 -0.558310 -0.597600 -0.520350 0.352120 0.340240 0.342030 0.389090 0.314 0.314 -0.563 -0.563 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.555 -0.555 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.611 -0.611 -0.119 -0.119 0.000 0.314 0.314 -0.563 -0.563 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.555 -0.555 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.611 -0.611 -0.119 -0.119 0.000 8.3379461 11.9430603 8.8217539 8.9688894 2.0454430 11.3723955 NA NA 8.8217539 6.4794343 NA 7.3168390 3.8685682 11.1357635 8.4896662 0.3450557 7.0898413 9.8252931 11.3310275 9.5852027 10.0697816 8.1115369 9.9638521 1.6669383 8.8986371 9.9495609 1.3449989 NA 9.1563825 0.6669383 11.9968443 12.2411509 7.4110966 10.7915741 5.9523382 9.7957035 7.2337510 3.2519008 -0.6549443 NA 7.8247882 9.0147787 10.6280961 3.1523619 9.8502239 8.9402651 9.9139140 7.4057040 8.9987487 NA 9.6708754 3.1523619 3.5929354 10.1160432 6.8592093 -1.6551715 11.1863755 8.5714201 8.6246182 1.3449989 13.6977409 -0.6549443 10.4972926 NA 7.9205470 5.0454473 8.9606374 9.0771752 12.4459279 7.0998948 9.3590283 17.3485476 9.5810220 11.6622790 12.7234381 9.9798189 11.8998388 10.3818682 12.6399156 9.8237774 8.8318427 9.7319479 -0.6549443 7.2904511 10.6487885 10.14104737 5.55445992 8.51117072 9.02272733 8.25789694 9.09512850 5.80443825 4.51493020 8.73732510 6.76286037 NA 8.28164586 6.42433260 12.73604990 9.17473048 8.33227157 8.48711489 10.34747122 3.15236192 10.14994548 10.57262368 10.86587189 8.89863706 10.07971730 8.99066618 -0.07005755 9.39746030 11.16932413 NA 11.22439957 6.13942447 9.21383037 9.89815695 6.35063161 13.65153231 10.20841971 10.41378605 11.57862743 9.78587696 8.86464396 -0.07005755 TCGA-BH-A1EO 68 1 2798 NA breast stage iia t1c n1 m0 2-10-2014 female 1999 NA NA other specify yes 1 white not hispanic or latino 103.51.0 1 2 5 3 NA NA 1 3 3 1 4 3 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 5.562279e-08 11.0650206 9.0259631 7.6703893 11.2533242 0.7796379 10.1075453 NA 10.7009636 11.4797692 9.1194685 9.4028903 7.8811562 8.6355251 9.4800581 4.6865117 9.0164300 8.9512121 10.3090491 8.6561352 4.4800583 9.3758082 9.8653122 13.8501308 8.8933607 10.1488523 10.5294879 6.2058832 11.0992906 NA 0.7796379 9.8872715 11.5976679 12.9602528 8.6334479 12.0945793 12.1203958 9.6135626 5.7645107 1.5165699 6.9157551 8.3720754 9.8084454 8.6251086 12.2852646 NA 10.3168369 13.3168368 0.1947175 9.1647619 11.2893935 7.2926879 4.0020094 NA 13.5974675 9.5455951 2.0020184 8.0833990 -0.8054086 5.5345068 10.3998382 12.4174508 9.6292841 12.3695816 10.4972949 9.9268233 2.3645724 11.6693759 9.6895115 6.0650208 8.1075451 1.1946544 9.9694431 14.7018312 7.8925962 11.2002805 11.6388944 8.6905110 -0.8054086 -0.8054086 8.1430229 9.6489552 11.6870099 0.1947175 7.0711727 6.6125088 10.5740343 10.7381711 8.8421143 7.6540875 6.0894727 10.9335926 11.6751937 -0.8054086 13.7829607 4.6865117 7.1015461 12.5822694 13.0939184 12.7050493 7.7945686 10.2681281 11.0723235 10.6082574 10.9615989 5.2821173 7.3393138 12.1075453 12.3353260 0.1947175 10.4995776 9.4294733 0.1947175 1.5165699 9.6019238 10.6784717 10.4944363 9.7502037 14.5702724 9.7540330 11.2434834 7.3239393 5.0275478 14.6410608 8.4162431 13.7622556 13.2239432 10.2540004 9.3770502 8.8985597 9.9540116 -0.00193990 0.61086000 0.62533000 -0.00165610 -0.01986300 -0.03084400 0.29676000 0.33221000 0.29333000 3.65690000 2.07580000 2.52150000 -0.33733000 3.65690000 0.30665000 0.37463000 0.37463000 0.36133000 0.50794000 -0.03283100 0.00083195 -0.31961000 -0.30345000 0.02820000 0.02820000 0.34941000 0.34478000 0.36559000 0.32721000 0.01880300 -0.00193990 0.02974700 0.36657000 0.00041593 -0.03735400 0.29676000 0.29676000 0.33221000 0.29333000 -0.35931000 0.31838000 0.32125000 -0.35168000 0.00000000 0.00000000 0.00000000 0.00000000 -0.72967000 -0.34274000 0.30665000 -0.34469000 0.31385000 -0.34744000 -0.34744000 -0.01697900 0.00083195 -0.31961000 -0.32379000 -0.30345000 0.02820000 -0.34630000 0.34941000 0.34478000 0.32721000 -0.00373950 0.05266800 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.034 -0.324 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 1.724 2.076 0.000 0.000 0.106 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.034 -0.324 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 1.724 2.076 0.000 0.000 0.106 9.5815962 14.1271937 10.0588421 10.3620741 0.7748398 9.8758943 NA NA 8.1459408 8.8294671 1.5165699 8.3094654 4.8385131 10.0164299 8.7758565 0.7796379 10.3012188 9.5478028 9.7833705 8.3545271 8.6702678 8.1164968 11.0393617 3.1015492 8.0588419 9.9268233 3.3645864 NA 10.3194235 2.6540918 11.7432371 11.8807187 9.3303652 10.8235571 8.4520439 9.0354339 3.0020184 2.0020184 -0.8054086 3.1015492 8.4234748 7.4089750 10.4573381 5.1015450 6.3374774 5.1488528 9.8626546 6.5345052 9.5642534 2.0020184 11.1338678 3.4425853 4.1488528 10.1659912 5.5743801 1.7796379 9.9553759 9.2184102 2.1946544 NA 12.8140735 0.1947175 9.9011520 0.7796379 7.8056807 5.4614434 8.6396706 8.3570474 11.307421 5.749245 8.688512 12.094579 9.805681 10.228079 12.285265 11.010439 9.241398 11.357362 13.209897 9.728959 9.648955 9.787113 NA 7.266118 10.916610 11.223253 5.569695 9.190423 8.430670 8.686509 9.822226 6.629284 5.569695 8.893361 6.194656 3.364586 4.194654 5.809219 11.885309 10.414430 8.265608 7.484675 12.787347 5.534507 9.629284 10.363955 9.788047 10.169071 10.546699 9.180498 NA 8.939507 8.151642 3.194654 10.738171 9.424676 10.242462 10.933593 6.756898 13.550970 9.773972 10.407152 13.199052 10.501287 9.617772 2.194654 TCGA-BH-A1ES 35 1 3462 NA breast stage iib t2 n1a m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 103.51.0 3 1 2 2 NA NA 1 1 3 1 1 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 2.781139e-08 11.6203851 4.2366839 7.4204782 11.0881583 0.7130799 10.5664284 NA 9.8880446 12.2848715 8.6468096 10.2464486 6.3713306 8.7465419 9.1581338 7.4680065 8.7684014 10.4031169 10.8842956 7.2600134 NA 11.2566341 8.2980814 14.4220949 12.3172087 9.2049719 11.3470222 3.1725515 10.5180565 NA 0.7130799 8.4135585 12.1364974 13.9177664 8.6556334 12.7884309 13.4538483 8.7410250 5.1054350 NA 6.6673145 8.7215473 6.9799053 8.8805371 13.4483575 0.7130799 9.3055759 14.2978465 3.1725515 9.2248716 11.3917190 6.7899340 7.2129652 NA 12.8434030 10.0316616 1.2980717 7.3424756 1.2980717 2.8830342 10.6124758 9.8488281 9.7534086 11.8886684 10.2464486 9.5059092 1.7131239 11.3461141 10.2139607 5.5460085 7.4342179 5.5957632 11.3415644 13.9659321 8.1635878 10.8391780 11.5483798 8.1393835 1.2980717 6.7243460 8.7899346 9.3461141 12.1241001 -0.2868321 6.2677081 7.4066055 10.1086530 11.7965982 10.8443328 4.7575140 3.2980864 10.7899344 12.3458869 6.2209142 13.6602992 4.7575140 7.5075346 13.3603524 12.5234896 13.1444859 7.1888519 10.0706708 11.2701038 10.9841674 11.6903988 5.8628654 9.1456606 12.3963328 13.6357962 -0.2868321 10.0772535 9.8424019 NA 1.3076617 8.9467385 10.6578309 11.3121019 9.5140187 14.9513370 11.5961439 9.9274380 8.6018621 3.1725515 14.9815878 8.8654036 13.4944786 11.4316517 10.5091584 9.6673152 8.6438562 9.9002111 0.01537000 0.01537000 0.00964690 0.00000000 0.00000000 -0.00166290 0.01209700 -0.45661000 -0.50863000 3.65690000 -0.72208000 0.91400000 0.01279500 0.01276100 -0.02630400 1.66800000 -0.76064000 0.02118300 0.01913800 -0.01881300 0.01335300 -0.24484000 -0.73670000 -0.28513000 -0.71568000 0.01282000 0.01282000 2.01720000 0.02848100 0.04244900 0.01537000 -0.23251000 0.00000000 0.00305220 -0.00166290 -0.76587000 0.01363200 -0.46249000 -0.50863000 -0.46600000 0.00027244 0.00430210 3.09120000 -0.54975000 -0.54975000 -0.54975000 -0.54975000 0.01276100 0.01276100 -0.02630400 -0.76064000 0.02118300 0.01913800 0.01913800 -0.01881300 0.01335300 -0.24484000 0.01992300 -0.73670000 -0.70684000 0.00346870 0.01282000 -0.71986000 0.02848100 -0.00578030 -0.74098000 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 8.7979273 13.4863611 9.9574827 9.6438562 2.3313613 10.9880793 -0.2868321 0.7130799 8.5332978 8.5648678 1.2980717 8.1011363 0.7130799 10.3506494 9.3641706 1.2980717 5.5957632 10.5467996 10.3130316 9.4393370 9.7229335 8.0618469 10.2877124 0.5928278 9.8032312 9.5059092 3.4135535 NA 9.3315044 2.5204725 12.3766770 12.1147984 7.8372400 10.0859839 8.4779905 9.4066058 6.5586090 -0.2868321 -0.2868321 0.7130799 8.1807242 6.9705063 9.7939364 3.2980864 9.0424443 5.2366801 10.4895519 7.5773049 11.2307882 -0.2868321 9.1288607 2.5204725 4.6200116 9.6208208 6.0236413 1.7131239 7.8577770 5.9610468 3.0350432 NA 13.8224598 -0.2868321 10.8443328 NA 7.4613116 4.5204725 8.5460089 7.8320602 15.629301 6.643856 8.690399 12.788431 10.308125 10.163299 13.448358 11.897994 8.497754 11.082716 12.986769 9.756146 9.346114 8.781897 NA 6.427365 13.095473 10.5780787 7.2677081 9.3148895 9.5896358 8.0529690 9.9841383 4.3569748 7.3784544 12.3172087 6.3130318 9.1908770 8.9419376 8.3287485 12.2679475 9.5972894 8.2089737 8.7018034 11.6792638 2.0350608 9.7534086 10.3296676 10.7486053 9.3587773 10.0203197 8.8137812 -0.2868321 8.2798961 8.2198428 3.4135535 11.7965982 8.7602429 10.3899575 10.7899344 6.6200101 13.9393052 10.5491692 9.7670448 11.5888682 11.0772535 9.2561506 NA TCGA-BH-A1ET 55 1 2520 NA breast stage i t1 n0 m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 103.51.0 5 2 2 2 NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 10.5577951 7.1722615 7.9504066 10.9754572 1.6911321 11.6523911 -2.2155798 10.3945765 12.0022772 7.5883751 9.6569185 8.1904489 8.2579497 8.8374908 7.1657864 9.5420504 10.9135268 10.0271202 7.7427965 1.2436691 10.4959108 8.9863677 13.3836336 10.9874388 9.5911960 10.6653577 5.0510284 10.6822782 0.1062143 1.7842527 8.6383331 12.8407968 12.6952143 6.5623203 12.7032001 13.0239169 8.5680606 6.2599767 3.1061640 5.8449405 8.6414474 9.5643734 7.4026292 13.5095834 3.4566748 9.6052204 13.8627699 3.1417924 9.3219475 10.9700484 5.7442445 6.7615233 NA 13.2921595 8.3813651 0.7842527 7.6060180 0.9541963 5.2518478 11.9477362 10.6171338 11.2293880 11.2775989 10.6571110 8.9396944 1.1061473 12.1797110 9.6703213 6.6546088 8.4646033 11.6945117 11.1124980 13.7727731 9.3935333 12.0331349 11.6723211 7.1373908 0.3691593 4.2599805 7.4299021 9.6060178 12.9794237 -2.2155798 5.7672363 7.0009893 8.9979557 11.4416738 6.3272760 6.5980242 3.5391340 11.0951405 11.8491549 3.2760946 13.4634489 8.0297963 8.1946953 12.0601500 11.8451085 13.4579393 7.3729582 10.3328248 10.8725351 11.0557827 11.4213214 5.3388309 8.6202942 11.7787740 8.0416318 -2.2155798 9.8898249 9.2120805 -0.2157473 3.1421520 9.3004363 10.6295378 10.4619634 9.1027865 14.8270787 10.1853900 9.9672587 9.3771680 2.5391340 15.7206229 11.0870255 13.1368045 12.2109672 9.9093343 9.0292022 8.8835915 9.7031033 0.00063826 0.00063826 0.00063826 0.00069327 -0.00287370 -0.00249380 0.00000000 -0.00207840 -0.00207840 -0.00083160 -0.00083160 -0.00083160 0.00000000 0.00000000 0.00539780 0.00610900 0.00610900 0.00194180 0.00194180 -0.00318590 0.00305220 0.01237600 0.01530800 0.01530800 0.01530800 0.02132300 0.02132300 0.02132300 0.01084200 0.02496900 0.00063826 -0.00636680 0.00069327 -0.00249380 -0.00249380 -0.00760080 -0.00328330 -0.00207840 -0.00207840 -0.00207840 -0.00097017 -0.00097017 -0.00083160 -0.00529560 0.00505780 0.00505780 0.01852300 0.00000000 0.00000000 0.00539780 0.00610900 0.00194180 0.00194180 0.00194180 -0.00318590 0.00305220 0.00960290 -0.62291000 0.01530800 0.01530800 0.00305220 0.02132300 0.02132300 0.01084200 0.00140930 -0.59531000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.408 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.408 8.9985628 11.7504788 6.1196342 9.6515225 3.5600791 10.0085470 1.2436691 -2.2155798 7.9044817 7.6281648 NA 8.2880595 1.2436691 10.4108654 9.4244886 1.3692152 9.1706452 9.6012274 10.7944221 10.3330657 9.6728196 8.4361922 10.3609643 4.5524263 10.0748387 8.9396944 4.4136009 4.9237957 9.9151360 3.1061640 12.8244907 12.1163503 8.5214909 10.6147590 7.9997768 8.9566712 3.7149818 1.3692152 0.5915837 2.3692152 8.6052206 8.2830930 11.5068378 5.1417965 7.3009291 5.4352952 10.4588774 6.8121503 9.4663606 -1.2159149 11.4150797 2.3078074 5.2840884 10.1053263 6.1492980 4.6171339 9.1984003 7.7471396 8.1516584 NA 13.5191121 -0.6308407 9.6472685 -2.2155798 8.8306857 5.6044213 8.0154647 9.2068342 13.020638 4.498487 9.762239 12.703200 10.650557 10.543924 13.509583 12.267304 9.126658 11.218220 13.084096 8.652295 9.606018 7.567242 NA 7.857046 11.400678 10.945376 6.974068 9.321947 8.898637 8.240598 10.544271 6.413601 7.781423 10.987439 5.449581 2.428089 2.307807 5.779163 10.676976 10.113480 8.983431 8.088024 12.104762 5.969118 11.229388 10.507691 11.505877 9.297478 10.682089 9.791972 -2.215580 9.463627 7.912547 5.442456 11.441674 7.629734 10.674888 11.095141 7.108424 13.348689 10.373895 10.866725 13.135528 9.515138 9.353625 2.106181 TCGA-BH-A1EU 83 1 1286 NA breast stage i t1 n0 m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 103.51.0 8 2 2 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 8.343418e-08 10.9236224 10.2506937 7.4501679 10.8899562 2.3678183 11.3794808 0.7239517 11.0579439 11.8290401 8.1119671 10.0962711 8.5061294 8.7805877 8.8919954 6.5600011 9.9406959 9.7246544 10.3411879 8.7880191 6.3641942 10.5397336 8.6803261 12.6200459 11.5977786 9.9113021 10.7168884 7.1076544 10.9317270 0.3089433 4.8635024 10.3533066 13.0464416 12.6599438 8.1544025 11.3750017 12.9295142 9.0979028 7.3785862 3.9137702 6.9382693 9.0571055 9.4582364 7.4278534 12.8797960 2.2475022 10.3512560 12.9582436 7.0548669 8.8995433 10.6761453 9.8024345 8.5827080 -2.2757863 13.8181711 9.7843690 1.3088851 8.0116622 -2.2757863 4.2631095 10.7138767 10.6096465 10.4788376 11.7215706 10.5987393 9.5904562 1.7239517 12.1587086 9.9854573 6.0047216 8.6502461 -0.6910567 11.5952778 13.8900543 9.3819071 11.7567707 11.6516354 8.8951269 1.1833912 1.0458623 9.2297617 10.0280161 12.4249316 -0.6910567 4.7683431 6.9088249 10.5562467 11.3406138 9.2770993 8.2406349 5.7628697 10.8636613 12.0806083 0.0458623 13.3032660 6.1544030 8.3312802 12.2044247 11.0250175 13.4195046 7.3821614 9.3655502 10.9214740 11.4098289 11.4850857 6.0231577 8.6997980 11.7588350 9.9536702 0.7239517 10.1410113 9.6708563 4.1668922 4.0641586 10.2655307 10.5294924 10.4563295 9.6853997 14.9261409 10.0831506 10.6971093 9.9769110 3.4788424 15.3015633 9.1157306 13.5342706 12.7323349 10.3718581 9.1216247 9.1523102 9.9139135 -0.220340 0.284220 0.276470 0.037500 0.037500 -0.223420 0.295170 -0.225270 -0.222190 0.181020 0.181020 0.181020 -0.221940 -0.221940 0.026795 0.030392 0.030392 0.182530 0.181320 -0.226250 -0.064508 0.037500 -0.216390 -0.215030 -0.215030 0.035696 0.035696 0.042732 0.115400 -0.219600 -0.220340 0.000000 0.037500 -0.223420 -0.223420 -0.225880 0.285800 -0.225270 -0.225780 -0.222190 0.034536 -0.216390 0.181020 0.131430 0.131430 0.131430 0.137610 -0.221940 -0.226550 0.026795 -0.229450 0.182530 0.181320 0.192380 -0.226250 -0.064508 0.037500 -0.220590 -0.216390 -0.215030 0.283110 0.035696 0.035696 0.130510 0.019223 -0.234430 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 10.5731597 12.5185182 8.0759936 9.9397863 5.7900396 9.3233980 5.1668922 1.3088851 8.0682457 8.3560364 -0.6910567 8.8169913 3.9334027 9.9137746 9.4846701 0.8939058 11.1181448 9.6861232 10.1282934 8.4586597 9.6695073 8.9878060 11.1314834 4.6065903 9.6785098 9.5904562 4.1333416 -0.6910567 9.8226401 4.4921352 12.4707792 12.0626864 8.7594365 10.4407695 9.4373366 8.5208009 7.0185708 2.1162649 2.0458623 0.8939058 7.8609411 7.2416190 10.4113257 7.2037307 6.6677545 4.7239517 9.8445120 6.9088249 9.0935475 -0.2761357 12.2593469 5.1751613 5.8272373 9.7320285 5.1747500 7.0481304 9.7278192 9.6631619 5.7518573 -0.6910567 13.7402143 1.1833912 10.1462777 -1.2761357 7.9075853 5.8787670 8.6119322 8.8749666 13.094011 4.518365 8.429582 11.375002 10.587809 10.482590 12.879796 12.825803 9.498210 11.820748 13.520116 10.298780 10.028016 8.851945 -2.275786 7.266982 11.631967 11.044187 8.381483 9.082601 8.115194 8.194609 10.392613 7.629337 7.578819 11.597779 5.863502 3.215803 6.881298 6.888480 11.259954 11.127228 8.136520 6.952769 13.007617 8.282371 10.478838 10.553871 11.315823 9.678510 11.074199 9.260683 NA 9.008144 7.799616 8.243586 11.340614 7.905102 10.625190 10.863661 7.965933 13.836634 9.788693 10.377691 12.610647 9.465838 10.313133 4.063796 TCGA-BH-A1EV 45 1 365 NA breast stage iiia t3 n1b m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 103.51.0 6 3 3 4 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150798e-06 5.550446e-07 11.4746352 2.9563727 6.3279352 11.4137564 -0.3654997 10.1702088 NA 10.1162469 11.5731082 7.8217995 9.8871129 7.0480749 9.0804967 9.6726806 8.5155615 8.8093730 10.2033536 9.1832694 7.0565120 -1.3654997 11.9827607 10.0507172 13.6112800 9.9996763 9.4117027 10.5948115 2.2194009 10.9546839 -1.3654997 4.6344481 7.8847457 11.2475462 13.2465096 7.8143562 16.7363154 14.0062241 8.8043724 7.8941908 6.1890358 6.4223508 8.0459584 8.9974872 7.5944493 13.3582150 0.9563541 9.4924285 13.6556009 7.4609956 9.3909870 11.2161188 9.0018622 6.1736072 NA 13.3807933 10.6839557 1.6344539 8.0353270 -1.3654997 5.4158060 10.5178544 11.5882801 9.4617901 10.7672685 9.7905305 9.6637347 1.8043840 11.5294546 10.5596309 9.2250346 7.6815715 5.5769604 10.7771927 15.4086683 8.0003978 10.8805942 10.9198496 8.4321088 6.1020534 -0.3654997 8.0794624 9.1051063 11.0690757 -0.3654997 7.4125250 7.6678701 9.8205616 11.0693362 4.3348900 5.2783045 4.9563773 10.2904253 11.7993544 2.2194009 13.5529380 5.5651859 7.4609956 11.9855247 13.2437416 13.0602534 7.3418070 10.5086604 10.3602397 9.6931156 12.0599256 6.4482287 8.8353459 13.1871165 8.4207169 4.6568167 10.3555466 9.6484680 3.2194164 3.3046133 10.4125245 10.3178807 9.7566284 9.5562884 14.8306269 9.2427023 9.9715118 9.0773910 5.1262997 15.0314869 9.3959987 12.1666816 12.6863361 10.1837507 9.4900945 8.5842741 10.8893845 -0.51331 1.34870 0.20993 0.91178 0.58901 -0.43502 0.27174 0.23407 2.39120 0.40033 0.40033 0.56986 0.23117 0.24311 0.00000 -0.01180 -0.01180 0.20580 3.65690 -0.11913 0.24078 -0.14091 -0.52000 3.65690 0.48509 -0.17360 0.16550 0.16550 0.23272 -0.53327 -0.50660 -0.12187 -0.12588 -0.18886 -0.41859 -0.17132 -0.11834 0.22993 -0.51681 -0.53429 0.59368 -0.53715 0.40033 0.24934 0.26561 -0.14312 0.20350 0.24311 0.25840 0.00000 -0.01180 -0.13186 -0.14348 -0.14348 -0.51340 0.24078 -0.79886 -0.51641 -0.52000 0.42049 -0.50871 -0.17360 0.16550 0.23272 0.64103 0.21039 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.603 0.603 0.204 0.083 0.000 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.603 0.603 0.204 0.083 0.000 8.6761066 13.7208325 7.1658285 9.7219102 1.8043840 11.3523380 -0.3654997 -0.3654997 7.9676027 7.3859918 NA 8.4705295 2.0938644 10.1481750 9.3884998 1.9563913 5.1262997 9.3733842 11.7119308 9.4264243 8.8903376 8.4767976 10.8605585 2.0938644 7.7892656 9.6637347 -1.3654997 0.9563541 9.8255066 2.3348829 12.7916364 12.9328680 6.9473307 10.4522305 7.7245596 9.2500771 8.6045532 2.0938644 -0.3654997 5.8632670 8.0877179 9.2592428 11.4104692 1.8043840 9.3373646 6.5048126 9.4720755 5.5413383 8.4908729 NA 11.1149852 0.9563541 4.0607132 9.1123978 5.9355776 3.2782970 8.9631224 7.5503266 5.9920002 -0.3654997 13.9702913 -1.3654997 9.8242721 0.2194628 7.1928678 5.8242714 8.2819059 8.3893349 11.990675 5.415806 7.763730 16.736315 9.577189 10.006768 13.358215 12.620467 9.566662 11.285723 13.486587 9.178446 9.105106 8.923314 1.441802 7.158010 11.011929 11.5403985 5.4799387 8.4256104 8.7507914 9.4385786 11.3525950 6.1501474 4.1263039 9.9996763 6.4288626 3.3893328 5.2343595 7.3434620 11.5341820 10.3055462 8.4917753 8.4092344 11.0866886 3.5886487 9.4617901 10.1885566 10.5585176 9.9444922 11.2304042 9.2546673 10.3801217 9.3921208 7.9374291 4.8043737 11.0693362 8.7598609 10.6488272 10.2904253 7.5201441 13.5713614 9.6644247 10.2057261 12.4697084 10.7996685 10.0799796 0.6344074 TCGA-BH-A1EW 38 1 1694 NA breast stage iia t2 n1b m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 103.51.0 8 2 1 4 NA NA 1 3 2 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 1.112456e-07 11.3438570 8.9075820 6.8681731 11.3201200 -1.4759363 10.4594110 0.5238630 10.3456515 12.2031377 7.8923837 9.2208450 7.6350136 9.6271654 9.1523231 6.1237903 8.8934751 10.2953671 10.2312367 7.8681737 5.2653431 10.2376936 9.9343290 13.5306419 10.6650267 9.1731337 10.7351575 5.8184978 12.3275022 NA 0.1088924 8.8858214 11.4442304 13.4877219 7.8614995 12.9607192 13.3632290 8.8491830 6.0630369 2.1088255 7.4896617 9.3480407 8.6583040 6.4247441 12.6470290 0.5238630 9.6447634 13.0923088 3.9833129 9.4715876 10.8587095 8.1785135 3.4307670 NA 14.1859451 11.0906452 1.1088255 7.5545443 NA 4.6531632 10.3539966 10.7466725 10.5214099 12.2587988 10.2243173 10.0610960 3.7333326 12.0966962 10.4882184 5.7622824 7.5238779 6.7812653 11.4522109 14.9509448 8.8647625 11.7780204 12.2283216 8.5980190 1.6938103 5.0937334 8.6748942 10.5781427 11.7634761 0.1088924 2.9833129 7.0435140 10.2077494 11.1473019 5.5011589 7.3280088 4.2243182 9.6786957 11.8925204 1.9833129 12.8367605 6.3312323 8.1641225 12.7422138 11.8786779 12.9257571 8.4911039 10.6424943 11.1785136 10.8426858 11.6426565 5.4896617 8.5448574 13.9738967 10.1196013 -1.4759363 10.5662209 9.8356258 -1.4759363 2.9872299 9.9075819 10.6284763 10.5929917 9.5710015 14.4312377 11.0066856 10.9247570 7.1892138 6.7087528 15.5848268 9.2042371 12.9344614 11.8013103 9.7394105 8.9385628 8.5153994 10.6083538 -0.2923400 0.7910300 0.7700400 0.9569300 1.2718000 0.2251000 0.8884600 -0.0159280 -0.0159280 -0.0125760 0.2538600 0.5709900 0.2282300 0.0000000 0.0553730 1.9493000 -0.1578400 0.2627900 3.6569000 0.0515300 -0.2495800 0.1937500 -0.0047079 0.4926800 0.4926800 -0.0766780 0.1825300 0.1825300 0.3822100 0.0101460 -0.2923400 -0.0202750 -0.3024000 0.2733200 0.2251000 0.0570830 0.0423070 -0.0159280 -0.0159280 -0.0120240 -0.3235600 -0.0297210 -0.5781200 -0.0145030 -0.0145030 -0.0145030 -0.0145030 0.0000000 0.0000000 0.0553730 -0.2862000 0.2627900 -0.2908300 -0.2908300 -0.6135500 -0.2561400 -0.0744110 -0.3018100 -0.0289010 0.4926800 0.0055529 -0.2975600 0.1825300 0.3822100 -0.0655810 0.0523830 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.760 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.760 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 8.633708 11.703787 8.985357 9.284597 4.790663 10.793881 4.108842 -0.476137 8.420210 6.501157 -0.476137 8.624724 2.771801 10.310147 9.382636 2.845811 10.011718 10.020232 9.435270 10.105078 9.705036 8.553165 11.060853 4.078465 8.334449 10.061096 6.776544 NA 10.900274 2.224318 12.072820 12.664787 7.767052 10.027206 10.914047 9.295367 6.436767 1.693810 -0.476137 6.093733 8.311780 8.817349 10.495062 6.153234 7.991687 5.703787 10.235975 7.359928 9.844678 -0.476137 10.267029 3.733333 4.568269 9.432615 6.028658 4.950142 9.174032 8.147759 7.089931 0.523863 13.338360 -0.476137 10.214749 NA 8.451655 5.153234 8.492544 8.066909 14.805644 6.375627 8.994536 12.960719 9.907582 10.604695 12.647029 13.144327 8.604695 11.624047 13.459825 10.919947 10.578143 8.136746 -0.476137 8.347245 11.760490 11.657020 6.890200 8.741835 7.943838 9.516816 10.420354 6.850307 7.433771 10.665027 5.663430 0.523863 7.560052 8.263540 11.703476 10.292062 8.114464 8.558677 13.328210 6.418696 10.521410 10.056234 11.627657 10.099417 10.767349 9.478074 -1.475936 8.839537 8.834093 6.224318 11.147302 5.031673 11.034743 9.678696 7.943838 12.816846 10.018733 9.804068 14.068269 9.794757 9.737589 1.693810 TCGA-BH-A1EX 67 1 1508 NA breast stage iib t2 n1b m0 2-10-2014 female 2000 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 2 2 2 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.781139e-08 12.1681991 7.6739387 7.8076467 10.5816076 0.5023306 10.2463379 -2.0825301 10.2183070 11.6824614 7.1724115 9.5279461 7.6756057 8.7471054 9.2538891 6.2527733 9.5385188 10.0838596 11.4899644 8.2050948 5.1653090 10.5940008 9.4536297 14.7369255 9.5499234 9.1425901 11.3673050 5.7439323 11.0529251 -1.0825301 0.5023306 9.3431231 12.5846050 12.2972347 8.1010181 12.9822937 12.4197171 10.0114603 7.0285183 3.6178274 5.8773835 8.8917971 6.6655761 7.7846610 12.5166562 2.0872931 11.1737387 12.2053113 -0.4975676 9.5004653 10.9638245 9.0479530 5.5612375 -2.0825301 14.0339369 9.5448800 1.8242791 7.6655754 NA 3.8481171 10.4621056 10.6099980 10.5044568 11.6536788 10.6828758 8.9699505 0.2392758 12.1197360 9.7303620 4.1268325 8.8053647 11.6377337 10.4959911 14.1246829 8.9954000 11.6165212 11.8090713 8.9159729 1.3767905 7.1389701 8.9604098 9.2842511 12.6010352 NA 8.7399534 6.9726651 9.0200146 10.9161492 6.6038830 7.1935066 5.5320925 11.1694566 11.7456182 2.3768182 13.8167159 7.2460574 7.3415491 11.9482221 13.4151097 12.9506335 8.5458282 10.5542337 11.0444096 10.5929427 10.7054891 5.4487655 8.3032451 11.5163656 11.6210699 NA 10.6431748 9.3225240 1.9173936 2.1706301 9.1059713 10.9312286 10.7776936 9.6268972 14.8998526 10.1566828 9.9497727 8.0569341 2.2393064 13.5186310 9.2245835 13.5688267 12.6307691 10.6243102 9.2050948 9.1127549 10.4478914 -0.0186280 1.1433000 1.1334000 -0.0179410 -0.0232920 0.2328100 -0.0319050 -0.0264410 -0.0264410 0.3288400 0.3288400 0.3419300 -0.0246610 -0.0246610 -0.0310860 -0.0310860 -0.0310860 0.0447150 0.0438650 0.7480300 -0.0224690 -0.0235660 0.3206000 0.3206000 0.3206000 -0.0018014 -0.0018014 -0.0018014 0.5763900 -0.0186280 -0.0186280 0.0066653 -0.0179410 0.2576200 0.2328100 -0.0319050 -0.0319050 -0.0264410 -0.0264410 -0.0264410 1.1106000 1.1190000 0.3288400 -0.0324310 -0.0324310 -0.0221950 -0.0076101 -0.0246610 -0.0405630 -0.0310860 -0.0310860 0.0447150 0.0438650 0.0438650 0.7480300 -0.0224690 -0.0235660 1.5140000 0.3206000 0.3206000 -0.0548250 -0.0018014 -0.0018014 0.5782600 0.5491200 -0.6222600 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 9.1310943 13.0321009 5.4092348 9.6503978 3.6722669 10.8819039 0.9173936 -0.4975676 8.5951023 7.9145621 1.8242791 8.0716688 2.8242791 10.3243847 8.7620883 0.5023306 9.9514937 10.0972916 9.8321414 9.6863939 9.6625568 7.7327658 10.2561189 3.4409389 9.5385188 8.9699505 5.0154128 NA 10.3882956 3.5023433 11.8547564 11.6742516 7.4584788 10.0844870 7.8686670 8.7977312 5.8302731 3.7753667 -1.0825301 4.5320925 7.9397502 8.0061706 9.5594343 3.5320925 10.5984496 6.2482995 10.4246816 6.0569346 9.6030074 -2.0825301 10.2776810 1.5023306 3.9834679 10.6260095 6.5368688 5.2924210 9.1176683 9.0291704 6.1462011 NA 13.0074122 0.7247376 11.4677686 -2.0825301 8.0873074 4.4565433 8.8802787 9.2994661 11.381450 5.900377 9.986161 12.982294 10.801030 11.286298 12.516656 10.856962 9.159246 10.938883 13.640163 8.554913 9.284251 10.358771 1.376790 7.041504 11.745420 10.81711709 9.00418226 8.72554247 8.75737367 8.94666975 10.16798896 6.67893388 4.57559673 9.54992344 5.09729054 -0.08268282 9.69997129 7.96430216 12.69699933 10.33101052 8.46234685 7.96723087 10.56011116 6.38090777 10.50445683 9.82765058 11.51018994 10.07851444 10.41747756 9.21429872 9.43111019 9.81708694 7.50319049 6.13655029 10.91614922 8.25834555 10.40046770 11.16945661 7.57380773 12.95308377 9.90890445 10.30000655 13.22863419 10.04085737 9.77652910 2.37681824 TCGA-BH-A1EY 79 1 538 NA breast stage iia t2 n0 m0 2-10-2014 female 2000 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 4 3 NA NA 1 2 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 7.509076e-07 4.171709e-07 10.56461491 7.28570090 8.43341477 10.56368554 -0.03622997 10.23931533 -1.03622997 10.02108769 12.01617098 7.60401793 9.94462642 7.82795872 9.26641177 10.18717117 7.88263571 9.86915981 10.57710182 10.28344481 8.19499417 4.57847988 10.75778243 9.17200714 13.26655446 11.26269447 9.07098979 10.31747095 7.39422516 10.70144258 -1.03622997 5.78395161 9.53552540 12.03858320 13.00876445 8.77755385 12.19394332 12.26855185 9.37740078 6.75818856 3.96377003 6.75167527 7.90628754 16.08268341 8.10332401 12.88459079 -1.03622997 10.53315372 12.47131965 5.00816863 9.06180481 11.05982897 8.68999098 6.77112759 -1.03622997 13.75051713 10.38478558 2.13369503 7.31250091 NA 3.71865753 10.43086878 11.36278360 9.19978692 11.08627724 10.57848261 9.50680463 0.96377003 11.53505137 9.59767623 5.51836203 7.96939746 -0.03622997 10.60807967 14.01685013 8.48350746 11.01668038 10.51644189 8.75981230 -1.03622997 5.23056041 8.47354788 9.05916976 11.62910868 NA 5.70523978 7.76790370 9.82097621 10.91067900 8.93818727 7.17322640 5.96377234 10.37634259 11.84354742 1.77112495 13.39029959 6.39840168 8.25379171 12.32941171 12.77985640 13.00131969 7.98891243 9.62555087 10.89598751 9.77294596 10.77313896 5.07229878 8.66247755 12.33132401 8.97079989 0.54873253 10.28061988 8.91942262 1.28569813 1.81377093 9.66940508 10.54025709 9.68743378 9.59130672 14.90153735 9.41395303 10.09369974 9.41909999 1.54873253 15.23734983 9.93962064 12.67705184 11.84851563 10.23465208 9.65813060 8.07490838 10.19442372 -0.51794000 0.00747380 0.52101000 0.01335300 -0.00210120 0.00041593 1.08510000 -0.52849000 0.00000000 0.00430210 -0.53134000 1.03120000 0.02272500 1.60330000 -0.00387790 0.01656500 0.01656500 0.00958830 0.00305220 -0.53916000 0.01964300 0.02820000 -0.49644000 -0.49840000 -0.50297000 -0.46557000 0.03045100 0.03990200 0.04344000 0.04060900 -0.51208000 -0.00041585 -0.52726000 0.01126100 -0.53358000 0.00458000 0.00458000 -0.52849000 0.00000000 0.00000000 0.00430210 0.00124810 -0.52338000 -0.51249000 -0.51249000 0.01992300 0.01992300 -0.52859000 0.02848100 -0.48565000 -0.52468000 0.00958830 0.00305220 -0.50784000 -0.52310000 -0.51476000 0.02820000 -0.49871000 -0.49644000 -0.49840000 -0.50960000 0.04340400 -0.48323000 0.03792400 0.03312700 -0.49308000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 9.49612875 13.27431454 0.54873253 9.70523978 3.82175103 11.07849116 3.42320165 NA 8.03523514 9.10715586 -0.03622997 7.69780509 5.60762918 10.76830716 8.85707436 3.60762622 9.95174732 9.87516478 10.94534002 11.11288476 11.22331303 7.26755359 9.91359943 2.77112495 5.42320501 9.50680463 2.54873253 -1.03622997 10.16037493 1.54873253 12.13963413 13.13916636 8.65900118 10.77273693 8.58765415 8.84946922 3.91796634 2.42320165 1.28569813 9.53552540 7.85251578 9.12616420 10.95103674 4.39003479 9.37497642 8.03255106 9.81161312 6.16344439 8.95529449 0.96377003 9.90702013 3.91796634 3.48733199 9.78776089 7.67839591 2.96377003 9.69084238 8.87965217 4.45562313 -1.03622997 13.13424554 0.96377003 10.10204459 NA 6.94105230 4.24917225 8.05652988 8.33227918 12.0502407 6.3984017 8.9651808 12.1939433 9.3752838 10.0472521 12.8845908 11.2143673 9.1889802 10.9428406 12.6378546 8.3235223 9.0591698 8.9106790 0.5487325 6.8585903 11.5576307 10.897463 5.705240 8.791909 7.958126 7.567399 10.488657 7.187775 9.787936 11.262694 5.809263 -1.036230 7.082714 7.209754 10.836063 10.857074 7.285701 8.163445 11.322699 6.864639 9.199787 9.945340 12.341254 9.583992 10.477007 9.098199 NA 9.126303 8.028650 5.338813 10.910679 8.596768 12.329822 10.376343 7.061805 12.570053 10.687434 10.289640 12.101404 10.830279 9.917242 5.153599 TCGA-BH-A1F0 80 1 785 NA breast stage iia t1a n1c m0 2-10-2014 female 2000 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 103.51.0 4 4 2 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.337367e-07 1.668684e-07 11.4129640 8.8921020 7.0213287 11.0545334 2.8703844 10.6193694 -2.2169206 9.7762167 11.0612287 8.1149609 9.3399094 8.7808094 8.8280016 9.9034863 7.2464489 10.1071050 8.3064865 10.6098701 9.6370135 8.2320731 9.5630540 10.5498673 11.9498720 10.4689872 10.6532892 10.4321806 7.3716390 11.1101921 1.5902906 1.9528554 10.1415756 11.6697641 12.2311053 8.5201720 11.6948781 11.5067986 10.3620046 4.5642867 -0.2170883 7.5805857 9.0642750 10.4692061 7.1944358 7.7371209 NA 11.8314113 8.0260985 8.3035433 9.6860531 9.8733677 8.5659227 5.8597410 -2.2169206 14.4187020 9.2133769 1.7829117 8.8252679 -2.2169206 6.5610022 10.3990137 10.3851593 9.3064865 10.5965052 10.5506950 9.7210337 1.3678742 11.3565716 10.2170313 3.7601997 7.9160663 0.1048734 11.2883639 14.6757874 7.5595874 11.3241421 11.4031442 10.8108304 3.7136628 NA 9.1371738 10.2500205 11.1522491 -0.2170883 2.3678742 7.4588815 10.9884122 11.3712877 4.8490134 8.4240730 6.8436209 11.6045988 11.7658289 0.9528554 13.4630641 3.4553469 8.1655482 11.3729266 11.8698070 12.8693510 6.0821320 10.5484177 10.8317519 10.6460479 11.1108980 4.9326707 7.7312919 12.2324600 9.1923153 0.3679301 10.5537948 9.8104849 4.8382055 3.2095313 10.0275855 9.5704189 9.9850482 9.1443200 15.0787472 10.6798244 10.6523255 5.9173506 2.6408985 13.2237375 6.5934957 12.8913264 12.9387704 9.5269172 9.5138190 8.5732730 9.8118733 0.1646700 0.1646700 0.2621600 -0.0164920 0.1306600 0.2019400 0.1663600 0.0164250 0.3636200 0.1257900 0.1257900 0.0183830 0.4990900 -0.0305400 0.0864340 0.0864340 0.0864340 -0.0769450 -0.0769450 -0.1179300 -0.0918160 -0.0758480 0.0555150 0.2797900 -0.0986820 0.0349590 0.0349590 -0.0278710 -0.0031859 -0.0339100 0.1646700 0.0580220 -0.0164920 -0.2327600 -0.2343500 -0.2392100 -0.2208400 0.0164250 0.0164250 0.0445740 0.0862330 0.0862330 -0.1930000 0.4510500 0.4510500 -0.0503700 -0.0503700 -0.0305400 -0.0305400 0.0864340 0.1114500 -0.0769450 -0.0769450 -0.0769450 -0.0239770 -0.0918160 -0.0666540 -0.0392260 0.0555150 0.2797900 -0.1044400 0.0349590 0.0349590 -0.0031859 -0.0118870 -0.0325870 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.252 0.252 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.252 0.252 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 10.1208251 12.5875596 4.4971716 9.5189035 5.9035252 10.5502813 5.6094743 7.7342090 8.6354540 9.0225229 NA 8.7105024 4.9528507 10.9564454 9.2387654 0.5902427 10.4568960 10.1541566 7.3317464 8.5419806 8.7709344 7.3809770 11.6508788 5.2258687 8.9352093 9.7210337 5.6158135 NA 10.8575676 1.9528554 12.8883419 11.9245526 9.1784585 10.5712349 11.4061201 9.2201563 6.3565717 4.5108480 NA 0.1048734 8.2081402 9.4420285 9.6260603 6.8756818 7.3155726 5.7017875 9.9739836 6.4553502 10.5239700 6.7602050 11.4617446 3.9528461 6.4729231 9.8716464 7.1668881 9.3641250 9.4209076 10.4170548 10.1410262 4.0308481 13.3081087 0.7829117 10.3753815 -2.2169206 9.4685493 5.7716083 8.4711749 8.8842435 11.115800 7.854387 8.785036 11.694878 10.050881 10.339909 7.737121 10.301086 9.328072 10.783629 13.876631 11.401654 10.250021 7.780104 4.068327 7.451810 11.638280 10.671287 6.415919 9.672809 8.297639 9.888833 10.061632 8.250530 7.107105 10.468987 5.843620 4.972748 6.149247 8.393894 12.319779 11.259418 8.142103 7.941534 10.763064 9.847667 9.306486 10.401769 12.071358 10.978450 10.457558 9.514243 6.531118 9.632697 8.550629 10.362240 11.371288 6.561002 10.679300 11.604599 7.844971 13.958766 10.392103 11.000428 14.058140 9.964698 9.776571 5.095806 TCGA-BH-A1F2 53 1 959 NA breast stage iiib t4b n1b m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 6 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 2 3 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.230962e-07 3.893595e-07 10.4400253 9.0249878 6.6122065 10.0380516 0.2903064 10.8999186 0.2903064 10.0130858 11.1667951 8.9706377 9.9068270 7.6099499 8.3428463 8.9967743 7.7639838 9.9997929 7.6301280 10.6214751 8.3469157 5.2210148 8.9627034 9.6505766 13.1908620 10.9162153 9.5529603 10.6772184 3.9341390 10.7468892 -1.7098115 2.8138325 10.1044601 11.9997928 12.8328869 8.8506110 15.3145197 12.8449869 9.2269162 3.8138427 NA 5.4899507 8.9287141 8.7781182 7.6522219 13.1592936 NA 10.9442428 13.0919360 2.6825958 9.1881237 11.0083829 10.1664114 7.5710488 1.8752296 12.9826893 6.2210148 1.2903064 5.6301288 -1.7098115 3.9627063 10.4250254 11.5011017 8.7165431 10.5241974 10.1633377 9.2682734 0.2903064 11.3058674 8.6267848 2.1971734 7.1759746 5.2091414 9.0164963 13.5920601 7.4166472 10.5756804 11.0763436 8.1667953 -0.1246917 -0.1246917 7.3015053 9.3502986 11.8093000 0.8752296 6.7538024 6.4751530 9.3697629 11.6124880 6.1911441 6.7821307 4.1231695 11.2202762 11.9659045 3.2444761 14.2836589 4.7165410 7.2930936 12.4476251 12.2309588 13.3756676 7.4652040 10.2768313 10.9776539 10.8070246 9.8381366 4.8601335 7.5710488 12.4626275 9.5238979 -0.7098115 9.8672349 9.0732764 -1.7098115 2.1971734 9.6290145 11.1259339 10.5997545 9.3968411 14.7444328 9.9582768 10.4770114 7.3563675 3.0976277 15.3377216 8.4272693 13.7830076 13.0785377 9.8270111 9.1247492 8.7771133 9.0327646 1.1885000 0.0931850 0.6273300 0.0754150 0.0734020 0.0037465 0.3743000 0.3813800 -0.4178400 0.4996000 0.4996000 1.2432000 0.3645700 0.3746700 0.3716600 0.3716600 -0.4587200 -0.0151910 -0.0151910 -0.0407520 0.4092800 0.0431570 0.4116200 3.6569000 0.7248900 -0.0634350 -0.0634350 -0.0634350 1.0870000 -0.8276500 1.1885000 0.2393800 0.0754150 -0.0459060 -0.0048461 -0.4276600 -0.4276600 0.3813800 -0.4178400 -0.4412200 -0.0245240 -0.0341620 -0.8711900 -0.4252700 -0.4252700 0.3448600 0.3448600 -0.4229800 -0.4465900 0.3716600 -0.4390600 -0.0151910 -0.0238070 -0.0238070 -0.0407520 -0.0465830 -0.3699700 -0.4275700 -0.4388600 -0.0920810 -0.0410240 -0.0634350 -0.0634350 0.3357700 -0.8598700 -0.0628980 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 7.5547208 12.6071253 9.2746966 9.5594048 2.2902769 10.4642675 -0.1246917 -0.7098115 7.3291972 7.9484899 NA 9.5860471 2.6122109 11.1947246 8.8771178 1.6122109 10.1088604 10.0613549 8.4948492 8.7781182 9.4828485 7.8563321 10.6823272 1.7003509 7.2239689 9.2682734 1.0976108 0.8752296 11.5091441 2.1971734 11.7512459 11.0397286 8.5974790 10.4243835 8.4131062 9.2016701 7.6456296 1.6122109 NA 4.4400220 6.7165424 5.5190984 11.1042597 6.6256679 7.0130859 4.6996682 9.8366904 5.8752394 10.4095436 NA 10.2881632 2.7497059 4.4602052 9.9679670 6.4131574 -0.7098115 8.5382056 9.3264517 1.9907008 NA 12.9287706 0.2903064 9.1490363 NA 8.8157989 5.3455596 8.8966833 9.1128489 11.786739 6.647830 9.280382 15.314520 9.810897 10.856094 13.159294 11.317147 8.657693 10.647555 13.895700 10.304647 9.350299 9.847263 NA 8.686883 12.384356 10.7540580 5.6565993 10.4856504 8.4985126 8.9603768 10.6757766 3.6122109 8.5298768 10.9162153 6.5664027 -0.1246917 6.1850954 7.2272694 11.2326094 10.6601481 8.0650655 6.1911441 10.6579660 4.8601335 8.7165431 10.5788559 10.7918666 9.0699975 10.4595769 8.9565022 NA 7.9465063 8.3082002 2.7497059 11.6124880 8.9529465 9.7934082 11.2202762 6.7578833 13.7776472 9.6943553 10.7507340 12.5526667 9.8591842 9.2888686 1.0976108 TCGA-BH-A1F5 62 1 2712 NA breast stage iia t1c n1a m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.668684e-07 9.4747116 3.5137813 7.8882544 10.1921202 -1.4402635 11.5146843 1.7294875 10.4456569 12.1056297 11.5848919 10.7369988 8.0087278 8.6927215 9.2106309 8.5888664 8.5805593 10.6377301 10.0205471 7.0190113 2.2600257 10.5275260 8.2337716 13.7724176 12.1814022 9.7895997 10.7586381 3.7295093 11.0159337 0.1445685 2.3669236 8.6135051 10.0200351 12.9848608 6.4175606 11.5833336 13.1187173 8.6875737 6.3539954 2.9519048 6.7295038 8.7407316 9.0604211 6.3077728 13.9382128 2.8815080 10.7453839 14.8724268 7.3893018 9.7623153 11.2068129 6.1742886 7.0353127 -1.4402635 12.1291857 5.7883986 -1.4402635 6.9604584 NA 3.0831453 10.7763251 11.0048528 10.9510914 11.7676612 10.0831413 8.2372989 3.6470381 11.9787495 8.8157880 4.5595775 7.0231034 6.1594919 12.4243458 12.8091372 6.7384936 11.5072162 11.7705550 10.5967830 NA 5.2874982 8.2959810 9.6377301 11.2708161 NA 5.6363955 6.5425723 11.3050435 11.3741618 4.3669376 5.8542002 3.5595775 10.9217971 12.1534372 -1.4402635 13.6928419 5.3669341 7.6811126 12.4753653 11.6036318 13.3993244 7.5425730 9.1862009 11.6260049 11.2447748 11.0549347 4.8075043 7.7518721 12.6291130 13.1666784 -0.4404592 9.7112301 9.7524885 0.5595408 1.1469158 9.7931990 11.0423872 10.9761129 9.4322542 14.3798829 10.2733954 11.6015806 8.6523363 2.8815080 15.8797187 8.0634048 14.0010970 12.6395640 10.0875449 9.5239202 8.1576319 9.3903242 0.0000000 0.0000000 0.0000000 -0.0388030 -0.0766490 -0.0128040 0.0021282 -0.5288600 -0.8211100 1.6189000 1.6189000 1.6088000 0.0180110 0.0119140 -0.0046603 -0.0046603 -0.0046603 0.0082437 0.0021282 0.0062959 0.0107510 0.0076870 0.0324700 0.0324700 0.0324700 0.0238950 0.0238950 0.0238950 0.0156350 0.0000000 0.0000000 0.0075479 -0.0388030 0.0033776 -0.0128040 0.0021282 -0.0024457 -0.5288600 -0.5221200 -0.5399300 -0.0016152 -0.0016152 -0.8583400 0.0035165 0.0129820 0.0129820 0.0129820 0.0119140 0.0175920 -0.0021692 -0.0046603 0.0082437 0.0021282 0.0021282 -0.0045338 0.0107510 0.0076870 -0.8326500 0.0324700 0.0324700 -0.0192670 0.0238950 0.0238950 0.0156350 0.0038303 -0.8995100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 7.1816313 10.8012646 7.9668469 8.4649663 3.6888629 9.6209505 1.5595897 NA 7.3211308 6.5930026 NA 7.6523366 -0.4404592 10.5988411 9.5468433 0.5595408 7.6888622 9.6450517 9.5130483 9.7469313 9.5083116 7.7690325 8.3781613 -0.6084522 9.2874998 8.2372989 5.1889350 NA 9.7388664 3.6039764 12.1710652 11.4782562 7.7016863 10.7332565 7.8656411 8.6654876 5.1889350 NA -0.4404592 4.0514330 7.3893018 4.0831453 10.7469314 4.0514330 6.9606716 5.6363955 10.7376216 6.8815068 9.7376215 NA 10.3343664 0.1445685 4.1141671 10.3442100 6.0238386 4.2320083 9.0693542 7.0792160 4.7494055 NA 13.0890098 0.8815080 8.9259015 0.5595408 8.0251457 4.8815080 8.6523363 8.7859915 14.7471011 5.2320045 9.4299440 11.5833336 9.9259015 10.3552131 13.9382128 12.4955730 9.1686195 10.8941319 12.9641222 9.9631240 9.6377301 8.6377301 0.1445685 7.7269974 13.5817737 10.3470737 9.1360637 10.1975626 9.8015624 8.0948547 10.6017208 2.7295093 8.8003706 12.1814022 5.9259021 1.5595897 4.0514330 6.7497984 10.0241250 10.5840264 10.7090088 5.8904953 12.6071292 4.8633587 10.9510914 11.3833445 12.5201243 9.0322700 10.4825353 9.2934420 -0.4404592 8.0470574 7.0789407 5.7690338 11.3741618 7.6363948 9.9340755 10.9217971 6.8724619 13.0524339 10.7917004 11.2092845 11.9347545 9.4237653 9.8391899 3.3144645 TCGA-BH-A1F6 51 1 2965 NA breast NA t4d n2a mx 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 6 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.78719e-07 5.284165e-07 11.9053593 5.0851824 6.8577696 13.2271456 -1.0846703 10.0354933 1.5002412 9.0458260 11.4023417 8.6567223 9.3107895 8.8236481 8.8694516 10.6709775 5.4544128 7.6834396 9.8989615 10.5872387 8.7047890 7.0548072 9.9623793 11.9327598 12.8821213 10.2722575 9.8665401 10.1667378 6.6087427 10.0926562 7.6834396 3.1631767 8.2006574 9.4879556 11.1174404 7.7290368 11.7453744 12.1007503 10.1542571 7.4582868 4.8694520 11.1389555 8.7047890 9.6069988 5.8925343 4.8925367 -1.0846703 12.6212117 8.4524739 6.7732368 9.2900776 10.4255251 6.2815777 5.7607452 -1.0846703 13.4860231 9.0263909 3.7732368 8.2528773 4.0445428 6.3990719 9.0976498 10.7181755 9.2064261 10.4988083 9.4650400 10.0146032 1.2371966 11.2728074 10.2706065 3.5591124 6.3498836 NA 7.7638783 14.6281585 7.2774185 10.5202719 10.2360559 9.0700734 3.9152532 0.5001902 8.4071084 9.1295746 10.4992784 NA 2.0851867 7.8665402 11.1569407 10.0845541 5.0027160 6.6567223 4.5299646 10.1440740 11.8140457 -1.0846703 13.4807740 2.5002157 6.4851112 10.3925077 13.4522310 12.0198541 6.1820427 10.6575648 10.8134788 10.4254262 10.7634871 4.8459918 7.9152556 11.7583913 8.4698441 NA 10.3767348 9.5446119 3.5591124 2.3746778 9.7201931 10.9954067 10.1691029 9.4020905 14.8051871 10.3894683 10.3262367 5.2190368 1.7225972 12.6999924 5.5876800 12.7817616 11.9524591 10.3011178 9.1796979 7.4427321 9.9476456 0.0197830 0.2715900 0.2383800 -0.0875790 0.0625080 -0.3397000 0.2326000 -0.0146410 0.3715000 0.0736970 0.0736970 1.0403000 3.6569000 -0.0172540 0.2974000 0.0239870 0.0079175 -0.0718730 0.3841900 -0.4088100 -0.3473300 0.3339900 -0.3644200 -0.3644200 -0.3644200 0.0988510 1.8408000 -0.2458200 0.3186700 -0.0103700 -0.3422800 -0.3530500 -0.0750450 -0.3988600 -0.3353700 0.3135800 -0.3427400 -0.0146410 0.3713400 -0.0410240 0.2815300 0.5537200 -0.7962000 0.9904800 0.9904800 -0.0881090 -0.0881090 -0.3687300 -0.4201400 0.2875400 0.0079175 -0.0557060 -0.3668000 -0.3931900 -0.3396400 -0.3579500 -0.3678200 -0.0817380 -0.3644200 -0.3644200 -0.1817800 0.0988510 -0.2251500 0.3106500 -0.0099565 -0.0690640 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 8.4563520 12.2559400 3.5591124 8.5077126 2.0851867 10.4950427 2.2371966 8.2506457 9.4040997 7.2506461 1.2371966 7.6651916 2.5002157 9.9691813 9.1186035 1.5002412 7.5841402 11.5156329 8.1198267 8.5482505 9.2281725 6.9376233 10.7338376 2.7226190 9.6575648 10.0146032 6.0851803 NA 10.0732338 2.9152532 13.4425491 12.6480588 7.5698913 10.4000783 10.1826273 11.8502362 2.0851867 1.7225972 -1.0846703 0.5001902 8.6516574 8.7513057 7.8867989 3.8694470 8.5595805 7.5373069 10.1186033 6.2551060 9.5663072 1.2371966 10.6520801 3.4388118 5.0650035 10.5170261 8.1698118 7.8606990 8.9110225 8.8146123 9.1038443 6.2371832 13.1357849 1.2371966 11.0309493 NA 10.2978794 7.3498836 8.5859116 8.6087424 10.657565 10.105080 8.454414 11.745374 9.822897 11.375967 4.892537 11.689631 8.922283 9.849683 13.329809 12.702342 9.129575 7.948679 2.374678 7.034196 10.743392 10.769345 5.709671 9.375711 8.756033 8.403096 9.848363 6.551880 6.349884 10.272257 10.475588 NA 8.511445 10.266261 12.107086 10.096408 8.107548 9.146477 8.283762 8.072602 9.206426 10.317735 11.837282 11.062460 10.555048 9.239436 7.442732 9.804508 7.851157 8.743392 10.084554 5.857770 10.933456 10.144074 6.676806 13.783306 10.997404 10.653348 12.551427 11.588123 9.169103 3.500216 TCGA-BH-A1F8 89 1 750 NA breast stage iiib t4b n2 m0 2-10-2014 female 1999 NA NA infiltrating ductal carcinoma yes 12 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.226197e-06 9.713281e-07 12.0764367 3.8547537 9.0238763 10.7204243 -1.7888632 10.0182517 2.1177948 10.8722295 11.1130834 7.1766808 10.3634985 7.8547531 8.6795209 9.6891608 7.4105692 10.2983597 8.9724480 10.0422040 6.8402530 2.6703192 9.0302776 7.5032183 14.4565052 11.0481305 9.2214250 10.3723436 4.2332669 11.2465551 -1.7888632 -1.7888632 7.6886553 10.9860955 11.2808500 8.5978369 12.3632609 12.8885614 7.0750833 6.0812608 2.3808126 7.6744211 8.1650929 6.2877124 6.5902756 12.7172663 4.5328219 9.5902751 13.3797647 2.2108875 9.0222715 11.2660097 7.6202880 5.9113369 -1.7888632 14.9112984 5.9388174 -0.7891125 7.1534112 -1.7888632 3.8547537 11.3573063 11.2388028 10.2759763 11.3396967 10.9298577 8.8024191 NA 13.2580207 9.0174465 4.6371639 7.9641133 NA 11.7199295 13.5718467 7.0182514 11.1041983 12.2035696 8.1490063 -1.7888632 3.6371581 8.3707680 9.7265966 11.6646818 NA 5.5946023 6.9790810 10.3321065 11.0008379 4.9113369 5.3401813 2.2108875 10.9464528 11.6304620 4.7027517 13.6753787 4.8108081 8.1147788 11.3049745 12.7245627 13.6531600 8.2675344 10.6178989 11.0824171 10.1233483 10.1545104 5.3298376 8.1401554 12.2017985 11.4533266 NA 10.0665440 9.6957197 0.2108875 1.9700438 9.0085583 10.7599594 10.5401325 9.8361490 15.8148708 10.0916282 10.6279581 7.8850893 4.2552892 15.1887133 9.2010008 13.2143268 11.3248017 10.2893812 8.5451699 8.3102447 9.1477776 -0.7559000 0.0047171 0.0555130 -0.7491600 0.0410320 -0.7485700 0.0285550 0.0358040 0.0323800 3.6569000 -0.7664600 0.0383460 0.0516700 -0.7463800 -0.0310310 0.1086200 2.9430000 0.0319980 0.0319980 -0.7664600 -0.7645700 0.0406070 -0.7769400 0.0119560 0.0119560 -0.7358200 0.0051340 0.0000000 0.8223500 -0.7559000 -0.7559000 -0.0045714 -0.7491600 -0.7485700 -0.7411600 0.0285550 0.0285550 0.0358040 0.0323800 0.0723950 -0.7602100 0.0532110 -0.7820400 -0.7572000 -0.7572000 -0.7572000 -0.7572000 -0.7463800 -0.7592600 -0.0121640 -0.7206600 0.0319980 0.0319980 0.0319980 -0.7650100 -0.7645700 0.0406070 -0.7469900 -0.7769400 0.0119560 -0.7586600 -0.7358200 0.0000000 0.7995600 0.0270740 -0.7550400 -0.746 -0.746 -0.721 -0.721 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.776 -0.776 -0.757 -0.757 -0.611 -0.746 -0.746 -0.721 -0.721 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.776 -0.776 -0.757 -0.757 -0.611 7.5772188 11.7585143 8.2010006 7.8493325 1.9113464 10.6316465 0.2108875 NA 8.0719836 7.5462872 0.7958500 8.2740356 2.3808126 11.5026431 8.1192892 -0.7891125 7.1853116 10.3304864 5.5859360 9.1730697 9.7627924 7.8511419 8.9328505 -1.1019078 4.9388174 8.8024191 NA -1.7888632 8.9173927 2.9657843 11.5003393 12.2036581 7.6846028 11.1357093 12.1360803 9.5328248 7.2715928 1.3808403 NA -1.7888632 6.7422784 5.0563884 9.7745698 3.2552892 7.9632441 7.6579801 10.5568563 6.3504477 9.9836237 NA 9.6010658 2.2108875 4.1177865 10.5696331 5.9890391 5.2877124 9.4367068 7.4540706 7.2249172 NA 13.4056536 1.0182781 10.4890558 NA 8.3770600 4.1177865 9.0429956 8.7127340 13.310980 7.786436 8.359374 12.363261 9.103440 11.292380 12.717266 10.348849 11.150109 11.195849 12.744105 9.820537 9.726597 8.390806 NA 8.368244 11.808600 9.545729 8.571744 9.071984 7.950677 9.772185 9.561875 3.255289 8.067322 11.048131 6.734459 2.670319 3.340178 6.941808 9.782175 9.133481 7.670328 7.096593 12.825434 5.904383 10.275976 10.442418 12.480170 7.780752 10.188534 9.282359 4.420348 8.291754 7.591423 6.249815 11.000838 8.098117 9.591358 10.946453 6.792098 12.181182 10.336310 10.723637 12.959352 8.714723 8.814523 1.532816 TCGA-BH-A1FB 60 1 3669 NA breast stage iib t2 n1b m0 2-10-2014 female 2000 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 2 5 NA NA 3 3 2 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0181761 9.5151652 7.4039255 10.8141105 1.9319477 11.0299698 0.2315553 10.3497903 11.7481830 9.9249850 9.6103348 8.0484814 8.7213460 9.5041278 7.1141411 9.3989162 10.0307797 10.0408642 8.6472397 5.1141421 10.3652824 10.1018628 12.9853938 10.6957886 9.8576633 10.6002773 7.3189612 10.8110403 -0.1836051 1.8164768 9.8145809 13.2873736 12.9370764 7.4651174 12.3857624 12.2262934 10.1611263 5.5443803 3.1383885 6.5076218 9.3678485 10.0157239 8.5691200 12.3523839 4.5168976 10.7158175 12.6487572 6.8897096 9.4266858 10.8383659 6.7233510 6.7511343 NA 13.8920882 11.5426688 2.5534342 8.4026749 0.2315553 5.7783926 10.2517836 10.3923150 10.2037600 11.4356106 10.4838679 9.9517424 4.3189603 11.9420893 9.9315042 6.3189603 8.2704168 9.8906020 11.2258515 14.6664357 8.3079530 12.0070055 11.6610355 9.3196238 2.2314939 3.4014257 8.8870286 9.8603992 12.5908358 -1.7685676 4.7706546 6.8608548 10.2155604 11.5764874 8.1871482 8.0754192 5.4311716 10.5846449 11.7594637 -0.7685676 13.5600327 5.2087787 7.5579277 12.4673627 12.5624849 13.0655246 7.6021852 10.2162725 11.2493504 10.9949469 11.4216314 5.4311716 8.0848079 12.0515773 11.8406768 -1.7685676 10.3403492 9.7303472 3.0388576 3.5461907 10.3552961 10.8091629 10.6561892 9.3875812 14.6701600 10.1022480 10.5959063 8.0516772 4.2315015 15.2777801 8.5215168 13.8093104 13.2616910 9.9210593 9.2948932 8.5556785 9.5480680 0.00194180 0.00194180 -0.00235530 0.00291330 0.00016166 0.00000000 -0.02288100 0.00000000 0.00000000 -0.19149000 0.34177000 0.34177000 0.00097064 0.00097064 -0.00563430 -0.00563430 -0.00563430 -0.00290910 -0.00290910 -0.00415460 -0.00025454 0.00833510 -0.01105200 0.00416320 0.00416320 -0.00622860 -0.00622860 -0.00622860 -0.00470790 -0.00512270 0.00194180 0.00527490 0.00291330 -0.00678580 0.00000000 -0.03142100 -0.03142100 0.00000000 0.00000000 -0.00215010 -0.00401620 -0.00401620 -0.19149000 0.00432520 0.00432520 0.00432520 0.00471900 0.00097064 0.00097064 -0.00563430 -0.00563430 -0.00290910 -0.00290910 -0.00290910 -0.00415460 -0.00025454 0.00833510 -0.18169000 -0.01105200 0.00416320 -0.00041585 -0.00622860 -0.00622860 -0.00470790 0.00097064 0.00166420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 10.4179218 12.7971357 9.3652824 9.9996824 5.6744409 10.2642326 5.2975876 1.2314939 8.0128580 9.2607853 -0.1836051 8.5528961 3.9863836 9.9901377 9.0508788 3.2314939 10.4482439 9.5923451 10.1721787 9.7535892 9.2620065 8.3799748 10.4561027 4.0894812 9.7173274 9.9517424 5.8388283 NA 10.3960908 4.8462075 12.9926857 11.9285742 8.7432507 10.5312784 8.4188502 8.8498836 6.4794262 1.9319477 2.0388576 1.8164768 8.4385124 8.5375597 9.8526342 6.0323984 8.1094415 6.1202420 10.3006121 6.5713476 9.7158175 -0.7685676 11.2119947 4.9594178 5.2975876 9.6350907 5.0329163 7.2510885 9.7486752 8.7442385 7.7956475 -0.7685676 13.7358826 1.5534097 10.1637128 NA 8.4385124 5.3295291 8.1577941 8.8126988 12.216003 4.831411 9.005461 12.385762 10.534217 10.125558 12.352384 12.075419 9.335441 11.348329 13.554201 11.217340 9.860399 8.322934 -1.768568 7.743250 11.155011 11.242900 7.098776 9.372328 9.105711 8.192948 10.372075 8.200165 7.668210 10.695789 6.431170 6.360780 6.812698 6.745423 12.553215 10.777910 8.841600 7.849884 12.114237 8.410163 10.203760 10.524107 11.825239 10.183875 10.531565 9.674442 6.842523 9.465238 8.286129 7.831411 11.576487 8.203042 10.944240 10.584645 7.371049 14.054641 9.988888 10.602458 13.314146 10.306977 9.917561 2.875348 TCGA-BH-A1FC 78 1 3472 NA breast stage iia t1c n1b m0 2-10-2014 female 1998 NA NA medullary carcinoma yes 1 black or african american not hispanic or latino 109.61.0 NA NA 5 1 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.873276e-06 2.42832e-07 12.3090536 NA 4.6612593 12.1175433 NA 11.1043968 1.4049031 9.4155265 12.4007664 9.2566699 10.5507114 8.3251080 8.5169256 9.9509578 8.1701609 8.5157665 8.2983907 9.6143742 8.4959154 4.3435215 9.7348417 11.2479694 12.0908376 10.5073339 10.3051167 10.5614252 7.9458020 10.3317109 2.8199542 2.2349917 8.5410575 9.9113936 12.6785869 6.5342033 10.8190187 11.7136390 9.4888431 7.3037744 4.1657351 9.4912045 9.2293493 9.0261588 6.3382836 5.1418864 NA 13.0249878 7.0358955 8.7288511 9.2321753 11.1549764 7.2902779 5.9898838 2.6273033 14.2044290 11.8498206 0.5568953 11.2199482 2.5569198 7.5227078 9.2328809 10.6248960 9.7953286 10.9988306 9.2243903 9.4401782 2.2349917 10.7746392 11.6149156 3.2349917 7.2848445 -0.1800049 10.2000585 14.2396332 8.6727895 12.0495782 10.7064169 11.2245677 1.6944345 -1.7651308 7.2378103 9.3057875 9.6969866 NA 4.5017831 7.0804861 12.0310353 10.5552322 5.1775112 7.5837237 6.3847423 8.3264313 12.3605707 NA 13.9601756 2.3224474 6.6737882 11.0655110 14.0333663 12.4221932 5.1418864 10.4389554 11.6168091 11.2855332 11.6401372 5.4149034 8.3303926 12.1626811 9.6959635 -1.7651308 9.9140360 11.1396304 2.4829257 2.3250122 8.8625295 8.8761443 9.2058206 8.7046375 14.4679225 11.2911254 10.5784591 5.4149034 2.6273033 13.3748269 4.7427877 12.7455127 11.3909207 10.4962092 8.6024105 8.3872807 11.0805681 1.977100 1.880100 1.303300 0.164900 0.134650 0.213300 -0.519180 0.781760 -0.200000 1.002200 1.002200 1.459200 1.491600 -0.178730 -0.529810 0.195880 0.195880 0.174680 0.153050 -0.511660 -0.183330 -0.530420 2.550100 0.144880 0.586320 0.848690 1.116400 0.089996 -0.158350 1.471800 1.823300 -0.175750 0.163700 0.350390 0.270480 -0.213170 -0.225520 0.903510 -0.200000 -0.187730 -0.069198 0.144440 -0.954570 0.871050 0.871050 0.871050 1.150600 -0.165610 -0.147470 -0.529810 -0.539660 0.155020 0.153050 0.302980 -0.879300 -0.172650 -0.522460 -0.525320 0.131030 0.144880 0.013353 -0.552360 -0.244720 -0.545980 0.538370 -0.539970 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.586 0.586 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.235 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.586 0.586 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.235 9.5642314 11.8628716 1.8199542 9.4529535 2.0423642 10.6657096 1.5569444 0.2349917 9.2406203 9.1351077 2.4829257 8.3435202 0.2349917 10.5633902 9.7363353 3.9074195 3.4049167 10.1478851 6.9074207 10.1263998 8.6077194 6.6862064 10.1712656 2.3224474 10.4226571 9.4401782 2.1418905 NA 8.7157860 2.0423642 12.3237840 11.9385749 7.8552155 9.5563602 8.9171125 10.7595375 3.4049167 2.8199542 NA -0.7648857 9.8575052 8.6401372 8.2970419 -1.7651308 7.6614282 7.8143120 10.6010447 4.2122736 10.9749873 -0.7648857 13.0417468 5.4829225 4.0423467 9.7889993 5.8882002 9.5313384 8.1433883 7.7702714 11.1986143 6.0097838 14.0252424 -1.7651308 10.5617061 -1.7651308 9.7318495 3.1418905 8.3277529 8.0064854 11.342440 8.850625 8.518084 10.819019 9.577626 12.162218 5.141886 10.303774 9.157580 10.765158 14.894128 14.023663 9.305787 8.370705 3.092969 8.186281 11.584830 12.0404373 6.8274532 8.3796539 9.2448243 9.4011588 11.6752719 7.3898137 6.5064591 10.5073339 10.6345407 0.5568953 2.8199542 9.8833309 12.2498880 12.3471094 8.9206205 8.3224586 7.6165386 9.7962837 9.7953286 10.3885478 11.8322336 12.6792989 11.4265177 8.3077983 NA 8.9921107 6.7188109 10.1516217 10.5552322 6.4734005 12.2528098 8.3264313 8.4674168 14.3588343 11.8843642 9.8062744 13.1803939 11.0415454 10.0527789 5.8124238 TCGA-BH-A1FD 68 1 1009 NA breast stage i t1c n0 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 5 3 NA NA 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.449823e-07 1.39057e-07 11.4906555 1.6736921 5.3017047 11.1207550 -0.2007469 10.5028180 NA 9.8549371 11.9718386 7.0968838 10.6805716 7.9077271 7.4903647 10.1807457 5.7220342 8.7707461 10.2022147 9.6103097 7.0086561 2.0215863 10.5998331 8.8742360 12.2596586 11.0859530 9.8853390 10.2933916 4.0215952 10.5984816 NA 2.6065607 8.1698899 11.0228023 13.0587008 8.2156485 10.7637843 12.2493830 8.4466611 6.2310483 3.3017047 7.0151396 8.0070306 8.5054110 7.4692690 12.5852681 -0.7858752 9.2442175 12.9262835 6.3639875 9.4460794 11.3297716 5.8866648 8.1986587 2.3017047 13.3316824 10.6654513 0.2142492 9.0487114 NA 3.3841604 10.5965941 11.2315706 9.5734408 10.1064035 10.6212424 9.2668083 -1.7858752 12.1231957 10.2923910 5.7688301 7.2000825 0.7991702 10.8234190 14.1459934 7.2077162 11.0691086 10.1181221 9.8607990 2.6065607 5.9691275 9.3460973 9.1203792 10.9550750 -0.7858752 5.8652928 7.3866678 10.5599227 11.5909083 6.4669060 6.3383620 5.5805616 10.0726098 11.6538114 -0.2007469 14.2944956 5.2366074 7.5451568 12.3893219 13.0084022 13.2980519 7.3227646 10.4707438 10.8888739 10.3950973 10.8569689 5.3017047 9.1552878 11.7229016 11.0609059 1.0216219 10.4606839 10.9425859 NA 2.6072474 9.1271295 11.1455318 10.1364529 8.8399492 15.6824904 11.5451571 10.3221111 7.3305844 6.7649870 14.5643507 9.6823551 12.1838965 11.4729535 10.0419798 8.8553890 8.2963895 9.8457311 0.0324020 0.6368000 -0.7904400 0.0841890 0.0000000 0.0062286 0.0331070 0.0286020 -0.7873900 3.6569000 0.8555800 3.6569000 0.1458200 -0.0943460 0.0432790 0.0432790 0.0432790 -0.0226960 0.0088725 -0.7797400 0.0503720 0.2042500 -0.7436100 -0.7727900 0.0432790 -0.0442990 -0.0442990 1.4371000 0.0129150 -0.7822800 0.2155800 0.1875000 0.0841890 0.0196230 -0.7734700 -0.7973800 0.0165460 -0.0080437 -0.7873900 -0.1785500 0.8360600 -0.0248170 -0.6634800 0.0200430 0.0200430 -0.7689500 -0.7689500 -0.0943460 -0.0943460 0.0468220 -0.6661300 -0.0226960 0.7711500 0.7398500 -0.1933900 -0.7716000 0.0121550 -0.7532400 -0.7841300 -0.7727900 -0.0744290 -0.0442990 -0.0442990 -0.8067200 0.0271970 -0.5931300 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.773 -0.773 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.773 -0.773 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.345 8.1626073 13.0378065 6.4188106 8.5282568 4.0722173 10.4603870 -0.7858752 NA 8.4633535 7.2393799 NA 7.9637244 3.1684334 11.1056442 9.6038717 -1.7858752 7.1420182 9.0045887 9.4786829 9.7802942 9.1396537 6.8866660 10.0718325 2.3017047 10.4151388 9.2668083 1.6736921 -1.7858752 9.6092388 0.5361524 12.9514876 12.2536734 7.0597306 9.0296235 9.8531286 9.9894389 4.6236328 1.0216219 0.7991702 7.3563472 9.4273445 8.5706921 10.2867078 2.2142492 7.3915847 6.2803291 9.6415531 6.9146805 9.5601998 -1.7858752 10.6633888 3.7688301 3.7378057 10.1063732 7.1635420 0.7991702 9.5259886 7.9215994 9.8800203 0.2142492 13.7397305 -1.7858752 10.1431287 NA 9.1113292 3.7060884 7.8831253 9.0078436 13.421947 6.418811 8.508861 10.763784 9.737802 9.785045 12.585268 11.813107 9.326680 11.216000 13.432993 11.944073 9.120379 7.239380 1.536152 7.153820 11.845076 10.1961643 7.4454610 9.9133788 9.6336737 8.3766316 9.0516160 6.3435233 4.6899756 11.0859530 8.0799732 6.6571841 7.3096373 7.7776847 10.2373015 9.4460614 7.7259926 8.9824247 13.3219886 4.0215952 9.5734408 10.0324230 11.0238074 8.7407394 10.0017347 9.1857838 5.3537926 8.5286080 7.4532896 2.9146793 11.5909083 8.0232043 9.7856184 10.0726098 7.9319164 13.8911615 10.0834485 10.2435275 12.3274940 10.2678267 8.6869312 0.5361524 TCGA-BH-A1FE 31 1 2273 NA breast stage iib t2 n1 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 109.61.0 NA NA 2 5 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.781139e-07 2.781139e-08 10.9334643 8.3672553 7.7567678 10.4266194 1.5669612 10.9817247 NA 10.5329900 12.1906587 7.2673832 9.9596512 8.1546359 8.7683991 9.4072922 7.2948642 9.9007086 9.6995017 10.1378341 8.2998047 4.6621029 9.8711392 9.7060297 13.6428783 10.7355016 9.7111381 10.6988004 7.5607822 10.8311728 0.4294285 1.5669612 9.6563337 13.2570605 13.1633026 7.6133232 12.8179416 12.9601876 8.9747906 6.0617071 2.2774492 6.3022679 8.8839449 8.3589944 8.4440185 12.4327470 0.9148706 10.5065227 13.5662068 4.0617071 8.8481359 11.3400826 5.8623993 5.2470616 0.1075540 13.9325521 8.2559883 4.2774343 10.0400957 -0.8924460 4.8079525 10.6103436 10.7233714 9.8096845 11.9317745 10.2852428 9.9557435 2.9148706 12.2281547 9.4971431 3.9901562 7.5587230 11.5538198 10.1061023 14.7125862 8.9339650 11.7126441 11.9969207 9.2667526 0.6925165 4.1949774 8.8062164 9.9019278 11.9469125 -0.8924460 5.0263752 6.3601781 10.4454124 11.5919571 6.3836369 7.8557045 4.5337751 10.4220950 11.7537330 1.8079319 13.3390705 5.5751187 7.4933743 12.5920830 13.3807246 13.1539964 7.5316778 10.3381328 11.3306085 10.6917862 11.4408069 5.6388934 8.1423108 12.2933939 11.9069958 0.1075540 9.8888715 9.6118343 0.1075540 2.6936765 10.0315820 10.7261268 10.1025723 9.4232275 14.8777886 10.1597402 10.4420644 8.2899064 4.0847956 15.4419946 8.8937814 13.4551678 12.7489427 10.3426285 8.9530018 8.8009989 9.5686689 -0.1458100 -0.1458100 0.0084743 -0.0679930 -0.0679930 0.0000000 -0.1634500 0.7047600 3.5828000 -0.1705600 -0.1637000 2.1159000 0.0252500 0.0111210 0.0158660 -0.0290740 -0.0290740 0.0192230 0.0192230 -0.3934100 -0.0790770 -0.0487480 -0.3883900 0.0171240 0.0171240 -0.1380700 -0.1380700 -0.0914200 0.7742500 -0.1541400 -0.1458100 0.0101780 -0.0679930 -0.0240590 0.0000000 -0.2072800 -0.2072800 0.0334080 0.2373600 -0.1411600 0.0066653 0.0066653 -0.1349700 -0.0746780 -0.0746780 -0.3489300 -0.0026322 0.0111210 0.0111210 0.0158660 -0.1874800 0.0192230 0.0192230 0.0192230 -0.3877200 -0.2627600 -0.0487480 -0.3765100 -0.3883900 0.0171240 0.0043021 0.1411700 -0.0914200 0.0210480 0.0304510 0.0318590 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 10.2361507 13.0830016 8.7666157 9.7931367 5.5002571 10.7944500 4.4825515 1.6924718 7.9132557 9.1243201 0.1075540 8.9853558 1.2774492 10.4356257 8.8191789 2.7513780 10.8779693 10.1138379 9.4429022 9.0536870 9.2823814 8.4395483 10.3657834 3.7222256 8.0675140 9.9557435 5.9654934 NA 10.0408337 3.3169711 12.6865331 12.1727596 9.0740173 10.3260751 10.0200269 8.9292859 7.1682078 0.9148706 1.2774492 2.6310810 8.0426766 6.3696061 10.0682378 4.9778752 8.6125792 5.6621001 9.6985666 6.6849407 9.6990341 NA 9.9893905 3.9654888 4.7222201 9.9774102 6.2069128 6.3411318 9.3992581 8.1976241 7.7295636 -1.8927139 13.4916210 1.4294285 9.5237815 NA 8.0847919 5.4473610 8.0573387 7.1789745 12.303759 6.499830 8.925295 12.817942 9.728190 10.364310 12.432747 11.656093 9.437308 11.363721 13.521503 11.350090 9.901928 9.527998 NA 7.331514 12.315899 11.385671 6.769290 9.069685 9.501439 9.944351 10.473987 7.619265 7.247064 10.735502 4.821756 5.533775 6.478198 7.729912 12.323424 10.749564 8.577153 6.821757 12.182489 7.840527 9.809685 10.675706 11.326226 9.310248 10.953198 9.548900 8.027865 8.523486 8.761584 7.988626 11.591957 8.145059 11.064654 10.422095 7.644730 13.695699 10.109624 10.354549 13.091797 11.258052 9.800127 2.355439 TCGA-BH-A1FG 88 1 3738 NA breast stage i t1c nx m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 1 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 8.343418e-08 10.8378633 4.9520586 6.8825183 10.9752103 NA 10.4302698 -1.4571972 9.6006600 10.9845751 10.1833652 9.6214863 7.0934155 8.4420254 8.7398852 7.7905961 9.3322020 10.0764848 9.0264842 7.0972568 3.6301259 9.8395846 9.4014265 14.0457177 11.3405325 9.6738823 10.4682228 4.4734038 10.4457970 -1.4571972 2.1276333 6.7472397 9.2756836 13.1125240 6.5925168 12.8043960 13.0714887 9.9799003 6.6459567 3.2975583 7.2396358 8.0365237 10.1049108 5.5313534 13.2537438 2.7125958 9.8532812 14.0703595 2.1276333 9.4397499 11.3692169 8.4405137 7.9435481 0.1276333 13.7883236 7.7834599 0.1276333 7.1163159 NA 2.5426790 9.7349612 9.8303807 9.7762881 11.1476849 9.7953338 9.2534748 NA 10.8088693 9.2088923 6.5370211 7.6485769 0.1276333 12.6962996 13.7499878 6.7001165 10.5174415 11.1899019 8.3580516 -1.4571972 4.9002196 6.4006489 8.9187938 11.2261016 -1.4571972 3.8645923 7.3787188 10.2676085 10.8112103 7.1720254 4.5426667 3.4968586 10.5402007 11.6944777 -0.4573952 13.8280345 6.1499991 7.6114468 11.9972247 11.0440080 12.7147052 7.8913967 10.5685001 10.8152982 10.6799798 10.2296065 4.2150961 8.3256666 12.5189640 11.6057263 1.7125958 10.1425812 9.8510074 -1.4571972 1.7691793 9.0464941 10.1346581 10.4168813 8.9349858 15.5855568 10.6151360 11.3940270 7.8326875 1.3500446 16.5809390 8.8969178 12.5476788 11.4072415 9.7435670 8.8836312 7.7810731 9.7133071 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 -0.00761010 -0.00346270 -0.00443120 -0.04793600 -0.90449000 2.94200000 2.91690000 0.02132300 0.00973770 -0.00304750 -0.00083160 -0.00083160 0.01279500 0.00097064 -0.00567570 -0.05671200 0.02146300 0.86572000 0.86572000 0.86572000 0.01433000 0.01433000 0.01433000 0.00069327 0.00777830 -0.00567570 0.00097064 0.00000000 -0.00761010 -0.00830050 -0.91026000 -0.00567570 -0.00443120 -0.04793600 -0.04793600 0.00221930 -0.00761010 -0.90449000 0.00263570 0.00263570 0.00263570 0.00680440 0.00973770 0.00973770 -0.00304750 -0.00083160 -0.30545000 0.00097064 0.00097064 -0.00567570 -0.05671200 0.01642300 -0.91793000 -0.88031000 0.86572000 0.08782400 0.01433000 0.01433000 0.00069327 0.01363200 0.02820000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 7.3596521 10.6783777 4.2150961 8.5884279 2.2771218 10.0259803 0.5427038 -0.4573952 7.9478099 6.6407005 NA 5.9856120 1.7125958 10.8295149 9.0284976 1.1276333 6.9089906 8.3108527 9.5594767 11.1462947 9.6269585 8.0623047 9.6796595 2.6301259 8.4022033 9.2534748 3.8645923 3.5426667 10.1941686 3.0662270 13.4890264 12.4718343 7.2291687 11.1099115 9.7355775 9.7392704 2.0020904 -0.4573952 NA 0.8645725 9.1874261 8.8880735 11.1006106 4.0972568 7.7718717 6.4555574 10.4195690 4.6301317 10.5475910 NA 11.0755113 -1.4571972 2.7906052 9.9505840 5.1504419 2.9349882 10.1792930 7.1276312 5.3500233 NA 13.7935219 1.1276333 9.9799003 1.3500446 8.5341900 3.8645923 8.3612508 9.7175940 13.314419 4.297558 9.267182 12.804396 10.243975 10.498318 13.253744 12.314261 9.320746 10.403367 12.132671 9.674525 8.918794 8.783460 -1.457197 7.878059 12.009255 10.3083688 7.9752100 9.4961373 8.8980194 8.4585477 9.8267638 4.4968650 7.6924153 11.3405325 5.0184027 -1.4571972 3.3500163 7.5194900 9.5999833 9.8418764 10.9285308 8.2396358 10.5292216 4.3500233 9.7762881 10.9092638 13.2975037 9.3174554 10.1702022 9.3075399 -1.4571972 8.8210134 4.9520586 4.7521224 10.8112103 4.6719500 10.0784297 10.5402007 6.9089906 13.4523271 10.9215051 11.1101492 13.1049704 9.5341902 9.0924530 0.8645725 TCGA-BH-A1FH 47 1 1123 NA breast stage iv t2 n1b m1 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 8 white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-08 5.562279e-08 11.6199001 9.3099856 7.3584262 11.0701287 2.7009057 10.9463344 -1.6915226 10.5177262 11.7879789 7.2510923 9.9658959 8.1881605 9.2378359 9.7405974 6.8554715 8.7577260 10.5633109 10.2844255 8.5624248 4.1665548 10.1390928 10.3810451 13.2648629 10.6631024 9.7051822 10.7979238 5.0767600 10.7913855 -0.1064048 4.9667904 9.5391984 14.0325317 12.5370956 8.7327437 11.8456745 12.4297872 9.6134992 7.1127085 4.1665548 8.1143212 9.1673356 9.7639047 9.0734491 11.7754187 3.7348397 9.9342863 12.5691295 6.7222051 9.1776854 10.3382098 7.6031983 5.7597897 -1.6915226 13.5118915 8.6965948 4.9667904 8.1727635 0.8935175 4.9810032 10.2894312 10.8893071 9.8545072 10.6392143 10.1283575 10.2285581 2.4785059 11.8893072 9.9880576 5.8399596 8.0932126 10.7825368 9.9889370 15.0989642 8.7641205 11.4519607 11.4090756 7.9506294 3.2627789 5.1912191 8.7115895 9.9383895 12.6161341 -1.6915226 2.2154612 6.7761830 10.2844255 11.4430038 7.9774625 5.9667881 5.7348424 10.6206096 11.6917418 1.4785059 13.2242702 4.4984041 7.6857881 12.6637909 12.1038055 12.8194035 8.0634652 10.4561005 11.3293839 11.1446851 11.5250202 5.3746674 8.3198049 11.8203302 11.2242702 2.9524268 10.2740010 9.3652153 1.4785059 5.2642850 10.0475141 10.3440639 10.0167992 9.2214668 14.9556283 10.1688886 10.0016287 8.1587642 5.1665588 14.6925011 9.6242932 13.2570360 12.6432000 9.8940095 9.8674764 8.6361301 9.9430755 0.01656500 0.01656500 0.01656500 -0.06852900 -0.06852900 0.02918400 -0.02301800 0.02384700 0.02384700 0.88246000 0.00000000 0.00000000 0.00847430 -0.10605000 -0.06099900 -0.06099900 -0.06099900 0.01371800 0.02234700 -0.16052000 -0.09459200 0.23395000 -0.17740000 -0.16815000 1.28320000 -0.00526100 -0.00526100 -0.00526100 -0.03789100 0.01656500 0.01656500 -0.08983100 -0.06852900 0.02918400 0.02918400 -0.02301800 -0.07761100 0.02384700 0.02384700 0.02384700 0.02230400 0.01363200 -0.17525000 -0.04590600 -0.04590600 -0.04590600 -0.04590600 -0.10605000 -0.20747000 -0.16815000 0.01712400 0.01371800 0.02234700 0.00052453 -0.16052000 -0.09459200 -0.18607000 0.00763920 -0.17740000 -0.16815000 0.02370600 -0.00526100 -0.00526100 0.49718000 0.01684500 -0.00041585 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 9.3733202 14.2330885 8.1927480 11.0544619 4.4583229 11.4399522 2.4785059 1.8935564 8.2304182 9.8559540 NA 9.6014915 3.7680043 9.4946918 9.5523465 2.3960499 10.9840936 11.1305507 10.0882969 8.4595939 9.0722546 8.1927480 11.0555116 3.4785059 9.5216817 10.2285581 7.2972620 NA 10.6575822 5.8084237 12.5247171 12.0630475 9.6971330 10.3509208 8.9470136 8.8419071 6.1094776 1.6304987 0.3085939 2.4785059 8.0262540 9.0020645 9.6169165 6.5082496 8.5545463 5.2154689 9.8926005 6.4934536 9.7546270 -0.1064048 12.2556665 3.7348397 5.8084237 9.5495835 5.4648120 6.4532361 9.4138312 8.3773559 8.3447513 -0.1064048 13.4374982 NA 10.6542599 -1.6915226 8.0767616 7.2393150 8.3880621 9.0775888 12.008738 5.050045 8.708389 11.845675 10.184327 10.054672 11.775419 12.589711 9.193511 11.334928 13.287109 10.713453 9.938389 8.010750 -1.691523 8.591666 11.158374 11.837032 6.893541 9.355701 8.723263 7.342001 10.378568 6.448130 8.311392 10.663102 6.070130 6.070130 6.141468 5.522702 12.990859 10.416775 8.219970 8.389395 11.968350 6.751521 9.854507 10.159936 11.378363 10.521074 10.584702 9.670521 2.009025 9.324529 8.733710 7.865084 11.443004 9.497166 11.301916 10.620610 7.495929 13.834985 10.096480 10.577704 12.744378 10.528956 10.065968 4.784310 TCGA-BH-A1FJ 66 1 1927 NA breast stage iiia t3 n1b m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 6 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.946798e-07 11.6361892 2.9326471 6.9956665 11.2400198 -1.8746134 10.9823104 0.7102609 9.9136118 12.0708367 9.6493534 9.8680319 8.3826893 9.2996030 8.5325691 8.2206985 9.1907176 10.6194070 10.1734477 6.7799373 -1.8746134 10.1483627 9.0523385 13.8419065 10.1870100 10.5022407 11.2894226 2.2127561 10.9121836 -1.8746134 0.9326659 9.1379259 12.8339003 11.2876927 6.7289273 12.5315064 13.8573098 7.9723589 5.2442439 2.5176284 4.7977290 8.2377410 11.1861662 6.7691581 13.5367793 2.4472353 11.4857370 14.4177309 6.0794976 9.7423096 10.9840594 5.5929055 8.8135516 2.3732306 13.2698389 6.6798896 0.4472089 7.4336405 NA 3.9832855 10.2952264 11.1184167 11.0858464 12.1477559 9.7088544 9.5821691 -0.8746134 11.5716093 9.7981686 6.1421091 9.4938078 -1.8746134 11.4316479 14.5260308 9.0685488 11.5573212 11.9538346 8.5100853 0.9326659 7.0321923 9.1552787 8.1011495 11.0050761 0.4472089 6.3779670 7.0048845 9.8261746 11.5345597 10.2788534 3.6488681 4.7977290 10.4883410 12.1118545 4.1476730 13.6141144 6.5723849 7.4313630 12.6920690 11.1576915 13.2751676 8.0982811 10.1947512 11.2499074 11.0231790 11.2124327 4.9832809 8.4072312 12.8532750 12.6735814 -1.8746134 9.7709598 9.2468349 0.9326659 2.5860441 10.0045017 11.2597277 10.0449096 9.4472296 15.5572968 10.3377977 9.8984406 8.0604663 1.7102609 15.3044038 9.7723100 12.5757394 11.8179169 10.0842166 9.2127641 9.1146960 11.3434468 1.5768000 2.5645000 2.5956000 0.0072964 0.0240620 0.0384230 -0.0110720 0.0010451 -0.9494400 0.0086882 0.0086882 0.0086882 -0.0182380 -0.0020040 -0.0081339 -0.0081339 -0.0081339 0.0000000 0.0045156 -1.0071000 -0.0091926 -0.0355120 0.2077100 0.2077100 0.2077100 -0.1165100 -0.0926710 -0.0926710 -0.0423080 -0.0404080 0.0103600 -0.0505730 -0.0235510 -0.0696620 0.0384230 0.0192980 0.0192980 0.0010451 -0.9494400 0.0047935 0.0089667 -0.0100480 0.0086882 -0.0163550 -0.0163550 -0.0163550 -0.0163550 -0.0020040 -0.0020040 -0.0225940 -0.0081339 0.0000000 0.0045156 -0.0617150 -0.9386100 -0.0091926 -0.0355120 -0.0410870 -0.3560600 0.2077100 0.0152430 -0.1165100 -0.0926710 -0.0423080 0.0047935 -0.0735380 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 0.000 0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 0.000 0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.1111430 12.1450658 8.0780424 8.0589918 NA 10.3396206 NA NA 8.4210705 6.3541206 NA 7.1052695 6.8566210 10.3820998 9.5341618 5.4828547 5.0201199 10.1679867 11.5212371 9.8963781 10.0143072 8.1559688 10.4256539 1.5847220 10.1082950 9.5821691 2.5176284 NA 9.5484174 3.2545789 12.7629451 12.2764765 7.2622922 10.2272771 9.6552200 8.9526440 3.5847341 2.3732306 -0.2896509 2.0322067 8.5165451 8.7055598 11.3031880 1.8257449 8.9745893 7.0231467 10.3988056 6.3541206 10.0045017 NA 13.4685218 1.2952528 4.2750518 9.6069041 6.5714341 1.2952528 8.8976159 6.3920873 2.6488566 1.9326659 13.6809690 -1.8746134 10.5523523 -0.8746134 8.3672846 4.4472287 8.1724255 7.8222687 12.569359 6.358922 8.660577 12.531506 9.859088 11.739896 13.536779 11.417335 9.387983 10.996822 13.703409 8.897616 8.101149 10.038191 2.584722 7.344470 11.972555 10.787747 8.112565 9.336581 8.932656 10.240582 10.148127 4.740010 7.725214 10.187010 6.113986 -1.874613 9.539458 8.424257 12.125125 7.738170 7.241646 7.842978 13.805716 2.373231 11.085846 10.381510 11.305521 9.158036 10.792856 9.843406 1.825745 9.208182 7.822269 2.648857 11.534560 6.500342 10.445007 10.488341 7.664460 13.180118 10.537607 10.643217 12.535355 10.580629 9.389744 1.125320 TCGA-BH-A1FL 69 1 1673 NA breast stage iib t2 n1b m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 2.781139e-08 10.5569561 7.5439281 7.3053924 11.4590315 0.4375474 10.6481675 2.0224743 10.0838750 12.5735902 13.2142994 9.8696205 8.1897094 8.4654023 9.1295885 8.0566155 9.5780703 11.1923838 9.2760700 6.7005313 1.9229209 11.1280181 8.5667794 8.7080251 11.4611120 9.7826797 10.5892739 4.9099843 10.6773334 -1.8841677 0.9229590 7.6430452 10.4110501 12.6710560 6.4775122 13.1108053 13.9423400 8.5522798 6.4147766 4.5078834 5.7005313 8.5068118 10.6231150 6.2499952 13.5219060 1.4374941 9.9281466 14.4003742 5.5078866 9.8172254 11.5931999 6.6624633 5.6154134 -1.8841677 13.0577472 11.5297248 1.5750218 8.0164350 NA 3.9229209 10.2218039 10.1441649 10.0134135 12.1006096 10.5299891 9.1106287 -0.8844340 11.3953238 10.6094236 7.0522061 8.8746239 2.8704634 12.5181805 13.7193683 7.9058515 11.8499602 11.1630329 8.5657483 3.0697709 5.0813524 9.4911506 9.0433461 10.6873208 NA 6.0697645 6.8604017 9.7362462 10.7930676 11.3763407 4.8434865 3.7879966 10.2309369 12.2808677 -0.2993827 13.4561833 6.8125354 7.7228984 12.6661346 11.0589987 13.0867075 8.7089594 10.3335258 11.0277090 10.8133437 11.4517957 5.5750006 8.5902880 13.1851018 12.8223339 NA 10.1870305 9.2063421 0.7005285 4.8076589 9.1977172 11.3520308 10.1579115 9.1211926 14.7201214 10.3829401 9.9716045 9.2103056 1.8160262 15.3076394 9.4113370 14.3241264 12.5928837 10.7265929 10.0012645 8.6595668 11.3162568 0.47169000 1.33780000 1.35290000 -0.00954260 -0.00954260 -0.00373950 -0.00470790 -0.00055444 -0.00713140 0.00000000 0.00000000 0.00000000 0.00857400 0.00525300 0.00296570 0.00296570 0.00296570 -0.00407960 -0.00407960 -0.00138580 0.00666530 0.02810900 0.02777800 0.00366640 0.00027728 0.00610900 0.00610900 0.00610900 0.02272500 0.01279500 -0.76754000 0.00124810 -0.00954260 0.01419000 -0.00995650 -0.00470790 -0.00470790 -0.00055444 -0.00713140 -0.00713140 0.00527490 -0.00761010 0.00000000 0.01187300 0.01187300 0.01187300 0.00861350 0.00525300 0.01880300 0.00296570 0.01572700 -0.00407960 -0.00407960 -0.00407960 -0.00830050 0.00666530 0.02104300 -0.76807000 0.02777800 0.00366640 0.01502800 0.00610900 0.00610900 0.02272500 0.01335300 -0.77352000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5470657 12.1155681 8.1056723 9.8186065 3.9735470 11.4263229 3.0224566 NA 8.6576329 7.4884331 0.4375474 7.6892153 2.9735562 10.0107647 9.7549089 3.7879966 8.9936192 9.1337682 11.3773693 10.3723666 10.1033012 7.6430452 10.3241074 2.6391395 9.4374962 9.1106287 4.4906086 NA 10.2182001 3.5418369 12.6597478 11.8550324 7.5831738 10.1176800 7.2003768 9.1983824 5.4906086 1.1155660 0.1155660 1.1155660 9.3256306 8.8845796 9.6139187 5.1155702 8.7041143 4.9099843 10.8589299 6.6391294 9.6782876 NA 11.6072960 0.7005285 4.2240943 9.9721804 5.8516316 5.2240943 8.5512384 7.7394498 6.2030308 NA 13.6888011 0.1155660 9.8366674 NA 9.1407076 5.1155702 7.9293496 9.2063421 13.398782 5.046303 8.435240 13.110805 10.608678 11.080090 13.521906 12.816712 9.415200 10.888501 13.308362 11.901736 9.043346 9.736246 1.285521 7.550197 11.498057 11.4003922 9.1427831 8.5164474 9.9172764 9.0899827 11.0990392 6.3250212 7.9704367 11.4611120 4.2653169 -1.8841677 8.2227852 7.4864739 11.2335359 10.5721792 7.4554185 7.9688776 12.5593535 5.3443882 10.0134135 10.4055870 10.2079949 9.4301514 10.9199008 9.5116376 0.1155660 9.5559287 6.9222145 6.6154134 10.7930676 5.1816592 10.9721688 10.2309369 7.2345090 13.1853955 10.0459359 10.4927786 12.6546058 10.9870884 10.6830489 0.4375474 TCGA-BH-A1FM 44 1 1388 NA breast stage iiia t2 n2 m0 2-10-2014 female 1998 NA NA infiltrating ductal carcinoma yes 8 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 1.39057e-07 11.1575793 3.1798454 6.8213875 10.0775659 NA 10.7021484 NA 10.8494352 11.8331882 8.4063500 10.4784998 7.5017695 8.1744214 8.4726230 6.9368652 9.1933038 9.5953297 11.2759768 8.0828798 1.8579014 9.8448931 9.1753260 13.7754719 11.1814185 10.4919984 11.1300765 1.8579014 11.2948331 NA 0.1208827 8.4216815 11.0891346 11.8910610 9.0838439 10.8380530 13.1704560 7.2875295 6.3814755 NA 5.4063496 8.6882702 11.5298082 7.5749045 13.4203943 0.5359534 10.0948842 14.9148220 -0.4639471 9.1423905 11.0081684 5.7059116 8.1358980 -1.4639471 12.7623342 3.9622529 0.1208827 6.3688748 -0.4639471 3.3939653 10.1190681 12.0844460 8.2224858 10.7509114 10.1657973 8.2485121 -1.4639471 12.7839128 8.1433154 2.2364314 8.4017183 -0.4639471 11.5354569 13.8394807 7.1183909 10.5824272 11.6901705 8.4308029 1.5360032 -1.4639471 8.5790127 9.8618529 11.1626069 0.8579014 7.3939661 6.0278375 13.6536690 11.8966952 6.1058415 6.4001707 3.9954212 12.1640890 12.2244542 1.5360032 14.0061039 4.4901786 6.8306065 11.9901560 11.9981041 13.2953534 8.0963183 9.7998413 11.3834342 10.7590820 10.4151856 4.3173475 7.9347288 12.6735368 9.0015518 -1.4639471 9.0848071 10.3704563 NA -0.4639471 9.4496227 10.8184945 11.2933753 9.2925416 16.0320979 9.8448931 11.3688753 8.5003260 2.3433510 14.8656064 7.6704119 12.7865058 10.8193631 10.1312427 9.2536617 8.0497130 9.2158613 -0.194110 0.381900 0.816130 0.261080 0.038385 0.220080 0.283550 -0.199610 -0.290340 1.069300 0.875500 0.597300 -0.181660 -0.667340 0.072000 0.072000 0.072000 -0.354630 0.205660 0.671250 2.397900 -0.122240 -0.656390 -0.470230 2.544200 -0.036402 -0.036402 0.223010 0.926040 -0.674980 -0.194110 -0.548130 -0.671780 0.220080 0.213630 -0.200980 -0.011731 -0.199610 -0.290340 -0.693490 0.043034 0.058100 0.071266 -0.715940 -1.292900 -0.671850 -0.166360 -0.667340 -0.165980 0.078601 0.087553 -0.354630 0.205660 0.482020 0.122130 -0.679290 -1.218200 0.000000 -1.292900 -0.470230 -0.448340 -0.668910 -0.036402 -0.659280 -0.107610 -0.660020 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.656 -0.656 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.359 -0.359 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.656 -0.656 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.359 -0.359 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 7.8511350 12.8042348 7.4186285 8.9389973 1.3433510 9.9093942 -1.4639471 NA 7.5500056 8.3736134 -1.4639471 9.3790348 -0.4639471 11.2209530 8.5980313 2.2364314 7.6857321 9.3124183 6.7599867 9.5980315 9.6184736 8.2224858 10.0046093 NA 6.1358980 8.2485121 NA NA 8.8374816 2.9282945 12.3503675 11.7077876 8.8579135 11.0056271 8.9768545 9.4726232 5.0437819 -0.4639471 NA 1.1209491 6.9110252 4.9110252 10.8314673 0.5359534 6.5422271 4.6234455 9.2570844 5.5246686 9.8511348 NA 11.0710176 2.2364314 4.3688731 10.6489363 5.0697065 1.3433510 8.1834438 8.2084104 4.4186285 -1.4639471 13.8466336 -0.4639471 10.0590571 NA 10.2866922 4.2364237 9.4345867 8.0693150 13.2250551 6.9995096 9.4376064 10.8380530 10.4455034 10.9716556 13.4203943 12.3442456 9.4024915 10.4930873 12.9349293 9.4421243 9.8618529 9.1552883 0.5359534 9.0972732 12.9834560 9.5345756 7.1941964 10.1167150 9.0506992 8.5939770 9.5114105 3.2364314 9.8483010 11.1814185 4.7454363 3.9954212 4.9283040 7.6565343 11.0447705 9.7617952 10.4593128 7.2013212 9.7642027 3.2364314 8.2224858 9.9104814 11.7767766 10.2991976 9.8663419 9.8351933 -0.4639471 7.9209632 8.2202956 3.0595456 11.8966952 9.2057561 9.8380530 12.1640890 6.9954167 13.4644574 10.5260893 11.8692804 11.8427590 8.8545281 9.2975365 -1.4639471 TCGA-BH-A1FN 34 1 2192 NA breast stage iia t2 n0 m0 2-10-2014 female 1997 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.567081e-06 7.631864e-07 11.87876725 3.12964571 8.23816730 10.87820836 NA 10.51574477 -0.04022984 10.15570497 11.74578313 8.89488293 9.46453677 6.85453556 9.82545095 9.46354338 7.03653300 8.41092871 10.41863693 10.51670268 8.22650419 2.54468321 10.62238609 9.80677515 13.70848712 10.64051673 10.43545118 10.51813843 3.76707209 11.44000303 NA 0.95969598 7.22650468 10.87708984 14.02862404 8.83930112 11.02715212 10.95230211 10.33421383 7.54468011 4.38598316 7.29510769 9.23234753 9.06169332 7.31726969 12.28502320 NA 10.27316769 13.65766266 8.44755771 9.18125663 11.23932834 6.73450505 3.66015281 -1.04037820 14.24618417 6.81769872 2.86661130 7.81769872 NA 3.20764301 10.04186678 10.85982982 9.68508392 11.43113892 11.15293505 9.54561919 0.54468321 10.91790788 9.90076539 5.20764692 7.11453569 1.95973307 11.15754873 14.56128543 7.80937328 10.68721277 11.65146125 10.34934902 2.86661130 4.68763743 8.80677515 10.26235669 9.79339847 -1.04037820 5.33475775 6.63214314 11.21769482 11.26149967 6.26349832 5.04718064 5.14954391 9.31836904 12.31864361 2.28163891 13.16360098 4.16917140 6.90223280 12.28319476 12.71356123 13.24872795 8.56519730 10.18070061 12.17631205 10.91210230 10.96218120 5.00411033 7.91391382 12.52553385 11.88712536 -0.04022984 10.37757029 9.13962681 0.95969598 2.96691030 9.55030487 11.06660777 11.17949127 9.72043769 14.33933301 10.19991277 9.71543988 9.10692275 2.12964571 14.18258809 5.93699827 13.21260487 10.92044375 10.40317930 9.32931514 8.12964262 10.42551879 0.3534900 1.3459000 2.3355000 0.1017600 0.6871300 0.0153080 -0.3671400 0.5886500 1.9261000 -0.7127400 0.1550200 1.5518000 -0.0364010 3.4309000 0.0077686 0.1288900 0.1288900 0.5608100 -0.7498600 1.0113000 -0.0225500 -0.7041500 0.1187300 0.1730000 0.1730000 -0.2178700 0.0752710 1.8887000 0.2978700 0.0884030 -0.4575800 -0.4003000 -0.7302900 0.1124200 -0.8089000 -0.0275350 -0.1483000 -0.7787800 0.7881300 0.8225500 1.1044000 -0.5505600 -0.7718900 0.4723800 0.3339700 -0.3391800 -0.6795800 1.5699000 -0.2673300 0.0077686 -0.3073300 -0.2597000 -0.6553800 -0.6553800 -0.7462100 -0.0225500 0.1481600 -0.2003700 -0.2488500 0.1730000 0.0512450 -0.2178700 0.0752710 -0.6783900 -0.0931390 -0.1877300 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.195 -0.195 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.195 -0.195 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 7.45956359 13.07809108 5.18853544 9.44655276 2.28163891 10.55870071 NA 0.54468321 8.25663377 8.50081440 5.24511912 9.14195078 4.20764301 11.32740550 9.20764521 4.89045642 6.36910873 10.22416029 7.78308467 9.51334704 9.62606600 8.85756305 11.11009971 1.19849415 7.47541730 9.54561919 0.54468321 -1.04037820 9.87932593 1.95973307 13.03385920 12.46105735 7.50274987 10.98658692 10.96604380 9.73861620 5.71460546 1.54468321 -1.04037820 5.10946504 7.74762036 7.18853643 9.08513116 2.86661130 9.50593697 7.95407123 8.97094509 8.11706487 9.84998206 -1.04037820 11.75575732 4.57442853 4.16917140 9.57326772 5.93229508 1.95973307 9.60987203 6.46751263 3.35203813 0.54468321 12.52969198 -0.04022984 10.26634910 -0.04022984 8.03920256 4.98208547 8.27260086 8.74925133 10.449666 7.483280 8.181305 11.027152 10.791421 11.256060 12.285023 10.210608 9.557677 11.450318 13.263712 11.973564 10.262357 11.552408 2.129646 7.506612 11.095427 10.7007633 6.6179288 9.1195891 7.7245896 9.3029035 9.4101043 4.4191478 3.3520381 10.6405167 9.0577497 NA 7.5927127 8.8795940 11.5202894 9.7328570 8.0630056 8.3062312 11.1933374 3.9597145 9.6850839 9.9051616 12.4004572 9.4764028 10.0675887 9.4891483 9.9576028 8.5175643 8.3450410 3.7146082 11.2614997 8.0338590 10.4818088 9.3183690 8.3065197 13.0998285 10.5465576 10.3396376 13.2665627 10.9197197 9.1618416 0.5446832 TCGA-BH-A1FR 73 1 4398 NA breast stage iiib t4b n1a m0 2-10-2014 female 1997 NA NA other specify yes 4 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 4 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 2.781139e-08 11.95675246 5.55427265 8.28219374 11.50215370 -0.03061924 10.60230599 NA 9.85881481 11.87544980 7.55802574 10.15789965 8.11141792 9.36162823 9.16775582 8.80378176 8.61136237 11.49262769 9.54201094 7.38716347 1.77665148 10.91219177 9.27423254 13.92559619 8.13421786 9.90300150 10.95087808 6.00273402 10.07652783 -1.03061924 2.77667253 7.50458623 11.23521882 13.70227313 9.45010105 12.13719930 12.97247730 9.33672546 7.17876443 3.72420277 4.96931169 8.43691638 6.25471308 6.37019044 14.31568601 2.13924027 9.62752221 14.59804111 4.46116181 9.65561873 11.19331245 4.13923208 7.68011756 -0.03061924 13.97559830 8.70909140 1.55429414 7.24543481 1.96930708 4.55427572 9.81166112 10.53964089 10.41949107 10.74080026 10.34543619 10.26450570 0.55424502 11.31859201 10.25760011 7.43283500 6.03539957 1.96930708 11.78869158 14.37441901 8.35821074 11.52677450 11.13170214 6.83349734 1.77665148 -1.03061924 8.02187888 8.71918036 9.76128760 -0.03061924 5.15913669 7.34868921 9.92568691 11.12570992 6.33563331 6.42874205 3.49287865 10.83851905 11.86753428 -1.03061924 13.49910735 6.64173676 7.35732767 10.89523604 9.91986666 12.67807140 7.73749479 10.87920392 10.50604372 10.81807067 10.83774752 4.58401843 8.19331245 11.73976821 10.85615050 -0.03061924 10.22787678 8.64526790 -0.03061924 4.08159528 10.05876132 10.40028602 9.95586390 8.69552898 14.59213479 10.06338847 9.71498505 8.28446046 1.55429414 16.32732663 5.15913669 11.84410008 11.19782891 10.60366807 9.16406771 7.89115182 10.31804450 0.00027728 -0.00280030 -0.00754590 0.00013863 -0.00032891 -0.00116530 0.00000000 0.00124810 -0.00268480 -0.00142050 0.00555290 -0.00332430 0.00208050 0.00113070 -0.00083160 -0.00083160 -0.00083160 0.00013863 0.00013863 -0.00687510 -0.00128730 0.00138680 -0.00047252 -0.00047252 -0.00047252 -0.00235530 -0.00235530 -0.00235530 0.00513590 0.00027728 0.00027728 0.00444110 -0.00032891 -0.00055675 -0.00439970 0.00000000 0.00000000 -0.00871030 -0.00268480 -0.00268480 -0.00124730 -0.00124730 -0.00142050 0.00430210 0.00430210 0.00430210 0.00430210 0.00113070 -0.02849100 -0.00083160 -0.00083160 0.00013863 -0.00191960 -0.00191960 -0.00166290 -0.00128730 -0.00097017 0.00847300 0.00221930 -0.00047252 0.00138680 -0.00235530 -0.00235530 0.00138680 0.00346870 0.00374650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.71077785 11.17082215 6.73749479 9.15542493 4.25471497 10.97001505 2.77667253 -0.03061924 8.51427536 6.83349734 NA 6.44504465 -0.03061924 10.21842423 9.21605150 -0.03061924 7.52005760 9.65668656 12.02238817 9.83813334 9.88152652 7.93797755 11.42438110 4.58401843 10.07914140 10.26450570 5.27309063 NA 10.40654273 3.21723072 12.62819170 12.14314405 8.13421786 11.09181525 8.14173829 9.47710536 5.73749479 1.77665148 NA 6.44504465 8.75230905 9.60321425 9.76210111 3.61316622 9.81478512 7.22669829 10.74327419 5.93509431 9.62036244 NA 13.75925192 3.72420277 9.02323678 9.39767100 6.23243820 3.96930708 9.15913543 7.33999783 6.71077751 NA 13.41968438 2.42873200 11.05345479 NA 8.97071909 5.98053719 7.94659051 9.47214269 13.245726 5.273091 9.030007 12.137199 10.324513 10.434367 14.315686 13.251168 8.808515 10.605935 12.429255 10.576179 8.719180 7.546739 2.776673 7.766972 11.011654 11.07390958 8.58585977 8.86715640 9.21010219 8.58029852 10.44153961 7.28219421 10.50895428 8.13421786 7.03000715 -0.03061924 5.23609841 7.45939965 9.52773151 10.48155748 9.03802183 9.08695383 10.91804307 6.08825186 10.41949107 10.65581136 12.17647768 9.50458623 10.14173829 9.22197614 NA 9.38424974 6.69054700 6.43691638 11.12570992 4.96931169 12.01012619 10.83851905 7.05146020 14.04987853 10.69935634 10.41484303 12.96498963 9.89040793 9.57386395 2.13924027 TCGA-BH-A1FU 44 1 2192 NA breast stage ia t1c n0 m0 2-10-2014 female 1997 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 120.48.0 NA NA 2 5 NA NA 2 6 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 11.9423202 8.6996224 7.7785739 10.9985251 2.3777068 11.0009662 NA 10.2950664 12.1122628 7.6000868 9.2795669 7.8343908 8.1893368 10.9720190 6.2845845 8.8398557 10.3172735 10.4513896 8.1169126 3.6507071 9.9456504 11.3219183 13.7616236 9.9807024 9.8137118 10.9911769 6.7234698 10.3991324 1.1146335 3.4931734 9.6145058 12.9769873 12.0869218 7.7026250 16.8292382 11.7568921 9.8894469 4.8371258 -0.2072279 6.7293692 8.9513415 7.9064740 8.2252740 11.9966915 1.6000794 11.3604503 10.6168950 6.9726410 8.6538189 11.0907944 7.4184404 5.8907628 NA 13.2884807 10.9779170 5.2021238 9.1135323 0.7927721 5.6630969 9.8032600 10.3182527 9.5198013 10.0885007 10.2074170 10.4352349 1.6000794 11.7951952 10.2830813 5.0781359 6.7234698 5.1502835 8.6814749 15.8186176 7.6721927 11.1866585 11.2084736 8.3963582 3.4931734 1.3776791 8.2885870 9.6646371 11.7863779 0.3777346 5.9924036 6.6000868 9.9194363 11.4994437 7.6033036 6.8316505 5.2684643 10.4239089 11.4957702 -1.2072279 13.3346149 3.7469254 7.3814460 12.5665922 13.9091976 12.7863779 6.9116724 11.0836147 11.1661408 10.6746067 11.8041338 5.4509440 7.9576390 11.9882578 9.9570103 -1.2072279 10.5891771 10.1731929 -0.2072279 3.1103298 10.5287109 11.3480399 9.9689049 9.3338285 14.6036298 9.9245888 10.3497168 6.4862188 4.4651582 14.5186040 10.4383903 13.7446084 12.2981713 10.4383903 10.0275493 9.0131102 10.1157753 0.12579000 0.12579000 0.12579000 -0.15848000 -0.12121000 0.10599000 -0.20921000 0.04939800 0.04939800 -0.32217000 -0.32217000 1.58180000 0.03397200 0.03397200 0.02735700 0.02735700 0.02735700 -0.13225000 -0.12135000 -0.17664000 0.10060000 0.07915900 -0.05307100 3.65690000 -0.03067700 -0.11535000 -0.11535000 -0.11535000 -0.00097017 0.12579000 0.12579000 -0.01904000 -0.12121000 -0.15208000 0.07187300 -0.14477000 -0.14477000 0.04939800 0.04939800 0.04939800 0.00000000 -0.03681000 -0.32217000 -0.23341000 -0.17172000 -0.17172000 -0.08479300 0.03397200 0.03397200 -0.06321900 0.02735700 -0.13225000 -0.12135000 -0.12135000 -0.15911000 0.10060000 0.07915900 0.03990200 -0.05307100 -0.31342000 -0.05838300 -0.11535000 -0.11535000 -0.00097017 0.22854000 0.12417000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.270 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.270 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 9.865534 14.308124 8.652267 9.823399 4.244271 11.359737 4.901258 7.011900 8.580634 9.137028 -1.207228 9.145515 8.221092 10.516819 8.918145 1.114634 9.843941 10.062443 9.647600 9.554283 8.885925 7.619280 11.748200 2.880196 8.901256 10.435235 5.150283 -1.207228 10.585929 2.699618 13.314516 12.629966 8.849369 9.789911 7.864194 8.765712 4.436588 2.600079 -1.207228 -1.207228 8.075820 9.519801 8.345401 5.362589 8.529861 7.653819 10.186659 7.580635 9.107881 -1.207228 11.243685 3.792730 4.837126 9.416421 5.597767 6.185050 9.899949 8.182901 7.924589 5.407441 13.479013 1.114634 10.593227 NA 9.946917 5.880196 8.154675 7.801161 12.160867 6.362587 8.849369 16.829238 10.022152 10.892408 11.996692 10.740369 9.357834 10.931004 13.162125 10.859830 9.664637 7.696614 1.114634 7.500091 12.764275 11.683376 6.392645 9.132582 8.896020 7.866873 10.580585 7.669249 7.962657 9.980702 6.922015 4.574089 7.557603 7.877354 14.254531 10.938027 8.575730 8.385189 10.863859 7.440191 9.519801 10.302507 11.445129 11.355213 10.710104 9.695861 3.493173 9.607971 8.697427 8.364484 11.499444 8.394503 10.802560 10.423909 7.967657 14.396822 10.303002 10.430262 12.249343 10.738907 9.889447 2.493161 TCGA-BH-A201 64 0 NA 210 breast stage ia t1 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 1 4 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 5.562279e-08 11.9061295 6.1844251 6.0835836 10.6650060 -0.1193537 10.5610034 -1.7041594 10.5770318 11.6854471 9.2212357 9.7261338 7.3563771 8.8483503 9.6750597 8.1675867 9.2418566 9.9159012 10.5951756 8.2900350 2.8192390 10.4454284 10.5802163 13.5536584 11.1309423 9.4015897 10.9685486 4.8806415 10.4796268 -0.7043945 0.8806463 8.3027084 13.8227612 12.9183052 6.8955947 12.6694981 12.3981492 10.6226725 6.7344725 3.8806463 8.0835841 8.8806439 8.6153534 8.7683723 12.3461252 -0.7043945 9.6788455 13.2405306 5.9751624 9.0354196 10.6341392 7.2928609 7.0064877 1.2956643 13.0237623 7.3989694 2.5436196 7.5124268 0.6175806 4.1285739 10.0848073 10.6598159 10.2326873 12.2824122 9.6581731 10.3407584 1.6176276 11.8809960 10.1062529 6.0770400 8.2829452 11.3804897 10.5352798 15.3393602 8.3541467 11.5340861 11.3676464 8.2219771 2.8192390 2.8806463 8.7448298 10.2668656 12.4548431 0.2957230 4.5994606 7.2469657 9.9057834 11.8054563 8.3550260 5.9821813 4.8955935 10.8246237 12.0157118 3.3400780 13.6694301 5.6176100 7.5293009 13.4934739 12.8594734 13.2455080 7.9627931 10.4558679 11.1407793 10.7813496 11.5328913 5.2264199 7.5436088 12.0989043 12.9963920 0.2957230 10.1984333 9.5822391 3.5436072 3.2784457 9.8172817 10.3768318 9.8084217 9.8792343 14.6867067 10.3973287 9.7865322 7.8881387 6.1721975 15.7640906 9.8328997 13.6671857 12.9591282 9.6847749 9.3644595 8.4805568 10.0195086 -0.00691950 0.43682000 0.43682000 0.01864100 0.46388000 0.00736090 0.00917050 -0.00124730 -0.47088000 2.47010000 2.29390000 0.04060900 0.00152550 0.00152550 0.01377200 2.95640000 3.65690000 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00744820 -0.01697900 -0.01697900 -0.01697900 -0.02342900 -0.02342900 -0.02342900 -0.01188700 -0.00691950 -0.00691950 0.03284500 0.01864100 0.00736090 0.00736090 0.00917050 0.00917050 -0.00124730 -0.47088000 -0.47088000 -0.00013862 -0.00013862 -0.52041000 -0.00664320 -0.00664320 -0.00664320 -0.00664320 0.00152550 0.00152550 0.01377200 -0.51022000 -0.01257600 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00581400 0.00592520 -0.45565000 -0.01697900 -0.12382000 -0.03484200 -0.02342900 -0.01188700 0.00305220 -0.00912860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 7.6986936 13.9437018 9.6669135 10.1687409 2.3924548 11.0837878 1.1030612 1.1030612 8.4643534 7.8636374 0.6175806 8.4998367 1.6176276 10.5697682 9.4191560 1.8806463 8.9232152 9.9218466 10.5042205 9.4737236 9.6840485 7.8113811 11.2464194 2.8806463 9.2264187 10.3407584 5.7551119 NA 10.5229964 3.9395369 12.3321984 12.2470571 7.9874249 10.0655191 9.1293621 9.3055100 6.0638653 0.8806463 NA 1.8806463 7.8521874 8.7240414 9.6992259 6.1158593 7.4275383 6.1474309 9.7719212 6.3346005 9.6349745 NA 10.6839677 4.7219468 4.7050711 9.8902112 6.1385339 3.4656088 9.1521068 8.0421956 5.2145445 1.7551012 13.6660963 -0.1193537 10.6449626 -0.7043945 7.3724968 4.8955935 8.3455299 8.2234592 14.7337064 6.0030400 8.9935176 12.6694981 10.4864720 10.8493106 12.3461252 11.7325230 12.0615123 10.9395375 13.5722056 11.0829718 10.2668656 8.4081208 -0.7043945 7.6062942 10.9614613 11.5735499 7.7135336 9.1973025 8.8759398 8.8241355 10.2906216 4.9103921 5.7551119 11.1309423 7.6685461 4.6532320 5.9961221 8.0072106 12.2256794 9.2227186 7.6728920 8.7145879 12.2066987 4.8192441 10.2326873 10.4048591 10.7476651 10.0790889 10.6201432 8.7612477 3.2956789 9.0984964 7.8437710 5.4146227 11.8054563 8.2729614 10.7048071 10.8246237 7.7571606 14.1081094 9.9909096 9.9891682 13.4656846 10.6925536 9.5880030 -0.7043945 TCGA-BH-A202 60 0 NA 22 breast stage ii t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 3 4 NA NA 2 2 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 7 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 5.562279e-07 1.112456e-07 11.7243798 3.0611541 6.9253420 10.7115340 -1.9389842 10.6366946 0.3830545 10.2602141 11.5761159 6.8293397 9.5363821 7.2851571 8.0138966 9.3078959 5.8160416 8.5236576 9.0730814 10.0699341 8.5175096 5.2410660 9.7916254 10.3141163 12.1059763 10.1572115 10.4288430 10.4963047 5.8813342 11.1659146 0.6461627 3.7615938 8.5479903 10.8270630 12.3692810 9.4405337 15.5205709 11.9879146 8.5817742 5.2007084 0.3830545 5.8685115 8.6740238 7.9113422 6.3785671 12.7086137 NA 9.1949398 12.2273184 2.7050047 9.0036112 11.8391297 8.1942974 4.0153548 -0.3538373 14.3068994 10.0952665 2.0611541 8.1352968 NA 3.8685090 10.1598454 10.9644723 9.5565107 10.5007265 9.9426517 9.1942976 0.8685287 11.1899552 9.3569242 5.8093476 7.5925370 0.3830545 9.0498401 14.7085435 7.8021506 10.7895010 11.6747146 8.5964306 0.8685287 NA 8.4534727 9.2391975 14.1130440 -0.9387077 5.5847160 6.7157918 11.2588328 10.4540094 6.4534731 7.3694944 5.7890745 9.2348325 11.9350800 0.6461627 14.0478640 5.5530072 7.0807461 12.4049656 12.7207053 12.3681426 6.7300407 10.7426134 11.2045385 10.4625202 10.8068296 4.8940465 7.8457898 12.7928986 10.3214869 NA 10.0018360 10.6816042 0.8685287 2.6467157 10.0298221 8.2373285 9.9369047 9.3615078 14.7414049 10.1830125 11.4625682 8.0269395 6.3557757 15.5748906 8.8168774 12.8027276 12.0216098 10.2137570 8.4491726 8.3819560 10.6126618 -0.0227440 1.2277000 1.2277000 0.3093700 0.2826300 -0.0366740 0.2356600 -0.0395290 -0.0395290 -0.3970800 1.6389000 2.1053000 -0.3421700 -0.3421700 0.2530800 0.2530800 0.2530800 0.1545700 0.0000000 -0.3778600 -0.3738800 -0.0193140 -0.3602200 3.6569000 0.3015400 -0.0073339 -0.0183550 -0.0183550 0.2962800 -0.0227440 -0.0227440 -0.3627200 0.3093700 0.3739700 -0.0212350 0.2356600 0.2356600 -0.0395290 -0.0395290 -0.0395290 0.2687500 -0.0754780 1.8480000 0.2606600 0.2606600 0.2606600 0.2783700 -0.3435700 -0.3435700 0.2530800 0.2530800 -0.2667300 0.0000000 -0.3731300 -0.3778600 -0.3738800 -0.0193140 -0.3692900 -0.3602200 0.3015400 -0.0732100 -0.0073339 -0.0183550 0.2926200 0.3127400 0.2065600 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 8.3751720 12.3549143 6.1904391 8.8789383 2.9036361 10.0430792 2.3830822 NA 8.3626514 8.9322904 -1.9389842 7.8838853 3.0611541 10.6174218 8.7059130 2.3830822 6.4098831 10.5084969 9.7754009 9.7454656 10.2756900 7.2803235 10.7801162 1.7615831 10.1336229 9.1942976 1.7615831 NA 10.6293490 3.8160467 12.9317127 12.7359545 8.0484193 10.3226627 9.0723827 9.0298222 7.1000746 1.5205983 -1.9389842 6.8845222 8.4523990 9.7581228 10.1529212 3.1055440 8.2631321 6.0835240 9.8845225 7.5449714 9.3401855 -0.9387077 10.6740238 3.0611541 4.3830822 9.8027908 6.5355507 4.2509767 8.8979946 8.8334698 6.1748977 0.6461627 13.5928109 0.8685287 9.9062533 -1.9389842 8.9105603 4.0835197 8.5205869 7.6795406 8.9930524 7.1618172 8.8701196 15.5205709 9.6702786 11.8283052 12.7086137 12.1596809 9.5144259 11.0251351 13.0454847 11.6963066 9.2391975 9.4165064 -0.3538373 7.9918925 11.2958230 11.232332 5.726491 9.159187 8.313821 10.485322 10.348166 6.544971 3.705016 10.157212 8.670334 4.327939 7.866899 8.376429 11.829650 9.591074 8.354627 9.067481 12.830322 5.733579 9.556511 9.693242 11.046464 9.326770 10.943034 9.770670 5.190437 9.342958 9.722239 5.026942 10.454009 7.341926 10.331232 9.234833 7.850689 13.754533 10.361794 10.865085 14.102772 10.071334 9.718920 1.761583 TCGA-BH-A203 78 1 1174 NA breast stage iib t2 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 35 white not hispanic or latino 142.49.0 NA NA 4 3 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.318231e-06 5.550446e-07 12.1991436 5.9462583 9.3857268 10.9758344 -0.4799550 9.5773083 0.5199444 9.7566057 11.7573528 7.1011941 9.4208603 7.6101058 8.3934377 9.2597741 8.9080107 10.2715375 10.1087080 11.0472260 8.4698201 4.4026335 10.0888996 10.9845392 13.5950547 10.2428010 10.0610901 10.8226324 6.3208926 12.5013743 -0.4799550 0.8418926 8.4298867 11.2906573 13.4631951 7.3591970 11.8447366 11.9163306 10.2130448 5.7488127 2.5199947 5.3654826 9.3345759 13.5898627 6.5860832 12.9045074 -1.4799550 9.6094440 12.7651004 1.6899253 9.1593343 13.0207731 9.4727347 8.8419216 3.2204383 13.8960384 11.6340611 0.1050075 8.2782167 -1.4799550 5.1199081 10.1105805 10.9028877 9.6041375 10.8556630 10.6170380 10.1624964 0.5199444 11.1570711 9.5164669 5.6180242 7.5506606 13.3170976 10.6232812 15.2232347 8.6871730 11.0324870 11.0654406 9.7791482 1.6899253 4.3013535 8.6466980 10.3564383 12.9899532 -0.4799550 6.0356943 7.7098179 9.4850562 11.3845665 6.0435545 7.0396297 4.7488101 10.8186288 12.1388378 1.9794401 14.0206486 5.4857778 6.8950323 12.1325164 12.5781543 12.9860699 7.4448062 9.8714848 11.1477553 10.2751690 11.1793204 4.9794263 8.4770956 13.8004743 10.1231561 -0.4799550 10.7756122 8.5242138 1.1049405 3.5204474 10.6262292 11.3961266 10.7048688 8.7667340 15.0978943 10.0469817 9.5657531 8.9357352 2.2204228 16.0749944 10.0093398 13.8158700 11.5907852 10.1529887 8.7548110 8.7643574 11.3197365 -0.314590 2.110700 0.672520 0.188890 1.507400 0.499600 0.643780 0.194820 2.534700 3.656900 -0.296500 0.705320 -0.041431 0.009207 -0.325070 0.444600 0.444600 0.277100 -0.022360 0.087245 -0.060345 -0.050776 -0.318090 -0.310260 0.226840 -0.304510 0.114920 0.114920 0.000000 -0.030950 -0.314590 0.154410 0.188890 -0.624550 -0.165740 -0.228960 0.015587 0.194820 -0.332460 -0.070402 -0.062629 -0.122780 -0.327390 -0.602060 -0.073329 -0.061689 0.192690 0.009207 -0.325070 -0.325070 0.444600 0.277100 -0.057924 -0.060748 0.087245 -0.066843 -0.216020 -0.307330 -0.318090 -0.310260 -0.607860 0.015587 0.114920 -0.116650 0.236430 0.483370 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.305 -0.305 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.305 -0.305 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.253 0.000 0.000 0.000 0.000 8.7110526 12.4035914 3.8053956 8.9187371 2.0794976 10.3756406 1.6899253 -1.4799550 8.3046283 7.7750222 1.1049405 8.9293845 2.9794218 11.2750897 8.5806893 2.9123050 8.5643877 12.7918212 10.1826619 11.3453498 8.1518979 8.1420453 10.9556637 2.3273425 6.6021421 10.1624964 2.2204228 NA 10.4403463 0.8418926 13.7557833 12.6344678 7.4298862 9.3544645 8.0917458 10.0855716 4.2479123 1.3273425 -0.4799550 0.1050075 8.2865222 8.7548110 10.5850730 4.6074546 9.6209908 6.9165985 10.0218306 5.9875983 9.9063949 NA 11.0040611 1.8419329 3.0435545 9.4602189 6.7725640 7.0707403 8.5478994 7.6389347 8.4727347 2.2204228 13.9213730 1.6899253 10.6457298 NA 9.8703801 4.1638529 8.9494001 9.0088378 12.773709 6.569842 9.892858 11.844737 10.121764 11.401681 12.904507 10.667834 9.582040 11.243441 14.059819 10.393438 10.356438 9.362344 -1.479955 8.294781 11.692577 11.3721328 9.2547032 8.5860828 8.7937889 8.6193411 10.9011795 6.3965106 8.4178390 10.2428010 6.1638489 1.5199947 5.0745825 7.9077956 11.2262736 11.1047211 8.5044118 8.6376367 8.8631793 7.5994785 9.6041375 10.2342389 10.8059736 9.1374610 10.5742586 9.4705493 0.8418926 10.2476162 6.9165985 7.8053956 11.3845665 6.8053956 11.1591080 10.8186288 6.9080107 14.0168472 10.5813646 11.3295606 12.2814408 11.2228155 10.0012884 1.9794401 TCGA-BH-A204 80 1 2534 NA breast stage iib t2 n1b m0 2-10-2014 female 1996 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 136.49.0 NA NA 5 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 1.39057e-07 11.3949971 3.9481616 8.9474940 10.4592120 -0.5542733 10.5678377 1.6680283 10.6272232 11.0514449 5.8436874 10.3557997 7.7780666 8.2911468 8.6189173 7.2572992 8.7988036 9.1690333 9.6051076 6.4456572 -1.1392358 8.5954037 7.9873988 13.0902641 9.7128336 10.0597530 10.9227404 -0.1392358 10.8813270 NA 0.1825652 8.0725823 12.3546122 12.7151244 9.4219821 11.8218726 12.0123451 7.0652653 3.1826287 -1.1392358 8.0142465 8.6412339 8.3744218 6.7494377 13.1147263 4.9267822 8.8754121 14.3274877 NA 9.6383604 11.5249193 7.3525476 5.8493788 1.0306186 11.5698330 9.5063526 2.3201380 7.9587261 NA 4.6288786 10.4458915 11.2606397 11.1554586 10.6006858 10.7368274 8.4864031 NA 12.6965473 8.6824683 3.6680510 8.3605403 -2.1392358 11.4160023 13.6834393 9.6782295 12.6364074 12.1941291 7.4248440 -2.1392358 5.1916100 7.7555119 9.7739576 10.7982519 -1.1392358 7.5471945 6.3364280 12.3253038 10.8259374 6.3525467 4.4754027 3.3201236 10.7895827 12.4501113 6.3525467 14.1083993 4.6420546 8.2248289 10.4587467 10.1935700 13.5084056 7.6272231 10.5749397 10.8809797 10.6506496 10.4822883 4.9899791 7.5045505 11.7265241 10.2945405 0.6680283 9.4219821 10.4241289 -1.1392358 1.4480552 9.0337467 12.2298826 10.8369003 9.5050013 14.7173751 10.4966390 10.8804587 6.6288786 3.1086248 16.3078743 8.6494125 11.3836435 10.0716699 10.2008225 8.1379814 8.3545496 8.8941378 -0.00788630 0.02412700 0.02820000 0.00000000 -0.03857800 -0.04251700 -0.01106000 0.00471900 -0.04085300 3.65690000 2.89900000 1.53230000 0.01237600 0.03693900 0.01419000 0.01008100 0.01008100 0.00480250 0.00480250 0.05167200 -0.88820000 0.04287400 0.13495000 1.05150000 0.10731000 -0.43626000 -0.43626000 -0.43626000 0.10322000 -0.75986000 0.02258500 0.02186100 0.00000000 -0.04251700 -0.04251700 -0.03054700 -0.03054700 0.00471900 -0.04085300 -0.00069303 -0.00788630 0.81843000 -0.87408000 0.01391100 0.01391100 0.01391100 0.08681100 0.03693900 0.07237700 0.01419000 -0.84018000 0.00480250 0.00480250 0.09202500 -0.03428000 -0.82448000 0.05380600 -0.81153000 0.13495000 0.13169000 -0.83833000 -0.42503000 -0.43626000 0.07802000 -0.07894300 -0.76510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 7.1758439 10.8214202 7.4900510 8.3655132 1.8606848 10.0704523 -2.1392358 NA 7.8996131 6.3724472 NA 7.3053158 -2.1392358 10.3763940 8.4964124 1.1826287 7.7570266 9.6611897 6.1038690 9.3323694 8.8654345 7.6696582 10.3080358 2.5045441 9.3349072 8.4864031 -0.1392358 0.8606848 9.7163414 4.9481569 11.7314442 11.1266023 8.1724425 11.6374357 6.7555125 9.0085351 7.3565497 2.9481523 -1.1392358 4.9587267 7.7279729 7.0846957 10.5133152 3.4456605 7.1502063 5.7061852 11.3520463 5.9899769 9.7776932 -2.1392358 7.5117455 2.8148990 3.2530060 10.3365517 4.3587830 NA 9.5018428 9.4512812 2.8606848 NA 13.4383591 2.1086248 9.6325963 NA 8.0256014 4.9587267 8.5348865 8.8761093 13.793679 5.146097 9.128651 11.821873 10.073583 10.953451 13.114726 13.375100 10.106247 11.225376 12.328809 10.977038 9.773958 8.002802 1.320138 7.807600 11.450228 10.7389368 7.6615943 9.0262293 9.8621025 10.6241141 10.4338514 4.7675859 9.8978979 9.7128336 6.5189065 -1.1392358 3.7433426 8.0197708 11.4103586 9.7717116 9.5697780 7.4790794 11.5428110 1.3201380 11.1554586 10.1080284 12.6435901 7.7402773 10.9207146 9.2769639 2.9050813 7.6677431 7.0671956 1.4456737 10.8259374 6.5852074 10.7028482 10.7895827 7.2594382 13.9384696 9.7302881 10.1871238 12.3695413 8.4955053 9.8243128 -0.1392358 TCGA-BH-A208 48 1 1759 NA breast stage iib t2 n1b m0 2-10-2014 female 1995 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 136.49.0 NA NA 4 1 NA NA 2 6 3 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1.112456e-06 2.781139e-07 11.2388949 8.4015759 7.4382879 11.0801125 1.6089984 10.5871154 -1.1982619 10.0001081 11.1227455 6.4455198 9.6751070 7.6964808 8.7249906 10.1008710 6.2610945 8.6565314 9.1190757 10.3557722 9.1907566 2.1236000 9.7703297 10.9837469 12.7097741 10.1336995 10.0184088 10.4455192 5.4163736 10.5176250 1.1236000 6.1592154 9.6049870 12.4288549 12.4292676 8.9154053 12.1715330 10.8240308 10.3393668 5.8784777 -1.1982619 8.4182119 8.6218420 8.9852983 9.6957228 10.5304338 -1.1982619 10.7238758 8.2425320 5.2610945 9.7810882 9.9778361 8.8731254 4.7323995 0.3865902 13.1075067 9.2216231 4.0495872 8.2131742 0.3865902 6.7616656 9.5607190 10.3724674 9.5780960 9.5029694 9.7434443 10.6804803 -1.1982619 10.8794801 9.6266218 3.3866316 7.5797398 9.9212526 9.1100019 15.9467692 8.4973613 11.1780598 11.0859088 8.2300233 2.3866178 -1.1982619 8.2300233 9.8288780 12.6347508 -1.1982619 6.9765882 6.7025301 9.9914875 11.6292042 7.5928263 6.2195151 5.5960794 10.5850705 11.3903777 -1.1982619 13.9653127 3.5021014 7.2404546 13.1620986 14.2613188 12.6736645 8.4934064 11.0766235 11.4328401 10.6224762 11.0376772 4.3252281 7.9939557 11.9189814 9.6510682 4.0870639 10.5739776 8.9803278 NA 3.3896219 9.9482317 10.0713741 10.5669491 8.8838120 15.4321292 9.7860814 9.2824532 6.4951499 5.8016631 13.8153346 11.3480752 14.1395985 11.9846780 9.5739775 9.8990368 8.3619960 8.9558356 0.0065262 0.0065262 0.0065262 -0.2161400 0.7526100 0.5974600 0.2571500 0.7806100 0.2240700 0.5257300 0.0061090 0.0061090 -0.2356900 -0.2356900 0.1748300 0.6664100 0.6664100 -0.0697340 1.0996000 0.2659200 0.0207630 -0.2397300 -0.2341100 -0.2341100 -0.2341100 0.3460000 0.3460000 0.3460000 0.2390700 0.0168450 0.0065262 0.0000000 -0.2161400 0.4698100 -0.2764300 -0.2089600 -0.1964600 -0.2901100 0.2240700 0.2240700 -0.2382300 -0.0324500 -0.5087700 -0.1528500 -0.1528500 -0.1528500 -0.1528500 -0.2356900 -0.2356900 0.1748300 0.6664100 -0.0697340 -0.2377700 -0.2377700 0.2582700 0.0207630 -0.3233300 -0.2336100 -0.2341100 -0.2341100 0.2300900 -0.2670900 0.3460000 0.0130740 -0.0628980 -0.2615500 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 9.3639054 14.7413570 7.7264757 10.2174047 0.8195864 11.1082944 NA 5.1939806 7.9890152 9.8079890 NA 9.7913342 6.1415125 10.5797401 8.7832304 1.3866454 10.1258435 9.7558593 7.4705483 9.6881218 9.3568657 7.5632146 12.5095613 1.9715895 7.5764503 10.6804803 3.2610945 NA 10.7272175 1.6089984 13.6158449 13.0482552 9.9914875 10.4108417 8.5895654 9.8884627 3.5565520 1.8016553 NA NA 8.7703299 9.8858071 9.1020156 5.8350853 8.4533427 5.1767017 9.8302598 7.4562994 9.3193323 0.3865902 12.1322998 3.9715895 4.8891279 9.8217470 5.2848324 6.9665701 9.9958043 8.5346783 8.0590508 -1.1982619 13.6666713 2.6090221 10.5171961 -1.1982619 9.1668919 7.2975179 8.7264757 8.8677522 12.623684 6.340822 8.894420 12.171533 10.656921 10.319332 10.530434 10.783587 9.297518 10.642048 12.948073 9.385686 9.828878 8.261094 NA 7.416373 10.638108 11.407374 4.556552 8.964054 8.609018 6.659643 10.097145 6.301509 6.040068 10.133700 8.618646 5.609019 5.621841 6.043027 12.727866 10.834053 8.165798 8.678180 10.848446 6.755860 9.578096 10.619046 10.698374 9.989634 10.491661 9.562383 NA 9.912499 8.195654 8.018409 11.629204 10.117379 10.679331 10.585071 6.714552 14.168700 10.375783 11.188603 12.636924 10.188064 9.590381 4.261094 TCGA-BH-A209 77 1 3959 NA breast stage i t1c n0 m0 2-10-2014 female 1996 NA NA medullary carcinoma yes 0 black or african american not hispanic or latino 136.49.0 NA NA 4 5 NA NA 2 3 1 3 2 1 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595753e-06 6.591155e-07 11.2235432 6.4960692 7.1741407 10.6448165 NA 10.7415049 NA 9.2497298 11.8639672 8.3228885 10.4889564 7.9848707 8.6464158 9.7630399 7.9645026 10.4161437 8.8791219 10.1351874 7.9069615 5.2768279 10.1577888 8.7883679 8.2836936 10.7176166 9.7160944 10.8975921 8.1741412 10.9303331 -1.7568184 3.1975981 9.4152060 10.6855697 13.3083569 7.4960692 10.9266176 12.1212629 9.8217764 6.1562935 3.1975981 7.0699524 9.1129974 9.6173563 5.5653321 12.6273104 4.1975981 12.0634829 13.4958473 7.7999097 9.3027481 11.1968726 6.7392581 4.1741427 NA 13.4410458 12.7963795 2.9438463 8.6602013 NA 6.4430762 9.7694137 10.2591671 9.6206143 10.3195512 9.5709564 9.5007915 2.4133233 10.8908621 9.4127024 3.7028348 7.9438434 11.5497502 10.5582701 13.6727450 7.8587022 11.3153687 10.3331851 10.1667311 0.5653047 NA 8.5596853 9.2939325 10.2768266 -1.7568184 5.1741427 7.7292333 10.2591671 10.8631651 6.0443045 8.4007505 5.8800292 9.8645398 11.8143266 1.9438463 13.8572507 4.4528590 7.4479750 11.2528824 12.1118404 13.4124674 7.7352568 11.1256646 10.8414562 10.0053704 10.9738738 4.1502916 8.3829551 12.0959332 10.6578246 -1.7568184 10.5537324 10.3739742 1.8283472 4.9743136 9.4859824 11.3155362 10.2317334 8.9386319 15.0786152 10.5339986 10.9662112 7.8075533 9.1866511 14.1429966 6.6442832 12.0453141 11.6645480 10.0877171 8.7482227 8.4282789 10.2348547 -0.0010658 0.5878100 0.3535400 0.0898960 0.1094000 -0.0996950 -0.0758370 1.4165000 0.0525690 1.2311000 0.1069100 2.2842000 0.1470100 -0.0662100 0.1340200 0.1340200 0.1340200 0.0581930 0.0581930 -0.3173500 -0.0879850 -0.0639300 -0.2690900 -0.2690900 0.1549100 0.8414600 0.2695500 -0.2644000 0.0000000 -0.1349300 -0.0010658 0.3392300 0.0926500 -0.2071800 -0.1077500 -0.3555200 -0.3555200 0.9868600 0.0525690 0.0338750 0.1367700 0.1155500 -0.5531300 0.8192900 -0.3051100 -0.3051100 -0.2523300 -0.0662100 -0.1028500 0.1340200 0.1340200 0.0581930 0.1525300 0.1525300 -0.3296800 -0.0879850 -0.0639300 -0.2849700 -0.2690900 -0.2690900 -0.3059300 -0.2598300 -0.2644000 0.1480600 -0.0177290 -0.5035600 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.114 0.155 -0.239 -0.239 -0.258 -0.258 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.321 0.321 0.000 0.000 -0.446 0.990 -0.305 -0.305 -0.103 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.114 0.155 -0.239 -0.239 -0.258 -0.258 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.321 0.321 0.000 0.000 -0.446 0.990 -0.305 -0.305 -0.103 10.3064616 12.1423829 5.1502956 8.1427606 6.0097995 8.3855108 5.7028348 -1.7568184 8.9662113 7.9593656 NA 8.1260467 4.7979935 11.5209817 9.9122886 4.9576500 9.7917439 9.1487908 7.8283663 9.3765459 8.7568945 7.3778300 10.5754402 3.6009595 10.2019564 9.5007915 2.2433949 NA 10.6738562 2.6357312 13.7853775 12.2356339 7.3388006 9.7845002 11.3636415 8.9730243 3.7669661 3.6357196 NA 7.4007505 9.2292457 9.0881095 10.1480382 3.9713228 5.9557940 6.2149466 10.4273491 4.2657744 9.8818396 NA 12.4014610 3.7669661 4.7825606 10.6873263 7.9186021 9.1044905 9.6474807 9.7635313 10.1454018 -0.1716934 14.2405831 2.5653291 10.3384710 NA 10.1611486 3.5288088 7.3255528 8.1562930 13.151280 7.063583 8.649609 10.926618 10.206860 11.205938 12.627310 10.992016 9.454075 10.793669 13.117761 12.200596 9.293933 8.182983 3.669673 8.210630 11.508872 10.2381107 6.6612565 9.0337523 9.5299615 9.1214545 9.4154435 8.6216984 6.9507623 10.7176166 4.9158268 1.2434254 5.0378215 8.3291285 9.7155868 11.4275041 8.8691126 10.0611867 10.1903099 10.0833948 9.6206143 10.5610989 11.0757004 8.9167128 10.4292083 9.1313858 -0.1716934 9.5537211 7.5869223 10.7803793 10.8631651 9.7566377 10.7445218 9.8645398 7.9593656 14.8659846 10.8168142 11.0278340 12.2582087 10.1939596 9.6940995 4.9438416 TCGA-BH-A28O 50 0 NA 324 breast stage iiic t3a n3 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 14 white not hispanic or latino 227.33.0 NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 11.2073836 9.3454988 6.7416557 11.5782812 2.0162110 10.4352148 1.3641241 9.4455239 11.4207732 10.6100278 9.7662339 7.9318201 8.7637950 10.4801081 6.6705231 8.8536969 10.7109658 9.6815482 8.6295832 2.5567727 11.6988876 11.2763833 12.4926823 11.3926336 9.6705228 10.3665488 5.7759487 10.0105656 1.3641241 2.7267005 8.6613794 13.8849296 12.9053013 8.3116679 12.8938449 12.2210056 10.7647101 7.2778797 5.0803421 8.6455687 9.4485642 10.6107065 9.5124306 11.1438549 3.5109746 10.5007605 12.3808443 8.1770004 9.8564809 10.1902300 9.6639976 5.2847029 NA 14.0266949 11.3518056 3.0803507 9.1152013 3.2572219 5.0803421 9.9544552 9.6976103 9.5160581 11.0128783 9.8467995 10.7756465 3.0803507 11.2424054 10.9377827 7.6228696 7.3016142 7.2221167 9.3633301 15.3145222 8.3264861 11.0197940 10.9833075 7.9296454 2.8047144 0.5567972 8.9882782 8.7254528 12.9598592 0.8786861 3.8047041 7.5138823 10.0650706 11.0463777 7.6066295 6.5454649 4.5340616 9.8685289 11.9200941 2.0162110 13.1865356 5.4636715 7.5511338 12.7169672 13.0379493 12.7019167 8.0385799 10.4256031 10.7487651 10.9364974 11.4860390 4.8235660 8.7304576 11.2006368 11.8789904 1.3641241 10.4614152 8.7014389 2.0162110 5.5801455 9.7927948 10.7717068 9.9421038 8.7576794 14.7568746 10.6594125 9.0852348 8.4845587 5.2292072 14.6384721 9.6587563 13.1057229 13.7392913 9.9725224 10.2375796 8.0506361 10.1951577 0.03574900 0.03574900 0.12035000 -0.00152430 -0.00152430 0.00000000 -0.00152430 0.00027728 0.00027728 0.00083195 0.00083195 0.00083195 -0.00622860 0.00000000 0.00013863 0.00013863 0.00013863 -0.00290910 -0.00290910 0.00138680 -0.00166290 0.00097064 -0.00097017 -0.00097017 -0.00097017 0.00319100 0.00319100 0.00250950 0.00055459 0.03574900 0.03574900 0.00013863 -0.00152430 0.00000000 0.00000000 -0.00152430 -0.00152430 0.00027728 0.00027728 0.00027728 -0.00719580 -0.00733390 0.00083195 0.00110930 0.00110930 0.00110930 0.00110930 0.00000000 0.00000000 0.00013863 0.00013863 -0.00290910 -0.00290910 -0.00290910 0.00138680 -0.00166290 0.00097064 -0.13523000 -0.00097017 -0.00097017 0.01251600 0.00319100 0.00250950 0.00055459 -0.00373950 -0.00097017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.1613337 13.4337771 5.4875185 11.2765972 4.3904269 11.0220919 2.8787057 2.8787057 9.0566266 10.6168010 -0.4432028 8.7404159 5.7366888 9.2247790 10.0033470 3.6442485 9.8153466 9.6789615 11.5613522 10.0395886 9.7191468 7.7241987 11.7642526 2.1417271 9.6809019 10.7756465 6.3705619 -1.4433989 10.6309221 5.3896701 12.5726312 12.1134064 8.4500821 10.4576474 8.1696490 9.3584890 6.0243862 1.1417597 0.5567972 2.1417271 8.8966306 9.6449063 9.3944085 6.9187249 9.4733244 7.5225651 10.3495708 5.5109777 9.8294104 0.1416944 12.6042454 3.7267005 5.3249654 9.3469172 5.7659404 6.6653046 9.6633436 8.8787088 9.0416036 0.1416944 14.1652953 3.0803507 10.8162296 NA 7.7759493 7.4576476 7.2847010 8.6025404 12.3012455 4.3641382 8.5833040 12.8938449 10.5160581 10.0486337 11.1438549 11.8599905 9.0984482 10.5369202 13.4205797 12.7196439 8.7254528 8.1417429 0.5567972 8.0059293 10.4659237 11.579495 6.207832 8.641589 9.424831 7.107528 10.360242 7.576371 7.849102 11.392634 7.542623 5.991408 8.214992 6.434587 12.044872 10.388484 8.428686 9.352009 10.318332 6.528324 9.516058 10.366549 11.349571 10.741966 10.742275 8.422514 NA 9.861845 7.625344 8.898855 11.046378 6.222117 11.749536 9.868529 6.771100 14.637119 9.920368 10.585032 12.671824 10.935888 10.114244 3.141743 TCGA-BH-A28Q 46 0 NA 196 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 147.48.0 NA NA 3 2 NA NA 1 4 2 3 5 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 10.82346899 8.06958618 6.62901412 11.54068074 -0.98564471 10.90874259 1.01428387 10.33510436 12.07229549 10.42554994 9.82768408 8.04772650 9.16405086 9.59597520 7.60114381 9.60956125 10.55006510 9.28343034 6.82487603 1.71475106 10.57821501 9.84877487 8.22497504 11.75798113 8.98584734 10.48724837 5.03667036 10.84461099 -0.98564471 5.15385397 8.27874633 12.09095238 12.69339894 7.05596240 13.28244366 13.71674704 9.86253539 7.65635550 4.35415592 6.16912128 8.34634042 11.33806222 7.09111904 13.18766859 2.96849631 9.27463533 13.75979427 6.72510991 9.47656072 11.06568264 6.47782787 6.68672882 NA 12.87716724 10.76522003 2.26222266 9.01430368 -1.98564471 4.26223018 10.22983675 10.75787599 10.70277267 11.41971116 10.11233589 9.94688756 3.29969891 12.02788814 10.33143371 6.84719393 8.71040180 4.16405413 11.17527814 14.86361111 8.43368475 11.97999787 11.83478191 7.36081724 3.14358934 4.38934654 9.53541342 9.54568521 11.43044152 NA 5.36303087 7.28108989 10.06245001 11.22330012 4.75576888 5.80871968 4.67251586 9.83008733 12.08299807 1.59927018 13.40080623 6.41944451 7.59550441 13.95321712 12.12013045 13.14036288 8.04220984 10.54324618 11.17779623 11.08999680 11.61653864 5.50615760 8.50214360 12.10912372 12.91002104 NA 10.14165337 9.40070528 1.92120780 3.33515450 10.15193541 11.11266489 10.00794979 9.62993340 14.72239074 10.42289891 9.92269634 8.52209853 0.01435529 15.84002033 9.09312173 13.50239494 12.80658569 10.29304360 9.64092545 8.86370899 10.78074988 0.85938000 1.10650000 1.23240000 0.00124810 0.00124810 0.02132300 0.07159500 -0.02370300 -0.57011000 0.07527100 0.07527100 0.07527100 -0.01560400 -0.01560400 -0.01367700 0.52293000 0.54083000 -0.03939400 -0.00705760 -0.49402000 -0.01064600 0.03622900 -0.05778900 -0.05778900 -0.05778900 -0.00664320 -0.00664320 -0.00664320 0.58775000 -0.05725600 -0.00484610 -0.05033700 0.00124810 0.02132300 0.02132300 0.07159500 0.06441700 -0.02370300 -0.57011000 0.00013863 0.07284500 0.05995800 0.07527100 -0.01064600 -0.01064600 -0.01064600 -0.05153700 -0.01560400 -0.01491600 -0.01367700 -0.59409000 -0.00705760 -0.00705760 -0.00705760 -0.49402000 -0.01064600 0.03622900 -0.71623000 -0.05778900 -0.05778900 0.00208050 -0.00664320 -0.00664320 0.59512000 -0.01491600 -0.07747800 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.51215576 12.77699723 9.31293921 9.82004761 4.26223018 10.96813641 2.10175091 -1.98564471 8.50415160 6.69378383 NA 8.13206371 1.82166940 10.08408912 9.43215623 0.59922256 9.19296863 10.20227433 11.12429763 10.35970905 9.89258850 8.19545588 10.27198620 4.12283007 9.78909082 9.94688756 7.03944331 -1.98564471 10.14680348 2.92118875 12.53473830 12.11906630 7.93316718 9.44423347 7.20906047 9.14423072 3.18423268 0.01435529 0.01435529 8.41731583 8.47065806 9.03597794 9.60208120 4.47373497 8.55821520 6.78248851 10.18954143 7.81034348 9.61235619 NA 9.61002748 2.18421681 5.35415239 10.01162087 7.03897275 3.50615760 8.70517480 7.55733580 5.33623339 -0.98564471 13.80276722 0.59922256 9.79196999 NA 8.87383842 5.01430173 7.88158265 8.89541775 13.360278 3.769190 9.644116 13.282444 9.758297 11.041000 13.187669 12.449518 10.017702 11.330698 13.930276 11.282700 9.545685 9.437420 1.599270 7.204128 11.859206 11.41531655 7.35415415 9.15577225 9.25211119 8.29159113 10.53263479 6.42369413 7.97285633 11.75798113 4.82165920 0.01435529 9.91366061 6.31241287 12.84511604 9.93837402 9.23518375 7.70430208 12.84184496 5.64365997 10.70277267 10.26608200 11.58889730 10.03389455 10.80485590 9.08106581 -1.98564471 8.74692070 8.21996275 5.37185504 11.22330012 7.38499091 10.69611313 9.83008733 7.73198014 14.20592208 9.87577837 9.62993340 13.27441472 10.77002589 9.77793105 2.01431958 TCGA-BH-A2L8 45 0 NA 612 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 9.886732e-06 3.434339e-06 10.9590664 8.2170630 8.5302631 11.4850919 NA 9.6741193 0.1067503 9.4577363 11.5495678 8.3751442 9.9114658 7.6511177 8.6549768 9.5838806 7.0687288 9.5545691 10.0614780 9.7500519 8.2222742 5.7410031 10.9074273 10.2144500 11.6256141 11.2929112 9.4861754 10.3459977 8.2257381 10.2257381 -1.4783462 8.7054700 8.9173688 10.9317557 12.2781824 8.0706566 12.4503529 11.8846002 9.8210426 7.5662284 4.3291882 7.3673248 8.1674929 8.6601065 7.7264055 12.8091140 6.4584722 10.6782337 12.3374179 4.0136856 9.9685974 10.3166565 8.5147728 7.6119469 1.9812682 14.6493054 11.6759738 0.1067503 8.7542555 NA 3.5218297 9.4569995 9.7245706 9.8014452 11.6034844 9.7104233 10.3622190 2.7697717 10.0850308 10.0874127 8.3097369 7.8683485 7.8233309 10.7098052 14.9475586 8.3162340 11.1845029 10.4610464 9.2607711 1.1068173 2.1067838 9.2649858 8.2867061 11.8625192 NA 5.0296296 6.8210430 10.6623448 10.2127055 10.2775566 7.2326406 5.9812659 10.2675089 11.9671081 2.9812682 13.3964317 9.3162503 9.5295627 12.3124885 12.5345463 12.6178908 8.2188020 10.4614138 10.8661305 10.2145895 10.6440154 4.1656869 9.0792981 11.3805926 11.4885202 -0.4781452 10.5122931 8.8727737 1.1068173 6.3928154 9.4983987 11.1103150 10.3459977 9.0897905 14.9406919 9.9919849 9.2420787 7.9606264 2.1067838 15.2083487 7.8095469 13.1049761 13.3656575 9.9930016 9.6613858 7.5525016 10.1998756 0.00527490 0.32012000 0.31771000 -0.00277070 -0.00277070 -0.00912860 0.31851000 -0.00429290 -0.00429290 -0.00484610 -0.00484610 -0.00484610 0.00249690 0.00249690 0.00027728 0.00027728 0.00027728 -0.00040652 -0.00040652 -0.00650500 0.00152550 0.00791750 0.01391100 0.01391100 0.01391100 0.02104300 0.02104300 0.02104300 0.01126100 0.00527490 0.00527490 -0.00083160 -0.00277070 -0.00912860 -0.00912860 0.31851000 0.31851000 -0.00429290 -0.00429290 -0.00429290 -0.00401620 -0.00498440 -0.00484610 0.00291330 0.00291330 0.00291330 0.00291330 0.00249690 0.00249690 0.00027728 0.00027728 -0.00040652 0.00000000 0.00000000 -0.00650500 0.00152550 0.00791750 -0.32228000 0.01391100 0.01391100 -0.00013862 0.02104300 0.02104300 0.01126100 0.00360760 0.02020300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1058575 13.3655103 7.5048277 9.7868634 3.8999973 10.3459977 5.0453949 -1.4783462 9.0296293 8.3356159 1.6917575 8.2095075 3.9141531 10.6277431 9.2283305 3.5662307 9.3307986 8.7190513 9.7880354 10.0590529 9.3538779 6.5386421 10.2347913 3.1068006 7.0296296 10.3622190 6.4347233 NA 10.6854842 3.5218297 13.3185839 12.2207562 7.8437628 9.9637413 9.4082932 9.6530484 2.3291810 3.0453905 0.1067503 12.9011452 9.3633989 10.0136877 9.4377138 5.6092970 8.5345289 6.0840770 10.3894994 4.5879230 9.3452019 -0.4781452 10.4158944 3.5218297 3.1068006 9.6784359 6.6099337 6.1656909 9.9354624 9.0335871 9.0648664 -0.4781452 14.2667209 0.8437427 10.2253055 NA 8.8793866 3.8072416 8.2446421 9.4760309 12.198570 5.566228 8.314625 12.450353 10.220973 10.693637 12.809114 11.352944 9.448679 10.173783 13.071318 11.171764 8.286706 8.799122 2.106784 7.001614 10.220105 11.1869483 6.6407756 8.6664800 9.0754639 8.4105777 9.9362291 8.6677666 7.2933236 11.2929112 7.5358547 0.5218548 5.2083339 7.1733164 10.9851035 10.6345998 8.8780224 9.2100849 9.8837783 7.6741195 9.8014452 10.6303590 11.2448554 9.4136182 10.4683753 8.4672783 NA 9.9288155 8.1278324 8.1030349 10.2127055 6.5932970 11.0028771 10.2675089 7.1442891 14.6208535 10.3527458 10.4562625 12.6457134 10.9985807 9.1755752 3.4287186 TCGA-BH-A42T 75 0 NA 30 breast stage iia t2 n0 (i+) m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes NA black or african american not hispanic or latino 255.29.0 NA NA 1 3 NA NA 1 1 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.668684e-07 11.12010741 6.64947751 6.17681742 12.29269247 -1.64972908 9.00758797 NA 8.97415098 10.74794421 13.17343778 9.62581220 6.45879374 9.17919951 10.09636399 7.71440421 8.84612470 8.91251215 9.35097387 6.23901226 1.52019593 10.91917574 10.77705850 10.93523210 12.72849669 9.42641719 9.87725775 5.91251095 10.65944751 -1.64972908 -0.06476658 7.10515738 9.87530089 13.06440776 7.80559685 14.29456986 12.81085348 10.91965054 6.53514471 2.99412711 9.22985273 8.34886003 9.98553430 7.22678691 12.38179851 1.52019593 10.86867689 14.29278409 6.51517627 9.59455023 11.09468302 8.95574899 5.13163064 1.15762585 14.06053201 11.46058977 2.05071064 8.48212667 NA 2.25716152 8.56458852 10.01382763 8.98508055 9.49365274 9.08667153 9.67613709 0.67219902 9.53638380 10.74392817 6.46401146 7.60293487 3.20825192 10.02357861 14.21860988 5.94354865 10.13162935 10.19536753 8.51140162 1.93523342 5.59819844 9.79010050 8.56458852 9.61529858 NA 5.51014226 7.84212276 10.01604956 10.55880879 4.02269627 5.39466504 6.11845317 10.00176988 11.94260984 2.99412711 13.05552397 5.75115036 7.10515738 11.29058320 13.90749394 12.26624229 9.97460818 11.08772822 10.90940763 10.34400412 10.15923371 5.47955394 9.78072216 11.20416389 12.39338233 -1.64972908 10.40859957 9.36846979 -0.06476658 4.02495790 7.93523225 10.74151317 9.81021349 8.40826137 14.82529049 10.48758101 9.13490449 8.19889239 0.67219902 14.53810490 7.84011763 13.07403717 11.80122305 9.71768430 9.01204762 7.87383165 10.56026509 -0.6809200 0.7100800 1.3609000 -0.7070800 0.6792300 -0.0165840 0.0965750 0.0254390 -0.0210690 0.7113900 0.7113900 0.0217920 0.0328930 0.0328930 -0.6864800 1.6438000 0.0677110 -0.0407050 0.0081047 -0.0108080 -0.7062700 0.0637020 -0.6736700 0.7697100 0.7697100 0.0637020 0.0637020 0.0637020 0.0723020 -0.6809200 -0.6809200 0.0744580 -0.7070800 0.0352900 -0.0333580 0.0000000 0.0000000 0.0254390 -0.7488700 -0.0137680 0.0127030 -0.7254100 0.6960300 -0.7073500 -0.7073500 -0.7073500 -0.6638900 0.0328930 0.0328930 -0.6864800 -0.6918900 0.0107510 0.0081047 0.0081047 -0.0108080 -0.7019300 0.0512940 -0.6709100 -0.6736700 0.7697100 0.0088008 0.0637020 0.0637020 0.0723020 0.0129820 -0.6508700 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 8.55972314 13.11265163 8.01560573 9.90101635 2.12214258 11.20162823 2.67219902 NA 8.72422222 8.29571338 0.35027092 7.96681861 6.64489023 10.78255051 9.99412584 3.39466504 6.75541105 8.77233437 8.32181313 10.54871462 9.73381189 6.39466333 10.66059835 3.90485978 6.37817519 9.67613709 2.43773377 NA 11.65076514 2.93523342 12.81634605 12.28045251 7.06451536 9.08751694 7.39739312 10.54963519 4.70782293 -0.06476658 0.35027092 2.74258835 10.28026759 9.89619933 9.37194366 5.18316094 9.45447512 9.08920628 10.12052056 5.42708652 9.58388929 -0.06476658 11.27915803 3.20825192 2.99412711 8.50774272 6.87727677 0.93523342 9.47955253 7.28396065 5.18316094 -0.06476658 14.16835241 1.35027092 10.35484122 NA 8.35026960 3.99412711 7.64028832 9.29936671 14.544846 7.515176 7.922022 14.294570 9.655761 11.541175 12.381799 10.135722 9.183974 10.381971 13.260303 12.479231 8.564589 10.235585 4.232914 8.267642 11.329337 10.8408698 6.1704479 8.2344400 8.9631380 9.8649836 9.4510435 7.8580643 5.4270865 12.7284967 8.8501156 0.6721990 7.3131660 7.3979390 9.8330776 8.9557490 6.7638975 9.4834117 10.0253445 4.9941271 8.9850806 10.0794654 11.5195683 10.2695054 9.8204201 6.8933015 -0.6497291 9.0086508 5.6144301 3.8097025 10.5588088 4.3726387 10.6307504 10.0017699 7.6654191 13.5558720 9.8918502 9.6851015 12.7218421 12.0428851 9.1487415 1.3502709 TCGA-BH-A42U 80 0 NA 3324 breast stage ia t1a n0 mx 2-10-2014 female 2004 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 255.29.0 NA NA 2 5 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 0 11.3838030 7.9327132 6.3477507 11.4261734 1.3349115 9.1982282 NA 8.5623710 10.6946765 10.7355014 9.1321252 7.4254173 8.9047824 10.4174561 6.4991156 8.6043875 9.8083427 9.4471802 8.0898143 5.2280106 11.4421440 12.3136374 12.2989583 11.2219299 8.9992472 10.2048512 7.1459576 9.3048272 0.8495189 1.5275708 7.9622002 13.7037062 12.8209718 8.4612625 12.9848888 11.6333169 11.6188421 8.2520859 4.1125333 8.6974969 9.0123949 10.4067723 9.5069972 11.6298758 NA 11.2512330 12.7351965 8.4071551 10.1574249 10.5331966 8.4147926 3.4344681 NA 15.1981620 12.6013479 0.8495189 8.7382433 -1.4723291 4.3604626 9.0393246 9.1946835 9.1999974 9.7345863 8.7849600 10.9554086 3.2280183 10.1541937 10.3329129 6.7515735 6.8807186 8.1274847 9.5609950 14.9894671 6.0897375 10.0144070 9.8612864 7.8449844 3.4817639 5.4464349 8.3493458 7.5609954 12.1369816 0.8495189 3.5275708 7.4254173 9.9606358 10.6100538 7.5019868 5.8494989 3.6150396 9.2949288 11.7790544 2.2280183 13.4578474 6.3413525 7.1714280 12.0062153 12.8012948 11.9497682 8.9166656 10.5804796 10.4144117 10.4817684 10.3240172 4.8129756 9.4374652 10.8296397 10.9297847 -0.4723291 10.6735041 8.6030510 1.8495189 3.1125333 8.8002017 11.1434315 9.2520859 8.6785885 15.4305594 10.1298069 8.2791161 7.7149241 5.4344614 14.4728329 9.5623710 13.8297111 13.4030334 9.5485520 9.9844398 7.1050012 9.6687467 -0.00193990 -0.00193990 -0.00193990 0.00638710 0.00047492 -0.06316600 0.00291330 0.00013863 0.00013863 0.00115300 0.00115300 0.00287220 0.00298230 0.00298230 -0.00168930 0.00361620 0.00361620 -0.00041585 -0.00041585 0.00152550 -0.00069303 0.00610900 -0.00723870 -0.00723870 -0.00723870 0.08569300 0.08569300 0.08854800 -0.00249380 -0.00193990 -0.00193990 0.00249690 0.00638710 -0.06316600 -0.06254900 0.00291330 0.00291330 0.00013863 0.00013863 0.00013863 -0.00484610 0.00000000 0.00115300 -0.03721800 -0.03721800 -0.03721800 -0.03721800 0.00298230 -0.00127090 0.00208050 0.00361620 -0.00041585 0.00346870 0.00346870 0.00152550 -0.00069303 -0.03142700 -0.08505900 -0.00124730 -0.00723870 -0.09102300 0.08569300 0.08569300 -0.00249380 -0.00097017 -0.09340300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.4715519 13.0905299 4.9870025 10.9910964 5.2690406 10.9353709 6.2280125 2.5275708 9.4494130 9.7926010 0.1125000 8.5582393 6.1200284 9.5527116 9.8279246 3.2824546 8.8347728 9.1228295 10.2778603 11.3169019 9.3554229 6.5882679 12.2099083 2.3349401 9.6849190 10.9554086 6.3979364 NA 10.8787873 4.2554932 13.4045206 12.0187988 8.7309201 9.7173966 8.5609950 10.0565144 4.1714310 1.1125667 0.1125000 5.9538379 9.7358063 10.7503669 9.1560176 5.9951770 9.2545650 9.0735019 10.3329129 5.1714270 9.7861381 0.8495189 12.0874271 2.5275708 3.8129705 9.3268537 7.0663433 7.0274184 10.3252335 8.3525308 9.1228295 1.3349115 14.2376520 -1.4723291 11.1937960 NA 7.8807186 6.6722301 7.8629621 9.5098526 12.607549 5.097430 8.105001 12.984889 10.325639 10.316698 11.629876 10.848936 8.992118 10.067700 13.603845 12.970062 7.560995 8.390209 1.527571 8.082161 9.647810 10.991096 4.812976 8.948585 9.240958 6.682391 9.423125 8.074466 8.576059 11.221930 7.070604 2.697507 6.844984 6.363875 10.955932 10.282459 8.098794 10.302771 5.334926 7.299061 9.199997 10.793480 10.544728 10.412887 10.090768 6.308932 NA 9.629948 7.069250 8.545772 10.610054 5.707481 11.542116 9.294929 6.789667 14.638687 10.014407 10.460525 12.373160 11.064062 9.000263 2.334940 TCGA-BH-A42V 41 0 NA 272 breast stage ib t1c n1mi m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 255.29.0 NA NA 2 5 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 8.343418e-08 11.0867586 9.5503968 7.0523702 11.8131044 3.0774652 9.9495254 -1.7804133 9.0507871 11.4714061 10.8221788 9.4685933 7.9893179 9.2307071 9.7307384 5.6031842 8.5868946 10.8725489 9.4530996 8.1005940 5.1263700 12.0835693 11.1937153 12.9593660 11.1616279 9.4209912 10.3145472 6.6830044 9.9814466 2.1263782 2.2194938 8.4080686 12.6203593 13.2241393 7.5836146 13.3481590 12.8982451 10.3912822 6.7272752 3.7113297 7.4434815 8.8091311 10.3723984 8.2307074 11.7798127 2.2194938 10.2986313 13.1712655 6.0586845 10.1763497 10.6814709 7.8542912 6.9059802 NA 13.9504446 9.1278726 0.8044666 9.2929522 1.5414157 4.7740701 9.7902843 9.5492762 9.5186880 11.7450007 10.0755163 10.5057488 3.5770300 10.9210030 10.7747880 7.5118017 7.1852640 10.0883025 11.5139571 14.9874574 7.5163044 10.9952959 10.4617609 7.6768605 2.0268355 5.7586390 8.0696667 8.4956044 11.6454825 -1.7804133 4.5414095 7.4862663 9.7959643 10.5907120 9.5836146 6.1502164 4.1021206 9.7346869 11.9126401 1.3894016 13.2979643 5.8119359 7.8231061 12.0804699 11.3962764 12.7327757 8.0444389 10.7704672 10.5742803 10.6943899 10.9835222 4.9473997 9.5515164 11.4639924 12.2178940 NA 10.4727365 9.3253884 2.3894016 4.6305686 9.5089224 10.6901388 10.0859861 8.8588206 15.3702486 10.3135576 9.3513368 8.6634595 4.1263700 15.5549401 7.6267479 13.6398349 12.8964287 9.9072930 9.7692646 7.9251123 9.7979611 2.9784e-03 1.2481e-03 3.3299e-03 4.7744e-05 2.2193e-03 -8.9824e-03 2.0903e-02 1.7996e-01 1.2093e-01 3.9055e-01 3.9055e-01 4.1078e-01 4.1593e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -2.2168e-03 -1.2989e-02 -1.2989e-02 -1.2989e-02 -2.7707e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 2.9784e-03 2.9784e-03 -4.1585e-04 2.2193e-03 5.6919e-03 -4.2652e-04 2.0903e-02 2.0903e-02 1.7996e-01 -3.6340e-01 -3.6306e-01 -7.8863e-03 -1.4916e-02 -3.7065e-01 -2.5072e-02 -2.2881e-02 -2.2881e-02 -2.2881e-02 9.7064e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -1.2473e-03 -3.5407e-01 -1.2989e-02 -1.2989e-02 2.2193e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 -3.4359e-02 4.1317e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.000 0.000 -0.352 0.391 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.000 0.000 -0.352 0.391 0.000 0.000 0.000 9.4495003 13.1934911 6.5232608 10.2939559 4.8341904 10.5912566 4.4289329 0.2194628 9.1671168 8.9651543 -0.7804133 8.0786264 5.3280035 9.7386246 9.7464681 2.8633438 9.7459791 9.3201423 9.7238024 11.5893498 9.3680391 7.1881467 11.5633596 2.7430410 9.9264075 10.5057488 7.6992601 NA 10.9248963 6.7391163 13.6512387 12.1707646 8.3831297 9.8124040 7.8378657 9.6613866 3.9474043 2.3894016 -0.1956160 0.5414157 9.8166013 10.1663862 9.9722787 6.5548697 8.9224577 7.7683021 10.5278190 5.5770330 9.5543118 -0.7804133 11.0177492 3.3487565 4.6624220 9.9021849 6.7451176 6.0332622 9.5487156 8.4386484 9.5781311 -1.7804133 14.1794592 1.6789283 10.5278190 1.0268001 8.4289334 6.1852640 7.4932759 8.1780329 12.223330 4.743041 8.784582 13.348159 10.412389 9.887035 11.779813 11.786366 9.330955 10.204610 13.060061 11.929318 8.495604 8.111263 1.026800 7.850657 10.327024 11.240980 5.695214 8.584709 9.092924 7.440004 10.316333 7.404356 8.293622 11.161628 7.317512 5.933726 7.795019 6.555496 10.777901 10.050787 8.083666 9.358392 10.529809 7.036464 9.518688 10.850430 10.816369 10.605612 10.357752 8.364138 -0.195616 9.690469 7.006599 7.721317 10.590712 5.727275 11.285233 9.734687 6.919990 14.599247 10.158324 10.642070 12.333303 11.150217 9.778379 2.389402 TCGA-C8-A12K 80 0 NA 0 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 asian not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.636462e-06 8.672572e-07 13.0507320 -0.6968914 5.4929395 10.8340099 -0.1118510 9.9201242 -0.6968914 8.8422746 11.2768133 9.6732584 8.9306498 8.0779031 7.5295282 9.4966413 9.5468850 9.1168970 7.5101304 10.8524193 8.7697023 5.2688984 10.7987211 12.1273786 13.4155554 9.8629710 10.4484112 10.6789699 8.0462673 10.6669742 7.2249567 -1.6966576 9.2988830 9.7066606 13.1152932 7.6429658 10.8185694 11.1208991 10.6792413 8.4917048 6.0779031 7.5174348 7.8748683 10.4702204 8.7314762 6.8148683 NA 12.1777131 9.8069417 7.7522642 9.3184472 10.3254837 6.9469718 7.4011483 2.7625402 14.7613589 14.2924394 -1.6966576 8.6227880 NA 5.3799328 9.4181596 9.9233358 8.7314762 9.7465775 8.6759810 10.3379149 3.8880808 10.5957251 10.1292672 5.3692047 7.5605040 -0.1118510 7.5954373 14.3548559 6.8690941 11.0748117 9.8691700 11.9991054 1.4730595 NA 7.9737720 9.0225049 10.0538229 -1.6966576 3.3031232 7.5908280 11.7784694 11.0586294 5.9755408 7.9896165 6.8843171 10.0995611 12.2889578 -1.6966576 13.2030864 4.3254872 7.2160057 10.2547649 11.0257100 12.7536828 5.9755408 9.5780764 11.5990283 11.1929792 11.3291206 4.6429672 8.1765601 12.2898468 8.0877508 -0.6968914 10.5569634 9.4298203 0.6250834 2.0090963 9.2896690 11.2683591 10.3644871 8.9631117 15.1685230 10.7162149 10.0022546 6.9861105 1.6250366 12.2404897 5.5415210 12.4944065 11.6351524 9.4655072 9.1383768 8.0104750 9.6415236 0.0814660 0.0690950 0.0468420 -0.4472800 0.2642000 0.6106300 -0.4745900 0.7358700 -0.4405900 -0.0873700 -0.0873700 0.7326500 0.6623500 -0.0644340 0.0668020 0.0334080 0.0334080 0.5620500 0.0829090 0.1067200 -0.4178400 0.4873300 0.0549450 -0.4776500 0.0030522 -0.0319050 -0.0417020 -0.0417020 -0.0280810 0.0227250 0.0781590 -0.4612500 -0.4472800 -0.0011087 -0.4546900 -0.4745900 -0.4540400 -0.4872200 -0.4405900 0.0995790 0.1180000 0.0556580 -0.0873700 0.2471600 0.2642000 0.2642000 -0.4760700 0.0520260 -0.4841800 0.0081638 -0.4326800 -0.4345300 -0.4574700 0.0126550 0.1521800 -0.4347400 -0.4767000 -0.0019659 -0.5066000 -0.4776500 -0.0131220 -0.4671700 -0.0417020 0.0445740 -0.4383200 0.5471800 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 9.3213162 12.7481308 0.6250834 8.2775306 1.6394174 10.8679799 2.4730336 -0.6968914 8.8276577 8.8509744 6.4011475 7.5838868 1.1104969 11.3372271 9.3101431 -0.1118510 5.9966034 9.7039954 7.0378259 9.4978728 9.1977973 6.7335686 10.8644038 4.5319366 9.1994483 10.3379149 2.2100147 NA 10.5376340 2.6954371 13.1019421 12.8274740 7.3718942 9.3792633 11.0513087 10.2573122 3.4730465 4.7293787 -0.6968914 5.6250454 9.2861095 9.3651621 7.0513090 0.6250834 6.8535928 7.4426674 9.8354719 4.6606663 10.0169319 3.3031232 12.2802169 3.2099991 4.7625455 10.0853976 6.4593513 6.5076868 10.6490755 9.6732584 8.2674567 1.8880711 14.4162476 2.1104635 11.0781088 NA 9.1964175 2.8266807 7.9397408 9.0471086 10.956212 8.602324 9.068816 10.818569 10.360431 11.531784 6.814868 11.477417 9.184995 10.907783 12.713700 11.879482 9.022505 8.173481 3.826681 8.267457 11.224771 9.7589569 4.9324723 9.0671498 9.5581444 9.1755523 9.2699170 8.0445826 5.1486047 9.8629710 11.0329490 -0.6968914 5.7949694 9.9108716 12.3685321 11.3975236 8.0926493 8.8286367 8.9269975 7.6182658 8.7314762 10.5079927 12.0075599 10.1320457 10.0479497 8.0975318 NA 9.4352364 7.6353764 7.7849155 11.0586294 7.0513090 10.7556146 10.0995611 7.8059076 14.4947150 11.3330933 10.6000321 12.4393861 10.2846832 8.5331362 1.7625614 TCGA-C8-A12L 67 0 NA 363 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 4 3 4 NA 1 5 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.838585e-06 4.162835e-07 11.9743227 0.6625701 6.4174627 11.0332617 -0.3373387 10.1634162 NA 9.9146484 11.3738111 7.0376139 9.9709133 6.6569282 8.9833750 10.2272002 7.6653892 10.0354394 9.2873698 10.8287374 8.1504145 5.3904957 9.7393899 12.2235042 14.6230515 10.1584293 9.9299463 10.8628599 5.4174610 10.9284794 NA 0.2475630 8.1939560 12.1531746 12.7218292 5.7178573 14.2725322 11.9755991 10.1091407 5.6849421 3.3630168 5.0024235 8.1096578 7.6710032 9.1594281 11.8232336 NA 10.5585282 10.7430588 1.4699381 9.2994436 9.9890039 8.4907109 4.4954649 NA 13.0411700 10.4658983 1.9845164 9.1494093 0.2475630 5.0024235 10.3131774 10.5683374 9.3699334 11.1501632 10.4069877 10.5029589 0.2475630 11.0135135 10.7811910 5.2624858 8.2662009 7.2209954 10.4074082 14.7910118 8.6319751 11.0714347 11.7686465 9.3612791 3.1861360 4.2772855 9.9473985 10.2219514 11.0685136 NA 3.7069725 7.5543578 7.9617825 10.9895655 7.8374999 5.9845028 4.9479747 10.8799263 11.9839388 4.0201288 12.9092407 5.4040414 7.1743265 11.3316809 13.6516583 13.3228488 7.5573925 11.0503225 11.3926198 10.8106282 11.0780520 4.8720259 8.5390913 12.6003160 9.2991989 NA 10.5127612 9.0516679 3.0548832 3.5699406 10.1055178 11.5129566 10.8113687 9.7905686 14.7984639 11.0346232 9.0278032 7.1782744 NA 13.5891483 7.5664560 12.5811581 12.5215266 8.1900513 9.0462785 8.5977394 11.2374706 -0.1715000 1.2582000 1.7302000 -0.0292250 1.4363000 -0.3553700 0.2841600 -0.2670100 0.2195400 -0.0587810 -0.0587810 1.0497000 1.2852000 -0.4226900 -0.4414900 1.9019000 0.4165700 0.5889400 0.1430500 0.2371500 -0.0363160 -0.0582420 -0.5079800 3.3430000 0.4752300 0.9509200 0.2055900 0.1022900 1.0803000 -0.4865300 -0.1715000 -0.5698500 -0.4343500 0.3053100 -0.4506500 -0.4267300 -0.4182000 0.5365400 0.2195400 -0.6049100 0.4453900 -0.4870500 -0.9020100 0.2298100 -0.4556900 -0.4462900 0.6312800 -0.4055500 -0.4938500 -0.4596400 0.0808360 0.6418800 0.1031700 0.0664040 0.3448000 -0.4378200 -0.4661400 -0.4684800 -0.5079800 -1.2929000 0.1833800 -0.5728200 0.0897970 -0.5177800 -0.0014369 0.3389500 -0.082 -0.423 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.121 0.183 0.183 0.206 0.102 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 -0.434 -0.434 -0.384 -0.384 0.284 -0.396 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 -0.082 -0.423 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.121 0.183 0.183 0.206 0.102 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 -0.434 -0.434 -0.384 -0.384 0.284 -0.396 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 7.4439340 12.9116137 4.3064300 8.3785363 4.6849421 10.5687133 0.2475630 3.1220100 7.6283588 9.5111972 NA 7.2613343 8.5844154 10.9125766 10.1148156 3.5205605 5.3350008 10.5259863 8.5064952 9.7205661 9.7076856 7.9754571 10.4594252 -0.4344028 7.8499261 10.5029589 1.9845164 NA 11.2031867 3.1861360 12.4340638 12.4738487 8.2624872 10.6765948 7.0548919 9.8622466 6.2248159 1.4699381 -1.3375210 1.4699381 9.2305304 9.0343511 9.6233003 -1.3375210 11.4205476 7.0548919 9.6842484 7.1584289 10.1777814 0.2475630 10.9372437 3.4174610 6.5205558 9.1056629 5.7940207 6.2772837 7.9128726 6.8375005 7.3100329 11.2680538 13.5681964 NA 11.2226683 NA 9.7899239 3.3064372 8.5375558 8.3082330 13.835705 7.891393 8.563441 14.272532 10.507280 12.327688 11.823234 9.300105 9.778918 11.133487 13.373704 10.950287 10.221951 8.990127 1.247563 8.849926 11.840617 11.9287752 5.7606069 8.4891230 8.8756784 7.6681986 10.4835750 5.6849421 5.3904957 10.1584293 3.9105024 NA 9.0709039 8.1923757 12.6120363 11.2456571 8.2955697 8.5143235 9.4970455 6.3349990 9.3699334 9.4787581 10.7209044 11.2130806 11.5423490 9.9287752 -0.3373387 9.6759599 6.6409419 7.1624205 10.9895655 6.3064300 10.6600255 10.8799263 8.3113274 13.3935220 9.8337511 10.2338530 12.9100569 10.8793202 10.1039623 0.6625701 TCGA-C8-A12M 70 0 NA 358 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 3 1 1 NA 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.318231e-06 3.469029e-07 11.7319554 4.5933119 7.6328426 11.1961983 NA 10.6594031 1.6864333 10.5598674 12.0641760 5.9088153 10.9351415 9.1238286 9.4245155 9.6656102 9.4579127 6.6483547 11.7145596 9.8630120 6.4413108 2.1014484 11.4360134 8.1756024 14.1712042 11.2008086 9.4143438 11.1032208 6.1014610 10.3505743 2.5608861 1.1014484 7.5812413 12.0459898 14.0068478 9.0128527 13.6069002 13.3612776 7.4634042 4.2713883 1.4233630 4.1889231 8.3659033 9.4301358 7.9216398 14.0525633 2.4233899 8.3682471 14.6965725 NA 9.3284389 11.7101776 3.9594456 7.6788895 0.6864333 13.1090041 8.1594526 3.8563483 7.9687394 1.1014484 6.2912849 10.2204018 9.7389914 10.2531117 8.9184444 10.0643568 9.2021231 1.6864333 12.1360878 9.7471192 6.0556577 5.7879600 0.1015156 11.0336755 13.9253255 8.8740887 11.6418310 11.6670389 7.3588490 1.9088129 8.2688788 6.3588481 9.7023029 9.5973157 NA 5.7879600 7.3350803 10.8970946 11.0180867 3.6864221 4.7738856 3.2713809 9.8036334 12.4154775 4.0083524 13.3705144 4.5933119 8.5381722 12.2798144 8.4323778 13.1193131 7.3060316 10.4362927 11.2294551 11.2851892 11.3160834 5.3493865 7.9438112 11.9926749 13.9322730 NA 9.5629401 10.3440394 0.1015156 3.2721875 9.4132090 11.4775862 11.5251019 9.2524774 13.6761725 12.2952941 11.6791256 8.7289946 NA 15.3858330 3.9088129 10.5908070 9.8462946 10.5797248 9.1809455 8.7614568 11.5080352 -0.0686630 3.0159000 -0.7271200 0.1007400 0.1007400 0.0000000 0.0869560 -0.0438730 -0.3790900 3.6569000 2.0516000 2.0488000 0.0513870 -0.3256500 -0.3356000 3.0340000 -0.7396700 0.0291840 2.6777000 0.3572400 0.9618500 0.0322810 0.0813220 1.1182000 3.6569000 -0.2856000 -0.2856000 -0.2856000 0.3947900 -0.0686630 -0.0686630 -0.0875790 0.1007400 0.0000000 0.0000000 -0.7834500 0.2396900 -0.0291750 -0.3790900 -0.3790900 0.0286220 0.7226300 -1.1861000 -0.0126860 -0.7324000 0.3060100 0.3060100 -0.3256500 -0.3256500 -0.3356000 -0.7396700 0.0291840 0.0276380 0.8848600 -0.7418500 -0.2876200 0.0135870 0.0685220 0.0813220 -0.2732000 0.3417700 -0.2856000 -0.2856000 -0.7307300 -0.0030475 -0.6998300 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 8.078741 11.873982 3.008343 8.736272 4.625025 11.908010 1.423363 NA 8.450189 8.459013 NA 6.879012 3.625025 10.386863 9.077309 NA 5.716171 9.790585 6.640619 11.308475 9.622384 8.246119 11.558585 1.686433 10.423389 9.202123 1.101448 NA 9.924032 4.008352 11.630647 12.028127 8.228165 10.412074 6.915242 8.784455 7.918445 3.271381 NA 2.686433 8.463405 7.686423 10.239092 2.101448 10.535953 7.396082 10.368247 5.593315 9.602303 NA 9.755202 3.008343 5.560892 9.651351 6.923108 6.020324 8.041040 8.035152 8.008351 NA 14.109189 2.560886 10.794512 NA 6.220402 4.716173 8.463405 5.787960 15.6527396 5.2713846 8.9327681 13.6069002 10.6444925 8.7844552 14.0525633 15.6244713 8.0929828 11.1685589 14.1402512 11.7267130 9.7023029 7.3960815 -0.8986189 10.3157798 11.9072046 11.3212343 7.8860959 8.5670271 9.3740905 8.3705876 11.3142884 5.0787422 9.8019005 11.2008086 5.7879600 NA 4.3109145 7.6915237 10.1594525 10.5511253 7.9902038 8.2863360 10.3176003 6.7667966 10.2531117 10.2378111 11.3505742 9.4969949 10.8212774 9.3048088 -0.8986189 8.3931150 7.7453167 7.0614630 11.0180867 8.3109140 11.1981759 9.8036334 7.5023402 14.1989991 10.0128527 9.4927044 12.5599956 9.7800609 10.3254624 0.1015156 TCGA-C8-A12N 58 0 NA 358 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 5 5 2 NA 3 2 1 1 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.946798e-07 10.9228433 3.8986727 7.9156356 10.8607132 -0.3107903 10.5066071 NA 9.5998664 11.2191422 11.8308518 9.8338818 7.5565022 8.5094025 9.3774739 7.3474353 9.5810073 9.6051030 9.7733677 7.5221138 0.2741722 11.0332421 10.0088958 12.4994940 10.4644224 9.3554476 10.2356359 4.1810787 9.9192441 NA 3.9371466 7.9861401 10.7546398 12.6727517 7.4836393 11.9424802 12.3597693 9.8010113 6.6021124 2.5961241 6.9276286 8.5030048 9.1649572 8.4273158 12.8852109 3.0111557 10.7236788 13.8750670 4.3896632 10.2707303 10.7756917 7.2438128 6.1649572 -0.3107903 13.6884433 9.9624365 1.6892097 7.1527483 NA 3.6892209 9.2524199 9.9682538 10.7349833 12.0544525 9.6764876 9.9089972 0.2741722 10.6990523 9.5401918 7.4507749 7.7336180 8.7499197 11.7463692 14.6822505 7.4684505 11.1833292 10.7559856 10.0094601 1.6892097 4.1486576 8.2029515 8.8042672 11.6229143 1.6892097 6.0201399 7.0246144 10.2476444 11.3178970 8.9192441 6.6199617 5.0111512 10.2661803 11.7692084 1.0111378 13.3431323 7.3651807 7.1930492 12.1319080 13.8092995 12.5915988 8.0290735 10.3025527 11.0571843 10.3595656 10.7267706 3.8986727 9.1091837 12.4760038 10.4205427 -1.3107903 10.5557299 9.3158454 -0.3107903 3.4970886 9.5315741 11.3454250 10.0066363 9.1830790 15.1149642 9.8003593 10.2798107 9.7626958 3.1486576 15.8438934 8.4689429 13.0495221 11.6775533 9.7793361 9.6177420 8.0066363 9.5542145 -0.00170690 -0.00170690 -0.00170690 -0.00629910 -0.00629910 -0.00830050 0.00958830 -0.00650500 -0.00650500 -0.74803000 -0.74803000 1.38420000 0.00680440 0.00680440 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 -0.00318590 0.00208740 0.01558700 0.01838300 0.01838300 0.01838300 0.02454800 0.02454800 0.02454800 0.01237600 0.02511000 -0.00170690 -0.00470790 -0.00629910 -0.00830050 -0.00830050 -0.00678130 -0.00678130 -0.00650500 -0.00650500 -0.00650500 -0.00063801 0.00083195 -0.74803000 0.00666530 0.00666530 0.00666530 0.00666530 0.00680440 0.01377200 0.00000000 0.00000000 0.00041593 0.00041593 0.00041593 -0.00318590 0.00208740 0.01558700 -0.73221000 0.01838300 0.01838300 -0.00683310 0.02454800 0.02454800 0.01237600 0.00819590 -0.03885000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 9.1091837 14.0758945 5.6199617 10.0863634 1.4290535 10.3647397 0.6892097 NA 8.2127857 9.5588175 NA 7.5076139 2.8591546 10.5157722 9.1537694 0.6892097 7.2590794 8.8326068 7.9676730 10.2642901 9.2672188 7.1730395 11.0758945 3.0140339 8.8815166 9.9089972 3.1486576 NA 10.5893357 2.9371560 13.5611770 12.2567044 8.5503104 10.3020921 10.1481429 9.4086125 6.0111512 1.0111378 NA 7.2928498 9.2788748 10.1017935 9.8572690 1.0111378 8.0482264 7.1568294 10.4478633 6.5284275 9.4120312 NA 10.3892298 4.2438138 4.7553149 9.8854016 6.4394287 1.8591347 8.9907198 7.0599112 4.7977497 0.6892097 14.2841022 0.6892097 9.8925717 -1.3107903 9.2581297 4.9746257 8.1588656 8.5840414 13.010598 4.389663 8.865397 11.942480 10.383233 10.357222 12.885211 12.180576 9.315845 10.305313 12.635399 9.344754 8.804267 9.369583 -1.310790 7.717129 10.817862 11.1107626 7.1280160 9.1070761 9.2206052 7.6199610 10.3294685 6.7226464 7.4771260 10.4644224 7.9132251 5.1970201 6.0467748 6.9131288 11.6271491 10.1679932 9.3697326 8.8313307 9.8268553 4.2127872 10.7349833 10.9014160 11.0260091 9.4154418 10.3062318 8.7032440 -0.3107903 9.2170133 7.7029089 2.5961241 11.3178970 8.5703377 10.9255369 10.2661803 6.3185808 14.0812056 10.4432760 10.6214384 12.7837137 10.4933546 9.6586101 1.0111378 TCGA-C8-A12O 50 0 NA 385 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 1 3 1 NA 1 4 1 2 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.396621e-07 1.112456e-07 12.48123559 6.63219841 6.43288927 10.93066683 0.50812436 10.05545300 -1.49207854 10.20981607 11.44692081 9.96340361 9.93591302 7.60347354 8.68798553 9.75303469 5.34096810 9.34333720 9.38765958 10.10519785 8.14470106 1.67798173 9.57214540 10.35669933 13.59213731 10.65496319 9.41571811 10.58154850 6.05497000 10.00692562 0.09301923 0.50812436 9.17961754 11.99214400 12.13230066 8.72845456 12.34452128 12.45214784 10.27791421 4.95101888 2.67800428 6.85237220 8.55656315 8.50101471 8.34254763 12.23642209 4.67799864 9.82661919 11.69836405 5.42693897 9.31017264 11.39948035 7.77017096 5.10798910 -1.49207854 14.15514687 8.69047087 2.83001188 8.22060324 NA 5.32825485 10.13469802 10.69604695 9.31382018 9.43659475 9.71264754 10.28943612 0.09301923 11.72784993 9.64121852 4.46227486 7.64250303 0.09301923 9.64634810 15.77849946 7.36820087 11.44213574 11.66289446 8.58221802 2.31542132 2.41497438 8.31059279 9.23173743 10.51159425 -1.49207854 6.78420034 7.69047087 9.75541055 11.74483804 6.23599697 7.47962023 5.18050197 9.75005960 11.36819339 -0.49187564 14.02509980 5.01587218 6.96340361 12.94205294 13.86858057 12.64378565 7.76781963 10.07460618 10.87193734 10.46792981 11.16226487 4.99992786 8.49959838 12.02118709 11.60676649 0.50812436 10.67486710 9.25878342 0.09301923 1.80525118 10.12232613 10.38190499 9.95101991 9.41271104 15.53095346 10.44508232 10.97975157 7.03945757 3.46227486 15.86376298 6.83000427 12.54106912 11.34885427 9.65845840 9.06458246 8.71142435 9.62118045 -0.0274430 0.1645500 0.2433200 0.3022900 -0.0618680 0.8381800 1.1711000 -0.2380400 -0.2378100 1.8775000 1.8775000 1.3326000 0.2672100 0.2727900 0.2928900 3.6569000 -0.0062740 0.3384700 1.5927000 -0.2736000 0.1808100 0.2439900 -0.3501100 0.2513100 0.2513100 -0.0901400 -0.0901400 -0.0901400 0.4128200 -0.1016500 -0.0274430 -0.0358580 0.3022900 -0.0675120 -0.2471900 -0.5785500 0.0195970 -0.2380400 -0.2378100 -0.2684000 0.0667470 0.0768070 -0.3151000 -0.3022000 -0.3022000 -0.3022000 -0.3022000 0.2727900 -0.3711300 0.2497500 -0.0072343 0.3384700 0.2390200 0.2390200 -0.2736000 0.1576600 0.2439900 -0.0424780 -0.3501100 0.2513100 -0.0479810 -0.0901400 -0.0901400 0.4167500 -0.3911100 0.6615500 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.350 -0.099 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.350 -0.099 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 9.11725504 13.97867170 5.70774840 9.71935630 4.04847162 9.62766593 -0.49187564 -1.49207854 8.31220727 7.78187178 -1.49207854 8.69760460 4.91746517 10.33700623 9.07413049 2.20851726 7.95928736 9.69419054 8.07603259 10.33938361 9.34512089 7.07793192 11.14379447 4.12278866 10.93852891 10.28943612 8.59951158 NA 10.84792638 0.83001188 12.59255262 12.45086575 8.29434597 9.62766593 9.03163835 9.22146290 6.35356678 1.83001188 -0.49187564 2.31542132 8.14651216 8.72239566 9.33223956 3.59553946 7.84547500 7.88528699 9.72118055 7.75125013 9.90895578 1.50807364 9.73207803 4.15193186 4.09303614 9.52574082 8.01051020 6.12278659 9.23088387 7.83000427 9.08833482 1.96750065 13.60310245 0.09301923 10.65941014 -0.49187564 9.17341231 5.06266573 8.29271136 8.73689504 15.1047846 6.2223216 9.8288768 12.3445213 9.5722330 10.9217043 12.2364221 12.7383220 8.9705788 11.2334426 12.6953511 11.0291860 9.2317374 8.6074243 0.8300119 7.9238183 11.5679278 10.7654642 6.6373596 9.1725238 8.9046813 9.5394330 9.4266489 7.4910698 8.7332838 10.6549632 7.1840333 3.9675099 4.6165988 8.0418929 12.8976405 9.9211754 9.2373486 8.1465122 11.1505794 7.3346246 9.3138202 10.3346248 11.0009310 9.7089750 10.2317373 9.2154354 0.5081244 9.1732614 7.3122077 7.1910711 11.7448380 8.9939056 9.4021361 9.7500596 7.0277125 13.5979820 10.2754333 10.0760325 12.8105011 10.0291860 8.9756821 1.9675006 TCGA-C8-A12P 55 0 NA 358 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 6 3 4 NA 1 3 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.975819e-06 9.17776e-07 12.4994971 2.6120930 3.4700683 10.6281979 0.6121166 10.3280480 NA 10.1228502 11.0357273 8.7008742 9.7041826 7.5575296 9.4362493 12.1063166 4.5189757 8.8940162 9.6592100 9.7573813 8.0278281 2.0715224 9.4218542 12.2055939 13.7266825 9.3653028 9.1169051 10.2050102 5.6344539 10.1139233 -0.3879778 -1.3879778 9.4497141 11.7508379 12.0400536 7.8528771 15.7259605 12.4714267 9.6302862 3.3125200 NA 5.6995489 8.1970486 6.6177114 7.2487103 11.8330689 -1.3879778 11.4192397 7.3636302 7.0715181 10.3378783 10.3073143 8.5324389 5.4824514 2.6120930 13.8413368 8.5720882 2.1970476 8.3901634 NA 5.4947292 9.9118665 11.1439548 9.2880431 10.1376069 9.6254088 9.8475020 NA 11.1109353 10.0913611 3.8974921 7.1857328 NA 8.0756107 15.6098389 7.1794334 11.0140322 10.5320667 8.3619556 2.6120930 1.9340258 5.6781762 9.9563820 12.2018542 -1.3879778 6.4638349 7.6344539 9.4723972 11.0246559 5.8600143 5.9784084 5.3400067 8.7807582 11.5588096 3.3125200 13.3755060 5.1198790 6.6619348 11.4224569 15.5993501 12.6084713 7.0383506 10.8261015 9.9860387 9.4661752 10.8922769 4.7820101 8.9936291 12.3566046 8.6427532 -1.3879778 10.3241831 9.3543955 2.0715224 1.3169567 9.8870465 10.9511009 9.8694739 8.8019107 15.6926226 9.5943666 9.5582613 5.7206095 2.6120930 12.5059564 8.2933245 12.8523557 10.4105579 10.0435837 9.6071465 8.1932868 9.9419665 0.214920 1.460700 0.413660 -0.155720 1.380800 -0.130240 0.352270 0.865440 -0.131790 0.258330 -0.636080 3.656900 0.248490 -0.081224 -0.173280 0.551160 0.551160 0.126760 0.000000 -0.204040 2.446800 -0.210750 -0.286490 3.656900 3.119000 -0.031010 -0.031010 -0.300920 0.191100 -0.224590 0.214920 -0.196050 -0.155720 -0.564600 -0.140830 0.352270 0.352270 0.659500 -0.513260 -0.158150 0.487510 0.302590 -0.599780 -0.221140 -0.221140 -0.167450 -0.185170 -0.081224 -0.081224 -0.232080 0.144220 0.000000 -0.225690 0.131920 -0.552210 0.194470 -0.197930 -0.269160 -0.286490 -0.315340 -0.542540 -0.031010 -0.264010 0.152410 0.177620 0.129560 0.223 0.223 -0.176 -0.032 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 -0.151 0.263 0.152 0.152 0.894 0.120 0.232 0.232 0.000 0.000 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.000 -0.600 -0.160 -0.167 -0.167 0.000 0.223 0.223 -0.176 -0.032 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 -0.151 0.263 0.152 0.152 0.894 0.120 0.232 0.232 0.000 0.000 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.000 -0.600 -0.160 -0.167 -0.167 0.000 8.3314750 13.6765762 4.3669726 8.9957903 3.2559388 11.4475444 0.1971105 1.7820311 8.9795009 8.5249753 NA 7.6703213 3.0715224 10.4032490 8.7232217 1.9340258 6.7769936 9.2092075 8.5472512 10.1781401 8.4276133 6.9608140 11.1805173 1.4194310 9.5076613 9.8475020 0.1971105 NA 10.3782009 0.1971105 12.5111597 12.4869714 7.9452413 8.4947292 9.3107907 9.6099712 6.5069034 2.6995516 -0.3879778 -0.3879778 9.2595446 9.4947292 10.6785117 0.9340258 9.2279824 8.5619126 9.4575760 6.0959012 9.0827449 NA 11.5915113 3.2559388 3.1356498 8.9608586 7.6190571 6.3400067 9.4178299 8.4716208 8.1512449 9.0446280 13.3440414 -0.3879778 10.7041825 -1.3879778 9.3602789 4.5893680 9.6156041 8.6134945 11.6495816 8.3073142 8.3552374 15.7259605 9.6680462 11.7147180 11.8330689 10.0565834 10.0918663 10.6152526 13.6929036 10.7378224 9.9563820 9.1599445 -0.3879778 9.5008293 10.6905705 10.9164374 4.8019088 8.8300439 9.4354534 8.5383822 10.1144007 6.5368984 4.1666753 9.3653028 8.8433071 0.9340258 9.2101385 7.2340644 12.4105579 10.1970486 7.4097473 8.8492959 9.1502751 6.6995489 9.2880431 11.1490617 10.8951745 9.8372935 10.8099171 9.3819240 NA 10.1678879 7.8186851 7.3400067 11.0246559 8.4962566 10.1405402 8.7807582 7.7232220 13.3694240 10.7222431 10.9404805 11.8019106 10.7202838 9.0022550 2.3125200 TCGA-C8-A12Q 78 1 385 2 breast stage iiia t1 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 6 3 1 NA 1 5 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.497701e-06 6.244252e-07 12.2217309 7.2130488 8.2948656 10.0693269 1.0632958 10.0584629 1.8409264 10.3314258 11.7048372 6.3852291 9.5733592 8.1866838 8.7508021 10.0832893 7.1896368 9.6848301 10.6134986 10.2587616 7.4556190 2.8409063 9.9529140 10.4167634 14.2717101 9.7804883 8.9363061 10.7493017 5.2671725 11.0779158 NA -0.1590736 9.1695841 12.4520876 12.1072076 7.3300878 17.2356285 12.4394269 9.0454801 4.3003434 -0.7439555 5.7397617 8.3125844 6.3327616 7.6884888 12.1155784 -0.2129019 10.1647145 11.1944235 7.6331573 9.1035050 10.8588773 7.1263111 7.5980212 -0.7439555 14.5170776 8.0568463 1.7153663 7.3354314 -0.7439555 5.4056929 9.8998028 11.3667561 8.9511748 11.4311842 11.0880454 10.0434410 0.8409264 12.2033095 9.7452928 6.1984608 9.1115937 2.7795119 10.1822426 15.1527874 7.3153181 11.0237172 10.7728777 7.3247251 1.2559237 4.7316775 7.7235524 9.9221706 11.2694437 NA 6.4107651 7.7030301 8.7286375 11.3083448 5.8258034 7.0600777 5.6046733 10.9910795 11.8299487 1.2559237 13.1716392 5.7637409 6.3696881 12.0853720 13.2453854 12.9997817 6.8521362 10.7112738 10.8572531 10.2607604 11.4052174 5.1628384 8.6978534 12.2827293 10.0705290 1.8409264 11.0973144 9.5699632 4.4847633 2.5091891 10.1740644 10.6331571 10.1903746 9.9123714 14.8931658 10.2619219 10.1274668 8.9641684 2.8997943 14.2687020 9.5648545 12.5615096 12.0034053 8.5665595 9.6019061 8.1881615 9.7270629 0.01251600 3.65690000 -0.00705760 0.47718000 0.44528000 -0.00816240 0.68980000 0.45837000 3.03990000 0.00416320 -0.01450300 0.00866750 0.49926000 0.02960600 -0.46014000 2.64220000 1.43020000 0.01530800 -0.03502100 -0.00940460 0.01335300 0.00917050 -0.46323000 3.65690000 0.25996000 0.55974000 -0.46195000 -0.00981850 0.50933000 0.04287400 0.01251600 0.01349200 -0.48187000 0.01265500 -0.00512270 -0.00027724 -0.00857660 0.45837000 -0.47003000 -0.48565000 0.46776000 0.53169000 -0.46940000 -0.45018000 -0.44674000 0.00055459 0.00263570 0.00180300 0.46092000 -0.47564000 -0.47416000 -0.03502100 -0.03502100 0.01098200 -0.00940460 0.01335300 0.01195800 0.02763800 -0.46323000 -0.46376000 -0.18986000 -0.50214000 -0.46195000 0.30134000 -0.46089000 0.03750000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 8.7337048 13.6300691 5.9141579 9.3631636 3.7294114 11.1209065 2.2559539 0.5778276 8.3657774 7.5778744 -1.7441972 8.0826382 4.4653999 10.9177247 9.5574428 1.5778759 8.7235521 9.4865676 11.2172154 10.1944235 10.0827691 8.3500242 11.1293907 3.3434078 7.1416433 10.0434410 3.5413538 NA 11.2527731 2.2559539 11.7125577 13.0134408 8.3500242 10.6592249 8.7286375 8.5109750 4.1628384 2.3434078 -0.1590736 1.4258889 8.4823586 8.6493370 10.8747909 4.0888370 12.2600678 7.4605173 9.3440722 7.3247251 9.7518016 NA 10.9393798 3.4258755 4.1385933 9.9488715 6.3200423 5.8925707 8.4580703 8.6057806 7.0307333 1.9563913 13.0153147 1.8409264 10.7738619 -1.7441972 7.4457714 5.3434078 9.2566507 9.8516702 13.089544 6.174810 9.495545 17.235629 10.779509 10.550854 12.115578 9.350684 10.298926 10.954217 14.688391 9.168087 9.922171 8.123225 2.343408 8.798978 11.409815 11.372778 6.711273 9.075327 8.710246 8.344735 10.292968 7.104569 5.374886 9.780488 5.977046 8.598021 7.275537 7.635563 11.198828 10.305114 7.579744 8.035666 10.356609 6.043850 8.951175 10.005816 10.564570 10.397734 10.727876 8.895287 1.425889 9.315669 8.612035 6.626633 11.308345 7.899803 11.423678 10.991079 7.781467 13.147018 10.094363 9.579001 12.238049 10.143929 9.508021 2.063296 TCGA-C8-A12T NA 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 asian not hispanic or latino 85.58.0 1 3 1 NA 3 2 1 2 1 1 1 1 0 0 0 0 7 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 3.954693e-06 9.019475e-07 12.4488367 1.6374711 6.8580133 11.1001103 NA 9.3721716 -1.1697447 9.5816510 11.5953932 6.5443525 9.4594636 6.1247272 7.8908029 10.3818154 6.8357321 8.3398821 10.6530761 10.3928265 7.3418595 3.8301032 9.7777440 10.7770134 14.5024219 11.0880841 9.0720903 10.7169468 5.5849956 10.2621216 NA -0.1699070 8.0419953 10.4689954 12.6548670 8.1654975 15.3781463 12.1496381 9.5681994 7.8413341 5.3379002 7.0732815 7.9307693 6.7004716 8.1986135 12.6606223 NA 10.3595376 13.8038044 2.4150826 9.6029330 11.0821811 7.5025327 5.5443525 1.4150555 13.6365515 8.4592996 1.6374711 8.0224000 -0.1699070 3.3536620 9.3634368 9.7512041 9.8378351 11.3880494 9.7211313 10.2547982 3.2224182 10.4244317 9.9215424 6.5580273 5.5715737 11.3940183 10.4963310 15.9234937 6.9179938 11.2579437 9.9002280 8.0297792 2.0000361 5.2895394 7.4037543 8.4374375 11.0851356 NA 7.1201259 6.9645338 9.4558158 11.5937344 6.5783002 5.2730496 5.5166077 10.1904055 12.2525661 3.0000361 14.0824399 5.8413341 7.0589258 11.7497153 13.5160603 12.2067751 7.6470907 9.5512063 10.9545515 10.2748114 10.9115905 4.0757551 9.0359004 11.7004718 11.9747653 -1.1697447 10.3702351 9.8195015 NA 0.9577661 9.3507257 8.9937567 9.9638915 7.9412425 15.1424583 10.1390148 9.5799764 6.6566551 3.4150691 15.6911212 8.3575841 12.2743455 12.2233634 9.8009319 9.5426342 7.9307693 9.8569762 0.0189430 0.0189430 0.0189430 0.0024346 0.0087528 0.0256710 -0.0634100 -0.0162920 -0.0162920 0.6381000 0.6381000 1.3415000 -0.0145030 0.6562700 -0.0089906 0.6890600 0.6890600 0.0011093 0.0011093 -0.2716900 0.0054139 -0.0151910 -0.0278080 3.5420000 0.0000000 -0.3006300 -0.3006300 2.8249000 3.6569000 -0.0227440 0.0189430 -0.6630000 0.0087528 -0.0234290 0.0023581 0.0052749 0.0052749 -0.0162920 -0.0162920 -0.0162920 -0.2281000 -0.2451500 0.6381000 -0.3626100 -0.3626100 -0.3626100 -0.3626100 0.6562700 0.6081900 -0.0089906 -0.7279300 0.0011093 0.0011093 0.0011093 -0.2678100 0.0054139 -0.7474800 -0.7768500 -0.0278080 -0.6944100 -0.0008316 -0.3006300 -0.3006300 -0.0228810 0.0012481 -0.0385780 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 8.8921533 14.8362139 5.8413341 9.8914783 1.6374711 11.4042275 NA -0.1699070 8.5025323 10.1015701 NA 8.1632622 1.6374711 10.2920980 9.3279588 3.8301032 5.3379002 9.2288507 10.3546487 11.3548936 8.8715061 9.1744029 11.4445868 1.9226546 7.6406788 10.2547982 9.3229617 -1.1697447 11.3704773 2.2895394 14.2144524 12.7271016 8.1039025 9.7689515 8.4539887 9.7915567 4.4150691 1.6374711 0.8300930 -1.1697447 8.6163768 10.3043199 10.2730505 0.4151096 7.2390314 7.3731392 9.7226499 5.8301082 9.8635301 0.8300930 9.6748128 4.4739622 2.6374711 9.3900290 6.3966938 3.0780291 8.5715740 7.8413341 8.1270234 2.4150826 14.3392326 -1.1697447 11.1350288 NA 7.7872091 3.2895394 7.9360154 8.6502860 13.205866 5.772622 8.301782 15.378146 9.602422 10.610237 12.660622 11.517264 9.661723 10.385655 12.895860 10.554195 8.437437 10.206232 -0.169907 7.584995 11.303052 11.2416180 5.9798539 9.0444261 9.0827726 8.3497434 9.9906025 6.5095866 8.4037543 11.0880841 7.1520353 1.8300930 5.8853889 7.9468671 11.7213212 10.1424228 9.0945496 9.4411319 9.6366567 4.9175702 9.8378351 10.4658252 10.8914783 9.6486892 10.4328059 8.3179471 -0.1699070 8.9968601 6.4448161 4.9175702 11.5937344 8.7623219 9.9135864 10.1904055 7.2268399 14.6342381 10.9175699 9.6802939 11.9761984 11.6009774 8.9937567 0.4151096 TCGA-C8-A12U 46 0 NA 385 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 3 1 4 NA 1 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 1.946798e-07 11.8725085 1.1127668 7.6947402 11.1991884 NA 9.8386641 3.3144210 9.4490700 11.9713894 6.2502908 9.3473647 7.7126996 9.2327653 9.5672916 9.0576452 9.3154003 10.2554043 10.3828484 5.9806834 4.6488393 10.9036239 9.2410388 14.8533897 9.1538983 9.0304572 10.9682781 7.0003122 9.7296811 NA 2.3758179 6.9954302 12.4978941 12.7239037 5.0762598 12.0742364 12.8347403 7.9806834 6.3981896 2.1128002 3.7450544 8.2338023 10.8832854 10.6205814 12.6315382 1.3758457 9.2181714 13.9183291 NA 9.9162721 11.2402652 8.4982178 9.5672916 6.4703384 15.5269517 8.5272604 -1.2092280 7.4632840 -1.2092280 3.1127835 9.2946844 9.2034285 9.0611541 8.9670317 9.2181714 9.4009607 1.7908554 10.8829550 10.1960001 6.4773584 5.3907708 1.1127668 10.3607142 13.6354173 6.8321343 10.5957963 10.3246749 8.9342420 0.7908554 7.8407074 6.9757345 8.8461410 9.2234006 NA 4.5982163 8.2543829 9.0482465 10.4459421 4.7908606 6.8132258 4.7215969 9.5230259 12.2562975 7.5457460 13.8162145 6.2665917 7.9072025 11.0097245 12.3821472 12.5626575 7.3183358 9.7193770 11.0695985 10.1960001 10.7178958 4.1484135 8.8888906 11.7167839 9.1014715 NA 10.8090587 9.8166903 0.3758457 2.4924172 8.9966517 11.5767197 9.4852165 10.0675646 15.2755242 10.4646094 10.1500591 8.1810275 2.8783134 14.4894276 9.9726321 11.6873802 9.8488503 9.2837132 9.0232795 8.0482465 9.3893205 0.0143300 -0.4358300 0.2657900 0.5241500 0.6238800 -0.0235480 -0.4816500 -0.0047079 -0.3579500 -0.4574700 -0.4574700 1.4207000 0.0101460 -0.4411300 0.9322300 -0.4463100 -0.4463100 2.2137000 3.6569000 -0.4482500 0.4789000 0.0308730 -0.4337700 -0.4337700 3.0905000 0.0389130 -0.0794760 -0.2267500 0.4151300 0.0143300 0.0143300 0.9015000 -0.0808070 0.4331300 -0.5247100 0.0108420 0.0000000 0.0214630 -0.3579500 -0.4091100 0.0216030 -0.0015243 -0.4638100 -0.4682300 -0.4474500 0.3278500 0.3278500 -0.4411300 -0.4411300 -0.4294200 -0.4463100 -0.4344200 -0.4413500 -0.4413500 -0.4482500 0.0054139 -0.4611000 0.0016642 -0.4478200 -0.4337700 0.4520700 -0.3931900 -0.2267500 0.4151300 -0.8932700 -0.4448800 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 8.3550079 9.7837970 5.8020846 8.8569477 3.5457460 10.7428718 2.4912887 -1.2092280 8.8941463 5.9201408 NA 4.5982163 NA 11.2239224 9.3879800 4.0387873 6.8676741 9.6221659 9.3367884 12.0916401 10.7258395 7.3870480 9.7052438 0.7908554 8.2907045 9.4009607 1.5982223 NA 12.2700073 3.0387873 11.9763535 12.8411324 5.9507297 9.2986533 9.6142258 10.3706459 2.6977516 3.4347083 NA 9.5868981 8.4129102 8.3981887 10.5089633 1.3758457 10.4455080 7.7852118 10.4681378 7.4912984 11.3981889 NA 7.2338018 0.7908554 4.5722167 9.7709910 8.6609614 5.8993835 8.5204792 8.0364116 7.2420699 NA 13.1300127 -0.2090612 11.1234547 NA 8.0003122 2.5982223 8.1060080 8.3454474 10.897094 6.883616 9.698500 12.074236 9.753755 10.989917 12.631538 13.182841 8.702251 11.618400 11.827547 9.975734 8.846141 8.368287 1.598222 9.034033 11.233025 11.4197598 6.0762598 8.9557656 9.0646541 8.5474147 10.7928227 6.1484115 9.8948020 9.1538983 7.3338906 -1.2092280 6.5051033 8.6951319 7.6887042 10.6856763 8.4685784 9.5179282 8.2002493 6.4773584 9.0611541 10.9288104 10.5365329 8.6158172 10.8832854 8.4615151 -0.2090612 9.1456589 6.0576452 7.0148607 10.4459421 4.8352521 11.6443631 9.5230259 7.0148607 13.5230790 11.3798074 9.9917572 11.3776984 10.3986512 10.1105307 1.5982223 TCGA-C8-A12V 55 0 NA 385 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 asian not hispanic or latino 85.58.0 4 4 2 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 5.562279e-08 11.6958887 5.4922442 5.3982683 11.0426779 0.6978628 9.9814944 -0.3022262 9.4987272 11.4054021 9.1510977 9.1008392 8.4325369 9.1251401 9.9078896 8.6765375 9.9344394 7.9145729 10.0169347 8.3702524 9.0050280 11.0109937 10.3203366 12.3502241 10.0853061 9.6092192 10.4962990 9.2085914 10.0509741 6.1407705 1.0197731 9.5934025 12.2533750 12.8210595 6.6047178 10.6050934 10.0739526 10.5546418 7.3452855 3.8677482 6.2056212 9.2714745 11.6483831 8.1198920 5.6751074 NA 11.2881803 10.1314126 8.6621681 9.7078378 10.4038914 7.3488786 8.6520236 4.4257480 15.1941705 11.9947004 2.6047119 8.1916826 -0.3022262 6.7090549 9.3506723 9.3569312 9.2752560 10.4808254 9.2790278 10.6359365 2.6978183 10.6512962 10.3506722 4.0553779 8.3542520 1.5051796 6.4987264 14.7874018 7.1712489 11.0360065 10.1459435 11.8764920 2.6047119 NA 8.9314470 9.0912177 11.1881767 -1.3022262 1.8677384 7.8727531 10.7322823 10.1991668 5.5180063 9.0454487 5.6978266 10.4979182 11.8105925 3.7422218 13.0764607 2.9457575 6.3702532 10.7984895 11.2581600 12.8006231 6.4726145 10.6897033 10.2360161 10.0839214 11.4066956 4.4791853 8.2809099 12.4190332 9.3434856 -0.3022262 10.7094039 9.6137066 1.8677384 3.2839958 10.1193662 11.1610961 10.4853217 9.1407707 14.8709578 10.7319383 10.1177874 7.4560504 3.3982683 12.9629294 6.0287437 13.4134139 12.7223609 10.4316899 9.6263455 8.1715331 10.1150891 0.1587600 0.1587600 0.1587600 0.0012481 0.1688000 -0.0690550 -0.0083005 -0.0018014 -0.0018014 0.2331800 0.2331800 0.2331800 -0.0736100 -0.0018014 0.0072217 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0212350 0.0000000 -0.0760120 -0.0461770 -0.0461770 -0.0461770 0.1014700 0.1014700 0.1014700 -0.0854570 0.1587600 0.1587600 0.1132700 -0.0762060 -0.0690550 -0.0841190 -0.0083005 -0.0083005 -0.0018014 -0.0018014 -0.0897310 0.1260900 0.1260900 0.2331800 -0.0171160 -0.0171160 -0.0171160 -0.0171160 -0.0018014 -0.0018014 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0515860 -0.0368100 0.0000000 -0.0760120 0.0035880 -0.0461770 -0.0461770 0.0076548 0.1014700 0.1014700 0.2827900 -0.0745440 0.0709450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 10.4321134 13.1775443 NA 9.7111499 6.1390294 11.1277569 5.1735592 1.0197731 9.2046306 9.9981797 1.0197731 7.8750723 7.6836691 11.0890708 9.5378183 1.8677384 8.7048543 11.1029687 7.8999508 9.4172160 9.5499275 7.4460204 11.1436180 4.0197553 8.3631632 10.6359365 2.8677581 NA 10.9840961 2.6978183 12.7786447 13.1133709 8.9809156 9.7524315 11.7307339 9.5075953 4.0901421 4.4257480 NA 4.9266447 8.8802214 9.6815334 7.8399344 5.4791885 9.4093566 6.0016086 9.6039662 4.5558100 10.5405704 6.0465544 10.5831423 4.0197553 4.1896823 9.7642124 6.0445187 8.5511368 9.9872698 10.3000620 10.5456676 -1.3022262 13.1475562 3.6047237 10.2995980 -0.3022262 9.0520765 4.5804711 8.7544650 8.7517529 11.279329 8.457715 8.159307 10.605093 10.286542 9.942786 5.675107 9.121993 8.753110 10.643271 13.332185 11.545472 9.091218 7.452715 1.867738 7.625605 10.638508 10.692534 3.090142 8.958747 9.379066 7.189680 9.569717 9.495489 8.248574 10.085306 6.758523 2.282796 5.697827 8.920948 13.040805 11.408418 7.683669 7.766606 10.215004 9.852012 9.275256 10.916390 10.918810 10.341683 10.448953 8.305157 NA 9.765759 7.185065 10.083690 10.199167 7.890120 10.883431 10.497918 8.149038 14.195960 10.638508 10.418071 12.482258 11.314606 9.100839 5.072865 TCGA-C8-A12W 49 0 NA 385 breast stage iiib t4 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 3 3 1 NA 1 4 1 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.733988e-07 2.224912e-07 13.3998041 5.7650228 6.4024510 11.3878872 0.3727293 9.7707356 NA 10.0020611 11.8536629 6.9676505 9.4777399 6.5886412 8.6222129 10.2306854 6.0356701 8.7621564 10.3566481 9.8491131 6.7184794 -0.2122332 9.3661145 10.4816644 15.0911660 11.2024272 9.3689425 11.4120805 5.8430241 10.1079784 NA 2.5950978 8.7036212 11.4764294 12.0651398 7.8645576 13.1147331 12.7280556 10.2456358 5.4742413 3.4315962 7.8698911 8.3876546 7.8698911 8.3499844 12.3474775 -0.2122332 9.8936504 13.4891026 -0.2122332 10.2197514 11.4526336 6.5156620 7.9726174 3.9576639 13.2237130 11.5668457 3.1096782 10.0480735 1.7877250 6.4812295 9.1474914 10.8688925 9.6127006 10.2265338 9.1800593 10.4579556 1.3727293 11.3592576 10.2965272 5.3727049 7.3423307 6.4459534 9.6619550 16.0804500 7.4565557 12.5338363 11.7641271 8.5805322 2.9576732 2.4881808 7.5756444 9.2337913 10.2124332 -1.2122332 6.1186587 7.4601675 9.7813881 10.6316630 5.8645576 6.6581072 5.2634739 10.1578845 11.5015580 2.9576732 14.0030474 6.4951003 7.0915232 11.4515224 13.0738665 12.5212870 6.9272932 9.8396305 10.6569502 10.0070074 11.4636990 5.5019868 9.0069106 11.0521846 8.4724906 NA 10.3452056 10.3495073 1.3727293 3.3935947 9.9788011 11.2134824 9.9008330 9.7657373 15.0272100 10.4477379 10.4994089 6.9923130 5.2955357 16.4067583 8.6673252 11.7813880 10.9378066 10.0309159 9.2223701 8.2306853 10.3076436 -0.192240 0.386340 0.386340 0.236590 0.000000 0.151590 -0.495800 0.171810 -0.416300 1.856000 -0.524810 1.526200 0.333990 -0.241190 -0.170820 3.381500 -0.205730 1.268000 0.139870 -0.058462 0.450540 0.063223 0.354300 0.354300 0.354300 -0.358180 0.138350 0.138350 3.282800 -0.192240 -0.192240 -0.154920 0.178560 0.076928 0.022304 -0.465360 -0.041159 0.171810 -0.416300 -0.416300 0.097833 -0.154530 -0.501620 -0.201120 -0.201120 -0.201120 -0.208230 -0.241190 -0.297740 -0.170820 -0.131990 1.268000 0.094231 0.094231 -0.066078 -0.421450 0.063223 0.381550 0.346200 0.354300 -0.216270 -0.358180 0.138350 0.027638 -0.774730 0.485870 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.000 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.779 2.280 -0.201 -0.201 0.000 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.000 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.779 2.280 -0.201 -0.201 0.000 9.1040234 14.5398089 7.9576668 10.2119082 3.5852751 10.6285199 -1.2122332 0.3727293 8.3689425 6.7066051 NA 8.6734384 1.1096949 10.4093360 8.9763307 6.2055939 7.0545283 8.9971953 9.1017588 11.6420299 9.2460563 7.8375907 10.5983136 4.1800603 9.2181946 10.4579556 5.7066051 NA 11.2868404 2.5950978 12.0352245 11.9640710 6.9526492 9.2150549 8.0474849 10.1225739 5.9676505 1.1096949 0.3727293 8.6158786 9.1275920 10.0574531 8.1540642 1.7877250 7.4812287 7.8538310 10.6665592 7.4024519 9.8625524 NA 10.2040117 5.3575977 3.9576639 8.9871813 6.1208972 8.0427707 8.7243798 9.1960717 10.2553475 1.3727293 13.2994946 NA 11.3526059 NA 8.3556982 4.4881808 7.3113042 7.8910297 14.512106 5.658106 8.299495 13.114733 9.714779 10.481664 12.347478 12.456073 9.220284 11.976022 12.321802 10.255857 9.233791 8.837590 2.875210 7.924733 12.593587 11.1372997 6.9726168 8.3839319 9.1186587 10.1000577 10.6381281 7.2223699 9.5334164 11.2024272 7.7735837 -0.2122332 4.7419361 9.2144993 12.5263620 9.6650260 8.8923406 9.3537959 11.3105686 8.7243798 9.6127006 9.4070449 11.3611525 10.2700458 10.7845685 9.8877472 3.3727014 9.2390973 6.7302568 8.5442984 10.6316630 8.6379286 9.8031570 10.1578845 7.5854035 13.0331461 10.0783368 9.6441674 12.8409042 10.3750507 9.4288905 3.9971930 TCGA-C8-A12X 62 0 NA 385 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA mucinous carcinoma yes NA asian not hispanic or latino 85.58.0 3 1 5 NA 2 4 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.899646e-07 2.503025e-07 12.4430330 2.1098620 6.1396250 11.4400476 -0.4751339 9.6554856 NA 8.9843467 11.3172988 8.7752135 9.6885649 7.0795040 9.6282029 9.0167682 4.9843478 8.4106116 10.3937376 10.2477226 6.0484782 2.6948356 9.6822620 10.6438562 14.6913528 10.2587779 9.2253550 10.9193778 5.0167682 9.8479698 -0.4751339 NA 6.5249146 10.0147631 12.7731185 9.1955713 12.0337003 13.1159699 10.2955790 6.4556527 1.1098954 8.8103175 7.7823031 8.9719984 5.0484760 12.4714559 0.5248661 10.3991280 14.5930216 NA 10.2671404 10.6308236 8.1359401 8.6017307 4.4318035 16.1248304 8.6229472 0.5248661 9.4659626 NA 4.1687704 9.6847865 9.4674297 9.8264114 8.7196719 11.1136297 10.0057054 6.3704049 11.5963775 9.9553677 6.9761265 6.3193307 NA 10.8178119 14.5273786 7.0597241 11.5171454 10.5445059 6.9678591 NA 7.2460147 4.9511821 8.2460142 10.0386428 -0.4751339 5.2798018 7.3322702 9.9637070 10.1723735 6.8010396 4.4318035 3.9172312 10.0650431 11.2968172 3.5249162 13.6185803 6.6017307 6.4791109 8.5693092 10.2731080 11.8879548 9.1633510 11.3197371 11.1373229 10.9354354 10.7035800 4.2798056 8.9616268 11.0077231 9.0833357 NA 10.4182166 8.7846584 -0.4751339 1.8468343 9.5652049 10.9970982 9.7917016 8.7823031 15.6965044 10.5277301 10.1822336 7.0795040 8.1795514 15.9379149 6.0167682 10.8541508 10.1705736 9.8736433 9.3450941 7.1687714 10.1681490 -0.79285000 0.00861350 0.00861350 0.05765300 0.05765300 0.01237600 -0.00866380 0.38849000 -0.80136000 3.65690000 3.65690000 0.42553000 0.01084200 -0.00249380 0.00041593 0.00041593 0.00041593 0.04442100 0.04442100 -0.08226900 -0.79469000 -0.39697000 0.02104300 0.02104300 0.02104300 -0.04455100 -0.04455100 -0.04455100 -0.01161100 -0.00567570 -0.79285000 -0.37651000 0.05765300 0.00055459 0.01237600 -0.80319000 0.00986690 0.38849000 -0.80974000 -0.82415000 0.04372300 0.04372300 -0.78260000 -0.38957000 -0.38957000 -0.38817000 -0.39780000 -0.00249380 -0.01231700 0.00041593 0.00041593 0.04442100 0.03524200 0.03524200 -0.05185600 -0.79469000 -0.38392000 -0.01037000 0.02104300 0.02104300 0.08999600 -0.04455100 -0.04455100 -0.01161100 0.00000000 -0.01986300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 7.2253550 11.6363768 3.3322640 9.0227670 1.0856286 11.0727736 NA NA 8.9321829 6.6541978 NA 6.1098766 NA 10.3641189 9.2339990 -0.4751339 9.7135039 9.0167682 9.8114730 10.9564128 9.7507854 7.8423277 11.8004577 2.1098620 11.2600480 10.0057054 2.5249162 -0.4751339 10.7704678 4.8103197 12.6301689 13.0380258 7.2663818 10.2722689 10.1866932 9.4060291 0.5248661 1.1098954 NA 4.5693088 10.7153572 10.7746212 10.5333438 1.8468343 7.5693096 7.7728424 10.6682983 7.2663818 10.1946859 NA 10.5869613 -0.4751339 4.7728411 9.8900127 8.1250513 3.3322640 11.4276671 8.1506242 12.8241231 NA 13.1839076 1.5249162 11.5734020 NA 5.4556527 5.7917021 7.8332544 9.0909690 13.442287 6.332269 8.833254 12.033700 9.709791 10.499330 12.471456 11.618663 8.942768 10.702335 12.079504 9.612378 8.246014 7.596378 1.524916 7.273108 12.794480 10.460080 5.332271 8.154272 9.056297 9.006715 10.049359 4.984348 9.759733 10.258778 6.633440 4.225352 6.959543 9.826480 9.409086 9.672120 8.796378 9.870320 10.853029 4.524916 9.826411 10.130395 9.672120 9.050436 10.154272 8.519269 3.332264 9.419278 4.951182 4.332271 10.172374 5.502194 10.314449 10.065043 6.536143 12.335888 10.707309 10.231411 12.229899 10.544506 8.833254 2.694836 TCGA-C8-A12Y NA 0 NA 0 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 93.58.0 3 1 1 NA 2 1 1 1 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.224912e-07 10.9329417 3.8160364 6.6152868 10.8085035 NA 9.8561388 NA 8.5614644 10.7688641 7.8817044 9.5630454 6.8817038 7.2933585 8.6384674 8.1562363 9.4627194 9.3736323 9.4422473 6.1208910 NA 10.5748483 9.4411012 12.8214966 11.1335385 8.8918047 10.0074110 5.0015906 10.5490192 NA 0.7285736 6.1322972 10.7435246 13.0823644 6.9315141 12.7592989 12.6801626 10.9392457 7.8732325 4.4473941 7.1407909 7.8195686 8.0978083 7.7601604 13.2929223 NA 10.9132431 14.1252683 5.5359285 10.3250747 10.8501078 4.9380270 4.8018209 NA 14.2852853 8.8018234 1.1435893 6.9637908 NA 3.1436057 8.1322966 9.7788765 7.5337806 10.4431061 8.6244022 9.7615384 7.3034830 9.8414481 9.5423556 5.9573923 7.9953607 2.8984986 11.5339152 13.9905713 6.9043986 10.4867975 9.8976641 8.5865553 0.4655044 2.6671655 8.6324562 9.4445362 10.6528920 NA 5.0015906 7.1687513 9.5761536 11.3545875 6.7766067 4.0978046 4.4655370 8.8876048 11.9404626 3.3530692 12.9273774 7.4632840 6.9477433 11.6590653 12.7117461 12.1571962 9.2204274 10.3315824 10.9146886 9.9294729 10.3188495 1.4655566 9.0208961 12.8301671 10.5091141 -0.8564760 10.9824218 8.6009926 1.8440642 2.6160989 8.1464266 8.4045315 8.8535572 9.2580049 15.9317184 9.6745058 8.6612811 6.7020327 1.3135361 14.6361066 8.1756573 12.7910703 11.8691911 9.0300706 10.0353956 6.9445118 10.4258923 -0.01130200 1.13860000 1.19170000 0.00350250 1.89530000 0.01687900 0.01171300 0.00642090 0.00642090 -0.00453590 -0.00453590 -0.00453590 -0.00574300 0.01073700 0.00628190 3.60120000 3.65690000 -0.01790700 -0.00033835 -0.69692000 0.01520200 -0.35997000 -0.01832000 -0.01832000 0.00017232 -0.04858000 -0.04858000 0.99161000 0.61533000 -0.01130200 -0.01130200 -0.01157800 -0.70964000 -0.02069600 0.01506200 0.01171300 0.01171300 0.00642090 0.00642090 0.00000000 0.10734000 0.10661000 -0.72877000 -0.01199100 -0.01199100 -0.01199100 -0.01199100 -0.00204470 -0.00204470 0.00628190 -0.36054000 -0.01790700 -0.00033835 -0.00033835 -0.69692000 0.01520200 -0.18595000 -0.72161000 -0.72241000 -0.01832000 0.01548100 -0.04858000 -0.04858000 0.63943000 0.02000000 -0.70949000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.442 -0.688 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.139 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.442 -0.688 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.139 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 7.6294411 13.2126419 7.4542244 9.5000639 1.1435893 11.1869810 -1.8562148 NA 8.9645884 8.0185930 NA 6.9151014 5.0624758 11.2568657 8.8397099 3.6354642 5.1208910 9.0550039 6.8681262 12.1949907 9.0740240 7.7946634 10.3651990 1.9509536 7.4587618 9.7615384 5.5865546 NA 10.6178247 1.6030269 13.1245101 12.5225840 8.1988944 9.6494234 11.8325177 10.0418353 3.0505017 -1.8562148 NA 3.3135361 8.9859623 10.9729382 8.5099341 2.2310637 7.7091900 7.5077463 9.7711458 5.5444916 9.7388693 NA 9.8539879 -0.2714264 3.0978130 10.2683859 7.1695262 3.3915340 8.5186512 6.6394666 7.1548394 1.6030269 14.2519933 1.1435893 10.4703222 -0.8564760 9.0824562 4.8018209 7.8036074 7.6827706 14.715065 7.157632 8.629441 12.759299 9.548221 11.456637 13.292922 11.389907 11.442592 10.126249 13.013109 9.927838 9.444536 10.864925 2.143622 7.447392 10.716549 10.6561054 6.3034830 8.9404625 8.9693658 7.7453826 9.6741255 5.4473941 8.5582971 11.1335385 8.2429597 0.4655044 6.8336099 6.3731993 10.6902652 9.1770348 8.4576284 10.4281468 7.5614644 4.6982018 7.5337806 10.9428935 10.7697771 8.5792820 10.2615795 6.7435244 1.3135361 9.2971891 6.0802505 6.0262556 11.3545875 5.5530041 10.4995135 8.8876048 7.3603573 13.8061411 10.6004796 10.0985351 12.3131454 10.8612882 9.0542546 -0.2714264 TCGA-C8-A12Z 45 0 NA 0 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 asian not hispanic or latino 85.58.0 6 3 1 NA 1 5 2 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 9.733988e-07 2.224912e-07 11.72237197 3.97585943 6.23324577 10.12178979 -1.02414974 9.50333462 NA 10.48464277 11.63563061 7.05800688 9.95885123 6.74404131 8.57948415 10.22319180 4.85849828 10.02910484 10.32955587 9.81506142 6.25198224 0.56081276 8.42706892 10.99127268 13.52287265 10.43631355 9.32679686 10.62376574 2.14577526 9.80795651 NA 2.14577526 6.66235791 11.87351405 11.80934076 7.26126000 18.36629954 14.33495516 8.97585771 5.12560564 3.49942497 4.90659722 8.25430728 8.51888955 6.77027406 13.13051757 2.43528188 9.86688187 12.87152760 8.05800688 8.87494263 11.19532871 9.01614750 6.97585714 1.97585026 13.21440944 7.78642908 -1.02414974 8.37460134 NA 4.40212184 9.98778372 10.78321255 9.11796459 11.53308201 10.42345747 9.49155751 NA 11.17767529 9.40317056 5.57576915 7.68321711 12.82653286 9.82448052 15.07327258 6.76304235 10.66367070 11.18744184 6.73740825 0.56081276 3.29779303 8.51501656 8.86307831 12.42113121 -0.02414974 5.56081887 7.65885198 8.80240618 11.51550116 4.70377625 3.49942497 4.70377625 10.63272935 11.89899942 1.78320518 13.79783089 5.78321304 6.13572980 11.60202296 13.72373592 12.86792607 7.56831490 10.37833680 10.53092606 9.13320465 10.86155400 5.16568286 8.84159108 12.43054251 9.43118479 -1.02414974 10.10642815 9.54571320 2.14577526 1.97947664 10.11028402 11.15109533 10.36871172 9.24264418 15.24134451 9.40944313 10.03992674 6.98148166 NA 16.18818304 9.94811956 12.84795534 11.00583497 10.31347953 8.33999248 8.56457214 11.32205280 -0.6605900 1.6328000 1.3193000 0.2259200 0.0102850 -0.0121620 0.0781500 0.0084743 0.0084743 -0.7126500 -0.7126500 2.6861000 0.0549450 0.0319170 0.0216030 0.0216030 0.0366530 -0.0226060 1.3226000 0.0690950 0.0098669 0.0509610 -0.6432100 3.6569000 0.5438300 2.0682000 -0.5784400 -0.5693200 0.0642250 -0.5995400 -0.6605900 0.0235660 -0.0151870 -0.6834200 0.3792400 -0.0357650 -0.0357650 0.0084743 0.0084743 0.0084743 0.0144700 -0.6490300 -0.7126500 -0.0078863 -0.7104200 0.0126550 0.1389500 0.0319170 0.0393370 0.0216030 0.0185230 -0.0226060 -0.6497000 -0.4187100 -0.0028677 0.0098669 0.0509610 -0.6666100 -0.6432100 -0.6175800 -0.6598400 -0.5290000 -0.5693200 0.0642250 0.7192300 0.1311000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 7.55328677 13.09560937 4.18531156 9.86536165 2.97585026 11.73616179 0.97585026 NA 8.62511375 7.39792273 -0.02414974 7.75268571 3.43529522 10.78602755 8.96596173 1.78320518 6.18531156 9.62690943 10.30789421 9.32790109 8.57881609 6.97585714 10.15825206 0.40882053 7.34654476 9.49155751 1.29777836 NA 11.17981736 2.43528188 13.23036963 11.80518397 7.44753291 10.28760596 6.86460094 8.43733720 6.92422462 -1.02414974 NA 4.95313950 7.42706892 8.70887282 10.80359734 2.29777836 9.26220739 6.98708548 9.37246244 6.58318810 8.39581772 NA 10.29665815 1.97585026 2.97585026 9.71758578 7.48922982 4.18531156 9.22259834 6.04194602 6.63406901 1.78320518 14.99286176 -1.02414974 9.64474263 0.56081276 9.01751693 2.97585026 8.02298138 8.51307616 11.763899 6.020251 9.120516 18.366300 10.601055 11.370588 13.130518 9.763760 9.642969 11.042620 13.818012 10.519856 8.863078 9.383125 1.297778 7.978673 11.655118 11.5321242 5.7037790 8.6500501 8.7307452 8.4515911 10.7783458 4.0633217 7.3334094 10.4363135 5.5457120 1.9758503 8.4616869 6.7398670 12.0104847 10.3627978 8.2118718 8.8721901 10.8763471 4.6197123 9.1179646 10.3140369 11.3849834 10.3449097 11.2049769 10.0236632 0.9758503 9.5598524 8.2604040 4.6762956 11.5155012 7.4475329 10.5845745 10.6327293 7.4393821 13.5764094 9.8174220 10.6836481 13.5491498 9.9278708 9.5457132 0.9758503 TCGA-C8-A130 52 0 NA 95 breast stage iiia t3 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 6 3 4 NA 1 4 1 2 1 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6.118507e-07 3.059253e-07 11.5327496 5.7620671 6.5679819 11.9153635 NA 9.6376834 NA 8.9553439 11.6709753 8.3061004 9.4992862 7.1020429 9.2442487 10.5676206 7.3802740 8.8055449 9.7889304 9.5607497 7.9014052 0.1871343 10.8310157 10.5891057 12.7233258 9.7289016 9.4039055 10.4171799 6.2460527 10.5712129 -0.3978282 1.1871343 7.6816819 10.6635682 12.8784669 7.1296746 13.0757125 10.9644149 9.7366233 6.5150864 3.9241284 7.2991650 8.0575245 10.6338982 6.9286261 12.5251530 -0.3978282 10.7340540 12.4518953 7.9902140 10.2288187 11.2937225 6.8922161 6.4414005 0.6021718 12.9463889 8.4366208 4.4350885 7.5240378 NA 5.5563926 9.3267108 10.3339403 9.8073794 9.6141231 13.7680462 10.1178968 2.6896570 10.7090871 10.2608549 4.6245630 5.7821071 5.8501243 11.7295466 14.4806791 6.5074633 10.9867110 10.6335536 8.4398251 4.1257585 4.5794759 8.7957225 8.6816819 9.9875203 0.6021718 6.4725625 6.9375869 9.7944898 10.9880594 5.9150810 5.6465918 4.4601790 9.7061404 11.9389825 2.0616380 13.0720296 5.9945141 6.9945141 11.6860088 12.9234205 12.3009017 8.3267108 10.7774347 10.6127251 9.9337467 10.6655921 3.8876033 8.5894609 12.5306229 11.1913800 1.9241379 10.6144724 10.0895347 0.1871343 4.9948557 9.5188229 9.0492803 9.6183090 9.4476870 15.1636342 10.0316038 10.6311391 8.4063279 3.8116457 14.5595485 7.1139494 12.3870363 11.1855149 10.3190166 9.8554536 7.8018693 10.3308021 0.00055459 0.35452000 0.39479000 3.52030000 0.39347000 -0.01177600 0.38337000 0.35904000 3.65690000 -0.45136000 -0.49364000 3.65690000 0.28248000 0.45604000 -0.01464100 1.56380000 -0.03044400 1.83170000 1.24290000 -0.04455100 0.37627000 0.34291000 -0.46366000 0.67734000 0.67734000 0.85838000 0.25215000 0.91703000 0.36756000 -0.00069303 0.00055459 -0.29532000 -0.46241000 0.38006000 -0.00193990 -0.45168000 -0.45168000 0.35904000 -0.43170000 0.18268000 0.03031000 0.29326000 -0.04170200 -0.54705000 -0.41487000 -0.41487000 -0.47194000 0.45604000 0.54418000 -0.88843000 -0.08797700 0.34925000 -0.45800000 -0.08939100 -0.06678800 0.31900000 -0.81802000 -0.08956700 -0.11077000 0.67734000 -0.41157000 -0.55457000 0.25215000 -0.49944000 -0.84171000 -0.07921000 0.282 0.456 0.000 0.000 0.349 0.349 -0.430 0.319 0.000 -0.134 -0.432 0.153 0.264 0.000 0.000 0.224 0.224 0.000 0.394 0.368 0.368 0.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 -0.068 0.345 0.345 0.000 0.000 0.669 1.079 -0.415 -0.415 0.000 0.282 0.456 0.000 0.000 0.349 0.349 -0.430 0.319 0.000 -0.134 -0.432 0.153 0.264 0.000 0.000 0.224 0.224 0.000 0.394 0.368 0.368 0.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 -0.068 0.345 0.345 0.000 0.000 0.669 1.079 -0.415 -0.415 0.000 8.7198402 13.3762634 5.3436636 9.3736865 1.7721390 11.0839965 1.4095267 NA 8.5908815 8.2639752 1.1871343 8.3226979 7.4319196 11.7897038 10.0131783 6.0368242 6.7366238 9.2514533 9.1833977 10.9766932 9.3509686 7.7696151 12.1350399 1.1871343 8.5180764 10.1178968 7.2886972 NA 10.9317131 3.5563926 12.7519442 13.0076709 8.2424420 9.5915915 9.0242618 10.4671570 6.2315534 3.6021956 0.6021718 0.9240999 10.1075124 9.9514782 9.5366251 4.2746195 9.7695964 8.0595781 10.2732958 6.0779309 9.3309680 0.6021718 10.9311524 0.9240999 5.3164427 9.6883996 7.0461767 5.0616293 8.9059778 7.7366231 6.7211375 2.7721179 12.7816397 1.9241379 10.2406330 NA 7.8689836 6.0030760 8.1606177 7.7468556 12.227781 7.702859 8.997731 13.075713 9.515086 10.609575 12.525153 11.869423 8.908566 11.218746 12.532010 11.001742 8.681682 10.132603 3.460179 8.307829 10.474102 10.3436640 5.8406017 8.9275024 8.8841272 10.0497968 9.7914595 6.3026371 5.6465918 9.7289016 5.9772364 0.6021718 7.1020429 8.2737914 10.3309678 9.3819164 8.3769840 8.1040341 8.9772364 5.8116508 9.8073794 10.3982366 10.6949542 9.7633289 9.6709754 7.9442716 2.3026408 9.3819329 6.8067687 6.0860131 10.9880594 6.6190050 10.8419954 9.7061404 7.3232962 13.6649600 10.5912367 9.4327123 12.4018834 10.7455802 9.3394443 2.1871660 TCGA-C8-A131 82 0 NA 54 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 4 asian not hispanic or latino 85.58.0 4 3 4 NA 3 3 2 6 1 2 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.387612e-06 2.775223e-07 11.31249212 0.52977098 7.05332859 10.98097795 NA 10.11033949 NA 8.59406068 10.90806171 8.35419516 9.05593991 6.49939308 8.10215104 10.55444486 5.76498302 9.35100944 8.72452374 10.56731385 8.11222263 6.69969182 9.97063598 11.70073508 13.64188051 9.82438759 9.46444058 10.59406049 5.69969321 9.98577891 NA 3.40423556 7.43264462 10.95847594 11.76817159 7.94761941 12.02128594 11.06049829 11.42609924 4.87553927 -0.05514155 5.98919806 8.50704694 4.30235561 8.40628368 11.84585977 -1.05529145 13.69990056 10.34994585 2.64524051 9.54057463 11.34140913 7.54471720 7.13956158 3.19273074 14.55608251 10.13090617 2.64524051 8.18320908 -1.05529145 4.77769324 8.16155014 10.60524596 9.13462885 9.32958805 9.10593626 10.30125634 -1.05529145 10.29684774 9.51085830 2.26672658 6.83962205 10.54378730 8.77927548 15.08705104 6.30402726 10.67951397 10.22557511 9.09582080 1.75214913 5.05332859 9.29574345 8.33926702 11.52576949 -0.05514155 7.03756123 6.90480680 9.49939328 10.80666666 6.20219241 5.85169408 4.85169408 10.76218776 11.69404528 1.75214913 13.64453945 3.46836175 6.34568378 11.45976490 14.36018302 12.43477770 8.52976669 10.62120225 11.13432010 10.03046934 10.07730403 3.26672658 8.72616399 11.51987082 10.55305921 4.15425915 10.17722530 8.91778409 -1.05529145 3.53636379 9.50990640 11.58459723 9.80821626 9.02161991 15.38661381 9.11848146 10.00617556 7.42053798 NA 13.14554973 10.49651258 13.11785681 11.42811632 9.93206841 10.17181855 7.73270675 10.10177862 2.868200 0.487510 0.474700 -0.028218 -0.018490 0.052952 1.652300 0.043440 -0.122870 -0.473110 -0.473110 1.256900 0.612440 -0.027398 -0.024251 0.523980 -0.028628 -0.223420 -0.227240 0.164900 -0.023018 -0.028845 -0.214410 -0.214410 -0.214410 0.010564 0.010564 0.010564 0.202280 -0.023292 -0.202740 0.183890 -0.028218 0.052952 0.052952 -0.456080 -0.456080 0.043440 -0.122870 0.072396 0.394960 -0.032178 -0.473110 -0.162050 -0.162050 -0.169770 -0.158990 -0.027398 -0.027398 -0.024251 -0.028628 -0.223420 -0.227240 -0.227240 0.164900 -0.023018 -0.028620 0.199840 -0.214410 -0.214410 -0.062118 0.010564 0.010564 0.202280 0.390150 0.000000 0.612 0.000 0.000 0.000 -0.227 -0.227 0.165 0.000 0.000 0.210 0.210 -0.214 -0.214 0.000 0.000 0.000 0.000 -0.203 0.272 0.202 0.202 0.203 0.000 0.157 0.157 0.000 0.000 0.000 0.000 0.000 -0.456 0.000 0.000 0.395 0.000 -0.473 0.745 -0.170 -0.170 0.000 0.612 0.000 0.000 0.000 -0.227 -0.227 0.165 0.000 0.000 0.210 0.210 -0.214 -0.214 0.000 0.000 0.000 0.000 -0.203 0.272 0.202 0.202 0.203 0.000 0.157 0.157 0.000 0.000 0.000 0.000 0.000 -0.456 0.000 0.000 0.395 0.000 -0.473 0.745 -0.170 -0.170 0.000 7.75215917 13.83933793 3.80278258 9.01223874 1.38840999 12.50919204 0.94478350 3.80278258 8.66590364 9.59764923 NA 8.21498300 8.88291353 11.00550027 9.18916828 3.69969598 6.45259873 9.23597495 9.65647134 10.69760313 9.04865606 6.39601560 11.66376524 -1.05529145 8.51276061 10.30125634 1.52977098 NA 11.25342779 3.11473348 13.45791506 13.14731083 8.11472932 9.60122926 7.51845173 10.00819945 5.01089171 3.46836175 0.94478350 -0.05514155 9.38567348 11.00313438 7.65561086 4.15425915 9.85183772 8.18081870 9.81362697 6.77769455 8.91058877 -1.05529145 10.54703920 3.03225957 3.64524051 9.58902113 7.84645571 5.38774853 9.25200519 7.83354730 7.07408686 5.75215983 13.53667728 1.26675656 10.50370332 2.52977098 10.18440292 4.26673408 8.07408739 9.52223312 12.531264 7.440659 8.842650 12.021286 9.946213 10.837727 11.845860 8.917784 9.150598 9.764185 13.202192 9.902632 8.339267 9.470325 7.790294 7.178424 11.633055 10.961613 6.220930 11.273188 8.624284 8.662481 10.058234 6.588661 5.053329 9.824388 9.841893 NA 10.083076 7.832055 12.913111 9.934908 8.275721 9.476186 7.311126 5.617231 9.134629 10.102151 10.640902 9.638291 10.221510 7.933489 8.724524 9.999544 7.641772 6.248584 10.806667 7.659050 10.420031 10.762188 7.445288 13.597257 10.005500 10.148764 12.153191 12.440035 9.267859 -1.055291 TCGA-C8-A132 56 0 NA 44 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 asian not hispanic or latino 85.58.0 2 2 1 NA 1 5 2 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1.24885e-06 3.122126e-07 11.8971972 8.4520068 7.5488889 11.3449385 -1.3729535 9.7401390 NA 10.4063569 11.9955544 8.2325274 9.2816839 7.7691548 8.2816839 9.9262560 5.8558676 9.4392252 10.4186178 10.3604870 7.7994753 6.0020881 10.7534297 9.8371104 14.4979424 10.7466375 9.3257525 11.1378121 7.7511691 10.6358267 NA 4.2417563 9.0321893 12.9855617 13.2680271 7.8340620 17.1743115 12.9901560 10.1676604 3.9489746 NA 6.8558664 8.5884977 8.6100415 8.5294231 13.0867997 -0.3729535 10.2440561 12.9675239 4.8364998 9.0611965 11.1801972 8.2870437 6.9977350 -0.3729535 13.8013674 11.6340752 1.7969715 7.6877438 0.2120090 5.4344014 10.3592153 10.3621808 8.5429274 12.0208406 10.4768439 9.9302579 2.8749740 11.3447243 10.2879352 6.3617578 7.5754152 5.6043264 11.4528017 14.9106427 8.7265271 10.4858060 11.9306860 8.9889917 1.2120090 3.8749740 8.1564785 9.3387148 11.5976931 0.2120090 6.0364396 7.1623228 10.0828888 10.9604828 7.2816843 7.2343787 4.5339371 10.7306636 11.9070936 4.5096895 14.0752288 6.1348432 7.3309518 12.4824031 13.8754203 12.9060055 7.5841500 10.4464287 10.7078655 10.2130760 11.1978523 4.9124487 8.8291719 12.5683707 10.9920033 0.9489746 10.5895824 9.4623088 0.9489746 4.7157836 9.7270530 10.5537145 10.5335628 9.6178610 14.5418301 9.7459890 9.8019736 8.7394873 3.1506084 11.3863120 9.0946533 13.3935251 11.7894392 10.5399372 9.6542628 8.8714118 10.0913180 -0.0053992 -0.0053992 -0.0053992 0.0317180 0.0850760 -0.0384420 0.0857990 0.1280000 0.0982170 0.1244700 0.1244700 0.1244700 -0.2073400 0.3772600 1.2673000 0.1472600 -0.3445800 0.0513870 0.0513870 -0.0194520 0.2728500 0.1137400 0.1852500 3.6569000 -0.3383700 -0.1208200 -0.1208200 -0.1208200 0.5686300 -0.0053992 -0.0053992 -0.0878440 0.0395050 -0.0384420 -0.1338000 0.0857990 0.0857990 0.1280000 0.0982170 0.1118400 0.0151680 0.0151680 -0.5876800 -0.1722100 -0.2590200 0.1106500 0.1206400 -0.2831100 -0.2831100 -0.3283200 -0.3489300 0.0513870 -0.0650950 -0.1001300 -0.0085766 -0.3442300 0.1137400 0.1213800 -0.6322500 -0.3316800 -0.0069195 -0.3529300 -0.1208200 0.6030400 0.1331700 -0.3433100 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 10.2054206 14.1539750 6.6768964 10.4299681 6.4007138 11.7164984 4.5812428 2.5339371 8.3651400 8.7869191 0.9489746 8.6730532 2.0864781 10.2339157 8.9054974 2.8749740 10.2049488 9.1555021 9.1417620 9.3944048 9.9658902 7.8193406 11.2366884 3.2120090 7.7994753 9.9302579 6.0364396 1.7969715 12.2069530 2.3274862 12.2657101 12.1334795 8.5680956 10.1123741 8.7342649 9.2645784 5.4850275 3.5812428 -1.3729535 6.3685152 8.1835540 9.0554080 9.7850264 4.4850275 9.9968361 6.1662073 10.1931020 6.8019734 9.0427896 0.6270465 10.6840242 3.5812428 3.9845985 9.5557439 7.6867435 7.5899440 9.3161722 8.3952321 9.0997386 2.3274862 13.7666792 1.2120090 11.0239202 NA 8.5899440 5.2417563 8.6958261 9.2091899 12.845899 5.903173 8.753752 17.174311 10.460333 10.488135 13.086800 12.503565 8.691400 11.265710 13.206305 9.976329 9.338715 8.816873 0.212009 7.154524 12.210013 11.618215 6.776795 9.303886 8.957965 8.225100 11.460652 7.984600 9.325752 10.746638 7.006426 2.327486 7.930828 8.294071 12.131743 10.694146 8.458355 8.368515 11.369147 7.914760 8.542927 10.247726 11.406972 10.654263 11.053575 9.186425 3.086478 9.398603 8.252757 8.627048 10.960483 7.872600 11.503642 10.730664 7.469398 13.776119 10.317046 10.058023 12.412092 10.605401 9.951228 2.627046 TCGA-C8-A133 65 0 NA 0 breast stage iiia t3 n1 m0 2-10-2014 female 2010 NA NA other specify yes NA white not hispanic or latino 93.58.0 3 5 2 NA 1 4 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.112456e-07 12.2894081 1.4034313 7.3420569 11.6851945 NA 9.4970952 -1.1814766 9.4137525 11.1364729 5.2278874 9.8100169 7.4695466 9.3692418 8.5032438 8.9542045 8.6226262 10.7831969 9.2405598 6.0181668 -1.1814766 9.1471701 10.7624750 12.8598120 11.1251265 9.6741423 10.4637032 0.8185234 9.8007757 NA NA 5.0852802 11.2606611 13.8328207 7.8325154 12.3758391 12.5040104 9.2922008 8.2278859 4.9270194 2.7253922 7.6702441 7.7373582 4.2779253 13.3668956 1.9884120 8.3595919 14.6778357 1.1404515 9.8409392 10.4975352 1.9884120 8.9257123 -1.1814766 16.5936987 10.6498023 NA 6.4979748 0.8185234 1.9884120 9.1989562 9.9909225 11.7701441 8.6639850 9.0181673 9.3788278 6.5395947 10.3532842 9.1438005 6.9165268 8.1494118 -1.1814766 10.9532422 14.7755971 7.0350465 11.0406862 10.2588452 6.0279480 NA 5.0852802 6.6193954 8.4496720 10.9052948 -0.1814766 1.6258316 7.2942283 9.6780298 10.7121758 1.4034313 3.4623534 3.5733866 10.2326518 11.3467050 3.5733866 13.5331162 6.9112518 7.6576986 10.0747037 9.1749471 12.1121104 8.2840616 11.0586902 10.6612382 10.4753668 9.8919673 3.5733866 8.8071797 11.5947225 11.9051289 NA 10.5262856 8.5750513 -0.1814766 0.8470348 8.9296306 10.3508510 9.5067453 8.2447596 15.3614060 10.7388480 8.9217829 5.9580469 0.8185234 16.9457287 9.6576989 10.8680033 10.6426583 10.0963636 9.1505318 7.5430086 10.3063000 -0.00553750 -0.00553750 -0.00013862 0.00000000 0.00000000 -0.00180140 0.00000000 0.00291330 -0.00290910 0.00139140 0.00139140 0.01251600 0.88966000 -0.00541960 0.00027728 0.00027728 0.00027728 0.00903120 0.00610900 0.00110930 -0.00443120 0.00055459 -0.00277070 -0.00277070 -0.00277070 0.00013863 0.00013863 0.00013863 0.00194180 -0.00069303 -0.00553750 0.00013863 0.00000000 -0.00180140 -0.00180140 -0.00433090 -0.00433090 0.00291330 -0.00290910 -0.00290910 0.00022533 0.00499690 0.00139140 -0.00568900 -0.00568900 -0.00415460 -0.00415460 -0.00541960 0.00097064 0.00027728 0.00027728 0.00610900 0.00610900 0.00610900 0.00110930 -0.00443120 0.00055459 -0.00193990 -0.00277070 -0.00277070 -0.00027724 0.00013863 0.00013863 0.00194180 0.00180300 0.00763920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.9374362 9.0449072 7.3341946 7.5154625 2.8185029 10.9871672 NA NA 8.5241276 7.3921422 NA 4.5733806 NA 10.6698537 8.6934765 NA 2.4034586 8.8283238 12.8152334 12.0458102 9.8804872 6.7433076 9.6965460 2.6258549 10.7889605 9.3788278 3.9477784 NA 10.4118862 1.4034313 13.6506928 12.7889605 6.0473137 10.8839112 9.3769159 9.4322844 NA 0.8185234 NA 7.8128486 10.0046093 11.3471934 9.5223987 1.1404515 6.9217826 7.0328139 10.4391732 2.9059670 8.7133130 NA 11.0491160 -1.1814766 9.8697039 9.9092295 7.6023121 NA 8.4926872 6.5464161 13.1405640 NA 13.9852466 NA 11.5553198 NA 8.3063352 3.9884211 7.6919389 10.3178428 13.9274254 5.1760475 9.0340280 12.3758391 10.3435020 11.1619584 13.3668956 12.2922008 8.9125726 9.9777357 12.3515814 11.6588796 8.4496720 8.3361646 0.8185234 7.2405595 9.3262897 10.894643 6.511982 8.945199 8.728388 7.911252 9.614015 5.326289 8.887273 11.125126 7.887274 -1.181477 2.725392 6.181755 9.440547 9.466853 9.464153 10.092291 10.142676 1.988412 11.770144 10.323810 11.122561 7.349877 10.097525 8.728388 NA 10.057443 5.277925 2.518938 10.712176 1.140451 10.971730 10.232652 6.342057 14.148677 11.155559 10.460998 13.008397 9.123417 9.338131 NA TCGA-C8-A134 52 0 NA 21 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.324249e-06 6.244252e-07 12.3810509 4.3151894 5.1269233 11.6919859 -0.6544901 9.5923051 -1.2395661 9.3483794 11.0573748 9.2066513 10.0375987 8.5096333 8.7912691 10.3206959 9.4422796 9.6504862 7.7620099 10.3410961 8.7350164 4.5934912 9.8863383 11.6993546 14.1223059 9.9485725 10.1633475 10.3299830 6.4885230 10.4711889 6.9355281 1.9305103 8.5154893 13.7376806 12.9119753 5.3304580 11.4700089 10.0583781 9.2822023 5.1004521 2.5154854 10.1145758 8.4549597 9.5411417 6.4610423 4.9204743 -0.6544901 11.6604309 10.2282075 9.5146543 9.4369998 11.0864695 8.7378818 6.3151912 1.4610570 14.5617858 9.5399110 1.5679348 8.6193602 -2.2392255 4.8374185 9.6474417 9.3436847 9.3465033 10.5621083 9.4829826 10.1372700 2.5679591 11.6337576 10.1369987 2.4044672 7.8573173 4.6060928 7.1269243 15.6973262 8.0075684 10.6835579 10.6552303 11.1262409 2.1529297 -2.2392255 8.4893727 8.7836632 11.6176110 -2.2392255 3.3753175 7.3605144 11.5903247 8.4662343 5.0367275 6.4188140 5.9103489 8.7995209 11.9509668 2.8480570 12.8424598 3.9504311 5.7774092 9.5558300 13.1839477 12.7951001 9.3351954 11.3316435 12.1533889 11.0083233 10.7166150 4.2200358 7.8467384 12.0542173 8.7075082 0.5679348 10.5821766 10.1148514 1.4610570 3.5646099 9.7151619 11.0501886 10.7519467 9.8743441 15.6983608 10.4501632 10.4358974 6.0226963 0.5679348 11.0073426 7.6719939 12.6499633 11.9858094 10.2459282 8.6271081 8.1071156 9.6704088 -0.5609700 0.0345360 -0.0318500 0.0765660 0.0793030 -0.0090611 0.0788710 0.0781500 -0.5740700 0.0454240 0.0454240 1.0855000 -0.5383300 0.0619370 0.0242680 -0.5183500 0.0109820 0.0356650 0.0180050 0.6014200 -0.5319500 0.0409570 -0.5095000 -0.5095000 0.0679480 0.0496820 0.0496820 0.0502500 0.6229700 -0.5051500 0.0345360 -0.5588700 -0.5444100 0.0511030 -0.5830400 0.0332670 -0.5687200 0.6684500 -0.0165670 -0.5375400 -0.0098185 0.6162500 -0.5629600 0.0322810 0.0322810 0.0322810 -0.5165100 -0.8269200 -0.3876100 0.0676610 0.0358060 -0.5175300 0.0432990 0.0784380 0.0164250 -0.5094000 -0.5317000 0.6627200 -0.5095000 0.0679480 -0.5413800 0.0496820 0.0502500 -0.5408800 -0.0247980 0.0400440 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 8.5129826 12.5123029 0.3455099 9.4361181 4.3965020 11.2141298 2.8898823 0.3455099 9.7860876 7.5188254 2.4044672 9.7246143 2.2841587 10.8982335 9.5258880 6.4817010 8.3651553 8.8645455 7.0643828 9.0303132 9.2008118 7.3734707 12.0665212 2.4044672 8.6935549 10.1372700 3.3455667 NA 10.6688069 1.7606042 12.5812297 12.2700059 8.1593456 9.2317691 10.1170540 9.7016495 4.3605118 3.8266908 -0.6544901 4.2524535 8.3899587 9.0689411 6.2282069 3.9504311 10.0526964 7.5711739 9.6697450 4.9305292 10.0165157 2.1529297 13.0178056 2.4044672 5.6854132 10.7524143 6.6118820 5.4471031 9.0500445 8.4152381 6.5966519 5.2282069 12.9542813 1.4610570 11.1200770 -1.2395661 10.6178055 4.9305292 8.2978205 7.8573173 9.771480 9.302183 8.790579 11.470009 10.708571 10.859950 4.920474 10.666741 9.247437 10.348848 12.560339 10.745732 8.783663 8.059810 NA 8.009716 11.265917 10.287346 5.228207 8.216956 9.653904 5.481703 9.363301 6.720604 6.315191 9.948573 10.492769 2.082532 6.708969 10.289713 12.808578 11.145925 7.493617 9.548912 9.350253 6.360515 9.346503 9.934903 10.783143 9.996018 10.234308 9.391779 NA 9.825237 6.845091 6.802262 8.466234 6.912887 10.141875 8.799521 7.966688 13.659817 10.008233 10.874995 13.164313 11.611668 9.171583 1.220020 TCGA-C8-A135 64 0 NA 19 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 asian not hispanic or latino 85.58.0 6 3 4 NA 3 5 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 9.17776e-07 2.781139e-07 11.8424879 6.3901002 6.0012460 11.4921763 0.8822909 9.3980048 -1.1177874 9.8335897 11.6048990 6.5333562 8.8752434 7.4822174 8.7199329 10.3915852 7.9402966 9.3509290 10.0534817 9.8724089 7.3085693 1.4672795 9.5991244 10.7584382 13.8667234 9.9074446 9.2627660 10.8354101 6.9908290 9.5180230 -0.1176308 0.4672795 10.1159246 12.1934856 11.8441363 7.1302328 16.5560902 12.5465300 9.9684412 5.5965506 3.0522246 6.5116610 8.9999482 8.3169331 7.8509719 12.8682358 NA 10.9153838 11.2266009 3.4058699 9.0175782 11.9292584 8.4540574 7.7309279 1.4672795 12.3600885 9.3324233 -1.1177874 10.1624957 NA 5.6636634 9.6480054 10.7375628 9.6136239 10.0776772 10.0528560 10.2160194 1.2042033 10.7211149 9.9809951 4.3085720 6.8991128 -1.1177874 9.7518988 15.2244491 6.8506257 10.7024839 10.5918196 7.9430006 1.2042033 1.2042033 8.6488339 9.0345899 12.1044961 -1.1177874 6.7951942 6.5617844 9.3610746 11.3638522 5.1490927 6.1014736 4.8364998 9.5216456 12.0789071 -1.1177874 13.1690793 3.8364998 6.5757918 12.1728998 13.7921512 12.5155273 6.3417367 10.6932782 10.5542882 9.8233526 10.9301105 4.2398563 8.6371925 11.3570249 9.5991244 5.2221554 10.1443998 10.2486272 0.8822909 3.2787431 9.5449733 9.1171223 9.4330517 8.7495835 15.1621694 11.1977376 9.9631225 6.7151946 1.4672795 14.7859515 9.1803674 14.3334195 12.6215582 9.9986490 9.9143507 8.4407255 10.1374811 -0.1437900 0.2303500 0.2303500 -0.2482500 -0.2482500 0.0610790 0.3868400 0.0462750 -0.3278500 -0.3471000 -0.3471000 0.7802200 0.0502500 0.0502500 -0.3271600 -0.1469500 -0.1469500 0.0878240 0.0878240 -0.3036900 0.0526680 -0.3389400 0.3268900 3.6569000 0.6017800 -0.3567000 0.0283410 0.0283410 -0.0321780 -0.1437900 -0.1437900 0.0329860 -0.2482500 -0.3745000 0.0610790 -0.1351000 -0.1351000 0.0462750 -0.3278500 0.0465590 0.0461330 -0.3655600 -0.3471000 -0.0081624 0.0000000 0.0000000 0.0000000 0.0502500 0.0368940 -0.3457000 -0.1469500 0.0878240 -0.3454900 -0.3454900 -0.3280900 0.0526680 -0.3389400 -0.1456700 -0.3469800 -0.3513300 -0.3300600 -0.3567000 0.0283410 -0.1787900 0.4231800 0.0481200 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 8.9046729 13.4959793 9.4426377 9.5494166 2.4121312 11.6765177 0.4672795 2.0522420 9.3831468 7.7340538 -1.1177874 8.1225718 3.7402908 10.8801901 8.8071176 0.4672795 8.3801567 9.3273198 10.5333566 13.2375184 9.3051897 7.7183555 11.3140637 3.6896570 6.5043566 10.2160194 4.2398563 NA 11.1903595 1.6896570 13.3997898 12.8698355 8.2176955 9.4775624 8.5025247 10.1044961 5.1860845 2.5827487 NA -0.1176308 8.1769256 10.9561118 8.9348729 5.0115896 8.3006848 8.0167314 9.3148469 6.2042327 10.6554441 NA 10.8592270 5.0115896 3.8364998 9.9599352 5.6358559 6.3499101 9.1385137 8.7936969 8.0622140 1.8822909 14.7913777 2.3417296 10.4602058 NA 9.4048865 5.8011690 8.2266010 7.7557489 10.530213 7.111123 8.777123 16.556090 9.545863 11.052230 12.868236 9.960456 9.258430 10.826285 13.432330 12.159302 9.034590 8.493330 NA 8.655444 10.852051 11.6168029 5.0320523 8.9684413 8.2916961 8.1769256 10.9252912 7.1723235 6.3741579 9.9074446 7.5896639 0.4672795 7.9750621 7.3194328 13.5029830 10.6844174 9.1642349 8.8233526 9.5731761 6.5965506 9.6136239 11.0106215 10.8826571 10.2681673 10.5520759 9.0205766 4.5261627 9.5569034 8.7588065 7.1302328 11.3638522 6.7771225 10.7379521 9.5216456 7.5369411 14.1399506 10.5498600 10.3605689 11.9847728 10.8674354 9.2735485 2.0522420 TCGA-C8-A137 34 0 NA 117 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 6 3 1 NA 1 5 2 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.899646e-07 2.503025e-07 12.18992689 5.27679068 7.15305644 10.74919031 -0.91294457 8.77171560 0.08691961 9.93010291 11.54665475 6.13136106 9.61834842 7.08132045 7.58681277 10.23417197 5.08696630 9.69337213 10.40833144 9.28049241 6.73801928 NA 9.99460886 10.97988923 13.48276888 10.41002177 9.30128606 10.40041689 2.89431334 10.40211661 NA NA 8.06996043 11.61248783 11.98877670 7.14224902 16.94695062 13.33147950 7.97266336 6.10933548 1.67192738 5.88138320 8.69429729 5.23671455 7.27679161 12.44781408 1.89433274 8.89109803 12.62126989 6.69429798 8.88948328 11.86771179 7.93871628 6.93245690 NA 12.35279885 8.92459490 NA 7.40889524 NA 1.08698752 9.58880419 9.70993401 9.11625428 11.41872372 9.61542108 9.50059494 0.08691961 10.68501952 9.76820534 3.54640062 6.78740634 0.67192738 9.01177962 14.78781307 6.44319885 10.71221926 12.36962109 6.59476201 0.08691961 2.54638827 8.14766285 8.72901873 10.81913439 NA 5.98178417 7.33014066 8.72540307 11.42263647 5.47928554 2.99385548 4.54640062 10.45492775 11.85473766 2.78741157 13.01001587 5.57882100 6.20590856 11.15002496 13.52413386 12.67157724 6.93871628 10.63867529 11.09399426 9.87486949 11.00060442 4.91985490 8.78740667 11.94824782 8.81658787 NA 10.01548544 9.88381782 NA 2.54638827 10.38903467 10.88988721 10.24998770 8.91351537 15.29109870 10.80806619 10.03825166 7.19025434 0.08691961 15.09751696 10.01548544 12.49064481 12.19614469 9.60168110 8.70351569 7.93558999 9.64443063 0.00624810 0.00624810 0.01572700 1.49670000 -0.00926660 0.00652620 0.06222300 -0.00055444 3.65690000 -0.00166290 -0.00166290 1.47810000 -0.05239600 -0.02178400 0.00986690 0.09289500 0.09289500 0.00791750 -0.00227240 0.03129500 -0.71372000 0.04925600 -0.73064000 3.65690000 -0.70505000 -0.01862800 -0.01862800 -0.00995650 0.06479700 -0.00512270 0.00624810 -0.74586000 -0.72747000 0.00652620 0.00513590 0.00000000 -0.01711600 0.02146300 -0.73249000 -0.74577000 -0.77414000 -0.00027724 -0.00505320 -0.71631000 -0.71631000 0.01265500 0.66272000 -0.02192100 0.65627000 0.00986690 -0.72906000 -0.00227240 -0.00227240 -0.00227240 0.01684500 0.00903120 0.03228100 -0.71087000 -0.73064000 -0.72958000 -0.00732840 -0.01862800 -0.00995650 0.07009900 -0.64499000 0.00097064 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 6.9998569 12.9347095 6.8748695 8.6530210 1.0869875 11.9565609 NA NA 9.4201223 7.1368158 NA 8.3095205 3.5464006 12.1127987 9.0309468 NA 6.8351598 9.5627003 12.2927602 11.1869722 9.4476494 6.7308233 10.1915657 NA 5.4268182 9.5005949 NA NA 12.1330679 -0.9129446 12.0920652 12.2176984 7.2718421 9.9680810 8.0177043 9.8191344 3.3348972 NA NA 3.4792823 8.7344255 9.4717508 10.5195089 3.1744224 8.1988070 7.6026669 9.8526675 6.5627003 10.3861751 NA 9.7778380 2.6719274 2.8943133 9.7131323 6.2501639 3.4088885 8.0699604 6.2668765 10.0649623 0.6719274 14.1519202 1.0869875 10.1677845 NA 9.8148875 3.6105347 8.2890907 8.3514097 11.720114 8.163782 9.426817 16.946951 10.083716 11.025076 12.447814 9.029482 10.063531 10.616398 12.528614 9.804643 8.729019 8.236714 1.894333 6.759393 10.782195 11.370055 5.828434 9.136816 9.276792 8.136815 10.401193 4.841852 4.546401 10.410022 7.664396 2.993855 8.921438 6.737588 12.021026 9.637714 8.426817 8.806356 9.446717 3.944952 9.116254 9.985568 10.225879 8.995360 11.096096 8.919857 11.028748 8.478340 9.940471 4.256890 11.422636 6.610529 10.976851 10.454928 7.562700 14.309120 11.008436 10.404945 11.675447 10.590296 9.782195 1.408875 TCGA-C8-A138 54 0 NA 114 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 85.58.0 6 3 4 NA 1 4 1 2 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.14478e-06 3.122126e-07 10.81659867 6.38766066 8.47980168 10.87892347 0.03899798 10.66509773 0.03899798 9.28567293 10.77194771 11.44726211 10.06476405 7.48601522 8.48394715 9.38322821 7.54275795 9.95331748 9.18231564 10.29749844 7.52274786 5.30571887 10.80048361 10.04946047 14.40603994 10.92500997 9.30454732 10.41505775 8.20383934 10.15006801 1.03892777 9.88833747 8.38544614 11.02299476 12.17496222 7.62389466 13.68098406 12.60902525 9.13696446 4.20886057 1.62391367 7.29632066 8.68639092 9.77533422 8.02477455 12.88931458 2.90089578 10.97372893 13.33340953 2.03892777 10.49001981 10.82356723 7.74973872 8.97114719 3.89691118 14.60160411 10.84698756 NA 7.96671020 NA 5.54672781 8.76855322 10.38599998 9.52978328 9.49220311 9.70781741 9.63232348 3.28686637 10.51060763 9.30571887 7.84306366 7.03328533 12.28121331 10.48549878 14.46506606 7.75688319 10.64995714 10.13498866 8.68998400 2.62389027 3.03892777 7.14745731 8.58196429 10.25385859 1.36086990 6.85911108 7.39207953 11.02406275 11.19911896 7.11574804 7.22875713 4.71135724 10.58099688 12.10131587 5.16821680 13.56933871 9.33470123 9.97262302 11.45414597 13.79507167 12.98793831 8.49631334 10.32779850 10.47928251 9.57906038 10.07028896 3.28686637 9.00038204 11.47876325 9.18867958 NA 10.38267330 8.19627950 0.03899798 6.82683446 8.68278852 9.49528683 10.60783850 8.99167376 15.92334141 8.95779565 10.05015965 9.49528683 3.73937289 13.98752775 8.76174003 12.68346468 11.48109834 9.56347410 9.89380070 8.73937221 9.90897334 0.0808890 0.3053700 0.3053700 0.0587950 0.0093098 -0.4604600 -0.1445100 0.1424700 0.0448570 -0.4612100 -0.4612100 0.8653300 -0.1556000 0.1077400 -0.1706600 1.2791000 -0.1682800 -0.0706700 0.1437000 0.0000000 0.4314200 -0.1582200 -0.4618500 2.0259000 0.1465200 -0.4465200 -0.4465200 0.0962340 1.5072000 -0.4590600 0.3053700 -0.4914100 0.0587950 -0.4604600 -0.4604600 -0.1445100 0.1644500 0.1424700 0.0229580 0.0448570 0.1625000 -0.1298200 -0.4612100 0.2067200 0.2039600 -0.1472100 -0.1472100 0.1077400 0.1077400 -0.5111500 -0.1682800 -0.0706700 0.1432300 0.1432300 -0.1518300 0.4417200 -0.1582200 -0.4643800 -0.1474700 -0.4417800 -0.4904700 -0.4397300 0.0962340 0.1465200 -0.1551500 -0.4538300 -0.156 -0.048 -0.171 -0.171 0.000 0.143 0.000 0.442 -0.158 0.072 -0.442 -0.039 0.109 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 -0.156 -0.048 -0.171 -0.171 0.000 0.143 0.000 0.442 -0.158 0.072 -0.442 -0.039 0.109 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 10.15397604 13.28893465 3.68278676 10.03328575 3.15080335 10.78586650 1.03892777 0.62386686 8.28210615 8.34499400 -0.96100202 7.91336038 1.62391367 10.78082065 8.94582304 4.46519742 8.19121717 9.65087924 6.76003195 10.93791159 8.60062137 7.14222043 11.70204569 1.62391367 8.21135978 9.63232348 3.43124853 NA 11.15884614 1.62391367 13.16014208 12.10401186 8.92157528 10.46414832 9.38655382 9.84225636 4.24838303 1.84627266 -0.96100202 12.97851159 8.06959960 10.39813282 11.21260952 5.39648491 8.75832117 8.15527616 9.89924347 5.88442209 9.34840882 -0.96100202 9.92691446 0.62386686 5.03893215 9.47647647 6.43056294 6.61636064 9.42371619 8.45467395 9.57323534 0.03899798 14.37770357 1.03892777 10.87458805 NA 7.79715568 5.62389612 8.45467395 10.30278844 12.4641575 4.5935211 8.0389322 13.6809841 10.8161877 10.4541460 12.8893146 9.3220207 8.9046656 10.0111943 13.0665792 7.6201333 8.5819643 9.8487005 0.6238669 7.5227479 11.4602083 10.585827 4.820291 9.261727 9.349545 7.418311 10.115808 7.865481 6.431250 10.925010 7.208858 3.623890 4.530782 7.818520 10.404161 10.756609 8.308059 9.385446 8.206351 7.616361 9.529783 11.129706 10.356910 9.775334 10.199434 7.589679 2.739373 8.889432 8.031559 8.155276 11.199119 7.426950 10.456563 10.580997 7.248386 14.105947 10.170146 10.706931 11.596875 10.612106 9.320862 3.793823 TCGA-C8-A1HE NA 0 NA 375 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 109.61.0 NA NA 2 4 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 2.224912e-07 10.6482947 6.8976156 7.7934414 10.9940142 -1.9002335 10.2801743 -0.3150915 10.0911218 11.7493228 10.3529154 10.0725752 8.4218826 8.6507010 8.0380635 7.5428980 9.3928510 10.5761943 9.3876667 6.6545429 0.6849085 10.6335275 9.6381434 13.2535460 10.6412930 9.2854494 10.5387462 4.1874194 10.8537874 -1.9002335 2.0068366 7.5345822 12.5194538 12.9458364 6.1927110 13.4061941 13.8770555 8.4706418 7.5573350 4.9703199 5.6545444 8.1579461 10.0992497 6.5135823 13.7143191 1.9073137 10.7612871 14.7287132 6.7146645 9.7941382 11.0399008 7.5072222 8.1807720 -1.9002335 13.9264649 8.4173669 -0.3150915 7.3167006 -0.3150915 4.7438111 10.5978062 10.3971572 10.9125328 11.6520230 10.9259069 9.8038579 3.7723819 12.0248596 10.1787723 6.7183397 8.9352152 -0.8999643 12.0480478 14.4272439 8.9777141 12.0765185 11.6880834 8.2547726 NA 4.8813122 7.9407323 8.9296771 12.6523833 -0.8999643 5.6468481 7.5050962 9.8047227 11.3728757 4.3667418 5.7072846 4.2497032 10.8280874 11.8486714 2.7438165 13.4438687 6.2848306 8.3057476 11.7296525 11.9242170 13.2678821 8.6381434 10.1515032 10.3136661 10.2571687 10.9795376 5.3667418 8.4420291 11.9289833 11.1283785 NA 10.1714168 9.5650105 0.9072753 3.0092397 10.1412713 10.7541428 10.6035317 9.3002400 15.0458782 10.1146723 10.0229104 9.7210905 2.0999684 16.6741487 10.0180722 13.4270157 11.3655694 10.4928084 8.9113291 8.9772384 10.7917350 0.01419000 0.57916000 0.07944700 0.07810900 0.07810900 0.00610900 0.11060000 -0.00572230 -0.00304750 0.00402430 0.00402430 0.00402430 -0.00651170 -0.00651170 0.00708260 0.00708260 0.00708260 0.00000000 0.00000000 0.00930980 0.00270310 0.01349200 -0.01230000 -0.01230000 -0.01230000 -0.00470790 -0.00470790 -0.00470790 0.01950300 -0.64180000 0.01419000 -0.00595220 0.07810900 0.00610900 -0.76372000 0.06122200 0.06122200 -0.00572230 -0.00572230 -0.00304750 -0.00180140 -0.00180140 0.00402430 -0.01876500 -0.01876500 -0.01876500 -0.01876500 -0.00651170 -0.00346270 0.00708260 -0.62360000 0.00000000 0.00000000 0.00000000 0.00041593 0.00270310 0.00535100 -0.79216000 -0.01230000 -0.01230000 -0.61239000 -0.00470790 -0.00470790 0.01950300 0.02020300 0.02230400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2773739 12.2617161 5.3383602 9.7374850 2.2698710 11.2282710 1.4218561 NA 8.2032423 6.9764713 NA 7.4146734 0.9072753 10.1757677 9.3922760 1.2698710 7.9672332 9.4353448 11.9075106 9.8907101 9.9285233 8.5366661 10.2305250 3.9073137 9.5619453 9.8038579 3.2698859 0.4219100 10.1660435 2.9073137 12.0392581 11.6619582 7.4173673 10.4080089 9.0978396 8.9360048 4.4398026 -0.3150915 1.2698710 5.2497032 8.6516627 8.9594891 10.7708319 3.5593817 8.4996275 6.6886685 10.5178069 6.1443483 9.6702845 NA 12.3775324 0.9072753 4.2292341 9.7807051 6.5043296 3.0999516 8.9563799 7.0306914 5.5837688 -0.3150915 13.5458099 -0.3150915 9.6588534 NA 8.0321692 5.0306936 8.0556040 9.4771649 12.78029851 5.22923797 8.33117538 13.40619411 10.74628807 10.35940345 13.71431914 12.60359380 9.45575133 11.14673737 13.31188067 7.86150569 8.92967710 8.71558386 0.09990111 7.77237990 11.34372343 10.8594265 8.2711310 9.2188954 8.9032784 9.0075961 10.3092371 6.5304063 7.2673729 10.6412930 6.0306914 5.1660445 5.5511653 6.3061875 10.0373281 10.2591950 7.6679106 7.6942792 13.2028733 4.2698785 10.9125328 10.3320755 11.4642258 8.8287252 11.0628504 8.8380466 -1.9002335 9.1790258 6.8842291 4.4749941 11.3728757 6.1278602 10.6415011 10.8280874 7.3167006 13.5947787 9.6980069 10.1744304 13.2465230 10.2931717 9.9379764 0.9072753 TCGA-C8-A1HF NA 0 NA 332 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 103.51.0 6 3 4 4 NA NA 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.562279e-07 2.224912e-07 11.8843678 1.4184598 7.6104801 10.5933869 -0.1665027 9.2715975 -0.7514652 9.4457530 11.4405208 7.1219800 9.7647288 6.3306857 7.7483821 9.1357570 8.2386402 9.0323530 10.4716329 10.9132058 7.7760132 6.7681724 10.8521626 9.8964444 12.3961387 11.4131290 9.8055212 10.4515783 7.8145902 11.2206186 NA 0.5704629 8.4159542 10.3058512 12.8413437 7.2343787 17.4069759 11.6476807 8.4579898 6.5568754 2.7720968 6.1372801 9.2085382 7.6997473 6.9524396 12.5899856 NA 10.1006756 13.3246838 0.2485348 9.8609440 10.7338625 6.3253522 4.5883848 1.4184598 14.5977114 9.6805561 -1.7514652 8.1311794 -1.7514652 5.6494171 8.9394073 10.2867694 7.4408293 10.1606771 9.7813792 9.6462109 0.8334973 10.3169787 9.4779559 6.4234622 6.6956195 0.2485348 9.9240524 14.7547354 6.4517864 9.8991394 10.6154049 8.5727169 1.8334973 2.3359977 8.1219805 8.6589876 12.8806227 -0.7514652 6.3518244 7.0494358 11.3343407 11.4934947 6.7323520 7.6472800 5.1792722 8.9704899 12.4766034 0.5704629 13.2519224 6.7992829 6.7642360 11.0021709 13.0853263 12.1710278 6.5839267 10.8332639 11.2980445 10.3068663 10.7622638 3.5339371 8.9129836 11.9512501 10.7371296 -1.7514652 10.2207981 9.1814892 -0.1665027 2.4903647 9.4014549 10.9424588 10.2754054 8.8174426 15.2577526 10.4558557 9.2922471 8.2805820 1.2485348 15.5025130 9.1403201 12.3440981 11.5639689 9.8339683 9.1954426 7.6956195 9.6034963 0.080889 0.080889 0.072089 -0.580090 0.351860 0.082188 -0.241370 0.088548 0.088548 0.057013 0.057013 0.080456 -0.016979 -0.016979 -0.242040 -0.242040 -0.242040 0.025390 0.025390 0.079303 -0.235690 -0.601490 -0.578810 3.656900 0.635180 -0.270710 -0.270710 -0.268290 0.022444 0.061222 0.080889 -0.572690 -0.588670 -0.614520 0.664780 -0.222810 -0.222810 0.088548 0.088548 0.088548 0.070181 -0.592630 0.057013 0.065370 0.065370 0.064654 0.064654 -0.016979 -0.016979 -0.242040 -0.242040 0.025390 0.000000 0.000000 -0.579600 -0.235690 -0.585100 -0.600790 -1.292900 -0.565050 0.068665 -0.270710 -0.270710 0.022444 -0.583820 0.036229 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 8.8815316 13.7322576 5.8334999 8.6235757 3.4067951 12.2890829 0.5704629 NA 9.3577141 8.7413908 NA 7.9530627 2.8334973 10.8623258 9.0034237 3.7720968 5.9489769 9.9979867 9.9798553 11.1657219 8.5422608 6.6494157 10.8646256 1.0558898 8.8012052 9.6462109 1.4184598 NA 11.0617162 3.3359977 13.3002550 12.4444467 8.4518845 10.0429522 10.8785758 9.6690229 2.1554254 1.7079665 -0.7514652 4.6914783 8.3880875 9.5540282 10.2826474 1.0558898 6.3987403 7.2929308 9.9925291 6.6060883 10.2009136 NA 8.5035650 1.9489746 3.4184598 9.6350723 5.5425150 7.3752410 8.7963946 8.4940891 10.0050926 -1.7514652 14.5913402 0.2485348 10.1501574 NA 9.7074554 4.3778179 8.6758491 8.0050928 10.826274 8.360976 8.676896 17.406976 10.435888 11.416111 12.589986 8.749378 9.227690 10.223668 12.823898 9.051053 8.658988 9.397013 2.248535 8.772098 10.303480 11.0770695 6.1494037 9.0940262 9.5665142 8.5983704 9.6475685 7.4334118 4.6235743 11.4131290 9.7443914 -0.1665027 8.3570606 8.4871800 11.9005970 10.3156345 8.3791067 10.0861642 6.9455035 7.9350365 7.4408293 10.4920078 10.3336768 9.0461977 10.4106129 7.8031250 10.5805728 9.4637052 7.5784225 8.5094560 11.4934947 8.2597635 10.8813043 8.9704899 7.4946828 14.7849353 11.0560924 10.8669218 11.8643958 11.2324206 9.0742900 3.9209602 TCGA-C8-A1HG NA 0 NA 345 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 103.51.0 3 2 5 5 NA NA 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.674735e-07 4.449823e-07 12.2711173 2.8740887 6.6606805 10.8340864 -0.4479181 10.5394204 1.5521803 9.5703565 10.9151960 7.0599512 9.9380187 7.1520688 8.3882068 9.4469741 7.3913605 7.5121581 9.3771151 10.3186853 6.5855800 6.4590463 10.1751234 9.0054269 13.1927402 10.4309736 9.1668663 10.4567910 8.3137075 10.9380187 NA -0.4479181 7.9271960 10.4575434 13.0913152 9.3318758 10.6495301 10.6827269 8.0520023 1.5521803 0.5521803 7.0599512 8.5828235 11.4932039 7.6762780 12.3174425 NA 10.1696238 13.1327683 0.5521803 10.2655429 12.1347688 5.9615469 6.3465722 -0.4479181 15.7586681 9.9008845 NA 8.1557826 NA 6.8375586 8.4163424 10.8616327 9.2085811 9.4530232 8.6685003 9.7506015 1.1371100 10.5387095 9.2085811 5.8189426 6.5179402 NA 9.5689647 13.7514453 7.5270297 10.6554441 10.6040450 8.3137075 -0.4479181 4.8375598 7.0197620 8.5883301 10.6222773 NA 5.8740838 6.8467766 10.7658681 11.3178568 5.9271948 7.1371192 4.7220834 10.2698328 11.8314768 1.1371100 13.3691400 6.0440093 7.7419806 12.6595369 12.3461660 12.0141473 7.5063528 9.9030955 11.6087941 11.0559821 10.6587193 4.0757209 7.9358604 12.2294356 8.2491239 -0.4479181 10.6833703 10.9615473 NA 1.5700743 9.5236999 10.6501884 9.8375586 9.8282807 15.3465976 10.2298760 11.8107224 6.5294368 4.0757209 15.5983425 7.1815131 11.2564923 11.1276956 9.5019830 8.6316413 7.4286734 9.1562646 0.0225850 0.1048200 -0.0467180 0.3525100 0.2959600 0.0335850 -0.1391700 1.7082000 0.3183500 2.4241000 1.1547000 2.4670000 -0.0406470 -0.0904250 -0.3819000 1.9362000 -0.3969400 0.0100060 0.6756700 -0.2528500 0.0076392 0.2653100 -0.3757200 0.3060100 0.3060100 -0.0279450 -0.0279450 -0.0279450 0.2794700 0.0225850 0.0225850 -0.2330000 -0.3055700 -0.0440210 0.0335850 -0.0902290 0.2477800 -0.7059600 -0.3895100 -0.4266900 0.0000000 0.0404680 -0.8019400 -0.3813400 -0.3813400 0.2888100 0.2888100 -0.0904250 -0.0765450 -0.3738100 -0.3824600 -0.7103300 -0.2978000 -0.3235600 -0.2393600 -0.6658700 -0.0319050 -0.3669100 -0.3757200 0.3060100 0.8516600 -0.0279450 -0.0279450 0.0200350 0.0813220 0.1772400 0.000 0.000 -0.397 -0.397 0.000 0.000 -0.253 0.000 0.000 -0.094 -0.367 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.691 -0.093 0.289 0.262 0.000 0.000 -0.397 -0.397 0.000 0.000 -0.253 0.000 0.000 -0.094 -0.367 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.691 -0.093 0.289 0.262 9.3818790 11.4209789 2.8740887 8.8212829 3.6387689 10.2986707 1.5521803 0.5521803 8.8421753 8.1408712 -0.4479181 6.8000845 NA 11.1009782 8.8375586 1.8740887 7.1887807 8.9206628 7.2103674 10.7202016 9.1095627 6.3335168 9.6128523 1.8740887 7.5179410 9.7506015 4.1371182 NA 10.7579496 2.3595212 13.0849993 12.6939442 7.6710973 9.7270820 10.5675714 9.9950999 4.3070423 2.8740887 NA 1.5521803 8.9444737 8.7044411 8.3367913 2.8740887 8.0871981 6.5745239 10.1548552 4.5063544 10.2560599 NA 11.2525961 1.8740887 2.1371100 9.8265695 5.3408435 8.5379984 8.7419809 8.2103679 9.9878266 -0.4479181 13.4395674 -0.4479181 10.8576481 NA 8.4946708 4.4590447 8.9401735 7.2245815 14.037290 4.978420 9.179690 10.649530 9.295308 10.654788 12.317442 13.140403 8.596551 10.115353 12.325296 11.427906 8.588330 8.359511 1.552180 7.828281 10.309546 10.818357 5.874084 8.909708 8.839869 9.450002 10.084054 6.540841 8.950900 10.430974 7.203208 NA 5.333517 8.133545 8.942325 10.297831 8.652819 8.413243 9.140871 8.959424 9.208581 10.266402 10.334336 8.333516 10.729576 7.851364 5.639620 9.063158 6.333517 8.957298 11.317857 6.422521 11.098086 10.269833 7.217492 13.918957 11.302026 10.397646 12.334950 10.036979 9.523700 5.574525 TCGA-C8-A1HI NA 0 NA 345 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 103.51.0 2 2 1 4 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 2.503025e-07 10.96279423 7.24957713 6.26907430 11.06619086 0.63487202 9.86528818 0.04990952 9.83821546 11.53145208 7.12404685 10.24742877 8.01424593 8.22483038 8.86127956 6.15319328 9.42494434 9.72674353 9.67880610 7.35368586 1.37183762 9.77654884 9.66966638 13.18793666 10.24219769 9.28711486 10.77121774 4.04990081 10.56410851 1.63487202 2.29783704 7.23725681 12.95411614 13.13769922 9.74556828 13.43815769 13.46095240 8.87724762 5.82469149 2.50934114 7.09429942 8.58128646 9.13471329 9.05342282 13.43175199 1.37183762 9.66691314 13.90309261 4.45929390 9.57579278 11.54738254 8.34567402 10.32690166 4.09429520 13.59484972 8.72938486 1.04990952 7.66093004 NA 4.33530459 9.90982785 9.49233011 10.14497224 10.28232582 9.64888782 9.43846045 5.58128496 10.63721363 9.49388446 5.54175952 7.01857186 0.04990952 11.14760784 13.96155436 7.05945371 10.33270379 10.78546097 7.66645340 1.37183762 4.54175642 8.53271280 9.18881654 11.47905009 0.04990952 5.95077167 7.49905338 9.57346693 10.95472762 8.03858982 5.51751192 4.09429520 10.00882006 11.99241942 2.44222695 13.69302829 5.70811549 7.75034455 12.15425794 11.89412027 12.73355750 8.12538402 10.45344957 10.67971689 10.28626596 10.56782026 3.98063772 9.24957736 12.04434675 11.18176189 0.04990952 10.30788191 9.33934742 0.37183762 3.69520323 9.27631706 10.54326000 9.67195674 8.73289936 15.87758874 10.35082937 10.12972297 7.83943876 4.17918458 15.76161220 7.43360881 12.21943849 11.64900413 9.95077167 9.18304702 8.37070528 10.85481837 -0.0824020 0.7896800 0.7920000 0.1936000 0.1748300 -0.0490190 0.2194400 -0.0677030 -0.0536110 0.1667000 0.2102400 0.1961900 -0.3175800 -0.3018700 0.0326740 0.0150280 0.0150280 -0.3109600 0.4101600 -0.2102000 0.1952800 3.6569000 -0.2074700 -0.2074700 3.4219000 0.0000000 0.0000000 0.0000000 0.1855600 -0.0824020 -0.0731610 -0.0514510 0.1936000 -0.0490190 -0.0490190 0.2365000 0.2365000 -0.0677030 -0.0536110 -0.0536110 0.1685000 0.1685000 -0.6091200 0.0070826 0.0516720 0.0516720 0.0516720 -0.3018700 -0.2944900 0.0326740 -0.3204300 -0.3109600 0.4101600 0.4101600 -0.2131800 0.1755800 -0.0546900 -0.3275000 -0.2074700 -0.2074700 -0.2943800 0.0000000 0.0000000 0.1855600 -0.0212350 -0.3326000 -0.302 -0.302 -0.320 -0.320 -0.311 0.099 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 -0.302 -0.302 -0.320 -0.320 -0.311 0.099 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 8.29783245 11.67390065 7.79473881 9.31434759 2.10128028 10.47538305 0.04990952 1.04990952 8.75898867 7.95227998 -1.95009048 7.44864826 1.85726444 10.79599928 9.09019474 2.13737236 7.46141560 9.80144889 10.35482656 10.68607632 10.12280121 7.37183326 10.22670143 2.21983452 9.92411785 9.43846045 4.67926051 NA 12.07720621 4.72232940 12.80233781 12.13305177 7.76929371 10.27481096 9.54925253 9.54625938 3.54176262 1.85726444 NA 6.85080442 8.58906384 9.10043370 10.66737237 4.94472260 8.87205335 5.21983065 10.18111883 5.54175952 10.10721982 0.37183762 10.72365565 0.37183762 5.21983065 10.07891253 7.32381679 5.18945692 7.96279423 7.59293686 10.28082597 1.75034924 14.28116359 -1.95009048 10.58882133 NA 8.39309052 6.46353255 9.65769752 8.53874921 12.680785 5.777825 8.896179 13.438158 10.353686 11.771218 13.431752 15.982223 9.164949 9.913704 13.417251 9.354827 9.188817 9.794318 1.857264 9.958673 11.234315 10.6819913 6.1996527 9.0257528 9.3819415 7.6254444 10.0973117 5.7572633 8.2110370 10.2421977 6.5851804 4.0271806 8.8668885 5.2146105 11.0073697 10.0371689 9.2678625 10.1548313 8.8938260 6.1426626 10.1449722 10.7852494 10.8091690 9.3723965 10.5487541 8.1817620 -0.9500905 8.9132006 7.7134628 6.7399034 10.9547276 6.3808212 10.7047647 10.0088201 7.0915644 13.9028001 10.6892456 10.4529169 12.2629332 9.4513179 9.5210719 1.0499095 TCGA-C8-A1HJ 53 0 NA 5 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.601772e-06 7.284961e-07 11.446911 6.200249 7.213925 10.427785 -1.514161 9.557466 0.486045 9.323632 10.988587 6.318893 10.390262 8.013481 7.748099 11.245060 7.803417 7.985850 8.468997 12.054435 9.548050 4.416738 10.019820 10.743392 13.452464 10.668709 11.166364 10.905701 5.267364 9.758051 4.213923 1.293370 7.949529 12.292554 12.308376 9.363288 9.018360 12.254499 8.746923 8.023223 3.240894 7.695457 9.532446 7.568153 9.621713 5.762128 NA 11.485299 7.176002 6.685677 10.088536 10.714221 7.082194 6.362521 -1.514161 12.033496 6.766775 3.293356 8.490224 NA 4.733929 9.601048 10.629706 9.346315 7.460418 10.581401 9.562820 9.878858 10.326782 9.841906 1.655947 7.048246 1.945420 10.102553 14.207904 7.974567 10.292151 10.450706 10.591585 3.186437 -1.514161 9.473268 9.596487 11.576447 NA 6.100715 6.766775 11.436195 11.297178 4.733929 5.985851 2.485993 10.077059 12.926224 1.485993 13.424527 4.530395 7.839151 11.661865 11.485299 13.495745 7.097029 10.179491 11.336777 10.500739 10.797185 4.062830 8.250875 12.045501 10.945948 2.186437 9.694238 10.478588 2.655924 4.399609 9.762710 8.777175 11.107140 9.483184 14.903181 10.689352 9.576778 7.541286 -1.514161 12.263978 5.025162 12.333061 13.097778 10.143769 9.866465 7.710006 9.380344 0.02011400 0.61016000 0.00504780 -0.69248000 0.70858000 -0.67854000 0.03008000 0.65781000 0.05713500 0.02754900 0.02754900 0.71690000 0.65118000 -0.70869000 -0.69944000 -0.72240000 0.00254770 3.22280000 -0.67248000 0.02726800 -0.70564000 0.75039000 -0.72955000 -0.72955000 -0.01775300 -0.04260300 -0.04260300 -0.07199700 -0.01114700 -0.72850000 0.02011400 -0.72770000 -0.69248000 -0.69447000 -0.68857000 -1.29290000 -0.69881000 0.01913400 0.05713500 0.68782000 0.05956100 -0.73561000 0.00908220 0.03698700 0.04320900 0.04320900 -0.71935000 -0.01197400 0.00338070 -0.73544000 -0.71092000 0.05328900 -0.04460000 -0.04950900 -0.69709000 0.03953000 -0.71271000 0.01955400 -0.72955000 -0.72955000 -0.35608000 -0.71521000 -0.00990590 -0.74182000 -0.01995000 -0.00078086 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.685 0.658 0.658 0.000 0.000 0.000 0.000 0.000 -0.695 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.685 0.658 0.658 0.000 0.000 0.000 0.000 0.000 -0.695 -0.527 7.46328404 11.09125203 5.28041817 8.95564584 2.13563337 12.61190175 2.48599349 5.15842994 8.43728892 8.36405497 3.65592421 8.06407501 6.84794806 12.08207727 9.30538485 3.53039541 8.65091100 11.80779121 9.41081659 9.73511748 8.76387263 6.93308749 10.60494512 NA 7.66839857 9.56281958 4.89539473 NA 10.00268902 0.07093882 13.22351545 12.14187011 9.12624888 9.69606652 10.54196430 11.07214011 6.36252074 1.07093882 0.07093882 -1.51416103 7.93515267 6.24755540 6.20710415 5.28041817 7.75538768 6.11535999 9.81187156 5.75279140 9.95513710 2.87831336 11.95182548 0.07093882 6.23419664 10.66310895 6.61852940 5.86970858 7.27063920 6.11535999 5.78978402 8.09518284 13.73055368 -0.51395501 10.54534852 NA 9.37550801 4.26736350 8.85232632 7.48318375 10.642403 9.193363 7.876173 9.018360 9.987841 11.533469 5.762128 11.822511 9.727987 12.297178 13.407984 12.133013 9.596487 8.820277 4.861042 8.530398 11.143099 10.266954 5.635751 9.254188 9.896455 9.132563 9.257964 3.843552 4.552094 10.668709 12.101289 -0.513955 9.871866 9.432106 11.449984 9.570812 9.804547 7.217323 8.063433 7.144216 9.346315 10.858869 12.165484 10.756007 10.255015 7.847948 NA 8.403257 7.905016 7.097029 11.297178 5.685677 9.840253 10.077059 8.938245 15.091831 10.456110 10.583049 11.624596 11.057994 8.908069 1.945420 TCGA-C8-A1HK NA 0 NA 366 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 109.61.0 NA NA 1 3 NA NA 2 6 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.318231e-06 3.122126e-07 11.9040543037 4.1702856301 8.6369852492 10.8978280649 NA 9.7409847153 0.0004327436 11.0755055563 12.0866628387 3.7552508018 10.3312776188 8.1501077482 8.3535076747 10.4203209118 7.0003606287 8.8799440314 9.9690275658 11.2912435231 6.3222887236 2.7007947994 9.8645469281 9.3007133606 14.9386998132 10.0150786631 8.8125380144 11.4633741188 6.2387658456 9.6369852492 0.0004327436 0.5853471681 8.5219611665 11.4166304524 12.1403916246 6.3222887236 16.9337632304 13.4172242046 6.7214601592 3.8583391370 NA 4.0878277121 8.9675871037 4.8077155507 5.5239225847 13.6954258545 NA 8.8875813203 11.5799123640 2.4597988034 9.1847030520 11.8163443453 7.1141025344 9.5051797652 5.3402097412 12.8705096369 7.4841768088 NA 7.6692457901 -0.9997114898 4.7008003468 10.1108439711 10.6123076166 9.4700025476 10.6981971169 10.6833553001 9.7033990609 2.1702776171 11.6927582822 10.2653896591 1.8077258531 5.7418282891 12.5708094174 10.5380644494 13.7978196058 6.7447907914 10.9061237347 11.9110034341 8.1577076903 NA 5.2098159434 7.0825099362 9.1360701071 11.6914498913 0.5853471681 4.1702856301 6.7008003468 10.0576755403 11.0296479247 4.2857646967 5.7418282891 4.2482919377 9.7560829075 12.4240019025 3.7552508018 13.1970396787 4.1702856301 7.6514126787 11.2697796607 12.9167067310 12.9956862355 5.2291802807 10.2104232032 11.0491881612 10.9886903667 11.0708171620 5.0227273322 9.0583524867 12.2684640447 11.0049323667 NA 9.6269824179 10.1418292160 1.0003606287 2.4584870000 10.1341450700 8.3644953931 8.9369985677 9.4495093772 15.2945686139 10.4145173872 10.3251038235 7.0771767599 0.5853471681 15.1138994233 9.5559085441 13.1213275398 11.1589703800 10.6842326288 9.9019819001 8.3601100792 10.0468094303 -0.3467600 0.6168800 0.6211500 -0.7192800 0.1757300 0.6782700 0.1563600 3.4683000 0.0376410 0.2208300 0.0072217 0.7047600 -0.3290100 0.5945800 -0.2310400 3.6569000 -0.7117600 0.1535200 0.1535200 -0.2371600 -0.2235500 -0.2578700 -0.7362500 3.6569000 0.2899600 -0.7444700 0.1125700 0.1125700 0.0982400 -0.3467600 -0.3467600 -0.3961900 -0.6886200 -1.2394000 -0.2033600 0.1346500 0.1346500 -0.7382700 0.0376410 0.0376410 0.1472600 0.0093098 -1.2453000 -0.3229800 0.0000000 0.4408800 0.1905600 -0.2403400 -0.8138400 -0.2310400 -0.7178200 0.1535200 0.1535200 0.1535200 -1.1574000 -0.2235500 -0.2432600 0.2160600 -0.7362500 -0.7280000 -0.1787900 -0.7444700 0.1125700 0.2122300 -0.6681800 -0.2869100 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 8.1727880123 11.3802805275 4.9072512243 7.8237277095 2.1476648856 12.5946853259 0.0004327436 NA 8.7767939078 6.7282810832 NA 7.9012277384 -0.9997114898 10.6205805458 8.5946851393 1.0003606287 7.7384530572 10.2061539391 11.2542082318 11.7835635904 7.4811915557 8.4536311598 9.8629980637 1.3222743002 7.2857628475 9.7033990609 1.8077258531 -0.9997114898 13.1465315897 1.3222743002 12.1296437422 12.3603847443 7.3490892253 10.0990508240 10.1839960722 9.9384700284 4.8077155507 1.8077258531 0.0004327436 2.8077258531 7.1244821990 6.4012396382 10.6977627013 3.2482919377 8.7159623333 6.3132440375 9.6205805458 6.6150704728 10.5046831515 NA 10.3194683456 1.3222743002 3.6442139338 9.8570819845 6.3394082212 6.5853231294 7.8830036780 7.2949818369 8.7734999178 1.5853471681 13.7279621462 -0.9997114898 10.7919306018 NA 5.8077155507 5.4266270605 9.1501077482 7.2098139943 14.501851 4.357911 10.136711 16.933763 8.459792 11.413195 13.695426 9.171538 8.913250 11.135429 13.005459 6.658573 9.136070 7.229179 2.585323 8.219529 11.691886 1.202481e+01 7.224363e+00 9.208595e+00 1.069733e+01 7.817600e+00 1.166426e+01 4.728280e+00 1.020310e+01 1.001508e+01 8.106269e+00 2.322303e+00 9.766890e+00 8.233093e+00 1.214534e+01 1.072871e+01 5.989046e+00 7.977641e+00 9.028267e+00 7.108885e+00 9.470003e+00 1.088071e+01 1.132623e+01 9.428721e+00 1.131947e+01 8.699065e+00 4.327436e-04 8.624316e+00 1.009798e+01 7.778438e+00 1.102965e+01 5.459792e+00 1.122285e+01 9.756083e+00 7.581712e+00 1.369559e+01 1.038892e+01 1.026656e+01 1.207634e+01 1.112384e+01 9.772675e+00 2.700795e+00 TCGA-C8-A1HL NA 0 NA 317 breast stage iiia t3 n1 m0 2-10-2014 female 2010 NA NA other specify yes NA asian not hispanic or latino 103.51.0 6 1 1 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 11.36245756 5.40372787 7.88537974 10.67051463 0.04614178 10.13562657 NA 9.73180081 10.76556483 10.51480004 9.67735302 8.01196016 9.07822181 10.14289126 8.07408204 9.44063873 9.30238463 11.05530481 7.71860137 2.21611336 10.87470922 9.72301462 14.17372711 10.74574852 9.35792429 11.10145849 4.87906366 10.23846887 0.04614178 0.04614178 8.36358856 11.49403417 12.71227685 7.46824117 14.00672106 13.20652022 8.72036843 3.56973411 NA 5.98869150 8.70795403 9.03911426 7.17029765 13.08586623 NA 11.87192987 13.57499640 -0.95371850 9.55990359 10.21233916 7.72213332 7.41249787 2.21611336 12.83105111 8.57357486 0.63115086 6.40372787 NA 5.09056977 9.06993036 10.09329990 9.30356387 9.25319038 9.69273475 9.33734672 NA 10.72080968 9.45025326 5.04617671 7.38156631 11.36075931 11.37737291 14.02197924 7.69183423 10.46138961 10.97395403 7.36358900 1.36809782 2.85353663 5.94099360 8.84059195 10.04194315 0.04614178 6.84059164 7.17029765 9.89636283 11.55099505 4.92882035 5.84059164 5.50560833 10.74140437 12.43122954 5.52190818 14.22748363 6.57755723 7.40372787 11.79562650 10.35735670 12.49248399 7.09602460 10.65489286 11.12566085 10.73180090 10.52089600 3.85352665 9.61887623 11.86075850 9.00327812 1.63115086 9.96876038 8.79772021 NA 2.36809782 8.83407848 10.89636291 10.13430168 8.80439920 15.46621849 9.82671579 9.49015553 8.64608884 0.04614178 15.05381657 9.01484288 11.83957615 11.06193952 10.25806436 9.62266044 8.06298460 9.56716780 -0.34979000 0.66604000 0.94017000 0.00000000 -0.00318590 -0.36227000 0.00388540 -0.00429290 -0.00429290 -0.33491000 -0.58872000 -0.36303000 0.00263570 0.00861350 0.01084200 0.78331000 -0.73784000 0.00402430 0.00402430 0.00722170 0.03242200 0.39313000 -0.70460000 2.50180000 3.29120000 -0.30334000 -0.33722000 -0.33722000 0.00507580 -0.34979000 -0.34979000 0.00388540 0.00000000 -0.75806000 -0.03135900 0.00388540 0.00388540 -0.00429290 -0.00429290 -0.03299400 0.02286500 0.00332990 -1.20080000 -0.74768000 -0.74768000 -0.00341680 0.06794800 0.00861350 0.01153900 0.01084200 -0.74584000 0.00402430 0.00722170 0.00722170 0.00722170 0.03242200 0.00083195 0.02820000 -0.76467000 -0.69875000 0.00277450 -0.29579000 -0.33722000 0.02946600 0.01516800 -0.78294000 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 0.000 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 0.000 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 8.2409330 12.4313644 5.0003742 9.1715894 2.5797353 11.1435498 0.6311509 NA 8.9620553 7.5930706 NA 8.2574317 0.6311509 10.8131190 9.2482998 2.7466137 7.6198231 9.7247761 5.2749959 10.5137816 8.4634169 7.1857278 11.9708030 2.3680978 8.5756066 9.3373467 1.3680978 -0.9537185 10.1216552 2.7466137 12.6311386 12.4062001 9.0234561 9.7422742 8.1041678 9.5198817 3.8010655 3.7466137 NA 2.7466137 7.4037279 7.6828008 10.9941782 4.4724423 7.8070625 6.4212149 9.6691430 6.5056083 10.1468384 -0.9537185 10.3379223 2.0461767 4.8535316 10.0799431 6.6222451 1.8535167 8.8093884 8.4146827 8.7326766 NA 14.5324140 1.3680978 10.4201287 NA 8.9709885 6.9349198 8.3035639 9.0134022 13.235388 7.322300 8.587273 14.006721 10.588724 10.768130 13.085866 12.749214 8.226085 10.207938 13.207702 8.700812 8.840592 10.009072 3.438492 9.560890 11.780251 10.745315 4.538991 9.136289 8.553971 8.203801 10.937208 4.472442 9.931110 10.745749 5.891667 NA 6.953066 8.424970 10.852323 10.433116 7.029170 9.355652 9.530999 4.255629 9.303564 10.624077 10.873122 10.061591 10.347101 7.791010 NA 9.101309 6.884309 3.569734 11.550995 7.767275 10.357357 10.741404 7.416863 13.937912 10.543529 10.195288 11.512253 10.568758 9.734426 3.569734 TCGA-C8-A1HM 74 0 NA 70 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 103.51.0 7 3 4 3 NA NA 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 7.770625e-06 1.734514e-06 11.7653112 3.4449585 7.5543855 10.6052621 NA 9.5461857 -1.0785637 9.1716885 11.2890779 8.9270146 9.5360999 7.5287206 9.2228864 9.4420088 5.3137066 9.8690271 8.8312832 10.9058086 7.3094072 6.5796011 9.9955316 8.6183576 14.0088530 12.0476106 9.8327821 10.9603091 8.4527717 10.9968693 NA NA 8.7979072 9.8417430 13.1803242 8.8712168 12.0917847 12.5759143 8.1478022 6.1112150 3.3137102 7.4950371 7.9657843 9.2877124 6.0711362 12.7710885 0.9213602 9.7303543 13.6175970 5.2251708 9.3094075 11.2339895 8.5305690 5.1502103 -1.0785637 15.0629657 10.4137241 0.5063988 8.0246782 NA 4.9437573 10.9015298 11.1858328 9.6148771 11.8642712 10.4122410 9.2877124 2.0913275 10.4566655 10.1204490 5.6356354 8.3307811 1.2433035 10.7609877 13.6673270 8.3811700 10.9329668 11.4515526 11.5282580 1.9213982 3.6762787 8.6304739 9.8078488 9.8025041 NA 3.0913106 7.8462024 10.2606834 8.8972380 4.9213887 8.7871236 5.9437573 11.0121642 12.4744194 3.2433187 13.0408177 6.6895745 7.7793714 10.3523654 11.3217360 12.9442781 7.1357093 10.2263119 10.0526040 9.8565552 10.6488852 5.5938169 8.8101333 13.9362824 8.9780280 NA 10.8387622 10.1173775 0.9213602 2.9249930 9.1986776 11.7633476 10.3581017 9.7645261 15.0490621 10.3808217 10.6866763 8.0837814 3.1693157 15.3019358 4.7542782 12.3413503 10.3429290 10.1044052 8.7871236 9.2010008 10.4263730 0.0019418 0.9473100 0.7113300 0.3482700 0.5743400 -0.2398500 0.4616100 0.1936000 0.4251900 0.6860800 0.3106500 0.9277700 -0.2784700 1.3789000 0.0742650 3.6225000 -0.0158790 0.5805900 -0.0096806 -0.1321100 -0.2184900 0.2316300 -0.2841800 0.1026400 1.4169000 -0.2929600 0.1764800 0.8259600 1.0009000 -0.2383800 0.0019418 -0.5075300 -0.1515700 -0.2437500 -0.7647500 0.1319900 -0.2477600 0.1936000 0.3974500 0.4094400 0.2151400 -0.2698500 -0.3916300 -0.2538200 -0.5051500 -0.0178030 -0.0178030 -0.7969500 -0.7788800 0.0742650 -0.0176660 0.5805900 -0.0153290 -0.0153290 -0.0419740 -0.2436300 -0.2435000 -0.1187400 -0.2841800 0.1026400 -0.4967300 -0.3918500 0.1764800 0.1993800 0.4944100 -0.2637200 0.301 0.301 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.274 -0.110 -0.182 0.103 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.311 -0.236 0.000 0.000 0.301 0.301 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.274 -0.110 -0.182 0.103 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.311 -0.236 0.000 0.000 9.2444449 11.1571052 7.7158062 8.7917548 5.0804530 10.5728904 3.1693157 NA 8.4132433 8.2833338 NA 5.7917542 2.3808126 11.2399330 9.0634973 3.2433187 7.3137075 9.1870051 10.5438996 10.1459948 9.2009194 8.1597947 9.5287206 3.0913106 7.0194217 9.2877124 1.7287477 NA 10.9291183 0.9213602 12.4057096 12.5024730 6.9157432 10.2044785 11.7200644 9.7052069 3.9657843 3.0088454 NA 4.0506758 8.1597947 8.4011705 10.2556635 1.2433035 8.2420327 6.7287450 10.2877124 4.1308403 9.8922151 NA 9.8929338 3.3808264 3.4449585 9.1623843 6.4541742 6.7287450 9.2399331 9.1161469 8.8550809 0.5063988 13.9259618 2.3808126 10.3466060 NA 9.5370197 3.1693157 9.1716885 8.0272989 14.47273855 6.92701464 8.06094176 12.09178471 10.05067324 11.02106672 12.77108846 11.65270921 9.44004338 11.41474527 13.75180634 10.21140906 9.80784883 8.50070607 -0.07856367 9.47597899 11.70520695 10.482201 6.460549 9.096316 8.595582 10.179367 10.036356 8.190517 7.456666 12.047611 8.000875 -1.078564 9.830533 9.957426 7.927015 10.652285 9.109979 8.931219 12.221886 8.236539 9.614877 10.580940 11.138439 9.677112 10.906165 8.590275 6.614878 9.176112 7.666224 8.272329 8.897238 4.206792 10.496457 11.012164 8.216011 13.046965 10.475979 10.745155 12.883292 9.495984 9.133278 3.779375 TCGA-C8-A1HN 56 0 NA 99 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 103.51.0 3 1 1 3 NA NA 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 8.065304e-07 2.781139e-07 10.61759281 3.12209287 7.89469046 11.01416090 NA 9.82464106 0.07765319 9.91691085 11.51402814 8.29929412 9.81664370 6.65513569 7.47431192 8.80477670 6.31611134 9.49450462 10.29505889 10.60273830 7.20698991 0.39966330 10.37462318 9.81748768 13.76786870 11.20940322 9.90663675 10.45708533 3.85906510 11.37891738 -1.92248353 0.07765319 7.21213351 10.60396167 12.40771349 8.71251806 13.30366752 12.84029666 9.32682044 4.36310798 1.98458935 7.98609972 8.48497471 8.31849852 6.82590008 13.06683534 4.38149104 9.67249818 14.17898510 -1.92248353 9.27932248 11.80743394 8.63803980 7.78506595 1.07772154 12.73810185 8.54633116 -1.92248353 7.63037635 0.07765319 2.72156953 9.78937404 10.16218322 9.56303321 9.97252480 10.17343367 8.87779792 0.39966330 11.39554351 9.61395426 5.54531357 6.30652656 0.88502764 10.38405359 14.13523341 8.04216332 10.58475829 11.67284788 7.80392509 1.07772154 4.47002269 6.23757901 8.91927125 9.58599700 -0.92221011 6.54938270 7.68873148 10.53097764 10.21277493 4.75013482 6.27246370 4.91059836 10.18623151 12.15151385 -0.33733874 13.70150276 6.89788538 8.60420627 10.52814503 13.11936615 12.89108738 7.85742620 10.04889129 11.21661874 10.53566750 10.74946915 4.50397199 8.28105511 12.19697237 10.67808458 NA 10.37834558 8.89868361 -0.92221011 2.33018549 8.76508284 10.78312340 9.98347007 10.25512656 15.51004499 11.07770699 11.54658554 8.67389664 4.80562781 15.69114397 7.39511937 13.07581256 10.44757692 10.17079436 8.61103660 8.48921817 10.09493645 -0.0494520 0.4775200 0.4728200 0.0866370 0.4223200 2.8746000 0.0516430 -0.0138430 0.0048876 2.1190000 0.1001300 1.6358000 0.0273280 -0.4722800 -0.4786200 0.0274240 0.0274240 -0.1911400 3.6569000 -0.4848400 0.0233410 0.5155600 -0.4257300 0.5187000 0.9554500 -0.3786700 0.1087400 0.7993300 3.6569000 -0.0603920 -0.0494520 -0.0040444 0.0408560 0.5046000 0.4696000 -0.0342500 -0.0290660 -0.0138430 -0.0138430 0.0294370 0.0281720 0.3818500 -1.0696000 0.4423700 -0.0391490 -0.4920600 0.1626200 -0.4722800 -0.3929900 -0.4476200 0.0321000 -0.2167900 0.0154190 0.0528480 -0.4789400 -0.4668800 -0.1411900 -0.7548800 -0.4257300 0.0417120 0.1109000 -0.3786700 0.1087400 -0.9789200 -0.3060400 -0.4012900 -0.472 -0.472 -0.448 -0.448 0.000 0.000 -0.479 -0.467 -0.123 1.014 -0.423 0.093 0.519 -0.389 0.111 -0.270 0.109 0.000 0.452 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 -0.472 -0.472 -0.448 -0.448 0.000 0.000 -0.479 -0.467 -0.123 1.014 -0.423 0.093 0.519 -0.389 0.111 -0.270 0.109 0.000 0.452 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 7.51441819 12.10154795 6.79880615 8.52479008 -0.56618592 10.47831965 0.39966330 NA 8.50606713 6.68503748 NA 6.48493243 1.98458935 11.56391353 9.04132568 4.56955793 5.49556086 9.88948297 5.55344038 10.06816561 9.96334999 7.74836328 10.66407772 3.32563106 9.03408308 8.87779792 2.32564545 -1.92248353 10.78204295 2.98458935 12.80541478 12.10992495 7.21725786 10.22618361 8.46464703 9.65890749 2.66266126 0.07765319 -0.33733874 6.74659225 8.90187031 9.25948035 10.90723154 3.50397199 9.38458886 5.80562781 10.25885925 4.84589144 9.78204303 NA 11.86448711 0.88502764 4.26752831 10.36366981 6.85506156 1.66266126 8.37576972 7.25013448 5.07770872 NA 13.67950679 0.07765319 10.42117038 0.66266126 7.39285662 3.77814548 9.54174210 8.06922902 13.8717847 7.1384029 9.4581681 13.3036675 9.7403753 10.9534564 13.0668353 14.1617472 8.6841122 10.1777122 12.2425354 10.7242657 8.9192712 8.2798306 -0.3373387 8.6560798 13.5450578 10.12346665 6.71795191 9.83259448 8.96264069 9.88586671 10.58822891 6.32563466 8.58451046 11.20940322 6.87536847 0.66266126 8.68133330 8.58685855 9.02826276 9.50344733 8.85578419 8.96721098 9.95575785 3.39963596 9.56303321 10.25294460 11.09538535 8.64280913 9.98947341 8.89948110 5.25761790 9.17401360 6.74931838 2.53714694 10.21277493 6.26258161 11.01195073 10.18623151 7.08052230 13.42231498 10.64542544 10.87698858 11.47163366 9.73189548 10.21020668 0.07765319 TCGA-C8-A1HO 34 0 NA 0 breast stage iiic t3 n3 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.946798e-07 12.3098803 3.8880808 6.2456307 11.2762751 -0.6968914 10.9568567 0.8880711 10.2122590 12.2380046 10.4991032 9.5954375 8.3759183 9.0779031 9.5704878 6.2918006 8.4477742 10.9092898 9.9869878 6.2918006 0.8880711 10.2681787 9.0630040 14.2752431 8.7367013 9.5605038 11.0485802 4.4730400 9.9447162 -0.6968914 -0.6968914 6.7293801 12.3845161 14.3977503 6.6114542 10.8593824 13.3279093 8.0795488 6.5792405 3.7625508 7.7969715 8.9415518 8.6683447 6.6518439 13.4820919 2.1104635 8.6440787 15.5903233 NA 9.1757908 11.7989709 6.9215018 10.4576176 1.3031086 15.4393764 7.1826992 0.3031086 7.8009678 NA 3.6954371 10.8056991 10.1204993 9.1080537 10.5643294 9.6830357 9.6759810 6.4780415 12.0192923 10.0848854 5.2219776 6.6562632 -1.6966576 11.3089159 13.7252135 8.6148640 11.1725170 10.5058519 8.1811667 -1.6966576 7.0000834 6.8577049 9.0630040 10.7538117 -1.6966576 6.2918006 7.7645956 10.4077146 11.1365990 7.9196648 4.9469741 3.2099991 9.6991855 12.2470043 6.4680228 13.4271564 7.3665111 7.6562625 11.7083904 10.2511181 12.9414953 6.1979342 9.7630598 11.1214984 12.0280965 11.4320769 4.7293787 7.6137283 12.0515184 12.0087483 NA 10.1284723 9.9626658 -0.1118510 3.7303900 10.0991555 10.5295281 10.4050916 8.9333829 15.1680275 10.9315615 11.1182990 8.2960545 2.8266807 15.8984025 8.9169053 10.9349750 9.9750992 10.5373346 9.0293342 8.2974693 10.4380620 0.00541390 0.00541390 0.00541390 0.00110930 0.00110930 0.48775000 0.01293400 0.72754000 -0.77769000 3.65690000 2.99640000 0.76989000 -0.00360110 -0.00940160 0.01530800 0.81630000 -0.76458000 0.04230700 2.08800000 0.04996600 0.01488800 -0.00332430 -0.78420000 -0.77150000 3.65690000 0.00000000 0.00000000 0.00000000 0.04443200 -0.00705760 0.00541390 -0.00636680 0.00110930 0.48775000 0.54683000 0.01293400 0.01293400 0.72754000 -0.77769000 -0.80527000 -0.00373950 -0.00373950 -0.84923000 -0.01003000 -0.01003000 -0.01003000 -0.00138580 -0.00940160 -0.02463700 0.03157700 -0.81013000 0.04230700 -0.73565000 -0.73565000 -0.75030000 0.01488800 -0.00332430 -0.00636680 -0.78420000 -0.77150000 -0.79336000 0.00000000 0.00000000 0.04443200 -0.00013862 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 -0.531 7.2009614 10.7874353 8.2717828 8.8615367 0.4439249 12.1663342 -0.6968914 NA 8.3488755 6.3583980 NA 6.3031159 -1.6966576 10.5259108 9.0605060 -0.6968914 7.7768219 9.3392895 9.0044225 10.1895747 10.0826178 8.4129466 10.0596722 2.3031086 9.7671511 9.6759810 1.8880711 -1.6966576 10.2017173 3.8266807 12.0768733 12.3032920 7.3958734 8.8871390 12.6010352 9.4792890 6.4272374 2.1104635 -0.6968914 5.8109109 9.0052885 7.2514834 11.5359865 3.2573124 9.6730949 5.6868198 9.7193856 4.0844725 9.6306685 NA 10.8504925 3.9178232 8.7501991 9.8829126 7.5553323 5.1857595 9.2360687 8.2485600 8.3745783 NA 13.6603586 NA 11.1926198 NA 7.4401067 5.4929395 8.6529500 7.5557817 13.9432261 5.9030286 9.4142516 10.8593824 10.8842671 9.8667889 13.4820919 13.5925585 8.3624602 10.8158564 12.3768391 11.4637752 9.0630040 7.6824939 0.3031086 9.6911332 11.3899156 11.4978727 7.1517391 9.2301530 9.4464992 8.1360057 10.7788518 4.3031159 9.5885181 8.7367013 7.0975318 0.6250834 4.4528656 9.1028751 9.0225049 9.7834012 8.7919602 9.5064639 12.1338292 5.1857595 9.1080537 11.5688774 10.8225065 8.0496302 10.9295094 8.6835768 6.9577521 8.3874991 6.2746586 6.0580025 11.1365990 6.7584431 11.2362533 9.6991855 7.7522642 13.7438229 10.7846631 9.5862042 11.3353339 9.7574152 9.7999696 1.3031086 TCGA-C8-A26V 47 0 NA 9 breast stage iiia t3 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 2 3 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.873276e-06 5.550446e-07 11.3730428 0.8332544 7.8332778 11.3346178 -2.1668265 10.0986001 NA 10.1695057 11.8452042 10.9327903 10.2378875 7.9140957 8.3211182 9.6873673 7.7918310 9.9667415 9.9447399 9.1747969 7.2126569 3.4771333 9.9744274 9.5894175 12.7558625 10.5293763 9.1146286 10.2413424 4.8776706 10.0399598 NA -2.1668265 7.1731284 12.4089355 12.8788245 9.2094034 11.3315041 13.0601042 9.1869764 7.4699031 4.6014648 6.7787224 8.4662735 8.9830252 7.2083173 12.7145355 1.1552311 9.4479880 14.2923735 6.0906650 9.2363859 10.4222269 6.8749371 6.7250622 -0.1666646 15.4063656 9.6943650 -0.1666646 7.4238655 -1.1668265 3.6146392 9.9306519 10.7420460 9.7001706 11.4260855 10.5462350 9.6244411 -0.1666646 11.4173011 9.7303672 6.8912697 8.5637485 1.5337128 10.3346178 14.7974723 7.9943597 11.0798703 11.4440723 8.5136376 -0.5818640 -1.1668265 8.9194143 9.3931332 12.2212954 NA 4.6912606 7.6390223 9.4735231 10.9601439 5.7097952 5.6406325 4.4031314 9.7983409 11.7784476 2.3568481 12.7750135 5.1731274 6.1278994 11.4501715 12.6951889 13.0891550 9.0038290 11.1542196 11.3138159 10.6408383 11.0086718 5.0812075 8.8325736 13.5447300 11.0103861 -0.5818640 10.3878670 9.0536566 0.8332544 2.3018510 10.4955014 9.9776177 9.0421220 9.8041031 15.4940192 9.9020564 10.0707868 7.4986139 2.0032064 15.5892219 8.7013290 12.8033391 11.3112893 10.2330901 9.0584856 8.7558627 10.0095199 0.0165650 0.0165650 0.6871900 -0.7178200 0.6995100 -0.0297210 0.0000000 0.0026357 0.0533790 0.0143300 0.0143300 0.0143300 0.0154470 -0.7021700 0.0207630 0.0196700 0.0196700 -0.0473120 0.0122370 -0.7050500 0.0055529 0.0223040 0.0102850 -0.6936900 0.0135630 -0.0478010 -0.0478010 -0.0478010 0.0256710 0.0165650 0.0165650 -0.0091286 -0.7178200 -0.0791770 0.6215400 0.0000000 0.0000000 0.0026357 0.0533790 0.1055500 0.0125160 0.0125160 -0.0689420 -0.4039500 -0.4039500 -0.0069195 -0.0069195 -0.7059400 -0.7059400 -0.0023026 -0.0313590 -0.0473120 0.0122370 0.0122370 -0.7050500 -0.7024400 0.0223040 -0.7096200 -0.7081800 -0.6936900 0.0086135 0.0148780 -0.0478010 0.0256710 -0.0274110 0.0338310 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 7.5964902 12.0680956 8.5611986 8.6138178 1.2927229 10.8780137 0.4182439 -2.1668265 8.4699027 9.7386652 -2.1668265 7.5162729 5.3251309 11.0175336 9.2389514 3.3878726 6.6406325 8.7090276 8.6873673 9.7885648 9.6423629 8.0941975 10.8785259 0.4301782 7.0006964 9.6244411 1.0031704 -2.1668265 10.1018201 2.3568481 12.2810071 12.5307887 7.8076930 9.8660127 10.2658200 9.7044133 3.6406325 -0.5818640 -0.5818640 5.5197778 8.8076927 9.2673850 10.6303317 0.6406209 10.0180388 6.0329516 9.6815099 9.0770472 9.5462349 -1.1668265 10.7155391 2.5881569 3.8332747 9.8094054 5.9943602 2.9207316 10.5791625 6.7932795 5.3251309 4.0231045 13.7095313 -2.1668265 9.9440877 NA 8.9925189 2.7401720 8.2865490 8.4598996 12.984549 6.772857 9.289119 11.331504 9.510557 11.653657 12.714536 11.375464 9.686588 10.968827 12.637308 8.540637 9.393133 9.363684 NA 7.420118 11.168250 11.0220215 7.4866782 9.3054612 8.6276940 8.1404791 9.8291300 6.1416167 7.1529500 10.5293763 8.2605907 6.6276944 5.4257346 6.9621487 12.3278213 10.5937902 6.4950555 8.3830627 12.5172596 4.1370608 9.7001706 9.8385518 11.3672161 9.7834694 11.0047677 9.7090274 0.8332544 9.6881893 8.9383617 3.6661658 10.9601439 8.1597074 10.5569391 9.7983409 7.9100934 13.0768214 10.9331190 11.1360599 12.7319740 10.5432236 9.4064518 -1.1668265 TCGA-C8-A26W 58 0 NA 7 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 4 2 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.21416e-06 4.162835e-07 11.1160799 7.3812237 7.8759103 11.3712538 -0.8452872 10.3452531 -1.8452872 9.4373203 11.0051933 10.2362944 9.8556842 7.6881405 8.2724544 9.3501832 8.3222292 9.0825890 9.1090074 10.1097343 7.4789912 2.6142387 10.4192537 9.2782859 13.0641417 11.5791086 9.2607196 10.4054056 7.4631500 10.9488146 0.1548424 1.4767446 8.3247359 11.4399243 12.9337609 6.6264859 14.2392250 12.3389891 8.6060220 6.6705104 3.6783762 6.3495687 8.3483364 12.4664884 8.1133640 12.6240713 0.1548424 10.0851788 13.9762861 7.7584371 9.5558558 10.9394459 5.8272373 7.1632401 2.3247242 14.4333037 9.2336290 0.1548424 7.6183356 -0.8452872 4.8827311 9.4963299 10.5977545 9.9258877 9.9557109 9.9101159 10.2452544 2.4767446 11.0496289 10.0351599 6.7914351 7.3979852 6.5428276 10.7884874 14.6033468 7.8791035 10.7072401 11.8753760 8.5035392 2.9621603 2.4027495 7.5514160 9.4896431 11.9542951 -1.8452872 5.5035396 7.4169056 10.5742446 10.6429023 8.8272363 6.9781785 5.2943634 11.0931042 12.0674198 2.0617071 13.2646009 5.9163620 7.1148126 11.6881408 12.6545324 12.3066204 7.8094472 9.7491357 11.0452653 10.4140777 10.5333768 3.9877029 8.6556531 11.9969650 11.2528432 2.5471290 10.5980137 9.2262735 2.3247242 4.0172627 9.9657843 10.6839975 10.2669247 9.5205867 15.2903200 9.3575472 10.0259462 9.5417514 4.9492268 15.2911914 8.9171930 12.4533749 12.4016259 9.6915439 10.1006207 7.9063549 9.5995878 0.0095883 0.0095883 -0.0074720 -0.6036100 0.5877500 0.5802300 0.0844980 0.0175440 0.0029133 -0.0918160 -0.6070900 0.2872300 0.0252500 3.4404000 0.0593660 3.6569000 -0.5940000 0.0095883 0.0036738 -0.0994870 0.0279190 -0.0694660 -0.6189200 3.3647000 -0.5922100 -0.0012473 -0.0393940 0.4722100 0.0161460 -0.6214000 0.0095883 -0.5384500 -0.6036100 0.0027745 -0.2459400 -0.5427000 -0.4897400 0.0175440 0.0029133 0.0147490 0.0137720 0.0282000 -0.6451400 -0.0047079 -0.0047079 -0.0047079 -0.0047079 -0.5941900 -0.1597500 0.0593660 -0.5940000 0.0095883 0.0036738 0.0036738 -0.0902290 0.0279190 -0.0694660 -0.6096000 -0.6189200 -0.5888200 -0.0167040 0.0023731 -0.0393940 0.0111210 -1.2214000 0.0277780 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 9.4471326 12.6058934 7.4145542 10.0500076 5.1401979 11.0632037 3.2422671 -0.8452872 8.5363541 7.2019347 -1.8452872 7.5248880 1.8552323 11.3039231 9.3241096 4.9096963 9.1667370 9.1399414 8.1477493 9.6968756 9.7005236 7.9063549 10.3645690 3.8552522 7.6566480 10.2452544 3.3247386 -0.2601519 9.8737720 3.1090095 12.1834942 11.8978573 7.9394458 10.0469743 10.6563995 9.5904813 4.5123660 0.7397617 -1.8452872 2.7397833 8.8810292 9.5604844 10.9412849 5.3544839 8.4891290 6.9813595 9.8081039 6.3247368 8.9320665 NA 10.1345936 3.0617071 4.2633349 10.0582938 6.7694835 6.2737527 8.8996448 7.8535160 7.4448302 -0.2601519 13.6497604 1.4767446 10.1381609 NA 7.8569838 5.1548100 8.2422738 8.9693934 15.449784 6.622416 9.127791 14.239225 10.468828 10.405702 12.624071 11.418227 8.555018 10.444542 12.737953 9.623435 9.489643 9.644157 3.154810 7.146332 11.023441 11.339067 6.892903 9.300743 9.316573 8.698810 10.844534 7.853516 8.185478 11.579109 8.048112 1.324753 5.638627 8.430598 9.690572 10.386332 6.339686 9.221573 10.227948 7.223590 9.925888 10.831870 11.026139 9.543367 10.624961 8.200571 3.678376 9.221116 7.431145 7.447133 10.642902 6.630544 10.793842 11.093104 7.688355 13.801679 10.000301 10.244593 12.142164 11.347720 9.564732 1.324753 TCGA-C8-A26X 58 0 NA 11 breast stage iia t1 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 2 3 NA NA 2 6 2 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.899646e-07 1.39057e-07 11.9019326 6.7785253 5.0069398 10.4105015 0.8776657 9.4235885 NA 8.8635005 11.1505799 7.3574385 9.4997104 6.5500834 7.2352110 10.9740443 5.4775705 9.8769540 9.1791547 10.0937981 7.9220527 7.6688212 9.7671625 11.3972948 13.5666191 10.3221559 9.3452642 10.3544048 8.2352106 9.6342150 0.8776657 0.4625759 8.8245648 10.4640293 12.3665029 7.7541753 13.7176989 10.9614703 10.6317109 5.5215156 2.9651193 6.4701154 8.9124577 5.4322479 6.4701154 12.0939497 0.4625759 11.4173021 10.0223169 1.8776657 9.3765079 11.9619687 7.0324767 8.6392097 2.1995938 14.8816047 10.7464812 -1.1224913 8.8620769 -0.1223343 8.1421014 9.4905270 10.1415147 9.2319080 9.9644583 9.9604729 10.0754896 1.4626282 10.5269148 10.0761037 5.0274062 8.3493339 0.4625759 10.0889386 14.9274646 6.2890008 10.9230770 10.2991975 9.7557095 2.1995938 5.2526995 7.4663734 11.9031442 12.1909668 NA 6.8318544 7.1303245 9.1124760 11.3200838 5.8318544 7.8520731 6.8832836 9.8937704 11.8820547 -0.1223343 13.9120277 3.9220551 6.7480237 11.7732339 14.6663260 12.5273639 6.4849888 9.9376790 10.4206904 9.8923765 10.6454292 4.3370902 9.2731928 10.5667830 9.2241722 -0.1223343 10.3355525 9.3933585 1.8776657 1.0476082 9.7270638 10.6986353 9.6013195 8.7694422 15.7252054 9.1279569 9.5509676 6.9861834 3.5215156 14.5503602 9.4168174 13.0415441 12.8852991 9.2352106 9.1208325 7.8142966 9.7763129 -0.1072300 0.2813700 0.2813700 0.0994330 0.0820430 -0.1097200 -0.2834600 -0.1105100 -0.3226300 -0.3096800 0.1000200 0.3398200 0.2850100 -0.1013900 -0.2662500 0.0000000 0.0000000 0.0840650 0.0840650 -0.2934300 -0.2341000 0.2873900 -0.3380200 1.0295000 0.4561500 0.0688080 -0.4786800 -0.2128000 -0.0737430 -0.1010500 -0.1072300 0.1049700 0.0994330 -0.0971000 -0.1031600 -0.3035700 -0.3035700 -0.1105100 -0.3226300 0.3028200 0.4975300 -0.1043400 -0.3096800 -0.0989450 0.0016642 -0.3088600 -0.3088600 -0.1013900 -0.0730760 -0.2710900 -0.3069000 0.0840650 0.0840650 0.0966700 -0.2934300 0.1064300 0.2596500 -0.3056900 -0.3060400 -0.3208900 -0.2850100 0.0672320 -0.2128000 -0.0737430 0.0795910 0.0994330 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 10.0056529 12.7055967 2.0475733 9.1172571 5.6860438 10.8054365 1.4626282 -1.1224913 8.4090400 8.3992591 NA 8.0500859 3.4626151 11.2480736 9.5491996 NA 9.6858184 8.6021725 9.1100795 10.1549460 10.2674942 6.5571389 13.0375299 2.3370831 7.4051355 10.0754896 5.0871106 NA 10.1797263 2.7845459 13.3372183 13.2639927 8.5798314 10.2896992 9.3226734 9.9604729 7.2955109 4.7356413 NA -0.1223343 9.8024711 10.1196418 9.2040881 4.1995860 9.5824527 8.2505235 10.3473005 6.6123687 8.7845491 NA 12.4769903 3.4012209 4.7356413 9.4436079 7.6193617 9.9591420 9.9717362 9.3894113 11.6497669 5.5641586 14.0993967 0.8776657 10.5015401 NA 8.1653708 5.4626217 7.9940026 9.2208443 11.488222 6.353392 9.408065 13.717699 10.037530 11.359962 12.093950 8.906946 8.917948 10.256495 13.008792 10.094404 11.903144 10.652034 1.684998 8.050086 11.272121 10.420690 6.814297 9.372514 7.860652 7.863501 8.894105 7.581562 7.243980 10.322156 8.975691 2.877666 4.550082 8.146785 10.694642 10.422623 8.857798 8.410988 8.598758 10.301300 9.231908 10.817972 10.737193 9.879770 9.934973 7.766402 6.345263 9.190213 8.534906 10.512016 11.320084 6.980946 11.431768 9.893770 7.181440 14.035041 10.705398 10.657378 12.296302 10.999192 8.615751 5.564159 TCGA-C8-A26Y 90 0 NA 13 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 2 1 NA NA 2 6 2 2 5 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.717169e-05 4.78726e-06 11.0686266 1.2913678 6.5997106 10.2560731 -0.7086322 10.5458094 1.0987564 9.1218865 11.7646965 7.2857249 9.6149892 6.0727318 8.6053880 9.4296432 5.8612259 10.7772006 11.0006705 10.4225852 8.3933471 4.2455641 11.0522991 11.0680100 13.4679341 10.4357109 9.4219419 10.4099879 5.6042552 10.5836929 -0.7086322 4.5581574 8.5213916 10.5410773 12.5369240 6.1982623 12.1789727 12.5744597 9.4922698 6.8382660 4.2455641 5.2913715 8.2757898 10.0882220 5.5297772 13.0348383 2.0987227 10.8203137 10.4916569 7.1242609 9.6301076 10.0374657 9.9338743 9.8602775 2.3788445 14.0019894 9.1663527 2.8149400 8.1274218 NA 3.5767761 10.1736323 9.7400038 9.7018226 9.8645451 9.2499241 10.0841616 5.4612961 10.9653428 9.9835509 7.0792736 8.4750066 5.3574605 7.4787235 14.4634276 8.3490516 10.7366449 11.2391908 8.5744596 1.8763303 3.5392953 8.0073334 9.0395642 12.4798829 -1.7083964 5.5105411 7.6598775 10.1540087 9.6099141 3.7176380 7.4051134 4.8305292 8.1617361 11.8618200 4.9207268 13.5970412 7.0890330 7.6555057 11.6681750 14.6233029 12.9479079 8.6042541 9.0260810 10.2473844 9.5062975 10.9205002 5.0462597 8.1210942 12.9356219 7.4687910 2.1982741 11.0143923 9.0603825 3.5392953 3.1273031 10.2020141 11.2109795 11.0058315 9.3060893 15.5577919 10.2038864 9.2679353 8.7991660 2.9352334 14.8277400 5.0056156 13.0386202 11.8949976 10.2711537 9.2087433 8.2899617 10.4648235 0.8149300 0.8180600 -0.0633010 0.0162860 0.7337900 0.3833700 -0.0552290 0.0000000 -0.3553300 0.0062481 0.0062481 0.0413170 0.0234280 -0.3536200 -0.3468700 -0.3468700 -0.3468700 -0.4066100 -0.3339900 0.6077400 -0.3260000 -0.3687300 -0.3507600 0.0301690 0.0301690 -0.3273600 0.2113100 0.0168450 0.7684900 0.0579390 0.0349590 0.3145000 0.7117000 0.3626400 -0.4294200 -0.0638380 -0.2172600 0.0000000 -0.3553300 -0.3553300 -0.3849300 0.2155700 -0.0216470 -0.3445800 -0.3382500 0.2211300 0.2753700 0.0088920 -0.4053900 -0.3469800 -0.3468700 -0.4066100 -0.3397500 -0.3506500 -0.2070900 -0.3409000 -0.3635200 -0.3499600 -0.3507600 0.0301690 -0.6371900 -0.3120200 -0.3324800 0.0225850 0.3603500 -0.7554700 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 7.6879761 10.7464416 3.0462640 8.5558139 6.5460687 10.7296433 4.0727318 2.6836965 9.2470213 7.7610133 4.0192927 6.2629142 6.6533152 11.7113315 9.2800560 4.1740148 6.2455679 9.7986704 8.5522910 9.7410358 10.2136026 7.2513735 10.8688001 1.6132959 8.1210942 10.0841616 2.4612928 NA 10.7869765 3.8149298 11.4776403 12.9608654 7.0362055 10.1907282 8.6412053 8.9708514 5.8227531 2.9352334 0.6133431 9.8559972 7.8227525 9.1392116 11.2022014 2.0987227 11.0068807 7.7425823 10.2973467 5.5767730 9.8129718 -0.7086322 11.9136520 0.2913678 4.5201896 9.9501005 8.9477784 4.6133018 7.9883387 6.8763340 5.5201896 11.6363607 12.5630532 -0.7086322 10.7912172 -1.7083964 9.4200101 5.5008244 9.6766944 9.5087232 9.1734410 9.1655841 9.4768663 12.1789727 11.6221229 11.2337025 13.0348383 8.6389926 8.1586501 9.7630465 13.1863311 6.8949972 9.0395642 7.7446421 -0.1235911 7.8188480 12.2105139 11.373687 5.420654 9.960256 8.616677 9.613863 10.265571 6.092271 7.534545 10.435711 9.771152 5.700762 7.711332 8.952927 11.023115 11.829196 8.963797 9.990076 9.506297 5.410314 9.701823 10.067804 10.900088 9.247021 11.206130 7.962028 2.539308 9.177045 5.782021 6.644518 9.609914 5.648923 10.726260 8.161736 7.322038 12.337216 10.771152 10.604254 13.408081 9.862176 10.453448 1.098756 TCGA-C8-A26Z NA 0 NA 252 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 1 2 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.899646e-07 1.39057e-07 12.3356451 4.1432301 6.6181359 11.9712827 -0.7393721 10.1232213 2.0679484 10.1531268 12.2963281 9.2619922 10.0875295 7.3664927 9.3280183 9.5774311 6.6004333 8.3145098 10.2439338 10.3911544 6.9816826 -0.7393721 10.6440182 8.4267470 15.3622314 10.7454068 8.9978312 11.5267848 3.5085174 10.7309759 -0.7393721 -1.7393721 7.2205863 10.2096811 12.6535050 6.5132491 13.5002197 13.7866246 7.9662165 5.6868479 4.3691105 6.7117950 8.4785415 7.3691087 7.2292505 13.5575001 -0.1544096 9.1131134 13.6177235 0.8455101 9.1897756 11.8182869 9.2421511 8.8455465 1.2605677 13.1818782 8.4052423 2.2605978 7.0054180 NA 3.3898696 10.3506964 10.1768366 9.5126579 10.4417362 10.6098651 9.2995029 4.5459869 11.9273627 10.8713781 5.6004333 7.7624212 1.5825078 11.9722509 14.0522556 9.7050759 11.2003467 11.6735506 7.7138546 0.8455101 7.4602560 7.4355094 9.1689764 10.5375807 NA 5.7919651 7.8697629 10.6046023 11.2864156 7.4602560 4.0154708 4.7841480 10.8057897 12.0390718 6.9435780 13.7501810 6.1972226 7.6889440 11.9137649 12.2715490 12.4088221 8.6625299 10.8398998 10.0345473 9.6045857 11.2453584 5.3795239 8.9241421 11.8287776 12.2832985 -1.7393721 10.2735575 9.2995029 2.3480341 3.0240005 9.4983913 10.0488944 10.3619031 9.2198614 15.5199502 10.6897291 10.3697616 8.3872884 1.2605677 16.0789664 7.7841460 11.9722509 9.8166109 10.3596029 9.2549374 9.2711121 10.6027336 -0.5281800 0.9905600 1.0199000 -0.0083761 0.0000000 0.0070826 -0.0019399 -0.0310860 -1.0490000 1.1340000 1.1340000 0.6320700 0.4987400 -0.0263100 1.0228000 2.8511000 -0.5429000 0.4354700 0.4771800 0.0019418 -0.0256210 0.4193200 -0.5476400 0.4668700 0.4668700 -0.5842200 0.9039200 0.9039200 0.4980500 -0.0757450 -0.5281800 -0.5372600 -0.0034250 0.0070826 0.0130740 -0.0167040 -0.0060904 -0.0365380 -1.0490000 -1.1404000 -0.6256000 0.5126300 0.0908650 0.5009600 0.4285600 -0.5618600 0.5039400 -0.0263100 -0.0116110 0.7960700 -0.5429000 -0.0291750 0.4771800 0.4771800 0.0019418 -0.0256210 0.4064300 -0.0887720 -0.6047700 0.4668700 -1.0688000 -0.6180600 0.9039200 -0.2220700 -0.0204120 0.4902700 0.000 0.000 0.000 -0.486 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 -0.138 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.501 -0.061 0.000 0.000 0.000 0.000 -0.486 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 -0.138 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.501 -0.061 0.000 8.4930048 12.8619485 8.2220336 9.3440633 3.3219281 11.0598655 -0.1544096 NA 8.8342312 8.6432079 -1.7393721 7.4641275 0.8455101 9.9365409 8.8045825 3.9330060 7.1371008 9.3239791 8.1629592 10.6260862 10.3303962 8.7723367 9.5620800 1.0679140 8.8853794 9.2995029 1.8455503 4.3898696 10.5091046 3.0154797 11.7767764 11.9665402 8.3898671 10.5811025 7.9259199 10.0308348 6.5779967 -0.7393721 0.8455101 1.7200157 7.3104328 8.1779562 10.6558503 3.0679312 10.4665603 6.1371018 10.2829517 5.1913218 10.4001353 NA 9.1853963 2.5085047 4.4894016 9.9710503 7.0774396 3.5085174 8.0647147 7.5915007 6.7524368 1.2605677 13.5578943 -0.1544096 11.4913549 NA 8.2364319 5.5367088 8.6689137 9.4242335 14.895510 5.822827 8.700415 13.500220 10.322630 10.710506 13.557500 13.218955 8.391155 10.964920 13.061838 10.164842 9.168976 8.563223 1.430499 7.974829 12.867799 10.7403642 7.8417845 8.8132531 9.2780884 9.0411236 10.7645810 4.7200157 9.4273747 10.7454068 7.1853968 0.5825560 4.3266740 8.0467393 10.2839918 9.5694917 8.6657253 9.0129644 10.8358868 4.9330107 9.5126579 10.0558118 10.2549373 9.6153843 10.2524600 9.2619922 -0.7393721 8.6038029 6.4490248 5.0287680 11.2864156 7.7342896 10.9391840 10.8057897 7.4330112 12.7198484 10.4020524 9.9957168 12.8052465 9.8045823 9.9285825 0.2606279 TCGA-C8-A273 NA 0 NA 294 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 asian not hispanic or latino 147.48.0 NA NA 1 2 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 12.0990695 6.3231971 5.9853274 11.4205731 1.4003740 9.7618213 NA 9.5141071 12.1263937 8.1433291 9.2339578 8.0002778 8.6546060 9.4159348 5.7695999 8.7202877 10.3674309 10.1107887 6.8451500 1.4003740 10.2297352 10.6187262 14.6995728 10.5697331 9.1440772 10.8057427 4.7061714 9.8308034 NA 1.5523771 7.4103487 11.8255807 12.6208103 8.8841806 11.8108162 13.1481382 9.4508182 5.9239264 2.8154115 7.5227612 8.0585763 10.9444706 7.5791681 12.4775514 3.0377863 9.4866484 14.8526633 1.9308887 10.0514244 11.1369547 5.1846374 8.6929422 1.0378039 13.1436803 8.1038842 0.8154115 7.4078592 -1.7695510 4.7222911 9.7182799 10.2655826 10.0790627 10.0272906 8.9291445 9.9626073 2.3179118 11.1509788 10.2307920 6.9549535 8.1522808 NA 10.7382345 15.1566084 7.1429403 11.6326525 10.2758582 7.8116406 -0.1845885 3.2304336 7.0183426 9.0593696 11.6008548 NA 5.8814909 7.9886631 9.2084351 11.0027544 7.7441672 5.2857240 4.4003671 10.6122531 11.6431420 3.5879890 12.9402775 6.2857222 6.1130837 11.6658497 12.9856925 12.4232720 9.0649109 10.5841381 10.0996480 9.6495152 10.9957259 3.8451488 9.0158922 11.6538184 8.8396186 -1.7695510 10.6073791 8.8125817 2.1373396 1.9330816 9.4177920 10.8114050 10.0934646 8.6764892 15.7170235 9.8997678 9.5669464 7.1846364 1.5523771 15.4176759 8.6556556 12.7786597 10.3019022 9.7749213 9.4890058 7.5112103 10.5332129 -0.0096806 0.6634600 0.6640100 0.0195030 0.0278590 0.0210430 -0.0128510 0.0000000 -0.7002800 0.6041300 -0.0063668 0.6128100 -0.0040610 -0.0055572 0.0091705 -0.0057128 -0.0057128 -0.0008316 -0.0008316 0.0080567 0.6382800 -0.0179410 -0.0404800 -0.7281800 3.6569000 -0.0877120 -0.0877120 2.4315000 3.4088000 -0.0096806 -0.0096806 0.0133530 -0.6960400 0.0104240 0.0078737 0.0148880 0.0148880 0.0000000 -0.6991100 -0.7002800 0.6242400 0.6177000 -0.6357600 -0.6831400 -0.6831400 -0.0213730 -0.0213730 -0.0055572 -0.0055572 0.0091705 -0.0057128 -0.0008316 -0.0008316 -0.0008316 0.0016642 0.0040243 -0.0179410 -0.0235660 -0.0404800 -0.7281800 -0.6984800 -0.1009400 -0.0877120 -0.0145030 0.0069435 -0.0533410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 8.1433291 13.7257952 5.4202634 9.6339846 1.2554403 10.9800998 0.8154115 0.2304490 9.1522808 6.2965290 -0.7695510 8.1034069 0.5523771 10.9659958 8.9744327 1.0378039 8.9326125 8.9178154 6.7695985 11.2105794 9.7112097 7.7021152 10.4742089 1.9308887 8.7392250 9.9626073 3.5158386 2.5523771 11.4950290 3.2748282 12.8114050 13.1134171 7.6629816 9.4122133 9.6152235 9.8433084 2.6227664 0.8154115 -0.7695510 4.5879890 9.5708464 9.7026229 10.1780767 3.9583601 8.1860607 7.8616167 10.0617470 5.7461408 10.1973057 -0.7695510 9.4978117 1.6898806 3.3597179 10.2107008 6.4328091 3.5523648 10.0207883 7.6795885 10.4640595 -0.1845885 13.4177146 -0.7695510 11.4325636 NA 6.5702899 4.9169400 7.5835868 9.5071459 13.934995 6.815403 8.815402 11.810816 9.832211 10.552368 12.477551 12.495762 8.924798 10.132815 13.297118 9.484878 9.059370 8.472423 1.230449 9.415315 13.030329 10.883733 6.807869 9.111554 7.563595 8.042617 10.503664 5.631320 9.881940 10.569733 6.506564 2.230449 3.689869 9.292587 10.510050 10.162655 9.137330 9.983657 11.428117 4.800294 10.079063 10.325507 10.709715 9.770568 10.684225 9.400365 NA 9.295715 7.106957 5.525060 11.002754 6.400365 10.657415 10.612253 7.525360 13.340026 10.546721 10.272783 11.452480 10.430725 9.308591 1.230449 TCGA-C8-A274 63 0 NA 1 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 3 3 NA NA 1 2 3 1 5 2 0 0 0 0 0 6 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.579118e-06 1.422302e-06 11.0419480 2.6052336 7.9238819 11.4229469 NA 9.9102618 0.1457427 10.0639227 11.7009931 8.4242545 10.2837565 7.7099543 9.4037820 9.3157299 6.5121273 10.0530710 10.1486198 9.7860497 6.1230847 -0.2691644 10.0706173 9.2186073 9.4288932 10.5055543 9.4043708 10.7011130 3.3937319 10.7964033 NA 1.1458079 6.9818549 11.1353767 12.1129410 5.8531648 13.0058248 14.0282091 9.7175575 6.1956527 3.3157256 5.7896614 8.2319411 11.6072843 6.4265751 13.2694817 1.9531535 11.9718567 13.5090841 7.8617668 9.3996050 10.9822497 8.7742504 2.2332745 -1.8541269 12.5186937 9.1967895 0.4676968 7.6336448 -0.8541269 3.5381284 10.3439428 10.4524362 10.0901508 12.0566349 11.1458048 9.2272884 3.4677360 11.5324757 10.5319368 6.1847246 8.9426555 0.1457427 11.2637725 13.9889898 7.9863154 11.6432825 11.7143548 7.8956740 1.1458079 6.8358028 10.7248850 8.0780195 11.9188410 NA 5.0646673 7.6476419 9.3037833 11.1579055 4.9139904 5.1344879 3.7896562 10.1956533 12.3997262 4.0284454 13.1046747 6.7003939 7.1287986 11.4458713 13.6347433 13.3628537 9.2139113 10.0292118 10.6134104 10.1105970 10.7982017 5.4945340 8.5762572 12.1124905 10.6835086 -1.8541269 10.2942814 8.9523545 -0.2691644 3.5449799 9.8204384 10.8914791 9.7910129 9.5536038 14.6376736 9.7572908 9.7142361 8.9385951 0.1457427 15.7874615 10.2760537 13.5828416 11.7866146 10.5954693 9.0284479 8.7724264 11.2551132 1.02640000 1.75600000 1.81660000 -0.49538000 0.00235810 0.00444110 0.00000000 -0.42615000 -0.00152430 -0.00360110 -0.00360110 -0.00498440 0.48544000 0.48992000 0.00805670 -0.00069303 -0.00069303 -0.51187000 0.01167900 -0.49193000 0.00223520 -0.06678800 0.00194180 0.00194180 0.00194180 -0.02931100 0.41814000 0.43885000 0.49575000 -0.50871000 -0.49527000 0.04288700 -0.49538000 0.00444110 0.00444110 0.00000000 0.00000000 -0.42615000 -0.00152430 -0.00152430 -0.57822000 -0.01050800 -0.00360110 0.00499690 0.00499690 0.00499690 0.00499690 0.48992000 0.48992000 0.00805670 -0.00069303 -0.45179000 0.01167900 0.00209840 -0.49193000 0.00277450 -0.49183000 -0.49600000 0.00194180 0.00194180 -0.48176000 -0.02931100 0.43885000 -0.01945200 0.01349200 -0.49611000 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 -0.495 1.793 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.106 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 -0.495 1.793 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.106 7.7968566 12.2717026 6.0223212 9.0076673 2.1458079 10.8891666 0.1457427 NA 8.6215384 7.4125910 -0.8541269 7.0706169 4.4677360 10.7744781 9.0963607 0.7307486 4.5381222 10.1559832 11.4105406 9.2879118 9.6204233 8.5604899 10.1472131 2.5381160 9.9877623 9.2272884 0.4676968 0.1457427 10.0609373 3.2332745 12.4500848 11.6939042 6.9139892 9.9081869 8.1130311 9.6975130 8.5295090 -0.2691644 0.9531535 6.5804335 8.4381265 8.5208442 10.8303343 1.1458079 9.2931051 7.9156428 10.4581206 6.6888364 9.4856548 NA 11.3581492 1.4677490 3.8462426 9.8214620 6.0582754 -0.2691644 9.0284479 6.2010869 3.7605190 NA 13.8289091 -0.8541269 9.9893333 NA 9.4917643 4.3157329 8.5197573 9.1619166 12.273477 6.421928 8.462086 13.005825 9.822643 11.838202 13.269482 12.237571 9.204473 10.219277 13.446837 8.544548 8.078019 10.082443 1.467749 6.978694 12.563921 11.2431786 8.4967439 8.7687719 9.4363997 8.9048607 10.6466542 5.9659828 7.4856546 10.5055543 3.7896562 3.3552559 9.1970137 8.1360222 9.4404255 10.6669145 7.4265759 7.5990752 12.7328791 2.8462526 10.0901508 10.2398825 11.6269736 8.7382619 10.8630528 9.5429446 10.1840380 9.5490405 5.1902000 1.8462325 11.1579055 7.2647457 10.3103975 10.1956533 7.3257138 13.4457283 9.8579019 10.4741992 12.9015791 10.8958837 9.9349309 0.7307486 TCGA-C8-A275 56 0 NA 1 breast stage iia t1 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 147.48.0 NA NA 2 3 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.809913e-06 9.713281e-07 11.6043507 5.2683109 7.7564903 12.8490243 -0.1801683 10.1597021 NA 9.8944396 11.8539633 6.7426840 9.7545259 7.2544807 7.7971323 10.0936477 6.5791862 9.3596571 9.9266331 10.7461481 7.2572577 5.3009803 9.7091026 10.6493106 13.7274939 11.2001328 9.4104393 11.0152244 7.6963688 10.7757369 -1.7651308 2.2348998 8.8560258 11.4023078 12.8899172 6.4780642 17.4707730 12.4666358 9.0276799 5.5295118 1.8198725 4.1890892 8.6314943 5.4048146 5.1890852 12.8717408 NA 10.9999685 12.5940901 3.2348845 8.7522639 11.5635646 8.4048146 9.6394990 4.1656306 14.2577453 9.9559888 0.5567972 8.3551273 0.2348692 5.8642456 9.6464007 10.5599139 10.0203420 11.3432507 9.7803368 9.5995715 2.6272099 11.3185352 10.5361000 5.4345615 7.3250023 1.8198725 10.1938048 14.4898260 7.0562486 11.7291202 10.4848919 9.3859062 -0.1801683 2.0422591 7.0614382 9.0374061 11.5044547 0.2348692 4.8787450 6.6861013 10.2171702 11.0158394 5.7662718 7.4321067 5.9422494 8.9196383 12.0331589 3.4443490 13.7852156 3.5568218 6.8532746 11.4735929 13.3970449 12.7700435 5.7584524 9.7784049 10.4290309 9.5415210 11.5780753 4.8348022 8.6001184 12.6292853 10.3355519 NA 9.8899731 9.7065649 0.8198317 2.0473988 9.4154205 10.6996906 10.6713410 8.3170385 14.9402929 9.3564231 10.4732944 5.6012122 2.6272099 15.1117663 9.8080634 13.0032808 11.6894460 9.6861008 9.1190602 8.2928816 9.8420627 -0.01165200 0.44037000 -0.01464100 0.04329900 0.04329900 0.00597000 -0.00069303 -0.00650500 -0.00138580 -0.00719580 -0.00719580 1.75520000 0.00000000 0.00000000 -0.00851710 -0.00851710 -0.00851710 -0.00387790 -0.00387790 0.68347000 0.00319100 0.00527490 -0.01931400 3.65690000 2.60760000 -0.07361000 -0.48386000 0.29660000 -0.01257600 -0.02753500 -0.01165200 0.00499690 0.04329900 -0.48208000 0.00597000 -0.00069303 -0.00069303 -0.00650500 -0.48008000 -0.01019300 -0.00664320 -0.01477800 -0.00719580 0.00110930 -0.00581400 0.45105000 0.45105000 0.00000000 0.00000000 -0.00851710 -0.00672600 -0.00387790 -0.46547000 -0.01023200 0.24218000 0.00319100 0.00513590 0.00110930 -0.01931400 -0.50370000 -0.47162000 -0.07361000 1.50550000 -0.01257600 -0.00180140 -0.01876500 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.000 0.450 0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.000 0.450 0.181 9.3525328 12.2161893 3.4048214 8.3947611 6.2348902 11.2572575 3.3223464 2.6943231 8.7952224 8.6368359 NA 7.5769642 5.0030760 11.2779169 8.9611079 2.8198521 8.9695992 9.7070728 11.7459010 10.1217293 8.2055709 8.0788105 10.2593368 3.3223464 8.3381775 9.5995715 1.8198725 NA 12.4706047 1.6943008 12.8065830 12.4499676 7.9611076 9.6840383 9.4498158 11.5962852 4.5747373 2.8787450 0.5567972 4.6778352 8.2710633 8.6902170 11.5627230 2.5568218 7.6345519 6.7307446 10.1626676 6.1715271 9.9956096 -0.7651308 8.8123185 3.5202965 3.5202965 9.3986400 5.6060128 7.7990394 9.2398124 8.7613890 9.4351752 4.2121724 13.7077708 2.4048214 10.4896230 NA 9.3922365 3.2792781 8.3808216 8.4048146 9.977199 7.092870 8.539811 17.470773 10.736976 10.331605 12.871741 9.209304 9.045461 10.896890 13.319449 8.813262 9.037406 9.131979 -1.765131 8.883247 11.609929 11.501237 5.758452 8.656954 9.207152 8.570280 11.134551 7.572512 8.268313 11.200133 8.875135 1.694301 6.983083 8.800201 12.239812 11.269861 7.268313 9.750097 10.118297 8.291527 10.020342 10.380185 11.310536 10.045060 10.969599 9.025238 -1.765131 9.527470 8.226412 8.535242 11.015839 6.979724 11.527355 8.919638 7.902001 13.476240 10.804983 10.646930 12.199321 11.699691 9.881898 3.661157 TCGA-C8-A278 61 0 NA 1 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 142.49.0 NA NA 4 5 NA NA 2 6 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.396621e-07 8.343418e-08 11.215691154 4.869782592 7.473745520 10.134011293 -1.589441802 10.011656924 -0.589658895 9.618584639 11.109055046 6.243240641 9.621630301 7.145059898 8.406117399 9.949509108 5.497813524 10.277242875 9.344778353 10.231327038 7.939780766 7.292993354 9.893158316 9.840802938 13.226884062 9.505747455 10.106883242 10.329213538 7.390489711 10.672148534 NA 2.732269200 8.983050597 10.672445232 12.949751529 7.776672530 15.985269040 11.959653710 8.692280374 5.560097398 -0.004624027 5.443772393 8.983997410 9.325482886 7.148443025 12.558509133 -1.589441802 10.308195778 12.017102541 1.995303605 9.509698217 10.658277902 7.562635486 4.191712660 -0.004624027 14.028303011 12.171797692 0.732312621 7.904205889 NA 7.484491832 9.278401135 10.738183650 9.304410192 10.494494316 10.214884794 9.640370760 -0.004624027 10.969966433 9.166072425 4.539630325 7.441017789 9.885577110 10.385123396 14.160978841 7.321322938 10.939536829 10.320243441 9.296809090 1.410341105 3.165236648 6.335163436 8.986834693 12.056571539 0.410341105 5.980205854 6.672445144 9.633145273 11.073018722 8.059606745 7.817618142 5.476440016 10.402934666 11.935871156 4.918142902 13.265218734 6.204766751 6.865677603 12.172940018 13.814926487 12.782467213 6.497813524 10.335533835 10.716696874 9.807190516 10.764324175 3.539630325 8.370352192 11.948660559 8.235309181 NA 10.039706908 9.982576815 0.410341105 2.322995294 9.543492597 11.093783639 10.159800840 9.876936648 15.341965086 9.863106351 10.224131583 7.639169203 2.497816717 14.843691280 10.067668830 12.634125834 12.514375701 9.033317273 8.797290592 7.796212917 8.825035725 0.0000000 0.0000000 -0.1671400 0.2283900 0.2664400 -0.2675700 -0.1380700 0.0179630 0.4355800 -0.4065000 0.4324300 0.5788000 0.0284810 0.0308730 -0.2039800 0.1580100 0.1580100 -0.1023600 0.1241700 -0.2098300 -0.0346310 -0.1398700 -0.3471000 3.6569000 0.9473100 0.0144700 -0.1514400 -0.1514400 0.2649800 -0.1593700 0.0000000 0.0072217 -0.0083005 -0.2675700 -0.2675700 -0.1380700 -0.1380700 0.0179630 0.0179630 0.0036076 0.0290440 0.0290440 -0.4104700 0.0254120 0.0254120 0.0254120 0.0738330 0.0308730 0.0308730 -0.2039800 0.1580100 -0.1023600 0.1241700 -0.3128400 -0.2148600 -0.0346310 -0.1398700 -0.3441200 -0.3471000 -0.3421700 -0.2336100 0.0097276 -0.1514400 0.2649800 0.2265300 -0.0219210 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 0.000 9.574000056 12.699504698 2.410341105 8.566433505 5.931635786 10.813362348 1.217727042 -0.004624027 8.657090816 10.292993354 -1.589441802 7.666983770 3.836610908 11.430462170 9.086307427 3.619800338 8.442396163 9.303651996 8.938804476 11.702672000 9.280298918 6.999065327 10.815225808 2.658280045 5.619803272 9.640370760 6.658277188 NA 9.804277058 0.995303605 13.142146667 12.786950581 8.915169207 10.261318542 10.611861668 9.556282448 6.524091892 3.580278168 -1.589441802 6.243240641 8.658277902 8.804813155 9.912684890 2.497816717 9.159691745 6.806955549 9.766802349 6.280715102 9.034231950 -1.589441802 9.838710573 3.497816717 3.869782592 9.859937567 6.803741086 9.605107221 8.963979788 9.036971958 10.310084909 2.497816717 13.597547748 -1.589441802 9.907204197 NA 9.928019675 4.110789173 8.466987993 8.853293959 11.364539 7.246400 8.716412 15.985269 9.874386 10.615533 12.558509 9.201513 9.523585 10.184726 13.012759 10.202327 8.986835 7.995313 1.217727 9.557555 10.995782 11.0683386 5.4666075 9.1425178 8.4354898 8.3262299 10.7035519 7.0139769 7.6818133 9.5057475 6.3351634 0.7323126 6.3818942 7.4956368 10.6267931 10.2975710 8.8748962 7.7962129 9.1280268 9.7175512 9.3044102 10.7364989 10.8924020 8.7401467 10.6415715 9.1710702 7.3990352 9.5783768 7.7135377 10.2998543 11.0730187 7.9745001 11.1120900 10.4029347 7.2464005 13.7125462 10.6588710 11.2078092 11.9862441 11.0007035 9.3557942 5.9260492 TCGA-C8-A27A 48 0 NA 371 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 142.49.0 NA NA 1 3 NA NA 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 12.1838034 4.1342702 8.3996988 10.3830231 0.3476657 11.2711502 3.3111543 10.4377865 11.4422797 8.0715058 10.1978610 7.9520423 9.0951958 9.3471104 7.8696672 9.4712783 9.6655390 11.2850480 8.2509535 0.6107001 10.0985485 9.0958669 13.6762088 10.6092990 10.1204835 11.2371781 3.6107119 10.4710196 1.1956626 0.3476657 9.1697669 11.5209765 13.0383706 8.3260987 11.8183330 11.7940338 7.6312258 6.5414451 4.2736725 4.7939323 8.9423720 4.5803324 6.0200999 13.1054808 -0.9742624 9.4877370 14.0336712 0.3476657 8.9733831 11.5639350 3.1550368 8.6349246 3.3833034 13.7051679 6.9114423 3.8331026 7.9190474 0.6107001 4.6107060 9.5784152 9.8774950 9.6210035 9.2100016 10.0908255 9.0264504 3.5493118 11.8233063 9.2742666 4.7399939 7.1025616 11.9427451 11.0442940 13.6601033 9.0007485 10.9880998 12.1596107 8.3283850 3.1132171 6.3744744 8.5697444 9.3772374 10.1283780 -0.3892999 6.6839575 7.5512668 12.1521279 10.5714345 7.0646652 5.0918352 4.0481141 11.6199540 12.2878409 5.6910819 13.8601677 5.2351986 8.0001606 10.8615990 9.5571274 12.8951471 8.2689200 10.4404313 11.4707609 11.0139354 11.1614554 4.9446102 8.3689316 12.3930925 11.9555592 0.3476657 10.0257460 9.1881373 -0.9742624 3.7286824 9.1518050 11.0935165 11.0294396 10.0488073 15.0752756 10.6616908 10.4367273 8.6505416 0.8330925 14.9890937 7.3318073 11.0956992 10.4756685 10.2515560 8.8111984 8.7253185 10.0398013 -0.336220 0.073356 0.073356 0.082141 -0.030908 0.025766 -0.424640 -0.374530 -0.376990 3.656900 3.656900 3.656900 0.059605 -0.754320 0.854760 -0.179240 1.262000 -0.642670 -0.310480 0.026609 0.104490 1.565900 -0.693350 0.966720 0.846850 -0.676840 -0.676840 -0.676840 0.443020 -0.240500 -0.336220 -0.305260 0.012004 0.019219 0.030827 -0.755500 -0.737250 -0.360150 -0.376990 -0.378710 0.056181 0.066469 -0.810320 -0.398120 -0.016714 0.035503 0.129430 -0.754320 -0.925800 -0.718200 -0.275390 -0.742230 -0.307370 -0.331460 0.026609 0.104490 1.469800 0.031389 -0.732500 0.195830 -0.118770 -0.623630 -0.676840 0.059319 0.143800 -0.843660 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 7.19817391 10.98085104 7.02574642 8.89225228 3.03920860 11.61808629 -0.97426244 NA 9.07967198 8.50754532 -0.97426244 7.42235075 -1.97426244 10.68082944 8.75960860 -1.97426244 6.92661267 10.92529176 8.03557443 8.97338311 9.63466151 7.28313374 11.47399142 0.34766566 10.44649580 9.02645041 2.11320040 -0.97426244 11.64848427 7.24249199 11.95740695 11.91999541 7.82987683 10.37696135 11.13525024 8.89379691 7.59749840 2.54929952 -0.97426244 0.02573756 7.50350457 7.64229507 9.60411878 4.82016364 8.36400330 5.92661386 10.28901529 6.47695677 10.31114830 -0.97426244 7.73655279 2.93262816 6.16017195 10.09802945 7.54016447 6.21556989 7.89765127 6.98284759 6.90532924 NA 12.97461513 0.34766566 11.08441432 NA 9.63307641 6.92661267 8.57553055 8.95278317 13.429363 5.443600 9.408910 11.818333 10.493150 10.818740 13.105481 13.081071 9.694631 10.286078 12.306734 12.450044 9.377237 8.503504 1.195663 8.125094 11.727269 11.0142533 7.6200710 8.6153972 9.5658742 10.3986111 11.1552303 4.5335384 11.3374944 10.6092990 7.6088285 1.6107001 6.7570646 10.3382916 10.8540809 10.0080266 9.6848499 9.4367274 11.2690688 6.4892700 9.6210035 10.6312255 11.5411995 9.0715058 10.8122199 9.7030252 -0.9742624 9.0516815 6.7885265 6.8899322 10.5714345 6.1754927 11.2033213 11.6199540 7.5316965 13.4787916 10.3810971 10.6144607 11.8652451 9.4430712 10.1834087 2.4180550 TCGA-C8-A27B 48 0 NA 30 breast stage iib t3 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes NA asian not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.64248e-06 5.897349e-07 12.9203085 0.3841604 5.5621233 10.1134880 NA 10.5488626 -1.9378783 9.3308210 11.3948750 9.4974283 9.7910499 8.0664993 8.9109020 10.3363659 5.3569009 9.3993433 8.5420591 11.0235478 9.1059899 4.7487779 9.6072434 11.5050929 13.1605578 9.7435173 10.4299668 11.1023975 6.6091728 11.3587636 5.6916347 -0.9376019 8.2970965 11.6936834 13.4629917 5.0280652 10.0172023 12.2681486 10.0106461 4.4716687 2.8171730 7.2935002 8.0929463 9.0040603 6.6283333 8.1430964 -1.9378783 11.1003406 9.8341811 5.5700743 9.1902734 10.9671017 5.5217104 8.9303299 5.0846468 13.6922013 10.5963386 0.3841604 8.7267263 -0.9376019 4.8304632 9.8684258 10.3340338 9.0984525 10.8469139 9.8864422 9.9077690 0.8696346 11.3825154 10.6642818 3.4545971 7.5936608 0.3841604 7.8840527 14.1148683 7.4902412 11.0652698 10.4405739 10.6989036 1.5217041 NA 8.5907330 9.5931730 11.0422400 NA 3.8696346 6.5010713 11.0204691 10.8981320 3.8436422 7.9046292 4.7627209 8.9349537 12.4515742 -1.9378783 13.4990881 2.7627102 6.5258027 11.1317288 10.9435842 13.3213969 4.4021287 10.9798375 11.4140464 9.8953350 11.4028245 4.2910952 8.1243250 12.3223899 8.7007151 1.0622599 9.5155496 9.5873102 1.8696346 3.2744555 10.0836060 12.1995904 10.5638674 8.8403562 15.0991823 10.9544423 10.4449030 7.3660599 NA 12.6324312 3.3842018 12.6475937 12.0475873 9.9132471 9.0359763 7.5380127 9.7494840 0.4807900 0.4807900 1.3919000 -0.3795400 0.4307500 -0.3623300 0.6997000 0.0000000 0.1068700 0.0428740 0.4209900 2.0036000 0.4238500 0.0486880 0.4223400 0.0280600 0.0420240 -0.4018500 0.0652260 0.1083300 -0.3457200 0.0553730 -0.3911800 -0.3911800 -0.3911800 0.3813800 0.3660800 -0.3969700 -0.3946400 -0.4024100 0.4807900 0.0629370 -0.3753800 -0.3742600 -0.8057500 -0.3825700 -0.3773000 -0.4028500 -0.3541900 -0.3735400 -0.3683900 -0.3458400 -0.8364800 2.0733000 -0.3926100 0.4120900 -0.3864900 -0.3722300 -0.0041546 0.0424490 -0.8463600 -0.7941900 0.0391630 -0.0030475 -0.3692900 -0.3699700 -0.0380340 0.3210900 -0.3911800 -0.3911800 -0.8099700 0.0277780 -0.3969700 0.0210370 -0.3552100 0.4571700 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 8.1576759 13.4029984 -0.9376019 8.9922770 4.4198287 11.8057460 1.2322310 6.5936600 8.9563387 7.4459832 NA 7.9027266 4.1708064 10.6916356 9.4647581 2.2322002 8.0495431 11.4670214 5.6621913 8.4318761 8.6138624 6.5134907 10.0787391 3.6769895 8.3568996 9.9077690 5.8501818 NA 9.4099002 3.8436422 11.7575073 12.1005979 7.6806647 10.1912399 10.4206555 9.9844917 1.2322310 2.4545971 NA 2.1497471 7.8354182 7.4927313 7.4885439 -0.9376019 7.7798014 5.8304632 10.0463414 4.7061327 10.7110859 3.3842018 11.7898804 2.3842156 3.2717394 10.0719606 6.7418296 6.5975550 10.2539551 9.1622843 8.0179291 4.2120245 13.3265383 1.2322310 10.6233282 NA 8.3196667 4.9570974 9.4626248 9.5917095 10.378843 8.591710 7.887238 10.017202 10.187692 11.813509 8.143096 12.117138 9.266239 10.292299 13.642302 11.877662 9.593173 7.802059 2.384216 8.631185 11.397948 10.086033 9.964277 9.832943 9.837889 9.594148 10.294490 6.609173 4.454597 9.743517 9.213930 NA 9.288089 10.079317 12.051052 10.785513 8.529885 7.798681 9.527335 7.647242 9.098452 10.451372 11.737905 11.065797 10.440845 8.079087 NA 8.244798 6.929558 8.112128 10.898132 4.720492 10.165560 8.934954 8.125674 14.481383 9.963523 9.914028 12.600953 11.010829 8.938028 1.869635 TCGA-C8-A3M7 60 0 NA 1 breast stage iiib t4b n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 asian not hispanic or latino 216.36.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.142688e-06 1.056833e-06 10.9021594 8.8099896 7.2532244 10.9102985 4.0068456 10.6122131 2.6400656 9.9957635 11.0084562 8.4158913 9.7292015 7.9957632 8.8057651 9.8729272 5.1603232 9.1726768 10.2590296 9.3593633 8.7038856 4.0645639 11.2541932 11.0040841 10.0054661 10.8212823 9.8345622 10.5472716 5.2869551 10.5592416 2.7140696 1.8515592 9.4722883 12.8172218 13.2237412 7.7994047 12.2361563 12.5908123 9.5342441 6.1800404 2.7844621 6.9428839 8.9244931 7.9038897 6.9808513 12.7488642 -1.6077925 10.9948360 11.9781559 6.2686533 9.1652764 10.7078528 8.3020302 5.9467262 -0.6077925 13.5718612 9.3441503 3.7140696 8.8719172 NA 7.5595553 10.1549344 10.4514816 9.1553495 10.8939743 10.6430277 9.9322651 5.0359933 11.7321262 10.2594159 5.7758407 7.9752198 12.0974455 10.3466970 14.6064752 7.1030129 10.7964804 10.1536883 8.8525929 0.7140476 6.1403308 6.8015286 8.9770996 11.8613973 -0.0228300 6.2501184 7.0786376 10.3247209 11.2429099 7.3139777 6.0856244 2.5620592 10.5016413 11.9297195 3.8839922 13.6523951 4.3694176 8.1865530 11.5757725 12.5556295 12.8031184 6.5819613 10.0667708 10.6119106 10.5214201 11.0788564 4.5006619 8.9283842 11.4637671 10.6821559 NA 9.9205912 9.1792234 1.8515592 4.7525024 9.8844911 10.1763629 10.2293708 8.2899824 14.9954737 9.6624325 9.7513375 9.2493406 4.3921388 14.4017689 9.8412857 13.6087693 12.3379467 9.6251576 9.7392048 8.6717477 9.9889837 -0.1405200 0.3327000 0.6790100 0.0027745 0.0027745 -0.0290380 0.0073609 -0.0465830 -0.0465830 -0.0020784 -0.0020784 0.0061090 0.0181030 0.0216030 -0.0184900 -0.0162920 -0.0162920 0.0188030 0.0188030 0.0000000 0.0235660 -0.0700010 -0.3492700 -0.3492700 -0.3492700 0.0479780 0.0363220 0.0363220 0.0269350 -0.1405200 -0.1405200 -0.1343200 0.0027745 -0.0073339 -0.0323010 0.0073609 0.0073609 -0.0465830 -0.0465830 -0.0465830 0.3023400 0.3082600 -0.0020784 0.0045800 0.0045800 0.0045800 0.0193630 0.0216030 0.0308730 -0.0184900 0.0283410 0.0188030 0.0188030 0.0188030 0.0045800 0.0235660 -0.0700010 -0.3522500 -0.3492700 -0.3492700 -0.3713200 0.0479780 0.0363220 0.0269350 -0.0117490 0.0310140 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 8.8779663 11.7254323 1.3921525 10.0382458 3.8515692 11.2657734 1.1994996 -0.6077925 8.8556615 8.0873652 NA 9.2419019 2.5620592 9.6884797 9.8062938 2.0925796 10.3579214 10.0137312 11.0452061 9.3794011 9.6787700 8.2975239 12.5198091 2.1994996 9.2914940 9.9322651 5.6682610 1.5620836 10.3269337 4.9619937 13.3355219 11.8892405 10.5058792 10.6137242 9.0205828 9.0068470 4.7671781 -0.6077925 1.9770967 0.7140476 8.2793575 10.3199150 10.7030339 7.9274124 9.7107252 7.7118094 9.7709739 5.9994679 9.2655813 0.7140476 10.7595518 1.7140476 5.9078377 9.9963798 5.9283466 7.4927994 9.6173446 9.9925147 9.7061537 2.1994996 14.1612001 1.3921525 10.0685350 -1.6077925 8.5342441 7.8099893 8.2532240 9.2099202 11.522852 6.099497 9.014189 12.236156 10.687430 11.389846 12.748864 9.741971 8.999467 10.473953 13.114091 9.467616 8.977100 7.640065 1.392153 7.380822 12.033060 10.822067 7.372277 9.109813 9.118355 7.628151 10.323569 6.557044 7.784454 10.821282 6.644802 3.392139 8.619753 6.591368 11.703460 10.570802 7.782306 8.849518 10.737542 7.754081 9.155350 10.472288 11.445384 10.655700 10.449113 8.530409 9.557044 9.987465 8.823885 8.452833 11.242910 5.977099 10.736988 10.501641 6.912049 14.316807 9.984594 10.648346 11.978156 10.510754 9.800998 3.562059 TCGA-C8-A3M8 68 0 NA 7 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes NA asian not hispanic or latino 202.42.0 NA NA 1 3 NA NA 1 1 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 9.733988e-07 2.224912e-07 11.97966337 5.57692417 6.53605290 11.23282064 1.55252463 10.24158603 NA 9.92203918 11.41855539 9.23330019 10.31499860 7.45066113 9.09662740 9.91727256 7.03268825 8.31831684 10.88101199 9.57187909 7.09028924 0.67807191 11.55535604 9.97994916 14.54991299 11.62558708 8.72973391 10.63686629 4.55254307 10.80691907 0.41500143 1.09308686 7.50250008 11.34414791 12.47748844 9.57440431 14.20591540 13.02296882 8.83457629 5.28293273 3.09310377 5.48542683 8.50037704 9.01940531 8.24919264 13.46672228 0.41500143 9.71607641 14.64570346 2.09312068 9.43468389 10.94641894 7.41052174 8.76906655 0.41500143 13.04775240 8.16050326 3.00000000 7.13202874 -1.90671027 5.32192809 10.05672807 9.72837412 9.62692585 9.82739558 10.15987134 10.05311134 7.30742853 10.87426420 10.62058641 6.90689060 7.75132111 2.00000000 11.27627954 14.92598706 8.51230077 10.82506475 11.51648798 8.41953889 1.41505553 7.12377689 8.45505304 10.03415696 9.77960988 0.09315449 6.78310694 7.52982095 9.31167272 10.44128427 5.21205177 3.95109351 3.84799691 9.72155500 11.66628317 6.45066196 13.06024558 5.43295941 7.38773044 12.72638848 11.57579132 12.67865883 9.00824176 10.85694423 10.93172242 10.46405834 10.60856283 4.55254307 8.95186750 12.39016896 12.42668408 -0.90698077 10.31861816 8.95806922 2.61666352 3.84932878 10.12170614 9.98641094 9.66580969 9.15245395 15.68269472 10.18817675 10.02937931 9.23585460 2.48542683 15.94423011 7.22496637 12.45347642 10.15448055 8.12515513 9.57843553 8.33866196 11.06679240 -0.01243800 1.01360000 1.13720000 -0.00470790 1.15640000 0.00110930 0.11800000 -0.01285100 -0.00475610 0.56028000 0.56028000 -0.01436600 0.00055459 0.03045100 0.00791750 1.75760000 -0.63708000 -0.00816240 -0.00816240 -0.64038000 -0.00026319 0.00000000 -0.04428000 0.55968000 0.55968000 -0.02753500 -0.02753500 -0.02835500 0.61426000 -0.02917500 -0.01243800 -0.00083160 -0.65463000 0.00110930 0.00110930 0.07757400 0.07757400 -0.66624000 -0.00475610 -0.00475610 -0.00733390 -0.00180140 -0.64874000 0.00583090 0.00583090 0.00583090 0.00583090 -0.64170000 -0.64170000 0.00791750 -0.64208000 -0.00816240 -0.00816240 -0.00816240 -0.64038000 -0.00026319 0.00000000 -0.64668000 -0.65435000 0.55968000 0.00861350 -0.02753500 -0.02753500 0.61426000 -0.00124730 -0.00138580 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 7.54432077 13.19946787 4.11547444 9.82145512 3.02809171 12.06132620 1.79356299 0.41500143 8.66864853 7.35049725 -0.32192809 7.60880924 4.55254307 10.86439255 9.23840474 5.41503863 7.84799691 10.54174200 10.46597446 10.52695565 10.46941929 8.20294022 11.80960737 2.18056164 8.08179391 10.05311134 3.51937835 0.67807191 11.29508013 4.20163386 11.28030681 12.05582470 8.04875931 10.23330007 7.98792736 9.58846486 3.61667528 3.09310377 0.09315449 3.70782293 9.26678654 9.45560114 11.25707352 5.45066031 11.24024438 7.73696537 9.67713240 6.37387959 10.02901109 NA 10.88935185 0.90049009 9.03268853 9.25354804 7.33545021 1.90045145 8.67994908 8.66486217 3.87447240 -1.90671027 13.04097460 2.26303441 10.83752284 NA 6.76906688 6.98185265 7.91806834 8.26803524 15.173563 6.761994 8.746850 14.205915 9.446256 11.006747 13.466722 13.921791 8.042936 10.455053 12.891125 10.349023 10.034157 8.517276 1.093087 7.951091 12.075479 11.4696418 6.4105226 8.7952822 9.0596149 9.5277376 10.6693929 5.7004397 7.5401924 11.6255871 7.8004683 -1.9067103 6.4059924 7.6548938 10.6698300 9.3923174 8.0675242 9.3645724 11.7517672 3.4150420 9.6269259 10.7531053 11.3864374 10.6532034 11.0015020 8.6695938 NA 9.1050565 6.6950654 3.7935526 10.4412843 6.2120498 10.8276073 9.7215550 7.7926816 12.8012772 10.2396781 9.6186302 12.3059097 10.6102867 10.4629794 0.6780719 TCGA-D8-A13Y 52 0 NA 362 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 4 3 1 NA 1 4 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699824e-06 4.85664e-07 11.6688379 -0.4538340 7.8430882 10.0848456 NA 9.7248365 1.3535491 11.2269707 11.0945119 7.2361692 9.3160095 7.7085632 9.1045925 9.9459836 6.5795950 8.0519832 8.1423614 10.6563287 7.8635842 NA 9.7396971 8.4041525 12.5897116 11.0440235 12.0720595 10.4820733 -0.4538340 10.5169642 0.8681336 3.7941039 8.2621338 11.6928994 12.9321015 8.0299873 9.6748105 12.4718188 9.7635236 5.9555616 2.7941039 7.7409282 7.7433884 7.6882790 6.8129577 12.0759682 8.5191515 10.6748104 10.0843606 6.1460849 10.0770315 10.0470136 8.2943643 6.9849630 4.8860233 13.2331055 7.1122258 4.7556247 9.2901645 3.6754546 2.6336404 10.0299874 10.1418954 9.1217109 9.0862997 10.0838754 8.6933765 -1.4536364 11.7403129 9.6183042 5.4886853 7.1608819 1.3535491 8.5348565 13.6665716 9.6919382 10.8367666 10.5101515 10.5352113 3.1311285 4.5685368 9.0470135 9.3861628 9.9958362 6.8815618 5.7260819 7.0056032 11.3087613 10.7522702 5.9807999 4.1900301 5.0380235 8.4165362 12.2939451 4.0697365 13.3703846 6.9341886 8.0559467 9.0239298 12.2902697 11.8579200 7.0340121 9.7641293 10.9470511 11.4134523 9.7347606 4.6122581 9.4500536 12.5345013 7.7310468 NA 9.9560930 10.5956799 NA 7.4977185 9.5789063 8.7833817 10.4360558 10.4912496 14.3961142 9.6625156 10.2348591 7.1791667 7.3470712 12.0385256 7.5234514 10.3994812 10.4103579 10.5761490 10.1442242 9.1442241 9.9605344 0.7858200 0.0380650 0.0370760 0.8720900 -0.0128700 -0.8513000 0.8473100 -0.8924300 -0.8608200 1.0945000 0.3726500 0.8623500 0.0118180 -0.8657000 -0.0369460 1.1447000 1.1447000 0.0105640 0.8067500 -0.8446500 0.0104240 2.2129000 -0.8310900 -0.8310900 0.8083100 -0.8247200 -0.8247200 -0.8557200 0.8122000 -0.8339700 -0.0468330 -0.8425100 0.0248290 -0.8766900 -0.8690800 0.0151680 0.0290440 -0.8924300 -0.8608200 -0.0033243 0.0071858 0.0512450 -0.8777500 -0.8719700 -0.8719700 0.0058309 -0.8273300 -0.8657000 -0.8821500 -0.8674300 -0.8632600 0.0105640 -0.8561500 -0.8659400 -0.8446500 -0.8571800 -0.0076277 -0.8755700 -0.8642900 -0.8310900 -0.8916600 -0.8247200 -0.8247200 -0.0378980 -0.0309500 -0.8729100 0.000 -0.866 0.000 0.000 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 0.000 0.000 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 0.000 -0.866 0.000 0.000 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 0.000 0.000 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 7.3176613 11.7146871 6.2740920 10.7773928 4.2659019 10.0480089 NA -0.4538340 9.1627206 8.4196156 4.9037228 7.1386292 4.2740902 10.0071394 8.8176348 6.4165358 4.1900301 10.0375238 9.5967006 9.4188465 8.4454230 8.9724365 10.9111270 -0.4538340 8.6269892 8.6933765 3.5461660 -0.4538340 11.5401714 5.3916612 11.3127006 11.4698706 6.5850902 9.9719121 6.9212114 8.7135900 9.4103579 0.5461660 -1.4536364 8.7322858 7.7821857 9.1654746 8.3438333 8.9692875 9.1729850 6.1084136 9.4687560 6.6442038 9.3135286 1.5461660 7.5263114 1.3535491 5.6122611 9.3986467 8.2306747 NA 9.1404962 6.8993182 -0.4538340 0.8681336 13.8271961 0.1311944 10.3806427 NA 9.1226559 6.0930657 8.3193108 7.3947945 8.742651 8.656002 7.784577 9.674811 9.810614 11.188223 12.075968 13.352671 9.941143 11.080667 11.849667 9.801790 9.386163 7.479863 3.453057 8.284264 9.937415 10.5376935 8.8882464 9.0117176 9.0350160 3.5003687 9.5865779 4.3790595 9.1737056 11.0440235 8.5277389 1.7161129 8.7433884 9.6419116 9.8164669 8.3822220 7.4379551 9.4417470 9.3052275 0.8681336 9.1217109 10.0299874 11.7058854 10.2947838 10.4249889 8.4072584 1.3535491 8.5801726 10.3214939 NA 10.7522702 7.5517959 10.8425430 8.4165362 8.6561460 13.6558799 10.0137773 9.5369848 11.2657744 9.5553004 8.8982150 2.0056156 TCGA-D8-A13Z 51 0 NA 635 breast stage x t2 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 9 white not hispanic or latino 85.58.0 6 3 4 NA 1 3 2 6 1 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.699824e-06 2.42832e-07 11.8484075 5.5534711 8.0098835 11.6513810 0.9178518 10.2219882 -1.8895031 9.4609131 11.9180826 6.6340879 10.1956669 7.7215511 8.9977471 10.4108790 7.1384326 9.2672415 9.5953494 10.2988062 8.3453440 7.9065660 9.7421583 10.5663674 13.1586301 10.9428232 9.5776226 10.5454152 6.1384316 11.0766714 -0.3045406 -1.8895031 8.8753980 12.9908753 12.4676660 7.5092699 11.8885009 12.2125842 9.6058819 3.5367865 -0.3045406 5.4855653 8.4074428 7.8418455 7.4526012 12.6072554 0.6954594 9.7471510 6.5028445 6.7651621 9.4445929 10.7187812 9.1986520 4.3199791 3.0647277 14.3417838 8.9455187 1.8109777 9.0144083 NA 5.0293910 10.4171578 11.9113253 9.4114510 9.6870108 10.6331080 9.9966040 0.1104969 11.6355578 10.1732473 5.7970260 8.2019617 12.3654812 9.2164350 15.3379732 7.3252101 11.3042058 10.9712255 11.3233268 2.6340821 2.6340821 9.2032836 9.2481581 11.8610241 0.6954594 8.2398095 7.4963888 10.2245941 10.0852996 6.3959282 6.5451545 5.3866523 8.9528769 11.9929785 0.6954594 13.2748049 3.5028398 7.2216625 11.7384023 13.9488933 12.6180734 7.8787106 11.4460564 10.4125941 9.6271276 11.3316604 4.8654141 8.2111889 11.7292561 9.9422296 NA 10.2111888 9.5555413 -0.8895031 3.2586546 10.4573172 11.6984211 10.1473868 10.0196695 14.8802352 9.9754863 9.4420034 6.8074940 3.9178804 13.2547067 9.8209024 13.2032836 11.5212428 11.0321814 10.0963683 8.3537004 10.3322707 -0.137940 0.553540 0.587930 -0.232270 0.269700 -0.500700 0.033690 0.707010 0.806170 2.191000 -0.735380 0.052241 0.522060 0.522060 -0.101970 -0.509290 -0.509290 0.748610 0.266870 -0.247880 3.656900 -0.327970 -0.157970 -0.157970 -0.157970 0.240070 0.240070 -0.070536 0.279630 0.154120 -0.137940 -0.250790 -0.232270 -0.506390 -0.777190 -0.505150 -0.018902 0.549120 0.608400 0.575230 0.000000 0.000000 -0.783800 -0.232640 -0.232640 -0.212310 -0.212310 0.522060 1.073800 -0.101970 -0.170690 0.534150 0.266870 0.266870 -0.425710 -0.158730 -0.223790 -0.219230 -0.157970 -0.157970 -0.495590 0.240070 -0.070536 0.288990 0.505330 -0.263480 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 8.6003746 14.2413584 3.9178804 9.1630946 4.4324517 12.4049318 3.6651199 4.1549234 8.6083783 8.2577315 -0.3045406 7.5679485 1.4324784 10.4117368 9.1446376 1.9178900 8.1328945 9.9158673 8.1494453 8.7261562 8.6993441 7.5283791 11.0808121 2.5699528 8.8927055 9.9966040 1.4324784 -1.8895031 9.9000601 1.8109777 11.6360472 13.0384433 7.5720059 10.2785718 10.5890433 10.1752692 6.9901096 3.4324517 NA 6.4548224 8.3477365 8.9219010 10.4760287 3.4680750 9.1491986 6.3150970 9.8165907 5.7900057 9.4757553 1.6955039 11.3534028 3.1979912 3.5367865 9.5355273 6.9553581 6.0763111 9.7611295 9.0493710 6.6458025 3.7543851 13.2105728 1.2804219 10.2388431 NA 9.7597827 4.7829537 8.5399331 7.9716131 10.610123 8.871246 7.670859 11.888501 10.120005 11.298033 12.607255 9.190011 8.758884 11.768961 12.816375 8.378483 9.248158 9.105587 1.432478 7.569958 11.258367 11.5739231 6.3150970 9.3637830 8.9122349 9.0683540 10.5062480 7.4414436 5.8452366 10.9428232 9.6173299 1.5699771 9.5998727 8.8975475 11.7904463 10.5420241 7.1020481 8.6737228 9.5740508 6.9901096 9.4114510 9.9255093 11.8828410 10.1900112 10.9077827 9.1535538 -0.3045406 9.5014907 8.2120294 7.0174175 10.0852996 6.9591500 10.6034637 8.9528769 8.0559705 12.6677508 10.3065138 10.1549206 12.4998217 11.7873651 9.6761046 1.1104969 TCGA-D8-A140 62 0 NA 403 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 85.58.0 3 1 1 NA 2 4 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.613061e-06 5.284165e-07 12.2659195 5.8600888 6.4771835 11.3808926 -0.3494192 10.9452554 0.6506727 10.4886568 11.7724920 7.3988275 9.4866850 8.8734297 9.1008150 9.4652172 8.4237740 9.5462100 11.4206791 10.1514766 7.2542614 3.4055159 10.4571844 8.8890394 14.1825340 11.2479890 9.1474886 11.1359609 7.1263679 10.2662644 1.4580145 0.9725456 8.4851060 12.0820017 12.6295239 8.5469670 13.9614250 13.5455946 8.2468247 5.5931506 2.3510629 5.2204886 8.6813020 10.0305546 6.7850614 12.7198327 2.4579882 9.7200845 14.5761428 NA 9.7690761 11.2551879 6.9314053 9.4409831 0.9725456 14.2119922 7.8180529 -1.3492354 8.0169570 -0.3494192 6.6164195 10.1941500 10.0972011 9.9273408 10.6382541 9.4071911 9.7895464 1.2356045 11.6921228 10.5492361 7.6478146 8.1080158 2.5575326 11.4491065 14.3695421 10.0441163 12.2479890 11.3635915 8.3819539 1.9725456 6.1975293 8.5515014 9.7766939 11.2971934 NA 6.1018454 6.9174210 10.5186856 11.6091874 6.8600875 6.5635243 5.3230602 10.0836984 12.0669045 5.9815513 13.3736557 4.9360348 7.3476019 11.7371027 10.9756591 12.8580304 7.9882564 10.4462685 10.8539827 10.9138423 11.6416250 5.1741987 8.1584294 11.9380586 11.7913047 -1.3492354 10.2922349 9.5960785 1.9725456 3.1984470 10.3912587 10.9663504 10.3648802 9.4882627 14.7470410 10.1859101 10.8688952 8.8292997 1.8205670 15.7868549 7.9521308 12.4650169 10.9904847 10.1663346 9.6513389 8.4121858 11.7864418 0.0024969 1.8608000 1.1124000 0.0079175 0.0044411 0.0206230 0.0101460 -0.0336770 -0.6489600 -0.2748800 -0.6661500 -0.0106460 -0.0187650 -0.0120240 0.6786400 0.6238800 0.6547900 -0.0496950 0.6596100 -0.0200010 0.0038854 -0.0468540 -0.0794760 1.6546000 3.2492000 1.3293000 -0.0501000 -0.1023700 0.5592100 -0.0972320 0.0024969 -0.0442800 -0.0189020 -0.0036011 0.0186630 0.0101460 0.0348240 -0.0106460 -0.6224600 -0.6938800 0.0027745 -0.0077482 -0.6877000 0.0154470 0.0154470 -0.0040162 -0.1226500 -0.0120240 -0.0045695 0.6721700 -0.6577100 -0.0145120 -0.6500600 0.5900900 -0.6316900 -0.0098185 -0.0276710 -0.0410240 -0.0794760 -0.7223400 0.0141900 -0.1496200 -0.1393600 -0.0486130 0.0199230 -0.0985500 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 9.0213220 12.7167239 7.1741967 9.4507257 3.6506382 10.6998026 2.4579882 -0.3494192 8.2671837 7.0300127 -1.3492354 7.6965580 4.5332768 10.2694790 10.1673197 1.4580145 8.0579024 9.3449927 7.0852632 9.2542610 10.2551879 8.5754474 10.6120844 1.8205670 9.4434249 9.7895464 1.6506267 0.6506727 11.3855560 5.3648805 11.4535549 12.2510123 7.8379867 10.1564463 9.9943756 8.8054527 5.2505486 3.2944884 -0.3494192 1.2356045 8.8355101 9.5694979 10.4712126 4.5575265 4.9317776 5.3785567 10.0568397 6.6785410 8.7591592 NA 11.5909483 3.7799215 5.4961236 9.1721567 6.2664474 8.4336330 9.0726994 8.7099791 10.2393493 NA 13.4251130 0.2356045 10.8469294 NA 6.4961252 5.3510735 7.8794534 8.4221241 14.309888 4.294488 8.533278 13.961425 10.605195 10.509393 12.719833 14.626080 9.633521 11.218828 13.762422 10.692978 9.776694 7.599002 -1.349235 9.620021 12.024451 11.234423 7.474002 8.950987 9.021322 8.239349 10.557807 7.134451 6.418819 11.247989 5.581372 -1.349235 2.457988 8.043639 10.331434 9.347602 8.766979 9.609912 12.804662 9.906253 9.927341 11.099267 9.909201 9.683369 10.973689 8.906843 -1.349235 8.813970 6.411653 9.537093 11.609187 5.716725 10.849681 10.083698 7.915077 13.138286 10.105448 9.346733 12.144615 10.512497 10.447485 4.820562 TCGA-D8-A141 40 0 NA 626 breast stage x t1c n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 85.58.0 1 2 2 NA NA NA 1 4 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 2.781139e-07 8.343418e-08 11.17987520 7.71195187 6.66916712 11.00382546 0.44519698 10.48819293 0.03012416 9.86037919 11.91264380 11.23000488 9.67037299 8.13516340 8.25412962 9.83264448 6.61509108 9.69664801 10.66826231 10.19083989 8.32014707 4.39936253 10.91633273 10.44938608 11.33884634 10.62693908 9.30159108 10.47858864 8.42387604 10.24606552 -1.55469706 3.69309661 9.65948471 11.46214795 12.78383235 8.03012802 12.62787031 12.05480609 9.93651766 8.15252468 5.46753382 6.78501559 8.62880093 9.49160762 8.69309312 12.55727926 3.57445275 10.74351463 12.90100651 4.65461884 9.82822187 10.58791091 7.90459729 7.55890740 NA 14.88771391 10.85905795 3.03012416 8.32933622 NA 5.61508961 9.95097720 10.04088928 9.68476405 10.78751809 10.46545111 10.26693958 2.61508666 11.46075490 10.28436942 6.30935266 8.29847503 10.57734394 10.97971171 15.42042024 9.01369171 11.12772136 11.01975910 9.21169462 3.30315240 -0.55490899 9.13166613 9.16540977 11.19272926 0.44519698 7.74894621 7.12112215 10.03575270 11.07155910 7.55890740 7.99975427 5.80271797 10.45674230 11.74951692 -1.55469706 13.63930685 5.04508033 7.14560511 13.00095301 14.15949163 12.92595580 7.77384076 10.02259446 10.97068645 10.45083926 11.10805649 4.83748413 8.43810402 12.15822987 10.07178720 NA 10.50721170 9.18410223 1.03012416 3.60786290 10.02401002 11.26654102 10.57573616 9.14387015 14.98088143 10.14169858 10.01121971 8.47168903 2.69309661 15.51675366 9.55107414 13.29915735 12.97038052 10.19083989 9.65522802 8.37738017 10.36960694 -0.00097017 0.51194000 0.51194000 -0.00097017 -0.00097017 -0.00484610 -0.01202400 -0.00314930 -0.00138580 0.25784000 0.25784000 0.25784000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00249690 0.00249690 0.25308000 0.25902000 -0.00138580 0.00025448 0.00025448 0.00025448 0.00471900 0.00471900 0.00471900 0.00027728 -0.00097017 -0.00097017 0.00000000 -0.00097017 -0.00484610 -0.00484610 -0.01202400 -0.01202400 -0.00314930 -0.00314930 -0.00138580 0.00000000 0.00000000 0.25784000 0.25793000 0.25793000 0.25793000 0.25793000 0.00013863 0.00013863 -0.00263220 -0.00263220 0.00249690 0.00249690 0.00249690 0.25308000 0.25902000 -0.00138580 -0.26167000 0.00025448 0.00025448 0.00027728 0.00471900 0.00471900 0.00027728 0.00124810 0.00736090 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 10.790016 14.587771 6.548454 10.554670 4.880460 10.760315 4.634988 -1.554697 8.440933 9.015021 0.445197 8.249296 2.767104 10.167973 9.271714 2.145612 10.187896 9.119358 10.424591 10.530970 9.344334 7.484085 11.393715 3.837479 7.890180 10.266940 8.702553 NA 10.892249 2.904600 12.746019 12.264946 8.622585 9.612584 9.352808 9.276473 4.854554 0.445197 1.030124 7.867231 8.611329 9.032943 8.499092 4.303145 8.529283 5.693094 10.096217 6.022594 9.304700 NA 11.128160 4.730569 4.200057 9.477383 6.174854 7.152525 9.937519 9.391341 8.236329 -0.554909 13.583717 1.445144 10.239175 NA 9.080884 4.785017 7.589824 9.078161 11.433920 5.173087 8.677586 12.627870 10.661002 10.564755 12.557279 12.027072 9.189158 10.871692 13.489133 11.217068 9.165410 10.372944 1.615087 7.503157 10.763991 11.833856 5.200053 8.917857 8.812580 8.149069 10.903790 8.744374 7.881877 10.626939 6.450791 1.445144 5.239581 7.010267 12.380054 11.291635 8.927973 8.511255 10.625696 8.312444 9.684764 11.022358 10.732012 10.703143 10.920646 9.406615 5.433851 9.878746 8.288521 8.443756 11.071559 9.242017 11.326471 10.456742 7.321683 13.917222 9.919379 10.330862 13.073554 10.940021 10.008362 2.904600 TCGA-D8-A142 74 0 NA 425 breast stage iib t3 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.491682e-06 6.244252e-07 11.77625606 5.25727469 7.96233154 11.36347456 0.67228955 10.45558378 -1.91267295 9.40419723 11.25492509 7.74198599 9.58420395 8.71943640 8.11663715 9.73570765 6.04154745 8.24469729 8.79815650 10.19554790 9.67746931 2.94532678 10.26912352 11.89218699 12.98212055 9.75001855 9.77778462 10.41798697 5.82205962 10.75046347 -0.32771045 1.40925515 8.54985242 14.03786047 11.86768485 7.67043319 12.54145661 11.54665369 9.74912828 4.93284072 0.40925515 6.49249095 8.66666607 16.67337991 7.64768291 11.22257842 -1.91267295 11.13362151 9.76110090 6.15343854 9.90009696 11.40716338 8.72488079 2.73120497 -0.91267295 13.82602932 10.15880910 2.54678336 9.53236489 -0.91267295 6.71670699 9.31195489 10.03498709 9.58520199 9.74109093 9.30772837 11.01494293 1.25725205 10.96060199 10.26071493 3.61091262 7.18010707 2.08736100 8.11663715 16.09636955 7.44905288 10.97476117 10.93695073 9.70848627 2.33528315 -0.91267295 8.41153048 9.02986474 11.17249058 -1.91267295 6.42720053 7.26725955 9.70619450 10.32694872 6.18538292 6.31135234 5.58719695 10.16783459 11.48902967 0.40925515 13.95320421 5.33527601 6.89470501 11.67969037 14.63000419 12.52197836 7.66666642 12.81638663 10.76661032 10.76759753 10.70825726 4.01809110 7.86048923 11.31496610 9.85966476 3.99424481 10.48609378 9.36579969 0.08732705 5.38472332 10.14432646 11.36797594 9.68260753 8.69097644 15.29901983 10.23264553 9.97113900 7.57920353 5.87525173 13.33193696 8.29192121 12.89561048 11.51164766 9.79384615 9.23455497 7.93909902 10.19131318 0.6559000 1.2154000 0.6935300 0.0013868 0.0013868 0.0000000 0.3122500 0.7137700 0.1064300 -0.4179400 -0.0324500 1.3954000 2.1310000 -0.3981900 1.8547000 0.3539800 0.3539800 -0.1866000 -0.1866000 -0.1546400 -0.3936200 -0.4410100 0.0423510 0.0423510 0.3569900 -0.0521260 0.2006000 0.1954000 0.6667800 -0.2150300 -0.1930000 -0.1067300 0.0013868 -0.2638600 -0.0642240 -0.4318100 -0.4318100 0.7137700 0.1064300 0.1064300 0.6360900 -0.0175290 -0.4269000 -0.0597410 -0.0597410 -0.0597410 -0.0597410 -0.3883900 -0.4534000 -0.4378900 0.4627300 -0.1866000 -0.1866000 -0.1866000 -0.1351200 -0.3936200 -0.4363700 -0.2111900 0.0423510 0.0423510 -0.3344500 -0.0521260 0.2006000 0.2409300 0.0161460 0.2510500 1.972 -0.429 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.315 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 1.972 -0.429 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.315 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 9.2560223 14.4176893 4.9942403 10.0024826 1.6723348 13.5250372 2.1748218 8.6732515 8.9367551 7.8882501 8.7294019 8.8290193 1.2572521 10.4299805 9.0480762 2.3352832 8.0574562 11.1235237 9.1694991 9.7451151 8.9576839 7.6741901 12.9092238 2.7877877 9.4427012 11.0149429 5.0180867 NA 10.8860245 1.0873271 12.9268000 12.3883461 11.9723791 10.1527663 7.6438562 9.5966303 2.8947014 2.8422347 -1.9126729 3.7312050 8.7843178 9.8212129 5.9577150 4.5302955 9.6199690 7.4205051 9.8041696 6.4882290 10.1668349 7.7239749 12.5491493 3.6419390 4.5630849 9.6389816 5.3100019 8.5157105 9.1412759 8.4514848 10.0433632 0.6722896 13.3049671 0.8946820 10.7509083 NA 9.3529653 5.1097199 8.3376487 8.7998770 11.0746141 7.0646296 8.3329030 12.5414566 9.2821071 10.6588658 11.2225784 10.4101233 9.3361968 10.2922269 13.2218166 9.5313296 9.0298647 8.6956048 -0.3277104 7.9344074 11.0648090 11.0808193 5.7239735 8.6816748 9.4623896 8.8716007 9.9618398 6.6534040 5.9202409 9.7500185 6.9972427 7.3564766 9.2949747 8.2199782 13.0891981 10.4030658 7.8152706 8.4978016 9.1594826 8.7410908 9.5852020 10.0563768 11.6197061 11.0095629 10.4553109 9.5467818 -0.9126729 9.9885866 7.8087911 9.4574925 10.3269487 8.4742904 10.7992730 10.1678346 6.8603570 13.6527498 9.9745708 10.2706754 12.4987287 10.9359730 9.7203453 4.1534406 TCGA-D8-A143 51 0 NA 431 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 4 3 4 NA 1 3 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 1.39057e-07 11.9625265 2.8454901 6.8643583 10.8812383 -0.4023973 8.9693477 NA 9.5827014 12.0913015 5.9194998 8.9671686 7.0405144 8.4740880 9.3731814 7.4272936 9.2122809 9.7805862 11.5769963 7.7447760 6.6087989 8.5691147 10.5637160 13.9696880 11.7047882 9.6609662 11.2244209 6.2196235 11.2513052 -0.4023973 -0.4023973 7.7849234 12.2869140 12.3136403 9.4041208 11.7754578 10.6720471 9.5044617 5.0405155 1.1825652 6.6743872 9.2030506 7.0363627 7.0363627 11.7257266 NA 9.4501006 8.4710151 7.8431240 10.5799587 10.7044612 10.0894243 4.0238320 2.2980131 14.3181406 10.7993887 0.1825652 9.6309942 -1.4023973 6.2049017 10.1974839 10.7336010 10.1716916 9.1230919 10.0631375 9.4847917 0.5976027 10.5393524 9.9240007 4.9726099 8.2682276 13.6647954 9.8655282 14.5939122 7.2458569 11.5098991 11.5452081 10.7412732 1.7674853 4.5517682 9.4161534 9.3126752 11.9424218 NA 5.0405155 6.3591223 10.0595621 11.1923622 8.9877401 6.0813865 3.5517621 7.7599627 12.4222316 2.6850431 13.2209954 5.9374221 7.2414274 10.4633044 13.7093996 12.6394869 8.8898927 11.2803463 10.9096032 10.4092549 11.2934519 4.2414284 7.8620137 11.5218269 8.6185511 NA 10.2535490 9.5201555 -0.4023973 3.7231435 9.7274981 8.5919247 10.9655319 9.2744098 14.3620022 9.7612208 8.5238673 6.3457636 -0.4023973 13.2081346 8.6797201 13.0276316 11.6044231 10.5812773 10.6538702 8.1825334 10.5416572 0.5491200 1.5690000 1.5690000 -0.0328600 1.3063000 0.0041632 -0.0698670 1.2793000 0.6437800 -0.7293200 0.2538500 0.2593400 -0.0656950 -0.0404860 1.1795000 -0.0989450 0.0000000 1.4065000 -0.3638600 3.6569000 0.3551200 -0.4097000 0.5380100 0.5380100 0.5380100 0.2150700 0.4026600 0.3325400 0.7294300 0.5491200 0.5491200 -0.1522100 -0.0552040 -0.1634700 -0.0806740 -0.6808600 -0.0246610 1.2793000 0.6437800 0.6218100 0.3352900 -0.1074600 -0.7293200 -0.6847800 -0.6847800 -0.1568500 -0.1611500 -0.0404860 -0.0404860 -0.3670300 -0.7359100 1.4065000 -0.3638600 -0.3638600 -0.6981200 0.3551200 -0.0434940 0.8812600 0.5380100 0.5380100 -0.0275350 0.3562600 0.3325400 0.7294300 0.0077783 -0.1132500 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.186 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.324 0.000 -0.475 0.254 -0.685 -0.157 0.125 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.186 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.324 0.000 -0.475 0.254 -0.685 -0.157 0.125 8.3887341 13.4125541 0.9195308 9.3390380 4.5796508 12.1531189 2.4049304 7.3557942 8.9474052 7.1483179 1.9194926 7.0432067 6.4367748 11.0667042 8.5400858 6.0322000 6.6956028 10.7070754 9.9206259 10.4201419 9.1463833 7.0363627 10.9396458 1.5975550 8.7034797 9.4847917 2.4049304 NA 10.9033479 4.2980131 11.5517675 13.2371380 7.2735280 9.6683629 8.6378609 10.2141199 5.6743872 3.5975669 NA 8.0048390 9.2360070 8.6876836 9.1512005 2.8454901 9.0804397 6.6474196 10.6720471 5.0733061 10.4328321 1.4049031 12.3342902 2.8454901 1.4049031 9.1805410 7.0037765 7.9149836 9.0048390 8.0196358 9.8800804 4.1521591 12.7579941 0.9195308 11.5492201 0.1825652 9.5968666 3.8070251 8.7422293 7.7113132 8.970131 10.347859 8.464850 11.775458 10.268019 12.175826 11.725727 7.245030 9.453218 11.591571 12.786392 9.316104 9.312675 8.369061 1.182565 8.298011 11.162435 11.397055 6.498438 9.125048 8.968258 10.038959 10.368706 6.065176 6.845499 11.704788 8.626859 1.182565 11.614031 10.398984 13.138426 9.396853 8.552553 8.845499 8.825187 8.362443 10.171692 9.758703 11.719590 10.801225 10.630994 8.275291 10.195624 8.381600 7.002116 8.825187 11.192362 4.826391 10.194693 7.759963 8.259616 13.743225 10.569115 10.154077 13.042068 11.747318 9.316960 3.641962 TCGA-D8-A145 80 0 NA 410 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 85.58.0 8 2 2 NA 2 2 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.946798e-07 11.2654173 8.9715947 7.2492443 11.8112237 2.8607443 11.0133153 1.2757818 10.6152652 12.2512761 10.5382728 10.1296157 7.9576105 9.4523751 9.6486513 7.4490471 9.5355297 11.3628071 9.6745300 7.7888560 -1.3090019 10.9187406 9.9274361 13.7317128 10.4717737 9.6237767 10.7410126 5.4981775 10.4811682 1.6908193 1.0127832 9.1451231 12.7418628 12.8502222 7.4819867 12.7996749 13.5789011 9.9154284 6.1337669 3.3346827 7.7159634 9.0723668 9.5141911 7.9482119 12.9467376 2.0127474 9.9387513 13.4900042 6.4787259 9.1040182 10.9069634 8.5300274 6.6333382 -1.3090019 13.1442944 9.4246866 2.1502672 8.7716413 NA 6.3843106 10.7135384 10.0820675 9.5581025 11.4882827 10.3454598 10.0127519 3.3912591 12.2842149 10.7602736 6.7461058 7.3773242 10.7983679 11.0696606 14.7320124 8.4286118 11.7240747 11.5173723 7.9268380 1.8607642 6.0571470 8.8329308 9.4457114 11.8970751 NA 4.0127564 7.1254517 9.5977144 11.1548590 6.4523747 6.0483757 4.6450214 10.1002147 11.8027745 -0.3091807 13.0058318 5.4981775 7.7433918 11.7357302 11.4373381 13.0943019 7.4819867 9.6929356 11.0104959 10.7381352 11.8218769 5.6096870 8.9399373 11.4965677 11.7020511 0.6908193 10.3786369 9.1866788 1.0127832 3.9177182 9.7921430 10.5213391 9.9739121 9.7494920 14.7429673 10.2925946 9.7173472 8.2720246 3.6908193 15.5908415 8.1461511 13.2456525 11.9402336 10.2020823 9.5977144 8.6666717 10.2954558 0.08739000 0.08739000 0.08739000 0.00055459 0.00711490 0.01237600 0.00847430 -0.17962000 -0.17962000 -0.19950000 -0.19950000 -0.19950000 -0.04429000 -0.04429000 -0.19887000 -0.19887000 -0.19887000 0.00013863 0.00013863 -0.36658000 0.02927300 -0.00968060 -0.21553000 -0.21553000 -0.21553000 0.15188000 0.15188000 0.15188000 0.43243000 0.08739000 0.08739000 0.00694350 -0.41355000 0.01237600 0.01237600 0.00847430 0.00847430 -0.17962000 -0.17962000 -0.18446000 0.00000000 0.00000000 -0.19950000 -0.20386000 -0.20386000 -0.20386000 -0.23401000 -0.04088800 -0.09052300 -0.19887000 -0.19922000 0.00013863 0.00013863 0.00013863 -0.36658000 0.09072000 -0.00968060 -0.21280000 -0.21553000 -0.21553000 0.00416320 0.15188000 0.15188000 0.43243000 -0.21231000 -0.20784000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.260 0.047 -0.216 -0.216 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.260 0.047 -0.216 -0.216 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 9.7676394 12.3875740 6.1665568 10.0884985 4.6215596 10.9042319 3.4981743 -1.3090019 8.4981787 8.3843106 -1.3090019 8.7870383 3.2143891 9.7716413 9.9202436 1.0127832 10.3224556 9.9529187 9.4212940 9.6442927 10.0862883 8.6623675 10.8519557 3.4457135 8.6709635 10.0127519 3.8607443 -0.3091807 10.2767252 3.8201075 12.6281976 12.0851525 8.2396458 10.0412105 7.2944498 9.1461511 4.3912659 1.2757818 1.2757818 6.6851777 9.0161294 9.0702023 9.1776587 6.1420356 8.7723740 6.6738179 10.0031395 6.7515200 9.4498797 0.6908193 12.7580060 3.8607443 4.9576082 9.4519345 6.4713956 8.1440943 9.1223215 8.9027122 10.0317865 1.0127832 13.6989898 1.0127832 10.5472493 NA 7.6304033 6.4656105 7.5363141 9.0636890 13.490510 5.182676 8.855731 12.799675 10.113940 10.324273 12.946738 13.554284 8.978536 11.156900 12.967748 11.001153 9.445711 7.233855 3.976226 7.794112 11.684116 11.2547350 7.2907368 9.1604657 9.1876777 8.3201805 10.8590917 7.1866788 9.4507121 10.4717737 6.9991623 2.3912728 6.7020508 7.1316934 12.7302570 10.2939864 10.1023348 8.1806715 12.7300856 9.6267255 9.5581025 10.3342291 11.3727211 10.0138786 10.6537198 9.4965676 0.6908193 9.3734409 6.8801541 9.3981830 11.1548590 7.3238186 10.8917224 10.1002147 7.9268380 13.9320994 10.1766531 10.0356745 12.6071698 10.9121088 9.9440804 3.3912591 TCGA-D8-A146 57 0 NA 643 breast stage iia t2 n0 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 5 2 3 NA 2 1 3 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.112456e-07 11.07290126 8.03350560 8.01971859 11.32892491 0.50994915 10.82424334 -0.49005085 9.91880377 11.79201824 10.28308256 9.92779588 7.96115447 8.73755934 8.81600507 8.07409275 8.99174291 10.66602645 9.95029343 7.74356276 4.61846773 10.71267943 9.66412867 13.48601518 11.02785874 9.24803571 10.75519897 5.34283205 10.53576808 -0.49005085 1.83187724 9.31488116 12.88613661 12.38847333 8.15740201 12.10950758 12.86122772 9.82735604 7.19293781 3.83186711 6.72911223 8.54611697 9.82509298 8.54336635 13.05611437 2.75787666 10.55843028 13.42007077 6.94457152 9.04375980 10.70254440 9.04327314 6.69976815 -0.49005085 13.89443542 9.24041356 2.75787666 7.81600507 0.09491165 5.44067984 10.29621304 10.48758111 9.57535942 11.17283426 10.35032795 9.77145068 2.59741199 12.19063254 10.18898352 6.68486922 7.95702657 3.67986289 11.71084198 14.75114451 9.20194844 11.18015700 10.89256741 8.66729040 2.31730407 5.21038497 8.18413546 9.59607959 11.33529974 -1.49005085 6.99375926 6.95702657 9.41608244 11.20864802 7.75311711 6.29784620 5.15380128 10.32131809 11.69031879 3.31730407 13.77280900 6.18236853 7.59740603 12.52439979 12.88457537 12.87735813 7.79303164 10.38722746 10.74535928 10.53363187 11.06716771 5.53231072 8.60402090 11.99464043 11.29068819 NA 10.38454062 9.02662829 1.09491165 3.90603434 9.57333855 10.22676283 10.10706482 9.32772643 15.11692685 10.46922085 10.03448508 9.23360434 4.36792315 15.29082912 9.32452576 13.64099647 11.93673226 9.90172402 9.61781437 8.70715997 10.68600741 -0.1987500 0.6507500 0.6507500 0.0576530 0.0576530 -0.0175290 0.2807400 0.0459910 0.0459910 0.0478360 0.0478360 -0.4950700 -0.0646330 -0.0166530 -0.0262100 -0.0262100 -0.0262100 0.0111210 0.0111210 -0.3009800 0.2689100 -0.2067200 -0.5045300 -0.5045300 0.0655130 0.0086135 0.0086135 0.0086135 0.3071300 -0.1987500 -0.1987500 -0.1761300 0.0576530 -0.0175290 -0.0175290 -0.2882200 -0.2882200 0.0459910 0.0459910 0.0459910 0.2934200 0.2864400 0.0478360 0.1637400 0.1637400 0.1656500 0.1736200 -0.0166530 -0.0095426 0.0102850 -0.0262100 0.0111210 0.0111210 0.0111210 -0.3009800 0.2689100 -0.2067200 -0.3005400 -0.5045300 -0.5045300 -0.2486100 0.0086135 0.0086135 0.3071300 0.0036076 -0.2393600 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.269 -0.207 0.546 0.257 -0.505 0.000 -0.253 -0.253 0.000 0.000 -0.199 0.452 0.307 0.307 0.000 -0.239 -0.176 -0.176 0.000 0.000 0.000 0.000 0.239 0.239 0.000 0.000 0.293 0.293 0.000 0.000 0.164 0.164 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.269 -0.207 0.546 0.257 -0.505 0.000 -0.253 -0.253 0.000 0.000 -0.199 0.452 0.307 0.307 0.000 -0.239 -0.176 -0.176 0.000 0.000 0.000 0.000 0.239 0.239 0.000 0.000 0.293 0.293 0.000 0.000 0.164 0.164 0.000 9.39258640 13.95321072 7.00978944 10.10006254 3.95454065 10.51907214 4.12465072 1.09491165 8.24634538 8.74954198 NA 8.50194702 1.83187724 9.84644991 9.33410654 1.50994915 8.95288682 9.64821519 12.15379957 10.35347195 10.06902408 8.41533024 11.26106897 3.36793014 9.95495818 9.77145068 3.96937155 -0.49005085 10.56285096 3.41683974 12.42750194 11.90360198 8.40324471 10.06357264 8.10613314 8.90118700 4.73876243 0.83187724 1.83187724 2.09491165 8.67610659 9.48435789 10.12970481 5.65969056 8.76257339 6.48148624 9.52256800 6.63406465 9.54061047 0.09491165 12.09185005 2.90226657 5.66981482 9.77622624 6.18109460 6.78606832 9.05394190 8.89472714 7.09114444 -0.49005085 13.19644391 0.83187724 10.58174093 -1.49005085 7.43475581 5.39258533 8.17350125 8.41983633 13.324526 5.521170 8.646934 12.109508 10.182811 10.654602 13.056114 11.947565 8.873717 11.018729 13.329574 9.094906 9.596080 8.878450 NA 7.349147 11.442712 11.3160902 7.2714948 8.8652944 9.0374204 7.4347558 10.6970851 7.2344573 8.8784498 11.0278587 7.0491025 2.5099491 6.1609948 6.4768806 11.7586122 10.4172096 8.5211705 8.5474903 11.7074672 6.9108226 9.5753594 10.5113516 11.3189076 10.0869000 10.6801814 9.4957853 0.5099491 9.6298118 8.4573173 7.5071231 11.2086480 8.5597920 10.8710153 10.3213181 7.1823685 13.1133959 9.9314823 10.2585556 12.3228226 10.4648666 9.8647438 2.5974120 TCGA-D8-A147 45 0 NA 584 breast stage x t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.983365e-06 7.284961e-07 12.222544764 1.883503519 6.741485863 11.892569720 0.009060468 9.397052718 2.009024626 10.081837977 11.922298883 8.288258884 9.893714711 8.218488648 9.966137557 9.483417369 7.145172016 9.850337664 9.891678459 10.717544570 9.507552255 7.482064944 10.663671505 11.087631035 13.060471017 11.596656739 10.695536028 10.786016766 6.263276713 11.891412313 3.330959889 2.671995298 9.720415627 12.446440769 12.756459229 9.009974419 12.031981169 12.487805071 9.938786984 6.790395418 4.573822875 10.380449160 9.426888040 12.922610566 7.889639633 -0.575830351 -0.575830351 11.041081205 6.982493962 10.960805837 8.802367726 10.993216513 8.490162149 6.490162550 -0.575830351 14.375387502 9.741027538 4.746000973 8.834524459 0.424062125 2.593999074 9.734117689 10.695827782 9.149439244 9.130569018 10.249826800 9.796393991 10.208707821 11.636265352 10.851385824 5.727852401 7.460246183 0.424062125 8.623745442 14.740955490 8.751715432 11.173523428 11.121909294 11.012319138 3.781621998 -0.575830351 10.947879948 9.714091794 10.944446115 -0.575830351 3.124510115 7.690859838 11.211159282 11.793124987 5.672000957 7.107067436 8.288258884 8.803451471 12.604292951 2.883503519 12.882671819 5.593999074 6.484768125 12.004920362 12.613665905 13.826718665 7.409915303 10.492515382 10.895494171 11.031731524 11.730846726 5.241439803 8.303656105 11.984525233 9.837700933 -1.576045406 10.818803597 10.214014034 1.883503519 4.995597578 10.127976529 11.751064141 10.586464244 10.388413864 14.553677971 11.200300320 10.453360157 7.327954971 8.483417571 12.062395736 5.867016745 12.856810585 11.557215158 10.666949341 9.862345070 8.492851416 10.717268658 1.058100 1.328200 2.938100 -0.377020 0.042227 -0.442380 -0.404240 0.026013 0.882350 0.612520 0.612520 0.612520 -0.020353 1.088200 0.107810 -0.463930 0.018257 0.522310 -0.067533 0.033611 -0.067131 -0.080616 -0.461400 0.436730 -0.430240 0.328250 2.639100 -0.106120 0.502110 -0.041779 1.058100 1.434400 -0.377020 -0.495330 -0.201560 -0.866370 -0.421290 -0.424790 0.882350 -0.371950 -0.239310 -0.042322 0.421070 0.000000 0.000000 0.000000 -0.503240 1.088200 -0.224350 0.107810 0.807420 0.522310 -0.067533 -0.067533 -0.864490 -0.428500 0.388400 0.020544 -0.401580 0.368780 -0.063913 -0.485920 -0.535970 0.502110 0.919540 -0.035389 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.181 0.000 0.000 0.613 0.000 0.000 -0.213 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.181 0.000 0.000 0.613 0.000 0.000 -0.213 8.224972633 13.453834675 5.970966360 9.914923837 3.124510115 11.175198533 -1.576045406 4.205431614 8.492851416 7.697868321 9.342190701 10.920542299 4.763921421 11.121257773 9.459559488 5.282054244 11.606777683 10.414886037 6.418426104 8.623745442 9.233567911 8.252209374 10.770863643 2.816394909 9.422663381 9.796393991 0.424062125 -1.576045406 10.064769840 1.593975179 13.068323586 12.142926862 8.163853425 9.596500443 12.528753607 10.226185414 5.993927921 3.947638107 -1.576045406 6.412757819 8.283607908 7.244251555 5.754989022 4.816389789 8.739992527 6.935825090 9.947144804 5.923919300 10.248633976 0.009060468 12.664342568 3.178953610 4.330967058 9.258678383 6.375065504 4.993927921 8.376814331 7.852433379 5.947635769 4.947633432 13.516788815 0.745968715 10.562664771 -1.576045406 10.372805219 4.746000973 8.964201068 7.479355071 9.5597822 9.9743387 8.0570684 12.0319812 10.6655438 12.2372529 -0.5758304 10.8924425 8.8012835 11.8882358 13.6518769 11.4068883 9.7140918 8.8886188 1.7460117 7.5352085 11.4648764 10.7474092 3.7816220 9.0183974 8.9476349 10.0543400 10.1752194 7.6672471 4.0964980 11.5966567 9.7054235 0.4240621 8.2442520 9.6254373 13.3489318 10.2561718 8.0534296 8.2249726 8.9948775 6.8419253 9.1494392 9.7594633 11.9286437 11.0511508 10.4159491 10.3680528 -0.5758304 9.8656270 7.1137567 5.9554546 11.7931250 6.7728015 9.8146020 8.8034515 8.6920299 14.4385076 10.1566643 10.9867924 13.3524525 10.6347443 9.4443585 1.7460117 TCGA-D8-A1J8 77 0 NA 431 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 109.61.0 NA NA 3 3 NA NA 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 1.727576e-05 4.926021e-06 10.1100613 1.4536493 8.6155241 9.9916312 NA 10.7498644 1.8321609 10.8083266 11.3817106 7.2865263 10.2542128 8.0902612 7.7628856 8.8998925 6.5663372 10.1114908 9.7979324 10.8005933 7.9614312 6.8932591 9.3837825 8.8562223 13.9269109 11.2431701 9.7845534 10.6285621 7.1485162 10.4726711 0.1317212 NA 10.0143514 12.1242927 11.8528075 7.2058499 10.4804365 13.2961046 8.0234921 6.1317088 3.2609891 5.3984940 8.7845534 9.4963902 5.6939497 13.4113914 NA 10.3420752 13.3765181 5.6630884 9.4008350 10.6882144 7.2661344 4.9518861 NA 13.2990979 10.9379095 -0.8682788 7.1761023 NA 3.8041362 10.3710085 11.8155802 10.0753220 11.6651597 11.3376543 9.0924342 0.9390761 11.9853103 9.5373817 2.6552602 8.0609666 -1.8682788 11.2003187 13.5908197 8.3186151 10.9951203 11.0552216 9.3072580 -1.8682788 3.6235626 8.2138576 9.0066896 11.6746193 NA 6.0974928 6.1485173 10.1064814 11.1832572 7.4826474 8.1910528 4.8459516 11.0496398 11.9202228 3.4536361 13.5897304 4.6552717 7.6708672 12.1223442 11.7821992 13.5017146 6.9865770 9.7152612 11.1010948 10.7487166 10.6594297 4.9261228 8.0234921 11.7761280 10.1285348 -0.8682788 9.5834347 9.1324126 -0.8682788 3.2246732 9.5926760 10.7615202 10.4046296 9.5931877 14.9509145 9.4654227 10.2326991 8.2284233 2.1317212 15.4937977 7.9989869 13.0034211 12.4454417 10.2770037 8.5175706 8.6414832 9.4129140 -0.38638 0.38122 1.11930 -0.39708 -0.39708 -0.39908 0.40361 0.35692 0.34866 -0.22207 -0.22207 -0.22207 -0.39553 -0.39553 -0.27019 -0.27019 -0.27019 0.39263 0.37718 -0.39930 0.39330 -0.38587 -0.39118 -0.39118 -0.39118 0.37314 0.37314 0.37314 0.42536 -0.38638 -0.38638 0.34648 -0.39708 0.41329 -0.40549 0.40361 0.38287 0.35692 0.34866 0.34876 0.38634 0.38634 -0.22207 0.39363 0.39363 0.39363 0.39363 -0.39553 -0.39553 -0.26829 -0.27019 0.39263 0.37718 0.37718 -0.40451 0.39330 -0.37909 -0.37932 -0.39118 -0.39118 -0.38392 0.37314 0.37314 0.42536 -0.39241 -0.38302 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.063 0.450 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.063 0.450 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 8.3831906 12.4685635 7.4055040 8.7961555 1.3048615 10.7594702 0.4536493 -0.8682788 8.0158789 8.3460274 NA 8.6893729 1.8321609 10.9526851 9.1951035 -0.2833163 7.3215331 9.9538808 10.6764313 8.2571219 10.2920619 9.0888105 9.5277778 2.2191840 6.7464176 9.0924342 0.4536493 NA 8.5673785 2.9896840 11.8731753 11.3647287 8.1189722 11.1570210 9.0734896 9.4637448 4.1977946 2.5240135 -0.8682788 -0.2833163 6.8865953 5.4626250 10.7124380 1.4536493 6.1154432 3.9646019 9.7025128 6.0683462 9.0617063 NA 11.1448565 4.4536361 4.2609891 10.6908607 5.2085251 4.8596267 9.2018294 9.0631845 4.3215313 -0.8682788 13.7738164 -0.8682788 9.4826474 NA 7.6552702 2.6552602 9.2402327 7.8664178 12.3863576 7.3289253 8.2558297 10.4804365 10.1852406 11.5167618 13.4113914 10.6528180 9.4217272 11.2336840 13.4674476 8.4171107 9.0066896 9.3760722 0.9390761 7.3041359 11.4104482 10.661383 7.508919 9.814703 8.997442 9.292840 10.794895 5.541100 7.929370 11.243170 5.804134 1.716684 7.355710 7.976289 10.412479 11.415520 7.761065 6.062446 11.976806 7.011292 10.075322 11.206352 11.901856 8.796155 11.064661 9.522952 2.038612 8.152980 10.427061 6.192403 11.183257 7.906496 10.194092 11.049640 7.343597 12.574069 10.447707 10.962818 12.104688 9.982676 10.217181 1.131721 TCGA-D8-A1J9 48 0 NA 532 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.850622e-06 1.491682e-06 11.47532833 4.25549318 6.01986868 10.86454902 -1.93456555 9.89579125 NA 10.17288925 11.72321399 9.48721118 9.96842416 7.53327755 8.09633935 10.40106254 8.47187718 9.88585116 10.67969183 9.72878547 7.55351257 4.63552805 9.82639213 10.04044535 14.24857087 10.27116010 9.84907977 10.58112571 4.69503058 11.15857302 NA 0.87302570 8.99048466 12.48865677 13.13566735 6.90487543 17.47726803 12.84820979 8.44179759 4.62026382 -0.34941924 5.80038225 8.64404481 6.69138062 7.55351257 13.38721283 -0.93428984 9.77216823 12.40399078 6.76263982 9.14502371 12.11756087 8.13445045 5.73809767 0.65067266 14.44454855 8.89777105 2.65062672 8.09357813 -0.93428984 4.97256400 9.42377396 11.07777293 9.29208439 11.22270327 9.76220512 9.58481710 3.89856632 11.27497328 9.94716863 6.48773715 8.80460894 NA 9.84374930 14.73545695 7.58428608 10.90369427 11.59021393 8.31241287 0.87302570 6.05435795 7.47506299 9.69912162 12.35741851 0.06571016 7.01986868 7.37401093 8.54848017 11.41661140 5.11006669 7.10733113 4.70952776 10.65368409 11.58530848 3.45798820 13.78869315 5.32306017 7.22049055 12.18209740 14.22209112 12.94036547 6.80038225 10.98397647 11.15031456 10.38022435 11.04098282 4.87302570 8.27634359 12.32232320 8.41440026 -1.93456555 9.95669646 9.62265715 2.65062672 2.53945663 10.04474013 10.32276540 9.74647133 9.56252597 15.62457120 9.64310110 10.05186976 8.11006617 4.94831583 16.44221311 11.46174177 12.62868970 12.38456803 9.17484980 9.20650208 8.56352387 10.08136599 0.0308730 0.6712200 0.6712200 -0.5444600 0.6282500 -0.0941030 0.1355400 0.0467000 -0.3155200 -0.4980900 -0.7837800 0.5027300 0.0362290 -0.2314100 -0.5963300 0.5647200 0.6178800 0.0461330 0.0461330 -0.2495800 0.0570830 0.0852210 -0.6140300 3.6569000 -0.0677260 0.0000000 0.0000000 0.0000000 0.0539480 0.0308730 0.0308730 0.0757030 -0.5769400 0.0134920 -0.0941030 0.0048579 -0.0013858 0.0467000 -0.3155200 -0.0076101 -0.4896300 -0.0514510 -0.7983600 -0.7107800 -0.7107800 -0.8542400 -0.8921200 -0.2314100 -0.2314100 -0.6155600 -0.6124900 0.0461330 0.0461330 0.0359470 -0.2495800 0.0570830 -0.6047700 -0.6071900 -0.6252200 -0.5991700 -0.9848500 -0.0147780 0.0000000 -0.6565900 -0.0857220 -0.0744090 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.506 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.506 8.94831525 13.07847132 6.78677146 9.11824031 2.03005352 12.23152136 1.06564124 -0.34941924 8.15048047 9.41163174 -0.93428984 7.25029937 3.79359421 11.06708043 8.88903937 1.97254562 6.73100805 10.43908119 11.10527677 11.19302175 9.51252281 7.54948821 10.93121220 2.52509166 8.29809328 9.58481710 0.06571016 1.76612867 9.72566806 3.35107704 11.42597063 13.28555918 7.55351257 10.32306005 9.75479666 9.06919007 6.37855497 1.52511672 -0.93428984 2.15312435 7.85357467 9.01768534 11.50082157 2.52509166 10.12596616 6.82722328 9.68772402 7.29689327 9.24122169 NA 10.78933320 3.45798820 3.15314057 9.69308302 3.95392636 2.58923616 9.15710765 8.66465527 4.25549318 -0.34941924 13.27482093 0.06571016 10.03936956 NA 7.52510419 4.52510419 9.44234038 8.38647256 12.45895877 6.73809767 8.74162911 17.47726803 9.76611194 10.77798429 13.38721283 10.39994554 9.74902216 10.82680785 12.85474730 8.43308714 9.69912162 9.21985751 0.06571016 7.70410837 11.24573677 12.45207364 6.14782156 9.31537829 8.27024346 8.14550373 12.40755099 6.34644282 6.66186216 10.27116010 6.59705437 0.06571016 6.51275468 7.21486015 11.65192561 9.34005036 7.01695645 7.40329414 10.04581180 4.69503058 9.29208439 10.39854790 11.42184903 9.32894145 11.73677093 9.19237666 4.49193645 8.50157170 7.61820708 3.70953327 11.41661140 8.83054373 11.78202119 10.65368409 7.51068743 13.32589346 10.30973872 9.89539503 12.34738496 10.80587460 10.53683933 0.87302570 TCGA-D8-A1JA 60 0 NA 502 breast stage x t4b nx m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 109.61.0 NA NA 3 3 NA NA 2 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 1 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 7 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2.35894e-05 6.521774e-06 10.6920818 0.1155660 8.0043407 9.8055954 NA 10.2976814 NA 10.9087943 11.1445395 6.5334497 10.2355112 7.9766844 7.6644196 10.7556163 6.5994130 10.1257758 7.4687446 10.5600947 8.0581119 5.0224877 8.5780998 9.3893930 14.8536105 10.1067650 9.6396493 10.8545342 4.3444166 11.0191027 NA -0.8844340 9.0748749 11.3541515 12.9060478 9.3853085 15.8847767 11.9524368 8.3347658 5.8704856 3.7005618 4.8160364 9.5392387 6.6967979 6.5376626 13.3178361 -0.8844340 8.8494601 11.6528158 3.4731505 8.6489274 10.8045033 6.8229570 8.2030602 -0.2993827 12.9774370 9.5338454 1.4375474 7.4993014 -0.8844340 4.0697967 10.9655889 11.1500525 10.1800034 10.9595185 12.3461433 8.9229524 -0.8844340 11.5342407 8.9508583 1.7005729 7.8125650 4.1155993 10.9158907 13.6488055 6.5952963 10.6044418 12.3787199 8.6892446 NA 6.4056163 8.7403930 10.0012938 11.7702335 -0.8844340 5.8637898 6.5164769 8.4532192 12.0685206 5.8837821 6.3299165 4.8837821 10.7014989 11.4963291 -0.8844340 13.9329559 3.6074487 6.1268242 11.9198293 13.0939951 13.5179101 7.1708795 9.8452183 11.0174071 9.4172308 10.7966162 4.4010024 7.9469045 12.7787664 11.0160869 0.4375474 9.5719519 9.3256598 0.4375474 1.9239858 10.4936213 10.1341453 9.8738207 9.4358338 14.7713518 9.0005311 10.5811639 8.0581119 1.7005729 15.8460742 8.4009998 12.8710588 11.8260810 9.6892446 9.7919954 8.7924360 10.1162067 -0.00664320 0.68666000 0.72830000 0.00624810 0.00763920 0.96227000 0.02693500 0.00913300 0.00913300 0.01070300 0.01070300 0.01070300 -0.00083160 -0.00083160 0.00848550 -0.00097017 -0.00097017 0.00000000 -0.00567570 -0.74273000 -0.00180140 0.70064000 -0.01807800 3.65690000 -0.02137300 -0.03827100 -0.03827100 -0.03827100 -0.00774820 -0.80053000 -0.00664320 -0.75952000 0.00624810 -0.78041000 -0.74133000 -0.76954000 0.01279500 0.02834100 0.00913300 0.00913300 0.00833510 -0.76740000 0.01070300 -0.75892000 3.28650000 -0.00519910 0.01950300 -0.00257140 0.04429000 0.00337330 -0.78623000 0.00000000 -0.00567570 0.00263570 -0.74273000 -0.00180140 -0.01340200 0.00930980 -0.78732000 -0.78387000 -0.76252000 -0.03827100 -0.03827100 -0.00774820 -0.00097017 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 -0.106 6.5036143 12.4952466 6.2345377 7.7192238 2.8160467 11.1275235 0.1155660 NA 7.1735892 9.3581762 NA 9.8846997 1.1155660 10.8604313 8.6958560 -0.8844340 5.1155993 9.9365742 11.6041908 7.4819197 9.0099680 8.6233921 9.5334500 1.2855206 5.7880227 8.9229524 0.1155660 -1.8841677 10.9747440 0.4375474 11.1346669 12.2761780 9.2371311 10.7483655 10.0232393 8.9967113 7.1816870 1.1155660 0.7005285 -0.8844340 6.1599924 5.2448794 11.5208719 1.1155660 8.3295398 4.4554456 9.2299904 6.6273500 9.9333805 NA 8.2742071 5.0697924 2.6391627 9.8520374 6.3800870 4.2653469 8.3299165 7.7950773 2.5750218 NA 13.1380086 -0.2993827 9.6014267 NA 7.7773757 3.7303030 8.7720222 7.5418625 12.496464 6.948488 9.941351 15.884777 9.632440 11.102506 13.317836 10.998623 9.528559 11.144540 13.825597 7.084264 10.001294 11.764966 NA 7.817770 11.908794 10.664419 6.558542 10.205048 8.824681 7.570924 10.306931 4.473150 6.437526 10.106765 5.857065 -0.884434 7.283015 8.347395 12.901356 10.591078 7.548139 6.208355 10.530547 4.773806 10.180003 10.717600 11.329005 8.615443 11.062869 9.368263 4.607449 7.900020 8.769920 3.816036 12.068521 8.037438 10.300163 10.701499 7.641118 13.137135 9.684029 9.988272 12.386623 10.091445 9.987503 3.159984 TCGA-D8-A1JB 54 0 NA 569 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 109.61.0 NA NA 2 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 8.343418e-08 11.2687000 6.9588009 6.6842619 11.0651348 0.4300711 10.6925077 0.4300711 9.9023736 11.6817009 10.0708687 9.8506833 7.8921827 9.7208081 10.2692251 6.8949075 9.5721283 10.0965412 10.3034654 8.2502003 3.4300176 10.5139438 9.6321451 13.7521842 10.9970267 9.6427203 10.8440017 8.6198458 10.6136567 0.4300711 0.8450283 9.3498779 13.0718473 12.9720052 7.7934258 13.3388517 12.3683757 8.7489405 6.2026117 1.8450685 6.7277013 8.9178613 9.1293047 7.9192000 12.7543894 2.5454989 10.3890573 13.2924004 7.0099652 9.1993082 10.5437634 6.8894529 8.3488844 -0.1548914 14.7715081 9.6966986 3.1669885 8.1804493 -0.1548914 5.0545142 10.7196559 10.4807769 9.8014350 10.8562861 10.2379128 10.0361180 3.4889134 11.4227237 9.9979774 4.5174836 8.5068368 6.3764397 10.6099304 14.0548167 8.2468555 11.0965412 11.1835166 8.5262973 1.6524177 5.2373763 8.7728368 9.4643618 11.7633630 NA 3.4300176 7.1669865 10.2822907 10.6419096 6.0049305 7.6588398 4.2373725 10.9503125 12.1077409 4.2713211 13.4249639 4.5999485 7.5797685 12.1169594 12.0765800 12.8797718 7.7368423 9.7383603 11.0575552 10.6805487 10.9145085 5.3207915 8.2287629 11.7726516 12.1783539 -1.1548914 10.1065661 9.2341523 3.3044964 4.2377167 9.6483828 10.4593086 10.2639655 9.8166023 14.9600821 10.7269375 10.2217268 7.9404557 4.4889134 14.8362263 9.4253173 13.4178774 12.3821558 10.1882445 9.5940902 8.4468294 9.8681963 0.1136000 0.1136000 0.4643600 0.0902850 0.0801680 -0.0034627 -0.2173800 0.3145000 -0.1225200 0.0898510 0.0898510 0.0898510 0.1271200 -0.2139200 -0.0637030 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0518140 0.0868110 0.4071100 0.2725300 0.2725300 0.2725300 -0.0015243 -0.0015243 -0.0015243 0.2035000 -0.1145000 0.1136000 -0.3092100 -0.2155200 -0.0034627 -0.0733040 -0.1236900 -0.1236900 0.1736500 -0.1225200 -0.1225200 0.0847870 0.0801680 -0.2212100 0.0721090 -0.2051000 0.0637950 0.0637950 -0.2139200 -0.2139200 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0054139 0.0518140 -0.2115600 -0.0694660 0.0566550 -0.2384900 0.2725300 -0.0678000 -0.0015243 -0.0015243 0.2035000 -0.2099500 -0.2325100 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 10.2728954 11.7334215 5.3528538 9.7861064 6.1379318 11.1319053 4.5454989 1.6524177 8.2859279 9.4347100 NA 7.6132428 2.5454989 10.4058692 9.2597440 1.4300176 9.6206691 9.9010191 11.0068205 10.3592797 9.5379271 8.0496297 10.2702746 4.0929854 8.6459588 10.0361180 4.3686217 NA 10.5262971 5.2200977 12.9327702 12.2202340 8.2900737 10.8348081 9.6612424 9.3577992 7.0882328 0.4300711 -1.1548914 0.8450283 7.8894529 8.0471828 10.4821365 5.5315593 9.0812405 6.6588398 10.2890384 5.8894541 10.1793320 NA 11.0520731 3.0929854 6.7875735 9.5693168 6.0732033 7.3842174 9.5907332 8.7963434 8.2544495 NA 13.4982397 1.8450685 10.7999821 NA 7.7639221 6.1849091 8.6572363 9.3126643 11.962863 5.352854 9.075079 13.338852 10.593671 10.866733 12.754389 12.670018 9.302060 10.716194 12.758322 11.540940 9.464362 8.059378 NA 8.061805 11.887573 10.8959278 6.7030398 9.0435039 8.7292292 8.3587866 10.3381236 8.0618048 8.8323229 10.9970267 6.4149152 6.3686200 6.4523895 7.3179525 11.0134175 11.1370928 8.0318666 7.9218743 10.9756293 8.9807679 9.8014350 10.4073012 11.5019305 9.9935354 10.5415917 9.0678538 -0.1548914 9.1743842 7.4560833 9.1106738 10.6419096 5.9846099 10.8597767 10.9503125 7.3288742 14.0374672 10.2135653 10.3548338 13.0911313 9.9865274 9.7654116 3.4300176 TCGA-D8-A1JC 59 0 NA 480 breast stage iiia t2 n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.529627e-06 4.171709e-07 11.602802726 4.126493860 7.842697303 11.072686659 0.582170591 10.973592622 1.582170591 10.581700259 11.788370380 7.567063191 10.446614067 7.385224800 9.551316634 10.040918314 6.574635909 9.371160237 9.514876952 9.676247659 7.087319625 2.697640395 9.464303545 9.694609488 14.286397868 11.106385161 8.938988793 10.688078487 6.191965273 10.601065608 -0.002743728 2.855192408 8.496056830 12.001076724 12.237924288 9.155185823 12.563499416 12.583050274 8.554671344 7.022346727 4.472942604 7.923503391 8.992267943 7.580290229 8.118740742 12.204984454 4.019577385 9.353109103 13.993349920 5.389525513 8.873593911 11.358877147 8.155817019 5.711453608 1.804549245 13.800185977 10.991914495 3.206658851 8.560403916 -2.002888279 4.472942604 10.312073935 10.768077773 9.763736390 11.840637856 10.169322375 10.070344914 4.167133091 12.141068965 10.087650724 4.927943848 7.954309744 6.848957131 9.986601926 14.705294465 8.756388193 11.362573062 12.108832238 8.375502149 0.997183998 3.456635328 9.224823390 9.604075402 11.236358436 0.319155458 5.725127635 7.518808136 10.083675441 9.582639546 5.146956567 6.798107558 4.927943848 9.974487440 11.653855805 5.063295842 12.983849511 5.879850323 7.859844723 11.859941681 13.206165755 12.807728912 8.776926787 10.107690746 10.798511655 10.243918351 11.265310830 5.718306822 8.584047377 11.954218816 10.162114471 -2.002888279 10.725340608 9.777337024 3.520774236 1.703189315 10.157709206 9.744561247 9.526638122 10.205441878 15.340618776 10.573691869 11.003182814 7.506982698 3.904098685 15.158132632 6.259302621 12.617083553 10.885760500 10.483288271 9.038182094 8.002831889 10.837908719 -0.654910 0.758530 0.762930 0.071391 0.054732 0.096525 0.000000 -0.514550 0.024408 3.656900 0.494070 1.444500 0.080024 0.074455 0.066229 3.656900 3.656900 0.111690 0.111690 -0.668460 -0.153490 0.049682 0.141620 0.141620 0.141620 -0.652580 -0.189490 0.077292 2.792900 -0.656680 -0.654910 -0.092681 -0.673430 0.096525 0.055715 0.000000 0.000000 -0.514550 0.024408 -0.745340 0.086348 0.029466 -0.705170 -0.666700 -0.666700 -0.176890 -0.160770 -1.005300 -0.661520 -0.663370 -0.664480 0.111690 0.114620 0.114620 -0.668460 -0.153490 0.050819 -0.621880 -0.654450 0.141620 -0.648090 -0.652580 -0.189490 -0.052396 -0.689240 0.103660 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 -0.196 1.445 -0.667 -0.177 0.000 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 -0.196 1.445 -0.667 -0.177 0.000 8.810186972 13.187765242 7.271003533 10.063296651 1.904079412 9.851296645 -0.417925779 0.319155458 8.451506628 8.089964701 -1.002888279 7.570361981 2.389511746 10.746238856 8.775284671 4.892026663 10.996326670 9.588729812 9.465831453 9.970546112 9.768639231 8.113551530 10.277108244 3.245130531 6.047056276 10.070344914 2.582170591 -1.002888279 10.574636287 1.904079412 11.171821112 11.433007935 7.680201970 10.386838854 10.640161681 9.108343063 3.830093032 1.582170591 -0.002743728 1.319155458 7.038866327 8.174627129 10.370616469 3.041593449 9.011730154 7.716596568 10.059928316 6.277979170 9.965874306 -1.002888279 9.877173530 3.927943848 4.337054524 9.860181913 5.053250385 4.226022926 9.520279229 8.287226167 7.235612191 1.804549245 12.886663920 0.997183998 10.279716777 -0.417925779 6.551795916 3.997211101 8.451506628 8.701110970 14.884341 6.389526 8.704567 12.563499 9.175872 10.854994 12.204984 11.713384 11.223233 11.207879 12.865451 10.031663 9.604075 7.757096 0.997184 7.316880 12.725978 10.9584763 6.7686965 8.3225127 9.6114572 9.8029514 10.2140867 6.9010889 7.9025946 11.1063852 6.5821706 0.5821706 3.9040987 9.1838170 11.2168298 10.3058309 10.2742042 7.7131693 12.2947686 5.9687520 9.7637364 10.4913130 11.3001320 10.3703446 10.7293749 9.0859958 7.1444125 8.6231993 8.7109720 5.5129063 9.5826395 8.3314809 10.5278577 9.9744874 7.5952597 12.1726791 9.5694339 9.7682843 13.2577228 9.6806408 10.0063363 0.5821706 TCGA-D8-A1JD 41 0 NA 552 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 3 1 1 3 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.046727e-06 3.469029e-07 11.4080269 1.8629472 7.5410060 11.3567892 -2.0439433 10.3424445 NA 10.3699355 11.5452261 7.5762629 9.5605963 7.1284708 8.4942320 9.1272200 6.8109109 8.5344157 9.5503678 9.8849315 7.4378428 4.1848595 9.8584182 9.8700544 13.1593529 10.8762099 8.6907527 10.7716266 5.2779699 10.9044030 NA 0.2779847 8.7778172 11.6489855 12.8467349 8.6530106 12.7695738 12.8617592 8.8704282 6.6355237 4.0645639 6.0167392 8.5605965 9.8459273 8.2529591 12.2338390 4.3483599 9.6482227 13.2012987 7.3354216 8.8599248 11.4829091 5.9839490 6.5029368 -0.4589808 13.7521575 12.0200448 1.6564964 7.9742431 -1.0439433 4.1057870 9.9203840 10.7847747 9.4363284 11.8745337 9.7806042 9.6621074 0.9560567 11.2113668 9.9127823 4.9218267 7.7762218 -1.0439433 10.6871499 15.0106051 7.9113297 11.8596426 11.6082159 8.6178212 1.6564964 NA 8.8970906 9.8182930 10.7903166 NA 6.3948348 7.0827473 10.7100955 11.3428487 7.2711931 6.9867101 5.9218267 9.5985461 11.4666837 0.5410192 13.3698033 4.4478965 6.6390382 11.7072734 13.6122445 12.9263288 8.7666147 11.1129162 11.0143731 10.5219354 11.2999228 4.7504564 8.5144640 12.7214846 11.0172456 NA 10.5725919 9.6890585 0.2779847 2.4376006 9.5363016 9.9763287 9.8070113 9.6754319 14.4186892 9.8878886 10.9863654 7.5908542 3.0435020 15.5637708 7.2298388 12.8892266 12.1843357 9.3627795 8.7762221 7.8217765 10.1088540 -0.0031859 0.3611800 0.8564000 -0.3485100 0.5836300 0.4828500 -0.0084385 0.0076392 -0.3516800 -0.6964900 -0.6964900 1.9242000 0.4835400 0.3381300 0.5542500 0.7400500 0.0200630 0.1420600 0.1420600 -0.4152100 0.4945900 -0.3106100 0.0978330 0.0978330 0.0978330 -0.0060607 -0.0060607 -0.0201380 0.6671500 -0.3221700 -0.0031859 0.0000000 -0.3328300 0.4828500 0.4483300 -0.0084385 -0.0084385 0.0076392 -0.3516800 -0.7126500 -0.4864900 -0.5847100 -0.6964900 0.2299300 0.2474700 0.2474700 0.2474700 0.3381300 0.3356400 0.5542500 -0.6073800 0.1420600 0.1420600 -0.6996500 -1.0142000 0.4945900 -0.0641060 -0.6790700 -0.6587300 0.0978330 -0.0340860 -0.0060607 -0.0201380 0.6671500 -0.6668900 -0.3114300 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 -0.311 -0.290 0.000 -0.333 -0.333 0.483 0.115 0.000 0.000 0.000 -0.352 0.109 0.109 -0.696 1.924 0.247 0.247 0.149 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 -0.311 -0.290 0.000 -0.333 -0.333 0.483 0.115 0.000 0.000 0.000 -0.352 0.109 0.109 -0.696 1.924 0.247 0.247 0.149 9.3854498 13.6906998 8.6035017 10.0576906 3.0004327 10.1474109 0.5410192 -2.0439433 8.3025567 8.7905140 -2.0439433 7.9325644 -1.0439433 10.7987863 9.0018028 2.1259817 6.6599474 9.9704124 11.1381271 10.7938682 10.3126492 7.6720052 10.1287831 3.6284703 9.0833926 9.6621074 8.5058278 NA 10.6353033 1.5410192 12.2349281 11.8523755 8.2621047 9.5935738 9.3086385 9.0955946 6.2087084 0.2779847 -1.0439433 6.4031262 8.4717431 8.5296902 10.2101860 2.7109221 8.4911436 7.4990749 9.8144128 7.0955943 9.3250952 NA 9.5962880 4.0645639 4.7633956 9.3284512 5.6034305 5.1557169 8.8926809 8.5010075 8.4287341 -2.0439433 13.3034569 -2.0439433 10.5228107 NA 6.7109304 3.3135941 7.3223653 8.4922902 13.13176809 6.18004440 9.20456381 12.76957382 9.81518970 10.92812541 12.23383903 11.84059525 8.97413205 11.13564125 12.83332726 10.91477707 9.81829297 8.95110371 -0.04394335 7.85388839 10.69919451 11.565799 7.970063 8.620490 9.155716 9.115284 10.667523 7.529691 4.241444 10.876210 5.814025 4.184859 4.415475 7.757105 11.081134 9.897824 9.447831 9.581295 12.220706 6.356922 9.436328 10.653662 10.856721 9.284718 10.605075 9.221072 NA 8.900675 7.782591 5.730830 11.342849 9.158167 10.515946 9.598546 8.201905 13.561899 9.801533 9.876024 12.652196 10.629131 9.604850 2.277985 TCGA-D8-A1JE 62 0 NA 575 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 4 3 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 5.562279e-08 11.0920160 1.1860568 7.6060254 10.4082561 -0.2290441 10.5643598 NA 10.8921292 11.3220948 5.8299206 10.3367642 7.7329597 8.6227766 8.6888968 7.2893531 9.5611044 9.4875611 10.1362563 7.6839168 2.8865111 9.2728647 9.6253764 13.7652630 11.0118188 9.6958399 10.7892276 5.2084314 10.7533080 0.1861202 2.4340010 8.7653809 11.6701325 12.2376138 8.7663235 11.6451123 13.2088228 8.8380135 6.6859107 2.3560029 6.7213398 7.9674246 9.8053679 7.7057015 13.4859884 -0.2290441 11.5508835 14.1046487 5.4148831 9.4609207 9.9426212 6.4668359 7.8062847 -0.2290441 13.8583135 8.5000818 0.5080229 6.6039171 NA 4.2945913 10.2541714 11.8246140 10.6393356 11.5658494 10.1944935 10.0641158 -0.2290441 11.3179219 9.1818321 5.3153489 9.2972006 -0.8140066 10.8797697 14.5105971 6.4577141 11.3921635 12.1663830 8.5079932 NA 4.9674269 7.8117735 9.2467608 12.7976661 -0.2290441 7.3408827 6.9608522 11.4662557 11.7998544 10.1860650 6.4760835 4.7252231 10.9962349 12.0281206 1.1860568 13.9636798 6.9509361 8.9173840 12.4168359 13.2804726 13.1102743 8.3484564 9.5975759 10.9459531 10.8664552 10.9863582 5.5869448 7.9755987 12.1874731 10.7710275 -1.8140066 10.0629656 9.2181106 -0.2290441 2.1569143 10.2494600 10.4241711 10.0054457 9.7392142 14.9376874 10.1340670 10.1142132 9.1079060 1.6455172 16.2282907 8.9442880 13.3199296 11.4281970 10.4061409 8.9131345 8.9682440 9.9894050 -0.4163000 0.3961200 0.3961200 0.0145720 0.0189430 -0.3901800 0.4185600 -0.4076000 -0.3864900 0.0095883 0.0095883 0.0095883 -0.4203600 0.1227000 -0.4158800 -0.4158800 -0.4158800 -0.4136300 0.3678900 -0.3904000 0.0061830 -0.4186000 -0.4455500 0.0955080 0.0955080 -0.0665200 -0.0665200 -0.0665200 0.3657500 -0.4163000 -0.4163000 0.0000000 0.0145720 -0.4552200 -0.4201400 0.4299100 0.4299100 -0.4076000 -0.4076000 -0.4219300 -0.4069400 -0.4069400 0.0095883 1.1813000 -0.3970800 0.3771000 0.3771000 0.1227000 0.1227000 -0.4158800 -0.4068300 -0.4136300 0.3678900 0.3373900 -0.3904000 0.0061830 -0.4186000 -0.4276100 -0.4455500 0.0955080 -0.4038500 -0.0665200 -0.0665200 0.3657500 0.0023581 0.3409600 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 8.3832818 13.5755282 7.8514011 9.3185647 0.5080229 10.5773085 -1.8140066 NA 7.2655494 8.9926146 NA 8.2058084 2.3560029 10.2695442 8.9550762 2.4340010 7.9122828 9.9380274 10.7859778 9.0471517 9.2084326 8.2748533 10.4909866 3.3153489 9.5981054 10.0641158 -1.8140066 NA 9.4887038 2.1860568 12.1232548 11.6860353 8.2263549 10.4133800 9.9050259 9.0564296 4.5259123 3.4339876 0.7710404 7.6536706 7.1079054 5.9139856 9.0839103 1.7710404 6.8585256 5.0062442 9.8424897 6.8549494 9.6248569 NA 12.3710177 2.6454942 4.0687052 9.5003707 5.1088590 1.7710404 10.2791523 8.4598607 2.8299307 NA 13.5871444 0.9934208 9.7368117 NA 7.0502514 3.9934208 8.5826696 9.4106697 12.1628680 5.7252231 8.1860647 11.6451123 9.9990445 10.9871670 13.4859884 12.0236929 9.1315087 10.6495893 13.0710939 8.5314704 9.2467608 9.3011086 -0.2290441 7.9122828 11.7347664 10.9078050 7.7896914 8.7943197 8.7775874 9.5848086 10.3619762 6.8690595 7.5954559 11.0118188 7.2249837 -0.2290441 7.4668359 7.1296643 11.0729046 10.1881767 8.2331887 6.4481593 14.6176115 4.9542475 10.6393356 11.1002632 10.6883995 8.7597121 11.2292632 9.2635483 NA 8.4027503 6.8543822 3.4714736 11.7998544 10.3030586 10.5375370 10.9962349 6.7096270 13.1494126 10.3204912 10.4607343 13.3230160 9.4070478 9.4726226 3.3559888 TCGA-D8-A1JF 79 0 NA 366 breast stage iiia t1c n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 8 white not hispanic or latino 109.61.0 NA NA 4 3 NA NA 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 7.509076e-07 1.946798e-07 13.1633349 5.6564506 6.1560224 11.1158833 0.2135028 10.8401298 0.7985068 11.0982511 11.0599780 6.0652578 9.3427912 8.8022229 8.9026326 10.4323741 4.3427894 9.5655517 8.3796712 10.3405352 8.9405779 3.4229595 9.2653968 9.5246888 14.1929111 9.2135082 9.8797323 10.8467305 5.8859330 11.0568385 -0.2015762 4.1204017 10.3746400 11.0258861 12.3118693 7.5511299 12.7772407 12.2344881 9.6334684 5.9482177 4.0208666 5.2903249 8.5195698 5.9750592 7.3959025 12.4886142 NA 11.0778878 9.3909277 -0.2015762 9.3996225 12.1319056 8.4779509 8.0621309 3.8573640 12.2259992 10.4939890 1.2135028 7.7468381 NA 6.1263968 11.1798334 10.3730643 10.7531517 10.3568914 10.7923525 9.4272200 -0.7863728 12.3261106 9.7257548 3.9683949 7.4638063 -1.7863728 8.6882283 13.6530145 7.8841467 12.0022265 11.8151629 8.7632927 -0.7863728 -0.7863728 7.6036768 9.6470936 12.8070160 -0.7863728 9.0176391 6.6186498 8.3771580 10.4732515 5.9208673 7.7232835 4.9683949 11.4782440 11.4441291 -1.7863728 13.7244577 4.0463950 7.2660763 11.7462294 13.2738664 12.9744360 6.4708964 9.9473709 11.2839646 10.3545232 10.7690560 5.1907887 8.0224721 11.6476151 8.5012206 -0.2015762 10.2503687 10.1713357 -1.7863728 1.9403547 9.7752735 10.9681870 10.9324691 10.1222760 15.0593412 10.1986385 11.3361744 6.8788443 4.0961522 14.8465034 9.6902544 12.0856059 12.3207253 9.9833461 8.4802946 9.0953870 9.5920144 -0.3735300 0.3727200 1.0602000 0.3604200 -0.0200790 -0.3957000 0.5362000 0.5969900 -0.0215880 1.6852000 1.6852000 1.7180000 0.3471300 0.2298400 -0.0565190 0.3218000 0.3218000 -0.0043720 -0.0123790 0.5887300 0.3514400 -0.4157000 0.1501600 0.1501600 0.1501600 0.3155300 0.3155300 0.3374300 0.7230900 -0.3795000 -0.3735300 0.0039449 -0.0165080 -0.4325200 -0.3996400 -0.4021400 -0.3970400 0.5864000 -0.0185690 -0.0633770 0.6802000 0.6561600 1.6852000 -0.4169700 -0.4139400 -0.0306180 -0.3991400 -0.4110800 -0.4110800 -0.0565190 0.3218000 -0.0043720 -0.0072747 -0.0413730 0.5960900 0.3514400 -0.4050200 0.3169800 0.1501600 0.1501600 0.1639100 -0.7576700 0.3563300 0.7115800 -0.3672100 -0.0311640 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.051 -0.397 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.051 -0.397 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 8.6861990 12.3874976 8.8226868 8.5477814 2.7370594 9.9277537 0.5354558 NA 8.3809264 6.9448268 NA 7.9553628 0.7985068 10.4761903 8.8410422 0.2135028 8.7843126 9.7360897 7.0992047 10.3664268 9.5437752 8.1604145 9.4051842 2.2135028 8.8180616 9.4272200 0.5354558 NA 9.7709719 0.7985068 12.4534050 12.1933799 7.7757505 11.2817826 6.9208673 9.7267423 6.5081291 1.0208400 0.7985068 NA 7.7565403 8.0208633 10.7980010 3.1677112 8.8450035 7.1993504 10.2120986 6.9717309 9.5600219 NA 10.9403649 3.4614369 4.0714881 10.2639079 4.4139664 7.8573646 8.1412861 8.3632552 8.3128562 6.1263968 13.0345846 1.0208400 10.5218472 NA 7.0240803 4.7370702 9.0456071 9.4602488 10.854808 6.903506 9.335689 12.777241 10.325296 11.592345 12.488614 9.908301 9.563342 10.932041 12.824821 9.142027 9.647094 10.111732 3.383428 8.390928 12.218694 10.3174516 6.8465033 8.4779509 8.5950512 8.7232831 9.1503375 5.7604019 5.5798318 9.2135082 6.1618756 2.7984653 5.4326755 8.2479493 11.1030122 10.2071542 8.4732516 6.7173337 10.1346052 8.5578041 10.7531517 10.1563892 11.8665771 8.7843126 10.2417596 9.4878862 -0.7863728 9.9992100 8.6998705 8.5776430 10.4732515 8.4720742 9.6244895 11.4782440 6.9243149 13.0248272 9.9919961 10.8169027 12.8866516 8.9087364 9.5115708 2.9139521 TCGA-D8-A1JG 62 0 NA 366 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 109.61.0 NA NA 4 3 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.671152e-06 8.325669e-07 11.7686141 3.8043221 7.3870609 10.2093106 0.8567865 10.5781374 NA 9.5150055 11.4547136 7.7271588 10.8624187 7.8759877 8.2601104 9.9116890 7.7324341 10.3150542 10.3121214 10.6703463 8.1382273 6.9801761 10.0690300 9.8377497 13.6983304 10.2086799 9.8874613 10.5011654 7.0662474 10.2845529 -0.9506480 4.4417557 9.9116890 11.7311169 11.8943411 6.8917898 14.2903982 12.9297880 9.0374138 5.7147758 3.0036382 4.4757010 9.1074310 8.0079921 6.6418957 11.5858079 -1.9506480 10.0238539 9.7107720 3.7773566 8.9846042 11.8166926 8.8209285 8.4058911 2.8043221 15.3264061 10.4487171 -0.3656855 9.0794165 1.0494217 7.0578683 10.6233230 10.0592678 8.6428304 9.6386222 10.3304999 9.3520781 1.5088850 12.1218231 9.7524777 6.0437929 7.5730010 11.5548786 8.2029911 14.3477703 8.9443782 10.8862786 11.4412198 8.9978064 2.4417490 1.8567865 7.7394370 9.0437926 11.1918654 NA 6.3115340 7.2017240 9.1638323 10.8120289 5.8176233 8.6769733 5.3162254 9.7794846 11.5685840 1.3713916 12.9808231 4.8696198 6.6268684 11.8206191 12.9702107 13.0667261 5.7773592 10.1425267 10.7576609 10.3684565 11.8206191 5.7841480 8.9875485 11.4520516 9.8130666 7.2949919 10.3206104 10.0349253 1.6344074 3.7227174 10.3003298 9.1349117 9.3475018 9.7328726 15.5222728 10.2764534 10.6040280 6.8823288 4.8567965 14.4369012 9.0267190 12.2590449 11.7192101 9.7013877 8.7705384 8.9381826 9.6244442 0.064696 0.064696 0.062408 -0.253060 -0.244690 0.412500 0.427090 -0.247360 0.826720 -0.270050 -0.270050 0.730620 -0.231990 -0.251290 0.048730 0.000000 0.000000 -0.226950 0.068564 -0.609670 -0.254510 -0.239810 -0.598830 0.734220 0.120980 0.087867 3.538600 -0.248210 0.439070 -0.024703 0.064696 0.106910 -0.234070 -0.334070 0.352560 -0.617930 -0.626130 -0.247360 3.656900 -0.268010 0.432650 -0.265250 -0.280690 -0.611500 -0.611500 0.159100 0.159100 -0.251290 -0.251240 0.048730 0.000000 -0.160100 0.068564 0.027258 -0.609670 -0.243350 -0.239810 -0.238350 -0.598830 -0.557940 -0.251120 0.087867 -0.248210 0.460120 0.736500 -0.255720 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 1.915 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 1.915 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 9.1787221 12.6233822 4.1369050 8.7333110 4.5711186 10.8779724 2.5730109 -0.9506480 9.7121075 8.7576610 NA 7.7432221 8.0759626 10.8978666 9.3359970 0.8567865 7.8823294 9.7628257 9.8925751 10.1560022 9.4769669 8.2029911 10.5477898 1.7498775 7.6437639 9.3520781 4.2588958 NA 10.2237407 3.4069856 11.6678247 11.7400920 8.0704194 9.5180632 10.6803888 8.8704159 7.3463551 1.6344074 -0.3656855 NA 8.4513855 9.0202641 9.7739530 1.6344074 9.8675101 7.3255636 9.5764275 7.9074201 9.4667643 -1.9506480 9.8515517 3.9563262 2.7498775 8.9081896 6.2727660 9.0501436 8.8743980 9.2564536 10.7976320 3.3713637 13.1209854 1.0494217 10.5639067 NA 9.8365255 5.0381245 8.6878750 7.5027101 9.3668518 9.8515517 9.8009832 14.2903982 9.3003297 11.2690615 11.5858079 9.7355020 8.2686075 10.7472755 12.9329894 8.0065415 9.0437926 7.8664228 0.3713916 7.9487959 11.4499184 11.723631 6.433143 9.167082 8.905865 8.673321 10.771897 7.567109 8.305648 10.208680 6.824227 2.749877 2.219370 8.912301 13.357743 11.316518 7.641373 9.313882 9.854780 9.841823 8.642830 10.149444 11.429088 10.050847 11.179849 9.775231 -0.950648 10.519829 7.402101 9.926340 10.812029 7.746407 11.581430 9.779485 8.161879 12.929258 10.270422 10.922306 13.032566 10.626632 10.312708 5.316225 TCGA-D8-A1JH 56 0 NA 426 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no NA white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 8.343418e-08 11.63643657 9.11673902 7.60348986 11.02301119 0.02800328 10.75075823 -0.97199672 10.55004181 11.99805662 7.88126021 10.00630363 7.59019330 9.72839044 9.23374405 7.53970321 9.07643751 10.58828354 10.14071604 8.26993408 4.87343919 10.49198584 9.78991750 14.18632373 11.03445214 9.64174019 10.95591380 6.17260952 10.63204059 0.02800328 1.48738344 9.31450847 12.17833271 12.67073577 7.73012364 12.85390326 13.05391212 9.89097542 7.94532268 5.23740310 7.16750245 8.72056611 10.21684866 8.48225013 12.57448350 2.48738344 11.00612491 13.49067665 4.99373323 9.55209075 10.96366832 8.15465510 4.07234594 NA 13.81750780 9.67900235 4.05031885 8.25436303 2.19786539 5.35886742 9.87187183 10.34394940 10.11707006 12.27706418 10.18876760 9.93183254 3.75587034 11.86676073 10.14494446 6.56710884 7.90446784 7.79778861 11.95951929 14.93475914 7.83728480 12.02256936 11.51000237 8.56807886 1.83531777 5.50368265 8.45001565 9.48840655 11.94074652 0.61287145 6.23740502 7.14429421 10.10075326 11.11955143 7.51579050 6.82885115 5.41165334 10.83570811 11.74552005 2.72839946 13.72423911 5.87970087 7.86084054 12.68090771 12.15465520 12.97668297 8.07915941 10.14201832 10.91992423 10.83036412 11.43415573 7.60146551 8.18908276 12.07890469 11.92636316 -1.97199672 10.51880165 9.23129871 -0.38703422 3.28005063 9.98251065 10.93164435 10.37224661 9.47193020 14.72403531 10.06824046 10.17005774 8.63064973 4.71444885 15.61724344 8.82804157 13.80281499 12.15344493 10.26635542 9.39645729 8.76011813 9.87509811 -0.00124730 -0.00124730 -0.00124730 -0.01761900 -0.00456950 0.11717000 0.16370000 -0.00470790 -0.00470790 0.19223000 0.19223000 0.19223000 -0.01891500 0.01405100 -0.01609800 -0.01609800 -0.01609800 0.00055459 0.00055459 -0.02342900 0.00000000 0.09463700 0.00249690 0.00249690 0.00249690 0.11814000 0.11814000 0.11814000 0.12049000 -0.00124730 -0.00124730 0.00208050 -0.01761900 0.12638000 0.16220000 0.16370000 0.15912000 -0.00470790 -0.00470790 -0.00470790 -0.00788630 -0.00788630 0.16397000 -0.00774820 -0.00774820 -0.00774820 -0.00774820 0.01405100 -0.02009400 -0.01609800 -0.01491600 0.00055459 -0.00124730 -0.00124730 -0.02342900 0.00000000 0.09463700 0.04670000 0.00249690 0.00249690 -0.11678000 0.11814000 0.11814000 0.12373000 0.10366000 -0.03245000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.159 0.159 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.159 0.159 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 9.85012322 13.69639256 7.94382992 10.31161789 2.34118877 10.52330613 2.93483727 NA 7.90906442 9.01592513 2.72839946 8.36222395 3.95868494 9.98323733 9.32199707 0.83527734 9.58732786 9.45526351 11.09437636 9.64679503 9.50744800 8.18529768 11.23007455 4.11541618 9.79240769 9.93183254 5.86084116 -0.97199672 10.41516035 4.00522930 12.48237856 11.87667145 8.81422034 10.47813093 8.35100546 9.07983941 4.91059357 1.72839946 0.83527734 2.78282789 8.58445672 8.93032576 9.57049898 6.05031885 8.22441754 5.44580283 10.21251620 6.19285696 9.30116349 NA 10.90312408 3.11541618 5.32256995 9.61743330 6.46678371 4.98214482 9.59543149 9.04197120 6.67180711 0.02800328 13.48311738 0.83527734 10.85886204 NA 9.09269346 6.16750245 8.06137389 8.88203986 13.330697 5.275879 8.727523 12.853903 10.483278 10.274098 12.574483 12.909208 9.319121 10.993555 12.847631 10.376955 9.488407 9.122028 -1.971997 7.563226 11.647941 11.191600 6.782838 9.243484 8.943083 8.423485 10.685926 7.541678 8.653659 11.034452 6.256769 6.192857 5.519803 7.329150 12.265235 10.398911 8.597806 8.139086 12.405636 6.860841 10.117070 10.214374 11.371692 10.133532 10.698386 9.562254 NA 9.670513 8.127614 6.372247 11.119551 8.769418 10.687412 10.835708 7.374641 13.800393 10.173564 10.167822 12.960950 10.533762 9.859258 2.197865 TCGA-D8-A1JI 54 0 NA 577 breast stage iia t1c n1a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.503025e-07 11.0158024 5.9568187 6.9020265 11.3826671 -0.3740750 10.2656952 2.0853227 9.9233918 11.0265149 11.7879789 9.8956135 7.9455743 9.0384721 7.8996977 7.7933204 9.1727968 10.1435716 9.1679668 5.6919919 -1.3740750 10.7252501 9.1737608 12.5683251 11.3040622 9.1267442 10.3088969 3.9113081 10.3220005 -1.3740750 4.4587954 6.5085459 11.2413020 13.0519049 4.7756511 12.3702106 12.3826671 7.9612928 7.1804910 4.2697588 7.7344265 8.1416019 8.6117441 6.5566394 13.1181936 5.8353557 8.6496568 14.0149958 5.6031812 9.8954615 10.5891596 7.3606118 9.3740951 NA 14.0137369 7.7983299 1.2108875 5.6702965 NA 4.0521637 9.9938630 10.1708667 11.3084580 9.0321072 9.4651060 9.6280140 3.4332533 11.1023954 10.1914804 7.3639945 8.3891146 -1.3740750 10.2579887 13.5051505 6.7038399 12.0711758 10.8711578 9.6152967 NA -1.3740750 7.0310433 8.9296830 11.5608831 NA 4.3263432 6.6865986 11.0074452 10.7542188 6.2406120 5.1494626 4.2108642 10.2836673 11.6259023 3.7551867 13.4409853 8.0289144 7.9612928 11.2747092 10.9726930 12.4841747 8.3228696 10.9762890 10.2751584 10.7849126 10.5245037 4.7958293 8.9170731 11.5512713 9.7305010 NA 10.3474287 8.8231191 2.0853227 3.5833506 10.0192927 9.5440201 9.1650610 10.6997091 14.8681088 10.2127421 9.7226175 8.9735237 0.2108875 15.8851766 4.9113033 11.6343309 9.9635241 10.4741339 9.0214364 8.2258152 10.5345914 -0.4471700 0.4405400 0.4693000 0.0175020 0.0175020 0.0370760 0.0366530 0.0985600 -0.7783800 0.8282300 0.8282300 0.0013868 0.0095883 -0.8986300 0.0244080 1.7550000 -0.8807800 0.0000000 0.0000000 -0.9428500 0.0168450 -0.0027707 -0.0583270 -0.0583270 -0.0583270 -0.1126000 -0.1126000 -0.1153400 0.6559000 -0.4471700 -0.4471700 -0.4470100 0.0175020 0.0370760 0.0370760 0.0366530 0.0366530 0.0985600 -0.7783800 -0.8010100 0.0259520 0.0204830 -0.9134900 0.0369350 -0.8895500 -0.8895500 -0.0661180 -0.8986300 -0.8986300 -0.0526830 -0.8989300 0.0000000 0.0000000 0.0000000 -0.8784500 0.0168450 -0.0027707 -0.9092700 -0.0583270 -0.0583270 -0.2385100 -0.1126000 -0.1153400 0.6651200 0.0114330 -0.0661590 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 7.3124029 10.5570091 3.7133659 10.0036551 2.2488384 10.2774025 0.2108875 NA 8.5566398 6.1727975 NA 5.3807883 -0.3740750 9.7259074 9.3732560 4.9113033 13.5880301 9.1929077 10.4432857 10.2346192 10.0896617 8.0771132 10.0558320 1.2108875 9.0884045 9.6280140 3.2697513 NA 9.6038976 3.2697513 11.9558387 12.1065663 7.2625271 10.0729855 7.6454927 9.2634328 5.8738304 0.2108875 0.2108875 8.4039796 9.5440201 8.5085455 10.3202601 2.3263360 9.0041103 6.2841143 10.4015126 3.3263360 9.9878461 -1.3740750 10.8377906 0.9478531 4.5085427 9.7180186 7.1685087 0.6259250 8.5742696 7.3088969 4.8738280 NA 13.3741475 NA 10.3656829 NA 7.3401474 5.3807883 8.6273106 8.6088957 15.006262 3.625902 9.501652 12.370211 9.276954 10.687273 13.118194 13.160874 8.324607 10.382459 12.775094 10.004739 8.929683 8.639923 NA 7.820659 10.533169 10.911593 6.883290 8.433257 9.454832 8.645493 9.939432 6.394087 8.097578 11.304062 6.520721 1.433280 2.433253 6.211390 8.041644 9.052167 10.090958 8.497808 12.702050 3.018225 11.308458 11.371156 10.809538 8.714691 10.716676 8.529784 NA 8.175186 5.835356 2.326336 10.754219 8.321131 10.691655 10.283667 6.765454 13.624581 10.808297 9.893859 13.174604 9.434867 9.532041 2.085323 TCGA-D8-A1JJ 54 0 NA 611 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 124.53.0 NA NA 4 3 NA NA 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.140267e-06 5.562279e-07 11.4853139 4.9624935 8.6868125 10.7448410 -1.7656213 10.4904851 NA 10.7052302 11.2736618 9.9427930 9.7761520 7.5245903 8.3153887 9.1164500 8.1945732 9.8851744 9.9586588 10.3922340 7.6919521 3.5565030 10.4123023 9.5036980 13.7955609 10.7708186 9.4507108 10.8923364 4.5383519 10.9380424 0.8195047 1.0419438 8.7453355 11.8314599 12.3958607 7.8101108 11.3183831 12.7178203 9.5519839 5.2679927 0.2346239 6.7383977 7.8820298 8.1217920 7.8511200 12.5682858 2.2345626 10.1884040 12.5312008 7.1770856 9.0555799 11.4414331 7.4561581 7.0322331 -0.7653761 14.0939358 11.9685399 1.4045217 7.3817765 -1.7656213 4.1414655 10.4160342 11.2463228 9.4651923 10.9620664 10.7524867 9.2604030 -1.7656213 11.4507109 9.9289293 5.7502715 8.2789656 10.1604966 10.2398450 15.2017751 8.5342601 10.9612153 10.8853987 9.7393903 2.2345626 4.8927844 8.7872405 9.6837200 13.4012836 -0.7653761 7.3586925 7.4243956 9.2232560 11.6719333 6.5921236 6.1534345 6.2118513 10.7011577 11.7230392 2.9894660 13.5079663 6.0547508 7.7872405 12.5096774 13.2880306 13.4720054 8.0027554 10.9144912 11.1874945 10.3872238 11.3816172 4.5921221 8.8214111 12.5846127 11.2329855 -0.1804953 10.5615625 9.0330430 -0.7653761 3.6618408 9.7077698 11.4784891 10.9332760 9.1571557 14.9526359 10.2426498 9.8288959 8.9565248 3.4440309 14.9762227 9.5354958 12.4839811 11.9812956 9.3220343 9.1482089 8.9777227 10.5146606 -0.248970 0.567390 0.574830 3.656900 0.190560 -0.480550 0.302820 -0.173790 0.416130 -0.867350 -0.867350 0.151990 0.052810 0.052099 -0.024765 -0.024765 -0.024765 0.037076 0.037076 0.155320 -0.236800 0.047457 -0.515380 -0.508150 0.638830 -0.163450 -0.517020 -0.201370 0.083198 -0.183200 -0.248970 0.000000 -0.473210 -0.311550 -0.530000 0.302820 0.302820 -0.165360 0.414510 0.453770 -0.524910 -0.292480 -0.867350 -0.517040 -0.517040 -0.517040 -0.405170 0.052099 0.070673 -0.051867 -0.025346 0.037076 0.037076 0.037076 0.027357 0.059223 0.023005 -0.184080 -0.515380 -0.508150 -0.155030 -0.163450 -0.201370 0.040892 0.068091 -0.496320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.459 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.459 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 -0.318 8.4561585 13.8354135 3.6939998 9.3773166 3.2345780 11.1565982 NA NA 8.1960212 7.9624918 -0.1804953 8.9315389 1.6939887 11.1595693 9.2520757 0.8195047 7.6418393 9.3548092 7.2429997 9.4138585 9.5795995 7.7021768 10.8718754 2.0419088 6.5199743 9.2604030 0.2346239 NA 11.0042026 1.5565030 12.9210172 12.4469157 7.1887678 10.2478941 9.4488904 9.0761358 5.1172130 1.0419438 -1.7656213 8.2104191 7.7364087 9.1103207 9.8779766 2.1414655 9.8441934 5.4729751 9.4488904 7.1354384 9.6728434 -0.7653761 11.2991457 2.8784311 3.5565030 9.4635883 6.3267477 2.3220435 9.3502654 8.2387916 8.4729759 1.4045217 13.9491925 -0.1804953 10.4004205 NA 8.1354379 3.5565030 8.6139497 8.6204336 12.916321 6.092552 8.171209 11.318383 10.524590 11.128062 12.568286 10.718891 9.160867 11.262477 13.159337 9.532634 9.683720 9.745830 1.819546 8.390654 11.508804 10.7970523 6.2513802 9.1638298 8.8446734 8.8167133 10.0503069 6.3586934 8.5417723 10.7708186 6.5832994 2.2345626 5.4729751 8.0358108 11.3045245 9.4789352 8.2485918 9.1967445 12.0375925 4.4633870 9.4651923 10.1902212 11.8031213 9.3963331 10.3103847 9.6970736 1.9350071 9.7043201 7.9375922 3.1414655 11.6719333 8.6868125 10.0968212 10.7011577 7.6816545 13.7401348 10.1545519 10.4302511 12.4083265 10.6233958 9.3026778 0.8195047 TCGA-D8-A1JK 90 0 NA 612 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 6 1 2 2 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 3.885312e-06 1.283541e-06 12.77164087 1.51540969 6.85528213 10.66644869 NA 9.74665338 NA 8.95699318 10.90452572 5.42232384 8.89913635 6.83736050 8.45599046 10.25802230 6.14963739 9.63437328 9.31633200 10.45990021 7.92764939 8.29021934 9.48025442 12.00410917 13.87641640 9.90774965 9.18785755 10.47688186 6.93047006 9.75144631 0.93047242 0.51540969 9.34198063 11.32010103 11.86581893 7.54517918 12.18653089 11.82035386 9.74344916 4.38990404 -1.06945188 5.75064938 8.17126088 6.63782902 7.92764939 11.90774961 -1.06945188 11.49199631 8.42832164 5.42232384 9.72605480 10.62308514 9.26026612 6.38990060 2.10040584 15.03136686 10.46865856 1.51540969 8.56346476 NA 5.64471578 9.84634898 10.28471909 9.32921331 8.61871989 9.58421053 10.80852060 1.25241566 10.28912092 9.26920594 5.80083520 8.20193276 4.10039743 8.19021285 15.44962982 6.09859010 10.83623273 9.63610200 11.08433831 1.93047242 -0.06960327 8.70195930 8.32707429 11.02454734 NA 7.75701791 7.97759362 9.63437328 10.05975274 6.67866211 7.09537698 5.73782464 10.05200322 11.42956811 NA 13.50677686 6.40620330 5.97486425 11.36900166 14.24186323 12.42545023 8.29021934 10.53594922 10.80813724 10.54441100 10.45941205 4.28801889 8.90344957 11.70587421 8.69368209 -0.06960327 10.96595610 8.98575201 1.93047242 2.10040584 9.73862937 9.04941077 9.65753926 9.35253454 16.25901655 9.98167858 9.28912092 6.17839795 2.73781653 13.44555348 9.55068946 13.33394778 11.32573601 10.13075523 9.30006697 7.84634914 9.54768927 -0.0256200 0.2012100 -0.0793430 -0.2981500 0.0615080 -0.2727200 0.6629000 -0.0408880 0.0992880 -0.0387140 0.4814800 0.2271500 0.3698600 -0.2987400 -0.2815600 0.0842090 0.0842090 0.0519560 0.0519560 -0.3219300 0.2585500 -0.0667880 -0.3067400 -0.3053400 0.1425100 -0.0321780 -0.2678600 0.0875340 2.2240000 -0.0073339 -0.0256200 0.0168450 -0.2981500 -0.3034500 -0.1653600 -0.8471500 -0.2860300 -0.0313590 0.2796300 0.0520990 0.4720400 1.4687000 -0.8855000 -0.1762600 -1.1110000 -0.2976800 0.1814700 -0.0374900 -0.3305200 -0.6497700 -0.2870300 0.0519560 0.0519560 -0.2933100 -0.1887300 0.2783700 -0.0488020 -0.0407520 -0.3290100 -0.3053400 0.0827650 -0.0321780 -0.3808900 -0.5706100 0.2032000 0.3396600 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.571 -0.398 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.000 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.571 -0.398 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.000 8.52479438 13.57133594 3.93047242 9.28361647 5.27031962 11.76632272 0.93047242 5.87298385 8.89191946 9.27476554 NA 8.32893562 8.09286124 11.37107935 8.85379703 0.93047242 4.88466629 8.19725602 8.24788243 10.63394072 8.86315701 7.00728522 11.84728219 2.51543493 8.01261895 10.80852060 0.51540969 -1.06945188 10.39756576 0.51540969 12.17111195 13.20623045 8.09537645 10.27254429 9.53872458 9.47156630 5.81311163 2.73781653 -0.06960327 NA 7.81311291 9.87225086 6.38990060 -1.06945188 9.62726338 8.09034112 10.12830062 6.80698647 9.65242321 6.46962879 11.86821129 4.45403109 3.17839595 9.79556112 6.69427987 7.34832184 9.31740990 8.58868128 8.59935462 6.94169675 13.82334448 1.51540969 11.29268749 NA 8.96526857 4.88466629 8.83886229 9.11782177 11.6676029 7.2388088 8.5958057 12.1865309 9.6786625 10.6421366 11.9077496 8.8388623 9.2158720 10.3398606 12.5261934 9.3324157 8.3270743 8.6378287 0.9304724 7.7538372 11.2504240 10.710599 7.465745 9.954910 8.166484 8.622213 10.000886 6.843360 5.305507 9.907750 4.574326 4.322786 6.178398 8.602753 12.507780 10.491758 8.622213 8.085288 8.215872 7.581521 9.329213 10.813495 10.816547 10.336143 9.664332 8.225090 1.515410 9.715930 7.613465 8.211241 10.059753 6.837360 10.455990 10.052003 7.239355 13.448262 10.760985 10.284168 12.500918 10.861207 9.319563 2.630918 TCGA-D8-A1JL 72 0 NA 611 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.39363e-06 7.978766e-07 12.56719884 3.72252067 6.67499444 11.38033676 -0.44732783 10.84280799 0.77500839 9.50630857 11.29406412 7.52414049 9.97501234 8.69725534 8.99069596 9.94240777 6.64359215 8.45848536 8.46847661 10.65894193 9.48727088 6.45948736 9.82949696 9.85675823 12.81928608 10.77840704 10.57010151 10.42809056 7.53749022 11.51380200 5.13756090 2.21555435 9.10910325 12.24688246 12.77835687 8.80683829 11.20020547 10.23149061 11.18180194 7.15745911 1.55257381 9.02494959 8.86925576 8.99554048 7.65763286 6.51066607 2.42706976 11.04227784 11.57450247 9.75226941 9.57727511 10.75104221 9.58372403 5.86850158 -1.03238869 15.36933107 11.99013769 2.13756910 8.28617746 -0.03238869 5.16730574 9.72001522 10.33641384 9.98792011 9.79973347 10.77156391 9.41833038 3.21556989 11.32628583 10.29574850 5.08657574 8.21674828 3.49119893 6.97886144 14.53676337 8.65230435 11.70657130 10.80289557 9.94741705 0.77500839 NA 9.67714932 10.18982579 11.77850745 NA 5.25303623 7.13254189 10.60312604 10.07354312 6.63652022 8.09304829 5.71582749 9.81077051 11.40265370 2.55259840 13.55124632 4.01203226 6.97606342 11.15761359 12.71975390 12.75329143 8.24608405 11.37848345 10.49119662 10.17706966 11.26569720 4.93341684 7.35349709 12.12955379 8.66373278 -2.03209363 10.77740278 10.09884850 2.42706976 2.82958575 9.35887819 11.28716561 11.76011992 8.83182088 14.66467005 11.05741609 10.62361249 4.80052721 -1.03238869 12.28998531 6.58234374 13.19457358 12.19607757 10.11674656 9.58418346 8.80368491 10.17842770 0.2645100 1.1024000 0.0840650 0.3039300 0.7120800 -0.0728080 0.6007000 1.7306000 0.4646400 0.6721500 0.6721500 0.6721500 1.7118000 0.0230050 -0.0180780 -0.0180780 -0.0180780 0.6916700 -0.5000600 1.6184000 0.6736300 0.0478360 -0.0161470 -0.0161470 -0.0161470 -0.3635200 0.1364300 0.1364300 -0.1968700 0.2645100 0.2535500 -0.5128000 -0.0331320 -0.0728080 -0.5308300 -0.4731100 -0.4979800 0.2942100 0.4646400 -0.1001300 1.4262000 0.1955800 -0.1542100 -0.0388500 -0.0388500 -0.0517210 -0.0953840 0.0230050 -0.5432000 -0.0180780 0.2383900 0.2180600 0.0026357 0.0026357 -0.5031800 -0.1458000 0.0478360 -0.0788100 -0.0161470 -0.0161470 -0.4203600 -0.2933100 0.1364300 -0.1968700 -0.0365380 -0.5322600 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 -0.215 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 -0.215 9.15064954 13.38492677 1.77500839 9.09304803 3.64006558 11.03119826 2.72253160 4.96763436 9.21674804 9.09433901 9.78821244 8.56820734 5.81938462 10.60380611 8.55071755 3.74899785 7.78461849 10.37038020 10.47691476 9.44286141 9.23840880 7.51838170 12.49511163 3.64006558 8.85713845 9.41833038 3.17708860 NA 10.12624436 2.49118610 12.14240431 12.90298387 8.36851388 10.53083089 12.13755962 9.68188019 3.85027937 2.96762975 -0.03238869 8.60968627 7.18680360 7.69895395 7.13002581 4.03372252 8.22690730 5.60425817 10.41109623 6.00105684 10.08787252 4.44336795 11.45195406 4.64005980 4.23442468 10.14439058 6.88193008 4.88649650 9.43473059 9.08462824 6.41471737 6.73912441 12.30887545 2.05509151 10.97360998 2.61147930 10.14878682 5.49901670 8.54033498 8.62763055 12.446143 8.770151 8.179523 11.200205 11.044784 10.814496 6.510666 8.696406 9.532737 12.108065 13.674023 10.849513 10.189826 7.850277 4.427063 7.805263 10.760628 11.122611 5.640060 8.813125 9.449434 6.229730 9.481343 8.222663 5.427066 10.778407 8.887988 3.874522 6.102062 9.042766 12.808658 10.449686 7.978862 8.281651 10.329852 7.598812 9.987920 10.259381 11.779611 10.499016 10.990869 9.544591 1.668074 10.031104 7.491197 7.314148 10.073543 8.018843 10.706246 9.810771 8.273696 13.606608 11.279950 10.952231 13.066818 10.164851 9.890962 3.668074 TCGA-D8-A1JM 59 0 NA 590 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 109.61.0 NA NA 4 1 NA NA 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.674735e-07 3.615481e-07 13.0388020 NA 5.2030132 11.9502007 NA 8.9948289 0.2960756 9.0214903 10.7406214 9.2120034 10.3819284 7.5006953 9.1726410 9.9769231 7.6112735 9.7743881 9.6365306 10.4859486 10.4766549 3.5815320 8.7959702 9.6157962 13.4459506 12.7102147 10.5357226 10.7509375 5.5815260 11.1357216 7.4610308 NA 6.4458707 13.1173500 13.1572110 7.3514066 12.1970852 12.8851900 11.1240622 5.8118229 2.2030132 9.3974432 8.9516548 11.0208511 8.6191789 7.0476682 -0.1188836 11.8211554 11.4751001 9.8937111 8.7359550 11.7159526 8.5976202 4.0774823 -0.7039244 14.0823766 8.7524787 0.6180507 8.3608668 NA 2.5440402 9.9209195 11.9857946 9.7769143 9.5849901 9.9747242 9.2525003 4.0510153 11.2454037 11.1806763 5.7223895 7.7555559 -1.7036894 8.4254073 13.5280203 7.9412419 11.7242225 10.1537164 8.5511526 1.7555713 -0.1188836 7.9982971 9.3709345 8.8284799 -1.7036894 4.5440526 7.8449461 10.3928392 9.8152690 13.6655511 5.8810870 7.7799399 7.9826246 12.0860652 1.6180507 12.6590953 2.8810772 6.7349155 8.7307524 13.5779817 12.8284191 5.6970037 10.5243415 11.3365851 11.0306538 10.7123938 4.1290109 8.4673011 12.0649287 8.1305953 -0.7039244 10.2338658 10.4685517 5.8659807 4.2046963 8.9834999 11.2835658 9.0086510 9.5219341 14.9677481 10.1568232 9.0518463 7.0609952 1.2961343 10.9607936 8.1618575 12.5818875 9.8881138 10.2131232 9.6542259 7.6970037 10.3620350 0.03665300 0.74746000 0.68421000 -0.80161000 0.79374000 -0.73222000 0.03552400 -0.82627000 0.03312700 -0.82220000 3.65690000 1.49700000 0.01936300 0.01754400 0.03397200 0.01108000 0.01108000 3.01380000 0.00000000 -0.80036000 -0.80119000 0.01000600 0.02328600 -0.76458000 -0.78908000 0.00069327 0.00069327 -0.80360000 0.01056400 -0.79235000 0.03411300 -0.02972100 -0.80161000 -0.81082000 -0.73714000 -0.81343000 -0.80956000 -0.82627000 0.03312700 0.03312700 -0.80551000 0.03143600 -0.81663000 -0.79110000 -0.79110000 -0.05145100 -0.05496000 0.01754400 0.04755200 1.19030000 -0.80352000 3.01380000 0.00000000 -0.82350000 -0.80036000 -0.80119000 -0.00747200 0.16880000 0.02328600 -0.76458000 0.04004400 -0.79168000 0.74081000 0.01810300 -0.76038000 0.06766100 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 7.5675873 10.4020326 6.0905401 8.0274433 1.6366826 9.8391559 -0.1188836 1.8810772 8.5792126 7.5321385 3.0510066 9.0929748 3.2503249 11.3104933 9.6431917 4.1541052 3.0510066 9.9865587 10.7952225 8.2283387 8.6596784 6.6270406 10.5637887 0.3492520 9.5505623 9.2525003 6.7959695 NA 8.7452726 3.0510066 12.8022457 12.6978703 5.5535110 10.2153598 8.2947145 10.4778976 6.0034831 0.8811164 -0.7039244 -1.7036894 8.4228284 9.2510473 8.3184917 7.6798284 10.5283682 5.3729382 10.7695762 5.4957975 10.8612262 2.2030132 9.7581151 3.7555606 11.1823922 10.4107872 6.0728197 3.1540971 9.6618997 5.9034553 5.1034809 3.1034809 14.5934703 -0.1188836 11.1509925 NA 9.2961240 5.3295470 7.3622130 6.5815260 8.661353 9.939078 7.631515 12.197085 9.427338 11.836131 7.047668 11.361540 9.275549 12.844043 12.943695 12.092874 9.370935 8.035905 2.383580 6.865979 10.364567 11.924570 5.982624 8.964122 9.273404 9.088914 10.602556 5.730751 9.264791 12.710215 9.362886 9.206017 7.688441 10.681693 11.814900 11.480999 7.966285 8.287646 9.532736 4.819684 9.776914 10.011228 11.849153 10.415714 11.196614 8.536915 7.375609 8.698923 11.764912 4.505580 9.815269 7.116303 10.950313 7.982625 7.979399 14.719109 10.514687 10.164947 12.909683 10.342907 9.371603 1.618051 TCGA-D8-A1JN 80 0 NA 620 breast stage iiic t3 n3a mx 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 11 white not hispanic or latino 109.61.0 NA NA 2 3 NA NA 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.850622e-06 1.665134e-06 11.52214586 4.44380554 7.24624370 11.05956538 -0.94841908 9.58091748 1.63645062 9.45556416 11.82874232 8.43519144 9.70522768 8.23883892 9.69984448 9.55332421 7.01148893 9.16783107 11.23388135 9.52924528 7.49027890 0.63645062 10.86966972 8.25850149 8.91722019 10.99436801 10.08697346 10.16522911 6.27065601 10.69353871 -0.94841908 1.63645062 6.95837755 11.04230008 13.07316104 4.54334121 12.70824702 13.70175341 6.56718643 7.18077047 4.26094399 3.29942051 8.24377998 10.63597979 3.29942051 13.96540485 2.63645062 10.23945759 14.04380578 7.46087769 9.14610582 11.62323963 7.44809152 7.35526740 NA 13.38285254 7.16001156 NA 9.22266379 NA 3.57504604 10.34265774 10.37228754 8.90010995 11.77258618 11.03269748 8.46511496 1.05151132 11.73601647 10.09109153 7.25115951 8.75539069 6.90323595 11.52924528 12.77258618 9.07160582 10.22578850 8.73798752 10.18847807 -0.94841908 6.35526828 6.94023019 8.55332402 12.84163182 2.37342549 7.21639375 6.93412959 8.44809193 10.94440922 1.85885630 4.98222241 2.63645062 10.59258364 12.01112674 3.22141312 13.59028218 4.37341853 5.80637562 11.10541284 11.76744898 12.44661942 6.62134275 10.34725594 9.85803665 10.12310357 10.98812489 4.44380554 8.80303099 12.21968898 10.77514794 0.05144171 9.63174547 9.07524140 0.05144171 4.01079774 9.08766067 9.94933240 10.34438369 9.04159098 15.42094802 9.35069503 9.75105945 9.59064580 1.85885630 13.47565328 10.17625457 13.13563099 10.90752336 10.23760124 9.47879975 8.45449918 10.72701628 0.0335490 0.9174300 0.9174300 -0.0119190 -0.0119190 -0.0083005 0.0379240 -0.0083005 -0.0083005 -0.0060904 -0.0060904 -0.0060904 0.0579390 0.0239170 0.0144700 0.0088545 0.0088545 0.0118180 0.0118180 -0.0197930 0.0224440 0.0603650 -0.8785900 -0.8785900 -0.8785900 0.1218200 0.1218200 0.1218200 0.0996630 0.0335490 0.0335490 0.0026357 -0.0119190 -0.0083005 -0.0469890 -0.0157410 -0.0189950 -0.0083005 -0.0083005 -0.0265650 0.0084743 0.0000000 -0.0060904 0.0202030 0.0202030 0.0202030 0.1475600 0.0239170 0.0239170 0.0144700 0.0296730 0.0118180 0.0118180 0.0118180 -0.0197930 0.0224440 0.0603650 -0.8954200 -0.8785900 -0.8785900 -0.9326000 0.1218200 0.1218200 0.0599370 0.0448570 -0.8720500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.04866669 11.38603960 2.75193497 8.79295391 NA 11.26610965 -0.94841908 NA 8.84102050 6.13894959 NA 8.43086523 NA 10.05148698 9.65974175 1.63645062 6.22141118 9.92030953 10.85036376 9.92646828 10.19304492 8.71682289 9.19359411 3.05149392 10.61372944 8.46511496 3.29942051 NA 8.67719567 0.63645062 13.18519113 12.45449900 6.75884547 9.94630481 8.66251173 9.01148893 3.90946591 -0.94841908 1.37339765 -0.94841908 7.85561789 9.14159934 12.02033374 4.60607499 8.97951666 7.52722050 9.52011105 3.22141312 8.66251173 NA 12.12613022 3.51092395 3.51092395 10.26409279 7.35055736 2.51091130 7.98812511 7.36889928 6.22141118 NA 14.24916443 0.05144171 9.70701775 NA 7.35982598 5.02876804 8.53731626 9.31475611 12.6750656 3.8063756 9.4944304 12.7082470 10.8320267 11.6258440 13.9654049 9.0129368 9.3445678 10.7287662 12.9017715 8.5652144 8.5533240 8.4944304 -0.9484191 6.8588414 10.2069377 11.036617 6.417809 9.263375 8.141599 6.231396 10.924616 5.680845 8.243780 10.994368 4.806376 8.128303 4.806376 5.219207 7.090406 10.783230 6.819671 8.895408 9.245012 4.934130 8.900110 11.065159 11.864867 8.531267 10.629388 8.679021 5.751927 10.075221 8.040200 4.443806 10.944409 2.751935 10.807209 10.592584 6.928004 14.336200 10.800937 11.311819 12.549713 10.707465 10.034481 NA TCGA-D8-A1JP 73 0 NA 639 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 109.61.0 NA NA 4 4 NA NA 1 2 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.636462e-06 6.938058e-07 11.0377566 6.1219396 8.8860099 11.3656711 0.5269702 10.1200722 NA 9.7968983 11.7035812 9.1863938 9.6977521 7.6969175 9.7209284 11.0996927 7.2181544 9.0255092 10.5668254 10.1774458 7.5382200 3.5858879 10.7509941 10.3001316 12.4443645 10.8177793 8.9406205 10.3289702 6.4177631 11.0981099 -1.0579923 4.1514854 8.4889243 10.8262005 13.3876268 8.6511138 12.2537782 11.3530112 10.1569561 5.6002400 2.2639658 7.9560503 8.1490444 9.6528364 8.1392464 12.9097065 3.4655958 10.3614635 13.4776091 4.5567421 8.9999811 11.3577717 6.2088157 4.6699508 -1.0579923 13.5515319 9.8443824 1.7494055 8.4596992 0.9420077 3.4655958 9.4763329 10.1624082 9.2594425 10.7725451 10.7697696 9.9005826 6.1899570 10.6805445 10.1107020 4.4014598 8.4157359 7.1169552 11.8944072 14.3150990 6.8681484 10.3808217 10.7550094 9.3545998 2.9420265 4.2995817 8.5326170 9.2503690 10.5617914 NA 6.6969175 7.0400617 10.9922187 10.9381503 5.9643986 6.6215098 5.6834972 10.3844551 12.1763983 0.5269702 13.3535409 4.1119577 7.2366505 11.6389975 13.6218399 12.5655685 8.1636170 10.5284006 11.3947860 10.9373236 10.4086162 3.7493841 8.0215147 12.2666324 11.4515575 5.8845442 10.1496544 9.3651459 1.7494055 3.2646865 9.2041248 10.4631395 10.1798375 9.1527014 15.1073099 10.5147301 10.6813886 9.0622677 7.1563491 16.7554479 8.4889243 12.5166234 11.9425582 9.9377971 9.7534046 8.0713127 9.8295399 -0.6192000 0.0269350 0.1237300 -0.0226060 0.4184800 1.0646000 0.0161460 0.0220240 1.4086000 -0.5967200 -0.5967200 1.5490000 0.0484040 0.0303100 0.0647970 0.0585090 0.0585090 0.0256710 1.1449000 0.0181030 -0.1649700 1.1736000 -0.5933100 0.0518140 0.0518140 0.0519560 0.0519560 0.1162400 0.2339500 -0.5732800 -0.6192000 -0.5943900 -0.6141200 0.0910100 0.7132100 -0.6374600 -0.0378980 -0.6207300 1.4086000 0.9227000 0.1898000 0.0038854 -0.6174800 0.0448570 0.0448570 0.0448570 0.0774300 0.0303100 -0.6075700 -0.6070000 -0.6197800 0.0256710 0.0109820 0.0109820 -0.6218800 -0.1649700 -0.6137300 -0.5834300 -0.5933100 0.0518140 -0.6131600 0.0519560 -0.5623600 0.5958400 -0.0402090 -0.4470600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.229 0.229 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.891 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.229 0.229 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.891 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 9.30287695 13.58588613 7.13678712 10.01416250 2.26396585 11.48070388 -0.05799229 NA 8.39941081 7.91069669 0.94200771 9.18709543 2.26396585 10.25944257 9.26508475 3.80000942 7.84591151 9.69273684 10.17864207 9.21582563 9.67429062 7.65627540 11.47292393 3.98642004 8.23665046 9.90058262 3.69691747 -1.05799229 9.94695261 3.74938409 13.32789233 11.77985496 8.30616470 10.51283437 8.76220894 9.54287207 5.74938409 3.18995104 NA 6.14170254 8.15634908 8.77491979 10.49037027 3.40146664 9.21735142 6.53448654 10.11007517 6.54935959 9.68518136 NA 11.31788390 3.89622340 4.55674208 9.75608357 6.05274844 4.18995894 9.88966686 8.17804432 5.29958170 NA 13.14484249 -0.05799229 10.27630322 NA 6.43388250 5.52699212 9.21699049 8.89913212 10.700778 7.642470 9.780446 12.253778 10.229742 10.006773 12.909707 13.195804 8.916444 10.182821 12.463385 11.745556 9.250369 7.975453 NA 7.836848 10.880139 11.118515 7.933552 8.380822 9.368295 9.241398 10.358949 7.281880 5.227433 10.817779 8.940620 3.401467 8.126905 7.729998 11.017843 10.212909 8.459424 8.257179 9.299582 6.457731 9.259442 10.190551 12.515914 10.101271 10.295177 8.156349 6.930715 9.093541 7.295177 5.131853 10.938150 8.582275 11.313137 10.384455 6.812394 13.768231 9.729933 10.042692 12.888205 10.922527 9.742121 2.263966 TCGA-D8-A1JS 77 0 NA 371 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA other specify yes 0 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.39057e-07 11.30761830 0.95501516 6.15142049 11.25346756 NA 9.11909208 -0.04498484 7.83562727 10.94110213 8.68521028 9.39242841 7.65314889 7.58438005 7.89166099 8.23269817 9.03094792 10.33584487 9.05831081 5.09798154 NA 10.85085082 9.14567083 12.29709777 11.42788316 9.17338457 9.92272963 1.53997766 10.78870382 -0.62994734 -1.62994734 4.69198633 10.30743445 11.98764283 2.37005266 13.23327894 13.07418037 8.34160421 6.66468194 2.89361461 3.12494016 7.33006266 8.98660946 3.65546632 13.62401884 2.27694325 11.97704407 13.94660398 5.47858358 10.70783854 10.71518854 5.89362189 6.07742033 -0.62994734 14.55927071 8.31550464 NA 9.53433907 NA 2.27694325 9.27544758 9.19422375 10.69985689 10.14813767 9.63274279 9.67669195 -1.62994734 10.42568200 9.62921544 7.22804135 8.02648527 4.32425617 10.65690711 13.58107431 8.80164176 11.01233800 9.78474591 6.22180943 0.69198075 4.59887730 5.26487792 6.90144256 10.45652855 NA 3.57951809 7.92848107 7.66238212 10.81015114 9.78580243 3.45752863 1.82948427 9.79265106 11.62921535 -0.62994734 13.51861661 7.08086655 7.59647305 11.01616924 11.59481598 12.41274597 8.46677556 11.13534671 10.34160410 10.40906873 10.23926878 3.86191567 9.25728129 11.04557662 8.67269936 -0.04498484 10.25766198 8.32425707 NA 1.69340890 9.21476643 10.90897701 9.14895901 8.18544388 15.36850778 10.30190608 8.20926424 7.57707529 1.82948427 17.59631048 10.72541168 11.75376489 10.62243039 9.62213457 9.16040897 7.57218406 10.82246655 0.0000000 0.8072700 0.8239200 -0.0053992 -0.0053992 -0.0048461 -0.0034627 -0.0073758 -0.0073758 0.0015255 0.0015255 0.0015255 0.0058309 0.0058309 0.0034687 0.0034687 0.0034687 0.0104240 -0.0050370 -0.0027707 0.0015255 0.0109820 0.0055529 0.0055529 0.0055529 0.0029133 0.0029133 0.0029133 0.0136320 0.0000000 0.0000000 0.0016642 -0.0053992 -0.0048461 -0.0048461 -0.0034627 -0.0034627 -0.0041546 -0.0073758 -0.0073758 -0.0008316 -0.0008316 0.0015255 0.0027745 0.0027745 0.0027745 0.0027745 0.0058309 0.0058309 0.0034687 0.0034687 -0.0050370 -0.0050370 -0.0050370 -0.0027707 0.0015255 0.0109820 -0.9131100 0.0055529 0.0055529 0.0109820 0.0029133 0.0029133 0.0136320 0.0052749 0.0174040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.3812886 10.6012817 2.9550152 8.2618443 0.3700527 10.4314318 NA NA 9.2777024 6.3868696 NA 4.3924273 NA 10.5067314 9.3096398 -0.6299473 2.4575155 8.7243099 11.9748454 13.6077187 9.9320740 6.5499694 10.5293012 1.3700527 9.3502002 9.6766919 4.2769507 -1.6299473 10.3394471 2.4575155 13.8302925 13.0970238 6.4199096 10.1039234 6.9053365 9.9540836 -0.6299473 2.6179802 -0.6299473 4.9246510 10.2147663 11.3197050 11.6027813 2.6919808 8.7169621 7.9208072 10.4890017 5.5795151 9.6577729 NA 12.4726105 0.3700527 3.4993484 9.8955521 7.3038985 NA 7.3416042 6.1249484 8.1497801 1.8294843 13.9580139 -0.6299473 10.1009552 -1.6299473 8.4628176 3.6554663 6.7879130 9.9838501 12.68195363 3.53999006 9.25423121 13.23327894 10.19660913 11.37392982 13.62401884 11.16488255 9.21931714 10.00985352 12.93635252 7.49676512 6.90144256 10.21044512 -0.04498484 8.17580451 10.38721701 10.24003998 5.70991093 9.08430615 8.61798825 6.81300385 9.35662077 5.42534181 7.23424647 11.42788316 5.26487792 6.46281797 5.48900015 5.34183279 7.22180943 8.93801667 6.51471879 9.45354001 9.19023952 1.82948427 10.69985689 10.49611966 10.53150740 7.59164800 10.10307585 8.32571066 NA 9.73843617 7.10070018 NA 10.81015114 2.17740758 10.65604072 9.79265106 6.45752370 13.92946756 11.27732687 10.96601733 12.68159605 10.15101045 9.08258764 -0.04498484 TCGA-D8-A1JT 70 0 NA 405 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA other specify yes 0 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 5.562279e-07 1.668684e-07 10.2875405 0.2524157 6.7200034 10.5748893 NA 11.1598518 1.4223407 10.1498651 11.3156243 10.9298972 10.3218475 7.9545703 8.1088234 8.8624997 10.4363432 9.2375281 8.9467557 8.2981574 6.3184868 2.7118253 10.1989385 8.0789460 13.4037315 11.6531438 9.8293544 10.4612417 3.3816848 10.6336703 -0.1626218 1.0597706 6.3765196 10.2268123 12.8252756 9.5150799 11.8414637 13.2768016 5.8890232 5.2065924 1.0597706 2.5003177 8.7118294 9.4354127 5.6532779 13.5621583 0.5743438 8.8588028 15.1093096 3.6786579 9.2947411 11.0195477 1.9528554 7.1041469 NA 14.9270815 4.9938645 NA 6.7601930 NA 1.5743438 9.6132449 12.3333818 10.1453200 11.9742446 10.0537019 8.7362135 -1.7475843 10.7245809 8.3265391 4.8069890 7.4147892 NA 11.9040101 13.2291409 7.2764567 9.8935464 11.7101634 10.5601678 -1.7475843 -1.7475843 7.9230541 8.9186218 10.7087521 -1.7475843 5.3609226 6.6786621 11.6794487 10.8115358 4.5191833 5.3504301 3.2524005 10.3178139 11.6427011 0.8373782 13.9054667 5.2523967 7.6209045 12.8691189 10.8017012 12.8304756 8.8326562 10.0967112 11.8622690 11.2170996 10.2861649 3.0072852 7.7818285 12.3602687 12.3601052 NA 10.1134847 10.1637898 -0.7475843 1.2577951 9.8989565 9.4354127 9.8213040 9.6580711 15.0810797 10.5053588 11.5504603 8.1041469 2.4223137 16.2454135 6.0852887 12.8367144 11.4099026 9.6948229 8.3791024 6.5144931 9.7128793 -0.00152430 0.77003000 1.49380000 -0.02109800 -0.02109800 0.75891000 0.77252000 -0.00553750 -0.88144000 0.49320000 0.50116000 2.91230000 0.00180300 -0.00055444 -0.01367700 -0.01367700 -0.01367700 0.02806000 -0.00493430 -0.64284000 0.00000000 0.00861350 0.81591000 0.81591000 0.81591000 0.05447200 0.05447200 0.06852200 0.80480000 -0.00152430 -0.00152430 -0.00971670 -0.02109800 0.79007000 0.75204000 0.77252000 0.77252000 -0.00553750 -0.88144000 -0.02780800 -0.01656700 -0.01656700 -0.89634000 0.78022000 0.78022000 0.78022000 0.78022000 -0.00055444 -0.00055444 -0.01367700 -0.01367700 0.00513590 -0.00493430 -0.00493430 -0.64284000 0.00000000 0.00861350 -0.90179000 -0.84915000 0.81591000 0.77868000 0.05447200 0.06852200 0.80480000 -0.00415460 0.04004400 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 5.7522428 9.3855400 9.3996026 7.1041469 0.8373782 10.2974748 -0.1626218 NA 7.8671076 7.6077490 NA 5.9666427 -1.7475843 10.9079285 8.9571659 NA 3.5003304 9.8597281 10.1422820 10.4347921 9.9177204 7.7720341 9.9012047 1.5743438 9.0056144 8.7362135 -0.1626218 NA 10.0880535 2.5743195 12.0416257 11.8042262 7.1919771 10.0982798 11.7669886 9.1720059 -0.7475843 3.2065963 NA 4.0337578 6.7482532 5.6011260 10.7569685 1.4223407 2.7934173 6.0725775 9.9358311 7.7462530 10.1879311 NA 10.1403799 1.4223407 3.6786579 10.1517282 5.2078733 -1.7475843 6.4763995 7.7680976 2.5003177 NA 13.0947481 NA 9.0837051 NA 7.8031444 4.4618494 8.9734971 7.9441410 14.086894 4.678664 9.944141 11.841464 9.369391 11.378296 13.562158 12.483694 9.053298 10.352732 13.554251 9.436033 8.918622 9.199304 -1.747584 7.678663 11.094945 10.296450 6.899856 9.728638 8.252398 9.230393 9.944154 2.500318 7.323860 11.653144 7.153264 NA 8.663909 7.676480 9.994286 9.725596 11.301736 6.609950 12.457656 3.252401 10.145320 11.241615 11.784023 8.592248 10.494381 8.461851 NA 8.285477 6.728131 2.252385 10.811536 6.263624 10.391309 10.317814 7.004143 12.442145 10.586950 10.994497 12.480239 9.063773 10.026361 1.252416 TCGA-D8-A1JU 51 0 NA 447 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 2 4 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 1.112456e-07 10.98881063 10.86426741 6.65686815 11.73998882 0.64339445 10.91766708 NA 10.23137036 11.23623614 9.28075477 9.35627633 7.23137000 8.91019209 9.16696745 6.76442047 9.10283709 10.10570322 9.70787882 8.48386857 6.53093065 10.53336565 10.18798358 12.35515841 10.89843398 9.63945522 10.39929448 6.16068023 10.92603056 1.49139136 2.71378378 9.85626647 11.87546654 13.01969363 8.45846854 12.79588040 12.09224444 10.13285197 5.96533409 3.36587447 8.04428482 8.55149795 9.30660767 8.37268618 12.55726720 -0.09357114 10.55299852 12.82939581 5.28726173 9.68210500 10.16853461 9.88753136 7.51130199 NA 14.37515783 12.06504845 4.07636241 8.80428529 NA 5.08966339 9.99124816 10.17283601 10.17478690 10.13846099 10.26655536 9.87750424 2.02190608 10.71486780 10.15159629 5.44041740 8.07469381 1.78089798 10.71137746 14.37034730 8.03738771 11.17537165 11.14862154 7.75610526 0.90642886 3.49140419 8.41158979 9.61437416 11.65965658 NA 5.49140098 6.82530355 10.03829680 11.36723700 7.61839358 7.02538101 5.67902963 10.62981631 11.62682659 1.12882128 13.68074645 5.51130041 7.62068537 12.21960629 12.34860579 12.87318558 8.40362648 10.03185335 11.14245403 10.95399094 10.71647585 4.87606504 8.03915375 12.31317631 10.96420598 2.02190608 10.58650628 9.20106064 1.12882128 3.49421078 9.91253206 10.04982310 10.17361668 8.87989810 14.60992889 9.94215540 9.97879582 8.21477906 5.08966339 15.50749481 8.99036241 13.12742267 13.12787590 9.72235673 9.23436671 8.54668460 10.16380802 -0.0237030 0.4520700 0.4520700 0.0862330 0.0806010 -0.0184900 0.0962340 -0.0091286 -0.0091286 0.2007600 0.2007600 0.1989800 -0.0002298 0.0019418 -0.0018014 -0.0018014 -0.0018014 -0.0147780 -0.0138870 0.0895610 0.0777180 0.0953630 -0.0055375 -0.0055375 -0.0055375 0.0712480 0.5081100 0.5081100 -0.0077482 -0.0237030 -0.0237030 -0.0186280 0.0862330 -0.0200010 -0.0184900 0.0962340 0.0962340 -0.0091286 -0.0091286 -0.0091286 0.0975420 -0.3541900 0.2007600 0.0000000 -0.0018052 -0.0018052 -0.0012473 0.0019418 0.0019418 -0.0018014 -0.0018014 -0.0147780 -0.0124380 -0.0124380 0.0895610 0.0777180 0.0953630 -0.3543000 -0.0055375 -0.0055375 0.0920250 0.0712480 0.5081100 -0.0077482 0.0910100 -0.0165670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 9.4352196 13.6574608 6.9653329 10.7298071 2.8450484 10.5106842 1.4913914 0.6433945 8.0679914 9.7911191 -0.6785336 8.6374422 4.4712265 10.0223505 9.0780336 1.3214664 11.2753100 9.5094478 11.5964378 9.6218299 9.3164105 8.2551679 11.5043372 3.5309322 8.6646631 9.8775042 5.4089394 NA 10.4973387 3.2756776 13.0959555 11.9239442 9.2010606 10.6160980 8.5236012 9.5616723 2.9653410 2.2283570 0.6433945 2.7809190 8.5260485 8.9814731 9.6867062 7.4115898 7.3939584 5.5788663 10.3566201 5.6434060 9.4195094 NA 11.4761373 3.6068804 4.4712265 9.1987461 5.2021630 4.0763624 9.4520478 9.7623465 6.5502958 NA 13.8121089 1.3214664 10.3686012 NA 8.4365208 6.6921649 7.9921334 9.5211497 11.476528 3.679030 8.379469 12.795880 10.322182 10.534278 12.557267 11.649170 8.996296 10.512845 13.363906 9.396956 9.614374 10.754541 NA 7.776805 10.831252 11.397959 6.841114 9.014093 8.374045 7.343845 10.132406 6.419510 7.018445 10.898434 6.821324 4.387569 3.780908 4.693208 12.284283 10.545177 8.430002 8.419509 12.298847 7.201060 10.174787 10.558687 10.964657 9.937107 9.982810 9.343845 -1.678534 9.597206 8.105016 6.007978 11.367237 8.446891 10.661606 10.629816 7.191842 14.262319 10.121164 10.964206 12.943472 10.481979 9.929732 3.321481 TCGA-D8-A1X5 81 0 NA 565 breast stage iiic t2 n3a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 14 white not hispanic or latino 120.48.0 NA NA 4 3 NA NA 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.78719e-07 4.449823e-07 12.0513295 4.3581360 8.0726771 11.0947210 -0.1964423 10.5559310 -1.1966076 10.2049632 11.5673851 12.9665710 10.1101817 7.2629818 7.0371702 9.1807608 7.6205336 9.1489555 10.0860596 9.4006718 7.0889525 3.6615330 10.0964471 9.3368801 13.7068673 10.6482561 8.7059254 10.3393117 4.6861923 11.1001798 -1.1966076 NA 8.6599759 11.4653284 13.3758361 9.3339568 15.4143301 12.1712381 8.5005177 6.2547622 3.0514765 6.4759749 8.1277308 9.3133252 7.2256152 12.7489942 -0.1964423 9.2994054 13.3891584 5.5177953 9.3511775 11.7904590 7.7606521 6.3885133 1.1254527 13.7599446 10.0924164 2.8910108 7.9809701 NA 5.1434016 10.0556244 9.8969679 9.8923385 10.3903901 10.5369895 9.1969407 3.1958673 11.4262886 9.9896646 7.1299795 8.1141629 NA 11.0035294 15.1339246 8.5852052 11.5492247 12.2839619 7.8936625 1.1254527 0.3884651 9.1141632 10.1605524 10.4251443 NA 7.2129409 7.2547613 8.9871858 10.8963075 6.5517436 6.9634221 5.4900502 10.2588775 11.3130779 5.2129428 13.3198044 5.0889514 7.0935697 11.3120879 13.2347214 13.2048965 9.3542972 10.0038359 10.6816012 10.1768233 10.7123182 5.8369744 8.0419553 12.9365319 11.0761801 NA 10.2521829 9.6109052 1.1254527 3.2688685 9.8105776 10.5840901 9.7979037 9.0202961 15.2992961 10.4196396 11.2604181 8.0866389 3.5584391 15.7507723 7.7548347 12.2666915 11.6787237 9.2893796 9.1589015 8.5246494 10.9149794 -0.3898800 0.7305700 1.4424000 -0.4045100 0.7535600 -0.3915200 -0.3882800 0.6538700 0.4042700 -0.8028500 -0.8272600 1.1403000 0.4087800 -0.3943000 0.0139140 0.7753500 2.8269000 -0.3939700 -0.3927000 -0.3972000 0.3966200 0.0112610 -0.3924100 3.6569000 0.0485460 -0.0332690 -0.0332690 0.3551200 2.1977000 -0.3985700 0.6632700 -0.0033243 -0.4045100 0.0231450 0.0000000 0.0203430 0.0203430 0.6538700 0.4042700 0.4042700 0.0057210 -0.4152000 -0.0023817 -0.4023000 -0.3900700 -0.3900700 -0.4007000 -0.3943000 -0.3943000 0.0139140 -0.3985300 -0.3939700 -0.3927000 0.1764800 -0.3988400 0.3966200 0.0112610 -0.3821300 -0.3924100 -0.3824600 -0.3886200 -0.1110100 -0.0332690 0.4660500 0.0094491 -0.3835800 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 8.4071768 13.1201147 6.6739154 9.9865654 1.6108890 10.7559276 -0.1964423 NA 7.3847509 7.6953341 NA 8.8870296 0.3884651 10.9822152 9.1004666 2.5039847 7.8883585 9.9871857 7.2086919 12.2597764 9.4238252 7.4546020 10.0849008 2.7104373 8.3581391 9.1969407 0.8035577 4.9120750 10.6080848 1.9734643 11.6968518 12.2538595 6.7693341 10.6177322 8.4237702 9.5832697 5.7922359 1.3885202 0.8035577 2.2629743 8.8843678 9.5955272 11.6026296 1.3885202 8.4027567 5.7922359 10.0371700 7.3504451 10.4237702 NA 11.4595282 2.8910108 6.2873670 8.9659669 4.4827515 6.3192494 9.1004666 8.6364405 7.7635523 -1.1966076 12.6884840 NA 10.5617736 -1.1966076 5.8259179 4.0889557 7.1389404 9.8286900 13.6229466 5.9015813 8.1764155 15.4143301 9.4043925 11.2737007 12.7489942 12.5303007 11.1280122 10.5567002 12.9478899 9.3514088 10.1605524 9.1118894 0.3884651 7.2256152 12.4033470 10.605663 7.022718 8.528064 6.440175 8.204430 9.494002 7.388512 6.403464 10.648256 6.958368 2.803558 3.610901 7.832009 10.865259 9.617332 8.825918 9.369604 11.448308 6.853399 9.892339 10.325641 11.978476 9.388513 10.428803 9.231910 8.095872 8.768426 7.420136 7.056216 10.896308 7.998307 9.983155 10.258878 8.329071 13.841756 9.887030 10.133347 11.332981 9.731328 9.542487 2.891011 TCGA-D8-A1X6 80 0 NA 541 breast stage iiia t3 n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 5 white not hispanic or latino 124.53.0 NA NA 5 2 NA NA 1 1 3 5 1 1 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 5 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 1.112456e-07 11.55977767 3.58384398 8.68209429 11.50194026 NA 10.09567499 1.61419156 10.26825121 11.14802826 6.94811255 9.80732658 7.05991656 8.27954790 8.95924736 8.79412112 8.62730187 9.38515101 9.07569146 6.54494898 2.42155994 10.53332350 6.78079302 12.52928208 11.31045499 8.86293021 10.95016043 4.13777400 10.69656282 -0.38571419 1.19918548 7.95257702 10.41914962 13.29753553 5.72273650 12.34623797 12.91761215 9.25144051 5.89961311 -0.38571419 4.89961553 8.11671200 9.81633570 5.86845219 13.05750082 4.55281355 9.40862780 14.51897194 3.42157341 9.98020614 11.79764053 3.02924084 3.83660081 -1.97086520 13.97514332 11.80803392 1.02927618 8.59720562 NA 2.42155994 9.32960195 10.36072618 11.51470138 10.82000516 9.77618346 9.40645993 NA 10.63194823 9.55721497 7.95406192 7.78913779 1.19918548 10.93011622 14.12006480 8.08855347 11.47193376 10.50498281 8.30886004 -0.97086520 NA 8.32042014 8.58767027 10.69636095 -0.38571419 6.10606560 6.93313117 10.52535421 10.88742474 4.64396006 6.77408333 4.40429006 10.43837509 11.75525464 0.02927618 14.07276804 7.01793415 7.72447770 10.59601696 11.66802469 12.63484467 7.29837605 10.38515101 10.86746849 10.54357631 10.78747262 3.64396006 8.90269347 11.97414445 12.31298891 -1.97086520 10.65061451 10.14721714 1.72970503 2.61781565 9.51054424 10.63148430 10.06576643 9.05438888 14.66489667 10.29339877 10.29310547 8.73142222 0.35117600 16.14813979 5.30537231 11.93651564 11.72903871 9.34779231 8.97761651 7.40211416 10.02968961 0.0086135 0.0086135 0.0086135 0.0759910 0.0698120 -0.0148280 0.7199900 -0.0065050 -0.0065050 0.9534500 1.8349000 2.1896000 0.0120970 0.0120970 -0.3496600 -0.3496600 -0.3496600 0.0000000 0.0000000 -0.3580600 0.0141900 0.0332670 0.0279190 0.0279190 0.0279190 0.1017600 0.1017600 0.1017600 0.0343950 0.0086135 0.0086135 -0.3315600 0.0759910 -0.0148280 -0.0111980 0.7199900 0.7199900 -0.0065050 -0.0065050 -0.0065050 -0.0020784 -0.0020784 -0.9913700 -0.3485400 -0.3485400 -0.3485400 -0.3198400 0.0120970 0.0120970 -0.3496600 -0.3496600 0.0000000 0.0000000 0.0000000 -0.3582600 0.0141900 0.0245730 -0.7219900 0.0279190 0.0279190 0.0134920 0.1017600 0.1017600 0.0343950 -0.3421700 0.0432990 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.349 -0.349 0.000 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.349 -0.349 0.000 7.94662151 11.22631248 8.39228908 9.28073180 2.10564456 10.53208119 1.19918548 NA 8.40537466 4.84942887 NA 5.42156668 1.19918548 10.43012885 9.37076826 -0.97086520 7.01793415 8.41618950 12.03846568 10.50877704 9.49379522 7.03487378 9.15530854 4.50498261 10.92160250 9.40645993 2.78412703 NA 11.17677236 2.93613850 13.00245347 11.95276261 6.03487378 10.47115606 10.25957015 9.28013998 0.02927618 0.83657052 -0.97086520 7.95998687 8.95702744 9.48457662 9.76903001 1.83661091 5.89083334 7.57421355 10.69035939 6.45551464 9.56014346 NA 8.55965585 2.02924084 2.88723280 9.72718565 6.42576811 -0.38571419 9.54149606 8.27480210 3.75717263 -1.97086520 13.88209585 -0.97086520 10.27599002 -1.97086520 5.80403548 4.09534216 8.07500896 9.31580712 14.079489 5.790801 9.804448 12.346238 9.698134 11.025723 13.057501 11.976886 9.303628 10.628930 12.720339 9.804036 8.587670 8.704324 1.029276 7.799087 10.122997 10.624740 8.057156 8.502955 8.645798 9.408086 9.502884 7.463877 7.642118 11.310455 6.408627 1.936139 7.777442 7.450452 7.818783 9.696804 10.228449 8.526103 10.799913 3.959983 11.514701 10.528099 11.618432 8.913420 9.996836 8.580958 NA 8.690707 5.983445 2.116697 10.887425 5.377977 10.399664 10.438375 6.858972 14.108356 10.914755 10.225544 12.428527 9.565982 9.360166 0.351176 TCGA-D8-A1X7 40 0 NA 509 breast stage iia t2 n0 mx 2-10-2014 female 2010 NA NA other specify yes 0 white not hispanic or latino 124.53.0 NA NA 2 2 NA NA 1 4 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 8.343418e-08 12.4685926 4.3216323 8.0595851 10.9254105 -1.8682788 10.6729038 1.7167715 10.5214385 11.5234535 8.3473401 9.8975076 7.8966787 9.0152140 8.7547740 7.0684451 9.3903732 10.1190712 10.7483560 7.9439846 -0.8682788 10.0060201 9.2099580 14.1007439 11.1035303 9.9335155 11.4537352 2.9391701 11.2919905 -1.8682788 1.4537546 8.1978963 12.4440520 12.2377156 9.5533461 10.7924716 13.2924270 9.0197892 5.9327061 3.0386996 4.7465170 8.2059486 9.3743857 6.9327073 13.5969271 1.8322419 11.0067885 13.1559512 1.7167715 8.7349328 10.6921400 8.4390080 7.7556888 0.7167715 13.5897798 10.4370139 0.1318528 8.1289867 NA 4.4716557 9.9045341 11.2557668 10.0805394 11.5313521 10.2780576 9.4119979 0.4537546 11.6919011 9.8244226 6.2764650 9.2403315 15.5632721 12.4282932 14.7517548 7.5284760 11.0115818 11.7445604 6.6435604 3.9646943 -0.8682788 8.4705434 9.2179434 10.7389062 -0.2833163 5.3606241 7.5622600 10.1541750 11.5652621 9.6085533 5.5994130 3.8866965 10.9725850 11.8128259 0.1318528 13.9632133 5.7611629 7.3191591 11.8701105 11.6568385 13.0820440 9.0037124 10.2562516 10.9509883 10.9410286 11.4344461 5.3891951 7.7016627 12.6597117 12.0920806 -0.8682788 9.8858595 9.1569467 4.1541781 1.5938796 10.2614121 10.0167407 11.2126247 9.1918274 14.6777670 10.4469567 9.8921112 7.7900187 5.2610907 16.0353419 4.3216323 13.4019564 11.5709887 9.7158301 8.8235507 8.6034824 11.3383927 1.42780000 1.77220000 1.78370000 0.00069327 0.00069327 0.00485790 0.00319100 -0.01090700 0.00291330 -0.00263220 -0.00263220 -0.00263220 -0.00774820 -0.00774820 -0.01147300 -0.01147300 -0.01147300 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.01615400 -0.02205800 -0.02205800 0.62934000 -0.03299600 -0.03299600 -0.03299600 -0.01725400 -0.02041200 -0.00235530 0.00458000 0.00069327 0.00112070 0.00298770 0.00198020 0.00020901 -0.01090700 0.00291330 0.00291330 -0.00180140 -0.01789200 -0.00263220 -0.01298900 -0.01298900 -0.01298900 -0.01298900 -0.00774820 -0.00774820 -0.01147300 0.00180300 -0.00664320 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.01734100 0.65424000 -0.74412000 -0.02903800 0.00013863 -0.03299600 -0.03299600 -0.01725400 -0.00733390 -0.02329200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8916950 12.4898401 5.3509745 8.9717982 3.0454080 10.4472398 2.4537283 -1.8682788 8.3497647 6.9646967 NA 7.9857406 1.3017047 10.3588213 9.1576387 -1.8682788 6.1597139 9.7895721 10.4480886 10.0375702 10.4268987 8.1133744 11.0400120 3.0860024 9.4148955 9.4119979 1.5912486 NA 11.1657463 2.5912486 12.3738647 12.8250218 7.6075404 10.7729557 7.5809557 8.8174320 1.3017047 1.5912486 0.4537546 2.7167715 8.4537353 9.9086514 9.1652301 3.0860024 8.9648237 5.4172078 9.5353518 7.0052518 9.7007133 NA 10.8516237 2.3797318 9.9499898 9.7206013 6.7182342 3.3412599 8.7747614 8.2166154 4.2815573 NA 13.3081361 1.9391513 10.9739610 NA 8.9383567 5.3117174 7.7446758 8.6835154 13.3544424 4.8460520 9.2166154 10.7924716 10.5821808 11.2347670 13.5969271 12.2710387 9.0983127 11.2703989 13.6222820 8.9670680 9.2179434 8.5559733 -0.8682788 7.8059992 11.6157488 10.8846059 8.2285224 9.2751903 7.4241285 9.1911515 10.1454858 6.4537349 9.9074174 11.1035303 6.0386974 -0.8682788 7.1679811 7.7408932 13.0491792 8.2416376 7.3868359 8.0446963 12.6149931 4.7756616 10.0805394 10.2281929 11.8279053 9.4910077 10.5380121 9.8361432 NA 9.4947592 8.0085390 5.1204930 11.5652621 7.0947027 9.7381152 10.9725850 7.4333033 12.9275424 10.0458185 10.3806242 12.7867228 9.9391621 9.6656235 -0.2833163 TCGA-D8-A1X8 62 0 NA 783 breast stage iiia t1c n2a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 9 white not hispanic or latino 124.53.0 NA NA 2 2 NA NA 3 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4.171709e-07 2.224912e-07 11.13081558 8.66131458 7.05923845 10.99589001 2.51835888 10.42891610 -1.65154094 10.19196009 11.32410048 7.56031984 9.58623913 7.73429368 9.48349960 8.41989404 7.93339382 9.59813776 10.26692226 9.71311342 7.71256621 3.70598896 9.47900213 9.55849419 9.80324496 10.64190326 9.19313747 10.75304104 5.92585941 10.67317469 -0.06657844 1.34845906 8.87199361 12.02604117 12.96187578 7.05233546 13.18812750 12.47932389 8.38185482 7.26431123 4.57724754 7.15256271 8.64305238 9.07890172 6.94834504 13.59305560 2.87200131 9.67822793 13.84222453 8.59991396 9.42718292 11.04278953 4.32571021 8.67710650 -0.06657844 14.04689212 9.97002563 2.04886391 7.92018431 NA 5.16860995 9.70543368 10.55055547 11.45368537 10.96543987 10.48862235 9.63151995 4.68828109 11.84366208 9.89773506 5.80786235 8.79861177 3.10331299 11.52117164 14.50313108 9.22588439 12.27491293 11.36489171 7.95391123 1.67034183 3.96314116 7.57484401 9.27695000 13.33893450 NA 4.79137651 7.00306810 10.23945580 11.73980946 6.20018063 6.18132124 4.70598343 11.03733754 11.81972577 3.30262613 13.51956931 4.32571021 7.47513597 11.86289910 11.11413208 12.94520375 8.19078176 10.09242444 10.99589001 10.95603240 10.85275405 5.44646468 8.21261797 11.52569541 10.80555591 -0.65154094 10.25719948 9.10164824 -0.06657844 2.35202400 9.93667783 10.57484383 10.16581499 9.12897126 14.57779497 10.06824825 9.90971956 8.62571907 2.51835888 16.67641399 10.86855914 13.05767701 12.19636981 8.82618999 9.63729760 8.90780882 10.44456696 -0.00235530 0.45956000 0.45956000 0.00000000 -0.00527110 -0.00719580 -0.00069303 0.00013863 -0.00830050 -0.52788000 0.00013863 0.00013863 0.00444110 0.00444110 0.00569190 0.54983000 0.51037000 -0.00913150 -0.00588210 -0.00581400 -0.00121130 0.00694350 0.00889200 0.00889200 0.00889200 0.00458000 0.00458000 0.00458000 0.01684500 -0.49371000 -0.00235530 -0.01103300 0.00000000 0.01922300 -0.00719580 -0.00069303 -0.00069303 0.00013863 -0.52961000 -0.00830050 0.00152550 0.00152550 -0.52788000 0.00263570 0.00263570 0.00263570 0.00263570 0.00444110 0.00444110 -0.51029000 -0.51166000 -0.00913150 0.00346870 0.00346870 -0.00581400 -0.00121130 0.00694350 -0.51125000 0.00889200 0.00889200 0.00527490 0.00458000 0.00458000 0.01684500 -0.00110870 0.02567100 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 9.0924244 12.3452581 5.4358952 10.2832282 4.2310714 10.3721860 1.5183337 0.9334216 8.3127727 8.0012764 NA 8.0756711 2.4358952 10.3420777 9.2241809 2.3484307 10.0336185 9.4777146 10.2064126 9.5832490 9.9255771 8.1541756 10.8778622 4.5382588 8.5517798 9.6315200 5.5578849 -1.6515409 10.5520855 4.5772475 12.5221088 11.7357758 8.7610013 10.6536384 8.8382796 8.8621591 3.5578879 2.6703645 NA 3.3484307 8.6601799 9.9035000 10.2299281 5.8562263 7.3691340 5.4569572 10.5706228 5.9333932 9.4621738 -1.6515409 11.6185809 2.7407549 5.2672961 9.6704442 6.6084574 4.5578879 8.9886765 8.6233921 9.7934464 NA 13.8114770 0.9334216 9.9230251 -1.6515409 7.7212968 6.1876351 7.6476397 9.4319110 13.449133 5.155786 8.597545 13.188127 10.441519 10.819090 13.593056 12.445558 9.709504 11.185074 13.269901 9.574242 9.276950 8.449094 1.518334 7.348432 11.199204 11.08059904 7.69272777 9.11164405 8.43589441 8.93433309 10.41116584 7.51333835 6.18132124 10.64190326 6.79964298 -0.65154094 3.51835888 6.37096633 10.53794733 9.95020243 8.24612587 7.45171968 12.82631633 5.87981357 11.45368537 10.60640864 11.57318699 9.73967515 10.71475381 8.74610614 -0.06657844 8.97989958 6.65221256 5.46737405 11.73980946 7.51835652 10.01398963 11.03733754 6.87590904 14.09145149 9.53887354 10.32785676 12.98720689 10.02350654 10.03973898 2.34843073 TCGA-D8-A1X9 66 0 NA 727 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.185488e-06 5.897349e-07 12.21185721 5.21654023 5.94168149 11.07282979 -0.98307586 10.88549925 0.60179158 9.67016246 11.48600259 9.94982248 10.02284493 7.51272466 9.00768271 10.52243304 6.94464765 8.94982233 9.76925023 10.14647461 7.49057494 4.67508198 10.62443104 8.81209739 14.46959344 10.97251949 9.15578136 11.26108472 5.86235964 10.68352409 -0.98307586 -0.39820842 9.09168000 11.26879572 13.70126208 8.01122278 13.59379672 13.54989507 8.59240882 4.61678113 2.01685285 7.24809076 8.58672534 7.76506261 6.93871040 13.34582494 1.71729805 11.54739782 13.73652577 NA 9.36038293 11.37812803 6.76506261 7.96377581 0.01692414 14.52439759 11.16129523 0.60179158 7.44313418 -1.98336106 5.20669401 10.27631857 10.53675154 9.10632005 11.07079543 9.91962150 9.25944834 -0.39820842 11.98066878 10.61840826 6.85922043 8.22997383 -0.39820842 10.29270308 14.55931204 8.18153792 11.15386068 11.95562216 10.75221404 3.94761006 4.50872020 8.33428223 9.42466852 10.24568829 NA 6.97976586 7.39841280 10.27631857 11.48638420 7.13061175 7.00839164 4.55603083 10.39109405 12.08774522 3.99414522 13.92053963 4.82422305 6.79165651 12.05441652 12.56869797 13.82364573 7.15129566 10.71231540 10.67753405 10.39778243 11.65247435 5.38319278 8.34666575 11.87756862 13.30555545 -0.39820842 10.11094730 9.28189851 1.71729805 2.70617688 9.10632005 9.87718059 9.84341814 9.52168857 15.33808425 11.24388379 10.04304711 7.41133218 3.71730902 15.04805384 5.09368693 11.99584811 10.68531139 10.31865149 9.42626056 8.36670382 9.95591982 0.0069435 -0.0136770 -0.0063668 0.0080567 -0.0016629 0.0000000 0.5852400 0.5331900 -0.7482000 0.0234260 0.0234260 0.7055100 0.7012000 0.0044411 0.0090312 0.7732900 -0.7312600 -0.0153290 0.7109500 -0.7584900 0.7222500 0.1007400 -0.0299940 0.6581100 1.2777000 -0.0469890 -0.0398010 -0.0678600 0.7220600 -0.0189020 0.0069435 -0.0142280 0.0080567 -0.8372800 0.1340600 0.0045800 -0.7312600 0.5533700 -0.7482000 -0.0245240 0.6888200 0.0001527 -0.7582300 -0.6157500 -0.6157500 -0.0055375 -0.0166080 0.0044411 -0.0100940 0.0122370 -0.7445600 -0.7556400 0.0034687 -0.0224690 -0.7365400 -0.0306770 0.0019418 -0.7769400 -0.7763700 0.6581100 -0.7409200 -0.7788800 -0.0709100 -0.6089300 0.0157270 -0.7743100 0.701 0.701 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 0.701 0.701 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 8.55990130 13.41303951 7.62973837 9.24207702 2.38981458 10.83185255 1.18681746 -1.98336106 8.32293132 7.81776969 NA 8.31477174 1.71729805 10.69920588 9.23422155 3.37442746 8.16915436 9.47116896 10.16598151 10.07181294 8.87936760 8.92376008 10.55990139 2.54042410 8.40703870 9.25944834 0.01692414 NA 10.32606169 1.01685285 11.51185013 12.67139374 7.41347477 10.15354038 10.78505394 10.15097492 4.12539487 5.19678013 -1.98336106 2.77175884 8.15642089 8.59335377 10.16312005 1.82423833 9.24170936 6.07215297 9.73068563 6.40488610 10.35644130 NA 9.34778655 3.84975912 6.67508057 9.40682341 5.99540763 3.50872020 9.02879566 8.99128431 6.06671781 1.01685285 13.11473711 -1.98336106 10.52019848 NA 8.13321364 3.84975912 9.04339290 8.07350750 14.371066 5.682205 8.867056 13.593797 9.631579 9.947237 13.345825 12.269609 8.474250 11.168045 12.840088 9.164074 9.424669 8.442086 NA 8.206694 12.942795 11.1000165 6.8465924 9.1849148 8.5733757 9.7953574 10.0182355 6.5676169 6.6498655 10.9725195 6.2695344 0.6017916 6.5167149 7.1419467 12.5213783 10.3209357 7.8810558 8.9652368 13.2095862 5.4005755 9.1063200 10.5315836 11.5850632 10.1833466 11.1371074 9.1748481 NA 8.8105867 6.7510030 5.1358098 11.4863842 8.4070387 9.6774450 10.3910940 7.4721969 13.4409046 10.6391502 9.8157464 13.1409505 9.6817613 9.7570719 1.3387952 TCGA-D8-A1XA 64 0 NA 839 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 120.48.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 2 0 0 0 4.449823e-07 8.343418e-08 11.7961153 6.3637475 6.9175809 11.8914756 1.2833884 10.2214842 -0.3015148 9.7075412 12.3688473 12.8351632 10.4891681 6.7263190 9.5399767 9.7765631 6.6870971 7.9463396 10.8702147 10.1675453 6.9368169 0.6983963 11.5197877 9.7096396 14.1146821 11.3523770 9.5749293 10.8907052 4.5563926 10.7200864 NA 1.0203422 7.6142917 10.5913346 13.3159946 6.1078029 12.8151624 13.0170258 10.0124290 5.6409274 2.5057639 8.0338029 8.0971562 9.8134561 7.4665969 12.8896258 -0.3015148 10.8761433 13.8499839 4.1246755 9.0584802 11.4595480 7.0690996 6.5871549 0.6983963 13.4087189 10.9130350 -1.3015148 6.2530003 -1.3015148 3.0203422 10.0987581 10.8832877 9.4280331 9.5105897 9.6627533 9.3323157 -0.3015148 12.1958900 10.4867228 6.3849132 7.6438562 2.2833884 11.1175825 14.5863945 9.6538952 12.5074771 11.7480908 9.2711126 1.8683312 5.4665978 8.3530484 9.9843924 11.1426508 NA 5.1078050 7.9675393 9.6379916 11.8160554 6.5992791 6.0647341 6.5249601 10.1480769 11.4307918 1.8683312 14.0922720 6.6350506 6.8882367 11.1537395 11.7352728 12.5359417 7.6379913 9.7732228 10.4478629 10.2576652 11.9957586 5.3277700 8.7054396 12.6893141 8.4549688 -1.3015148 10.6620310 9.1670365 0.2833292 3.2238550 9.5217796 8.1309540 9.8481595 9.8141062 15.1028055 11.2261337 10.2467526 8.3548374 4.3422703 15.3463204 7.9005360 14.1811258 10.8475243 10.1485926 9.2871271 8.3918992 10.6438123 0.10001000 0.10001000 0.10001000 0.10045000 0.10045000 0.11224000 0.83903000 -0.72305000 -0.69808000 0.09361700 0.09361700 0.09361700 0.05993400 0.06952200 0.08377300 0.08377300 0.08377300 0.07699500 0.07699500 -0.69823000 -0.70505000 0.00263270 0.00000000 0.00000000 0.00041298 -0.11273000 -0.11273000 -0.11273000 0.73056000 0.10001000 0.10001000 -0.68377000 0.10045000 -0.74260000 0.13080000 -0.70001000 -0.70001000 -0.73258000 -0.69808000 -0.74268000 -0.24095000 -0.26292000 0.09361700 -0.71738000 -0.71738000 -0.71738000 -0.78299000 0.06952200 0.06952200 0.08377300 0.08377300 0.07699500 0.07699500 0.07699500 -0.68387000 -0.70505000 0.00263270 0.01474600 -0.78379000 0.00000000 -0.65715000 -0.11273000 -0.11273000 -0.75000000 -0.26973000 -0.78833000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 8.0885816 12.9230924 3.9838145 8.9296336 4.0762341 10.3988521 2.3988429 NA 7.8017000 7.1619370 -1.3015148 6.0293292 4.9078665 9.5478175 9.8309121 3.0907349 8.0756230 8.6728270 9.9103006 9.9157642 9.2080092 8.3038917 9.0570636 2.2833884 10.3085145 9.3323157 2.2833884 NA 10.9663695 2.5057639 13.0708013 12.4434564 6.8069362 9.2786708 9.4549688 9.1120404 1.8683312 0.6983963 0.2833292 6.8121542 9.1340825 9.3512573 9.8950145 2.0203422 8.0200021 7.3167974 9.6670791 6.8980850 9.7089404 -0.3015148 12.2288187 2.6984185 4.0203422 9.5360797 7.8729635 3.8276971 8.9698754 7.7671906 5.4533003 0.6983963 13.6299809 NA 11.4814106 NA 6.5121937 3.9078617 7.6496974 9.0090252 13.912238 5.698413 9.178193 12.815162 9.487946 10.632840 12.889626 13.420152 9.310682 11.240932 12.451316 10.245307 9.984392 8.502543 1.698396 6.983814 12.735874 10.416945 8.755050 8.780561 9.820593 9.090730 9.795239 6.764501 9.832197 11.352377 6.675692 -1.301515 3.946338 9.204343 10.423353 9.665639 8.453300 9.308514 14.495187 5.141355 9.428033 10.039375 11.320693 9.972791 10.267319 9.785212 1.283388 8.922619 5.327770 5.342270 11.816055 7.033803 10.391028 10.148077 8.107867 12.671390 10.572625 10.235631 13.198943 10.390156 9.652609 1.020342 TCGA-D8-A1XB 62 0 NA 552 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 120.48.0 NA NA 2 2 NA NA 1 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.39057e-07 11.7508214 7.2676519 6.9099663 11.2217098 -1.1291027 10.7798146 0.8710551 10.9171476 11.9215757 10.9834863 9.6074487 6.9795715 8.7794393 9.3477930 7.9611591 9.0521990 10.4880550 9.6983895 7.7444908 1.6783875 11.1228250 10.3548626 13.7719136 10.7999352 9.8433087 10.9320804 4.1929753 10.5328204 NA 2.4560176 8.3548625 12.7115297 12.5949210 7.6687084 12.6273946 13.0486220 9.8547529 6.6057565 4.6784044 6.9690791 8.5363828 9.7383255 9.0372098 12.7230886 2.0409625 10.1070610 13.1704695 6.0409713 9.5115177 11.2761882 8.0583988 6.8766716 NA 13.3799359 9.2665809 4.2633650 8.2973116 1.8710551 4.9154396 10.0150676 10.1912832 10.3268877 12.6973966 10.2103400 9.9168064 2.4560176 11.6743707 10.3936283 7.2846751 7.8397134 8.9651245 11.3009765 15.1060139 9.2179926 12.0604081 11.5870088 9.1839298 2.3304724 6.5434727 9.2362757 9.4672365 11.7563618 NA 6.0105986 7.3748726 9.8135612 11.2343602 7.0105986 5.8368305 5.0207955 10.2655094 12.0817181 1.1929516 13.2035030 6.1284336 6.9847887 12.2748577 13.6569590 12.9218307 8.1839296 10.5474446 11.1346094 10.8795910 11.4038897 5.5149018 8.5452390 11.6818192 11.8252431 -1.1291027 10.4949283 9.4004773 -0.1289449 3.8597311 9.8759694 11.0324936 10.5314884 9.6091390 14.4186342 10.4908083 10.2170064 8.5938542 3.9154444 15.2096439 9.7498641 13.3372507 12.0998655 10.1685362 9.6840262 9.0321786 10.6458339 -0.0173910 0.6758600 0.6701100 -0.1173600 0.2134500 0.0274970 0.3307600 0.0000000 -0.4114600 0.3442100 0.3392200 0.3392200 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0146090 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2030900 0.1096400 0.1096400 0.1096400 -0.0058140 -0.0058140 0.0141900 0.1370200 -0.0253180 -0.0173910 -0.1734800 -0.1173600 0.0274970 0.0265140 0.3307600 0.3307600 -0.3466400 -0.4114600 -0.1547700 -0.1151500 -0.1065700 0.3442100 0.1348000 0.1348000 0.1348000 0.1841900 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0048579 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2061000 -0.3033400 0.1096400 0.1096400 0.0440070 -0.0058140 0.0141900 0.1370200 -0.4000800 -0.1617900 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 9.3119158 14.2229522 10.0926339 10.2433678 3.0409801 10.4024282 -1.1291027 0.4559650 8.1518177 8.9330928 0.4559650 8.7436910 2.9585086 9.7913996 9.5372708 3.8710452 8.4635039 9.4802255 11.0593265 9.3926471 9.6317500 8.1070612 10.7102506 0.1519887 9.7282503 9.9168064 2.9585086 NA 10.5189548 2.7779352 12.5822835 11.9852771 8.3406887 9.9847890 7.7290279 9.1401736 5.8934156 1.8710551 0.8710551 8.0509560 8.5149030 9.0447239 8.6928209 3.9585086 7.2983174 5.4256372 10.3867466 6.7227952 9.5671450 NA 10.8654002 2.5714827 3.9585086 9.3345506 4.1623551 3.6259367 9.6767907 7.6023656 5.6654638 0.4559650 13.4982957 0.4559650 10.3543587 NA 9.1010672 3.6783987 7.8425905 8.6209163 12.826544 5.425637 8.655682 12.627395 10.284675 10.777562 12.723089 12.355870 9.313503 11.182455 13.200983 10.313472 9.467236 10.729416 1.456018 7.398524 11.295476 11.662617 7.452247 9.124894 8.966444 9.199722 10.812879 6.665462 7.649124 10.799935 6.691226 5.691227 6.402429 7.223664 12.857778 10.263364 8.350827 8.607449 13.185984 5.060873 10.326888 10.112434 11.354107 10.175398 11.040659 9.624264 NA 9.572093 7.799713 5.514902 11.234360 8.863985 10.684026 10.265509 8.274059 13.780424 9.861151 10.349311 13.030209 10.973022 10.277783 1.678387 TCGA-D8-A1XC 85 1 377 81 breast stage iiib t4b n1a m0 2-10-2014 female 2010 NA NA mucinous carcinoma yes 1 white not hispanic or latino 120.48.0 NA NA 2 2 NA NA 1 4 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.112456e-07 11.764901 1.409907 7.946488 10.543487 NA 10.670052 NA 10.150260 11.901770 6.880237 9.924960 8.128735 9.390057 8.780604 7.909763 9.009830 11.374017 9.770398 6.796498 -1.174947 10.191823 9.614488 14.079282 11.929881 9.763064 10.968975 1.632315 10.190167 -1.174947 2.632315 5.767469 11.094958 13.324676 6.755691 11.524310 13.300498 9.317809 5.984826 1.632315 6.208660 8.114973 9.893061 4.034409 13.975178 4.217269 10.785318 14.198907 5.552875 9.264006 10.501352 8.244915 8.983564 NA 14.338507 8.614472 4.657846 8.696860 -0.175110 3.682933 9.779878 10.780968 10.172022 10.430434 10.490735 9.607953 NA 12.000660 9.993000 7.096418 8.056175 14.640713 12.183194 14.897213 6.857221 12.032884 11.787670 6.852860 -1.174947 7.225834 8.736346 8.806522 9.633919 NA 3.579844 7.539200 9.278225 11.013543 11.628278 3.217277 3.217277 10.753103 11.577753 -1.174947 13.278997 7.417411 7.807948 10.619370 8.933479 12.897338 6.664159 10.509703 10.537052 11.195914 11.593966 5.234344 8.160345 11.874463 12.721192 -1.174947 9.854242 8.493839 -0.175110 2.732812 10.408037 10.548616 9.879559 9.078802 14.639312 10.331262 9.958739 8.912417 3.284381 16.245622 7.796498 9.996757 10.831982 10.199994 9.036843 8.274103 10.784243 -0.00636680 0.77118000 0.78736000 0.00188560 0.00541390 0.00332990 0.00041593 0.00069327 0.00069327 -0.00318590 -0.00318590 -0.00318590 -0.00484610 -0.00484610 -0.00318590 -0.00546520 -0.00546520 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00885260 -0.01532900 -0.01532900 -0.01532900 -0.01725400 -0.01725400 -0.01725400 -0.01174900 -0.00636680 -0.00636680 0.00162770 0.00188560 0.00332990 0.00332990 0.00041593 0.00041593 -0.87829000 0.00069327 0.00750000 0.00000000 0.00000000 -0.00318590 -0.00733390 -0.00733390 -0.00733390 -0.00733390 -0.00484610 -0.00484610 -0.00318590 -0.00546520 -0.00346270 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00885260 -0.00456950 -0.01532900 -0.01532900 -0.00055444 -0.01725400 -0.01725400 -0.01174900 -0.00124730 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.7733212 11.1152614 0.4099068 9.7355973 2.2843957 9.6290855 NA NA 7.9150667 6.1103570 NA 5.5253955 NA 9.9004336 9.0645531 NA 4.3168047 9.4117942 12.6053918 9.2396398 10.3117644 7.9044395 10.2247665 4.0344094 10.6716202 9.6079528 1.9948693 NA 10.6042635 3.3485157 12.2595827 12.3627796 6.2428064 10.9819856 7.0585741 8.7718608 -1.1749471 0.8249715 1.1468507 6.4396647 8.8122184 10.0740680 9.2258340 -0.1751100 7.5195907 6.2172714 10.3577974 7.7791507 9.0669376 NA 13.4758380 0.4099068 10.5583936 9.2944436 6.4577322 NA 7.6419383 6.7014714 6.9071034 NA 13.2788682 -1.1749471 10.5383411 NA 8.7378439 4.9747037 7.3445906 8.8693486 13.6875032 3.3485157 8.8022346 11.5243101 10.3198101 10.4960532 13.9751778 13.6182530 8.9137427 11.1063050 12.8975896 11.1355673 8.8065219 6.3168083 0.8249715 7.1868987 11.5434874 10.7849565 8.7849564 8.9580968 8.4920659 8.3891038 10.3766868 5.9229875 9.0295258 11.9298808 7.0585741 NA 7.2761654 7.4512111 9.0344078 10.2284992 8.3543852 8.4831660 12.5517048 1.9948693 10.1720221 10.4127320 12.2139135 8.9606637 10.7003199 9.6852657 NA 9.0613396 9.9402063 0.4099068 11.0135434 5.1468833 10.9167270 10.7531027 7.4359794 13.3615660 10.2097382 10.2172719 13.2699694 9.7333471 10.1120897 NA TCGA-D8-A1XD 36 0 NA 522 breast stage iiia t1c n2a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 120.48.0 NA NA 5 4 NA NA 1 1 3 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.7422348 3.6646876 5.7608969 11.6378106 1.1286233 10.6658479 -1.1933047 10.2155618 12.3549212 6.3535950 10.3593705 5.5615889 9.9564485 9.8038809 8.4755863 7.2245536 11.8944957 9.8646930 7.3535959 0.8066953 11.3419767 9.7550687 14.1433474 11.3538369 9.6931600 11.0167639 3.6646876 10.7311428 -1.1933047 4.0546314 8.2097136 12.6233851 12.7115241 7.5715729 13.2961730 12.5801497 8.7638033 6.7839817 3.8941678 7.8235099 8.7225808 7.9716085 8.2350617 12.9712941 2.1286233 8.2965492 13.6966330 5.2985557 9.3232681 11.7032230 6.4577535 3.8510994 -1.1933047 12.0595988 9.7337385 2.6140502 7.8095161 0.8066953 3.9359877 10.3698976 9.9822509 10.0938365 11.4061493 10.4314968 9.4296683 3.2661269 11.8409845 10.5375960 7.2245536 6.0258704 12.2102460 11.7895167 15.2185102 8.4602810 12.0106610 12.0689431 7.8262923 1.3916578 6.5481684 8.6268804 9.7839812 11.0549254 3.0546228 6.3689429 6.2985538 10.4835399 11.0842794 5.6268801 4.0921059 5.0546271 9.1587447 12.1325689 1.3916578 13.3477980 5.9965266 6.8673974 12.5050805 13.1380382 13.1265146 7.5209471 10.0276842 11.1373382 10.9001387 11.5717802 5.7492151 8.8727906 12.0781644 13.2835108 -1.1933047 10.2702257 9.1620524 NA 3.9786258 9.2814212 10.7648916 9.8687476 8.6076011 14.3070142 10.4378784 10.1801103 9.1708359 3.9766294 14.8655175 9.7989317 12.5082244 10.6958250 10.8304557 9.6654594 8.7344793 10.1030326 -0.00069303 -0.00069303 -0.00069303 0.00180300 -0.00341970 0.00221930 0.00000000 0.00085121 0.61407000 3.34840000 3.65690000 0.67734000 0.00110930 0.00110930 0.00805670 -0.00346040 -0.00346040 0.11448000 0.11448000 -0.64274000 0.00708260 0.01042400 -0.00391880 -0.00391880 -0.00391880 -0.01340200 -0.01340200 3.65690000 2.16990000 0.01070300 -0.00069303 -0.00629240 -0.00341970 0.00221930 0.00221930 0.00000000 0.00000000 0.00736090 0.00055459 -0.00705760 0.00000000 -0.00620370 -0.65752000 -0.00885260 -1.29290000 -0.63273000 -0.62570000 0.00110930 0.00110930 0.00805670 0.00750000 0.11448000 0.11448000 0.11448000 -0.64274000 0.00708260 0.01042400 -0.00471620 0.00652620 -0.00391880 0.01126100 -0.01340200 -0.59808000 -0.63045000 0.70495000 -0.62627000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.663 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.663 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 8.9940536 13.7512304 9.5088741 10.0492801 4.8669673 11.2126405 -0.1933047 NA 8.1817406 8.6584504 -0.1933047 8.5683856 2.5071350 10.1984820 9.7768072 3.1990127 6.7608982 9.0804970 9.3015570 9.3065473 9.4057773 10.6977255 10.6108324 2.1286233 9.8524610 9.4296683 7.3419769 NA 10.1070540 2.6140502 12.0518083 11.8926717 7.1241141 9.9653110 6.9411274 9.4451372 7.0161542 0.3916578 -1.1933047 6.6332496 8.7270542 8.9230455 9.5235208 3.9766294 7.6356949 6.5209471 10.4451373 7.0546293 9.6631268 -1.1933047 9.9126099 2.7135858 4.3302644 9.4788527 6.2799207 4.0546314 7.9940536 6.9256423 6.9204434 -0.1933047 13.2915872 1.1286233 10.6642937 NA 8.2537846 4.0921059 7.5380205 8.4666973 14.530705 4.976625 8.487940 13.296173 9.283447 10.065856 12.971294 12.027986 9.427837 11.398457 12.417034 10.537172 9.783981 8.979129 NA 7.551535 14.077252 10.757622 6.298554 8.987853 9.581488 9.167548 10.189012 5.199021 9.051065 11.353837 5.601117 4.894163 5.376558 8.343784 13.128629 10.502365 8.546482 9.578191 13.784652 5.520947 10.093837 10.334667 11.478685 9.898137 10.105909 9.864016 NA 9.481838 6.795386 5.216094 11.084279 8.803881 10.127502 9.158745 7.946252 13.351485 10.398224 9.962784 12.274816 11.637811 9.484421 1.128623 TCGA-D8-A1XF 45 0 NA 463 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 120.48.0 NA NA 5 3 NA NA 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 2.503025e-07 12.91942350 5.21102388 6.01448474 10.90542995 0.06805164 10.66797770 0.80504476 9.56591661 11.78374090 11.19240163 9.77829730 6.85814142 9.46894431 9.23798979 7.17658906 8.48872708 10.15464346 10.59912137 6.02999611 1.65301414 9.86193909 9.83680055 14.49415486 11.86505081 9.38924133 11.31777093 4.38999350 10.21059744 -1.51704849 -1.51704849 7.48310231 12.72240254 12.70452560 8.56258703 12.97639493 12.58195690 9.36498098 6.65302705 3.97495141 3.97495141 8.60722377 9.04247937 6.72150664 12.99750821 -0.51684205 10.03529110 14.05896655 1.48310634 8.73340078 12.05651285 6.60204408 6.96691837 0.48305474 13.63257204 9.70227088 2.57056008 9.29447716 1.48310634 5.27751989 8.64549380 9.35731535 9.45823373 10.22077226 9.68277465 9.46680859 6.75922642 11.84833120 10.78259662 5.96691722 8.56258703 2.48310634 10.94483759 14.17642596 10.37166678 11.15927982 11.95401538 7.16609678 0.48305474 6.53838451 8.01253292 9.17135271 9.60398827 -1.51704849 5.19734646 7.21102290 11.34050024 10.24506907 6.70227106 4.63284983 4.00666606 11.38000232 11.75762611 8.17135246 13.30088548 4.34108200 6.89673079 12.24049236 12.04820444 12.85759851 7.68031873 10.35115325 11.24382228 10.93247285 11.51307972 5.40589368 8.12515410 12.06512669 11.68736781 NA 9.27507924 10.60754679 3.23799194 2.39478850 9.55858143 10.29848569 10.87970714 9.72806080 14.81931251 11.18873471 11.24195015 6.86248115 0.06805164 15.90338335 9.63030736 9.68216120 10.00764403 9.90253596 8.61238531 8.09965131 10.72215185 -0.46345000 1.15890000 0.81642000 -0.00027724 -0.00027724 0.43142000 -0.48302000 -0.00041585 -0.47902000 3.65690000 1.90780000 1.92090000 1.19390000 -0.46664000 0.79529000 3.65690000 1.52690000 0.00000000 0.00000000 0.40644000 0.43598000 -0.44566000 -0.46334000 0.42671000 0.42671000 -0.01958900 -0.01958900 -0.01958900 0.39280000 -0.43940000 -0.46345000 -0.02809900 -0.00027724 -0.48428000 0.43142000 -0.48302000 -0.48302000 -0.00041585 -0.47902000 -0.47902000 0.41831000 0.41915000 -0.03883400 0.40411000 0.40411000 0.40411000 0.41451000 -0.46706000 -0.46706000 0.79529000 -0.47913000 0.00000000 0.00000000 0.00000000 0.40644000 -0.45982000 -0.44566000 0.41898000 -0.46334000 0.42671000 -0.00774820 -0.01958900 -0.01958900 0.39845000 0.86632000 -0.02109800 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 7.13056027 11.31500336 6.30328211 8.16434080 2.29045389 10.83348911 1.29048338 NA 9.05010767 6.62265367 NA 6.06806455 1.06805164 10.09781224 9.37336654 1.06805164 6.43729933 9.93688744 7.37184546 9.82183870 8.23065744 8.53838490 10.80840782 0.80504476 10.03384914 9.46680859 2.38997974 3.06806885 11.13751460 4.84065457 11.77930163 11.26528152 6.46609523 9.54041732 8.17833071 9.56125319 7.23129511 2.73103114 -1.51704849 0.06805164 8.74049014 8.36268554 9.59489000 3.73103114 8.70172613 7.16258267 10.42451684 6.59162706 10.04391287 -1.51704849 8.53974004 4.18354209 6.44310434 9.83688322 7.31085813 6.61752918 8.76038963 7.37792021 8.69984830 0.06805164 13.14443511 -1.51704849 11.43055667 NA 9.04820430 5.38999350 7.10148830 8.19734793 16.726519 5.805029 8.353467 12.976395 10.485896 10.449247 12.997508 12.444009 10.543798 11.062183 12.482398 11.782883 9.171353 7.251286 2.805024 7.428546 12.436571 11.673236 6.905167 7.793715 9.997323 10.628398 11.012347 4.290454 10.806439 11.865051 6.754566 -1.517048 4.892493 10.137237 11.292067 9.143990 8.351925 10.282384 11.155528 7.627761 9.458234 9.290457 11.666428 10.230037 10.835146 9.553894 -1.517048 8.904704 4.468375 7.938429 10.245069 5.612385 11.286224 11.380002 7.834042 12.821003 9.500607 9.310445 12.261693 11.129436 10.188303 3.126956 TCGA-D8-A1XG 86 0 NA 448 breast stage iiib t4b n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 120.48.0 NA NA 3 4 NA NA 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.39057e-07 12.0086754 NA 7.7818528 10.6021887 -1.3703403 11.1053013 NA 10.4113374 11.2405927 8.0516326 10.0730294 7.9033637 9.5808525 9.1073262 8.9838173 9.2359730 9.9904149 10.2689086 8.0910471 -1.3703403 10.2069967 10.0500545 14.1612235 11.5047412 9.6773735 11.1482210 0.9515132 10.2322667 -1.3703403 0.2144979 7.1333940 13.7984358 12.8442664 8.4092874 11.4573075 13.2244756 10.1793526 6.6956570 4.0889981 6.7639944 7.8703592 10.0516326 9.0325800 13.7663187 1.2145600 10.5202121 13.7597764 6.7223253 9.4942880 10.6702001 7.5924638 8.8845964 0.6295665 13.3624693 8.2461168 3.4875507 8.4369226 NA 3.3844505 10.1984740 10.7585288 10.0368356 10.4150203 10.3579136 10.0915588 1.4369081 11.8618389 10.2949037 5.9871207 8.6281582 13.8360862 12.5211617 15.4681809 8.0867843 12.1593644 12.0983191 7.5454472 2.4369347 8.2405924 9.5243856 9.3317406 10.8304665 -0.3703403 5.7485095 7.7302303 10.1633843 11.0992096 9.1304097 4.7170293 4.0218883 10.4272293 11.5919217 -0.3703403 13.5002697 6.1918094 7.9424506 11.5445135 11.5761086 13.0509095 8.3574882 10.2285508 11.0234945 11.0451406 11.3581262 5.5720832 7.9915116 11.7732700 12.2396699 NA 10.2178140 8.9481108 2.8774891 3.0896507 10.4018825 10.3156306 10.7087193 9.0132721 14.8662174 10.5281693 10.0320470 9.1022587 4.4624581 15.9914174 9.4231712 10.8175384 10.8175384 9.9660744 9.0089462 8.6407952 11.6007234 0.82764000 1.83360000 1.93470000 0.01237600 0.01151100 -0.75866000 0.01642500 0.00722170 0.00722170 -0.01003500 -0.01003500 0.00464390 -0.00152430 -0.00152430 -0.00077822 -0.00077822 -0.00077822 0.00208050 0.00208050 0.01140000 -0.20223000 -0.01670400 -0.03476800 -0.03476800 -0.03476800 -0.04807200 -0.04807200 -0.04807200 -0.03176800 -0.79116000 -0.77380000 0.00000000 0.01237600 -0.79125000 -0.75866000 0.01774200 0.01774200 0.00722170 0.00722170 0.00722170 0.00708260 0.00708260 0.00263570 0.00479940 -0.00401620 -0.00401620 -0.00401620 -0.00152430 -0.00152430 -0.01670400 -0.00077822 0.00208050 -0.75564000 -0.01752900 0.01140000 -0.20223000 -0.01670400 -0.01271300 -0.03476800 -0.03476800 0.00471900 -0.04807200 -0.04807200 -0.03176800 -0.00995650 -0.02931100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.5514091 12.6835786 3.3844505 10.4260131 3.5364633 10.0468930 NA 1.7995018 8.3540818 7.4433489 -1.3703403 7.1492045 0.6295665 10.3103669 9.5160266 NA 6.5243850 9.5228695 10.8517590 8.7562724 9.6877896 8.3693483 11.4105177 2.6295665 10.0495280 10.0915588 4.8774940 0.6295665 10.9520594 3.0890065 12.6285989 11.5422701 6.8535691 11.0725114 9.0673198 8.8132034 6.1373621 1.7995018 -0.3703403 -1.3703403 8.0067782 9.4813169 9.1550887 3.5364633 8.8866492 6.6739620 10.3390825 7.7143760 9.2350473 0.9515132 13.1327725 2.8774891 7.7639944 9.4058282 6.3829854 -1.3703403 8.5137383 7.4142024 0.2144979 NA 13.5250485 -0.3703403 10.7446115 NA 8.5259001 4.6068449 8.0132724 9.0251019 14.296531 3.987121 7.076651 11.457308 10.477224 11.245427 13.766319 12.555771 9.539461 11.258469 13.420425 10.632383 9.331741 8.260745 2.436935 7.606848 11.912946 10.843280 8.284204 8.105301 8.644983 8.902198 9.965650 7.360887 9.569147 11.504741 6.391120 7.606848 9.004607 7.672677 13.237823 9.660235 8.125423 8.765277 12.434102 2.799502 10.036836 10.423171 12.097046 9.845707 11.089768 9.895769 NA 9.225842 7.003651 1.799502 11.099210 6.877495 10.966172 10.427229 7.157045 12.815295 9.505317 10.227155 12.898475 9.967190 10.429254 1.951513 TCGA-D8-A1XJ 76 0 NA 664 breast stage iiia t3 n1a mx 2-10-2014 female 2010 NA NA other specify yes 2 white not hispanic or latino 124.53.0 NA NA 4 3 NA NA 2 2 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.501815e-06 3.893595e-07 13.3271866 3.4016987 6.1489300 11.2683565 NA 8.9412977 0.2723816 9.8086600 11.1881055 6.1611561 8.9153670 6.1912764 8.1762948 9.8788181 6.2836403 8.7998897 9.8658039 10.2649971 6.8460595 2.5203468 8.3085866 10.6536853 13.4987121 11.8527891 10.0985640 10.5586818 2.6647331 11.0414199 -1.7273795 0.2723816 7.6211412 9.6211409 12.7223996 7.1365985 17.7901071 12.6144874 10.0825827 4.4221590 0.8573441 6.9270490 8.1473942 7.0668287 6.4572873 12.9121491 1.4423331 9.9135613 12.3555596 5.0668297 9.4004071 11.2162096 9.3770116 3.7318458 -1.7273795 13.8094309 8.3398473 1.2724413 8.0372845 -1.7273795 4.1793040 10.8274812 10.4846051 9.6679469 9.4010517 10.4653220 9.4183449 NA 10.8205121 10.1135840 6.6902648 7.1053030 4.5761956 9.6349045 15.6056817 7.8012964 9.6754248 11.2641117 6.9448385 3.1793040 3.4818672 7.8384665 9.0660160 11.4560481 1.2724413 6.6431000 7.1334998 10.8627659 11.2787388 5.6732935 5.1303955 4.9306238 9.0011835 11.8807831 -0.7276184 13.6901334 6.2149272 6.2836403 11.3725823 13.1565833 12.8227387 7.7420547 11.2209625 10.5534734 10.2907138 10.9626291 4.6299627 8.2410794 12.7498548 10.6247321 -1.7273795 10.0277176 9.0973714 1.9728397 2.8239327 9.5779046 11.4023397 10.2674732 9.4100445 14.8834664 9.5333323 9.8917157 7.0504897 4.8871207 15.8944431 10.5499908 13.0501818 11.0399766 10.1307824 9.1210356 8.5286213 10.7144283 0.150990 1.895200 0.154570 -0.241560 0.443760 -0.629410 -0.212060 0.482710 0.482710 -0.461420 0.076135 0.662860 0.063223 -0.249580 -0.245940 0.142360 0.142360 0.140580 -0.640380 0.118880 0.099579 -0.253220 -0.583630 3.656900 -0.633010 0.133320 0.133320 0.133320 1.298500 -0.656960 0.150990 -0.232760 -0.241560 -0.304280 0.000000 -0.601190 -0.029584 0.495970 0.482710 0.543650 -0.062495 -0.670580 -0.946710 -0.052936 -0.056307 -0.056307 -0.024935 -0.249580 -0.249580 -0.243750 0.142360 0.140580 -0.637180 -0.637180 0.145930 0.099579 1.787400 0.167750 -0.640290 -0.633010 -0.527670 -0.236920 0.133320 -1.054100 -0.139490 0.149050 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.640 -0.640 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 -0.106 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.640 -0.640 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 -0.106 7.6255598 13.2760185 7.0339636 9.6403735 2.8573839 10.8351322 0.8573441 -0.1425763 8.4373197 7.8096312 2.9728580 7.5250783 3.1303873 10.8720932 9.2244260 0.5943575 5.6387342 10.2857355 10.9151414 9.8375149 8.9795215 7.4696296 10.8001341 1.7318349 9.4074806 9.4183449 0.2723816 NA 10.5135021 2.1792881 13.1498886 11.8442839 6.9693808 10.6870980 8.8498417 9.7405276 4.8871207 2.3598866 -0.7276184 3.3168119 8.4221598 9.4915814 10.9847248 0.8573441 7.7245507 7.4647058 9.8658039 6.4373193 8.6902652 NA 9.9404112 2.8573839 1.7318349 9.8518230 5.7859820 2.4423331 9.0668287 7.8667374 4.9866567 -0.7276184 13.6527724 1.5943575 11.7568581 NA 8.3518977 4.5943395 8.3783213 10.2367537 12.3004172 8.2511231 7.5670335 17.7901071 10.4592977 11.1068838 12.9121491 11.9234645 9.0981824 11.0180535 13.5224521 9.8284398 9.0660160 7.2975528 0.8573441 6.3861557 11.9628473 11.328034 4.698680 9.130394 8.060315 9.288525 10.575320 5.249692 5.432285 11.852789 8.703910 5.105301 8.951013 8.373141 11.091394 10.005004 8.442338 8.180805 10.373075 3.316812 9.667947 9.992229 11.298936 9.836562 10.726455 9.519153 7.534508 9.991930 10.698848 3.226616 11.278739 8.040597 9.849568 9.001184 8.122756 14.015865 9.703388 10.585863 12.212543 10.711205 8.924362 1.972840 TCGA-D8-A1XK 55 0 NA 441 breast stage iib t2 n1a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 124.53.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 2.129984e-05 6.591155e-06 12.1538436 2.5115439 6.4046188 11.5463984 -1.8809759 9.7270091 0.4411647 9.3474340 11.1935253 6.3953405 9.1751768 7.4069286 9.5637138 9.5863125 5.8265765 9.1206246 7.9377987 10.6317101 9.3617953 6.5989964 9.3564264 9.8551955 11.4215699 10.1220315 11.1073687 10.9176883 5.5704265 10.9872674 5.9136314 0.4411647 9.2759317 11.6728458 13.3795848 7.7172693 11.2680108 10.7046486 9.7725096 7.3576215 4.4229999 8.6703096 8.1262440 9.2484995 6.1906781 5.1636114 NA 11.5004891 8.4985947 8.0155489 9.3458454 10.5091167 8.0936309 4.3090379 -0.2958363 15.3585815 8.9568367 3.2891410 7.9473529 1.1192234 4.2484969 10.1738209 11.1032789 9.5611233 8.5179603 9.7778743 9.2790880 -0.2958363 10.6615229 10.3164333 3.3286642 7.2765637 0.1191569 8.3895117 13.7603369 9.5031583 11.0831963 10.0763186 9.1785610 1.5786489 -1.8809759 9.6690012 9.6938101 12.5593720 1.2891262 2.4411382 7.8454349 13.3844287 9.9658822 4.6427767 7.2941419 5.9709664 8.9193076 12.4848555 -1.8809759 13.4928294 4.6583772 6.6661104 11.0412434 12.2234057 12.9508207 6.9988003 10.9187006 11.0005218 11.0208434 10.9989912 5.3576224 8.0792186 12.5495384 6.5072333 NA 10.8640504 10.1680439 1.2891262 3.8290580 8.2251250 11.6303515 9.9341995 9.2172487 14.2969280 11.7648749 9.4866313 6.0850018 -0.8807102 12.7485162 6.7738526 12.7913656 12.0352826 10.4679447 9.1192166 8.1304439 9.5179762 0.2950100 0.2808800 0.5671800 0.3637700 0.7871700 0.3194800 0.3207600 0.3704600 0.3573200 0.3098500 0.3098500 0.3100600 0.9025100 0.0965250 0.1786000 0.2183700 0.1731700 0.3354500 -0.3635200 -0.3645400 -0.3640800 1.2208000 -0.3819000 -0.3666700 -0.3610200 0.0889310 0.0889310 0.2864400 0.3474600 -0.3436600 0.2950100 -0.0073339 -0.3585200 -0.3768500 -0.3612500 -0.3828100 -0.3545500 0.0197830 0.3573200 0.0442900 -0.4063900 -0.3956400 0.2899200 1.0840000 1.1029000 -0.1811800 0.0016642 -0.3700800 -0.6465900 -0.3593100 -0.3601100 -0.3675900 -0.3635200 -0.3635200 -0.3480200 -0.3715500 -0.7475100 -0.1738600 -0.3819000 -0.3514500 0.0784380 0.0889310 -0.3740300 -1.1753000 0.2895600 -0.3727900 0.000 0.000 0.158 0.158 -0.364 -0.364 -0.348 -0.364 0.000 0.000 -0.169 -0.361 -0.361 0.000 0.000 0.000 0.000 0.281 0.000 -0.367 -0.367 0.339 -0.373 0.000 0.000 -0.123 0.235 -0.360 -0.360 -0.364 -0.364 0.286 0.286 -0.340 -0.340 0.310 0.310 0.132 0.000 0.000 0.000 0.000 0.158 0.158 -0.364 -0.364 -0.348 -0.364 0.000 0.000 -0.169 -0.361 -0.361 0.000 0.000 0.000 0.000 0.281 0.000 -0.367 -0.367 0.339 -0.373 0.000 0.000 -0.123 0.235 -0.360 -0.360 -0.364 -0.364 0.286 0.286 -0.340 -0.340 0.310 0.310 0.132 0.000 0.000 7.6852709 12.4053411 4.2066823 9.3766045 0.3671474 12.4476811 0.4411647 -1.8809759 10.3389901 8.2066794 1.8196682 6.6349170 3.4767705 11.3701071 9.6651463 5.7116739 6.5029209 10.6890721 9.7562941 9.6210537 9.1551496 7.5949501 11.2287208 2.5115439 7.5093855 9.2790880 0.1191569 NA 9.4103873 3.0261095 12.5753784 12.4610828 7.8022113 10.3353561 11.0056752 10.1836225 5.1415840 2.6427709 NA 5.7265479 7.9441750 9.6408170 7.0964970 3.9521099 7.8445658 6.7449253 9.9341995 4.5115313 11.1225588 4.0018563 11.5208960 2.9265688 4.1853036 10.0110724 6.3876417 6.3953405 7.8196561 8.2689635 8.0602641 6.0675828 13.4940523 -0.2958363 10.7472063 NA 11.2114782 4.0499531 8.7747472 6.3766047 11.274147 9.456838 7.974085 11.268011 8.974085 11.190176 5.163611 8.083558 9.795976 11.279876 13.758416 11.222668 9.693810 8.240750 1.119223 7.936200 10.668520 10.701123 4.939396 9.472915 8.976420 8.277826 9.689447 6.141584 4.268966 10.122032 11.889261 8.583762 10.124139 9.714884 11.663819 9.908750 4.185304 9.069043 9.748573 6.923348 9.561123 9.740811 12.090311 10.705118 10.622297 8.988810 NA 8.728201 8.116396 8.261323 9.965882 7.961567 11.884065 8.919308 7.809354 14.473328 10.326231 10.499678 13.085001 11.234748 9.616569 1.926569 TCGA-D8-A1XL 34 0 NA 606 breast stage iib t2 n1a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 124.53.0 NA NA 4 4 NA NA 1 3 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.085855e-06 1.946798e-07 12.2556464 4.8013242 5.4793955 11.5360339 NA 9.0626879 NA 8.0626879 11.0543050 11.9407619 9.1658966 7.0973738 8.6526568 9.6229210 6.7188616 9.3394485 9.5914012 9.6381461 6.6040921 6.7315363 10.3380679 10.6297076 13.2852296 10.9241810 9.2231085 10.4232133 8.0168306 10.9082215 2.0099204 1.3094673 7.6313990 9.0916504 13.3481330 6.5478755 13.9121700 12.9493771 9.5727404 7.2810148 3.2636654 4.2163617 8.7430564 10.7985665 5.8093167 12.2205822 -1.6905910 9.6454198 13.8975416 6.5091432 9.4313478 10.7066109 4.3755608 8.1216485 1.1168305 16.0700388 12.9864243 -1.6905910 7.4893800 NA 4.8330317 9.2342836 9.8902009 8.9596253 9.9246409 8.5715661 9.4477430 2.4793858 10.3504458 9.7331123 6.3701678 6.6931761 2.7017930 10.8500836 13.6474763 4.5471105 10.2023934 9.9338097 9.0793090 0.6314303 3.1674543 7.8640598 8.8736207 9.8568477 NA 4.0373910 7.4206070 11.0747573 10.8488723 4.8944346 6.0776553 5.0373910 8.6017927 11.8830000 4.0373910 13.0567725 7.2042884 7.5526453 10.7627418 13.0118603 12.5938615 6.6403881 11.4402026 10.5094502 10.0233818 10.1127951 2.8944298 9.3518145 11.9765827 11.9162234 3.0099025 10.3013472 9.5036123 -0.1056285 1.2949589 8.7534508 11.1272543 9.7518963 9.2795772 15.3138343 10.7686466 8.9065927 7.3538649 6.1296498 17.6967628 5.1921152 11.9034458 12.2464771 10.3664475 9.1063219 7.2752557 10.3754090 -0.0168410 0.7457500 0.5707700 -0.4364800 1.1737000 -0.0419240 0.3662500 0.3971200 -0.4211200 -0.4673800 -0.4673800 1.4507000 -0.0187650 1.1508000 0.6131700 -0.0164290 -0.0164290 -0.0045695 0.5940400 -0.4507200 0.4371100 -0.4370800 -0.4417800 0.4099400 -0.0019399 0.0168570 0.0168570 0.0269350 0.3848400 -0.2750000 -0.0168410 -0.0380340 -0.4364800 -0.0419240 -0.8500300 -0.4262600 -0.4262600 0.3971200 -0.4211200 -0.4211200 -0.0139530 0.4124500 -0.8827100 0.3395000 0.3395000 -0.0018014 0.3341500 0.3807200 0.8619500 0.2942100 -0.0164290 -0.0045695 -0.0180780 -0.0180780 -0.7806600 -0.1785300 -0.4552200 -0.2828700 -0.4417800 0.3464800 -0.6465000 -0.4495400 0.0269350 0.3909800 -0.4202500 -0.5045400 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.437 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.311 0.311 0.000 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.437 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.311 0.311 0.000 8.8033265 12.5376886 8.1119875 9.1666745 3.7017930 11.1248544 3.5948710 NA 9.5591773 8.4310049 1.8944492 6.5809339 0.3095255 10.7895040 9.4451804 4.8944346 6.3483900 9.5954513 8.2967350 11.6422071 8.9643400 6.3262803 10.0488299 2.4793858 6.7647986 9.4477430 7.9056608 NA 10.5161803 3.3094673 13.5167525 12.4378683 7.2607559 9.7044696 11.3434103 10.0382421 2.8944298 1.1168305 NA 7.1232523 9.2709209 9.6703183 10.9756952 1.4793858 7.9017412 8.2387295 10.0941061 5.5948740 10.3518146 NA 9.8906718 -0.6905910 2.9533211 10.0612746 5.7201334 6.3701678 9.1264549 8.6392676 8.9415577 -1.6905910 14.2107859 NA 11.1348275 NA 6.3206977 2.9533211 8.2490504 8.5079163 10.993126 6.949716 8.557399 13.912170 9.777077 11.056825 12.220582 9.094106 8.542276 10.157312 13.353524 12.776121 8.873621 9.110371 3.864057 8.427114 9.431652 11.072891 6.370168 9.083435 9.565680 9.042486 10.203084 7.797311 5.631398 10.924181 8.295313 NA 7.213353 8.471170 9.334611 10.171333 8.099005 9.876001 5.981896 7.516486 8.959625 11.159267 9.558585 8.989831 10.536485 7.016831 3.594871 9.459498 7.412182 8.006439 10.848872 4.768904 11.142361 8.601793 7.044181 14.127479 10.638146 10.523487 12.225631 10.795552 9.527429 3.116830 TCGA-D8-A1XM 57 0 NA 538 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 124.53.0 NA NA 2 4 NA NA 3 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1.056833e-06 3.059253e-07 11.51101763 9.33972309 6.51583228 11.06448269 1.07703786 10.90993103 0.07710624 10.52541549 12.24641803 10.68737385 9.91151213 7.37166166 9.17111874 9.17375608 7.22678787 9.27364316 10.44172291 10.15218583 8.06856280 6.13232390 9.99739389 9.37510353 13.61544218 10.59200164 9.97072182 11.14883855 6.45207976 11.14983182 NA 1.88440255 9.72359969 12.13156058 12.90185065 8.66669234 13.59848812 12.74276556 9.58582617 5.11046347 1.77749336 6.86820399 8.60451802 9.61522997 8.03414307 13.00999392 3.63162817 10.41744749 13.62122066 4.41689377 9.02963674 10.82774798 8.99366700 8.76091285 0.07710624 14.32988347 11.92488041 3.07703786 7.15919018 -1.92303052 3.85839882 10.14816818 9.83900769 9.77748070 11.86443349 8.51583306 9.50906080 1.66202316 11.20873726 10.02941824 5.91624493 8.46721018 1.53645083 10.37453049 14.59272547 8.35197808 11.33545986 12.29930766 7.82187473 5.18556529 3.16449668 9.47203950 9.51323194 11.21755130 NA 5.05431887 7.36705999 10.78849290 11.54069314 5.08826883 7.06572524 5.48643121 10.92174679 11.81079786 1.66202316 13.66326511 5.93502122 7.18032890 12.31208293 13.39229676 13.05485758 8.38196250 10.48537077 11.41563816 10.72840448 11.38623316 5.62393415 7.94740550 12.33059310 11.31887526 -0.33806802 10.43184137 9.33265983 2.39897963 3.03449746 9.66809589 10.17441478 10.34762834 9.23249168 14.88388011 10.46532743 10.05253083 7.21914819 5.26686523 14.73502931 9.22169925 12.75762033 11.85151927 10.27179787 8.91781899 8.74415268 10.47878721 -0.48397000 0.45939000 0.45939000 0.00305220 0.00305220 0.00666530 -0.01578300 0.00444110 -0.49746000 0.00194180 0.00194180 0.00194180 -0.00097017 -0.00097017 -0.00415460 -0.00497200 -0.00497200 -0.49726000 -0.00027724 0.00680440 -0.00166290 -0.00733390 0.44494000 0.44494000 0.44494000 -0.01367700 -0.01367700 -0.01367700 -0.00650500 -0.00774820 -0.48397000 -0.00636680 0.00305220 0.46263000 0.00666530 0.00000000 0.00000000 0.00444110 -0.49746000 -0.01188700 0.00513590 -0.50108000 -0.51300000 0.00763920 -0.00924360 -0.00924360 -0.00924360 -0.00097017 -0.00312270 -0.00415460 -0.00497200 -0.49726000 -0.00027724 -0.00027724 0.00680440 -0.00166290 -0.00733390 -0.01560400 -0.50888000 0.44494000 0.00555290 -0.01367700 -0.01367700 -0.00650500 0.00610900 -0.51197000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 9.7013796 13.7188670 10.8298398 10.1727678 3.8049622 10.6627078 2.8319380 1.5364508 7.6917512 8.7208971 -0.3380680 7.9890169 4.9099315 10.5217971 8.9154570 3.3624418 9.4564193 9.5537873 9.8273294 10.5726462 10.3741838 8.0770411 10.9299606 4.2469629 8.5210205 9.5090608 4.2063228 NA 10.9170321 2.8844026 12.4041024 12.2844367 8.6306705 9.7582795 10.1468264 9.2594354 5.7635417 0.8844026 -0.9230305 3.6917463 8.7635417 8.8722689 8.9334667 6.2267879 8.3754244 5.6843727 9.7972852 6.3716617 9.9992538 -1.9230305 10.4612851 3.3989660 4.4520814 9.5291072 6.2739634 5.6392843 9.0593217 9.1664915 6.9535574 -0.9230305 13.4284634 0.3990070 10.7516747 NA 8.9876838 3.8843928 8.1049473 8.8852010 13.5238210 6.2063248 8.4980538 13.5984881 10.2626598 10.8187187 13.0099939 12.1281650 9.1998691 10.7611322 13.3484311 10.1004489 9.5132319 10.5142729 -0.9230305 7.7370371 12.3479203 11.346314 6.858401 8.564881 8.809208 9.457502 10.584826 7.706398 7.988433 10.592002 6.438985 5.110463 6.900408 7.341109 12.924637 10.797072 8.307061 8.954325 12.644522 7.110465 9.777481 10.221062 11.855221 10.068208 10.605983 9.853063 NA 9.758284 6.998465 6.756522 11.540693 7.864944 9.951638 10.921747 7.864944 13.095546 10.242890 10.292271 13.664086 10.676024 10.116303 2.246955 TCGA-D8-A1XO 56 0 NA 242 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 124.53.0 NA NA 3 2 NA NA 1 4 3 3 1 3 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 10.7138289 6.6925988 7.8438231 10.9006846 0.7422650 10.7782299 -0.8426975 10.3542323 11.1777820 7.0059456 9.5010637 8.3372321 9.4904781 8.4599619 7.6064711 9.7789169 10.0709603 9.9570091 7.9806903 -0.8426975 10.0055545 9.3489990 12.1726507 11.3643371 10.0589439 10.5066040 5.1796902 11.2154837 NA 1.7422650 8.8110635 11.2543673 12.6732074 7.3594465 12.6876682 13.7249819 8.8689898 6.5877760 3.5496445 6.6651170 7.8119590 10.8038815 8.3496156 12.6667886 1.6167341 11.0561131 13.8234636 5.6887035 9.5684948 10.3557679 8.7581649 6.1460075 -1.8426975 13.1618677 10.3042701 2.0642276 8.6126500 -0.8426975 4.4241092 10.3804195 10.3489990 10.5402170 12.9256105 10.9188740 9.4473416 -1.8426975 12.0298053 9.9255071 6.6925988 8.9329331 7.6451627 11.8925615 14.3918222 9.2847045 12.0418750 11.9366318 9.5469541 2.8577621 6.0153035 9.0619573 9.7497798 12.7543278 -0.2577350 6.2762640 7.4004969 9.7162219 11.0754406 4.6808869 6.9775020 4.2866077 10.7233768 11.7878175 -0.8426975 13.7682899 6.0028128 7.6984192 12.0288431 13.4714103 13.0810681 8.3897436 10.1491989 11.2574923 10.8895878 11.4220586 5.6411385 8.1657512 12.0000660 10.5269202 4.2658494 10.1331707 9.4076213 1.8577820 2.4097982 9.6028551 10.8444797 10.8394395 8.5793876 14.1073774 10.1904016 10.1027666 8.6511784 2.2447957 14.6381446 9.8525510 13.1764791 12.8630632 10.4409900 9.5230985 8.6984196 10.7238597 0.00485790 0.58274000 0.59120000 0.01265500 -0.00298010 -0.59448000 0.01740400 0.00763920 -0.61556000 0.00138680 0.00138680 0.00138680 0.02062300 0.02062300 -0.00539920 0.00694350 0.00694350 0.01098200 0.00451790 -0.00664320 -0.59973000 -0.60632000 -0.02548300 -0.02548300 -0.02548300 0.01014600 0.01014600 0.01014600 0.03383100 -0.60197000 0.00485790 -0.00498440 0.01265500 -0.63812000 -0.59448000 -0.00032885 -0.00032885 0.00763920 -0.61556000 -0.63339000 0.01307400 0.01307400 0.00138680 -0.00715980 -0.00715980 -0.00715980 0.00000000 0.02062300 0.02062300 -0.00539920 -0.61767000 0.01098200 0.00451790 -0.60950000 -0.00664320 -0.59973000 -0.59944000 -0.58853000 -0.02548300 -0.02548300 0.01572700 0.01014600 0.01014600 0.01419000 0.01628600 -0.59468000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 9.6177787 13.4474857 4.2866077 10.0376716 3.3013682 10.2254293 1.4792306 -1.8426975 8.1488446 7.9038373 NA 8.3347426 0.7422650 10.2978330 9.2281147 -0.2577350 8.2247571 9.5485665 10.0203475 9.0828771 8.6817764 8.2749661 10.2314643 4.7271799 10.2888582 9.4473416 0.4792306 NA 10.3963246 2.6808869 13.4223518 11.5668464 8.0791637 9.9798936 8.4461888 9.0129700 6.5751747 1.1573025 -1.8426975 -0.8426975 8.4702058 9.1158755 10.2417991 2.7422865 6.6808841 5.1346029 10.3804195 5.6491757 9.3764914 -0.8426975 11.1297642 5.3171955 3.8011794 10.1336828 5.6359720 4.3272490 9.6446604 7.9759047 5.9517393 NA 14.0489879 -0.8426975 9.8843923 -1.8426975 9.6028551 5.2553534 7.9038373 8.7553753 13.0041941 4.9646759 7.9021568 12.6876682 10.5867976 10.7759377 12.6667886 12.0141374 9.6504978 11.5871218 13.0712874 8.9662871 9.7497798 9.4848754 0.1573025 7.8119590 11.6112364 11.143165 7.861227 9.314038 8.419418 8.905516 10.622440 7.598192 7.148845 11.364337 6.790319 5.002815 7.655174 6.452770 10.648675 10.393038 7.999673 7.917211 13.919471 6.212604 10.540217 9.962664 10.600266 9.730970 10.761644 9.058190 NA 8.863033 6.895179 5.414711 11.075441 8.604406 9.971505 10.723377 7.207335 14.419821 9.352695 10.720757 13.042733 10.966287 9.934578 2.064228 TCGA-D8-A1XQ 69 0 NA 499 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.581877e-05 4.891331e-06 12.1778608 0.5171245 7.3322147 11.0607636 -1.8049044 9.9320483 -1.8049044 8.6329756 10.5699914 8.3576149 9.1508734 6.9299330 8.5494732 9.8830367 7.9366903 8.5746019 8.9863865 9.9765833 9.9371119 6.9400575 10.1410332 12.4382488 13.1370507 9.6875776 10.5982357 10.7253861 6.8354681 11.8031307 -1.8049044 1.0025945 8.4276447 10.0919345 13.8056718 7.0025788 11.7309850 11.1792860 9.3961222 6.4944316 3.6546532 8.0516489 9.3595021 12.5682927 6.0960910 8.3576149 -1.8049044 10.8561109 6.2505069 9.1266998 9.3600427 11.5924972 9.0057952 6.0281138 2.3651606 15.9290305 10.2991670 0.1952216 9.2511839 NA 6.6910791 9.9650615 10.6890791 9.8760227 9.1760771 9.9605097 9.9047383 3.8390828 11.1399357 9.6805498 4.3449705 7.1051165 5.5702625 4.7498131 16.1673901 6.7267999 10.5103732 10.1750061 10.7121548 2.1952216 NA 6.7876806 10.4222378 10.0102065 0.1952216 8.3232178 7.6088514 10.9105422 9.8485165 6.8782177 7.0122077 5.9025825 10.7712355 11.8880570 0.1952216 13.9481269 6.0025788 7.9534468 11.4650808 13.6564792 12.8870762 7.4360152 10.9404778 10.9526136 10.6635626 10.4119695 3.1021206 7.7932762 12.4967913 9.7109235 7.4573185 11.2634981 8.6360928 -0.2197739 3.0566876 9.6915781 9.6790395 10.4780225 8.7227006 14.6503582 10.1874539 10.4872576 6.6256767 3.0531982 13.2655123 6.1200367 13.2691978 12.6505508 9.0694366 10.0686677 8.6556795 11.8847139 1.562800 2.936500 0.081322 0.232560 1.267800 0.029888 0.056940 0.763890 0.228230 -0.300750 -0.300750 1.432600 0.046842 -0.193120 -0.527360 0.434460 0.092460 -0.473000 -0.273200 0.525900 -0.261550 -0.525420 -0.173220 -0.173220 1.004900 -0.105000 -0.105000 0.294210 0.175130 -0.493500 -0.262880 -0.236920 0.153670 0.029888 -0.521020 -0.862470 -0.556870 1.512300 0.228230 -0.851700 -0.523280 -0.169420 -0.290000 0.589010 -0.506600 0.075559 -0.147850 -0.531540 0.314180 -0.245690 0.539770 -0.473000 0.000000 -0.126940 0.392470 0.418310 -0.831060 -0.138200 -0.173220 -0.173220 -0.049019 -0.439620 -0.105000 -0.196370 -0.065447 0.089272 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.220 -0.116 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.228 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.220 -0.116 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.228 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 8.5582634 13.4635463 NA 9.0824442 3.8667992 11.8537699 0.7802261 4.4620130 8.9888270 8.5372984 1.0025945 7.9048592 4.4431491 10.7740680 9.2565948 4.7030176 6.1021143 9.6282873 8.9383749 9.9658876 9.3133731 6.5306139 12.4631076 1.3651326 8.2919387 9.9047383 4.1259569 -1.8049044 10.5670002 2.4431557 13.2592085 12.2289908 7.6526048 10.3566705 8.7275795 9.7114161 2.7801841 2.8956710 -1.8049044 3.9231397 8.2958860 10.0229632 8.7507713 -0.2197739 9.1644373 6.5216538 10.5334028 7.0122077 11.2111613 5.3245082 11.2137716 7.0090045 3.0025765 9.6119790 5.2592650 8.7079640 8.9839418 9.6551675 10.0328516 2.5171497 13.2170278 0.7802261 10.8138386 NA 6.8390803 3.6870719 9.2457526 7.9847574 12.892822 6.355096 9.002578 11.730985 10.133701 10.374822 8.357615 9.775482 9.384430 9.833660 14.749483 11.050092 10.422238 7.306359 2.443156 9.910757 11.168562 10.400100 4.839078 8.823669 9.531730 7.878218 10.316071 6.849859 4.976584 9.687578 7.183908 3.002577 5.433627 8.456708 12.670134 10.142495 8.341156 8.036002 7.228647 8.830035 9.876023 10.487258 10.106616 10.505552 9.789548 9.287981 NA 10.044805 6.385048 9.354464 9.848517 6.613076 10.302823 10.771235 7.280032 13.509524 10.012607 11.430789 11.790831 10.663593 9.066359 4.499004 TCGA-D8-A1XR 56 0 NA 482 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 124.53.0 NA NA 3 2 NA NA 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 5.562279e-08 11.0478957 5.3751298 8.4221548 11.2962895 -0.4150375 10.2180478 2.3923999 10.3146734 11.6758267 10.4579840 9.9043485 8.0728925 8.9211873 8.3510293 7.3421645 8.8106619 10.6660922 9.8815866 7.0168985 0.3220435 10.8066398 9.6488972 12.3884439 11.7030204 10.5014298 10.5402182 2.9542894 11.2665839 -0.4150375 3.0000902 8.9418713 12.3916694 12.6854413 6.9159690 12.3914680 12.7377600 10.0546945 6.1190303 3.7549730 5.1599601 7.6475484 11.8358446 5.5392488 13.5729976 2.8074374 11.0293774 13.8469272 6.2432635 10.0918264 10.6889961 7.2265027 6.1750155 -2.0000000 13.2526307 8.4482064 2.5850587 5.9944440 NA 3.6725159 10.1112258 11.6302435 10.6143399 11.7863598 10.3546150 9.5019273 3.0000902 11.8326836 10.2255989 7.5373085 8.7969410 5.8202683 10.6018609 14.4968659 9.3833732 11.7352231 11.6291052 10.3007287 2.4595103 2.3220147 8.3321265 8.8210670 11.2075621 NA 7.1007527 7.3510293 8.6339935 11.1657823 4.4595234 4.7549783 5.2192576 10.3644985 12.1248577 2.1700212 13.5820263 6.8827335 8.2083246 12.4198529 11.6560680 12.9571922 6.6037168 10.5211998 10.2794106 10.4979769 10.8477348 5.5392488 8.3718668 12.9241140 11.0628109 NA 9.9877095 9.3702327 3.2095469 3.6465429 9.9359918 11.1564893 10.6929236 9.3393835 14.8108626 10.6841812 9.8475391 9.5484305 1.8074374 16.3681404 7.7847251 12.2257495 11.2262013 9.8933916 9.1580686 8.5981426 11.1832649 0.71810000 1.23180000 1.23240000 0.07656600 0.06494000 -0.73847000 0.04542400 0.03383100 0.03383100 0.04216600 0.04216600 0.04216600 -0.06072800 -0.05590300 0.01642500 0.01642500 0.01642500 0.01153900 0.01153900 0.05793900 0.02118300 0.01754400 -0.04522800 -0.04522800 -0.04522800 -0.07974200 -0.07974200 -0.07974200 0.09449100 -0.34756000 -0.31800000 -0.31120000 0.07656600 -0.73847000 -0.74224000 0.04267900 0.04267900 0.03383100 0.03383100 0.03383100 1.33920000 0.00000000 0.04216600 0.02539000 0.02539000 0.02539000 -0.00960090 -0.05590300 -0.05590300 0.01321300 0.01642500 0.01153900 0.01153900 0.01153900 -0.73099000 -0.01817800 -0.00092134 -0.75773000 -0.04522800 -0.04522800 0.65351000 -0.07974200 -0.07974200 0.09449100 -0.12330000 -0.16777000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.742 -0.529 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.742 -0.529 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 7.8873108 12.8355978 2.2480186 9.0203758 2.6826632 9.8412613 -1.0000000 NA 8.3454953 7.8138716 NA 6.9773704 1.7005285 9.8888335 9.6448477 3.5236498 7.3642248 9.7863598 12.2632126 10.8353511 9.1742731 8.4073579 10.8210669 2.2480186 9.5765745 9.5019273 1.9069675 NA 10.2665839 2.8580805 13.0425191 11.6551736 7.2645327 10.6328582 7.3620341 8.9278680 3.1293655 0.5850587 -1.0000000 4.9308272 8.6184758 9.1092678 10.7434519 4.1700132 7.7857879 7.4979420 10.4618253 5.8329811 9.5300087 NA 13.0717620 2.1700212 6.8735339 9.8734420 6.3632166 -0.4150375 8.0928475 8.8941499 3.9308319 -0.4150375 13.8508630 -1.0000000 9.9455340 NA 8.1190314 3.9308319 8.1973066 9.1377218 14.150995 4.965877 8.204661 12.391468 10.705943 11.562929 13.572998 13.405365 9.566144 11.176107 13.564329 8.774877 8.821067 9.396695 2.322015 8.335481 11.473669 10.621684 6.262185 8.673399 8.902465 9.512337 10.188651 5.807445 8.620310 11.703020 4.087556 -2.000000 6.686590 6.576462 10.344664 10.028687 8.683769 8.621226 12.864808 2.906987 10.614340 10.274177 11.811565 10.260716 10.849495 9.372411 NA 9.351675 9.089885 2.248019 11.165782 6.546984 10.411972 10.364498 7.312973 13.414742 10.101738 10.464636 13.168684 9.997623 9.937832 1.169989 TCGA-D8-A1XS 48 0 NA 496 breast stage iiic t2 n3a m0 2-10-2014 male 2010 NA NA other specify no 25 white not hispanic or latino 124.53.0 NA NA 1 2 NA NA 1 1 3 4 1 3 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 2.224912e-07 11.0961274 5.1795747 7.9223448 11.1063001 -0.1896803 11.1960225 1.2253983 10.3488522 11.4962567 10.2574231 9.7814043 7.2421861 8.3865092 8.5188490 7.6579193 9.0407607 9.2040879 9.8809082 7.6765883 1.6848187 10.6825017 9.3404210 13.2571216 11.5693958 9.0574763 10.5176990 5.3443172 11.0507317 NA 3.2253829 8.6305187 11.0893700 12.8803490 7.5015020 13.6300533 13.3466276 9.1918829 5.1561134 3.3546637 6.0957430 8.9413393 10.6615684 7.7818836 13.2121971 1.2253983 9.3725824 13.1655533 1.5473018 8.7242266 11.7559056 6.8620025 3.8103403 -0.7747251 13.3428508 8.9575449 3.3546637 7.5130896 NA 4.1322643 9.3630090 11.1773906 9.6605267 11.7911935 10.3191251 9.2738644 -0.1896803 11.6326452 9.6047558 5.1080184 7.5107800 0.2253983 11.3916974 14.6423233 7.9996376 11.1909813 12.5935428 9.5188490 1.9258096 1.2253983 8.3927957 9.5102014 11.0325310 -0.1896803 7.1322684 6.4250497 10.6305189 11.1286944 5.7645372 6.5741061 5.1678918 10.8771018 12.0270857 2.1322807 13.7366976 5.1561134 7.6765883 13.0221775 13.4273098 12.8245929 7.6133946 10.0201994 11.3425334 10.9731969 10.8535950 4.9935612 7.9549983 12.6606570 11.6764597 -1.7744783 10.1397625 9.5107796 -0.7747251 3.0429945 9.9188643 10.0724348 10.2948271 9.6521663 14.9922556 10.4351354 11.4701872 8.6868570 4.0833581 16.0184980 7.9685286 12.2350311 11.7065461 9.6521663 8.9609333 8.5607677 10.3835863 -0.2993300 0.9863800 0.9915500 0.0535210 0.0535210 0.0332670 0.1013300 -0.0150730 0.0000000 -0.5041100 0.0019418 2.0957000 -0.0151910 -0.0151910 -0.1633200 2.6796000 0.3177100 0.0239870 0.0239870 -0.0596730 0.0482620 -0.1148200 0.9836900 0.9836900 0.9836900 -0.0053992 -0.0053992 -0.0135000 2.1936000 -0.2993300 -0.2993300 -0.0519910 0.0535210 0.0332670 -0.7097100 0.1013300 0.1013300 -0.0150730 0.0000000 0.0000000 -0.0156040 -0.0156040 -0.5150600 -0.1162600 -0.1162600 -0.1162600 -0.1162600 -0.0151910 -0.0151910 -0.1633200 -0.6653100 0.0239870 0.0239870 0.0239870 -0.0596730 0.0482620 -0.1148200 -0.6328200 -0.7111400 0.9836900 0.0536640 -0.0053992 -0.0135000 0.7539500 0.0376410 -0.0431920 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 8.6209115 13.3120941 7.2914663 9.5205723 4.3628836 9.4145842 -1.7744783 NA 8.3378168 7.6889021 NA 7.6497326 1.5473018 10.3855639 9.3934226 2.9802630 7.2477453 10.0665486 8.8960335 11.4829126 9.2339460 7.9968666 10.7287062 2.7489335 9.8327078 9.2738644 5.5382588 -0.7747251 11.0704753 2.4732934 11.9201705 11.7258459 8.0708675 10.5509639 8.0880149 9.3946760 4.9935612 1.5473018 0.2253983 7.4827652 8.4827652 8.4827652 10.2428817 3.2253829 5.9938260 5.9802653 11.6380795 6.3494980 10.5388273 NA 9.7577333 1.0327356 3.8978019 9.8126346 5.8638121 4.8547338 8.5084659 8.4980071 6.0519267 -1.7744783 13.4274247 1.0327356 9.9943887 -1.7744783 7.5015020 4.1795747 7.9685286 8.3482054 14.837431 6.286073 9.333248 13.630053 10.070138 11.014096 13.212197 12.608542 9.513667 11.033537 13.455923 11.243578 9.510201 9.066942 -1.774478 8.383987 12.964261 10.7560276 6.8327078 8.8056359 9.1531553 10.4556981 10.1058180 6.7212318 6.9935612 11.5693958 4.6683234 0.5473511 5.6848103 7.7155667 12.1234118 10.0258729 9.9524470 8.2253776 11.8919343 6.3234097 9.6605267 10.1015106 12.1517661 9.0157259 10.4018622 8.5461779 NA 8.5691516 7.2670366 5.9188632 11.1286944 8.4577982 10.1933240 10.8771018 7.2642962 13.5488896 9.9588164 9.8262196 13.2525491 10.0363506 10.0712594 2.3128394 TCGA-D8-A1XT 61 0 NA 193 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 124.53.0 NA NA 1 1 NA NA 2 6 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.621532e-07 2.503025e-07 12.52154008 3.16917140 6.73276033 10.17776547 -1.91811503 10.53497981 NA 9.50640042 11.19691547 8.44474864 10.24252605 8.03590538 10.42822291 10.15250098 5.31052917 9.85113389 8.35550483 10.53497981 8.35550483 2.54114309 10.31742426 10.42711439 13.66734662 9.99385010 9.87083521 11.08434841 5.11513315 10.89849286 NA 0.40359495 9.63485841 12.29200001 12.82148980 8.53292042 17.06079939 12.28925740 10.48365528 4.92719958 1.88904515 6.31052735 8.71197630 7.97652689 7.37403093 12.53317789 -1.91811503 12.07039386 11.73253658 8.07039362 9.02014935 10.75302909 8.96740554 7.48258856 2.25162821 15.35042150 11.02000235 1.88904515 7.46108731 -0.91838768 4.86307119 10.27461845 10.41262605 9.77650229 10.08417259 9.79337620 9.81302823 1.25162821 11.61929163 10.18039927 3.83660081 8.39004812 0.08174865 6.24661520 14.99560368 8.25194722 11.25147762 10.98972643 8.80877888 -0.33333429 2.25162821 7.03881147 10.24881362 9.99609437 1.08168049 6.70009426 7.39232172 9.73679257 11.72849287 6.76470443 6.49956210 6.25163389 11.09869154 11.56653207 2.60528097 13.41818088 5.40363585 6.38091642 11.89969210 13.86731490 13.07429354 8.67136025 11.33467022 11.47402662 11.14841061 10.87185404 4.63629980 7.67042398 12.82032927 9.08803530 NA 10.79552524 9.12473652 1.88904515 3.17426259 9.32726183 11.10234194 10.26844246 9.46000407 15.25544487 10.78928405 9.91420363 7.88584033 3.16917140 12.86848931 4.58950584 13.62477122 11.23652730 10.41988846 9.18827209 8.50797378 10.68459356 1.19340000 0.04684200 0.27395000 -0.51969000 0.48131000 0.00013863 -0.02849100 0.51228000 -0.52677000 2.25980000 1.79820000 -0.00816240 1.12030000 0.00986690 0.00763920 0.02034300 0.02034300 -0.51280000 -0.00733390 0.00416320 0.01112100 -0.04102400 -0.49350000 3.65690000 0.52731000 -0.46621000 -0.46621000 -0.46568000 0.01768400 -0.48544000 1.17160000 0.02174400 -0.51681000 -0.51506000 0.00013863 -0.51897000 -0.51897000 0.01209700 -0.52677000 -0.53154000 0.04329900 0.01405100 -0.53685000 0.11169000 -0.90662000 -0.00567570 0.02286500 0.00986690 0.01419000 0.02918400 0.01251600 -0.52213000 0.01474900 0.01474900 0.00000000 -0.51032000 -0.03204100 0.09173500 -0.49350000 -0.46014000 0.05736800 -0.43897000 -0.45040000 0.00083195 -0.50950000 -0.51764000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 8.2390562 14.5843701 6.3578335 9.8265431 3.1691714 11.0988656 1.7821569 3.6964168 8.8282235 8.7354501 -0.3333343 8.6036823 6.5287916 11.1087512 8.9050765 2.7255667 7.7092431 10.1175392 10.7625082 9.4750997 9.0701880 7.1665176 12.1757869 2.9885938 5.7327603 9.8130282 1.5411183 NA 11.1845051 3.4036358 12.3876284 12.0042936 8.1744663 9.3578337 13.3281158 8.4632522 3.8890646 3.6666771 -1.9181150 1.9885938 7.5655248 9.4210025 8.7629477 3.7821464 9.5924339 7.5329200 9.9026859 6.4260047 10.6028188 0.6666657 9.8486522 4.2314554 4.1902356 10.1517798 6.0775336 3.1691714 9.2844452 8.7470449 3.8890646 2.4036495 13.3593598 0.4035950 10.5675385 NA 9.8642979 3.9886029 8.0589891 8.9153900 12.953274 6.761190 8.875313 17.060799 10.394360 10.828224 12.533178 9.387201 8.917254 10.646097 13.613761 8.659138 10.248814 8.802808 2.251628 8.080300 12.355213 11.65890195 6.81641923 10.52905080 9.52930912 8.70376103 10.42545563 6.61309106 7.31772373 9.99385010 6.77867643 -0.33333429 7.78734169 9.07381193 14.49508920 10.73679266 6.68533610 9.21485141 9.52153998 4.98859835 9.77650229 9.98068841 10.77170718 10.30420220 10.61601210 9.60527115 -1.91811503 10.15217226 7.63568402 4.01244353 11.72849287 8.98182127 10.79100843 11.09869154 7.93969028 13.94676579 9.79466604 10.39175387 12.10234194 10.64108626 9.87042745 0.08174865 TCGA-D8-A1XU 56 0 NA 395 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 4 3 NA NA 1 1 3 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 2.224912e-07 12.0651408 6.1160486 6.8660709 11.4953922 0.7821569 9.8068269 -1.8028895 10.5389832 11.4098348 9.5264222 10.2836544 7.4042006 9.2415804 9.0045413 6.9386539 9.8035916 10.5389832 9.8876209 7.2605818 1.0045373 10.0065526 9.2112069 14.8262441 10.6063121 8.7877733 10.9514476 4.4260030 10.7957042 1.0045373 2.3671194 8.3303285 12.4752002 12.5743969 9.0912463 12.0235363 12.9127195 9.2612555 5.2846511 1.1971734 7.0950320 8.2056149 9.8836869 8.3708635 12.8996838 3.4825902 9.2673073 13.3018671 4.9653687 8.8642979 11.0181631 8.8274535 9.4474848 0.7821569 14.1467895 11.8084937 4.1744623 7.4042006 -1.8028895 4.8410422 10.5536384 10.6675911 9.9302017 11.0578854 10.5398167 9.3739829 1.7821569 11.2637802 10.2763378 6.6359778 9.5364798 1.7821569 11.4749097 14.5295902 8.4369880 11.0851686 11.1310615 8.5459147 2.0045373 3.6566222 9.0363901 9.3539015 11.1864035 NA 6.2578819 7.3696139 9.7512955 11.0249260 7.6129282 6.4211879 4.3671124 10.2028110 11.6692426 3.8118923 13.3179103 5.2415809 7.6065777 12.2069276 13.4717102 13.2092871 8.2511122 9.2477154 10.5453613 10.0974495 10.7677537 5.6729203 8.8035916 11.6769667 10.2882912 0.1972364 10.3761624 9.4963944 1.5191393 3.1040850 9.8183225 10.5309008 9.7741431 9.4498519 15.1251842 9.3309709 10.0387507 9.4843216 2.5191141 15.3026141 8.8749061 12.4976820 11.6394820 10.2126014 8.9140059 8.8063650 10.2778474 -0.33929 0.37611 0.31617 -0.33987 0.38386 -0.33929 0.39164 -0.35943 -0.34469 -0.35019 -0.35019 0.39065 1.03310 -0.33653 -0.34710 -0.34710 0.29406 0.36575 0.36575 -0.34354 0.37874 -0.34504 -0.34584 -0.34584 -0.34584 0.35675 0.35675 0.36094 1.05060 -0.33537 -0.33929 0.34762 -0.33987 -0.33768 -0.33929 0.39164 0.39164 -0.35943 -0.34469 -0.35053 0.41011 -0.29084 -0.35019 -0.34320 -0.34320 0.38039 0.37051 -0.33653 -0.34010 -0.34710 -0.34515 0.36575 0.36575 0.36575 -0.34159 -0.34228 -0.34125 0.37325 -0.34584 -0.34584 -0.33894 0.35724 0.36094 0.37726 0.38998 -0.34079 0.685 -0.337 -0.347 -0.347 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 -0.023 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 0.685 -0.337 -0.347 -0.347 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 -0.023 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 8.7727256 13.3215501 4.7363451 10.5684186 4.0551696 10.2007043 0.1972364 -0.2179270 7.6044539 7.8210679 -1.8028895 7.3594017 4.8265434 10.9127195 9.4773772 0.5191393 8.1160497 9.4349939 9.9895701 8.7670420 9.1956217 8.7708337 10.5724974 3.5547362 5.5281024 9.3739829 1.3670914 -1.8028895 9.8651850 4.0551696 11.9745445 12.4717102 8.3096260 9.6208276 8.3532695 9.4492605 7.3341776 1.0045373 -0.8028895 0.7821569 8.5224917 9.3011299 10.0121693 3.4825902 9.0190958 6.3264690 9.5453613 6.6192516 8.7059717 NA 11.6593052 2.7207381 6.1629713 9.4284196 6.0220815 3.7821464 9.4900831 8.3251809 6.8228958 0.1972364 13.9229521 1.1971734 11.0763867 NA 8.0767696 5.6483964 8.0157685 9.3296860 12.640172 5.744080 8.192954 12.023536 10.241581 11.010767 12.899684 12.117446 8.434396 11.151019 12.611740 8.237476 9.353902 8.508935 -1.802889 7.271328 11.142264 11.230265 7.082882 8.863410 8.468649 7.625547 10.486070 7.208414 7.848238 10.606312 8.142630 6.855398 3.897628 7.754248 11.295876 10.600731 8.041108 8.055167 12.794075 5.883687 9.930202 11.258051 11.704981 9.368989 10.933588 9.005346 NA 9.254731 9.152851 5.151384 11.024926 8.026909 11.012157 10.202811 7.113066 13.322035 10.535644 10.473602 12.499540 9.802203 10.062920 1.897628 TCGA-D8-A1XV 84 0 NA 461 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA mucinous carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 2 2 NA NA 1 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.668684e-07 11.8713364 2.6281670 7.7913928 10.0140248 -0.9567955 10.7570160 1.6281670 10.1220178 11.4702508 9.0916869 10.3210684 7.9500904 8.4525909 8.3239708 8.1092890 8.8965095 10.0903238 10.0340129 7.3919284 -0.9567955 10.3611777 8.3560831 13.4355844 11.3665362 10.0848590 10.9189492 1.8505594 10.7989220 NA 1.3651326 6.2526541 11.4533862 13.4402728 8.6187390 11.1339739 13.0698962 9.7419046 7.3696296 4.6870551 3.3651326 8.2030714 9.6121060 4.8505544 13.9945757 3.7980920 10.9281336 13.2051978 6.2623693 9.5657815 10.5082560 7.7331977 8.5784753 NA 13.8166843 7.4525905 0.6281670 7.4944108 NA 3.9011855 9.6365911 10.4923485 10.4871794 10.2845872 10.3718749 8.9135647 3.1306673 11.3949673 9.2970474 6.0204800 8.3099865 14.2096768 12.0474204 13.9003547 8.9577045 11.7808697 11.6083020 7.4095225 2.5026361 5.2131256 9.1865830 8.9605719 9.6523786 -0.9567955 5.0655680 6.7642997 9.8005898 10.9754147 5.8633785 3.5667665 3.2131295 11.0269061 12.2134379 -0.9567955 13.4900893 7.4652644 8.1827514 11.1072689 10.2379567 12.8328354 7.6542250 10.6258123 10.8497495 10.9277520 10.9489630 4.9011807 7.9470817 11.8607832 11.4198679 NA 9.7871928 8.8665671 2.7436442 2.8526181 10.3383949 10.6393896 10.6407869 9.0431998 14.8144572 10.3082288 9.6300397 9.5608693 1.0432045 16.7657806 7.6168473 10.9304205 10.5005808 9.8972890 8.5765297 8.3628718 10.6485960 -2.0938e-01 8.0434e-01 8.0434e-01 1.2987e-01 1.2987e-01 -1.0284e-02 9.6758e-03 -9.7319e-03 -9.7319e-03 7.8038e-04 7.8038e-04 7.8038e-04 -2.0702e-01 -2.0702e-01 6.4170e-04 6.4170e-04 6.4170e-04 -9.5939e-03 -9.5939e-03 2.1411e-02 -1.4270e-03 1.6116e-03 3.1394e-03 3.1394e-03 3.1394e-03 -1.8529e-03 -1.8529e-03 -1.8529e-03 5.6402e-03 -2.0938e-01 -2.0938e-01 -2.0353e-01 1.2987e-01 -1.0284e-02 -1.0284e-02 0.0000e+00 0.0000e+00 -9.7319e-03 -9.7319e-03 -9.7319e-03 1.6127e-03 1.6127e-03 7.8038e-04 8.7085e-05 8.7085e-05 8.7085e-05 8.7085e-05 -2.0702e-01 -2.0702e-01 6.4170e-04 6.4170e-04 -9.5939e-03 -9.5939e-03 -9.5939e-03 -2.2683e-03 -1.4270e-03 3.1394e-03 1.0791e-02 3.1394e-03 3.1394e-03 2.8617e-03 -1.8529e-03 -1.8529e-03 5.6402e-03 -3.2374e-03 -8.6435e-02 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.8505544 10.6973884 4.8245591 9.0944090 2.6281670 9.4882147 0.0432045 NA 8.4778283 5.7014104 NA 5.6281612 -0.9567955 10.2593395 9.2899405 -0.9567955 5.3286031 9.2143767 11.0526786 9.3526762 10.5777070 7.8855500 9.9620631 2.3651326 9.9657843 8.9135647 2.0432045 NA 10.1186790 3.2131295 13.2165647 12.5564340 6.4778279 11.4710365 6.9440666 8.8697484 5.0204800 1.3651326 0.0432045 2.9500951 8.6942517 10.6305086 9.5460317 0.0432045 8.4774110 5.3099874 10.4799114 8.1621410 9.3366715 NA 13.0458391 0.6281670 10.1595438 9.5939658 5.4218864 2.2131295 7.4269038 7.3052948 4.6870551 NA 14.0831899 -0.9567955 10.7054232 NA 9.7557268 4.1306591 8.1647335 9.2440986 13.9544069 3.7980920 9.2428723 11.1339739 10.9504662 11.7076472 13.9945757 12.1507439 9.3239705 10.8335484 13.2279203 10.9308013 8.9605719 7.5189332 -0.9567955 7.4652644 11.2842892 10.1821116 8.2330243 8.8392394 8.5842966 9.1776261 9.4419115 5.0655680 8.5189332 11.3665362 6.6725569 NA 8.1385969 6.8190410 8.9073861 9.1980179 8.9959412 8.5108053 12.1295020 3.6281670 10.4871794 10.4122518 11.2508243 8.1385969 10.7462383 9.2453238 -0.9567955 9.3374990 9.6936952 2.3651326 10.9754147 5.8505544 10.7658153 11.0269061 6.9915672 14.0137552 10.3424078 10.6149525 13.1255984 8.8681586 10.1359570 2.0432045 TCGA-D8-A1XW 53 0 NA 385 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.220179e-06 6.244252e-07 11.9014122 4.2218152 8.2261752 11.6126116 -1.7321646 11.0528703 0.8525582 10.3404247 10.7884865 6.1193707 9.3249370 7.9852989 8.2434701 11.1739492 6.1193707 8.8795692 8.7219215 10.4186388 9.7684641 1.4375474 9.8351030 11.0111945 13.7513436 10.1775153 10.1624400 10.5619558 5.5155485 10.9389421 1.4375474 2.1745023 9.4362943 13.8930457 12.9751432 6.9294005 11.9897894 12.1734793 9.1578865 6.2563068 3.0225099 6.3603801 9.8154808 8.9195710 5.6339455 5.9042480 NA 11.1279333 10.5155497 8.3787578 9.3256884 10.6515965 8.8009520 7.1349006 -0.7324043 15.0699201 10.1570121 1.2675957 9.3754932 -0.7324043 6.0023312 10.0411736 10.0858049 9.5483931 10.6196656 9.8591446 10.2431120 7.1835014 12.1515065 10.1016983 5.6938883 8.3956164 1.5895718 4.5155485 15.9487440 7.7174722 11.2272620 10.9108020 9.8293875 0.5895718 1.0749849 7.8145165 10.0977413 11.4671412 0.5895718 6.2955284 6.7474022 10.0304195 10.9878665 4.4574498 8.0717530 5.2101356 11.6463235 11.0216746 -0.7324043 13.5519765 5.2449023 7.5460718 12.1695262 13.0669545 12.7257725 7.0749774 13.6240398 11.4585272 11.3636900 11.0761843 5.6938883 7.1864857 12.1858333 10.4456645 1.5895718 10.4940344 9.0031783 4.1745103 5.2736949 10.3705821 10.5530244 11.1005123 9.2739483 14.7602735 9.6812502 10.2488327 7.5297171 2.4375474 13.2882984 10.1028831 12.7417718 12.4867908 9.5541800 9.5616685 9.1091866 10.1103262 1.034000 1.034000 0.904520 -0.029721 0.580950 0.099433 0.785240 -0.070536 -0.028355 0.075847 0.075847 1.691500 1.271400 -0.069716 -0.638500 0.555490 0.555490 -0.033677 -0.033677 1.256200 -0.044280 -0.578320 -0.081083 -0.081083 -0.080408 -0.069332 0.368210 0.368210 0.435130 -0.092569 1.034000 0.000000 -0.029721 -0.631590 0.054255 -0.174320 -0.174320 -0.070536 -0.028355 -0.028355 -0.111550 0.605210 0.075847 0.718160 0.655350 -0.027261 -0.053881 -0.069716 -0.099486 -0.638500 1.110800 -0.033677 -0.033677 -0.033677 -0.027535 -0.635950 -0.068127 0.379070 -0.081083 -0.081083 -0.064106 -0.069332 0.368210 0.463140 0.670850 1.329300 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 8.8365285 13.2790242 2.5895478 9.6063586 3.0749849 12.9333468 0.2675957 6.3709105 7.6404872 10.0648784 6.8145171 8.8597429 5.9611093 9.9042468 9.0693305 NA 7.1256036 11.1905783 9.7234632 8.4537365 8.2472473 8.2334064 12.7959543 4.9680631 9.2005752 10.2431120 4.2676257 -0.1473619 10.1433716 1.4375474 13.1849943 12.0208390 8.9294005 10.5642517 9.8818720 8.8009520 -0.7324043 4.1745103 0.5895718 2.0749849 7.8028976 8.8997086 9.8043552 4.4574498 9.4926850 6.2218191 9.8511751 7.9222585 10.4709703 8.5861650 12.7658482 2.7270491 5.4770750 9.5564825 5.6133372 5.8450509 9.2254499 9.3623599 6.7022503 6.6163503 13.3112904 1.2675957 10.8504699 NA 6.9576198 6.7188329 9.1931767 9.0949649 11.136636 5.668502 8.617456 11.989789 10.641847 10.823889 5.904248 9.866140 9.422599 11.117418 13.092979 10.440050 10.097741 8.208670 NA 7.971526 11.817166 10.223998 6.204260 9.415463 7.587294 8.336400 9.536848 7.920467 5.496440 10.177515 6.042410 1.437547 5.457447 7.277171 13.194706 10.272194 7.856337 7.370910 10.909448 8.303796 9.548393 10.634491 11.816444 10.979719 10.476771 10.165468 NA 10.413704 7.691116 6.806782 10.987866 6.510796 10.559955 11.646324 7.793143 14.324175 10.194289 11.640351 12.168112 9.216719 9.851175 3.022510 TCGA-D8-A1XY 74 0 NA 503 breast stage iia t2 n0 mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 1 2 NA NA 1 2 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.952849e-07 2.781139e-07 11.80693131 6.88640382 8.20186955 10.94658649 -1.59727782 10.96387592 1.72451931 10.24454544 11.06124582 8.51763160 9.16663034 7.68103737 7.99504520 9.13983526 9.08206812 8.22116996 9.12112085 9.73126302 7.72000068 3.65051184 10.24415235 10.08645990 13.31421407 10.18435754 9.58436144 10.56434978 3.49005662 10.53217697 0.40261304 1.72451931 8.45787045 11.95165066 12.66578385 7.37125478 13.08107812 13.40553485 9.68219860 6.73797873 3.49005662 5.94174721 8.29740559 7.64576217 8.25277469 12.91087800 2.92615127 9.39340118 13.11484631 2.10302758 9.19537836 10.84786157 7.47405066 7.53701412 -0.01246084 13.67849898 8.90641383 1.40261304 6.69260713 NA 4.33332354 10.17077234 11.14973201 9.89894249 11.53203204 10.08338705 9.76068968 -0.59749610 11.66791004 9.51241871 6.06079967 7.74243812 -1.59727782 11.07457126 14.82994997 8.20110844 11.34839759 11.73112268 8.64337930 1.86203474 NA 8.10129289 9.63500902 11.76904683 -1.59727782 6.27910538 7.63140700 9.76014009 11.28504000 6.09607417 5.82043939 5.11683465 9.64278315 11.55439737 3.26056769 13.52949410 7.02097327 8.09258591 11.57610903 13.44000628 13.01292082 8.06792369 10.99294117 10.86304392 10.54381706 10.47539055 5.01729839 7.67171443 12.06024140 10.17902106 0.98753916 10.43910510 9.63500902 1.98753916 2.40348588 9.48273940 9.97291806 9.24807818 9.31996018 15.10064150 10.68219860 10.52120467 8.44150713 3.10302758 15.63350910 9.00528685 12.51486460 11.61204138 9.36837223 9.05004643 8.30797490 10.45660545 -0.435610 0.439570 0.596380 -0.111550 0.522930 -0.096383 0.197560 0.171060 0.191320 0.476900 0.476900 0.492510 0.065799 0.065799 0.173470 0.173470 0.173470 -0.464980 0.251990 -0.793520 -0.105130 -0.126420 0.632620 0.632620 0.632620 -0.152600 -0.144640 -0.146200 0.472210 -0.457910 -0.435610 -0.116390 -0.111550 -0.103420 -0.091684 0.203960 0.203960 0.171060 -0.454690 0.174230 0.226690 0.199440 0.476900 -0.118610 -0.118610 -0.118610 -0.134320 0.065799 0.065799 0.173470 0.173470 -0.437780 0.198780 0.169560 -0.731170 -0.113840 -0.122800 -0.464430 -0.466740 0.632620 -0.104210 -0.152600 -0.146200 0.472210 -0.110770 0.051672 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.105 -0.105 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.105 -0.105 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 8.03558322 13.62020499 7.50325013 9.44424714 1.00669298 10.15245750 -0.59749610 -0.59749610 8.05901289 8.30947863 -1.59727782 7.56351815 1.72451931 10.07235894 9.29816340 -0.59749610 8.89644352 9.91878052 7.51893164 10.59857531 9.05244606 8.09781619 10.77626885 2.92615127 10.06614612 9.76068968 5.33332712 NA 11.02738348 2.10302758 12.75090123 11.53845761 8.18722289 10.16745954 10.69001186 8.74577381 3.95718100 -0.01246084 -0.01246084 -0.59749610 7.93396973 9.30646983 11.54756483 4.46867454 5.58706790 6.63620698 9.98143242 7.72676856 10.03694532 NA 10.36295199 2.86201490 4.49005020 9.94297759 6.37963829 0.40261304 9.21396277 8.72789357 6.51633039 0.98753916 13.12587565 -1.59727782 10.28675850 -0.59749610 6.11683258 4.42495567 8.19375105 7.78196617 12.702998 4.017298 9.154969 13.081078 9.301990 11.017528 12.910878 11.258819 9.509805 10.539899 13.053191 9.775997 9.635009 9.204296 NA 7.847603 11.394110 11.049147 7.359690 8.718869 9.095203 8.801332 9.964830 6.157476 4.130511 10.184358 6.495345 9.642187 3.926151 6.296496 11.218572 10.372694 8.794905 8.649329 12.571730 4.017298 9.898942 10.410316 11.739792 9.973867 10.364399 9.652294 NA 8.823622 8.721899 3.862015 11.285040 9.059013 9.777394 9.642783 7.031944 12.458887 9.608381 10.503579 13.484654 9.867644 9.256677 2.209952 TCGA-D8-A1XZ 81 0 NA 466 breast stage iiia t1c n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 124.53.0 NA NA 4 3 NA NA 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.352921e-06 4.162835e-07 12.9743032 2.3352260 8.3389659 10.2835811 NA 10.0103867 -1.8349564 9.4042905 10.4364599 8.1497075 9.9168328 7.8846779 8.5543824 9.4332460 4.6247209 9.1180300 10.0131292 10.4784553 7.2868220 2.8657209 9.7299147 10.1482823 14.2011618 11.1011904 9.6025207 11.2318825 6.0418059 9.9830718 NA 0.7502635 8.2829318 9.9786691 12.7933925 7.5767995 11.5866962 12.9742530 8.8315128 4.1425686 1.1653010 7.8217134 8.9033812 9.4696402 7.5468320 12.7015360 0.9726191 9.3753512 13.6786771 0.4871776 8.9160628 11.3620446 5.8726490 6.4036938 -0.8346990 13.9715781 9.0699234 2.6888517 7.8447692 -0.8346990 4.7044460 10.3771771 10.1292686 9.4662133 10.0302487 10.4990032 9.7054167 0.4871776 9.7790783 10.0185983 3.6571369 6.5873530 5.3048396 10.7457829 15.2330487 8.5311299 11.0486958 10.6012194 8.9965961 3.0232731 NA 7.4226770 8.9334732 9.6071955 NA 6.1194848 7.4367515 10.8500374 10.6280467 5.8795342 6.7946459 4.7652006 10.3600456 12.0943622 1.7502635 13.4803322 6.0901018 7.9997599 10.4291448 12.1148420 12.9137437 7.1709135 10.4739122 10.9107530 10.7159899 10.2147970 4.7044460 8.6720922 11.4603402 11.3008377 -0.8346990 10.6415287 10.2550702 0.1653010 2.7502420 10.0287008 8.7577457 10.1511307 9.3575817 15.4306841 9.7398824 10.6056389 7.3796080 5.3551150 15.4367518 6.3501648 11.8856399 10.7925947 9.8880963 8.8482834 8.2219264 8.9641008 -0.045545 -0.404330 -0.414470 -0.194960 -0.194670 0.266810 0.185960 0.305640 0.271850 0.320550 -0.627160 3.656900 0.120300 -0.340710 -0.112120 -0.112120 -0.112120 0.195490 0.211410 -0.344620 0.606230 -0.516950 2.982500 -0.487260 -0.509940 0.396060 -0.636260 0.295590 0.625450 -0.858000 -0.045545 0.087052 -0.194960 0.266810 0.265240 -0.631240 0.186260 0.305640 0.271850 0.271850 0.263360 1.438700 -0.649360 -0.022378 -0.022378 -0.022378 -0.022378 -0.340710 -0.360260 -0.329050 -0.042698 0.195490 0.211410 0.220600 0.105650 -0.605290 -0.390890 0.475410 -0.518910 -0.487260 -0.029220 -0.570350 -0.153920 -0.159410 -0.185510 0.338960 0.120 0.120 -0.112 -0.112 0.195 0.195 0.000 0.661 -0.517 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 -0.404 -0.404 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.443 -0.629 0.272 0.272 0.622 0.622 0.906 1.543 0.000 0.000 0.196 0.120 0.120 -0.112 -0.112 0.195 0.195 0.000 0.661 -0.517 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 -0.404 -0.404 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.443 -0.629 0.272 0.272 0.622 0.622 0.906 1.543 0.000 0.000 0.196 8.8181338 13.0034586 9.6814812 9.4866532 0.1688987 10.4477981 0.1653010 NA 8.1553925 8.1151155 3.1652849 9.5862281 0.4871776 11.0150848 9.7864248 2.5576061 6.8306242 8.8898027 6.2527525 9.3389659 9.2210592 7.4576107 10.3451979 1.8657209 9.0669099 9.7054167 1.1653010 NA 11.9068611 1.7502635 13.0150359 12.5187803 7.1136557 10.3254754 9.3131297 9.1482823 2.9726375 -0.2498223 NA -0.8346990 9.7577458 9.4161794 10.4934027 6.5184360 8.0219166 6.6927661 10.3597378 6.9854674 9.2725059 NA 11.2200627 2.4132149 4.3150372 9.8211191 4.6060750 7.2124127 9.4161794 8.4155871 8.9367784 -1.8349564 13.8654846 1.3351974 11.2765875 NA 8.8377140 4.2313786 8.9726438 9.2192148 12.741003 3.920179 9.565634 11.586696 10.235074 10.256724 12.701536 9.989850 9.318207 10.806437 12.317336 12.549128 8.933473 7.925177 4.906756 7.520640 10.543042 10.6144375 8.6134049 8.9134816 9.5294235 8.3904962 10.2167051 7.2394305 4.9334735 11.1011904 5.8019140 0.4871776 5.4506900 9.0021123 10.7907694 9.8172374 8.3661876 8.0706759 8.8700570 7.8966079 9.4662133 10.2192146 12.4901022 8.5618935 10.1407785 8.8691922 7.8674616 8.8550335 7.9810563 7.9918370 10.6280467 7.9016905 10.5269585 10.3600456 6.9629504 13.9261906 9.6257446 10.2751194 11.9580791 9.5310644 9.4690695 3.6888517 TCGA-D8-A1Y0 65 0 NA 472 breast stage iiia t1c n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 9 white not hispanic or latino 124.53.0 NA NA 1 2 NA NA 1 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.251513e-06 3.893595e-07 10.862640379 8.498983998 6.806797058 11.035659303 2.009132150 10.716494968 0.816476832 10.622004400 12.056259788 9.138419006 9.853841617 7.936914086 8.748916364 8.739606126 7.357864262 9.303182088 9.226487818 9.842421376 8.112423868 4.903954129 10.220415816 8.619238019 13.189083830 11.669800335 9.204508056 10.606257327 6.578991530 11.060171441 1.331074580 1.331074580 9.523356710 11.673916461 13.059282127 6.842025936 12.127346994 14.123955921 9.455702231 5.578990021 2.709577381 6.492952332 9.037041991 10.480557069 6.605325425 12.618025954 2.594094650 10.473936846 13.060939585 5.674471951 8.999140608 11.303900188 7.285260717 7.257063436 NA 13.688925485 10.656369443 1.009132150 8.739606126 NA 5.075224550 9.887953203 11.107661522 9.836875486 12.035140514 9.777320256 9.404670063 0.331017236 12.053956859 10.178121280 5.939873012 7.742151093 0.009203827 9.974920162 14.129130697 8.964531482 11.338511773 11.594685279 9.341731848 2.009132150 5.803552536 9.537589997 9.544897221 12.314413900 -1.990796173 4.468570284 6.891778844 11.363798516 11.471893736 5.247540212 7.067127772 4.777319762 10.120597664 12.348568387 1.594118543 13.474702280 5.107168941 7.697386021 12.030983398 11.301457498 13.120638371 8.265344530 10.233439089 11.322585836 11.036898488 12.006844640 5.148686044 8.678020832 11.994533126 11.845482171 -0.990796173 9.933577212 9.494965157 1.179065115 3.532067552 9.542952334 10.325983014 9.788444774 10.325417448 14.890261792 10.232232513 10.940981414 8.328808197 3.623843456 14.544760586 8.486894136 13.093404474 11.804668260 9.929860959 9.336688419 8.367786899 9.745436348 0.00166420 0.00166420 0.48045000 -0.02055600 0.24156000 0.47512000 0.45292000 -0.00761010 -0.55591000 0.01796300 0.01796300 1.01110000 0.02048300 -0.53470000 0.92270000 0.55974000 0.47942000 0.48854000 0.48854000 -0.54663000 -0.00401620 0.01460900 -0.50360000 0.02244400 0.02244400 0.04075100 0.02011300 0.03905400 1.09230000 0.00166420 0.00166420 0.02389200 0.02188400 0.02132300 -0.01945200 0.46127000 0.46331000 -0.54320000 -0.55591000 -0.54814000 -0.00332430 -0.00871460 -0.50629000 -0.01320300 -0.01320300 -0.01320300 0.02575300 0.00000000 0.00000000 -0.00097017 -0.54603000 0.48854000 0.02244400 0.02244400 -0.54663000 -0.53175000 0.00541390 -0.52379000 -0.50360000 0.02244400 0.06594200 0.04075100 0.03905400 -0.52133000 -0.00373950 -0.51971000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 -0.532 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 0.625 0.000 0.000 0.000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 -0.532 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 0.625 0.000 0.000 0.000 9.5987871 12.5247125 7.5997232 10.2038927 4.1513474 10.6740275 2.3310746 -0.9907962 8.6043935 7.6886161 2.3310746 8.4368152 3.0091321 10.3026075 9.7315166 1.9160180 10.1419569 10.1005713 7.9647856 8.8436070 9.6316636 8.4290962 10.5639645 4.1176618 9.7061035 9.4046701 5.5248347 -1.9907962 10.3211679 3.5327035 11.9889183 12.1074970 9.1183135 9.6173907 10.4121479 9.1313168 8.3026074 1.5941185 -0.4058337 3.2185952 8.2319306 8.0752251 10.6978233 6.0315033 5.6779507 5.6238464 9.5851477 7.2234554 9.5775670 NA 11.2173703 3.0535284 4.9039541 9.7352944 5.2892554 5.9339479 10.7276687 9.1377748 6.8229175 NA 14.0710977 1.9160180 9.9553111 NA 7.1176608 5.8917788 7.8795005 8.0792570 14.391675 6.709576 9.023156 12.127347 9.877187 10.843804 12.618026 12.170740 9.502491 11.600775 12.977353 10.246943 9.544897 8.731090 2.468557 7.151243 11.499987 11.1369690 8.2875854 9.0189646 8.8356844 9.5390545 9.5988386 7.6109067 7.6238457 11.6698003 5.8100369 -0.9907962 6.9487153 7.7689075 10.9391339 10.6740275 6.9309774 8.3512105 14.0689662 7.8035519 9.8368755 10.0276838 11.3127740 9.6877361 10.6475718 8.8569764 NA 8.6335017 8.8798243 7.0832772 11.4718937 6.0859515 10.4364487 10.1205977 8.1150442 14.0543836 10.2594343 9.8837331 12.8437057 10.2029692 10.1313168 2.4014666 TCGA-D8-A1Y1 80 1 302 116 breast stage iiia t3 n1a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 124.53.0 NA NA 3 3 NA NA 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.815932e-06 1.456992e-06 11.44269437 1.41619119 7.29881409 10.94501572 1.09423607 9.98906065 -0.32084648 9.72040810 11.33845801 10.52652379 9.67167162 7.50575361 9.03529041 9.41786053 6.36570653 8.77460226 9.00338579 10.01273347 7.44075624 1.90161030 9.61240429 9.60203758 8.78947105 11.49445521 9.52626272 10.69995385 4.64883355 9.91761002 -1.90562879 3.34217070 8.45947178 10.42823673 12.18691741 8.31341139 12.53854600 13.00685155 10.18666966 8.22352584 5.37964522 7.19490555 8.74619148 9.04989265 8.42403902 12.61627259 3.34217070 11.47551539 13.52707832 4.00113568 9.53950606 10.99812469 6.66409879 4.50363496 0.09423607 13.52518863 9.07152270 -0.32084648 8.88377659 -1.90562879 3.00113568 9.41335036 10.20765948 8.47794724 10.43270067 8.64883175 9.66789000 0.67924362 10.98222498 9.86902992 5.21318395 8.29268790 NA 8.60401793 14.43245692 7.12427540 11.20309395 10.61166621 8.60203739 1.26417609 5.93344753 8.35633752 8.55878842 10.83339052 0.41619119 7.14136637 8.03088063 10.30034146 11.10162060 7.04552706 5.84913108 5.33264707 10.02830227 12.07554253 4.04843674 13.66240680 6.92079111 7.90962612 11.57111561 13.80784416 12.29736139 8.05134491 10.30552280 11.27679237 10.76091069 10.70780214 4.51782369 8.58409098 11.21707085 11.21593821 -0.90562879 10.49618899 9.95338937 0.09423607 1.68997003 9.05207049 10.93049046 9.89149908 9.42235664 15.34234646 9.66314908 9.95494190 6.66029688 3.41617768 14.27826583 9.34572524 12.28105351 11.13778284 10.10267151 9.03822271 8.74977358 10.13323034 -0.41058000 0.79917000 0.79917000 -0.42529000 -0.41580000 0.01260000 0.00986690 -0.41542000 -0.40727000 1.12990000 1.12990000 1.19470000 0.00138680 0.02090300 -0.00584270 0.00430210 0.00430210 0.01447000 0.01447000 -0.42517000 0.01223700 -0.42721000 -0.03040400 -0.03040400 -0.03892700 0.00110930 0.00110930 0.00110930 0.37792000 -0.41058000 -0.41058000 -0.39397000 -0.40440000 0.01260000 0.00236760 0.00986690 0.00986690 -0.41542000 -0.40727000 -0.41553000 0.40801000 0.39463000 1.12990000 0.00000000 0.00000000 0.00000000 0.00000000 0.00146810 -0.01115900 0.00736090 -0.00699620 0.01447000 0.01447000 0.01447000 -0.42517000 0.01223700 -0.42721000 -0.44122000 -0.45814000 -0.03040400 0.00083195 0.00110930 0.00110930 0.37792000 -0.42265000 -0.43453000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.389 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.389 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 9.54493855 13.53186489 10.28499351 9.82173795 -2.22769203 9.94677238 0.09423607 NA 8.95842888 9.09635463 0.09423607 8.15457410 2.26417609 9.91880392 9.12904186 3.64883355 7.39115937 9.62805925 9.30734701 9.88132920 9.48855016 7.11105114 10.52155569 4.09424452 8.98906065 9.66789000 2.48655993 NA 10.54596914 3.04844546 12.86635119 11.84128191 7.89837404 9.74349898 8.68389397 9.62513676 4.18170686 0.90157169 0.09423607 9.18104265 8.41617092 8.39345095 9.53459295 0.41619119 7.50975205 6.75245424 10.15561403 6.37964522 9.47902659 NA 10.96634055 3.30369309 2.73809767 10.18752170 6.25350904 NA 9.53511204 8.53718617 -0.32084648 -0.32084648 13.74243188 -0.32084648 10.60698329 NA 6.64883211 3.26416107 8.42851595 8.21448087 13.580088 6.416171 8.864907 12.538546 9.953393 11.354133 12.616273 11.244783 9.366873 10.418345 12.945162 11.034373 8.558788 9.558789 1.679199 7.358685 10.562358 10.9574612 6.6178054 8.7990112 9.6607727 9.2452594 10.1950398 6.7981464 8.4779472 11.4944552 6.2027664 -0.9056288 8.7153790 7.8073717 11.4137738 10.6377580 8.6640984 8.8772412 10.2868438 3.5860922 8.4779472 10.8052645 10.8906881 9.5046943 10.6418604 8.9184059 NA 9.1465526 7.6430647 3.0942361 11.1016206 8.7290537 10.7920792 10.0283023 6.5371858 13.8156892 10.1991692 10.3236626 12.0913341 10.4919175 9.6716716 1.7946862 TCGA-D8-A1Y2 71 0 NA 433 breast stage iia t2 n0 mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 5 5 NA NA 1 3 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.39057e-07 11.92954459 5.87162930 6.83865180 10.93856986 -0.01100636 10.62076967 NA 9.84229581 10.71860702 8.50731141 9.53780817 7.20168581 8.72369575 9.50534295 6.50731102 9.19843964 8.91082708 10.13915673 7.52296515 5.10446247 10.23374657 9.92905509 12.72939952 10.50960500 8.88481402 10.66875958 7.38130414 9.96148746 -1.59596886 0.40403114 9.59754924 10.74526465 12.49214949 9.22898243 13.02515991 11.60323604 11.30394709 6.55377058 2.65195865 8.18865857 8.53330676 9.31091447 8.26666100 12.03030321 1.21138606 11.38469893 12.94838457 4.83029082 9.66869515 10.52004276 6.74832034 5.31091447 -1.59596886 14.40178854 10.34066174 1.57395614 8.31241650 NA 5.19843915 9.11826939 9.97767103 9.20249559 11.52652829 9.21379198 9.77089246 0.72595923 10.27977318 9.66141168 5.47011382 8.08526211 2.10447086 10.77960627 14.57824730 7.10515738 10.43054726 10.61378173 8.92464240 2.65195865 4.49148757 8.30790570 8.88783961 10.60951157 NA 7.27746781 6.98898683 9.95621249 10.85677986 6.95091860 8.15556761 7.13194439 10.04200705 11.69591393 -0.59596886 14.73897790 4.44841865 6.92366026 11.39890756 13.16177838 12.55234148 7.78556690 10.61317248 11.36583522 10.84515239 10.60277578 3.53330170 8.61469512 11.84424413 9.43606958 -1.59596886 10.57488771 9.77089246 0.98899364 3.16051687 9.09751072 10.24833725 9.56767340 9.00486595 15.05664473 10.41210224 10.00300680 7.71463637 6.10446247 14.52923544 9.83917308 12.94093878 11.94342496 9.50599947 9.33476110 7.76157583 9.51918450 -0.01061000 -0.01061000 -0.01061000 0.36711000 0.36711000 -0.02564900 0.37075000 -0.01171300 -0.01171300 1.08310000 1.08310000 1.08310000 -0.00190340 -0.00190340 0.01436700 0.82045000 -0.28617000 -0.00083000 -0.00083000 -0.41594000 0.00179820 0.00545050 0.42356000 0.42356000 0.42356000 0.82163000 -0.03413600 0.05256300 0.04291100 0.00281110 -0.01061000 -0.00548340 0.36711000 -0.36606000 -0.02564900 0.37220000 0.37220000 -0.01171300 -0.01171300 -0.01171300 0.00781500 0.00647400 -0.41450000 -0.00646860 -0.00646860 -0.00646860 -0.00646860 -0.00190340 -0.00190340 0.01436700 -0.39164000 -0.00083000 0.01129700 0.01129700 -0.39594000 0.00179820 0.01450600 0.14864000 -0.37659000 0.42356000 0.39401000 -0.34627000 0.05256300 0.04291100 0.00017519 -0.37197000 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.149 0.149 -0.377 0.424 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.149 0.149 -0.377 0.424 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 9.91330398 13.74974089 7.16557534 9.82976427 3.51839665 10.34653833 1.98899364 NA 8.29428806 7.75496297 NA 8.06834675 6.50205526 10.66376702 9.52685170 1.98899364 8.71690689 9.01227870 8.97577633 10.57175549 8.59252618 7.24951361 10.77607264 4.53330793 9.90735263 9.77089246 3.72594833 NA 11.04087497 0.98899364 12.82042551 12.70530563 7.69634512 10.35785646 10.07246560 9.72595191 2.65195865 3.72594833 -0.01100636 -1.59596886 9.19843964 8.87569898 9.29504798 2.98899364 6.62328893 6.58393271 10.23533108 7.28666680 9.99928129 -0.59596886 11.65535827 3.53330170 3.65194718 9.87458106 7.23177895 7.55630832 10.02973267 10.15682257 8.80276740 2.98899364 13.87334763 1.40403114 10.95212320 -0.59596886 8.99741492 4.74387576 8.00393668 9.01965355 12.800964 6.018734 8.725952 13.025160 9.966743 10.652841 12.030303 10.651655 9.495459 10.575201 12.876588 11.501068 8.887840 9.206540 2.491494 7.573949 10.521342 10.901127 6.211378 8.950918 8.187022 8.762675 9.925507 8.288194 5.903870 10.509605 6.420833 NA 5.522966 8.313797 10.906856 10.621073 9.215399 9.472802 8.868569 7.563895 9.202496 10.718040 10.527822 9.612258 10.313542 7.815535 1.404031 9.183497 7.298842 8.069360 10.856780 8.575201 10.735170 10.042007 6.743874 14.324935 10.920216 10.478165 12.961308 9.958133 9.661412 1.863463 TCGA-D8-A1Y3 61 0 NA 430 breast stage iiia t2 n2a mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.21416e-06 4.509738e-07 12.17381262 3.09097196 5.67593728 10.93297474 NA 8.70895109 NA 7.66026693 11.03022633 11.30906594 9.53145827 7.35289444 6.36950836 9.97587906 7.60521281 7.83393812 8.91540199 9.05204821 5.91351417 2.85965156 10.02826580 11.06230429 12.97231425 10.35637163 9.84189766 10.42155858 5.78729663 9.56490475 NA 1.33611197 6.95079616 9.02782971 13.14926610 9.46020747 12.58668067 12.25987788 8.51101175 6.54553908 1.65800578 9.02782971 8.27419549 2.97993387 5.50601157 11.87815072 NA 9.91209803 14.45011313 0.92105542 9.01874710 11.47547764 3.50600522 4.16897892 1.33611197 13.33046214 9.92245685 -0.66383089 8.68702533 NA 0.65800578 8.78832747 8.52343807 8.69693311 9.55283199 7.59582960 9.24972359 0.33605482 9.79500533 9.50287694 3.29027694 7.16263503 -1.66383089 8.07923729 13.82156959 4.82826091 9.58282675 9.14182998 9.86746764 -0.07902077 1.50599252 5.18157568 7.20645080 9.90736480 NA 4.67593446 7.52343807 8.81384435 11.01094044 4.50601157 5.16897491 6.48583253 8.58756864 11.72665818 3.97994301 13.15216982 3.33608340 6.23090428 9.61859547 12.54226110 11.71627661 6.87911759 11.65533488 10.30547264 9.25345822 10.08637444 2.72839946 9.56129367 10.89139427 11.71451651 -1.66383089 10.49438031 10.85940309 1.50599252 1.43871868 8.55161906 8.27860046 8.45632402 8.55161906 15.93925608 10.33150000 10.62552877 5.94341737 9.82593410 13.90999957 9.62437547 12.06475075 10.69611017 9.72194849 9.10922525 7.73696537 9.66385213 -0.3314700 0.4701100 0.4384700 0.4978300 0.0176520 0.0138790 0.0580490 0.5351600 -0.4763900 3.6569000 0.4929900 3.6569000 -0.0010018 0.0281080 0.4829100 0.4829100 0.4829100 0.0906870 0.0906870 -0.9882300 -0.2983600 0.0487970 -0.9743900 0.0391390 0.0391390 0.0330940 -0.4729200 -0.4571700 0.0427000 -0.2782500 -0.3314700 -0.4512800 -0.4619800 -0.4778900 0.0301370 -0.4864100 -0.4737600 0.5351600 -0.4754600 -0.4908100 -0.4686800 0.4959300 -1.0184000 -0.4846200 -0.4581300 -0.4750800 -0.9587800 0.0000000 0.0000000 0.4829100 0.4829100 0.0906870 0.0906870 0.0906870 -0.9882300 -0.2983600 0.0459590 -0.4499900 -0.9743900 0.0391390 -0.4753500 -0.4124800 -0.4571700 -0.4597400 -0.4599500 -0.4455800 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.458 -0.458 -0.365 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.458 -0.458 -0.365 7.9078389 11.7649697 4.6580115 7.9471109 1.7955176 10.4314832 1.3361120 NA 9.8274383 8.9627078 NA 6.1042696 -0.6638309 10.6537814 9.5289953 2.3360834 4.4446074 8.0190808 6.9907223 11.6557583 8.1582906 5.4550280 11.1239887 2.4235513 8.8399120 9.2497236 5.6759373 NA 11.0144663 0.3360548 14.6955097 12.5455395 7.2429768 8.8138443 12.0099473 10.0460315 0.3360548 3.4235513 -1.6638309 NA 9.8453663 9.7990996 9.8183900 1.1434587 6.6761136 8.3900120 10.0221489 4.7955176 9.9434165 NA 9.8601381 1.3361120 2.0365385 10.1518497 7.6579243 3.1434424 8.8625853 9.2519654 6.0225875 -1.6638309 14.4133191 0.9210554 11.0548331 NA 8.0893027 3.2902769 7.2033646 9.5497979 11.8221016 6.7872966 9.0260841 12.5866807 8.8508004 11.9932929 11.8781507 8.2459790 9.8142591 9.9068906 12.1468586 13.1877376 7.2064508 8.9049922 0.6580058 7.7811013 9.7950053 10.30223107 3.95079499 8.15786025 9.98444381 9.34609660 8.53816099 6.35845429 4.21872693 10.35637163 8.57926011 -1.66383089 3.14344240 8.60698884 8.25643894 9.25121870 7.97452186 10.64186290 6.38593486 4.85964659 8.69693311 10.83991189 9.82392622 9.54371066 10.12439664 7.47051246 8.66026657 9.75723581 5.80369201 4.33608340 11.01094044 4.26682401 9.78729728 8.58756864 7.53575827 14.35432981 11.34241224 11.15306981 11.79769350 10.67537949 8.63758235 -0.07902077 TCGA-D8-A27E 66 0 NA 530 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA other specify no 0 white not hispanic or latino 147.48.0 NA NA 2 4 NA NA 1 4 2 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 0 12.0995914 2.8477765 7.6259864 11.0519575 -1.7958593 10.7077472 1.0112809 10.1822744 11.7118399 9.0541083 10.0842703 7.9403236 8.8930457 8.5168043 8.3925102 9.0650084 10.9045779 9.6862253 7.1610230 3.3738431 10.2696742 10.2551303 13.9961271 11.9100937 10.0027981 10.7763848 5.1812020 10.1209204 -1.7958593 3.5258434 7.5570685 11.1644664 13.5985181 5.9521145 12.4444147 12.7679518 9.1471688 7.4470956 5.0368110 7.7411400 8.1435006 10.4841122 6.5122601 13.8366327 -1.7958593 9.0564510 14.1638102 3.7888840 9.4654817 11.0779422 7.0209055 8.9258751 NA 14.3228903 11.0688814 0.7888527 7.8513799 NA 3.4133774 10.1929611 10.2217738 10.8634714 10.6831965 10.3127726 9.7037673 0.7888527 11.7124590 9.7318870 6.9654726 7.9754107 1.2038902 12.1500053 14.5801825 7.3306516 11.9327985 11.7194981 7.6447908 -0.7961098 2.5962434 7.9621447 9.0272887 10.7435650 0.5258684 3.8477765 7.2262889 8.9301397 11.6510047 6.1926065 6.0112765 3.9588056 10.3058971 11.7661639 -0.2110638 13.4034021 6.6997765 7.8167898 11.9188109 10.0846528 12.7664024 8.1610235 10.4861412 10.5448842 10.8031207 11.1590264 5.2592047 8.2039215 11.7133253 11.9265155 1.0112809 10.1929611 8.8772304 3.6301841 2.7306182 10.0092622 10.2541102 10.0272887 8.8195510 14.8213172 10.5071314 9.8355532 8.6447908 3.5258434 16.6610177 7.9787087 12.6611741 11.6186067 10.1108120 8.7775686 7.9852813 10.2062653 -0.00166290 -0.00166290 -0.00166290 -0.00448040 -0.00110870 0.00547450 0.00000000 0.00791750 0.00284540 0.00265210 0.00265210 -0.00041585 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00485790 0.00000000 -0.00202040 0.00513590 0.00513590 0.00513590 0.00097064 0.00097064 0.00097064 -0.00166290 -0.00166290 -0.00166290 0.00013863 -0.00448040 -0.00283500 -0.00401620 0.00000000 0.00000000 0.00791750 0.00284540 0.00284540 0.00180300 0.00180300 0.00265210 0.00000000 0.00000000 0.00000000 0.00000000 0.00013863 0.00013863 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00194180 0.00485790 0.00000000 -0.00097017 0.00000000 0.00513590 0.00513590 0.00110930 0.00097064 0.00097064 -0.00166290 0.00208050 0.00819590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.9521145 10.8049958 0.2038902 8.8754625 3.5962434 10.6058675 -1.7958593 NA 7.9095541 8.5168043 -1.7958593 6.1350135 NA 10.4982550 9.0233022 0.5258684 7.1754647 9.0919037 13.8311418 10.5732461 9.9357581 8.3447513 10.2730355 3.6633560 9.9173079 9.7037673 3.4893246 NA 10.2676535 2.4518573 12.8782793 12.2507044 7.0773659 10.9636016 8.2619130 9.0704277 6.7623422 -0.7961098 -0.7961098 0.2038902 9.4351427 9.4922107 9.2283685 1.6633446 9.1708019 7.7235579 10.7002759 4.7737748 9.8965369 NA 13.9143781 2.3738431 11.8392995 9.6770589 5.8251674 1.0112809 8.2304447 8.2318274 6.1346584 NA 13.6926089 -0.7961098 11.1716881 NA 9.0446993 4.8904224 7.6026655 10.1511932 14.4683965 3.6301841 9.4613094 12.4444147 10.7418678 11.0104710 13.8366327 12.6898765 9.0850355 10.7413825 12.5035588 11.5223230 9.0272887 6.2753833 -0.2110638 7.1954431 11.1849535 10.757791 8.665401 8.461309 9.019305 7.924473 9.809619 6.691762 6.043126 11.910094 7.563671 1.525868 5.489325 5.712034 11.049412 10.037997 9.167540 8.682691 11.720976 4.470706 10.863471 10.533998 11.775437 9.128734 10.447393 9.778515 NA 9.437271 10.593969 2.958806 11.651005 7.785122 11.086756 10.305897 7.198275 14.297750 10.782766 10.452146 13.225769 9.114564 9.487589 1.525868 TCGA-D8-A27F 40 0 NA 488 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 147.48.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1.056833e-06 2.781139e-07 12.9162041 6.8327280 6.8361501 10.5811279 NA 10.6775324 NA 9.7466833 11.0179918 8.4039174 9.1818134 7.4593472 8.6258155 10.7368744 8.4835578 8.7562000 9.5207247 11.2313954 9.5943265 4.2025118 9.6341963 12.6568136 12.8996863 9.9151425 10.5821475 10.8653398 3.4004560 10.7505406 4.3245082 1.4369613 8.7971683 12.0795728 13.4147603 7.8749396 11.9060108 11.2579563 10.8444598 4.8565177 2.1150665 5.6542092 7.7018914 8.5265626 9.0685203 6.2749232 -0.2999155 13.2169861 7.9683609 9.4442871 9.8809509 11.0230687 8.0966187 7.9224066 2.0219416 12.8123845 7.1484745 -0.2999155 8.4737025 NA 3.7874743 9.5533234 10.5711492 9.9699199 9.2812146 10.0472663 10.5431499 3.6696391 11.9183754 11.5666490 4.2443315 6.1703337 1.4369613 8.6725152 16.2328924 8.2321619 10.9280309 10.7772748 9.5522833 6.9352299 0.1150332 6.8799226 9.6834826 11.4279344 NA 3.2025118 7.4879164 10.1614935 10.3275478 6.8015519 6.0634188 5.6307520 8.3208448 11.8724415 2.5744891 13.1231737 4.6849085 6.2546035 12.0599465 13.1512680 13.0828181 6.3582257 11.6542103 10.5262976 10.5879402 11.4669569 5.3534574 7.8782637 11.7611601 9.6527552 -0.2999155 10.6191256 9.8067950 1.9223882 3.9481990 10.1356843 8.8506075 10.7316003 9.8910731 14.9903449 11.5402674 10.0553650 6.1037368 4.8292965 12.9932461 7.1374195 12.8329420 11.5019917 9.8497612 10.1532846 8.4027640 9.8384351 0.0417410 0.0397610 0.0259520 -0.6149900 0.0668020 -0.6054500 -0.0287650 0.1382000 0.1382000 0.0000000 0.0000000 0.6059300 -0.6449900 -0.6136400 0.0171240 0.0022193 0.0022193 0.1103800 -0.6134500 0.0146090 -0.6096000 0.0190830 -0.6377400 -0.6377400 -0.6313100 -0.0666540 -0.1242100 -0.6719600 0.0098669 -0.6590100 0.0417410 0.0336900 -0.6149900 -0.6253200 -0.0347680 -0.6153700 -0.6153700 0.1382000 0.1382000 0.7467000 -0.0134020 0.0884030 -0.6623400 -0.6185300 -0.6185300 -0.6208300 -0.6208300 -0.6136400 -0.6222600 -0.6164300 0.0084743 -0.5284900 -0.6134500 -0.0304040 -0.6191100 -0.6116200 -0.6332000 0.0119580 -0.0235660 -0.6377400 -0.6215900 0.4837200 -0.6719600 -0.6346200 0.5604500 0.4899200 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 7.3606039 13.2051225 3.0692553 8.6571158 4.4942556 11.7480466 1.5744891 8.8395654 8.7223817 8.2584346 5.3147255 8.5748315 7.7223820 9.8412696 9.5538433 5.1374175 7.9558295 10.8560970 6.1649009 9.3061107 8.9648084 7.9558295 11.8808555 2.5744891 9.5554017 10.5431499 2.2849878 -1.8847004 8.8873659 2.9730234 12.8149492 12.0441249 7.3935011 10.1030260 8.0144083 8.5631677 3.6069041 3.5073634 -0.8849668 2.2025118 7.8258581 8.7158937 5.8292965 5.7149653 9.1306408 7.1290717 10.1384593 6.7297608 10.2628923 2.5073634 12.7773304 4.7000124 5.8766029 9.6341865 7.1776378 4.3438697 8.5019916 8.2430459 5.5826584 5.4369780 12.8557809 -0.8849668 11.1053328 NA 10.2999268 4.4369813 8.8548319 8.3317975 12.050742 8.399297 7.958973 11.906011 10.026069 10.639103 6.274923 11.932135 9.649247 11.165240 13.005648 10.785929 9.683483 6.896411 1.815493 7.709376 10.797388 10.6141499 8.5513884 8.8318709 8.7306810 5.3245046 9.3935067 4.9976944 4.7149653 9.9151425 8.7037662 -0.8849668 9.4090977 10.7496901 13.9725222 9.5912914 7.7857075 7.9792377 9.7989233 5.4726047 9.9699199 9.3042582 13.1312068 11.6580833 10.5808729 10.1037362 NA 9.7298763 8.3206738 5.1374175 10.3275478 7.7962902 9.5071756 8.3208448 7.6831596 14.0507688 9.6624281 10.7848224 13.0249914 11.8319781 9.1408832 1.6999957 TCGA-D8-A27G 75 0 NA 409 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 147.48.0 NA NA 1 3 NA NA 1 3 2 3 5 2 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 4 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1.963484e-05 4.894805e-06 11.5096911 8.2932132 7.2524431 11.3368399 NA 9.9460340 0.9578403 10.0724326 11.8034434 8.1591296 9.8085303 7.7694650 9.6897073 9.2073311 7.6302482 9.3458399 10.2973015 9.8801593 7.5920287 5.3386455 10.8445354 9.6046813 8.3700396 11.4781139 8.8905294 10.3436851 7.1109520 10.6871601 -1.6272707 1.1802115 9.1024810 11.3620772 13.0250889 8.0257049 14.2236818 13.2874321 9.2872453 6.3035981 4.9274509 6.6766412 8.3212273 8.7683944 7.8240715 13.4548012 NA 10.4679275 13.4125931 2.8322824 8.9849268 10.6863101 7.2277286 8.1294165 -1.6272707 13.9459496 9.1818244 2.5427781 7.8095714 NA 4.8647111 9.4382762 11.2267545 9.3270565 12.7584529 10.5490333 9.9455603 0.3728407 11.4942317 10.1327483 6.1476466 8.0750330 1.5428028 11.9351026 14.7290026 7.3819608 10.8386816 11.4141770 8.1294165 2.1802115 5.7304117 8.6040813 9.5663856 11.5962585 NA 5.8158034 7.3615447 9.7320606 11.2816280 7.9764862 6.6302482 5.5920294 10.4810578 11.7146569 1.3728407 14.3338576 5.3501401 7.0939594 11.8735775 11.8633350 13.0776824 8.2707055 10.7383624 11.1944349 10.7553437 11.3199491 4.8964220 8.6384750 12.5043152 12.2827532 -0.6270479 10.2838776 8.8727060 1.5428028 3.2372884 10.0126530 9.7886019 10.3024884 8.9774133 15.0821863 9.9657843 9.8601977 7.8607003 2.6207975 15.6602839 9.4669378 13.8563925 11.6167779 10.4018022 9.2370462 8.2104882 10.3541063 -0.47733000 0.46964000 0.46964000 -0.00356910 0.00013863 0.00208050 0.00166420 -0.00470790 -0.04447800 0.00263570 0.00263570 0.00000000 0.00305220 0.00305220 0.00861350 2.33910000 1.04640000 0.00240630 0.00240630 -0.00166290 0.00124810 -0.00083160 3.39790000 0.81942000 2.28380000 -0.02151000 -0.02151000 -0.02151000 -0.00180140 -0.00318590 -0.47733000 -0.00263220 0.00249690 0.00208050 0.00208050 0.00166420 0.00166420 -0.00470790 -0.04447800 -0.04447800 0.00194180 -0.00456950 0.00263570 0.01167900 0.01167900 -0.00613330 -0.00613330 0.00305220 0.00305220 0.01000600 -0.48086000 0.00240630 0.00000000 0.00000000 -0.00166290 0.00124810 -0.00083160 -0.49486000 -0.50006000 -0.49246000 0.00736090 -0.56206000 -0.02151000 -0.01711600 0.00166420 -0.00373950 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.41930207 13.71403144 2.83228244 10.20851580 3.00570538 10.99879723 1.54280283 -1.62727073 8.24476531 7.78437115 NA 8.11432694 3.27975357 10.59021201 8.87370187 1.37284069 10.46297253 9.28125267 11.94851755 10.08280556 10.14430836 7.10417938 10.39592137 2.76517403 9.05585479 9.94556030 4.62078579 NA 10.49050324 3.41725844 12.11432710 12.20278103 8.51624331 9.85365030 8.18503745 9.49244969 5.41725506 -0.04215967 0.69474650 2.89642686 8.27674184 8.58960583 10.51751842 5.25550451 8.69743433 6.37848388 9.96204315 6.57253198 9.80383535 NA 10.25817522 3.18021153 5.16727763 9.59471313 7.16678874 4.30359812 9.97416661 9.15831254 7.56021206 NA 13.30779490 5.04528569 10.01716711 NA 8.31830419 4.71271132 7.98940869 8.70713339 13.3978409 6.1143275 8.6396468 14.2236818 10.1046035 10.8727060 13.4548012 11.6814836 10.0345759 10.8374059 13.3168400 9.3707452 9.5663856 11.1828292 0.6947465 8.8199434 11.0845271 11.585508 6.100780 8.093959 8.535251 8.124404 10.523312 7.237046 6.411779 11.478114 4.912017 -1.627271 4.848593 7.617795 11.585812 10.455342 7.483995 9.312439 11.839319 6.212063 9.327057 10.472537 10.964149 9.852640 10.248993 9.043516 2.180212 9.218970 8.486433 6.154221 11.281628 8.293213 11.489691 10.481058 6.786488 13.084258 10.340447 10.019869 12.172041 10.463634 9.830754 1.372841 TCGA-D8-A27H 72 0 NA 397 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 147.48.0 NA NA 4 1 NA NA 2 5 1 6 5 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.879294e-06 6.591155e-07 11.93078693 6.22844739 6.18158165 11.10852086 -0.54624539 10.67222439 -1.54624539 9.49258007 11.43825760 7.72745695 9.81505661 8.45225154 9.06283974 10.96046458 7.96343598 8.89867605 9.91769624 10.69206587 9.60277309 NA 10.04143862 12.80287324 13.78219581 10.46768155 11.27463784 10.36916709 4.62358597 9.75857701 8.36205384 4.31164116 8.16618819 11.38051301 11.68067533 8.98406750 12.08767800 13.45427738 11.49223721 5.03862493 2.54111830 7.11187222 8.47602883 11.90190650 9.37995706 6.27384035 NA 12.24665472 6.40202801 8.23993070 9.07487039 11.18115617 8.27702837 7.44801468 -0.54624539 14.23001396 10.86411246 3.26101924 8.37698879 -0.54624539 4.31164116 9.31629850 10.18837076 8.96837506 8.75401361 10.00151966 10.39066704 0.77559843 11.25294277 10.70543938 5.36055040 7.77784181 1.62358597 5.85454179 15.31668583 8.19013085 10.54244940 10.59481034 8.17817482 2.26101924 2.15409709 9.77784165 10.37921557 10.03439071 NA 6.10471196 6.62858698 10.53846949 11.37736000 6.35452797 5.14016104 6.86305260 10.29561857 11.50282902 0.03857665 12.86364863 2.70159341 7.20854847 12.75786983 12.95275957 12.72694680 9.61227084 11.25476321 11.27822218 10.88307572 11.91603559 4.77558790 7.41655688 12.87421353 9.76881074 9.04424820 10.91718550 8.30228386 2.62358597 2.90519684 10.70247816 8.71693021 10.42664090 10.88280626 15.01127440 10.97746805 9.92330297 7.32710528 5.88829028 12.23071093 4.33630481 12.94513848 11.58696393 9.06376312 9.93243077 8.07754264 10.42691005 0.5640100 0.0095883 0.8022800 0.4337800 1.1806000 -0.0167040 1.4469000 -0.6830500 -0.0127130 -0.6394400 0.0197830 1.0865000 -0.6333900 0.0044411 0.0000000 0.5394200 0.5394200 -0.0257560 0.0045800 0.4026100 0.0143300 1.6495000 -0.6121000 -0.6121000 0.6375500 -0.0124380 0.0075000 0.0075000 0.5617000 0.0259520 0.5640100 0.5232800 -0.6296900 0.0058309 -0.5974000 -0.6406700 -0.6340900 -0.6830500 -0.0121620 0.0966700 0.0148880 -0.0063668 -0.6394400 -0.0120240 -0.6151800 -0.0052610 -0.6247500 0.0044411 -0.6844200 -0.6333900 -0.0523960 -0.0257560 0.0045800 0.0045800 -0.0461770 0.0048579 0.3490900 0.0400440 -0.6298000 -0.5878400 0.3265600 -0.0421100 0.0075000 -0.6599400 -0.0098185 0.8558100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 9.040501 14.428613 6.118997 10.809287 2.154097 10.370660 1.038647 6.174760 8.221846 9.225151 2.913090 10.311253 7.416557 11.049385 8.901777 2.845972 7.871513 10.201015 5.977223 8.678868 9.712280 7.582944 13.299004 2.625995 8.190063 10.390667 4.008254 NA 10.762000 3.453662 12.125644 12.686307 8.938484 10.408948 8.752869 9.441636 6.348479 1.453649 -1.546245 2.775598 8.416557 9.281004 7.273840 3.775588 9.841829 6.221846 9.325566 8.880974 10.645954 -1.546245 11.941501 2.038612 3.311648 9.245801 6.109371 4.407856 9.033920 7.503509 6.118997 1.038647 12.964672 1.453649 11.245435 NA 8.588088 4.038621 8.603408 8.932431 13.721137 6.459286 8.127854 12.087678 10.411822 10.519077 6.273840 14.093341 9.335540 11.393240 12.198915 8.420887 10.379216 7.996693 2.261019 9.124317 11.648418 10.512329 4.038621 9.316299 8.013994 5.126085 9.531979 6.419446 6.743681 10.467682 8.663114 5.261015 7.725124 7.946316 14.180544 9.102917 7.459286 8.835204 10.637297 6.126087 8.968375 9.447307 12.975200 11.212093 10.340120 9.587445 NA 10.115163 7.766318 5.682481 11.377360 9.145405 9.611640 10.295619 7.882021 13.689301 10.017334 10.644103 12.270445 10.307361 9.345445 2.154097 TCGA-D8-A27I 58 0 NA 439 breast stage iiia t1c n2a m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 4 white not hispanic or latino 147.48.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.668684e-07 11.3451690 9.7802699 7.7950182 11.3114833 4.0027295 10.3269521 -0.7786797 10.3541918 11.5370866 9.0125338 9.6450120 7.9994482 8.9096213 9.6142249 7.4834659 9.3906696 9.7331235 9.7940711 8.3416087 4.0793525 10.6991292 10.0230793 10.8661285 10.9957462 9.1476669 10.4896204 6.5251512 10.5370866 1.2213822 2.6136967 9.5756202 13.0157360 12.5001833 8.6158338 12.5365204 12.7424192 9.1965023 5.5342546 2.1282604 7.4549901 8.8370006 8.9192072 8.4752183 11.7038007 1.8063241 10.5550853 12.9072147 6.1929141 9.4906730 10.9405457 9.6761842 4.3298986 NA 13.4524506 11.8882606 4.1755645 8.9043655 0.8063653 5.5251512 9.6730972 10.4366005 10.1021023 11.4752184 10.1241229 9.8647761 5.9560799 11.4576841 10.1063045 6.2657651 8.5217233 2.6807969 10.8679296 14.4607083 8.3030008 11.4986583 11.0978878 8.7537269 1.3912728 1.6808194 9.0455342 9.3749230 11.9370112 -1.7784322 3.9492921 7.0190324 10.2029381 10.6460621 5.9560799 6.7566457 6.1929141 10.0275176 11.8434227 1.6808194 13.5405490 5.8724225 7.3837622 12.0475221 11.9832337 12.7562209 8.2616606 10.4822904 10.9920348 10.6454532 11.0992301 5.1161901 8.4050061 11.5628897 11.5470979 -0.1936347 10.6048051 8.9978039 2.3088268 4.0372065 9.7056903 11.0349517 9.7429713 9.3881615 15.0576309 10.1802860 9.8222129 8.4537916 4.1755645 14.8701497 9.1402342 13.5668454 12.2511757 10.3341362 9.4507906 8.3403121 10.3436910 -0.1007600 0.3887700 0.3915200 -0.0119890 -0.0119890 -0.0056941 0.2313600 0.0036538 0.0000000 0.2462600 0.2462600 0.2462600 -0.1224800 -0.1224800 0.0175790 0.0175790 0.0175790 0.0055882 0.0055882 -0.2361500 -0.2258500 0.0069789 0.0060053 0.0060053 0.0060053 0.0068398 0.0068398 0.0068398 0.2746200 -0.0979890 -0.1007600 -0.0238830 -0.0119890 0.0209390 -0.0056941 0.2313600 0.2313600 0.0036538 0.0000000 0.0000000 0.1458100 0.0980160 0.2462600 -0.0231100 -0.0231100 -0.0231100 -0.0157060 -0.4853100 -0.1307900 0.0175790 -0.1909600 0.0055882 0.0055882 0.0055882 -0.2361500 -0.2299800 0.0069789 -0.1473000 0.0060053 0.0060053 0.0065616 0.0068398 0.0068398 0.2614100 0.0039207 -0.2353000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 9.8889260 13.6515947 8.4681116 10.4904975 4.7715000 10.3618812 4.4881551 2.6136967 8.6848952 10.0279205 NA 9.0482768 5.5876920 9.9957461 9.0894216 2.2213822 10.3641162 9.8222129 11.0940457 9.7192226 9.7338102 7.9287298 11.4321944 4.1040179 9.1957856 9.8647761 5.4501885 NA 10.5108134 4.4111957 12.5630287 11.9177951 9.0051877 10.2681539 8.5365204 9.1394887 5.3506528 2.7449361 0.8063653 2.0287106 8.7370709 8.8507276 9.2561698 7.4645449 8.2422257 5.5700986 10.0656843 6.3557968 9.6029139 -0.1936347 11.5789229 3.1282604 5.6889776 9.6412731 6.6691983 6.1161880 10.0542609 8.4393285 7.9131144 0.5432979 13.6442241 1.6808194 10.5393487 -1.7784322 7.9252743 6.9628382 8.1491491 8.8679295 12.6390593 4.8937942 8.4951663 12.5365204 9.7581038 10.5556442 11.7038007 12.1684598 9.3253142 10.8973279 13.6448479 11.7817037 9.3749230 9.6920298 0.2213203 7.4405395 11.5452701 11.4618641 7.3403121 9.1192164 8.7912264 8.6158338 10.1701322 7.5855057 7.3351134 10.9957462 6.9729155 5.2437376 6.7950175 7.4363942 11.4727054 10.5305630 8.6601628 8.5331191 12.7224616 7.5455514 10.1021023 10.0758497 11.1936327 10.3422567 10.5288563 9.0035500 0.8063653 9.2187620 7.9945927 7.4210432 10.6460621 7.9509915 10.7274305 10.0275176 7.6539127 13.8534567 9.9411875 10.2157243 12.7106544 10.4344751 10.1051597 1.3912728 TCGA-D8-A27K 47 0 NA 287 breast stage iib t2 n1a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 147.48.0 NA NA 2 4 NA NA 3 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 10.45006980 7.40643123 7.76930892 11.04951165 -1.61882740 10.90240112 -0.03371721 10.09338851 12.19747516 10.76229358 10.00928124 8.66900373 9.00242771 9.34274118 8.24237862 9.56306487 10.57111609 9.90436337 7.22049538 0.96628279 10.75904428 9.96578428 11.98190134 11.13638771 9.59985465 10.42670987 6.48457964 11.09144570 -0.03371721 5.88113844 8.76930892 12.87795806 12.95090978 6.67591188 13.41161377 13.39927427 9.62148653 7.26087438 5.28818135 6.38691611 8.68621301 10.48457934 7.97187861 13.12281114 4.05371957 9.44266260 14.17161453 7.75633081 9.13786441 10.85980831 8.98399029 5.06779358 NA 13.64259274 8.89304422 4.18864621 8.92045022 0.96628279 4.02514399 10.21536749 10.75170648 10.45040555 11.76903960 11.15360605 9.87914333 6.26393393 12.38199575 10.36713339 6.57111552 9.10750977 6.27610951 11.83108496 14.54315162 9.00910807 11.95553022 11.84864230 8.99231638 2.28818135 4.02514399 9.35139732 9.30387594 12.28262983 -1.61882740 5.50023162 7.10239044 9.46344059 11.44906196 5.61969765 6.79068213 4.61010945 10.73719317 12.05846056 1.55119607 13.31318319 6.29418144 7.80125180 13.33284942 12.40764201 13.18658193 8.14947583 10.37847098 11.20485776 11.12461124 11.53087984 5.43657497 8.43250056 11.83301775 10.53832252 NA 10.16715254 9.14947583 1.84072506 4.40432413 10.35892916 11.02469679 10.67390070 9.61670744 14.56585694 10.16347068 10.08519505 9.10153584 2.55122068 15.63029380 10.25204151 13.71490111 12.80834237 10.52786021 9.84072317 8.68049948 10.88939323 -0.00332430 0.92452000 0.92452000 -0.00456950 -0.01519100 0.00000000 -0.00618010 -0.01147300 -0.01147300 0.00847430 0.00847430 0.00847430 0.00833510 0.00833510 0.00319100 0.00319100 0.00319100 -0.00329920 0.00194180 -0.00327860 0.00569190 0.00235810 -0.00235530 -0.00235530 -0.00235530 0.00124810 0.00124810 0.00124810 0.01377200 -0.00332430 -0.00332430 0.00000000 -0.00456950 0.00000000 0.00000000 -0.00618010 -0.00618010 -0.01147300 -0.01147300 -0.01147300 0.43855000 0.44088000 0.00847430 -0.01546600 -0.01546600 -0.01546600 -0.02532900 0.00833510 0.00833510 0.00319100 0.00319100 -0.00329920 0.00194180 0.00194180 0.00055459 0.00569190 0.00235810 -0.52102000 -0.00235530 -0.00235530 0.00750000 0.00124810 0.00124810 0.01377200 -0.00691950 -0.02258000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 9.5233985 12.5115403 5.4365750 9.6896304 2.9010889 10.8987148 3.0251529 -0.6186059 8.8096517 7.5931797 -1.6188274 8.0660402 1.5511961 9.9657843 9.0051729 0.7031893 9.6787809 9.6083057 9.7703851 9.0124687 9.8093323 8.0233430 10.0426242 4.4036563 10.3784710 9.8791433 5.9511471 NA 10.1687859 3.0817316 12.6145367 11.8996987 7.5208426 10.4587749 8.0215364 8.8989608 4.5310383 1.9662459 1.5511961 8.8999448 8.1740818 7.9243232 10.2780023 4.3812903 8.6768425 5.5411617 10.3127677 6.3354886 9.6392685 NA 9.9987589 3.3812972 4.4898191 10.5065629 6.2298513 6.8117446 8.6827878 8.4352173 7.4740490 -1.6188274 13.6173431 2.2881814 9.6666938 NA 9.5021774 4.7906834 8.0572483 8.5834153 12.8136944 5.1886462 9.0359276 13.4116138 10.3692660 10.8065074 13.1228111 12.6266956 9.5008162 11.1777063 13.7486380 9.5729677 9.3038759 8.7222542 0.9662828 7.4872001 11.9251692 11.469417 7.873144 9.312768 9.274593 8.708844 10.611378 7.152781 8.234601 11.136388 5.648077 7.910722 8.306104 6.729710 13.111018 10.857531 8.243759 7.349958 12.313229 7.578509 10.450406 10.253197 11.272126 10.019275 10.773341 9.454764 1.381283 9.576670 7.914446 7.756331 11.449062 7.285174 11.067685 10.737193 7.703220 14.108414 9.623275 10.403312 13.533022 10.938276 10.323439 3.551221 TCGA-D8-A27L 49 0 NA 499 breast stage iiia t1c n2a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 147.48.0 NA NA 2 5 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.224912e-07 10.8627704 8.9480968 8.7104641 11.4019089 -0.8847004 10.7434244 -1.8847004 10.2531585 11.9506651 11.4579759 9.8957466 7.7805424 8.8883460 9.5176859 8.1906860 9.5037621 10.2813699 9.7285359 7.7805424 5.4006097 10.8277338 9.8596202 13.0781027 11.2357686 9.4842588 10.3942368 6.4945852 10.6125322 -0.2999155 7.8017071 9.2592275 13.1031813 12.5889125 7.6888538 12.6626435 12.4724151 9.7303766 4.9480962 1.4371212 7.0009037 8.7345098 9.9329898 8.4880719 12.5117446 6.1650557 10.2920033 13.4075643 7.7427406 9.3900799 11.1159110 7.5622897 5.3440260 -1.8847004 13.8339376 12.3084533 3.6070580 8.5633229 1.2851063 5.9289885 10.2318756 10.3515200 10.3690542 12.4681467 10.4303563 9.7368009 5.9544104 11.8089115 10.1077910 7.4967499 8.1389609 10.2772833 11.5029548 14.7142042 9.2482782 11.8912285 11.5787311 9.3924941 1.5746344 5.6697950 8.8742627 9.2807418 12.1012265 NA 6.0459431 7.0400190 10.2092845 10.9106376 6.7734188 6.8998415 5.5909403 10.5589274 11.7251934 2.4371478 13.3875814 7.8516085 8.3488264 12.5452672 13.0400192 13.0274880 7.9079968 10.3047224 11.1130919 10.6782766 11.4045052 5.5414715 8.5309486 12.2600243 11.6825687 -0.2999155 10.3916220 9.5005300 1.9225785 4.9615724 9.9716322 11.2132388 10.6150526 9.9970855 14.5593481 10.1046012 10.4343143 8.6841129 5.1264360 14.7637188 9.8579372 13.9001227 12.5973214 9.9859568 9.6239919 8.4224075 9.8015629 0.00917050 0.00917050 0.00917050 -0.04698900 -0.04698900 0.00332990 0.00000000 -0.00193990 -0.00193990 0.42435000 -0.28501000 0.64873000 -0.00277070 -0.00816240 -0.00553750 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.01532900 0.00410960 0.00027728 -0.00415460 -0.00415460 -0.00415460 0.00694350 0.00694350 0.00694350 0.41798000 0.00917050 0.00917050 0.00000000 -0.04698900 0.00332990 0.00332990 0.00000000 0.00000000 -0.00193990 -0.00193990 -0.00193990 0.00097064 0.00097064 -0.45319000 -0.00360110 -0.00360110 -0.00360110 -0.00360110 -0.00816240 -0.01425400 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.00249380 -0.01532900 0.00541390 0.00027728 -0.47765000 -0.00415460 -0.00415460 0.00124810 0.00694350 0.00694350 0.41798000 -0.00387790 -0.31354000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 9.7814307 13.7830390 9.8003936 10.1406924 4.0100279 10.2678085 2.6387689 0.9225785 8.0679479 7.7518312 0.1151664 8.6640287 1.5746344 10.3003919 9.2224237 2.2851359 9.6601712 9.8604608 9.7513782 9.4809824 9.4246887 8.0039502 11.0039500 2.5667421 9.3930753 9.7368009 4.8833911 -0.8847004 10.5224745 2.2851359 12.4853492 11.9907641 8.2826247 10.2220968 8.0621131 9.0115392 6.0924865 2.0220837 0.7001733 11.8306325 8.6417061 8.9071836 9.7062615 4.9978479 8.0009183 6.3000816 10.2963590 7.0130524 9.5069873 -1.8847004 10.2763386 3.7590599 4.4550576 9.4537538 6.2496843 6.1486291 9.8165132 8.8328831 7.9449293 -0.2999155 13.2506756 -0.8847004 9.9630471 -1.8847004 8.6543657 5.2649530 8.1704889 8.8949260 13.2003696 5.4371345 8.5990224 12.6626435 10.2278808 9.9669557 12.5117446 12.6156752 9.2662232 11.1517238 12.8467379 9.4017644 9.2807418 8.5425196 -0.2999155 7.3536118 11.8585685 11.352417 7.446124 9.088186 9.533059 8.735427 10.514105 7.477150 6.846526 11.235769 6.801707 3.363129 6.688855 6.984462 12.094364 10.555816 8.686011 8.509669 13.306266 7.866751 10.369054 10.334678 11.690391 10.313038 10.495938 9.689800 -1.884700 9.628969 7.778374 7.384333 10.910638 8.862560 10.774179 10.558927 7.562290 13.618691 9.979006 10.211263 13.075254 10.606058 9.903925 2.115200 TCGA-D8-A27M 59 0 NA 410 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes NA white not hispanic or latino 147.48.0 NA NA 4 5 NA NA 2 5 1 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.084644e-06 2.781139e-07 12.8894557 6.5292666 7.2919700 11.4501955 0.6223682 10.8847063 2.4703807 9.8444469 11.6155979 10.6505588 9.1537580 8.2356136 8.6358389 9.7963035 6.7309008 9.8872881 9.5135525 10.4536837 10.2805880 6.7098393 11.0622073 10.8381521 12.7059887 10.6102089 10.1285848 10.3193440 7.6133313 10.0461184 6.0553367 0.8854182 9.7644835 12.7656321 12.3097521 9.3725811 11.1867165 11.4034082 10.6730414 5.6667708 2.6223682 5.7183013 8.7319459 8.5062417 7.9834429 5.6223769 2.3879139 13.1022072 9.0678051 10.1094125 8.8647504 11.3203865 8.2193118 5.6841539 -0.6994662 15.9566473 11.7844379 2.3879139 8.6155980 2.8854182 6.1269976 9.6414111 10.7490809 9.2590010 11.0690462 9.5759909 10.6678631 2.2073307 11.8489091 10.5800590 5.5292681 8.3852567 0.8854182 5.7350753 15.6686393 9.5400707 11.4514649 10.4976651 10.4213342 0.8854182 -0.6994662 8.9406933 9.7746612 11.0116852 0.3004166 5.8854109 7.8396069 10.6844226 10.8087383 7.5292673 8.1333385 7.2862907 10.7626950 11.6040864 -1.6994662 13.2420004 3.8240142 7.1301710 12.0694597 12.3180398 13.0463327 7.8141761 10.8442052 10.9532933 10.6865749 11.9126258 5.5196174 7.6535953 11.9729842 9.5817988 3.9443056 10.7196186 9.6612955 2.1077883 3.8863160 11.0442309 9.2267443 10.5780264 9.7593676 15.0867563 10.5031844 10.9915376 7.5412399 2.8240142 12.7255331 7.9764055 12.5746809 12.3445009 9.6065101 8.9737573 8.5292669 9.6378584 -0.1016900 0.0000000 -0.1270700 -0.2709300 0.0411750 0.2087000 0.0873900 -0.1086200 -0.3613600 -0.3723400 0.4830300 1.5159000 0.0552300 -0.3613600 -0.0024938 -0.0024938 0.2307100 0.5861400 0.0431570 0.1249100 -0.2753500 -0.1956200 -0.2914200 -0.2914200 -0.2638400 -0.2787000 0.6845900 -0.2942600 -0.3277400 0.1919300 -0.1016900 0.3322700 -0.2924800 0.3685400 -0.1566300 0.0873900 -0.3272800 -0.5921400 0.0968160 -0.3516800 -0.1140200 0.1974000 -0.4013000 0.0342540 0.0342540 -0.0108030 0.0553730 -0.3613600 0.0421660 0.0348180 -0.2934300 0.1124200 0.0431570 -0.3219300 0.0860880 -0.1403900 -0.3612400 0.0077602 -0.2914200 -0.2914200 -0.1436100 -0.2787000 0.1998400 0.1379100 0.4857800 0.3724900 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.279 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.279 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 10.0628304 13.3954745 4.5099048 10.6138983 5.5388516 10.5754089 6.4952059 5.1584299 8.9307155 9.1654083 5.5672351 9.5332351 5.0553345 10.9345787 8.8900995 -0.1146599 9.3455254 10.5391516 8.0181251 8.3732510 10.1700229 8.4952051 11.9261572 3.1584340 8.8151623 10.6678631 2.5483873 -1.6994662 10.3081764 3.4297365 12.0454924 12.5667225 8.5364625 11.0777036 10.0351580 9.1669547 6.8002942 3.3448427 1.1078218 NA 7.5950695 9.0112549 8.0164105 5.7516592 8.8762901 5.9939347 9.9991530 7.2013153 10.1285848 5.0419132 11.4277979 4.5292650 4.3665390 10.0258913 5.3214844 8.6313652 9.4463805 9.1545376 9.5238467 1.3004752 12.6610212 1.3004752 10.6441893 NA 8.7475317 4.2073385 8.3502970 7.7660147 13.623664 7.114230 8.577736 11.186717 10.456531 9.505020 5.622377 11.271453 9.360928 11.499507 13.169223 10.968003 9.774661 7.167727 3.000883 7.186145 10.742355 10.6483465 4.3228151 8.8012903 7.3338709 7.2691155 9.7089320 8.6380702 7.1078029 10.6102089 8.1412264 0.6223682 7.8082428 9.2006208 14.0180712 10.6375127 7.8759877 8.3393672 10.9332164 9.2170744 9.2590010 10.2374543 12.0806805 10.9812474 10.4803574 9.3859208 NA 9.5129022 8.3761949 9.3872481 10.8087383 9.0956763 11.0225685 10.7626950 8.2458921 13.0349463 10.4828427 10.4812900 12.7248115 9.8722010 9.9192927 4.3228151 TCGA-D8-A27N 36 0 NA 146 breast stage iiia t2 n2a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 4 white not hispanic or latino 147.48.0 NA NA 1 3 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.621532e-07 1.946798e-07 12.371778904 6.492556639 6.638712479 11.893435478 -0.009989098 10.581266406 -1.595096878 9.751052756 11.581266359 8.059729489 9.721374710 7.518835669 8.370877429 10.001282921 8.129607072 9.370155996 10.406501381 10.125764996 7.589968673 3.405093798 10.473535599 10.268505158 14.167007978 9.960641009 8.729273707 10.804638215 5.814483773 11.180079965 -1.595096878 0.405121035 9.134714060 11.383088586 13.565752513 8.210836909 15.615288902 12.663143893 9.869128343 7.326934567 4.554840534 6.513617071 8.362195456 10.096400494 8.179880236 12.731733364 NA 10.179468503 12.899198765 NA 9.384275426 11.070429111 8.535663802 8.454941628 2.492545424 13.777819202 9.944227714 1.990047220 7.980632581 -0.594878965 4.744941447 9.873208156 10.281993759 9.338046175 10.691939674 9.985351707 10.054798428 6.848036981 10.873462723 10.806239381 5.534376037 7.858364005 2.212444829 10.446752381 14.899292534 8.474717513 10.945221270 10.115469241 8.314986485 1.864532845 3.896949921 7.435760257 9.591826561 10.563071640 0.990083536 7.335830689 7.027145203 8.684703744 11.303505651 7.112452018 6.924729383 6.382373289 9.768680414 11.883230820 4.974946826 13.672757745 4.287738232 6.904939234 11.966858476 13.135032535 12.687168079 7.179880236 10.187272389 11.020033059 10.437755401 10.972336315 4.831360453 8.749389119 13.331157513 9.803836965 -0.009989098 10.358562197 8.896946289 2.311997105 2.205204813 9.376636809 10.100756545 9.507068949 8.259961652 15.107874648 12.859585295 9.432308044 7.786636218 2.212444829 15.055570018 10.505755591 12.896946308 11.393600411 9.544644571 9.520136785 7.833453694 10.337581096 -0.0352350 0.4301700 0.5184900 -0.5559100 1.1254000 0.0277930 0.0176230 -0.0203340 0.0347570 0.0106430 0.0106430 1.3301000 -0.0131860 -0.0131860 0.0063271 2.9580000 -0.5176800 0.3681400 0.0091104 -0.5475600 -0.0018612 0.5045600 2.1081000 3.6569000 3.3768000 -0.1295900 3.4290000 0.3619100 -0.0375490 -0.0352350 0.0120370 0.0117580 -0.5559100 0.0277930 0.0397000 0.0275770 0.0347570 -0.0203340 0.0347570 0.0081358 0.0082750 0.0082750 -0.5730300 -0.5346400 -0.5362400 -0.0145630 -0.0295070 -0.0131860 -0.0131860 0.0063271 -0.5552100 -0.5587100 0.0055612 -0.0495770 -0.5006300 -0.0018612 -0.0293700 -0.0374130 -0.6048100 -0.6028800 -0.5646000 -0.5984200 0.3619100 -0.0375490 0.0179030 0.0235060 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 9.032627097 14.360811222 4.554840534 9.962556976 4.127558997 11.136412252 0.727005550 -1.595096878 8.588728500 7.609664111 -0.009989098 8.587475259 2.653014144 11.108131583 9.362920880 1.990047220 7.048948898 10.000816920 10.420508298 10.858878281 9.913516862 7.922762777 11.354372816 3.614544955 7.837634871 10.054798428 -0.009989098 NA 11.893184374 1.990047220 12.134713964 12.723565409 7.599850374 9.768680414 10.081050232 10.320972557 2.653014144 1.212444829 1.727005550 2.990047220 8.311983940 9.883862864 11.605991825 3.727016445 6.615277977 5.831357919 9.763744356 6.780132901 11.278345027 NA 11.423815022 2.212444829 4.019799751 9.238718563 6.411110961 5.920793488 9.437827794 8.960640864 8.489901734 0.405121035 13.614508492 0.405121035 11.505755542 NA 8.545922821 6.275457819 8.124482199 8.241143736 12.878065 7.742715 8.717976 15.615289 9.735450 10.915857 12.731733 12.111373 8.668362 11.152447 13.297636 9.566225 9.591827 9.706018 2.405094 10.078402 10.671001 11.0287461 7.4765559 8.7008621 8.5899687 7.3852326 10.2962276 7.5057552 8.8166042 9.9606410 6.8271585 2.6530141 4.5750158 8.3077095 11.2621022 10.5611763 7.8949414 10.0552475 9.3966151 6.5548405 9.3380462 10.6473741 10.5624401 9.9853517 10.6748044 8.4065014 0.7270056 9.0765901 6.9825225 6.4819092 11.3035057 8.2395642 10.9682895 9.7686804 7.6295533 13.7130766 10.7054458 9.8271580 12.1151463 10.8709146 9.2669556 2.2124448 TCGA-D8-A27P 64 0 NA 23 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 147.48.0 NA NA 2 4 NA NA 3 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.668684e-07 10.5888918 6.6046748 7.8657611 11.0146844 1.6563133 10.5533971 NA 10.1049405 12.0945800 10.1983725 9.9018607 8.0400124 9.2746933 9.1106073 8.4748903 8.9335954 11.3116150 9.4490983 7.6134101 0.6562675 10.4446184 10.1391159 13.4188457 11.4860307 9.4490983 10.3628040 4.2108953 10.6453369 NA 2.7437735 7.5691971 13.1120204 12.5189453 7.3145198 13.4369502 13.1769880 9.2166409 7.3910176 5.0138597 6.2636392 8.6421499 10.2237888 8.9589468 13.4674819 5.5142896 10.8556736 14.2065737 8.4923584 9.3248117 11.3035415 7.6046748 6.9370783 0.6562675 13.3728863 7.6105044 2.4636748 8.3960884 -0.3437325 3.3001677 10.1044242 10.3145195 10.3454323 11.9440203 10.5282131 10.1126623 2.6563133 11.5747985 10.1259498 6.5450510 8.3480513 6.8461322 11.3463059 14.8087908 8.3410388 11.9889040 11.7679327 8.9635088 0.2412300 2.9042336 8.7264290 9.0825727 11.6864578 NA 5.5870439 7.3497952 8.7075169 11.2320835 8.0204428 5.2108953 4.8851253 10.4290349 11.7122682 0.6562675 13.3190876 5.6897297 7.3251930 12.1850062 12.7826898 12.9710328 7.9759798 10.5492302 11.0893717 10.9668185 11.4856343 5.6220928 8.4523475 12.1103501 11.0893717 1.2412911 10.2256889 8.9440203 4.4376672 3.7063758 10.5877842 10.8712341 10.0746877 9.1670721 14.5617419 10.1857385 9.9160513 8.9680562 4.5632008 16.4927837 9.3251930 13.0280846 12.0386618 10.4215940 9.7945798 8.6661366 10.6974366 -0.00062633 0.56303000 0.56356000 -0.00298090 -0.00298090 -0.00367290 0.00000000 -0.00131910 -0.00367290 -0.00892420 -0.00892420 -0.00892420 0.00352040 0.00589780 0.00284130 0.00284130 0.00284130 -0.00145770 -0.00145770 0.00076001 0.00284130 0.00520280 0.00311900 0.00311900 0.00311900 -0.00034914 -0.00034914 -0.00034914 0.01300100 -0.00062633 -0.00062633 -0.00339610 -0.00298090 -0.00367290 -0.00367290 0.00000000 0.00000000 -0.00131910 -0.00367290 -0.00367290 0.01216400 0.01216400 -0.00892420 0.00395220 0.00395220 0.00395220 0.00395220 0.00589780 0.00589780 0.00284130 0.00284130 -0.00145770 -0.00145770 -0.00145770 0.00076001 0.00284130 0.00520280 -0.59093000 0.00311900 0.00311900 0.02672200 -0.00034914 -0.00034914 0.01300100 0.00034401 0.00561980 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3198658 12.8840743 6.2710185 9.6499540 2.2412605 10.6626340 -1.3437325 1.9782322 8.4970858 8.1720079 2.2412605 7.8889685 0.9782689 9.9816134 9.1857385 0.2412300 6.7700507 9.7020676 12.0483570 10.5033652 9.9860762 8.2356237 10.8180697 2.2412605 9.4596318 10.1126623 3.4111957 -1.3437325 10.0378508 3.6104993 12.7079417 12.2822450 7.3739840 10.3739844 6.6842142 9.0550516 4.4376672 0.9782689 0.6562675 2.9042336 9.0898935 9.3046655 10.7341251 4.0138642 8.8967296 6.4111957 10.3973535 6.8559797 9.6428611 -1.3437325 13.3413852 2.6563133 4.4891961 9.5683740 6.1772800 3.7855924 8.9195773 7.2673326 6.6897311 -0.3437325 13.6848184 NA 9.9765444 NA 8.6119580 5.4111957 8.0356860 9.0302605 13.8049779 4.2412682 8.8111261 13.4369502 10.3313829 10.8019217 13.4674819 12.1405015 9.3520668 11.0278124 13.0897630 8.7530232 9.0825727 9.3322649 0.6562675 7.8161792 11.6717230 11.1764355 7.0365088 8.9657843 9.2792749 8.1232611 10.5503639 5.7543397 6.1561539 11.4860307 6.2337366 4.4111957 6.9872254 5.5641586 12.2169990 10.3645296 8.3752002 8.2261636 13.6350631 5.1641024 10.3454323 10.2214100 11.5740530 9.8028766 10.7240784 9.5654509 NA 9.3988448 8.3595712 5.1641024 11.2320835 6.7223977 11.0299887 10.4290349 7.4923580 13.8325512 10.0329759 10.7037727 12.9165659 10.3449953 10.1616233 0.6562675 TCGA-D8-A27R 41 0 NA 307 breast stage iiic t2 n3a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 11 white not hispanic or latino 147.48.0 NA NA 1 4 NA NA 1 2 2 2 5 2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 8.343418e-08 12.5261108 7.5171757 5.1425401 11.6072999 -0.8688056 9.1865956 NA 9.3155687 11.0103221 7.8945256 10.0124272 7.0679516 9.4938050 10.1733145 6.2605959 8.6762776 9.6719256 9.9669690 6.5948381 5.1647380 10.3205201 10.6264188 14.4762506 11.0413938 8.8936953 10.9653892 6.5407046 10.7937591 3.8592341 0.4532278 8.4155588 10.5667231 12.9556754 8.4644686 12.9695323 12.9851588 9.2214257 5.8386720 2.5907457 7.9061005 8.6321551 7.0590913 6.6430654 12.2295098 2.5236372 9.6661024 13.6448558 5.4259326 9.3503607 11.7251712 7.4577428 6.8727808 -0.2836675 13.1074768 9.3236061 2.9386622 8.3732963 -1.8688056 4.0620526 9.3383275 10.4504208 9.5209445 9.2612403 9.0382038 9.6830214 3.1313096 10.6719256 10.3945824 5.0620526 6.7312267 8.5225568 9.2253909 14.1731435 7.9912361 10.5630720 11.0836905 7.7533652 1.1313261 3.4888620 8.2081290 8.6868612 9.7354030 -1.8688056 5.2187773 7.7423377 9.8828573 10.4833567 6.2759718 6.0016784 5.4800421 9.9374600 11.6803759 6.8178138 13.4698407 7.1674864 7.0590913 11.3397000 13.2173250 12.4464628 8.5407042 11.5311252 10.7803448 10.1688877 10.7214324 4.3601325 9.6494746 11.4483018 8.5343255 -0.8688056 10.6721678 9.8689832 0.4532278 3.0458798 9.2273695 10.1362359 9.8006413 9.7478620 16.2164226 10.9740564 10.5496929 7.5407038 3.7460225 16.1819962 5.4167148 11.9596481 11.2319756 10.5716633 8.9752344 7.9208471 10.0717663 0.235920 0.226630 0.404440 0.293900 0.222370 0.200910 -0.340670 0.200300 -0.353500 2.946100 0.482510 1.407900 0.227920 0.000000 0.214380 0.851850 0.245750 0.217140 1.341500 0.173020 0.221290 0.153670 -0.340440 0.384190 0.502210 -0.147980 -0.147980 1.191900 0.806940 -0.073209 -0.357380 -0.354420 -0.358740 0.200910 0.200910 -0.321240 -0.052801 0.220060 -0.353500 -0.353500 -0.051451 -0.059000 -0.356700 -0.353730 -0.353730 -0.346300 -0.341250 0.000000 0.000000 -0.352480 -0.335140 0.217140 0.214680 0.214680 -0.334330 -0.346300 0.153670 0.072684 -0.340440 0.502210 -0.158480 -0.147980 -0.147980 -0.361020 -0.055364 -0.057654 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 0.000 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 0.000 8.8836938 12.5501541 6.1199973 9.5438831 2.5522049 10.4811473 2.4532542 0.1313261 8.9028026 5.7162749 -1.8688056 7.6331507 3.5575816 11.4224839 9.1987475 6.4532410 8.1592195 8.9602429 7.5385808 10.5999373 9.3372776 8.0738277 9.9458957 2.7751770 6.9892946 9.6830214 3.6859065 NA 10.9089795 0.7162447 12.3380987 12.7623197 7.4844604 10.1246055 8.7265707 9.9716977 5.1647380 2.0381903 -0.2836675 5.8386720 8.3309854 9.5742567 8.9474970 5.3012364 9.9360534 8.1757072 10.2395109 6.6029883 10.4132433 -1.8688056 9.8173759 2.5236372 3.6231645 9.4613002 5.6963778 4.9386669 9.0782194 9.4683776 9.2385304 -1.8688056 13.7605845 2.0381903 11.1950454 NA 9.0672149 5.3012364 10.0460721 8.8421196 13.838275 8.156453 8.520407 12.969532 10.095448 11.184051 12.229510 11.755423 9.432038 10.658504 12.528386 12.266221 8.686861 9.245055 1.716289 8.327301 13.623886 10.592793 4.886199 9.242449 9.654385 9.220101 9.639261 6.896185 9.704960 11.041394 6.886200 2.523637 5.001676 8.576111 9.871516 9.814747 9.057609 8.281060 9.736793 6.020055 9.520945 10.040456 11.109487 9.752907 10.086600 8.438514 4.701166 8.986213 6.234601 6.678207 10.483357 5.453241 10.281378 9.937460 7.296221 13.369046 10.654385 9.842980 12.400367 10.311533 9.245055 1.590722 TCGA-D8-A27T 53 0 NA 398 breast stage iiic t2 n3a m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma no 12 white not hispanic or latino 147.48.0 NA NA 2 2 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.112456e-07 11.228103177 8.237447562 6.919477146 11.065266539 1.992695932 10.763901591 0.729618025 10.117239454 12.025995545 10.710363658 9.200515143 7.795742276 9.531199552 9.658615309 6.516250007 9.278859906 9.899076817 9.764726816 7.923424355 4.946885226 10.371343335 10.068166413 8.884470935 11.644486420 9.863051976 10.591360116 6.636543421 10.591040651 -1.592484088 2.800040496 9.098595888 10.998779533 13.110654974 8.407724935 13.270313696 13.502915719 9.537007709 7.966145490 5.825577042 7.182511552 8.064149400 8.718337650 8.590119174 12.903205085 3.265706926 10.935446119 14.115946499 5.314616776 9.299508434 10.408428996 8.239031841 8.396409555 -1.592484088 14.668080732 10.087204910 3.108156418 8.425925010 -1.592484088 5.080150243 10.204575546 10.218296346 7.909561916 12.084232856 9.776231173 9.939106221 0.407733431 11.897948891 10.396764453 7.003914757 8.294945548 -0.592266569 11.041174111 14.518473133 8.512009154 11.259668950 11.215683389 8.620829038 2.495183478 NA 8.417553399 9.168444728 11.832284770 -0.592266569 5.791428607 7.460292880 10.689075295 11.141375694 6.996439592 6.825577042 5.495186677 10.471456863 12.004846189 -0.007376571 13.574790040 6.367727501 7.524068379 12.163133981 13.621398603 12.769942592 8.548554532 10.119821860 11.181276142 10.755063737 11.253214794 5.373509016 8.516249219 12.120574143 11.028631860 0.407733431 10.387150008 9.069502936 1.729661526 2.871094514 9.599400929 10.504110473 10.295326188 9.187444126 14.588449809 9.768571914 9.868692475 9.062360824 2.655649497 15.813705498 10.055183179 13.382184167 11.843264821 10.127113609 9.488542323 8.582650459 10.378909090 -0.263960 0.332050 0.349410 0.048404 0.048404 -0.558370 0.052241 0.035734 -0.576640 0.030591 0.030591 0.030591 -0.275590 -0.275590 0.018803 0.018803 0.018803 0.049966 0.049966 -0.219970 -0.190110 -0.010508 0.610090 0.638100 -0.592050 0.000000 0.000000 0.000000 0.013632 -0.301920 -0.263960 -0.255970 0.048404 -0.579850 -0.565330 0.051530 0.051530 0.035734 -0.576640 -0.613160 0.045566 0.045050 0.030591 0.037924 0.037924 0.037924 0.037924 -0.275590 -0.275590 0.018803 0.018803 0.049966 -0.587160 -0.615660 -0.219970 -0.190110 -0.010508 -0.601970 -1.258400 -0.616710 0.033972 0.000000 0.000000 0.013632 -0.271880 -0.264560 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 -0.264 0.068 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.558 -0.558 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 -0.264 0.068 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.558 -0.558 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 9.7313425 13.7626284 8.8804155 10.4307860 3.2150728 10.0578790 2.4077334 1.2150573 8.7419981 9.1219704 NA 8.2289567 3.6171809 9.7436733 9.4210474 0.7296180 9.7069328 9.1012117 10.3546310 8.7586640 9.1872882 8.1150837 10.6392460 3.2150728 8.3720658 9.9391062 4.1626129 -1.5924841 10.0739487 1.9926959 13.3546310 12.2311915 7.9449433 9.6954371 10.1816881 9.1373455 6.3560927 1.5776343 1.5776343 5.8339906 8.4938611 9.4684206 9.9090644 6.2021415 7.5937399 5.3502391 9.5292584 6.0224344 8.8905327 NA 11.1239012 3.8995817 4.1626129 9.8496885 5.8933938 5.2903691 9.8439157 8.9908074 7.3677266 NA 13.9588021 0.9926959 10.2765474 NA 8.7126463 4.6931245 8.0659363 8.7149255 13.588933 5.065934 7.526666 13.270314 10.294797 10.524069 12.903205 12.652683 9.554293 11.233280 13.295707 10.985626 9.168445 9.133943 1.215057 6.919477 11.679480 11.631274 6.567596 8.775139 8.614739 8.421745 10.839909 7.497837 7.933246 11.644486 7.007637 5.253214 6.396410 7.564592 10.700334 10.421047 8.399247 8.874311 12.235067 6.871249 7.909562 10.612907 10.641045 10.104258 10.888515 9.566334 NA 9.578532 8.797539 6.854809 11.141376 8.593839 10.733592 10.471457 7.320614 14.099305 10.071283 10.487876 12.982200 10.772407 9.537008 2.867165 TCGA-D8-A27V 62 0 NA 381 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 155.46.0 NA NA 3 2 NA NA 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.3942e-06 1.19589e-06 10.54265534 9.33204774 7.84727788 11.63697506 1.83406394 10.56019658 0.33159058 10.76028741 11.92450241 7.60304099 8.95240900 7.96820310 9.05666047 9.98412448 6.17288150 9.01164463 10.71384202 9.53533409 7.70081214 1.55395024 9.77037004 9.40438076 12.52720679 10.51086532 9.16235759 10.52119692 5.18955971 10.38324042 0.06860203 1.91655308 8.16024356 11.83200522 12.54584678 7.42961011 12.22310885 14.61963925 8.24147127 7.03893764 3.99454352 6.99691407 8.51893046 9.05153742 7.62159697 13.36838149 1.06853324 9.76063629 12.76542448 4.50150284 9.19554249 10.92060512 7.13247814 8.47368546 NA 13.89978439 9.24596335 1.91655308 8.10855948 -1.25325728 5.73530012 10.09589700 10.39137335 10.34024035 12.20617546 11.23131282 9.22891944 2.79100135 11.65397593 10.34164013 7.65500829 7.47112973 -0.66840942 12.11689448 13.92953381 9.27797778 11.50421413 10.86003234 9.04123641 0.55395024 -1.25325728 7.14962824 9.54953595 12.45898155 NA 5.15600822 6.76620688 9.79952335 10.88872286 5.84464677 5.29351027 3.36131920 9.80832439 11.97227510 2.65349574 13.43199422 4.17287950 7.58424398 11.94429321 11.72049245 13.09205567 7.02970465 10.34745782 10.93118124 10.78313969 11.57851676 5.08646534 8.39047208 11.91826170 11.34443557 -0.66840942 9.51065796 9.52797541 2.06853324 3.33936546 9.73636506 10.59758387 10.51438643 8.41106307 14.22106638 9.41550074 10.44597132 8.37323755 4.15600822 15.94299216 10.33907279 12.89270707 12.40672312 9.99572928 9.29206298 8.80460765 10.52162929 1.02700000 1.12730000 1.14330000 -0.00995650 -0.01243800 -0.02197200 0.59314000 0.56863000 0.56863000 0.66826000 0.66826000 0.66826000 -0.00221680 -0.00221680 0.00027728 0.00027728 -0.63049000 -0.02082400 0.57523000 -0.02068700 -0.00995650 0.00420850 -0.00622860 -0.57970000 1.65860000 0.01153900 0.59836000 0.59836000 0.01750200 0.00499690 -0.04183800 0.00000000 -0.00995650 0.04202400 -0.01519100 0.59314000 0.59314000 0.56863000 0.56863000 0.56863000 -0.01890200 -0.02252600 0.66826000 0.59440000 0.10994000 0.59629000 0.67104000 -0.00221680 -0.00221680 0.00027728 -0.63049000 -0.00539920 -0.63604000 -0.61412000 -0.61633000 -0.00995650 0.00996230 -0.62303000 -0.00622860 -0.57970000 -0.01780300 0.01153900 0.59836000 0.01750200 -0.00443120 0.03284500 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 0.000 0.000 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 0.000 0.000 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 9.7710629 11.6811360 6.9014341 9.1644683 2.8191572 11.2867438 -0.6684094 3.0685504 7.8499036 10.3090967 -1.2532573 7.9631556 4.3759708 9.8538329 9.2925455 -1.2532573 10.1565371 9.4409736 12.3081424 8.9850205 9.2915561 8.7037178 9.6680849 2.7008170 9.2238680 9.2289194 5.8603570 NA 10.4645063 3.2384659 12.1829369 11.7446772 8.4313643 10.6988110 8.6391587 9.4960662 7.1281583 -0.6684094 1.8340639 2.2701701 8.1378595 8.0786525 10.5044225 5.9265237 5.6781226 4.7689835 10.3679809 7.1194807 8.9039626 -2.2536012 11.4452119 3.3904751 4.0133997 9.8060852 4.7972257 2.7008170 9.4715559 10.0087106 5.0227406 0.9165531 14.2269011 1.9165531 9.8184133 NA 7.7648159 5.2857758 8.1151222 8.5015032 12.971520 4.641436 8.489767 12.223109 10.518724 10.973630 13.368381 13.018298 8.559218 10.981732 13.024775 9.681412 9.549536 9.770717 2.553975 8.688397 10.872675 11.23257083 6.92652491 9.04525128 8.57395841 7.36500133 10.95027885 6.00871097 7.56199890 10.51086532 4.86555760 2.39047509 7.96578428 6.20531040 11.56359937 11.00988494 8.43224080 7.64597251 13.23655778 5.68913140 10.34024035 10.70589326 11.69826476 9.89031779 11.09243679 9.47198201 0.06860203 8.32905900 8.25604447 4.22234862 10.88872286 3.17288750 10.86512862 9.80832439 7.81001116 14.05164364 10.38979555 10.39654549 12.01902685 10.04353193 10.30933515 0.06860203 TCGA-D8-A27W 55 0 NA 373 breast stage iiib t4b n0 m0 2-10-2014 female 2011 NA NA mucinous carcinoma no 0 white not hispanic or latino 147.48.0 NA NA 1 3 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 5.562279e-08 12.9891376 6.3698050 5.9618849 12.4271779 0.5581697 10.1089093 0.9732072 10.5241871 11.7019708 7.6170560 9.8233868 6.6242515 9.2294086 9.2080173 5.6170575 8.9604639 10.6105041 10.3926335 6.8588961 3.2211347 8.8381598 9.7180338 15.3920820 11.2564330 9.1146684 11.3374714 5.8060894 10.1734703 0.7805621 -2.0267928 8.4161435 10.7837716 12.5460186 8.8497169 13.3369925 13.0421881 9.1475016 6.4036529 3.5879050 8.8029228 8.5440042 8.5731128 6.9816289 13.1616343 -1.0267928 9.5684574 13.1508531 1.4326388 9.6084646 11.5838788 6.7869805 9.4020835 -0.4418303 12.9144998 11.0286519 2.8311881 9.1887330 0.5581697 6.0500162 9.5263492 10.2539707 9.5459002 9.3660540 9.3395222 9.7993511 1.6736469 11.5764785 10.6195336 4.6874471 6.9844276 12.5029965 10.0453325 14.3635872 7.7200164 11.5814548 12.2133205 7.7112925 3.1431322 6.3307520 8.5591013 9.2394009 10.6202086 0.5581697 5.5045823 7.8202575 10.1409317 10.5833020 7.9886148 6.5006762 5.2305873 10.8708563 11.7395218 6.9244847 13.6911708 5.1229460 7.1531091 11.1175395 10.9253952 12.8013860 9.2211274 9.5553418 10.9458208 10.3651308 10.9986856 4.9844253 8.9816286 11.6413093 12.4176325 -2.0267928 10.0649658 10.2637949 0.5581697 1.9732072 9.7537397 10.2792616 10.3138846 9.5138123 15.1543910 10.7849760 11.1597785 5.8680175 4.0606613 16.3572754 6.4244115 11.3750128 10.6889474 9.6264928 8.5335326 8.5712524 10.2648196 -0.2366700 0.4461200 0.5713000 -0.0396650 -0.0396650 0.3236600 0.2325100 0.0087528 -0.5851000 2.4772000 0.0592230 2.3085000 -0.0927420 -0.0927420 -0.2477800 1.4613000 -0.3075700 0.4454500 0.4454500 0.1081800 0.4582000 -0.0550950 -0.0977190 0.9371200 0.9371200 0.3782500 0.7372000 0.7372000 0.8184500 -0.2366700 -0.2366700 -0.6594700 -0.0396650 0.3236600 0.3236600 0.2325100 0.2325100 0.0087528 -0.5851000 -0.5851000 -0.0927420 -0.0927420 -0.4972600 -0.2931300 -0.2931300 -0.2931300 -0.2931300 -0.0927420 -0.0927420 -0.2477800 -0.2967400 0.4454500 0.4454500 0.0000000 0.1081800 0.4582000 -0.0890370 0.4151300 -0.0945920 0.9371200 0.0576530 -0.3886200 0.7372000 0.8184500 -0.2552700 0.2443500 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 -0.080 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 -0.260 -0.293 -0.293 0.120 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 -0.080 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 -0.260 -0.293 -0.293 0.120 9.0024871 12.0067090 4.7011221 9.2764099 2.7805621 10.3778093 1.7805621 NA 8.0566794 8.1630247 2.4967691 7.6906706 4.3825912 11.0835201 9.3102642 4.5277898 7.4182144 10.6188583 10.9540536 10.9627718 9.9043363 8.3074732 10.6157030 3.1826605 10.6392019 9.7993511 3.0606700 3.4326254 10.9781226 1.1431322 12.3654503 12.5320989 7.5525162 10.2080174 8.0433210 10.8687753 6.3698050 2.7805621 NA 5.0606613 8.4800033 9.0626504 10.0918166 4.0606613 7.5089420 6.5989086 10.6671225 6.9703797 10.7600821 -2.0267928 9.4509582 5.1531081 4.1826526 9.2347719 4.9106607 7.9647221 8.4987208 8.8920631 11.7331921 NA 13.7566331 0.2951352 11.3456569 NA 8.8527832 4.4967627 7.9788243 9.0439919 14.633937 6.864983 9.183262 13.336992 10.236763 10.886650 13.161634 12.974344 9.116583 11.927029 12.303557 12.168265 9.239401 9.686586 2.880098 7.988615 12.236249 10.753535 8.928850 8.068597 9.736827 9.858134 9.667993 6.714667 10.086291 11.256433 6.138106 3.182661 6.244663 8.972495 11.570089 9.563787 9.526800 8.752098 12.206370 7.912779 9.545900 10.275268 10.464301 9.853931 10.478763 9.818690 6.523946 8.553308 6.861304 8.401560 10.583302 7.017595 10.530185 10.870856 7.507016 13.396513 10.435702 9.842794 12.734959 9.589749 9.087593 3.432625 TCGA-D8-A3Z5 54 0 NA 441 breast stage iiic t2 n3a m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 19 white not hispanic or latino 255.29.0 NA NA 2 2 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 1.946798e-07 10.58083431 8.41042888 7.07255925 11.87535311 4.88614528 9.87939379 NA 9.03004248 11.73811063 10.71728965 9.65873579 8.60433454 9.72860489 10.91208134 7.58530961 8.63919019 11.27708110 8.65752175 7.60055002 1.25053719 11.97689748 10.65296074 11.55123707 11.52135354 9.07892093 10.18551214 5.99779144 9.85788803 1.02814477 2.25056751 7.63549540 12.55849031 12.72012682 7.56732412 13.97671500 13.54189286 10.13363737 7.77411958 5.71932584 7.58530961 8.53331532 9.82420491 8.54255058 12.95254479 4.39739911 10.80075473 13.89322187 7.93905787 10.16158151 10.62373356 9.79965480 5.65265571 NA 13.81253871 9.01590312 0.02814477 7.96283876 0.44318227 5.79193125 9.72629106 9.40682129 9.69113020 10.46001104 9.74355536 10.10141424 1.76511036 11.38535068 11.22271691 8.14537533 7.94702847 9.26656989 11.88536872 14.43266378 8.21907653 11.08480294 10.32928037 7.62559708 1.76511036 4.39739911 7.92701879 8.37836769 11.42334233 -1.55681773 1.44318227 8.02628551 9.19139560 10.05007065 5.77412024 4.44320216 3.44320879 9.39083962 11.79882915 1.61310727 13.08925513 5.86946676 7.14364239 11.95050188 13.10681645 12.45905335 8.60054964 10.78527745 10.28122485 10.48349244 11.44443501 4.85259318 9.46764997 11.17197363 12.98163422 0.44318227 10.41510551 8.30273761 1.44318227 4.91893477 9.12268281 10.69675484 9.90876908 8.84087735 14.34260688 10.48246453 8.77187766 9.39229982 4.39739911 15.07540280 10.36578712 13.91246299 12.11396962 10.60842385 10.46175067 8.11031417 11.25068445 0.00221930 0.80694000 0.80694000 -0.00622860 -0.00622860 -0.00609040 -0.00443120 -0.02411400 -0.02411400 0.00000000 0.00000000 0.00000000 0.00277450 0.00277450 0.00110930 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00576050 -0.00152430 0.01126100 0.00583090 0.00583090 0.00583090 0.01014600 0.01014600 0.01014600 0.01251600 0.00221930 0.00221930 -0.00396890 -0.00622860 -0.00609040 -0.00609040 -0.00443120 -0.00802340 -0.02411400 -0.02411400 -0.02411400 0.40294000 0.39197000 0.00000000 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00277450 0.00277450 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00512270 -0.00576050 -0.00152430 0.00875170 -0.44340000 0.00583090 0.00583090 0.00360760 0.01014600 0.01014600 0.01251600 0.00263570 -0.40013000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 8.57248575 11.86605595 2.44320879 10.45128118 2.59943682 11.18023882 1.90265247 3.39739227 9.62683809 9.25457751 -1.55681773 7.92903229 6.02063110 9.10052122 10.02063165 2.90263318 8.95297765 9.45722326 9.99298746 10.26855908 9.74178094 7.60307438 11.40103031 2.76513158 10.38864655 10.10141424 5.91893716 0.76511036 10.61594278 4.85259318 13.45373086 12.16162861 7.92500248 9.92802560 7.72860489 9.32355157 5.64287482 1.76511036 0.02814477 3.35008701 9.52135349 10.25658317 10.00401325 6.94702905 9.04559532 8.26657012 10.49509142 4.85259318 9.40320465 -0.55681773 11.85113436 3.08705543 5.19808942 9.52442653 6.87770622 5.82690689 9.77859315 8.07801361 9.71990882 0.02814477 13.96685659 -0.55681773 10.52302084 NA 7.80075498 6.55694435 6.72397351 8.34255963 12.449047 3.691132 8.167717 13.976715 10.174097 10.323934 12.952545 12.672322 8.986911 10.278858 12.830412 11.812800 8.378368 7.468342 1.250537 7.434725 11.178124 11.2331439 5.7005895 8.6635691 9.5935848 7.1880369 10.8635499 6.3857175 8.3181840 11.5213535 5.6816067 1.4431823 8.9509973 6.3338316 11.3338471 10.5588967 7.8440824 9.6708187 11.5789120 7.9784782 9.6911302 10.6268382 11.5280111 10.9161474 10.7257120 8.4821218 NA 9.9282169 6.2089366 8.0486825 10.0500707 4.6330301 11.4920302 9.3908396 7.5621440 14.0781272 10.0025799 10.2569840 12.5853098 11.2505577 10.4704176 0.4431823 TCGA-D8-A3Z6 56 0 NA 563 breast stage iiic t3 n3a m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 19 white not hispanic or latino 239.28.0 NA NA 2 2 NA NA 1 4 3 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.946798e-07 10.72032156 5.84967657 7.14846845 11.38017169 2.09068409 9.60091643 NA 8.80809765 11.88959267 12.62356512 9.95391807 8.32393565 8.56890995 9.73120785 7.69402560 8.74007924 10.66083238 9.17569749 7.31802303 -0.02473668 11.61951448 10.88684923 9.30463014 10.61394514 8.74118415 10.09674111 4.14513125 9.67680283 -1.60955242 2.19761381 6.72563483 11.88397544 12.19850539 6.08373247 12.97168103 12.51460871 9.69630669 5.84967657 3.24823121 6.33275984 8.03770343 9.00679395 7.75218861 12.63014185 2.63816654 10.21480601 13.37314950 6.66636889 10.06040561 11.03387577 4.86597818 9.24822599 NA 15.31326257 10.65849464 1.19761381 8.26676218 -1.60955242 5.42366892 9.77772397 9.88159717 10.43498062 10.15594550 9.80175604 10.23730235 4.29713271 10.88809686 10.48267185 7.87002558 8.67449067 -1.60955242 11.05513673 15.09122653 9.60599650 11.07696440 10.48432275 7.38742458 2.09068409 2.71217755 7.68716149 7.65234021 12.03893966 NA 5.18466115 7.85785040 8.61062330 9.27974892 9.17814768 5.01959962 4.11816866 9.98783202 11.49893285 4.06267436 13.26680995 6.31505715 6.95248733 12.01789290 13.33902290 12.44967400 8.76419784 10.82069762 9.93569222 9.92546202 10.90471251 3.97520828 9.52979635 11.30088778 11.66971053 -1.60955242 10.16585530 8.27135891 0.71219956 4.27288914 9.57263941 10.89680056 9.52851682 8.76202153 14.80742179 9.87103520 9.10105147 9.63103642 2.84967907 16.29935292 9.94051079 13.71516390 11.36895552 10.05157779 10.02505607 7.82278686 10.75075471 -0.01257600 1.08630000 1.09530000 -0.00733390 -0.00733390 -0.00401620 -0.01028000 -0.01395300 -0.01697900 -0.60274000 -0.60274000 0.56650000 0.55726000 0.00083195 0.00000000 0.00000000 0.00000000 0.27033000 0.25103000 -0.00443120 0.56596000 0.00000000 -0.01023200 -0.01023200 -0.01023200 -0.00733390 -0.00733390 -0.01807800 0.00404240 0.00263570 -0.01257600 -0.00664320 -0.00733390 0.01978300 0.00083195 -0.01028000 -0.01565200 -0.01395300 -0.01697900 -0.01697900 0.56507000 -0.02274400 -0.60274000 0.33500000 0.33500000 0.33500000 0.34080000 -0.91364000 0.57273000 0.00000000 0.00000000 0.27033000 0.26137000 0.26137000 -0.00443120 0.56596000 0.00000000 -0.58951000 -0.01023200 -0.01023200 -0.29331000 -0.00733390 -0.01807800 0.00135520 -0.00227570 0.01251600 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 -0.015 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 -0.015 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 8.2497800 13.5452213 5.5399932 10.4489133 1.0061185 10.2004150 1.3902274 NA 9.3767983 8.2805091 -1.6095524 7.0607953 1.7121555 9.8900910 9.6088083 1.5601769 7.6334189 9.0662020 10.5769783 11.0784954 9.7726854 7.0662022 11.5278766 1.9751899 9.2590677 10.2373024 4.4563331 1.1976138 10.7247977 2.0906841 12.4686461 12.3850404 7.7211621 9.4098358 9.4188418 9.6268572 5.5501157 0.9751899 0.3902274 1.1976138 9.1096338 10.4740567 10.2644580 3.3902412 9.0085754 8.3603511 10.3375167 6.1249546 9.8841004 NA 10.9676738 3.0906841 4.7652854 9.4986715 6.9208459 4.3675248 9.4434921 7.2482265 10.5333093 -0.6097726 13.4403488 2.0906841 10.2036254 NA 6.6045636 6.0484564 6.9714458 9.0493490 12.898705 4.367525 8.536177 12.971681 9.958201 10.664623 12.630142 12.243750 9.150641 10.402870 13.270020 9.043986 7.652340 8.263689 2.090684 7.338612 10.748896 11.4325884 7.9255206 8.3195032 9.2682959 7.7008579 10.8124990 6.7825619 8.7543798 10.6139451 6.9638925 4.5601708 6.8248735 6.3078565 10.8414562 10.5007284 8.1198656 9.3831833 10.8305951 5.1451312 10.4349806 10.9759118 10.9551090 10.6988685 10.8943192 8.6744907 1.7121555 9.9181814 7.8586450 5.4987710 9.2797489 7.1484684 11.2316128 9.9878320 7.0591303 12.7502691 10.1629719 10.3455317 12.9725047 10.6529271 9.6003075 0.7121996 TCGA-D8-A4Z1 68 0 NA 223 breast stage ia t1c n0 m0 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 1.668684e-07 11.18976311 8.96557335 7.20772012 11.70468499 3.79267839 10.31391969 0.62274298 9.52663969 11.82345207 10.82814378 9.89732999 7.96853260 9.44187248 9.67351332 7.60384959 9.21272083 11.34014859 9.71463379 8.56135707 2.20770548 11.88954431 11.23101256 13.09680166 11.06328094 9.45142317 10.56037678 6.41283402 10.25756888 1.03780390 3.35971794 8.59812808 12.92120225 12.71529470 7.66715200 13.33750413 12.68244022 10.49055128 7.35520748 3.68165166 7.68525339 8.91123947 11.33700327 8.48487847 12.33413795 4.99199341 10.75032227 13.30201792 6.96853317 9.80982937 11.05460357 7.85477864 4.89577762 NA 14.05416962 11.26089196 2.20770548 8.94468600 1.03780390 5.08218737 10.10388444 9.74687906 9.54954789 11.82365639 10.20521337 10.52513287 3.28572771 11.42446614 10.86036608 7.69957315 7.28572309 12.66293331 11.33327725 15.07604984 8.43645337 11.29134731 10.97590456 7.47658745 3.12525434 4.03779511 8.63584760 8.61899586 12.44094047 NA 3.84514878 7.42149935 9.74774068 10.68300336 7.93866218 6.24724777 4.12525434 10.14239404 11.87424018 0.03773363 13.13146041 6.08218950 7.60384959 12.42782985 11.67101759 12.86880554 7.88328539 10.58131047 10.63071943 10.76666390 11.46563186 4.99199341 9.11193663 11.33126692 12.08849420 NA 10.39973902 8.71551487 1.84514878 4.42080575 9.85797415 10.65388459 10.20897210 8.79934639 14.30406939 10.37262720 9.28215899 9.04622392 5.24724777 15.18537783 9.26661392 13.69795833 12.60111073 10.25150703 9.84273297 8.06016306 10.25397119 0.00708260 0.00708260 0.00708260 -0.00401620 -0.00401620 -0.00263220 0.01363200 -0.00235530 -0.00235530 -0.02831700 -0.02831700 0.31785000 0.00055459 0.00055459 0.00263570 0.00263570 0.00263570 0.00138680 0.00138680 -0.00332430 0.00097064 -0.00470790 0.00527490 0.00527490 0.00527490 0.00485790 0.00485790 0.00485790 0.00402430 0.00708260 0.00708260 -0.00207840 -0.00401620 -0.00263220 -0.00595220 0.01007900 0.01265500 0.00485790 -0.00235530 -0.00235530 -0.00290910 -0.00290910 -0.02831700 0.00000000 0.00000000 0.00000000 0.00000000 0.00055459 0.00055459 0.00263570 0.00263570 0.00138680 0.00138680 0.00138680 -0.00332430 0.00097064 -0.00470790 -0.10368000 0.00527490 0.00527490 0.00055459 0.00485790 0.00485790 0.00402430 -0.00526100 0.00666530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2892777 12.3233420 6.0821895 10.6543441 3.6070462 10.8523777 4.1252543 3.0378039 8.8467594 9.1989273 -0.9621258 8.1351690 3.8957776 9.2690165 9.8809311 0.6227430 10.2815643 9.6816515 10.6208781 10.3715096 10.1460648 7.7207901 11.5507826 2.4972291 10.0293170 10.5251329 5.3953473 NA 10.7571841 5.4640605 12.5716117 12.1245950 8.4661556 10.2648094 8.2077201 9.2239095 5.9803087 -0.9621258 NA 2.3597179 8.9977971 9.5740425 9.6861528 6.0150760 9.7920649 7.1463202 10.2350120 5.2666142 9.6816515 -0.9621258 12.3448537 3.8957776 5.7792623 9.2747064 5.8472102 5.8451513 9.8183350 8.6616769 9.7563281 NA 13.4639290 -0.9621258 10.6784921 NA 7.8386953 6.7312824 7.8451500 9.0930776 12.3728143 4.1252543 8.8547790 13.3375041 10.3647865 10.0746557 12.3341379 12.2702162 9.0559955 10.5276433 12.8057728 11.2426720 8.6189959 7.4972267 -0.9621258 7.9265385 10.8455527 11.397819 6.187542 9.023637 9.002136 7.541621 10.536440 7.656181 8.135827 11.063281 6.412834 1.037804 7.848367 6.332692 11.941112 10.307506 8.297539 9.007901 11.209285 6.799346 9.549548 10.363101 11.612152 10.959636 10.671699 8.760603 1.037804 9.882760 8.201797 6.968533 10.683003 5.207721 11.414735 10.142394 7.114611 14.009249 9.883285 10.436539 12.732697 10.815051 10.144358 2.359718 TCGA-E2-A105 79 0 NA 1308 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 80.55.0 3 1 1 3 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.318231e-06 3.469029e-07 11.43343162 4.16580745 8.08126132 11.47885388 0.35850879 10.15571015 -0.05664124 9.64732009 11.88605315 7.16902604 10.15002382 6.49800508 9.21098347 9.52837890 8.25932098 7.93020687 10.56546828 10.86327295 6.13324087 1.16581549 11.94024300 8.40284793 14.08350064 10.79620602 9.27507993 11.16621136 3.52838378 10.65422294 NA 1.16581549 6.44060344 11.08424621 13.50215605 5.34713766 13.22181752 13.55020721 8.81069533 6.27134350 2.44591206 5.27731902 8.78890655 11.02312343 7.03087897 13.49243901 0.35850879 8.71600591 13.94795882 2.26534687 9.47548661 11.83848679 8.82809585 3.60638300 -1.64160374 12.45726577 10.67897252 2.16581549 6.12663840 -1.64160374 2.05890523 9.69774724 9.91496000 9.02290123 10.37700192 10.01621897 8.78890655 -0.05664124 10.95161162 10.31046714 6.44060344 6.60638152 12.18807763 11.92641005 13.66369636 8.81620417 9.41914994 11.72818762 6.55812679 1.81786880 6.66679351 8.79203931 8.78681425 10.12332554 -1.64160374 4.71600865 7.20394405 11.63777438 11.17103240 8.57398681 4.60638300 4.19134156 10.32315578 12.62743450 6.40284835 13.46538490 6.86228028 7.73349332 11.94012534 12.09971028 12.99903785 8.21332249 10.95277859 11.05019748 10.88036840 10.24833820 4.05889657 8.77525141 12.33152348 11.19015709 -1.64160374 10.24909828 8.92830962 -0.05664124 4.94341503 9.18182113 10.56088391 10.66451564 9.49159619 15.24902701 11.13796812 11.66935073 8.97224346 0.94343378 15.42838639 4.91304258 11.38670540 10.74674036 10.46632490 9.72532263 8.20237511 10.12431598 -0.01108900 -0.00556710 -0.00903040 -0.00833000 -0.00833000 0.00066359 0.00621830 0.00635740 0.00094096 3.65690000 0.00330020 2.98180000 -0.73707000 0.00120660 0.00816610 3.12720000 -0.72021000 0.00427240 -0.00639640 0.00296530 -0.00058553 0.00038626 -0.72846000 0.65678000 1.27180000 -0.01246700 -0.01246700 -0.01246700 1.43660000 -0.01108900 -0.00556710 -0.00293870 -0.00833000 0.00066359 0.00066359 0.00621830 0.00621830 0.00635740 0.00094096 0.00094096 -0.73733000 -0.02975000 -0.73874000 0.00872300 0.00872300 0.00000000 0.00000000 0.00120660 0.00552310 0.00816610 -0.72562000 0.00427240 0.00038626 0.00038626 0.00296530 -0.00058553 0.00038626 0.00955850 -0.72846000 0.65678000 0.01234600 -0.01246700 -0.01246700 0.01457900 -0.37157000 -0.42180000 0.000 0.000 -0.712 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 -0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 -0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 7.75933363 12.11292397 4.80139667 9.61525241 1.86052585 11.45038514 -0.05664124 -1.64160374 8.57519999 7.55567047 -1.64160374 7.19743689 2.16581549 10.54239949 9.38359349 5.75933430 6.31845604 9.54146896 7.62991683 10.33394370 9.74615369 7.97867386 10.01487886 1.35845253 7.00591194 8.78890655 3.64385619 -0.05664124 11.61657829 2.94341503 12.44376043 12.00208473 7.63457802 9.93588283 8.33286857 9.65880647 5.61584295 1.94343378 NA 5.57762218 8.82299967 8.72039784 9.29361901 3.35845253 10.19365176 6.97316352 9.99869887 4.71600865 10.79073490 NA 9.86525740 3.11333378 4.13981326 9.51277838 7.59468365 2.60637116 8.39325272 6.48257566 7.03441052 0.35850879 13.89897557 -1.64160374 11.51311388 NA 8.50056108 4.71600865 8.45780193 8.54827863 15.427644 5.874153 9.424543 13.221818 10.172636 10.295828 13.492439 13.165155 8.278807 10.589375 12.139199 11.518956 8.786814 8.817886 3.265347 8.658807 13.735325 11.183612 6.897613 8.888860 10.085949 9.702195 11.041038 4.002306 10.559659 10.796206 6.639225 -1.641604 6.324238 8.932319 8.897613 10.338594 10.003212 9.938241 9.927360 3.716003 9.022901 10.701084 11.038594 9.401481 10.365131 8.433933 1.165815 8.085404 5.577622 3.402845 11.171032 5.358453 11.574594 10.323156 7.130174 14.085258 10.675018 9.397373 12.435353 11.558280 10.017558 1.165815 TCGA-E2-A106 34 0 NA 1807 breast stage ib t1c n1mi m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 asian not hispanic or latino 80.55.0 3 2 NA 2 NA NA 1 1 3 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.5077889 3.6640959 6.8701995 12.6760382 0.5348585 10.3401500 -0.4651415 9.7648295 11.2565492 7.3485901 8.9537157 7.5900915 10.1347220 10.0946641 7.8612383 9.5348091 10.6059362 9.0913150 5.8835377 0.8567069 10.1813678 9.6439867 14.8476566 9.6169581 8.2248072 10.9728212 3.6640959 10.6563232 NA 0.5348585 6.0893986 12.6259965 12.7189096 8.1046648 13.1346057 14.1898366 9.0075000 3.1786668 NA 5.0583728 8.2160474 11.5081477 6.8015958 13.6485920 -0.4651415 11.1316977 14.0388832 1.5348087 9.2772618 11.2462610 8.6794674 9.7594139 NA 14.1361905 6.5516175 1.5348087 7.9505506 NA 3.7047392 9.7998380 9.1150676 10.8271308 8.9993549 9.4318983 9.5474336 5.3029916 10.7378512 10.0401245 6.2695195 7.7992518 1.9942539 10.3429689 14.1098460 8.3839954 10.7919023 11.3545890 6.3549881 0.8567069 8.0564096 7.2796431 8.8248280 11.2302549 -0.4651415 4.5571772 8.0266623 8.8097697 11.0186249 7.4625873 2.6222744 3.1786668 9.9206716 11.8157248 3.9942448 13.6818550 6.2762752 8.0426038 12.6291343 9.7314112 12.7625754 8.7696266 11.3787301 11.0363976 10.6232993 10.6791487 4.2896943 8.8397307 11.9026334 9.4484465 NA 10.0710563 9.5982042 -0.4651415 3.0602550 8.8248280 10.1079830 9.7874746 9.1309988 15.6311434 10.6756389 10.2045799 8.1568607 4.3421636 15.2927980 9.5640963 10.9114772 10.2921991 10.3271928 9.6209454 8.0226491 11.0204473 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.0855564 11.3373255 4.2072369 8.8746590 3.0844725 11.8435747 -0.4651415 NA 8.3881185 6.3740135 NA 6.1197712 0.5348585 10.1305329 9.0435944 1.3421565 5.3161675 9.3153489 7.7466977 11.2921991 9.5235647 7.8657258 10.5575237 0.8567069 10.9500227 9.5474336 3.9271285 -0.4651415 11.2224035 0.8567069 11.6470857 12.4500349 7.6511529 9.7271019 6.4536723 9.2195577 3.6222744 1.7047392 NA 5.9860195 8.6666661 10.3759804 9.4182161 2.8567467 10.6354320 9.1160096 9.6446397 4.6640903 10.0539538 -1.4651415 9.8746591 4.4890034 4.7047337 9.6209917 8.2119121 2.1197878 9.7165825 6.9484373 7.0064843 NA 13.7382718 -0.4651415 11.1094026 NA 8.1235239 6.3292259 8.1840655 8.5585634 12.5786908 5.4174509 8.6433335 13.1346057 10.2045799 10.1037153 13.6485920 14.2052717 8.1550292 10.4067144 13.0200724 10.9873078 8.8248280 9.8328717 -0.4651415 7.6354715 13.1619440 10.6252524 5.9942403 8.4919112 8.1983674 8.3912346 10.5750269 4.3676995 11.1800172 9.6169581 6.2072350 NA 8.8634841 6.1895874 10.4762236 9.6472487 8.0970513 9.8213669 11.5625424 3.1786668 10.8271308 10.2134093 10.7992517 9.0166086 10.2309073 8.9901363 NA 9.1334387 4.9441978 5.0739659 11.0186249 5.4890066 10.1421395 9.9206716 7.4053900 12.5435879 10.5654763 9.5550947 12.3812789 9.3935672 9.4955351 -0.4651415 TCGA-E2-A107 54 0 NA 1047 breast stage iiia t3 n2a m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma no 4 white not hispanic or latino 80.55.0 6 3 3 2 2 4 1 2 3 3 NA NA 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.946798e-07 11.00297770 4.55281355 6.57799069 11.88549471 NA 8.75068622 NA 9.17042159 11.60962141 8.11042380 10.02603176 7.78460802 9.03968950 9.83037767 6.87067049 9.25793323 10.72076010 9.08342428 5.61251764 1.40304953 9.67102192 10.44643397 9.83247154 11.75358975 8.13268582 10.38783931 4.61251764 10.11988435 -0.59684137 3.04692754 6.46915338 10.73817605 11.49019615 5.53234813 13.62861123 13.82667323 8.84289589 8.47184304 4.57299271 6.62706689 7.84600807 10.18360462 6.49052841 12.64214123 4.07548985 10.64504799 13.50085011 6.68383538 10.49281327 10.63608532 7.94222359 5.13098439 -0.59684137 13.47821513 8.69634095 -0.01202434 6.52200552 NA 3.35725640 9.82091736 10.49714259 10.08210499 10.82355147 9.08868967 9.35580608 1.72499944 11.07106342 10.32824834 6.28570737 8.35289135 -0.01202434 10.82801840 14.15502727 7.85553256 11.14579532 10.73426176 8.82618078 1.40304953 8.43786399 8.40447316 7.47720617 11.85556351 -1.59684137 3.72498853 7.74068678 10.58141848 10.85607820 6.44198304 3.82933204 4.23595677 9.71197269 11.52022093 4.55281355 13.67434549 6.70227244 6.70227244 10.48421538 14.46321190 12.24246550 9.28799858 10.24541520 10.39918520 10.10484783 10.48853730 3.57298665 9.48321621 11.15941267 10.10393806 -1.59684137 10.14411037 8.78784870 0.40304953 2.76062548 8.66163097 11.34521278 8.75400391 7.29484862 15.00714024 10.09218920 9.23674564 7.97102099 2.10349764 16.40396164 9.94995930 12.72245473 11.23536154 10.10653585 9.72330138 7.62706689 11.23379395 5.4206e-01 1.0990e+00 1.1336e+00 -7.3545e-05 -1.1861e-02 -7.7482e-03 2.8517e-01 -3.1237e-01 -3.2219e-01 3.2060e-01 3.2060e-01 3.0761e-01 2.9963e-01 2.9963e-01 0.0000e+00 1.2246e+00 -6.0844e-01 5.6418e-01 5.6418e-01 -3.0933e-01 4.7190e-03 1.3492e-02 2.9787e-01 2.9787e-01 2.9787e-01 -1.7116e-02 -1.7116e-02 -1.7116e-02 1.8597e-02 -2.8453e-01 -2.9154e-01 -8.8904e-02 -7.3545e-05 -7.7482e-03 -9.5426e-03 2.8517e-01 2.8517e-01 -3.1237e-01 -3.1237e-01 -3.1096e-01 2.7931e-01 2.7931e-01 3.2060e-01 3.6917e-03 3.6917e-03 6.7426e-03 6.7426e-03 2.9963e-01 2.9963e-01 0.0000e+00 -6.1758e-01 5.6418e-01 5.6418e-01 5.7952e-01 -3.0510e-01 -9.0074e-03 1.3492e-02 -6.0941e-01 2.9787e-01 2.9787e-01 -2.9829e-01 -1.7116e-02 -1.7116e-02 2.2585e-02 -6.0322e-01 -6.1230e-01 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 -0.285 1.134 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 -0.285 1.134 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 7.27958180 11.93298337 4.21042004 9.54005595 2.98743002 11.14537431 2.21042004 -0.59684137 9.31370751 6.89090506 -0.01202434 6.85567706 3.44746018 10.18319444 9.65691229 4.07548985 6.51158980 9.19178322 7.94222359 10.81722152 9.27920569 6.29788288 10.20558117 2.21042004 9.48388247 9.35580608 2.92662572 -0.01202434 11.18974291 1.86251090 11.53620709 11.98626519 7.15795218 9.23199465 6.96911940 9.78676917 5.54261713 1.21038886 -1.59684137 9.37388981 9.63428596 10.12288143 10.97386932 5.41429116 8.08498851 8.48521387 10.99107671 5.96530638 9.66574699 -1.59684137 11.34978843 0.40304953 3.35725640 9.82927717 6.41194140 -0.01202434 9.48986461 7.17785203 8.11387133 -0.01202434 13.63439855 -1.59684137 10.24816276 NA 5.41429116 5.99552296 7.30393140 9.04872335 14.438167 6.345579 8.619811 13.628611 9.454274 11.594587 12.642141 10.284561 7.949959 10.394587 12.941375 9.622838 7.477206 8.647429 2.988030 7.357261 12.285899 11.42508585 8.13946694 8.50766344 10.15878702 9.85941924 11.07367686 6.12416475 8.01961352 11.75358975 6.66045235 2.30996195 4.91085736 8.54296142 8.88587296 10.71225701 8.80714204 9.65868367 9.83508466 3.95765463 10.08210499 10.86658920 10.76253992 10.20153671 10.79699157 7.36884952 -0.01202434 8.90651304 7.36306680 3.04692754 10.85607820 3.92662572 9.98755764 9.71197269 6.68846713 12.77232140 10.00947007 9.67336014 12.71303852 10.92907499 9.34411256 0.72499944 TCGA-E2-A108 64 0 NA 837 breast stage iiia t2 n2a m0 2-10-2014 female 2009 315 NA infiltrating ductal carcinoma no 4 white not hispanic or latino 80.55.0 8 2 2 5 3 2 3 3 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.24885e-06 3.815932e-07 11.5461853 9.4092660 6.2746959 11.0145805 2.8783526 10.2837351 1.1128336 9.6970195 11.4014440 10.2160964 9.4120166 7.6110595 8.3739631 9.8049009 7.0292850 9.4517677 9.5623699 10.0768606 8.4791307 6.4055908 10.1933596 10.6006486 12.2150467 10.3800634 9.6719944 10.5059845 9.1184332 10.2777054 -1.2092280 1.5982223 10.4374392 13.0564955 12.4627532 9.0635102 11.4486455 10.9695453 10.7617054 5.0576669 0.3758457 7.4202373 8.8062954 8.8756888 8.1440275 11.2676266 -1.2092280 11.4336091 12.0417710 6.4419316 9.4469925 10.4633058 10.5942044 7.9482276 3.9608082 14.9138105 13.3181674 4.3758457 8.5933967 -1.2092280 5.7097428 9.6819046 10.0687490 9.4999642 10.4450689 9.3154222 10.2239443 3.6977738 11.0852140 9.9825566 5.1128085 8.1014930 1.9608082 9.4703605 15.1370305 7.6434096 11.0866494 10.7461671 10.2034503 1.1128336 2.5982461 8.2726797 9.3889330 11.8132483 -0.2090612 3.4347350 7.4092662 10.4986709 10.9288322 6.0670040 8.0576669 6.2584869 10.3046080 11.4663965 NA 13.7906162 3.9608082 7.2213329 12.0813313 12.0722310 12.4061652 7.7936956 9.7731610 10.7584670 10.3144424 11.1705296 5.0946626 8.2129452 12.0526815 10.2508243 0.7908554 10.7720909 9.5272823 1.7908971 3.0327180 9.8366401 10.5373948 9.9707895 8.9494900 15.0367488 9.8974434 10.3926512 7.0388082 5.4202365 14.5887952 8.9456984 13.4815878 13.0859319 9.9701676 9.4913202 8.1831977 9.6482860 0.0563080 0.0563080 0.1536700 0.0282000 0.0778620 -0.0675920 -0.0422450 -0.0862530 -0.0862530 -0.1283100 -0.1283100 0.6522200 0.1849500 -0.0841690 0.0200630 0.0200630 0.0200630 -0.0165410 -0.0165410 -0.0718730 -0.1165200 0.0119580 -0.0704020 -0.0704020 -0.0704020 -0.0077482 -0.0077482 -0.0077482 0.0873900 -0.0161670 0.0563080 0.0068044 0.0282000 -0.0675920 -0.0675920 -0.0422450 -0.0422450 -0.0862530 -0.0862530 -0.0862530 0.1586100 -0.0698220 -0.1221300 -0.0068323 -0.0068323 -0.0068323 0.1203500 -0.0841690 -0.1199100 0.0200630 0.0200630 -0.0165410 0.0640820 0.0640820 0.0246890 -0.1165200 0.0119580 0.0000000 -0.0704020 -0.0704020 -0.0781260 -0.0077482 -0.0077482 0.0873900 -0.0208240 0.0255310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 10.4821878 12.8678630 6.6673969 10.2513364 4.8319937 10.2176694 4.8994028 2.5982461 8.3164015 9.8311701 NA 9.2466905 6.5457676 10.3645277 9.1778206 4.2827363 10.6554535 9.2431216 10.1632015 9.3767820 9.0080748 7.0100491 12.3248185 4.2503098 7.5153939 10.2239443 5.4633053 NA 11.1481575 3.2503098 13.1811166 12.4168176 8.6811446 10.1206768 9.2055658 9.2150468 7.9098217 4.0762854 0.7908554 1.9608082 8.4256913 9.2482613 9.2023915 7.0052001 8.0267032 7.3105164 9.8359575 5.7450759 9.2686386 -0.2090612 11.5486871 4.6237732 4.8132476 9.3281570 5.8249638 7.2045085 10.5119796 10.3777203 8.8380044 -0.2090612 13.6218907 2.5982461 10.4101834 -1.2092280 8.0808991 6.5119803 7.6237703 9.0832022 11.770663 5.697771 8.648862 11.448645 10.261031 10.460651 11.267627 11.251336 9.213996 10.606664 13.408520 11.347626 9.388933 9.241061 -1.209228 7.572240 11.035542 11.342348 5.867696 8.856970 8.807689 7.793696 10.287040 8.637938 8.286736 10.380063 7.703770 4.813248 5.038809 7.549936 11.731561 11.300161 8.208733 7.840729 11.062927 8.634802 9.499964 10.637938 10.839367 10.991166 10.906249 9.164833 3.648857 9.414149 8.123163 8.577150 10.928832 7.727518 11.076283 10.304608 7.170259 13.844934 10.117310 10.819132 12.742074 10.231231 9.705266 3.960808 TCGA-E2-A109 64 0 NA 1417 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 80.55.0 3 1 1 3 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.630444e-06 3.815932e-07 13.1414976 2.8242383 7.3118981 12.0441375 -0.1143475 9.3552749 NA 9.7425772 11.9905593 12.1993663 10.0824399 7.2722136 9.1594286 9.3874702 8.9897950 9.4267296 10.6735356 9.4972726 6.3828194 2.9445212 10.7776697 9.0688548 15.3914549 11.1178540 8.9924141 10.6786943 5.8552597 10.0954925 -1.6994662 0.3006509 8.5378804 11.2666351 13.1773313 6.8163706 13.4069880 12.8658321 8.3313375 5.0688556 0.3006509 6.0353798 8.3828194 8.8818711 7.5222575 13.5853139 -0.1143475 9.0063028 13.4709477 1.6226024 9.4057539 11.8381316 7.4554883 7.5462231 2.0011177 13.4854226 8.6876108 0.6225556 9.0311407 -1.6994662 5.0820298 9.8422512 9.7379024 11.1880815 9.2929007 9.4712216 10.0568097 1.8856525 11.1414484 9.9664505 5.6493999 6.5627660 -0.1143475 10.0157745 14.6916287 8.1637261 12.0003514 10.8437023 8.0605587 1.1080226 7.9889210 7.1303935 8.8417672 10.7557408 -1.6994662 5.8398286 8.0285907 9.3874702 10.8131641 5.5101233 5.4504162 4.1335635 9.4510524 12.2601291 6.5485985 13.8130715 5.1833118 7.5883826 11.1808280 12.4083780 12.6613804 7.3505193 10.7544555 10.5860726 10.0183554 10.9803705 5.0820298 8.3654130 11.4152262 9.5662855 -0.6992320 10.1714205 9.1779547 0.8856525 2.3051826 9.3934276 11.1174541 10.1268216 9.4254381 14.4327082 11.5290382 9.6343849 7.2865125 2.1080226 15.7717185 9.0045741 11.6054496 10.5677497 10.1027829 9.4222040 8.5402691 11.0397380 -0.279180 1.458900 0.984110 0.120050 0.120050 0.127560 0.062223 -0.023977 -0.717340 3.656900 1.251500 2.724600 0.067518 0.067518 -0.310140 2.495600 -0.328320 0.814740 0.106670 -0.081073 1.121400 -0.157070 -0.486070 0.334800 -0.395530 -0.335030 -0.319370 -0.322400 0.860170 -0.317620 -0.279180 -0.602840 0.120050 0.108560 0.123580 0.062223 -0.039188 -0.141970 -0.717340 -0.597080 -0.093799 -0.328090 0.557430 -0.714700 -0.696760 -0.309680 -0.295230 0.067518 0.067518 0.303780 -0.317510 0.106670 0.099579 0.099579 -0.703700 0.318190 -0.160010 -0.296620 2.476300 0.322050 -0.396190 -0.335030 -0.322400 1.170500 -0.150030 -0.158170 0.000 0.000 -0.310 -0.310 0.107 0.107 0.000 0.318 -0.157 0.000 0.000 0.335 0.335 -0.670 -0.670 -0.322 -0.322 0.121 0.400 0.000 0.000 -0.150 -0.158 0.112 0.112 0.120 0.120 0.109 0.109 0.000 0.000 -0.618 -0.618 0.000 0.000 0.358 0.000 -0.310 -0.310 0.000 0.000 0.000 -0.310 -0.310 0.107 0.107 0.000 0.318 -0.157 0.000 0.000 0.335 0.335 -0.670 -0.670 -0.322 -0.322 0.121 0.400 0.000 0.000 -0.150 -0.158 0.112 0.112 0.120 0.120 0.109 0.109 0.000 0.000 -0.618 -0.618 0.000 0.000 0.358 0.000 -0.310 -0.310 0.000 8.2299287 12.5985898 6.2722136 9.4485114 3.6153692 11.3606908 1.7600932 8.5462231 8.9391064 6.6669923 NA 7.0382891 2.6929851 10.6732635 9.2779504 5.9300276 7.6248510 8.8780994 8.3894588 11.9382010 9.8648533 7.3146911 10.6571224 -0.6992320 10.1092326 10.0568097 2.7600932 -0.6992320 12.9973664 0.8856525 12.2345455 12.1246347 7.5556988 9.1924541 9.4421390 9.3954080 4.8242332 2.8242383 -0.6992320 6.9588821 8.0421376 8.9588818 10.2380443 2.6226024 8.2759308 8.1288068 10.3874701 5.3118990 11.8318082 -0.6992320 9.6620661 5.5767942 4.5485969 9.6673697 5.6976182 6.6180830 8.2822378 9.0063028 8.0011103 -1.6994662 13.6592530 -0.6992320 12.0290162 NA 9.1524195 6.1015702 8.3491574 8.3104992 14.9454565 5.2893550 8.7015498 13.4069880 10.1168541 10.4091949 13.5853139 12.1187533 8.6304666 10.6903018 13.0369667 11.6282231 8.8417672 9.3041884 0.3006509 6.7559971 11.4322059 11.012122 7.198516 8.226967 10.366423 9.581441 10.247763 6.062221 11.379655 11.117854 7.292193 -0.699232 4.490493 8.423938 10.683835 10.235467 9.992414 10.039185 9.368777 5.987171 11.188082 10.699414 11.071334 9.788511 10.327885 8.945428 -0.699232 8.987644 7.390201 7.565113 10.813164 7.560414 10.676253 9.451052 7.277950 13.166162 10.345065 9.747754 11.887158 10.385811 9.500343 2.388134 TCGA-E2-A10A 41 0 NA 1229 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 3 5 2 NA 2 1 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 10.62207123 3.22886486 8.26570271 11.24586605 -0.62905459 11.12221954 NA 10.11361521 11.18906744 9.81175390 10.17743436 7.48202056 8.61286776 9.77815255 8.16041855 9.18306191 9.69112112 9.76641892 7.20377475 -0.04409209 9.91246544 8.76855951 12.95496641 10.95725545 8.93693881 10.38385838 3.27777651 10.72706156 -1.62905459 2.83031618 7.81175358 12.81343951 13.30738096 8.20851287 12.49063644 13.19569433 9.62650338 4.50016468 -1.62905459 6.83031618 8.41937161 10.88362517 6.97451096 13.58338110 3.83031618 10.83976328 14.97301811 1.83033646 9.84029249 10.92211235 6.43158118 5.34816513 NA 14.07647526 10.05957214 0.69278426 6.64700936 -0.04409209 3.45834263 10.21244908 10.54612237 10.92930546 10.16204761 10.17823970 9.11235167 1.37088963 11.70613547 10.19465000 4.91004184 8.37650919 NA 10.31046396 14.47669095 10.29095100 12.06448057 11.37756145 8.02730945 -0.04409209 6.91004304 7.55327909 9.39394598 11.92343375 -0.04409209 6.56070884 7.44234722 10.65628693 11.29755135 5.15224427 5.86273901 5.91004424 10.57117033 11.74116346 4.32508414 13.64540848 5.81382736 8.06611288 12.73884542 11.90955869 13.09123588 8.50016787 10.30862629 11.10897699 11.07196373 10.55947355 4.58033847 8.41117453 12.10124873 11.85696554 -1.62905459 10.22146230 9.02283328 1.17823658 2.84791675 8.79610063 11.39619733 11.32762388 8.78979151 14.78254466 10.47318854 9.67637655 8.74701003 0.69278426 15.10909576 8.09710298 12.06578669 11.28489603 9.95020068 10.16692428 8.24279017 10.01888714 0.0047686 1.5560000 -0.8420000 -0.0034133 -0.0034133 -0.0077795 0.0483120 0.0018526 -0.0048761 0.4048300 1.5656000 0.0014364 0.0092203 0.0092203 0.0217940 0.0217940 0.8855300 -0.8319200 -0.0035349 -0.0006435 0.0139610 0.8610300 0.0180130 0.0180130 0.0180130 0.0164750 0.0164750 0.0164750 0.0309230 -0.8266500 0.0047686 -0.0086653 -0.0034133 0.0187130 -0.0077795 0.0000000 0.0000000 0.0018526 -0.0048761 -0.0048761 0.0026853 0.0026853 -0.8464100 0.0129840 -0.7657500 -0.8402300 0.0230550 0.0092203 0.0408010 0.0217940 -0.8319900 -0.8319200 0.0177340 0.0779140 -0.0006435 -0.8343500 0.8454900 -0.8449700 0.0309230 0.0180130 0.0154970 0.0164750 0.0164750 0.0309230 0.0046297 -0.8647800 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.945 0.945 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.945 0.945 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 8.1734013 13.0790526 8.2195079 9.2672172 3.6188142 10.5257028 1.5408208 NA 8.3722931 7.3192521 NA 7.3566985 0.9558335 10.7882098 9.1157187 0.9558335 4.9100418 9.6922492 9.2830256 9.3082585 9.3222932 7.8384905 10.6623432 2.6928066 9.6740946 9.1123517 -0.6290546 -1.6290546 10.4771204 3.2777765 11.4161324 11.3276239 7.4098033 10.4332682 9.8251840 9.0237297 3.5803385 1.9558335 -1.6290546 7.3821121 8.4689168 8.9539674 10.3250810 0.9558335 5.3706595 6.2596284 10.5650260 4.7284376 9.7776212 -0.6290546 10.6475907 2.5408208 5.7107348 9.5392810 6.6226039 4.3016242 9.4173266 7.2867638 7.0643720 -1.6290546 13.3713689 -1.6290546 10.0516838 NA 7.5078755 3.4583426 8.1055943 9.0084152 14.598436 6.085129 8.553279 12.490636 10.544874 9.522536 13.583381 14.131890 10.058260 10.261149 13.810359 9.726236 9.393946 7.241249 3.797148 7.191064 11.998305 10.9182613 7.7459244 9.1423741 9.2140206 9.4787557 10.4311179 5.8303162 8.9340809 10.9572554 6.1782406 NA 6.1910632 7.2541386 11.6370856 9.6098864 8.3424281 8.6723808 12.7232041 4.8627390 10.9293055 9.7300853 11.6683742 9.5193612 10.5997034 8.7823958 -0.6290546 8.8844642 8.7451092 4.4369747 11.2975513 7.3538781 10.6065998 10.5711703 7.3224023 13.1742838 9.6092894 9.3694752 13.1019385 10.0477234 10.0025165 0.6927843 TCGA-E2-A10B 67 0 NA 1141 breast stage iib t2 n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 80.55.0 5 5 3 2 2 1 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 1.946798e-07 11.7234510 7.0963683 8.0241030 11.5342351 0.1865006 10.5058652 -0.2285369 10.5407247 11.9769256 8.0843210 10.5215865 7.9363447 8.8185617 8.7742527 7.0506617 8.6813308 10.3164023 9.9702920 6.7217513 3.1864689 9.4839649 9.5363094 15.0735650 9.3060649 9.3444537 10.9461555 5.9873754 10.8004926 NA 3.4344014 8.2157626 11.0094444 12.2523963 7.7639042 12.3222648 13.9220578 9.3463466 6.0993646 2.6459091 5.6043264 7.9889919 9.1744499 7.4391411 13.4255890 2.0933573 10.1370312 14.3080695 6.6376870 9.5389106 10.0038587 8.1794135 6.8375270 0.1865006 14.5639273 11.1528996 1.1865006 8.6873172 NA 4.4532608 10.1109166 11.2984260 10.8433470 11.2542458 10.2288187 9.6942699 1.1865006 11.6876905 10.2982631 6.3959282 8.1708940 3.6459091 10.5977215 14.5701965 8.2121826 11.8775645 11.3054164 8.6530618 2.0933573 3.6783311 8.0873419 9.3183322 12.2610349 NA 5.8158316 7.1580189 11.9958415 9.8549171 5.9413622 5.8659559 4.6942673 10.4029180 11.5416887 4.1406723 13.1567610 7.2116148 8.0209466 11.8117275 12.0451363 12.6062380 8.7236937 9.8690310 11.3659179 11.0037808 11.0894157 5.4344014 8.4092704 11.6111665 10.5343734 -1.8134994 10.1533412 8.4485702 -0.8134994 4.2754243 9.8021050 10.7995741 9.8764734 9.9808912 14.9546855 9.9853521 9.4885429 8.5852191 9.0436789 15.2152771 8.5407248 12.4816703 11.5854861 10.4080624 9.4361814 8.3273052 10.7879165 -0.0299200 0.9543800 1.0062000 0.1567400 0.1695200 -0.0193460 0.8140600 -0.0379200 -0.0180360 -0.0263660 -0.0263660 -0.0263660 -0.0366230 -0.0282800 -0.0318310 -0.0544720 -0.0544720 0.8306900 0.8306900 -0.0206120 -0.0304660 -0.0467800 -0.0523820 -0.0523820 -0.0523820 0.4030300 0.4030300 0.4030300 0.9347800 -0.0299200 -0.0299200 0.0061847 0.1567400 -0.0193460 -0.0042176 0.8140600 0.8140600 -0.0443900 -0.0180360 -0.0174540 0.2438100 0.2461500 -0.0263660 0.5430400 0.5430400 0.5430400 0.5430400 -0.0282800 -0.0282800 -0.0318310 -0.0281540 0.8306900 0.8279800 0.7874700 -0.0176230 -0.0304660 -0.0411840 -0.0431210 -0.0523820 -0.0523820 0.4494400 0.4030300 0.4030300 0.9347800 0.7473800 -0.0669830 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 8.6376863 12.7644351 8.0288255 10.0956184 2.7714419 10.4509179 1.1865006 -0.8134994 8.3538936 7.6962505 0.7714631 7.3690188 2.5787938 9.8637545 9.1001127 1.1865006 9.0645261 9.3688696 8.4833914 9.3183322 9.5509328 8.2646260 10.2366641 2.5787938 9.4999252 9.6942699 1.7714208 -0.8134994 10.3083325 1.5084287 12.0609764 11.8475853 7.2976106 9.7304737 9.9194907 9.3400274 5.3763008 2.5084033 -1.8134994 8.0413438 9.0444564 9.5798658 10.1698252 4.1172130 7.1837396 6.4344030 10.1504551 7.3688696 9.4828180 NA 11.9600267 3.6127417 4.7563295 9.5526883 6.3859021 3.0444641 9.9270994 8.4092704 4.9938283 -0.8134994 13.6797366 -1.8134994 10.4254770 NA 8.3922685 5.4152956 7.7352974 8.2989149 11.0429009 6.0066548 7.9986525 12.3222648 10.1034743 10.8823561 13.4255890 12.2694559 8.7582279 11.6624620 13.1330161 9.6438562 9.3183322 9.3093033 0.7714631 6.8694705 12.0756941 11.5802679 8.7975001 8.8158319 9.6606882 8.7227225 11.6071580 6.6418032 8.6095914 9.3060649 6.5830798 2.3563974 7.3861479 7.5471027 10.9861617 10.4128875 7.4764943 8.3183322 13.3800392 5.4056453 10.8433470 10.8162872 11.5862873 10.2953264 11.1415803 9.2219616 2.9938374 9.4966563 10.5763728 5.1053386 9.8549171 7.7139521 10.3939107 10.4029180 7.3790638 12.9532630 10.3971467 10.2434517 13.0616487 10.3397106 9.8921077 0.7714631 TCGA-E2-A10C 54 0 NA 1220 breast stage iib t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 80.55.0 6 3 5 3 3 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.880714e-06 2.567081e-06 11.22858988 4.62867446 8.14982433 11.58041008 NA 9.75557996 NA 8.41607716 10.74402087 8.64076443 9.14982433 8.06266357 8.04717846 9.02626946 7.17141101 9.98216322 9.52256192 9.92682775 6.52815089 2.83513583 10.62390060 9.56486189 13.03086922 10.00705531 8.96989645 10.07544225 7.19502370 9.61210918 NA 2.38766583 7.91407952 9.86340236 11.72812600 6.30327663 12.87001857 12.69207212 9.05752040 4.05751959 -1.07187607 5.99432628 8.37118072 9.78076678 6.19502469 12.68874937 4.70959944 11.82966994 12.96595586 4.62867446 9.61210918 10.67894436 9.03676184 7.28138390 -0.07172444 16.02625471 10.42990537 1.92823766 7.61823498 NA 3.78621996 9.12053002 10.28908436 9.17260127 9.41507244 9.43305625 9.68729327 4.05751959 11.20145014 9.95614336 6.65615739 7.65275106 3.25015817 9.64076425 13.88869185 7.79214476 10.50472168 10.46108025 9.30001387 1.25017333 -1.07187607 8.16902855 6.94504580 9.72184069 NA 6.57209385 6.85305000 8.62520472 10.38561816 4.65615883 6.89402103 4.45179796 9.44196499 12.05961202 4.70959944 12.67674468 6.71614039 7.26808719 10.35973496 12.64366315 12.66928291 7.20900782 10.55759399 9.97944620 9.41908819 9.96578428 2.09815002 9.42808312 10.87258339 8.02099438 NA 10.58376803 8.91692204 1.73560882 4.01570273 8.59534887 10.70302437 9.27364246 8.44787339 15.48297606 9.82229724 9.98148451 8.51507730 1.25017333 14.12334035 9.11806195 12.66685741 10.86192800 10.25522855 9.87441261 7.79860205 10.16162332 -0.234350 0.438680 0.438680 -0.237040 -0.237040 -0.049965 -0.035176 0.602800 0.124470 0.825100 0.825100 0.825100 0.099724 3.656900 -0.205350 -0.205350 -0.073343 0.462460 3.656900 -0.239120 0.451900 -0.153240 0.122840 0.122840 0.122840 0.017963 0.140130 0.140130 0.188740 -0.234350 -0.234350 0.117560 -0.237040 -0.049965 -0.049965 -0.035176 -0.212800 -0.244360 0.059372 0.124470 0.458540 0.451560 -0.252730 0.000000 0.000000 0.000000 0.000000 -0.242410 -0.242410 -0.233350 -0.073343 0.447050 -0.248370 -0.248370 -0.239120 0.451900 -0.232140 -0.243500 -0.129230 0.122840 -0.229690 0.017963 0.140130 0.188740 -0.227970 -0.155150 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 0.124 0.124 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 0.124 0.124 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 8.98893316 11.73418269 1.92823766 9.43404895 3.01144197 10.97399699 3.51320016 NA 9.03152505 5.33762904 NA 6.37944768 1.25017333 11.06938653 9.15223895 4.13769205 8.03676156 8.89978076 8.64933666 11.99415827 9.14250789 7.15223920 10.13464130 2.09815002 8.63559661 9.68729327 1.92823766 1.51318752 11.17646141 -0.07172444 13.14566497 12.03888374 6.29456010 9.82002096 10.03021302 10.10128974 8.37738581 2.25017333 1.51318752 7.25915383 8.69807502 11.10285100 10.41758357 3.01569381 9.68487711 10.27751861 9.91336771 4.45179796 9.09440051 NA 10.62780981 2.25017333 3.45180456 10.19943188 5.99991434 5.97263063 9.10814648 8.74841628 7.49429159 3.32055688 14.17516345 -1.07187607 10.34819756 NA 8.48090650 4.76112567 8.98351981 8.61123178 10.988981 6.482826 9.552119 12.870019 10.067789 10.962004 12.688749 10.816219 8.210353 10.035454 12.783787 7.656158 6.945046 8.142556 2.928238 7.539262 11.118062 11.0671490 6.1856248 8.7145069 8.8426225 8.5539460 10.4613772 7.6112321 8.7939706 10.0070553 5.7355926 -1.0718761 5.2320198 7.2171493 11.3948236 10.6667519 7.2945592 9.0918870 6.5720938 5.8471000 9.1726013 11.2948328 10.7583563 9.0639467 10.3732522 6.9169220 0.9281997 9.6728609 8.5337537 6.7420183 10.3856182 9.0716206 10.6256394 9.4419650 6.7862187 13.5412210 10.0361082 10.4305719 12.1770544 11.0507418 9.5047217 2.3876658 TCGA-E2-A10E 64 0 NA 865 breast stage iia t1c n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 80.55.0 5 5 2 2 2 2 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 8.343418e-08 10.96080555 5.84078799 7.08995888 10.99927974 -0.67484388 9.67988787 -0.08988138 9.97613920 11.24021992 8.85158665 10.15560265 7.87390915 8.87967636 8.45694452 7.63569998 8.79167377 10.08247747 9.75606255 7.04960136 4.34745306 10.05343314 10.17410151 13.47978691 11.80562523 8.80789551 10.53575875 5.55390725 10.69549427 -0.67484388 -0.08988138 7.92127743 12.06876481 12.76023679 8.17371061 13.09544163 13.33758105 8.88923685 6.45951359 3.87967636 6.39654998 8.37357427 10.34849525 6.90251621 13.98134470 1.32509854 10.27308958 14.45037983 7.51243945 9.87092073 10.86787747 8.83980153 7.77010223 0.32504096 14.10403134 10.67961231 2.49500435 7.63569998 -0.67484388 2.71740773 10.19197995 10.99927974 10.99817561 12.33867182 10.25804033 10.08039238 0.64699208 11.77526771 10.09698957 5.36948044 8.48495860 4.20772890 11.04469014 14.56891225 9.71837601 12.09203039 11.78234004 9.21002107 0.64699208 5.66493788 8.76595669 8.85256446 12.84944551 -1.67484388 5.80890241 7.10316504 10.00764319 11.60455295 4.76803078 5.91004904 4.41255122 10.79065387 12.01147855 3.18307358 13.79043065 5.74294129 7.73447864 12.28599441 12.57819626 13.12046763 8.43099607 10.59011637 10.65684420 10.23255656 10.47197429 5.13244112 8.22896920 11.80638235 10.91777805 NA 10.25138347 9.04104937 1.64703815 3.91064633 10.05767892 11.30093541 10.25693304 9.12436898 15.15578833 9.93288013 9.68976932 9.14925073 1.49502994 17.30445402 9.86569987 13.87342773 10.91824512 10.38341745 8.90157169 8.69577498 10.48694360 -0.71957000 0.67178000 0.67178000 0.00000000 0.00000000 -0.00691950 0.09260500 0.00877190 -0.00904190 0.00077952 0.00077952 0.00077952 0.00707470 0.01265500 0.00921530 0.72546000 1.97760000 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.02202400 0.01488800 0.01488800 0.01488800 -0.00434930 0.01754400 -0.00816240 0.07887100 -0.71957000 -0.71957000 -0.00622860 0.00000000 -0.00691950 -0.00691950 0.04287400 0.04287400 0.00190060 -0.00904190 0.01474900 -0.00346270 -0.00346270 0.01558700 0.01614600 0.01614600 0.01614600 0.01614600 0.01265500 0.01265500 0.01992300 -0.73073000 -0.00013862 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.02202400 -0.75116000 0.01488800 0.01488800 -0.74680000 -0.00434930 -0.00816240 0.07887100 0.01447000 0.04131700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.720 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.720 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3137723 13.1824853 7.1292181 9.9498829 2.8252565 10.8363460 1.6470381 0.9100418 8.5670704 8.0185746 1.6470381 8.2587780 3.4125512 10.5262925 9.1635035 2.6470151 7.6957746 9.2785563 12.8141200 10.0551330 9.5690469 7.9062881 10.5415302 1.9100418 7.7429399 10.0803924 2.7845249 NA 10.1512387 1.7845040 11.9189454 11.4014020 7.5173804 10.5554082 9.6957748 9.2145914 5.9100490 0.3250410 -0.6748439 2.3250985 8.9644281 8.9680418 10.9430140 4.5730170 8.9806360 7.2617254 10.4764212 5.5539072 9.9347279 NA 11.3125291 3.4543733 4.2792856 9.7638534 5.2547603 3.9100514 9.2214199 7.0631793 8.1324421 -1.6748439 13.8330988 -0.6748439 9.9370343 -0.6748439 7.6197079 4.2319776 7.8525645 9.3037979 14.062019 5.832882 8.312352 13.095442 10.078254 11.036754 13.981345 12.408401 10.641182 10.685111 13.834429 9.590702 8.852564 9.077468 -1.674844 7.228970 11.707711 11.232542 8.555108 8.477372 8.587182 9.011588 10.533675 6.025527 7.246929 11.805625 6.428375 2.325099 7.103165 7.266810 10.314127 10.040191 8.512439 7.676027 12.399313 5.628867 10.998176 10.058526 11.983857 9.108086 10.521382 8.593044 NA 8.824166 8.793416 4.832880 11.604553 6.713105 10.687305 10.790654 6.976139 12.844601 9.469746 9.822440 13.353857 10.386796 9.590702 1.495030 TCGA-E2-A10F 47 0 NA 878 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 412 NA infiltrating lobular carcinoma no 0 white not hispanic or latino 80.55.0 5 2 2 2 NA NA 1 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.39057e-07 10.8488870 8.0782853 6.7436981 11.0125785 1.5391340 10.6119290 NA 10.0865030 11.9550002 11.2668342 9.8861941 7.7264784 8.5587173 9.3311033 7.4579898 9.7221413 10.0148599 9.8059130 7.7510144 2.5391340 10.6122637 9.4263470 7.9862095 11.0607269 9.7065445 10.6272521 6.8291455 9.9564515 0.5391340 1.8610422 9.1802749 11.9495778 12.8278483 8.2516533 12.5983019 12.9601393 9.6587160 6.9228306 4.5614972 6.7338831 8.2653445 8.8222149 8.2653445 12.9219530 2.2395813 10.5012994 13.6568507 5.2805926 9.2955828 11.0229422 7.6450351 7.2150835 -1.4607667 13.9215252 10.6580675 2.4460180 8.0249557 -0.4609653 4.0309805 9.9114474 10.4965913 9.7631280 11.4236785 9.4025384 9.6456894 2.2395813 11.2181666 10.3947736 7.1315833 8.9882751 2.7870563 10.8132133 14.8996135 9.3430718 10.9823290 10.9432036 9.2981824 3.1240965 3.7090480 9.5711722 9.2940139 11.5998223 -0.4609653 6.1165561 7.5642661 10.1991223 11.5016610 8.2636401 7.1684826 5.9903377 10.6888735 12.0322313 4.2670488 13.7618836 5.7387976 7.2221206 12.8552665 13.5923735 12.9451985 8.4460171 10.2097827 11.0857798 10.7317121 11.0785276 4.8966787 8.3861837 12.1329843 12.0518669 -1.4607667 10.5632272 9.1269040 1.8610422 3.6278636 9.4079490 10.6450349 9.8988760 9.4831063 15.0964854 10.2721417 9.8417653 8.0724564 4.4460180 14.4310288 9.8175759 13.5946631 12.0550726 10.2998463 9.7027761 8.8082531 10.6579280 -0.05361100 0.72873000 0.72943000 -0.00346270 0.00000000 -0.06477700 0.01363200 -0.05792400 -0.45147000 0.02314500 0.02314500 0.02314500 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01530800 0.01153900 0.01153900 0.00722170 0.01782400 -0.04224500 0.02791900 0.02791900 0.02791900 0.01363200 0.01363200 0.01363200 0.02763800 -0.05361100 -0.05361100 -0.00013862 0.00000000 -0.06477700 -0.06477700 0.01363200 0.01363200 -0.05792400 -0.45147000 -0.45147000 -0.06558100 -0.06558100 0.02314500 0.01712400 0.01712400 0.01712400 0.02651400 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01153900 0.01153900 0.01153900 0.00722170 -0.42996000 -0.42407000 -0.43116000 -0.42549000 0.02791900 -0.04915400 0.01363200 0.01363200 0.02763800 -0.08107300 -0.40584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7828954 13.7094818 10.1919714 10.3237613 0.5747313 10.5984709 0.1240634 NA 8.3609002 8.4669044 2.7870563 7.8496484 4.0937123 10.3428539 9.2026846 1.7090700 9.2291243 9.1529158 10.0274687 9.9233706 9.5369621 8.0744016 11.2102251 3.0626916 8.4110317 9.6456894 5.0148596 NA 10.6072329 3.9314467 12.7717722 12.0307290 8.7027760 9.8216358 9.5020224 9.1982304 4.6476484 2.7870563 1.1240634 7.2906704 8.6876031 9.2238750 9.2533719 5.3464818 8.8915562 6.5221201 9.6554704 6.1315833 9.6450349 0.8610819 10.9714073 4.0309805 4.5164060 9.7350890 6.3890006 3.4933271 9.8348953 8.9010702 5.8337478 NA 13.7698224 NA 10.1630079 -1.4607667 8.9737548 4.4933207 7.5475547 9.1269040 13.490092 5.738798 8.338408 12.598302 10.468755 10.979736 12.921953 12.284591 9.597118 10.996764 13.490502 11.117735 9.294014 10.286061 0.539134 7.215083 10.950108 11.3761629 7.2636401 8.9985580 8.9893068 8.7314192 10.3152468 7.6212753 5.1538378 11.0607269 7.9862095 4.8789754 5.9228306 7.1520313 11.9134867 10.3589063 9.4278697 8.2395661 12.2214627 5.4460180 9.7631280 10.6172772 10.4998524 10.0168847 10.6860133 9.6496097 0.8610819 9.5629153 8.0540773 4.6888741 11.5016610 8.0802233 10.5618479 10.6888735 7.5916944 13.9351625 10.1203269 10.3802976 13.1564791 10.6626012 9.6977361 1.8610422 TCGA-E2-A14N 37 0 NA 1434 breast stage iib t2 n1 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 103.51.0 4 4 2 1 NA NA 2 5 2 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.561063e-06 3.815932e-07 11.5837704 4.4813248 6.5098922 11.2192794 NA 8.8218846 0.4224483 8.5670868 11.0686873 8.3843607 9.8839081 7.4595177 7.8681330 9.3393033 8.0710858 9.5439621 7.7322841 10.7722627 8.8968104 5.2468565 11.2534719 11.4429456 12.3128195 10.9907014 10.1297877 10.9005241 5.5923524 11.6542378 -1.1626218 0.4224483 7.2510942 11.1159155 12.9209454 8.0590535 10.2037883 11.4020919 10.3407949 7.8486930 3.5923494 7.9328632 9.0913135 9.7078309 5.2637293 7.0223412 NA 12.2758681 11.9585139 7.8763849 9.3629868 11.1170766 4.9035541 5.5517129 2.2968979 13.2047088 8.6576450 -0.1624604 7.2297831 NA 0.4224483 8.5344336 10.7858333 9.4299230 9.5923535 9.0420372 9.7981921 -1.1626218 10.3717689 10.1378187 4.6448196 7.2037885 2.7443549 8.2233284 13.8514865 7.7917496 10.7989158 10.9979678 11.9035552 -1.1626218 NA 8.4540150 9.5636842 11.8081113 NA 3.6954482 7.2595305 11.8133140 8.4429456 5.1412488 6.3293192 5.4521770 8.3253059 12.3872507 0.4224483 13.3617629 2.9249360 6.3610279 10.9910181 12.1402478 13.2147444 5.8598329 9.8913920 10.7428531 10.1817620 10.3358166 3.5923494 8.4148949 13.3158565 6.1320874 -1.1626218 10.5487029 10.5090071 2.1594031 2.6448254 9.7865632 8.7682035 10.1222902 9.5195828 14.6503202 10.1789848 10.3422851 6.8653720 0.4224483 13.2417428 5.0853949 13.7545584 13.1603801 10.0229610 9.0936748 7.8486930 9.0629145 0.09191600 0.11638000 0.25652000 -0.09828600 0.38419000 0.24958000 -0.12148000 -0.04747400 -0.02685100 0.22592000 0.22592000 0.54524000 0.43243000 -0.13355000 0.09696100 0.09696100 0.09696100 0.28945000 -0.06659600 -0.10802000 0.00000000 -0.04414400 -0.04048000 -0.04048000 -0.09176800 0.12182000 0.12182000 -0.09512000 0.02862200 -0.12707000 0.09191600 -0.10828000 -0.09775900 -0.17284000 -0.11103000 -0.12148000 -0.12148000 0.14890000 -0.02685100 -0.02685100 0.26891000 -0.19287000 -0.30062000 0.56881000 0.22453000 0.22453000 -0.08598800 -0.10828000 0.25840000 0.09696100 0.06871600 0.28945000 -0.06659600 -0.06659600 -0.11747000 0.00000000 -0.10147000 -0.09214200 -0.04048000 -0.04048000 -0.09247800 0.12182000 -0.09512000 -0.09406400 0.10424000 0.00013863 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 7.7473592 11.0933798 4.0469188 7.2804098 3.0701317 11.0895401 1.1593708 2.0073749 9.3766249 6.4447963 4.6188260 8.1182138 5.2968979 11.8922399 9.5864974 1.4224483 7.9667488 9.9196151 6.3212823 8.9328632 8.8321872 6.6056499 10.1700621 -0.1624604 9.2999683 9.7981921 2.0073749 NA 9.7902074 5.5517129 14.0974667 12.1267645 5.8261519 9.9209454 12.4686431 10.6588415 2.2968979 1.4224483 0.8374589 -1.1626218 8.6892153 7.6703560 7.4186664 5.9035541 8.0210766 5.7682029 10.3268124 4.1950168 9.7360675 5.2804107 12.0421900 3.0073929 5.8486930 10.8949129 7.6170538 5.1593951 7.7858330 6.9354986 3.9667535 0.8374589 13.9214439 NA 10.1383906 NA 10.6143103 1.8374589 8.2595310 6.9302228 10.518704 9.690776 9.305072 10.203788 9.937471 11.746609 7.022341 8.675094 9.382208 11.036218 13.550047 13.216980 9.563684 8.934181 4.695448 8.059053 11.099267 10.444796 4.392056 9.347241 8.866753 7.195018 9.386548 5.837466 4.644820 10.990701 11.432490 NA 6.132087 8.965925 12.312693 10.197765 8.237833 8.625369 8.092494 6.452175 9.429923 10.644821 10.732284 9.770419 10.185641 8.787293 NA 9.474480 6.530952 5.803250 8.442946 8.742853 10.627407 8.325306 8.129788 14.847229 10.536605 11.448030 12.577036 11.351194 9.094854 3.085391 TCGA-E2-A14O 76 0 NA 1359 breast stage iiia t3 n1a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 85.58.0 3 1 1 NA 2 2 1 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 5.562279e-08 12.0369994 1.2659169 7.6057728 10.7446923 -1.3190456 9.4088806 NA 9.2752848 10.9597000 12.2654530 10.1753158 7.3320115 7.7973042 8.4088808 8.9205586 7.7816227 9.0051409 9.4753760 5.9193639 2.0028825 10.3577987 8.9061676 13.7474278 11.7973041 8.8370432 10.5166159 3.8904175 10.2191492 -1.3190456 3.0028825 6.0385130 8.9640485 12.3067832 5.6467445 12.8002256 13.6610551 8.8794053 6.2882903 2.1403860 7.3917669 7.7577760 9.3648320 8.3462961 13.4055273 1.4883093 10.5474664 14.3719403 3.5878450 10.5607310 11.5274300 7.7470496 6.2583889 2.2659169 11.6377411 8.4071785 -1.3190456 6.0560004 NA 1.4883093 8.9371690 10.6682242 9.6351565 10.4483171 8.9229432 9.5225245 -0.3190456 10.1264924 9.2901389 7.0163503 7.6028013 0.2659169 11.1927129 13.9870931 7.3783105 11.0407097 10.3826998 9.2355490 1.0028825 0.6809544 6.9617310 8.3066692 11.4352214 NA 4.1072275 7.7226190 9.8676934 11.7316591 7.8806323 4.2659244 4.6351565 9.5225245 11.9302218 2.1403860 14.0200795 7.9454029 6.8357788 11.6386064 12.8648281 12.1480562 8.9277006 10.9220496 10.2701431 9.4182075 9.8211509 2.6809544 9.6116975 11.8094379 10.2341094 -1.3190456 10.3445183 9.0754230 -1.3190456 1.1638207 8.3248165 10.5810722 9.5311471 8.9371690 16.0497480 10.0646645 9.3604402 8.6639537 -1.3190456 15.9556932 8.8521368 13.2126462 10.3770583 10.1597298 9.1249396 7.8732528 10.6902045 -0.404950 0.935080 0.935080 0.332700 0.318350 -0.434200 0.457340 -0.057958 -0.054420 0.836080 0.836080 0.836080 0.219450 0.219450 0.515940 3.656900 -0.437450 0.692600 0.677590 -0.445230 0.062365 -0.446090 0.492510 0.492510 0.492510 -0.229200 -0.229200 -0.229200 0.493380 -0.420250 -0.404950 -0.417940 0.332700 -0.434200 -0.434200 0.457340 0.457340 -0.066399 -0.054420 -0.056173 0.036653 0.036653 0.836080 -0.460390 -0.448720 -0.448720 -0.449100 0.219450 0.219450 0.515940 -0.454150 0.692600 0.677590 0.677590 -0.445230 0.062365 -0.446090 -0.452330 -0.476170 0.492510 -0.435180 -0.229200 -0.229200 0.502660 0.402440 -0.467700 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.449 -0.449 0.000 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.449 -0.449 0.000 7.4122794 12.5460168 3.9663659 9.3075818 2.2659169 10.6109583 0.2659169 NA 8.9938430 7.3952059 NA 5.7577753 5.9938442 10.1768152 9.3674606 1.6809544 7.1607407 8.6116977 9.5366074 12.0949847 8.3898718 5.7999007 9.3030119 0.2659169 9.3753182 9.5225245 4.8508844 0.2659169 10.9709790 1.6809544 13.1391104 12.5404950 6.5138507 9.8964932 8.5090968 9.7185072 1.2659169 1.2659169 2.3813941 7.5998236 10.0157921 11.1231261 9.5303654 1.2659169 9.6442320 8.3391717 10.1444845 5.1072234 9.8515112 NA 10.5330995 1.4883093 2.1403860 10.1415850 6.3091507 2.3813941 8.3969220 7.0296881 7.4947412 2.1403860 14.7182497 -1.3190456 10.1986296 0.6809544 7.1847861 3.7684278 8.1009204 9.2365079 15.211731 5.725354 8.402060 12.800226 9.781622 11.446661 13.405527 10.884002 8.529317 10.725696 13.100723 8.972131 8.306669 9.968095 -1.319046 7.878177 11.036036 9.9007337 8.0429042 8.1627594 9.5459201 9.0829064 9.2003705 5.0028870 3.0732718 11.7973041 7.8508850 2.3813941 2.9288819 6.7618849 8.4834764 9.4491445 9.7342073 10.3696476 9.3604402 3.8102477 9.6351565 10.8278470 11.0540972 8.6087383 10.0945881 6.8855317 2.5878450 8.3672155 7.3066687 3.0028825 11.7316591 5.6116977 9.5319284 9.5225245 6.4491437 13.2029286 10.4097310 9.8319767 12.7953532 9.9652059 8.2451096 0.2659169 TCGA-E2-A14P 79 0 NA 1246 breast stage iiic t2 n3 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 10 white not hispanic or latino 93.58.0 6 3 1 NA 1 5 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.334947e-06 6.118507e-07 12.6146008 6.8142300 8.3398001 11.0913152 NA 10.1206733 NA 9.4145138 12.1410278 8.7804666 9.1925446 7.7566197 9.0753382 9.8365194 7.6513474 9.3380156 10.1463905 11.7325420 6.4807046 3.6340007 9.8947303 10.5023750 16.0151422 10.7190659 9.3424725 11.8892575 6.3871626 10.9202974 -0.3201259 2.9277258 8.2286263 11.2116730 12.4601389 7.6134948 17.4550153 11.8487896 9.9407237 7.0548441 4.6105406 5.0017302 8.3819768 6.9744249 6.2189632 13.0853446 NA 10.0124002 12.2830828 5.7458934 10.1321741 10.7354255 9.5174322 7.2382251 2.5866927 13.7661838 9.3027712 -1.3201259 9.9283247 0.2647166 4.2945105 9.8696287 10.5342830 9.9471761 10.0067954 10.2713266 9.7632836 1.8497191 10.5605357 9.9128245 7.3127995 6.3018565 12.4459189 10.4975873 15.0106160 7.1872818 12.1825117 10.3064258 9.2004229 5.5746223 3.3802446 7.5655005 11.3116633 11.9868626 NA 4.1060719 7.1310153 10.3023137 11.3553202 3.3802446 5.2189632 5.3663047 10.1170360 11.9337994 2.9277258 13.3914711 7.1994407 8.0395535 11.2018953 14.4343003 13.0280482 6.2343921 9.9140228 10.7589556 10.0876827 11.2748285 5.3802446 8.6237842 12.1744098 9.1524950 NA 10.3384620 7.9675168 1.0017302 4.1064070 9.6157058 11.1410278 10.2141071 10.0079181 14.7657123 9.4782760 8.0891952 7.6570840 1.8497191 13.5312116 9.2092348 12.5891348 11.5037685 9.8403059 11.0271487 7.4279966 10.4656612 -0.44221000 0.47821000 0.73910000 -0.01835300 2.11450000 1.21010000 1.30600000 -0.02630400 2.36600000 0.39828000 1.20250000 0.43733000 -0.04319500 -0.01133500 -0.00041585 1.32210000 -0.02862800 0.40577000 0.00069327 0.40040000 1.33690000 -0.02876500 0.91460000 3.65690000 3.65690000 -0.09881400 -0.08080700 -0.10145000 3.65690000 0.76389000 0.36543000 0.39131000 -0.00484610 -0.52440000 -0.01285100 -0.00221680 -0.00221680 -0.02630400 0.00332990 0.43598000 0.35202000 -0.04170200 -0.52123000 -0.02671400 -0.92503000 -0.46812000 -0.08027500 -0.01133500 -0.04414400 -0.08067400 -0.04102400 0.40577000 0.00000000 -0.06061400 -0.00498440 0.43631000 0.37693000 0.38788000 -0.05980700 0.29135000 -0.01711600 -0.10539000 -0.10145000 0.36117000 1.55810000 -0.05576900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.391 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.426 0.426 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.391 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.426 0.426 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 0.250 8.6325456 11.7572875 3.4346949 8.1102567 5.8546291 11.8180760 3.6340007 2.7672734 9.5859431 7.1392362 0.2647166 6.9605754 3.0721230 11.1193754 8.7485823 1.6797841 9.0285324 8.7725614 11.1994404 11.1286948 8.4898295 7.0461265 10.4153602 1.4871776 7.9182091 9.7632836 3.4871647 -1.3201259 11.4469541 1.0017302 12.8879623 12.6245162 6.4212704 9.1846232 7.1310153 9.9074201 5.6340007 2.0017302 0.2647166 6.6105421 9.0140774 9.8751765 10.6513477 4.7241973 6.9684859 6.8696284 10.0812171 6.1955031 9.1494461 NA 11.1060689 1.8497191 2.1392403 9.9278206 8.4155124 6.6398066 8.0373564 7.7672668 9.4421863 2.9277258 13.3994069 -0.3201259 12.1063310 NA 10.6459491 3.6340007 7.2033666 7.3974804 13.6863889 7.8794767 9.7974472 17.4550153 9.8403059 11.3787259 13.0853446 10.3064258 8.9500995 10.9029008 12.5911962 9.6046166 11.3116633 8.7377959 0.6797841 9.8358873 12.7270985 12.294399 5.394051 7.764613 9.396624 9.745893 10.906322 6.622318 9.346028 10.719066 4.001730 NA 8.364553 9.626491 12.188094 12.164249 7.376771 10.201895 8.217023 7.636906 9.947176 10.456237 11.717351 10.007357 9.876406 8.975573 6.309162 9.403866 7.182517 8.149446 11.355320 4.072123 10.736103 10.117036 6.719052 14.294083 11.578783 10.629631 11.366086 11.438027 9.336229 2.767273 TCGA-E2-A14Q 50 0 NA 1163 breast stage iia t2 n1mi m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 2 2 2 NA 2 1 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.39057e-07 10.534535660 7.067010498 7.663827762 11.670453550 3.052659337 9.971995547 4.315689396 9.532274096 11.242875296 7.801116611 9.706861869 7.853814176 8.917584514 9.314186236 8.178636968 9.082108315 10.456604837 9.758080604 7.206460571 1.730748629 10.507818322 10.358990683 13.703276485 10.563617481 9.717138311 10.564882372 5.023508201 10.602016694 -1.591179465 1.868212636 7.753095043 13.517650444 12.521320289 7.049044772 12.306455727 13.183380515 9.244849726 7.779486930 4.656725170 6.627967175 8.135017653 10.495930656 7.930399684 12.822361143 -0.006216965 10.468143811 13.956386758 6.129899122 9.726777074 10.607244397 7.248003443 6.001257302 -0.006216965 14.548635227 10.516343389 1.578745536 7.447718038 1.216175457 4.081228830 9.745305915 9.363722585 9.915602761 11.050173732 9.667365278 9.748092696 3.315696641 11.054232574 9.953763728 7.183586753 8.744189693 3.801117258 11.539048132 14.503227577 8.305464887 10.901153281 10.556004281 8.209698993 0.730748629 6.397484685 8.025348336 9.100542766 12.939510457 NA 4.783839017 7.433939239 9.330640186 10.109672537 7.109239355 5.254287906 4.339536494 10.394285509 11.926960697 2.315682151 13.755139920 6.835063808 7.608471441 12.443340390 11.806874937 12.939815194 8.214543037 10.320940187 10.668542614 10.175116989 11.197925393 4.315689396 8.968176309 12.294019051 11.212728608 -1.591179465 10.382855380 8.935298555 1.408820535 4.023805353 9.270661619 10.716569390 10.220976686 8.998450525 15.526381557 10.081224702 9.715430617 8.907648413 5.637618940 14.885592986 9.159506329 12.828627873 12.310326202 10.004989090 9.846031274 8.279163892 10.560548458 -0.58117000 0.59116000 0.59116000 0.01447000 0.02094900 -0.59107000 0.01458400 0.00013863 0.00013863 0.00944910 0.00944910 0.01042400 -0.00290910 -0.00290910 0.00471900 0.00471900 0.00471900 -0.57200000 -0.00027724 -0.06276400 0.02062300 -0.00733390 -0.57704000 -0.57704000 -0.00304750 -0.02644100 -0.02644100 2.90240000 0.00000000 -0.01285100 -0.58117000 -0.01285100 0.01569000 0.00583090 -0.58569000 0.01458400 0.01237600 0.00013863 0.00013863 0.00013863 -0.00069303 0.00652620 0.00944910 -0.00318590 -0.00318590 -0.00318590 -0.00318590 -0.00290910 -0.00290910 0.00471900 0.00168500 -0.57200000 -0.01092200 -0.01092200 -0.05725000 0.54930000 0.00041593 -0.58902000 -0.57704000 -0.57704000 -0.43572000 -0.02644100 -0.02862800 0.00000000 0.01140000 -0.59334000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.330640410 12.294019051 5.940180848 9.215349041 3.618250404 10.987172046 1.408820535 2.109226816 8.401737542 7.847591092 NA 7.975614711 1.730748629 10.711152691 9.507489422 2.730726895 8.553457658 9.123903340 11.107504016 10.964107404 9.781343319 9.329896326 10.255464972 -1.591179465 9.238522013 9.748092696 6.222580475 NA 10.427347313 3.163691937 12.928681252 12.323651565 7.618252607 10.046782698 8.054457803 10.325051977 4.315689396 -0.006216965 -1.591179465 3.963390889 8.342489855 9.999854032 10.525792977 4.538084922 8.276680434 6.578724406 9.628572944 5.095299961 9.791423397 -1.591179465 11.155523592 1.408820535 5.136720485 10.037627528 7.332097434 3.496257806 9.514707743 7.687248994 7.143508727 -0.006216965 14.055442408 -0.006216965 10.164104173 NA 6.753095043 6.351313836 7.986228311 8.635211683 13.387747 5.067010 7.882505 12.306456 10.410911 10.926961 12.822361 12.396774 9.415834 10.127760 13.322390 10.360448 9.100543 9.645411 NA 7.514708 11.480262 10.853555416 6.222580475 8.698818203 9.172841505 7.666187069 10.497146979 5.940180848 8.683759957 10.563617481 5.216156051 2.578721387 6.761946091 6.164019924 11.006851862 10.303617066 8.544508570 9.284548603 11.465944935 4.900654312 9.915602761 10.523517753 11.461367353 9.372418038 10.716284802 9.171181302 NA 9.539511491 6.241689577 6.357166648 10.109672537 6.095299961 10.682303522 10.394285509 7.228978340 13.536914514 10.958343401 10.751151867 12.185746336 10.796008937 9.439466477 -0.006216965 TCGA-E2-A14R 62 0 NA 1174 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 4 4 4 NA NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.671152e-06 4.162835e-07 12.7386844 1.1971105 8.0249230 11.5489264 NA 9.5502506 1.4601135 8.4065571 11.0025252 9.2621158 9.3509091 8.0070323 8.2458631 10.1355072 7.1971036 7.6098850 9.0299936 10.8581692 9.2283223 3.1971105 10.1937184 11.8718256 13.6942570 11.1749560 10.8136525 10.1869239 6.7516927 10.1914572 7.0846288 4.6565364 7.6466653 8.6115774 12.3504024 5.6030952 12.1659145 11.4620154 9.8293718 8.2523863 5.0044564 9.7977601 8.2545539 10.8627949 9.5555351 5.1971026 NA 12.3073260 7.4713655 9.4297645 9.5980942 11.0009120 7.9784634 5.5190323 2.5756270 15.3238416 12.2506414 NA 8.0325224 NA 6.7017237 9.0991774 10.4445566 8.8308254 9.7470809 10.6064946 9.9222996 3.1971105 10.2733849 10.5266759 4.6565364 6.5686630 3.2674909 12.1594214 14.8846325 6.7508945 10.1337416 10.0274604 8.4806553 3.5756149 NA 7.3549555 9.2172503 10.1703705 NA 3.2674909 6.9784634 11.3750215 10.1272497 5.1419641 6.6953550 4.9626369 8.1063970 11.9965472 0.4601659 12.9068768 4.4297632 6.6565350 10.9633013 12.6899583 12.3232919 5.2502150 10.5721431 11.0407108 10.8546008 10.3387000 2.5756270 7.8947662 11.9679328 9.6292280 NA 9.8531711 8.8395165 2.3345969 2.8451086 9.1396181 11.7713188 10.9758379 7.4297641 15.5249510 10.8954611 10.3274169 4.1605814 -0.1248490 12.0763806 7.7080658 11.6458395 10.7253624 8.9705727 9.8351775 7.5546556 10.6053442 1.333900 1.677200 0.821960 1.963800 0.997380 0.492680 -0.696220 0.000000 2.936500 -0.029175 -0.029175 3.253200 0.897880 -0.027945 -0.572990 -0.531950 1.209200 1.918200 -0.047395 1.239600 -0.564250 -0.526140 -0.488380 -0.484700 0.507410 0.936300 0.936300 -0.102760 0.154870 0.147120 1.333900 -0.557770 -0.535810 -1.203900 -1.141100 -0.656400 -0.656400 -0.579600 0.322050 0.481650 0.560630 -0.543400 1.895200 -0.030204 0.949970 -0.588140 -0.865590 -0.555670 -0.555670 -0.535710 0.059080 -0.570810 -0.030267 -0.555120 0.470840 -0.564650 -0.587660 0.717350 -0.488380 -0.484700 -1.070100 -0.280010 -0.102760 -0.625670 0.526250 2.411600 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 -0.411 0.000 -0.507 0.000 0.936 0.374 0.746 0.746 -0.451 0.143 0.588 -0.540 -0.558 -0.558 -0.578 -0.578 -0.651 -0.651 0.000 0.000 0.000 0.000 0.564 0.396 0.000 0.309 -0.553 -0.553 0.000 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 -0.411 0.000 -0.507 0.000 0.936 0.374 0.746 0.746 -0.451 0.143 0.588 -0.540 -0.558 -0.558 -0.578 -0.578 -0.651 -0.651 0.000 0.000 0.000 0.000 0.564 0.396 0.000 0.309 -0.553 -0.553 0.000 8.4601380 13.0736974 -0.1248490 8.1466384 3.7346446 10.1840834 -0.1248490 6.0943438 9.5127061 8.2866867 -1.1246917 6.4450314 1.8751903 10.0108849 10.1372704 2.5756270 7.9599840 9.5422871 8.2194716 10.4746236 7.6337320 7.1183493 10.8556722 0.4601659 9.1349189 9.9222996 2.9626416 NA 10.7382003 1.1971105 14.1471857 12.7308228 6.5118001 10.1937184 11.3343511 10.3232919 2.7820730 2.3345969 -0.1248490 8.1489712 9.4478759 9.6985429 10.9164925 8.9915196 9.2122846 7.9493172 10.6275562 5.8409592 10.2664191 3.1971105 12.8900679 1.6825284 3.3987334 10.4299083 7.4184008 7.4182077 8.9797744 7.9439541 10.8427621 7.3948116 13.7603477 0.4601659 11.1763860 -1.1246917 9.4825059 5.4750881 8.2631927 8.4917245 9.0932424 9.2513011 9.1846520 12.1659145 11.1135804 11.3040592 5.1971026 10.2829744 9.5136115 11.3178600 13.4881017 10.8563861 9.2172503 8.9652879 0.4601659 8.4825059 11.3712804 9.440278 5.840959 9.248041 8.641705 4.575615 9.048141 6.589420 4.962637 11.174956 10.699737 -1.124692 7.981084 10.400481 10.839877 10.423034 7.843843 9.754759 7.165194 8.328446 8.830825 9.782066 11.574097 10.367530 10.250215 8.146638 NA 9.180417 7.322259 9.024923 10.127250 4.267491 10.782885 8.106397 8.074848 15.442181 11.188626 11.372029 12.629750 10.818789 8.500884 3.460140 TCGA-E2-A14S 65 0 NA 1009 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 93.58.0 3 1 1 NA 2 4 1 1 3 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.668684e-07 10.9313194 4.2904465 6.8943643 11.1931295 -0.6868703 10.5643499 0.8980922 10.4187445 11.7157758 11.6978122 10.1341401 7.2556782 7.9908828 8.6237762 7.9660082 8.7715700 10.4118534 9.3805976 6.9784988 0.6350578 11.2183623 8.8494104 13.0588902 11.9185271 8.9084208 10.3152751 5.8288626 10.6854843 NA 1.6351043 7.5371648 10.3602872 13.0733115 7.9315489 12.6812605 13.0785012 10.1707557 6.3630116 2.1205178 5.8523210 8.8610218 11.3002497 5.2200552 13.4544722 3.4424526 10.0118681 14.4225247 6.0136029 9.1531545 11.3014930 8.0256905 7.2731652 NA 12.8488215 10.2893695 1.1205510 7.5846266 -1.6868703 4.2200513 9.3011379 10.1128497 9.7888968 11.2455627 9.8667927 10.0346898 -1.6868703 10.9644394 10.1401090 7.1988595 6.8169887 -1.6868703 11.9506939 14.6708356 8.7259027 10.6146595 11.2117648 8.2760592 -0.1019078 NA 8.1773493 8.4730348 11.9891204 0.8980922 4.4006267 6.8050164 11.2303489 10.6737362 3.1711428 6.7684900 4.5226145 10.8313247 12.2141245 2.8367321 13.1835281 5.5515683 7.8229385 10.8015056 10.3969750 12.5934267 8.1043262 10.1031044 10.6654827 10.3229919 11.0724274 4.1460523 8.3369176 11.8358675 12.3865518 -1.6868703 10.1444706 10.2234314 -0.1019078 5.8501493 9.8924792 9.6020294 10.1193101 9.8920077 15.2144545 9.9493347 11.0640797 9.2666324 3.2200513 16.3315918 7.5079199 12.2045674 10.9065545 10.1781233 8.9633175 8.2990051 9.5373159 0.0000000 -0.0078588 -0.0073339 0.0038854 -0.0254140 0.6627500 0.7432800 -0.0106460 -0.8269200 -0.8225200 2.2442000 3.3284000 0.0101460 0.0101460 -0.0012473 2.8950000 2.1817000 0.0188030 -0.0111210 -0.0262290 0.0126550 0.0319990 0.0475520 0.0475520 0.0475520 0.0692390 0.0692390 0.0692390 3.6569000 0.0000000 0.0000000 -0.0128510 0.0038854 0.7150900 0.6421300 0.7178300 0.7178300 -0.0106460 -0.8269200 -0.0253460 -0.0152330 0.0026454 -0.8619800 -0.0081185 -0.0081185 -0.0081185 0.0476940 0.0101460 0.0181030 -0.0012473 -0.8191700 0.0188030 -0.0111210 0.0225850 -0.0262290 0.0126550 0.0282730 -0.7902300 -0.7781000 0.0475520 0.0061090 0.0692390 0.0692390 0.0181030 0.0146090 0.8341200 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 8.3018483 10.9482012 6.9996641 9.7746428 2.5527213 10.3219421 1.4831063 -1.6868703 8.5286963 6.3187886 NA 6.1887589 1.3131878 10.3657314 9.1889127 3.9570231 6.8209576 9.0282675 7.3953122 9.9660083 9.6898313 7.8030113 10.5045310 4.3355333 8.7797496 10.0346898 2.4830805 -0.6868703 10.3427957 4.4830870 12.3062786 12.4757907 7.3410695 10.7238797 8.4730348 9.3899789 0.8980922 1.3131878 -0.1019078 5.6882027 8.4705104 10.2886531 10.3011379 3.5226208 6.0905168 7.0747141 9.5610909 5.9425192 9.5299092 -1.6868703 10.6865723 0.8980922 4.4424459 9.9577452 5.1764824 4.4830870 9.1835280 8.0049070 5.8050164 NA 14.1254409 -0.6868703 10.0308398 NA 7.8792175 5.6260477 8.0376771 8.9713748 14.789758 5.379254 9.098616 12.681261 10.175413 10.478384 13.454472 12.962532 10.352723 10.042359 12.242977 10.896011 8.473035 9.052944 2.013605 7.276059 11.972379 10.694706 7.726791 8.656349 9.076376 9.155514 10.059787 6.898126 4.852324 11.918527 5.999664 NA 6.621502 7.742821 8.500515 10.518040 10.132544 9.397972 11.552016 5.589287 9.788897 10.531121 11.896716 9.204947 10.491206 7.790922 -1.686870 8.173288 6.171145 4.522614 10.673736 4.635093 11.074650 10.831325 7.041084 14.225023 10.522617 9.860540 11.800878 10.095752 10.174250 2.220051 TCGA-E2-A14T 52 0 NA 1013 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 3 1 1 NA 3 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 11.8519505 5.8021286 7.7447000 11.0493150 -1.8772610 10.5978752 1.2925462 10.2438581 12.1996309 10.6817864 9.6738760 7.6867981 9.4927909 9.1786086 7.1056425 9.0761173 10.6170040 10.4663893 7.1254631 2.5149554 10.3634397 9.2187047 14.9190176 10.9687263 8.8343152 11.0664452 4.7373569 10.2318261 NA 3.3321064 7.8825367 11.8329167 12.8221124 8.5520550 13.2328462 12.5326359 9.4247160 5.3800367 -0.8772610 5.4624974 8.5405008 10.0091071 7.3823914 13.0868538 2.3705828 10.6647130 14.4547199 0.1226065 9.6043066 11.9681384 9.4823980 8.9736164 0.9300182 13.3597567 7.8908327 2.7665104 6.5572768 NA 3.0768498 9.0377808 10.0742974 9.5754044 8.8300074 9.2147448 9.5192531 2.1226396 11.4261438 10.0822881 5.9235486 7.6925039 -0.8772610 10.7190711 14.6746419 8.8317838 10.9642127 11.4387885 7.6004065 1.2925462 5.8368936 7.3776773 8.4998590 10.1762349 -0.8772610 5.8161363 8.1268686 9.9852857 10.5476019 4.0533894 5.1779297 5.7151054 9.6925039 11.8518442 5.4976890 13.9348508 5.4535637 7.3223203 11.3044218 10.6069678 12.6599881 8.1296756 10.6532986 11.1357966 10.7153483 11.1818238 4.7808612 8.2480618 12.1203571 11.3573161 -0.8772610 10.3873842 8.5593599 -0.2924752 5.7662162 9.3888493 10.5208576 10.5031095 9.2363905 15.5707889 9.8390392 9.7941894 8.2799954 2.3705828 15.3197979 7.2311732 10.7741486 9.9495940 10.7181390 9.5681805 8.4524447 10.7799758 -0.3950800 0.5176900 0.5176900 0.2367400 -0.1695500 -0.0102320 0.6106300 0.0000000 0.4626300 0.2632600 -0.2567300 0.9878300 -0.4148200 -0.4148200 -0.0171160 -0.0171160 -0.0171160 0.0130740 1.7641000 0.3614000 -0.0076101 0.6226000 -0.4181600 0.4252100 1.7056000 -0.0015243 0.0077783 0.0052715 0.4031100 0.0172640 -0.4246200 0.0061090 0.2217800 -0.0102320 -0.0102320 0.5063700 0.3951800 0.0000000 -0.4152700 -0.4237500 0.4230100 0.4230100 -0.8557500 -0.4390800 -0.4073800 0.0134920 0.0134920 -0.4148200 -0.4148200 -0.0171160 -0.0183530 0.0076649 -0.2809600 -0.2809600 -0.4586400 -0.4139500 -0.0228810 0.1887400 -0.4219000 0.4252100 0.3204400 0.0150280 0.0077783 0.4031100 0.4474800 -0.3697400 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.425 0.000 0.000 0.000 0.371 0.789 0.335 0.335 0.000 0.000 0.000 0.500 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.506 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.425 0.000 0.000 0.000 0.371 0.789 0.335 0.335 0.000 0.000 0.000 0.500 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.506 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 7.7262747 11.7031425 5.7151054 8.6569514 3.8505694 10.1522807 1.7076131 -0.2924752 8.6848910 6.5983816 -0.8772610 6.4845925 2.2101083 10.6941641 8.9340231 2.6462087 7.8708412 8.8003680 5.2311712 9.9060558 10.1114183 7.3823914 10.3640357 1.1226727 9.1752164 9.5192531 3.1670367 3.1226562 12.4326931 3.3321064 12.6348950 12.2379359 6.4355319 10.7071412 7.0768445 9.2717604 6.5779756 2.5149554 NA 7.8403247 8.3906054 10.0238924 9.9763477 5.1113318 10.5742459 6.5447126 10.0003160 3.7950708 10.7481289 NA 9.2107741 0.9300182 3.2519311 10.1315427 7.2069518 4.3894360 9.3711690 8.7862066 6.2622001 NA 13.3974633 -0.8772610 11.4851402 NA 8.6991327 4.1670448 7.9852858 8.0666285 14.433777 6.700078 9.321093 13.232846 10.640524 10.744013 13.086854 14.997414 8.838610 10.322627 12.582976 11.166701 8.499859 8.423001 1.582074 8.268580 11.783981 11.0276592 7.5882147 8.5031094 8.5851507 9.4982309 10.7226936 3.9555360 9.6398256 10.9687263 7.2363902 NA 5.3025567 8.0434774 9.5368051 9.6579238 8.5468146 9.9134041 9.8582044 3.8775381 9.5754044 10.2853544 11.1192984 8.9064652 10.6479244 9.6417931 -0.8772610 9.6341638 6.8974353 5.6145008 10.5476019 5.5489144 11.2910071 9.6925039 7.0022311 13.2254853 10.5389181 9.9219300 12.5517281 9.8492923 9.6383483 -0.2924752 TCGA-E2-A14U 74 0 NA 1318 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.39057e-07 11.27581617 7.29526844 7.30098213 11.92739824 -0.09711604 10.08203085 0.31799862 9.05523606 11.67003204 12.13427232 9.71993465 7.54921017 9.45177304 9.99834813 8.15561669 9.17519198 11.35209977 9.37733310 7.72949975 0.31799862 11.66547156 11.03309264 13.60613373 11.28124595 9.26854457 10.57861413 4.07287755 10.03651295 -0.68200138 4.27218746 6.66228384 13.30822556 12.95143797 7.50534077 13.80987301 13.18314191 10.25683305 6.96184439 3.93269429 6.74844111 8.97441344 9.99922702 8.87065785 12.36391886 4.72738138 10.99350468 13.20701717 7.33200879 9.97661510 10.88237634 8.30098213 5.07287755 NA 13.62507056 8.04250262 3.01842053 8.43692970 -0.68200138 2.77743024 9.94187013 9.21356382 9.75574068 11.47249031 9.94552255 10.90623477 2.40544784 11.21772317 10.62319536 7.57773169 7.04930730 9.17207767 12.27717553 14.58939692 7.58849428 11.37902220 10.72445937 7.65114428 3.93269429 3.27218746 8.35553566 8.34727588 12.11209981 -0.68200138 2.90294183 7.34312796 8.99129763 10.52866000 10.42193206 4.48791076 4.12534527 9.66505623 11.62490473 3.31798415 13.12614839 6.42127717 7.76093214 13.07876052 12.25361411 12.62055615 8.52987676 10.77177369 10.68567634 10.69536185 10.94415391 4.79372425 9.12211954 11.25020336 11.29669904 2.22487378 10.30702829 9.13736929 2.12535354 4.79938266 9.66339390 10.97530704 9.90342065 8.89918923 14.87268237 10.45849889 9.34520341 9.05439051 4.90295147 16.02598126 9.97083353 13.71726654 13.20625620 10.12453829 10.22600582 7.63313837 10.20530062 0.00527490 0.00527490 0.00527490 -0.00166290 -0.01050800 -0.00124730 -0.00041585 0.00221930 0.00221930 -0.16268000 0.22503000 0.23349000 -0.00595220 -0.00595220 -0.00857660 -0.00857660 -0.00857660 0.00041593 0.00041593 -0.00138580 0.00736090 -0.01174900 0.00805670 0.00805670 0.00805670 0.00471900 0.00471900 0.00471900 -0.00360110 0.00527490 0.00527490 0.00000000 -0.00166290 -0.00124730 -0.00124730 -0.00041585 -0.00041585 0.00221930 0.00221930 0.00221930 -0.00249380 -0.00249380 -0.16268000 0.00180300 0.00180300 0.00180300 0.00694350 -0.00595220 -0.00595220 -0.00857660 -0.00857660 0.00041593 0.00041593 0.00041593 -0.00138580 0.00736090 -0.01174900 -0.16001000 0.00805670 0.00805670 0.00360760 0.00471900 0.00471900 -0.00360110 -0.00136980 -0.01312700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 7.8058283 11.7198015 7.3867670 10.2450258 2.6846617 11.0227569 2.4879236 1.7774092 9.0467595 7.7505308 -0.6820014 6.5941126 2.9029418 9.5389715 9.7845750 1.9029611 8.0911280 9.0870000 10.7617092 11.2710938 9.5716233 7.6331384 11.2568331 2.1253535 10.5139760 10.9062348 9.5824312 NA 10.3817207 5.8098414 12.9113797 11.9503023 7.0009836 10.2124274 6.2952694 9.5010036 5.3179878 1.1253205 -1.6822329 2.5659139 9.8108433 10.2290060 9.9658967 5.2487246 9.2796916 7.4291247 10.5489097 5.1381673 9.7763952 NA 12.0381260 3.2248738 4.1508764 9.7668999 6.2765413 2.1253535 8.3705566 7.3009821 6.6080079 -1.6822329 13.9955706 -1.6822329 10.8595693 NA 8.4562604 4.7273814 7.6376610 8.7987789 12.165272 4.045906 8.670032 13.809873 10.283412 10.012346 12.363919 12.622269 9.081085 10.336884 13.278760 11.968255 8.347276 8.233868 2.018421 8.037377 11.194122 11.1107789 7.6511443 8.9455226 9.4690052 7.0594559 10.7993768 6.0390879 8.3486556 11.2812459 5.6578372 0.6398804 9.5617576 5.8236424 11.6418878 10.2844940 8.1650462 9.4891654 11.0465469 3.4879108 9.7557407 10.5990493 11.5112060 9.9400405 10.4463052 8.4715407 NA 9.7614191 6.1308073 5.8018053 10.5286600 4.7103050 11.3719145 9.6650562 6.9509839 14.3745628 10.0836891 10.3807094 12.6062779 10.9493930 9.9979085 0.6398804 TCGA-E2-A14V 53 0 NA 1042 breast stage iib t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 93.58.0 6 3 1 NA 3 2 1 2 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803895e-06 3.815932e-07 12.52810030 3.95348875 10.46901872 11.25687880 0.39889757 10.03325504 1.85833914 10.16252514 11.22027318 8.62651361 10.28192284 7.19979796 8.56756978 10.01774212 6.81675073 9.14876713 9.60896019 10.14078607 7.32073828 0.72080378 9.81146766 10.11914202 14.40089966 11.55624475 9.46700430 10.77121873 4.35309741 10.68834037 0.72080378 1.98386007 6.74319314 13.06489982 12.45587414 6.29371625 16.20425752 12.83827420 9.45553559 5.77393832 3.82516487 5.56882257 9.41709807 8.93611612 8.51524173 12.96078237 2.48635398 10.89050042 13.34168718 3.95348875 9.50415160 11.09151327 6.94579262 5.96113942 0.39889757 13.57336672 9.90421312 2.09932887 7.51003384 -1.60121185 3.04274938 10.03733376 10.98479923 9.77881768 11.18455461 9.25843248 9.80510282 -0.01610346 11.28364072 10.25142726 4.98386007 7.42403776 5.46498839 9.76467341 14.61291329 8.03456129 11.26906986 11.37295384 9.19817932 1.72084755 4.82516487 7.99135461 8.87665599 11.48337404 -1.60121185 5.15378507 7.48901059 11.01360762 11.23672280 4.85832919 4.89075310 4.28154248 10.34580407 12.28849682 5.87463223 13.76419500 5.37617923 7.82096266 11.92074359 13.52580389 12.64222055 8.54610269 10.36864407 11.04905199 10.38010830 10.69093175 4.93805521 8.64088081 12.16480544 11.49890304 -0.60099301 10.23376382 9.33258845 1.72084755 3.10099446 9.30578839 11.04072377 10.36936320 9.58995707 14.92695504 9.73149384 10.04680588 8.34141252 0.98389654 15.56393235 9.38829223 12.25872372 12.93726863 9.81146766 8.86752185 8.51783904 10.63401753 -0.343540 -0.227970 0.784120 -0.348470 0.105410 -0.057385 0.035383 0.021884 3.656900 -0.370080 -0.401410 0.354630 1.335000 0.024969 0.298830 3.108500 0.016985 0.063223 0.461780 0.044259 0.842180 -0.126810 -0.365440 3.656900 3.656900 -0.038850 -0.038850 -0.038850 1.028300 -0.343540 -0.343540 -0.089302 -0.348470 -0.057385 -0.082535 0.035383 0.035383 0.011400 -0.060614 -0.356460 0.382210 0.242640 0.364770 -0.013953 -0.013953 -0.013953 -0.013953 0.028622 0.028622 0.298830 -0.362380 0.063223 0.104240 0.104240 -0.308740 -0.278100 -0.126810 -0.373240 -0.395080 -0.388840 -0.478180 -0.038850 -0.038850 0.701200 0.013632 -0.226500 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.332 0.000 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.332 0.000 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 7.8726035 13.1314362 8.1437317 9.2246517 2.8602875 11.2226631 0.9838965 1.3988976 8.8262107 7.1062572 NA 8.9132075 3.9224643 10.2834499 9.1777962 5.3530939 7.3177608 10.2884017 9.2959870 9.9749097 9.1146882 7.7117805 10.0695541 0.1301401 7.6633403 9.8051028 2.2062681 0.3988976 11.6020929 3.4863668 12.4755464 12.3029679 7.2967428 10.5719503 6.8335264 9.5812921 8.1900607 1.5688104 NA 8.1769749 8.3747456 8.1079818 10.6512675 3.0993457 8.5170733 7.0209499 10.0468059 6.8418411 9.1369901 -1.6012119 10.5480098 2.2062681 4.0136052 9.7919075 6.6359169 2.4863540 8.9791565 6.1268180 4.5281837 -1.6012119 13.9432586 0.9838965 10.3872275 0.3988976 6.9573180 2.8583391 8.4240373 6.9838601 13.977452 7.358900 8.492976 16.204258 9.934231 11.046131 12.960782 12.015562 9.119142 11.100854 12.559872 11.206655 8.876656 9.807758 2.486354 11.513291 12.529951 11.061344 6.311786 8.981980 8.668024 9.447385 10.477479 4.568823 4.013605 11.556245 5.206252 2.922464 5.914598 8.769498 11.079697 10.169975 6.922460 9.276182 10.469690 4.665683 9.778818 9.958275 10.695527 9.472370 10.769313 9.448746 -0.600993 8.509590 7.725844 4.180259 11.236723 6.812525 10.426113 10.345804 7.379038 13.621089 10.017742 10.108412 12.295230 11.142470 9.226240 -1.601212 TCGA-E2-A14W 78 0 NA 974 breast stage iia t2 n0 m0 2-10-2014 male 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 3 1 1 NA 2 4 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838585e-06 4.509738e-07 10.88730166 2.84546998 7.26948672 11.22599323 NA 10.12530265 2.52353687 9.92867337 11.52798645 9.04839996 10.20007676 7.19123494 9.26612195 9.51505383 8.65453149 8.95676963 10.24292078 9.88693662 6.50842548 NA 10.79849238 8.99113745 13.19470435 10.82655151 9.48160127 10.33570923 1.52351177 10.22339347 NA -0.06145073 5.66648961 9.66223043 13.11138753 10.13271062 12.90795592 12.43629653 9.20886471 4.55328062 NA 8.60390521 8.68340311 7.05231155 7.35219707 13.40260456 3.33088820 10.64463368 14.00293326 6.32227430 9.60123780 11.33784732 6.46995108 5.06785380 0.93854927 12.37142053 7.28729775 3.74592570 6.91584951 NA 0.93854927 8.56062134 10.28619075 9.65966862 10.03000481 9.20652650 8.95676963 NA 10.61011046 9.49603305 3.63901215 6.61804920 3.10849100 11.50557479 13.11450874 6.15802795 9.78013372 11.00969652 9.72728778 1.93858691 6.25145211 8.85295453 8.13332617 10.21411193 1.26050748 5.71992815 6.93856927 9.61716953 11.28175510 4.77145778 3.46213087 4.06785380 9.74511899 11.83168129 2.10849100 12.96604350 5.38151180 7.21003228 11.63640575 12.69522997 12.51941681 9.26162413 10.87336598 11.22049943 10.56336485 10.60523726 2.26050748 9.23319016 12.36706042 11.24605483 2.10849100 10.12839394 8.97474296 NA 2.06949595 8.37111144 10.52447080 10.03066576 9.41733904 15.92078315 11.57632632 10.40617492 6.27841972 -1.06130019 15.79399758 8.58422782 11.38306671 10.30489156 9.81891813 8.98705619 7.56792566 9.56253322 -0.00026500 -0.00026500 -0.10892000 0.03807700 0.01601800 -0.02464900 0.06724400 -0.00012639 -0.06768800 0.03751200 0.03751200 0.11051000 0.04827400 0.03018200 0.02203600 0.04941000 0.04941000 -0.00497220 2.19800000 0.02203600 -0.00732170 0.69374000 -0.64235000 0.65536000 1.29870000 -0.00541230 0.08422200 0.03807700 0.06968200 0.11595000 -0.00026500 0.06767400 -0.65444000 0.05766600 -0.00657110 -0.00711800 -0.00711800 -0.68687000 -0.00012639 0.59495000 0.36057000 -0.36951000 -0.65640000 -0.67688000 -0.67472000 -0.67472000 -0.65173000 0.03018200 -0.63877000 0.02203600 0.04941000 -0.00497220 0.01797600 0.01797600 -0.67664000 -0.66481000 -0.65844000 -0.63433000 -0.64235000 0.65536000 0.68256000 -0.00541230 0.02609900 0.06968200 -0.03202800 -0.64339000 0.000 0.000 0.000 0.000 1.766 1.766 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 0.000 0.000 0.000 0.000 1.766 1.766 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 6.78405896 11.64117502 7.32227340 8.91441742 -1.26222672 10.64679116 -0.06145073 NA 8.89421935 7.25145211 NA 6.32227430 5.27841972 11.08450155 9.23892201 1.52351177 5.26049619 8.95398454 4.26049995 12.47966602 9.59791418 6.09844061 9.88985406 NA 8.25371892 8.95676963 -1.06130019 NA 10.97542986 1.93858691 12.89231116 13.04308626 5.36483503 10.12653993 6.99926494 10.07106919 2.84546998 1.74592570 -1.06130019 7.39389665 8.50842509 9.33088686 9.74270050 -0.06145073 8.94559658 5.74592301 9.82350306 6.32227430 10.80584816 NA 12.48618695 NA 2.74592570 10.35123454 7.55213803 NA 9.27060603 5.73298548 8.19359780 NA 13.95607380 -1.06130019 10.16919032 0.93854927 9.59945672 2.84546998 9.63814191 9.66223043 14.001621 6.881083 9.775409 12.907956 9.921563 9.749944 13.402605 13.222020 9.347632 9.927964 11.993343 10.889125 8.133326 8.705098 NA 8.479666 11.633580 9.81585350 5.06785380 9.36692955 9.03132654 8.83187091 8.49388706 3.98296620 0.93854927 10.82655151 7.88401296 2.93856809 5.08831548 6.37261436 10.84433245 9.32227362 9.05491331 9.42942034 9.01271085 -1.06130019 9.65966862 10.88401326 11.98586374 8.41430300 9.33517416 7.78091962 4.26049995 8.74328135 7.27221639 -0.06145073 11.28175510 7.18174363 10.03198703 9.74511899 6.97748830 13.95633475 11.18174338 10.95468125 12.44574462 10.56382165 8.37943859 -0.06145073 TCGA-E2-A14X 55 0 NA 972 breast stage iiia t2 n2 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 5 black or african american not hispanic or latino 85.58.0 4 4 4 NA 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 12.767042270 7.262370200 7.116868955 11.387827785 -2.002310161 10.905381664 NA 10.128498209 11.893218888 7.137478932 9.868677661 8.302849087 9.011948143 9.873293068 6.250592139 8.462473234 10.429947415 10.748843928 8.981633778 4.226747418 10.331921486 12.501070089 13.480641053 11.285639990 9.830026462 11.002674747 7.507702685 10.890470405 7.137478932 3.552512333 8.854353221 12.399340497 12.724837571 5.910816593 11.984036301 13.009722685 7.912312742 6.403068281 3.582893154 5.746119247 9.639979333 9.138757396 6.989448999 6.980920992 -1.002021188 11.530527044 8.574411878 8.081406741 9.058150600 11.480735582 7.686177636 6.752815480 0.805292456 14.407871886 8.980921278 3.042329151 9.872524832 -2.002310161 6.919769108 9.940808654 10.003902954 9.364249803 10.608952433 10.470364612 9.934565595 9.101871174 11.855811435 11.293840035 5.187751914 7.467569686 1.457384163 11.601206226 15.372602048 8.321556553 10.976995507 10.350798661 10.119784906 -0.002021188 -1.002021188 8.277538019 9.357677135 10.931618280 1.457384163 3.127204039 6.457359536 10.951942157 10.416043794 4.207377511 7.463494129 4.904816433 8.798827530 11.787053666 0.997906574 13.416175555 4.656141660 7.455308313 11.385002512 13.494375731 12.465151035 7.238719041 11.637494416 11.565051845 10.619588073 11.853088104 4.843416098 7.915299795 11.629559439 9.781744436 -1.002021188 10.206162000 11.097932828 3.457357894 3.907457944 10.792952609 9.131069821 11.044028481 9.183422497 15.369857366 9.825667189 11.153220199 7.150212364 5.544822281 13.586525149 9.304558954 13.165149733 11.443847747 9.958653628 9.306266569 8.247041218 10.070013309 0.780250 0.780250 0.937520 -0.020412 -0.051991 -0.052126 -0.051316 0.993770 0.935230 -0.646590 1.850900 2.358700 -0.044957 -0.065963 -0.377690 0.327850 0.327850 -0.042772 -0.042772 0.641580 0.051530 0.018383 -0.332600 -0.332600 -0.332600 0.324790 0.324790 0.324790 0.458710 0.322700 0.780250 -0.349850 -0.020412 -0.052126 -0.052126 -0.071073 -0.071073 0.993770 0.935230 0.973370 -0.030677 -0.022469 -0.649210 0.255700 0.255700 -0.360450 -0.353270 -0.065963 -0.065963 -0.377690 0.289450 -0.042772 -0.023566 -0.023566 -0.701090 0.051530 -0.011453 0.243110 -0.332600 -0.332600 0.279160 0.324790 0.324790 0.134330 1.080800 0.735680 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 9.8268575 12.9584726 3.7258502 9.4199924 5.1057200 11.3507987 4.4897805 3.6126356 8.1988261 8.4907823 -1.0020212 7.5734669 3.9521285 10.4244545 9.8232840 0.9979066 10.0105522 11.3042742 5.9286640 8.1400347 9.2444128 7.8512374 10.8457680 2.5828932 10.0840639 9.9345656 4.5677827 -2.0023102 10.3144920 3.3198491 13.3860122 13.2124744 7.2170959 11.2756509 8.8767450 9.1188134 2.5214780 0.3198491 NA -2.0023102 8.4877757 9.6057203 9.4902815 4.4073188 9.5990948 7.1603192 9.6543525 7.3400023 10.5236931 1.3198491 12.6840451 2.7528128 2.9979246 10.1177053 6.1043597 9.3170352 10.0491366 8.3433328 10.4563342 8.5791281 14.1087779 1.9979427 11.0067064 -0.4171550 9.0504957 5.2073814 8.4126130 8.9426397 9.054159 8.242291 8.722441 11.984036 10.838312 11.748530 6.980921 11.303134 9.320909 10.969112 13.301387 11.838902 9.357677 9.339447 1.997943 7.155275 11.575474 10.127211 7.525405 9.580065 9.369704 8.748635 9.424035 7.582890 7.838705 11.285640 9.277538 3.283329 9.584767 9.660850 12.669413 11.177681 9.195759 8.241102 9.360967 9.757816 9.364250 10.287946 13.242217 11.374324 10.098261 9.728398 7.278698 9.660048 9.336385 10.472141 10.416044 5.698369 10.733907 8.798828 7.979552 14.840708 10.659260 10.595282 12.074326 10.680922 9.091345 4.904816 TCGA-E2-A14Y 35 0 NA 870 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 4 4 4 NA 1 5 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.840393e-07 1.946798e-07 10.9604282 0.0824301 6.4222280 10.9885163 NA 9.6195957 NA 9.8305702 12.0731904 9.0963979 9.6924793 6.0596581 7.8102979 9.7600970 8.1130446 8.8238442 10.2820496 10.4093684 8.3677795 3.6673358 10.0019856 10.6215361 12.2759027 10.3608268 9.6776347 10.2573030 2.7828069 10.3123978 3.9403547 2.0823620 6.2918301 10.9684549 12.2265575 6.3677799 16.6989692 11.4614849 9.2942655 3.0823790 NA 6.1158011 8.3815853 7.0307444 8.2597969 9.0116357 NA 9.6757685 9.4885823 5.4399289 9.4843235 11.7662492 5.8372646 7.0423795 1.0823620 13.7139824 7.3631483 1.6673472 7.6331238 -0.9175699 4.4399289 8.9231551 10.8917435 8.9952666 10.0589415 8.7226221 10.8293114 0.6673018 10.9500422 10.2422487 4.6059387 6.7044294 NA 9.4399293 14.5797302 6.6928121 10.1625287 9.7512624 8.9937692 -0.9175699 NA 7.5418091 8.8604545 10.8905371 0.0824301 3.8897364 7.6098547 10.1954683 11.5916574 8.7044290 6.1591932 4.3677764 7.8472491 12.1877948 0.0824301 13.7640550 3.7828174 6.3677799 12.1741433 13.1369816 12.4570093 4.5742287 10.6804298 11.3983759 10.4305522 11.2703479 4.1480393 8.5315261 11.6892451 10.1685136 NA 9.9025563 9.4388293 7.3397654 0.0824301 9.6427101 10.7675641 9.9081311 9.0922059 15.2281105 10.3596647 9.4497920 6.8702796 0.0824301 12.3409433 10.2346621 14.1895535 11.1797511 9.8077436 9.3075847 7.9152675 9.8240297 -0.6729700 0.6847700 0.5936100 0.0196430 0.0051359 -0.0178030 1.4214000 0.0253900 -0.0022859 -0.7757500 -0.7757500 2.6651000 -0.0151910 -0.1069700 -0.0734760 -0.0734760 -0.0734760 -0.0037395 -0.0037395 0.3225300 -0.0341790 0.0298880 3.3536000 3.6569000 0.1506900 0.1074500 0.1074500 0.1074500 0.8390300 0.0232860 -0.6729700 -0.1339600 0.0051359 -0.0121620 -0.0483630 -0.0391220 -0.0391220 0.0253900 -0.0022859 -0.0022859 0.0242680 0.0242680 -0.8049500 0.0269350 0.0269350 0.0269350 0.0335490 -0.1069700 -0.1069700 -0.0734760 -0.0734760 -0.0037395 -0.0626290 -0.0626290 0.3064900 0.0000000 0.0298880 -0.7048700 -0.6551100 -0.6518700 0.0097276 -0.6749000 0.1074500 0.0269350 -0.7743100 -0.0359930 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.408 0.000 0.000 0.000 0.000 0.000 0.574 1.333 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.408 0.000 0.000 0.000 0.000 0.000 0.574 1.333 0.000 0.000 0.521 6.2013182 12.8238443 5.7688777 6.9341261 1.5365503 11.1951426 0.0824301 6.8961580 8.3792934 9.1130443 NA 6.2722024 7.9832439 11.1075168 9.3815853 1.6673472 5.0131138 10.5428332 10.2875597 9.6560245 8.5220836 6.1591932 10.7244290 0.6673018 8.3677795 10.8293114 0.6673018 -0.9175699 10.1678498 4.4399289 13.3084884 12.5301063 6.6137585 10.1295012 10.6493827 10.1611953 2.7828069 2.2522945 0.0824301 NA 7.5941297 8.9802227 7.1430730 3.6059447 9.3923312 7.7653716 9.7253315 7.2219283 9.4693176 3.4043037 11.7037424 3.2523097 4.3303074 9.8135774 7.4280042 5.1047434 8.0963979 6.0248914 6.9025560 9.2622863 14.0280955 NA 9.7432645 NA 10.9434642 3.7262318 8.6078980 6.8505619 12.820153 8.897760 8.913684 16.698969 9.728036 11.606184 9.011636 10.327336 8.560136 10.082377 13.431382 11.845382 8.860454 6.558111 NA 8.115800 10.685540 10.9975098 4.3303074 8.0481615 10.1206105 8.2697294 9.5214291 3.0823790 3.4043037 10.3608268 10.3741236 0.6673018 8.2622866 7.4061974 13.1792571 9.9356869 8.9450148 9.5096901 7.1698398 5.1909032 8.9952666 10.1545099 11.2135912 10.7789102 10.4628383 9.3267411 NA 9.2109131 11.3817799 6.4222280 11.5916574 5.3491636 10.9798447 7.8472491 7.1430730 13.6461098 11.0925557 11.2563667 11.9978833 10.4896451 8.9967624 0.6673018 TCGA-E2-A14Z 64 1 563 518 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 7 2 4 NA 1 1 3 3 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387612e-06 6.244252e-07 11.5531170 6.0621239 7.7854708 11.4063909 -1.1571418 9.9124060 -1.1571418 9.6495059 11.2762809 8.6144459 9.9137481 7.2223351 7.2858997 9.5011678 6.0908831 8.8316410 10.3003371 9.7148615 7.5294571 5.0327797 11.4335433 10.2217930 12.6863867 9.8873504 9.2848630 10.4189682 8.0003032 10.4424042 1.4279279 3.0908873 8.8130622 11.8946750 13.1176256 7.8144998 12.1035819 11.4585859 9.3186897 5.9722400 2.6503050 6.1738730 8.7225395 9.4493614 7.3507509 13.0935508 0.8429386 10.7040432 13.7107659 5.6111399 9.7754221 11.4720852 8.3207144 4.4576665 1.6503050 15.4387081 12.5903835 2.9304157 8.5029523 0.4279279 4.0128815 9.6750552 9.5725771 7.9977745 11.7364474 9.6357466 9.9728832 1.6503050 10.4754972 10.2207090 5.4723123 7.1693859 4.9090434 11.3016192 14.3924101 7.9158394 10.7255993 11.5915685 9.8152182 1.8429386 NA 8.0572753 9.0633347 11.0720755 -0.1569810 4.6503108 7.4279187 10.1370026 10.1341270 4.5708758 7.4203847 4.8202351 9.9882517 11.6647303 -0.1569810 13.7625180 5.3023885 7.2438357 11.8686150 11.9821879 12.3611176 7.6884462 10.5468598 10.6111407 9.2000683 10.9214407 4.0908873 8.5346997 12.2415664 11.1088643 -1.1571418 10.4488987 9.6430473 0.8429386 3.3671474 9.3287855 11.0891030 10.1364279 8.9837860 14.9655417 9.6414281 9.9799474 8.2671223 4.3665181 15.2572121 9.0253506 13.3494498 12.9325723 10.5995126 9.4759514 8.6535280 9.9462441 -0.3330500 0.3752800 0.5593900 0.3239800 0.2889100 -0.0154660 0.3137000 0.3257600 0.3257600 -0.3565800 -0.3513300 1.6634000 0.0019418 0.3424200 -0.3610300 0.0290440 0.0290440 -0.2592400 -0.2592400 -0.0378980 0.1799600 0.0000000 -0.3068600 -0.1542600 -0.1542600 0.0986140 0.2896100 -0.2795300 0.0511030 -0.3045100 3.5786000 -0.3445800 0.3239800 -0.3469800 -0.0154660 -0.0410240 -0.0388040 0.3257600 0.3257600 -0.3757200 0.3443000 0.2872300 -0.3547600 -0.3630600 -0.3662400 -0.3344500 -0.3344500 -0.3758300 0.6719600 -0.3489300 -0.0010901 -0.2592400 -0.0264410 -0.0264410 -0.0378980 -0.3427100 0.0000000 -0.3214700 -1.0295000 -0.1542600 0.0341130 0.3958400 0.2896100 0.9334500 0.2986700 -0.2948500 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.343 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.343 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 9.8443645 13.0591717 8.5047344 10.3075021 3.4055023 11.1038758 4.2005122 1.6503050 8.3428023 8.9237737 0.4279279 7.3348096 7.4940083 10.6251355 9.2384905 4.1648828 9.3811451 9.5537627 9.7445774 10.6900136 8.5845582 7.3782316 10.8047677 4.0524072 7.2900391 9.9728832 3.5978410 NA 11.0792695 3.5978410 13.5196847 12.4619153 8.0548447 10.1225669 9.6202116 9.8873504 5.0524115 2.8429587 NA 6.1828055 9.2255803 9.6078280 8.8708622 5.0908831 10.4211308 7.9436184 10.7588356 4.9722377 8.9396715 NA 11.1395858 3.2352675 3.3023922 9.4063336 6.4053508 5.4576665 9.6226756 8.7009373 7.4391460 -0.1569810 14.0962129 -0.1569810 10.1933430 0.8429386 8.5433961 4.1648828 8.0303085 8.4922125 11.437225 6.570877 8.914419 12.103582 10.055453 11.312089 13.093551 11.817909 9.077774 10.128936 13.043472 10.596591 9.063335 11.874485 NA 7.587790 10.832706 10.777016 6.859765 8.736258 9.268172 7.453981 9.753584 8.022865 6.837310 9.887350 7.217995 -1.157142 5.584424 7.960625 10.702879 10.419913 8.760328 8.344793 10.073577 7.574276 7.997775 10.151295 10.460424 9.918435 10.078970 8.499381 NA 9.401760 7.031743 6.935713 10.134127 6.209278 10.796061 9.988252 7.350751 15.850268 10.353226 10.682554 12.449708 11.803320 9.322736 2.427928 TCGA-E2-A150 48 0 NA 773 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 93.58.0 4 4 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 9.455874e-07 2.224912e-07 12.5013539 4.3953439 6.5403947 11.6145132 0.2798873 10.5439190 -0.3050752 9.3351500 11.7151905 7.9826172 9.8828756 7.5022598 8.2966758 10.2989948 8.6047982 9.1827449 9.2685523 10.3690973 8.7942527 3.2184712 10.5102883 11.2041852 13.2059163 10.6119041 10.6119041 10.0899035 5.5277960 10.6711075 NA -1.3050752 10.8376502 12.5914266 12.4553131 5.9140741 11.7797134 11.9340560 11.4754448 7.0872220 4.1543402 8.1847529 8.4663946 6.3022350 8.3405636 3.7823666 -1.3050752 14.8962823 11.0530067 8.4647430 9.4958049 11.0419726 6.5590910 4.6491038 NA 16.4063733 10.5190682 1.6949248 10.2966758 NA 5.1867580 9.6786112 10.4766745 9.6337494 10.4692803 10.0049496 9.6899655 -1.3050752 11.4042043 12.0995144 5.8648300 8.3796534 4.1543402 4.0872252 14.9753858 7.8814401 11.2150325 10.6574396 10.9333097 1.5022797 NA 8.4447743 10.4266482 11.0756366 NA 4.8446518 7.6491017 9.3849029 11.1085330 4.4228250 6.8034298 7.0524572 10.5126881 11.5194660 1.2798873 12.6632118 4.0872252 6.8847298 11.1872590 13.1921331 12.6802133 8.8623231 12.0043813 10.7886527 10.3641400 11.6243483 5.3531151 7.7903022 12.6237934 8.9628622 -1.3050752 10.3544550 10.0791491 3.0168350 4.8746150 9.5806013 8.5497735 9.7427106 9.5528860 14.5576634 10.2150325 10.3633469 6.9663682 0.2798873 11.8941172 7.0655928 13.1669611 12.9708112 9.7068311 10.4901330 8.5356829 10.0053076 0.459000 0.459000 0.556550 -0.346180 1.187900 -0.283410 0.036088 -0.404840 0.428050 -0.356790 -0.356790 1.262300 1.158000 0.198470 -0.336760 3.656900 -0.067056 0.715470 -0.357280 -0.386720 -0.366010 -0.067726 -0.357490 -0.357490 -0.355560 0.516990 0.547000 -0.041295 0.514410 0.349980 0.459000 0.066945 -0.755130 -0.520920 -0.339640 -0.505770 -0.528900 -0.404840 0.421330 0.422170 0.087969 0.061651 -0.432350 2.887800 0.036229 0.036229 -0.505460 -0.555220 -0.553370 -0.359310 -0.403660 0.715470 -0.347670 -0.350670 -0.386720 -0.366010 -0.505720 0.833920 -0.357490 -0.357490 -0.401410 -0.511970 -0.041295 -0.362830 0.282000 -0.236060 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.547 0.547 0.459 0.459 0.514 0.514 0.000 -0.236 0.000 0.000 -0.375 -0.375 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.547 0.547 0.459 0.459 0.514 0.514 0.000 -0.236 0.000 0.000 -0.375 -0.375 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 8.4729820 15.2362890 3.2184712 9.1827449 4.5775497 12.9291237 1.6949248 9.3726246 8.1645470 8.5403950 5.4893214 8.5139186 4.2184635 10.8206413 9.4329972 1.6949248 8.2836195 9.3531164 10.2901624 8.6821691 8.8471137 7.6256424 12.1893856 3.9986829 9.0612273 9.6899655 3.0168350 NA 9.3096148 -0.3050752 12.3549009 13.0951841 8.2243355 10.1414714 10.1435376 9.5182723 5.9428335 2.6949025 -1.3050752 NA 8.9698654 9.3003846 9.9362924 2.0168172 8.6795086 5.8547761 9.8203184 5.6606891 9.8754357 6.2026998 12.6347596 2.8648300 3.8648300 9.8473927 5.6970454 4.3673291 8.8735699 7.5652697 5.6949053 9.4909445 13.1639744 0.6949248 10.9487525 NA 6.7929373 4.4497925 8.5372553 6.5277944 13.899539 6.546654 7.859812 11.779713 9.430461 10.787662 3.782367 9.673615 9.414294 11.323123 13.296850 10.950524 10.426648 8.519864 NA 7.559091 11.461848 10.3279002 3.1543402 8.9237235 9.2379367 8.4925667 8.9092607 6.9756760 4.6256446 10.6119041 4.7823666 -1.3050752 9.2966758 9.5588202 13.2773410 10.5110887 5.5528873 8.7447535 10.1336968 6.6017960 9.6337494 9.7690464 12.8293313 10.8763678 10.2751635 8.7757225 NA 9.3798464 6.2494946 6.2026998 11.1085330 6.0347550 9.6998277 10.5126881 8.0353336 13.9919645 10.9750958 10.2360016 12.8551704 9.6786112 9.2360015 0.6949248 TCGA-E2-A152 56 0 NA 825 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 93.58.0 6 3 1 NA 1 5 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.983365e-06 7.284961e-07 12.7249319 3.1862787 7.7971434 11.1203545 NA 9.8951379 NA 10.3377920 11.6572473 7.4440765 10.1490494 7.1705120 8.8363941 9.5042813 6.8623894 9.4275886 10.6826552 10.1615663 7.5815802 5.1056613 9.9248119 11.9167122 15.0279288 9.7861919 8.9619251 10.9079727 4.3065758 10.5808350 NA 0.6627524 8.4781002 12.3026230 12.0961721 7.7152853 17.9756510 13.7856259 9.7301515 3.7920016 0.9846258 6.3974265 8.7261122 4.5206988 8.0003392 12.4226053 -0.3373387 9.9573379 12.6522890 6.9341803 8.8264675 10.6940737 8.2495567 8.8963366 2.9106367 14.2873646 9.0646633 0.2476845 9.9630696 2.1221426 4.6169105 9.7036917 10.7478576 9.3931873 11.1724921 10.2979818 9.6457107 1.6627068 12.2265092 10.1435073 5.3906367 8.1015088 11.3128713 9.7640362 16.4693988 7.1435475 10.8156356 10.8263667 8.2792661 1.9846623 4.9481196 7.6739443 8.7475254 11.8916861 0.2476845 6.8376431 7.0593217 8.8061004 11.2872841 7.7501797 6.2173063 5.5815802 9.7207087 11.3850977 NA 13.1865853 5.6399961 6.5815802 11.5618851 14.2555537 12.7290586 7.0847818 11.1598205 10.5886423 9.9583426 11.2551741 4.7920016 8.7803603 11.7284698 11.5093828 NA 10.5733598 8.9733297 -1.3371565 2.1273691 10.3661881 10.4020758 8.9201048 9.0847818 15.4975091 9.2718958 9.7771101 7.4700723 2.1221426 16.3112642 9.2966205 12.6178221 11.2228110 10.2911626 9.6563632 8.2551740 10.3456327 -0.129050 0.242600 0.258510 -0.545350 0.000000 0.312050 0.308840 -0.112380 -0.112380 -0.127490 -0.127490 0.363740 0.291470 -0.100560 0.208050 0.191280 0.191280 0.289240 0.289240 -0.994460 0.289720 0.664880 -0.550120 3.656900 -0.534320 -0.528010 0.204990 0.204990 0.273120 -0.081244 -0.129050 -0.112860 -0.545350 0.312050 0.312050 0.308840 0.308840 -0.134750 -0.112380 -0.112380 0.289560 0.300060 -0.127490 -0.527900 -0.527900 0.269650 0.269650 -0.100560 -0.138740 -0.534220 -0.535840 0.289240 0.289240 0.289240 -0.907010 0.289720 -0.543290 0.262900 -0.550120 -0.517670 -0.530960 -0.528010 0.204990 0.193860 -0.505180 -0.162850 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.240 0.240 0.273 0.273 -0.103 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.224 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.240 0.240 0.273 0.273 -0.103 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.224 9.2476795 14.9043279 7.7997084 10.1035863 1.0300535 11.8640753 NA 0.6627524 8.6947629 9.1843175 -1.3371565 8.4657664 1.6627068 10.2120204 9.0983874 2.5696126 5.9388409 9.1364229 11.4583509 9.7016360 10.2486326 7.9550390 11.3687813 3.3065685 8.2663434 9.6457107 -0.3373387 NA 9.9230486 -0.3373387 11.9660697 12.6011021 8.2192232 10.2893387 8.6725456 9.5778495 5.4176061 1.8326470 0.2476845 -0.3373387 7.9573377 9.9704872 10.6132730 2.1221426 10.1415221 6.1545711 9.7193548 6.6739450 8.9271596 -0.3373387 9.2672703 3.8721688 3.4176095 9.3151946 4.9871662 2.8326470 9.6864715 7.7475257 8.1803866 3.1221426 13.8055421 -1.3371565 10.9133116 NA 6.2401464 4.1862787 8.7435345 7.9434877 11.679003 5.581580 9.011445 17.975651 9.463617 10.282478 12.422605 11.218504 9.018278 10.907973 13.017931 7.486084 8.747525 9.034494 NA 7.024661 10.827310 11.612726 7.889129 9.276506 9.346589 8.251432 10.841852 6.611084 8.422605 9.786192 7.007013 2.247685 8.407551 7.765742 13.110317 10.222094 6.980129 8.505068 10.724088 4.470075 9.393187 10.410910 11.407971 9.622719 10.836082 8.789421 9.885512 9.485941 9.611865 3.520699 11.287284 9.023564 11.216337 9.720709 7.138451 13.406868 10.280644 10.036126 12.481998 10.480900 10.065196 NA TCGA-E2-A153 51 0 NA 707 breast stage iib t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 93.58.0 1 5 3 NA 2 1 1 1 3 4 4 3 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 10.9447699 -0.8463244 6.7234630 11.0672444 1.7385517 10.4121730 NA 9.7282005 11.5297324 8.0362500 9.5544864 7.4528153 8.4619459 9.7253596 7.1422919 8.9833297 9.9504578 9.3618414 7.4062722 4.3235286 10.3824257 10.7535198 12.8375885 10.6609061 9.3384824 10.2149781 4.0604971 10.0469009 NA 0.7385517 8.3532792 11.1595823 12.3090925 8.9545069 13.2690571 12.8488353 10.8015150 6.8046589 3.2410622 7.3185139 8.2595154 9.0784196 8.4777874 12.5801338 2.8540555 11.6959134 13.1803033 5.5286463 9.4945474 10.7000192 6.7460641 7.5502119 NA 14.6244485 9.6514588 1.9609565 7.9928109 NA 5.3630589 9.5416242 9.8798252 7.9316842 11.7834189 9.4676237 9.7441941 1.1536108 10.8828028 10.2666980 6.3824252 8.9673882 NA 11.6194284 15.3932055 7.2037826 10.7163264 11.2240634 9.1479604 2.9609565 2.4755259 8.9753808 8.8313266 10.6864499 -0.8463244 6.6693075 7.3285322 9.5045461 11.1447745 7.0115884 5.6130395 4.3630589 10.2706007 11.5526178 -0.8463244 13.6007548 6.1759756 7.1479599 13.1437996 14.1516244 12.6162370 8.6985713 10.1759747 11.1048917 10.3492745 10.8475295 4.3630589 8.4203936 12.3848282 11.2203689 NA 10.6384298 9.3235320 NA 3.2419164 9.3033540 10.5491411 10.0887721 9.2982651 15.5614058 10.2854639 9.9374237 7.2516386 5.1308856 14.6160134 10.2404066 13.5251794 12.8444780 10.0717249 9.4990123 8.1366005 10.7319372 -0.080807 1.021200 1.030400 -0.061152 -0.066989 -0.078011 0.184950 -0.279530 -0.279530 -0.069600 -0.069600 0.607740 0.000000 0.000000 -0.071873 -0.071873 -0.071873 -0.080674 -0.080674 0.029466 0.164000 -0.069583 -0.446200 0.245130 0.245130 0.146820 0.146820 0.146820 0.565610 -0.080807 -0.080807 0.029184 -0.061152 -0.078011 -0.078011 0.184950 0.184950 -0.279530 -0.279530 -0.279530 0.180260 0.180260 -0.069600 -0.093667 -0.093667 -0.093667 -0.093667 0.000000 0.000000 -0.071873 -0.071873 -0.080674 -0.080674 -0.080674 0.029466 0.164000 -0.069583 -0.506810 -1.171600 0.245130 -0.066654 0.146820 0.146820 0.565610 -0.007472 -0.394810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 9.2237278 14.6801062 7.8224918 10.0014473 1.1786190 10.2809565 0.7385517 NA 8.2647428 9.1773612 NA 7.9990969 5.0115896 9.9536980 9.6414470 2.1536108 8.4710196 9.3122166 10.3096901 10.4822819 9.2104885 6.8883171 12.3594002 3.1536108 9.1265868 9.7441941 3.5459190 0.1535460 10.8678525 2.8540555 13.1407822 12.3500554 8.0990506 10.1925260 8.7101132 9.2905981 4.7974644 1.7385517 0.7385517 6.9737857 8.2647428 9.9872877 8.8082431 3.0604971 7.6775611 6.8260323 9.9793607 7.2568946 9.3896212 NA 10.2443811 3.1536108 4.5459251 9.9112970 6.2839199 -0.8463244 9.6702919 9.2699509 4.0115851 0.7385517 13.9341467 2.3235430 10.3341378 -0.8463244 9.4789124 5.6454596 7.7683167 8.8644134 13.000371 4.960961 8.208889 13.269057 10.557152 10.566177 12.580134 11.936196 9.192526 10.509509 13.447294 11.394100 8.831327 9.641447 0.153546 7.343432 11.252626 11.039685 7.125151 9.157827 9.178747 7.779316 9.892096 6.392012 6.908495 10.660906 7.363061 4.323529 7.313478 5.149772 12.958343 10.604818 8.615086 9.152197 11.737395 3.854046 7.931684 10.488439 11.064624 10.076934 10.467624 8.843605 NA 9.316426 7.211978 2.738573 11.144774 9.242395 10.453387 10.270601 6.708196 13.980751 9.982537 10.294437 13.119752 10.727727 9.393206 0.153546 TCGA-E2-A154 68 0 NA 591 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 5 5 3 NA 2 1 1 1 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 2.224912e-07 10.631162592 3.635220391 7.285990275 11.264582523 NA 9.940466889 NA 9.582892026 11.653147773 10.006087597 9.870952929 7.965784285 8.890726656 8.697001942 5.181194009 9.046652027 9.874776682 9.978633675 6.434312968 NA 10.654482980 9.765333014 13.147531800 11.128040476 9.378310031 9.823468512 2.576328637 10.461011468 -1.008682243 6.613421148 6.916181626 9.988549215 12.242112224 6.467103372 12.987401754 13.482032577 9.537299368 4.922107439 NA 7.057458937 8.200823098 11.779476259 7.471150059 13.623285650 4.161291138 10.313861206 13.959631479 1.798714147 9.476192508 11.274458061 9.815532842 5.874012465 NA 12.730150187 7.974363535 -0.008682243 7.674364604 NA 2.691802133 10.480715894 10.375073977 10.436901911 10.774777260 10.343964938 9.854781601 1.798714147 11.793482118 10.096623452 6.980053870 7.971509067 5.313296650 11.706044533 14.963429558 8.344428186 11.644662656 11.408694827 8.236922588 2.991372184 NA 7.785785271 9.061490546 10.878590328 -0.008682243 5.348922861 7.627994160 10.729461936 10.617078500 4.874014925 4.120650535 3.450802153 10.284266459 12.071354391 1.991354042 13.453296720 7.335665468 9.002597048 12.463425849 12.834014684 12.925521265 7.646005646 10.193493574 10.505590569 10.312807416 11.020656928 6.258157075 8.540191597 11.738723512 10.557899508 NA 10.495692165 9.203257939 0.991390325 4.451784778 9.166295418 11.400230131 11.036446737 9.299708753 14.718199846 10.444125772 10.161294665 8.980054442 9.517868950 15.694962403 9.994887559 12.268657084 11.369393523 10.873248382 9.202041032 8.938276087 10.606107111 -0.5262400 0.7840800 0.7802200 0.1367200 0.1367200 -0.3471000 0.0000000 -0.0180780 -0.0180780 0.4711500 0.4711500 0.4711500 0.1456300 0.1559100 0.0000000 1.2041000 -0.0631660 0.0407510 0.0259520 0.4975300 0.1724200 -0.1173000 0.0146090 0.0146090 0.0146090 0.0512450 0.0512450 0.0512450 0.3866700 -0.5262400 -0.5262400 -0.0230180 0.1367200 -0.3471000 -0.3471000 0.0000000 0.0000000 -0.0180780 -0.0180780 -0.0180780 0.4811300 0.4811300 0.4711500 0.1339100 0.1339100 -0.2447200 -0.2267500 0.1559100 0.1685000 -0.0011288 -0.0631660 0.0407510 0.0259520 -0.3531600 0.4975300 0.1724200 -0.1173000 -0.5856200 0.0146090 0.0146090 -0.5397700 0.0512450 0.0512450 0.3866700 0.3283400 -0.0015243 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.000 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.000 8.151240856 13.064507078 7.824259970 9.931683353 0.991390325 10.505590569 -0.008682243 -1.008682243 8.849350676 7.304252743 NA 6.957154291 0.991390325 10.112903258 9.530528459 3.383690470 6.830573516 9.254638919 9.680494028 9.464060482 9.219202167 8.052065873 10.335110610 2.239306381 10.446696871 9.854781601 4.276772076 NA 10.123226719 0.576377015 13.101363544 11.635000448 7.008177599 10.121296632 7.752921159 8.975788081 2.991372184 1.313303907 1.798714147 10.385832425 8.883153404 9.066848828 10.012349660 2.161307264 8.041408917 6.874012465 10.406054881 6.046652573 9.628900241 NA 12.538384706 2.898266407 4.606080917 10.164978180 5.720513787 NA 9.678745370 7.511006212 2.576328637 -1.008682243 13.767545663 1.313303907 10.294579627 -1.008682243 9.097278157 6.779272855 7.417634829 9.355504388 13.977570 5.635226 8.274458 12.987402 10.594996 10.596386 13.623286 12.249788 8.907249 10.954266 12.878971 12.104461 9.061491 8.982891 0.576377 7.514932 11.203866 10.893745 8.057459 8.364235 8.731150 9.487225 10.397559 5.239299 8.587559 11.128040 6.591283 3.945570 8.002597 7.893504 10.433276 10.236328 9.654038 8.033029 12.077506 2.691802 10.436902 10.510514 11.901825 8.998397 10.435349 9.069520 NA 8.970695 8.920110 1.991354 10.617079 8.331220 10.453872 10.284266 6.933884 13.736098 9.563122 10.129641 12.831558 10.549312 9.369665 NA TCGA-E2-A155 58 0 NA 640 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 93.58.0 3 1 2 NA 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 7 0 0 0 0 0 0 1.17947e-06 4.85664e-07 11.5773731 6.1229957 10.0867684 11.5323170 NA 10.9950060 -0.8254657 9.8089848 12.5225948 9.0169779 10.8888731 8.2660627 10.1393293 9.5664082 7.5409494 8.9633458 10.6299547 9.2521110 6.0994404 2.8750723 10.1889967 10.0758715 13.7068312 10.2434057 9.0302745 10.2703542 3.1746301 10.5701589 0.7595820 0.7595820 6.9261714 11.0281320 13.2563606 6.3192855 13.8617844 13.9407423 7.0845204 5.5924810 2.4965646 4.6824216 8.0465325 6.4600299 8.2647400 12.8468318 4.1969925 10.0126495 14.8701413 -0.8254657 8.6574353 11.2049498 5.6503596 7.9177790 1.3445445 11.9245001 7.3269121 -0.2404180 8.1476074 NA 3.7292156 9.9563971 10.2524446 9.1837562 10.6371297 11.2953514 9.8080769 0.4965135 11.6187365 10.1142067 6.1346296 6.0934905 -0.2404180 11.9881081 15.3844997 8.8266568 11.6240341 11.4011902 7.3889463 -0.8254657 1.6340821 8.0263768 10.1879502 10.3746066 NA 5.0075185 7.2935682 11.4336351 11.2358299 5.1404106 4.1519075 3.1746301 9.9522938 12.2660629 1.1745982 13.2323654 5.1633136 7.8802600 11.3816418 12.3403981 13.0889659 7.3470553 9.4875105 11.4049482 10.7578654 11.4944407 5.4507527 8.3998350 12.1797257 12.3990061 NA 10.1215338 8.6061250 0.4965135 1.5008530 10.2021880 9.9067949 9.7810328 8.5956405 15.1661383 10.2890206 10.3934934 8.8193849 2.5669369 15.9677164 3.4600348 11.3286545 10.0161918 10.0079129 9.2746328 8.1331802 9.9151504 0.0120450 0.0120450 -0.0029519 0.0084224 -0.0025454 0.0028615 1.8007000 0.0621690 3.6569000 0.0145570 0.0145570 0.0145570 0.0025839 0.0025839 0.0221120 0.0221120 1.9858000 -0.7301500 0.0163730 -0.7364000 0.0110690 -0.0011604 -0.7461500 0.0638850 1.7312000 -0.0115250 -0.0115250 -0.0115250 0.0225320 0.0117660 0.0120450 -0.0042062 -0.7419700 0.0028615 -0.0012595 -0.7353700 -0.7407500 -0.7272400 0.0073090 -0.0321580 0.0000000 0.0095364 0.0145570 -0.0022469 -0.0022469 -0.0022469 0.0096757 0.0025839 0.0025839 0.0221120 -0.7321400 -0.7301500 0.0163730 0.0163730 -0.7364000 -0.7344500 -0.0011604 -0.7418900 -0.7461500 -0.7082200 0.0081439 -0.0115250 -0.0115250 0.0225320 0.0010576 0.0074481 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 7.0875169 10.4320154 8.4988081 8.2108009 3.3055620 10.8321693 1.1745982 -1.8252101 7.7763982 4.4034450 NA 8.4987854 0.1746621 10.6910662 9.3051981 2.0815101 7.6962283 9.2883696 11.3403196 9.6273836 10.1688254 7.8628778 8.9600799 -0.2404180 9.2203873 9.8080769 -0.2404180 2.6340588 10.8817709 3.3039122 11.5939293 12.1137475 5.5583319 10.2667239 6.6299554 9.1237246 5.4784089 0.1746621 -0.2404180 2.7595820 8.1633120 9.3395345 10.6554177 3.2620873 9.3552888 5.1746261 9.7335265 7.0294960 9.9415704 -0.2404180 8.1476074 2.9819805 4.3243714 10.1682523 7.2954870 4.1288213 8.6340592 8.9568068 8.6309820 -0.8254657 13.8494267 -1.8252101 10.1123691 NA 4.0572683 4.3644534 8.3791986 7.9706673 14.457148 6.344553 8.703082 13.861784 9.401040 9.984797 12.846832 13.707044 10.711603 10.453367 12.335129 11.064702 10.187950 8.012255 -0.240418 8.557252 11.092373 9.6609598 7.6624676 8.7708172 7.8202862 8.6320082 10.5980875 4.6824216 4.3243714 10.2434057 6.7099027 0.4965135 2.1746301 7.4566501 10.7390152 9.5924800 7.9144079 9.4022434 12.1628684 4.4414171 9.1837562 9.9888094 13.6261606 7.9042480 10.7555926 9.4611854 1.1745982 8.2098388 7.0414117 5.3243750 11.2358299 6.4646470 12.3244540 9.9522938 7.7001484 13.4760165 10.6649770 9.6819266 11.6063862 10.3039105 9.9803714 0.4965135 TCGA-E2-A156 61 0 NA 726 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 93.58.0 5 5 2 NA 2 1 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 0 10.7079190 NA 7.8164256 11.5902472 -0.4781452 10.9807240 -0.4781452 10.0116527 12.0980529 8.1142619 9.8979301 8.1291351 8.9205485 8.6172019 8.0453665 8.4075010 10.8516011 9.0648365 5.5878930 1.1067503 10.3594327 9.3097073 13.2433312 11.2699976 9.5104894 11.1946720 0.5218548 10.9060489 -0.4781452 -0.4781452 5.7885918 9.7239286 12.6428525 4.2222481 13.3076659 13.4356291 8.0216507 7.0295998 4.3797873 5.3031634 8.5441724 11.0211524 6.6715524 13.4787253 1.5218046 8.9995629 14.1809645 6.1942309 9.4063721 11.2463186 5.8968434 4.2222481 NA 13.5125381 8.1800160 -0.4781452 7.9605968 1.1067503 2.8437427 10.4525421 10.8014153 9.8392173 12.0947418 10.4211616 9.8493574 4.6917296 11.9237509 10.3491474 7.0609639 8.1328297 NA 11.8389347 14.3412354 7.6635545 9.9944956 11.6115862 10.1782296 -0.4781452 5.5878930 7.8346878 9.2205094 11.3283544 -0.4781452 4.2222481 7.2699972 9.3307690 11.2841868 9.9863505 3.7697294 4.0453643 9.5946073 11.5083579 1.5218046 13.3138833 6.3797856 7.5047983 11.6929815 10.7548251 12.8912658 7.7312579 10.1986433 10.8181475 10.8616547 11.6616758 5.2766939 8.6303290 13.1329448 11.9883911 NA 10.3562758 9.0551344 1.5218046 4.1157574 10.0658032 10.9904288 10.3080744 9.1656610 14.8560780 10.2716742 9.6510878 8.8141264 1.1067503 16.4474867 6.2497260 12.9844348 11.9475452 10.2394812 9.6549469 8.5047983 10.1434538 0.00000000 0.00000000 0.00000000 -0.00110870 -0.01354400 -0.00180140 -0.00076498 -0.00124730 -0.00124730 0.00388540 0.00388540 0.00032659 0.00152550 0.00361710 0.00260420 0.00260420 0.00374650 -0.00069303 -0.00069303 -0.00166290 0.00013863 0.00610900 -0.00138580 -0.00138580 0.00045060 -0.00899060 -0.00899060 -0.00899060 0.01307400 0.00000000 0.00000000 0.00194180 -0.00110870 -0.00180140 -0.00180140 -0.00076498 -0.00076498 -0.00124730 -0.00124730 -0.00124730 0.02188400 -0.00013862 0.00388540 0.00249690 0.00249690 0.00249690 0.00249690 0.00361710 0.00361710 0.00260420 0.00374650 -0.00069303 -0.00069303 -0.00069303 -0.90137000 0.00013863 0.00610900 -0.94598000 -0.97514000 -0.00138580 0.00485790 -0.00899060 -0.00899060 0.00662210 -0.00083160 -0.00443120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.4166219 11.3719916 8.1511612 9.1764407 2.1329716 10.5939374 1.1067503 NA 8.0686993 7.7838999 0.5218548 5.6588970 2.9812316 10.4075011 9.0394740 1.5218046 2.9812316 9.0878587 11.7938513 9.8210127 9.4672485 8.2187725 10.8192942 2.1067838 9.8683185 9.8493574 5.4760025 NA 9.5566038 3.5218046 12.5270784 12.0785503 6.8705324 10.3782303 7.4166227 9.0434052 0.5218548 -0.4781452 0.5218548 5.1942289 9.4495826 9.1584294 9.2833560 NA 9.2336439 5.8616552 10.3852167 5.6303297 9.3578550 NA 11.3447739 2.5218046 7.9605968 9.6106063 5.0222879 NA 8.6198366 6.4875892 4.7312593 NA 13.6827004 -0.4781452 9.7190215 NA 9.1584294 3.7697294 7.7744702 8.7979293 13.325028 5.076392 9.025630 13.307666 10.212676 10.425687 13.478725 13.565943 9.528832 11.041441 12.362779 9.917339 9.220509 8.922684 NA 7.487589 11.511909 11.078790 7.651088 8.716562 9.378230 8.640746 10.420958 4.731259 6.731258 11.269998 4.769735 NA 7.701714 6.457264 9.011653 9.419650 9.225708 7.481807 13.484249 1.106750 9.839217 10.222244 11.958256 9.415106 10.651732 9.776833 NA 9.606733 3.981241 NA 11.284187 5.788592 10.710394 9.594607 6.922684 13.731639 10.136515 10.542090 13.010147 10.317033 9.839217 1.106750 TCGA-E2-A158 43 0 NA 450 breast stage iia t1c n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 4 4 4 NA 1 3 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.463011e-06 3.122126e-07 11.45743136 2.26249329 8.25442539 11.33357786 NA 8.82365034 -0.54477143 8.90015857 12.03351640 8.91457529 10.22374158 9.32473749 9.25118343 9.14950174 8.12579986 9.55711940 10.02926417 11.06062325 7.79721860 4.68396027 10.58667919 10.67461477 13.00661168 11.21523988 9.65420262 10.80027174 3.91457409 10.77763530 7.67188989 5.16938790 8.80608299 12.07593629 14.06746512 5.02499778 12.23445270 12.34683251 9.64001911 6.58442740 4.09900057 8.63006941 7.70780913 11.46006640 5.66459661 6.66459661 NA 10.20710610 8.62882097 8.56627937 8.14688734 10.41840112 9.47542926 3.77707248 -1.54498190 13.55012075 7.12047947 -1.54498190 5.58442740 -0.54477143 2.84745579 10.26169335 9.57926502 8.91355037 8.25442539 9.97919566 10.06432242 11.35071900 11.75177321 10.63287473 3.26249329 7.18646292 2.45514965 10.79721836 14.45007165 8.04653526 10.24182172 10.78913762 8.94699690 1.26249329 1.91456452 10.63069332 9.62757127 10.08450029 -1.54498190 1.91456452 6.50499214 12.28189080 10.19323593 3.94699280 7.32550874 4.70307301 7.64001929 11.95872104 -1.54498190 12.36363017 2.84745579 7.16250311 12.59533442 11.81269572 13.17447906 5.06985251 10.64496826 11.12513601 11.35051642 11.32512305 5.04010776 7.62256216 12.14339402 8.86771365 2.26249329 9.25442539 9.93643860 4.38587965 4.78139119 10.33204427 11.11000351 10.26370570 9.44311823 14.75801466 11.23260452 9.91611145 9.05691458 0.04012092 11.93226953 7.80387215 12.75792542 10.05459170 9.90274366 10.96640220 7.71253182 10.87921816 0.00513590 0.92108000 0.94282000 0.07973500 0.75280000 -0.00802440 -0.98054000 0.04968200 0.01004900 -0.01972600 -0.01972600 3.65690000 0.93732000 0.03608800 -0.93223000 0.06065100 0.06065100 0.86672000 0.01140000 0.17302000 -0.93651000 -0.70496000 -0.90312000 -0.90312000 -0.90312000 0.05451800 0.05451800 0.06952500 0.04854600 -0.64151000 0.89626000 0.06465400 -0.94695000 0.10074000 -0.98201000 -0.95312000 -0.94649000 0.03286000 -0.00097017 -0.93570000 -0.93341000 0.94343000 -0.95631000 1.77770000 1.77770000 0.02827300 0.10599000 0.03608800 -0.94160000 -0.90798000 -0.92741000 0.01754400 -0.00235530 -0.00235530 -0.94291000 -0.92540000 0.01237600 0.09130000 -0.90312000 -0.90312000 0.09638000 -0.84171000 0.06952500 0.03232500 -0.02685100 -0.91957000 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.877 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.825 0.000 0.861 -0.946 0.000 0.000 0.000 0.000 0.876 0.876 0.802 0.000 -0.354 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.877 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.825 0.000 0.861 -0.946 0.000 0.000 0.000 0.000 0.876 0.876 0.802 0.000 -0.354 6.18985420 11.47681778 6.37995706 7.14164430 3.00297249 12.57999201 0.45512334 NA 8.86771365 4.40934341 1.04012092 9.08358915 -1.54498190 10.69533880 9.19069979 3.62507173 6.03257255 10.34084007 6.33778601 9.55514894 9.59876288 8.34540791 10.94021830 NA 8.98944673 10.06432242 2.15558734 NA 8.34083996 4.70307301 12.84390102 13.42740558 6.07719599 10.07398808 7.01738636 9.73417393 6.85602332 0.04012092 NA 7.08813842 9.00589061 8.21503203 10.34084007 2.04012092 10.48283205 5.49953659 9.36653576 8.09900005 11.08882017 5.56366762 11.48908287 0.04012092 3.62507173 10.93139379 6.20165738 3.74054984 7.81049452 6.81708726 5.08450228 7.44949700 13.57367930 -1.54498190 11.39472291 NA 8.92681901 8.83018306 9.02119765 7.10619545 8.066168 8.884551 8.478898 12.234453 10.567257 10.864535 6.664597 11.712826 9.478898 11.957230 13.843834 12.747034 9.627571 9.675522 4.664597 7.488566 10.356765 10.79332295 7.66946266 9.12844395 9.62569478 6.43813813 10.63664383 3.58442139 5.67431093 11.21523988 10.78997568 0.77703039 9.97821551 9.14902254 13.08364622 10.69295116 7.41224550 7.32242213 7.60742871 5.46636936 8.91355037 9.68155591 11.21877106 9.35676491 11.05016802 8.68876329 NA 8.51650138 8.28308974 4.70307301 10.19323593 6.25604447 12.06856716 7.64001929 7.89393551 15.78202960 9.98213198 9.99672444 12.40086188 10.62099284 10.27771457 0.04012092 TCGA-E2-A159 50 0 NA 762 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 4 3 4 NA 1 3 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.781242e-06 1.110089e-06 11.58398394 3.32205793 7.62583740 10.63526393 -0.48539797 9.97566973 0.09963185 9.27375784 11.99094189 7.47759800 9.58213634 8.05579868 8.84000744 9.56046162 6.52592948 8.87993086 10.58381606 10.67803721 8.57539781 7.94515468 10.76381547 10.25995612 12.70761121 10.15087340 10.05531443 10.38468134 7.53984122 11.27769022 0.09963185 1.51470301 9.53845630 11.77767770 12.33468145 6.52592948 11.87087882 11.71942596 10.31276874 6.43356541 2.97412545 5.85455177 8.52453075 7.00655498 5.50338690 11.10949312 0.09963185 11.26708266 9.96694317 7.41556855 9.72199700 10.95531164 9.19594031 5.17291149 -0.48539797 13.71320190 9.78832861 1.97412545 8.80356803 NA 6.20120256 10.21687473 10.38043531 9.62453266 10.38583717 10.21036524 9.33966075 1.51470301 11.73583595 9.85566476 5.90702043 7.68212028 10.06641026 8.88320840 14.69003712 8.96403641 10.98637723 10.73326519 9.38352459 1.51470301 3.15856324 8.33328418 9.50196593 11.57201684 NA 5.79082676 7.18003743 11.05773381 9.79315149 6.52592948 8.20818899 5.39734435 9.09872483 11.56676051 1.97412545 13.52199211 6.34759125 7.18712736 11.02076157 14.18881148 12.44894572 7.52872211 10.13171024 10.98637723 10.02818290 11.31661241 4.92409513 7.56455042 12.06857123 7.84113155 NA 10.69243295 9.62844408 1.51470301 2.90977310 9.71498763 10.87225401 10.12710974 9.54053356 14.99460853 9.80472089 9.80932279 6.90271879 1.97412545 13.42215602 9.56523082 12.08420162 12.35075234 10.15268527 9.21687460 8.21860537 10.16462276 0.26975 0.26975 0.50620 -0.27786 0.29517 -0.26312 -0.34870 0.27553 0.27206 0.30074 0.30074 0.29779 0.85304 -0.26733 0.02806 0.02806 0.02806 -0.25067 -0.25067 -0.28417 -0.24180 -0.25237 -0.17145 -0.17145 -0.17145 -0.24314 -0.24314 0.29135 0.29963 0.28659 0.26975 -0.26480 -0.26155 -0.26516 -0.26312 -0.34870 -0.34870 0.27553 0.27206 0.26737 0.27710 0.28026 0.30074 0.28089 0.28089 -0.28168 -0.23423 -0.51671 -0.28096 -0.24788 0.02806 -0.25067 -0.25745 -0.25745 -0.25540 -0.24180 -0.25237 -0.25745 -0.17145 -0.17145 -0.25629 -0.24314 -0.24314 0.29963 0.29183 -0.25781 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 9.2845398 12.9514135 0.8366513 9.2306639 4.9576453 11.6537736 1.8366109 5.2289456 9.2745901 8.9545328 -0.4853980 8.1494586 4.0382606 10.6936780 8.7143743 4.9409654 7.8411316 10.4980520 9.9710563 9.2944213 9.2063844 8.0065550 10.9433239 2.8366311 7.8207636 9.3396607 2.0996655 NA 10.3464051 1.6846392 12.6900956 12.5951032 7.3788879 10.2099303 9.6568090 8.8689512 3.6846280 3.1585632 0.8366513 3.4688961 8.3570523 9.5659109 10.1871274 1.9741254 10.3582148 6.3156025 9.7441217 5.0382650 9.5342928 1.6846392 10.9728522 4.1294149 4.0692897 9.8305648 6.6242720 8.3091180 9.5175170 9.5069323 9.5508757 10.2302351 13.1833100 1.5147030 10.6868170 -0.4853980 10.2737580 2.4215869 8.6426962 8.2977004 10.196626 8.549501 8.457217 11.870879 10.102011 11.540880 11.109493 8.483369 9.273425 10.471441 13.145538 8.879931 9.501966 7.125727 NA 7.733870 11.510999 10.91077156 5.86343054 9.69833744 9.07024977 9.38814605 10.66442053 7.71927313 6.22894757 10.15087340 10.09731451 0.09963185 9.23921591 8.63416196 11.54191688 10.86922692 7.14405861 9.16844272 9.32607664 8.20295246 9.62453266 9.84393769 12.03101760 10.41594601 10.44173919 9.49412715 10.35311804 9.78980211 8.01404949 8.98332598 9.79315149 6.85899799 10.84867074 9.09872483 7.71993294 13.61121127 11.00178831 10.41971290 12.39256126 11.16642642 9.38506665 4.70452895 TCGA-E2-A15A 45 0 NA 710 breast stage iiic t2 n3a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 13 white not hispanic or latino 93.58.0 3 3 1 NA 2 4 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.17776e-07 5.562279e-08 12.42709236 3.56525596 7.38922090 11.72184654 -1.64430710 10.40189846 NA 9.84413987 11.63845171 9.32662251 10.04623211 7.42726004 8.20910727 9.81009698 7.57254335 9.15264839 9.63598832 10.46399532 7.53321680 3.26268872 9.96266542 8.81830000 15.17055529 11.08052463 9.10734159 10.86433521 6.80288079 11.04644822 -1.64430710 -0.64430710 8.42188684 11.47084126 12.70300371 7.31289929 13.04966567 13.81073944 8.14370004 5.48508221 0.35580564 6.23844105 8.84263257 8.98879288 7.54314940 12.58281179 3.26268872 10.41952973 12.87844043 0.35580564 9.27092997 11.84263261 6.66868079 4.98515429 -1.64430710 14.18612910 9.11318764 1.52571811 9.05189572 -0.64430710 5.35579859 10.42188684 10.41074103 9.61082609 11.28468607 10.06229363 9.82238393 1.94076814 10.81727709 10.25892625 4.73083556 7.70673705 11.16234720 10.80391387 14.52683754 8.89100505 11.40972346 11.74098594 9.20363798 1.67771119 5.23843913 8.30853881 9.58281188 10.11651759 -0.05919428 6.17597562 6.78625002 10.05537003 10.96866607 6.44326019 6.74381518 4.69564868 10.11485358 11.71334961 5.12398066 13.40053323 5.18868576 7.26868702 11.86903173 14.21889493 12.99089218 9.08201568 10.88985725 10.68419203 9.86417670 10.77127528 5.20128883 8.48379200 12.70286527 9.84162693 -0.64430710 10.58100507 9.59420235 0.35580564 2.52812119 9.39677216 10.23154701 10.41716876 9.25439894 14.89677318 10.30489475 10.71004701 7.46170617 2.16314446 14.89485037 7.21066647 11.67292755 10.67941535 9.92137578 9.20598454 8.12232639 10.08833814 0.3130600 0.5723700 1.4037000 -0.4844300 0.3346400 0.1539700 0.4300700 0.1917800 -0.5122800 3.6569000 1.2174000 1.8408000 0.4268800 -0.0542860 0.2421800 2.6226000 2.4586000 0.1663500 0.1981700 0.0000000 0.1529400 0.3422600 0.1046800 0.2025900 0.2025900 -0.4716000 -0.0008316 -0.0008316 1.1799000 -0.4808100 -0.4397300 -0.0163570 -0.4844300 -0.0642400 -0.0384730 0.4319300 -0.3058000 0.1333200 0.0682350 -0.0816050 0.2823200 -0.7626100 -0.5182500 -0.4730000 -0.4730000 -0.4730000 -0.4730000 -0.5703100 0.1650500 0.3858400 -0.2696100 0.1663500 0.1981700 0.1981700 -0.0366740 -0.4723600 0.3297900 -0.2867900 -0.4214500 0.2025900 -0.4828100 -0.4958000 -0.0008316 -0.4949600 -0.7062100 0.1769400 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.277 -0.277 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.277 -0.277 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 9.0768968 12.9280833 6.3501507 9.1695788 2.5257181 10.9012448 0.9407306 -1.6443071 8.6225841 6.6504185 NA 8.4338817 -0.6443071 10.6266769 8.6754698 4.2137750 7.4164935 9.1807563 7.3726057 10.3621237 9.4867992 7.5004555 10.2641903 2.4432618 8.7438148 9.8223839 1.1631767 0.3558056 10.7478466 1.1631767 12.0044922 12.0920938 7.6013504 10.4834696 9.3402160 9.4675854 4.7987401 1.3558056 -1.6443071 1.1631767 8.3614223 9.3926581 8.7340924 2.2626737 8.5553472 7.4029217 9.8044302 6.9815068 9.8131785 NA 8.6754698 2.9407681 3.4432618 9.7838069 6.0071372 6.1436995 9.2961111 8.4991810 7.9007618 0.9407306 13.3940307 1.3558056 11.2634394 NA 8.7841578 4.5846138 8.6900710 8.1190101 14.066163 7.093890 8.852652 13.049666 9.824305 10.696482 12.582812 12.868229 10.390940 10.837597 12.653789 9.946852 9.582812 8.915175 2.748118 7.503003 13.040272 10.5731495 7.1695783 8.3487361 9.9672836 9.7357175 9.7187332 6.9815068 9.0501556 11.0805246 6.5894175 -1.6443071 5.7651873 9.0403445 10.4528421 9.8162535 9.3409281 8.8695251 13.0106574 6.7000929 9.6108261 9.8198328 12.2640026 9.7997772 10.3868095 9.3522710 0.9407306 9.0948272 7.0246820 7.1950011 10.9686661 6.9482551 10.1542694 10.1148536 7.2012878 12.5286938 9.9031742 9.7914678 12.4821794 10.2020715 9.1371574 2.6777337 TCGA-E2-A15C 61 0 NA 694 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 93.58.0 5 2 2 NA 3 2 1 3 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 10.5725108 6.8124982 7.8303567 11.5439985 -0.3219281 11.5335244 NA 10.1888361 12.0589388 7.8678965 9.8137812 7.6976626 8.6653359 9.4462562 8.3001237 9.2742617 10.9357544 9.2526654 7.0000000 -1.3219281 10.7973373 9.4902492 13.0161815 9.3065174 9.4990486 10.5022351 5.6322682 10.5572722 -0.3219281 0.2630344 8.3128830 11.9040324 12.6511414 7.3504972 13.4611213 13.9076418 9.5530533 6.0089888 2.9259994 6.0089888 8.9068906 9.5321611 8.0156938 13.0794848 5.1210154 9.6249782 13.6791722 5.7865964 9.7228553 11.6023277 5.6553518 5.2326608 -0.3219281 13.6180037 7.5422580 1.2630344 8.2364926 -1.3219281 4.8875253 10.2872506 10.0552824 10.1654095 11.6503338 10.5495922 9.3871557 1.0000000 12.1623913 10.2826251 7.5360529 7.8654240 13.3163947 12.4548133 14.2410596 8.1589631 11.7128709 11.4781629 8.0746767 1.0000000 -1.3219281 7.9977440 9.3767766 11.9098931 -0.3219281 6.2172307 6.8923910 9.8722131 10.8722131 7.4594316 5.9354597 3.4854268 10.5344974 11.8073549 0.6780719 13.4005593 6.3219281 7.8073549 13.3371759 12.9628960 13.0108078 7.7813597 10.2756589 11.4571756 11.3718681 11.6980101 5.3923174 8.4886435 11.9984494 11.4858293 -1.3219281 10.1001367 9.7286008 1.0000000 3.3834969 9.7780771 10.8533096 10.2302607 9.6337218 14.9330082 10.2578592 11.0287349 9.0628557 4.6322682 15.3319246 10.2784495 13.4118817 11.5190465 10.2055489 9.9032793 8.5093791 10.2256364 0.0038259 0.0038259 0.0038259 -0.0034627 -0.0034627 -0.0128510 0.0331270 -0.0089906 -0.0089906 1.2793000 1.2793000 1.2793000 -0.0024885 -0.0024885 -0.0071958 -0.0071958 -0.0071958 0.0000000 0.0000000 -0.0158790 0.0015255 0.0086135 0.0294660 0.0294660 0.0294660 0.0300290 0.0300290 0.0300290 0.6151600 0.0410340 0.0038259 -0.0037395 -0.0034627 -0.0128510 -0.0128510 0.0331270 0.0331270 -0.0089906 -0.0089906 -0.0089906 -0.0027707 -0.0049397 -0.7196300 0.0112610 0.0112610 0.0112610 0.0112610 -0.0024885 0.0098669 -0.0071958 -0.0071958 0.0000000 0.0000000 0.0000000 -0.0158790 0.0015255 0.0086135 -0.6633700 0.0294660 0.0294660 0.5759400 0.0300290 0.0300290 0.6092500 0.0303100 -0.5913600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.581 0.000 0.000 0.000 8.9932215 12.8888954 8.4708622 9.3434078 4.7224660 10.6424128 4.0000000 -1.3219281 8.1618877 7.9541963 NA 7.7075800 1.2630344 9.8728288 9.4262648 0.2630344 9.3110671 9.5030306 10.3995984 9.9020736 9.1594677 7.8021932 10.6209529 1.6780719 10.1132212 9.3871557 3.4854268 NA 10.1598713 2.9259994 12.5079928 11.8068718 7.4362951 10.4938554 7.9044841 9.1106138 4.1699250 0.6780719 -0.3219281 4.4854268 8.7865964 8.9020736 10.4425289 3.5360529 7.3288365 5.8379432 10.6355368 7.3327079 9.5219930 -1.3219281 10.1431281 4.2927817 4.1375035 9.7009945 5.5489298 7.3327079 9.1507627 8.3201236 8.1957413 NA 13.4559950 1.0000000 9.9977440 -0.3219281 7.0268001 5.2630344 7.9212459 8.7360636 12.2716778 4.1375035 8.9943534 13.4611213 10.4561490 9.9348703 13.0794848 12.8684368 9.3009291 11.3440739 12.8369971 9.5014391 9.3767766 8.5622424 0.2630344 7.6553518 11.3425192 11.036174 7.061776 9.336283 9.714932 8.145677 10.681165 6.770829 8.207502 9.306517 6.523562 3.432959 5.643856 6.166715 12.114653 10.732337 9.507795 8.369815 12.926296 7.830357 10.165410 10.807355 11.100925 10.415742 10.738430 9.569096 NA 9.136684 7.666757 8.477354 10.872213 7.928370 10.780510 10.534497 7.504620 13.599773 10.122051 10.470049 12.768184 10.985273 10.525129 2.137504 TCGA-E2-A15D 47 0 NA 526 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 5 2 2 NA 2 1 1 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 5.562279e-08 10.829417 8.217828 7.331999 11.034609 -1.513337 11.259648 -1.513337 9.908574 11.954624 12.234912 9.913298 8.525428 8.440706 9.845160 8.137561 9.368388 9.992817 8.680035 7.231343 1.656451 11.021542 9.942350 12.255521 11.149845 9.400147 10.354174 5.771912 10.837158 1.656451 6.895900 8.875603 11.195593 12.837725 8.561989 13.163844 12.822597 9.857197 7.190412 4.010073 7.277672 8.641327 9.699613 7.480863 12.782852 2.293871 9.911201 14.735808 6.130365 9.839623 11.018865 10.024213 7.941836 -1.513337 13.708519 8.452294 5.417245 9.522683 -1.513337 4.486508 9.933076 10.707492 10.201184 11.030266 10.461999 9.629892 5.573971 11.723121 10.195593 7.350695 9.204186 8.606747 11.453015 14.954926 8.387979 11.695353 11.230502 9.182607 1.656451 2.734439 9.555959 8.912774 11.179343 -0.513543 5.463789 7.183477 9.724317 11.135092 11.335914 5.293863 4.656433 10.357644 11.684033 2.071488 13.321326 6.998262 7.855015 12.449947 12.771406 12.781632 7.990335 10.025668 11.558977 11.318679 11.172134 5.025667 8.463789 11.574138 11.838829 -1.513337 10.294669 9.323349 2.186944 4.746345 10.027122 11.145613 10.104895 8.979364 14.862652 10.277672 10.101679 9.222911 2.656428 14.880905 9.508183 13.099378 11.803639 10.028090 9.969821 8.141145 11.167739 0.84159000 1.51100000 1.50620000 0.00249690 0.00249690 0.00000000 -0.00249380 0.14384000 -0.02644100 0.52187000 0.52187000 0.52293000 -0.00631740 -0.00631740 -0.00788630 -0.00180140 -0.00180140 0.00027728 0.00027728 -0.00263220 0.00305220 0.51751000 0.04046800 0.04046800 0.04046800 0.00097064 0.00097064 0.00097064 -0.00567570 0.00638710 -0.00705760 -0.00429290 0.00249690 0.00000000 0.00000000 -0.00249380 -0.00390080 -0.26240000 -0.02644100 -0.02644100 0.51542000 0.50377000 0.55620000 -0.00498440 -0.00498440 -0.00498440 -0.00498440 -0.00631740 0.00819590 -0.00788630 -0.00180140 0.00027728 0.00027728 0.00027728 -0.00263220 0.00305220 0.51751000 -0.55637000 0.04046800 0.04046800 0.52888000 0.00097064 0.00097064 -0.00567570 0.00889200 0.00319100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 0.000 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 0.000 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 8.93772044 11.92413129 8.55663020 9.79371011 3.88602331 10.75065859 1.29384130 NA 8.95615106 8.67386131 -1.51333711 8.88952130 3.87882341 9.89907908 9.40983683 1.29384130 8.92113756 9.28983308 9.76959754 9.78686178 9.64153609 6.85719725 11.09845621 2.29387072 10.25964841 9.62989243 4.77191198 NA 10.66205877 3.57396826 12.72990641 11.72207477 7.70325508 10.15406442 7.81068987 8.83634328 3.65643917 1.07148811 0.07148811 9.84351142 7.93772044 9.37449136 10.02663728 5.47519516 7.91352853 5.84406170 10.54280824 7.67633371 9.44070558 -0.51354304 9.80448713 1.94594474 4.84405919 10.21678829 6.61156045 4.18695212 8.90646945 8.95818438 6.35069525 0.07148811 13.80938803 1.07148811 9.97183551 -1.51333711 8.45948900 6.32571380 8.00614540 8.27114411 12.610879 4.214428 8.795986 13.163844 10.187816 11.185214 12.782852 12.164119 9.314646 10.799109 13.708247 9.952586 8.912774 11.026395 -1.513337 7.539077 11.442704 11.1873824 7.5924174 9.0563649 9.0188653 7.9703251 10.6258687 6.6413278 7.7857173 11.1498450 6.5792661 3.2413979 6.4580522 6.0120300 12.4752827 10.3798108 8.9933126 8.4594890 10.8766782 6.0639386 10.2011841 10.3503084 10.7982576 10.1308162 10.6892453 8.9753536 0.8084262 9.1283442 8.0613107 5.2279759 11.1350916 8.0752240 10.6804319 10.3576445 7.8017265 13.8859875 9.8296950 10.3054908 13.1762343 10.6554947 10.2355406 3.0100637 TCGA-E2-A15E 40 0 NA 630 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 93.58.0 2 2 1 NA 2 1 3 3 2 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.118507e-07 8.343418e-08 11.5032464 8.2047692 6.5487988 11.6538151 NA 10.5002250 1.0174231 10.1722352 12.0151258 10.1220158 9.3449696 7.8150784 8.8939340 10.1128140 7.1048797 8.9076815 10.2353748 9.3859234 7.6358023 1.0174231 10.8098007 10.2474374 13.6080626 10.6639757 9.5700862 10.6051946 2.8247679 10.6348845 NA 2.8247679 7.6247472 13.3783327 12.7262854 7.6684688 14.3326374 13.2216061 10.3285977 6.8311983 4.7723027 6.5012321 8.9046376 10.0855236 8.2097097 12.4485229 4.1048818 9.5739230 12.9331097 7.7039174 9.3870144 11.2066239 7.4182962 6.4097337 -0.9825056 13.1475081 8.9903967 4.4097371 7.8020517 2.4768483 4.3028162 10.4230904 9.9939811 9.6042569 11.9407445 9.9694303 10.0659039 1.6023619 11.9078713 10.6576620 7.1873422 7.6612729 5.4268082 10.6630755 14.8884560 8.4035596 11.6182592 11.2465363 7.1620751 2.1873560 2.1873560 8.4645004 9.6845286 12.9512921 NA 7.6540416 7.3028189 9.1193928 11.7095966 9.8846957 4.9716125 4.8247729 10.7052301 11.8321998 1.8247679 13.5898804 6.7109042 7.2317358 12.7707383 12.3157661 13.0061905 7.6173301 10.4166949 10.8877817 10.6640748 11.3995006 5.8375951 8.8279886 12.5371761 11.3088756 NA 10.4278684 9.6693657 2.0174231 4.3050366 10.1544081 10.8703367 10.5796595 9.8336007 14.5534821 10.3760683 10.4701731 8.3460922 4.8753967 15.3098106 10.0174170 13.1028065 12.9779621 10.2498379 9.7376612 8.6394688 10.0214409 -0.120040 -0.032178 0.151590 0.159500 0.660870 0.128890 0.155470 -0.120820 -0.410690 -0.673250 2.049900 1.164100 0.094782 -0.024661 -0.119130 0.669000 -0.117830 -0.100130 -0.098945 0.136580 0.146370 0.170160 -0.413660 1.468700 -0.012024 0.125050 0.125050 0.042166 0.355940 -0.081206 -0.120040 -0.377970 0.149500 -0.117570 0.131990 0.103800 0.128740 -0.104080 -0.410690 -0.404620 0.164600 0.154120 -0.708910 -0.684600 -0.393630 -0.393630 -0.061286 -0.024661 -0.100660 -0.106840 -0.107100 -0.123170 -0.098945 -0.383020 0.143550 0.156360 0.166400 -0.412010 -0.413660 -0.106480 -0.101050 -0.404510 0.058652 -0.396420 -0.113120 -0.695140 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.139 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.156 0.156 0.000 1.142 -0.394 -0.394 0.000 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.139 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.156 0.156 0.000 1.142 -0.394 -0.394 0.000 8.29354154 13.05487821 7.56816363 10.03004165 3.18734020 10.47223044 0.60236186 0.60236186 8.61733008 8.22443152 -0.98250562 8.09423290 3.10487338 9.55269234 9.32689346 0.60236186 8.37496903 9.42998684 10.41080748 10.57056634 9.50181709 7.91223489 10.59484588 1.82476785 10.35559633 10.06590386 6.49315094 NA 10.52620226 4.37496990 12.80286952 12.07676153 7.80205166 9.82959431 7.49719719 9.59201052 8.02023215 1.01742311 0.01735184 6.23658637 9.09423264 9.17223522 9.50324636 5.32119935 9.26957392 6.83759640 9.90387582 6.00610275 9.66037123 0.60236186 11.28097968 2.47684825 4.66127075 9.72971182 6.66803826 2.33933695 8.83280048 7.25582172 5.66127360 NA 13.62994004 NA 10.48196276 -0.98250562 7.25103640 5.79877635 7.96578428 8.60987424 12.625442 5.061811 9.231736 14.332637 10.530651 10.417229 12.448523 12.531021 8.939377 10.842376 13.197248 11.451002 9.684529 8.219541 NA 7.357267 11.277454 11.219541 7.675628 8.709161 8.886239 8.328030 10.320861 4.994697 7.352807 10.663976 4.798776 5.061811 7.850307 6.922323 12.176973 10.039785 8.686302 8.862907 12.059589 4.476848 9.604257 10.138303 11.337089 9.981758 10.686302 9.076762 NA 9.581519 7.562458 5.374970 11.709597 6.125942 10.529664 10.705230 7.392457 14.195965 9.946675 10.175395 13.391641 10.158247 9.970158 2.017423 TCGA-E2-A15F 64 0 NA 658 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 3 1 5 NA 3 1 1 1 3 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 8.343418e-08 11.1966639 6.5962971 6.2962518 12.0956898 -0.2429768 10.6033666 NA 10.2185721 12.3425247 7.5417278 10.5069621 7.2246982 9.7141947 8.7228768 9.0969428 9.3570056 10.5285822 9.6893074 7.0835219 1.0790196 10.8701837 8.9444447 13.5481538 11.0168359 9.6856110 10.3174255 4.8863746 10.5161486 -0.2429768 2.3420427 7.6305365 11.6031707 12.8416520 8.7514460 12.7093789 12.0828198 9.6885689 6.0517136 3.5119740 9.0631543 8.8966439 7.8682281 8.2267344 12.2544456 1.7571086 10.2139605 14.5763238 3.5119740 9.9198743 11.5054952 8.0699755 5.0050182 NA 12.9743529 7.8966442 2.2165169 8.4816065 NA 3.6150749 10.7181806 10.4304017 10.9216854 10.6154623 9.6714777 9.8399070 0.7571086 11.9133338 10.9741416 4.7794594 6.8760343 1.5644269 10.9096944 14.1730985 7.9336647 12.3890654 11.3380578 8.6744649 -0.2429768 7.4644518 8.2267344 8.9345121 11.4960294 -0.2429768 4.5899851 7.9169638 9.9750503 11.0784571 5.4985604 6.2083046 3.7570979 10.4339313 11.5662579 4.0050226 13.4956072 5.8760331 7.4985596 12.2241887 11.5200975 13.0305969 8.9407279 9.0958290 11.0404705 10.4330497 11.3434634 5.4985604 8.8379101 11.1307735 12.2534472 -1.2429768 10.4112811 9.8014867 1.0790196 2.7580046 8.9182246 11.3107219 10.6707301 9.4339313 14.9169640 10.9438260 10.4977167 8.6714777 3.8014898 15.6465491 7.1833575 12.1578387 11.3188579 10.3226708 9.4250912 8.4009490 10.4792427 0.0142220 0.0142220 -0.0673620 0.0280910 -0.0554250 0.0619690 0.0082271 -0.5412900 -0.5185700 3.6569000 0.6249600 0.8408500 -0.1032600 -0.1070800 0.0669940 0.0669940 0.0669940 0.0689840 0.0689840 -0.0920990 -0.5815400 -0.0143350 -0.0088217 -0.0088217 -0.0088217 0.0117100 0.5935400 0.5531900 3.6569000 -0.1331700 0.0142220 0.0129650 0.0280910 0.0619690 0.0537050 0.0082271 0.0082271 -0.5412900 -0.5342800 -0.5113300 0.0621120 0.0549770 -0.6116800 -0.4755100 -0.4755100 -0.4755100 -0.4755100 -0.1070800 -0.1070800 0.0836640 -0.6007800 0.0689840 0.0689840 0.0689840 -0.0920990 -0.5815400 -0.0143350 -0.6026800 -0.0088217 -0.0088217 0.0202340 0.0117100 0.5531900 -0.4736100 0.0777500 -0.5510400 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.541 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.541 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 8.6119610 11.4627251 7.6669859 9.5335258 4.5592838 10.5712745 3.6639821 0.3420996 8.5724759 7.0790207 -1.2429768 7.3601623 2.6639821 10.7863799 9.5644475 1.0790196 8.4435934 8.9295203 10.4678992 9.6111818 9.8442439 8.1791572 9.9017509 3.2165169 10.1135446 9.8399070 4.0424955 0.3420996 10.8045575 3.4575286 11.2708203 12.6866285 6.2083046 9.6587138 9.9744446 9.7599077 3.9665504 6.5052860 -1.2429768 5.8863746 9.3030224 9.2796742 9.4250912 5.5644483 7.8502987 5.8966448 10.6833886 5.3116811 9.5052856 NA 10.4700495 3.0790196 5.5644483 9.8709651 7.0910979 5.6025816 10.2046925 7.2041759 5.7228758 2.4575418 12.9203492 0.3420996 10.3049512 NA 7.9859114 5.0969407 7.6907830 9.2469405 14.8283390 7.5119803 9.1979619 12.7093789 10.0343104 10.2972208 12.2544456 12.5674635 9.3579348 11.2546951 12.7848259 10.5704731 8.9345121 7.0835219 0.3420996 7.3973375 13.0045010 10.8636556 6.5449953 9.2031422 9.3800597 9.1234148 9.9761220 6.2489465 8.3231467 11.0168359 5.6759570 3.0050226 4.1494138 7.8241772 11.7343726 9.5844353 10.5425452 8.8616915 12.7706771 6.4009494 10.9216854 10.1445716 10.9096944 9.3588635 10.6420263 8.6366761 0.7571086 8.5899986 6.0424955 7.2569389 11.0784571 5.9567653 10.3611825 10.4339313 7.0005995 12.7443567 9.6774455 9.6096222 13.1727684 10.0396021 9.3088009 0.3420996 TCGA-E2-A15G 76 0 NA 554 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA mixed histology (please specify) no 0 white not hispanic or latino 93.58.0 5 5 3 NA 2 1 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.21416e-06 5.897349e-07 10.5984339 5.1888519 8.0008310 11.2994895 -1.2870081 10.8783399 1.8830342 9.8767685 12.3301271 10.0794410 10.1893588 8.4359265 8.9395310 8.7046406 8.2405958 9.3139609 10.9485348 9.7088859 6.4135585 0.2980717 11.2189304 9.0673682 13.8656018 11.1674181 9.3828898 10.8864837 4.2677081 10.7330570 -0.2868321 1.8830342 6.5773049 10.8726749 12.6116258 5.4545872 12.9468134 13.9547297 8.4204782 7.2009584 5.0529679 4.5711003 8.5252961 9.3881938 5.6200086 13.5398659 3.1054434 10.1256887 14.2241920 6.8216439 9.5555949 11.2052224 6.0168996 7.1182600 NA 13.2426720 7.9586716 0.2980717 7.3855441 NA 3.5204725 10.0794410 10.2551833 10.5773050 12.0220267 10.2566341 9.2905477 2.6199998 11.8928725 10.3908385 6.9127912 8.5460089 0.7130799 12.2402293 14.1418389 9.6995369 11.9641574 11.1594268 8.4461342 1.0350608 4.8830440 8.8372400 9.0168996 12.2993723 0.7130799 4.2677081 7.7271390 9.2179378 11.2931418 6.8880443 4.4680033 3.4680098 10.4135585 12.2341058 1.5204977 13.3490636 7.6961121 8.0946620 11.6545333 11.9268306 13.0320147 8.1928994 10.3673073 10.9035609 10.8670983 11.6079366 5.3855449 9.1674181 12.5618396 10.6482839 NA 10.3921591 8.8767686 -0.2868321 4.5072745 9.7758395 10.9347059 10.1699866 9.3148895 14.7805742 10.0788945 9.5648678 10.0524121 1.5204977 15.8728818 10.1761322 12.9399073 11.3793428 10.5621329 10.1113281 9.2119681 11.1798938 -0.03378000 1.05530000 1.06300000 0.21049000 0.23673000 -0.09288300 0.33900000 0.00930030 0.00068386 -0.00803370 -0.00803370 -0.00803370 0.26309000 0.13789000 -0.14773000 -0.14773000 -0.16916000 0.27750000 0.32430000 -0.17082000 -0.05200100 -0.11169000 -0.12682000 -0.12682000 -0.12907000 -0.07748700 -0.07748700 -0.07748700 0.02439800 -0.03109500 -0.03378000 -0.08294300 0.23673000 -0.09288300 -0.09288300 0.33900000 0.33900000 0.00930030 0.00930030 0.00068386 0.22436000 0.22436000 -0.00803370 -0.08608400 -0.08608400 -0.08608400 -0.01795000 0.15151000 0.22575000 -0.16124000 -0.16916000 0.27750000 0.32430000 0.32430000 -0.17082000 0.32929000 -0.11797000 -0.44253000 -0.12682000 -0.12682000 0.20885000 -0.07748700 -0.07748700 0.00000000 -0.11836000 -0.60499000 0.228 0.228 -0.148 -0.148 0.324 0.324 -0.171 0.329 -0.118 0.889 -0.443 -0.127 -0.127 0.209 0.209 0.000 0.000 0.000 1.055 0.000 0.000 -0.118 -0.594 -0.125 -0.125 0.237 0.237 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.228 0.228 -0.148 -0.148 0.324 0.324 -0.171 0.329 -0.118 0.889 -0.443 -0.127 -0.127 0.209 0.209 0.000 0.000 0.000 1.055 0.000 0.000 -0.118 -0.594 -0.125 -0.125 0.237 0.237 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 7.7818973 11.5591969 8.5538969 9.5934677 1.7592411 10.9023257 2.2980717 -1.2870081 8.7697565 7.7327095 NA 6.2905479 -0.2868321 9.7684012 9.5827127 0.7130799 7.1097241 9.0350470 10.2933774 10.3415644 9.7233813 8.3351706 10.4779904 2.8830342 9.6245109 9.2905477 9.1591682 -0.2868321 10.3695437 2.8830342 12.7187434 11.6778207 7.4444377 10.0810795 7.6109643 8.9004711 3.1054434 -1.2870081 NA 4.8216439 8.9103354 9.4829568 10.6368177 3.2980864 8.8492127 5.8005816 10.1622674 6.3569748 9.1150650 NA 11.6680422 2.4135670 4.3569748 9.9639857 6.5236905 1.7131239 9.3360859 7.5988155 5.2209142 NA 13.8783792 -0.2868321 10.4282229 NA 8.2425496 5.0706727 7.8603235 8.3055757 13.384192 3.520473 8.504282 12.946813 10.423495 10.692544 13.539866 12.942689 9.088158 11.020035 13.011253 9.841758 9.016900 8.834652 1.713124 7.673121 11.387753 11.1330790 8.2657880 9.0837955 9.5888683 8.2209137 10.6656090 6.3996189 8.7872604 11.1674181 5.7792072 1.7131239 6.4410385 6.9971332 9.7060572 9.9328924 8.5570397 8.2464485 12.6245108 3.6200116 10.5773050 10.7271394 11.6153055 9.4969356 10.8942711 9.1786853 NA 9.4573472 7.2286215 3.8424057 11.2931418 5.3424765 10.6604965 10.4135585 7.3055757 13.9060281 9.9509263 10.2054728 12.8688067 10.3529118 10.2590486 0.7130799 TCGA-E2-A15H 38 0 NA 393 breast stage iia t1c n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 93.58.0 2 2 1 NA 2 5 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.112456e-07 11.6152725 5.6640334 5.7742178 10.7679047 -0.3132978 10.6986802 -0.3132978 9.7814917 11.7526751 13.3549743 10.1725834 8.1806094 8.8069919 9.3060571 7.1003817 9.5188530 10.1389954 10.0465037 6.8616800 1.4941083 10.6427673 9.8011472 13.8054519 10.7728904 9.6733073 10.9376447 4.9155735 10.3069419 0.6867918 1.6867470 6.7689028 11.7372831 12.7956053 7.2641827 16.0004698 13.6062227 9.9125641 6.7091224 3.2717095 5.6867554 8.4163749 8.6394956 8.0596192 12.9256067 4.0443067 10.7565396 14.2638289 3.0086841 9.2249430 11.4233675 7.2866668 8.6453068 3.7742178 13.1001791 9.9125641 3.4941083 7.5876208 NA 3.8566770 9.7440691 10.5133026 9.1885913 10.6835807 9.5053364 9.6518170 0.2716647 11.0812168 10.0349291 5.6867554 8.2660702 2.4941083 11.4116943 15.0046967 8.5882998 11.1085560 10.5792970 7.4681141 1.8566670 -0.3132978 8.6365808 9.0887003 10.2181356 NA 5.4282228 8.0199093 8.8937684 10.9456146 7.2866668 4.3591768 4.2103187 10.6413140 11.9571955 3.4416428 13.9997434 6.3378056 7.0747719 12.1364187 12.9166244 12.5266468 7.7608956 11.1148525 11.1538502 10.8187140 10.6958829 4.4416428 9.3697487 11.7903698 10.7791810 0.6867918 10.3644738 9.2112958 1.0087020 2.9399788 9.3529781 11.2100711 10.6765034 9.0585308 15.1046396 10.9323068 8.7978897 9.0376933 2.0086662 14.7747970 8.3014642 12.5597175 11.5667202 10.5513272 9.3115497 8.3871941 10.9414787 0.04897100 0.74575000 0.74575000 0.00692030 0.00917030 -0.33067000 0.02707600 -0.23937000 -0.68524000 -0.70980000 -0.69260000 0.70251000 0.00077922 0.00077922 0.00708240 0.00708240 -0.01950000 0.03848900 0.02286900 0.02932500 0.05922300 -0.30251000 -0.63925000 3.65690000 3.65690000 -0.60999000 -0.64243000 -0.64243000 0.11580000 -0.65650000 0.04897100 -0.31780000 0.01112100 -0.31576000 -0.33067000 0.02707600 0.02707600 -0.23937000 -0.68524000 -0.68524000 -0.16663000 -0.20440000 -0.72718000 -0.68606000 -0.68606000 0.02244400 0.02244400 0.00077922 0.01209700 -0.00027269 -0.01950000 0.03848900 0.02286900 0.05409100 0.02932500 0.05922300 -0.31707000 -0.31303000 -0.63925000 -0.58009000 0.04159900 -0.60999000 -0.64243000 0.11580000 -0.67334000 -0.66772000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 8.3923866 13.7036060 8.3051397 9.6676078 2.6867470 11.0335449 0.2716647 -0.3132978 8.8365014 8.0376935 1.2717245 7.5230256 1.8566670 10.4412242 9.0321593 2.0086662 6.9582174 9.7715626 6.1705701 10.1999882 9.7272563 7.2413426 10.2646550 -0.2917686 10.4742486 9.6518170 5.4146734 -0.3132978 10.2829440 2.7742072 12.7650718 11.8629273 7.5815719 9.4949140 7.6951830 8.7978897 5.2103148 -1.3132978 -0.3132978 3.3306158 8.6993788 9.7635698 10.1895859 2.5936406 9.0892012 7.2413426 9.9848167 5.5693969 9.7201772 -1.3132978 12.1222942 2.3871971 4.5936466 9.5864208 6.7547259 5.2717170 8.6711727 7.0530766 8.3627114 1.2717245 13.8125308 -1.3132978 10.7132776 1.0087020 8.8043973 3.6409448 7.4844153 8.9323069 13.297375 5.915573 8.735241 16.000470 10.750823 11.238462 12.925607 13.030773 9.187596 11.004732 13.304566 11.309721 9.088700 6.587622 3.330616 9.833323 11.521028 11.4220986 6.3941128 9.5196441 8.9939551 8.3288060 11.1711567 5.2566107 9.3179313 10.7728904 6.1130191 3.7311507 7.9859620 8.2828878 10.8560528 9.9950931 9.6547008 9.7748798 10.9970829 6.0443067 9.1885913 10.8153930 10.8437853 9.5509403 11.0044494 9.4713891 -1.3132978 9.9488667 7.2566097 6.3732549 10.9456146 6.9859626 10.8669741 10.6413140 7.8765790 14.2752638 9.7440691 10.2152083 12.0130432 10.1109204 10.0437562 -0.3132978 TCGA-E2-A15I 44 0 NA 530 breast stage iia t2 n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 103.51.0 5 2 2 2 NA NA 3 4 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.113666e-06 7.230962e-07 10.1631954 7.3284712 8.2833829 11.1542788 1.0837240 11.3836818 1.6686638 10.0869943 12.3089181 12.5631541 9.7251604 9.0771209 8.9835711 8.3332193 8.7045414 9.5127685 11.4927479 9.6248073 7.6459531 3.2536414 11.8387373 8.6971931 13.2831785 11.3091189 9.6573578 10.7069824 6.0301286 10.6257751 -1.5014428 6.8296644 8.3691127 12.8507226 13.3899148 6.5485969 13.1423789 12.8788033 9.4874329 5.9825647 3.4056384 6.0761764 9.0865256 10.7024020 7.8296650 13.3827755 3.7081983 9.4093909 14.4008877 9.1631955 8.6038318 10.9966000 5.0686020 7.3905318 0.0836559 14.0675198 9.7179166 1.8206896 8.2043804 -0.5012385 4.4529446 10.5742273 10.4011232 9.7233527 11.7906383 10.5179914 9.2486176 2.4987359 12.7131432 10.2842006 7.1782286 8.1317433 11.9747348 11.0844149 13.6190265 8.1806715 11.3540060 11.6201198 9.2710626 1.3060872 0.8206487 8.1480042 8.7383467 12.6120833 -1.5014428 4.6885720 6.9208125 9.3004564 11.8505156 12.3889174 7.1497999 4.1711748 10.6642833 12.2108452 2.4987359 13.0718627 6.6280314 8.4250442 12.0820660 11.6497647 13.3793361 7.5458719 10.2074009 10.9181817 11.2219376 11.5936506 5.3567284 8.5954634 12.1337860 10.5022660 -1.5014428 9.9860858 9.0837107 0.8206487 5.0865630 9.8025288 10.2792879 10.9714389 9.5431422 14.5381813 10.3575063 10.0055516 9.9354596 4.1711748 15.1982393 10.6830036 13.0133389 13.5543271 10.3089180 10.1996213 8.7537767 10.2979002 0.01070300 0.01070300 0.00642520 -0.01147300 -0.01147300 -0.01601700 -0.01202400 -0.00443120 -0.00443120 -0.01601700 -0.01601700 -0.01601700 0.00658250 0.00658250 0.00350090 0.04514100 0.00141760 -0.00154000 -0.00154000 0.74518000 0.46997000 -0.02151000 -0.00843850 -0.00843850 -0.00843850 0.04982400 0.04982400 0.04925600 0.02876300 0.05965100 0.01070300 -0.00990420 -0.01147300 -0.01601700 -0.01601700 -0.01202400 -0.01202400 -0.00443120 -0.00443120 -0.00816220 0.47821000 0.47821000 -0.01601700 -0.01185600 0.00000000 0.00000000 0.00000000 0.00658250 -0.00177080 0.00350090 0.00141760 -0.00154000 0.01474900 0.01474900 -0.01739100 0.49286000 -0.02151000 -0.51105000 -0.49110000 -0.00843850 0.00097064 0.04982400 0.04925600 0.02876300 -0.01387500 -0.47997000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 9.2735352 11.8658898 5.9744811 9.1965844 4.9581792 10.4884974 4.7655347 0.8206487 8.7933689 6.7419226 -1.5014428 7.9581797 -0.5012385 9.5099755 9.6910410 1.4987615 9.3117277 9.5155564 10.9123761 10.8601436 9.9447716 8.4086414 9.7520047 2.8910692 8.9855833 9.2486176 3.5431370 -1.5014428 10.2532182 2.3061164 12.7295191 11.8167260 7.3965937 10.3149318 7.9724537 8.6370200 3.6686751 0.0836559 0.4987615 9.7841504 8.2751812 8.9704234 11.3157317 5.1134588 7.9377893 5.2129934 9.6382994 6.3252965 9.6150922 -0.5012385 11.7069825 3.0223145 5.0533373 10.3154838 5.8147119 6.2061079 8.8263009 7.5594444 6.3442373 0.0836559 13.4320699 0.8206487 9.8937467 NA 8.3504972 5.6984213 8.2078319 8.9975973 12.475565 3.253641 8.786460 13.142379 11.166525 9.628675 13.382776 12.538695 9.544672 11.086760 13.377326 9.374497 8.738347 8.298030 1.083724 7.588861 12.094472 11.142604 8.138993 9.352837 9.193976 8.255304 10.884654 7.375265 7.966354 11.309119 5.617689 1.306087 5.171175 5.693111 10.473163 10.618013 8.621576 8.120800 11.882047 7.076177 9.723353 11.011982 11.840823 9.774873 10.715191 9.262790 -1.501443 9.550236 9.449807 7.334799 11.850516 7.420589 11.007533 10.664283 7.444192 13.652261 9.903890 10.572555 12.806234 9.950474 10.118051 2.820669 TCGA-E2-A15J 51 0 NA 590 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 5 2 2 2 2 1 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4.727937e-07 1.39057e-07 10.78402206 0.82113874 7.95246870 11.34292275 0.08420036 10.80554454 -1.50062605 9.60314135 12.01575979 12.40081912 10.20439838 7.67412375 8.25742132 8.92231383 7.90220988 9.09072034 10.12216485 9.46281654 5.70865077 NA 11.18131472 10.75776401 12.37321873 11.89860940 9.33208803 10.39325777 2.40610124 10.53740703 NA 1.30655390 6.59723021 10.93980765 13.26888085 7.53537181 13.26453584 13.12016231 9.10929996 8.47647769 4.52156589 6.38184054 8.10837652 11.36512450 5.79381787 12.53227675 0.08420036 10.40232663 14.14654394 4.94213912 9.85931534 10.92572481 6.24739020 4.97493306 NA 13.26587126 10.02079845 1.49922085 7.83011459 NA 3.14305050 9.73760261 11.36821336 10.49849332 11.55583566 10.29604872 9.75304539 6.22711916 11.38660900 10.44061247 7.33208758 8.40759069 12.42484511 11.55193580 15.22973442 7.03174917 9.41133874 11.32475307 7.55718950 2.82111832 5.42993392 9.01981671 8.71473080 10.57768241 NA 4.85675169 7.47647809 8.70986924 11.05282722 10.40081914 4.05378907 5.84792677 10.41283539 12.25450284 -1.50062605 13.23253110 6.03057886 7.37878124 11.58284349 12.58384027 13.01360380 7.50482216 10.48717248 11.18547962 10.52187443 11.53193246 5.33208848 8.88506029 13.15629305 11.32872249 NA 10.35912096 9.45775064 1.49922085 3.43513517 10.02079845 11.56124407 10.25617118 9.16985412 14.61832145 10.26986187 9.93434724 9.13037493 0.82113874 16.36052722 9.26241037 13.64481173 12.53210463 9.76305398 9.46281654 8.11758337 10.74442973 0.87129000 1.42080000 1.46680000 -0.01161100 -0.01161100 -0.01761600 -0.02967500 -0.00788630 -0.00788630 -0.83130000 -0.83130000 0.75337000 0.00847430 0.00847430 0.00214920 -0.00041585 -0.00041585 -0.00553750 -0.00553750 0.00597000 -0.00223270 0.01140000 0.00638710 0.00638710 0.00638710 0.00903120 0.00903120 0.00903120 0.01908300 -0.00110870 -0.01491600 -0.00899060 -0.01161100 0.00208050 -0.01422800 -0.02967500 -0.01546600 -0.00788630 -0.00788630 -0.00788630 0.02567100 0.01103800 -0.85039000 0.00166420 0.00166420 0.00166420 0.00166420 0.00847430 0.00847430 0.00214920 -0.00041585 -0.00553750 -0.00553750 -0.00553750 0.00597000 -0.00223270 0.01140000 -0.83970000 0.00638710 0.00638710 0.01419000 0.00903120 0.00903120 0.01908300 -0.09749500 0.03256300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.087 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.087 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 7.12124961 12.29117476 6.59195462 9.18306985 3.45339905 10.95118176 0.49916981 NA 8.46786472 7.56528719 NA 5.61813879 -1.50062605 10.41208732 9.09911080 1.08413231 5.77532188 8.94421278 11.45829428 10.94084535 9.72046488 7.31937678 10.39515183 1.49922085 9.38260501 9.75304539 8.84460315 NA 10.56965438 2.95863855 13.95163226 12.11643582 6.53262087 9.84182818 7.71351712 9.33050529 3.70865077 2.49919533 -1.50062605 6.00699362 8.99904390 9.52779464 10.03350078 1.82113874 8.13747073 6.91282588 10.65306656 7.52986544 9.62525715 NA 8.26738223 1.30655390 4.80297899 9.79447906 7.05631690 NA 9.05857491 6.89580307 4.60772090 -1.50062605 14.56587580 0.08420036 10.06287090 -0.50083019 7.71594346 4.49919533 7.91282588 9.03057941 13.042885 4.784598 9.276453 13.264536 10.298075 11.457569 12.532277 12.924938 9.527104 10.651800 14.067629 11.565287 8.714731 9.244872 3.143051 7.260749 11.247600 11.146207 7.143055 9.006992 9.164534 8.598546 10.424166 5.441713 7.381841 11.898609 3.499195 -1.500626 7.322565 6.140310 10.632019 9.720785 8.826593 8.311375 12.821267 2.499195 10.498493 10.258670 11.418806 9.830675 10.853723 9.134009 -1.500626 9.382567 8.955172 1.306554 11.052827 7.524337 10.767129 10.412835 7.535372 14.915187 10.283833 10.443910 13.319327 10.446470 10.034473 1.306554 TCGA-E2-A15K 58 0 NA 275 breast stage iia t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 96.50.0 5 5 2 2 2 2 1 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.065304e-07 1.668684e-07 10.6758021 6.5859750 7.7793379 11.0972388 NA 10.2314391 0.6144743 9.5569455 11.9862075 9.0501011 9.5766040 7.6340218 9.1082863 9.2528669 8.0195724 9.8911369 10.3998834 9.6464766 6.6858939 5.3286749 11.0351807 10.2663796 13.3562665 11.4302144 8.9807531 10.5838175 7.4023333 10.2147899 NA 2.6144272 8.2921504 11.2036139 12.2388837 6.4661801 13.0027846 12.8611715 8.7955832 5.8335985 2.4217754 5.2582852 8.3957907 10.0013712 6.0901654 13.1920958 2.0738545 11.5908160 13.7829072 6.7488570 10.1982376 10.5031742 5.1222254 7.0982469 NA 14.4417461 10.1579364 1.6144272 7.3113987 NA 4.3693199 9.5220726 10.5276944 10.4836392 11.2877400 10.0328107 10.0784660 0.1993740 10.8823880 10.2328164 7.8456519 8.7216481 2.5213272 11.0320198 14.7740264 6.0615969 11.3686921 10.9886554 9.2510556 -0.3855257 NA 6.3009309 8.1042790 12.5695359 -1.3857142 5.0573723 7.3759821 9.0553001 10.7724093 5.1062855 6.8718190 5.5917123 10.7284985 12.0268684 4.7437142 13.5781398 6.5273206 7.2726428 10.9456278 12.6900772 13.0361670 8.8323885 10.4217859 10.7114754 10.6540492 11.2487882 4.5213209 8.9664743 11.7391984 9.4970740 NA 10.2328164 8.7268704 0.6144743 3.5690900 10.0753987 10.8211401 9.9481454 9.0375470 14.6086738 9.8165547 9.5909951 9.3209269 2.1994054 15.2475822 10.5399853 12.9846415 11.0894043 10.2373978 9.7949616 8.4120926 10.6063743 -0.02294400 0.58274000 1.15640000 0.00249690 0.00249690 0.00388540 0.00694350 0.00000000 0.00000000 -0.63878000 -0.03245000 0.00471900 -0.01664100 -0.00498440 0.00124810 3.23290000 -0.67012000 -0.00705760 -0.00705760 0.00069327 0.58614000 -0.01684100 -0.03472300 -0.03472300 -0.03472300 -0.07187300 -0.07187300 -0.07187300 0.15024000 -0.02294400 -0.02294400 -0.01876500 0.00249690 0.00388540 0.00986690 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00166290 -0.00166290 -0.68003000 -0.01202400 -0.01202400 -0.01202400 -0.01202400 -0.00498440 -0.00498440 -0.05209500 -0.64631000 -0.00705760 -0.00705760 -0.00705760 0.00069327 -0.03871400 -0.01684100 -0.70136000 -0.03472300 -0.03472300 0.00374650 -0.07187300 -0.07187300 0.15024000 0.00138680 -0.04251700 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 -0.292 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 -0.292 9.7986864 13.0517278 1.4218023 9.8510431 3.4936473 11.0021790 4.1379953 NA 8.7216481 7.0490589 NA 6.5859750 0.1993740 10.1923318 9.5137878 4.1062813 9.5773269 8.7641779 7.8670965 10.5747949 9.8829261 7.5362721 10.4677404 0.9363647 9.9004110 10.0784660 3.2582928 NA 10.7219750 1.9363647 12.0275299 12.0944637 6.9363588 9.8928803 8.2708559 9.3026812 0.6144743 2.9363647 0.6144743 5.5332955 8.5816570 9.8659132 10.3892180 3.7843574 8.1506394 7.2068884 10.4928650 4.9182097 9.6512914 NA 11.7052050 2.7843574 3.6588284 9.5394882 7.0261117 6.7893563 10.0850897 8.2124833 8.1728515 -1.3857142 13.2965477 0.6144743 9.9164986 NA 7.8311767 4.1062813 7.3826154 8.6200556 14.189775 5.647853 8.783103 13.002785 10.666727 11.041744 13.192096 12.276766 9.179171 10.514920 12.934738 8.512276 8.104279 8.735964 1.936365 7.680520 11.163734 11.0240870 7.7616357 9.2189841 9.0375470 9.5735273 10.9309076 7.7488570 8.0448837 11.4302144 4.4217888 0.6144743 5.1062855 7.7592930 9.5145431 10.3705703 8.8835576 8.6464766 11.2189841 7.5627980 10.4836392 11.1586709 10.7108167 10.3213586 10.5359000 8.0738625 -0.3855257 8.8529074 7.5757941 8.4409796 10.7724093 6.0322838 10.6050064 10.7284985 7.3693182 13.4816131 10.2636870 9.9176409 12.7860769 10.7310998 9.6608728 1.6144272 TCGA-E2-A15L 65 0 NA 626 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 black or african american not hispanic or latino 93.58.0 5 5 2 NA 2 4 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 5.562279e-08 10.87961526 4.18454215 7.72451454 11.44143109 0.35162833 10.62661006 0.35162833 9.95759210 11.79277822 10.57986707 9.84199906 7.48607557 8.38093676 9.48671759 8.53280201 9.30366273 10.94013004 9.83999186 7.15254952 1.67355642 10.64022731 10.38644852 8.78731981 10.94853814 9.82991360 10.31056473 2.93660967 10.55070841 -1.64837167 -0.64837167 8.09648325 11.72519450 13.01309371 7.48864033 12.82478456 13.10575418 9.30875175 6.37955512 2.25854907 6.57081810 8.28238698 9.60017012 8.31743387 12.66304317 1.35162833 10.13996006 13.15229677 6.47577071 9.47765062 10.90503893 6.77791412 6.76950200 -0.64837167 12.97658154 8.21118454 -0.06340917 8.30001662 NA 4.20963272 10.18453967 10.98736770 10.35164964 11.25327076 9.90959192 9.73102792 -1.64837167 11.63314505 9.87423107 6.65085788 8.23734622 1.81110106 10.37990109 15.01888592 9.84904239 12.11112175 11.48382797 7.94783912 1.35162833 4.30584652 7.36007803 9.06846902 11.98407690 0.67355642 7.30001662 6.88692443 9.17581274 11.20398404 5.02407584 4.79459262 4.52157217 10.55377346 11.72723212 1.52155333 13.72274558 6.54147457 7.60903760 13.26547399 13.22907754 13.10361202 8.01342764 10.26715560 11.00157934 10.57542806 11.12355168 4.95156448 8.27051306 12.31571968 9.39809166 0.67355642 10.34988738 9.50710028 -0.64837167 3.09312068 9.92671614 10.93872392 10.23848929 8.76844703 14.40139182 9.92529673 9.34033438 8.93190817 4.67357904 16.67713514 9.77686545 12.80105623 12.97906950 9.82129136 9.34741674 7.78836141 10.43000723 1.4490e-02 6.8367e-01 6.9180e-01 7.2710e-01 -1.0412e-02 -1.3168e-02 1.3954e+00 -9.5839e-03 -9.5839e-03 -9.6848e-03 -9.6848e-03 -5.0258e-03 1.0104e-02 1.0104e-02 6.6237e-03 6.6237e-03 6.6237e-03 3.0106e-03 -1.8011e-04 -1.4682e-02 0.0000e+00 7.1503e-01 3.1955e-02 3.1955e-02 3.1955e-02 3.6328e-02 3.6328e-02 3.6328e-02 3.0127e-02 1.4490e-02 1.4490e-02 -8.0514e-03 -3.0889e-03 -1.3168e-02 -1.3168e-02 -3.0444e-02 6.8044e-01 -9.5839e-03 -9.5839e-03 -1.7020e-02 -6.9608e-03 -6.9608e-03 -9.6848e-03 1.0661e-02 1.0661e-02 1.0661e-02 1.0661e-02 1.0104e-02 1.0104e-02 6.6237e-03 6.6237e-03 3.0106e-03 -1.8011e-04 -1.8011e-04 -1.4682e-02 1.1637e-02 1.8061e-02 -7.1719e-01 3.1955e-02 3.1955e-02 -4.1488e-05 3.6328e-02 3.6328e-02 3.0127e-02 5.2333e-03 3.6752e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.46148027 14.44844711 6.42846570 10.04164752 2.05210284 11.04164759 0.35162833 NA 8.42579119 7.96451820 NA 8.73427370 -0.64837167 10.30911444 9.14362632 1.52155333 6.25251595 9.47188754 11.69899413 10.46766862 9.50639169 7.92150536 11.23982208 0.35162833 8.88789686 9.73102792 2.43911777 -1.64837167 10.18453967 2.15901555 12.70823913 12.11538067 6.99189480 10.00628568 6.50139615 9.09058618 4.15900748 1.52155333 -0.06340917 5.72668956 8.80389087 9.47059075 10.28238698 3.15899940 8.58500571 4.98100779 10.28423349 5.41773777 9.77266246 NA 11.51293898 4.43911112 3.96635663 9.94386830 6.39429462 4.92150298 8.91389199 7.44704685 8.82332488 NA 13.83398491 0.35162833 10.08296864 NA 6.55132221 3.93660967 7.67132168 7.95156273 12.683855 4.906236 8.626610 12.824785 10.209879 10.741819 12.663043 12.874721 9.231998 10.768711 13.730656 10.451655 9.068469 8.726689 4.234294 7.639362 11.461643 10.989180 7.944106 8.829408 9.165431 9.473183 10.224863 5.717972 7.503935 10.948538 5.627773 3.906236 7.433799 7.087713 11.337314 9.751995 8.362877 8.289759 11.767523 3.396050 10.351650 9.919606 11.389883 8.680325 10.349887 9.250251 NA 9.590335 10.099935 6.009862 11.203984 8.229700 10.536525 10.553773 7.305846 13.861765 10.251384 10.567789 13.134443 10.060302 9.692056 1.351628 TCGA-E2-A15M 66 1 336 235 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 93.58.0 8 2 4 NA 3 4 3 3 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.595753e-06 5.550446e-07 11.17240376 10.53438635 7.28676012 10.63886296 1.18205661 10.97822903 1.18205661 10.52351021 11.70863008 7.49244849 9.74809588 7.92105542 8.92166899 8.82261544 6.49410035 9.72225801 9.27863739 10.49739741 8.67316630 5.64147378 10.29317756 8.50642700 10.92182249 10.84317219 9.96250709 10.86120208 7.24421064 10.85060466 0.04460395 0.04460395 10.67934946 11.82475004 13.07840873 8.68188774 13.28112070 13.66345151 9.09384245 4.11492500 -0.69245490 6.55866101 9.24666223 9.88185088 6.80475960 12.61211427 1.04453401 11.39514615 12.99556806 3.47749601 9.19326908 9.98881120 9.90717580 5.14046375 0.30754510 14.83373303 9.58238966 2.72261903 8.82851893 NA 5.45053165 10.30804238 11.19212492 9.88405708 11.25472264 10.41522585 9.45180620 1.72259717 11.37567927 9.79340205 5.12348825 8.06134689 0.30754510 11.43771431 14.37931447 8.62432209 11.22245616 11.19441251 9.78701627 1.30754510 2.36647609 8.89316135 10.04819681 11.97261257 -1.27753398 5.30757424 6.58059173 11.25118650 11.44744385 7.98235363 8.29531069 5.52350864 10.97512787 12.13980355 1.52997083 13.79256348 3.81007287 8.29720380 11.95045183 10.50335510 13.14900610 6.82851861 9.68442165 11.03265499 10.49466501 11.26019271 5.84155051 8.17279051 12.20327431 11.18664546 1.52997083 10.00916813 9.55747634 0.52997083 3.63214023 9.99319769 10.61135352 10.71430932 9.30003905 14.82284144 9.80176170 10.63287827 11.04636875 3.47749601 15.18528830 7.56653130 13.01952651 12.14723590 10.22320327 8.82392956 9.00222094 9.53460715 -0.0094046 0.3996100 0.9253300 0.0389620 0.0147490 -0.0780110 0.4391900 0.1869200 0.1869200 0.2951700 0.2951700 0.5620500 0.2741100 -0.0138610 0.2621600 0.7617800 -0.2240000 -0.1593700 -0.0313590 -0.1801700 0.0310140 -0.0231550 -0.2452900 -0.1190000 -0.1190000 0.2262300 0.2262300 1.6130000 0.5225800 -0.0094046 -0.0094046 0.0366530 0.0389620 -0.0780110 -0.2171800 0.4391900 0.4391900 0.0840550 0.1869200 0.1869200 0.2772600 -0.1611500 0.0209030 0.0244940 -0.0953840 -0.0953840 -0.0953840 -0.0138610 -0.0138610 -0.2815600 -0.2240000 -0.1500900 -0.0313590 -0.0313590 -0.1825300 -0.2455700 -0.0231550 -0.2232900 -0.2452900 -0.1190000 0.2801000 -0.3203000 0.6710400 0.0000000 0.2728500 -0.2456900 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 10.3868353 12.2839579 6.0535263 10.0209592 4.6546475 10.4182736 3.4774960 2.3075742 7.7697341 8.8767956 -0.6924549 8.9068596 4.2924652 10.5078585 9.3714173 0.8925076 11.1846013 9.9891041 8.7352348 8.4982205 8.9901987 8.8127228 11.1907252 3.2272328 7.8376538 9.4518062 4.0080117 0.3075451 10.1224223 3.6294965 12.4304547 12.1940950 9.1593219 10.5397938 10.2104504 8.8258982 6.9870525 1.3075451 -2.2771843 3.5554972 8.5712331 8.7183774 10.4676544 7.4758274 6.2761635 4.8100729 9.9826477 6.0490404 9.4282427 0.3075451 11.5061202 3.1820407 4.6651255 9.6583315 5.1090763 6.9964057 9.5263378 10.1727905 7.5867963 5.8258975 14.0413473 2.0445340 9.9399622 NA 8.5906611 6.2733574 8.3066332 8.1727905 12.2755969 7.2539921 8.1160008 13.2811207 10.5471713 11.1833221 12.6121143 11.3760152 8.9047252 11.1946664 13.2708603 10.1835781 10.0481968 9.1593219 -0.6924549 7.8087467 11.8959751 10.615912 7.421315 9.336400 8.059117 8.712005 10.230189 8.154108 8.496574 10.843172 6.269504 4.026393 5.767003 7.537417 11.108742 11.179478 8.199356 7.438572 12.891243 8.064685 9.884057 10.831788 12.062043 9.686229 10.642405 9.422183 1.629520 8.811829 8.993863 7.605254 11.447444 7.171759 10.373662 10.975128 7.515400 13.916210 10.578647 10.651684 12.292407 9.622345 9.923202 4.517024 TCGA-E2-A15O 89 0 NA 396 breast stage i t1c nx m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 85.58.0 3 1 1 NA 2 1 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.946798e-07 10.8209797 4.3934025 7.9449761 11.7488805 NA 10.7789662 NA 9.6036176 11.0507708 9.1207866 10.6446734 8.1701234 8.6722591 9.3986941 7.1721855 9.2736436 9.8222937 9.1014355 6.2908298 4.6751723 10.4373653 8.5695974 12.9762244 12.6892813 9.3068760 10.4369365 5.1472375 9.4766966 NA 0.7209788 6.6634884 10.9160391 11.6636723 5.6398370 12.4198962 13.6295079 9.6043814 7.9279889 4.3648315 8.8150521 9.2822626 9.0281754 6.2523551 12.9951342 4.5283275 9.8757927 13.6950305 3.5283338 10.3744510 11.3215843 6.6693415 5.0429026 NA 13.0687862 8.5805092 1.0429244 8.6097177 -1.2789336 3.0429069 9.9539949 10.5890253 10.2173290 11.0034838 10.2917790 9.4048463 3.8084365 11.2939115 10.4994623 6.6457867 6.8502581 3.3059413 12.1065673 13.8298256 9.2992811 11.8489688 10.9918538 8.3283047 1.8909136 3.1132838 8.3863105 8.1282424 11.8786372 NA 5.0960130 7.3827528 10.8460651 10.6051450 4.8502594 5.0785244 4.2755658 8.9181912 11.9194196 4.8707198 13.5828853 6.5283291 7.3612192 11.4127180 11.1167764 12.9165774 7.6546654 10.6461581 10.7944467 10.8418603 10.5331518 5.1639173 9.7857173 10.7339482 11.3361443 NA 10.3045275 9.7356924 0.7209788 3.6336288 9.0040628 12.3385568 9.9255457 9.6316173 14.6600716 10.7107238 10.9015053 8.2445365 7.7598935 13.2572217 9.7244924 12.7116103 10.5793441 10.1181143 10.1545599 8.2562497 9.8715976 0.00013863 0.00013863 0.00013863 0.00541390 -0.78522000 0.75299000 -0.00954260 0.00527490 -0.00968060 3.65690000 0.00889200 1.55930000 -0.01092200 0.00027766 -0.01147300 3.65690000 -0.78387000 0.76063000 0.74005000 -0.78808000 0.00000000 0.00138680 0.02146300 0.02146300 0.02146300 0.02244400 0.02244400 0.02244400 0.75775000 -0.75857000 0.00013863 -0.00539920 0.00541390 -0.00761010 0.04698400 -0.00954260 -0.00954260 0.00527490 -0.00968060 -0.00968060 0.02216400 -0.01003100 -0.01133500 -0.01615400 -0.01615400 -0.02111300 0.00110930 0.00027766 0.00027766 -0.01147300 -0.79505000 0.76063000 0.74005000 0.74005000 -0.78808000 0.00000000 0.00138680 -0.80285000 0.02146300 0.02146300 -0.01009400 0.02244400 0.02244400 0.75775000 0.57380000 -0.77048000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.688 -0.777 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.688 -0.777 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 7.7039679 12.4258508 7.3430267 9.7032551 4.3038319 10.4708439 1.5283213 1.8909136 8.6020886 6.3208872 NA 7.7181540 1.0429244 10.1618437 9.7160349 5.1639173 9.6278651 9.8255732 7.7897527 10.4416462 9.3391490 8.0916618 9.7680985 2.0714881 10.9760030 9.4048463 2.4214253 -0.2791087 10.6104785 4.9689018 12.6997743 11.3042924 6.4074751 9.4412187 9.1946803 9.7018282 2.3059413 0.7209788 NA 1.0429244 10.5609656 8.6323664 9.3227452 3.1804025 7.7865251 7.3684331 11.0420570 4.4214118 9.6989699 NA 11.1602860 3.3648245 3.3059413 9.8037822 7.6922884 2.3059413 9.6028532 7.2640062 4.9689018 -0.2791087 13.9305040 -1.2789336 10.0417751 NA 8.6112388 5.8084365 8.1721855 7.5121376 16.432535 5.421415 9.873259 12.419896 9.811087 10.193665 12.995134 12.757320 8.838617 11.421197 12.391520 10.348508 8.128242 7.087296 1.042924 7.531546 11.509693 11.2245518 8.6472706 9.1014355 10.5279268 9.6729876 11.0526557 6.0608234 7.9712728 12.6892813 4.7433426 -0.2791087 9.0485272 7.8092061 9.1793812 10.0900265 9.3693321 9.0224707 12.0723279 5.2445370 10.2173290 10.8563632 8.0697027 9.7280018 11.1033283 8.3171643 NA 8.5140414 5.3167178 4.4214118 10.6051450 5.2287687 10.6494929 8.9181912 7.4254316 13.4124999 9.7924368 9.3942837 12.2556421 11.0049310 10.0000046 0.7209788 TCGA-E2-A15P 61 0 NA 595 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 85.58.0 5 2 2 NA 2 2 3 4 3 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.39057e-07 10.9355368 8.0893535 7.0164974 11.4865648 -1.8693327 11.1952067 -0.8690691 10.3249420 12.4085241 11.9126727 10.1402796 7.4022634 8.8890238 8.6524012 9.1710905 10.0084684 11.2265274 9.0622769 7.3763538 1.8312287 10.7302487 9.0541284 12.9068225 10.2471447 9.6631567 10.5963672 4.6853908 10.6128524 -0.8690691 4.2182620 7.9557597 12.9759477 12.3880125 6.8484777 13.6472087 13.6034599 10.4127308 7.2471443 3.3402489 7.1995791 8.8940131 7.9219635 7.8295052 12.8212899 0.9381729 9.4322970 13.4320826 6.8688929 9.4869665 10.9314985 8.6572999 9.0965850 -0.8690691 14.7673236 8.8595717 2.5902427 7.3881887 0.1307991 5.0011672 10.7950258 9.9337209 10.7181095 10.8469771 9.7701414 9.3816913 2.5231103 12.5814321 10.2389985 7.5549671 8.1914965 -0.2841945 11.8077495 14.4885933 7.6809706 12.0850880 11.5139650 7.6206487 -0.8690691 1.1307991 8.7279222 9.5876686 11.5629511 -0.8690691 4.7157616 7.1887926 9.4185132 10.5147750 5.2600821 4.8312388 4.3007241 9.9373504 11.6723814 1.8312287 13.6461310 6.7601571 8.1265677 11.9196210 10.7274564 13.1481312 7.8085202 10.3402541 10.7787089 11.0224952 11.6599872 5.6464997 8.5830421 12.5446931 11.1576700 -1.8693327 10.2674715 9.1989071 1.5902427 4.2611171 9.5999339 10.7829735 9.6543627 9.8398845 14.8220808 10.4501907 10.3323121 9.8493336 3.0376985 15.4858679 10.6027299 13.0441577 12.2195890 10.7227905 9.9609198 8.9405688 10.3468736 -0.62408000 0.00000000 0.00000000 0.00360760 0.00060040 0.00546690 0.00805670 0.00513590 -0.63415000 0.00708260 0.00708260 0.00708260 0.00388540 -0.63389000 0.00332990 -0.00221680 -0.00221680 -0.63859000 0.00176350 -0.62532000 -0.62131000 0.00000000 -0.01298900 -0.01298900 -0.01298900 -0.02903800 -0.02903800 -0.02903800 -0.00110870 -0.00788630 -0.62408000 -0.01285100 0.00360760 0.00546690 0.00833510 0.00329560 -0.00079353 0.00513590 -0.63415000 -0.63415000 0.00124810 0.00124810 0.00708260 0.00541390 0.00541390 0.00541390 -0.00391000 -0.63389000 -0.63389000 -0.00304750 -0.63821000 -0.63859000 0.00176350 0.00176350 -0.62532000 -0.63958000 0.00000000 -0.64321000 -0.01298900 -0.01298900 0.00958830 -0.64959000 -0.02903800 -0.00110870 0.00569190 -0.65221000 0.000 -0.634 0.000 0.000 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 0.000 -0.634 0.000 0.000 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 8.0644917 12.7093504 7.0674387 9.7501037 4.3787266 10.9010517 0.4527009 -1.8693327 8.1490007 7.5401916 0.4527009 7.8223701 2.3787336 10.3958297 9.5139650 2.1307991 9.0879027 9.7330357 12.8666212 10.9178871 10.4263717 8.6306468 10.3347604 2.6543668 9.8001287 9.3816913 3.9636868 2.3787336 10.4374321 3.3402489 11.7742060 12.3755362 7.8190512 10.2944504 9.0762446 9.0915266 3.7455063 NA 0.4527009 8.1462158 9.4756514 9.4040135 10.0788029 4.4162047 8.2636345 5.5820110 10.5236548 7.0256180 9.8616953 -1.8693327 11.9748199 1.9381729 4.9509816 9.9712758 7.1530017 4.4162047 9.1201954 8.2549218 6.9887812 -0.8690691 13.4818090 -0.8690691 10.1985713 -0.8690691 7.3082207 5.2703533 8.0331757 8.6747992 12.841069 4.938154 9.511803 13.647209 10.227186 10.615372 12.821290 13.219258 9.431153 10.666319 12.800073 9.648962 9.587669 8.298219 -1.869333 7.926840 10.966851 11.3849436 6.9445821 8.6660763 8.8688929 9.0286462 10.7628918 6.1080811 6.1587066 10.2471447 6.3353725 2.3007388 5.4345815 6.7446267 11.1018053 10.7662922 8.1152190 8.4138889 13.2695525 6.4208192 10.7181095 10.0003946 10.9733475 9.7422867 11.0187829 9.0466801 0.4527009 9.0815023 6.5733715 6.7082300 10.5147750 6.7710457 10.7098810 9.9373504 7.6385952 12.9998644 10.2732269 10.1290386 13.0233910 9.4402770 10.4388554 0.9381729 TCGA-E2-A15R 64 0 NA 519 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 85.58.0 3 1 5 NA 2 4 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 7.509076e-07 2.224912e-07 11.06513282 4.61645768 6.84083330 11.62628914 -0.49899405 11.13821195 2.23796135 10.20834240 11.61581012 8.68585853 10.77283538 8.64223910 8.61646063 9.33545445 9.01799649 8.05557203 10.25670547 8.66253522 6.07083795 NA 10.62186918 10.13941923 13.25865111 10.92059239 8.95973162 10.54150138 0.91601797 9.74970152 -1.08405849 0.72334012 6.69738046 12.15181069 13.53861605 5.03496399 12.94629998 13.39687410 8.28997368 6.82890952 2.82291366 9.06576805 8.58401918 4.79866231 10.57110423 13.10151573 3.87021674 7.87747065 14.21790991 1.23793077 9.64658013 11.72277180 9.18748372 9.79445502 NA 11.52247114 9.64351585 3.34228450 9.94150647 -0.49899405 3.72337289 10.09157039 10.02487191 10.81896109 11.78194733 9.36155301 9.42678491 -0.08390558 12.45050608 10.59484103 7.51034564 5.63026567 2.55988333 10.10275404 14.47465078 8.63647889 12.84865081 11.60197409 7.16394850 -1.08405849 7.25364235 7.23794893 8.82741289 9.95185090 NA 6.45517924 6.87312293 10.97924733 10.68854162 5.07589198 2.77399633 3.08595146 9.59241873 11.41586670 7.35689032 13.09507459 6.50098365 8.29323114 11.37660469 12.50291922 13.07648315 8.53165048 10.21351035 12.14596614 11.60923983 10.84064773 5.51593317 8.04143411 11.28915781 12.06560917 -1.08405849 9.93942862 9.78638546 2.00349430 4.51830852 9.95733773 9.95185090 9.34960634 9.65199990 15.37713250 10.65896174 11.05173011 7.78638530 2.50098047 16.29452735 9.44447492 10.83655979 10.22862019 10.47132893 8.60252146 8.35896410 10.67885750 0.82686000 0.82686000 -0.85837000 0.00000000 0.00000000 0.00041593 -0.00457070 0.00736090 -0.85908000 3.65690000 3.63530000 0.00346870 -0.85750000 0.01300500 1.53450000 3.65690000 -0.85821000 -0.00172450 -0.00172450 -0.85281000 -0.00479580 0.02104300 0.00402430 0.00402430 0.00402430 -0.02675800 -0.02675800 -0.00595220 0.73511000 -0.84387000 0.82686000 -0.00968060 0.00000000 0.00041593 0.00041593 -0.00457070 -0.00457070 0.00736090 -0.85908000 -0.87393000 0.38485000 0.80694000 -0.87408000 0.00944910 0.00944910 0.00944910 0.00944910 0.01300500 -0.85136000 1.50890000 -0.85821000 -0.00172450 -0.00172450 0.01684500 -0.85281000 0.01447000 0.01014600 -0.85588000 0.00402430 0.00402430 1.66750000 -0.02675800 -0.00595220 -0.00373950 -0.02257800 0.03228100 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 7.91178804 11.84453917 8.05301193 10.35429281 3.98210830 10.71124873 1.23793077 -2.08375268 8.69901887 9.48397696 -2.08375268 6.86672256 1.08596845 10.50941191 9.35637097 -0.49899405 5.98748232 9.07020603 7.14002296 10.28234296 9.34401444 8.02846031 9.98748317 2.37545654 9.19679169 9.42678491 5.64393986 -2.08375268 10.97011632 3.27357557 11.60787335 10.73340425 7.78175378 8.97062505 6.48587599 9.13276678 7.65242268 -0.08390558 0.23793077 7.09094656 9.99983247 7.73619964 10.37109107 2.67090830 9.82076071 7.56167898 10.52750672 9.12730078 9.70188187 -2.08375268 8.91742907 4.30833903 3.72337289 10.43409859 5.19929543 0.91601797 8.58046812 7.22208292 4.55987721 -1.08405849 12.99367105 -0.08390558 10.10800531 NA 5.98211058 4.14483768 8.03496179 8.35064885 15.078534 6.407874 9.731004 12.946300 9.126710 9.623380 13.101516 13.573590 8.472527 11.182807 12.569762 11.345820 8.827413 6.095931 -0.498994 6.887564 11.114619 11.329913 8.314764 9.445939 10.452996 9.920241 11.093495 5.219800 8.498163 10.920592 6.070838 2.308332 4.588445 7.751250 10.198820 9.885047 10.349309 9.684619 11.686581 2.308332 10.818961 10.821408 11.677676 8.805525 10.898123 9.075261 4.574235 8.458888 7.142120 3.237946 10.688542 6.447402 11.136399 9.592419 7.752150 13.650068 9.194470 9.159195 12.069335 9.203156 10.051089 0.501006 TCGA-E2-A15S 34 0 NA 428 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 85.58.0 3 1 1 NA 2 4 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 8.621532e-07 2.781139e-07 11.7839738 5.5238787 7.2867583 12.0194329 -0.7981153 10.3305883 3.2463473 9.6092172 11.3622937 8.8385740 10.8433239 6.2075747 10.7164170 9.9370823 7.8989169 8.1706161 10.1426302 9.7235499 6.4498766 1.6613848 11.9544347 9.5905049 15.0092918 11.8696155 9.4675646 10.5048740 2.8458112 10.3179684 4.9568373 2.1088255 6.1385872 11.1833384 14.1173154 7.7333306 12.9149600 13.9940789 8.7972069 6.5726366 2.9568373 8.4815601 8.3273631 5.3516955 6.8385737 13.8851634 2.3718655 7.9865844 13.8200769 1.9023824 9.2429514 11.5067286 9.5780749 8.9434165 -1.7978644 12.4246448 6.8637279 3.0599263 9.1451970 0.2020102 3.5595040 9.9547483 10.4622810 9.1451970 8.6006931 9.2551967 9.6124008 0.5238630 11.3317155 10.3231592 6.3052373 5.3818578 3.1088422 10.9738516 14.1175021 9.7632947 11.0916436 11.6271654 6.5102879 1.3718934 9.6822348 8.2159697 8.8331266 9.5250043 NA 4.4873513 7.3440562 11.4082008 10.8541222 8.6049616 3.4113991 3.9023920 9.3862050 12.0897413 8.5627965 13.4490611 6.9898520 7.9947398 9.9746764 10.8745958 12.7969738 8.8690611 10.9820791 11.0901219 10.8541222 10.6234884 5.0845916 9.1215576 12.8029658 13.0872645 0.2020102 10.5693642 9.1877915 0.2020102 4.9707938 10.0360255 10.0253168 9.7027914 9.4850379 15.8067199 11.6696824 10.0769309 9.9800266 2.5238881 15.5311064 8.0937334 10.1459293 10.0193329 10.8189577 9.6108099 7.8221693 10.4087868 -0.78100000 0.02918400 0.01306300 0.42587000 0.01209700 0.01321300 0.84692000 0.81220000 0.01363200 1.29460000 0.37924000 1.94990000 0.83616000 0.40632000 0.37611000 0.04032600 0.04032600 0.39579000 0.39579000 -0.79945000 0.03538300 -0.00304750 -0.74690000 0.05281000 0.85997000 -0.72676000 -0.34198000 0.40811000 1.34340000 -0.77065000 -0.78100000 -0.76522000 -0.00013862 0.01321300 -0.38829000 -0.01312700 -0.01821600 0.81220000 0.01363200 -0.79058000 -0.37426000 -0.05980700 -0.80712000 -0.78875000 -0.78875000 0.05965100 -0.52532000 0.40632000 -0.80078000 0.01140000 -0.79886000 0.39579000 0.39579000 0.39579000 -0.59341000 0.02490400 -0.00304750 -0.78606000 -0.78235000 0.05281000 0.02525000 -0.72676000 -0.32785000 -1.29290000 -0.05401600 0.06537000 -0.354 0.053 0.000 0.000 0.396 0.396 -0.593 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.727 -0.342 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 -0.354 0.053 0.000 0.000 0.396 0.396 -0.593 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.727 -0.342 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 6.7603700 10.5323062 1.2019475 10.1852994 2.3262785 12.8434933 0.2020102 -1.7978644 8.9534934 7.5261299 0.2020102 6.7412634 2.0093113 10.4731206 9.1050783 6.4919685 5.7097428 9.3542344 7.7137020 10.2643329 10.4366742 8.9676499 9.9041222 -1.7978644 8.1517761 9.6124008 2.3718655 1.2019475 10.8230856 2.2019475 11.5519218 11.1715159 6.2463435 9.3072033 6.8565861 9.2720703 6.4114025 4.2463473 -0.2130691 6.6776830 7.7411083 8.9890359 11.4028481 4.4687332 8.9962678 7.9568367 9.6715913 6.3818578 11.2555360 -1.7978644 8.1619517 2.7255012 5.0845916 9.8056360 3.7426638 1.2019475 7.3260708 7.6531604 6.3260717 NA 14.0249684 0.7869309 10.3453327 NA 7.7294263 6.1906346 7.9996111 7.9684785 14.694694 6.636578 8.384344 12.914960 9.641780 10.101306 13.885163 12.688659 9.700300 11.162313 12.140059 11.199305 8.833127 7.860161 3.902392 8.491969 12.095915 11.471661 9.501907 8.069228 10.698554 9.934541 10.243383 3.108842 9.168455 11.869615 6.246343 -1.797864 8.799071 8.655477 9.858821 10.726981 8.534993 8.960173 11.875038 2.009311 9.145197 10.199835 11.186190 8.978382 11.186190 8.953493 4.970136 8.279673 5.741108 3.411399 10.854122 4.179232 11.085547 9.386205 6.705775 12.888559 9.523878 9.452840 11.733940 9.367485 9.733818 2.371865 TCGA-E2-A15T 65 0 NA 456 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 85.58.0 3 1 1 NA 2 4 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 2.781139e-07 10.83302502 5.68501224 8.03482042 11.47911236 0.64938553 11.07019200 -0.08758006 10.27034252 12.63920982 8.98388629 10.36329156 7.84316104 9.22227930 8.66842410 8.86662026 9.07900549 11.15321532 10.50488104 5.57538797 3.53691080 9.97041568 8.57894399 12.98584037 12.35458998 8.97941005 9.32110755 2.78688905 10.73418469 -1.67254257 -0.08758006 7.02442939 9.80774678 13.55995739 5.72833959 13.32873775 12.93114581 7.73260297 5.24632447 1.78688905 6.28165745 8.52713369 8.76625326 4.78689428 14.10088407 4.18544636 8.39892407 14.56345701 5.51728514 8.64905135 11.52744050 8.36775109 8.40694647 NA 12.80468032 6.27582839 NA 7.11536416 NA 4.21010828 10.28093046 10.01702273 9.38477641 10.23322456 10.74900045 9.21010462 2.78688905 12.07439565 10.64232793 6.77867249 7.51233673 13.24366755 11.10224856 13.94599040 9.74784287 11.27710586 12.55522785 5.93479246 1.13481236 2.57538495 8.48227958 9.54420735 10.00650169 -0.67254257 4.63124400 7.07900576 10.13763147 10.54451040 4.77040622 3.64938553 4.30474466 10.81605485 11.99079723 2.41492028 13.75624694 6.68940540 7.97851313 11.40477798 10.92760672 13.29931936 8.11862448 9.49676012 11.36929176 11.05250821 11.64798005 5.81127835 8.24632495 12.42820598 11.51078671 -1.67254257 10.05750700 9.28165792 1.64938553 2.72115389 9.16351181 9.69323708 10.53172698 9.37867049 15.23186093 11.00297756 10.73340070 8.19474011 2.02789715 16.45452887 10.04170706 11.66313101 9.83178400 10.59950805 9.44185464 8.69814901 11.08270798 -0.0059522 0.8532500 -0.0548580 -0.0089906 -0.0089906 -0.0056757 0.0030522 0.0140510 -0.0204120 1.7417000 0.0351000 0.8001400 0.0262330 0.0262330 0.0155870 1.7184000 -0.8168800 0.0054139 0.0054139 -0.0067813 0.0053731 0.0263730 -0.7997000 0.8172700 0.8172700 0.0373590 0.0373590 0.0373590 0.0393370 0.0454240 -0.0059522 -0.0132190 -0.0089906 -0.0056757 0.8145400 -0.0048214 -0.0099398 0.0140510 -0.0204120 0.0183830 0.0000000 0.0000000 0.8603700 0.0122370 0.0122370 0.0122370 0.0589370 0.0262330 0.0262330 0.0155870 -0.8339700 0.0054139 0.0054139 0.0054139 -0.0067813 0.0109820 0.0217840 -0.8241700 -0.7997000 0.8172700 0.0140510 0.0373590 0.0373590 0.0393370 0.0244080 -0.8354400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 7.55627996 11.39992910 8.27436790 9.34496583 2.39182270 11.14444514 0.91241994 -1.67254257 8.26409960 6.50238789 -1.67254257 8.48859333 1.91241994 10.54269112 9.19628417 3.45674045 7.44640264 9.42021858 11.62738496 9.96045669 9.60452803 8.29324586 10.74663171 0.91241994 9.36569472 9.21010462 2.23434803 -1.67254257 10.92714194 2.02789715 11.42005348 12.12684432 7.24334062 10.55958263 5.75372754 9.01308646 1.49738244 1.91241994 -0.08758006 5.34982878 9.46317081 8.61978310 9.50425808 3.18543843 9.82722265 6.21010438 9.72620521 4.70250241 10.46509312 NA 10.55327141 0.91241994 4.08234494 9.67998495 6.93019800 4.45674702 9.53995789 6.87049295 7.38545347 -0.08758006 13.31694471 -0.67254257 10.06217110 NA 8.31756547 4.68501505 7.88396776 8.79710347 15.8163899 5.7024996 8.7672923 13.3287377 9.9208526 9.3773101 14.1008841 13.4721994 8.6174803 11.3935507 13.5372575 11.0543183 9.5442074 8.6105498 0.6493855 8.4810135 12.1187262 11.3059933 6.5610817 9.1444451 9.5562801 10.1010129 10.7511001 4.5369170 4.3718585 12.3545900 3.7868891 0.9124199 8.8062312 6.9559800 9.2743677 9.5179036 9.4873328 8.9114846 12.0853723 4.2343557 9.3847764 10.3425281 12.0899474 9.1380332 10.8791698 9.2990051 -0.6725426 8.0831001 6.2795623 5.5369139 10.5445104 5.1476405 10.8082517 10.8160548 7.5320325 13.2958133 10.2585684 9.2925243 13.2016264 10.2343521 9.8753201 0.3274574 TCGA-E2-A1AZ 63 0 1841 2329 breast stage iib t2 n1a m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 96.50.0 4 4 4 1 1 3 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.029022e-06 3.615481e-07 11.2435347 6.4922137 6.5160609 10.4253143 NA 9.9862027 1.5853472 10.2814213 11.8544499 10.4518295 9.5740078 7.6621385 9.2559796 9.1244819 8.7898945 8.6541015 8.4526020 10.9598193 9.1815131 5.7350699 11.2705100 9.2978503 12.5552493 10.7892829 10.5293032 10.5909478 6.8799434 10.0241151 0.5853472 0.5853472 9.3012851 12.1707553 12.5217771 7.2291793 12.1157295 10.8063061 7.8891042 8.3335159 5.4679674 7.9647019 9.4339461 7.9819280 7.7800804 5.4182136 1.1703097 10.2656828 9.2822908 7.1010228 9.3047120 10.3267902 6.8521100 4.6727874 0.5853472 13.8851208 8.8660941 3.6727874 8.7376080 10.4526019 4.8332494 9.8947996 12.1660529 10.0157758 10.7905055 10.1636960 9.3683214 1.5853472 12.0385939 9.8567862 4.2857647 7.3200324 2.9072560 7.7947765 14.0823018 9.0537437 11.4308133 11.5690294 9.6146105 2.1702776 -0.4146528 9.0447547 9.4725438 11.5086507 NA 4.3926815 7.4922137 11.6201222 11.7987313 5.8891036 7.7451943 5.5395187 10.3174906 12.2062303 3.3926746 12.6938477 3.1702936 7.5909478 12.0010650 11.9337748 12.4788144 7.0691393 10.1945019 11.4506698 10.9917409 11.6754356 6.2000335 7.9690273 11.6429766 7.8189432 -0.4146528 10.4213735 10.2639234 1.5853472 3.7584524 9.4370723 11.4782454 10.6180577 9.9128759 14.4842080 10.7689586 10.4672019 8.0931180 2.7552508 11.3510237 9.1627521 12.5093934 13.2787013 10.4331635 9.5597379 9.0691390 10.6108989 1.1578000 1.3422000 0.1213800 0.1757300 -0.1983700 -0.0018014 0.2526100 -0.1848400 -0.1960000 0.4992600 0.4992600 1.2937000 0.4849200 0.5285100 -0.2234600 0.1798000 0.1798000 3.1124000 -0.2048600 -0.2483300 -0.1947500 -0.5961800 -0.1840800 -0.1840800 -0.1885200 -0.1474700 1.9239000 0.1949700 0.1841000 0.2432600 -0.1677500 -0.6301700 -0.6002200 -0.1580900 0.0000000 -0.2118100 -0.6080600 -0.1848400 -0.2019500 -0.2443600 -0.2118100 0.3334800 -0.3492700 0.8309600 0.8309600 -0.2173800 -0.1640800 0.5285100 0.6016000 -0.5869600 0.1710600 0.7775300 -0.2062200 -0.2368000 -0.2077200 -0.1980000 -0.6494300 0.2056400 -0.1840800 -0.1840800 0.1450700 -0.5493500 0.1949700 0.1718100 0.1665500 -0.5998300 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.604 -0.604 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.604 -0.604 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 9.2788102 13.2327816 6.0771768 9.2110322 4.7552508 11.4729246 4.0447526 4.0447526 9.2363749 8.8117353 5.4182136 8.1211817 6.8982059 10.8741893 9.0771762 2.9072560 9.9690276 10.2064593 8.4464101 8.9004729 8.9488884 8.2146800 12.3954932 1.8956516 7.1399125 9.3683214 4.4433016 -0.4146528 10.4347283 2.5853231 13.3220422 13.2165003 8.6378913 9.5923505 11.3280537 9.5351500 5.2577499 2.9072560 1.9072368 1.1703097 8.2255680 9.8320639 6.7652324 4.9428757 7.2413902 5.9072512 10.0881550 6.2146805 9.4166306 1.5853472 10.4831686 3.3926746 6.0447547 10.5131605 5.7314086 6.6621385 8.7627428 8.6964588 7.4740661 5.6076913 13.3797391 -0.4146528 10.3089841 NA 10.8207392 4.1702856 8.8497657 7.2146795 10.073816 10.466437 8.654101 12.115730 10.407097 10.588841 5.418214 8.579676 9.433946 13.139432 13.679318 11.874766 9.472544 7.667472 4.044753 7.898206 10.580384 10.8845312 4.8332494 9.3166422 8.0115879 9.8225332 9.9032671 7.8567865 5.9603634 10.7892829 10.7984274 0.5853472 9.0508896 9.3621674 12.5119898 10.4710196 8.4118715 7.6187459 10.7113824 8.0731631 10.0157758 10.0569984 11.6121924 10.0911348 10.7583756 9.6846710 3.3926746 9.2887424 7.4982126 8.3132436 11.7987313 6.7248740 10.6807203 10.3174906 7.7402935 14.0249580 10.6194344 10.8597014 12.3288954 10.1128002 9.6378913 3.1702936 TCGA-E2-A1B0 50 0 NA 1631 breast stage iiia t2 n2 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 96.50.0 6 3 5 1 3 2 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.674735e-07 3.337367e-07 12.4433164 4.2712240 5.8881977 10.4941133 0.5707544 10.4816158 0.5707544 11.2085427 11.6242026 7.9195141 9.7716844 8.1679073 6.8584983 9.9145267 7.0525854 9.3500947 10.3869694 11.2417739 8.6648636 3.0302125 9.8674153 11.0427150 14.1234249 9.8679886 10.8047050 10.6958763 5.4716525 11.0288066 -2.4289543 2.5707786 9.9275128 12.3559828 11.7579832 7.5162295 16.8271511 12.2629653 9.2123860 5.0137302 2.3781509 5.9195141 8.5580499 6.0785799 7.5945403 12.1019844 NA 11.4747617 8.4496031 3.5707908 9.4170597 11.4042689 9.2828829 5.8699948 -2.4289543 12.9098995 8.8457463 1.6582343 8.8369867 -1.4293428 5.6845270 10.2553153 10.4463432 10.1987755 10.1634763 10.1857256 10.0985071 -1.4293428 11.7359283 9.8032067 4.9371089 6.7923726 10.4612401 9.2991315 15.5749514 8.7668529 12.0616993 12.6294963 8.2564106 3.3781370 -1.4293428 8.0343104 9.1836542 12.2560821 -0.4291485 7.0864855 7.6301302 9.6236933 10.7843457 5.7899535 6.7256035 5.1176784 11.0210949 11.7060141 -0.1073370 13.7124738 5.1021668 7.6014529 12.2168381 13.6587044 12.8880924 6.2502662 11.1928376 11.0857464 10.1978773 11.3922608 5.7306563 7.2055968 11.9337569 9.2087691 0.7407117 10.0343101 8.7612278 0.1557492 2.6637545 10.0248280 11.5580498 10.5446624 9.2074105 15.1025403 10.2790075 10.4801163 7.3635759 2.9283324 14.8907401 9.8454551 14.2553289 12.0091878 10.4690093 8.9161909 8.8521362 10.1637612 0.0794590 0.8443500 1.1502000 1.2323000 0.0093098 -0.1357400 1.6439000 0.6011100 0.2142200 1.7748000 3.6569000 3.6569000 -0.0720070 -0.0720070 -0.0102320 0.5988800 0.5988800 -0.0732090 -0.0732090 -0.0316190 -0.2587800 -0.0989480 -0.1277200 3.6569000 0.9295900 -0.0627640 -0.0627640 -0.0627640 0.3149800 0.0570830 0.0794590 0.0610790 -0.0452280 -0.1522100 -0.1377600 -0.2509200 -0.2354500 0.6011100 0.2142200 -0.1231700 0.1194200 -0.1332900 -0.1515700 0.0000000 0.0000000 0.0000000 0.0000000 -0.0720070 -0.0720070 -0.0579130 0.6102900 -0.0732090 -0.0732090 -0.0732090 -0.0008316 0.0748400 -0.0498300 0.2805300 -0.1201700 -0.2477600 -0.0843950 -0.0062286 -0.0627640 0.3149800 0.6384700 0.2899200 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 8.5778129 13.3470132 6.3716861 8.8556098 3.5249789 10.8828178 1.7407117 6.7506949 8.7661578 9.0611352 NA 8.8531271 9.4948560 10.7649270 8.9022626 0.5707544 8.7826739 10.2500460 9.8219723 10.0225121 9.3611871 7.2378973 11.6635429 1.8187279 9.5165953 10.0985071 1.5708029 NA 9.4197999 1.8187279 13.0937657 12.6946647 7.9490808 9.9373812 8.2440950 9.1089747 2.6151809 2.4776773 -0.4291485 1.8927019 8.4678749 7.8079956 9.3426878 3.6368798 9.0787339 7.2987060 10.5459172 7.3989224 9.9520583 -0.8442508 12.3738069 3.6582458 3.6793112 9.9774000 6.6278301 6.7077774 9.2051430 7.9050590 7.2055968 3.5015283 13.3771592 0.8927407 10.7109764 0.5707544 10.5079757 4.2987096 8.6766944 8.2651438 11.233994 7.492626 8.860228 16.827151 10.047051 12.133267 12.101984 10.338350 9.750695 10.637043 13.184201 11.440765 9.183654 8.674074 2.963104 8.345573 13.249688 10.871567 6.755661 9.472407 8.348863 9.364389 9.380405 6.090422 6.308878 9.867989 5.615181 5.725605 8.915082 8.791920 13.455719 10.265796 9.358688 7.954490 10.328176 6.593154 10.198776 9.891022 11.275230 10.516961 10.767849 9.684528 2.658257 9.520430 9.801413 7.514765 10.784346 7.467118 10.281226 11.021095 7.549496 13.845091 10.441728 10.049555 12.332908 10.548245 9.129207 3.125370 TCGA-E2-A1B1 45 0 NA 1613 breast stage iib t2 n1 m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 96.50.0 2 2 2 5 3 2 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.112456e-07 11.64586631 8.95557668 7.39186222 10.34873844 2.96106763 11.01957405 0.55895330 10.79173546 11.79797366 8.91903522 9.82140234 8.22735024 8.60882033 9.27370796 6.95128938 9.36678686 10.23063930 10.72853900 8.84437404 5.84964905 10.21181689 9.18259224 14.50186598 11.04465750 10.05196952 11.09202345 6.39907537 10.58391363 -0.24845059 2.65850856 10.35477963 13.76489602 12.49497878 8.59475306 14.62820586 12.35251714 9.28737833 6.56539763 3.94144440 7.04623784 9.12774238 8.85621572 8.60024001 12.53354013 2.21104335 10.58608804 12.89456163 4.98043666 8.75232110 10.63292215 8.16524469 6.56860068 -1.24845059 14.07507553 12.13660841 2.07354606 7.62506076 0.33662617 4.10916830 10.47698319 11.02103590 9.92591844 11.50931946 10.43439210 9.34267185 1.45206823 11.95190257 9.61812319 5.43109807 8.02191218 10.12339358 10.52743302 14.36039157 8.35302549 11.69961908 12.01260998 9.37229505 0.92151250 0.07354606 8.75232110 9.91620970 12.16200206 0.55895330 4.67047780 6.81770639 10.29343958 11.63931357 6.82039471 7.77120751 5.36632571 10.59651889 11.97990959 2.07354606 14.40706384 5.03701755 8.19456038 12.62650229 12.33258210 13.29941525 6.69413080 10.02162019 11.44030438 11.13245815 11.69980168 5.34407571 7.79327621 12.05261295 11.27774937 4.64643343 9.92747828 9.42669184 0.07354606 3.50676695 9.26139189 10.37915090 10.74118887 9.09313573 14.95473552 9.74384715 10.31528997 8.01957405 2.14394845 14.51137514 10.46478863 13.77335607 13.03119128 9.57378937 9.12448194 9.15142886 9.37032821 -0.0011087 -0.0011087 0.0026357 0.0000000 0.0000000 -0.0020524 0.0000000 -0.0317680 -0.0317680 0.0210430 0.0210430 0.0210430 0.0189430 0.0189430 -0.0015114 -0.0015114 0.0134920 -0.0031859 -0.0031859 0.0800330 -0.0040162 0.0066653 -0.1741100 2.0119000 1.1462000 0.9024600 -0.0227440 -0.0227440 0.0575110 -0.0011087 -0.0011087 -0.0061669 0.0000000 -0.0020524 0.0037465 0.0000000 0.0000000 -0.0317680 -0.0317680 -0.0317680 -0.0019399 -0.0032142 0.0210430 -0.0052610 -0.0052610 -0.0052610 -0.0052610 0.0189430 0.0189430 -0.0015114 0.0134920 -0.0031859 -0.0031859 -0.0135990 0.0463560 -0.0040162 0.0066653 0.0107030 -0.1741100 -0.2355700 0.0174110 -0.2031100 -0.0227440 0.0575110 -0.0094046 -0.2625200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.60492660 13.10703689 8.35431595 9.55049381 5.06468026 10.55615137 2.21104335 2.55897778 7.98763125 9.34454115 1.07354606 8.81842592 3.75161368 10.40826530 10.70126132 2.14394845 10.94236759 10.28372932 9.52681572 8.50232384 9.52071924 8.09035329 10.75548616 2.79601624 9.39412009 9.34267185 5.03701755 NA 11.30848221 4.10916830 12.69527645 12.01737850 8.92841356 10.54867050 11.42426331 8.59396734 5.06449920 1.55895330 1.45206823 3.63425637 8.48547956 8.30908067 10.46757896 6.73461073 7.08778847 4.81770511 9.93835020 7.16524469 10.15622633 0.07354606 11.21526907 3.60960132 4.74030157 9.66898530 4.80113796 6.19455989 9.28932061 9.16100789 8.68235418 0.55895330 13.72683801 0.55895330 10.65700397 -1.24845059 9.33798777 6.00428340 8.52722715 8.69486453 13.0709769 6.6250615 8.8337661 14.6282059 11.3291638 10.1880683 12.5335401 11.2706388 8.9834383 11.3601917 13.5623392 11.1235297 9.9162097 8.5670004 -0.2484506 9.2354327 11.0997919 11.057679 5.366326 9.178406 8.230387 8.471006 10.232745 6.990022 6.992408 11.044657 5.402668 4.126659 5.143936 7.268479 12.635501 10.618896 8.711619 8.455520 11.660572 7.576576 9.925918 10.676801 11.284095 9.674944 10.585298 9.837421 NA 9.292317 8.248241 7.001916 11.639314 8.653992 10.616770 10.596519 7.137479 13.984394 10.560380 10.640931 13.335963 9.587273 9.730327 3.558978 TCGA-E2-A1B4 74 1 1004 911 breast stage iiia t1c n2a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 96.50.0 5 5 2 2 2 1 1 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 5.562279e-08 10.40277440 3.25049171 7.67115181 11.64149441 NA 10.45913034 NA 8.63227294 10.93348412 11.21675465 9.72261630 8.16138184 8.54715096 8.47823935 8.56236417 9.03839201 10.13482968 9.17001517 6.61584000 NA 11.49247272 9.96778521 12.97949654 10.88972974 9.39401460 10.20952550 4.05784880 10.20533215 -0.91947877 0.08052123 5.95708114 10.27716672 12.52162834 5.76004526 13.41270604 13.76023708 9.87863125 7.33559312 2.47287764 6.06924889 8.77666266 9.78576500 7.82203157 13.46737013 3.08057240 11.10154450 14.62175196 6.49841683 10.56282797 10.45097954 4.65041993 4.55630065 -1.91920592 14.18402061 7.47930818 0.40250390 8.97538228 NA 2.32849183 8.72080960 9.53743236 10.82245285 11.26559483 9.49419257 10.01314845 3.83544916 10.68395913 9.83670384 7.35436047 7.19690895 10.17596153 11.29382073 14.10518484 6.57462077 11.25174134 10.62528757 8.82371593 0.40250390 6.83210898 7.73161637 8.11398746 11.68187110 -1.91920592 5.36596543 6.93854575 9.50682942 10.82623886 4.38434688 4.42041503 2.88791514 9.76487491 12.06987036 2.16803223 13.09231596 7.42041419 7.86028374 11.85802538 12.92620162 12.77056254 8.57542012 10.29458009 10.65775736 10.30787964 10.86233407 3.29001147 9.42208348 10.98651561 11.35727059 NA 10.38463062 8.30094279 NA 3.69821848 9.78360300 10.73989155 9.89354408 8.73071875 14.91837726 9.98670360 8.77753215 10.00871279 2.08055534 16.51502177 9.90989083 12.07792051 12.52292495 9.62069252 10.14058491 7.87984604 9.96103578 5.4139e-03 4.9739e-03 -3.7598e-03 -6.9344e-04 -8.0549e-03 -1.0646e-02 8.2686e-01 2.2193e-03 -8.7982e-03 -3.7395e-03 -3.7395e-03 -3.7395e-03 -2.0173e-03 6.3871e-03 4.3817e-06 4.3817e-06 4.3817e-06 8.7528e-03 1.0286e-03 -8.8526e-03 1.2695e-03 1.0842e-02 1.8103e-02 1.8103e-02 1.8103e-02 2.3286e-02 2.3286e-02 1.4769e-02 1.4470e-02 5.4139e-03 5.4139e-03 -4.4312e-03 -6.9344e-04 -1.0646e-02 -1.0646e-02 -4.8461e-03 -4.8461e-03 2.2193e-03 -8.7982e-03 -8.7982e-03 0.0000e+00 0.0000e+00 -3.7395e-03 -7.8863e-03 7.6392e-03 7.6392e-03 7.6392e-03 6.3871e-03 6.3871e-03 4.3817e-06 8.6135e-03 8.7528e-03 1.0286e-03 1.0286e-03 -8.8526e-03 1.2695e-03 1.0842e-02 -7.9267e-01 1.8103e-02 1.8103e-02 1.9418e-03 2.3286e-02 1.8484e-02 1.4470e-02 6.2481e-03 2.7076e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.68604383 12.51786150 3.91345433 10.06177512 NA 11.44045135 -0.33442531 0.08052123 8.91898068 7.75828452 0.40250390 5.29001885 -0.33442531 10.11157650 9.44305646 0.88791514 6.73161637 8.43150387 11.32224985 11.21739553 9.63045990 6.97840959 10.15403669 2.08055534 8.85946304 10.01314845 4.08056387 0.66548373 10.58314775 2.40250390 13.66631935 12.35457866 7.01130218 10.63970265 7.49630655 9.76443640 4.20985103 -1.91920592 NA 1.25047655 9.70444613 11.02032738 9.89314299 0.40250390 8.83193296 6.55629759 10.52065512 4.69527563 9.49841703 NA 10.51857664 1.66552921 4.25049171 10.00795372 6.84138445 0.08052123 8.65515824 5.55629759 5.28023627 -0.91947877 14.43663821 NA 10.14058491 -1.91920592 8.64280697 6.13041406 7.72261630 8.11811154 12.8406446 2.9874482 9.1297325 13.4127060 10.6289049 10.7414518 13.4673701 12.4236114 8.9959661 9.7714357 12.5774807 9.5749202 8.1139875 8.9524699 0.6654837 7.9904574 10.8871142 10.620208 6.774052 8.754757 9.179255 6.544090 10.257872 5.619724 6.544090 10.889730 7.212421 3.572417 7.189089 4.369292 9.297917 10.119826 6.523509 9.324928 9.310585 3.604131 10.822453 10.634194 11.222193 8.658937 10.434538 7.590339 NA 9.693691 6.881464 3.438120 10.826239 5.957081 11.204686 9.764875 6.468582 14.308970 10.473687 11.116910 12.631972 10.966070 9.711742 1.987466 TCGA-E2-A1B5 46 0 NA 984 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 96.50.0 4 4 2 5 3 2 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 5.562279e-08 10.7086490 7.6139935 7.3300636 10.8541248 1.5789870 10.6886421 1.0935602 9.4910319 11.2351674 10.6198748 8.8119327 8.1225821 7.9440707 9.4858885 6.4995637 9.6466244 8.6740181 10.2463630 8.7659965 5.4581425 9.9707018 9.5765807 10.0873587 11.1695850 10.3729496 10.6280685 9.1081496 9.3854325 1.5789870 NA 9.7112223 11.6325360 12.8991538 8.1423302 10.6385356 12.4598934 10.0118380 4.6542866 NA 6.2554592 8.5315312 9.6218299 6.4009989 12.1300195 NA 12.3263518 12.0473311 3.7716426 9.9713153 9.6139935 9.3936948 5.8801663 NA 14.4380080 12.5498229 -0.2283679 7.8617557 NA 4.4720848 9.2544509 10.0040640 9.2654985 10.5381720 9.4493627 10.0171958 3.5265321 10.5977943 9.5046583 4.1291923 7.7374272 -0.2283679 10.0442728 14.1001427 7.9045028 10.4910318 10.1889682 9.6664609 2.0935602 NA 8.1137177 8.4100790 11.2915250 NA 1.0935602 7.1810340 10.9210726 11.1382385 5.1979086 8.4563918 4.6542866 10.1952842 12.1116322 1.9415571 13.8672049 6.1114925 7.9289903 11.5848230 10.0896209 12.5796016 6.2794379 9.8036888 10.8163787 10.3589518 10.5464301 3.5789991 8.6979392 11.6039397 8.4944504 -1.2283679 10.4360903 8.8457845 NA 3.4720848 10.1931820 10.9198018 10.1319414 8.8390775 15.3819903 10.2709907 10.2669985 8.5950101 2.4720718 14.0948034 7.4298544 12.7643159 12.6457599 9.2443339 9.6132075 8.1958092 9.8630453 0.03115500 0.03115500 0.19984000 -0.03408600 -0.03408600 -0.00193990 0.47255000 -0.00360110 -0.00360110 -0.16039000 -0.16039000 0.16355000 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00664320 -0.02821800 0.45428000 -0.01326400 -0.00374730 0.00166420 -0.12304000 -0.12304000 1.08510000 0.00263570 0.00263570 0.00263570 0.02651400 0.03115500 0.03115500 -0.00027724 -0.03408600 -0.00193990 0.08608800 0.30409000 0.30409000 -0.00360110 -0.00360110 -0.00360110 0.10687000 -0.00526100 -0.17820000 0.09405600 0.09405600 0.09405600 0.09405600 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.02821800 -0.17132000 0.24062000 -0.01326400 0.00624810 0.00166420 -0.17348000 -0.12304000 -0.12304000 0.00041593 0.00263570 0.00263570 0.02651400 0.02904400 -0.10802000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 11.5761774 10.9759085 4.8377314 9.0207564 8.0685590 9.7786704 6.3185374 -0.2283679 8.9009260 8.4755466 -1.2283679 7.8133021 5.0195685 10.3537850 9.2804281 -1.2283679 10.6800357 9.0278518 8.4616411 10.2584781 9.5738039 7.2310743 11.5626024 2.6444793 7.9239276 10.0171958 3.8591049 NA 12.1103794 4.4995653 13.8962491 12.8096189 8.7546367 10.3252724 9.8269255 9.3395991 1.9415571 2.2310637 0.7716321 1.0935602 8.4369788 10.0148171 9.6132075 6.4858889 4.4381132 5.6420084 10.1591219 5.4298536 9.0454386 0.3565946 10.6706223 2.5789870 6.9365496 9.4786916 6.9248909 8.0822560 10.8732905 8.7981665 10.6638063 NA 14.7147073 1.9415571 10.3161246 NA 8.9749910 6.5265305 8.1181567 8.6218299 11.595205 5.794010 9.508890 10.638536 10.987479 10.930568 12.130020 11.981858 9.261491 10.683784 13.568392 10.163960 8.410079 9.337697 -1.228368 9.384512 11.119541 10.606509 5.093573 9.284383 8.886687 6.629625 10.061599 8.966400 8.601366 11.169585 6.519836 NA 4.654287 6.314521 10.288820 11.489534 7.746057 9.683784 10.378973 9.131393 9.265499 11.217692 9.913112 9.588627 10.554232 7.620266 NA 9.498083 8.918313 9.465130 11.138238 5.295205 11.330559 10.195284 6.971316 14.939100 10.839413 10.925512 11.925828 10.258981 9.461641 2.578987 TCGA-E2-A1B6 44 0 NA 867 breast stage iia t2 n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 96.50.0 8 2 2 5 3 3 2 5 1 6 2 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.224912e-07 2.781139e-08 11.6847736 4.9856052 6.6204926 10.9979339 -1.1642376 10.5034124 -2.1642376 8.5629270 10.8165325 10.6094087 9.3510644 8.8052438 7.4339100 9.7104545 8.7871422 9.6347341 8.2526550 10.2919550 9.8287956 6.3236979 11.0309219 10.6272238 11.1252999 11.5151175 10.5673885 10.4595103 9.7494947 10.1467541 7.5380298 2.1577875 8.9843339 11.2583164 12.7543945 6.6464291 11.5255278 11.2332646 9.4629351 7.3574579 2.5907457 7.6671648 9.0544206 8.3136155 6.3554938 5.8857061 NA 12.6983010 10.1049841 6.4724813 10.4147017 10.1370677 8.4505671 6.9932045 2.8358635 15.6098274 12.9082831 1.8358432 8.9862394 NA 4.7783716 8.6286475 9.4329788 9.1026440 10.0355298 8.9332312 10.4454979 4.4652170 10.3219381 9.9329018 4.1934091 7.2515989 4.7547218 7.3827520 13.9909720 6.4819834 10.7060294 9.9696418 10.0947178 1.5363016 -1.1642376 8.8016418 8.6953922 11.2882273 NA 3.5637805 7.1645319 11.3564760 9.9805156 5.6106440 8.0790314 4.4208192 9.5990697 11.9157587 -0.5792751 13.3351427 4.1396414 6.8829817 11.6407950 11.5980317 12.9440959 6.9830620 10.2813896 10.1261642 9.8316387 10.3279609 1.5363016 8.8699685 11.9580383 8.5328250 6.9312540 10.2103536 9.6363529 3.9019481 3.6938438 9.7856841 10.7858664 10.4387881 9.1252998 15.4716321 10.7274512 9.9615937 8.3287122 8.5823716 12.4909967 7.2600238 12.4966889 12.1845164 9.5206059 9.9160087 7.6367573 9.2773906 -0.0111170 -0.0352930 0.0623060 0.0305010 0.0305010 0.0114810 -0.1034800 0.0186050 0.0000000 0.1522700 0.1522700 0.1522700 -0.0164860 -0.0164860 0.0473510 0.0473510 0.0473510 -0.0326440 -0.0326440 0.0060511 -0.0972870 0.0258930 -0.0298630 -0.0298630 0.0523240 0.0176250 0.0176250 0.0176250 0.0287040 -0.0111170 -0.0352930 -0.0431160 0.0305010 0.0047930 -0.1075600 -0.1034800 -0.0992640 0.0186050 0.0000000 0.0000000 0.0184650 0.0184650 0.1522700 -0.0108410 -0.0108410 -0.0108410 -0.0108410 -0.0164860 -0.0164860 0.0473510 0.0473510 -0.0326440 -0.0326440 -0.0326440 0.0060511 -0.0972870 -0.1006300 0.0319410 -0.1068400 -0.0298630 -0.0421660 0.0176250 0.0176250 0.0084243 0.0229470 0.0260340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 11.3602766 11.4177640 1.0057593 8.5135768 6.5840500 11.1844472 8.8816169 1.7427392 9.5432165 8.6359484 1.2953116 8.0956006 3.6938438 11.0628716 9.7621533 1.8358432 9.5769030 9.7284001 7.1166278 10.0643755 8.6891122 6.7306753 10.8100926 1.4208327 8.2891281 10.4454979 3.3277161 0.4208327 11.1740366 3.1212641 14.2068342 12.1736883 6.3904459 9.6663726 13.0036675 10.4754242 2.4208327 2.8358635 0.4208327 7.3176568 9.3589292 10.4799390 7.2683988 6.1258763 8.4689616 6.4095046 10.3143742 6.3788896 11.2032721 1.6432097 11.5798502 2.4797221 4.4357686 10.1239880 5.8068267 9.2021797 9.2610733 8.9976190 10.0001358 3.5082765 13.8559041 1.0057593 11.1252999 NA 9.0730672 4.7900526 7.9535004 7.0932454 13.088969 8.350572 9.253183 11.525528 11.155953 11.699753 5.885706 10.270746 9.394924 10.687997 13.073105 10.241797 8.695392 9.209810 2.083792 8.504742 9.887746 9.639988 3.742750 8.248427 9.064075 8.052603 9.039126 9.753602 8.612291 11.515118 7.424572 8.762153 6.580691 9.058731 10.203818 11.509608 7.940456 10.119814 4.450565 9.605282 9.102644 10.846385 9.905978 8.872031 10.131052 7.415173 NA 10.460915 7.916968 10.654639 9.980516 3.790053 10.903796 9.599070 7.918592 14.221197 10.813495 11.602697 11.725076 11.011719 8.956743 4.693838 TCGA-E2-A1BC 63 0 NA 501 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 NA NA 96.50.0 8 2 2 2 2 2 3 3 3 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.946798e-07 10.7367773 8.8672321 7.1046438 11.5629376 1.9919345 11.1896516 NA 10.4773702 11.7954288 7.6357994 9.7785398 7.3424410 8.6095947 9.1396572 8.0143112 9.5844005 10.8542708 9.4901942 8.0666199 0.6700245 10.8455649 9.6501549 13.2561514 10.9054313 9.7785398 10.6014916 3.6700132 11.0947066 -0.3300662 2.9919345 9.2975493 12.6214822 12.4915901 6.9646366 13.1322620 13.3653524 9.5723904 4.8794705 NA 6.9554174 8.6242117 10.5526584 8.1170986 13.1300872 -0.3300662 10.0483102 12.9872866 4.5279961 8.7915487 10.9078229 10.8653876 10.0120900 NA 13.0803037 7.4047252 0.6700245 8.1974924 -0.3300662 3.9919435 10.3512538 11.2231646 9.1778099 12.4670689 8.7941367 9.6357995 0.6700245 11.5503642 9.6643687 7.0537196 7.7680473 -0.3300662 10.4829949 14.6731379 8.4284720 11.2703929 10.8330360 7.5342017 1.9919345 2.8399394 8.0363374 9.4282385 11.7411425 NA 6.2091745 6.6007529 9.3138716 11.8988341 4.2549795 4.5769030 4.6242120 10.6472953 11.5911124 NA 13.6268452 6.4644314 7.9554174 12.5830917 12.4893961 13.3406716 7.0962798 9.8940171 11.0978519 10.8653691 11.3349070 5.7144104 8.2736418 12.8350794 10.1046436 NA 10.3219639 9.0708948 -0.3300662 3.4835449 10.2082042 10.1191639 10.3902596 9.2791941 15.3040890 9.7561516 10.5526584 8.5557119 2.8399394 15.6310354 8.5403799 13.2378526 13.3721880 10.1304712 8.9783544 8.8095669 10.0537197 0.0016198 0.0016198 0.0016198 0.0102850 0.0098242 -0.0796090 -0.5759500 0.0126550 -0.5121800 -0.5333800 -0.5333800 0.0040243 -0.0567120 -0.0567120 0.5079400 0.0012481 0.0012481 0.0023581 0.0023581 0.0088920 0.0043021 -0.0053992 -0.5418900 -0.0169790 -0.0169790 -0.0216470 -0.0216470 -0.0216470 -0.0120240 -0.0064486 0.0016198 -0.0066956 0.0098242 -0.0930060 -0.0796090 0.0125680 0.0125680 0.0126550 -0.5121800 -0.5381900 0.0031910 -0.5251200 -0.5556700 -0.0065050 -0.0065050 -0.0065050 -0.0065050 -0.0567120 -0.0611520 0.5079400 0.0012481 0.0023581 0.0023581 0.0023581 0.0088920 0.0043021 -0.0053992 -0.5801500 -0.5418900 -0.0169790 0.0372170 -0.0216470 -0.0216470 -0.0120240 -0.0058140 -0.0118870 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 8.5557119 13.6465795 8.2920671 9.7876584 1.4227712 10.2540383 2.2549870 1.2549568 7.3911147 8.5587586 NA 9.1036007 5.1294479 10.5595193 9.4097959 0.6700245 8.5029054 9.4530136 11.2750318 10.5131513 9.3378366 8.2993720 11.2559168 1.6700245 8.3282270 9.6357995 2.8399394 NA 10.2417680 2.6700245 13.1420715 10.9559954 8.3389004 9.7441569 7.8349223 8.9461398 5.8399394 NA NA 4.7992998 8.5708822 8.6444299 10.5287735 8.0751566 7.8480326 5.0623333 9.5678608 6.8399407 9.2828839 0.6700245 11.4410921 4.6700132 4.7992998 8.9239339 5.5255083 4.1294479 8.6671949 8.4348871 5.7992972 NA 13.7528297 NA 9.9919434 NA 8.9554174 5.5526599 8.3704551 7.9874277 12.564649 4.062329 9.005406 13.132262 10.782455 10.580658 13.130087 12.601861 9.211112 11.117099 13.368069 9.858604 9.428239 9.322860 NA 8.031959 11.359577 11.0650138 7.9274035 9.3102604 8.9986903 7.3494953 10.7209388 5.7144104 8.2624726 10.9054313 5.7361042 4.9179425 2.8399394 4.3715658 10.8903936 10.3503749 8.9737961 8.5495987 12.3255461 5.3424410 9.1778099 10.4140082 10.8548907 9.4709153 10.3521322 9.6909953 -0.3300662 9.2369637 7.4513752 5.2847251 11.8988341 7.3842605 10.1708572 10.6472953 7.6756402 13.7885509 10.1817680 10.8330360 12.7601278 9.8424429 9.7495001 3.4773665 TCGA-E2-A1BD 53 0 NA 520 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 96.50.0 5 5 3 3 2 1 1 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.112456e-07 10.6492010 3.5012608 6.8611576 11.6176630 1.9162855 9.7788328 -0.4056425 9.2158120 11.6973305 11.8060562 9.7098479 8.0995203 9.6414945 9.3839043 7.5329699 9.3000031 10.3383635 9.3768228 6.7508758 0.3313613 11.2229681 9.6185868 13.2417916 8.9519226 9.2959659 10.5152196 4.2761914 10.0310718 NA 4.3844505 6.6568667 10.6714088 12.3740216 6.9577753 12.5672308 13.4947658 9.4414281 7.6765199 3.0968690 6.2667959 8.1755710 11.1076048 7.0150325 13.0534179 2.5329652 12.2419790 13.7796332 5.7709585 10.7331523 11.1924231 9.2703276 5.8797719 -0.4056425 14.3552323 12.5708154 0.5943575 8.5427378 NA 5.2382251 9.1159712 9.8689429 9.7292248 11.4407751 9.7146086 9.6897676 1.0094188 11.0541438 10.1924231 8.4626789 8.1502378 8.4881776 12.5734981 14.2993730 8.7517091 11.2607426 10.6615809 9.9305052 2.0094188 6.3131896 9.3051771 8.3941917 11.6283671 NA 4.9162999 7.7858408 10.3990395 10.5709348 5.1893185 4.0094099 3.5329652 10.6337467 11.9796938 1.0094188 13.3856353 7.2573360 7.8517584 12.0452382 12.4525459 12.5327863 8.8263918 9.8790019 10.6722990 10.1626783 10.9189262 3.7098530 9.1768264 12.2367984 11.5343171 -1.9907962 10.6880083 8.6613566 1.0094188 4.5146651 8.9759136 11.3242746 10.6453529 8.6791789 15.1403105 10.0858897 9.8327753 8.9802330 1.9162855 15.4028572 9.5505048 13.5474455 13.1786677 10.6948140 10.2206881 8.6332895 11.3991121 0.8419900 1.5998000 1.5990000 0.0775890 0.0616510 -0.2113200 0.3556100 -0.3014500 -0.3086100 0.3508200 0.3508200 0.3734700 -0.0156040 -0.0156040 -0.3011000 -0.3011000 -0.3011000 -0.1082800 -0.1082800 0.3194800 -0.6726000 -0.3787600 0.0218840 0.0218840 0.0218840 0.0745520 0.0745520 0.0745520 0.2174500 -0.0229840 -0.0407520 -0.1455400 0.0616510 -0.1961200 -0.2181100 0.3556100 0.3556100 -0.3014500 -0.3086100 -0.3086100 0.3244700 0.3244700 0.3508200 0.3283400 0.3283400 0.3283400 0.3246300 -0.0156040 -0.0156040 -0.3011000 -0.3011000 -0.1082800 -0.1082800 -0.1082800 0.3194800 0.0300290 -0.3787600 -0.7096200 0.0218840 0.0218840 -0.2225600 0.0745520 0.0745520 0.1999700 0.0048579 -0.6945100 0.000 0.000 -0.301 -0.301 -0.108 -0.108 0.319 0.000 -0.379 0.475 -0.685 0.000 0.000 -0.223 -0.223 0.000 0.000 0.000 1.592 0.200 0.200 0.000 -0.669 -0.146 -0.146 0.000 0.000 -0.211 -0.211 0.356 0.356 -0.309 -0.309 0.324 0.324 0.351 0.351 0.278 0.278 0.000 0.000 0.000 -0.301 -0.301 -0.108 -0.108 0.319 0.000 -0.379 0.475 -0.685 0.000 0.000 -0.223 -0.223 0.000 0.000 0.000 1.592 0.200 0.200 0.000 -0.669 -0.146 -0.146 0.000 0.000 -0.211 -0.211 0.356 0.356 -0.309 -0.309 0.324 0.324 0.351 0.351 0.278 0.278 0.000 8.2358204 12.4812738 7.6074605 9.6414945 1.8311071 10.7234389 -0.4056425 -0.9905095 9.1673865 8.7313618 1.9162855 7.8470360 1.4688439 9.9831055 9.5191831 1.7098641 7.5032637 9.2673853 10.0296936 11.1833975 9.1946739 7.2597065 11.6924027 2.0094188 9.3941919 9.6897676 2.9163047 NA 10.8539178 2.8673825 12.9696364 12.4947343 8.1008436 9.5082573 8.1805850 9.6658330 3.9401480 1.7098641 0.5943575 9.0606170 9.1862046 10.0289988 10.2100002 4.9162999 8.6136370 6.9072536 10.5842382 6.1231509 9.0551677 -1.9907962 10.8367509 1.4688439 5.0317745 10.0234844 7.7207655 1.7098641 9.9559489 7.0150325 4.9866885 0.8167226 14.2037802 0.3313613 9.9497217 0.3313613 8.5300266 6.2715022 7.8843897 8.8215855 11.430973 4.532971 8.195522 12.567231 10.878809 11.252731 13.053418 12.162089 8.984195 10.096871 13.060107 9.755083 8.394192 8.973027 3.366966 7.519183 11.149918 11.271062 7.672966 8.911029 9.067400 8.417738 10.772789 5.823189 7.161693 8.951923 6.946047 3.053806 8.568785 7.238107 10.323708 10.484635 8.692815 8.923045 10.489441 3.331333 9.729225 11.034548 10.728155 9.858422 11.215812 8.003761 -1.990796 9.010542 6.130941 3.764293 10.570935 6.940146 11.092222 10.633747 7.245614 14.196857 10.162010 10.277658 12.570039 11.058065 10.194903 1.709864 TCGA-E2-A1IE 61 0 NA 1165 breast stage iib t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.781139e-08 10.583295394 6.017416431 6.442132374 11.850696419 -1.004913521 9.465199665 NA 10.070194084 12.080272717 8.584700237 10.456528658 7.247714890 10.169350815 8.949972578 8.189806278 9.274659792 10.764680462 9.140981316 6.510748347 1.164979311 10.499620000 10.000322880 13.891830998 10.911301948 8.898931152 10.445745012 3.518610671 11.127547390 -0.420047531 0.316956668 6.769836522 11.896198990 13.262713776 9.226870459 13.223492178 13.563896031 7.719563371 4.901938471 -0.004913521 8.129475707 8.348196118 9.002777331 7.187342175 13.662521184 3.454478617 9.986925401 14.247382047 5.510749929 9.124332271 11.621898983 9.405500603 9.534692737 NA 12.452579529 7.518611458 2.082498227 8.168726265 NA 4.421310835 10.074200615 10.146382965 9.873866554 10.429938003 9.437992744 9.936463775 3.454478617 10.580715992 10.380911661 6.494895575 7.235840962 -0.420047531 11.098337044 14.368186273 8.618985583 10.737148117 10.953058139 7.559198870 0.995014096 5.789465829 7.184873360 9.632579772 10.190421400 -0.420047531 5.541942232 7.124332271 10.504329401 10.341285972 4.437993368 3.877695178 3.925790592 9.775589048 11.874441042 5.280451579 12.804164183 7.214218080 7.987987594 11.914936764 11.554306808 12.922225338 7.904942243 10.600991671 11.316272706 10.685433606 11.021053877 5.580012789 8.562054633 12.373547323 11.737779698 -2.005203073 10.148284634 8.915401986 1.695503926 3.639197427 10.060801969 10.356718916 10.640257320 8.984443809 15.373708178 10.882269872 9.976259658 9.270591779 1.695503926 15.402565974 9.047617180 11.186725367 10.038076577 10.231661484 8.904192338 7.776408686 10.146845860 -0.00747200 -0.00747200 0.00152550 0.00555290 0.63390000 -0.00221680 -0.00435570 0.00235810 3.65690000 3.65690000 3.09620000 0.00027728 0.00597000 -0.68857000 0.00666530 0.66106000 0.66106000 0.00000000 0.00000000 0.02609200 0.00513590 0.03411300 -0.70523000 -0.01409000 0.62996000 -0.02438800 -0.02438800 -0.02438800 0.20060000 -0.06196500 -0.00747200 0.00124810 -0.69342000 -0.00221680 -0.00221680 -0.00435570 -0.00435570 0.01460900 -0.68661000 -0.68067000 0.61952000 -0.64874000 -0.69758000 0.00499690 0.00499690 0.00499690 0.00499690 -0.68857000 -0.69051000 -0.71640000 -0.69499000 0.00000000 0.00000000 0.00000000 -0.69378000 -0.69991000 0.02426800 -0.69369000 -0.70523000 0.62996000 0.01349200 -0.07467800 -0.02438800 0.00682220 0.00694350 0.38965000 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 7.209368556 11.724988577 5.889867747 8.671006348 2.302465287 11.365600413 1.802400040 -1.004913521 8.559198870 6.824771671 -1.004913521 7.465321514 5.325965593 10.675848298 9.182401306 4.749936450 7.273499105 9.657272533 9.253615170 9.861941721 9.878234726 8.303388063 10.997160988 0.995014096 9.122398875 9.936463775 0.995014096 -1.004913521 10.527161651 3.352603176 11.818814540 11.766022800 7.705855599 9.638003403 6.837399607 9.537597568 5.859236588 2.518610671 -1.004913521 3.667472082 9.188574505 9.260078128 11.237181274 4.609760871 9.732845782 6.831099455 9.395928654 5.827938398 10.390851119 -2.005203073 10.604689709 -0.004913521 6.522526608 9.836314720 6.913524940 1.580000725 8.554426156 7.936096680 7.642507361 NA 13.517232282 0.316956668 10.334620898 NA 8.050331907 5.667474921 7.993639834 8.117877342 14.041885 6.712725 8.517631 13.223492 10.760543 10.234648 13.662521 13.839044 9.598903 10.766745 11.941499 10.709724 9.632580 8.807226 -1.004914 8.330440 11.609184 11.028472 8.031223 8.949245 9.165600 9.587039 10.720215 3.901938 8.231063 10.911302 6.779684 NA 8.434880 7.774522 9.756185 9.519101 7.446755 8.721267 11.845236 2.853038 9.873867 9.767776 11.289383 8.835827 10.778661 8.748266 0.802400 8.797574 5.621123 2.901938 10.341286 5.989402 11.532268 9.775589 7.374600 13.687283 10.379293 9.612976 12.588207 10.207546 10.050671 0.580049 TCGA-E2-A1IF 74 0 NA 1138 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 117.51.0 NA NA 2 5 NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 2.781139e-08 10.6352266 7.8834180 7.2643225 11.2348813 -1.2354840 9.8345976 NA 8.7503184 10.9769730 10.8184025 9.5160207 7.3606663 8.0359395 9.4430768 8.6209023 8.8399558 9.8892441 9.6570195 7.7474700 4.5458387 11.1717444 10.6698636 12.4264774 8.9091349 9.1449378 10.1923133 5.2239090 9.8224684 0.3494785 1.9344033 7.6348415 11.8224684 12.1818018 7.0312628 12.3441461 12.6557857 10.6668517 5.7531606 0.7645160 7.6348415 8.8020235 9.3559990 8.5669932 12.5496226 0.7645160 12.1224409 13.0706808 5.6713670 10.5362879 9.7353015 8.8170447 4.9142249 -1.2354840 14.1589547 8.9381537 3.2239013 7.4957959 NA 4.0498747 8.7545806 10.2315727 10.4249183 10.7875379 9.0135901 10.0613928 1.0863762 10.0028814 9.9167615 7.1907413 8.8756124 6.5782580 10.3814849 14.4359901 6.8768116 10.5491115 10.2588323 8.2011883 2.8519389 6.6036797 7.7951435 7.6099669 11.3409610 -1.2354840 6.2402094 7.4369022 9.8749600 10.9001860 10.1422295 4.7186740 4.7868420 9.8684201 11.5688094 2.4649035 13.4464288 6.4509770 7.7531612 12.1902171 13.5147649 12.3752708 9.1020985 10.7861507 10.6455906 10.1488396 10.1980620 2.5718224 9.1132048 11.5088901 12.2031386 5.4369014 10.6076125 8.2032687 0.7645160 3.7191396 8.8782189 11.3298168 9.8217915 8.5750483 15.4155564 9.7777992 8.8439616 8.8047664 3.5193658 14.8635162 9.7259264 12.7129351 12.4087836 9.6448255 10.2167179 7.7784971 10.6533036 0.01225200 0.96763000 0.96763000 -0.00012310 -0.00012310 0.00000000 -0.00137030 -0.00164740 -0.00867610 -0.34353000 -0.34353000 -0.00095465 0.01225200 0.00473450 0.00584650 0.00584650 0.00584650 0.00390090 0.00390090 0.00209610 -0.00053892 -0.33536000 0.01253100 0.01253100 0.01253100 0.00515140 0.00515140 0.00515140 0.01532300 0.01225200 0.01225200 -0.00192440 -0.00012310 0.00445660 -0.01028000 -0.00137030 -0.00137030 -0.00164740 -0.00867610 -0.00867610 -0.00520370 -0.00150880 -0.34353000 0.00376210 0.00376210 0.00376210 0.00376210 0.00473450 0.00473450 0.00584650 0.00584650 0.00390090 0.00390090 0.00390090 0.00209610 -0.00053892 -0.33536000 -0.33397000 0.01253100 0.01253100 0.01420600 0.00515140 0.00515140 0.01532300 0.00362320 -0.34264000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 8.6516972 14.4258651 5.4369014 10.2663138 3.3023922 10.9754524 2.4649035 0.3494785 9.0852773 8.7826769 NA 7.9065840 4.3190687 10.5507463 9.4289239 2.0864101 8.5359662 9.4065284 10.9803130 11.0642571 9.2571311 6.0124033 11.8124526 1.9344033 9.6224577 10.0613928 5.4083314 NA 11.2550769 1.7644736 13.2942122 12.5328678 8.6271140 9.6255635 7.5814605 9.4235807 2.8519389 3.2239013 -0.2354840 7.2156873 9.4795806 10.8027098 10.0981911 5.2880374 9.0145263 8.1759876 10.4078819 5.9641491 9.6638336 -1.2354840 11.2399568 1.7644736 4.7186740 9.8755535 6.8728448 4.1567930 9.9884783 7.4509770 7.8466256 3.0124078 13.9885914 -1.2354840 10.3970175 -0.2354840 6.6713670 6.8143248 7.9268682 8.9167615 12.276600 6.012403 8.895047 12.344146 10.416425 11.557064 12.549623 11.151417 8.911682 10.017733 13.645017 9.720853 7.609967 9.234119 1.086376 7.364389 10.575048 11.198584 5.532660 8.825118 8.921824 7.898903 9.887453 6.609966 7.090906 8.909135 6.770101 3.408331 8.628663 6.312142 10.407882 10.165890 7.901468 9.925609 7.584656 5.478723 10.424918 10.717582 10.406528 10.192837 10.377345 7.447471 NA 9.262279 7.542554 6.182329 10.900186 7.961693 11.171232 9.868420 7.021865 14.096758 10.455784 10.686689 12.362296 10.750674 9.604468 2.349450 TCGA-E2-A1IG 45 0 NA 997 breast stage iib t2 n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 117.51.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 2.224912e-07 12.8147896 3.4000187 7.4809428 11.5749488 -0.3004484 10.3045998 NA 9.7247229 11.8228965 9.0713599 9.9791939 6.1258474 9.2182365 9.7710457 7.5944015 8.9987915 10.0192555 10.2527326 7.3790638 2.5069319 11.3447914 10.0919008 14.0285037 11.5383933 9.1153251 11.0313401 4.0919029 10.4519640 -1.3004484 2.7870563 8.1590151 12.1191486 13.1274854 8.8002457 13.0812615 13.5988459 9.3948116 7.2580044 4.6303181 6.4939995 8.6854255 12.2297458 8.9271993 12.6531433 NA 9.9223782 13.6068496 2.8695161 9.1453845 11.6334584 7.7136037 7.1047245 -1.3004484 13.4228203 8.1487318 1.5069573 6.5261314 0.6995516 3.9475072 9.5117608 9.8955707 8.4956228 10.5016958 9.8912595 10.4435762 3.8288651 10.8143017 10.4553055 7.5637698 7.6939371 12.0045050 11.2336430 15.2689050 8.2224786 10.9256945 11.9943477 8.7896957 2.1590156 7.4842179 8.1590151 8.9581493 10.8172265 -0.3004484 6.6995836 6.9187523 9.6139684 11.0101962 5.7219522 4.6064718 4.4000255 9.6310595 11.9284020 4.9849857 13.9370174 6.0746232 7.8894078 13.0031501 13.1738597 12.7778176 8.2788992 10.8246739 11.0659056 10.9109759 10.8410520 4.8894103 8.6797229 12.0195377 10.8320831 -0.3004484 10.4996744 8.7804010 0.2845141 3.3759569 9.5822265 10.3515319 10.2694390 8.9605030 15.1040098 10.9727962 9.4460976 7.7870465 4.5324728 15.8111266 8.6668095 12.4335520 11.1939390 10.0582346 9.8275777 8.3649195 10.6098550 -0.01409000 0.71490000 0.71490000 0.00027728 0.00027728 0.00819590 0.00624810 1.42710000 -0.00277070 3.65690000 1.47810000 0.09579800 -0.01574100 -0.00871460 0.01307400 3.65690000 -0.75054000 -0.00719580 -0.00719580 0.01880300 0.04131700 -0.00512270 -0.78420000 1.28460000 1.37410000 -0.05796400 -0.05796400 -0.05877700 -0.01821600 -0.01409000 -0.01409000 -0.00456950 0.00027728 0.00724270 0.00819590 0.00624810 0.00624810 -0.19112000 -0.00277070 -0.00277070 -0.00263220 -0.00263220 0.79588000 0.00166420 -0.01042900 -0.01042900 -0.01042900 -0.00871460 -0.00871460 0.01307400 -0.77782000 -0.00719580 -0.00719580 -0.00719580 -0.74336000 0.04131700 -0.01078400 -0.00249380 -0.78420000 1.28460000 0.00819590 -0.05796400 -0.05796400 -0.00484610 -0.00761010 -0.04115900 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 8.7843918 14.2637329 6.2994956 10.1600393 0.8663146 10.5776343 NA 3.1590156 8.6109754 8.3737757 -1.3004484 8.5604995 4.0919029 10.0175612 9.3675818 5.7656726 6.2073775 9.3271172 5.6184472 10.3045998 9.2544119 7.5037145 11.8274165 2.0215153 9.4069424 10.4435762 2.1590156 NA 11.2997286 2.4000187 11.9796291 12.3441157 8.0571356 10.2580040 9.1414900 9.3622518 6.3142941 0.2845141 NA 2.4000187 9.0789617 9.8436042 9.5269260 2.5069319 9.8748211 5.6882671 9.9409707 6.1258474 10.1671889 1.0214797 10.8175511 2.6995738 7.0789620 9.6332225 7.1445981 1.5069573 9.5037145 8.4069426 9.1100348 1.2845734 13.7668497 -0.3004484 11.6411813 NA 8.3470420 4.7656726 8.1610628 7.4677677 15.635817 5.630321 8.442735 13.081262 10.248887 10.189933 12.653143 13.223758 8.506938 10.695704 12.891799 10.651232 8.958149 10.598185 1.699596 8.199429 12.238863 11.1984326 6.6768640 8.4677677 9.4661124 9.2684896 10.3552572 6.4611340 9.5944011 11.5383933 6.6537795 2.7870563 6.7602795 7.8031599 11.7475593 10.2324263 8.9041544 9.4611346 11.0530059 2.6995738 8.4956228 10.9053766 11.4962314 9.7177835 10.7989312 8.9247908 NA 8.8753199 7.3859435 3.5069446 11.0101962 8.2290139 11.0800444 9.6310595 6.9427573 13.5772509 10.2939080 9.5316823 13.4289917 10.6967628 9.8992557 -0.3004484 TCGA-E2-A1IH 80 0 NA 1026 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 3 4 NA NA 1 3 2 3 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699824e-06 3.122126e-07 10.6416652 7.5343628 7.0611400 10.1915371 0.7142235 10.3259460 -0.6077925 10.2056358 11.4855079 7.7028681 10.1047825 7.6660507 8.7130558 9.7973970 6.2124351 9.1538066 9.2741342 10.8153714 8.4298026 4.1471439 9.9842453 9.3830685 8.7276458 11.5484965 9.1150629 10.7727165 8.2283060 11.1006928 2.0926810 -0.6077925 9.7005944 10.9340781 13.1129096 9.1437995 12.5397784 12.4712401 9.7298773 6.2931221 0.9772433 7.3406228 8.9903079 7.2901009 8.0486803 12.8864235 1.8516791 11.6388476 13.6673615 3.7498024 9.7541389 10.8853603 8.4034829 6.4690703 -0.0228300 13.9626460 12.2772844 3.0361165 7.3347703 NA 5.5721651 9.8346806 10.6845771 9.7781179 11.9983136 10.0247963 9.6874504 1.5621814 11.3428113 9.6419614 4.4583426 8.2188039 11.6410725 11.2546991 14.0865317 7.0622394 10.7840361 11.4325451 9.3673868 0.7142235 5.6017084 8.5968267 9.1562978 11.0347585 NA 6.4529512 7.0324998 10.6117265 11.1907273 7.4529512 8.0361115 4.2502340 10.9961136 12.2068379 3.5621814 14.1889542 3.5621814 7.7454021 12.5231477 13.3405314 12.9577741 8.2885879 10.0540335 11.4388679 10.7700787 10.6845771 4.6541605 8.3391619 12.4019091 12.2926506 NA 10.1218761 8.8289669 1.3922625 3.2078304 9.3866088 10.5653079 10.5489706 9.2259362 15.3810289 9.8042959 9.6971771 8.6994562 3.0926980 15.8152236 10.0835628 13.4691545 12.3542477 10.0513595 9.5986594 8.8403716 9.3217063 -0.8377700 0.5544300 0.5484100 0.1778400 0.1778400 -0.1849800 0.1746800 0.0134920 -0.0114030 2.6229000 -0.4991300 0.3399900 0.0083351 0.0158660 -0.1484400 -0.1353600 -0.1353600 0.1698600 0.1436900 -0.0030475 0.3757800 0.0000000 -0.4863800 0.2228300 0.2228300 0.4667300 0.0114000 -0.0018962 0.2406200 -0.4135500 -0.8377700 -0.1354900 0.1778400 -0.4974600 -0.1849800 0.1746800 0.1746800 0.0134920 -0.0114030 -0.0114030 0.3706800 0.3231800 -0.4280000 0.1608500 0.1608500 0.1608500 0.2222200 -0.5028700 0.4699800 -0.3322500 -0.8360700 0.1698600 -0.1689100 0.2015200 -0.0030475 -0.5070100 0.0000000 -0.4872200 -0.4863800 0.2228300 -0.3489300 -0.5202000 -0.0018962 0.2406200 -0.1132500 -0.4799700 0.000 0.000 -0.148 -0.836 0.144 0.144 0.000 -0.500 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 0.000 0.000 -0.148 -0.836 0.144 0.144 0.000 -0.500 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 10.1163429 12.8555882 9.1065009 10.0188771 5.3522571 10.2168164 4.1201777 NA 8.4650578 8.8289669 1.7141796 7.8881106 3.7498024 10.4717402 9.5350006 2.2991567 10.8843590 9.5646830 9.7942016 10.3634397 9.0041932 7.4393796 11.0401635 2.7141796 7.4393796 9.6874504 4.2748953 NA 10.4055781 2.7845668 12.7197379 11.7626704 9.4243011 10.6416652 8.6660510 9.4677345 4.9772158 3.0926980 1.1996252 0.9772433 7.7541994 7.0143073 10.4441441 5.7231735 8.6896989 5.9468431 9.9468443 4.9000505 9.4208523 -0.6077925 10.1235745 3.2502340 4.8516891 10.2884479 6.4519249 7.1133546 9.7656644 9.1039225 8.0252509 -0.6077925 13.6949301 1.1996252 9.9991233 NA 8.4090637 5.7141823 8.8122155 8.9800330 13.376496 6.601708 8.847583 12.539778 10.013850 10.745678 12.886424 10.970628 9.205491 10.600185 13.554096 10.322253 9.156298 9.477064 NA 7.919732 11.152560 10.783768 6.780273 8.856791 8.443465 8.467735 10.056818 7.202827 7.299146 11.548497 7.425678 1.392262 6.287073 7.104886 11.116556 10.893346 9.422923 7.716436 10.365594 8.565933 9.778118 10.819044 11.468069 9.677658 10.355874 7.845526 1.392262 8.602111 9.075882 8.966849 11.190727 8.495543 10.525719 10.996114 6.452951 13.639033 10.249848 10.674185 12.869634 10.343904 9.587628 2.915827 TCGA-E2-A1II 51 0 NA 1025 breast stage i t1c n0 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 117.51.0 NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4.727937e-07 1.668684e-07 11.94533091 2.38233524 5.40024759 11.34724376 NA 9.63593646 NA 9.53916696 11.46287645 9.50644664 9.02184696 8.26741173 8.70064224 9.59177870 6.91214685 8.74339177 8.74514588 10.29760723 9.23657035 5.88057534 9.68336416 9.71055144 12.34507680 11.36531897 10.32952392 10.35156793 8.70244907 10.72528897 7.75736467 0.06046249 9.13185953 10.53410305 12.83255615 5.36417669 10.88057625 12.15760643 8.12917533 6.71144948 3.58396429 7.82858144 8.74689787 10.26006966 9.63309749 5.45271403 NA 10.33884678 7.77464278 6.02618258 9.38963306 10.83147399 6.30832447 3.70425227 -0.93953751 14.90068347 11.21426593 2.96727930 8.35271881 NA 5.78831768 10.04837175 10.84952333 7.43108469 9.98149436 10.07371997 9.26252101 3.30833175 10.17218496 10.73767645 3.91837669 7.82858144 NA 8.06882610 13.75589746 8.48090489 10.79848954 10.23219953 12.77464280 -0.93953751 NA 8.51366799 8.96427906 9.83847438 NA 2.38233524 8.12648663 11.96126410 10.79891183 7.22026900 8.69702176 5.30832447 9.28921592 11.92902693 -0.93953751 12.97422167 3.45271403 7.24030670 11.49032704 8.58395940 12.63924166 6.15842994 10.84870775 10.71279411 10.83806359 10.82485423 5.14786022 9.46020932 11.89289176 8.83847438 1.86773835 10.19866910 10.68153342 0.06046249 2.31286844 9.18451859 11.27198142 10.24836785 9.59177870 14.65212414 10.27167720 9.66495050 6.34579908 4.55224795 11.30654405 4.41794700 12.84124458 12.31099178 10.29820477 9.50334078 8.28439892 10.13560233 0.1698600 0.6079200 0.5581500 -0.2784600 0.1861600 -0.2882200 0.6636400 0.6857000 0.1397600 0.2212900 0.1736200 1.3919000 -0.0308130 -0.0308130 0.1795000 0.1795000 0.1795000 1.2109000 0.6377400 -0.2760700 -0.2773900 -0.2661200 -0.2448400 -0.2448400 -0.2448400 0.2022800 0.2022800 0.2022800 0.2128400 -0.2482500 0.1698600 -0.2821500 -0.2784600 -0.2882200 -0.3201900 -0.2708100 -0.2708100 0.6857000 0.1397600 0.0612220 0.2159100 -0.2882200 -0.3204200 0.6619800 0.6708500 -0.2653500 -0.2631200 -0.0308130 0.0746960 0.1795000 0.1795000 1.2109000 0.6377400 0.6579200 -0.2760700 -0.2773900 -0.2661200 -0.2702100 -0.2448400 -0.2448400 -0.0070987 -0.2032400 0.2022800 0.2128400 -0.0310860 -0.2566000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 9.96878989 11.35874630 1.64537887 8.02329306 6.43543691 11.91370683 1.06039331 NA 10.15645350 5.48666289 5.48666289 11.02182524 -0.93953751 10.43706530 9.65285429 1.38233524 6.98521009 9.86533489 7.72573298 8.15050992 9.00257455 7.43977604 9.79256468 3.45271403 9.13051831 9.26252101 4.84175680 NA 9.84829978 7.62263976 14.08800096 12.25914924 6.47825028 9.52800277 10.85521928 10.39746158 1.64537887 5.38232487 -0.93953751 NA 9.34232740 8.39131406 8.14520565 2.76083835 6.52914316 5.91837908 9.96653631 4.78832029 9.47296717 2.76083835 11.65775155 4.10478953 1.06039331 10.97682543 5.89278201 7.67142218 9.47719484 9.19738848 9.07302194 NA 13.85988129 0.06046249 10.62120774 NA 10.00803428 3.76083835 7.97926055 7.68244899 9.150510 8.199949 8.066022 10.880576 10.049082 11.886151 5.452714 9.780641 9.581016 11.867148 13.450969 13.174546 8.964279 7.560243 3.583964 7.404693 10.258228 10.360178 6.158430 8.752141 9.888534 9.051919 10.076307 8.532073 5.583958 11.365319 11.065671 NA 7.345799 9.154026 12.111096 11.195786 8.348110 8.505412 9.518804 8.707856 7.431085 10.327184 11.581752 9.303571 10.705155 9.164996 NA 9.737192 7.567042 8.652854 10.798912 5.269852 10.607774 9.289216 8.116303 14.105858 10.426720 11.570914 12.302529 11.256999 8.790018 3.382321 TCGA-E2-A1IJ 57 0 NA 865 breast stage i t1c n0 m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 0 white not hispanic or latino 117.51.0 NA NA 2 5 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 2.781139e-08 10.9662475 7.5510553 6.5900495 11.1115193 0.9462068 10.2492131 -0.6386808 9.5900497 11.5728152 8.9405471 9.5160492 7.5361571 8.5436254 9.5609035 7.7790837 9.1605126 10.0728980 9.9253806 7.9978558 3.2681199 10.9837405 10.4367102 9.7864469 10.8984495 9.5147831 10.4028902 7.3724585 10.4717143 -0.6386808 5.8530849 8.9499457 13.0505739 12.7815861 7.5852330 13.4812259 12.4615649 10.6610115 4.9759419 3.5311569 7.3555846 8.8165584 8.5633549 9.2238685 12.4775750 0.9462068 11.3717592 12.8439130 5.3385100 9.4814431 10.1845983 6.8847933 6.1161194 NA 14.4195078 9.2993404 1.9462068 9.0265669 -0.6386808 5.1425891 9.7567651 10.3241271 9.4995029 11.0967871 9.8308729 10.0494814 3.3612350 11.0599357 10.0486068 7.0265666 8.5972451 12.0737581 10.4015208 14.8062136 8.5986082 10.6274319 11.2078968 9.5719024 2.5311444 5.6091580 9.0494813 8.6581472 11.9595162 -0.6386808 6.3612315 7.2129798 9.7373564 10.3918982 6.7874965 6.8041749 5.2681199 10.3470730 11.5972452 2.8206691 13.5861371 6.0336565 7.1877796 12.4876129 14.0585788 12.6340066 8.4513434 10.6385185 10.9964957 10.6281288 10.8052106 4.1685859 8.5559879 11.7605090 9.2362125 NA 10.5559879 8.8103798 1.3612069 2.1706301 9.4447103 10.4400490 9.9263331 8.8389893 15.3196931 10.2867855 9.5398959 8.3241270 4.3154286 14.7860534 9.9158199 13.2807462 12.5317821 9.9405471 9.9396037 8.1621310 10.4104193 -0.00180140 0.51037000 0.51037000 0.00110930 0.00110930 0.00332990 -0.00152430 0.00000000 0.00000000 0.00416320 0.00416320 0.00416320 -0.00401620 -0.00401620 -0.00180140 -0.03750000 -0.03750000 -0.00263220 -0.00263220 0.01321300 0.00083195 -0.01130100 -0.33653000 0.31723000 0.31723000 -0.00401620 -0.00401620 -0.00401620 0.00444110 -0.00393170 -0.00180140 -0.00249380 0.00110930 0.00332990 0.00332990 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 0.52976000 0.00819590 0.00416320 -0.00377220 -0.00377220 -0.00377220 0.00097064 -0.46887000 -0.00138580 -0.00180140 -0.03750000 -0.00263220 -0.00263220 0.00097064 -0.00180140 0.00083195 -0.00110870 -0.23631000 -0.35842000 0.31723000 0.00360760 -0.00401620 -0.00401620 0.00208050 -0.00705760 -0.41059000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.9731780 14.0203908 7.4001502 10.5097076 3.4056248 10.6854116 1.3612069 2.1685779 8.4905140 8.5286491 NA 8.2377482 3.4486896 9.8906616 9.2004350 2.1685779 9.6138964 9.5948508 10.2711241 10.6741140 9.4673753 7.5559879 11.7772368 3.8847933 9.8600802 10.0494814 3.8206589 NA 10.9414896 3.3612350 12.9124587 11.8754520 8.0993231 9.9518181 8.6809031 9.1798133 2.9461881 2.1685779 0.9462068 4.8847933 8.3008101 9.5485830 9.8749586 4.7535511 8.1870487 6.1556460 9.7384416 5.6650118 9.5924522 NA 11.3877545 3.1685939 5.1425891 9.5714032 6.4775753 5.2192111 10.5485831 8.9081254 7.7055266 NA 13.6875903 0.9462068 10.3640461 -0.6386808 9.1161186 5.7187835 7.6650118 8.6943864 12.792526 5.194123 8.707745 13.481226 10.461236 10.456628 12.477575 12.061888 9.145359 10.658721 13.328637 10.126932 8.658147 10.871006 NA 7.669570 10.933458 11.237364 5.033656 9.001476 8.785397 8.136018 10.121593 7.687661 7.560904 10.898449 8.253015 5.219211 6.762111 6.146128 11.888952 10.893100 7.979617 9.124443 11.089152 6.968561 9.499503 10.570075 10.857086 10.466485 10.472367 8.716582 NA 10.039329 7.427051 6.908126 10.391898 8.923473 10.947527 10.347073 7.262098 13.821815 9.878900 10.338511 13.260210 10.687099 9.720981 2.361235 TCGA-E2-A1IK 71 0 NA 689 breast stage iia t1c n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 117.51.0 NA NA 2 5 NA NA 1 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 8.343418e-08 11.7646412 4.4739297 7.4374050 10.9512847 -0.8478815 9.3577963 NA 9.1936624 11.2944293 7.6358190 9.6124590 7.1799091 8.8349978 8.8472315 8.9464189 9.0708664 10.7597957 9.9625748 6.4829193 2.6114321 9.1003704 10.6726218 13.9054810 11.4554985 9.5205095 10.5254121 5.9721826 9.4152723 NA NA 7.1061996 11.4040771 13.2529939 4.6755676 10.6647435 12.3501411 10.3675361 6.7218593 3.6755676 6.9201873 8.1206697 10.2099948 5.5443215 13.8716058 0.1519887 10.5486079 14.1745443 6.5270422 10.1444883 10.2566018 4.6114321 8.6478581 0.1519887 15.7728223 9.2552909 NA 7.9561339 NA 4.1963946 9.2709442 9.9341822 9.7369655 9.6930997 9.6843591 9.7868141 1.4739427 10.4443247 9.4339332 6.3999298 6.5095549 7.2447606 11.8831099 13.9465205 7.1791905 11.3744961 10.6473585 8.0915824 0.1519887 NA 7.6196089 8.3951772 10.0834793 0.7369944 3.4739297 7.2180924 9.0453045 11.1761039 6.9135549 5.3614561 3.4739297 10.1792179 11.3981499 NA 13.2371436 7.0223678 6.9721826 11.1660236 9.7931517 12.2993670 7.4918531 10.7994615 10.4580648 10.6175695 10.2915544 3.6755676 8.6814338 11.5367868 9.8021573 -0.8478815 10.2394659 8.4648859 0.7369944 0.4911861 9.2722409 10.6348111 9.4477720 8.9333628 15.2018091 10.1881767 9.4500656 6.2394668 2.8524384 16.4723894 9.0483354 11.2889942 11.6981741 9.6568220 8.8472315 7.5139470 9.8826430 0.00069327 0.00069327 0.00069327 -0.06397200 -0.06397200 0.00221930 0.00208050 0.00305220 0.00305220 -0.00156890 -0.00156890 -0.00156890 0.00069327 0.00069327 0.00000000 0.00000000 0.00000000 0.00235810 0.00235810 0.00124810 -0.00013862 0.00041593 -0.00097017 -0.00097017 -0.00097017 0.00069327 0.00069327 0.00069327 -0.00553750 0.00069327 0.00069327 -0.01106000 -0.06397200 0.00221930 0.00221930 0.00208050 0.00208050 0.00305220 0.00305220 0.00305220 -0.00041585 -0.00041585 -0.00156890 -0.00277070 -0.00277070 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00000000 0.00000000 0.00235810 0.00235810 0.00235810 0.00124810 -0.00013862 0.00041593 -0.00193990 -0.00097017 -0.00097017 0.00166420 0.00069327 0.00069327 -0.00553750 0.00124810 -0.00816240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.3808216 10.7099454 3.4739297 8.7994617 3.4925711 9.8722473 2.8524384 -0.8478815 8.6358190 6.5270422 -0.8478815 6.3516760 0.7369944 10.6358189 8.7218586 0.1519887 7.1235462 8.9512847 11.5977939 10.7402493 10.0949500 7.2394658 10.4152723 3.3999367 10.2928328 9.7868141 2.4739427 0.1519887 10.1061994 3.8524384 13.4761836 12.9034426 7.1688115 10.8623791 9.5539493 9.3430622 4.8524434 2.4739427 NA 2.3219281 9.0693751 10.3449124 9.5453935 2.6114321 9.1535662 7.6032139 10.6221535 6.5613934 9.5302979 NA 13.2440995 2.8524384 9.5150428 9.7005167 7.1271060 5.3999298 9.1854260 7.2966611 10.2728889 -0.8478815 13.9588044 -0.8478815 11.3020677 NA 9.1757574 5.8662478 7.9201873 9.8645301 14.142392 4.879921 8.738843 10.664744 10.054378 10.566160 13.871606 12.623170 8.784998 10.283860 12.815228 11.136422 8.395177 7.755629 2.151989 7.599086 11.380521 10.269646 7.827960 8.716153 8.710424 7.729432 9.464807 6.651850 8.790439 11.455498 7.058893 NA 8.601152 7.329473 11.945200 10.052870 8.522691 9.488510 10.816895 6.464886 9.736966 10.830603 10.758871 8.910226 10.320675 8.913554 NA 9.412205 6.643856 7.129283 11.176104 4.906891 11.687278 10.179218 6.683385 14.170899 10.966185 10.586631 12.883004 9.568801 8.704672 1.473943 TCGA-E2-A1IL 78 0 NA 118 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma no 1 white not hispanic or latino 120.48.0 NA NA 2 2 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 8.343418e-08 10.7385876 8.0249230 6.0550850 11.6096735 1.1971105 10.8535286 1.1971105 10.3695313 12.4371795 10.0612899 9.8366253 8.2653445 8.8162234 8.4488229 7.9493172 8.3869282 11.5719259 9.0249227 6.7206656 2.0450934 10.6736474 9.6292280 13.2194022 10.7642993 9.2845666 10.5885621 4.6565364 10.7906816 -0.1248490 1.6825284 8.6115774 12.7023198 11.9501783 6.6367276 13.2932917 13.4216481 9.8954611 7.7790574 5.5333858 6.7578180 8.3284461 10.5248809 7.9889175 13.3904442 2.4601397 10.6254638 13.6793571 8.3730274 9.4065571 10.9054979 10.1123856 10.2653445 -1.1246917 14.2311282 10.5838285 3.6300676 8.6793066 0.4601659 3.5756149 10.7068787 10.5338334 10.3279316 11.4825059 9.6671524 9.4852777 2.3345969 12.4150614 10.6166426 7.1135807 8.7547589 -0.1248490 11.2626545 14.3905367 9.0030538 11.9853326 11.6423255 8.3305028 2.1971105 6.1039948 9.2316275 9.1302042 12.1078963 1.4601135 5.9412636 6.9573250 8.4862003 11.0067111 3.3987334 4.4898833 4.9412660 9.6491390 11.5917808 3.2674909 13.3317225 6.2760555 7.2327279 12.1441561 12.4673990 13.1540606 8.3610051 10.9856589 10.9085986 10.8531710 11.6758733 5.6030952 8.5118001 11.5990498 10.4402776 -0.1248490 10.2349252 9.0723923 -0.1248490 5.0050766 9.4880442 10.6124230 9.9399184 9.5045322 14.8581246 10.4478759 9.9506547 8.6809196 2.3345969 14.4926144 9.9941166 13.9683043 11.4880441 10.6776920 10.0557064 8.7516927 11.1166672 0.00055459 0.64781000 0.65940000 0.00013863 0.00741170 0.00930980 0.00708260 0.67715000 -0.71417000 0.00263570 0.00263570 -0.72906000 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.01056400 0.00000000 0.64649000 -0.02000100 -0.02000100 -0.02000100 -0.03422300 -0.03422300 -0.03422300 -0.01092200 -0.01174900 0.00055459 -0.01652900 0.00013863 0.00930980 0.01349200 0.00708260 0.00708260 0.67715000 -0.71417000 -0.71417000 0.00106230 0.00287120 0.00263570 -0.00152430 -0.00152430 -0.00152430 -0.00995650 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.00208050 -0.70397000 -0.00593800 -0.01202400 -0.73512000 -0.02000100 -0.02000100 0.00263570 -0.03422300 -0.03422300 -0.01092200 -0.00221680 -0.73178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7237985 13.3919837 7.0650003 9.9666110 2.9151958 12.1003830 0.8751510 -0.1248490 8.5154207 8.6499628 -1.1246917 8.1812373 5.0846298 9.8169569 9.7041054 0.4601659 8.4316819 9.3589913 11.1066968 10.4746236 10.2326837 8.7128035 11.4347917 2.1971105 10.5664830 9.4852777 3.5190260 NA 10.2977661 3.0450934 12.3325565 12.0047806 7.7269245 10.1959761 8.7470809 9.1039943 7.1789566 1.1971105 0.8751510 2.6825284 9.2316275 8.8905908 10.0680848 5.3829715 8.8891124 6.4825063 10.2577996 6.1513007 9.7253625 -1.1246917 13.7327679 0.4601659 5.0451022 9.4960918 6.7948733 3.2674909 8.9412648 7.9573244 5.3829715 1.4601135 13.6440319 0.8751510 10.3330695 -1.1246917 7.8409598 5.1971026 7.5440603 9.1651944 13.055677 4.547598 8.780563 13.293292 10.553014 10.978791 13.390444 13.559596 9.328446 11.124289 13.029836 8.248040 9.130204 9.332556 -0.124849 7.338700 11.272048 11.506807 8.740909 8.855315 9.387916 8.007032 10.632874 5.460140 8.408506 10.764299 5.720667 3.630068 5.897543 5.564476 10.879045 10.314487 8.836625 8.243682 13.031022 5.045102 10.327932 10.099177 10.614112 10.305105 10.939918 9.400696 NA 9.609038 6.907166 4.123103 11.006711 6.701724 10.415735 9.649139 8.001880 13.470666 10.004459 10.400696 13.061677 10.170371 10.130204 2.197111 TCGA-E2-A1IN 60 0 NA 675 breast stage i t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 109.61.0 NA NA 5 2 NA NA 1 1 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.509738e-06 1.665134e-06 11.4995309 3.6788043 7.1465880 11.6280457 0.1241958 10.5127754 NA 10.4228553 11.7112942 10.1061439 9.9519596 6.8211872 8.3768855 8.9047598 9.3003931 8.7653687 10.3461091 10.2557554 7.5979259 0.7092024 10.4052806 9.8597759 14.3035654 10.6357256 9.3880759 10.9767495 4.7966445 10.5327938 -0.8756719 1.8246457 8.1185736 10.6477819 12.0775979 7.6883692 12.5128427 13.2103562 9.8500122 6.6749662 2.7680784 7.8453194 8.6270516 8.1521261 8.9380011 13.1266834 -0.8756719 10.5138512 13.8348919 2.7680784 9.8650589 11.0923467 8.5588481 6.7352446 0.1241958 13.7297553 12.0556195 1.1241958 9.2070343 1.2941355 3.9315791 9.6964465 10.1068571 8.0341128 11.8684231 10.0824101 9.8037001 2.6477750 11.1104175 10.2258674 5.9634233 7.8315790 6.1242206 11.8144362 14.8132624 8.2643980 10.8408250 10.8146545 8.7082428 2.7680784 4.8924056 8.2941451 8.9121226 10.9825895 -0.2908859 6.8555388 6.8757641 10.0179006 10.8069951 6.0371098 5.5250979 4.9315743 10.2441337 12.0775979 4.2739634 13.7040367 5.6320151 7.4280008 12.1690409 14.0243792 12.4491037 8.1548870 10.4878072 10.6752072 9.9925332 10.8770187 4.6633788 8.4817720 11.7778488 12.1085494 1.4461503 10.1960174 9.7837700 0.1241958 4.1060719 9.5138513 11.3651603 10.0011205 9.3330639 15.0356938 10.3712574 10.4416326 8.4461479 4.4461503 15.6761910 9.0265951 12.5704632 12.1312472 10.3044400 9.6477818 8.6864624 10.5492076 0.8278400 1.3748000 1.3748000 0.0155870 0.0155870 -0.0042929 0.7408100 0.4184800 0.0134920 1.1707000 1.1707000 1.1707000 -0.3697400 -0.3697400 -0.0091286 -0.0091286 -0.0091286 0.0317180 0.0317180 -0.3643600 0.0301690 -0.0034627 -1.0032000 0.0335490 0.0335490 -0.1672600 0.5879300 0.5829800 1.5125000 -0.0224690 -0.0221950 -0.3125600 0.0155870 -0.0042929 -0.0042929 0.7408100 0.7332200 0.4184800 0.0134920 0.0134920 0.0000000 0.0000000 -0.7517600 -0.0814720 -0.0814720 -0.0814720 -0.0814720 -0.3697400 -0.8011500 -0.0091286 -0.0022678 0.0317180 0.0317180 0.0317180 -0.3571500 0.0301690 -0.0103700 0.0461330 -1.2929000 0.0335490 -0.7535700 -0.1672600 0.5879300 0.3657500 0.2477800 -0.3523600 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 9.2037048 14.2029962 8.3103342 10.1761086 1.6096604 11.2941450 -0.8756719 -0.2908859 8.5452329 9.8350264 0.1241958 8.0109074 1.7092024 10.0780526 8.9704939 2.2116975 7.2169767 9.6019782 8.0490322 9.3780674 9.2147162 8.2235678 11.2086962 2.9821996 8.9845310 9.8037001 1.7092024 NA 10.2941449 2.6477750 13.1669480 12.3249653 8.6130642 10.4929992 8.2457533 9.8067756 4.8246609 -0.8756719 0.4461503 4.4640670 8.4640699 8.7380095 10.1531620 4.0311128 7.1270348 5.4551365 9.9432015 4.6633788 9.6893221 -1.8756719 10.6689429 2.8246660 4.0068635 9.8939669 5.5687375 1.8246457 9.1876151 7.5979259 5.5420723 NA 14.1120169 0.4461503 10.7236679 NA 8.0564345 7.7535765 8.4382367 8.6290389 13.521042 5.944399 8.729700 12.512843 9.976749 11.102752 13.126683 11.971081 9.307855 10.460448 13.356753 10.596149 8.912123 10.466850 2.124229 7.333673 12.103913 11.3525877 7.9331843 8.9483830 9.3342824 8.1335029 10.2543174 6.3673938 8.3804286 10.6357256 7.6019780 6.0725882 5.4003432 7.2931424 10.9928496 10.3554411 9.3780674 8.4484005 10.5933529 4.0784134 8.0341128 10.4099112 10.9145684 9.7361668 10.7567608 8.8749270 3.8521387 9.0499079 7.1809663 4.3530409 10.8069951 9.1658790 10.3136461 10.2441337 7.5569083 14.3346820 10.3783628 10.7345527 12.9061943 10.6597384 9.6394270 0.4461503 TCGA-E2-A1IO 37 0 NA 638 breast stage i t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 117.51.0 NA NA 4 2 NA NA 3 3 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.059253e-07 2.781139e-08 11.3951956 8.4188338 6.9566642 11.4221517 0.8905634 10.6317051 0.8905634 9.9261992 12.4123720 10.8239709 9.4528176 7.9566642 9.7088378 9.9880806 6.8070522 9.4320591 10.7266256 10.0321715 7.9886074 2.0280740 10.6660209 10.0907382 13.8091031 10.5878904 9.1989142 10.9333290 7.3920143 10.5085936 0.1535460 5.6020708 8.7950594 12.3660047 12.5413578 7.5459275 13.1510832 13.6013817 10.0115907 5.4512903 0.8905634 7.1308897 8.6225731 9.0022325 9.0534701 12.4005481 5.1232358 10.3413742 12.8289052 6.0362528 9.0659401 11.1373159 7.0403226 2.8165792 NA 13.4198921 9.7094769 4.1232358 8.2999663 1.1536108 5.6347356 9.9029204 10.1327966 9.2991173 10.9590848 10.7354379 10.0053587 0.5686159 11.9201386 10.4577708 6.4203965 7.2690865 2.7385733 11.4932741 15.1264848 9.2181280 11.0569894 11.6077375 8.4405524 2.2690930 6.9907121 8.8213126 9.6293431 11.3220729 -0.4312869 5.9864997 7.0882837 10.1184318 11.0789168 8.9184813 6.4755373 5.2410736 9.8552049 11.5045488 3.1536108 12.9074532 4.0280829 6.8678557 12.6037899 13.0266692 12.7782528 8.1778261 10.4871377 10.7787096 10.4417452 11.8411312 5.1385032 8.0764421 12.1078060 11.6887230 -0.4312869 10.5355131 9.4770398 1.8905634 4.5249350 9.7980669 9.5337099 9.8064546 9.8213126 14.5785195 10.3037801 10.5162841 8.0136621 3.1536108 14.6019411 7.9062689 12.9038979 12.6000899 10.1727370 10.1925287 8.4405524 10.4829127 0.029967 0.044574 0.060079 -0.426480 0.134060 1.647200 0.011958 -0.475960 -0.018842 -0.468650 -0.468650 0.570770 0.055088 0.055088 0.029747 0.029747 0.029747 0.266710 1.431900 -0.444370 0.120350 0.049398 -0.487010 0.017596 0.022865 -0.084130 -0.084130 0.435980 0.585420 0.029967 0.029967 0.000000 -0.426480 0.077862 -0.438640 -0.458220 -0.458220 0.141020 -0.018842 -0.018842 0.244980 -0.004396 -0.468650 -0.444150 -0.474900 -0.443510 0.476500 0.055088 -0.045371 0.029747 0.029747 -0.467350 -0.457680 -0.457680 -0.444370 0.093745 -0.462460 -0.482810 -0.487010 0.017596 -0.159880 -0.084130 -0.084130 0.585420 -0.470780 -0.493500 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 10.1998242 14.2499679 9.5279246 10.5993143 4.8905732 10.8007682 2.3760125 0.8905634 8.4141372 8.6306934 0.5686159 8.6890793 2.3760125 9.9764460 9.6300184 1.8905634 10.1498477 10.3029334 8.8917020 9.3800218 9.9733098 8.3351759 10.7043565 3.9949146 8.4250728 10.0053587 4.9261987 -1.4312869 10.9631099 2.9609565 12.4737521 12.4133529 8.4830322 10.0074390 8.0280790 8.9949120 9.5770759 2.1536108 -1.4312869 4.3760055 8.6198561 9.3735849 9.9588161 4.5910151 7.6465846 6.1759776 9.7304088 8.1097440 9.5401906 NA 10.9425998 4.0604971 3.6979295 9.5040332 5.1753849 6.3368314 9.6347363 8.1251531 8.4188338 NA 13.3385883 0.5686159 10.7710772 -0.4312869 7.1460758 6.1685598 7.7829661 7.8563595 12.560018 5.623928 9.715852 13.151083 9.931139 9.737946 12.400548 13.226468 9.299966 11.135177 12.919379 10.676845 9.629343 8.722199 1.738552 7.187032 11.435540 12.276761 6.835434 9.236646 8.886060 8.121316 11.563073 7.780535 8.140400 10.587890 6.481536 4.269086 8.054476 6.895975 11.747779 11.134225 7.770771 8.288036 11.941104 7.610307 9.299117 10.398370 11.634568 10.358588 11.551997 10.003796 6.130890 9.265041 8.228536 7.782966 11.078917 8.103922 11.704722 9.855205 7.937154 13.583147 10.214756 10.379620 12.846007 11.088775 10.622912 3.212507 TCGA-E2-A1IU 60 0 NA 337 breast stage ia t1c n0 (mol+) m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 120.48.0 NA NA 2 2 NA NA 3 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 11.0698796 5.7509843 7.5377395 11.6960919 0.3025238 10.9267089 -1.2824387 9.8241231 11.6813594 10.1001843 9.6969854 7.7509829 8.8634925 9.4395139 8.5021949 9.4145277 10.2711895 9.2469906 6.7564789 0.7175613 10.1769918 9.9073848 12.9839807 11.7456389 8.6586078 10.5397327 5.1098787 10.2425916 1.0394894 3.4180010 7.6364238 12.4390866 12.4301560 7.3578053 13.3926351 13.4484548 9.4145277 5.9270146 3.1098787 7.0838824 8.3432692 9.8247772 7.9820027 12.7026906 3.1098787 9.7329753 13.0495967 7.1055775 9.5622659 11.1157694 6.1269501 6.7728424 -1.2824387 13.9292269 8.6078244 2.6244519 7.3614166 NA 5.3899866 10.1568716 10.8257579 11.5023995 11.4354508 10.1983504 9.8692110 2.8874863 11.5654005 10.0579667 7.2213860 8.2836144 6.5313409 11.1831266 14.2942512 6.6051461 12.5143096 11.3341091 8.0484771 1.0394894 6.6600744 7.0029624 9.2013761 12.8813671 NA 4.0029635 6.8155921 9.2769372 11.4108294 5.4318068 5.6482986 4.3899866 10.6717565 11.4832607 1.3025238 13.9639297 6.6948398 7.8023684 12.0540668 12.1701875 12.9574570 7.8799514 10.4106115 10.9796551 11.0658596 11.1958242 5.3322711 8.4956372 11.7000191 9.7680890 NA 10.2094133 9.0607459 0.3025238 3.1783003 9.5948443 10.2959329 10.1179060 8.9523775 14.4926303 10.1125587 9.6659274 9.1322455 4.5755423 16.6857770 10.5936934 12.5205813 11.9513296 9.4188667 9.5840664 8.0947708 10.4197243 -0.00041585 -0.00041585 -0.00041585 0.00714090 0.00748970 0.00736090 0.20305000 0.00597000 0.00597000 0.00416320 0.00416320 0.02749700 -0.00083160 -0.00083160 0.17830000 3.65690000 0.65479000 0.00416320 0.00000000 -0.01312700 -0.01161100 0.00055459 0.01307400 0.01307400 0.01307400 0.01447000 0.01447000 -0.00277270 0.01488800 -0.00041585 -0.00041585 -0.00761010 0.00714090 0.00736090 0.00636400 0.20305000 0.20305000 0.00597000 0.00597000 0.00597000 -0.00277070 -0.00940460 0.00416320 -0.08519200 -0.08519200 -0.08519200 -0.08519200 -0.00083160 -0.00494980 0.17368000 -0.59195000 0.00416320 0.00000000 0.00152550 -0.01312700 -0.01161100 0.00055459 -0.59253000 0.01307400 0.01307400 0.20366000 0.01447000 -0.00277270 0.01488800 -0.00833230 -0.02329200 0.000 0.000 0.104 -0.488 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 -0.488 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8352034 11.5212877 4.5249162 9.1195064 4.4724488 10.2596248 3.5755423 1.8874863 8.1932937 7.3322702 -1.2824387 6.5715555 0.7175613 10.2243636 9.4292272 1.3025238 8.0236219 9.0304431 11.9758318 10.5321427 9.5573781 8.0121809 10.4653336 2.5249162 10.0372323 9.8692110 5.6364245 -1.2824387 10.6695734 2.6244519 12.1775040 12.0700175 7.2798028 10.6615401 8.2312879 9.1861843 4.2721501 1.3025238 0.3025238 6.4791109 9.2411220 9.1280116 10.2552640 4.7836505 6.9745706 6.5119756 10.6116200 6.7062446 9.8234687 NA 10.9330932 2.8050241 5.9843478 9.8675359 6.4581507 6.4791109 9.7012664 7.6862267 8.0662884 0.7175613 13.6440878 -0.2824387 10.1506239 NA 6.0662873 5.5249162 7.2371966 9.6085844 14.9580776 5.1438260 9.2807564 13.3926351 10.4590271 10.6059229 12.7026906 12.3806735 8.5200765 10.9767150 12.8273908 10.3230397 9.2013761 7.4923475 0.7175613 7.7863382 10.7568220 11.049877 7.201376 8.648298 8.842974 8.724588 10.222826 7.066288 6.118439 11.745639 5.984348 NA 5.857113 6.814539 10.580972 9.886859 8.737151 8.465753 12.867942 6.279802 11.502399 10.773859 11.853590 9.471613 10.463234 8.613893 NA 8.987236 9.239023 8.016768 11.410829 5.993686 10.941260 10.671757 6.836501 13.602255 10.310951 9.939751 12.702424 9.600967 9.425782 2.524916 TCGA-E2-A1L6 44 0 NA 1648 breast stage iia t1c n1mi m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 8.343418e-08 10.5623524 8.0611400 7.8493701 10.9712816 -0.6820014 10.5641354 1.7774092 10.2203637 11.7635208 8.4991407 9.9824359 7.7316164 9.1349722 8.7453015 7.7337306 9.6268965 10.4888526 9.9979085 7.5053408 2.2248738 10.9264744 9.5359462 13.2551325 10.9701613 9.7942285 10.3417430 4.4677360 10.9338481 NA 3.0728775 7.8118441 13.4360780 12.2862954 7.0560806 12.5529557 12.6420285 9.0636628 7.3458949 4.2721875 6.5274426 8.7124513 9.6421692 8.0762117 13.1301659 6.3347971 11.3457219 13.6593684 6.3732706 9.5768256 10.4176652 8.8058287 5.4265130 NA 13.6771709 10.8231054 4.7103050 7.2866557 -0.6820014 3.7442580 9.8759308 10.5087392 11.6977731 11.9082248 10.2590362 10.0552359 0.3179986 11.1184841 9.6628392 6.3179878 8.2837727 7.8474195 12.0382329 14.3315294 9.7562451 11.5285078 11.4868174 8.3527877 1.7774092 1.9029611 8.7473955 9.1814005 12.1013961 NA 4.4677360 6.8018041 10.5121299 11.3764878 10.5739024 7.3705566 4.2006299 10.6441371 12.0479279 0.6398804 13.5826511 6.4421091 7.9290134 13.1114395 11.5949853 12.9664586 8.5575870 10.4219321 11.1927779 10.8676313 11.0709964 5.0459103 8.3417430 12.0329853 10.3417430 0.3179986 10.2605031 8.9957084 1.3179986 3.9300466 10.2112902 10.7342584 10.2941947 9.3116346 14.9030832 9.8787990 9.8940004 9.7655884 3.7103050 16.5939812 9.9921808 13.2524627 12.1641646 9.8644008 9.4206205 8.1413556 10.0215029 0.0019418 0.4621200 0.4621200 -0.0096806 -0.0096806 -0.0128510 0.5107600 -0.0221950 -0.0221950 0.4218300 0.0391950 0.0413170 0.0024969 0.0024969 0.0000000 0.0000000 0.0000000 -0.0078863 -0.0078863 -0.0094046 0.0019418 0.0130740 0.0063871 0.0063871 0.0063871 0.0105640 0.0105640 0.0105640 0.0165650 0.0019418 0.0019418 -0.0102640 -0.0096806 -0.0128510 -0.0103700 -0.4897400 0.4236800 -0.0221950 -0.0221950 -0.0221950 -0.0099565 -0.0104180 -0.4775400 -0.4979800 0.0033299 0.0033299 0.0033299 0.0024969 0.0024969 0.0013868 0.0000000 -0.0078863 -0.0012473 -0.0012473 -0.0094046 0.0019418 0.0227250 -0.4949600 0.0063871 0.0063871 0.0037465 0.0105640 0.0105640 0.0165650 -0.0033243 0.0215960 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 8.7733159 12.3719993 5.9762009 10.0716232 2.3465598 10.3347969 2.7103050 0.6398804 8.2590361 7.6421694 NA 7.9588119 1.6399267 10.3347969 9.1556164 2.6399267 8.4536978 9.2211173 10.7076199 10.3981399 9.7383331 8.5323076 10.6191989 3.7103050 8.8503444 10.0552359 6.6489054 NA 9.5964380 4.0459060 12.9085172 12.2671770 7.8257831 10.4588183 8.2353609 8.9904140 5.2248776 2.1253535 1.1253205 2.2248738 8.6600633 9.1365708 10.7062751 4.9761986 8.3205785 6.2006319 10.2619685 6.1124041 9.7140581 NA 11.0770445 2.9029418 6.7103064 9.8303883 6.7349968 3.9618455 9.4317308 7.0009836 6.8376254 NA 13.9081663 0.6398804 9.9478006 NA 9.2590361 6.0661818 8.0287951 8.7987789 12.8765803 5.1634786 8.8474191 12.5529557 10.4619457 10.7552205 13.1301659 12.7571052 9.0501561 10.6351185 13.3290848 10.5228653 9.1814005 8.6068545 0.6398804 7.2457666 11.3725929 10.908342 7.043014 9.338969 8.682123 8.501624 10.152724 6.462646 6.688676 10.970161 5.603392 6.561163 8.985987 6.751532 11.035451 10.121313 8.372783 8.298128 12.003394 4.760934 11.697773 10.181013 11.454179 9.533522 10.429450 9.475967 NA 9.421139 7.000984 6.066182 11.376488 6.684311 10.624423 10.644137 6.849370 14.061140 10.323262 10.563541 12.910446 10.182175 10.062402 2.405448 TCGA-E2-A1L7 40 0 NA 834 breast stage iiia t2 n2 m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 7 white not hispanic or latino 117.51.0 NA NA 4 4 NA NA 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.446192e-06 1.946798e-07 10.78417317 6.48821131 8.27650271 11.29026542 1.54181217 10.27706697 -0.04319988 9.86146506 11.98922066 9.46363390 10.21303919 7.10148830 8.83947340 10.01211287 6.86372168 9.14665497 10.39614193 10.32969556 7.66763671 7.01752667 10.84671465 9.42239701 12.25932663 11.89328443 10.07901136 10.47055812 7.10148830 10.36303547 NA 2.27875794 8.58618714 11.04694295 13.22766819 7.34484802 10.91320665 11.66462101 9.30445195 7.10657760 3.41625876 5.78972143 8.18083212 9.02426482 7.89346839 12.31218160 4.41625876 10.57521598 12.30735538 6.36622078 10.04740615 11.26715929 6.96245532 7.81791739 NA 14.58324625 10.76216325 2.54178739 8.29668040 3.34915293 4.48039439 10.13860395 10.12173747 9.00259030 9.88682858 9.91900348 9.60698477 1.27875794 10.39510255 10.50517083 7.18083212 7.07577114 2.54178739 11.21126863 14.73133448 8.80035895 9.86071238 9.68899787 8.13425021 1.76417628 3.27875794 8.97919823 8.85467611 10.06077387 NA 5.08611287 6.38309599 11.12330743 10.87345642 8.53614656 7.18564953 5.34914940 8.84405103 12.26303464 3.04428919 12.91211714 5.89934484 7.80857940 12.68995177 13.08248612 12.83851807 6.43256361 10.28550545 11.62859267 11.25905246 11.84119183 5.12675402 8.65727021 12.92234427 11.54296660 -0.04319988 10.55488302 9.20238319 -1.04305123 4.60126269 9.58162598 11.53378715 10.61459556 9.24569649 14.28820235 10.48918646 10.61816330 8.16628412 6.38309599 15.32525171 10.40597917 11.81617116 12.00259016 10.34914796 10.00735937 8.09125659 10.16417433 0.1007400 0.1007400 -0.7736300 0.0705300 0.1733200 0.0269350 0.7596800 -0.7847900 0.7798400 -0.7498500 -0.7498500 1.3746000 0.0127950 0.0428740 0.1061400 0.0244080 0.0244080 -0.0842620 -0.2299400 0.0000000 0.0888370 1.0180000 -0.7297600 -0.7297600 0.0806010 0.0143300 -0.0537090 0.0758470 0.1219600 -0.2369200 0.1007400 -0.1026300 -0.6838700 0.0202030 -0.7630800 -0.8317100 0.4973500 -0.7847900 0.0172640 -0.0082047 -0.7662900 -0.7346800 -0.6618900 -0.7831100 0.0668680 0.7833100 -0.5856900 -0.7238500 -0.8407200 -1.1118000 -0.7580600 -0.0842620 -0.2142900 -0.7544400 0.0000000 -0.7526200 -0.5054600 -0.7296700 -0.7297600 -1.2929000 0.8345100 0.0369350 -0.2230700 -0.7706500 0.0200630 -0.0164290 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.730 -0.730 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.168 -0.168 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.730 -0.730 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.168 -0.168 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 9.08868755 12.46015937 5.10657864 10.31052872 4.28128281 10.66634518 3.34915293 -1.04305123 8.21657369 8.60608684 -0.04319988 7.90811516 4.97919766 11.20446141 9.75530238 5.44868295 8.87867140 9.44165341 10.05354568 10.00667910 9.72331793 7.82719533 10.43357668 1.95683728 8.07317435 9.60698477 3.04428919 NA 10.85656504 5.77700934 12.09973529 13.00710431 7.42850590 10.22068655 10.47892156 9.87046799 7.55674361 1.76417628 NA 7.72501513 8.83027466 10.36516027 8.80545337 4.34914586 7.96360532 6.75773002 9.84252682 7.58982564 9.69829750 NA 10.30223576 4.31438475 4.62925752 9.02834648 6.73372446 5.65727128 9.59073393 8.91972651 7.46462498 -0.04319988 13.56589378 0.95680012 10.43913430 NA 8.44868377 3.71171515 7.95118387 7.42850590 8.89282055 7.87867140 8.37045856 10.91320665 10.66892752 9.03631540 12.31218160 13.00096844 9.55565532 10.89273215 12.56566283 11.58253935 8.85467611 7.60788213 -0.04319988 7.72501513 9.76499032 11.307770 7.200004 8.833347 8.580712 7.578882 10.192228 7.691540 4.956833 11.893284 10.069922 -1.043051 9.307770 9.432007 9.620389 9.709211 6.984736 9.360908 9.930528 6.534259 9.002590 10.079011 10.689846 8.796034 11.266307 8.631023 2.657274 9.141768 10.014457 7.126755 10.873456 6.340536 10.630140 8.844051 8.067966 13.973204 10.370458 10.027622 11.679851 11.681984 9.891259 1.541812 TCGA-E2-A1L8 52 0 NA 1205 breast stage iia t2 n1a m0 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma no 2 black or african american not hispanic or latino 109.61.0 NA NA 3 2 NA NA 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.112456e-07 10.53386339 6.79634856 8.11827614 10.45942885 -1.56106846 11.21358313 1.24616483 9.97795488 11.20863394 6.61870558 10.47634300 7.98954266 7.91047125 8.60244574 7.66520799 10.16245704 9.60181665 10.29988295 7.45002349 2.76073192 10.34531088 9.82735160 10.62800291 10.51025839 9.75054437 10.78586372 5.18026325 10.93889105 1.02375214 1.24616483 8.83218653 10.06632993 12.69079619 8.33815295 12.53353359 14.11221558 9.22588247 5.05350672 1.89820835 6.49407794 8.80402483 10.83887497 7.50757426 13.39008080 1.43877190 11.71680986 14.29117928 3.72420277 9.80650016 9.92462533 9.22751439 8.05534481 0.02375214 13.06265642 8.19201263 1.24616483 6.08984768 NA 4.43879850 10.02234895 10.72188442 10.07542072 11.03568466 10.01716878 9.53155321 1.43877190 10.79497293 9.41464402 4.96235930 9.21440631 2.52626917 11.37414535 13.82189282 7.24981791 10.98327760 11.50337045 8.31837921 1.60871464 -1.56106846 9.48455567 9.07179136 11.87680818 0.02375214 6.89822770 7.23645722 9.78641748 12.71884185 5.34568733 6.00103882 4.02376101 10.43102638 12.04033476 3.93065219 13.64248819 8.60118728 8.35318124 12.29658273 13.27311899 13.12617177 8.45977586 9.43738652 11.63938819 11.37415638 10.61247322 4.27168712 9.14442857 12.27602978 12.76859242 0.43882511 10.56324052 8.71724561 -1.56106846 3.43970292 9.79028756 10.96211301 9.95449587 9.01811197 15.08528447 10.11739622 9.67660363 10.34531088 2.02375214 15.04664650 8.67600606 13.53551123 12.53303875 10.19326612 9.46601098 8.58727272 10.29682366 -0.3699700 0.7713700 0.7698300 0.0199230 0.0319990 -0.3536200 0.0565130 -0.3602200 -0.3602200 -0.8088100 -0.3564700 -0.3564700 0.0336430 0.0445740 -0.3585200 -0.3585200 -0.3585200 0.0171240 0.1423600 -0.3523600 0.0435820 -0.3829100 -0.3902900 0.0102850 0.0102850 0.0000000 0.0000000 0.0080567 0.0359470 -0.3699700 -0.3699700 0.0185230 0.0319990 -0.3620400 -0.3543000 0.0565130 0.0565130 -0.3602200 -0.3602200 -0.3602200 0.0414580 -0.3614700 -0.8088100 0.0444320 0.0444320 0.0444320 0.0253900 0.0445740 0.0445740 -0.3585200 -0.3587600 -0.8158900 0.1423600 0.1423600 -0.3523600 0.0435820 -0.3666900 -0.3858300 -0.3902900 0.0102850 0.4324300 0.0000000 0.0000000 0.0359470 -0.3649900 -0.3881700 0.000 0.000 -0.359 -0.359 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.432 0.432 0.000 0.000 0.401 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 0.000 0.000 -0.359 -0.359 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.432 0.432 0.000 0.000 0.401 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 9.27405708 12.32810991 9.26613882 9.72419834 3.08265150 9.98906192 0.43882511 NA 7.85453805 9.42392645 NA 8.14472196 3.60872646 10.39662362 9.23321197 0.02375214 11.10035150 9.42819056 8.04612650 10.05901586 9.06661261 8.13923566 11.24816229 1.89820835 9.28114647 9.53155321 1.76073192 NA 10.20739398 2.96236393 12.81979819 11.40530152 8.72304176 10.23361800 8.82357997 9.25417947 4.48319021 1.43877190 0.76068935 4.83111213 7.84393738 7.67720095 10.88070282 6.13228276 7.89422602 5.36953279 10.08850139 9.15046296 9.77195142 NA 11.65917440 0.76068935 4.96235930 9.86963533 6.30570428 5.13923618 9.37101078 6.60872055 6.83111339 NA 14.35775246 1.02375214 9.98713637 -1.56106846 8.97115208 5.74257757 9.02093800 8.57706773 12.001089 4.648247 8.510259 12.533534 10.049369 11.483361 13.390081 11.542903 8.708320 10.730830 14.133317 10.524932 9.071791 9.736286 NA 7.640920 11.744715 10.8203390 7.9002757 9.4493243 9.6831599 8.1633100 10.6378150 5.1392362 7.9485711 10.5102584 6.8311134 1.4387719 8.4667022 5.8767551 10.0745141 10.8513659 8.1920126 7.1322828 11.7615693 5.7963486 10.0754207 11.4089020 11.0783629 8.6961841 10.5690449 8.2003474 0.4388251 8.7157695 9.7630048 6.6914616 12.7188418 7.0048497 10.2838940 10.4310264 6.6137217 14.2058425 10.2307729 10.7573389 12.9827945 9.9180712 9.8305767 3.8982277 TCGA-E2-A1L9 40 0 NA 598 breast stage iia t1c n1mi m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 109.61.0 NA NA 2 2 NA NA 1 1 3 4 1 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.112456e-07 11.3238767 5.7448177 7.5047967 10.4750606 0.6931412 10.0968767 1.4301247 9.9992162 11.4901404 11.1673675 9.9062587 7.9785566 7.9315590 9.6574953 7.6608609 10.1099521 9.5521715 10.5925114 7.9739252 2.0150693 10.5228772 10.3136798 13.5898338 10.2203056 9.5223487 11.4258873 5.4210752 10.4905459 -1.8916428 0.6931412 8.9339458 11.3583424 12.5304539 8.8630796 12.3328720 12.3746857 9.3935942 7.0565597 3.3176514 7.0797354 8.4222086 7.4391086 8.3501750 12.8988459 0.6931412 11.0721718 14.1858005 3.4657394 10.1367888 10.6889217 7.7357259 8.3370108 0.6931412 13.1245598 7.1503982 2.6931635 6.7081044 NA 4.1956547 9.0746976 10.4772440 10.1099521 11.2644331 10.0940340 10.0933223 1.5676428 10.5454239 9.3691116 6.0030107 8.9800973 11.7636109 11.4683532 15.2715370 9.1597001 11.1392039 10.9893059 8.1702381 2.1081899 3.3935947 8.7619328 8.6521903 11.7711941 -0.8919105 7.9646175 7.1525860 9.4837745 11.5884773 7.6376226 6.9123229 5.3078656 10.6938587 11.8260826 1.5676428 13.8641749 6.9251758 7.1110073 12.7051388 13.2190015 12.9732003 7.7339007 9.6337127 11.2050718 10.4865275 10.8732708 3.6931524 8.8471288 11.8400413 10.3658745 -1.8916428 10.5194381 9.0667447 -1.8916428 2.5832784 9.9564236 11.2303729 10.5727377 9.4329352 15.0286612 9.8198589 9.6656557 8.5058667 3.0623808 15.5678237 10.0652940 13.5843370 11.3990748 10.1367888 9.7872321 8.0811718 10.0020168 -0.034904 1.006100 1.006100 -0.026714 -0.023977 0.654980 0.128300 -0.028043 -0.028043 -0.026749 -0.026749 -0.024251 -0.031632 -0.031632 -0.031905 -0.034086 -0.034086 0.000000 0.000000 0.129480 0.129330 0.028750 -0.046592 -0.046592 -0.045425 -0.047395 -0.047395 -0.047395 0.114330 -0.034904 -0.034904 0.060936 -0.026714 -0.027124 -0.018765 0.128300 0.128300 -0.028043 -0.028043 -0.033030 0.140580 0.140580 -0.026749 0.478900 0.478900 0.478900 0.478900 -0.031632 -0.031632 -0.031905 -0.034086 0.000000 0.000000 0.000000 0.129480 0.108580 0.032845 -0.054960 -0.046592 -0.046592 -0.031086 -0.047395 -0.047395 0.114330 0.121960 -0.050370 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 8.76640335 14.03086931 8.02556428 10.27152722 -0.05994604 11.11609530 0.43007113 NA 8.22063129 8.49081599 -1.89164282 8.92113935 3.19566256 10.65219041 8.90179521 0.69314123 8.04777121 9.29678088 7.95837871 9.71967802 9.34963884 7.29306695 11.27419811 3.50050890 7.82415430 10.09332235 4.75204741 NA 10.27780393 3.53446008 12.67430552 12.23699190 8.23876250 10.28124444 10.23618632 9.40166374 4.95368430 2.43012467 0.10822334 -0.30685877 7.61994483 7.81555109 8.88791148 4.37497686 8.12568261 4.82243954 10.41254328 6.00301074 9.36911157 NA 9.89446159 2.80863217 4.44804195 9.97296629 7.00270702 1.91555914 9.32493793 7.91232292 7.02108102 1.27810373 13.88375085 0.43007113 10.40968814 NA 8.70158302 5.57579638 8.09829585 8.83014565 12.637121 5.430121 9.817707 12.332872 10.628074 11.068737 12.898846 11.888424 9.344206 10.319776 13.435499 8.815551 8.652190 8.496209 1.693141 7.792941 10.623892 11.3781952 7.3103156 9.5495800 8.7655105 8.2918273 10.8747665 5.9473950 9.1423031 10.2203056 6.7118184 2.4301247 5.8155524 6.9761815 11.6851487 10.5368139 8.8580615 7.8429015 10.2933772 4.7664043 10.1099521 10.8120955 10.3799468 9.8003716 10.9468050 8.9315593 0.9155591 9.5696151 7.5234898 3.5676185 11.5884773 9.0455658 11.1077411 10.6938587 7.1110073 13.7914608 10.3688176 10.6851487 13.1782291 10.4905459 9.8730635 2.1081899 TCGA-E2-A1LA 59 0 NA 748 breast stage iia t1c n1a m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 1 NA not hispanic or latino 117.51.0 NA NA 1 5 NA NA 1 1 3 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.873276e-06 6.938058e-07 10.7638454 3.5868848 6.3318449 11.1936696 NA 10.4494674 -1.1681228 8.7008225 10.5667095 9.3348317 9.1174021 7.2666282 8.1380613 9.4604455 8.1104494 8.8488082 8.9830164 9.9300319 6.9868182 5.5462463 9.8064144 10.5276632 13.5429139 11.5703033 8.6759211 10.4713406 8.0487457 10.5671031 NA 1.4169478 7.6868682 10.6513807 13.0177271 7.2456278 13.3651471 12.8884682 10.1168240 5.4467095 0.4169478 7.8235220 8.5582179 8.9625704 7.4830515 13.1659938 2.2914267 11.2328793 14.0499576 4.7146412 9.8819029 10.9577362 7.4169622 8.4540517 2.5324416 14.0036188 11.3557750 2.0019103 6.6067872 NA 6.4018557 8.6489834 9.6680501 9.1707363 10.4457894 9.3663028 10.1087060 2.2914267 10.2909191 9.9088155 3.8319988 7.6329000 2.2914267 11.7898275 14.6396315 6.6493668 10.2248539 10.5397903 9.7664279 2.5324416 -1.1681228 8.0193522 8.7818265 10.7100508 -0.1679607 6.2243182 7.4132006 9.9114847 10.8390271 7.0608180 6.7207436 5.3711581 9.8404285 11.6515803 5.4902107 13.5379562 6.2914323 7.5359036 11.4377109 12.7470389 12.4335386 8.8418285 10.3880269 10.9515895 10.3092521 9.6190861 2.5324416 8.0438880 12.2363432 11.4487784 NA 10.2189401 8.6617225 1.1539350 3.3655666 9.1011266 10.3774471 10.2687115 8.6521788 15.1406766 10.6166348 9.6084330 8.6505822 1.1539350 15.5027806 7.7358816 11.8818484 10.9950205 9.4785585 9.4713405 7.9168080 10.2721112 0.02525000 0.60430000 0.00249690 -0.44232000 0.54630000 0.17784000 0.07182200 0.00000000 -0.53053000 0.01642500 0.01642500 1.06950000 0.00013863 0.01391100 -0.13755000 0.46707000 -0.55506000 -0.53378000 0.11038000 0.05722600 0.01782400 1.46650000 -0.54391000 0.49286000 0.49286000 -0.05591900 -0.02562000 -0.02562000 0.07843800 -0.56087000 -0.53073000 -0.02985700 0.02525000 0.05010800 -0.14618000 0.07182200 -0.51373000 0.00000000 -0.53053000 -0.53744000 -0.01367700 0.01293400 -0.53885000 -0.53510000 -0.53510000 0.00194180 0.00194180 0.01391100 0.01391100 0.45990000 -0.51589000 -0.14989000 0.11038000 0.01964300 -0.52010000 -0.54472000 0.38816000 -0.49996000 -0.54391000 0.49286000 -0.06741400 -0.05591900 -0.02562000 0.07843800 -0.04420700 -0.01931400 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 0.000 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 0.000 9.3107695 13.0225191 6.6712042 9.6923109 4.7945510 10.7445150 2.4169748 0.8320393 8.7023646 9.0426711 -1.1681228 7.2623270 4.5868848 10.4722448 9.2026873 4.9405239 7.3437525 8.4848450 9.0267566 11.5438819 8.7322478 7.0893880 9.8121394 0.8320393 8.4704356 10.1087060 0.4169478 1.1539350 11.5337395 1.1539350 12.5840669 11.7215038 7.3198401 9.5513887 8.3178291 9.8578316 3.9612807 2.2914267 0.4169478 1.4169478 9.0181142 10.9561212 10.9031270 3.3555661 8.1422720 6.9300324 10.5136776 4.9817476 10.4897649 -0.1679607 10.6731711 2.1539350 3.5324416 9.5919213 7.1451547 7.3942423 8.3750316 8.1651552 10.0365711 -1.1681228 13.9499270 0.8320393 10.3082398 -1.1681228 8.4740515 3.0019283 8.2456278 8.6992785 13.9871711 5.8092807 9.3457275 13.3651471 10.4821541 10.0882085 13.1659938 14.2042188 8.1403390 9.4955581 13.0732383 11.9197942 8.7818265 8.2975661 0.4169478 7.9766581 10.9444394 10.808922 7.327855 9.160675 9.395196 9.016875 9.769182 7.461357 5.831999 11.570303 7.546245 -1.168123 4.854370 7.304366 9.713114 10.582707 8.133496 10.136922 10.419777 7.528967 9.170736 10.503541 10.407539 9.105795 10.420714 7.108124 NA 8.165468 7.065620 8.361431 10.839027 6.249853 10.882869 9.840428 7.056918 13.200779 10.133496 10.231812 12.236742 10.672384 9.592720 2.738898 TCGA-E2-A1LB 41 0 NA 1231 breast stage iib t2 n1 m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 2 black or african american not hispanic or latino 117.51.0 NA NA 2 4 NA NA 1 6 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.230962e-07 2.224912e-07 12.8910415 4.1676389 7.4002971 11.2574842 -1.1542490 9.3305313 NA 10.3795248 11.3897069 6.5391960 9.3848673 7.4117626 7.6138926 10.0168853 4.3051388 9.9929134 9.1089776 9.5980892 6.9542324 -1.1542490 9.4777949 10.2989791 14.5811587 10.2256283 9.3858365 10.7435539 4.4002988 10.2481877 0.4307135 0.4307135 7.8541372 11.6793892 12.4368708 7.6785987 17.8751763 12.5497201 9.5154793 6.1124958 2.3051534 5.8343927 8.2927919 6.0055796 6.8625171 13.0798523 -1.1542490 9.4659284 10.5365794 -0.1542490 10.0056302 11.0639689 8.6352422 8.7191526 0.8456707 12.9256015 10.7409051 1.1676148 7.6594893 -1.1542490 4.1311120 10.3076993 9.7122147 9.8770651 9.9364825 10.2396352 9.8825689 -1.1542490 10.2672474 9.7229926 3.9749881 7.7645717 12.3353056 9.4165130 14.5923540 8.8946993 11.2103903 9.8336830 6.9646493 3.3051388 2.0156403 8.6221415 8.3051402 11.8763756 NA 8.0936357 6.8057103 7.9009912 10.7149167 5.9225238 4.9542335 4.7999058 10.0715184 11.5498282 1.6530600 13.3537508 5.7160745 6.6530629 11.3480430 13.5588801 12.6209072 6.3926025 10.3804976 10.7233760 9.2319481 10.5491795 4.2380225 9.1287968 11.4601883 9.3712293 NA 10.0799271 8.9037002 -1.1542490 2.4318636 10.0287234 11.2323793 10.0870958 8.5163647 15.7440973 9.3234667 9.4278504 7.0983743 3.1676309 14.2895909 9.8421819 12.3014209 11.2010595 9.9285228 9.3395639 8.5322090 9.8316358 -0.00185890 -0.00185890 0.00930980 0.00624810 0.00903120 -0.00097017 0.00750000 0.03242200 0.04230700 0.04103400 -0.61508000 0.02356600 0.00249690 0.00235810 0.00597000 0.00597000 0.00597000 -0.00429290 -0.00429290 0.01419000 0.02988800 -0.00069303 0.00221930 3.65690000 0.05840300 -0.03927600 -0.01610400 -0.01560400 0.00638710 -0.00185890 -0.00185890 -0.00110870 0.00027728 -0.03993700 -0.00097017 0.00347070 0.00027728 0.03242200 0.04230700 -0.66901000 0.01140000 -0.64462000 -0.64123000 -0.64236000 -1.29290000 -0.63937000 -0.00380370 0.00235810 -0.67417000 -0.00995650 0.00597000 -0.00429290 -0.00429290 0.59732000 0.01419000 0.02034600 -0.66346000 0.00763920 0.00221930 -0.63680000 -0.01680300 -0.03927600 -0.01610400 0.00638710 -0.00595220 -0.02999400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 7.6785987 13.0963030 4.5181322 8.7374921 2.5670830 10.8825689 -0.1542490 NA 7.9568442 6.9171704 NA 7.0648775 0.8456707 11.0386177 9.3183993 0.4307135 6.7160731 8.9278574 8.2010594 11.7465752 9.9364362 7.9036999 10.7098946 1.1676148 7.4530385 9.8825689 6.2294130 NA 12.1829122 2.8457108 12.7190564 13.4879858 7.3653443 10.3746509 8.6022646 9.5348328 5.8343927 2.6530600 NA 3.3692710 9.2603936 10.7597198 9.2855393 3.0936278 10.4013569 7.5736290 10.3224547 5.7999058 9.8975971 NA 10.5500444 3.2380225 4.0936362 9.3357771 7.0176358 4.6530658 8.2907234 7.4895646 7.5003448 3.9749881 14.1825288 0.4307135 10.7738567 NA 9.2845003 4.2380225 7.8791317 8.8708480 12.443977 6.194436 9.452114 17.875176 10.798814 11.236146 13.079852 11.113080 9.252976 10.475976 13.068051 8.138030 8.305140 6.697457 NA 8.498553 10.632795 11.166791 5.943741 9.113666 9.129954 7.369270 10.312285 6.518134 8.892832 10.225628 4.131112 NA 3.015640 6.988122 11.363132 10.832617 8.868076 9.589701 9.154047 5.691199 9.877065 10.186115 9.580418 9.024373 10.462717 8.549612 NA 9.973064 8.496778 5.716075 10.714917 7.848523 10.103945 10.071518 7.557134 13.738204 10.596415 11.173261 12.163545 10.617198 9.220748 2.305153 TCGA-E2-A1LE 71 1 879 NA breast stage iiic t2 n3a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 27 white not hispanic or latino 185.42.0 NA NA 1 3 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.362758e-06 3.337367e-07 11.7039421 7.0865747 6.2113569 11.1903365 -0.2399068 8.7288120 NA 9.4192492 11.3371019 7.2399259 9.2579971 7.0222402 8.5032967 10.1652868 4.3147328 10.2098099 9.8106741 10.2082616 7.5898683 5.0269328 11.2175262 11.5146152 14.2362269 9.9244237 9.2287694 10.6366622 7.8099938 10.0187114 0.3450557 0.3450557 8.4623178 11.1843115 12.1241376 8.0865747 17.4757917 11.4618849 10.6628972 6.0639257 1.3451125 7.1220887 8.1286517 5.5283306 7.5898683 11.5474357 NA 11.3651617 11.3586631 5.9300702 9.4221371 10.8505886 8.7374252 6.2679402 -1.2399068 13.6487492 10.3977528 2.5674968 9.0988817 NA 4.6181270 8.5977732 9.4812444 8.8262345 11.0368513 9.6938359 10.1022200 1.7601358 10.4518888 9.6647799 6.1088736 8.5723224 11.7643657 10.0104436 14.8413790 6.5570930 9.8038562 11.6504096 11.0938597 2.3451125 8.3469852 7.9720338 8.0977672 12.6001363 1.3451125 6.6366623 6.9400540 8.9400543 10.7562657 6.5216962 6.3300008 4.6427882 10.5902643 11.7063205 2.4605853 13.1313774 4.7374272 6.8369605 11.7731189 13.7228606 12.6449836 8.0843258 10.5870909 10.2056774 9.3985812 10.5767289 3.8045389 8.9949626 11.4323496 9.4923127 -1.2399068 10.0977672 8.7488298 1.7601358 2.6708856 8.9350710 11.1845740 9.6945733 8.5914524 14.8916405 9.7417125 9.1121887 8.0269317 1.7601358 12.8257297 8.3949565 12.9545943 12.2547509 9.4120939 10.4352202 7.2560001 9.7459872 0.5208300 0.0029133 -0.6041300 1.0272000 -0.0209610 -0.0051227 0.0384890 -0.0042929 -0.5352000 -0.5306400 -0.5306400 0.9657600 0.0048579 0.0098669 -0.5263400 0.0065342 -0.0038779 0.0390540 -0.0022168 0.1052600 -0.5290000 -0.5376600 0.0304510 3.6569000 -0.0099565 0.5308100 -0.5109400 0.0081959 0.0207630 0.0219790 -0.0030475 0.4432500 -0.5362200 0.0239870 2.1416000 -0.0181080 -0.0223320 -0.0042929 -0.5411800 -0.5466300 0.5535400 -0.0161540 -0.5156800 -0.5190700 -0.5114600 0.0130740 1.1029000 -0.0085704 0.0158660 -0.5512600 0.5410100 -0.0100940 0.0058309 0.0084743 0.0589990 -0.5390600 0.5514200 0.0555150 -0.5087700 -0.5095000 -0.5255300 0.5818400 -0.0310860 0.0383470 0.5159400 -0.5177400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 9.1748306 13.7252080 2.2195867 9.9567474 4.4100493 12.5108522 1.5674968 -0.2399068 9.3554029 8.2619825 NA 7.7162893 5.9598165 11.3842553 9.3803652 0.3450557 9.1055505 9.0513161 9.9092572 10.5610452 9.0848097 7.1438495 12.3821971 2.5674968 7.6458414 10.1022200 4.5675029 -1.2399068 10.6154031 3.6181212 13.2049014 13.0278830 8.3895019 9.2439611 8.5898680 9.9231660 3.4605853 3.3451125 1.0820894 3.4605853 9.4076036 10.2604892 10.1460077 6.2195771 10.4168695 9.2103255 9.5946163 6.0175322 9.0513161 0.3450557 10.7399277 3.6181212 4.9098931 9.6607479 5.9004128 3.3451125 9.7143415 9.1642224 5.2993033 2.2195867 13.8347049 3.0820724 11.0848884 NA 8.7172473 7.1779975 7.6967833 9.4999258 11.6491890 6.9647163 9.3646985 17.4757917 10.4670729 10.4897660 11.5474357 9.3366295 9.5787274 10.0679154 12.5805237 8.9622691 8.0977672 7.1905981 -0.2399068 7.4183569 11.0131063 12.007479 7.283707 9.760145 9.476965 8.017604 11.240938 7.922537 8.854223 9.924424 8.113292 -1.239907 7.754499 8.455600 11.928661 11.015469 7.303177 9.878438 8.068484 5.988964 8.826234 9.914330 9.587488 10.805222 11.376005 7.981732 9.330950 10.386995 7.532922 5.360059 10.756266 7.580324 12.161825 10.590264 7.271898 13.967693 10.326675 10.482953 11.759793 12.657424 10.078688 1.930056 TCGA-E2-A1LG 50 0 NA 574 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 black or african american not hispanic or latino 124.53.0 NA NA 5 1 NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 2.419591e-06 7.78719e-07 10.8700731 4.3629888 6.7105268 11.2281909 NA 10.5260185 3.9693255 10.8355733 10.8949518 8.9728563 9.4799142 6.7967457 7.3683615 10.0320322 4.9973376 9.8165356 10.2231953 10.6092150 9.6023912 0.8818995 9.2239365 10.9439079 9.9285311 11.2148308 10.8039506 11.1110812 5.0517854 11.3291104 6.2452675 0.2968979 9.0856177 10.4119430 13.5222950 7.6522506 13.2472274 12.5559805 9.4836326 2.6892097 -1.7032196 6.4054240 7.9116089 7.7522268 5.8818628 1.7563402 NA 8.1610855 7.2968997 7.4842517 8.9262560 11.4013343 4.8046938 5.7887536 1.9973285 14.9747264 10.9355615 -1.7032196 9.7827286 NA 3.6892209 9.3025238 11.1730325 8.4755640 11.3871772 9.0872477 9.4421946 2.8204649 10.9798939 10.0307620 4.7563295 7.6367493 -1.7032196 9.5589942 14.2651161 6.6129540 10.9984224 11.2503682 10.8759795 2.2037963 -1.7032196 7.6956431 9.4093387 12.3390716 -1.7032196 3.3843676 6.7807156 11.5273701 10.8440349 2.6188260 6.2798928 3.8204649 7.2127785 12.4377291 0.2968979 13.8258417 3.4668229 5.9693255 12.4745524 11.6917639 13.3118351 4.3629888 10.3978901 11.4098274 11.1825957 10.5486775 4.1297858 8.5730238 11.7416554 11.8448783 4.1795429 8.9816480 8.4210204 6.3358191 2.4692348 10.4135682 11.3301502 11.3727127 9.0179984 14.7140596 9.8639047 9.0179984 6.5730230 -0.7029847 12.6742454 12.4514801 14.2328700 10.8157983 9.5507468 9.0945607 8.2335372 10.0480626 -0.49113000 0.36571000 0.40925000 0.44102000 0.44102000 -0.49257000 0.46363000 0.39099000 -0.43790000 2.01860000 2.01860000 1.55160000 -0.48787000 -0.48787000 -0.00652360 -0.00652360 -0.00652360 -0.01355800 -0.01355800 1.57330000 0.37707000 0.03917600 -0.49508000 -0.00056727 -0.00056727 1.33360000 0.35183000 0.35183000 -0.01252800 -0.49855000 -0.49113000 -0.01499200 0.44102000 -0.49257000 -0.48514000 0.40692000 0.40692000 0.42181000 -0.43790000 -0.43790000 0.00136810 0.00136810 -1.05190000 0.01291500 0.00775960 0.00775960 -0.00517010 -0.48787000 -0.50379000 -0.00652360 -0.00652360 -0.01355800 -0.01355800 -0.49017000 -0.97068000 0.37707000 0.03917600 -0.48828000 -0.49508000 -0.00056727 0.00000000 -1.01370000 0.35183000 -0.03886800 -0.04646600 0.42837000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.495 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.000 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 -0.047 -0.438 0.000 0.000 -0.482 -0.482 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.495 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.000 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 -0.047 -0.438 0.000 0.000 -0.482 -0.482 0.000 0.000 0.000 6.8007252 12.4828587 6.4867240 7.4618060 2.9407494 9.1780132 -0.7029847 1.1042696 7.9189509 13.8931473 6.9693244 7.4542466 7.3683615 10.5299197 10.6969782 1.9973285 2.1042696 9.5507468 9.3412933 9.6378620 8.1417776 8.1977661 10.1490387 NA 10.7547932 9.4421946 NA NA 10.1867834 2.4668359 13.4027669 12.0816364 6.8476462 10.1791602 9.7547932 10.1364968 2.4668359 1.8818604 -1.7032196 7.7624658 10.2877124 9.6762776 7.1266219 3.2968979 7.8656535 6.6367493 10.3354754 8.3670202 10.2866485 NA 14.9280337 0.6188025 5.0782597 10.1085671 7.0777344 5.5257181 6.4364500 7.6784424 8.3330730 8.6478387 14.2679039 -1.7032196 9.7897539 NA 7.9710917 3.4261842 7.3949317 8.7377685 13.457745 7.530519 8.048443 13.247227 12.347870 12.100627 1.756340 9.390977 9.325496 10.552518 13.821716 11.793628 9.409339 4.618826 1.104270 7.885614 10.934203 9.837996 7.920781 8.428756 8.769590 9.045092 10.451863 5.011147 2.881860 11.214831 10.378383 NA 6.710527 7.753418 11.251823 10.292313 9.329634 8.557819 9.013719 5.843793 8.475564 11.397890 12.177439 10.421021 10.753254 10.101030 9.581723 9.636888 7.605944 7.413243 10.844035 7.549564 11.145718 7.212778 7.501470 14.124639 11.032667 12.593600 12.694373 8.785744 9.334446 2.296898 TCGA-E2-A1LH 59 0 NA 3247 breast stage i t1c n0 m0 2-10-2014 female 2002 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 120.48.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3.850622e-06 8.672572e-07 11.6899447 4.9116149 7.2335430 10.8154194 0.6262055 10.1419125 1.6262055 8.5539905 9.8705765 9.4732700 9.3214409 8.3473118 7.5210303 10.1240644 9.1280498 9.4351768 9.1300384 10.4701337 9.3558334 6.9208328 12.4543491 13.1223174 13.1706941 10.5753098 9.7490406 9.8344470 8.9682872 8.9046620 8.0608407 1.9481523 8.0185301 9.9705086 12.2644222 6.7347367 12.2774886 12.5836775 11.0007088 7.6923016 0.6262055 6.0356041 8.6678719 9.9139250 5.9116149 5.7554965 NA 12.3201351 7.9116149 4.8356664 10.3845857 10.5687271 7.6814949 6.3541330 1.2111991 14.5076464 10.5420920 2.7961409 8.4206285 NA 7.2261251 6.9481406 10.4803018 8.9093009 9.4511713 8.4075724 10.7930033 3.4335738 9.6692399 10.7163250 6.8160377 7.3335713 2.6262055 6.4841929 15.3035469 7.2453321 10.0794832 9.6374398 10.5331032 3.5331023 -0.3737011 8.3507266 8.2736711 9.6746995 1.2111991 4.5804108 8.5716563 9.8658112 10.3558334 5.9116149 7.2186698 4.6706081 9.5195142 11.3344344 2.6262055 13.1885743 3.8741379 6.5569505 12.4804966 14.2906043 13.0443287 7.3676795 10.9305639 10.9196843 9.7683197 10.4383900 3.2111680 8.5240582 11.1658561 8.5833145 2.6262055 10.2646486 9.2149272 3.4335738 3.6262172 9.7360433 11.3511527 9.5934389 9.3977020 15.3279252 9.8048775 9.6077799 6.3127124 0.6262055 13.0288250 5.6262113 11.9113258 11.1764784 9.1260586 9.5789538 6.6034928 9.6623862 0.2364300 0.6912900 0.4585400 -0.0282910 -0.1163900 -0.1524700 0.2769500 0.0073609 1.8240000 -0.4271300 -0.1560500 0.9946800 0.6642000 -0.1485800 -0.1212100 0.3386900 0.0178240 0.3246300 -0.1557400 0.6419400 0.3739700 0.4064400 0.0000000 0.0000000 0.0000000 -0.0839970 -0.0839970 -0.0839970 0.4307500 -0.0125760 0.2364300 -0.1626800 -0.1458000 -0.4338700 -0.4304500 -0.1531100 -0.1531100 0.0073609 0.2939000 -0.2063500 -0.0610880 0.1795000 -0.0754780 -0.1582200 -0.1582200 0.1544200 -0.1491300 -0.1485800 -0.1473400 -0.1987500 0.0178240 0.3246300 -0.1557400 -0.1557400 0.0013868 -0.1555400 -0.1270700 -0.1954400 -0.1504200 0.0000000 -0.1724600 -0.0839970 -0.0839970 -0.4546900 0.4669000 0.4285600 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.156 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.136 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.732 -0.158 -0.158 -0.050 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.156 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.136 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.732 -0.158 -0.158 -0.050 9.8929992 13.7025272 1.6262055 9.1399401 4.9116149 12.3950172 5.2409210 6.2700692 9.1100283 8.5480536 3.5331023 7.8550310 3.0856456 10.8471954 9.4479866 4.9116149 9.0249562 10.9173833 6.7759592 9.4575198 7.0433051 6.4335671 11.3477391 1.2111991 9.0897370 10.7930033 5.8741404 NA 10.6733366 3.0856456 13.4139112 13.3291428 7.6205659 9.9231288 9.9104584 9.6402330 3.7961409 3.6262172 NA 0.6262055 8.5745799 11.5539905 7.3943967 4.2111758 9.2524691 8.0012522 9.1960682 5.8550304 10.0408979 1.9481523 11.5327275 2.6262055 5.1180648 9.4526817 7.9452524 8.8307836 8.9093009 8.5833145 11.1295415 3.7136738 13.9408667 -0.3737011 10.2637431 NA 9.5285877 4.9481429 7.8011386 7.7242444 12.456217 5.670608 8.597756 12.277489 9.708362 10.603493 5.755497 11.578954 8.295098 10.054573 13.047752 9.539102 8.273671 8.251922 1.626205 7.845381 11.104477 10.176959 3.626217 8.773417 8.401000 7.916231 9.455650 8.326652 6.692302 10.575310 7.196068 NA 9.589109 8.649274 10.887132 10.724245 7.394397 9.882421 5.966064 9.266457 8.909301 10.418189 11.141912 10.756783 10.215864 7.407572 NA 9.430602 7.920833 9.957129 10.355833 5.149776 11.208355 9.519514 7.234578 13.976185 10.847800 10.916231 12.123066 11.294654 8.913925 4.580411 TCGA-E2-A1LI 57 0 NA 3121 breast stage iib t2 n1 m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 136.49.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 5.562279e-08 11.6175260 2.4352819 6.4150910 11.1287565 -1.7345631 10.3494886 NA 9.0260644 11.4767766 9.6452643 9.6001764 9.2800625 8.4252159 9.5736835 8.5530571 8.6757958 8.7298902 10.9783014 9.0990253 1.2653169 10.5768091 12.2666648 13.0372982 11.1241027 10.2188135 10.8356746 6.0791263 11.2584599 4.1960798 4.4551694 7.3868782 11.5844522 12.3380634 4.9377681 12.4316646 12.1635680 10.7476484 4.5691265 -0.7345631 8.8837302 8.7278470 9.9778716 5.0068097 5.7967249 NA 11.9090881 9.1256558 7.1418619 9.7303497 11.3004873 6.6957976 7.7967262 1.4352552 14.2980107 9.2646399 0.5872690 8.3581017 0.5872690 5.0726975 8.6576622 10.6237210 9.5432132 9.4796637 9.9653507 10.2737732 1.0727232 11.0116490 10.5165311 4.5132697 7.7631964 3.3097437 7.8855646 15.0929106 8.8688874 10.9789459 10.1729864 10.2932506 2.3528150 -1.7345631 8.1295308 9.5940194 10.1291436 -1.7345631 3.5132760 6.5507468 11.2140768 10.0722969 3.3097437 6.5962613 6.6916095 8.3894657 12.1621500 -0.7345631 13.9832619 4.1960798 6.7691701 10.3243509 12.6722139 12.9267330 7.9110030 11.8900258 11.3569452 10.7411058 11.4111175 3.5132760 8.0368341 12.2774453 7.9001555 5.0467050 10.0650309 10.8972037 2.0726889 4.1727195 10.4820905 12.1366723 11.3496547 9.0310450 14.9464457 10.2111541 10.7810444 7.3581017 -1.7345631 12.7777764 5.2765711 12.3414921 12.2656087 10.0322875 9.5765252 7.5414692 10.4055480 0.1557700 1.3219000 0.7638900 0.0721090 0.1266800 -0.1930800 0.1563600 0.8566000 0.0803120 -0.3820100 1.2389000 0.8643300 1.2423000 0.6629000 -0.3245100 0.0079845 0.0079845 0.1188800 -0.2539400 0.5424900 -0.2713500 1.0126000 -0.1242100 -0.0631660 -0.0631660 -0.0131270 -0.0131270 -0.0603450 0.2129900 0.1557700 0.1557700 -0.1017100 0.1266800 0.1644500 -0.2172000 -0.3065100 -0.2976800 0.8566000 0.0803120 -0.4815500 0.3370700 0.0010663 -0.3775700 0.2044200 0.1977100 -0.2534600 -0.2534600 -0.1869700 -0.1869700 -0.3245100 0.0079845 0.1188800 -0.2539400 -0.2539400 0.0353830 -0.2713500 -0.4855900 -0.0120240 -0.1242100 -0.0631660 -0.1145500 -0.0131270 -0.0131270 0.2154500 -0.0866510 -0.2420400 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 7.8928785 12.4823177 2.4352819 8.7309109 3.5132760 12.7755524 2.8502994 4.9235581 9.2890990 6.4252159 6.3997710 7.7370195 5.2877124 10.9123532 9.3797377 4.3097364 7.4100027 11.7094536 5.7810449 8.8418288 9.7754411 7.1752372 10.9335647 1.5872690 9.0982345 10.2737732 4.9518442 NA 10.6395690 2.5132633 13.0156328 12.4592549 9.5895251 10.4956653 11.6220716 9.4594857 3.2653469 2.3528150 -1.7345631 0.8503194 8.7501673 8.9570881 7.0791253 1.2653169 8.3554969 7.9709767 10.2593444 5.6228952 9.9885789 3.5507529 12.0837270 1.2653169 5.7967249 10.0910984 6.2604905 6.4747978 8.6926573 7.5484328 8.5940196 3.7247812 13.7413313 2.5132633 10.5135686 0.8503194 9.5536339 8.5940196 8.4327628 8.0966519 8.871083 8.896522 8.270969 12.431665 10.819694 11.527880 5.796725 12.234191 8.540305 10.765938 13.745945 11.363048 9.594019 8.311104 3.072706 8.622897 11.609224 10.242625 8.413821 9.699973 8.763196 9.369288 10.238708 5.691610 6.712428 11.124103 10.563980 NA 9.032701 9.463213 12.124394 10.208958 8.123326 7.794775 7.437772 7.689511 9.543213 9.998784 11.351315 10.764692 10.693181 9.050797 NA 9.823531 8.718235 8.216629 10.072297 6.196082 10.662217 8.389466 7.921770 14.750262 10.502256 10.793066 12.672147 11.227518 9.081528 3.020235 TCGA-E2-A1LK 84 1 266 NA breast stage iiic t4b n3a m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 11 black or african american not hispanic or latino 120.48.0 NA NA 5 1 NA NA 2 5 1 6 2 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 3.615481e-07 11.6472201 NA 4.4791400 11.3262817 0.8161491 9.7577137 -0.7688134 7.7069477 11.0465977 9.2027578 9.3579188 7.5212329 8.3604973 9.5677209 8.2084943 7.5531424 9.7800363 9.7819611 9.2041940 0.8161491 10.7074543 12.4383813 13.4577771 9.5166166 10.1523115 9.7557560 2.8161696 10.2500683 8.4886022 2.5531393 5.4011389 10.0814011 12.6707856 4.2756105 12.9215398 11.5143027 11.6926938 6.8385447 3.8750723 9.5440974 8.1619517 11.5438137 3.9316547 3.6906406 NA 11.3465832 7.6658425 8.0577627 9.6710453 11.6914143 7.3656409 5.9177158 -0.7688134 13.9551104 9.6170768 5.3397396 7.4791416 NA 1.8161901 8.7210623 9.2756084 9.8320564 8.4185665 8.8180542 9.8696503 5.4600315 10.0457968 11.1744618 4.2312173 6.9523138 0.8161491 7.3026764 14.4982205 8.3177486 11.3872974 10.9890210 8.2027581 1.5531639 NA 6.7625960 8.8532662 9.0641044 NA 4.7547753 7.8495996 8.8236714 7.0891952 0.8161491 5.2756068 3.9861014 8.9177149 11.3292465 3.9861014 13.3152753 5.7703745 6.6490664 12.0142126 13.6677307 11.7740044 6.2864968 10.5229606 10.5827058 9.9264426 10.5480615 4.2312173 7.8199287 11.2167006 11.0597476 -0.7688134 10.5793892 11.2660133 5.4210381 2.2401922 9.5621312 8.3345021 8.6469561 9.1214786 15.4901300 10.5531425 11.3302333 8.8403930 2.5531393 11.0353454 7.8786726 12.7135181 12.4089453 9.2878520 9.1926642 7.1138578 10.9456746 0.0036076 1.3683000 -0.3711000 0.0863770 0.0863770 0.0227250 0.1766400 -0.0657160 -0.0969680 3.6455000 3.6455000 3.2894000 2.0685000 -0.2289600 -0.6141100 0.5320400 0.5320400 -0.2752300 -0.2752300 -0.6223600 0.0000000 -0.2860800 0.1805600 0.1805600 0.1805600 0.0269350 0.0269350 0.0269350 0.2752100 0.0036076 0.0036076 -0.5471800 0.0863770 0.0227250 0.0620800 -0.4399400 -0.4281100 -0.0657160 -0.0969680 0.5606300 0.0284810 0.0284810 -0.5347000 -0.3851500 -0.3851500 -0.3851500 -0.3851500 -0.1791700 0.1380600 -0.5559700 0.5320400 -0.2752300 -0.2752300 -0.2752300 -0.6223600 0.0000000 -0.3007500 -0.2486100 0.1805600 0.1805600 -0.2230500 0.1462200 0.0269350 0.2752100 0.5521300 -0.1009200 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 7.0191170 14.0515429 -0.7688134 7.8678390 2.8125598 10.5576439 -0.7688134 6.3397396 8.4036418 10.6100511 1.2311866 6.6824258 5.0385679 11.4342564 9.3133633 3.3186784 1.5531639 10.8921017 5.9036409 10.1320812 9.3623767 6.7069477 11.2142079 0.2311866 9.4980009 9.8696503 6.4111228 NA 10.6637563 8.4956568 13.2882754 13.1852289 4.4406666 9.5542692 9.8929925 9.9667705 6.3707659 0.8161491 NA 3.2312173 8.1229983 10.5688363 5.5349954 2.0385767 10.0423884 7.4210390 10.9919343 6.7625960 10.0409825 3.6235274 11.6522272 2.0385767 4.6906462 10.3799896 8.8084732 0.2311866 7.3860323 7.4743882 3.4011389 12.4853572 13.3985541 -0.7688134 10.7320562 1.5531639 11.2871746 1.5531639 8.3707659 7.9557284 10.796669 9.116911 9.189767 12.921540 8.866914 9.852351 3.690641 10.978148 9.278338 10.012574 13.179947 11.996500 8.853266 7.460033 4.138102 8.544097 10.986102 10.6559055 5.9177158 8.5643698 8.9142090 8.4791420 9.4822469 3.4011389 5.6406065 9.5166166 10.3338462 -0.7688134 8.6720834 8.3266376 13.1188158 9.1214786 8.9149636 8.9036397 7.0191170 3.0385767 9.8320564 10.0117542 11.2803823 10.4327257 10.1810410 9.2269815 6.4308874 10.1153544 6.5073396 2.8161696 7.0891952 3.4791400 11.0477981 8.9177149 6.9861014 14.1688640 10.7939338 11.1115632 14.2677314 10.6078824 8.7469143 NA TCGA-E2-A1LL 74 0 NA 1309 breast stage iiia t3 n2a mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 5 black or african american not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 1.112456e-07 11.7833972 4.2480034 5.3934334 10.1179951 -0.7963603 8.8528662 NA 9.0584783 12.0034986 6.5523386 9.5742974 7.1284223 8.0205933 9.8274913 3.9584994 10.2197218 9.3672597 10.6742688 7.6256745 3.2036084 9.4539083 11.7180774 13.3567661 9.2064249 9.3121344 10.6594508 3.2036084 10.5022453 -0.7963603 NA 8.5567566 13.9969592 12.2686894 5.5073919 11.3351453 10.4014409 10.4014409 5.9178566 3.2910731 3.7885709 8.6712155 10.1089969 10.0569195 10.2930604 NA 12.6851571 10.5732072 3.9584994 9.8694521 11.1086208 7.4750727 2.3735369 1.2036397 12.6689620 7.5119487 2.9040409 8.1780244 -0.7963603 3.5959333 9.7408283 10.4878556 9.4913222 9.5578592 8.6256745 10.5390003 1.5255177 10.6209350 10.3264379 5.5611611 8.6486247 2.7885813 7.6671343 15.9859683 7.0121239 10.6563660 8.4727367 9.8456616 0.7886022 1.5255177 8.6914501 9.2656561 10.8892347 -0.7963603 3.0109588 8.8953535 9.4657047 11.7425263 12.0822356 5.1578077 2.5255427 10.3418817 12.0635329 1.7885604 13.2025528 4.4515342 7.3835194 11.7591577 14.6269885 12.5855584 6.4515375 9.8456616 10.5970003 10.0724325 10.9276974 4.7271744 9.3029578 11.6967148 8.7829258 NA 11.2259777 8.7543567 3.9040505 1.7885604 9.7932611 8.9551541 9.8044520 10.1022113 15.3023822 9.7753625 8.3660013 5.6130012 0.2036397 12.3142563 6.7193094 14.2399982 12.8289763 9.3042721 9.8007314 8.1402480 9.4038465 -0.00013862 0.06866500 0.04004400 -0.29520000 0.31528000 0.05893700 0.36637000 0.23566000 -0.28575000 -0.28299000 -0.28299000 -0.27236000 0.00000000 0.00917050 -0.01409000 -0.33237000 -0.31638000 0.75681000 0.07239600 -0.29023000 -0.27547000 0.30969000 -0.32065000 -0.31809000 -0.31611000 -0.02219500 -0.02219500 -0.33318000 0.25762000 -0.05401600 -0.34458000 0.02918400 -0.29863000 -0.02739800 0.04749000 0.25798000 -0.69577000 0.23566000 -0.67802000 -0.30921000 0.30441000 0.06494000 -0.69033000 -0.29591000 -0.96186000 0.27884000 0.44122000 0.00917050 -0.04939900 -0.67921000 -0.27212000 -0.27140000 -0.31132000 0.27300000 -0.29071000 0.31691000 0.16265000 -0.15541000 -0.33329000 -0.31809000 -0.29851000 -0.22281000 -0.33318000 0.02890300 -0.30075000 0.04429000 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 6.8329659 13.4150420 6.5164927 9.0365000 1.9776096 10.0608133 -0.7963603 4.5255365 9.1722767 8.1490535 NA 7.0862530 1.7885604 11.3075534 9.3016421 0.2036397 5.1578077 10.0317464 11.9630820 9.0221922 10.0236852 6.3328923 11.5437382 NA 6.2259786 10.5390003 3.2036084 NA 10.6615038 3.9584994 12.8035228 12.6437004 6.4515375 8.7074358 9.4106241 8.5829883 2.3735369 0.2036397 -0.7963603 NA 8.6813681 9.8936079 6.1105011 6.7427689 8.7601158 7.7466420 9.0506671 6.4703969 9.0724325 NA 10.5770189 5.5786489 1.5255177 10.4834003 7.0603468 3.4515408 8.8970970 6.5255380 5.5611611 7.2480044 14.2652342 NA 10.9157069 NA 10.2036098 4.5959273 8.5232820 7.2036103 12.713509 7.777257 8.895354 11.335145 9.505106 10.495932 10.293060 12.683516 9.010965 11.443507 13.389879 12.277082 9.265656 8.086253 NA 7.403282 10.627776 11.2456112 5.4703969 9.3634812 9.9169964 8.9252218 10.1689468 4.2480034 5.6130012 9.2064249 2.7885813 6.6298753 8.4843807 9.5408638 13.7515286 8.8813297 8.7516227 9.4797344 8.9281236 4.5611611 9.4913222 10.8415932 10.1679507 11.6760469 10.7232462 9.0755152 8.2370330 8.8213527 7.9750993 4.5959273 11.7425263 3.2910731 11.0249853 10.3418817 7.3225510 14.2564326 9.9955867 9.8848484 11.9057826 10.7791491 10.0213930 -0.7963603 TCGA-E2-A1LS 46 0 NA 470 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white NA 136.49.0 NA NA NA 1 NA NA 2 5 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.307136e-06 3.337367e-07 11.058419731 2.908332570 6.525005497 10.233264591 NA 10.273489897 1.586404475 9.194968812 11.061125839 5.967228565 10.170742172 9.408711224 8.402322690 9.867176635 8.339065213 9.676518305 9.870265916 11.009171559 8.647101846 -0.998558026 10.547373189 10.038990437 13.108496981 10.777053735 9.197430747 10.614311944 3.586404475 10.790569487 NA 4.586404475 6.460875231 12.446458267 13.133541452 4.701881692 10.587814075 13.765693019 8.421403414 7.171367976 0.001441974 7.648901838 10.996857238 11.523043836 7.528920543 8.289155737 NA 13.475783124 10.425084638 6.358995736 8.843793888 11.150555425 7.666779311 7.582644061 0.001441974 13.147458328 6.220612429 1.323370069 7.012670347 NA 3.645298164 9.072905676 9.469048949 9.258831230 10.091555848 10.264712582 9.471085214 NA 11.684438004 9.782803162 2.808796896 5.756332145 -0.998558026 5.659656311 14.089113429 8.798991434 10.410834394 9.080928090 9.357895483 -0.998558026 NA 8.206014584 8.874887623 12.489785707 NA 4.001441974 5.586404475 10.137152670 10.235063087 4.586404475 8.284531715 2.808796896 10.206625765 12.375803705 -0.998558026 14.231276143 4.088904815 8.021034369 13.054690541 12.363798242 13.066691242 7.893226891 11.054351027 12.102762572 11.677883191 10.838282752 3.785948049 8.464967981 12.052652341 9.518128301 3.808796896 9.480213008 9.678281989 0.586404475 4.249369488 10.701015901 10.819626116 10.020338984 9.893227195 15.535001291 9.241041934 9.296064100 8.983010682 0.001441974 13.593666843 9.230262106 12.541329219 12.210744451 10.421403625 10.266472322 8.575090675 9.226084358 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.736152948 9.755495844 7.497298598 8.550265422 1.388244653 13.181119296 -0.998558026 -0.998558026 8.438154764 10.591094524 4.673867316 9.484926789 5.920307594 10.538176319 8.971549302 NA 7.752987371 10.716547441 9.325623870 8.945423352 8.919113899 7.062138985 9.468029738 1.001441974 9.191268014 9.471085214 3.088904815 NA 8.868722257 7.206014096 14.363010300 13.152697847 7.701883078 11.247293170 8.208457758 9.407648467 2.171366976 0.001441974 0.586404475 NA 7.952727854 8.001443663 7.056725493 3.460873593 11.229155641 3.586404475 9.472102270 7.473118813 9.622579552 1.808796896 12.729044846 0.586404475 7.300651823 11.294297025 7.168661088 0.586404475 6.984436688 6.859424212 0.001441974 NA 15.154302594 -0.998558026 10.621663265 NA 5.088904815 6.341293756 8.949810665 8.546407950 11.853505 6.525005 9.480213 10.587814 10.650700 11.974603 8.289156 11.148012 11.160943 11.108987 13.617418 11.661439 8.874888 8.990128 NA 6.715689 11.691005 10.703616 5.859425 8.756331 8.942491 6.827992 9.621031 3.586404 4.210895 10.777054 7.220611 NA 9.654288 7.751547 12.917603 10.440235 7.125564 7.456771 8.617992 3.586404 9.258831 10.500791 12.298073 9.379738 10.658762 7.834333 NA 8.307779 8.458927 4.525004 10.235063 4.645298 11.567022 10.206626 7.099475 14.476734 10.809603 10.539147 11.875272 9.508247 9.778699 2.701882 TCGA-E2-A2P5 78 0 NA 515 breast stage iiic t2 n3 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 21 black or african american not hispanic or latino 185.42.0 NA NA 4 3 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 1.724306e-06 5.562279e-07 11.5173391 4.1552149 7.1055251 12.0135823 -1.4297314 9.4597541 NA 9.4118145 11.3284734 8.7136333 9.4838875 7.3614131 9.1267561 9.7942518 7.9321941 8.8602691 10.1734128 9.8014714 6.3711493 0.8921967 9.7900238 11.2565318 8.7526446 10.3330474 8.6563862 10.5793789 6.5870589 10.0162995 0.5702686 0.8921967 6.8694581 9.9261517 11.9060592 6.6735381 12.0780448 13.4395066 8.9689939 6.8876630 3.3251417 6.5360342 8.8014714 9.0651056 7.3318010 13.5228094 -0.4297314 10.1986957 14.1646914 3.0938137 9.5571374 11.6290875 4.8740297 7.8134240 2.9625675 14.7015310 9.4102412 2.4771333 9.8235067 -1.4297314 4.2141093 8.9838780 10.1006564 9.3880332 10.2685207 9.4771408 9.7924412 1.5702686 10.2208531 10.1775805 5.1401038 6.2776092 13.6419220 10.8556524 14.9535663 6.9710020 10.5142301 10.2943376 7.5532438 0.5702686 2.9625675 6.4711175 8.1589646 10.4894859 -0.4297314 6.3049600 7.6036731 9.2576259 11.0871813 5.0938137 4.5926185 4.2706934 9.6125936 12.0936896 3.0296826 13.2932711 6.0296826 7.0378555 10.6504014 12.8800107 11.6616855 7.1016312 11.3207478 11.0616022 10.2195063 10.4650679 3.7797010 9.5856653 11.4690405 11.7187267 -0.4297314 10.4007654 9.2896390 -1.4297314 3.2561955 7.9387568 11.5403561 9.3614131 8.1977838 14.7163613 9.4688515 9.7894187 8.2014270 3.4771463 15.3345516 9.1064972 13.1185302 11.7597659 10.4352101 9.8411295 8.3516098 10.5817919 -0.4509000 0.5620500 0.9407800 -0.0032237 -0.0085766 -0.0127130 0.5350300 0.4935500 0.4496900 0.8071400 0.8071400 3.6569000 0.4761800 0.5082800 0.0022193 0.0535100 0.0535100 0.4894000 0.4894000 -0.4973600 0.4705500 -0.4736100 -0.4214500 -0.4214500 -0.4561800 0.0989970 0.0380720 0.0690950 -0.4376700 -0.4509000 -0.4509000 -0.3904000 -0.0032237 -0.0127130 -0.0325870 0.0068044 0.0272160 0.4935500 0.4496900 1.0063000 0.0454240 -0.0139530 -0.4928500 0.5434700 0.5434700 0.4247300 0.4770100 0.5082800 0.5082800 0.0022193 -0.4520100 0.4894000 -0.4934000 -0.4596100 -0.4973600 0.4705500 -0.4526400 -0.4439400 -0.4214500 -0.4214500 0.4670700 0.1435500 1.0591000 -0.4376700 0.4102800 -0.4107200 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.453 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.327 0.807 0.477 0.477 0.000 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.453 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.327 0.807 0.477 0.477 0.000 8.0879194 12.5926180 6.8038702 9.8252787 1.0427144 11.7916862 0.5702686 -1.4297314 9.0780448 9.5237192 0.8921967 7.5702504 1.1552311 10.0038356 9.4972872 2.0296649 7.3417394 8.9561124 9.4913473 11.5760501 9.3048074 6.4467674 11.1613049 0.8921967 9.6119093 9.7924412 4.2426787 NA 10.7373546 1.8921967 12.5307047 12.2781485 7.2284618 9.9647128 7.3936170 10.0795303 3.4282362 0.1552311 -1.4297314 6.6839925 9.5105638 10.1936744 9.9785799 2.6577086 10.2525644 8.9668549 10.1678372 5.6891901 8.5229914 NA 11.5842706 3.4771463 5.1996056 10.1949359 7.3925338 -1.4297314 8.7501593 7.2532443 8.7174550 0.5702686 14.4939490 -0.4297314 10.5688406 NA 7.1438974 6.3646652 7.9561124 8.7514025 12.583602 5.910099 8.401558 12.078045 9.325138 11.467150 13.522809 10.547530 8.757602 10.330138 12.794176 12.480612 8.158965 9.386434 2.270678 6.683993 10.602640 11.687731 5.883132 8.286212 9.496546 8.242675 11.676095 6.351611 9.289639 10.333047 7.037856 1.155231 6.390429 7.752868 9.575173 10.425119 8.889922 9.505415 10.197784 3.570244 9.388033 11.168303 10.876312 10.310031 10.793347 7.573065 10.966587 8.930022 6.568897 3.892177 11.087181 6.155213 11.194589 9.612594 6.855652 13.901552 10.131061 10.068102 11.942707 11.750936 8.979641 1.892197 TCGA-E2-A2P6 77 0 NA 168 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 1 NA hispanic or latino 185.42.0 NA NA 2 3 NA NA 1 3 3 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.558648e-06 1.084644e-06 10.7725980 4.9614844 7.7757703 11.5477976 -0.5141610 9.8405518 -1.5141610 9.0171330 10.6534832 10.2894790 9.8694558 7.3218019 8.5625672 9.3359383 7.3123003 9.3437325 10.4370362 9.3729721 7.0441722 -0.5141610 12.3783892 10.9672987 9.7348649 7.6581786 8.6841967 9.9302487 5.2931056 10.3599644 0.8076846 2.7336797 7.3281022 11.7678263 12.7721648 6.3683947 13.3622205 12.7646364 8.7803721 6.3866178 3.1296127 6.1931113 8.6033945 9.4216531 6.4801051 13.0865355 0.8076846 11.1783669 14.1950238 6.5356004 10.0784374 10.8292148 8.3170589 6.0171336 1.0707328 12.6329556 9.2473026 2.8076846 6.9695673 NA 4.1861915 9.5136575 10.0758706 10.5143483 11.4419461 8.9057116 10.0603449 7.8498861 10.7708646 10.7466710 7.5785086 8.8076795 2.7336797 10.6758848 14.3610209 7.2831208 9.9078162 10.3649518 7.5942761 -0.5141610 7.4253309 6.2204615 8.0014515 11.9524652 3.3926471 6.3186422 7.0132289 10.0976984 11.1654515 4.4630339 5.4399489 4.6354990 10.1550794 11.9068959 6.0856647 13.5849349 5.7241564 4.7336797 11.5198626 12.0138393 12.9885211 8.7000707 10.1809798 10.0893778 9.8699955 10.0326460 3.7336797 9.0024364 11.5408644 5.6952060 0.4857359 10.1439630 8.5718876 0.8076846 3.8506694 9.5598929 9.7659423 9.8667536 8.0537076 15.3070023 10.0907680 9.8640464 8.8009012 1.9451957 15.5115183 10.3472262 12.5860031 10.8509803 9.6976397 10.1345584 8.0537076 11.0341544 1.14550000 1.44330000 1.45580000 0.00083195 0.00083195 0.00000000 -0.00750250 0.00000000 -0.01106000 -0.02005300 -0.02005300 -0.03885000 0.00180300 0.00118960 0.00944910 2.60340000 1.81400000 0.00235810 0.00235810 0.00944910 -0.00110870 0.01656500 -0.01271300 -0.01271300 -0.01271300 -0.00480840 -0.00480840 -0.01064600 0.01558700 -0.87813000 0.00346870 -0.02034200 0.00083195 0.00000000 0.00000000 -0.00750250 -0.00750250 0.00000000 -0.01058700 0.01908300 -0.00968060 -0.00968060 0.03792400 0.01852300 0.01852300 0.01852300 0.01852300 0.00118960 0.00118960 0.00944910 -0.85385000 0.00235810 0.00235810 0.00235810 0.00388540 -0.00110870 0.01656500 -0.86876000 -0.85019000 -0.01271300 -0.67039000 0.01544700 -0.00480840 0.01558700 0.02160300 0.03157700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5039517 12.2265863 3.6952032 9.3499376 -0.8094483 10.4034965 0.0706641 NA 8.6393034 7.8672942 -0.5141610 6.6098731 4.5518420 10.1709383 9.9046583 5.7525372 6.6755760 9.4231254 11.1678683 11.0004655 9.3543349 7.5679006 10.8009010 3.3926471 9.2456397 10.0603449 2.1861836 3.7336797 10.9984919 3.9451863 11.9248032 11.6296129 7.1861915 10.1550794 8.5219251 9.4666051 1.2931350 2.0706984 NA 5.5942768 8.8737686 9.6780443 11.2603326 3.9120175 10.1940983 7.1827191 9.7277347 5.2539363 9.6927658 -1.5141610 11.2685450 -0.5141610 4.5301457 9.5289565 7.5516521 4.0403401 9.7997681 8.2439746 7.0479942 0.0706641 13.8073625 0.0706641 10.1291568 0.8076846 6.1078029 5.6456239 7.4801051 8.8289371 14.5551058 5.5410346 8.6878753 13.3622205 10.5735027 10.8812856 13.0865355 12.9763517 10.2433456 9.8802141 12.8987843 8.7757703 8.0014515 8.5639021 0.0706641 7.4885664 10.9469751 11.1526412 5.3186422 8.7384169 9.1205624 8.6494010 10.0654210 7.5136573 5.9203791 7.6581786 8.3296726 0.4857359 4.6755788 7.6573034 8.9451831 10.6771192 6.6201773 9.5403557 9.9307663 5.1581754 10.5143483 10.7437285 10.8710746 9.5798292 10.6024203 6.8121812 NA 8.5352598 7.2791592 5.3312430 11.1654515 5.5301457 11.3458685 10.1550794 7.5864135 13.5937527 9.6443612 9.9705743 11.9093927 10.6872628 10.2712040 -1.5141610 TCGA-E2-A3DX 43 0 NA 478 breast stage iiic t2 n3 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 25 white not hispanic or latino 202.42.0 NA NA 2 5 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.064066e-07 4.560284e-08 10.8298398 10.1559833 7.0038001 11.5715278 4.8356765 10.9409088 -1.6402540 10.0288287 11.8531737 10.5235933 9.3075806 8.2832713 8.3486286 9.8587929 7.5620676 9.3372236 10.9481898 9.6308230 7.8776130 3.4474073 10.9109309 11.1741256 10.8290767 10.5830404 9.4002335 10.5410959 7.3655683 10.4795235 0.6818540 3.4474073 9.7229834 12.1404834 12.5493050 7.2179247 14.6289973 12.8805624 10.4304001 7.7108829 4.6267312 7.2995231 8.6591518 8.0464441 8.5096907 12.3888857 3.7862095 10.8175811 12.0559331 6.6728270 9.8475125 9.6716920 8.6705564 5.9598559 0.3599709 14.4294085 9.8162981 3.4474073 9.1761273 -1.6402540 6.4420926 9.9312222 10.9686605 9.9538016 11.9192013 9.7003502 11.1229485 2.2668465 11.5365843 10.5074666 7.2995231 7.9672741 9.6493862 10.9197987 15.4081006 8.6296550 11.7489027 11.2735811 8.7650852 3.1148334 3.1672937 8.9259976 9.5791122 12.1192077 -1.6402540 4.8193770 7.1214952 9.8224459 11.4174278 12.4057886 7.5248504 4.6818709 10.3557108 11.6650079 1.1672937 13.4382613 4.8356765 8.1347307 13.7486673 12.0598414 12.8497289 7.9561333 10.1466217 10.8155278 10.5636037 11.5704628 5.5596172 8.2802966 11.9080431 10.6928194 0.6818540 10.4169201 8.9126127 2.2668465 3.5895358 10.0806154 10.2077840 9.9174074 8.7130906 15.2647429 10.6874963 9.7867326 8.6997938 3.8835035 15.6589012 9.3104996 12.9189024 13.2880456 9.9943010 9.7597556 8.1975715 10.6743456 -0.00771790 0.27490000 0.27490000 -0.00055444 -0.00507400 -0.00490110 0.00000000 -0.00110870 -0.00110870 0.01279500 0.01279500 0.01279500 0.00032584 0.00032584 -0.00346270 -0.00346270 -0.00346270 0.00000000 0.00000000 0.00013863 -0.00235530 0.00221930 0.03016900 0.03016900 0.03016900 0.00097064 0.00097064 0.00097064 -0.00097017 0.00180300 -0.00771790 -0.00286710 -0.00055444 -0.00490110 0.00194180 -0.00344150 -0.00263220 -0.00110870 -0.00110870 -0.00110870 -0.00055444 -0.00055444 0.01279500 0.00235810 0.00235810 0.00235810 0.00235810 0.00032584 0.00291330 -0.00346270 -0.00346270 0.00000000 0.00000000 0.00000000 0.00013863 -0.00235530 0.00221930 -0.29579000 0.03016900 0.03016900 0.00319100 0.00097064 0.00097064 -0.00097017 0.00485790 -0.01436600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.44375541 13.32653924 7.17051498 10.78830381 6.03942357 10.97511347 5.75226155 1.52987091 8.33579184 8.08104291 -0.64002911 8.92995103 4.38231449 9.64476787 9.65341531 1.68185402 11.22992301 9.45797569 12.84104933 10.39474263 9.63632989 8.02350155 11.23530906 3.91453582 10.04293826 11.12294852 6.88742048 NA 10.41827366 2.88350352 12.95041377 12.33847539 9.02971459 10.15679451 8.43542274 9.13390716 3.68187650 0.35997089 -0.05514155 3.16729369 9.02261194 9.74418784 9.57790140 5.58876260 8.31184048 6.41522628 10.00470124 6.25476220 9.68412425 -0.64002911 11.56130184 5.47888446 4.98930253 9.11941584 5.39798431 8.37256822 9.72899561 9.43073542 9.55593097 0.68185402 13.62203852 3.06037602 10.20739252 -1.64025395 8.43006444 6.34293692 7.43675901 9.17372485 11.5690726 4.6637260 8.3372236 14.6289973 10.1757272 10.0707501 12.3888857 12.4981355 8.9106712 10.8462759 13.3716514 11.6704145 9.5791122 8.2225810 -0.6400291 6.7042398 11.1231560 11.671692 6.348629 8.611414 8.838713 8.139663 10.260010 8.804959 7.612609 10.583040 7.376752 3.447407 6.659151 6.762060 12.544199 11.071826 8.313674 8.211693 13.622075 8.060384 9.953802 10.321755 11.629216 10.144987 10.484065 9.417259 NA 9.965479 8.862686 9.799255 11.417428 8.435423 11.547630 10.355711 7.897162 14.046690 9.868234 10.275823 13.084884 10.978788 9.883506 4.087862 TCGA-E2-A56Z 69 0 NA 219 breast stage iib t2 n1a m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 305.23.0 NA NA 1 2 NA NA 1 1 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.17776e-07 1.668684e-07 11.6755005 3.7087170 7.5017926 11.2403720 NA 9.9915705 -1.1491206 9.4196468 11.0534766 9.1939265 9.4562201 6.7932547 8.9288914 10.0735355 7.7455587 8.3644683 9.4300565 10.5909430 6.2344458 -0.1492806 10.9444883 9.7009274 13.8044369 12.7409099 8.9127867 10.6439375 5.7814777 8.8869144 0.4357353 -0.1492806 7.2558821 10.0771529 13.1639780 9.1805370 12.6070885 12.6430226 9.6288177 6.4281692 2.5511715 5.4205969 8.2998894 8.1151831 7.1771703 12.9663533 3.0206622 9.5615471 14.2443657 1.1726795 9.8089309 10.2680658 8.6709196 7.6386430 -0.1492806 14.5106145 8.6238797 NA 7.1950365 NA 3.1726635 8.9979455 10.1777318 9.4024489 9.3070951 9.5795115 9.1140098 0.4357353 11.0390204 9.8640632 6.3821225 6.4129830 5.0405637 10.7531158 13.7012693 8.0882376 9.5416116 10.4990982 7.8814077 NA 6.5922073 7.2344448 7.3624936 9.3791947 -0.1492806 5.0986680 7.9696818 9.4626875 10.0137612 3.6580972 4.1726715 3.4945948 9.6337389 12.3572962 4.7576314 13.4468721 6.8280209 7.8450942 10.3475945 11.0219175 12.2357941 8.6072970 10.6052106 10.8150815 11.0241055 10.1579415 4.0206622 9.2832826 11.5932606 11.2762188 2.5511715 10.0771529 8.6820479 -0.1492806 2.3101656 7.8951348 10.4723346 9.2998894 8.7394839 15.6118633 10.6942692 9.5786610 7.6056284 4.6056306 15.5493504 8.4963992 10.7895851 10.0004878 9.5896774 9.6852117 6.9434983 10.3532344 -0.041612 0.673570 0.472920 -0.089346 -0.089346 0.429850 -0.038215 0.449970 -0.085236 3.656900 0.299890 0.289040 -0.022515 -0.533760 -0.020869 3.400000 -0.547670 0.547650 0.485100 0.777850 0.598300 0.221860 -0.547070 0.505970 0.505970 0.006341 0.006341 0.006341 0.517460 -0.041612 -0.542630 0.000000 -0.089346 0.429850 -0.068170 -0.038215 0.511530 0.449970 -0.093482 -0.085236 0.359150 0.453370 -0.208250 -1.107800 -1.075400 -0.305370 0.479530 -0.533760 -0.533760 -0.020869 -1.091700 0.485100 0.485100 0.485100 -0.221110 -0.549630 0.221860 0.099385 -0.547070 0.505970 0.345450 0.006341 0.006341 0.516780 -0.186010 -0.548880 -0.534 -0.534 0.000 -0.527 0.485 0.485 -0.221 -0.550 0.222 0.990 0.000 -0.547 0.506 0.345 0.345 0.000 0.000 0.000 0.434 0.517 0.517 -0.186 -0.549 0.000 0.000 0.000 0.000 0.430 0.000 0.000 0.512 0.450 0.000 0.351 0.351 -0.182 0.107 3.657 3.351 0.037 -0.534 -0.534 0.000 -0.527 0.485 0.485 -0.221 -0.550 0.222 0.990 0.000 -0.547 0.506 0.345 0.345 0.000 0.000 0.000 0.434 0.517 0.517 -0.186 -0.549 0.000 0.000 0.000 0.000 0.430 0.000 0.000 0.512 0.450 0.000 0.351 0.351 -0.182 0.107 3.657 3.351 0.037 7.2811928 12.0830116 5.0986680 9.8337342 2.4357086 11.6058369 -1.1491206 -1.1491206 8.9657843 6.9168301 -1.1491206 6.3101729 0.8507194 10.4422630 9.6637202 5.2770065 7.1636235 9.3274869 7.7666203 11.0998541 9.6170957 6.8619678 10.7425244 1.4356819 8.8222843 9.1140098 1.8507594 0.4357353 11.0744407 3.0206622 11.5524803 11.6637201 7.8978648 10.5498793 10.5222817 10.0461129 4.3743023 2.4357086 NA 6.4945964 9.5416116 10.7621326 10.7643781 2.7576207 8.2374222 7.9222032 10.1760461 3.9800253 10.0262902 NA 9.1442124 NA 5.7696051 10.1532139 6.4212031 1.8507594 10.1297707 6.9222026 9.1057692 -1.1491206 13.7873326 -1.1491206 11.5026893 NA 6.7991080 5.8841632 9.3850436 9.4873654 15.991294 6.664521 9.362493 12.607088 10.445532 10.676495 12.966353 11.558962 8.219247 10.003659 12.348967 9.976800 7.362494 8.285369 2.658097 7.297824 11.243595 10.6361931 7.2430578 9.3555597 8.9864499 8.6271738 10.6977236 5.1545225 9.3575441 12.7409099 7.7636300 NA 7.2214276 7.1761811 9.1069494 9.3985992 7.8507407 9.6288177 7.2170630 3.8049415 9.4024489 10.6609105 10.6419035 9.0711191 10.1482301 5.6451569 NA 7.8149951 6.6056277 4.4654521 10.0137612 5.8507394 11.0831616 9.6337389 6.7576314 13.3182188 10.6093803 9.3575441 11.8328430 10.2811932 9.1407595 -0.1492806 TCGA-E2-A570 47 0 NA 931 breast stage ib t1c n1mi m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 305.23.0 NA NA 2 2 NA NA 1 1 3 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 2.224912e-07 10.6594987 5.5571650 7.6561538 10.8613608 NA 10.0173417 NA 9.1228730 11.2682845 12.1140194 9.3738578 7.5775134 8.2474804 8.6694860 8.4353552 9.3337475 10.1871839 9.6666396 7.5612582 1.0977456 11.6812863 10.9314142 12.0400647 10.7572834 9.2714105 10.0828638 4.4196602 10.5875814 -0.9023892 7.0750138 7.4196619 10.2121265 12.4423955 7.9179127 12.9553257 11.6532812 9.9353613 7.1033581 1.6827081 7.7050635 8.5323618 8.4921961 8.3071867 12.6656895 2.5571650 10.5955852 14.1161510 4.3456589 9.9633662 10.5118901 9.0735814 6.3361388 NA 13.9942673 11.0498194 NA 8.6789339 NA 2.9050813 9.6173698 9.6666396 10.2101729 10.6266759 9.5417131 9.7683896 2.4196737 10.9669417 9.8213944 6.3923535 7.7087584 11.1204480 11.7802892 14.7549681 7.7062840 9.7973058 10.4414743 8.4196615 3.3456660 NA 8.7433918 7.6901908 11.4375835 2.0977456 6.4986131 7.7666183 9.4803574 10.9183113 7.0165966 5.6976460 3.6212900 9.7675043 12.1703685 3.9557127 13.5734035 8.6271640 8.4900510 13.2424713 13.8098305 12.2675019 8.9306235 10.0475602 11.0292096 10.3925437 9.7316369 4.3831375 8.9864766 11.7404621 11.7886044 NA 10.7955698 8.6561542 -0.9023892 5.6345642 9.0991416 10.4072098 9.4497768 9.2651516 15.2052366 9.8864518 9.1380232 8.5260935 2.6826857 15.0331289 10.0591831 12.9619196 12.3334485 10.3721116 9.9564916 7.8119789 10.2231469 0.00169510 1.19170000 1.19720000 -0.00604510 -0.00123400 -0.00154590 0.00225020 -0.00630890 0.00197260 0.00000000 0.00000000 -0.00340660 0.00086278 0.00086278 -0.00115270 -0.00115270 -0.00115270 0.00211140 0.00211140 -0.00052363 -0.00107790 -0.00370870 -0.00398550 -0.00398550 -0.00398550 -0.01461000 -0.01461000 -0.01461000 0.60778000 0.00169510 0.00169510 0.00322190 -0.00066222 -0.00154590 0.00794850 -0.00426210 -0.00426210 -0.00630890 0.00197260 0.00697440 1.09560000 0.95607000 0.00000000 0.00016946 0.00016946 0.00016946 -0.00440050 0.00086278 0.00086278 -0.00010781 -0.00115270 0.00211140 0.00211140 -0.00398550 -0.00052363 -0.00107790 0.00055298 -0.61957000 -0.00398550 -0.00398550 0.00480850 -0.01461000 -0.01461000 0.60778000 0.00363850 -0.01034000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.096 1.096 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.096 1.096 0.000 0.000 0.000 0.000 0.000 8.84927748 13.51393719 9.90508836 10.10054842 2.41967372 10.90589321 -0.90238920 -0.90238920 9.49967949 8.98037639 0.68266318 7.10896034 2.79817497 10.40891413 9.50074550 4.18519260 7.27764262 9.62911488 8.27515282 10.93811800 9.06553596 6.20625836 10.62667586 1.09774562 8.41288312 9.76838963 5.24747945 0.09774562 10.44036372 2.90508128 12.30367936 11.47358740 7.97425052 10.07715860 8.01957461 9.58154916 3.68269689 2.55716498 1.41964675 10.17588421 9.09350049 10.21082437 9.16247618 3.34566604 10.03537208 8.21667457 10.41796989 5.24747945 9.36217595 NA 10.11454168 3.00462723 3.68269689 11.07080650 6.54051090 2.09774562 8.29985731 7.66758917 6.73435872 -0.90238920 13.60155917 0.68266318 10.24684544 1.68270812 8.78423404 5.41966023 9.04171335 8.84760299 12.644903 6.016597 9.276398 12.955326 9.986477 11.443970 12.665690 11.843618 8.406072 9.503938 13.455492 9.394650 7.690191 9.772808 NA 7.277643 10.835826 11.0475601 5.8256534 9.2487499 8.8222474 8.3169019 9.9704545 6.1421275 7.0284708 10.7572834 8.2974056 3.3456660 7.9834297 5.9503564 10.8597001 10.7032129 8.2114756 9.8076788 7.8256540 4.0519289 10.2101729 10.4117501 10.9545480 9.4060725 9.7929617 7.2726587 -0.9023892 9.5190514 7.0635180 4.6523201 10.9183113 8.4151460 10.4292103 9.7675043 6.6134329 13.8580895 10.2308756 10.4003724 12.4587177 10.8909303 9.3574768 1.0977456 TCGA-E2-A572 72 0 NA 831 breast stage iiia t2 n2 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 322.22.0 NA NA NA 2 NA NA 1 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.9351766545 5.1492065156 5.3917780288 11.8880120906 -0.0005771935 8.3009551401 NA 8.1158031742 10.5337619893 9.0922161610 8.9810263482 6.5768879048 8.6306362621 8.8339302145 8.3168716148 7.4792394551 9.4382508445 8.4973109744 3.9536563622 1.3214086312 10.1706359046 12.3657812935 13.0552499101 11.3470804503 7.7543463901 9.9966385807 2.9994588879 8.3939219578 NA 1.8068189644 5.4257244817 9.7585150561 12.1920601457 4.9994588879 13.2146887185 12.5640849532 11.8210337932 7.3614025520 4.0438519139 6.0106858636 6.7610099541 10.4083195495 5.7543477264 12.0885784763 NA 13.3874090854 14.8178415477 6.2473864013 11.0415630600 9.0120836713 6.3032400928 9.7102655799 -1.0005771935 16.6582454504 7.8636454971 -1.0005771935 7.1843348507 NA 2.3213797666 8.0869217291 8.3874762809 10.0431699051 9.0190496858 6.9881438588 10.1668772220 1.5844334155 9.2986670208 9.3112074584 8.5540481234 8.3548100394 0.5843853073 9.9294571169 13.6898936517 0.5843853073 9.9717210060 9.1979042057 5.6433165209 1.3214086312 8.6665705631 6.5072539246 6.5768879048 9.8589939461 -1.0005771935 2.1693798803 6.6067901268 9.5171284237 11.2258712614 5.5993713581 2.9994588879 2.8068189644 8.2662454286 11.4125580977 1.9994588879 13.3581102949 8.5444235622 5.6998986060 11.2633150982 12.5983257952 11.2656599908 10.0574508137 11.0872533833 9.8003589496 10.4434386118 9.0064862600 0.9994949683 9.5806597524 10.5669399387 10.2021950995 NA 10.0601550899 7.2040301545 0.5843853073 2.4588806663 7.4751927243 9.8315579121 8.0356327066 8.2662454286 15.6793789699 10.6701153584 8.1643659403 6.5463543125 2.9063518889 15.1700101267 9.3381955212 11.6383474851 10.9142179044 9.0802765821 9.4792394551 5.8821025488 9.7825555071 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.7476519053 11.3137590811 1.9994588879 7.9909809466 1.9994588879 11.2662456043 1.8068189644 NA 9.3370810687 8.1364503204 NA 5.1492065156 3.3213941989 10.0452187882 9.4183658036 2.3213797666 5.5072523386 7.1235803290 10.8052029616 13.9448572016 9.5424523052 5.4088510975 10.6315455053 NA 10.2155986415 10.1668772220 3.7543423811 NA 10.6833309978 4.3570100125 12.5422491490 12.3390307682 6.6576700134 8.6683439608 10.4035362638 10.6581168474 2.1693798803 -0.0005771935 NA 7.7137047492 10.4408471637 12.7289736160 9.1929844025 2.4588806663 8.5922525787 10.8488642040 10.3264502735 4.4588937866 9.9235292406 -1.0005771935 10.9580117846 NA 7.8386631487 9.8405752713 8.7657893171 2.8068189644 10.2366689981 7.3168716148 9.3614027713 -1.0005771935 14.3667714495 -1.0005771935 12.0974911684 NA 4.9301979999 3.9536563622 7.7742461122 9.5975116208 14.739309 5.374497 8.576888 13.214689 10.412029 10.851598 12.088578 10.214992 7.888203 9.263902 11.893898 9.803590 6.576888 8.499305 2.699907 6.523021 8.818041 9.5834820397 8.1793682267 7.7476519053 8.1618504056 6.8449492526 9.1312259972 5.4751919135 8.5674150108 11.3470804503 8.0411181080 -0.0005771935 8.1338855933 6.8732103093 5.7543477264 8.9522004628 7.6935036843 11.8250141727 3.8068189644 2.1693798803 10.0431699051 11.3134757902 8.9405068246 8.4173116138 9.9478262656 5.4913111824 NA 8.9109859386 8.7154898206 3.5230224127 11.2258712614 8.6736514652 10.5745256008 8.2662454286 6.8698232991 14.6587024545 11.5564440251 8.7476519053 11.3687837881 9.6288156902 8.0438530073 -1.0005771935 TCGA-E2-A573 48 0 NA 1062 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 305.23.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.056833e-06 2.781139e-07 11.60995211 1.70907002 7.70908519 10.81499383 NA 9.48575325 -0.09819665 7.86173210 11.24768997 10.00501815 9.26805256 6.76591659 7.93239726 9.59521738 7.37340548 9.17552585 9.07790362 11.30100832 9.30367642 5.74722088 10.82654285 12.25790719 11.91487855 11.27975421 9.89112492 10.32221694 8.14728329 10.40754194 -1.09819665 3.42529816 7.83542074 11.02746670 12.74957072 7.83542074 11.50674682 11.31615134 11.59194663 6.10140215 2.60217179 7.12573168 8.41545785 8.10874450 5.82059256 5.50164296 -0.09819665 11.75464996 7.78131381 7.82654277 9.90428523 10.49184959 8.74250818 7.15911852 0.90172613 15.91276987 10.79199464 -0.09819665 8.70263019 -0.09819665 6.32799448 9.91015895 10.22928304 9.60390299 9.10262900 9.52011596 9.88828358 2.07165971 10.58340804 9.96647315 5.37746390 7.77209481 2.36115073 7.62965096 14.75496681 7.44255624 9.74250835 10.02261624 9.36013708 2.36115073 -1.09819665 8.14728329 8.76746379 10.96983682 0.48666289 4.65661649 7.45247683 10.83726374 10.12633511 5.39358438 8.25708136 6.86173210 8.49792008 11.89749752 2.48668863 13.79948130 6.38554666 6.96781993 10.97988115 12.45727814 12.44306903 8.33844180 10.93274227 10.79616919 10.40157629 9.84277790 3.42529816 8.66991471 11.74132785 9.51090912 -1.09819665 10.67280709 9.11847627 0.48666289 3.99046481 8.88899433 11.76533591 10.36423262 9.56083435 14.70129026 9.67980748 9.42038345 7.75035326 1.70907002 13.05670666 7.35705753 12.64908418 13.25273859 9.58296878 10.47632386 7.46015115 10.24664762 0.0874280 0.6242900 0.6015600 0.0507140 0.4477000 -0.3950500 -0.1556300 0.5212300 0.3572900 0.1318800 0.1318800 0.1318800 1.0744000 0.0909030 -0.1419000 -0.1348100 -0.1348100 0.1777300 -0.1456000 0.2756300 -0.1399700 -0.3628000 -0.1397100 -0.1397100 -0.1397100 -0.1390700 -0.1390700 -0.1390700 0.4606300 -0.0696420 0.0874280 -0.1057300 0.0507140 -0.4820500 -0.3950500 -0.4904400 -0.4810600 0.5212300 0.3572900 0.3572900 0.1209700 0.1574500 0.1474500 -0.1251800 -0.1251800 -0.1251800 -0.1251800 -0.5800600 -0.1463500 -0.0075739 -0.1348100 0.1175900 -0.1386800 -0.1386800 0.0094856 -0.1399700 -0.3628000 -0.1395800 -0.1397100 -0.1397100 -0.1379100 -0.1390700 -0.1390700 -0.1856800 0.4492900 -0.1309200 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.000 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.000 8.9651254 13.0498891 1.9017261 9.6142573 3.1496658 12.5775772 4.1871343 5.7219085 9.2180120 8.9268700 6.1305500 7.0716554 5.0310114 10.7123020 9.4321368 5.9570138 7.4213664 10.0495713 7.8324679 9.5943459 8.4686216 6.6296510 11.0486172 2.6021718 8.7282787 9.8882836 6.3611613 NA 10.7480043 4.0716511 12.4081619 12.9772931 7.4252923 10.4462119 12.0342301 9.6723942 3.2236542 3.4252982 NA 5.2592838 8.6021699 9.8631801 9.1087448 6.6765171 9.6961218 8.1591180 10.1514365 5.6159753 9.4154581 5.9570138 11.6258178 3.2236542 4.7346229 10.3853850 7.5102807 8.3321829 8.5164403 8.4193998 10.3940843 4.3611648 13.3670417 0.4866629 10.9430473 NA 8.9003207 4.1871343 7.8847237 7.9101588 9.928524 8.614257 7.855927 11.506747 10.662866 11.378730 5.501643 8.779781 8.664943 10.459673 13.634905 10.129346 8.767464 7.130549 1.901726 8.041282 10.925485 10.884724 5.669914 9.552782 8.577688 9.199793 9.689568 7.989193 7.285435 11.279754 11.302610 5.989194 10.244361 9.098984 11.135949 10.515520 6.873274 10.661619 5.393584 8.845710 9.603903 10.352941 11.532453 11.530859 10.087845 7.456319 NA 9.723409 7.520116 9.106301 10.126335 7.005018 10.323269 8.497920 7.501643 13.790474 10.435547 10.666187 12.614365 11.678163 8.805612 3.149666 TCGA-E2-A574 44 0 NA 605 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 305.23.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.113666e-06 6.396621e-07 11.5320050 3.9213887 6.3162489 11.3941186 0.1664584 7.5018929 NA 8.3538548 10.0291401 11.1819177 8.6978840 6.3162489 8.3389302 10.0229281 7.2854438 8.5523652 8.8995180 10.2834963 9.0384079 3.6259367 11.2523070 10.4072940 12.6218299 10.2651927 9.9802838 9.6218299 NA 9.0898302 6.4519051 -0.8334131 5.3364262 10.6553470 12.0510548 9.8573736 11.9708354 11.3454787 10.5647119 8.2433182 2.9738500 9.5598931 8.5609652 8.1749312 6.3661753 3.6900595 NA 12.7439315 4.5927680 7.2325917 10.1791342 9.7994979 7.3060544 2.4884379 3.2539590 14.4511905 6.9213899 2.4884379 7.8807480 NA 1.9738684 7.2054218 10.4725643 9.0260376 9.1322869 8.9130168 9.0151256 2.3364262 8.7552174 10.1170585 5.6900650 6.2217843 1.1665226 7.4096769 13.1909498 5.0891761 9.8184513 9.8459828 12.0769580 4.2957891 NA 7.9962255 8.8389281 7.9445797 NA 10.0174709 7.0491461 10.4759790 9.4725643 7.5152307 2.4884379 5.7514664 9.3213207 12.1997536 1.4884122 13.2108114 4.0244793 6.1551866 12.2914317 11.2187310 11.9386110 8.1523447 11.1878297 10.4547920 6.0368681 9.1046121 2.6259250 10.1170585 11.6213160 10.0414841 2.1664905 9.0613204 9.4001222 NA 2.3364262 8.0972400 11.7901556 9.9986016 9.2026763 14.2623117 10.2552909 8.9834862 6.8807480 0.1664584 11.7505256 6.5415427 12.0318493 12.7647878 8.9962255 8.6683397 6.0244837 8.9514808 -0.024114 0.705130 0.614260 -0.407820 1.810600 -0.433660 1.660900 0.337420 0.353810 -1.150400 1.678700 0.941610 0.697340 -0.454360 0.155320 0.248890 0.248890 0.757770 1.507900 0.694650 -0.160260 -0.273140 0.333670 0.333670 0.333670 1.062100 1.061600 -0.515270 0.701010 -0.027398 -0.024114 0.165500 -0.407820 0.386840 -0.435280 -0.465250 -0.458540 0.357730 0.470310 0.786590 0.788910 -0.058193 -0.523480 0.000000 0.000000 0.000000 -0.447820 -0.454360 -0.463110 0.155320 0.283110 0.781960 -0.848670 -0.169800 0.694650 -0.852500 -0.269500 -0.076812 0.333670 0.333670 -0.910780 0.285330 1.042000 0.738150 -0.317160 -0.478240 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.701 0.701 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.787 0.787 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.701 0.701 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.787 0.787 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 4.7210937 12.4732764 6.7589600 8.7037212 2.2607483 10.6279821 1.1665226 4.6583543 9.7830514 5.1888717 0.1664584 9.2339369 1.7514637 10.8367163 9.9037501 1.9738684 5.1437811 10.6171985 5.0733918 10.7825920 9.7551329 5.3364262 11.8734303 -0.8334131 9.1423506 9.0151256 1.1665226 NA 9.5502069 6.7133975 14.6878884 13.3824906 7.3856709 10.0793920 7.3856709 11.9056504 2.1664905 2.1664905 NA 9.0567669 10.0756457 11.4813691 9.2352809 7.8139614 7.1857040 8.5801304 11.1843550 2.4884379 10.3618748 0.1664584 11.1170586 NA 2.8669475 9.7937995 9.1657838 NA 7.9045949 3.6259367 3.2539590 8.0491455 14.6555039 NA 11.0422520 0.1664584 9.6920235 2.7514637 8.1805233 7.5673819 11.827693 8.889310 7.941289 11.970835 9.944580 11.087228 3.690059 9.675288 9.202855 9.485045 12.149318 12.668464 8.838928 9.451905 2.866948 8.177730 9.167911 9.3187875 2.1664905 8.5085772 7.8669426 8.3314096 8.3855018 3.2539590 1.1665226 10.2651927 12.1721272 NA 8.0552461 7.7435540 10.1480699 8.9786799 8.3214727 11.3510681 1.9738684 1.7514637 9.0260376 10.4191681 11.8289485 11.0395622 9.4120553 6.8876020 NA 9.1040237 5.6900650 0.7514637 9.4725643 8.1999255 9.8781696 9.3213207 7.8318386 15.7363434 11.4948971 11.5085773 11.2533023 11.5069091 8.8442224 0.7514637 TCGA-E2-A576 69 0 NA 578 breast stage ia t1c n0 mx 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 0 black or african american not hispanic or latino 322.22.0 NA NA 5 3 NA NA 1 1 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0180510 6.3821433 5.9511635 11.6600057 -1.1256358 9.1747015 NA 8.5747888 10.4765838 11.1516363 9.3245291 6.8743494 7.6158157 9.5423474 6.5182046 7.5920257 9.7638529 8.4668057 6.1504723 2.3337672 10.6090585 9.5851554 9.0825834 11.3634442 8.1872318 9.5547084 5.5885947 9.0279010 0.8743642 0.8743642 6.5467741 8.6458385 11.9548333 5.3172932 13.6465604 13.5155540 11.1872319 7.0138999 3.5747918 8.8925492 8.2794903 9.4308550 5.2141986 12.0694134 3.7323343 10.2417637 13.6695769 4.1597503 9.7697499 10.4996012 8.0764725 3.7323343 2.4593005 14.5578853 11.0555011 -0.1256358 10.2041452 NA 3.3979125 8.3601781 9.0641734 8.0316957 9.6425332 8.8701159 9.5352361 2.5747797 10.3726995 10.4178641 8.6225417 6.2141986 4.5182078 11.9659496 13.1988811 7.3318118 9.8841775 9.8146626 6.4668065 2.6816966 3.1222751 7.2493885 6.3006143 9.2230771 -0.1256358 5.9296324 6.5254002 10.2428554 8.8672871 3.5747918 4.3006143 3.8743445 7.8855762 12.2111344 6.0342201 13.1518543 7.0789204 6.7447141 10.4465754 13.9414471 11.5984363 9.1860972 11.0536360 10.2373885 10.5708992 9.1735570 0.8743642 10.0486505 10.5569046 12.0291670 NA 9.6695769 8.8729392 -1.1256358 4.3006143 8.1666708 10.1701178 8.9471515 8.7462540 15.2731761 10.1264230 9.7961899 8.0417670 3.0442717 14.6428176 6.7991611 11.9050160 10.4513056 9.6217026 9.2308008 6.6292371 9.7401518 -0.7270700 0.0600130 0.0415340 -0.5274100 -0.5329100 -0.0471870 0.0183180 0.0413120 0.0000000 0.7447100 1.5241000 1.5947000 -0.0076742 -0.7522300 0.0378580 0.1158700 -0.7447700 0.0968940 0.0231590 -0.7579600 0.0255260 -0.7265400 0.0957310 0.0957310 0.0957310 0.1088500 0.1088500 0.1088500 0.2715600 -0.7060800 -0.7270700 0.0118930 -0.4818700 0.0487640 -0.0489460 0.0183180 0.0032157 0.0413120 0.0000000 0.0000000 0.0225200 -0.0409510 -0.7482800 -0.0094686 -0.0094686 0.0429500 0.0367130 -0.7522300 -0.0071217 0.0378580 -0.7447700 0.0231590 0.0231590 0.0231590 -0.7349900 0.0610560 -0.7143900 -0.7167900 -0.7120700 0.0957310 0.0425250 0.1098700 0.1088500 0.2874700 0.0153820 -0.7020300 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 7.9564981 12.8833902 7.6977161 9.4742618 3.0442717 11.1996544 3.1222751 -1.1256358 10.1085676 8.2943092 NA 6.8911567 4.0036292 10.4260571 9.5485412 6.1781290 6.6817037 8.7661327 8.9105225 12.5932028 9.3893390 7.0935179 9.6225417 1.1962923 9.1481445 9.5352361 3.7323343 -0.1256358 10.6145513 3.3979125 12.8776033 11.4826037 7.2837394 9.5590975 8.5782523 11.0386273 2.1962923 0.8743642 2.0442892 3.2666666 10.2477578 11.7737058 9.5209076 3.6292400 8.6463665 9.3368511 10.0042758 5.5747888 10.0480261 -0.1256358 11.1513456 0.4593267 4.0838005 10.0874228 6.5323466 4.7323289 9.2384836 7.8799734 9.3265902 0.4593267 14.4654914 -0.1256358 10.9427913 -1.1256358 6.4212435 4.3337815 7.7166994 9.3949677 13.923073 6.421244 8.175845 13.646560 9.334805 10.516852 12.069413 10.359675 8.452137 10.037999 12.297859 11.430376 6.300614 9.950496 3.574792 7.707239 9.602269 10.4555495 6.3006143 8.3151971 9.5808449 8.7812394 10.3922742 5.7569912 5.9723802 11.3634442 7.1872323 2.0442892 5.6158165 7.2618495 6.8911567 10.3626911 7.4365916 11.4303759 6.2406711 5.5037049 8.0316957 11.4301363 10.5911683 9.1411354 10.4342039 4.9828750 -0.1256358 9.2681040 6.0935179 6.2052654 8.8672871 4.9828750 10.8021269 7.8855762 7.3581650 14.2417636 10.1798407 8.8372451 11.5892383 11.6744399 9.7909748 -0.1256358 TCGA-E2-A9RU 90 0 NA 280 breast stage iiic t2 n3a mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 12 black or african american not hispanic or latino 379.6.0 NA NA 4 NA NA NA 1 2 1 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.2943575 1.0157116 9.1190023 11.0632929 NA 8.6595707 NA 8.0601085 10.6371559 9.3994187 9.1329246 6.6595707 7.6006771 10.1398358 5.5804983 8.0006074 9.5715818 9.6402053 6.0157139 4.0157116 10.8008945 11.4734373 12.3568626 11.4819609 9.5587463 9.9592061 4.3849478 10.1128687 NA NA 6.3849478 8.9206000 13.7101449 6.2381066 12.4922919 11.2182465 11.3034268 6.4194361 3.3376397 7.5444939 7.1722185 7.4531200 6.8230691 12.4391806 NA 10.9400322 13.5063147 5.1856406 9.9660274 10.0943101 8.0853880 7.1586723 1.0157116 14.9076681 8.9582291 -0.5691795 9.4008579 NA 2.2381143 9.0491374 9.4279315 7.7161541 9.5766841 8.0343781 9.6365452 NA 9.6810504 10.4342699 7.6205769 6.1856386 7.2949377 10.2723164 14.4975559 5.4368248 8.8337639 9.6547536 7.7253724 1.0157116 2.4307402 6.8486042 7.3614894 10.0782105 -0.5691795 5.6595707 7.3194951 10.3057333 10.7481646 6.3614894 3.8901840 4.7161569 9.1654615 11.6380714 1.4307670 13.6315740 4.9853410 5.9699103 11.3961755 13.4057938 11.5102367 7.9582291 10.6019288 10.6822344 9.5035545 9.8570166 1.4307670 9.5182149 11.8483408 11.3130129 NA 10.2871774 8.5754103 -0.5691795 2.0157116 8.1449977 10.1389736 8.7594268 8.6230449 15.8542783 10.2030665 8.5182149 7.0528039 2.4307402 15.3871054 10.5068995 12.2723163 11.7504241 9.3133951 8.9543138 6.2121121 9.7107222 0.0000000 0.3390100 0.7575700 -0.3752700 1.0034000 -0.3572600 1.0983000 0.5217100 3.6569000 3.6569000 2.3878000 1.8040000 -0.1098500 -0.0463120 0.7051300 2.2619000 1.2830000 -0.1139100 0.5709500 -0.2605900 2.2495000 -0.0951200 0.0024969 -0.1509300 -0.2365500 0.8647300 0.8647300 -0.0559030 0.5804100 0.0144700 -0.0016629 -0.0505060 -0.3848100 -0.0874470 -0.0992090 0.2587100 0.9567200 -0.0646430 -0.6178600 -0.0042929 0.4799300 0.4386800 -1.0380000 0.3137000 0.2893500 -0.0738770 -0.0637030 -0.0463120 -0.0463120 -0.1375500 -0.9702500 -0.1139100 -0.3901800 -0.3901800 -0.0066321 -0.3218200 -0.0672770 -0.3685800 -0.6495900 -0.1509300 -0.2873900 -0.9690300 -0.0875790 0.5804100 0.5899100 -0.2828700 0.000 0.000 -0.643 -0.643 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.631 0.000 -0.287 -0.287 0.865 0.000 0.000 0.732 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.157 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 0.000 0.000 -0.643 -0.643 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.631 0.000 -0.287 -0.287 0.865 0.000 0.000 0.732 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.157 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 8.0417769 13.3906634 5.2636429 8.7345328 1.0157116 10.3900295 2.6006741 NA 9.9920399 8.9365634 NA 7.5075679 6.6595707 11.0578298 10.0646553 5.3614877 5.1031787 8.7772658 9.2887330 12.0306648 9.2200085 5.8230691 10.6816425 1.0157116 9.3979783 9.6365452 2.2381143 NA 9.8664223 4.2381066 13.5711025 12.5980133 7.8901834 9.1637674 9.9355710 10.7487298 2.6006741 1.4307670 NA 5.1031787 9.3922017 10.4812809 11.1624952 1.0157116 8.1814922 9.0380822 10.0889635 4.9226070 10.0390068 NA 8.5048933 0.4307135 3.1311944 9.9272663 7.9527057 2.2381143 9.0925301 6.9929938 5.8570156 4.1856366 14.7286355 -0.5691795 11.3473779 NA 9.2202857 3.4307536 7.2762417 8.2153869 13.052552 8.019467 7.877835 12.492292 9.153559 11.501544 12.439181 10.422274 9.876801 9.198936 12.257300 11.586203 7.361489 10.323295 1.430767 7.008181 9.831631 10.1864741 5.6205776 8.6181039 7.8736957 8.4290322 8.5624031 5.6975375 5.4531192 11.4819609 11.0800082 2.2381143 9.6511303 9.1607296 10.1931340 9.7794802 8.0782106 11.5680634 6.0746082 3.0157116 7.7161541 10.0297349 10.1914720 8.7299599 9.9650548 5.2887314 4.3849478 8.6247699 6.1449967 3.3376397 10.7481646 7.2251679 10.1058269 9.1654615 8.4447722 15.1163768 11.2949381 9.7816912 12.3596404 10.4648631 8.9987080 -0.5691795 TCGA-E9-A1N3 70 0 NA 0 breast stage iiia t1c n2 m0 2-10-2014 female 2010 NA NA mixed histology (please specify) yes 7 white not hispanic or latino 136.49.0 NA NA 2 2 NA NA 1 4 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 8.343418e-08 11.8450586 6.7250390 8.3163988 11.3823736 0.1742786 10.9713452 1.6337102 10.3588571 11.9232183 7.9816466 10.2811817 8.0811825 9.4257742 8.1443977 8.1415181 8.8154403 11.3884590 9.6182713 7.2537766 1.8747183 10.7903810 9.7095670 13.2299131 11.1222938 9.4620040 10.8233233 2.6978628 10.1109297 -1.8257214 4.9157599 7.6761292 13.1330709 13.8123882 7.4939635 12.6822721 12.6668960 8.9208060 7.0901707 4.3641171 4.7288783 8.3616438 8.0736489 7.6939281 13.8302696 4.3837458 8.3035748 14.5899675 1.4962067 9.8105040 11.5516378 7.9816466 8.5719665 0.4962067 14.1377112 9.5815595 2.6978628 7.8217504 -0.8257214 3.6005552 10.0504248 10.2166350 10.7396319 9.7526643 10.1551453 8.9408207 5.0569346 12.4431261 10.0622738 6.6899910 8.1742916 3.4222195 11.6802273 14.2076932 9.5078999 12.0214469 11.4834838 7.7816220 NA 6.0991037 7.5942522 9.1931873 9.9212258 -1.8257214 4.0322684 7.4871744 9.4831995 10.9404065 3.2186882 4.5318430 4.3641171 10.3186313 11.7955423 1.7592411 13.2815088 6.7403461 8.1911002 11.3022860 9.1813190 12.9983057 7.5815591 10.7431979 10.5433437 10.7213187 11.3636530 5.4410784 8.3278436 11.4839102 11.2950156 -0.2407589 9.9896751 8.9751917 3.1284914 3.6045814 9.7240764 10.2925839 10.3379414 8.6510381 15.0132371 11.1118494 9.5340412 8.2564408 2.0811692 16.0195612 8.6701467 11.2532764 10.2864054 10.1679378 8.6681471 8.1658135 10.2802428 0.00597000 0.00597000 0.00597000 -0.00719580 -0.00719580 -0.00277070 0.00000000 0.00305220 -0.00470790 -0.00163570 -0.00163570 0.00027728 -0.00318590 -0.00263220 -0.00443120 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00638710 0.01195800 0.01195800 0.01195800 0.01181800 0.01181800 0.01181800 0.00972760 0.01056400 0.00597000 -0.00903720 -0.00719580 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00899060 -0.00470790 -0.00470790 0.54259000 0.54259000 -0.00163570 -0.00152430 -0.46344000 -0.00110870 -0.00110870 -0.00263220 -0.00263220 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00638710 0.00652620 0.01195800 0.01195800 0.00235810 0.01181800 0.01181800 0.00972760 0.00388540 -0.47064000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 7.3366833 10.3849631 6.1515707 8.4962199 4.7742020 10.6850559 0.7592411 -1.8257214 8.5384264 6.8360693 -1.8257214 7.0362473 2.6337334 10.4995972 8.9912752 0.7592411 7.1371879 9.4174656 12.9884736 10.9231135 10.0699502 8.4746441 10.0935274 2.4962322 10.7291203 8.9408207 3.0322772 0.1742786 10.7267206 3.8747281 12.7502445 12.1323913 7.0569346 9.9980570 8.3479690 9.2531098 5.9022111 -0.2407589 0.7592411 7.0751582 9.6875258 9.9900753 10.0815580 4.3837458 9.1907867 7.0538749 10.5794331 4.7742020 9.5601542 NA 13.6727358 1.3442036 10.4689125 9.8463015 7.4957463 3.3837458 7.6919612 6.9556511 7.1342939 -0.2407589 13.6553027 -1.8257214 11.4371206 -0.8257214 8.6490118 4.8885387 7.7926771 9.9666753 14.107734 5.393461 9.209778 12.682272 10.692945 10.921226 13.830270 13.747673 8.998335 11.002031 12.300674 11.413741 9.193187 7.540614 -1.825721 7.478072 10.429615 10.9880729 7.7076214 8.6337233 8.9499020 9.0252597 10.1158603 5.2077133 8.6661448 11.1222938 6.6255028 -0.8257214 2.7592624 7.0766970 9.2410536 9.8369600 9.5471567 9.3303749 11.6373051 4.4222195 10.7396319 10.0796786 12.3566084 8.5029666 10.7634747 9.2867312 -1.8257214 9.4713913 8.0929463 4.4780723 10.9404065 5.0446564 11.0851218 10.3186313 7.4293205 13.9995981 10.6444422 10.2785628 12.6668334 9.1284880 10.3641163 0.9816335 TCGA-E9-A1N4 41 0 NA 584 breast stage iiia t2 n2 m0 2-10-2014 female 2010 NA NA mixed histology (please specify) no 4 white not hispanic or latino 124.53.0 NA NA 2 2 NA NA 3 4 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 2.224912e-07 11.0700838 6.9582441 6.5162406 10.8199713 0.5658896 10.7786260 0.9809758 10.3177500 11.4257205 10.1904178 9.5621649 7.6883238 8.2755854 8.9264084 6.2477510 8.8003454 9.8354433 10.4534014 8.5422522 2.1508846 10.3324559 9.9485509 12.4179362 9.5254460 10.0416604 10.3407140 5.6248203 10.8023378 -0.4340130 2.0684301 10.5242380 11.9358877 13.1079512 8.6075863 11.8883246 12.4178711 10.6626421 6.6103206 3.5355553 5.4239075 8.4768195 10.5357931 6.6248203 11.9889553 3.2288956 11.2320030 12.4426997 2.6814043 9.2651523 9.3107607 5.2193699 7.0604495 0.5658896 14.6646691 9.6338093 2.6248262 6.8727487 -0.4340130 5.8201687 10.2073767 10.6094100 10.0992567 12.0236498 10.1262597 9.7806508 2.0684301 11.8582486 9.8166202 5.6814043 7.9453051 0.3028747 9.8272384 14.9016662 7.4705718 12.1264190 11.4161138 9.3324558 NA NA 6.5808766 9.5799474 11.6880000 NA 5.4808112 7.1408359 9.7033451 11.5326727 6.9837791 11.2516978 5.8201687 10.7867083 11.7848937 -2.0191704 13.7239843 5.7688671 7.6796694 12.6679026 11.1837005 12.5963067 6.0999053 10.1583840 9.6670272 10.4580295 11.3576325 5.2193699 8.5517690 11.7348080 9.7291573 NA 10.1357825 9.4332057 NA 2.9064866 9.7088849 10.8459244 10.7086722 9.9767317 14.4326102 10.2312628 10.1147488 8.3040190 5.3296941 15.7392202 4.3903581 12.0636956 11.9135483 9.2698306 9.0637788 8.7080341 9.4840547 0.0133530 -0.0037264 0.0054273 0.0151680 0.0151680 0.0244080 0.0124370 0.0165650 -0.6400100 0.0098073 0.0098073 0.0090312 0.0012744 0.0061090 0.0027745 -0.0033988 -0.0033988 -0.0066432 -0.0066432 0.0141900 0.0078965 0.0125950 -0.0482070 -0.0482070 -0.0482070 -0.0916840 -0.0916840 -0.0916840 -0.0216400 -0.0506410 -0.6237000 -0.6032200 0.0151680 -0.6542600 0.0244080 0.0174040 0.0174040 0.0165650 -0.6400100 -0.6428200 0.0109820 0.0078564 0.0146090 0.0059700 0.0059700 -0.6445200 -0.0247980 0.0061090 -0.0016629 0.0015224 -0.0033988 -0.0066432 -0.0066432 -0.0066432 0.0141900 -0.0093052 -0.0126530 -0.6798000 -0.0482070 -0.0482070 -0.6504500 -0.0916840 -0.0916840 -0.0177940 0.0000000 -0.0600760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.637 -0.637 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.637 -0.637 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 8.62842294 14.16878043 5.20978476 8.80353542 4.68140429 9.18247580 3.86361143 NA 8.16459976 7.15339192 NA 8.32786607 0.30287467 10.60278737 9.60758609 -0.01902419 9.52785894 9.35871713 10.77375474 10.36250737 9.06968633 7.88635139 10.67575763 3.33850999 9.62932201 9.78065082 8.84747051 NA 10.75863073 3.06843005 13.23000380 12.34071400 8.15214133 9.93406957 8.62301598 9.20737654 0.56588958 2.88785666 -0.43401296 2.22888024 8.69692650 9.73167135 10.30795566 4.15089269 5.67466120 6.55082065 10.33411124 6.27098298 9.74749331 NA 11.14697056 6.44857063 4.00333238 9.57250091 6.94761356 4.87578006 9.64984948 8.87046829 6.44039580 -2.01917038 13.79243949 0.78835162 10.20797860 NA 8.50452625 5.82645442 8.05108547 8.86284313 12.007916 6.617589 9.783077 11.888325 10.629547 10.842051 11.988955 12.045960 9.335214 10.985185 13.178258 10.884470 9.579947 8.342908 1.788310 7.331904 10.342360 10.7709056 4.8011431 9.3352139 8.4847903 9.3379666 9.9148579 7.2709830 8.0470535 9.5254460 4.9582441 1.3028747 3.0684301 7.3019680 10.5949840 10.3627777 8.6586842 8.0143877 14.0220032 5.6883231 10.0992567 10.4584698 10.4808103 9.9267741 10.5649874 9.6917709 NA 9.3084159 7.8197429 6.0143865 11.5326727 7.4072295 10.9907931 10.7867083 7.3861056 13.8762320 11.1249853 11.1237097 12.9581102 9.7995467 9.5220610 0.5658896 TCGA-E9-A1N5 45 0 NA 1120 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA mixed histology (please specify) yes 2 white not hispanic or latino 120.48.0 NA NA 2 2 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 6.674735e-07 1.39057e-07 11.2092090 8.6269472 7.2131081 11.4638083 NA 10.4683332 NA 10.0395092 11.8230174 11.7173700 9.6920160 7.3545280 9.0266128 9.6377004 5.3718063 9.3566993 10.4307000 9.5089194 7.4753443 5.0018563 11.1782409 10.1139152 13.1423522 11.6323339 8.7427012 10.5084313 7.0184083 10.4409684 NA 2.1494220 8.9653309 11.2585190 12.6583091 8.2855506 11.6403762 13.0156625 10.0576397 7.1443962 3.4389182 6.9510329 8.4971585 7.3588674 7.9249330 12.8720317 1.5644757 10.2256357 13.2661910 5.8374690 9.0248527 10.9434687 8.0853976 6.7410395 0.5644269 14.1239197 10.9685286 3.4389182 8.6215406 NA 5.1494138 9.6963084 10.7082598 9.7876488 10.8064346 9.4036552 10.2486156 1.7868472 11.5870504 10.5498190 7.2462751 7.4793349 0.9795132 10.7022964 15.1779723 8.2359807 11.3315324 10.4607838 8.5398218 1.9794766 3.4389182 8.6251474 9.4109866 11.5343176 -1.0206331 6.8923777 7.7108078 10.0893195 11.2046963 7.4265726 6.7209556 5.0238852 9.8147499 11.7910643 4.0669502 13.7026165 5.3193397 7.2368772 12.0452416 12.5694911 12.8486972 8.3588674 10.2059011 10.9120728 10.5786160 11.3460844 5.2648929 8.9102263 11.9096718 12.0524589 NA 10.5340778 9.1865033 1.5644757 4.4097711 9.4813262 10.2901017 10.2089086 9.4813262 14.8373970 10.3143209 10.1469071 8.4182806 3.5644513 14.8828059 7.2786966 13.0301879 12.2440781 10.2855506 9.7956726 8.6051976 9.9942069 0.00000000 0.00000000 0.00000000 0.00208050 0.00208050 0.00708260 0.00194180 -0.01119800 -0.56165000 0.31274000 0.31274000 0.33001000 0.00013863 -0.00664320 2.03150000 2.23890000 -0.54885000 0.00124810 0.00124810 -0.07361000 0.55655000 -0.04834200 -0.54330000 -0.54330000 -0.01230000 -0.02671400 -0.02671400 -0.02671400 0.30330000 0.00000000 0.00000000 -0.00691950 0.00208050 0.00708260 0.00708260 0.00847430 0.00847430 -0.01119800 -0.56165000 -0.55807000 -0.00034502 -0.01436600 0.31274000 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00664320 -0.00664320 -0.54562000 -0.54994000 0.00124810 0.00124810 0.00124810 -0.07361000 0.03002900 -0.04108000 -0.49392000 -0.54330000 -0.54330000 0.03919500 -0.02671400 -0.02671400 -0.53713000 0.03524200 -0.16357000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 9.4853004 13.8477327 8.7343763 10.5583333 4.3718097 11.4332740 2.5644513 -1.0206331 8.2579384 8.3215638 -1.0206331 7.6896409 2.9794949 10.2625773 9.5273474 4.7343790 10.0018567 8.9752562 10.4353298 10.0696013 9.8473081 8.1889424 11.0381572 3.5644513 10.0327360 10.2486156 3.8374690 -1.0206331 11.6492598 1.3014121 11.8281118 11.9324121 8.1593981 9.4057537 9.0893196 9.1816127 5.4057542 2.1494220 0.9795132 7.6051980 8.7074095 8.5283107 9.6024558 5.3545297 7.8861392 6.8249791 9.4015537 6.5108702 9.5635119 NA 11.1266938 2.7868472 5.5340772 9.8002821 7.6819383 0.5644269 9.6928754 9.3326357 5.6799276 0.9795132 13.0939633 1.5644757 10.3014170 0.5644269 8.0101560 5.3370402 7.5531362 8.8218393 14.266307 6.693735 8.664237 11.640376 10.169313 9.811588 12.872032 11.242171 8.596038 10.957484 12.928768 11.337591 9.410987 8.690295 2.679919 7.149414 10.640376 11.329047 7.007395 8.914654 8.880356 8.334840 10.567815 7.575678 7.971011 11.632334 6.405754 2.679919 5.337040 7.773482 11.633454 10.286690 8.994904 7.965331 12.787548 5.665990 9.787649 10.828503 10.163124 10.305356 10.639039 8.786844 NA 9.106967 7.018408 3.503056 11.204696 8.356699 10.896861 9.814750 7.750978 13.405754 10.181000 9.640376 12.002203 10.956053 9.621541 2.886375 TCGA-E9-A1N6 52 0 NA 410 breast stage iib t2 n1 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white not hispanic or latino 117.51.0 NA NA 5 1 NA NA 1 2 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.72008784 3.97057760 6.88037575 11.03666308 -1.07369689 9.74795378 -1.07369689 9.95615716 11.68440298 7.40191286 10.15860073 6.57003631 8.18827481 9.34614005 8.86134471 9.35767736 9.96029088 10.67479191 8.07592673 2.38562430 10.79577360 10.69601764 14.47439963 9.12462487 9.49508592 10.78649083 4.68106689 10.95753638 0.51116439 0.92615127 8.20926814 10.65749880 12.19135525 8.77166971 13.80480549 12.48220676 10.52516273 5.54088901 -0.07384873 6.04512184 8.16458467 11.77460708 9.56280432 12.33304910 -1.07369689 11.18651127 13.50254601 NA 9.61146289 11.87691789 8.41401965 5.80882263 -1.07369689 13.90958803 8.21158221 -1.07369689 8.25933511 NA 3.83307224 9.71408235 10.45218985 10.02157675 11.24444013 9.58349821 10.53304759 3.09611002 10.86942713 9.95270325 5.78416107 6.59860490 1.73352789 10.35976526 15.66243634 8.15682484 11.31688615 10.97806840 8.85543818 1.73352789 1.73352789 7.27490831 8.62661946 12.61038049 0.51116439 6.76538357 7.05030143 9.79036593 10.11353187 8.60389928 5.41803136 5.19296739 10.11908897 11.99931716 3.31849039 13.48424167 5.11600287 6.82099711 12.27891292 13.40254627 12.48040886 8.17884508 10.36704895 11.15740094 10.12672899 11.00599788 4.41803474 8.48651247 11.46969498 9.64299915 NA 10.77127775 9.77245364 -0.07384873 2.24953636 9.64471272 11.44900648 9.89196410 9.17884508 15.02052554 9.59683603 9.81416185 8.43793222 1.92618923 14.67892627 9.35663221 12.37996483 11.62618590 9.84205910 9.14292571 7.72384112 10.62052456 -0.3527700 0.5688100 2.9454000 -0.1747400 0.0000000 -0.1423200 0.1450300 -0.1527200 -0.1527200 1.0519000 0.4756400 1.1562000 0.0956530 0.3931300 0.0820430 0.0820430 0.0820430 1.2272000 0.1758800 -0.3297100 0.4087800 -0.2043600 -0.3871000 2.5577000 -0.4894200 -0.1327700 -0.1327700 -0.1327700 0.1477100 -0.2764300 -0.3527700 -0.1503600 0.0000000 -0.1522100 -0.1423200 0.1450300 0.1450300 -0.1793700 -0.1527200 -0.2803700 0.7015700 -0.1542600 -0.3975300 0.1043900 0.1043900 0.1043900 0.1043900 -0.8994700 0.3832000 0.0820430 0.0820430 -0.1374200 0.1758800 0.1758800 -0.3196100 -0.5016200 -0.2115600 0.0731150 -0.3871000 -0.4667400 0.1222600 -0.1327700 -0.1327700 0.1477100 0.0852210 0.0029133 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 0.406 0.804 0.104 0.104 0.207 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 0.406 0.804 0.104 0.104 0.207 8.3773910 14.7729434 5.0961058 10.2526093 NA 11.1389801 1.5111644 -1.0736969 7.9841718 9.3098840 NA 7.9251651 4.0961016 10.9353086 9.1098152 1.2481097 7.0657306 9.5251627 9.6651165 10.8952065 9.4602978 6.9814623 11.3680865 1.9261892 7.6438562 10.5330476 7.9402002 NA 10.4180328 1.5111644 12.2253878 12.2661689 8.6760491 9.3545399 10.1392840 9.4979325 4.8803770 1.9261892 0.5111644 6.4180331 8.7950022 9.2424613 9.1633898 3.0136409 9.6824692 7.5700363 9.7833833 6.7270791 9.1764781 -1.0736969 10.8785570 3.9705776 3.2481097 9.6743222 5.3008705 1.9261892 8.8330703 8.5861755 4.7590706 4.4180347 14.2036488 1.2481097 11.3158111 NA 7.1307507 3.6810669 8.1953063 8.3773910 11.7955808 7.0910862 8.5167669 13.8048055 9.5618888 11.7831888 12.3330491 11.7146942 9.1729202 11.0337238 13.1175475 9.5879579 8.6266195 10.6021368 0.9261513 6.8390690 11.3688641 11.8659426 6.1453473 8.9374071 9.7543163 8.3482444 11.0000770 6.6266202 9.4893759 9.1246249 7.5445650 0.5111644 6.5408890 8.8355180 11.4872290 10.4701782 8.2185012 9.6743725 10.3830475 4.0961016 10.0215767 9.7009668 10.9726217 10.3644518 10.8825559 9.3876592 7.7140820 9.6577365 7.4376164 2.6266260 10.1135319 9.0998569 10.9996519 10.1190890 7.3649716 13.0761650 10.2892194 10.3722292 12.3182288 11.4175318 9.4556104 1.7335279 TCGA-E9-A1N8 48 0 NA 365 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5.562279e-07 5.562279e-08 12.2859494 2.2317396 7.9919730 11.5201569 -1.0901885 10.3470559 1.2317396 9.2463306 12.1788046 10.1777812 9.7932310 8.0922185 8.8596506 10.1015003 7.1672124 9.0104864 10.2684752 10.5568327 7.9596728 5.4489835 11.0101578 11.1055039 12.8953992 12.8072914 9.4489829 10.4976016 3.6102630 10.7351804 4.2317550 0.4947740 6.7801893 12.1315622 13.4226262 7.1434434 11.2940681 12.0048914 11.1350315 8.2673761 5.8985083 8.2181631 8.2518989 10.3287308 10.5536803 8.7236053 NA 8.8611086 5.6102630 10.0891112 9.3220976 10.6244988 7.2585519 4.4016782 -1.0901885 12.9666548 8.3465355 2.4947740 7.9542184 2.3692431 4.3360905 10.3107034 11.9668004 8.7268077 9.3885936 11.5229228 9.2946079 10.1981134 11.9949645 11.0636927 6.9812864 6.5536800 5.0797493 12.5271767 14.4265705 7.9444028 11.0461744 10.8468300 11.3176229 2.6102748 2.3692431 10.1512114 9.7631337 11.2235574 NA 3.4333868 7.1766110 11.5291270 10.9501138 5.8756081 5.4176196 5.6647104 7.8106912 12.1104162 2.0797365 12.3569073 5.8167149 8.0052209 11.5835748 11.1079621 13.2445163 7.4333860 11.4997092 11.4994752 11.5737179 11.8591036 5.4176196 9.5707113 11.8854929 9.3506933 NA 10.1168384 9.1917541 0.9098115 6.6375407 9.6232106 8.8435147 11.4375454 9.2407410 14.2603144 11.6952765 8.8698261 8.2739587 0.9098115 10.4629733 7.0747313 12.3260938 10.8759689 10.2546747 11.0012594 7.5963247 10.2609400 0.1434700 0.1739200 0.1521600 0.2165300 0.2188300 -0.7840400 0.5215300 1.1407000 1.1449000 -0.7945300 -0.7945300 0.2435800 0.0000000 0.0000000 0.2313200 0.2313200 3.6569000 1.5546000 -0.0182160 1.3610000 -0.7980300 0.1462100 -0.8141300 -0.8106300 0.3723300 1.1619000 0.1029300 0.1029300 0.1541200 -0.0273980 0.1434700 0.0775740 -0.8053700 -0.8108600 -0.7903800 -0.7980300 -0.7980300 1.1407000 0.2085500 -0.8746300 0.2166800 0.2179100 -0.8481100 -0.0088526 -0.0088526 -0.0088526 -0.2236700 0.0000000 0.0000000 0.2313200 -0.8097200 3.6569000 -0.0182160 -0.0182160 -0.8652300 -0.7980300 -0.8141700 -0.4823900 -0.8141300 -0.8106300 0.3156200 -0.8304900 0.1029300 0.1541200 -0.7162200 -0.7402800 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 6.3444522 12.5718248 1.2317396 8.9906415 3.1216123 13.0733951 1.2317396 -1.0901885 9.2999930 10.8759689 5.9651055 8.2294961 8.5928188 10.7001726 10.5263729 3.3021435 4.2317550 10.7022077 7.8197174 8.9210513 9.1357424 8.5822493 10.2712196 NA 9.8698259 9.2946079 2.3692431 NA 8.8828038 5.8640202 13.2112488 12.8519720 6.7171788 9.6033111 8.8669262 10.3245093 6.5097370 1.4947740 -1.0901885 4.5822489 9.8398222 9.2552293 7.3936401 11.3056259 9.4048695 5.2673747 9.6993576 5.9432462 9.5945726 1.7171664 13.0466550 2.3692431 3.6647104 10.3996971 7.3695424 0.4947740 7.2892028 6.9705201 3.2317550 0.9098115 14.4014580 NA 10.9589919 1.7171664 8.9651063 5.0183493 8.0570289 6.1192773 13.001660 8.997287 6.517154 11.294068 11.519695 10.543727 8.723605 12.558294 12.793282 10.993303 12.830270 12.047936 9.763134 6.981286 7.297842 8.629213 10.236254 11.265175 6.869826 8.537358 10.252454 9.154188 10.743299 4.637744 6.610263 12.807291 10.535076 -1.090189 10.121104 9.348460 13.697574 11.033299 6.336089 9.537358 8.744295 3.494787 8.726808 10.114395 11.186530 11.492672 11.201570 9.258552 NA 8.719158 6.069696 6.658017 10.950114 8.431424 11.454064 7.810691 8.872966 15.052430 10.140445 9.732395 12.698950 11.693027 9.639445 -1.090189 TCGA-E9-A1N9 58 0 NA 399 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) yes 0 white not hispanic or latino 120.48.0 NA NA 4 1 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.352921e-06 2.42832e-07 11.4565145 7.9556470 8.8458836 10.8935571 1.4478436 10.2297585 NA 10.5251133 12.0888505 6.3785897 9.3942715 7.6766715 9.9072841 9.3016818 6.5067463 8.5246683 10.7017000 10.2860059 7.5211018 3.0328238 10.1448200 9.9330109 14.3287752 10.3587450 9.8329958 11.1337693 5.8963130 10.9645375 -1.1370131 0.8629076 8.7965806 12.4785196 13.0196051 7.1757731 11.9036934 12.1553554 8.7787694 6.6043575 2.8628878 7.3825263 9.1712291 8.3884109 7.5598573 13.0215786 -1.1370131 9.4885988 12.8313768 6.5908101 9.0403095 11.2775752 7.9921730 5.3864523 -1.1370131 12.3805631 8.1436378 -0.1371717 9.2870562 10.2165882 4.8852571 9.8621854 10.7607354 10.0452843 11.1834085 10.6810727 9.4831098 2.7697717 11.7783959 10.4088198 6.5771357 6.7394066 10.7282366 11.6258948 14.5957464 7.4294770 11.4174788 12.0767536 8.9463694 2.0328061 5.2722808 7.9397056 9.4544124 11.2080180 0.4478436 9.1552116 6.5633290 10.2390154 11.4581475 4.3547413 5.9181715 4.3223248 9.9031798 12.5171904 2.9503564 13.0045980 3.5633290 7.2422681 11.5498282 12.0184988 12.7094577 8.1780393 11.2573527 10.6838667 9.9019392 11.5211015 5.5211010 7.7177587 11.8602459 12.4628028 NA 10.1932467 9.0403095 1.1847881 3.5471537 9.5058443 8.8727186 10.0971086 9.2487523 14.3102316 10.1143724 9.1214561 6.8286747 2.6702512 15.4621055 8.6442496 12.7950125 11.8741172 10.7577078 9.8236159 8.8039377 10.1873575 -0.24727000 0.48045000 0.48045000 0.26514000 -0.03626500 -0.00581400 0.51842000 0.39263000 0.53925000 3.21400000 3.14720000 1.61250000 0.27300000 0.27300000 -0.14207000 3.32620000 -0.23826000 1.62730000 0.42016000 -0.28667000 -0.13807000 3.65690000 1.54160000 -0.00097017 -0.00097017 1.08310000 0.48630000 1.28340000 0.23876000 0.32109000 -0.24727000 -0.30193000 -0.11326000 -0.01271300 0.26702000 -0.01409000 -0.02821800 0.39263000 0.53925000 -0.01174900 0.22769000 0.02370600 -0.93622000 -0.19087000 -0.19087000 -0.19087000 0.20717000 0.27300000 0.27300000 -0.61316000 -0.31105000 0.58327000 -0.23533000 -0.23435000 -0.21305000 -0.13807000 -0.58235000 0.00000000 -0.31937000 -0.00097017 -0.08824200 -0.11221000 -0.01904000 -0.27906000 -0.58520000 -0.32333000 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 -0.177 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 -0.177 8.775779 12.600137 6.862890 9.622778 4.184820 11.903865 1.862908 NA 8.386452 9.109631 5.769780 9.035318 5.305832 10.233577 9.960264 3.447857 9.088097 9.817086 9.116737 9.308939 9.637941 7.717759 10.772408 1.184788 8.627761 9.483110 3.950356 1.670251 10.202183 3.322318 13.018104 11.838738 8.565063 10.634379 8.374643 9.378590 5.862890 1.447844 NA 3.563329 9.400108 9.071124 9.750111 4.535313 9.161147 5.386452 10.241185 7.148293 9.751633 -1.137013 12.084779 3.769782 4.563329 10.041449 5.056267 3.769782 8.827231 7.695780 7.022762 2.447844 14.161919 1.184788 10.685062 NA 8.960922 5.851574 8.508548 8.597600 12.450235 7.915458 9.018973 11.903693 9.678273 10.085081 13.021579 16.700228 8.667021 11.740558 13.091107 10.383018 9.454412 8.911377 3.032824 8.110817 10.918850 11.7580866 7.5031348 8.7802622 9.2807425 9.5877023 11.2827422 6.4174796 8.4117118 10.3587450 5.3706839 0.4478436 8.1757731 8.4254757 11.0415548 10.4136368 8.3687016 8.5103484 11.2324874 5.7208722 10.0452843 9.7455330 11.3071284 9.3795750 10.7527742 9.0747784 10.8720188 8.2390586 7.1803030 6.0820575 11.4581475 6.7083804 11.2688292 9.9031798 7.5975997 14.1076611 10.5080981 10.0202369 11.9879805 11.4881422 9.8401699 0.4478436 TCGA-E9-A1NA 58 0 NA 1112 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) no 0 white not hispanic or latino 117.51.0 NA NA 1 3 NA NA 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150798e-06 5.550446e-07 13.0557641 4.4564251 4.6104638 11.3471413 1.1140338 9.7313715 1.4765891 10.6280448 11.5032824 11.8682070 8.9791056 7.2521242 8.8419558 9.6133117 7.3861651 9.5617089 9.3366576 10.0900878 7.3179073 1.3066705 9.6030230 10.0732092 14.4693667 11.0010382 8.6576196 11.2555950 5.4256204 10.1367993 -0.6933878 0.8916525 8.5664236 12.5680407 13.2308897 7.8361110 12.0339626 12.5128553 9.7064922 8.5628888 6.2491950 6.0346009 8.5063528 9.3394149 7.8516447 11.5608232 3.6642325 10.5717092 14.2934779 5.1646616 9.1010961 10.2116912 5.8065251 6.3123058 -0.6933878 14.0131906 9.7185514 3.2135650 7.5474714 NA 3.7661075 9.7960266 10.2557775 9.2623303 10.6238103 9.7080932 9.7722468 0.3067289 10.6401152 10.2857482 6.3510753 8.4138974 2.8302350 10.3667007 14.3011001 8.1475840 10.7321585 11.5266051 8.5978511 3.9791016 6.6989977 9.2925223 9.1592099 12.1674763 -0.6933878 6.0209266 7.8025351 8.7661118 11.3568691 6.1646616 6.4513381 6.5209989 9.3828278 12.1196598 3.4359619 13.1832452 5.5258496 6.7075593 11.1582342 14.5354990 12.6847042 7.9213899 9.8268079 10.8890575 10.1879969 11.2318638 5.0481490 8.8897631 11.1965645 8.0088532 -0.1084253 10.5447865 8.8322011 3.0615688 0.8916525 9.4921753 10.3445704 9.9706831 9.3781427 15.4867060 10.0451949 9.5456821 7.7824138 2.0071237 13.9951765 6.0071192 12.0013647 11.6298759 8.3359678 9.6178610 7.8822193 11.3588917 -0.2911800 2.3799000 0.6097100 0.0643680 0.0341130 0.0280600 0.3987800 0.9175500 -0.7024400 -0.0015243 0.0258120 0.6840300 0.0225850 -0.0346310 -0.6632800 0.9081500 0.7147100 0.6144400 -0.0324500 0.0199230 0.7275400 -0.0495590 -0.0496950 -0.7094400 2.5837000 2.0119000 0.6535100 -0.0713380 0.2179100 -0.3275100 -0.1050000 -0.6917800 -0.7066600 0.2807400 0.1213800 0.8677100 0.0167050 -0.7445500 -0.7024400 -0.7273800 0.8884600 -0.3337600 0.0225850 -0.6968500 -0.6903300 -0.6903300 0.6708500 -0.0346310 -0.0467180 -0.4088200 -0.6872400 -0.0139530 -0.3456100 0.6795700 -1.0217000 0.0000000 -0.6982100 -0.0083005 -0.7153300 -0.7066600 -0.3418200 -0.0959060 -0.4143200 0.0116790 0.1617500 -0.6901500 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 8.6172930 14.0282068 7.4462314 10.0058189 2.0346031 9.6364767 2.6286103 NA 8.4977397 7.8953947 NA 8.3261598 6.2433187 10.7506598 10.2695764 1.3066705 9.2803778 8.4487874 6.4816057 9.9296472 10.9535203 7.7118218 9.8105061 3.1140338 7.8497122 9.7722468 1.3066705 -0.6933878 11.4484682 1.6285870 12.3804035 12.8904095 7.8322014 10.0644869 9.5746374 9.3200031 5.4152043 3.5546134 -0.1084253 4.9648930 9.1188575 10.2996187 9.7203082 2.6286103 8.2813672 7.0945834 9.5462789 5.3727711 10.2928779 NA 10.5880309 4.1646576 2.3066705 9.7173172 5.0276406 3.2135650 9.7470305 8.9396756 5.1893225 3.5161286 13.8183712 -0.1084253 11.9572833 NA 7.7266405 3.7985379 7.9103069 8.6719093 14.704545 7.655408 8.413897 12.033963 10.420188 10.522820 11.560823 12.259695 9.387092 11.030981 13.756506 11.415695 9.159210 8.618429 1.891652 8.507579 11.439662 10.6252232 5.6375958 8.5149148 8.9958047 7.6598268 9.4999716 7.8282806 9.1124241 11.0010382 7.0036483 -0.6933878 5.1395718 8.0164880 10.3123049 8.8322011 7.1553030 9.8859963 12.4172452 4.7824138 9.2623303 10.4693863 10.7300589 10.6473650 10.0388478 8.7620076 4.2374184 8.8196184 6.8951705 5.1268573 11.3568691 8.9595253 10.2266610 9.3828278 7.9287321 15.0219452 10.3818252 9.7676480 11.7195148 11.0149021 9.1498162 2.3941300 TCGA-E9-A1NC 61 0 NA 1203 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) yes 1 white not hispanic or latino 136.49.0 NA NA 4 1 NA NA 2 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352921e-06 3.815932e-07 11.75253837 5.38026537 5.79119936 11.52190960 -0.07917317 8.91518863 -0.07917317 7.94874100 10.01028570 10.75649094 9.15325612 7.49448282 8.33234632 10.89094115 6.77258379 8.25622568 8.93625042 10.05397745 8.76632516 6.31315332 10.14965390 13.12425974 12.22817838 10.38282621 9.36274186 9.71768602 7.94042578 9.57009136 6.89811522 -0.07917317 7.78192225 10.20623747 13.05566264 7.55745987 11.87193780 11.11220295 11.32304795 5.20623686 0.92082683 9.82997828 8.38640185 8.61606358 7.86627932 4.59325815 NA 12.39454102 8.28715735 8.78811405 9.92785558 10.49400902 9.34500155 5.77881571 -0.07917317 16.37638419 13.23821748 1.50578933 8.90240255 NA 6.36377908 9.46579963 9.95563422 8.85305000 8.26068530 9.16162647 11.58550477 4.77881833 9.26290995 10.52446160 3.00828967 7.51329255 0.92082683 5.97611843 15.91222424 6.55840234 9.50297716 8.63164163 9.77024035 3.56469521 1.72818175 7.23824804 8.46579983 9.33446325 1.24275492 5.41268670 7.61432188 11.08919396 10.55927116 6.01886781 6.49826363 6.73461615 9.53186000 11.82075856 3.44440204 13.47344433 4.82772758 7.02412350 12.23144804 13.22490131 12.36895156 8.61953993 10.66986662 10.35650556 9.94905220 9.56649363 3.09075183 8.44439707 11.47853828 10.43456287 6.03977667 10.42763864 11.02608905 2.09075183 2.66284352 9.42068113 10.65003113 9.56649363 8.18527785 15.26464556 10.63893995 8.76318547 6.33868825 3.38027230 13.38173905 7.71525093 12.66661461 11.85268079 8.91801466 10.53370379 6.94874100 9.96961503 0.02132300 0.02132300 0.34064000 -0.38739000 -0.00636680 -0.38291000 0.05979400 0.09754200 0.00485790 -0.00110870 -0.00110870 0.54118000 -0.01119800 0.01964300 0.00041593 0.00041593 0.00041593 0.40944000 -0.00539920 0.02286500 0.01359300 0.01698500 -0.41245000 -0.41245000 0.01474900 -0.02000100 -0.40827000 -0.00802440 -0.01711600 -0.41058000 0.02132300 -0.38179000 -0.38739000 -0.40838000 -0.38291000 -0.39837000 -0.39837000 -0.30991000 0.00485790 -0.34996000 -0.02041200 -0.39830000 -0.40429000 0.76619000 -0.36283000 -0.01505400 -0.39645000 0.00694350 -0.40141000 0.02328600 -0.40063000 0.02398700 -0.00678130 -0.00678130 0.02286500 0.01359300 0.00597000 -0.40074000 -0.41245000 -0.41245000 0.01419000 -0.41399000 -0.00802440 -0.01037000 0.01084200 0.38584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 9.345002 14.808103 4.753728 9.930664 4.444395 12.447946 3.621278 3.444402 8.893815 10.734616 7.196960 7.557460 5.932064 10.955978 9.644496 3.965230 7.994977 9.517957 7.886620 10.256226 8.542393 6.295875 11.556553 2.920827 8.267349 11.585505 5.330225 NA 9.935553 1.728182 13.886484 12.403391 7.553830 10.269563 10.954602 10.389459 2.242755 2.920827 NA 6.178223 9.088253 10.916249 8.008298 8.037179 10.209407 8.631642 10.018209 6.550191 10.872120 4.206237 11.689226 2.242755 4.090760 9.762077 6.566710 8.024123 10.331287 8.734616 10.518422 8.665669 14.404399 NA 10.908099 -1.079173 9.199285 3.564695 8.154455 8.660616 12.697879 6.772584 7.624739 11.871938 10.243890 10.772975 4.593258 10.823587 8.865474 10.675305 13.133256 10.975440 8.465800 7.824717 1.242755 8.187622 9.518888 10.231448 4.728193 8.767892 8.755306 5.898114 8.646065 7.494483 5.675723 10.382826 6.635081 NA 9.200446 7.674286 11.771022 9.931363 7.827726 9.936947 6.313153 8.095761 8.853050 10.705879 10.620841 10.535085 9.791200 7.424661 NA 9.383961 8.155222 9.105711 10.559271 6.708738 10.363779 9.531860 6.875032 14.929308 10.465800 10.324380 11.881561 10.693562 8.175864 2.920827 TCGA-E9-A1ND 75 0 NA 383 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.803895e-06 3.469029e-07 11.4963749628 NA 6.1077966531 11.3851340224 -0.0007215279 9.4401407860 NA 9.1220996058 11.3620373924 7.9388509250 9.7339813157 7.5804718934 8.8337427239 9.5452013861 5.7541579552 9.3030523686 9.7441054121 10.2495700166 8.9106637150 6.9992717061 10.5884545523 11.3410683763 12.6555847449 10.0953279195 9.5529009474 10.1439298293 8.0299387086 10.4851009361 -1.0008658768 1.8066127738 9.4411782241 11.9552846837 12.0842460456 6.5691264835 11.3666863941 10.0680498958 11.6311307541 7.5306529106 4.1691954545 7.0760876539 8.8696364064 4.8819141820 5.0867328226 3.3915890214 NA 11.8301828973 10.9084146889 8.1259759731 9.6439301260 10.3980153211 8.6610497983 8.8114488736 1.5842409728 15.6679695285 11.4328570771 3.8572544899 8.8541399968 NA 5.4911251532 9.7049039449 10.4038810016 9.7109386460 10.0827510147 9.2812016587 9.8688654492 2.4586969687 11.2310928087 10.3335449372 4.5842349586 8.9344365921 1.9992784721 6.7407387135 14.0494178713 7.3764388619 10.5996491916 10.5203812891 10.2648867177 2.6997070870 NA 7.8353221944 8.5070663710 13.8907705567 -1.0008658768 4.2846769899 7.4790518627 10.1117110682 9.4709467743 6.4830869919 8.1259759731 4.9061642563 10.7242117252 11.6754490902 1.5842409728 13.6285713148 4.3568269562 6.3121550727 10.9292696542 12.7173763301 12.7670422701 7.5538604138 10.5973240811 10.6449300568 10.0771488478 10.5306531056 4.1285573650 8.2823601061 12.8291925265 6.5070667676 NA 11.0313173748 9.3223263590 2.5842409728 3.9100034562 9.1401014668 11.6458303388 10.3245770645 10.0146866909 15.1852117079 10.3623113072 9.4881158877 7.5030974503 0.9992784721 12.4371537031 7.9992717061 13.4611347197 13.0332107631 10.6226959452 9.2683983669 8.5110244031 10.4110950675 0.1914100 0.1914100 0.0476940 0.0175440 0.0193330 -0.2854900 -0.3006300 0.3427500 0.0349590 -0.2869100 -0.2869100 -0.2778600 -0.2711700 -0.2711700 -0.2742800 0.0251220 0.0251220 0.0063871 -0.2794100 0.1188800 0.0260920 -0.5859800 -0.2660000 -0.2660000 0.0379240 0.0345360 0.0345360 0.0269350 0.0245480 -0.2613100 0.1914100 -0.6723300 0.0175440 -0.2854900 0.0332670 -0.2801300 -0.5865700 -0.2863200 -0.2852500 0.0465590 0.3133800 0.1121300 -0.2869100 0.0109820 0.0420240 0.0420240 0.1677500 -0.2711700 -0.2648000 -0.2742800 0.1106700 0.0204830 -0.2788200 0.0311550 0.1188800 0.0260920 -0.2704500 0.3556100 -0.2660000 -0.2660000 -0.5874500 -0.5658500 0.0269350 0.0297470 0.0125160 -0.2587800 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 8.7985531 12.7977434 0.9992785 9.1038703 2.9061594 11.4755115 0.9992785 6.3480004 9.6796312 9.7806313 4.0867328 7.0980405 8.9836899 10.9911477 9.1195095 1.8066128 4.6997126 9.4463549 9.2892904 10.2105515 9.2503515 7.5189080 11.7744704 4.3568270 6.9001386 9.8688654 5.6139824 NA 11.2640074 0.9992785 12.7506065 12.3011965 9.0299387 9.7499787 11.9923869 9.9643344 6.1388227 1.9992785 -1.0008659 0.5841929 8.7969332 9.1477483 6.8819142 0.9992785 10.0231784 7.8226390 9.8933314 4.5538581 9.4961254 5.9534678 10.2292921 5.0867328 4.2471984 10.3195589 6.3843572 6.8940890 10.2672286 9.4750050 8.8849681 11.3296284 13.1911020 0.9992785 10.6614950 0.5841929 10.1553547 3.4586970 8.4086626 9.1259760 12.0085404 8.6699278 8.0299387 11.3666864 10.4535709 10.7109386 3.3915890 7.3166843 9.1641786 10.6765508 13.4683410 10.2933179 8.5070664 7.3346621 0.5841929 7.6286285 10.4318135 11.489872 4.086733 9.023026 8.963613 8.507066 10.058467 8.275396 5.208724 10.095328 9.259015 -1.000866 7.059967 9.927294 12.417388 10.677432 8.382976 8.980839 9.054554 7.787175 9.710939 10.893710 10.769936 10.781041 10.769936 8.950556 NA 10.556084 6.391589 8.046396 9.470947 6.408663 10.750816 10.724212 7.237677 13.848286 10.269567 10.589391 12.736625 9.916644 9.623153 5.339123 TCGA-E9-A1NE 28 0 NA 1088 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 124.53.0 NA NA 2 5 NA NA 3 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.509076e-07 5.562279e-08 11.52385605 8.67510033 6.87291862 10.77761689 1.41678571 11.04557983 2.09484410 10.08884149 12.11530081 7.89897256 9.76328359 7.83799305 9.28713449 9.05266912 6.43469160 9.74454695 10.04466842 10.83462226 8.46225645 6.00773148 10.26945528 9.44853986 14.42216625 11.34957505 9.51638062 11.11008248 8.50952682 10.62597946 NA 1.09484410 10.03698953 13.13838168 12.93660846 9.72465368 12.11147589 12.39954951 8.97519051 7.38255400 4.78134397 6.66469758 8.96751650 8.79441424 7.24965961 11.88580103 2.67980660 10.07926010 13.34269504 4.64943152 9.02631788 10.74791066 6.50846985 8.22283595 0.09477656 14.09857391 12.19927662 3.73870300 8.15823653 -0.32012585 5.23439402 10.36309122 10.12343846 9.74454695 10.86488612 9.87743047 9.63835681 3.38024459 11.56499213 10.26976733 5.79528122 7.90219661 1.09484410 11.10990821 14.32979005 7.99018964 11.54218326 11.65768033 9.58969721 1.26477661 3.87620259 8.91022508 9.97824869 12.46225643 NA 4.92773056 6.99268687 10.53467260 11.00398473 6.33324661 8.79528155 5.37096633 10.31703278 11.87291881 5.67226975 13.02252706 4.97748601 7.75839979 11.95039153 11.02391511 12.90992471 7.64366358 9.72510888 11.13940656 10.68368040 11.81743579 5.49572074 8.37677180 11.74903017 10.16361999 -0.90508835 10.16395579 9.79528139 1.09484410 3.38135260 9.79744721 9.96597687 10.54682541 9.79874525 14.99583817 10.55862151 10.51453861 8.98510589 4.24459027 15.52350445 8.39633805 13.04844704 12.88274424 9.91262487 9.20336611 8.34513997 10.09580999 0.1210800 0.1210800 0.1210800 -0.0661180 0.0000000 -0.0100940 0.3904800 0.2319400 -0.1708200 0.2105400 0.2105400 0.2105400 0.1700100 -0.0922830 -0.0769450 -0.0769450 -0.0769450 0.0533790 0.0533790 -0.0069195 -0.0895300 0.0052749 0.0153080 0.0153080 0.0153080 -0.0051227 -0.0051227 -0.0051227 0.1265300 0.1210800 0.1210800 0.0074014 -0.0661180 -0.0100940 -0.0381460 -0.0544200 -0.0544200 0.2319400 -0.1708200 -0.1708200 0.0907200 -0.2050500 0.2105400 -0.0370820 -0.0370820 -0.0370820 -0.0370820 -0.0922830 -0.0922830 0.0649400 -0.0769450 0.0533790 0.0533790 0.0533790 -0.1179000 -0.0895300 0.0052749 -0.0444150 0.0153080 0.0153080 -0.0247960 -0.0051227 -0.0051227 0.1265300 0.0223040 -0.1118200 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 10.70263434 12.27046920 5.88925693 10.25943445 6.21212183 10.13957732 5.35222886 1.09484410 8.25218855 7.55632135 -1.90508835 8.48277287 4.00173020 10.71116078 9.40659003 0.67978409 10.99966444 9.59717619 8.80994558 10.72442594 9.78770556 8.09343235 9.78527623 3.22411747 7.20858359 9.63835681 6.36630473 0.09477656 10.91860694 3.30429199 12.68992428 12.31423711 7.81764948 10.02594846 10.50926265 9.06494750 4.63400074 2.34278228 0.67978409 4.87620259 7.87783994 9.38197678 8.89816572 5.34276806 7.92711482 6.62231836 9.76017753 6.40772493 10.08671783 -1.90508835 10.95398818 4.11721296 4.02557812 9.71143640 6.10265393 7.20075053 9.83166637 9.66137141 8.11720932 -0.90508835 13.33417915 2.00173020 10.97977536 NA 7.88763188 4.53778682 7.58869740 8.21637532 13.3982300 6.7241987 8.7196373 12.1114759 10.4857952 10.6959160 11.8858010 11.9189054 9.3146152 11.4670266 13.4661759 11.4215521 9.9782487 8.3486892 0.9021894 8.1875990 11.9154196 11.25313577 5.97748372 9.03808906 9.06206800 8.42799705 10.38479141 8.85722369 8.50741172 11.34957505 5.84972910 0.09477656 6.18759951 7.27016635 11.24204659 11.26711293 9.45184370 9.51585455 12.56021677 8.38946227 9.74454695 10.56015301 11.03625612 10.08600920 10.73282501 9.27350657 -0.90508835 9.06340776 8.61383881 8.46334821 11.00398473 6.05484414 10.81833835 10.31703278 8.03000660 13.47952426 10.29082893 10.21313388 12.59050937 10.39605200 9.72009391 3.76726282 TCGA-E9-A1NF 60 1 1072 610 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) yes 0 white not hispanic or latino 120.48.0 NA NA 1 3 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.343418e-07 1.668684e-07 11.5766171 4.4376539 6.3527621 10.6426408 1.6303123 10.3404133 0.3083609 9.9674715 11.0901371 7.6257804 9.8377981 7.6526636 8.2567347 10.5413880 6.2391059 10.0096740 9.2435327 10.3355825 8.4273087 2.3083609 11.1261507 11.0586559 12.5663446 10.0523605 9.5809973 10.6087202 5.8319304 10.1108839 NA 0.8933622 9.3554914 11.2416894 13.0236861 9.5006605 12.0991233 11.7825805 9.6963849 6.0897269 4.1663459 7.7677991 8.5937698 9.0208947 9.2391049 11.8744216 1.3083609 11.3774816 11.5952141 5.6659186 9.5031122 10.3230855 7.8082132 6.4782923 -0.6915226 14.1189206 8.8377982 3.1157158 7.7800430 NA 5.7346310 9.6029883 10.1157226 9.4427938 10.2956315 9.9468035 10.1577727 -0.6915226 10.6314224 9.4011246 7.1787326 7.9340765 0.3083609 10.4857872 15.8284184 8.3965461 10.3818397 10.8513994 8.7325338 2.6302890 5.7678004 8.3851834 9.2420582 11.3383449 NA 7.8933301 7.0699191 9.5914560 11.4431148 7.4782923 6.2625647 6.0632548 10.5704625 11.6615144 0.3083609 13.5276874 6.0226142 7.4882764 12.3314288 14.1691636 13.0877792 8.6482177 10.0174514 10.9549263 10.2108784 10.9737035 4.1663459 9.1396749 12.8585131 9.2552739 -0.6915226 10.6620658 9.1349160 -0.6915226 3.4025994 8.9486125 10.7507928 10.4951009 9.0864446 15.3274587 9.9816766 9.6582017 8.7595786 2.6302890 14.4030639 8.9359014 13.0001111 11.8309491 9.4593841 10.0371384 8.1756464 9.5858294 -0.0219210 0.0893730 -0.2209600 -0.4178400 0.4691300 0.0901410 -0.4138800 -0.4655900 -0.1166500 -0.4429700 -0.4429700 0.4602400 -0.2239200 -0.1139100 -0.4186000 0.0065262 0.0065262 0.1517300 0.1517300 0.1380600 0.4640000 3.6569000 -0.2662500 -0.2662500 0.3016900 0.2507400 -0.7318700 -0.4400500 0.1291800 -0.1262000 -0.0219210 -0.7901700 -0.4178400 -0.0713380 0.1100800 0.0000000 0.0000000 -0.4655900 -0.1166500 0.1822300 -0.8007800 0.0065262 -0.4390800 -0.4202500 -0.4202500 -0.7480300 -0.0125760 -0.1139100 -0.1139100 -0.4186000 -0.3147100 0.1517300 0.1517300 0.1535200 0.1380600 0.5394200 0.2686000 -0.2465500 -0.4248400 -0.2662500 -0.4104700 -0.1345800 -0.4404800 0.3181900 -0.4309400 -0.7464700 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 0.251 -0.150 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 -0.262 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 0.251 -0.150 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 -0.262 9.3097758 15.0510717 4.9522217 10.3541273 1.2902474 10.2748730 0.8933622 NA 8.0599117 9.6347971 NA 9.0286973 3.3083609 11.5923241 9.4427938 2.1157324 8.3307354 9.1475713 9.5383880 10.8240674 9.4239575 7.3527621 12.6274752 3.3958306 8.0962703 10.1577727 3.2152592 NA 10.6554352 2.4782988 13.1516998 12.9728149 8.8181424 9.8552620 9.8161622 8.9983656 5.1157241 1.3083609 NA 1.8933234 8.6593067 10.7135090 9.1507178 3.7678031 8.6129013 6.3744570 9.8191317 6.9665793 9.6132893 NA 11.0075062 4.8933282 3.8933331 9.8077650 5.9271925 2.3083609 10.1019709 9.1076492 6.4376505 3.7006838 14.4178310 1.3083609 10.7769916 NA 7.4782923 5.2152592 8.0157267 9.1879508 12.052810 5.115724 9.044769 12.099123 10.712445 10.177961 11.874422 16.091788 9.141258 10.269817 12.851037 9.675782 9.242058 8.203185 NA 7.742996 10.194064 10.983884 5.166350 9.029450 9.096270 7.503124 10.069819 6.816162 7.256735 10.052360 7.347287 1.630312 5.593769 6.578522 12.068672 10.819132 8.341791 9.410343 10.151503 4.593772 9.442794 10.796710 10.767799 10.008807 10.750793 8.786126 2.115732 9.320699 7.807217 3.831928 11.443115 10.421459 10.763104 10.570462 7.001854 14.410302 10.583910 10.509879 11.945898 10.209989 9.543185 2.767803 TCGA-E9-A1NG 62 1 786 656 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 2 5 NA NA 1 1 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 8.343418e-08 11.2128792 0.2845141 7.0724489 11.0177731 0.2845141 10.1170403 -0.7154859 10.0708156 11.5752847 7.4694212 9.7347260 7.2901700 8.4952171 9.9400766 6.1914363 8.2343725 9.5425229 10.2767761 8.6530525 8.7097617 9.9024725 10.4183303 12.6646010 10.8122673 9.2056430 10.5386887 4.3506316 10.4939992 0.2845141 NA 9.7858855 12.3909452 12.7433370 9.7813997 12.2438234 12.1839972 10.4597835 5.6595850 1.2845734 7.5419337 8.5814620 7.7295609 9.2824310 12.2800481 1.9849903 10.9154955 12.8020307 5.0919029 9.7478813 9.6552332 7.5536723 5.3398286 -0.7154859 13.6898988 12.9232516 1.9849903 8.0377627 0.6064422 5.3179697 9.7972864 10.6154627 10.3330328 10.9765074 9.8793370 9.7908535 0.2845141 11.0084201 9.6671699 5.5133644 8.3720088 -1.7154859 8.0999290 15.7810564 7.4032012 11.4726710 11.2372871 9.3586872 2.5324666 2.8695161 8.3891447 9.4619654 11.9893141 3.3289370 8.6243959 7.2416476 10.1656599 11.9566397 7.1823914 7.2873605 5.0260121 10.8448787 11.6217496 0.6064422 14.0314275 4.9987912 7.1944387 12.4880468 14.3022242 12.5723304 8.5536727 10.4958259 11.3538278 10.7529637 11.0114026 4.9139043 8.4988652 11.7686135 7.8863166 -0.1305234 10.6028062 9.1401930 -1.7154859 2.0919029 8.9534308 10.8244317 10.4888113 8.9569711 15.0896599 9.6288417 9.4817625 7.4060791 6.2387429 14.2017548 10.0963220 13.7541241 12.4540012 9.6431971 9.8100666 8.4507090 9.5290524 0.01195800 0.01195800 0.01195800 0.00000000 0.00000000 -0.00152430 -0.00013862 0.00000000 -0.00353620 0.01502800 0.01502800 0.01502800 0.00027728 0.00027728 -0.00387790 0.00485790 0.00485790 0.00527490 -0.00277070 -0.00871460 0.00124810 0.00263570 0.00458000 0.00458000 0.00458000 -0.28477000 0.00471900 0.30425000 0.01936300 0.01195800 0.01195800 -0.00373950 0.00000000 -0.00152430 -0.00413960 -0.00013862 -0.00013862 0.00000000 0.00000000 -0.00353620 -0.00761010 0.00212830 0.01502800 -0.00277070 -0.00277070 -0.00250770 -0.00110870 0.00027728 0.00027728 0.00173190 -0.31563000 0.00527490 -0.00277070 -0.00277070 -0.00871460 0.00124810 0.00263570 -0.30663000 0.00458000 0.00458000 0.04670000 -0.31120000 0.30425000 0.01936300 0.00055459 -0.30733000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1249305 15.0280523 5.8992554 10.1637461 NA 10.3606934 0.2845141 NA 8.3289401 9.6221677 NA 8.9420608 3.9849812 10.3299643 8.8448787 -0.1305234 6.2788992 9.6002616 10.5172665 9.8149522 9.1778550 7.6177011 12.3540796 3.2387410 8.2929745 9.7908535 1.0918691 NA 10.8645688 1.9849903 12.4579888 12.2146364 8.1440805 10.4949128 9.2299897 9.5974287 6.1854127 3.1425278 -0.7154859 3.0394367 8.0141667 9.4437865 9.4380980 0.2845141 7.7258713 6.1914363 10.3292815 6.6019579 9.5928849 NA 10.4691113 5.8544022 4.3289370 9.8159225 5.9146315 1.7439888 9.6987026 9.6260647 6.4393638 8.9631461 13.6646687 1.7439888 10.3275732 -1.7154859 8.5525031 5.2034087 8.0293794 8.8638617 13.3756506 5.6420979 8.7582515 12.2438234 10.5401647 10.2056430 12.2800481 11.4202552 9.3878336 10.8501240 13.3154716 9.5300986 9.4619654 8.8246740 -0.1305234 7.4842179 10.9385105 11.0702027 5.6939357 9.3546668 8.6332739 8.4073740 10.0486503 7.8918760 6.5419329 10.8122673 7.7398731 1.0918691 7.2445475 6.6318566 12.8465497 10.5664759 7.8874119 8.6939368 11.0394334 5.2845474 10.3330328 10.5238461 11.0781492 10.2586020 10.4927802 9.3124519 -1.7154859 9.1488403 8.0673806 3.8695062 11.9566397 10.3435523 10.3131427 10.8448787 6.8959763 13.7043415 10.1618300 10.2514118 12.9674308 10.0239046 8.9823822 0.6064422 TCGA-E9-A1NH 71 0 NA 0 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 120.48.0 NA NA 3 2 NA NA 1 1 3 4 1 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.946798e-07 10.6175677 6.1058666 8.6592588 11.0186779 -0.1608466 9.9894618 NA 9.9837381 11.4494126 8.2737080 9.7024918 7.5533252 8.4666137 9.1811545 7.2902908 9.5053038 9.3438988 10.2367545 7.7727705 -0.1608466 10.4017993 10.4981837 12.6555635 11.0319890 9.2032144 9.8149278 5.3936702 11.1002874 0.4240621 1.6464392 8.8390797 12.1786515 12.6069539 8.2313974 12.9890650 12.4385278 9.5678506 6.6138675 2.8390727 6.7217226 8.1564922 10.1319765 8.6544631 13.2393589 -1.1610079 11.0798711 13.8057655 6.1610089 9.6896182 10.1468498 8.3349347 8.8048641 NA 13.6576590 9.1887701 3.4829386 6.7874468 -1.1610079 4.8834742 9.3975005 10.0654921 9.6302427 11.6049875 10.3269199 9.9888270 2.6464392 10.5066350 9.9436786 5.9265427 8.7830598 7.1699971 11.4618180 15.3090713 7.9649582 11.0958782 11.0813607 8.3743553 3.5395187 3.4829386 8.8048641 9.1233255 11.9810273 -0.1608466 7.4611315 6.9051692 9.3946275 10.9961109 5.0090067 6.1244812 4.5115060 10.3198700 12.0214742 2.4240352 13.6058675 7.1382882 7.5185595 12.3497204 13.5659898 13.1904332 8.3389258 10.1122926 11.0756920 10.2157479 10.8034207 4.5669978 8.6286136 13.0127569 9.7668578 3.2314017 10.3026042 8.6432108 0.4240621 3.2362018 9.8991002 11.1038156 10.2990237 9.1186904 14.7630108 9.4972912 9.4501046 9.5247047 3.4829386 15.9495733 10.1342747 13.6114975 11.4845131 10.0893782 9.9554238 8.4334043 10.7353441 -0.29863000 0.82333000 0.85245000 0.00847430 0.60575000 -0.29426000 0.02504800 0.00124810 -0.00067532 -0.30616000 -0.30616000 -0.61997000 0.01838300 0.01838300 -0.28857000 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.00833510 -0.29945000 -0.29945000 -0.29945000 -0.00637040 -0.00637040 0.00097064 0.02020300 -0.29863000 -0.29863000 0.00000000 0.01077300 -0.29426000 -0.30063000 0.02504800 0.02504800 0.00124810 -0.00067532 -0.00067532 0.01936300 -0.63093000 -0.30616000 0.00360760 0.00360760 0.00360760 0.00360760 0.00912640 0.04216600 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.01886800 -0.59828000 -0.29945000 -0.29945000 -0.28513000 -0.00637040 0.00097064 0.02020300 -0.30768000 -0.26631000 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.011 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 -0.299 0.852 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.011 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 -0.299 0.852 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 9.3646007 14.4018290 6.6204398 10.2249423 2.1610170 11.4925967 -0.1608466 NA 8.1811542 9.0412035 NA 8.6213083 3.1610008 10.3596985 9.6600565 1.1609847 7.7032662 9.3965436 11.4017992 9.5369162 9.5328369 8.0064978 11.9967425 4.0485326 7.4202803 9.9888270 4.1610089 NA 10.5364818 2.5395311 12.7108888 12.1692964 8.8517044 10.4245119 8.0774844 9.3811443 5.7579433 0.8390727 NA 5.9888278 8.4811314 9.5788604 9.5914604 3.1610008 9.1485106 5.6719698 9.8773130 7.3665565 9.2206228 NA 10.8266991 3.2314017 5.3148125 9.9393873 7.4671246 4.4240420 9.3616613 7.5498863 6.4901321 -0.1608466 13.7046681 1.1609847 10.1186904 NA 8.2119447 5.7579433 8.1587521 8.9038225 12.912492 4.745969 8.695505 12.989065 10.280986 10.751595 13.239359 12.118835 8.917231 10.435735 13.416686 8.582231 9.123326 9.506191 NA 7.239959 10.972222 11.4186314 6.3936685 8.6480440 8.6496514 6.9983456 10.6380416 7.0726997 8.1811542 11.0319890 7.0289039 2.0089888 7.5670000 6.0625017 11.6650323 10.2918358 7.5737896 8.4427063 11.5595378 4.7932769 9.6302427 10.3314337 10.9081938 9.9004510 10.4183957 8.9384275 -0.1608466 9.2170387 7.2726652 5.3468754 10.9961109 10.8714700 10.7907288 10.3198700 6.9838908 13.8492145 9.6978379 10.3636215 12.6876050 10.8534491 9.5132720 2.0089888 TCGA-E9-A1NI 51 0 NA 300 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) yes 0 white not hispanic or latino 120.48.0 NA NA 1 2 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.615481e-07 1.112456e-07 11.3724294 2.5198186 8.3059500 11.0962273 NA 10.1524938 -0.9395375 9.6425393 11.3056529 11.6498144 9.7398775 6.7677567 8.1505099 8.8564367 7.1741397 9.0073034 9.4332624 9.8491156 7.2353231 2.0603933 10.3312766 9.9732867 13.2106206 10.7110003 9.3457995 10.4494908 4.0145963 10.3400078 -0.9395375 7.0993162 7.5562524 10.2215291 12.2199533 7.4697883 12.7076308 13.3711521 9.2465114 5.8548135 1.3823352 7.1531548 8.2526900 9.6668026 7.9732864 12.8480958 3.9183767 10.2284426 13.9762300 2.9672793 10.2553757 10.7033515 8.4719085 6.2303222 2.0603933 13.2869600 11.5400386 2.6453558 6.0938200 NA 3.4527140 9.4234370 10.1871017 9.4069110 10.8081707 10.0813772 9.2625210 2.2303260 10.6723442 9.5552529 6.0716254 8.6842787 7.3732802 11.8167451 14.5703578 8.2629377 11.2328248 11.0297838 9.7319384 1.8677384 4.0603933 8.6321500 8.7486477 10.7306109 3.5198312 7.2551542 7.6933922 9.7686191 10.8298219 5.9307610 5.2698523 5.2698523 10.1458698 11.8254762 3.3083317 13.5846329 8.5859180 7.6302526 11.1832253 13.1012007 12.3724293 9.4256261 10.5942136 11.0691760 10.2271880 10.5542527 4.2698485 9.4321740 11.6285909 10.3101033 -0.9395375 10.7912919 9.2612960 NA 4.1082819 8.9762766 11.1041081 10.5038589 9.0674247 15.2936612 10.3749805 9.6906643 8.6787829 1.8677384 15.4009776 9.0632122 12.9164337 11.5632291 9.9027476 9.3755469 8.4069112 10.0464242 -0.267330 0.468950 1.564000 0.047892 0.037396 -0.142320 0.229310 0.048087 0.048087 -0.635340 -0.635340 0.767920 -0.127460 -0.127460 -0.046718 -0.046718 -0.046718 0.388930 0.388930 0.125050 0.339660 0.160550 0.037641 0.037641 0.896080 -0.315840 -0.315520 -0.343890 0.753050 -0.281190 -0.667720 -0.481870 0.048699 -0.142320 -0.095120 0.229310 0.229310 0.048087 0.048087 0.319960 -0.050911 -0.055792 -0.635340 -0.586880 -0.586880 -0.570640 -0.561370 -0.127460 -0.127460 -0.046718 -0.649490 0.388930 0.388930 0.388930 -0.168830 0.351370 -0.191370 -0.583330 0.037641 0.055515 0.129180 -0.298510 -0.343890 0.753050 -0.038170 -0.535510 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 8.16368489 14.08791457 7.03767763 10.00803428 NA 10.82982190 NA NA 8.35501803 9.61402661 0.64533275 7.31665353 3.58396429 10.28439892 8.88694576 3.81528850 6.90588757 9.34232740 5.61498658 11.55700143 9.63304062 6.76083702 11.05863511 1.64537887 9.61498621 9.26252101 4.76083835 NA 10.91798953 1.06039331 12.74646003 12.33375582 8.67326561 10.25638456 10.72484456 9.79510683 4.64536158 0.64533275 -0.93953751 11.59104748 9.00584122 10.50334078 9.50022823 1.86773835 8.70060617 7.91837848 10.96465558 6.29880126 10.12850375 0.06046249 10.14054862 1.38233524 3.64535581 9.64606399 6.73331773 0.06046249 9.13854802 8.02906411 6.51160877 1.64537887 14.07066312 -0.93953751 10.25822823 NA 7.00876474 4.14786022 8.04623948 9.32952392 13.523635 6.503341 9.066022 12.707631 10.458072 11.983539 12.848096 11.989656 9.001445 10.736795 12.876381 9.930762 8.748648 9.804390 1.382335 7.841757 12.157606 10.4777224 7.0883028 8.7849113 9.3811979 8.8942836 9.6702317 5.7883177 7.7042537 10.7110003 5.7328227 2.5198186 6.6072918 7.9591198 10.7195013 9.7159280 9.2755663 9.5208532 10.6500485 2.8677581 9.4069110 10.8442140 11.6575187 9.7319384 9.9881753 8.1999486 -0.9395375 8.5947195 7.0758685 2.8677581 10.8298219 8.6714222 10.0014449 10.1458698 6.7042537 13.0529816 10.4660706 9.9970352 12.4261729 10.6430097 8.9612642 NA TCGA-E9-A1QZ 61 0 NA 362 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 1 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 2.781139e-08 11.3692236 9.4593060 6.9642577 11.0038576 2.2812531 10.2671055 2.0886165 9.6975334 11.4764819 8.9738790 9.7017502 7.6800071 8.9178882 8.7610439 8.6552162 9.5130847 8.6211134 9.8324912 8.0527528 5.3687265 10.2991158 9.4405042 13.3487400 11.6703571 9.3580791 10.7547157 7.3950054 10.2234114 -0.1338437 1.7407117 9.9955091 12.9391960 12.6675302 8.3297506 12.8230257 12.4570470 8.9528047 6.1267540 2.8662354 8.3976075 8.9465996 9.7519224 7.8048254 11.9667789 0.8662354 10.9725709 13.3964292 4.8048280 9.4284684 10.4057080 11.0098219 6.7569966 NA 14.1322732 10.1274748 3.3256598 7.0260973 0.6032168 3.0886165 10.0163964 11.6638876 9.9439319 10.5544764 9.4227321 9.8218760 6.9677646 11.3834033 9.2456045 4.3687265 8.4423953 4.8358534 10.4166522 14.2717443 8.1305906 11.1450627 11.3458379 10.4214542 0.8662354 1.2812531 8.3008545 9.3799536 12.0052444 NA 4.7890563 6.7033278 10.6000888 11.0500682 5.5291900 7.2090419 6.7930167 10.4015014 11.7081835 3.1392403 13.8751798 6.7117165 7.7791152 11.2865372 11.0683499 12.7689780 8.7458094 10.1949010 10.9679829 10.6976125 10.8339327 4.4710899 8.4499356 11.8720845 9.7791154 0.2813125 10.8274346 9.4278322 0.6032168 2.8692200 9.6853407 10.4063542 9.8936713 9.6762621 15.5363844 10.5076757 9.8601080 8.4156898 3.5666691 14.9300003 7.2924910 12.3334920 12.3359527 9.7691036 9.0419835 7.7012240 10.1616507 -0.078677 0.495800 0.495800 0.000000 0.000000 0.075847 0.070960 -0.116260 -0.116260 0.064511 0.064511 0.064511 -0.090626 -0.090626 0.051956 2.439500 3.090800 0.067375 0.067375 -0.092610 -0.169930 -0.089699 -0.266250 0.333990 0.333990 -0.118870 -0.118870 -0.125990 0.367230 -0.109640 -0.078677 -0.087712 0.000000 0.075847 0.075847 0.070960 0.070960 -0.116260 -0.116260 -0.251520 0.225610 0.223790 0.064511 -0.201620 -0.201620 -0.201620 -0.201620 -0.090626 -0.090626 0.051956 -0.249020 0.067375 0.067375 0.067375 -0.092610 -0.169930 -0.089699 -0.254910 -0.266250 0.333990 -0.073877 -0.118870 -0.118870 0.367230 0.083557 0.054376 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 10.2336408 11.3627470 5.0494478 9.5844734 5.8462526 9.8477934 4.8048280 2.6735790 8.6917149 9.1078121 0.2813125 8.2423224 6.0691651 10.6919799 9.0797354 2.8048177 9.8681033 9.2398162 7.3473530 10.9361233 9.9489960 6.8511194 11.8762879 3.0361516 9.0576967 9.8218760 4.4907177 -0.1338437 10.7151098 4.0886165 12.9665599 11.9720255 8.3036314 10.1787309 10.3554051 9.0344804 2.9817066 1.8662354 2.0886165 4.4105446 8.9817034 8.6054440 9.6216700 7.4561893 6.7131789 4.8811752 10.2303607 4.3473538 10.3746811 1.4511715 10.7638194 2.1881477 4.6031931 10.2369388 6.9537599 6.6475865 10.1376891 8.6789381 6.8511194 NA 13.7636934 2.2812531 10.5178757 NA 7.4858349 5.7075276 7.9269222 9.0926382 15.016600 6.703328 9.298768 12.823026 10.449936 11.088417 11.966779 12.208486 11.287614 10.885817 13.612215 10.581330 9.379954 8.634410 2.088617 7.750905 11.317609 10.664698 7.932315 9.002363 7.667126 9.737618 9.255370 7.883034 7.194153 11.670357 5.988623 3.566669 7.088619 7.402460 10.627223 10.675190 9.552727 8.340608 11.778117 7.645398 9.943932 10.600653 10.989701 9.297375 10.376990 8.574735 -1.718806 8.739444 7.664968 8.805805 11.050068 5.974750 10.490717 10.401501 6.992070 13.981541 10.384551 10.362747 12.724984 9.357411 9.360082 2.529196 TCGA-E9-A1R0 58 0 NA 435 breast stage iia t1c n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 147.48.0 NA NA 2 2 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.39057e-07 10.9809142 9.4872150 6.7142318 11.9861387 3.0377688 9.9752504 -0.1845885 9.4694184 11.8083174 7.9169173 9.2924627 8.3763486 9.1267489 8.7811633 7.8993013 8.5747123 10.4444321 9.2971786 7.3415526 3.6227313 10.3145606 10.4827863 13.0111101 11.8013396 10.0973091 10.8803463 6.2472250 10.8167826 -0.7695510 2.3178829 9.2141226 11.7945660 12.6902964 8.1373073 13.0450491 13.0126469 9.3025491 6.9651263 4.6054588 7.2583229 8.2541707 10.4513994 6.9986006 13.3307504 1.0378039 10.9098966 14.2655163 4.0377688 9.1020678 11.1778708 10.5198591 7.5813558 0.2304490 13.1416803 9.4471624 2.4003467 7.4640360 -0.7695510 3.7222693 9.7117114 10.2416438 11.3482220 11.1905996 9.2219384 10.5056681 2.4003467 11.0521906 10.1259919 6.7500531 8.0553752 1.5523279 10.4616377 14.5326628 7.6931029 10.7384589 10.4257888 7.9802858 1.6898359 8.0377715 7.7773112 9.0751224 13.8310264 -0.7695510 5.5158197 7.3258136 9.4995432 11.4989585 4.8153807 5.1007801 4.4592349 10.4562265 11.7079219 1.8153705 13.6029756 7.5158189 7.4276330 12.0576600 11.7872818 12.5310551 7.8634120 10.3304218 11.0843109 10.8870648 11.1322262 5.1415104 8.8021693 12.2521773 12.3700478 -0.7695510 10.4664307 8.9230321 1.4003193 2.6234221 9.8377468 10.2565941 9.8674942 8.8930849 15.1018887 10.1795137 9.9861387 7.2856991 2.5523525 15.5991532 9.5830119 13.3004955 12.2059063 10.0759065 9.4165307 8.5364784 9.9978147 -0.0012473 -0.0012473 -0.0012473 0.0105640 0.0105640 0.0126550 0.0066653 0.0056945 -0.4715900 0.0037465 0.0037465 0.0037465 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0052749 0.0017129 0.5199600 -0.5066000 -0.0139530 -0.0078863 -0.0219210 -0.0219210 -0.0219210 -0.0131270 -0.0012473 -0.0012473 -0.0184900 0.0105640 0.0126550 0.0126550 0.0066653 0.0066653 0.0063871 -0.4715900 -0.4887400 0.0053980 0.0068588 0.0037465 -0.0029091 -0.0029091 -0.0029091 -0.0029091 0.0000000 0.0000000 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0037465 0.0052749 0.0017129 0.0512450 -0.5144500 -0.5066000 -0.0139530 0.0056919 -0.0219210 -0.0219210 -0.0131270 -0.4106900 -0.0172540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.295159 12.673101 9.266590 9.535338 4.184614 10.768120 3.317883 2.552352 8.628091 9.299866 NA 8.115762 5.998602 9.822406 9.102322 3.184614 9.252091 9.100781 10.604369 9.749070 10.046428 7.338941 11.895752 3.088396 9.888182 10.505668 8.986973 NA 10.304223 3.230418 13.368848 12.009007 7.909897 9.669208 7.430089 9.258322 1.400319 2.753968 -0.769551 6.592360 8.938638 9.395324 9.565249 7.439870 8.155615 7.008494 9.864320 4.902841 9.542732 1.815370 10.710702 2.230418 5.648270 9.673966 6.424139 6.125234 9.559652 7.815379 8.670247 NA 13.791734 2.985300 10.360343 NA 7.807846 6.050595 7.786922 8.312566 14.2622575 4.6898471 8.5978313 13.0450491 10.1335452 10.0105461 13.3307504 14.1485577 9.0003947 10.7220191 12.8014581 10.1878814 9.0751224 9.6493232 -0.1845885 7.7676349 10.8726939 11.1138235 6.6898485 9.2856991 9.1500247 8.6908724 10.4392849 6.8303289 8.2583225 11.8013396 6.3441592 1.2303875 7.3018793 6.6662112 10.1293957 10.2137665 7.4196484 8.2597037 11.4482228 7.2444371 11.3482220 10.6647841 9.5846659 9.7936127 10.5464152 9.3915484 -0.1845885 9.3973454 6.1191590 7.4925118 11.4989585 6.5613338 10.5772073 10.4562265 7.0601393 14.1355215 10.8305618 10.6587768 12.4043279 10.5284791 9.7821248 3.4783377 TCGA-E9-A1R2 51 0 NA 19 breast stage iiic t2 n3 mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 17 white not hispanic or latino 120.48.0 NA NA 1 4 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.455874e-07 2.503025e-07 11.4765366 6.7061962 5.8103865 10.6552583 -0.1202942 9.8683327 NA 9.8775332 12.0583129 9.4842014 10.1429173 7.2105652 10.3121899 9.7243539 7.1464343 9.5226023 10.4027199 10.4646106 7.1970604 3.1275838 12.1731197 9.7865387 14.3312778 11.7744658 8.9430431 10.7842827 6.1742686 10.5542729 -1.1202942 2.0495611 7.8740014 11.0392041 12.9801346 9.9027093 13.5855504 13.0683914 8.5870071 6.4342362 0.4645637 7.7714320 8.6659179 8.7061966 7.5556053 12.4464156 2.5800972 9.6982303 14.2041802 5.2194977 9.0204778 10.7820232 7.5053566 6.7061962 NA 15.1050875 10.1251948 2.5800972 8.7172761 -1.1202942 3.8338414 10.0300301 9.9724052 9.3421502 11.5742236 10.1913963 9.3983012 2.5800972 11.5062697 9.6691816 8.3390795 7.2105652 10.5030724 11.0679278 14.3052246 7.5537698 11.3313743 11.7778715 8.5538405 1.4646160 6.0191993 9.5670238 8.9644564 11.1210354 NA 5.6345352 6.7622917 9.6748760 10.5400897 4.0495698 5.9240429 5.1084659 9.8389256 12.1081662 4.0089350 12.7032143 5.8569284 7.2975005 11.4732726 12.8087215 12.7769263 8.7653445 10.9044414 11.6438977 11.3510997 11.2440564 5.3225916 8.8922726 11.5716096 11.6261624 -1.1202942 10.4753718 9.7141191 1.2015711 4.0984280 9.0470661 10.5035295 10.6206936 10.1481900 14.6050409 11.1936648 10.4617901 8.6143576 5.4188072 14.7332744 10.2459702 12.0548857 11.6179515 10.2144800 9.3943622 7.5904546 10.7218098 -5.8829e-01 5.3071e-01 5.3071e-01 5.4736e-03 -4.3718e-03 1.3077e-03 -2.8496e-03 -2.2959e-02 -6.0047e-01 3.6569e+00 2.8247e+00 1.1971e+00 -1.1965e-02 5.8871e-03 3.1118e-03 3.2507e-03 3.2507e-03 1.5088e-02 1.5088e-02 5.5096e-01 5.9565e-05 5.6126e-03 1.0302e-03 5.2791e-01 5.2791e-01 -2.6245e-02 -5.7709e-01 -2.5424e-02 5.4814e-01 -6.8601e-03 -5.8829e-01 -8.7933e-03 -5.9015e-01 1.3077e-03 1.6066e-02 -2.8496e-03 -2.8496e-03 -2.2959e-02 -5.9278e-01 1.7239e-03 0.0000e+00 -4.9489e-04 -6.1706e-01 -5.8751e-01 -5.8751e-01 2.1401e-03 2.1401e-03 -5.8623e-01 -5.8623e-01 -5.8946e-01 -5.8695e-01 1.5088e-02 1.5088e-02 -5.9347e-01 -5.8260e-01 -5.9122e-01 5.6126e-03 -5.9522e-01 -5.8584e-01 5.2791e-01 5.4990e-01 -5.9230e-01 4.4773e-01 6.0297e-03 -5.4767e-02 -5.8839e-01 0.000 0.000 0.000 -0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.059 1.197 -0.588 0.000 0.000 0.000 0.000 0.000 -0.583 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.059 1.197 -0.588 0.000 0.000 8.7744659 12.8678889 7.5017003 10.0921444 3.1092435 11.3794939 2.7865336 0.4645637 8.6328647 7.7500129 0.4645637 7.9170301 4.0089350 10.6651006 9.6328647 4.5520758 8.4188068 9.8425441 9.7576990 10.4846645 10.2085642 7.7438340 10.7496274 2.5800972 9.0140743 9.3983012 2.7865336 0.8796274 11.4051689 2.2015711 12.1402736 12.3594283 7.8511918 9.2932760 9.6253224 9.5981809 5.8103865 -0.1202942 NA 3.9240429 8.7188517 9.1879872 8.4090786 5.0495741 8.9309522 6.5449845 9.7857871 5.6345352 10.1936648 -1.1202942 10.6215363 2.3390804 5.2194977 9.9046700 6.7512454 4.2371966 9.4120041 7.8014891 7.1604191 0.4645637 13.5689363 0.8796274 11.0473798 NA 8.6805480 5.3390804 8.2826599 7.7895408 13.8335294 5.7865389 8.8192272 13.5855504 10.5257567 10.7854111 12.4464156 12.6449342 9.6227995 10.6519626 12.4687140 11.6534054 8.9644564 9.0939671 -0.1202942 7.8964565 12.3594283 11.4523483 5.9457364 8.0115051 8.2371999 9.1180529 10.3140313 6.4110296 8.2415919 11.7744658 5.0694745 0.4645637 7.7592311 7.7219673 10.4192915 9.8718783 9.2730386 8.9564636 11.1141661 6.1084659 9.3421502 9.8985436 11.8400121 11.1857097 10.7507833 8.4129779 -1.1202942 9.1017184 6.1370362 6.0495741 10.5400897 5.8569284 10.9233589 9.8389256 7.0395190 12.9105738 10.3684924 9.8126009 13.2727033 10.2584848 9.8859742 1.2015711 TCGA-E9-A1R3 70 0 NA 64 breast stage iiic t2 n3 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 10 white not hispanic or latino 124.53.0 NA NA 3 2 NA NA 1 1 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 10.9530796 1.7033222 8.1728135 10.2056243 -0.9971175 10.9508904 0.3248106 10.4543570 11.2567358 10.2725993 9.6717733 6.9007340 8.5981459 9.5887898 7.7460400 9.3521695 9.9751501 10.3276313 7.8961901 3.9801716 10.0972959 9.4877112 14.0202404 10.7828127 9.3488479 10.8682349 4.0028915 9.9693937 NA 1.0028825 8.8817056 12.2236445 12.5968629 7.6593131 12.1079783 12.3365328 10.0736801 5.2790143 1.8102374 6.5106835 8.6981167 9.4302012 8.1715606 12.8328092 5.1526337 11.1156536 13.2443501 5.0252548 9.9571900 10.4806465 8.4069656 8.9722748 NA 14.4122487 12.6978990 2.9097731 7.7015927 NA 4.5574775 10.6931045 11.3119383 10.5425318 12.0067575 10.2293005 9.5091958 1.1728075 10.6205853 9.4317719 5.8420913 9.4416802 7.0335552 10.1215050 14.6044560 8.2117691 11.4020327 11.2765382 9.6832478 1.5878450 3.1321655 8.7418249 9.1957974 11.0828730 NA 6.1424400 7.8561977 9.5930075 11.3993593 7.3157709 6.7809649 5.6893886 11.2127985 11.9284427 3.7308138 13.8919168 6.8794056 8.0703228 12.3437120 13.0297143 13.1376755 8.4354302 10.3838903 11.5956957 10.8305922 10.8194720 5.5027348 8.2424868 11.7535953 9.7911987 0.3248106 10.9297402 9.5995439 0.5878450 2.9580074 9.3343651 11.1539048 10.0414644 9.6023362 14.9626412 10.1985681 10.0155128 8.6404188 1.9097731 15.5305104 10.2567358 13.6296810 11.2402477 9.9354721 9.2293005 8.9621658 10.3820636 -0.32412000 0.91804000 0.91804000 0.01530800 0.00000000 -0.31761000 0.32334000 -0.00277070 -0.00277070 0.31370000 0.31370000 0.31370000 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00912860 -0.00041585 -0.00041585 0.67307000 0.00235810 0.30346000 0.02763800 0.02763800 0.02763800 -0.26287000 -0.26287000 -0.25213000 0.30250000 -0.30004000 -0.32412000 -0.00304750 0.01530800 -0.66217000 -0.31972000 0.32334000 0.32334000 -0.02096300 -0.00277070 -0.00277070 0.93345000 -0.64856000 0.31370000 0.00027728 0.00027728 0.00027728 0.00027728 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00041585 -0.00041585 -0.00041585 0.67307000 0.00235810 0.30346000 -0.32193000 0.02763800 0.02763800 0.30138000 -0.26287000 -0.25213000 0.30250000 -0.00705760 -0.48195000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.876 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.876 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 8.760278174 14.550701610 6.090351702 10.022131552 2.909773104 10.370303036 1.810237431 0.810237431 7.380099101 8.534269806 -0.997117491 8.871085887 2.462314127 10.750242117 9.292330837 1.462314127 8.172813509 9.454614534 12.556757522 10.220846009 9.006125195 7.780965542 10.587615989 3.557471360 8.068977609 9.509195831 1.324810603 NA 10.586206101 2.090345350 12.741350037 12.200258566 8.004296322 10.877677542 7.692886058 8.731659128 4.132173753 2.526444465 0.002882509 2.810237431 8.129592648 9.311227216 9.339952635 2.395199931 8.761328163 5.723987156 10.397886797 7.508699608 9.469984239 NA 11.460269173 2.957078819 4.587851008 9.133651883 6.310636410 4.587851008 10.262337311 8.398422202 4.797303563 1.324810603 13.747853472 0.002882509 10.308949998 0.587845009 8.644036876 4.526450725 8.794051247 9.725695833 12.863672 3.810248 8.416516 12.107978 11.237257 10.900356 12.832809 12.364969 9.290601 11.016734 13.384668 7.921752 9.195797 9.787114 -1.997117 8.026642 11.679507 10.991750420 6.466413408 9.208681610 8.962890223 7.610218729 10.243417269 6.549783128 8.348293510 10.782812743 6.568942625 1.909773104 6.900734001 6.087324930 11.953353062 10.210512699 8.176565628 8.685882697 12.000597031 4.909777904 10.542531819 10.577245269 11.545678361 10.429415111 10.478621703 9.614835154 -1.997117491 9.181403744 7.536217681 5.222054894 11.399359271 8.906016899 10.467178792 11.212798511 6.945402867 13.656629063 10.194872807 10.717563076 12.922356869 9.832214542 9.893912461 0.002882509 TCGA-E9-A1R4 66 0 NA 186 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 120.48.0 NA NA 2 5 NA NA 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.497701e-06 6.938058e-07 11.4836962 5.2686253 7.0262656 11.4884932 -1.3313362 10.4114437 NA 10.4744571 11.1454595 12.7022223 9.4944670 7.3161720 9.9360852 9.2423605 7.5204623 10.3617645 10.1484935 9.4127062 7.5875765 5.7239953 10.7120823 9.1565534 13.0960916 9.8146454 9.2989804 10.3539001 7.3863894 10.2952847 -1.3313362 -1.3313362 9.0018687 12.2865251 12.5954725 7.8757279 12.2923662 12.9461460 9.8101818 6.4368981 2.6687092 6.4034228 8.1705505 8.2423605 6.5994502 12.2436615 -1.3313362 10.3260317 13.3783356 2.4760706 9.0921863 11.0224115 7.8235316 9.2574279 0.6687545 14.6883296 14.1772459 1.6687092 8.0781044 NA 3.7561800 10.2834232 9.7941268 9.2242610 10.8069851 9.3552139 9.3017084 1.9906282 10.9895138 10.0939292 7.1525292 8.6024038 5.6229099 10.9442558 14.4531436 8.3035063 11.0588822 11.2297625 8.4533480 1.6687092 4.1281449 9.3906668 9.0534969 12.2339344 NA 4.3966322 7.8535884 10.0759810 10.7371556 4.4235983 7.6287153 5.0949792 10.4651585 11.4677925 3.1922731 13.1501343 6.6344974 6.4888925 11.0166114 12.4018345 12.9311752 8.4185825 10.3525851 11.0807538 10.5587115 10.8451981 4.3966322 8.9621849 11.1017770 8.2980699 -0.3313362 10.7011034 9.0317530 2.5756028 3.0842004 9.1814537 10.6566878 9.9633340 8.8915082 15.1769878 10.6830825 10.1600653 8.6771417 5.0949792 13.8274807 9.1291691 12.0894630 11.1286571 9.3863898 9.6236366 8.0196524 10.3421328 -0.348360 0.221450 0.025952 0.299310 -0.094724 -0.331910 0.170910 0.000000 -0.051316 0.053948 0.053948 0.832940 -0.081605 1.235100 0.217760 0.046984 0.046984 -0.646590 0.014664 -0.058462 0.263880 -0.055903 -0.350880 0.147120 0.147120 -0.061243 -0.061243 -0.047395 0.205800 -0.061823 -0.348360 0.209320 -0.344690 -0.062621 -0.338390 0.170910 0.170910 0.000000 0.000000 -0.360650 0.716970 -0.348130 0.053948 -0.350240 -0.350240 0.141470 0.215450 -0.092742 1.041500 0.217760 -0.061420 -0.646590 0.014664 -0.058193 -0.058462 -0.347560 -0.358170 -0.356350 -0.350880 0.147120 0.225300 -0.029994 -0.047395 0.205800 -0.336640 -0.679410 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.269 0.171 0.171 -0.336 -0.336 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.269 0.171 0.171 -0.336 -0.336 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 9.2880161 12.7229784 2.9166486 9.8799932 4.1605653 10.7418506 2.2536868 NA 7.8903002 6.5204615 0.2536263 8.6229095 2.4760706 10.8738956 9.0663879 2.6687092 8.3481935 9.4000324 8.8647006 9.4244355 9.6728705 7.6687134 10.6163502 4.3966322 8.5235816 9.3017084 3.1281449 NA 11.0952401 3.1281449 11.9938782 11.7908941 6.7928345 10.1947234 9.6488528 9.3525851 5.2980681 1.4760706 0.2536263 3.7979987 8.2020430 9.5528839 9.8311045 3.2536717 9.2206811 8.4936721 9.5778563 7.1116563 9.5189002 NA 11.1439400 3.6229069 4.0610331 8.9127678 6.9938385 4.7561747 10.1595641 9.1495035 8.8082647 1.2536868 13.2710642 NA 10.4780794 -1.3313362 7.7048872 3.5756028 7.9610346 8.9425089 12.226822 6.949484 7.963334 12.292366 10.143433 10.072258 12.243662 11.875422 8.707632 9.928456 12.493274 9.700070 9.053497 8.180466 3.668709 8.015227 12.140134 11.2649030 6.9023329 8.4824946 8.9225606 9.3402543 10.6965501 8.4402027 9.1932550 9.8146454 8.5860854 -0.3313362 3.3125635 7.8580189 9.9142660 10.7445266 9.2574279 9.8423904 12.0631760 7.0907783 9.2242610 10.2541453 11.0596883 10.0024277 11.0559228 9.6016662 -0.3313362 10.0255778 6.3411389 6.0865651 10.7371556 5.8781662 10.8050636 10.4651585 8.0459240 12.5437906 10.2806602 10.1530327 12.5587875 10.1680609 10.2667658 1.4760706 TCGA-E9-A1R5 63 0 NA 42 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 124.53.0 NA NA 3 3 NA NA 1 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.224912e-07 11.02318659 6.26829964 7.78195110 10.71314659 0.97673022 10.68266494 1.56169272 10.52009876 10.94421109 11.99807168 9.98564003 7.36619630 8.49769060 9.21991872 3.85120934 9.34379532 8.60610128 9.27976424 7.47924511 0.97673022 9.79319507 9.50682585 12.30439085 10.75783108 9.89461392 10.29415731 3.85120934 10.86320332 NA 0.97673022 7.92900033 11.62345337 12.44892776 8.38188596 13.38609139 13.35056141 8.53388918 4.69556517 0.97673022 7.31064550 8.62899226 6.35178378 8.61698949 12.77636357 0.71369581 10.64326456 13.20786580 4.32251948 9.61712213 11.08134342 8.46458455 5.82641120 -0.02326978 12.60774887 10.27749001 3.24976388 6.47924511 -0.02326978 4.19913835 9.28508359 10.40300936 10.52685014 11.01908806 9.97721423 9.45247807 4.81804782 11.35323186 9.58653902 5.79266277 9.53261191 0.97673022 8.72605531 14.64298714 9.30342871 12.41510335 12.87603863 8.63614606 1.71369581 4.91534402 9.75919696 9.18863286 11.20175122 -0.60823228 6.73163266 6.98049721 10.71314659 11.35087848 5.35756608 4.83472638 4.86751598 10.42967224 11.88300895 0.71369581 13.38374680 6.40300861 7.40300947 12.23442713 13.60966413 12.99755101 8.48717922 10.21554744 11.29716917 10.78631186 10.58469141 5.17314343 8.04820675 11.80196847 10.89262402 -1.60823228 10.30691463 9.57293437 -0.02326978 2.64045897 10.36798822 10.79479420 10.62150228 9.42037903 14.97330641 10.17109108 10.33209575 9.07214172 2.39179521 16.29716915 7.33722583 11.83446651 11.20536294 9.94876713 8.52620852 8.74823412 10.87589507 0.48079000 1.57140000 1.61530000 0.00666530 -0.00245440 0.00444110 0.58621000 -0.00055444 -0.00055444 -0.66244000 -0.66244000 -0.68058000 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00429290 -0.00439830 -0.00439830 0.02637300 -0.11678000 0.01167900 -0.02096100 0.57773000 0.57773000 -0.00498440 -0.00498440 -0.00498440 0.57987000 -0.65803000 -0.65314000 -0.00152430 0.00666530 0.00444110 0.00444110 0.58621000 0.59890000 -0.01513100 -0.00055444 -0.00055444 0.00000000 0.00000000 -0.66244000 -0.02329200 -0.02329200 -0.02329200 -0.02329200 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00439830 -0.00439830 -0.00439830 0.00166420 -0.11678000 0.01212700 -0.65557000 -0.02096100 0.57773000 -0.01532900 -0.00498440 -0.00498440 0.59458000 -0.01354000 0.00777830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.578 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.578 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 8.69670365 13.92611543 10.57386604 9.79479420 1.58241149 9.85479562 -1.60823228 NA 8.46324439 8.31362317 NA 7.94249046 6.66790631 10.24235968 8.96921094 -0.02326978 7.96921094 9.33868848 8.22625322 10.12606841 9.39474478 7.41968804 10.13619562 1.71369581 5.74050937 9.45247807 0.39176772 -1.60823228 10.99749311 2.71371781 12.47833308 11.16079347 7.72045701 10.13409154 8.23256003 9.18050047 4.50030493 -0.02326978 -1.60823228 4.29867298 8.56670786 9.31733663 9.97862195 3.71370681 7.94890099 6.38613496 10.49441401 7.73607784 9.73107545 NA 10.68295281 2.91534880 4.54152723 9.56781807 5.48707468 1.56169272 8.73385696 7.08526955 5.86751598 NA 14.06019627 -0.02326978 9.71032500 -1.60823228 8.74272138 4.09222436 7.99355266 9.10860156 12.7648097 5.1991384 9.0517780 13.3860914 10.1959131 11.7688571 12.7763636 12.4307011 9.2119610 10.6100426 13.8675156 10.2454815 9.1886329 9.1796847 0.7136958 8.2544197 11.5037328 10.813321 9.165745 8.373349 8.221505 8.767908 9.720934 4.961637 5.801174 10.757831 5.159968 2.199123 4.369062 5.726725 10.714274 10.322519 8.618194 8.012002 12.484787 4.173143 10.526850 10.099573 12.610572 9.480570 10.520421 9.528133 NA 9.227012 10.213556 3.146672 11.350878 8.860406 9.960859 10.429672 6.946371 13.107530 9.368346 10.625701 12.975629 10.068180 10.654464 2.092207 TCGA-E9-A1R6 63 0 NA 84 breast stage iia t2 n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 120.48.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.668684e-07 12.1949390 0.1304038 7.5482732 12.0878856 NA 8.4096442 0.8674221 9.7736756 11.5831768 8.5775040 10.1029220 6.4583476 9.1610878 9.8458107 8.3349919 8.3235354 10.2341456 9.0572109 6.0846171 NA 10.5245260 9.4150522 13.7108756 9.3045142 9.1620071 10.3157091 4.0690233 10.2045622 -0.4546246 -1.4544269 6.8941860 9.4650664 12.6153275 8.9280822 13.8126472 13.7458971 9.1820829 5.9717229 3.7933861 8.6088532 8.3235354 8.7862497 6.9884018 13.0265008 2.2458911 10.0388134 14.2149800 0.1304038 9.6550342 11.2652748 8.5284518 5.4761970 NA 12.9758533 9.0699999 -1.4544269 9.4387598 0.8674221 3.5898474 9.7365174 10.2045622 9.6760288 9.8343242 9.6175909 9.3688255 -0.4546246 10.4780421 10.1757253 6.9966689 6.5398118 1.3528150 11.6637504 14.5945410 8.4949788 11.5261333 10.9829502 9.3103299 1.3528150 4.4523516 7.8941866 8.7203838 10.3362140 -1.4544269 5.2869255 8.2231778 9.8492390 10.3491858 5.4643219 4.4034382 4.1893106 9.3878086 11.4941905 1.7153663 13.6105377 7.4096447 7.3103301 10.7469696 13.0309102 12.4013000 8.5255979 10.2419911 10.9356272 9.1620071 10.8687945 4.7352839 9.1332357 10.8492389 11.7501822 -0.4546246 10.8543660 9.1453710 0.1304038 2.8688250 8.9474043 10.5695590 9.8215827 9.5011081 15.7495135 11.0940393 10.0012991 7.7742771 4.4523516 15.3966216 5.1000483 11.1541751 9.8713257 10.0699999 8.7969406 7.9139647 9.9351379 -0.09881400 -0.09881400 -0.11693000 0.00000000 0.00000000 0.36395000 0.41396000 -0.12836000 -0.12836000 0.75757000 0.75757000 0.75757000 0.00652620 0.00652620 0.11038000 0.11038000 0.11038000 0.39512000 0.37798000 -0.42287000 -0.41300000 0.02567100 0.45871000 0.45871000 0.45871000 0.20509000 0.20509000 0.20509000 0.89387000 -0.09881400 -0.09881400 -0.08678400 0.00000000 0.38766000 0.37331000 0.41396000 0.41396000 -0.12836000 -0.12836000 -0.12836000 -0.01216200 -0.43094000 0.75757000 -0.46717000 -0.46717000 -0.46717000 -0.46717000 0.00652620 0.00652620 0.11038000 0.11038000 0.39512000 0.37798000 0.37798000 -0.41553000 -0.41300000 0.02567100 -0.49722000 -0.39919000 0.45871000 0.51350000 0.18132000 0.20509000 -0.84419000 -0.00097017 -0.38627000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 8.0007854 13.2250483 7.8763751 9.1857030 3.6329196 10.6118838 0.5454742 NA 8.1693398 8.3528132 0.8674221 6.8897546 5.4523483 10.3905561 9.4590957 1.8673825 4.4281022 7.9654184 7.4003270 10.7847584 9.8790945 7.3688251 10.9479374 1.5704629 10.1176848 9.3688255 1.1304038 -1.4544269 11.0082161 1.7153663 12.5283627 11.7051719 7.1228870 9.8975017 8.0631276 9.6461205 3.9717275 0.8674221 0.1304038 2.9377775 9.9232110 10.0458022 9.6798845 1.8673825 8.3836222 7.8354770 10.0383128 6.8583416 10.1369806 NA 10.8950159 2.2458911 3.8673825 9.5576846 7.0054224 1.7153663 9.8400789 7.2801676 3.6747431 -0.4546246 13.6497293 1.3528150 10.8665408 NA 8.9302421 4.7742758 7.8515198 8.7166350 14.220664 6.534143 9.356833 13.812647 9.318597 10.484670 13.026501 13.125717 8.953353 10.794275 11.894186 10.951663 8.720384 8.238945 NA 7.203670 11.813415 10.579569 7.452349 8.971713 9.601419 9.426572 9.420893 6.259704 8.525598 9.304514 7.381508 -1.454427 5.415823 7.008533 10.884752 9.368029 9.827388 9.158327 12.520321 3.452345 9.676029 10.111036 13.223013 8.942063 10.165678 9.224058 NA 8.912032 5.622274 3.189319 10.349186 7.403439 10.387416 9.387809 6.788632 12.932062 10.411578 10.077327 12.228892 10.257985 9.263135 NA TCGA-E9-A1R7 64 0 NA 645 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 124.53.0 NA NA 1 3 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24885e-06 3.815932e-07 10.87030399 6.49871839 7.44437802 10.13469366 -1.50676258 11.29136274 0.49313492 10.98844881 11.48496952 7.29399299 10.33622938 7.43267301 9.09857299 8.84403251 7.62752002 9.69582943 10.92406863 9.68415266 6.89823496 2.49308367 11.50064637 8.85064536 13.60899056 11.48762366 8.87679778 10.54871481 3.24798826 11.50239724 0.07806326 2.95251995 7.62237621 13.27869916 13.30652394 9.41046556 12.95546791 13.82408033 7.57790159 4.51546016 NA 5.07805471 8.80370622 11.70832305 7.48461508 13.43560796 4.30044591 9.45526639 13.79726648 2.58055556 8.55648843 12.71799954 8.96171737 7.45309528 NA 13.03714444 8.70862628 1.95251995 7.10780293 -1.50676258 4.47037417 9.71165665 10.66520834 9.71226199 9.09949878 10.88514252 9.35495568 -1.50676258 11.75254251 9.27034883 6.42973144 8.21419282 1.66302576 11.61947528 13.92083186 9.71427575 10.93240493 12.69926840 8.28750923 -1.50676258 5.00088789 9.50571808 9.70498173 10.46391830 NA 6.28099527 7.57790159 8.86378083 10.81980380 4.19353522 3.30044591 3.62237987 11.03685028 12.15754075 2.88541818 12.66168721 4.22101089 7.88541086 11.26086409 10.72101013 13.17455150 8.99493068 10.16064859 11.36653756 10.73048568 10.81473970 5.87679686 8.26952646 13.44733520 9.45815620 NA 9.69949732 9.97942577 0.07806326 1.66621122 10.28669671 9.66239209 10.81839891 9.61592146 14.75393949 10.05151417 10.87247181 8.57124410 7.27772816 16.24269449 4.70254673 11.39810433 9.67300248 10.32003907 9.21248228 8.90989098 10.51039944 -0.5805800 0.4837200 1.9801000 0.0211830 0.0031910 0.0155870 0.3565900 0.5114100 -0.0612860 -0.5890200 -0.5850000 0.5484100 0.0058309 -0.5826900 -0.5609700 -0.0078863 0.0465590 -0.0065050 -0.0065050 0.0090312 0.0239870 -0.0757450 -0.5824500 0.5410100 0.5410100 -0.0069195 -0.5753600 -0.5753600 3.6569000 -0.5784200 -0.5805800 -0.0134020 -0.5838200 0.0150280 0.0155870 0.0280600 0.0000000 -0.0690640 -0.6277900 0.5115900 0.2634100 -0.2557600 -0.5890200 -0.5829400 -0.5829400 -0.2706900 -0.2875000 -0.5826900 -0.5843800 0.0258120 -0.5898100 -0.0065050 -0.0065050 -0.0065050 0.0090312 -0.5808800 -0.0757450 -0.5529600 -0.5824500 0.5410100 -0.0151910 0.4938900 -0.5753600 -0.6202600 0.2579300 0.0185230 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 6.91094608 11.32103154 4.93603483 8.70132795 2.66302576 9.98444552 -1.50676258 NA 7.83960693 5.13695011 -1.50676258 7.48052769 1.81500152 10.82232919 9.88433707 1.07806326 7.94430445 9.91988230 4.04767798 9.38942592 10.26919332 7.31646075 9.09857299 0.07806326 9.01567485 9.35495568 1.30047520 4.16551806 11.08695138 3.81502202 11.51528786 11.05938536 7.40298645 10.78195954 6.65296540 8.15308938 2.88541818 -0.50696758 NA 8.17959415 9.69644146 7.87030368 10.81220106 4.75988020 9.51616864 6.71709512 9.56656555 6.07805685 9.99194269 -1.50676258 12.02739633 1.66302576 3.24798826 9.76428212 5.22766792 4.30044591 9.32914378 9.01567485 9.04959946 NA 13.50090915 2.19351945 9.67362426 NA 8.33701437 4.53748866 8.98294140 9.93500014 14.233550 6.906721 9.127905 12.955468 10.492036 11.844309 13.435608 13.891370 9.542261 11.082276 12.473590 8.772704 9.704982 9.645378 NA 8.646645 13.438309 10.6807548 6.4703742 8.4789354 9.3291438 9.8980806 10.2237207 3.4930965 8.7563625 11.4876237 5.4238303 -1.5067626 6.3818371 7.9874090 10.0156750 11.0368503 7.0780558 8.0648462 12.4277058 5.3634585 9.7122620 9.7504812 14.0431488 8.8451369 10.4022364 9.6927658 1.0780633 8.1996238 5.8745511 4.7410193 10.8198038 6.1795946 9.5591826 11.0368503 8.0283686 12.8650062 9.5230708 9.6673949 12.0914950 10.1333384 9.9642606 -0.5069676 TCGA-E9-A1RA 48 0 NA 976 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 120.48.0 NA NA 2 4 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.946798e-07 11.12419189 5.40506996 6.86741219 11.58210123 -0.08681377 10.79967495 -0.08681377 9.88116292 11.71512662 12.55142587 9.72218046 8.03992085 7.95213551 10.15876897 8.50380348 8.55887450 9.97053116 8.85866021 7.52054640 1.72058492 11.36391199 10.33422914 12.78252088 11.14713546 9.22949780 10.45334431 6.05276800 10.81219544 -1.08681377 5.27076813 7.80803425 11.13268730 13.20805233 8.05276746 12.64877226 13.11288858 10.06929925 7.74610648 5.72057124 5.65468185 8.15400744 10.37571847 7.37264744 12.70529476 3.23514496 10.40256252 13.87733144 7.31409558 9.34684345 10.49817875 7.55346111 6.70763246 0.49814873 13.29477947 8.93973964 3.30553283 8.46203800 -0.08681377 3.08314527 9.82310925 10.19456678 9.70437920 11.22183969 9.98333724 9.47259337 1.49819980 11.67227218 10.67435189 6.38082121 8.03992085 3.55706693 10.99968424 14.90190092 8.25564660 11.22297677 10.78858164 8.15639004 2.72056304 1.91322453 9.30553374 9.01124822 11.32842984 NA 5.55707306 8.19398705 9.21242416 11.44215866 5.32260600 6.47545945 5.06296356 10.02630723 12.17001463 1.49819980 13.43512334 7.25306649 7.88475969 12.74640282 13.27351467 12.53458133 7.22155522 9.82909558 11.29313605 10.70390686 11.26360295 5.40506996 9.06803444 12.46396302 11.29448876 2.23514496 10.57855214 9.41106815 1.23511432 4.04661329 9.75241995 11.16824482 9.99270103 9.90048028 14.81535578 10.19398705 9.93766336 9.06423268 1.23511432 15.16414377 10.08751774 12.69672609 11.33317643 10.15936303 9.25640190 8.93419625 10.58420874 -0.04793600 0.48320000 0.48320000 0.02721600 0.02721600 -0.24095000 -0.00022497 -0.24885000 -0.24885000 0.21868000 0.21868000 0.21868000 0.00791750 0.00791750 -0.05374600 -0.05374600 -0.05374600 0.01908300 0.01908300 -0.27139000 0.01310700 0.20081000 -0.26420000 -0.26420000 -0.26420000 0.15965000 0.15965000 0.15965000 0.24295000 -0.04793600 -0.04793600 -0.22859000 0.02721600 -0.24095000 -0.24095000 0.02525000 0.02525000 -0.24885000 -0.24885000 -0.24885000 0.28628000 0.28193000 0.21868000 -0.04698900 -0.04698900 -0.04698900 -0.04698900 0.00791750 0.00791750 -0.05374600 -0.05374600 0.01908300 0.00000000 0.00000000 -0.24229000 0.01310700 0.20081000 -0.27882000 -0.26420000 -0.26420000 0.23365000 0.15965000 0.15965000 0.24295000 -0.26131000 -0.27715000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 8.81106155 13.48087528 8.82160882 9.44849154 4.72056851 10.10242311 4.00067610 NA 8.96306484 8.36648702 -1.08681377 7.33106831 3.55706693 9.82909558 9.67143952 -0.08681377 7.86450066 9.78742920 10.79967495 9.55165213 9.33722494 8.12266961 10.66140909 2.08314527 9.30123347 9.47259337 8.01124850 NA 10.22836585 2.72056304 13.52395274 11.91339232 7.86450066 9.26525966 8.18701202 9.42793023 3.37264570 1.49819980 0.91318623 8.55526783 8.57321204 9.05914839 9.80575902 4.40506656 8.44675993 7.82010683 9.72378789 6.58564161 8.90615463 NA 9.51776937 2.72056304 3.91321495 10.37409703 7.48682537 5.25306649 8.72218046 7.17060411 5.94663964 1.49819980 14.24906015 1.49819980 10.47402672 -1.08681377 8.37674055 4.33947949 8.14683593 8.62230006 13.569261 6.296920 8.458181 12.648772 9.877557 11.054685 12.705295 12.275023 8.984678 10.716944 13.795859 10.934196 9.011248 9.508474 4.000676 6.771198 11.722582 11.13872496 7.62746166 9.15995684 9.04249934 8.07308756 10.64134082 6.80195921 8.69785095 11.14713546 6.01124739 0.49814873 7.33528137 7.56917586 11.82872221 10.27186742 8.84616921 8.94801528 12.14503741 5.83207985 9.70437920 10.49253221 10.93489026 10.41405813 10.62057532 9.26636304 NA 9.69544459 7.33106831 6.14203556 11.44215866 7.25751231 10.31454914 10.02630723 7.55346111 14.54686427 10.01519187 9.95213522 12.50917299 11.09561058 9.86012246 -0.08681377 TCGA-E9-A1RB 40 1 976 633 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 5 1 NA NA 1 2 1 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5.006051e-07 2.224912e-07 12.02965351 0.86473092 5.77163736 11.31978021 NA 10.37423888 -0.94258439 8.82143375 12.14394258 10.17989616 10.20077492 7.33351587 8.33118747 9.64563790 6.08529717 8.90523205 9.22041219 10.05174513 7.60235592 1.75783400 10.28891289 9.81603132 12.31978018 11.39626729 10.03395579 10.51887107 3.96427848 10.89344200 NA 1.05741561 7.45827126 10.67990115 12.91614977 9.08045301 10.97811667 12.50163009 9.54523170 4.56518892 2.44971983 8.13420708 8.34394962 10.06301616 8.61293962 12.73846532 1.05741561 10.25920927 13.13958229 4.46678371 9.19052103 11.44163577 7.94765622 4.51682202 0.05741561 12.40971654 8.74126338 1.05741561 6.20204936 NA 1.86473092 9.63009181 10.91731464 9.59023466 10.15113936 9.05174513 9.03824521 3.18667486 11.20443757 9.62487239 6.13420656 7.84366106 2.86475073 10.88135589 14.12053391 7.49599649 10.95088282 10.34192661 8.90679682 0.86473092 -0.94258439 8.72450328 9.27716533 12.22355474 -1.94286170 5.89659639 8.37593432 10.62082629 11.04181012 6.10724010 5.99402978 5.58877459 8.05174513 12.21860228 1.51682202 13.92802128 5.54924406 7.23481073 11.63741462 11.96597193 12.63835681 7.31948607 10.43677004 11.00740072 10.54178914 11.47563961 4.85180900 9.27534933 12.52531557 8.39612823 -0.35771432 10.48627523 10.52703348 2.22730980 2.52140257 9.36743638 11.31581046 10.06336704 9.42371388 14.86557658 10.37875610 10.19470306 8.51169099 10.17535942 13.76126821 7.84692513 12.22551532 11.58816373 10.59606561 9.36288341 8.76647557 10.81683879 0.8623500 1.0655000 1.0830000 0.2361200 0.3698600 0.4481600 1.1510000 -0.4613100 -0.4229800 1.8190000 0.9959200 1.0646000 0.2962100 -0.1177000 0.2788400 0.2788400 0.2788400 0.4059400 0.4059400 -0.3452700 0.3004200 -0.1072800 -0.4958000 -0.4655700 0.0642250 0.0093098 -0.1227200 -0.1227200 0.3201200 0.0997240 -0.2202200 -0.4352800 0.2361200 -0.5159900 -0.4183800 -0.4350700 -0.4171800 -0.4613100 -0.4229800 -0.4229800 0.1296800 0.2229900 0.1828300 -0.4559700 -0.4559700 -0.4559700 0.6235100 -0.9846300 0.1716600 0.2085500 0.2788400 0.4059400 0.4059400 0.3510400 -1.1804000 -0.4201400 -0.0932710 -0.5525700 -0.4958000 -0.4655700 -0.0611520 -0.5257300 -0.1227200 0.3201200 -0.4189300 0.1887400 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.199 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.065 1.065 -0.392 0.000 0.000 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.199 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.065 1.065 -0.392 0.000 0.000 7.6922026 12.5681558 7.2397856 8.6526493 3.6423550 10.0328815 -0.9425844 -1.9428617 8.8013844 7.5809535 0.6423781 7.7156031 7.4258982 10.5211715 9.3525866 2.8647507 3.9153679 10.0741999 7.7048498 9.4987796 9.1067705 7.2717105 10.3005657 2.3793160 10.3919442 9.0382452 6.0630153 NA 10.4606701 1.0574156 13.5692678 12.8995456 6.3927828 9.0644189 8.8452943 9.6753183 4.8122774 2.7578340 -0.9425844 4.4667837 8.5412074 8.2680629 8.7430164 1.2273098 7.2581184 7.5065401 9.7895591 5.3702759 9.5819334 0.6423781 10.8615227 3.5492502 2.8647507 10.6784591 8.1646742 2.3793160 8.7595643 6.9881291 3.1017845 3.1866749 14.1144103 -0.3577143 10.2465985 NA 9.2886128 3.1017845 7.6004236 7.5789923 12.160188 8.397242 9.157397 10.978117 9.658234 12.003201 12.738465 11.996144 9.375935 10.908945 12.977512 11.741592 9.277165 8.686748 2.812272 7.867963 11.163464 11.60861929 7.28621027 8.79040715 9.45506620 9.72274982 10.92160101 5.44109500 6.79885928 11.39626729 9.05739178 0.05741561 6.30531941 9.20661173 11.16836424 10.90033121 8.41164106 8.99697083 11.75750623 3.58095346 9.59023466 10.24659846 10.51220506 9.44379311 11.41631752 9.31654651 -0.94258439 9.56351567 7.21978323 3.51682202 11.04181012 9.12751257 11.07237978 8.05174513 7.48784405 14.00616953 10.97140301 10.83608484 12.38571597 10.47603491 10.15080919 0.86473092 TCGA-E9-A1RC 56 0 NA 1224 breast stage iiic t4b n3 m0 2-10-2014 female 2007 NA NA mixed histology (please specify) yes 10 white not hispanic or latino 136.49.0 NA NA 3 3 NA NA 1 1 3 4 1 3 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-07 3.337367e-07 11.8177316 3.7433965 7.9842715 11.1715194 -1.0115880 10.8874835 NA 10.0363099 11.6355130 11.1909343 10.1665467 8.0586255 8.3883161 8.2552911 6.3460563 9.4773487 9.7121653 8.7274410 6.5469253 -0.4266255 9.3608254 9.1132718 14.2699273 11.0215831 9.4703038 11.1881767 1.9885211 11.0219205 NA 5.6032139 7.4703034 11.3627288 12.0432782 7.8619485 12.4772859 13.8610109 9.7628796 7.3081761 4.6032168 5.9426998 8.7001713 10.9199806 7.0759668 12.9987265 5.4803588 8.8237653 13.9812657 5.4803588 9.5167338 11.6382096 9.0679890 8.8886163 2.9885029 12.5557439 10.0898235 3.4147715 8.0812613 -2.0115880 5.8526905 10.3917828 10.9313854 10.2919997 9.8650213 10.0986614 8.7525466 -0.4266255 11.3045030 9.8308547 5.6467157 9.1746186 0.5734715 11.5954878 14.3784213 8.2074068 11.5132909 11.5488372 9.4469110 2.3104274 2.6889412 9.1439551 9.4510066 11.6019485 NA 5.6251302 6.5430937 10.9223794 10.7554473 4.7698616 4.3460563 5.1074452 7.9295519 11.9833881 1.9885211 13.6835967 8.0011289 8.7450608 12.9524841 12.9626052 13.0728145 8.0108721 10.3667992 11.0101784 10.6333250 11.1437970 5.4642370 8.2435329 11.4610683 10.1653008 -2.0115880 10.3765217 9.9073677 0.9884847 4.6036560 9.4443453 11.0698214 10.1596812 10.1379339 15.2764872 10.2167219 10.6155822 8.9036370 NA 15.0293292 5.6819917 12.6308382 9.3222189 10.6050532 9.0699878 8.8764866 11.2563649 0.740430 1.864000 1.838700 0.406790 0.386180 0.354630 0.440710 -0.063838 -0.090556 1.419100 1.419100 1.411000 -0.104210 -0.104210 -0.090493 -0.090493 -0.090493 0.399610 0.418480 -0.076945 0.843760 0.468440 -0.004936 -0.004936 -0.004936 -0.493290 0.012795 0.012795 0.998620 -0.574860 -0.624840 -0.094064 0.417140 0.531510 0.311130 -0.614030 -0.145410 -0.063838 -0.090556 -0.065045 0.400250 -0.614510 1.419100 -0.123320 -0.123320 -0.123320 0.029747 -0.104210 -0.104210 -0.090493 -0.090493 0.399610 0.418480 0.474210 -1.144900 0.439460 -0.620730 -0.072140 0.000000 -0.004936 -0.089831 -0.493290 0.012795 0.979180 -0.070804 -0.568130 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 -0.575 -0.435 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.366 0.366 1.355 1.355 -0.123 -0.123 0.190 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 -0.575 -0.435 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.366 0.366 1.355 1.355 -0.123 -0.123 0.190 7.74004854 13.39597131 6.48834951 9.98462467 2.78759963 10.47885383 NA NA 8.54213382 8.08785210 3.57347148 7.24824734 4.87114874 9.97683402 9.22032560 4.25528922 6.34605625 9.72406034 8.68894403 10.12869513 9.89636768 7.91183177 10.12613593 1.79585005 11.07712701 8.75254657 3.07596041 -0.42662547 9.77232117 0.79585005 12.33238406 11.28111360 7.47433382 10.48884836 7.64314044 9.07729268 5.79586044 0.31045646 1.57347148 10.26025918 7.70618103 8.35591925 7.93248407 2.31042738 8.98033783 7.29228482 10.33667927 7.31268514 9.31493393 -1.01158797 11.10436084 2.84649332 3.07596041 10.20067845 6.19366137 -1.01158797 7.94560653 6.66798435 4.29228850 1.15840166 13.73748335 -0.01144255 10.62942711 -0.42662547 7.51010506 6.21732379 8.13570929 8.32165982 11.664113 7.296844 8.590275 12.477286 9.952845 11.595141 12.998726 12.048525 8.891550 11.382833 13.524509 10.263174 9.451007 9.284847 -1.011588 7.310433 12.502725 11.0545935 8.1203613 8.6750050 10.1058228 9.4173880 10.4914207 4.1177865 8.8046880 11.0215831 7.3013874 1.8953802 5.3635426 8.6121483 12.0339228 10.7990760 9.5373264 8.2304874 11.9992073 0.9884847 10.2919997 10.4402306 11.8770574 9.7450606 10.8130654 9.1832612 4.0328943 9.0509013 6.8462676 0.3104565 10.7554473 8.3294672 10.1646776 7.9295519 7.8665705 13.3619473 9.6210452 10.2736175 13.1081750 9.9955316 9.8703831 -0.4266255 TCGA-E9-A1RD 67 0 NA 20 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 2 2 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 10.85140472 5.22134351 7.66165555 11.16442540 -0.37351414 11.26438149 -1.95847664 10.37877885 11.92207149 7.28936326 10.11858516 8.33720442 8.75051942 8.56891261 9.08651284 9.87985170 10.57573853 9.62357774 7.13683223 -0.37351414 11.07348139 8.75568110 13.83519139 10.23588475 9.82484326 10.72881140 4.12889550 10.76444378 0.04138318 1.94833920 7.52927593 11.13617318 13.36220098 6.50904179 12.61401750 13.23584629 8.96699016 6.77952764 3.59602870 5.23125959 8.50086737 9.92827541 7.24845040 13.58739561 2.12720404 11.69170213 13.99846969 6.48851822 9.76210743 10.77020657 4.25088580 7.79799217 -0.95847664 14.10911918 10.62408343 1.21138606 7.48230459 NA 4.89941735 10.37877885 10.25058444 11.38309350 10.94362235 10.27325688 9.25636180 -0.95847664 11.65326737 9.94982832 6.14996046 8.84071719 5.22134351 11.32683791 13.51767559 9.51413153 11.99363092 11.40912343 7.72618409 1.04145327 7.10213214 7.82607048 9.08719523 12.28036284 -0.37351414 6.36786551 7.33835221 9.64969054 11.45307907 6.56107253 5.74879396 3.04143575 10.56377200 12.30360397 2.79632779 13.51536335 7.21885477 8.07898282 11.98385854 12.86887764 13.03291324 7.44870359 10.20099176 11.30000174 11.04205372 11.13220975 5.05266368 8.40228261 11.87935921 9.16361647 -1.95847664 10.10752494 9.09671805 0.36333931 3.97807662 9.99199157 10.63459336 9.75954036 9.20759885 14.83053625 9.89591452 9.43106693 9.92484263 2.28936234 16.28072654 10.44631114 12.67766378 11.43964495 10.74793171 9.26905162 8.97512630 10.40729602 -0.0033606 0.9017400 0.9071400 0.0046777 0.0046777 -0.0123000 0.4602400 -0.0019399 -0.0019399 0.0013868 0.0013868 -0.0059091 0.0066653 0.0058467 -0.0013858 -0.0013858 -0.0013858 0.0000000 0.0000000 -0.4665300 0.0081959 -0.0033243 -0.0074720 -0.0074720 -0.0074720 0.3820400 0.3820400 0.3820400 0.0267950 0.0024969 -0.0033606 -0.0037395 0.0046777 -0.0123000 -0.0105080 0.4602400 0.4602400 -0.0019399 -0.0019399 -0.0019399 -0.0029091 -0.0029091 0.0013868 0.0033299 0.0033299 0.0033299 0.0033299 0.0058467 0.0130740 -0.0013858 -0.0013858 0.0000000 0.0000000 0.0000000 -0.4665300 0.0081959 -0.0033243 -0.4776500 -0.0074720 -0.0074720 0.4725500 0.3820400 0.3820400 0.0244880 0.4287300 -0.4704600 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.46455147 11.88358958 1.50085303 9.55713549 2.36336735 10.53554124 -0.37351414 -1.95847664 7.91025836 8.78962852 -1.95847664 6.93567779 1.62639241 10.45638512 9.31697816 0.62639241 7.17329237 9.56499771 11.22181106 10.35573573 9.78323973 8.60367827 10.98907264 2.89940768 9.04986434 9.25636180 6.34521716 -1.95847664 9.90600878 3.99562923 12.41559218 12.10651518 8.34064371 10.28133255 10.54053415 9.41647518 4.45082854 -0.95847664 0.84879818 3.04143575 8.53228657 7.96921382 10.73644641 3.25088580 8.70284867 5.54128251 10.24906011 6.20130647 9.58784782 NA 12.15769841 2.79632779 7.65430449 9.92806588 6.55263529 3.36336735 9.20256759 7.21885477 6.89630455 NA 13.52977796 0.04138318 10.08138291 NA 8.72968599 5.86161549 7.97069436 8.57184212 13.0618080 5.8029867 8.9445645 12.6140175 9.9180907 11.3814248 13.5873956 12.5381022 9.2312603 10.7029911 13.2165954 8.3790577 9.0871952 7.5960242 0.3633393 7.6942806 11.5978220 10.811067 7.676247 9.073482 8.988342 8.715628 10.148323 6.255756 8.391270 10.235885 6.134192 2.899408 3.713861 7.167934 10.210108 10.179387 8.703739 7.817869 12.325898 4.727937 11.383094 10.808379 11.323800 9.461922 10.965135 9.438575 -1.958477 9.474244 6.950669 4.685290 11.453079 6.896305 10.532795 10.563772 7.221344 13.585282 10.542526 10.591461 12.938478 9.734923 9.996722 2.128887 TCGA-E9-A1RE 74 0 NA 1054 breast stage iiia t2 n2 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 9 white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.621532e-07 2.503025e-07 11.2838353 5.9230731 7.1826347 11.3407629 NA 10.8703162 0.5445843 10.1452172 11.5109222 11.0972301 9.3415740 7.2027723 8.4050274 9.0048120 12.3895021 8.2629226 10.0444068 9.5241291 6.5535494 0.8076022 10.0428119 8.2806246 13.5594881 10.9010130 8.7820101 10.7593658 4.9908188 10.5571856 -0.1924802 1.3925372 8.4050274 11.1089010 12.1352790 6.2056271 13.5196208 13.0654252 8.1459602 5.8075945 3.1295303 7.1622121 9.4705605 10.1948947 6.7064490 13.6658031 4.8075971 8.3660162 13.3686048 0.2226809 9.2377621 12.5795662 6.9334393 8.3167105 -0.1924802 13.1979883 6.1235007 1.9230731 9.2184000 1.0299829 3.6489026 9.9156842 10.4562526 9.8038334 9.7412860 9.6462741 9.1905796 0.5445843 11.5559280 9.8127520 5.1052758 5.7848756 1.0299829 11.6043110 13.8724504 10.1443326 11.5438564 11.8091209 8.0712559 1.2226191 5.0039934 8.6160235 8.9230725 10.4835524 0.5445843 6.0991500 7.6362606 9.4723389 10.3650591 3.9505524 5.0681248 3.5801817 10.5708078 11.8582376 2.4705629 13.4384692 6.7540149 8.3749178 11.0663577 11.3658567 12.3585025 7.2560558 10.9196004 10.9076006 10.4480362 10.6512548 5.0428107 8.3493374 10.6588239 11.8926252 NA 10.1250080 10.5660962 -0.7774427 3.2740081 9.3291958 10.6820645 10.6488976 9.6789874 14.8944089 10.4451260 11.5254146 7.8094730 2.2226191 15.5993179 8.1459602 11.4443710 9.5697005 9.8999121 8.3634628 8.2887221 9.5958026 0.0113370 0.0113370 0.0155870 0.0094491 -0.5469300 1.1236000 -0.0105080 0.4628000 -0.5213300 1.4101000 3.4885000 3.5983000 0.0180590 0.0180590 0.4980500 0.5633000 -0.5292000 0.0228650 -0.0044312 -0.0023021 0.4918200 -0.5213800 0.5615200 0.5615200 0.5615200 0.0850760 0.0349590 0.0732580 1.0354000 -0.4889000 0.0113370 -0.4779700 0.0127950 0.5510700 1.3769000 -0.0128510 -0.0128510 0.0220240 -0.5567400 -0.0027707 -0.5461300 0.0030522 -0.5277700 -1.2929000 -0.5135200 0.0375900 0.0435820 0.0180590 0.0255310 0.4980500 -0.5338800 0.0228650 -0.5053600 0.0308730 -0.0040162 0.5269300 -0.4965300 -0.4987500 -0.4836500 0.5615200 0.0000000 0.0850760 0.0732580 -0.4792300 0.5206600 -0.4835500 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.527 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 1.776 -1.102 0.000 0.000 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.527 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 1.776 -1.102 0.000 0.000 7.7403022 12.7676577 9.2974434 8.9858454 2.9775181 10.8304255 0.5445843 NA 8.2683928 8.1607422 NA 7.8182818 0.2226809 10.4932202 9.2940953 4.9775226 7.0775015 11.0481880 9.0875928 11.2004494 9.9678325 8.5434336 10.5694236 1.0299829 10.4127662 9.1905796 8.4124576 3.2226346 10.7393179 4.1533676 11.4748548 11.5616478 6.8519901 10.1219898 7.3259206 9.7224788 7.5823821 2.8076022 -0.1924802 0.2226809 9.3081053 9.4375590 10.4143090 3.8664926 7.7043719 7.2833292 10.3037834 7.6020114 9.7184878 NA 9.1075665 2.3925647 3.4705629 9.6012313 4.7178464 5.0555211 7.8428525 9.2470799 6.4025414 -1.7774427 13.3967003 -0.7774427 10.6259113 NA 8.8941739 4.3723810 8.1724595 8.9299921 13.669951 4.936878 9.993710 13.519621 9.964942 10.791302 13.665803 12.655305 8.715037 10.870316 12.130744 11.111566 8.923073 7.728444 1.222619 7.508035 11.626178 10.813220 5.880845 8.991644 9.568038 9.790114 10.951740 5.526413 9.410604 10.901013 4.909135 -1.777443 3.837338 7.760395 13.012014 9.577433 9.805669 10.169174 11.759609 6.055523 9.803833 10.923723 12.452879 9.376185 10.677960 9.264976 NA 8.675430 5.782201 6.135523 10.365059 7.333769 10.440536 10.570808 7.068123 13.491467 10.173553 9.967467 11.709594 10.061049 10.204913 2.222619 TCGA-E9-A1RF 68 0 NA 200 breast stage iiia t2 n2 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 1 2 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.191507e-06 7.978766e-07 11.88122751 3.69713994 8.99223961 12.15969127 NA 9.87232351 0.03421572 9.46183220 11.81798692 10.83560911 10.22193458 7.03792247 9.18476379 9.55249543 7.16345345 9.40049246 9.44002074 9.92949292 7.54460439 7.34402510 11.28919874 10.52100518 13.15294905 10.15829145 8.95601104 10.78710829 7.08583252 9.93050258 NA 0.44921799 8.53799604 10.92037482 12.50101138 7.66109613 13.44095093 12.83466567 9.23874125 5.60907824 1.44921799 5.57849195 7.99417182 8.27893028 7.30095651 12.57736314 NA 10.06115460 14.62261154 0.77112495 10.04708791 11.04539744 8.11631901 8.98933574 2.53667462 14.05164006 10.56845685 2.25655782 6.92088279 -1.55088768 4.57849195 9.44850311 10.46078433 8.97374931 10.35872581 9.31339371 10.29273620 3.77113552 10.56294986 9.79183800 7.48812694 7.81989486 0.03421572 10.27098170 15.16104937 8.97272051 10.09531631 10.49735389 8.68042880 2.44921799 4.69713438 8.71365011 8.53268709 10.54196478 NA 6.37402049 7.53932014 9.70069009 10.50889012 6.35007463 6.61411498 5.07856287 10.45131941 12.26348970 3.84152032 14.16779405 5.28209874 7.36807075 11.91923098 13.31764442 12.66466483 8.59386578 10.57752428 10.75697773 10.10342748 10.61254289 5.03417169 8.97570699 11.52050240 10.47642260 -1.55088768 10.60781733 8.93503684 1.44921799 3.77546148 10.20033331 9.46740788 10.45728606 9.48056424 15.25925205 10.75982046 9.85806805 10.08537911 0.77112495 14.26198664 6.58363341 12.68686577 11.35346594 10.40049235 9.40413101 8.03792247 10.37511070 -0.0058140 0.5208300 0.8952700 0.3530000 -0.1179600 0.0269350 -0.0066432 0.1288900 3.6569000 -0.3725600 0.3605100 -0.0092666 -0.0024938 -0.3666700 0.2991500 0.1010300 -0.3582900 -0.0138150 0.3562600 0.6950300 1.1167000 3.1505000 -0.3386000 0.1665500 1.5985000 -0.0736160 -0.0171160 0.3280800 0.9942600 -0.4153100 -0.0058140 -0.0801410 -0.0199610 0.0269350 -0.3616800 -0.0066432 -0.0066432 0.1288900 -0.4831300 -0.3730200 0.4505400 -0.3790900 -0.7672300 -0.3626100 -0.3626100 0.3660800 -0.0045695 -0.3666700 -0.3592000 -0.3698600 -0.7491600 -0.0138150 0.4089400 0.4265400 0.4362900 0.2409200 -0.3807800 0.0454240 -0.6849700 -0.3614700 -0.3471000 -0.0736160 -0.0993410 0.9810700 -0.0149160 -0.4055000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 0.000 0.000 0.000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 0.000 0.000 0.000 9.42146948 13.78169883 6.88799919 9.56099537 3.53667462 10.86574131 2.03418049 -1.55088768 8.15138040 8.76435710 NA 7.99976216 2.84153038 10.37809605 9.01145007 3.03416288 7.42648785 9.60085846 9.79516724 8.72649509 9.40852145 8.41643401 10.74612387 2.25655782 7.49633132 10.29273620 1.61913125 -1.55088768 11.92481443 3.84152032 12.59688959 12.41562300 7.98253731 9.55315100 9.45903626 9.61725293 4.87547046 3.53667462 0.03421572 6.29469794 8.19067461 9.33185074 8.49769459 3.87547537 9.62127882 6.19739954 10.28051491 5.59895469 10.23384253 NA 10.17797857 3.09306996 4.49360251 9.09841903 7.17105867 4.80675711 9.22646301 8.93905552 7.93100693 -0.55088768 13.90151326 1.25658801 10.81744131 NA 6.95700218 3.73461208 8.06207637 9.53865824 12.092681 6.368072 8.811151 13.440951 10.990546 10.851953 12.577363 14.714896 8.541965 10.665044 13.517524 10.009063 8.532687 9.664134 -1.550888 8.444975 11.150514 10.84928655 7.94106052 8.99417210 9.06023252 7.58363416 10.54517165 7.18729961 7.47987482 10.15829145 6.84152535 0.03421572 6.44920809 7.62582937 10.67019053 10.51159118 8.47573100 8.92291349 9.33032153 6.36807162 8.97374931 10.64550245 10.91706792 9.11631927 10.52234505 8.21075900 5.57849195 8.22583789 7.33795099 6.17712848 10.50889012 6.89629123 11.21428651 10.45131941 7.44920726 14.35348947 10.52902570 9.47780440 12.24939980 10.40957169 9.86018890 1.61913125 TCGA-E9-A1RG 62 0 NA 647 breast stage iiia t1c n2 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 120.48.0 NA NA 1 2 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 1.668684e-07 12.0207258 3.4098661 6.1342271 11.0637190 -1.1137230 8.3167522 -1.1137230 8.4675000 10.6859859 11.2745859 9.2710832 6.1991815 8.5337580 9.9114390 7.6936542 9.0896475 9.2753931 9.3891314 5.9523895 4.7689412 10.0693146 10.3245716 13.9759982 10.8350317 8.1577628 10.3395701 6.3375113 9.6193149 -1.1137230 -0.1137230 6.9843319 9.2493391 12.0700326 7.1900805 12.9642001 12.7806436 9.8571245 8.3980523 4.5301582 8.6005452 7.9816963 7.7160224 7.0461713 12.2575316 NA 10.5762975 13.5437296 6.0461702 10.3882909 10.5165667 8.6344924 9.1682296 4.8635817 14.8754403 11.8639372 0.4712395 7.5902030 NA 0.4712395 8.8721414 10.5832670 8.2871791 9.1969124 8.2350277 9.9856473 3.4712655 9.3579746 9.6717519 7.7096670 7.1342271 -0.1137230 10.8452147 14.6115326 7.0638685 9.1090944 9.5156561 7.9469951 3.2786242 -1.1137230 8.0810562 7.6577893 9.3209278 0.4712395 5.9948241 8.3940939 8.9086673 10.5776068 5.0761229 4.3125635 5.9197214 8.8933267 11.8753391 4.0155868 13.3063913 7.5832671 6.7750426 10.8225694 13.6237053 12.1776141 10.4137765 10.8894660 9.8898174 9.5648996 10.1997494 2.8862965 9.9395466 11.1917913 7.2914406 2.8862965 11.0711749 8.7535781 -0.1137230 1.2082051 8.4618387 7.8491955 8.1991825 9.3549235 15.6040696 10.2498868 8.6871993 7.1151186 2.4712655 15.2994316 7.0411181 11.2501605 10.3741395 9.9245327 9.1495688 6.4862124 10.8049466 0.262160 0.502030 0.517510 0.100160 0.106580 0.065513 0.099288 -0.371780 -0.863180 0.085799 -0.381560 0.542940 -0.375610 0.086956 -0.364990 0.082909 0.082909 0.519090 0.557970 -0.388280 0.111990 -0.369520 -0.362040 0.050392 0.066229 -0.838250 0.031718 -0.075812 1.262500 -0.373020 -0.361240 0.113890 -0.378890 0.051132 0.000000 0.102490 0.108180 -0.371780 -0.863180 0.371010 0.084354 -0.395080 0.068167 -0.383690 -0.383690 -0.383690 -0.371320 0.095653 0.085943 -0.876500 -0.367930 0.519090 -0.368950 -0.390630 -0.364760 0.077430 -0.365780 -0.397860 -0.885870 0.082765 -0.365900 -0.584410 -0.368160 1.232600 -0.848510 -0.388170 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 8.318841 14.107245 7.667659 9.971108 2.608762 10.892275 1.693677 -1.113723 9.565780 8.088423 NA 6.530155 3.409866 9.667659 8.719190 6.654484 7.843402 8.819990 5.627767 12.500779 9.797789 6.448543 10.637844 1.886316 8.727077 9.985647 5.278617 1.208205 11.070555 -0.113723 13.148615 12.586631 7.066209 8.603976 8.444720 9.975088 3.208221 1.693677 -0.113723 8.609107 10.082287 10.929327 8.642856 1.208205 8.624476 9.817037 10.062473 4.973763 10.348802 -1.113723 10.375144 2.056237 3.208221 9.758128 7.054521 4.278617 9.543618 7.583267 7.000042 -1.113723 14.176930 -0.113723 11.398299 NA 7.036046 10.800311 8.659439 8.964450 13.329482 7.041118 9.272162 12.964200 8.849196 11.448065 12.257532 11.113615 8.598465 10.003943 12.325611 11.074888 7.657789 9.502848 3.278624 7.134227 11.258348 10.401014 6.793190 8.535556 8.185507 8.666019 9.918531 7.572800 9.430298 10.835032 7.802179 1.693677 5.731789 8.340661 10.082902 9.562257 9.687676 9.811112 6.744281 5.171703 8.287179 11.119620 11.097275 9.807397 9.981037 6.579787 NA 9.064815 8.146043 5.394096 10.577607 5.781118 10.202134 8.893327 6.700401 13.797083 10.481091 9.638680 11.829730 10.178621 8.528351 2.208236 TCGA-E9-A1RH 63 0 NA 1052 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 1.907966e-06 5.203543e-07 12.33384779 4.25027947 6.08485727 10.01271727 -0.65653532 10.74506872 -0.65653532 9.95349122 11.19318522 5.16356716 9.97865384 6.51831482 8.85810318 8.90849140 6.92081849 10.07003317 8.85118372 10.40374735 8.25926872 4.62879109 8.78010074 10.72466178 14.19755148 9.92317652 10.22526794 10.76729295 2.34337939 11.72384082 -1.65653532 1.66530180 8.96818466 11.90300531 13.56693848 7.06448842 11.83999339 11.52127589 10.35181790 4.45191662 2.66532455 8.22297260 9.98046693 9.68156856 9.20834923 10.78840407 NA 11.90706217 7.51080768 9.99668222 8.97456631 10.86793097 7.19201263 7.05763439 -0.07157282 13.28183906 11.80576370 1.34340782 8.88931899 -1.65653532 4.40947919 10.26931454 10.43449396 7.16675661 11.46249246 9.82266419 10.73167567 0.92835137 12.03349634 9.88254799 5.55284121 8.20292406 9.89028374 9.37474587 15.73473352 7.30139102 12.01835383 12.48725070 10.15436245 1.15075462 6.02989013 9.11074612 10.47909856 11.89293326 NA 4.09827637 6.03687693 10.37233129 11.22622329 6.51331387 5.85118434 5.80282135 11.20680120 11.73584081 1.34340782 14.61006598 4.86695247 5.73570629 12.26513721 14.51554324 13.07661644 7.66080172 10.19981477 10.52516264 10.07979116 11.18436380 5.50325968 8.32638274 12.91211729 9.36991268 NA 9.60195534 9.89076586 1.66530180 1.15075462 10.36332737 9.77017807 10.36124155 11.80358910 14.78044228 10.54214117 10.47492473 7.52329848 0.34335097 12.47226964 6.58179411 12.81194963 12.59161332 10.23403349 8.46362695 8.57100513 9.51513526 0.1238800 0.1238800 0.1238800 0.5846600 0.7848500 -0.3087400 0.5581500 0.0230050 -0.1940000 -0.2198500 -0.3110800 1.8373000 0.2717400 2.0334000 -0.2258800 -0.0247980 -0.0247980 -0.2934300 0.0000000 -0.0347680 -0.2941400 -0.2918900 0.1796600 0.1796600 0.1796600 0.7480300 -0.1274600 0.6806800 2.8276000 -0.2814400 0.1238800 -0.0761110 -0.0545550 -0.0346310 0.4463000 -0.3116700 -0.3116700 0.0230050 -0.1940000 -0.1940000 0.0810330 0.0810330 -0.5969200 -0.2992200 -0.1720800 -0.1720800 -0.1720800 -0.2819200 -0.2999200 -0.5894100 -0.0247980 -0.2934300 0.0000000 0.0000000 -0.0347680 0.0179630 -0.2918900 -0.0068745 -0.2765500 0.1796600 -0.5690700 -0.3032200 -0.2210800 -0.2771500 0.2494900 0.0047190 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 7.7506567 13.0422024 2.4308473 8.5319779 2.7507351 9.8327355 -1.6565353 2.5133139 8.4202049 9.0704588 NA 9.5871583 8.3836788 11.3648898 10.0683293 3.2013673 7.1016123 8.4893214 5.4202062 9.1683479 9.1672024 9.2547813 9.7884042 0.9283514 4.9283514 10.7316757 0.6653018 1.8028136 10.9377138 1.6653018 12.1900549 11.7707021 7.1951379 9.0576347 7.7738421 10.1920121 8.5479603 0.6653018 -0.6565353 -1.6565353 8.7378520 9.1107461 8.1181764 2.4308473 8.2223902 7.3033908 9.9122954 5.8669500 10.5826894 0.6653018 11.5170664 3.7009390 1.5133391 9.4624405 3.9648514 6.2975858 7.7162543 6.0915814 6.9908471 8.7801007 13.3341137 -1.6565353 10.2332733 -1.6565353 9.8840017 2.9283514 8.4571313 9.1731119 11.60254401 7.90563190 8.36019745 11.83999339 10.32317166 11.07024595 10.78840407 9.52454152 9.03338721 10.54306160 12.80991183 9.78425842 10.47909856 8.60313263 -0.07157282 9.23441342 13.10254922 11.100362 5.354618 10.045995 8.587753 9.774364 9.791717 3.769655 7.294674 9.923177 7.769654 7.098276 4.943302 8.880637 14.348049 10.322814 8.729252 7.128024 10.254407 6.735706 7.166757 9.828212 11.089694 9.162770 10.515192 9.955336 8.307730 8.719829 8.044539 6.863025 11.226223 8.529504 9.045562 11.206801 8.299039 14.363523 10.032950 10.976839 13.305969 9.477174 9.691011 2.735717 TCGA-E9-A1RI 43 0 NA 1084 breast stage iiia t1c n2 m0 2-10-2014 female 2011 NA NA mixed histology (please specify) no 5 white not hispanic or latino 142.49.0 NA NA 2 2 NA NA 1 1 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 1.946798e-07 10.73026828 7.47919741 6.87460641 11.64536279 1.68477386 10.90830067 2.82228147 10.40895435 11.73435792 7.90781783 9.87608760 7.65747423 8.36566848 8.74763714 6.89812852 8.66434986 9.99993110 10.03350973 8.20677458 -0.63710936 11.30059509 9.13269122 13.66327755 11.72958553 9.71820457 10.65171959 5.02106658 10.76399966 NA 0.68481874 8.92318633 12.03726649 13.30390110 7.49984429 13.48491303 13.16152780 9.37268205 7.20205720 4.66663163 7.01031214 8.87361759 9.86618240 8.96740669 13.03516834 NA 10.34013339 13.59710960 1.68477386 8.97018385 10.61965189 6.73354144 7.65976975 -1.63710936 13.58414909 7.55020577 3.68478508 6.89812852 -1.63710936 4.40725077 10.09034853 11.26993192 9.35791395 11.48211886 10.13434302 9.55576267 0.36289064 11.56803581 9.97940233 5.19574523 7.74223195 -0.05214686 10.75678013 14.48608578 8.15879598 11.05895169 12.09777475 7.93650073 2.26975132 4.14420956 8.34442064 9.44033683 11.88076889 -0.63710936 6.64825547 6.68026668 10.03129539 11.38365986 6.13103792 7.25767164 4.47137608 10.71792922 11.86319747 1.36283455 13.64173848 6.37966255 7.27274641 12.90261814 12.89514853 13.27255911 7.62729603 10.07924423 11.11335117 10.79942710 11.01860782 5.24549566 8.80993658 12.07752832 11.43966910 -0.63710936 10.22122314 9.20677458 -0.05214686 3.12201002 9.45230405 10.29432977 10.52713193 9.41474210 15.17175484 10.72561924 10.48762100 8.97203232 4.61078273 14.67444218 7.75945814 13.10663604 12.78103554 9.97295553 9.13928658 8.79643909 9.59756320 0.060222 0.060222 0.060222 -0.045228 -0.029311 0.017404 0.032563 0.031859 -0.517260 0.062295 0.062295 0.071248 0.027076 0.027076 -0.108670 -0.108670 -0.108670 0.019503 0.075344 -0.049369 0.022585 -0.013815 -0.546730 0.586150 0.730000 -0.086253 0.427850 0.434790 0.052810 -0.055705 0.060222 -0.179920 -0.045228 0.017404 0.017404 0.032563 0.032563 0.031859 -0.515370 -0.540580 -0.083695 -0.024388 0.062295 0.000000 0.000000 0.000000 0.000000 0.027076 0.027076 -0.062629 -0.108670 0.075344 0.075344 0.086088 -0.049369 0.022585 -0.113720 -0.517640 -0.546730 0.586150 -0.193620 -0.539360 0.434790 0.052810 -0.011060 -0.574270 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.428 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.428 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.01300772 13.10400444 8.82535571 9.47203117 1.27548389 10.18860727 -1.63710936 -0.05214686 8.02641167 8.14748835 1.17018146 9.07624001 1.94781575 10.37652514 9.22005686 2.26975132 9.13516801 9.52713193 10.25387773 11.24434986 9.70055901 8.28766621 10.42624861 3.17021351 8.45561080 9.55576267 3.75517601 NA 10.40588081 2.53279071 12.53840304 12.11282763 8.56620135 9.77383483 9.86269934 9.78544397 4.09077723 0.68481874 1.53276578 2.26975132 8.03173869 7.59647305 10.23244731 3.94781575 5.68026527 5.65747423 9.86070539 5.75517067 10.03129539 NA 10.44766184 3.11774490 4.85470884 9.77004688 6.41063112 5.79748256 8.64014080 7.43699464 7.16375331 NA 13.52039780 0.94785314 9.87953838 -0.63710936 9.06502616 5.06329153 8.47007070 8.66320619 13.1335613 5.5723076 9.4282697 13.4849130 10.5994656 10.2059894 13.0351683 12.7081201 9.5997766 10.9867350 13.4212681 9.8927720 9.4403368 9.1782368 -0.6371094 8.2020572 11.3508280 10.82918495 7.19257590 9.31777686 9.15808149 9.10010092 10.30630235 6.54276260 7.58202227 11.72958553 6.48697496 5.50240380 5.50240380 6.16135766 11.67005431 10.07064398 8.76373290 7.78491812 11.64970001 6.26974384 9.35791395 10.69349036 10.62582918 8.95811099 10.64652064 9.27499424 -0.05214686 9.44678494 7.47367572 6.67119287 11.38365986 9.47854738 10.31340935 10.71792922 7.04584810 13.82963099 10.42422467 10.65258419 13.17257140 9.45561059 9.70936715 2.94781575 TCGA-E9-A226 45 0 NA 1038 breast stage iiia t2 n2 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 6 white not hispanic or latino 136.49.0 NA NA 4 2 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 2.503025e-07 11.07089342 2.62358597 8.14219387 10.51361687 -0.03934002 9.80611763 NA 10.19224879 11.31450955 9.20697233 9.53931471 7.82893554 9.03744318 9.43636113 7.19584364 9.39177695 9.02402263 10.14674189 7.75720797 NA 9.99221398 9.31230304 13.82313583 10.59815814 9.24294375 10.48386283 3.28255842 12.13201292 NA NA 8.05162225 11.38951115 13.04145514 8.53931471 11.65773999 13.49946321 8.39941936 5.43094758 1.83511562 6.27048222 8.66222295 9.82067999 7.98668966 13.24318519 3.54558541 9.51073312 13.01166657 6.30640261 8.65411470 10.87973923 7.80193012 5.60448355 NA 13.09433230 7.93599771 2.54559777 8.20062401 NA 3.80193465 9.95262172 11.39751260 9.84123159 11.52731596 10.65962162 9.20062377 2.07611438 11.66453119 9.18623683 4.81861030 8.99588499 11.06806266 10.83893405 14.56019182 7.30622487 11.11755337 10.92833420 10.01364845 2.46312543 1.96062291 7.57533729 10.84657817 10.80402532 1.54557306 6.65643630 6.48940806 9.70321770 11.74961777 5.08990910 5.57533654 2.37567894 10.56795788 12.00376883 2.18301004 13.14937098 3.32985552 6.26440882 12.24458409 13.70430498 13.09676430 8.50752193 10.06172787 11.35455431 11.02448556 10.79246260 4.13055203 8.58145821 14.06533556 10.06172787 1.18301004 9.90996807 8.23830250 NA 3.32985552 10.12888184 8.73431638 10.72660433 10.29899263 14.67362025 9.89185766 9.75774868 10.43568547 5.44175569 16.18217068 8.60688634 12.87251889 11.44913724 9.95262172 9.81809033 8.88345984 9.43838580 -0.1071000 -0.1071000 1.3804000 -0.5823500 2.1744000 -0.1864700 0.0374550 0.0599000 0.0285350 -0.5306100 -0.5306100 0.0762790 -0.1031600 -0.1031600 -0.0316610 -0.0316610 -0.0232920 0.0548030 0.0548030 0.0495400 0.6371900 -0.2797700 0.9501000 -0.5261400 0.1018300 -0.1229100 -0.1229100 -0.1229100 1.9386000 -0.4994200 -0.1071000 0.0000000 -0.5823500 0.0114000 -0.1864700 0.0374550 0.0374550 0.0599000 0.0285350 0.0702430 0.1849500 0.1882800 -0.7967000 -0.0047834 -0.0047834 -0.0047834 0.2077900 -0.1031600 -0.1031600 -0.0339500 -0.0232920 0.0548030 0.0548030 0.0548030 0.0495400 -0.3648800 -0.2797700 -0.5318500 -0.5381500 -0.5261400 -0.0366430 -0.1229100 -0.1229100 0.3662500 -0.4570400 0.0794470 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 8.8061178 13.9459952 8.3093558 9.0516222 NA 10.6953372 NA NA 8.1651990 8.2506466 NA 9.1548675 NA 10.4400711 8.5468420 NA 5.3414485 9.8128970 8.9350421 8.0708932 9.9991991 7.7892930 10.1082565 NA 7.7701280 9.2006238 4.5851188 NA 10.0555850 1.9606229 11.1984351 11.7195448 8.0249213 10.5905913 10.2644084 8.5814582 5.2085563 -0.6243767 NA 5.9755775 6.9977169 6.7155145 11.8543083 2.8992336 6.8144569 4.2825584 9.4090882 6.6656841 9.4186924 NA 10.0190704 2.0761144 3.5455854 10.2521169 4.9818116 1.8351156 8.8391896 8.1553844 6.0267160 NA 12.6696396 NA 9.2967623 NA 7.2429435 3.4631254 7.8972658 8.0726327 13.605836 5.183022 8.974648 11.657740 10.081298 11.073284 13.243185 11.516655 8.940767 10.845307 13.119553 9.293783 10.846578 9.735415 3.767983 7.635408 12.285746 11.28387004 7.40633258 9.63481994 9.42483288 8.03030131 10.82391308 4.89922881 8.23364604 10.59815814 6.20221396 4.07610583 6.59483366 7.03426965 11.96531627 10.23946416 6.61883916 7.20221396 12.57748272 3.76798313 9.84123159 10.09419793 11.69109774 8.62951254 11.05909842 9.29303728 6.04100199 8.62789278 8.81913710 4.56548751 11.74961777 9.41937603 10.04011242 10.56795788 7.32110913 12.55207204 8.99221383 10.35222919 12.16570810 10.11079805 10.39073163 -0.03934002 TCGA-E9-A227 42 0 NA 24 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 136.49.0 NA NA 2 2 NA NA 3 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.224912e-07 8.343418e-08 10.76925511 6.56096863 7.70021359 10.97907280 -0.08773337 10.33507643 0.91234328 9.60463569 11.57675817 9.11116515 9.71051270 7.84304795 8.27863298 9.14593062 7.75151460 9.36145958 9.92679633 9.84894884 7.77649686 7.07889265 10.33332377 9.09801234 12.61527715 10.36180344 9.88863626 10.40249324 6.43063654 10.30853028 -1.67254257 2.02779102 8.81217121 11.81418341 12.61967000 7.04159345 12.20798415 12.20501596 9.69749080 6.50227331 3.41481206 6.52210598 8.41481122 9.20232980 7.09222013 13.00589349 3.13469738 12.05154245 13.43026726 5.98555963 9.98637197 10.09346312 7.47200679 5.43587191 NA 14.10478812 11.70333806 0.32734246 7.74097612 NA 4.94205934 9.38466332 10.08390463 10.05100932 9.44564064 9.83117405 10.23799110 2.02779102 10.59208417 9.36626735 6.41481037 8.59179085 13.74878866 10.38534011 14.53754406 8.24688213 11.41960999 10.87929690 7.42801087 0.32734246 5.99977456 8.15707100 8.52947233 11.71280636 NA 5.97120554 6.85091066 9.56754336 11.43227468 4.05526508 6.73249036 4.55616575 10.30462831 11.86626479 3.08224273 13.70973598 7.02431635 7.91980545 12.58326213 11.59281692 12.67835660 7.89530444 10.68984016 10.87857600 10.50827384 10.53344703 4.63112757 8.37991635 11.62153832 11.38719978 NA 10.11443470 9.23574094 1.49728023 2.57678816 9.91090127 10.56276435 10.05611920 9.01647264 14.98504364 10.13832160 9.38466332 8.89815271 2.23422539 16.48225546 8.52824702 12.21808764 12.10973237 9.85189003 9.36489543 7.98198448 10.26846200 0.00379050 0.53116000 0.54541000 -0.00360110 -0.00360110 -0.00235530 0.00000000 -0.00207840 -0.00207840 0.00319100 0.00319100 0.00092241 0.00423000 0.00875280 0.00583090 0.00583090 0.00583090 0.00527490 -0.00083160 -0.00097017 0.00332990 0.00583090 0.00345250 0.00345250 0.00819590 0.00861350 0.00861350 0.00861350 0.01042400 0.00598770 0.00379050 -0.00152430 -0.00360110 -0.00235530 -0.00235530 0.00000000 0.00000000 -0.00207840 -0.00207840 -0.00207840 -0.00097017 0.01167900 0.00319100 0.00360760 0.00360760 0.00360760 0.00360760 0.00875280 0.00875280 0.00583090 0.00583090 -0.55276000 -0.00083160 -0.00083160 -0.00097017 0.00332990 0.00583090 -0.56455000 0.00345250 0.00345250 0.00652620 0.00861350 0.00861350 0.01042400 -0.00666700 0.01474900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0424523 12.5757949 5.2580854 9.5447002 4.5171749 9.7908727 3.0822427 NA 8.6826993 8.1946274 NA 7.8266362 2.4972802 10.7295610 8.9864525 0.3273425 9.9988894 9.3357769 11.4123228 10.7250230 9.8428610 7.3357771 11.1332937 3.5367989 8.5705225 10.2379911 9.0068284 NA 10.4289958 3.0822427 13.2316066 12.5414398 8.5282470 10.6464559 8.2417334 9.3110546 3.2342407 2.4972802 NA 4.1087084 8.6925771 11.1897920 10.3476339 5.1977121 7.9942290 5.6311305 10.6630178 4.8819386 9.5190245 NA 11.7924045 2.8509194 9.5489355 9.8510916 6.9388162 4.6127535 9.5633626 8.4592054 9.1054256 0.6492935 14.0425060 1.3273425 10.2217872 NA 8.0120971 5.8192007 8.2387405 9.5239504 13.0777141 5.1977121 9.1379200 12.2079842 10.5548771 10.9632932 13.0058935 13.1061442 9.3249584 10.4154740 13.5537982 9.8025752 8.5294723 10.1266300 -0.6725426 7.7515146 10.7687364 10.7687364 4.7367402 8.9748069 8.6447608 8.2506760 9.6179548 7.0654409 7.8291855 10.3618034 5.6582658 0.9123433 8.3046283 6.2406559 10.3003282 10.5257934 7.8291855 9.6520915 11.0227942 6.4821658 10.0510093 10.6297017 10.5678415 9.1892108 10.5050793 8.9207396 NA 9.6868069 8.2371067 6.3552542 11.4322747 7.1977131 10.8063707 10.3046283 7.1665518 14.3029053 10.6610628 10.6092784 13.0831748 9.7175174 9.8291855 3.9123145 TCGA-E9-A228 58 0 NA 381 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 136.49.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.78719e-07 2.781139e-07 12.2757959 5.0873949 6.6183811 11.4398693 -0.7953584 10.4588954 -0.7953584 10.0592314 11.4403181 6.5534803 10.1636677 7.0024145 10.0627336 10.3027847 9.4347729 7.7650852 10.2460694 9.9638085 7.3391793 -1.7953584 10.8357022 9.6784582 14.8597381 10.2264266 10.0301088 11.3554519 2.5266698 10.4059545 2.1116323 1.7897293 8.2257324 11.7473008 13.7561905 8.3933415 14.9027655 12.2635899 9.8139312 3.0121038 -0.2102290 5.4044263 8.5356692 8.4190715 7.6476959 13.8684218 1.7283124 9.5373487 14.4715208 -0.2102290 9.4891140 11.0520057 8.8674208 5.4715387 0.7896875 12.7443718 6.8083786 5.5085332 6.9529450 4.8486079 4.9462209 10.1063737 10.1413905 9.7229139 9.7336950 10.0352677 9.7554993 3.2491419 11.3262861 10.2470959 6.1354897 6.7593410 1.2047668 11.4879857 14.1949008 8.6433364 10.9533647 10.7167523 7.1991060 0.5266698 7.0627337 8.0007921 9.5199022 9.7125471 -1.7953584 6.5311818 7.2815684 11.3876124 10.6721034 6.8558041 5.7746079 5.6476973 11.2429857 12.1258496 3.5970663 13.1893490 7.3519578 7.7322298 11.6277371 11.0751173 14.6956348 7.1325306 10.6056320 11.1404701 10.7413592 10.3008088 5.2131801 8.8691999 11.7892454 11.9056257 1.3746778 9.9237134 9.2319675 0.7896875 2.8520588 9.4756319 10.6641841 10.4820399 8.8368390 14.8631593 10.2173771 10.5359494 8.5938460 0.7896875 16.2471547 8.9487454 11.0747319 10.2922154 9.8281768 8.6183804 8.0392234 9.8229820 0.00719410 0.00719410 0.00083195 0.00152550 0.00652620 0.00763920 0.00000000 0.00903120 -0.74360000 3.65690000 -0.73038000 0.00805670 0.00332990 0.01363200 -0.73275000 3.65690000 3.65690000 -0.00304750 -0.00207840 0.02946600 0.00138680 0.00013863 -0.76072000 3.65690000 2.72670000 -0.03612900 -0.03612900 -0.03612900 -0.00429290 -0.74829000 0.00719410 -0.73766000 -0.75571000 -0.34779000 0.00763920 0.00770490 0.01104300 0.00903120 -0.00567570 -0.01021200 -0.00320700 -0.00409720 -0.77606000 -0.00769030 -0.00193990 -0.00193990 -0.00415460 0.01363200 0.00956620 -0.75141000 -0.00152430 -0.00304750 -0.00207840 -0.00207840 0.00194180 0.00138680 -0.01078400 0.02426800 -0.76072000 -0.04156700 0.01810300 -0.03612900 -0.03612900 -0.00429290 -0.73714000 -0.79093000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.742 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.742 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 7.4668473 11.5629916 4.5797896 8.7554992 3.5266823 11.4525318 2.4526745 NA 8.5601035 7.8964959 NA 6.9678649 2.9051968 10.1582215 9.2326586 4.7593423 7.3080404 10.2388637 9.1183901 10.2798974 9.4690015 7.7574213 10.8940954 2.9051968 8.2061607 9.7554993 1.3746778 1.3746778 11.4047316 3.2491419 13.1297969 11.7013567 7.6098938 11.1898829 7.1618544 9.7892454 5.0121083 5.0627348 -0.7953584 3.9861105 8.9129743 9.3321021 10.1343809 2.2047668 5.9317870 6.4142066 10.1726993 6.7631739 9.9309707 -1.7953584 9.1905944 2.5970782 5.1589469 9.5184348 5.4457333 -1.7953584 8.7477845 8.7468169 4.9051920 NA 13.9838563 0.5266698 11.1265935 NA 8.4323686 6.0502427 8.1820323 9.1920166 15.945214 7.893003 9.116145 14.902765 10.333391 10.375617 13.868422 11.530620 11.870923 10.756220 12.098718 10.600287 9.519902 7.367144 4.062735 9.902155 11.206161 11.0153242 8.2367982 8.8468042 9.4425600 10.1813166 11.0618782 4.3746778 9.7026044 10.2264266 6.5623050 -1.7953584 4.5623035 9.0501093 11.4986552 9.4407668 8.6804861 8.6895756 11.6756656 3.4142032 9.7229139 10.2312760 12.4429333 9.6825108 10.8053624 9.6804859 2.5266698 9.1332784 5.6804847 0.5266698 10.6721034 6.0185340 11.3698166 11.2429857 7.3027842 14.2211038 9.6677660 10.2912206 11.6900787 10.3684022 9.8245139 1.9051968 TCGA-E9-A229 37 0 NA 405 breast stage ia t1c n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 136.49.0 NA NA 2 2 NA NA 1 1 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.668684e-07 11.3235878 7.3340712 7.4291757 11.3211100 -0.2782336 10.7561574 0.9441838 10.3392844 11.8916376 12.9733980 9.9341107 7.9792045 9.3371400 8.8909069 7.6876010 9.2525484 9.9243489 10.2528734 8.0102987 2.3067872 11.0624089 9.4565265 14.0554149 10.5688743 9.2176720 11.0679613 5.8850472 10.8427028 -0.8630212 6.2505959 8.9042113 12.7389733 13.1407237 8.1026387 12.6896436 13.4146504 9.5350636 5.9634024 2.3067872 6.8545306 8.6085298 9.5667841 9.1934921 12.5927596 0.7218538 10.8224793 13.1875959 7.3389779 8.9327722 10.7988551 6.6721297 7.5009892 -0.8630212 15.0203849 11.7219344 2.4587757 8.3105314 NA 4.4944092 10.2661374 10.9681617 9.8673246 11.5502179 8.1702776 9.5291719 5.7218183 11.5244680 10.2783230 5.6125884 8.4394935 5.4767057 10.9880179 14.4774522 8.8973748 11.2274631 11.6343321 9.0939565 1.8372974 4.1592255 9.0954070 9.6701842 11.7880183 -1.8630212 5.9442096 7.4036410 10.5232558 11.2645264 7.1026392 7.4429161 5.3752584 10.7595927 12.1600024 2.7218101 13.1376907 6.3167630 7.4153040 12.5751265 13.7025516 13.1573136 8.5962859 10.4170452 11.2014288 10.9351399 11.1212729 5.1255395 8.6386915 12.2489681 10.7732525 NA 10.3782419 9.2979862 1.1368476 4.2268630 9.7883547 10.2447254 10.4352035 9.9522377 15.0206194 10.2368597 10.0572074 9.3456984 2.7807090 14.5791014 8.8207263 12.4837837 11.2904065 9.8536738 9.2486423 8.6216772 10.0142268 0.0901410 0.0901410 0.9222900 0.0182430 0.0044411 0.0013868 0.0670880 0.0115390 -0.5721900 0.0000000 0.0000000 0.0137720 -0.0067813 -0.0030475 0.0047190 0.0047190 0.0047190 -0.5635600 -0.0056616 -0.0034627 0.0030522 0.0065262 -0.5654500 0.0109820 0.0109820 -0.0140900 -0.0140900 -0.0140900 1.4373000 -0.4188200 0.0901410 0.0218840 -0.5692200 0.0013868 -0.0080244 0.0011981 0.0011981 0.0087181 -0.5721900 -0.5819600 -0.0153290 -0.0153290 -0.5807800 0.0044411 0.0044411 0.0027745 0.0331040 -0.0030475 0.0070826 0.0047190 -0.5664400 -0.5715000 0.0015255 0.0094491 -0.0059522 0.0030522 0.0065262 0.0140510 -0.5654500 0.0109820 0.0087528 -0.0140900 -0.0140900 0.0094491 -0.0545550 -0.5604700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 9.7288443 14.2897730 9.7460332 10.5665227 2.8917497 10.4683313 1.1368476 0.1368476 8.4176251 8.2878712 -0.2782336 8.0464627 1.3067872 10.5823866 9.1654512 3.6287036 9.1112690 9.7865598 7.1536625 9.3674755 9.8512417 8.5173155 10.2243173 4.4587823 8.3608563 9.5291719 3.1812457 -0.8630212 10.6461347 3.0437469 11.9402793 12.0058699 8.7879061 9.6938394 11.8657316 9.1011954 4.7067074 0.1368476 0.1368476 7.0705450 8.4463307 9.0756989 9.6337082 4.4767057 7.0453075 5.7589054 9.6003789 6.0910503 9.4744764 -1.8630212 10.7290779 3.8092807 4.4222599 9.6805629 5.8133041 5.1255395 9.0675917 8.3883368 7.3847820 0.1368476 13.3359133 0.7218538 10.8743131 NA 8.4001237 4.6446466 8.0164378 8.7816122 13.098259 6.636700 8.522717 12.689644 10.379433 10.838594 12.592760 12.629208 9.055718 10.517045 12.934161 9.261622 9.670184 9.714283 1.596267 7.608530 12.365523 11.347526 7.903384 9.228290 9.080102 8.982345 10.518787 7.438350 9.159916 10.568874 7.082298 6.440635 6.164760 8.431567 11.386116 10.495506 7.832083 9.042993 12.484337 6.991723 9.867325 10.569657 10.934111 9.792832 10.653047 9.083761 NA 9.436246 7.067355 6.660417 11.264526 9.364470 10.466370 10.759593 7.947522 13.441063 9.993280 9.909994 12.599996 10.881898 10.519479 2.529171 TCGA-E9-A22A 74 0 NA 1189 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 1 5 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 12.2849861 5.0966962 6.5785644 10.9589590 1.9391513 9.6586749 0.2386646 9.2534327 10.9557485 7.8571002 9.7956997 7.3654196 7.7798113 9.7598245 6.8009568 9.0371864 8.8960332 10.5871663 8.0233496 5.3985864 9.1560869 10.9538187 13.6638323 10.6536642 9.1259354 10.8194443 7.5696316 10.4145762 1.5606660 -0.7612131 8.9434830 10.6837296 12.4707608 9.9308943 11.1950909 11.2360707 9.7255498 6.1929102 0.8236678 8.4061327 9.2980591 8.6363893 8.1724055 11.8103489 1.4086575 11.3707324 14.0325212 -1.7612131 9.4254604 10.6876053 6.5874430 8.0556984 2.2387257 15.4949095 12.5095276 1.4086575 7.1635269 -1.7612131 4.6816573 9.4645247 10.2800316 9.6245771 10.3168655 8.7012170 9.8744329 2.4086304 10.3673536 9.4542477 4.5241138 7.5055012 3.1929043 9.0540980 15.1428319 6.6847234 10.7576137 11.6812695 9.9473675 2.2387257 6.6180933 7.9919316 8.9784954 10.7225305 NA 7.1486078 7.3181993 9.7603151 11.4081700 7.0460697 6.6094019 5.0716039 10.7040260 11.4475587 4.5785644 14.2079663 5.4578832 6.7265547 11.9496287 14.4348365 12.4221175 8.7807792 10.5336226 11.3068212 10.3168922 10.1965423 3.5241138 8.9969381 11.6010696 9.9973544 -1.7612131 10.5353442 9.7976137 -0.7612131 2.5656947 8.6353194 11.0988317 9.8839229 8.4663306 15.5482177 9.9806030 10.6382597 7.0966962 5.2831106 14.6669113 9.1907279 12.4228152 11.2748883 9.6465135 9.3360885 7.6586749 9.9559970 -0.38929000 0.39031000 0.39031000 0.00917050 -0.00235530 -0.00024461 -0.00678130 -0.00027724 -0.40296000 3.65690000 -0.39196000 1.45890000 0.00805670 0.02718800 0.00360760 0.00221930 0.00221930 0.00388540 0.00388540 0.00277450 -0.39419000 0.00819590 -0.39040000 -0.37335000 1.84260000 0.02062300 0.02062300 -0.37279000 -0.00110870 -0.37763000 -0.38929000 0.00000000 0.34339000 0.00499690 0.00249690 -0.40008000 -0.40086000 -0.00027724 -0.40296000 -0.40296000 0.00166420 0.00166420 -0.40385000 -0.39975000 -0.39975000 -0.01257800 0.02572400 0.00638710 0.00638710 0.00360760 0.00221930 0.00388540 0.38469000 -0.01009400 -0.00456950 -0.39419000 0.00819590 0.00763920 -0.39040000 -0.37335000 0.00083195 0.02062300 -0.37279000 -0.00110870 -0.42560000 -0.42139000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 9.2499421 14.1629473 7.9952708 9.5857824 2.3729242 10.6406609 0.5606171 0.2386646 8.3406904 9.5072567 3.8825746 9.6411939 0.2386646 11.4528820 8.9120238 3.7305639 7.7661916 9.6496959 6.9902583 9.1221216 9.3282777 5.9801807 11.5657059 3.4481741 7.1152320 9.8744329 1.9391513 NA 11.6852811 3.4866372 12.8764717 12.0974728 8.6868310 9.4681344 11.0331306 9.7913838 3.3261778 1.9391513 -1.7612131 3.7933029 8.7484897 9.4334715 9.5453460 3.4866372 7.3052346 6.9040505 12.1127355 5.9666358 9.4884208 NA 10.9289310 4.1929122 3.8825746 9.7721661 7.1441014 4.8236780 9.6950692 8.6597277 8.1958166 0.5606171 13.5842932 1.6981296 11.1289790 NA 7.9040505 5.8009568 8.2610827 9.2059411 13.628498 6.210258 8.748490 11.195091 10.212412 11.112159 11.810349 10.487532 9.131258 10.629690 13.024525 9.824616 8.978495 8.244339 -1.761213 8.595167 11.230059 11.0331306 6.2159950 8.4854554 9.5763366 7.6691671 10.2313309 7.4747289 8.1136963 10.6536642 7.8497397 2.6310344 5.3261778 8.6598643 11.4934481 10.7839205 10.0351599 9.6565672 9.5060866 6.6691671 9.6245771 10.4836731 10.2156367 9.5333354 10.4678340 9.0959181 -0.7612131 9.4689093 7.5918619 6.3155300 11.4081700 9.3334521 10.5244435 10.7040260 6.6524693 13.1510427 10.4777165 10.6033966 11.9336167 10.5648633 8.9910955 2.3261634 TCGA-E9-A22B 71 0 NA 692 breast stage ia t1c n0 m0 17-7-2014 female 2011 NA NA mixed histology (please specify) yes 0 white not hispanic or latino 136.46.0 NA NA 4 4 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.283541e-06 3.815932e-07 12.36131778 6.06077374 7.14457769 11.20867234 0.67536431 10.19655037 0.67536431 9.87550563 11.03443322 7.28710470 9.96950380 6.41950350 9.38614897 9.87599610 9.24823216 9.39849147 9.22377922 10.16237874 7.44087747 2.52333613 10.09824834 10.32064082 14.69279480 10.27525539 9.53083411 10.71754920 5.09488210 10.17158928 0.93839872 2.26029670 8.42487675 10.82458163 13.14823648 8.99727067 12.59591876 12.55446633 9.33498183 4.72845388 0.93839872 6.33069463 8.68321080 6.63881672 7.80049744 12.52732584 0.67536431 10.26817330 13.45119975 0.93839872 9.75495012 10.44716218 8.87991371 8.75001922 NA 13.71253158 8.55667695 2.74573213 7.76068203 2.16075888 5.41950518 9.24671614 10.25503565 9.71096653 10.45965026 9.69215098 9.56834074 2.52333613 10.14783034 9.82203858 5.18630642 7.31051645 -0.06160128 11.11205415 14.71479290 6.75061856 10.75135651 11.05168511 8.28415180 0.67536431 6.34776840 7.38132058 8.85922603 10.32387994 NA 6.93461557 5.86911384 9.82762740 10.59211781 5.81284731 5.05385422 4.05385856 10.49552159 12.16719570 6.18630444 13.89087560 5.69326391 8.24519805 11.33408961 12.01597164 12.78719552 7.99185060 10.51894963 11.17817439 10.33462503 10.64975717 4.17741555 8.61668373 11.58628507 11.22262274 -0.64656378 10.50918148 9.20281953 -0.06160128 1.53291536 9.28415180 10.95727264 10.51423137 9.07109091 15.59250962 10.50601624 10.53301264 6.98277117 4.54323603 15.60285207 9.13641264 11.80604185 11.03618969 10.00625945 8.87206751 8.09488157 9.74983206 0.1333200 0.1259400 0.1227000 0.0186630 0.0186630 0.0384890 0.0533790 -0.0055671 -0.0055671 3.6569000 -0.6037400 1.0481000 0.1082100 0.7429000 -0.2065700 -0.2065700 -0.2065700 -0.0042929 -0.0042929 0.0351000 -0.0128510 -0.0542860 -0.4374500 0.2163700 0.7906500 0.9334500 0.3004300 0.3004300 0.2166800 0.1502400 -0.5395600 -0.0034627 0.0186630 0.0471260 0.0384890 0.0533790 0.0533790 -0.0055671 -0.0055671 0.0024969 0.1025500 -0.2672100 -0.6231200 -0.6007100 -0.6007100 -0.6007100 -0.5989600 -0.5336800 0.8247000 -0.2089200 -0.5453200 -0.0042929 0.0116790 0.0116790 0.0351000 -0.6071900 -0.0542860 0.1253700 -0.4744800 0.2163700 0.0000000 -0.6284600 0.3004300 0.2166800 0.0382060 0.1259400 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 0.418 1.041 -0.601 -0.601 0.000 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 0.418 1.041 -0.601 -0.601 0.000 8.1973356 13.0213022 5.6843307 9.6560535 1.3534362 11.0921401 0.3534362 0.9383987 7.5894287 8.4114063 -0.6465638 8.3245555 2.9972743 11.5831346 9.6775951 0.6753643 7.9533275 9.5031617 6.1543138 10.5012554 9.5406428 6.9232704 11.8696070 2.0538412 8.6341852 9.5683407 3.9972743 -0.6465638 11.0806968 1.8128268 12.5933113 12.4890436 8.8621997 10.9793516 9.5882319 10.3385449 4.8128473 3.3534080 -0.6465638 0.9383987 7.6108027 10.3778617 9.4936053 6.0187499 8.6802596 7.4302301 10.6730866 6.4929651 10.1137186 -1.6465638 9.5220866 2.3534080 4.7109662 9.3814173 7.0174710 1.3534362 9.5277161 9.0372864 4.8925756 0.6753643 14.0960397 -0.6465638 11.0796326 NA 8.7901259 5.4302317 8.7521582 8.9918503 13.326470 5.710966 9.169598 12.595919 10.654625 10.692986 12.527326 11.461776 8.913747 10.390961 12.624659 10.843263 8.859226 7.403263 NA 7.648035 11.815405 10.2110068 5.7109662 9.2183743 9.1567384 8.2929938 9.4690760 5.9308438 9.0080507 10.2752554 7.2113958 1.5233612 4.6571941 6.6587927 11.2589895 9.2565432 7.8452674 9.4801191 11.6444413 3.7109662 9.7109665 10.3930191 11.5523199 9.2907884 10.0017721 8.8412545 -0.6465638 8.2383178 7.4659843 3.6013400 10.5921178 8.0434123 9.9879170 10.4955216 7.0013406 13.5294707 11.0642210 10.2459573 12.6164636 9.4032630 8.6155094 1.1607911 TCGA-E9-A22D 38 0 NA 0 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 1 5 NA NA 1 3 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 11.12229921 4.75855903 7.31110162 11.96261947 NA 10.33606152 NA 8.75339896 11.59470128 10.46743111 9.58541177 7.43233227 8.37858835 9.12246592 6.88666598 9.55062290 9.48518448 9.62504487 7.63490251 5.70965182 10.51471987 8.94819696 12.67719686 11.65245450 9.48050628 10.46427536 9.14300533 9.91467992 -1.95567583 -1.95567583 9.55409015 10.34609715 13.39473650 6.27793455 15.15463540 13.23914902 9.48674051 5.01009950 0.04432417 5.30170470 8.66361823 10.73518621 5.48725802 13.17033399 NA 10.37186789 13.91636480 2.21424917 9.55871362 10.30963721 6.89293861 6.12113148 0.36625226 15.89530607 10.73256557 -0.95567583 8.68726929 -1.95567583 4.97505233 10.06460078 9.83303349 9.52106134 8.98975892 9.44892469 9.73343959 3.36623827 10.59385925 10.12879152 5.23414106 7.68093965 -0.95567583 9.23042952 14.08973362 7.52567036 10.62669246 11.41022751 9.65626217 1.85167909 4.41935686 7.57959049 9.16455300 10.20103037 NA 5.28272150 7.20922232 10.19279175 10.96745699 5.74475582 8.66636711 6.04431542 9.55705563 11.96829261 2.04432417 13.86982064 6.74128226 7.37747084 12.02606086 11.00413611 12.77313921 6.60655771 10.64724605 10.69603964 10.29016495 10.68523797 3.90229552 9.22298009 11.60237712 11.97412842 -1.95567583 10.28003033 9.21736766 1.74476389 1.63408208 9.15087823 10.26982389 9.32971742 9.42044072 15.49924903 10.26348377 9.47685716 7.04149489 2.04432417 15.09190780 5.45370523 12.12388333 11.65810471 9.74562172 9.66086410 7.86608949 10.16763478 -0.0873140 1.6030000 0.2338000 0.0051359 0.3068100 1.9245000 0.2372100 0.4067700 -0.0914200 -0.6875200 -0.2584200 0.2074800 0.2254500 -0.1038100 -0.0415670 3.6569000 -0.3009800 -0.0953840 0.2327200 -0.6966700 0.8071400 -0.1119500 -0.3344500 3.0940000 2.5309000 -0.2353300 0.1143300 0.1143300 3.6569000 -0.0873140 -0.0873140 0.0022193 0.0051359 0.1843400 -0.0568820 -0.1294000 -0.1294000 0.0584870 -0.0914200 -0.0872140 0.0140510 0.0237060 -0.6875200 1.7774000 -0.0221950 -0.0221950 -0.0221950 -0.1038100 -0.1038100 0.1440100 -0.4243100 -0.0953840 0.2327200 0.2327200 -0.6774700 0.6509300 -0.1119500 -0.3944100 -0.4205700 -0.2985200 0.3391800 -0.1528500 0.1143300 -0.2857200 0.1042400 -0.7209500 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.148 0.000 0.000 0.000 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.148 0.000 0.000 0.000 10.3081712 12.0979018 3.8772044 8.6132215 3.9985115 10.6548787 4.1317788 NA 9.0499397 8.1117497 NA 6.1423481 -1.9556758 11.0602529 9.1819468 3.9750523 8.4547665 9.0527438 9.0948441 10.4328707 9.5650567 6.9360984 9.9414043 3.2537624 9.8472354 9.7334396 1.8516791 -0.3707133 10.6523390 1.3662523 12.4582736 12.4029664 8.0400825 9.8029549 10.1629319 9.8297678 2.8516791 2.9985205 -1.9556758 2.4366416 8.9504541 9.5346647 10.6883968 2.9023052 4.3022679 7.2341401 10.1294557 5.1211315 9.8120858 NA 9.6184356 3.2142336 5.8058677 9.5674213 5.3462691 7.2242246 8.9757915 9.5644428 9.5624766 -0.9556758 13.6390480 3.0887013 10.4236936 -1.9556758 8.0625152 4.4537085 8.0499400 8.3017029 15.2688989 6.5912097 9.4805063 15.1546354 9.8211595 10.6020183 13.1703340 12.0883678 9.1600093 10.6332641 13.8972104 9.4425245 9.1645530 8.5950620 0.3662523 9.5083504 11.4495897 10.5909685 6.2488858 8.7176243 9.5296414 8.8604988 9.8548427 8.9421608 9.0287338 11.6524545 6.5281306 0.3662523 7.3819374 8.5583488 9.8395432 11.0485357 8.8108441 9.3458115 8.9750526 8.3017029 9.5210613 11.7206029 10.7681895 9.2963893 10.2631812 8.0215952 NA 9.4619464 7.2779345 8.5220734 10.9674570 5.8580954 10.9260009 9.5570556 7.5989041 13.5092757 10.9448047 10.3069973 12.4520477 10.0856322 9.2409172 3.2537624 TCGA-E9-A22E 56 0 NA 392 breast stage iiia t2 n2 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 4 white not hispanic or latino 136.49.0 NA NA 4 1 NA NA 1 2 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.012037e-06 5.550446e-07 11.4558719 5.4281089 6.8726392 11.1037297 1.1675506 10.2142518 NA 9.5462387 10.7556725 7.2010055 9.2497317 7.1022560 8.5966404 9.6826253 7.0172483 9.0694551 8.0804717 10.5007378 8.5868405 3.1675827 10.1208090 10.6280385 12.5274236 10.2115211 9.2761070 10.4378778 7.0046845 10.5783872 -0.4173477 5.3639805 9.4614373 11.4417665 12.7566281 10.0062613 10.9431928 12.0229702 10.2699957 4.0420489 NA 8.2210559 8.5192580 9.9124163 9.4545253 11.6244503 -0.4173477 12.0985662 12.5640089 3.1061808 9.9291338 9.7260032 8.1237169 7.1825324 -1.4173477 14.0334140 11.8195311 1.5826042 8.2282785 NA 4.9576593 8.8633909 9.9845661 10.0573399 9.0532789 9.3130903 10.0036329 0.1676148 10.1086302 9.1853190 3.5826162 8.4202478 5.4895108 10.3782539 15.3135147 6.6380116 10.9352152 10.6591016 9.2318761 3.1061808 5.5598986 8.4713631 9.2839264 11.0049477 -1.4173477 8.8029984 6.9180105 10.2417240 11.4900741 8.1237169 6.9920104 5.4529841 10.0400009 11.7640829 -0.4173477 13.6393847 5.1217780 7.2899792 12.2617702 14.3309177 12.3345824 9.5455161 10.6015156 11.2379271 10.2192446 10.4973788 3.2830624 8.4123429 12.1854349 9.3574071 NA 10.7269596 8.9781541 0.1676148 2.4515145 9.1198383 10.6098349 10.2101540 8.6819678 15.1035456 9.5741418 9.5221992 7.9511267 6.0904152 14.6755836 6.6647687 12.9920773 11.7541096 9.3190220 9.6379025 8.1198386 9.3996037 -0.398860 0.319000 0.941600 0.468270 0.915230 -0.425060 0.025110 -0.099472 0.049038 0.182830 -0.337330 1.188300 -0.156430 -0.407150 -0.086386 -0.086386 -0.086386 -0.049154 -0.102200 -0.393300 0.468440 -0.100340 -0.397860 -0.397860 0.589730 0.117410 0.117410 0.117410 0.863140 -0.044415 -0.398860 -0.184330 -0.384810 -0.119520 -0.141030 -0.420790 -0.420570 -0.220980 0.049038 -0.413440 0.227270 -0.192240 -0.555270 -0.402220 -0.409700 0.219600 0.596920 -0.405300 -0.358740 -0.402630 -0.371890 -0.049154 -0.412120 -0.416080 -0.396440 -0.408820 -0.100340 -0.351450 -0.093271 -0.397860 -0.274640 0.117410 0.117410 0.862750 -0.096572 -0.395350 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.136 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 1.188 -0.171 0.220 0.000 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.136 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 1.188 -0.171 0.220 0.000 9.7829057 14.9969419 5.5938467 10.5309873 1.7525345 10.0265995 -1.4173477 -0.4173477 7.9576593 10.1996283 -1.4173477 9.3771333 4.2264777 10.7383869 8.9022922 1.3899522 9.6187937 8.9684825 8.4591369 10.4977525 8.9518357 6.8955026 12.2260253 2.0420489 7.0904142 10.0036329 0.5826523 1.7525345 11.1706319 0.5826523 13.0796610 12.4553911 9.1964096 10.3499769 9.7431218 9.6534119 5.6379029 1.5826042 0.1676148 5.7822932 8.5641872 10.3058543 10.1825329 4.7525452 7.0504299 5.6700840 10.2443981 6.6753770 9.4560642 NA 11.1066719 3.3375113 4.6487070 9.7720245 6.0348210 3.6700812 10.1066719 9.2882524 6.5074331 -0.4173477 14.0000440 0.5826523 10.6560922 NA 7.2656150 5.4652627 8.6379025 9.0379472 12.297189 5.310540 8.096348 10.943193 10.364390 11.239268 11.624450 11.231202 9.211066 10.432025 13.152535 8.609144 9.283926 9.510398 -1.417348 7.849406 11.155083 11.0400009 5.6049875 8.6049879 8.3122409 6.7323669 10.3396308 6.4895108 7.6594358 10.2115211 7.6832824 2.0420489 6.5074331 6.7220684 11.9124164 11.1687561 8.7041537 9.1862465 9.6331489 5.8494064 10.0573399 10.9760105 9.8932328 9.6091435 10.4675537 8.5882447 0.1676148 9.5663049 7.5426218 5.9489419 11.4900741 10.6790058 10.2756713 10.0400009 6.9090494 13.8572166 10.3291344 10.6081056 12.1430723 9.9603728 9.6049879 4.1061808 TCGA-E9-A22G 47 0 NA 715 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 136.49.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.254869e-06 5.897349e-07 11.7133213 -0.6852455 6.1974880 11.1368180 -1.6850135 9.7442514 1.3148705 8.8903841 11.9567836 6.8998076 9.7701720 9.2748466 8.1990151 9.3309565 9.9947647 7.4797520 9.1246130 10.4302135 8.0896316 5.8770865 10.1677644 11.4132059 12.1672767 12.4563133 9.5502606 10.3701272 5.0563104 11.0139812 8.2646715 3.3148415 8.0393589 9.7920971 12.9669049 4.7905792 11.6061594 12.3678373 8.9899195 6.8026844 2.8998137 8.7157242 8.4607770 10.4115599 8.5863076 6.4947532 NA 11.9411242 9.1181687 7.0152846 8.7935435 11.1127089 7.8206564 5.5627736 1.1222089 14.1909866 7.4696630 -0.6852455 10.5550398 -0.6852455 2.2217224 8.7742764 10.2463210 8.9995933 9.3856366 9.8851749 9.9908017 6.3316533 11.5617338 11.7871548 3.9295543 6.2514824 -0.1002057 11.5712009 13.2656284 8.0207883 10.5863077 9.7012462 12.2135406 2.0152835 NA 8.5722326 9.0579961 12.1059059 NA 5.3916612 6.3969934 12.0717138 9.8006741 6.9730567 4.1974880 3.9587035 7.6254575 12.7224445 1.1222089 12.9333450 3.7071603 8.2081461 10.7063568 11.5408053 12.1130128 5.2921265 10.2683137 11.6134802 11.1138126 10.8199119 3.6349649 8.4947540 11.5791407 9.3489558 -1.6850135 9.4447716 9.5297710 1.7742916 4.8544695 9.5739995 8.5181928 10.9539593 8.0563115 15.0794961 11.2022558 9.8141923 5.8226384 -0.6852455 11.6932751 8.4009810 12.0597837 11.5474156 10.1905941 9.8535187 7.7966445 10.3832469 -0.7362600 0.7107600 1.4851000 0.8211800 0.0472400 0.7879400 0.5799800 0.0207630 -0.7692800 0.0351000 0.0351000 0.1503900 0.1156500 -0.7603800 0.0725400 0.0457080 0.1974000 1.1740000 0.2479300 0.5408300 -0.7495900 -0.5860800 -0.7795600 -0.7795600 0.0428740 0.5629400 1.5588000 -0.7979500 -0.7015400 0.0062481 -0.7362600 -0.7933600 -0.7474200 -0.7759200 -0.7302000 -0.7410700 -0.7482900 0.0207630 0.0538060 -0.7653500 -0.8136700 0.7013900 0.0352420 0.0696690 -0.7669800 0.0291840 -0.0810730 -0.7603800 0.0174040 -0.7494200 -0.6538900 1.2784000 -0.7147900 0.7954900 -0.7478600 -0.7495900 -0.8141700 -0.6427400 -0.7795600 -0.7795600 0.1468200 -0.1042100 -0.7979500 -0.1704400 -0.0510460 -0.0065050 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.787 -0.787 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.150 0.150 0.000 0.000 -0.239 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.787 -0.787 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.150 0.150 0.000 0.000 -0.239 6.5484644 11.2894386 2.9586942 8.8979274 1.7989629 12.8868344 2.2217224 2.7071714 9.4266325 8.3741892 5.8922744 8.6985491 5.6094654 10.8778026 10.0118123 1.6367754 2.8384073 12.2980165 6.0962049 8.9073017 8.7690308 7.0797162 10.5224692 -0.5608556 7.3204693 9.9908017 4.7242355 NA 9.4246754 3.5243019 13.2252533 13.9060164 6.7701723 10.4872723 12.3125535 10.3893207 3.9872663 2.6367754 2.1222089 5.9442025 9.2949844 9.8554572 8.6288614 5.8770865 7.5317362 4.4645899 9.9699282 7.2690406 10.4963076 6.6591411 12.3380793 2.4847826 6.7411096 10.8239418 6.0521268 0.3148705 8.5663273 6.4997199 3.8998040 3.5627675 13.9176016 NA 10.6438001 NA 9.6048636 3.5243019 8.5021969 9.0204772 9.286388 11.003532 9.559803 11.606159 11.029520 12.502893 6.494753 10.092922 9.688662 11.566327 13.023929 11.227547 9.057996 9.296412 5.973056 9.110884 10.436054 11.4454153 5.9147582 8.0680613 11.1183705 8.6513513 10.6399084 4.8694322 3.9872663 12.4563133 10.1677644 NA 9.1173610 8.9088988 12.2068183 11.5267330 7.9925645 8.7146566 6.5096008 5.7905792 8.9995933 10.2558924 11.1088544 11.6031341 11.3983241 7.9147576 NA 9.3106189 6.5661850 2.6367754 9.8006741 8.0929220 11.2207958 7.6254575 7.4578454 14.2784634 11.0569436 10.0355166 12.7490169 11.9327713 9.7247660 0.3148705 TCGA-E9-A22H 42 0 NA 733 breast stage iib t2 n1 m0 17-7-2014 female 2011 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 136.46.0 NA NA 2 2 NA NA 1 4 3 1 1 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 2.781139e-08 10.61185429 5.37873009 7.93275924 10.59948053 0.01235413 10.91666458 -0.98764587 10.10582380 12.32266402 7.18982555 9.87891244 8.11700511 8.07580161 8.57369414 8.50726185 10.24871947 10.45509066 9.70153069 6.58983538 1.18231092 10.23429545 7.48001221 13.91924989 11.18701994 9.10119438 10.85298753 5.48001302 11.02711022 -0.98764587 2.81977035 7.76059887 12.28933032 12.76222333 5.14169028 12.41241845 12.72170552 7.82938977 6.67061801 3.71284886 5.53596895 8.45638563 9.86454554 6.22185969 13.38642687 3.14169436 9.65581154 13.89674375 8.28036342 9.60343774 11.31789808 4.74032856 8.17353823 0.33433944 14.19935751 8.63354237 1.01242565 6.57082720 NA 4.47183776 10.39043017 10.66188701 12.42880799 11.56351367 10.34612065 8.63902808 0.59741199 11.91091318 9.45948941 6.18733228 9.13717381 0.01235413 12.13725455 12.88301179 9.14890412 12.20469909 11.48560464 8.54962451 0.33433944 5.48001302 8.54476202 8.99183133 13.10669018 NA 5.29780770 6.94314306 10.55640470 12.11798744 5.84529684 6.33433408 4.16215363 10.19697176 12.23489932 3.76729461 13.75041934 6.15195823 7.20716273 12.37667775 9.95198549 13.24711145 7.81168809 10.32301906 11.08370103 10.79811825 11.32571448 5.39611153 8.58699962 12.24602593 7.82297801 -1.98735982 9.83178701 9.46670562 0.59741199 2.76568325 9.74414949 11.04083039 10.40552858 9.50125064 14.92683812 9.66569921 9.83298413 9.16024709 0.01235413 16.07102167 10.25498500 12.39900976 11.09870839 10.48281098 9.15003792 8.61881164 10.39655865 0.01000600 0.78179000 0.78587000 0.00000000 -0.01381500 -0.01391500 0.02468900 -0.00830050 -0.00830050 0.00000000 0.00000000 0.01433000 0.00477190 0.00986690 0.02160300 0.02160300 0.02160300 0.00541390 -0.00637440 0.05224100 -0.00236210 0.01502800 0.01195800 0.01195800 0.01251600 0.00569190 0.00569190 0.00569190 0.02468900 0.01000600 0.01000600 -0.00235530 0.00000000 -0.00013862 -0.01391500 -0.00108220 -0.00923840 -0.00830050 -0.00830050 -0.00830050 0.00152550 -0.00175400 0.00000000 -0.00298900 -0.00298900 0.01000600 0.01000600 0.00986690 0.03538300 0.02160300 -0.72491000 0.00541390 0.00239470 0.01600600 -0.65854000 -0.00097017 0.01502800 -0.72039000 0.01195800 0.01195800 0.00353090 0.00110150 0.00569190 0.02468900 -0.00926660 -0.73899000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.99682483 11.83507668 5.16215363 8.96950826 3.59736431 9.89733997 1.81974992 NA 8.07310203 7.18483370 -1.98735982 6.94904461 1.71285987 11.07377746 8.96004307 3.53596584 7.59360700 9.53596817 9.93350330 10.19913958 10.37729329 8.36113450 10.40954612 2.59736431 8.72149024 8.63902808 4.43867211 -1.98735982 9.41701576 3.40472604 11.63102118 12.27457454 7.96660235 9.90570785 11.45522020 9.03269183 4.42179555 0.33433944 1.33433944 5.95491980 8.74796234 7.45327557 10.53988327 2.96659658 8.30107636 4.97819105 10.66860767 6.28386993 9.75766035 NA 11.32017630 2.33433944 6.87968494 9.89343988 6.79146898 3.43866546 9.02851804 7.58794549 8.06633195 NA 13.32819268 0.01235413 9.60533043 -1.98735982 7.75218660 5.87659307 7.89198961 8.57369414 13.829565 7.174798 8.867275 12.412418 10.294145 11.333066 13.386427 13.102850 9.403650 11.372019 13.502536 8.405797 8.991831 8.332078 1.182311 8.022235 11.585935 11.095221 7.697155 9.308175 9.103842 9.824584 10.165626 5.919297 8.302425 11.187020 5.937220 -0.402588 2.819770 7.392997 9.774373 10.315616 10.378182 7.707635 13.325821 5.455350 12.428808 10.713279 11.276995 8.841336 10.789456 8.991831 -0.402588 8.417761 6.736340 5.343323 12.117987 6.760599 10.041694 10.196972 7.753873 13.214031 10.780384 9.854364 13.190721 9.794585 9.967693 2.012390 TCGA-E9-A243 52 0 NA 519 breast stage iia t2 n0 (i-) m0 22-8-2013 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.31.0 NA NA 2 5 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.561063e-06 3.469029e-07 11.0875928 6.2044851 7.1003775 9.9654475 NA 10.8869024 1.6011260 10.3045157 11.3240834 9.7176884 9.3358541 7.4894193 7.9313722 9.3880425 7.8432195 9.8787002 7.8388144 10.7753020 9.6252186 6.4203409 10.0933058 8.2670268 11.7045332 11.2642920 9.8733257 10.6352027 7.9921402 11.0373740 -0.5143671 4.9230731 10.3953104 12.0994568 12.3796640 7.4301355 10.5622603 11.1530746 9.4954959 5.8893884 0.4856329 7.5264139 9.2887221 10.0571039 6.7648915 9.5810644 NA 10.1736262 9.2067665 7.2044851 9.0150978 10.0855801 9.7802881 6.9614011 0.2226809 13.9831142 10.7162081 3.2930173 7.6011446 -2.0991235 6.4514518 10.7890675 10.8025145 10.1301244 10.1417942 10.6535035 9.2237594 5.0196441 11.2377691 9.6713687 4.1861043 8.9028164 1.0706641 7.4856675 13.8235679 8.0726820 11.4970111 10.9570038 10.4220598 2.0706298 -2.0991235 8.5098834 9.7450183 11.2255885 NA 3.9230731 6.8402845 11.1180567 11.5018952 12.0150978 9.7714548 6.7586856 10.2889912 12.1061926 1.3601395 13.4241749 4.4242637 7.6589284 11.9209903 11.0057948 13.0433703 5.7955228 9.8102230 11.2655234 10.8178549 10.9698188 5.1486332 7.8165843 12.0232093 8.2338603 -1.0994326 10.0671817 9.9704902 2.5445596 2.9507670 9.8102230 10.3342903 10.5836994 9.2897983 14.6549268 10.4538541 10.7248680 8.0681231 2.6011498 14.3020177 6.2090439 12.5706971 11.9584427 9.7718400 8.9881677 9.0421734 9.3094061 -0.09999900 0.49986000 0.59206000 0.88526000 0.09779100 0.32237000 0.38304000 0.04060900 -0.08545700 0.10257000 0.10257000 0.31386000 0.06350900 0.06350900 0.35561000 -0.01161100 -0.01161100 0.25511000 -0.05347600 -0.05967300 -0.07960900 0.07009900 -0.01986300 -0.01986300 0.33642000 0.36411000 0.20543000 -0.12823000 0.09579800 -0.11744000 -0.09999900 -0.00069303 0.09779100 -0.14875000 0.02230400 -0.21210000 -0.04563500 0.04060900 0.04060900 -0.24192000 0.03582900 0.04457400 0.10257000 0.09391100 0.09391100 -0.23472000 0.07182200 0.06350900 0.06350900 0.35561000 -0.15594000 0.25511000 -0.05347600 -0.05347600 -0.05967300 -0.07960900 0.07009900 -0.13368000 -0.01986300 -0.01986300 -0.06437400 -0.07187300 -0.12823000 0.09579800 -0.09868200 0.22792000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.000 0.000 0.500 0.000 0.000 -0.127 0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.000 0.000 0.500 0.000 0.000 -0.127 0.228 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 10.71087469 11.79030381 3.14862504 9.02353287 4.98816659 8.66723362 4.60114381 4.96679497 7.93825168 7.69998672 1.90072193 8.32382084 7.76952713 10.60006036 9.61537970 -2.09912353 10.81378119 10.48566732 9.98783614 9.24333515 9.12090787 7.88369840 9.20105745 3.51540969 7.62351208 9.22375944 1.70805477 NA 9.98152233 3.90070261 12.81045728 12.24375169 8.78487527 10.47245741 10.08650939 9.59723766 5.16749040 2.94510200 -0.09927807 NA 8.95055327 8.71448595 10.02029439 4.72088585 7.87302385 5.68206478 10.58982920 6.55175593 10.26975681 5.31855908 10.79495418 5.36013598 4.75868693 9.43639820 5.59196060 9.68329362 9.25660641 10.31723848 10.12198982 -1.09943263 13.65950056 2.29301727 9.93412782 -2.09912353 8.11380883 3.94510200 9.21924767 8.89788417 11.3031200 8.7524539 9.9000002 10.5622603 10.6997840 11.9840179 9.5810644 10.3565457 9.0536235 11.4747069 13.4346732 10.3913050 9.7450183 7.9230725 0.7080548 8.8373428 10.6245790 10.7884966 4.1295221 9.1210830 8.2305013 7.4572109 9.3653680 8.2438904 6.8664889 11.2642920 8.7024131 -0.5143671 7.4837876 8.5828303 12.1349235 11.2948995 8.0479097 8.1174509 10.2330211 10.2700295 10.1301244 10.4308672 9.9811892 9.6430143 10.4655688 9.0196458 -2.0991235 8.9208584 10.2903523 10.0335258 11.5018952 9.3253961 10.3965598 10.2889912 7.8255173 14.2766097 10.2957033 10.9576811 12.3726975 9.7656647 9.5300614 5.5517559 TCGA-E9-A244 54 0 NA 21 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.529627e-06 5.006051e-07 12.78714313 5.02985481 6.38035023 10.40732396 -1.61396164 10.41459370 1.19333020 8.65512353 11.34400584 8.27016729 9.56154648 7.80173875 8.29589013 9.92418586 8.19335188 7.29888647 9.44871763 10.93409634 9.80543048 2.47344925 9.61301110 11.11837640 13.96047223 11.05621060 10.89081594 10.29288756 4.72584475 11.73845424 5.52554900 0.38603836 8.91053870 12.11115015 13.93695412 6.88982274 12.40584827 12.39547571 8.05842203 6.98591023 3.59545592 7.31080907 7.85970250 8.66560737 7.84952145 7.81644931 -1.61396164 12.46172678 10.81199957 9.25404787 9.42609489 11.29701437 8.38458735 5.94823873 1.38598316 12.91406580 7.52042303 2.38598316 8.19012789 NA 3.38599696 8.14754838 11.03390501 9.69490474 8.44669294 9.95014643 10.49452142 NA 10.20298061 10.21453017 1.19333020 6.07948478 2.47344925 9.01990036 15.72371467 7.63882758 10.81592673 10.56154648 10.43107403 2.77831373 NA 9.07337253 10.38846036 10.98474734 -1.61396164 5.16735793 5.77831373 12.00507059 11.19113622 4.40836541 4.92515444 6.19977833 10.18891715 11.75967780 -0.02899914 13.64430534 1.55591429 6.51011852 11.98358400 12.12967433 12.52042328 8.67255475 10.46781328 11.26596302 10.68368137 10.50850145 3.43039233 8.11901217 13.03278065 9.15169750 4.00070314 9.10795066 9.42148336 0.38603836 1.39138280 9.49452142 11.78954163 10.14213629 9.36041147 14.94658355 10.63599920 9.60879187 6.63866180 4.76103523 13.12588303 6.95585213 12.38626111 11.89762609 9.17144955 9.96578428 7.41942007 10.39865296 1.230300 1.590700 0.725220 -0.128400 0.931200 0.493160 -0.101190 0.233760 -0.026475 0.061758 0.061758 0.801450 0.977860 0.491430 -0.082967 0.512880 0.512880 0.569120 0.374910 0.031682 0.431380 0.097215 -0.139260 -0.138880 0.427510 0.170420 0.170420 -0.178570 0.135350 -0.444400 -0.142610 -0.087215 -0.133100 -0.805610 -0.795300 -0.795880 -0.495080 0.345470 -0.026475 0.637580 -0.425630 -0.478940 -0.841400 1.238000 0.279590 0.279590 -0.442350 -0.110800 -0.110800 -0.140890 0.101580 0.569120 0.422300 -0.412370 0.031682 -0.232540 -0.151350 -0.144290 -0.158640 -0.138880 0.575540 -0.442670 -0.178570 -0.455460 0.114000 -0.505790 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.308 0.032 -0.138 -0.120 0.567 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.154 -0.154 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.308 0.032 -0.138 -0.120 0.567 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.154 -0.154 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 7.44127929 13.54586830 5.95585213 8.86476651 3.12908515 12.09443426 1.97096406 5.85360150 9.09162923 10.77750906 4.40836541 8.44708447 2.29289952 10.95014643 9.11816451 -1.61396164 7.00070652 10.36291902 4.87785220 8.53701334 7.92918324 6.09335523 11.80490368 0.82692468 9.22441295 10.49452142 6.21888770 NA 9.12998976 3.70792229 14.22475771 12.80990072 6.67139953 10.38035034 8.73804023 9.93481885 2.38598316 2.55591429 -0.02899914 7.82894061 8.90759734 8.07424745 11.00116679 3.74354728 7.02566338 6.56092279 11.66183046 6.29888555 11.07184075 4.89378933 12.89416312 2.08644411 4.77831373 10.57555286 7.45944227 4.82894125 8.26863978 7.32851158 6.23148617 1.97096406 13.82813052 NA 10.86476659 NA 10.07643150 4.21888964 7.58075377 7.08990063 14.008604 7.120707 8.920300 12.405848 10.207488 11.268067 7.816449 11.745884 9.646328 11.095081 13.830171 12.341828 10.388460 9.081225 4.955852 8.696610 10.719152 9.767540 7.366137 8.901697 8.923215 6.274741 9.314774 4.614816 4.515277 11.056211 6.993327 2.292900 9.906616 8.398817 11.816972 9.813834 8.480075 8.669085 6.298886 5.940585 9.694905 10.205378 12.789342 10.685491 9.704540 9.233837 NA 9.448232 7.432521 5.861730 11.191136 6.824788 9.909559 10.188917 7.310809 14.771960 10.613613 11.792202 11.768216 10.880603 9.070746 1.385983 TCGA-E9-A245 47 1 NA 26 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 3 white not hispanic or latino 147.48.0 NA NA 2 2 NA NA 1 4 3 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.39057e-07 12.2766744 6.1976001 8.5027849 11.2440944 1.0820894 10.2719473 2.0821235 9.4308508 11.7394412 9.0343786 10.3790390 8.1410163 9.0536664 8.9930154 7.2653450 8.5083875 11.4044265 9.8503070 6.1410158 1.8190959 10.4957507 9.2436746 13.8291268 8.7474586 9.6783125 10.9038968 3.9565957 10.0670159 1.0820894 2.0821235 7.1192119 12.5437727 13.5496434 5.9728948 12.6107396 12.5938754 10.8667576 7.0517495 4.4971589 5.7825632 8.0324354 9.0421247 7.6056847 13.6218470 4.7450867 9.2335622 13.6339111 4.3045183 10.2894381 10.9673106 6.2114055 7.4744401 -0.5028731 15.0364990 8.4100498 4.0207244 7.2653450 2.6670746 4.1975981 9.5319592 9.8612949 10.9581280 10.5236837 10.0029718 10.1845359 1.4971780 11.1007866 10.4122927 6.6869851 8.0821230 9.9390670 11.0343786 14.4453449 8.9567354 11.9213265 11.0004891 6.3300510 1.4971780 1.8190959 8.6109023 8.8303155 10.2301755 1.0820894 3.9565957 7.6620673 10.0382569 11.1984667 9.0421247 4.4971589 3.8190857 10.3582471 11.8849084 2.3045110 13.6369514 7.4100493 7.7779312 12.4184433 11.5852859 12.7213127 9.2148366 10.7900570 10.7929292 10.7854496 11.1854106 5.3454070 8.7756096 11.6392673 11.1616075 0.4971269 10.6238648 8.7894818 3.0821235 4.0194706 9.8247128 10.3101397 10.2899505 9.1553718 15.1290762 10.8770800 9.1063389 7.4571625 3.6670860 17.0023748 5.5415551 11.6073173 11.3367577 10.1091072 9.3889440 7.7114791 10.5606632 8.3195e-04 4.5428e-01 4.5428e-01 -7.8863e-03 -9.4046e-03 -8.2515e-03 0.0000e+00 2.7728e-04 2.7728e-04 -6.7813e-03 -6.7813e-03 -6.7813e-03 1.2481e-03 5.1359e-03 5.5459e-04 5.5459e-04 5.5459e-04 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -4.1585e-04 -1.5243e-03 -1.5243e-03 -1.5243e-03 -4.7079e-03 -4.7079e-03 -4.7079e-03 -2.7707e-03 1.2346e-05 8.3195e-04 4.3021e-03 -7.8863e-03 -8.2515e-03 -5.2610e-03 0.0000e+00 0.0000e+00 2.7728e-04 2.7728e-04 2.7728e-04 3.6202e-03 8.3195e-04 -6.7813e-03 4.4411e-03 4.4411e-03 4.4411e-03 9.6189e-04 2.5533e-03 6.5262e-03 -8.0244e-03 5.5459e-04 -1.1087e-03 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -4.1585e-04 -4.1585e-04 -1.5243e-03 -1.5243e-03 9.7064e-04 -4.7079e-03 -4.7079e-03 -2.7707e-03 -1.9399e-03 5.5459e-04 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4744401 11.7337725 8.2850628 9.8634824 1.8190959 11.5264474 3.1975981 2.4971525 8.7331743 7.7066134 1.8190959 6.7123537 1.8190959 10.6076435 9.0285418 2.4971525 7.5899178 9.1589383 12.2871014 10.6770693 9.8261156 7.6315867 10.2702994 3.7450867 11.0300032 10.1845359 4.0821235 -0.5028731 10.7397389 3.8190857 12.9640015 12.5769783 7.7732850 11.0617861 7.6720858 9.4145324 6.3173384 -0.5028731 1.0820894 3.8190857 9.2335622 10.1544787 9.9728937 5.0517506 9.9038648 7.1553718 10.5659385 4.4971589 9.8980396 0.4971269 13.3058228 2.3045110 11.2310229 9.8426764 7.4038105 4.6670860 8.5739758 7.7403340 10.6820356 1.8190959 13.5713853 2.6670746 11.5087369 -0.5028731 9.3457831 5.3798046 7.4744401 9.7662869 12.079385 4.020724 8.964766 12.610740 10.298230 10.614803 13.621847 13.642854 9.317339 10.407053 12.824151 10.513272 8.830316 7.773285 1.819096 7.910788 10.796941 11.101250 7.997006 8.807773 9.350470 8.596087 10.282506 6.036319 9.804361 8.747459 7.927613 3.667086 7.104491 6.685007 9.230176 9.417513 7.796368 9.795223 9.990015 4.706613 10.958128 10.688836 11.306124 9.571302 10.554475 9.495751 3.197598 10.424975 9.889950 5.225082 11.198467 11.014338 11.641181 10.358247 7.176640 14.075710 10.769790 10.318934 13.236413 10.127427 10.032436 3.745087 TCGA-E9-A247 59 0 NA 828 breast stage ia t1c n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 0 white not hispanic or latino 142.49.0 NA NA 1 3 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.952849e-07 1.39057e-07 10.9545394 4.7421518 7.1658908 10.8982236 NA 9.6469748 NA 8.1959337 11.5016307 9.2107235 10.2086199 7.7206649 8.7334018 8.2128242 6.2029955 9.5839974 9.4197411 9.7949850 6.7954527 1.6624334 10.9221702 8.7107899 12.6394466 11.8976797 8.5671301 10.2694209 4.2904613 9.5439581 NA NA 6.4414005 11.4719759 12.7070694 5.9444626 13.0123615 13.6801211 8.7709512 8.5294247 4.8323533 8.5539345 8.8947390 7.8859898 7.7265574 13.5578301 1.7879757 9.2864746 13.8769944 4.4509209 9.8544283 11.0601988 6.6250600 2.7265479 -1.7968615 13.2085019 7.0702745 2.2029818 6.4269977 NA 2.2904539 9.1916801 10.9086277 9.8117122 9.3704134 9.5067761 9.0848740 2.2904539 11.4593514 9.8094006 5.5428462 7.6500788 3.3322783 12.0804712 13.5944403 6.9561787 10.8407523 10.7380276 11.1017856 1.2030132 0.2030132 9.2329727 8.3463785 9.9440408 -0.2120661 5.1455104 7.1248358 10.8923382 10.6863073 4.9974098 4.2904613 4.5780330 9.3438251 12.3939003 3.2473959 13.5108365 5.3219353 7.8066218 12.0325199 12.1698612 12.5759964 8.1888371 11.0249686 11.0103503 10.7562118 10.4321146 3.9578867 9.7879579 11.4153397 12.5332120 -0.7971122 9.9880390 9.3251761 -0.7971122 3.7037984 8.6706010 11.0983813 9.7728510 9.8400729 15.6363852 10.6986006 9.4197411 5.4414005 2.0103502 14.9224777 6.6624263 11.9108936 11.4669980 10.2747929 9.8172451 7.5605476 9.8508854 -0.3871600 0.3719900 0.3719900 -0.0074720 -0.4086000 0.3869000 0.7470800 -0.0026322 -0.0078863 1.3554000 0.3621500 0.3621500 0.4173100 0.3813800 0.3800600 3.6569000 3.6569000 0.7408100 0.7117400 -0.8442700 0.3875000 -0.8252900 -0.0033243 -0.0033243 0.3787400 -0.0134020 -0.0134020 -0.0134020 1.1115000 -0.3871600 -0.3871600 -0.0140900 0.0000000 0.3708400 0.3623300 -0.4226500 -0.4131600 0.4042700 -0.0162920 0.3782500 -0.9319700 2.1551000 0.3723200 -0.4052800 -0.3926300 0.3577300 0.0029133 0.3813800 -0.8291100 0.3800600 -0.8228500 0.7408100 0.5855500 0.5855500 -0.7962800 0.3875000 -0.4130000 -0.8498200 -0.4174000 0.3787400 0.0108420 -0.0134020 -0.0134020 1.0913000 -0.3804400 -0.8709900 0.417 0.417 0.380 -0.443 0.715 0.715 -0.769 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.387 -0.015 1.091 1.091 -0.393 -0.826 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.102 0.417 0.417 0.380 -0.443 0.715 0.715 -0.769 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.387 -0.015 1.091 1.091 -0.393 -0.826 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.102 7.9810723 12.4398317 8.6878183 9.5599974 3.0609812 10.5996001 1.9034240 1.3728964 9.6913375 7.8999629 0.2030132 8.7572003 0.2030132 10.4875303 9.1838490 5.1455104 6.6868114 9.7879579 7.0135672 9.6685617 9.9019735 7.8158636 10.5561422 -0.2120661 9.8355362 9.0848740 3.7879548 -1.7968615 9.9198148 4.3928188 11.9336777 11.8400730 7.3451027 10.0235732 10.8015132 9.8807149 3.9309171 0.7879339 1.6624334 1.3728964 9.6160943 8.7196804 10.0841093 3.3729242 5.8528254 6.7575847 10.4038939 5.4509242 9.9587174 -0.7971122 10.8912456 1.0103502 4.2253598 10.5575367 6.1354466 2.5249162 9.5850790 6.6376233 5.6459379 NA 13.9077095 0.5249663 10.2977329 -1.7968615 7.6988505 4.1098871 8.0374662 7.5136084 15.179135 7.578034 8.823215 13.012362 9.402668 10.796386 13.557830 11.970869 12.900126 10.747718 12.433991 11.040426 8.346379 8.892993 3.984352 7.795453 10.984355 10.890152 8.757584 8.783225 9.588318 9.285144 10.259149 4.269086 4.311518 11.897680 5.678728 2.290454 8.003895 8.111388 11.468024 8.778535 8.337422 8.830529 7.225363 3.694847 9.811712 11.133363 11.438262 8.470952 10.385700 7.214223 2.726548 8.987630 6.751663 3.629263 10.686307 5.332278 11.037466 9.343825 6.332278 13.290334 10.192035 9.806158 12.530688 11.116820 9.763328 1.903424 TCGA-E9-A248 51 0 NA 59 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 2 5 NA NA 2 6 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.059253e-07 5.562279e-08 11.6197491 4.0167192 10.1603546 14.2994573 NA 10.7654459 0.9578403 10.1285822 12.2667304 7.6016787 9.8811501 8.3212273 9.3292362 9.9308024 6.9351026 9.9921631 9.8717094 10.1410444 8.5072864 3.5823151 10.0732998 10.0266009 13.2377233 11.2414898 10.3069195 11.0430738 8.4787688 11.4157148 NA 3.4172584 10.1554488 10.7432751 13.0019890 6.3840878 12.2993415 12.5428634 8.1721419 3.5823151 NA 6.8074889 9.3798873 10.0063095 5.7127113 12.2542609 NA 10.3601241 9.6419869 7.6697766 9.3212273 11.5979169 6.9690503 5.3153742 2.5427781 14.2883899 9.6495661 0.3728407 9.1218914 0.3728407 7.0310720 10.1570860 10.5774313 9.5484097 10.8427563 12.4475870 9.7369948 1.3728407 11.7398653 9.9746310 4.7304117 7.8746974 9.6749277 11.8020053 13.9633595 8.3923118 11.4869278 11.3590577 9.0488171 -0.6270479 2.5427781 8.9587615 10.0741666 13.0303461 NA 3.9274509 6.1802155 10.9296056 10.8274165 5.9197548 8.5688473 5.8404658 10.9774134 12.2414898 -0.6270479 13.5969749 3.8322926 7.6112646 11.8308822 12.7421848 13.3702161 8.0505795 10.3150080 11.0654756 10.4712048 11.4129786 5.6112639 8.1058755 11.8593181 9.5327315 4.5823151 9.3175723 10.1176940 0.9578403 2.0744027 10.2316183 8.9709126 10.9257693 9.2805019 14.6147130 9.7554842 10.8374059 7.6536312 2.0733061 14.2655690 9.7854299 13.4596598 11.9946831 9.6034811 8.8687152 8.2009967 9.7733713 0.0770370 0.0770370 0.1786400 0.0615860 0.0615860 -0.2116200 0.0076558 -0.0652400 3.5881000 -0.4796000 -0.4531300 0.7063600 -0.1347700 -0.1347700 0.0067417 0.0067417 0.0067417 -0.1980600 -0.0379590 0.2156900 0.1072400 -0.2200300 0.0333450 0.0333450 0.0333450 0.6190700 3.6569000 -0.0156660 3.6569000 0.0770370 0.0770370 -0.0206110 0.0615860 -0.2116200 -0.2116200 0.0076558 0.0076558 -0.0652400 -0.0652400 -0.4592300 -0.1003900 -0.0798020 -0.4648800 0.0084116 0.0084116 0.0084116 0.0344730 -0.1347700 -0.1347700 0.0067417 0.0067417 -0.1980600 -0.0379590 -0.0379590 -0.1665600 0.1072400 -0.2213400 -0.1986200 0.0333450 0.0333450 -0.2275400 -0.2191600 -0.0156660 0.1169000 -0.1141000 -0.1734600 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 10.5670014 10.9746309 4.5823151 8.7260069 6.2493771 11.0988653 4.6207858 -1.6272707 8.1160117 6.5327315 -1.6272707 8.4859903 5.3035981 10.6296585 9.7249036 2.3728685 10.1950326 10.1664634 8.3458399 9.3328621 8.3781761 8.0239118 9.4956882 2.8322824 9.3917557 9.7369948 1.6947911 NA 10.5156054 1.5428028 12.7348724 12.8107422 8.3153747 10.2292857 10.1352422 11.3842621 6.8526406 2.0733061 -1.6272707 5.6674806 9.0094846 8.0540985 9.7705347 6.6992893 9.3772984 5.8964220 9.9398655 7.1344109 10.2432248 4.1007843 10.3903645 4.7304117 2.9578218 9.2532320 5.4412079 9.6148433 8.9699816 9.4294978 10.5302070 2.6207975 13.5340314 0.6947465 9.9667181 NA 9.2331712 3.6947911 8.8727060 8.1310832 9.011766 11.592634 8.233947 12.299341 10.673164 10.395921 12.254261 8.207331 9.699290 11.047273 13.277824 9.722141 10.074167 8.038196 1.694791 8.386881 12.705946 11.205750 6.350140 9.269193 8.820976 10.029732 10.893275 8.226170 7.255504 11.241490 7.389668 2.372869 3.957822 9.119148 12.130042 11.034193 8.261603 8.039972 9.797551 10.792820 9.548410 10.829984 10.481385 9.793873 10.934387 9.565769 NA 9.780542 9.970643 10.726558 10.827416 6.100780 11.099025 10.977413 8.281253 13.840049 10.482364 10.852388 12.952117 10.447336 10.193438 5.935101 TCGA-E9-A249 45 0 NA 29 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 142.49.0 NA NA 3 2 NA NA 1 4 3 4 1 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 1.39057e-07 10.60020795 4.80505508 7.05727588 11.39821867 NA 11.05459496 0.66211433 9.73713206 11.53874349 10.61605254 9.61871677 7.80335427 8.42917949 7.39228565 8.92732286 9.39285189 9.98552875 9.99637194 6.04292007 1.77757752 10.76931570 8.92654122 12.21708712 11.03169603 9.65456497 10.39228576 5.31554087 11.07166635 -0.92275700 5.92262603 6.85521359 11.01377412 12.99231530 7.18827134 13.15014798 12.79341975 9.15861953 7.06012955 3.72098979 4.60069793 8.32980172 10.80207630 5.53656894 12.96545133 1.39906169 9.67797821 14.42614087 5.26695890 9.50116603 11.11227887 4.92262603 4.36254002 -1.92303052 13.43942521 8.72156030 2.72100073 8.21156225 NA 2.88450024 10.15428561 10.25953049 10.86033907 11.02769206 9.94441485 8.66865846 -1.92303052 11.21476777 10.18990139 6.27189250 8.77844252 2.53657516 12.47801560 14.00817371 8.37485474 11.41893292 11.11227887 9.12562295 2.88450024 -0.33788567 9.33216481 8.92810438 11.48068081 -0.33788567 6.05441656 7.21668766 10.23826799 11.14641810 7.36253827 5.39001758 4.07713189 9.66819094 12.23850428 1.53655030 13.40658215 7.95058039 7.80165017 13.50611782 12.56132969 12.59701807 7.54270224 9.89451965 11.36888242 10.89048644 10.62619882 4.80505508 8.56195920 12.05923845 11.01432607 0.07710624 9.94865647 9.21796593 -1.92303052 3.57507025 9.18696673 11.66221605 10.25362096 9.60949200 14.96951295 10.26726951 9.88851085 8.91870048 1.53655030 14.52169814 11.11828191 13.01478583 11.66151149 10.08696471 9.01671526 8.54677796 10.93292153 0.7090700 1.0874000 1.0838000 0.0094491 0.0094491 -0.3063900 0.2231400 -0.3170400 -0.3170400 0.0033299 0.0033299 0.0033299 0.0047190 0.0087528 0.1416200 0.1416200 0.1416200 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.3232100 -0.0220580 -0.0220580 -0.0220580 0.2283900 0.2283900 0.2283900 0.4183100 -0.3168100 -0.3068600 -0.2947300 0.0094491 -0.3292000 -0.3206300 0.2231400 0.2231400 -0.3170400 -0.3170400 -0.3170400 0.2816900 0.2785300 0.0033299 -0.0667880 -0.0667880 -0.0667880 -0.0667880 0.0087528 0.0087528 0.1416200 0.1416200 0.0000000 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.3232100 -0.6081500 -0.0220580 -0.0220580 0.2476200 0.2283900 0.2283900 0.4183100 0.0045800 -0.6761900 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 -0.317 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 -0.317 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 7.29630505 11.87307432 7.93822285 9.21668742 3.20642443 9.68862204 -0.92275700 NA 9.00565458 6.54066122 -1.92303052 5.82533026 2.46944320 10.22179445 9.59037035 0.39911639 6.78103966 9.67379190 8.45434659 10.29569938 9.36447920 7.43688557 9.75661620 1.77757752 10.74911940 8.66865846 7.75309304 -0.92275700 10.23889789 2.53657516 13.92414455 11.80951561 6.27189250 9.77844269 9.07290327 9.32268892 2.16459322 1.88448070 0.88448070 9.32090522 8.94981096 8.79309799 10.29024042 2.16459322 7.18304479 6.65078322 10.55817874 7.42364960 9.39058601 NA 10.06440017 0.39911639 3.56899277 10.67269671 7.51401413 3.39906169 7.57698235 7.16989294 4.69184679 0.07710624 14.48048111 -0.92275700 9.86054370 -0.92275700 9.61483994 4.03133344 7.93511730 8.07995138 13.266642 5.953654 8.998977 13.150148 10.177470 11.507589 12.965451 12.048231 9.515928 10.862384 13.760323 11.361960 8.928104 8.856035 -1.923031 7.733561 11.158453 10.970058 8.126985 9.258910 9.313150 9.375199 10.364430 5.805058 8.665851 11.031696 5.452177 5.469453 6.434688 7.675896 11.429455 10.493406 9.481746 8.851923 11.516318 4.452174 10.860339 10.541682 10.609979 9.134451 10.602657 9.437435 -1.923031 9.473195 7.129107 4.226886 11.146418 7.631725 10.563192 9.668191 7.383198 14.283903 9.817338 10.617749 13.169563 11.073610 10.179112 1.984042 TCGA-E9-A24A 69 0 NA 747 breast stage iia t1c n1 m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 1 white not hispanic or latino 142.49.0 NA NA 2 4 NA NA 1 4 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 0 10.2802503 1.2627338 7.4022975 10.8776857 -1.7374466 11.3452276 -0.1523237 10.2999497 11.6613560 9.6285215 9.7858178 7.6246895 7.8249880 8.7695493 7.6114741 9.7046526 10.5145241 10.0900886 8.2067258 1.2627338 10.8154150 8.7566014 12.7617820 11.6425304 9.8857128 10.4660939 4.5481468 10.9459599 -0.7372061 1.0701145 9.0151265 12.2501876 12.7559759 7.7015380 11.9760250 13.2245573 9.1453888 5.2285301 2.7863036 6.0701016 8.5981363 10.8283241 7.3422303 13.5161133 0.8476763 11.3750225 13.5369420 6.1453881 9.4982337 10.4528792 6.7586003 7.0797290 -0.7372061 14.1001166 9.7887560 2.8477164 7.3342080 NA 4.5665290 10.3748595 11.4636445 10.8700762 12.4712851 10.4673171 9.0884997 0.2627939 11.0530944 9.5947825 5.8249893 9.1583211 1.0701145 11.8714627 13.9451370 9.2328231 11.7952236 11.7869203 8.1771310 1.7221600 1.5846739 9.2485877 9.4703703 11.8430045 -0.7372061 7.0042126 6.8057774 10.1864447 11.3458928 5.3712696 7.0604074 4.6550656 11.1741379 11.9309661 0.2627939 14.0875058 6.0571621 7.8756142 12.6393461 12.4793402 13.3494627 8.0813279 9.9974556 11.0459488 10.9385640 11.4271815 5.2169437 8.1934835 12.2133929 10.6114740 -0.1523237 9.8760750 9.2500099 -0.7372061 3.0711277 9.8052942 10.5860822 10.8841110 8.9821348 14.6576774 9.9106540 10.4077227 9.5177745 2.8477164 15.7271321 8.3686544 12.4300072 11.7485752 9.6577445 9.4544221 8.4794917 10.7076262 -1.2661e-02 9.2825e-01 9.2825e-01 -2.9949e-03 -2.9949e-03 -6.4038e-04 6.0228e-03 -2.7181e-03 -1.0180e-02 1.0895e-02 1.0895e-02 -2.6874e-03 4.0771e-03 4.0771e-03 5.7447e-03 5.7447e-03 5.7447e-03 1.2290e-02 0.0000e+00 -2.1642e-03 8.8463e-04 6.1618e-03 1.3127e-02 1.3127e-02 1.3127e-02 1.9136e-02 1.9136e-02 1.9136e-02 1.4383e-02 1.2648e-02 -7.7896e-04 -8.6364e-03 -2.9949e-03 -6.4038e-04 -6.4038e-04 -1.1042e-03 -1.1042e-03 -2.7181e-03 -2.7181e-03 -1.0180e-02 5.0488e-01 -5.3201e-01 1.0895e-02 7.5465e-05 7.5465e-05 7.5465e-05 1.7038e-02 4.0771e-03 4.0771e-03 5.7447e-03 5.7447e-03 0.0000e+00 0.0000e+00 0.0000e+00 -2.1642e-03 8.8463e-04 6.1618e-03 -5.2773e-01 1.3127e-02 1.3127e-02 -1.0561e-03 1.9136e-02 1.9136e-02 1.4383e-02 2.6884e-03 -5.3120e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 9.2023252 13.2960398 4.0176369 9.1400301 2.5106835 9.7813991 -0.7372061 NA 7.3044052 8.0242970 NA 7.9821345 -0.1523237 10.4470014 9.1222806 -0.1523237 6.1875579 9.8930130 11.7397452 9.5653849 9.7128592 8.6774311 11.3183673 5.5846739 8.6529149 9.0884997 0.5846739 NA 9.8989174 3.5846739 12.4209611 11.9863002 8.4074042 10.6172707 10.3378908 8.9120022 4.9351721 2.5106835 1.2627338 2.2627338 8.1560477 7.7364513 10.5645278 1.4326922 7.5612436 5.0176324 10.4957663 7.1238327 9.7004980 NA 12.7863079 3.3071370 5.4226165 8.9826565 5.8839922 1.0701145 9.7505859 8.4611909 4.5295336 NA 13.4609607 1.2627338 9.6153411 NA 7.5248410 5.5388702 8.3568234 8.7735101 14.4764480 5.2627451 8.4673170 11.9760250 10.8011967 10.9016343 13.5161133 13.0365033 9.3272663 10.9415661 13.5042077 8.3971723 9.4703703 9.4029366 0.2627939 7.9649184 12.0103095 10.644289 6.620298 9.545255 8.854268 8.376488 9.976257 7.950996 7.650763 11.642530 6.323442 4.145392 6.920958 7.066522 11.093855 10.135805 8.585801 7.642124 13.032222 5.004214 10.870076 10.666557 11.974090 9.156806 10.696853 9.708278 NA 9.165777 8.604020 2.262734 11.345893 8.502345 10.368654 11.174138 7.713957 13.439237 10.529532 10.850289 13.167757 9.166628 10.377790 1.584674 TCGA-E9-A295 71 0 NA 22 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 147.48.0 NA NA 1 3 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.873276e-06 3.122126e-07 11.29080935 8.55161753 6.59370335 11.64006287 -0.05020363 9.77321390 0.53485845 9.73529911 11.34939160 7.51590086 9.64071762 7.26272912 8.68116566 9.34430923 5.88058513 8.56823204 10.14337199 9.56087140 7.23524838 6.00512822 9.84920350 9.89529050 13.87716162 11.42608650 8.23755894 10.61961751 5.90404327 9.92641075 NA -0.05020363 8.09959398 11.79886069 12.81963322 6.54976003 12.78836118 13.22057993 10.22829610 8.72133609 5.70473366 7.62227223 9.03730946 10.23640436 7.62580380 12.81509659 0.94987106 9.70723660 13.17746255 5.59370335 9.80595309 11.45392073 8.81093339 4.37610976 NA 13.82288260 11.23833493 3.34217070 9.78589690 2.27178421 5.21663335 9.39692989 10.00716144 9.36558844 9.85898960 9.51304279 9.97498611 3.75720464 10.77201908 10.37348781 5.69131361 7.62580380 0.53485845 10.84580051 14.05415870 7.78640229 11.05837109 10.77201908 8.30739847 1.53480866 5.56455499 8.58647128 8.68962729 10.46997417 NA 6.10971785 7.71139785 9.64681411 11.15502893 6.39278966 4.97221474 4.15929818 9.14951901 12.10703562 3.75720464 13.01012035 5.45764025 7.89529050 11.12477232 13.18511294 12.28118346 8.84920366 10.96282025 10.31069366 10.18944518 10.61651448 4.99424028 8.86572585 11.07040852 11.08138211 2.53480866 10.46997417 9.26272959 4.70473366 3.95030043 9.24331825 10.42101370 9.29746795 9.04656172 15.25731427 10.22713396 9.99492361 7.15930020 3.47341028 15.46736222 8.57555551 12.45329970 11.72071693 9.50922375 9.55532613 8.21428900 10.10921976 -0.3540400 0.6504300 0.6504300 -0.3539300 -0.0111580 -0.0027310 0.3444200 0.1702000 0.1702000 1.0070000 1.0070000 1.0074000 0.1019500 -0.2275700 0.7547600 1.5856000 0.5867300 0.3118200 0.3150300 -0.3489000 0.7166500 -0.3670000 -0.3902600 0.3012400 0.3012400 0.2102800 0.2102800 0.2102800 0.5396500 -0.3884700 -0.3540400 -0.0096410 -0.3539300 -0.0084226 0.0092104 0.3270900 0.3270900 0.1702000 0.1702000 -0.0108820 0.6772100 -0.0184510 1.0070000 -0.0151520 -0.0151520 -0.3559800 -0.0191380 0.1286400 0.1286400 -0.3827700 -0.7057400 0.3118200 0.3150300 0.3184000 -0.3680600 0.7166500 -0.3670000 -0.7717300 -0.3902600 0.3012400 -0.3514100 -0.4349300 0.2102800 0.5396500 -0.3531300 -0.0313200 0.102 0.102 0.000 -0.354 0.312 0.312 -0.349 0.717 -0.367 0.293 -0.361 -0.390 -0.089 -0.351 -0.351 0.210 0.210 -0.354 0.296 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.327 0.327 0.170 0.000 0.677 0.677 1.007 1.007 0.000 0.000 0.000 0.102 0.102 0.000 -0.354 0.312 0.312 -0.349 0.717 -0.367 0.293 -0.361 -0.390 -0.089 -0.351 -0.351 0.210 0.210 -0.354 0.296 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.327 0.327 0.170 0.000 0.677 0.677 1.007 1.007 0.000 0.000 0.000 8.87614272 12.77569980 7.73120633 10.18944518 3.44234640 11.54160268 -1.05020363 2.40928231 8.62227187 10.92497806 1.27178421 8.19302064 6.35923827 10.33840213 9.16780423 2.40928231 9.97844334 9.53762416 8.25818582 11.95512028 9.64875968 7.73120633 10.88058398 1.27178421 7.95266147 9.97498611 7.15930020 NA 10.94313888 1.75719397 12.68296788 11.99441150 8.63984461 10.03797229 7.79219683 10.16901514 4.23525221 1.75719397 -0.05020363 3.80782887 9.09577888 10.71637553 10.17746252 5.40927891 8.23344424 7.51970229 10.03132999 5.85673676 9.47927725 NA 11.19480498 1.27178421 5.07913060 9.62129915 5.97675771 0.94987106 9.47340866 9.41847059 8.40927806 9.24216827 13.93435408 1.27178421 10.63503343 -0.05020363 7.63984425 5.97221474 8.26045949 8.96804668 14.2356220 5.9156308 8.5025156 12.7883612 9.6008982 10.6160707 12.8150966 10.5149487 9.2804386 10.5135196 12.8544812 10.7878687 8.6896273 8.6098425 0.5348585 7.5645565 11.0733214 11.144911 7.760419 8.346451 9.845422 8.337864 10.022395 5.832490 7.727924 11.426087 5.015935 2.856747 5.994240 6.004153 10.614294 10.003773 9.278521 8.821752 10.314528 5.915631 9.365588 11.773214 11.138435 10.286911 10.546502 8.013242 9.148292 8.497088 7.969131 4.807829 11.155029 4.197771 11.140597 9.149519 6.711397 13.882338 9.754784 9.547899 12.235538 10.103399 9.053134 3.534809 TCGA-E9-A2JS 72 1 904 540 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 167.47.0 NA NA 1 3 NA NA 1 1 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.307136e-06 4.449823e-07 11.8560355 2.2707980 6.5875705 11.3839886 NA 9.4306760 1.2708279 9.8855144 11.1573722 8.4899732 10.0675395 7.4205515 8.9977525 9.8110710 5.9870116 8.5601647 9.5132983 9.3128548 7.2415266 2.7113848 10.4958398 9.9919039 13.1692981 11.5809305 9.1647561 10.4143700 4.8384879 9.9032702 NA 0.0483757 7.6433591 10.4044973 12.4958399 6.9672758 13.4144156 12.8028822 9.3245366 7.8297722 5.0484106 8.8374024 8.3808216 5.3214303 8.5009968 12.8005140 2.1638851 9.3190970 13.2938659 0.4634132 9.8007149 11.3643165 8.7751981 5.4858164 0.4634132 13.8692513 10.7372453 1.7853832 8.5442671 -0.5365868 2.3703317 9.5940204 10.6296128 9.4008235 9.3852906 9.0161188 9.4030289 0.4634132 10.9848048 10.3237607 6.3823128 6.2578649 3.8557705 9.7511621 14.1122005 8.4789067 10.9793959 11.5190711 7.5562071 -0.5365868 6.7534682 9.2675807 8.3597821 9.6112906 -0.5365868 5.8557680 7.6680205 10.0628977 10.2002744 5.3089396 5.0781615 4.6333731 9.9037998 12.0016386 6.8600540 13.1115825 5.7763330 7.8600546 11.5325637 13.7754108 12.1779099 8.1127059 10.3453284 10.2468572 9.8042011 10.9203174 4.8032994 9.6144662 11.5786560 11.3061929 NA 10.4930821 9.8094093 1.2708279 2.9913903 9.1586781 10.0117900 9.9366481 9.8546933 15.2493108 11.2312203 10.7865045 7.5078438 3.7113738 15.2884706 9.0389889 11.0760879 10.2287359 9.8027430 8.7418991 7.8600546 9.8129245 -0.4343300 0.4181400 0.4181400 0.2028900 -0.0056757 0.8241200 -0.5069100 0.0072217 -0.2895200 3.6569000 2.4263000 1.5727000 -0.0200010 -0.4264700 3.6569000 1.9131000 1.8520000 0.4049300 0.4049300 0.0030522 0.3989400 0.7562400 -0.4301800 0.7984000 1.6038000 -0.1196500 -0.1196500 0.6922300 0.4176400 -0.4221100 -0.4343300 -0.0264410 -0.4322500 0.4359800 -0.9149200 -0.4481400 0.4121200 0.0134920 -0.2895200 -0.2895200 0.0956530 0.0956530 -0.4498600 -0.3275100 0.0955850 -0.0063668 0.0203430 -0.4264700 -0.4056200 -0.4455500 -0.0132720 0.4049300 0.4215000 0.4025700 -0.0073339 -0.4318100 -0.0865180 -0.4182700 -0.4301800 0.7984000 -0.4114600 -0.1196500 0.6922300 -0.0469890 0.3850200 -0.4073800 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 0.309 -0.430 1.174 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 0.309 -0.430 1.174 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 8.0064815 13.3506227 7.7557715 9.7580704 3.5669491 9.5875711 1.9228829 -1.5365868 9.0521643 8.1145013 -0.5365868 7.0408782 4.4634524 10.9414609 9.0670761 7.3368939 5.7853779 9.4913557 9.0380432 12.1450176 9.5600265 7.5105735 10.1841214 2.1638851 8.2546125 9.4030289 3.1073029 NA 11.5530657 2.3703317 12.3414048 11.6608200 7.4549712 9.5308840 9.2708046 10.2299786 8.1000741 2.8557705 -0.5365868 1.7853832 8.5375912 9.3544740 9.6352520 3.5927321 9.5722813 7.4521341 10.2671773 6.3214303 10.1372005 NA 8.9401958 2.4634394 5.8121773 9.0876604 5.9524943 0.4634132 9.5248208 7.7534688 4.2708055 1.0484455 13.5743000 1.7853832 10.8762842 NA 9.4471560 4.1638932 8.0484122 9.0698549 15.171224 7.006482 9.202386 13.414416 9.816597 11.025454 12.800514 12.587167 10.627008 10.535917 12.042530 10.901982 8.359782 7.491356 1.270828 8.008414 11.167786 11.3504799 7.6308677 8.1673534 9.6245816 9.9608026 9.8623269 6.5349114 8.4000874 11.5809305 7.3582679 -0.5365868 5.7302351 8.4952886 10.2554265 9.9396895 8.0991858 9.6093819 9.9330915 4.3703387 9.4008235 9.7949266 11.7039429 8.9573052 10.6311814 9.1278971 1.2708279 9.6282623 6.5653733 3.3214375 10.2002744 7.3673317 10.8786633 9.9037998 7.7966049 13.1380834 10.1127059 10.1354330 12.3217222 9.9233936 9.8828833 0.0483757 TCGA-E9-A2JT 63 0 NA 23 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.343418e-08 2.781139e-08 11.0510818 8.7406645 6.8859648 11.5246277 0.5022287 11.1568959 -0.4977713 10.1068131 12.0886306 10.3414637 9.6081685 8.6970169 8.8576109 9.8026125 4.3096128 10.3718537 9.7346808 10.5343056 9.0140127 4.7117151 11.1715879 9.7934307 11.7244511 11.2483543 10.0031018 11.0011091 9.8674888 10.1533116 2.0872252 1.0871912 11.0848724 11.1586848 13.0141361 7.2504529 10.7830307 11.2225042 9.0472243 5.2571464 -0.4977713 6.6212006 9.4106525 7.7549256 6.8509881 10.9545012 NA 11.6504187 12.3001240 6.6212006 9.5810512 9.1693714 9.7608259 5.2571464 NA 15.4316573 12.9772333 4.0872252 9.9729188 NA 6.4447747 10.4083990 10.3555695 9.3602409 11.9928601 10.2546406 10.7013188 4.9285267 11.8261591 11.0105499 5.9779942 8.0530065 8.6746873 9.4809703 15.0643234 9.0880674 11.6117641 10.7812900 9.3602409 2.6721764 2.3096128 9.3398879 9.4937818 11.9691011 NA 3.0872252 7.2836199 11.3128315 11.1790985 7.0491548 9.1334369 4.7117151 10.6107844 12.0142596 1.5022797 13.3915737 3.8945753 7.4795402 11.0989156 10.4902345 13.1881037 6.4447747 9.6237934 10.5336165 10.6791374 11.9563021 5.5246279 8.3940438 11.7507805 9.8498812 0.5022287 10.3477499 9.3940435 3.2026998 4.5931147 11.0433565 10.8088912 10.2613158 9.5844090 14.7464379 10.4615375 10.4484352 8.2538040 3.5022542 13.8478731 8.2901626 13.2096190 12.4100895 9.9534710 9.4966133 8.5976571 10.2496892 -0.00567570 0.05039200 0.05039200 0.00069327 0.00069327 -0.00925910 -0.00097017 0.00444110 0.00444110 0.30729000 0.30729000 0.00044689 0.00402430 0.00402430 0.00305220 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00705760 -0.00304750 -0.00843850 -0.04983000 -0.04983000 -0.04983000 0.01363200 0.01363200 0.01363200 0.00583090 -0.01354000 -0.00567570 0.00000000 0.00069327 -0.00705760 -0.01240800 -0.00097017 -0.00097017 0.00444110 0.00444110 0.00444110 0.00055459 0.00055459 -0.05725000 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00402430 0.00402430 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00055444 -0.00705760 -0.00304750 0.00208050 -0.04102400 -0.04983000 -0.04983000 -0.04807200 0.01363200 0.01363200 0.00583090 -0.05864400 0.05850900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.5701984 10.9560450 3.8945753 9.8003225 9.5710381 10.6920844 9.7655291 NA 8.7165791 9.1425048 NA 7.8031618 4.5466537 9.7430512 9.7250548 0.5022287 11.2314557 8.5683491 9.4061419 9.4374250 9.3523529 8.3446102 11.4806129 3.3096128 6.1461155 10.7013188 3.0872252 NA 11.7731392 3.8945753 13.4971436 11.7824507 8.1852546 10.2335789 9.5120886 8.9719016 4.1461175 2.8241976 -0.4977713 3.4091465 8.6821691 9.4723657 9.4951983 6.5575418 7.6985915 6.1461155 10.0110451 4.7117151 8.8554067 -0.4977713 10.9227465 4.8598106 4.2026998 9.0539297 5.6683716 10.6951691 10.5078845 9.6029223 10.4038811 NA 13.8258073 3.2026998 10.5963376 NA 8.4241008 5.7690470 7.5356829 8.3910034 11.883240 5.928524 8.485253 10.783031 10.785348 10.089100 10.954501 10.720823 9.335150 11.258816 13.217364 9.706831 9.493782 7.263811 2.672176 7.524628 11.616328 11.022879 4.546654 9.311224 9.301541 8.156896 10.442698 11.250872 9.626381 11.248354 5.692084 3.672188 5.056848 8.228376 10.056849 12.291997 7.740665 8.584409 11.530857 11.048672 9.360241 10.794006 10.685275 11.376473 11.037535 9.111439 7.195747 10.457830 8.470754 11.796306 11.179099 4.456458 11.271271 10.610784 8.595017 14.426052 10.037535 10.786506 12.389481 11.397078 10.177335 5.384903 TCGA-E9-A3HO 49 0 NA 793 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 202.42.0 NA NA 3 2 NA NA 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.307136e-06 2.224912e-07 10.9258519 3.7026243 8.4915838 11.6700874 -0.2515388 10.9007172 NA 8.7470228 11.3739129 7.8981793 8.9987309 7.5970551 7.1015797 9.0692330 7.0198954 8.8918156 10.3460195 10.1583536 6.7199760 4.3030209 11.9002418 10.2073516 7.3483449 11.7508958 9.3940907 10.0052307 7.4102105 10.3450881 -1.2515388 3.1407459 6.9530033 11.2019603 12.5088405 7.3144863 12.9083037 13.0061149 9.2322482 8.2562271 4.3631430 5.1407500 8.0081759 7.5590038 6.0338348 12.8169588 2.2078616 9.9351656 14.5041285 1.7484183 10.5003069 10.2307362 5.9675998 5.8777148 1.7484183 13.7429034 9.4991393 2.9963526 7.8905397 -0.2515388 4.0703636 8.7887222 9.5844826 8.7342744 9.6508075 10.2201075 9.6568251 2.3333951 10.4265924 10.9302058 8.0635817 7.8464645 13.6926869 11.8965911 13.9410720 7.9313232 10.8262495 9.9880309 8.5590042 3.2719933 NA 8.2180740 8.4349330 10.2119568 -1.2515388 4.3333951 7.3106746 11.1623247 10.0737378 8.7955562 5.5033201 4.2402838 9.1641741 12.0852179 4.4208596 13.3041599 8.5248653 8.4419192 10.4070901 10.2670856 12.1046092 5.7928267 10.4767781 11.1407498 10.8401983 11.1076329 3.1407459 10.0871687 11.2117013 7.5133036 6.9868375 10.1929297 8.7666326 0.7484612 5.5825861 9.5773622 11.2875912 10.2032457 8.1493117 14.9172416 10.3001407 9.5338849 9.2492742 2.8359039 14.4704394 7.6187973 11.3101976 10.3163885 10.3272768 9.7413707 7.7652403 10.2670462 -0.38917000 0.19390000 0.93142000 0.03411300 0.01852300 -0.81958000 0.77248000 0.62606000 0.33060000 0.02244400 0.02244400 0.03538300 0.00069327 0.01810300 -0.37673000 0.01000600 -0.39408000 -0.00387790 -0.00387790 0.48475000 -0.81143000 -0.41926000 0.02763800 0.02763800 0.02763800 -0.02903800 -0.02903800 -0.03694600 0.04599100 -0.38302000 -0.38917000 -0.31246000 0.01852300 -0.18999000 -0.81958000 0.01642500 0.01642500 0.62606000 0.33060000 0.01307400 0.36608000 -0.42375000 0.02244400 0.12255000 0.12255000 0.12255000 0.01740400 -0.36488000 -0.86650000 -0.38078000 -0.82252000 -0.00387790 0.00736090 0.00805670 -0.81565000 -0.81143000 -0.38190000 -0.81565000 -0.82130000 0.02763800 0.37101000 -0.02903800 -0.82187000 -0.40196000 -0.04007300 -0.21639000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 0.000 1.752 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 0.000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 0.000 1.752 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 0.000 8.8517203 12.0520705 3.5557916 9.7069851 4.1551016 11.1773159 2.6553289 NA 9.0993715 7.6997168 NA 6.5963672 3.3922899 9.7989613 9.8464645 7.8037146 7.8279174 9.1267272 8.5083205 10.7904337 9.4680864 7.7596599 11.4894780 0.2944296 10.3976885 9.6568251 5.1746980 NA 10.5219837 3.1407459 12.9665415 12.2469077 8.7371172 10.3589958 9.8809320 10.1604729 7.0882826 3.5557916 2.6553289 11.2527548 8.7084342 11.0315207 9.2078641 3.9183576 4.4438718 8.7142167 9.4600993 7.1493122 9.4039632 NA 11.9439584 3.3333951 6.5686113 9.5191540 8.3611718 2.5557916 9.1525095 7.2362726 6.2641329 0.3334237 14.2372454 -0.2515388 10.1386014 NA 6.6553232 6.7142167 7.3106746 7.2442877 9.909810 7.773572 7.781855 12.908304 10.480600 11.005820 12.816959 12.198999 8.607967 9.747023 11.592550 10.313534 8.434933 8.586060 2.996353 8.101579 10.519509 11.051357 6.631075 8.333395 9.573391 9.623414 11.179481 7.074862 6.529793 11.750896 10.899449 4.105988 5.174698 9.528677 9.953004 9.792827 8.012875 10.238782 8.967601 5.333395 8.734274 10.053924 10.589210 9.437557 11.081588 7.337147 NA 8.926076 7.906461 5.462677 10.073738 7.392288 11.096607 9.164174 7.523219 13.926864 10.293880 9.760359 12.011848 11.687093 10.419973 1.333366 TCGA-E9-A3Q9 78 0 NA 560 breast stage iiic t3 n3 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 22 white not hispanic or latino 216.36.0 NA NA 2 2 NA NA 1 4 3 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.648227e-07 1.520095e-07 11.6595409 8.4981324 8.1446689 11.2850679 0.2298340 11.3646396 2.2297725 9.6420024 11.4355787 7.5931902 10.1200498 8.4359861 8.7983749 9.0689894 7.0668878 8.6987488 9.9880088 10.1098792 7.9069176 0.9667258 11.1349217 9.5251717 12.7749109 10.0888025 9.6926286 10.8103582 5.6335068 10.4953850 NA 2.4521737 8.9880086 12.5714896 13.3039270 8.4729597 11.7453211 11.8664101 9.7428551 7.8395798 4.4521803 6.3030336 8.2958745 8.9857859 5.5517129 13.1894253 3.1683853 11.6900708 13.5507270 NA 10.1387585 9.9388693 10.3088258 5.3862902 NA 15.2865123 9.9700272 1.8147555 7.4934456 NA 5.0710890 9.7369194 10.5899010 10.4034627 11.0457025 9.8567112 9.8784427 1.9667627 11.3663495 10.0695142 6.2668746 8.1605229 6.2447368 11.3597124 14.2494341 7.0261494 11.5539661 10.9602556 7.6335075 -1.3551285 2.3452544 7.3795326 8.4950099 11.1182751 -1.3551285 2.2297725 7.1326632 10.3021415 11.3769904 6.7162858 6.6727294 3.7741018 10.9197835 11.9283455 3.3997043 13.4683893 6.2447368 7.9734982 11.7297975 11.2479857 12.7627907 8.3452629 10.3025881 10.6623274 11.0108720 11.2898059 4.6221045 8.4343568 12.0862110 10.8109861 NA 10.3048189 8.9520239 -0.3551285 3.3491388 9.6127697 10.0944876 10.4042952 8.7402199 15.0512107 10.3030344 9.4713714 9.5873374 0.9667258 16.0907916 5.2741796 12.8500817 12.0496985 9.3556295 9.5726009 7.8247322 10.4320032 -0.00512270 0.61863000 -0.00221680 0.00597000 0.00597000 0.00471900 0.00000000 -0.00182370 0.00375030 -0.00097017 -0.00097017 -0.00097017 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.03667400 -0.00193990 0.00055459 -0.00917860 -0.01702400 -0.01702400 -0.01587900 -0.01587900 0.00055459 -0.00512270 -0.00512270 -0.00512270 0.00485790 0.00597000 0.00471900 0.00471900 0.00000000 0.00000000 -0.00182370 0.00624810 0.00750000 0.00055459 0.00055459 -0.00725640 0.00597000 0.00217970 0.00217970 0.00069327 -0.00277070 -0.00277070 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.00304750 -0.03667400 -0.00193990 -0.00815180 -0.00346270 -0.00917860 -0.01702400 -0.00152430 -0.01587900 -0.01587900 -0.00512270 -0.05590300 -0.01642900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0176881 11.3769904 2.9667442 10.0489001 2.9522590 10.7146084 1.8147555 -0.3551285 8.7996410 7.2922811 NA 8.0626754 5.4777129 9.7382406 9.5873374 0.6447792 8.2428754 8.9802133 11.5062977 10.6213872 9.7903985 7.6837421 11.4616067 5.2297840 10.5097829 9.8784427 3.8927504 NA 10.7166205 3.0371362 13.2170495 12.4094873 7.4713712 10.9816085 9.0176881 9.0520909 6.6048245 1.2297725 0.2298340 2.9667442 8.8321751 11.2638967 10.9224010 6.2814479 8.7921044 6.3862902 10.3132648 8.1624925 9.5866043 NA 12.7411264 0.9667258 9.1762046 9.4659035 5.4471461 6.0794506 9.6837421 9.1878548 8.6462311 NA 13.8980427 0.6447792 10.7243078 NA 8.8160000 6.1366754 7.4392391 9.4824510 12.5083066 3.8927504 8.8951214 11.7453211 10.5972002 10.2222519 13.1894253 11.1098792 9.2703949 10.3951112 12.8073717 10.1781528 8.4950099 8.3487264 -0.3551285 7.7843744 11.0408926 10.480479 7.100150 8.491880 8.629241 7.697391 9.883670 8.043567 7.104255 10.088803 7.834647 7.195570 9.693991 5.756271 8.350455 9.575560 8.060565 8.997970 12.208853 6.539641 10.403463 10.979376 8.823488 9.560702 10.417138 8.745485 NA 9.514802 8.082908 7.002375 11.376990 2.814755 11.082947 10.919783 6.948603 14.176570 10.258152 10.445723 12.644559 9.691947 9.380379 2.229772 TCGA-E9-A3QA 33 0 NA 19 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2011 NA NA medullary carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 4 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1.279324e-06 3.893595e-07 13.1836242 5.6312091 5.1638167 11.8812837 0.9032697 9.4216136 NA 8.7192053 10.5897889 10.5537418 9.0428397 7.9513209 8.8843800 10.0360023 8.0782138 9.0707065 8.7020303 10.5582227 8.4031343 7.8919732 10.4004748 13.1196806 13.1888351 10.3155053 9.2505405 10.3479581 8.5650663 9.6659472 0.6402507 0.9032697 8.3736082 11.1274911 12.4348038 6.3462318 11.6286546 10.5935774 10.5244245 8.0681952 4.4476056 9.7419671 8.5990964 8.4242343 6.7106439 4.6581772 -1.6817699 12.0062483 10.7519113 8.1288976 10.1005420 10.2765161 8.4920030 5.7361773 0.6402507 16.0254932 13.7753315 2.3183168 10.1508204 -1.6817699 6.1127418 9.4183310 9.9200966 8.6933653 9.9823287 9.5996763 10.2516477 3.6758724 10.4511469 10.9803265 3.9330344 7.4476089 4.6037272 8.4920030 15.4850872 8.3137678 10.2779656 8.7991161 11.3431192 2.1256842 0.9032697 9.0118129 8.6025716 9.7664421 NA 2.9032890 8.2386789 9.9014086 10.1172026 5.6037272 7.8141806 5.8261213 8.4044621 11.5577752 3.4476056 13.0260085 3.7445917 5.7612693 10.6123721 12.0654699 11.9141661 8.3112642 10.5093851 10.1982919 9.8594225 10.7285122 4.2490660 8.0748822 11.6883321 7.4604330 3.9907552 10.8480004 9.5302142 2.7777669 4.0380586 9.1933073 12.1105061 9.2659628 9.5827684 14.6942477 11.5420259 9.7757067 4.9765378 2.0187766 12.2694284 4.9330344 12.2431384 12.0195240 8.9801039 8.9079770 6.9729614 10.4655975 0.113070 0.603220 0.316750 0.095363 -0.037399 -0.030404 0.087969 -0.221080 0.134650 -0.032996 0.164300 0.628250 0.158310 -0.113780 0.165650 0.247310 -0.214530 0.356590 0.054388 -0.217870 -0.205480 0.359530 -0.167260 -0.167260 -0.167260 0.156510 0.402110 -0.103030 0.070243 0.129330 0.113070 -0.316220 -0.037399 -0.030404 -0.211260 0.083776 -0.219730 -0.233580 0.134650 0.055943 0.052451 0.101760 -0.207060 0.059937 -0.224780 0.087916 -0.211560 -0.113780 -0.154710 -0.200500 -0.214530 -0.247030 -0.215520 -0.224780 -0.342470 -0.205480 -0.195870 0.089851 -0.167260 -0.167260 -0.187100 -0.209210 -0.103030 0.046559 -0.181690 0.099579 0.158 0.158 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 0.157 0.157 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 0.158 0.158 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 0.157 0.157 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 9.7597140 12.8712951 -1.6817699 9.8516555 5.1638167 12.0642102 6.6357384 2.7777669 9.3729301 7.8418876 3.1763068 7.4242343 2.4058018 10.6703693 9.6775264 4.4680750 8.3695350 9.7767324 7.8081739 10.5035110 9.2939015 6.6977043 10.7076883 3.5277835 8.0597927 10.2516477 3.3627224 -1.6817699 11.0600035 2.0187766 12.2522009 12.6599142 7.0496449 9.3034563 11.0970190 10.3179736 6.5423277 4.8101809 NA 0.9032697 8.0065763 10.5013408 5.5567298 2.3183168 9.4189489 7.4680733 10.6700933 3.4476056 10.2017328 7.1480484 12.3800346 4.4476056 3.9907552 9.8288626 8.0926847 8.0428397 10.1172026 8.9070406 9.9084450 6.6846476 13.7776294 1.1256511 11.8125564 NA 10.1033695 3.4476056 8.0898154 8.8786588 12.697680 9.432068 8.358616 11.628655 9.363403 10.876747 4.658177 11.407611 8.185604 10.693908 13.643385 12.015185 8.602572 7.933036 5.761269 7.549547 10.874832 10.5308222 3.9032890 9.3627199 8.8690725 8.2131436 9.5452919 9.0581065 7.6581758 10.3155053 11.0986606 -1.6817699 8.2401669 10.0463271 11.2781467 11.1848321 7.5662535 9.0152935 9.1313052 8.7009498 8.6933653 10.3140930 11.6560871 10.9298118 10.1598903 7.9330355 0.6402507 9.8760001 6.8706495 9.2984654 10.1172026 4.6581772 11.2703390 8.4044621 7.8942624 13.8472072 10.8099285 10.0183321 12.6189644 10.9713948 8.7550374 2.9032890 TCGA-E9-A3X8 48 0 NA 478 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA NA infiltrating lobular carcinoma yes 4 white not hispanic or latino 234.26.0 NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.39057e-07 10.79018760 6.10676916 4.84985919 11.54157553 NA 9.07443559 NA 8.03868090 10.18275151 12.97249218 8.90090906 6.12709052 7.71876232 9.54275776 8.69853764 7.58560406 8.80799659 9.21633190 7.20083781 2.28915574 11.26327437 11.62140699 8.85443925 10.79018760 8.37448615 9.36168130 8.10164482 9.05069786 NA 1.77458678 7.51411279 10.42305948 12.05103026 6.25262002 12.44775631 11.80622544 12.02943335 7.45505839 2.28915574 7.75838114 7.80956879 8.98541874 7.84066276 11.49591682 0.55218030 13.09706500 13.29652436 6.69513919 10.82247244 9.05997576 8.62543014 4.61107203 -0.03283139 14.89394376 10.53184441 1.96720550 9.65109045 NA 4.66765941 8.12709000 8.68146402 8.62721430 10.48291835 8.31594656 10.53136801 -0.03283139 9.43584254 10.31317816 7.27099886 7.04403449 0.96724240 11.40158615 13.73302260 3.09320521 9.28801912 9.13589061 7.12203695 5.21514661 5.66765941 7.99235831 6.25262002 9.78899249 -1.03268381 5.73540303 6.89795554 8.96157211 10.48488793 3.96721473 5.19603649 3.49077548 8.23634528 11.62966439 1.77458678 13.63887016 6.52946023 6.17667183 12.93173991 13.73307439 11.37342353 8.87861040 10.17117830 10.21158233 10.08810435 9.03196140 -1.03268381 9.80010863 10.55874088 9.44092438 -0.03283139 9.62185463 7.80642202 0.55218030 2.77456570 7.59657517 10.32751694 9.05468137 8.17178978 15.49789919 9.71121147 8.30037407 7.55218107 3.35953523 14.26549594 9.25608459 12.40262836 12.83420763 9.16934230 9.60112189 6.14712757 9.35094448 -0.18043000 0.56170000 0.56170000 0.00819590 0.00819590 -0.18244000 0.00791750 -0.18692000 -0.18207000 0.19527000 0.19527000 0.19527000 -0.00041585 -0.00041585 0.00299600 0.00299600 0.01000600 -0.17680000 -0.17680000 0.00597000 0.00000000 -0.18131000 -0.17866000 -0.17866000 -0.17866000 0.00194180 0.54471000 0.54471000 0.00513590 -0.18043000 -0.18043000 -0.16929000 0.00819590 -0.18244000 -0.18244000 0.00791750 0.00791750 -0.18692000 -0.18207000 -0.19089000 0.19664000 0.19664000 0.19527000 0.00277190 0.00277190 0.00277190 0.00903120 -0.00041585 -0.00041585 0.01628600 0.01000600 -0.17680000 -0.17680000 -0.17563000 0.00597000 0.00000000 -0.18131000 -0.37459000 -0.17866000 -0.17866000 0.00772980 0.00194180 0.54471000 0.00513590 0.19619000 -0.37381000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 9.8582428 12.9941742 5.0333085 9.8368124 3.8741084 9.8567224 3.6110779 NA 9.8673306 9.0757431 NA 6.9784462 3.9672147 9.8329519 9.7112115 4.0116119 9.1778899 7.8741090 10.7370564 12.1554983 8.6934368 6.2433435 10.2474093 1.5521803 8.8590023 10.5313680 5.4750135 NA 10.0965016 2.1371428 14.3146323 12.4715410 7.8920309 8.9714389 8.7567521 11.3813752 3.4907755 1.2891262 0.5521803 2.5521803 9.7212710 12.4061403 9.1912201 3.9214173 7.8362568 9.9686268 9.9861141 5.2709998 9.4215179 0.5521803 11.6750090 1.5521803 4.5521803 9.7232577 7.4710444 6.0225010 9.2398484 9.2008383 10.7099490 0.9672424 14.5351449 1.9672055 11.1558074 NA 8.4368602 5.1169677 7.7648802 9.4700504 13.437068 6.646698 8.025210 12.447756 10.370763 11.429721 11.495917 10.027914 8.872606 9.249149 12.727107 10.289147 6.252620 10.140896 1.774587 7.215146 8.990973 10.01297826 3.61107793 8.45103427 8.17178978 7.04936721 9.12933300 7.51411279 8.32256950 10.79018760 9.02250098 2.96722395 7.76488021 6.76798842 8.27555745 10.47550850 7.14906625 11.34795017 4.09649801 7.09650117 8.62721430 10.73416148 9.37872944 10.28010145 10.04736989 5.74857931 NA 9.86457246 6.66765799 8.15209365 10.48488793 6.94449890 10.59018543 8.23634528 7.50249371 15.07941366 10.35038276 9.72210599 11.63654655 11.16719752 8.74035791 -0.03283139 TCGA-E9-A54X 85 0 NA 375 breast stage ia t1b n0 (i-) m0 2-10-2014 female 2012 NA NA mucinous carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA 2 2 NA NA 1 4 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.946798e-07 11.14949234 NA 8.40144744 10.96291610 NA 9.90132837 -1.01013438 9.47576565 11.18623107 8.21393775 9.47878074 7.43701962 8.21634864 9.42247817 7.22834060 8.41620091 10.63514437 10.09649920 6.47375282 NA 11.65171443 8.38654111 13.89410050 12.34693842 9.65171439 10.70074279 -0.01013438 10.53586604 NA 6.49773051 2.98993826 11.83523032 13.03116767 8.07739897 12.15122570 12.02267085 10.36877304 7.14475408 4.48178975 5.21875405 9.66324534 9.57865101 4.11922336 13.68342327 3.63379155 7.61198824 14.23819747 3.98993826 9.17465060 10.77538880 5.89682644 7.43701962 -1.01013438 13.44873060 7.37795403 0.57492498 7.04521906 NA -0.01013438 9.03159535 10.48978225 9.44320693 10.92325817 9.63198805 9.36823121 -0.01013438 11.12243602 9.77538872 7.07208543 6.86030112 14.00826691 11.88134033 14.40630504 6.04900991 9.64278134 10.79890050 7.24260155 1.79730356 3.63379155 7.55217877 7.78435217 10.68472951 NA 2.57490077 7.52909551 9.32309170 12.63919250 6.90282609 3.15985519 2.98993826 10.11405762 11.81390057 0.98993826 13.65288279 7.58612596 7.94993815 11.63559475 11.26547886 12.48329145 8.39507780 11.17170973 10.64009053 10.17859315 10.19022186 3.38225223 9.47878074 12.51936688 9.87791844 NA 10.07408030 8.97150361 0.57492498 5.32960800 9.72040639 9.67380815 10.06675198 9.21995670 14.80068366 10.07408030 9.71274382 8.58798898 -1.01013438 15.97685605 8.05333131 12.10806629 10.44011659 9.93757333 9.48379180 7.44526321 9.93919395 0.0091705 0.0091705 0.0091705 0.0058309 -0.0141290 -0.0302060 0.6525900 -0.0153290 -0.0153290 0.7837500 0.7837500 0.8018400 0.0000000 0.0000000 -0.0044312 -0.0044312 -0.0044312 0.0284810 -0.0189560 -0.0213730 -0.0059701 0.8508700 -0.8360700 0.0225850 0.0225850 0.0758470 0.0758470 0.0758470 0.0140510 0.0091705 0.0091705 -0.0056757 -0.0141290 -0.0036011 -0.0302060 0.6525900 0.6525900 -0.0153290 -0.0153290 -0.0153290 0.8042200 0.8042200 0.8098600 -0.8680600 -0.8375200 -0.0058140 0.1061400 0.0000000 0.0000000 -0.0044312 -0.0044312 0.0039595 -0.0189560 0.0034687 -0.0213730 -0.0059701 0.8411200 0.0894600 -0.8360700 0.0225850 -0.0074720 0.0758470 0.0758470 0.0140510 0.0059700 0.0303100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 5.87258008 8.84324586 6.82282573 7.65171475 1.47793632 10.11405762 -0.01013438 NA 9.56830901 5.31186273 2.15985519 3.15985519 -0.01013438 10.34032303 9.42038892 1.98993826 3.74482846 9.29827546 12.37795360 10.59402614 9.87004779 6.73140321 8.90581569 -0.01013438 9.58984923 9.36823121 3.38225223 NA 10.43546858 0.57492498 12.77334385 13.06958775 6.15986125 10.40567812 6.07739897 9.39614129 -0.01013438 -0.01013438 0.57492498 10.63108491 8.81011530 10.23548906 9.81330358 NA 9.24457529 7.57489850 9.64098797 4.03433018 9.36388900 -1.01013438 9.90282564 -1.01013438 8.97720034 10.40942255 7.38358421 NA 9.10887751 4.77129402 7.78435217 -1.01013438 13.80251476 -0.01013438 11.11146983 0.57492498 9.35188005 1.79730356 8.24023465 8.78921801 14.710057 5.449367 9.477776 12.151226 10.041050 10.150438 13.683423 12.785672 8.343083 9.716154 12.172641 9.540683 7.784352 8.228341 2.896834 7.006745 11.638294 10.512518 5.967217 9.222357 8.593563 7.955721 10.130415 4.159863 9.869520 12.346938 7.893818 NA 9.714450 7.914808 10.444236 9.077399 8.540683 10.510064 9.749825 0.574925 9.443207 10.331455 11.091584 9.262566 9.773753 8.139683 NA 9.036897 7.360929 -1.010134 12.639192 4.944132 10.862996 10.114058 6.655272 14.148112 10.216349 10.271866 12.341428 10.811710 9.006745 NA TCGA-E9-A54Y 63 0 NA 7 breast stage iiia t2 n2 m0 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 8 white not hispanic or latino 271.28.0 NA NA 5 3 NA NA NA NA 3 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 3.059253e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.6581100 1.4280000 2.3566000 0.6016000 0.1136000 -0.2204700 0.2188300 0.9227000 -0.4119000 1.7150000 3.4014000 3.1980000 -0.2420400 -0.2420400 0.0228650 0.0090750 0.0334080 -0.0320410 0.4420600 -0.8281400 0.1165300 -0.0510460 0.5890100 0.5890100 1.3362000 0.0000000 0.0000000 0.0000000 0.3966200 -0.4449600 -0.4187100 -0.3634000 0.1388000 -0.2204700 -0.2115600 0.0437230 0.0554150 0.9227000 -0.4119000 -0.4119000 -0.3018100 -0.3096800 -0.8494700 0.0479780 0.0246890 0.0246890 0.0072217 -0.2420400 -0.2420400 0.0228650 0.0266400 -0.0320410 0.4420600 0.3315700 -0.3466400 0.0827610 -0.0510460 -0.8284700 -0.8270000 1.3362000 -0.3554400 0.0000000 0.0000000 0.3966200 0.0790150 -0.3696300 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 0.483 -0.334 0.509 1.336 -0.355 -0.355 0.000 0.000 -0.367 1.061 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 0.483 -0.334 0.509 1.336 -0.355 -0.355 0.000 0.000 -0.367 1.061 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-E9-A5FK 60 0 NA 447 breast stage iiic t2 n3 m0 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 10 white not hispanic or latino 288.26.0 NA NA 2 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2.503025e-07 8.343418e-08 11.10101167 7.66418130 5.87907837 11.77086307 1.65667941 9.47153642 -0.92823733 8.04039110 10.65198304 9.87343273 8.93591052 7.28117801 8.25163342 9.65104039 6.44676406 9.00541515 8.84980165 9.45758691 7.48111565 5.97861437 10.71963250 10.55150467 10.41435470 11.21095602 9.18676820 9.99802043 10.04613905 9.24665012 1.65667941 1.07169403 8.42266359 11.13511952 12.49286884 6.42045208 12.82504567 12.36476493 9.93281135 8.54339960 4.79964686 7.34318749 8.02882660 8.11611831 7.12157289 12.38843022 1.65667941 11.92756625 13.47872659 4.68643329 10.83044319 10.20743376 7.92034750 7.18546618 -0.92823733 17.08047868 13.69516416 1.07169403 8.22654273 NA 5.41157539 8.85799405 9.23159585 9.14854014 10.16448160 8.51051615 10.23788752 4.31965406 9.88229609 10.43531168 6.71558042 7.39815367 5.44676241 10.98946944 14.31887315 5.10492788 9.65574733 9.21638259 8.79794258 2.24165717 3.24164191 7.48957665 7.51051654 10.54390752 NA 4.20100647 7.06040953 9.58149945 9.89986095 6.77216411 6.42045208 3.65669085 9.09686403 11.85226420 2.97861666 13.48944512 5.82661204 7.11064303 11.24508928 11.40152077 11.63372831 8.15653263 10.27201000 10.23600283 9.78080827 9.86370124 1.87907837 9.59724530 11.28422082 10.22527650 NA 10.36519604 8.59136077 1.07169403 0.07176267 8.48535236 11.00172253 9.28239579 8.54543019 15.36084276 9.94131821 8.94516844 6.94208867 4.95436849 14.86220022 10.40487982 12.84424521 12.81603272 9.70834901 9.57057355 6.93591111 10.00909827 -0.172080 0.400610 0.400610 -0.057250 -0.057250 -0.181130 0.076566 0.074408 0.074408 0.323980 0.323980 0.323980 -0.150160 -0.100790 0.060548 0.060548 0.060548 0.046559 0.046559 0.000000 0.101180 -0.053611 -0.047292 -0.047292 -0.047292 0.180410 0.180410 0.180410 0.121340 -0.068903 -0.172080 -0.050776 -0.057250 -0.181130 -0.080275 0.076066 0.076066 0.074408 0.074408 0.074408 0.072827 0.072827 0.323980 -0.075787 -0.075787 -0.075787 -0.070135 -0.100790 -0.100790 0.066086 0.060548 0.046559 0.046559 -0.080960 0.000000 0.019622 -0.053611 -0.082909 -0.047292 -0.047292 -0.067056 -0.221820 0.180410 0.121340 -0.015741 -0.170440 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 10.9386170 12.4083705 6.2811771 9.8982729 5.9297058 10.4494772 6.4726031 1.6566794 9.6118525 8.2664811 0.6567252 7.6529253 5.0940925 9.8887081 9.5635774 3.3936496 8.7599747 8.6011550 11.0087304 12.0607641 9.2409730 6.9109281 11.1585241 2.8790784 9.9635081 10.2378875 6.3663449 NA 11.1753401 3.2416419 14.0248296 12.6373026 8.6585643 9.3478488 10.5650796 10.3314678 2.5311444 1.3936359 NA 3.0717284 10.1841640 11.3530750 9.8399087 6.1697567 7.9753654 8.3891370 10.2664813 4.4292745 9.2664813 NA 10.8990671 2.5311444 4.2010065 9.8129976 6.0682258 7.2315956 10.4478498 8.9030316 10.2963291 -0.9282373 14.4174415 1.8790784 11.0331742 NA 8.4424119 6.0024618 7.5188073 9.1565329 11.7563766 5.9665412 7.7263605 12.8250457 10.2945193 10.9991321 12.3884302 10.7321661 8.7281494 9.8653278 12.8004953 10.0752423 7.5105165 8.7564729 0.6567252 7.0200921 9.7236731 10.7463581 5.4115754 8.0083625 7.9995023 6.0259213 9.4624738 9.4071148 8.1538737 11.2109560 7.6224714 -0.9282373 5.3385100 6.8888358 9.2048667 11.0958252 8.3053440 10.3605906 4.3196541 8.5208732 9.1485401 11.1445270 10.2811778 9.9054052 10.0331741 6.4026420 NA 10.2268715 7.1270069 8.8855057 9.8998609 4.8790784 10.9297054 9.0968640 7.3755052 14.3471215 10.6969767 10.6901099 12.1537071 10.6016429 8.8448636 3.2416419 TCGA-E9-A5FL 65 0 NA 8 breast stage iib t3 n0 m0 2-10-2014 female 2012 NA NA other specify yes 0 white not hispanic or latino 288.26.0 NA NA 4 NA NA NA 2 5 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.807741e-06 4.449823e-07 11.6139584 5.9695074 5.8614468 11.3614707 NA 8.1410838 NA 8.0455516 9.7990013 12.0161533 9.6079993 7.4302903 7.2824843 9.6187080 7.2644126 8.9280152 7.5741659 10.5091458 9.1623848 7.0906936 10.9337441 9.6020155 13.4869941 9.1509544 9.3003320 10.2221240 4.7958604 9.9000009 6.1509536 NA 8.0098393 11.3443676 12.7062405 8.5345013 11.8300504 10.6097896 9.8970716 8.4194432 2.3696061 8.3554366 8.5911816 8.8187432 8.2056447 10.0587190 0.9545686 11.8860333 11.3766218 6.0420205 10.5869464 11.0859853 9.7435471 6.7094450 2.3696061 13.7014513 8.3265225 4.4988763 6.7094450 NA 5.0700329 7.0769534 9.7468050 9.0752270 9.1144285 8.1993170 10.1410840 4.0134533 8.9639191 10.1236469 6.6269822 8.0804008 1.3696061 5.9989514 13.9721774 5.3557775 9.2507084 10.3575690 9.6653635 5.6175218 1.3696061 7.9545569 8.9806194 12.6538403 4.2764818 2.8290174 8.5643515 9.2135157 10.8818412 9.0260193 4.4988763 4.4570558 9.9164890 11.3143066 2.5395311 12.8695649 1.3696061 6.9009755 10.8956047 14.3834842 12.7220518 7.8534100 9.5269415 9.5129778 8.3891852 10.3121090 1.1393385 9.9498531 11.2376454 9.0025897 NA 10.4590450 9.2598588 NA 3.7619129 8.5142529 11.4878867 10.2384170 9.1294827 16.0869764 9.8980487 9.1865781 7.7315383 2.9545500 10.5513680 5.6733755 13.4307125 12.1682688 8.4139888 9.9573720 6.3695939 8.7811056 0.071248 0.071248 0.071248 -0.091170 0.500970 -0.265400 0.462120 -0.076012 -0.076012 -0.093667 -0.093667 0.854420 -0.014916 -0.014916 0.202440 0.202440 0.202440 0.011818 0.095653 0.684210 0.107600 0.077286 0.219670 0.233800 0.472720 0.106870 0.106870 0.106870 0.132580 0.071248 0.071248 -0.266850 -0.047531 -0.278300 -0.265400 0.448670 -0.274280 -0.076012 -0.076012 0.537490 -0.274040 -0.055499 0.292940 -0.210690 0.000000 0.000000 0.000000 -0.014916 -0.014916 0.202440 -0.281200 0.011818 0.095653 0.095653 0.444770 0.107600 -0.227410 0.234390 -0.278340 -0.286200 -0.463230 0.106870 0.106870 0.132580 -0.123300 -0.282630 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.438 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.438 7.9318367 13.0375931 5.9989514 10.0071251 NA 10.3940416 2.9545500 6.3468736 9.1801663 8.9583091 3.6175218 8.0529750 6.0134511 11.5640436 9.6222600 4.3237880 8.1211387 9.8644500 7.2704617 11.1144284 9.0813476 6.0420205 11.0030439 0.3696061 6.4781192 10.1410840 3.8290275 NA 11.5701867 2.8290174 13.0404720 13.3650967 7.5935965 8.8654497 9.9193793 11.4794252 4.5790474 1.3696061 0.3696061 7.1311460 9.1945532 11.5304114 7.6824778 6.5495044 8.0585790 9.8412698 9.6198929 4.7271472 10.0829810 NA 10.7656641 2.5395311 4.7958604 9.5288731 6.5659261 0.3696061 8.3062326 7.7094444 2.1769610 7.6733755 14.3058644 0.9545686 11.3113758 NA 10.5881578 4.4570558 6.8290263 7.8931565 10.937940 8.753299 7.824922 11.830050 11.293293 10.989356 10.058719 10.826462 8.748973 9.824922 12.650510 10.711113 8.980619 8.774736 2.369606 8.094108 8.822865 11.3292343 3.0700286 9.0098395 8.9787734 7.2461116 9.0678476 8.9222636 9.7619120 9.1509544 5.5790474 8.3525882 4.6915230 8.8472920 11.2851005 9.7619120 8.5244128 12.9139553 5.5193406 5.0700329 9.0752270 10.6175220 10.2613783 10.6596134 10.4444050 5.8290250 8.2491779 9.6874593 7.8966412 6.7789852 10.8818412 6.7359161 11.7274214 9.9164890 7.6733755 14.0194682 11.2095856 10.8808530 11.6541295 11.0116462 9.4194430 0.3696061 TCGA-E9-A5UO 41 0 NA 420 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA NA mucinous carcinoma yes 0 white not hispanic or latino 296.27.0 NA NA 1 3 NA NA 1 4 1 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.39057e-07 11.7799089 3.7405067 6.4668245 12.3274561 1.9749698 10.0850629 NA 9.2594483 11.7842570 5.5719073 9.7398429 7.5689221 9.3342816 10.5295601 8.3707197 8.7797476 10.9259644 9.3724320 7.8770448 -1.3470317 11.3103615 9.5040113 14.3483802 7.8985959 9.5024482 10.4787969 -1.3470317 10.3957525 -0.3470317 0.2380531 5.2228973 11.2328304 13.2189187 9.9833998 13.6072849 11.8708494 9.8065952 5.8229672 2.9749698 3.3534786 7.8027903 9.1267489 4.2968979 13.2567853 1.4603756 7.5719066 13.8961799 NA 9.5164163 10.8869623 0.2380531 7.8527155 -0.3470317 13.6772288 9.1408832 1.4603756 7.6388848 NA 3.1766100 8.7693870 8.6656678 9.8192063 8.5001005 8.7298586 9.5926224 1.4603756 10.9811570 10.5531551 5.1608395 7.8254708 -1.3470317 9.7938728 13.5507468 8.7120224 10.2973501 11.2517935 6.2823990 -1.3470317 7.3076790 7.5719066 8.5417862 10.7022110 NA 4.6303239 8.3412933 9.3263522 10.9884335 2.1124666 2.1124666 1.4603756 9.7305265 11.2548139 3.3534786 13.6767108 5.1124750 7.4539430 11.6274577 7.7667853 12.2374185 8.8002480 10.9027492 10.5599337 10.3440451 10.5287924 4.4859355 8.8514883 11.2728046 11.8868125 -0.3470317 10.2663722 8.7861853 -1.3470317 3.8452391 8.6947023 9.0259081 9.0061900 9.0094950 14.8435430 10.7938729 9.1378659 7.9174855 -1.3470317 15.1452406 9.7130634 8.7537055 9.9625195 9.7615675 9.3629886 7.7137391 10.5477699 0.0135070 0.0135070 0.0548030 -0.0205490 0.0519560 0.0390650 0.0384890 1.0170000 -0.9628700 0.0246890 0.0246890 0.0246890 -0.0213970 -0.0190090 -0.9811100 -0.0189020 -0.0189020 -1.0288000 1.0226000 -1.0155000 -0.0161540 0.9953000 2.8484000 0.8866600 0.8866600 -0.1336800 -0.1336800 -0.1409100 -0.0661180 -0.0927100 0.0135070 -0.0557830 -0.0205490 -0.0702690 0.0495400 0.0384890 0.0384890 -1.0120000 -0.9628700 -0.9628700 0.0097905 0.0101460 0.0246890 -0.9374700 -0.9374700 -0.9649500 -0.0269880 -0.0190090 -0.0792100 -0.9811100 -0.9795900 -0.9507900 0.0231450 0.9890800 -0.9430600 -0.0161540 1.0024000 -0.0540160 -1.0512000 0.8866600 0.0069435 -0.1336800 -0.1409100 -0.0095426 -0.0124380 -1.0562000 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 6.6014098 10.5433074 6.5234083 7.7484404 1.1940871 11.8722116 1.2379919 NA 9.3690051 6.1528892 NA 5.1887847 -1.3470317 10.0902751 9.6108707 1.8229748 2.1124666 10.1252262 9.8416320 11.4064688 10.5348453 7.3465297 12.0481756 1.6530600 11.3558651 9.5926224 -0.3470317 2.4604018 11.4164630 1.2379919 11.1905042 12.6093285 6.0793077 8.9139626 8.8527155 9.4417615 2.9009730 3.1124666 0.9749698 1.9749698 9.8728166 10.3513137 10.3214850 2.2379919 11.0865529 9.2057121 9.6802581 4.9749698 10.2271636 NA 7.5079112 -0.3470317 12.3584595 9.3584767 8.0334610 NA 8.6628716 5.2677530 12.9077765 NA 13.2022261 -1.3470317 11.3543496 NA 7.2380053 5.3254692 7.7848998 8.1980074 13.581540 6.589681 9.174644 13.607285 9.075781 10.067200 13.256785 12.029033 9.220999 9.537214 12.287627 7.758951 8.541786 8.360402 2.353493 7.874630 11.567054 10.5478609 6.1206485 8.4195722 9.8728166 10.0248197 10.0454411 4.3254656 2.9009730 7.8985959 7.5748841 1.8229748 5.9476638 9.4079473 11.4185364 9.6173839 8.6130450 9.3869058 10.0650837 -1.3470317 9.8192063 10.7490994 9.9482380 8.5984869 10.5051824 7.9453648 NA 8.6194189 4.6754095 NA 10.9884335 3.6072356 11.0089447 9.7305265 7.3289998 12.7697120 10.1672640 9.1438939 12.3479451 10.1378659 10.2389446 0.9749698 TCGA-E9-A5UP 63 0 NA 438 breast stage iia t2 n0 m0 2-10-2014 female 2012 NA NA other specify yes 0 white not hispanic or latino 296.27.0 NA NA 1 2 NA NA 1 1 3 3 3 1 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.39057e-07 11.1184498 NA 6.4701805 12.0469976 -1.3240938 10.9387411 -1.3240938 9.2197639 10.9337425 12.3550256 9.6813901 7.2226597 9.0475422 9.4356536 9.1825689 8.9402082 9.1973659 7.6328673 5.0508064 NA 10.6640951 11.1828167 13.0158241 10.7053977 8.4205995 9.9045842 2.9976898 10.0925629 NA 1.6757708 5.1835619 7.2341861 12.7096186 8.2978173 14.7168256 13.2997612 9.5251706 4.6299627 -0.3242744 4.3481899 8.1020303 11.1387788 5.7310474 12.6633847 2.1352065 9.1605882 14.8988621 6.4959445 9.4995069 10.8047264 8.2399150 6.5584085 NA 15.0408707 10.9248789 NA 8.6429918 -1.3240938 -0.3242744 9.4447768 9.7002125 9.4028349 10.3060325 9.4887450 10.0723702 2.3762070 10.6325046 10.6782289 6.2071471 8.9141701 2.5826523 10.8559854 14.6174550 7.7237620 10.3200724 11.7803642 10.7442079 0.2607483 -0.3242744 8.4718048 8.4927489 9.8146771 NA 3.3196179 8.4604002 8.7418546 9.9009729 2.7632203 4.5337440 5.4571247 9.0311164 11.0975673 3.4306466 13.3305133 6.8606413 7.6501801 12.4195480 12.7163120 12.2681057 9.5102364 9.9296129 10.8562963 10.5690669 9.9396215 4.4306533 8.7908092 12.5627004 12.2637773 0.2607483 10.8425562 9.4579447 0.6757256 3.5855395 10.0195064 9.9266560 9.6364914 9.3908695 15.2594065 11.2784643 10.2635429 8.6285068 NA 15.4640759 9.7678618 12.6874295 10.0105973 9.0518908 8.6771735 7.1954017 11.2474257 0.51333 1.75200 1.77300 0.21192 0.21192 0.21253 0.21729 -0.31096 -0.31096 1.84060 0.21960 1.81700 0.20964 0.21099 -0.30534 -0.30534 -0.30534 -0.30240 -0.30748 -0.30028 0.17317 -0.30533 -0.84115 1.77740 1.80450 0.16820 0.16820 0.16820 0.90734 -0.82269 -0.80352 -0.28778 0.21192 0.22502 0.21253 0.22083 0.22083 -0.31096 -0.31096 -0.31096 -0.31004 -0.30850 -0.84155 -0.30440 -0.30440 -0.30440 -0.30478 0.21099 0.23488 -0.30534 -0.30534 -0.30240 -0.30748 -0.30748 -0.30028 0.17317 -0.29579 -0.84235 -0.84115 1.77740 0.22360 0.16820 0.16820 0.18995 0.20717 0.19786 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.824 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.824 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 5.7418552 11.1028164 0.6757256 10.2517773 2.5826523 10.3205230 -0.3242744 NA 8.2303543 8.2531942 NA 3.7201581 7.1555459 10.0145018 9.7525810 2.1352065 2.2607182 8.5568792 6.9518896 12.1560508 9.6621124 7.6530457 9.1290362 2.2607182 10.7347718 10.0723702 3.5337502 NA 12.2241057 2.4831321 11.9126765 11.4337804 4.8050499 9.7869011 9.5645087 9.9111813 2.9976898 2.7632203 0.2607483 4.2904760 9.0529761 9.8056925 9.6050239 NA 9.0074103 9.0915073 10.2274737 8.2886340 10.0915072 NA 10.2375307 -1.3240938 4.0333173 8.8234029 7.1298589 NA 7.5856589 5.9611672 4.3481899 1.9976898 12.6927478 0.6757256 10.3552456 -0.3242744 5.5337471 1.9976898 7.5337463 9.1845506 13.468739 5.390011 9.123882 14.716826 9.445603 11.076111 12.663385 11.897504 8.391727 9.810833 13.269857 10.671179 8.492749 8.044272 -1.324094 7.899767 12.035103 10.8194675 6.8997666 8.5781406 8.5976064 8.0893933 9.9709833 5.0851569 6.9518896 10.7053977 5.9331524 -1.3240938 6.7632283 6.5176127 10.1316063 10.8631175 9.1362214 8.7485679 12.4204942 2.5826523 9.4028349 10.9443074 11.4153351 9.7816740 10.3968646 8.1934347 NA 9.0069622 3.3196179 -0.3242744 9.9009729 3.3196179 10.4774737 9.0311164 6.9189395 11.9270999 9.0627057 9.9784043 13.5729491 10.6494628 10.2583779 0.2607483 TCGA-E9-A6HE 45 0 NA 468 breast stage iiic t3 n3 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 12 white not hispanic or latino 322.22.0 NA NA 2 2 NA NA 1 3 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3673444 7.3209594 5.7359960 11.7104737 1.2020102 9.0662047 -1.3830778 8.0050732 10.7629883 13.2425938 9.0179355 6.7307989 7.3652490 9.3827565 6.5828405 8.1697251 9.5871621 9.0464630 6.3449758 2.6170633 10.8572511 10.5400122 7.5088398 11.6456529 7.9899212 9.7744031 5.0764864 9.3761121 -1.3830778 NA 7.5027523 10.2609124 12.6493602 8.3736125 13.5321419 12.5224431 10.2391080 7.2788341 3.7463343 7.5799525 7.7333998 8.4781431 6.9920954 11.7481092 1.4243847 10.7121235 13.3202568 6.1008726 10.0516583 9.6191679 9.0157997 6.0764885 0.2020102 14.8143684 10.0672364 -0.3828896 8.7320999 -1.3830778 2.6170633 8.5668829 9.3660874 8.9746082 9.3407171 8.8756222 9.7668032 6.6449623 9.6614503 9.7196879 7.2859413 8.4179559 3.3174922 10.9185523 14.3439129 5.0313599 7.4308372 9.6303787 7.4905003 3.2020258 0.6170163 8.9196949 7.5477937 10.5069403 0.2020102 6.3852412 7.1406181 9.6716605 9.3526122 8.6858344 5.1406192 5.0093740 8.4356382 11.6465159 4.2020180 13.8262429 7.0805809 6.2752678 12.5161298 13.5295245 12.0267122 9.8637968 10.6838181 10.9202661 10.2368176 9.5065601 1.6170633 9.6028981 12.2811700 12.0944349 -1.3830778 10.3325892 7.8068808 -0.3828896 1.9390008 8.0093735 9.1735622 8.4609772 8.4467789 16.2660175 9.5993368 8.0846617 7.3685999 3.4750330 14.4551767 9.5485324 14.3550692 13.5916500 9.4897310 10.1940128 6.6114100 10.5573954 0.84534000 1.17540000 1.20340000 -0.00387790 -0.00387790 0.00010444 0.00750000 -0.00636680 -0.01367700 0.00332990 0.00332990 0.00332990 0.00652620 0.00889200 -0.61076000 0.01950300 0.01950300 0.00000000 0.00000000 -0.63349000 0.00847430 -0.01562900 -0.61114000 0.00905970 0.00905970 0.00360760 0.00360760 0.00360760 0.02188400 0.01028500 -0.00138580 0.00124810 -0.00387790 0.02553100 0.00010444 0.00750000 0.00319100 -0.00636680 -0.01367700 -0.00968060 -0.00401620 -0.00401620 0.00332990 -0.04261700 -0.04261700 -0.04102400 -0.04102400 -0.93622000 0.01950300 0.01768400 -0.61345000 0.00000000 0.00000000 0.00000000 -0.60941000 0.00847430 -0.01711600 -0.63759000 -0.62236000 0.00905970 0.42132000 0.00360760 0.00360760 0.02045900 0.01042400 -0.62484000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8068808 14.3332057 7.4499459 10.1702054 1.0500489 10.7327501 2.6170633 0.2020102 9.5336821 7.7794475 -0.3828896 7.4499459 6.2681087 10.5518527 9.3526122 4.2317626 7.1639505 8.5828405 11.4181582 12.5799521 9.1008820 6.0349090 10.5624999 2.0764907 8.0454162 9.7668032 4.9208364 NA 11.1571841 0.2020102 12.8157314 12.4496495 7.3381552 9.0190021 10.4114720 10.5824797 2.9389820 1.4243847 0.6170163 7.0264471 9.7405310 11.3122844 8.9646776 5.4625464 7.6732334 9.5050382 9.8155011 5.9389844 9.8246807 0.6170163 10.0790471 -1.3830778 3.5712521 9.7663270 7.1390100 0.9390008 8.8649837 8.1228678 6.3918433 -0.3828896 14.1849528 1.2020102 10.8255953 NA 7.7769278 3.9746119 7.8649834 8.8685386 13.073991 6.920836 8.142577 13.532142 9.097846 11.588240 11.748109 10.383171 8.964700 9.809349 13.691239 10.117898 7.547794 11.193304 2.076491 6.907075 9.582119 10.5156576 6.4372344 9.3635704 8.8920166 8.4467789 9.5421209 6.6226800 6.6559757 11.6456529 9.0866981 0.9390008 7.4244107 7.7852269 9.6824723 9.4420148 8.1268309 10.5008450 6.1869125 5.1248492 8.9746082 10.6018306 9.7444057 9.5603036 9.7769274 6.2020180 7.5683407 9.2911514 7.5363661 4.0433183 9.3526122 6.2965363 10.0625883 8.4356382 7.3984162 14.2184207 10.6142356 9.2290031 12.5593873 11.3349467 8.8228493 1.2020102 TCGA-EW-A1IW 80 0 NA 371 breast stage iib t2 n1a mx 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 2 white hispanic or latino 109.61.0 NA NA 2 3 NA NA 3 3 2 4 4 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942656e-06 6.244252e-07 11.3457510 8.6204039 6.9066273 10.8651639 -1.8714426 10.4770021 NA 9.8115452 11.5347556 7.6123665 10.1411751 7.5336918 9.0195749 9.7934422 7.6204039 8.8202942 9.2858976 9.7651752 7.5315624 3.9865293 9.2013530 10.1550740 11.6325005 11.8682257 9.2814692 10.6761681 5.5797624 10.8640961 0.4504855 5.6984074 8.7921086 12.2356859 12.5545532 7.3693417 16.7801314 13.3042171 9.8967349 6.2213068 3.9614381 6.8324546 8.7404976 9.9634166 8.4572253 13.3140455 5.0827452 9.6259035 13.9584715 6.9927367 9.1248053 10.8102283 8.6214050 4.8427979 -1.8714426 12.5508789 8.3084596 2.4504855 8.7687954 0.9359123 3.7724030 10.2334768 11.1865423 9.6633398 11.3469625 10.4314750 10.1260829 2.2160202 11.5773122 10.1218429 6.0710654 8.0172939 -1.8714426 10.5184508 14.8680543 7.9176764 10.9493279 10.8168009 8.4311896 1.7135199 4.8427979 8.6333694 9.1817978 11.6416613 -1.8714426 4.6831406 6.5379421 11.0386311 11.7125735 6.1172358 5.8359089 4.8150528 10.3912327 11.9281358 3.0827537 14.1909973 6.8220379 8.2642601 11.7391141 13.0864688 13.0223261 8.3976772 10.0477863 11.3177574 10.9749675 10.3779603 5.0474119 8.4243196 11.5565181 12.0806548 0.7135199 10.3322044 9.1932932 2.1285574 3.0185096 9.7629079 10.3437802 9.8049485 9.3398306 15.2401346 9.8733844 10.1467508 7.4300469 3.7432564 15.7007179 10.2416416 13.5732096 12.6200279 10.3926999 9.1136810 8.1702095 10.3782388 -0.55677000 0.52485000 0.53467000 0.00027728 -0.00609040 -0.01917700 0.00208050 0.00124810 -0.01259300 0.00610900 0.00610900 0.00610900 0.01028500 0.01028500 -0.54310000 1.53670000 -0.54915000 -0.00221680 -0.00221680 -0.56113000 0.00791750 0.01474900 -0.47986000 3.65690000 0.01028500 -0.01436600 -0.56087000 -0.01656700 0.02426800 -0.54573000 -0.55677000 -0.01188700 0.00027728 -0.01917700 -0.04915400 0.00208050 0.00208050 0.03157700 0.00000000 0.00166420 -0.01925300 0.00000000 0.00610900 0.01335300 0.01335300 0.01335300 0.00555290 0.01028500 0.01028500 0.01474900 -0.54915000 -0.00221680 -0.00221680 -0.00221680 -0.54310000 0.00791750 0.01474900 -0.54219000 -0.55377000 -0.00981850 -0.15338000 -0.01436600 -0.01656700 0.02426800 -0.15439000 0.02454800 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.514 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.514 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8759044 12.9013291 8.8071507 9.7764587 3.7314331 10.6778540 4.3764779 0.7135199 8.7368054 8.7003031 -0.8714426 8.6530923 3.8009724 10.5171061 9.3639665 2.7724136 9.1817978 9.7083380 11.7851989 10.2396862 9.5553553 7.8649525 10.8723331 2.8289971 9.5122549 10.1260829 4.4139528 NA 10.4541371 3.2160202 12.4959653 11.4749258 8.4011803 10.2903123 8.4391635 9.5542911 4.1946387 1.1285574 -0.2864801 10.5843915 8.2040297 8.2331494 10.7256720 5.3953371 7.7594914 7.4116389 10.0972174 6.0769182 9.8333188 -1.8714426 10.4371740 2.8834449 4.8967368 9.6971386 6.5160940 4.1946387 9.7538027 7.7021976 5.6442514 2.0354480 13.1123013 0.7135199 10.0142469 NA 7.8666428 5.4684009 8.4728464 8.9606496 14.122470 5.961440 8.691747 16.780131 9.310324 10.862625 13.314046 10.974041 8.516848 11.031868 13.661941 11.162146 9.181798 8.612367 1.298482 7.888439 11.531829 11.390058 6.977173 8.539002 8.641291 9.916861 10.839604 6.533693 5.870017 11.868226 6.145360 2.450485 7.136979 7.591482 11.769925 10.286213 8.974824 8.716328 12.403948 6.071065 9.663340 10.303476 11.776571 9.607826 10.408741 8.943133 7.514413 8.572509 8.743739 6.059288 11.712574 6.366955 10.832454 10.391233 6.797436 13.062057 9.678335 10.026396 12.819749 10.826387 9.377071 2.376485 TCGA-EW-A1IX 48 0 NA 1208 breast stage iia t1b n1a mx 2-10-2014 female 2008 NA NA other specify yes 1 asian hispanic or latino 117.51.0 NA NA 2 2 NA NA 1 3 3 3 4 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 5.562279e-08 11.2307137 8.7043460 6.6954524 11.6840967 1.7207162 10.9258333 1.3581712 10.2968882 12.2935244 8.3852649 9.9849009 7.9149286 10.0366233 9.0092005 7.4516603 9.2838093 10.9963261 9.8665096 7.4395375 5.4933079 10.5859366 10.1846973 14.1679744 11.6141890 9.4395371 10.8967535 5.0265257 10.6819756 -1.4492963 1.7207162 8.8659436 12.2611699 12.1739895 7.7891984 13.4393469 13.3839805 10.2778634 5.1357565 3.1357483 7.3056815 8.6087856 10.4437161 8.8117135 12.9524734 1.3581712 11.6404099 14.2406281 6.6852197 9.6278032 10.6694106 7.5869674 9.1168479 -1.4492963 13.7110376 11.7909517 2.3581430 8.4621857 -1.4492963 5.2787133 10.3243453 9.9511397 10.3741612 11.8931464 10.3593559 9.8494293 4.5507960 11.7862098 10.6319444 7.0102260 8.2425372 10.7519989 11.1844703 14.7831211 8.7723809 11.9559354 11.6935392 7.6141886 0.8727106 4.8727204 8.8884157 9.3305134 11.6224238 0.5508022 6.2718925 7.1910385 9.6302786 11.1765027 6.9258333 6.3386972 5.0426487 10.5637675 11.6276095 1.1357319 13.4061491 6.5620210 7.4149803 12.6728939 13.4457064 12.9209364 8.5064437 10.4573087 11.0211985 10.8395908 11.6246007 5.2922590 8.6262730 11.2083356 10.2624609 -1.4492963 10.4326726 8.9366562 0.1357975 3.8373075 9.3637734 10.5560675 10.0194180 9.2753077 15.3662648 10.3496707 9.8298240 8.6645362 4.3056787 14.6046986 10.1955515 13.7347781 12.0562333 10.1824256 9.9548710 8.4815310 10.3687249 2.7357e-02 2.7357e-02 4.9256e-02 2.9133e-03 1.5255e-03 -1.5601e-03 -1.6704e-02 1.8030e-03 -5.1846e-01 1.9269e+00 -8.3160e-04 -9.6269e-03 -1.3318e-03 -8.3160e-04 -1.5151e-03 -1.5151e-03 -1.5151e-03 -1.9969e-03 -1.9969e-03 8.7877e-04 3.3809e-03 7.3532e-05 6.9327e-04 6.9327e-04 6.9327e-04 9.3098e-03 -1.1550e-03 -1.1617e-03 3.1910e-03 -1.3862e-04 2.7357e-02 -4.1546e-03 2.9133e-03 -5.2788e-01 2.6357e-03 -1.6704e-02 -2.5346e-02 5.4139e-03 -5.1846e-01 -5.2634e-01 0.0000e+00 -1.9399e-03 -5.2297e-01 1.5255e-03 1.5255e-03 1.5255e-03 1.5255e-03 -8.3160e-04 -8.3160e-04 5.9700e-03 6.9327e-04 -1.9969e-03 -1.9969e-03 -1.9969e-03 -1.8014e-03 3.3809e-03 4.5800e-03 4.9969e-03 6.9327e-04 6.9327e-04 8.3195e-04 9.3098e-03 -1.1550e-03 3.1910e-03 2.6357e-03 -5.1948e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 9.7927771 13.9936078 10.4625603 10.8004999 4.7987193 10.8149432 2.7207162 NA 8.3106823 8.4118808 NA 7.8948681 3.7207162 9.6948147 9.6428903 3.1357483 9.6382567 9.1149435 10.1068208 10.0401401 9.0416047 8.4651790 10.6820078 4.8361968 9.8597017 9.8494293 3.7602422 -1.4492963 10.5574706 2.8727303 12.5674281 11.9003516 8.0224694 10.2829613 7.8081817 9.0605689 3.6382592 0.8727106 NA 3.9083422 8.7951578 9.3962839 9.8704660 4.4334402 8.3739061 6.7005410 10.3006634 7.0020049 9.5807713 NA 11.8225487 6.5676017 4.2232217 9.5261618 6.3882963 4.9937378 9.6461909 8.5078961 6.6435517 -1.4492963 13.4040547 -1.4492963 10.8428279 -1.4492963 8.6813646 5.9686461 7.8105369 9.6289447 13.8983544 4.8727204 8.7927770 13.4393469 10.4486394 9.5876543 12.9524734 12.9197777 9.3470200 11.1659637 13.1157174 10.2293941 9.3305134 8.8715945 0.1357975 7.1946505 11.1634321 11.521439 6.784414 8.773589 9.341142 7.879469 10.962069 7.550794 8.619572 11.614189 7.510796 5.659320 6.504991 6.739284 11.092858 10.732257 8.585277 8.914929 12.583615 6.868206 10.374161 10.261170 10.701493 10.049643 10.819921 9.624266 NA 10.093782 6.739926 6.433437 11.176503 8.546561 10.820920 10.563768 7.530934 13.833231 10.108736 10.274881 12.807961 11.104903 9.913286 1.720716 TCGA-EW-A1IY 38 0 NA 258 breast stage i t1c n0 mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 asian not hispanic or latino 109.61.0 NA NA 2 4 NA NA 1 4 3 4 1 3 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.224912e-07 9.8462418 8.3269858 8.6217841 9.7046194 -1.8252101 10.8651353 0.1746621 10.4329723 11.5239820 8.0755674 10.0099617 7.8906625 7.6864536 9.0012491 7.5777128 9.6320817 9.5033758 10.7518936 8.1676389 5.2936427 9.7648200 9.5366445 13.1607205 11.5093931 10.8106456 10.4838928 7.7002219 11.0205828 -0.8252101 8.0664843 9.4166840 12.1663112 12.7641764 8.5830305 11.0099617 11.6462490 8.7652878 6.4461636 4.2190911 6.1633860 8.6341326 9.9634191 7.5670183 12.8182752 4.1054350 10.8346967 13.4091440 6.3694578 9.5095328 10.4858814 7.3595765 6.6943370 -0.8252101 14.7981604 8.8377251 -0.2404180 7.5189969 NA 4.1747020 10.4338556 11.2008784 10.1347028 11.5325277 10.6134926 9.3471284 1.6341286 10.8904483 8.6884283 4.2190911 8.3914468 11.6097199 10.7743812 14.1152438 7.7470409 11.1489361 11.8580244 10.7211129 0.1746621 0.1746621 8.6992424 9.1935963 12.5394510 -0.8252101 7.1576946 5.8040561 10.2060573 11.9076101 6.5925527 8.3926583 4.3244506 11.2387698 11.9857744 3.7894058 13.7814819 6.7930856 8.3104101 13.1510411 12.0885252 13.4058469 8.2648132 9.8781719 11.2478382 10.9285589 10.5570546 4.5497431 7.5497400 13.2498456 11.1532325 0.7596672 9.6854649 9.8302316 0.1746621 4.3070715 10.1069156 10.9880811 10.9884820 9.9383281 14.4241106 9.6009655 10.4598140 8.1942915 0.9820718 15.7463423 6.0634447 14.1769444 12.7130110 9.8699291 9.2681183 8.4473304 9.5811237 -0.0103610 0.8176800 0.8152300 -0.0117400 -0.0085677 -0.0084297 0.3117800 -0.0111890 -0.0162830 0.3004300 0.3004300 0.3004300 -0.0059433 -0.0059433 -0.0176470 -0.0104990 -0.0104990 -0.0013769 -0.0027618 -0.0122910 0.3159500 0.3061800 0.0000000 0.0000000 0.0000000 0.0089009 0.0089009 0.0089009 0.3863800 -0.0103610 -0.0103610 0.2774300 -0.0090958 -0.0084297 -0.0121730 0.3032300 0.3032300 -0.0111890 -0.0111890 -0.0162830 0.3976300 -0.3699600 0.3119400 0.3053000 0.3053000 0.3053000 0.3246400 -0.0059433 -0.0140810 -0.0116020 -0.0104990 -0.0013769 -0.0027618 -0.0095696 -0.0122910 0.3049000 0.3092200 -0.4700300 0.0000000 0.0000000 -0.0030386 0.0089009 0.0089009 0.3863800 -0.0071869 0.0048668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.386 0.386 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.394 0.394 0.300 0.300 0.305 0.305 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.386 0.386 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.394 0.394 0.300 0.300 0.305 0.305 0.133 9.6372030 12.8896439 5.6093295 9.3719175 4.7601145 9.5739787 2.4226367 -0.8252101 7.5798424 9.0107510 -0.8252101 9.1401316 -0.2404180 10.8979351 8.8550603 0.7596672 9.9333404 9.9266632 10.9308401 8.3219056 9.5045195 7.7838796 10.1862774 2.9295827 7.2910445 9.3471284 5.1519806 NA 9.2067465 3.6982629 12.3610472 12.2132769 9.3187218 10.6602785 9.4595249 8.9337567 4.0573463 2.6341286 -1.8252101 10.3026951 7.0012494 5.3345719 10.6238494 4.5322546 7.5319888 4.2190911 10.0036306 5.6504343 9.3884126 -1.8252101 12.1341594 3.6665521 6.1690551 10.1649821 5.9141435 6.4875844 9.5295010 7.8185573 6.4035200 NA 13.2429332 -0.2404180 8.7321644 NA 8.8471263 5.3446261 8.6775326 8.7492942 12.864417 5.759665 9.138319 11.009962 10.117948 11.357561 12.818275 12.376212 9.562718 10.704375 13.938510 9.238770 9.193596 7.912793 1.634129 7.757783 11.581437 10.716523 7.518997 9.657005 8.355853 9.184530 9.784097 6.013904 7.776472 11.509393 7.216360 2.818564 4.956061 7.368670 11.659146 10.741468 8.166223 5.832913 11.757901 7.262163 10.134703 11.128170 11.214305 9.059634 10.808831 9.162675 1.174726 8.694612 10.215634 7.988482 11.907610 7.990084 10.608808 11.238770 7.180325 13.411014 10.561641 11.269933 12.954215 9.523982 9.640267 3.789406 TCGA-EW-A1IZ 53 0 NA 554 breast stage iiia t2 n2a mx 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 5 white not hispanic or latino 109.61.0 NA NA 2 5 NA NA 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6.764606e-06 2.567081e-06 11.0366509 4.5021842 7.1622795 11.7770774 0.7742494 10.0398774 1.3592400 9.2958628 11.0099774 9.4842076 9.6267919 7.5976295 8.8322539 10.2535374 8.2088908 9.2357419 9.8363084 10.1649688 7.2621024 5.0596624 10.6561410 11.3338784 10.4462456 10.9284475 9.3963141 10.3192268 9.5030332 10.0492112 -0.2256662 0.3591838 8.8076853 10.8166057 11.9101319 5.2820580 12.7669352 12.4181185 9.2840373 5.7966289 3.0961944 4.3288508 8.9150921 8.6826551 6.5880430 12.2178535 -1.2256662 10.9824967 13.5295672 4.6569082 10.1419665 10.6626251 7.2254735 7.4431474 2.2337040 14.8787118 13.3665156 1.7742494 8.1857734 NA 6.3963136 9.5241319 9.8867018 9.8755815 10.3699860 9.3880517 10.0590865 5.3592260 10.4528625 10.2530320 5.8076846 7.3134209 10.8028591 10.2666163 14.7001413 5.8260705 11.0814631 10.3134211 9.1783394 1.3592400 7.3778890 8.5523394 7.8670192 10.0334171 NA 3.9837142 7.3629774 10.5072777 10.3713837 6.3741753 8.1427688 4.2005279 10.3095377 11.8099206 5.3288508 13.3642645 6.3134218 7.3999708 10.4533025 11.2867559 12.5002676 8.0363572 10.4126982 11.6561410 10.0411952 10.4167653 3.1665869 9.6000162 11.1517440 11.2623535 0.3591838 10.2290757 8.6901419 1.3592400 2.6830676 8.7980168 10.9186019 9.5621649 8.3516910 15.2216685 9.8996758 9.2899622 8.6055695 2.8617172 15.1178818 7.7686157 12.1730060 11.7447278 9.4145072 9.5637959 7.1751413 9.5689219 0.00499690 0.00499690 0.00499690 -0.08757900 0.00124810 -0.00119100 0.00000000 0.00661330 -0.02126100 -0.00238410 -0.00238410 0.00610900 0.00319100 0.00319100 -0.00027724 -0.00027724 -0.00110480 -0.00110870 -0.00110870 -0.00774820 -0.27070000 0.01084200 -0.00027724 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.01195800 0.00499690 0.00499690 -0.00083160 -0.25769000 0.00597000 -0.00119100 0.00000000 0.00000000 0.00661330 -0.02126100 -0.01601700 0.00402430 0.00031548 -0.00238410 0.00583090 0.00583090 0.00583090 0.00583090 0.00319100 0.00319100 -0.00027724 -0.00110480 -0.00110870 -0.00677770 -0.00677770 -0.02516200 -0.27174000 0.01084200 -0.27117000 -0.00027724 -0.00027724 -0.28442000 0.00249690 0.00249690 0.01195800 0.00027728 0.00676950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.4185694 11.3071053 0.7742494 8.6260112 7.2938983 10.8021683 5.8932044 -1.2256662 8.9653217 7.5021826 NA 6.1405844 2.5816164 10.9812766 9.7458059 2.5816164 9.0186261 8.8254711 9.1296135 10.9717862 9.6082593 6.7966302 10.4342582 2.0773114 6.9290808 10.0590865 4.2661119 -0.2256662 11.0677340 2.4746956 12.9904777 12.6145485 7.6384482 9.9112534 8.8617253 9.8597348 1.7742494 3.0221902 -1.2256662 3.5816164 9.2036691 10.8237706 10.8261510 3.9035493 7.9091508 8.0757583 10.7436488 7.1274094 9.6705948 NA 9.4747021 4.2661119 3.2336887 9.5255386 6.3293120 8.8497416 9.5832265 8.9353943 12.1959328 NA 13.8120238 2.2337040 10.3331613 NA 8.1340119 4.5816164 7.7515421 9.0837386 12.528183 6.681153 8.967788 12.766935 10.330289 10.383441 12.217853 10.401340 8.871412 10.238808 12.784266 10.223927 7.867019 7.998264 2.774270 7.545752 10.503883 10.436931 3.903549 8.745806 9.166580 8.112397 10.321605 8.966555 8.836309 10.928448 8.792463 2.359212 7.385287 7.234841 9.859735 11.060531 6.840351 10.556851 9.264110 8.913814 9.875582 10.315359 10.904189 10.206804 10.365317 8.231643 9.192115 9.740566 7.309537 9.843041 10.371384 3.297822 11.494507 10.309538 7.539267 13.853914 11.110769 10.799402 11.692753 11.198691 8.908689 4.861727 TCGA-EW-A1J1 38 0 NA 575 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 109.61.0 NA NA 4 2 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.337367e-07 1.668684e-07 10.58474796 4.80278775 7.27273148 11.39858942 -1.64025395 10.17442427 1.94482097 10.00099039 12.23270908 12.52647572 10.45325942 8.04983984 9.03932185 8.40696560 8.32273803 8.36265705 12.11065351 9.62487074 6.72616365 1.81925943 10.92136849 7.58866067 14.26367663 12.17412390 9.30674823 10.60480024 6.26673220 10.36756993 NA -0.64025395 8.15100487 10.81002208 13.84777607 6.01089394 12.85900259 13.05060376 9.36054601 6.44199133 2.26672658 4.26673408 7.48396326 9.90045431 5.06028089 13.41427659 4.29057922 9.90625402 14.22658952 2.06028954 9.25960652 11.41359805 8.23482318 10.21859992 1.94482097 13.73056943 11.76253552 -1.64025395 8.06028144 NA 4.66362357 10.71904231 9.87307601 9.52286239 11.75885267 10.07623266 9.48719148 -0.05514155 11.90118051 10.32598672 7.58625434 6.76072128 NA 12.70614780 13.85016001 9.02602152 9.49298397 10.38532749 8.85869097 -0.64025395 5.14119979 7.72178550 9.24477553 10.37176793 NA 6.64061225 7.42861979 10.19273184 11.41122073 15.04106653 6.76923221 4.62662603 10.98349472 12.30437092 0.35985847 12.87775725 4.86763458 8.40696560 12.97977522 9.50577405 13.09846193 6.66818154 9.68289665 10.37734622 9.97244309 10.65331346 5.94480458 8.63013714 13.00403613 11.83139007 NA 10.01939182 9.23865910 1.52977098 2.82189386 9.17762509 10.21354122 10.80614978 8.66818083 15.29892743 10.77531957 10.18877167 9.55890070 0.94478350 15.78963268 8.40832889 12.00842414 10.44332122 10.24934578 9.63305461 8.61132437 10.24082197 0.0035411 0.0035411 0.0035411 0.0305240 0.0299610 -0.7984000 0.0209760 -0.3936900 -0.3936900 0.1314700 0.1314700 0.1231100 0.0071551 0.0071551 0.4030300 0.3676400 -0.4006900 -0.0248640 -0.0248640 0.0194360 0.0106770 0.0025692 -0.8104200 -0.0174570 0.6446000 -0.0334700 -0.0334700 -0.0334700 -0.0147070 -0.8225600 0.0035411 -0.3806100 -0.8086900 -0.8147800 -0.7984000 -0.8276900 0.0234990 -0.3936900 -0.3936900 -0.3936900 0.0194360 0.0194360 0.1314700 0.3987000 0.3987000 0.3987000 0.3983700 0.0071551 0.0071551 -0.4056700 -0.4006900 -0.0248640 -0.0354650 -0.0354650 0.0000000 0.0079900 -0.0067093 -0.8283400 -0.8104200 -0.7844100 -0.8097600 -0.7818800 -0.0334700 -0.0147070 0.0213960 -0.8011500 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.789 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.789 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 8.7671095 11.8694932 9.1354520 8.5558292 5.1280253 11.4026982 3.5692966 NA 8.0585465 7.1768254 NA 6.9214351 -1.6402540 10.1088732 9.4539196 0.9447835 7.4313045 9.3082091 11.7528300 8.3905091 8.9527939 9.2501060 10.1887717 2.6817641 7.9763906 9.4871915 2.7521491 -0.6402540 9.6653336 3.4042356 12.7447605 11.8788638 7.2516254 10.2248018 8.8546973 8.9249440 2.8834058 0.9447835 -0.6402540 0.6817641 9.0740874 9.2712338 10.2835408 0.9447835 10.5677225 6.3371223 9.7294392 4.7521598 9.8228552 NA 11.3113087 3.1147335 6.6266290 9.9935454 7.1640048 5.5595132 8.5159249 8.0928570 8.5146600 -1.6402540 14.0010187 1.1671652 10.2701098 NA 7.7882022 4.6996904 8.0689255 7.6952325 14.741783 4.529765 7.806925 12.859003 10.988287 9.574768 13.414277 13.787122 8.979145 10.985322 12.580296 10.851194 9.244776 8.738137 2.529771 8.358432 11.893780 10.9660157 6.9448046 9.3738624 9.3342565 7.6547384 11.0651740 7.2332860 7.7607213 12.1741239 4.7348830 0.9447835 3.6817753 6.5931267 11.2340548 10.7617880 8.3752567 9.5796154 11.4309690 7.0108939 9.5228624 11.2508660 13.7531317 8.8017484 11.1329810 10.1092923 NA 9.3654734 6.7478586 6.3654668 11.4112207 6.4042356 11.7894382 10.9834947 7.2053319 14.3638208 10.1824127 9.9814358 12.5052964 9.4968330 9.7687022 2.1671973 TCGA-EW-A1J2 50 0 NA 403 breast stage iib t1c n1mi mx 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 1 black or african american not hispanic or latino 109.61.0 NA NA 2 2 NA NA 3 3 3 3 4 3 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 1.668684e-07 10.7049397 8.2997067 7.0910439 11.0729970 2.2541707 10.9166904 NA 10.2006842 11.9045530 9.8634386 9.8403111 8.1799121 9.1661063 9.6328567 7.7661234 9.4819685 10.3758324 9.8248173 8.0076435 4.3100129 11.0004117 9.8474063 10.6968879 11.3470588 9.5584238 10.4269849 5.5453939 10.7525353 -0.9936661 1.9131096 9.1374490 13.5718727 12.9846327 8.5120467 13.6296594 13.7014906 9.9644252 7.0696302 4.0936954 6.8359582 9.0506293 9.5095640 8.9428731 12.8055167 5.0174632 10.6054505 13.5131624 7.2589005 9.1707273 10.6314873 8.1686265 8.4282999 NA 13.4618121 9.6305737 2.9131288 8.2765306 -1.9936661 4.7875944 10.2867159 10.4687374 10.1342294 11.6795441 10.6223244 9.6319439 2.7611150 11.8875403 10.2092772 6.5337128 9.0567640 5.6786607 11.4327619 14.7807004 8.5206925 11.6663424 11.9276112 8.5560197 3.0506236 5.2350530 9.5327342 9.6314872 12.2516392 -0.4088951 6.1661068 7.0451535 9.9665990 11.4198630 6.6927354 6.8485854 5.3008559 10.7142412 11.9216477 2.5297960 13.6604515 5.7066742 7.6997224 13.0854698 12.7113814 13.1834210 8.3681790 9.8010571 11.1485017 11.0215491 11.4327619 5.4819673 8.3213847 12.0994050 11.8194150 -1.9936661 10.2467282 9.1277687 1.7066853 3.8691805 9.7982119 10.3159956 10.4009657 9.1811607 14.8995722 10.3698223 10.0233915 9.0843859 4.6786579 15.3367669 10.2153837 12.8909303 12.7930152 10.3312594 9.4682261 8.6374121 10.6263930 0.00000000 0.90816000 0.91723000 -0.00041585 -0.00041585 0.00430210 -0.00013862 0.00000000 -0.41322000 0.00569190 0.00569190 0.00569190 0.02175400 -0.01476300 0.00680440 0.00680440 -0.40462000 -0.41641000 0.00305220 0.00917050 0.00180300 0.00875280 -0.27344000 0.27036000 0.28010000 0.00194180 0.00194180 0.00194180 0.01436800 0.00000000 0.00000000 -0.00239580 -0.00041585 0.00958830 -0.00110870 -0.00013862 -0.00013862 0.00000000 -0.41322000 -0.00097017 0.00499690 0.00275250 0.00569190 0.00430210 0.00430210 0.00430210 -0.01940000 -0.01476300 -0.01476300 0.00680440 -0.40385000 0.00305220 0.00305220 -0.00815380 0.00402430 0.00180300 0.00652620 -0.52920000 -0.27344000 0.27036000 0.01070300 0.00194180 0.00194180 0.00027419 0.00489390 -0.40340000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0027084 13.8304977 8.5317557 10.3485876 3.7875996 10.4377327 1.0062621 1.4656611 8.2577174 8.2927928 -0.9936661 8.9048366 3.1761632 9.8164050 9.3582784 1.1761313 9.4885389 9.8176098 9.8765998 9.1635820 9.8523405 8.3225168 10.8228188 2.8642159 9.9977569 9.6319439 5.5531301 -1.9936661 10.3261894 4.1761632 12.6207149 11.9106816 8.0936980 10.2120283 9.0090501 8.7661234 5.0062352 1.7066853 1.0062621 5.8071359 8.1547118 8.6042875 9.9146278 6.0669309 8.0678629 5.4491784 10.1604203 7.0396582 9.8188135 -0.4088951 10.6577353 3.1355185 4.8517241 9.5280417 6.4753476 3.8391231 9.4950795 8.8454389 5.7273351 NA 13.6346806 0.8136068 9.8930747 -1.9936661 8.3281633 5.8264137 7.9792148 8.7066749 13.036395 3.983514 8.283522 13.629659 10.672459 10.444247 12.805517 12.661430 8.702759 10.932131 13.606467 10.786570 9.631487 9.132939 NA 7.570385 11.518111 11.2415014 7.5337121 9.1585198 9.0160636 8.2217679 10.3449297 7.1095225 7.1711418 11.3470588 6.3681782 1.4656611 8.4166865 5.8155216 12.3618615 10.5817743 8.5692408 8.1774121 12.8696954 5.4980881 10.1342294 10.3722841 11.6624365 9.8063260 10.7014634 9.1483421 NA 9.4139968 7.9144473 5.4656676 11.4198630 8.3725573 10.7546376 10.7142412 7.5434534 14.0158232 10.0132624 10.2823595 13.1570137 10.5219349 10.2910591 0.8136068 TCGA-EW-A1J3 61 0 NA 504 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 white hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 4 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.39057e-07 9.9097640 4.8793480 7.7145368 10.4304442 -1.5799219 11.0938875 0.7418337 10.0300181 11.9285774 8.4170955 10.6598128 8.1099142 7.6583208 8.3101801 9.5549840 9.4283447 9.9949826 10.4258913 7.4086006 3.9117683 11.7215551 8.8824184 11.9705426 12.2620699 9.2480526 10.5087043 4.6293683 11.0209857 0.4198625 5.9745041 7.3914593 11.5058864 12.9192637 6.1947037 15.8454516 13.4669973 8.1996355 7.6244870 4.3025603 4.9897703 8.8905750 9.2151439 7.4588347 13.7699574 1.0522072 11.0910147 14.3487120 3.0637790 9.5797873 10.9718645 7.1647501 7.1546257 0.7418337 13.3706820 10.6693258 1.5898593 6.6097402 NA 3.8122312 9.4927187 11.2161585 10.1393049 12.4310559 10.5352849 9.3777437 1.5898593 11.2904734 9.4973994 6.9668100 8.0290950 -0.5801375 11.8243924 13.8960610 8.1738680 10.4032659 11.4227311 8.7982109 2.0048609 2.7418337 8.9648806 9.6790708 11.8684195 0.7418337 5.7774671 6.4086015 10.6770092 11.0366946 11.2599071 6.4478222 3.3741075 10.8041601 12.5176190 4.0346295 13.8577981 6.5179481 8.2685392 12.5738638 11.2804211 13.1159055 7.7730627 9.4765538 11.4612329 10.7148440 10.9085093 4.1748059 7.8895581 12.9613152 12.8331473 NA 9.7730629 9.1168835 2.0048609 4.2015398 10.2033235 10.3598625 10.8343370 9.4036222 14.8792996 10.1613830 9.7407166 10.1478364 0.7418337 16.1895731 10.5511299 12.9316687 12.9471487 9.8170559 9.1914055 8.3372883 9.9381020 -0.00221680 1.24070000 2.31540000 -0.00537510 -0.00843850 0.00000000 0.52415000 -0.00470790 -0.00470790 0.00208050 0.00208050 0.00208050 0.01628600 0.01628600 0.01614600 3.57090000 -0.75547000 0.00416320 -0.00025910 -0.00110870 0.00000000 0.01223700 -0.74792000 3.65690000 -0.00180140 -0.01670400 -0.01670400 -0.01670400 0.61516000 -0.00221680 -0.00221680 -0.00143630 -0.00110870 0.00000000 -0.01282000 0.52415000 0.52415000 -0.00470790 -0.00470790 -0.00470790 -0.00097017 -0.00097017 0.00208050 0.00180300 0.00180300 0.00180300 0.00180300 0.01628600 0.01628600 0.01614600 -0.75547000 0.00416320 -0.00025910 -0.00025910 -0.00110870 0.00000000 0.01293400 -0.75279000 -0.74792000 0.42805000 -0.00138580 -0.07787800 -0.01670400 0.61516000 0.00221930 0.00917050 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2368996 11.6731726 6.4860048 9.1418696 2.2272790 11.1345909 1.0048968 -1.5799219 7.9629480 8.0976356 -1.5799219 7.6137865 0.4198625 10.6633876 9.4826368 3.5492009 6.8875216 9.7174055 9.6451234 9.7139623 10.1472495 8.0253954 10.0856960 1.0048968 8.4114377 9.3777437 3.0048789 -0.5801375 9.6408989 5.0048789 12.1507046 12.2170709 7.5205786 10.5910928 9.0745520 9.2504313 4.9590746 1.4199164 1.2272482 7.0272459 7.5205786 7.0601609 10.3286839 4.4199164 8.1372842 5.0048789 9.6814233 4.9590746 9.1822980 -0.5801375 9.7151110 0.7418337 5.4085998 9.9990528 6.0098286 2.5898354 8.3799181 6.2591199 4.5284400 NA 13.8648339 -0.5801375 9.0419679 NA 8.0029989 4.9745064 8.1930551 8.1979931 14.694409397 6.070966720 9.021686811 15.845451592 10.057772595 11.236099722 13.769957392 12.927896454 8.644737768 10.450927904 13.758965716 9.994982569 9.679070809 12.224349610 0.004896843 7.660707613 11.254189568 10.6134414 7.4967316 9.4395068 8.4436705 9.4478980 10.2490005 5.3387809 4.5696612 12.2620699 5.3971971 2.4199164 7.9571346 7.7761481 10.1613830 9.8870120 8.8314270 6.8036197 11.6931289 4.3506528 10.1393049 10.5222199 11.1000558 8.6330203 10.7686442 7.7553062 0.4198625 7.9132311 6.8784863 3.0637790 11.0366946 6.5440371 10.9728229 10.8041601 7.2528064 14.0387030 10.5346344 10.1160142 13.0892994 10.6893350 10.1397327 0.7418337 TCGA-EW-A1J5 59 0 NA 477 breast stage iib t3 n0 (i-) m0 2-10-2014 female 2010 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 109.61.0 NA NA 1 3 NA NA 1 3 3 4 1 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 4 1 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 1 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 1.009487e-05 3.191507e-06 10.9863286 6.8053195 7.2007054 11.1427788 0.8813514 11.2040884 -0.3409888 10.2715244 12.3862454 11.6734486 9.8409436 8.1772885 8.8112478 9.2357622 8.3674724 10.0817287 10.3109117 9.6641198 7.7357787 3.0281978 11.0148647 9.6400546 9.8821603 11.5919160 9.3266661 10.5904393 7.5293275 10.3942371 1.0740258 3.9808936 8.8877817 12.2647512 12.7984611 5.9566445 13.5868645 13.3351038 8.5847649 4.8813563 2.4663139 7.2135524 8.8397011 9.4009917 6.9898804 12.5463741 4.6739125 10.4689991 13.7456522 7.0880207 9.1654359 10.4997410 5.6362418 8.2071427 1.0740258 14.9621464 9.7804966 2.3959402 7.8154678 -1.9257686 3.9808936 10.4171863 11.2101907 9.6457532 12.5044531 9.5658536 9.7074499 8.0655222 11.7825456 10.6478844 8.1019064 9.5837755 1.3959402 10.6838719 14.8972434 8.9652071 11.2497061 11.9888528 9.7835153 3.5658530 3.9319856 9.8913839 9.3840453 11.8539251 -1.9257686 5.7250513 7.1156596 10.3709168 11.3681906 4.5169418 7.7605011 5.8553594 10.7837306 12.0974951 5.7744392 13.8699895 6.1929418 7.3617131 12.0801513 10.5563044 13.1348654 8.5179799 9.7696638 11.1504822 11.1322258 11.5345844 5.4315528 8.1427790 12.5994602 12.4353276 0.8813514 10.2940765 9.1929418 4.7464256 4.3426614 9.9756217 9.9210580 10.2157884 9.8044707 15.0052229 10.9688183 10.2715244 9.2834540 3.2834477 15.1776162 9.8712567 14.1241893 12.4145462 10.2288187 9.4620180 8.2122722 11.3473722 0.93398000 1.40740000 1.40740000 0.01315700 0.01315700 0.02617700 -0.04513800 -0.01208000 -0.55311000 0.00000000 0.00000000 -0.02166900 0.00036033 0.00036033 -0.01821400 3.65690000 -0.55741000 0.00382970 -0.00057363 0.02084700 0.00063765 -0.01111500 0.47437000 0.47437000 0.47437000 -0.05797800 -0.05797800 -0.05797800 0.45965000 -0.03414100 -0.01772100 0.00882370 0.01315700 0.02617700 0.02617700 0.01097700 0.01097700 -0.01208000 -0.55311000 -0.55311000 -0.03357900 -0.00351820 -0.58277000 -0.00904600 -0.00904600 -0.00904600 -0.00904600 0.00036033 -0.00391980 -0.01821400 -0.55741000 0.00382970 -0.00057363 -0.00057363 0.02084700 0.00063765 -0.01111500 -0.57599000 -0.58337000 0.47437000 0.00923030 -0.07887400 -0.05797800 0.46256000 0.00883620 -0.04758500 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5159074 12.3707017 7.5497339 9.7852373 4.8154678 10.1521513 3.7744392 -0.9260427 8.4479531 8.9312041 NA 7.4468658 3.6887063 9.9936088 9.6419567 5.5897006 8.4015532 9.4359444 9.5169441 10.3774960 10.0698702 8.7060871 10.1437860 3.6589655 8.5788195 9.7074499 3.7744392 -1.9257686 10.7572146 6.3028198 11.7686849 11.8375242 7.6831792 9.0754088 12.2729060 8.9053079 6.6887105 0.8813514 1.2439128 5.2135534 8.2514199 7.6701903 9.7670519 4.1614605 8.4254811 5.3501259 9.7219087 5.5334325 10.2360771 -0.9260427 9.8553603 3.0281978 5.0281978 9.5672857 7.3073566 5.8877811 9.4490401 9.1197603 6.1561498 -0.3409888 13.0973218 0.3959402 9.8981638 -0.9260427 6.6850249 5.2135534 7.5148695 9.0838293 14.8933683 5.6813312 8.5456758 13.5868645 10.4857764 11.0038138 12.5463741 12.7584753 8.5044532 11.2227949 13.5113300 10.6976535 9.3840453 8.5044532 -0.9260427 7.7779043 11.2570156 11.5688561 8.3524500 8.6542590 9.0069535 9.7097187 10.2122308 8.0740007 5.8749002 11.5919160 5.8154678 3.2439280 4.9808890 7.2807949 10.1617949 10.7886754 9.0227767 8.3697696 12.6432035 7.4071556 9.6457532 10.8799459 11.0484151 9.5547909 11.0214549 8.6295482 0.0739573 8.6106362 6.9221538 7.3663222 11.3681906 5.7178573 10.9155355 10.7837306 8.2376502 13.1354562 10.1207836 9.6523732 13.4758801 10.3562203 10.4609408 2.1614685 TCGA-EW-A1J6 70 0 NA 875 breast stage i t1c n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 109.61.0 NA NA 1 2 NA NA 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 4.449823e-07 11.1036667 4.0711362 7.6298680 10.9903223 -1.1382828 11.4100238 1.1835818 9.7196645 10.6601553 8.3694783 10.7216065 7.0316080 7.8475253 8.6929906 8.4634545 8.8260244 8.9398342 10.3699735 7.8418228 4.8158777 11.3051452 8.9935405 13.4734576 10.1591730 10.0988935 10.5438003 6.9438323 11.4189007 -0.1382828 2.0316069 7.1745662 10.3480158 14.1742829 8.6850508 12.0042693 12.7619843 7.9570806 7.1000883 1.8616775 10.2070888 8.9047108 6.6098761 9.0127000 13.1671041 2.3211200 9.9597157 15.1078118 3.3852516 10.2208841 10.9754257 7.0953031 7.7412667 2.0316069 13.5512410 7.6302322 2.6690494 6.2367222 NA 2.7685655 8.6348227 10.0607424 10.1060474 10.2652282 9.4114682 9.0378566 4.7924233 11.4308271 9.8418231 6.0215552 6.5411632 3.7196654 11.3061808 13.5995118 7.5730753 10.7983215 10.9996353 9.2540011 NA -1.1382828 7.2582881 9.2963117 10.5190020 -1.1382828 4.8158777 7.2837486 11.6436579 9.9491463 5.3211164 7.1378078 3.9060825 11.3901377 12.1205440 1.8616775 12.7724200 6.7071741 8.6641998 10.0069789 10.3704687 12.5516815 7.7008870 10.5499338 11.2742534 10.5104905 10.0303557 3.4466400 8.8289098 11.8602740 12.3091543 NA 10.3540375 8.7835244 1.6690268 4.2879450 8.9741232 11.0471785 11.2824333 9.3744240 15.1959394 10.6565055 10.1931604 10.0076157 1.8616775 15.0052461 4.9060776 11.7689498 11.2542693 9.6770668 10.0165016 8.1654643 8.9464920 -0.534700 0.324950 -0.131220 0.320120 1.130700 0.000000 0.320120 0.318030 -0.545780 0.319800 0.319800 0.333670 1.140500 -0.548850 0.324190 0.324190 0.328820 0.326240 0.322860 0.324790 -0.537840 0.321410 0.312740 0.334150 0.327940 0.272850 0.346000 0.286780 1.160400 -0.559070 -0.534700 -0.519590 -0.556970 0.000000 0.016146 0.320120 0.339500 0.347130 -0.545780 -0.556370 -0.598960 0.356570 -0.575460 -0.537440 -0.535910 -0.541080 -0.569020 -0.548850 -0.583120 0.341450 -0.548750 -0.559670 0.322860 0.322860 0.317870 -0.540190 -0.537440 -0.561760 -0.567530 0.334150 0.362970 -0.595560 0.286780 0.326890 -0.554070 -0.570550 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.246 -0.564 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.246 -0.564 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 9.7938983 9.1824840 5.6430423 8.5810725 3.8158828 10.8711623 4.4162723 NA 8.3454993 8.5481842 -1.1382828 6.8717919 2.8616775 10.8224096 9.7134326 1.4466268 8.1331463 10.5216794 5.3535350 10.6056764 9.6585505 7.8757039 10.0760026 1.6690268 7.8158796 9.0378566 2.7685655 0.8617172 10.7485233 2.7685655 12.8395895 11.9504718 7.6199067 9.7335887 11.3692305 10.0190305 3.5055353 2.9491427 2.3211200 1.8616775 9.9825694 9.2889964 11.3282699 5.3535350 9.7656105 7.0316080 10.2926587 3.9060825 10.3876936 -1.1382828 11.1554426 1.6690268 5.4008419 10.1711883 5.3279855 4.9909685 8.3066983 7.3333584 10.6199068 2.3211200 14.3206348 0.4466797 10.2203348 0.4466797 9.1436136 5.6945738 8.8303504 9.3241857 11.882624 7.476393 10.006342 12.004269 10.330308 10.254538 13.167104 12.435686 8.634279 10.044078 12.566884 10.979651 9.296312 8.638117 3.183614 7.616571 11.618031 10.245388 7.609876 9.119071 8.978027 8.798321 9.676979 5.872910 5.959715 10.159173 8.841823 2.861678 5.970207 7.261965 8.163180 10.642223 8.160891 9.719664 10.313410 6.856037 10.106047 10.774947 10.896482 8.827468 9.495587 6.337417 4.970209 8.286689 7.090695 6.174566 9.949146 4.505542 10.339948 11.390138 7.080852 13.612704 10.629454 10.650402 12.130372 9.798321 9.660155 3.254004 TCGA-EW-A1OV 56 0 NA 789 breast stage iib t2 n1mi mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 117.51.0 NA NA 4 3 NA NA 2 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.289559e-06 6.938058e-07 10.88117202 7.27179822 8.11046400 11.52179710 -0.92303052 9.87145696 -0.92303052 9.18032890 11.58061835 9.02394725 9.95738983 8.03414307 8.82523389 9.28527528 3.46935203 9.80751110 9.13232338 9.91466901 8.01955570 6.55277513 10.23565072 9.59372594 8.75299807 10.00481905 9.81766514 10.64452184 9.11595997 10.18229478 -0.92303052 NA 9.62971015 10.90040827 12.43610423 6.92878957 12.47845393 12.39868732 9.93424447 4.16450473 -0.92303052 5.56889552 8.84025330 10.03776698 6.24696666 12.17556667 1.07703786 10.94663488 12.82176978 6.24696666 8.90428839 10.50697080 6.45207976 4.56889552 NA 14.65085980 13.46909611 2.24695527 8.79643001 -0.92303052 6.45207976 10.02248489 9.97110091 8.77921375 10.17901671 9.92644619 10.29802384 4.39896596 11.30013774 10.37910876 4.66200606 7.45641931 14.11942717 10.58582617 14.78534361 7.30912615 10.56136041 10.29196724 10.10563775 1.88440255 5.12143405 8.97034263 8.96730524 10.70137959 NA 4.95968207 6.52825249 9.74769722 10.43294271 12.91466897 8.13773712 5.20632283 9.82103395 11.86065322 2.98393302 13.04002740 4.07703786 6.72089679 10.50225690 11.63928345 12.93667288 7.98993032 11.90378814 10.37682149 9.69817714 10.92566399 4.16450473 9.19078324 11.46640352 11.31245695 -0.92303052 10.56538335 9.28892927 0.07710624 3.88491045 10.07985608 10.70867284 9.32496852 9.12825009 14.71037688 9.58483570 9.67136556 8.32259384 1.39895228 14.16934396 8.07985594 13.36713190 11.62103947 10.11595997 10.14447535 8.05432104 10.17057081 0.2194100 0.2194100 0.2262300 0.0068044 0.0012025 -0.2136700 0.0207630 0.2245300 0.2245300 -0.6744400 -0.6691900 0.0031910 0.2249900 2.9654000 0.0196430 0.0114000 0.0114000 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.4304000 -0.3708700 -0.0065050 0.0042828 -0.2339700 -0.2339700 0.1637000 -0.0502350 -0.4339800 0.2194100 0.0068044 -0.4423200 -0.2136700 -0.2136700 -0.4474900 -0.4474900 0.2245300 0.2245300 0.2245300 0.0068044 0.0072217 -0.6744400 -0.1906100 -0.1906100 -0.1906100 -0.1906100 0.4306600 0.4534300 0.0196430 -0.4388600 0.0072217 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.4332200 -0.4230900 -0.6619800 -0.0065050 0.0282000 -0.2146600 0.1637000 -0.0502350 0.0274970 0.0310140 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 10.8248145 12.2189885 0.6620232 9.7280928 6.6990935 12.2124297 6.4864312 -0.9230305 9.0442673 4.8843977 -0.9230305 8.5385203 2.5364757 10.3166396 9.3728100 3.9350259 11.6624731 8.9489462 8.0312375 9.6769539 9.5245376 7.7459257 10.6769539 3.8319279 5.9099315 10.2980238 5.6917519 -0.9230305 11.2321755 1.0770379 12.8869096 12.2616065 7.2668652 10.0239473 9.3739572 10.5333954 3.0770379 3.4693520 NA 1.6620232 9.1471619 9.7696565 10.1207519 5.4168904 9.0047747 7.4345932 10.0770411 5.2063228 8.9427743 NA 10.5323683 4.2864968 3.9350259 10.1417838 4.8644189 8.7476972 9.8402535 10.5512539 10.1390871 5.2063228 14.2679460 2.5364757 10.2637743 NA 7.8649438 5.3808229 8.0018535 8.6990928 10.975642 6.143130 8.550747 12.478454 9.658242 10.622005 12.175567 7.735253 9.948946 10.728541 13.363454 8.631630 8.967305 10.393323 2.246955 7.980923 11.287408 10.989930 6.077040 9.225518 9.810904 8.546683 11.184954 9.413548 8.269334 10.004819 5.007779 NA 5.646897 7.929196 11.404594 11.183931 6.903589 8.756521 10.149174 9.373957 8.779214 10.669031 10.662942 10.397842 10.473646 8.524124 2.246955 9.509489 8.796772 9.943547 10.432943 5.246967 11.760694 9.821034 7.965784 14.519628 9.850180 10.195982 12.911018 11.702293 9.525157 4.983933 TCGA-EW-A1OW 58 0 NA 694 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 black or african american not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.33407416 4.98521350 7.16481946 11.11199457 NA 10.33581629 NA 9.31259439 11.12414303 9.25483447 10.01963576 7.92381118 9.22737551 10.37231540 8.33313522 9.37440333 8.22853012 11.26724726 9.98042238 4.33313746 9.48578222 11.15635079 13.18614768 10.43866961 10.05910999 10.70568940 5.31585602 10.30876757 0.52576822 1.94080572 8.07267500 12.03423536 12.07444168 7.41655097 11.99965513 12.03950791 9.87966227 6.14049033 3.89501173 8.18874510 9.01228009 8.47024848 8.36708271 5.16963643 -1.05919428 11.43842017 9.15998634 7.95483840 9.61501013 11.04148017 9.33313522 4.46438074 NA 14.84933403 11.09436982 -1.05919428 7.39202885 NA 5.16963643 9.86711376 10.40280871 10.09690091 8.74656168 9.52484080 9.86042606 2.74818211 11.37074755 10.02496178 3.11074742 7.67213677 2.74818211 6.75459893 15.46480848 8.54383224 11.49468706 11.31558559 9.59634856 1.52576822 NA 9.53980071 9.14538884 10.68144189 -0.05919428 6.51824714 6.88918512 11.28677738 10.31204988 5.55552783 7.28954586 5.07010162 8.88918512 11.92345492 1.52576822 13.21366625 5.77370892 7.29396450 11.72074232 13.31809612 12.59130864 7.93517094 11.59276643 11.80209860 11.13175049 10.60570952 4.84770633 7.85370690 11.78179238 9.20760446 2.40023734 10.44315242 9.96179781 0.94080572 4.13380187 9.53234014 8.85968107 9.52484080 9.59724269 15.37497361 10.55966206 9.65592189 7.11574388 0.94080572 11.61941792 9.35232885 12.48747115 12.25709933 10.54537101 9.63168873 8.06235111 10.41581147 0.1305300 0.9055600 1.7007000 -0.3012000 0.1265800 -0.6954000 -0.2386800 0.7698600 3.6569000 -0.1530900 -0.1530900 0.2395600 0.1435700 -0.6963900 0.0824980 0.0712690 0.0712690 0.1197800 0.1373400 -0.6283000 -0.6761700 0.1227200 0.0964020 0.0964020 0.1038300 -0.2629800 -0.2599700 -0.2599700 -0.0297000 -0.6789200 0.1305300 -0.2006000 -0.2883200 -0.6996600 -0.7071900 -0.6947600 -0.6947600 0.0373800 0.8124300 0.0062693 -0.6571300 0.8459600 -0.1727900 0.1442200 0.1442200 -0.6574100 -0.6421600 -0.6963900 -0.6963900 0.0824980 0.0835090 0.1519100 0.1373400 0.1373400 -0.6215700 -0.6761700 -0.6665900 0.1400100 0.0964020 0.0964020 -0.2570700 -0.6681700 -0.2599700 -0.0147580 0.0932070 -0.3284100 0.127 -0.569 0.000 0.000 0.152 0.152 -0.628 -0.676 0.123 0.118 0.118 0.000 0.000 0.979 0.399 -0.260 -0.260 0.135 0.963 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.700 -0.700 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.513 -0.657 -0.233 0.127 -0.569 0.000 0.000 0.152 0.152 -0.628 -0.676 0.123 0.118 0.118 0.000 0.000 0.979 0.399 -0.260 -0.260 0.135 0.963 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.700 -0.700 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.513 -0.657 -0.233 8.03884987 13.75334611 2.11073072 10.17083829 2.39629652 12.88250735 1.52576822 4.36708446 9.09056501 10.55644743 9.73928967 9.25936053 6.54814837 10.73604578 9.24687952 4.74817138 7.02828072 10.50639596 7.49540656 8.90081972 8.77342310 7.71230757 12.08945326 1.74816064 8.75299506 9.86042606 4.66873752 NA 10.91092367 3.89501173 12.84394648 12.59209377 8.92665981 10.21926728 10.96457213 9.26837053 5.52578074 3.11074742 -0.05919428 2.40023734 8.54258850 9.06881213 6.45651706 7.12072725 10.24899751 5.82346151 10.40893270 7.05975869 10.70734671 0.94080572 12.60781844 3.46438074 4.66873752 10.39240501 7.33399344 6.15027127 8.64990174 8.24915660 8.02828072 2.40023734 13.09135844 0.52576822 10.84130731 NA 9.67213677 3.98520895 8.20526054 6.64817636 12.59478244 8.25370096 7.55184282 11.99965513 9.19111623 11.44687740 5.16963643 10.27732437 9.15756370 10.93411005 13.12755108 11.19022760 9.14538884 8.59366264 -0.05919428 8.13064212 10.68691218 10.940113 6.440663 8.861171 9.878927 9.763389 9.829896 5.811183 6.017632 10.438670 10.353917 NA 9.973552 9.327402 12.840741 9.510673 8.012280 9.166025 8.916666 6.307141 10.096901 9.609703 11.545603 11.175037 10.350739 9.682285 5.432672 9.589975 7.807046 7.479977 10.312050 7.006907 10.059129 8.889185 7.525780 13.813300 9.768954 10.547686 12.927282 11.066877 8.727087 3.262749 TCGA-EW-A1OX 43 0 NA 911 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA NA mucinous carcinoma no 0 white hispanic or latino 117.51.0 NA NA 2 3 NA NA 1 4 3 5 NA NA 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 1.668684e-07 12.0617123 7.0300480 7.7679533 11.3664711 0.7679937 10.4054838 0.7679937 10.6623922 11.4616580 9.5085774 9.9183352 8.2934739 10.5805317 8.9651699 8.9553052 9.4491918 10.4924671 10.3529157 5.0898795 NA 9.7587664 9.9997744 15.2313340 6.5161460 9.0027706 11.1301711 -1.2320910 10.4847127 NA 1.3529280 5.5753093 13.0945232 13.2216098 9.3282860 12.4033313 13.8140968 8.6055814 7.1773438 5.3826638 3.0898879 8.0347401 8.7552174 4.7452320 13.5198634 NA 7.0943828 14.7022894 -1.2320910 9.9949373 10.5119461 4.8764777 9.6437027 0.3528715 14.4828518 4.7903185 3.6748448 6.3678655 NA 4.6008406 10.1419060 10.3032287 10.5476727 9.1309929 10.4787597 9.9865165 NA 11.6348458 10.2836532 6.6383186 7.5228404 NA 10.9904464 14.5809077 8.2267903 11.9869705 11.5265929 6.8920740 0.3528715 7.2993344 8.0063581 9.8326961 10.1926444 NA 4.1942210 7.8842975 10.7078997 11.4237076 4.4118126 0.3528715 2.8554117 10.8705852 11.8405884 5.8972356 14.1203761 6.4474337 7.3263738 11.2677992 6.6808419 12.8494367 7.7133968 10.4531400 11.0306354 10.8582642 11.3235011 4.8123493 8.6040035 11.6910950 11.7578799 -0.2320910 10.2212239 8.6957311 1.9378717 0.8486380 9.7566380 10.3153298 9.8540895 8.6778465 14.2689818 11.5462358 9.9138854 6.6197020 NA 16.0737033 7.2191646 10.9716071 10.2673009 10.1166815 9.2707852 8.2578013 10.9277017 -0.0128480 0.7313900 0.8679100 -0.0045532 -0.0026291 0.0179670 0.0161490 -0.0318450 0.0105670 0.0085677 0.0085677 0.0179670 -0.0110570 -0.0110570 0.0185260 1.6457000 -0.9852700 -0.0242600 -0.0084466 0.0276410 0.0065293 -0.0261640 -0.0742740 -0.0742740 3.6569000 -0.1061800 -0.1061800 -0.1059100 -0.0221920 -0.0908870 -0.0128480 -0.0067782 0.0079206 0.0179670 0.0179670 0.0161490 0.0161490 -0.0138120 0.0105670 0.0105670 -0.0191360 0.0015286 0.0076423 0.0143330 0.0143330 -0.0171130 -0.0171130 -0.0110570 -0.0110570 -0.0081593 -0.9446600 -0.0242600 -0.0084466 -0.0353090 0.0027776 -0.0105630 -0.0261640 -0.0170590 -0.0742740 -0.9669600 -0.0067596 -0.1061800 -0.1061800 -0.0221920 0.0202060 -0.0635660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.6986908 9.2140026 1.0899049 9.2856228 3.7679514 12.1793319 0.7679937 NA 8.4456729 5.8123468 NA 5.7791809 1.7679514 10.2284091 9.1288004 -0.2320910 4.8554167 10.4176586 6.6259338 10.8534257 9.6986536 7.6228220 10.8037834 -0.2320910 10.7246925 9.9865165 -0.2320910 NA 12.0835274 4.6748448 11.2730205 12.5107890 6.0717348 10.1044598 9.3397059 9.3071120 5.9075036 4.6008406 -0.2320910 4.6505980 8.4261649 9.0312226 9.6979514 0.7679937 8.0016688 6.9177003 10.8669723 6.5161460 10.7833683 NA 8.6853252 4.1602668 9.0206186 9.5975651 7.0899716 -0.2320910 7.6718354 5.8447698 9.4288406 NA 13.1807216 -0.2320910 10.7412919 NA 7.8686158 5.4403775 7.8790888 8.6688201 12.163487 4.767951 8.879089 12.403331 10.313401 10.459697 13.519863 13.428172 8.173095 11.089318 13.343020 9.590524 9.832696 8.839416 2.089871 8.600843 12.491294 11.2670518 7.1166819 8.3510359 9.3148479 7.5261768 10.4911534 1.3529280 9.5468518 6.5161460 7.0111277 -1.2320910 2.0898710 7.0860438 8.6197024 9.6582176 7.5261768 9.6498321 11.7805778 0.7679937 10.5476727 10.9243525 11.3479762 8.7480929 10.6421663 9.0323960 NA 7.9805955 4.2598073 -0.2320910 11.4237076 3.4118059 10.5603369 10.8705852 7.0533557 13.0394893 10.2051851 8.8998104 12.6048912 10.2355588 9.6868165 1.5753123 TCGA-EW-A1OY 63 0 NA 908 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma no 0 white hispanic or latino 117.51.0 NA NA 1 2 NA NA 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.19589e-06 3.059253e-07 12.30195694 2.95454996 5.95455694 11.20564488 NA 9.55149218 0.04767798 9.71655147 11.27978751 9.36054930 9.29559401 7.26683525 9.35030541 9.35827911 6.31445364 7.92724996 10.34973415 10.23810841 6.83556917 1.36960607 9.56730263 9.45067845 14.14516366 10.78491379 8.95905837 10.76619934 4.66237642 10.35941476 -0.95232202 2.21760298 6.78237580 10.12581729 12.34343536 8.46973135 13.12740120 13.11409204 9.43890992 6.99603390 3.95455927 7.52339964 8.71477784 10.43137078 6.52340043 12.72384391 2.04767798 9.99164641 13.79549228 4.53951866 9.25662009 11.37072119 7.03635057 5.58682478 2.95454996 14.65915555 9.05329085 2.50710959 7.79921038 NA 4.33306588 9.62509529 9.54551823 9.16919997 9.74637105 8.88687018 9.48125191 1.04767798 10.58245561 9.70409125 4.95455927 7.00766870 7.15095462 11.08177761 14.11080869 7.38671440 10.52137214 11.22383960 9.00911619 2.63264048 1.63264048 8.57122855 8.82574366 10.30328519 NA 4.17695302 7.78237580 10.32901694 10.47550303 5.17694903 4.69152300 4.29559080 9.00331636 11.78004589 3.04766053 13.59202720 6.14569783 8.14306326 11.60345383 12.15029831 12.11594089 8.30505441 10.42107536 10.68610233 10.61799651 10.72185871 4.63262884 8.53951944 12.42975003 11.68949242 1.04767798 10.46920538 10.07695372 NA 1.63264048 8.83393591 8.19741379 9.56435130 9.86224897 15.37940565 10.82574358 10.78237605 7.23749106 6.29559447 16.19137847 7.62131344 11.95980728 10.81004844 10.32437241 9.09206046 8.62698224 10.27750664 -0.331100 0.637000 0.623690 0.661240 0.069669 0.247950 -0.370870 -0.384930 -0.360680 -0.473530 0.216530 2.284400 1.009000 0.017963 0.603590 -0.403740 -0.428370 -0.423640 0.148750 -0.368610 0.730190 -0.361470 0.914600 0.212070 1.609500 0.184950 3.656900 -0.054420 1.394500 -0.359200 -0.331100 -0.290710 0.062835 -0.725170 0.263570 0.012516 0.012516 -0.384930 -0.360680 0.756240 -0.010646 0.070386 -1.292900 -0.415420 -0.415420 -0.415420 -0.415420 0.017963 0.017963 0.603590 -0.428370 -0.423640 -0.438970 -0.438970 -0.368610 0.092895 -0.077611 0.010156 -0.601190 0.212070 -0.230550 -0.374030 -0.478600 0.563120 -0.686510 -0.399190 0.000 0.000 0.604 -0.428 -0.275 0.149 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.500 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 0.000 0.000 0.604 -0.428 -0.275 0.149 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.500 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 7.7958591 12.8225564 7.6733755 9.6354439 2.0129977 10.3197130 1.3696061 NA 9.2473387 8.2644121 0.6326405 8.1110616 2.2176030 10.3232090 9.4926812 1.6326405 6.8224536 9.7350421 8.5868252 12.0204668 8.9362422 7.0588933 10.3757804 1.3696061 9.0490747 9.4812519 3.5712278 NA 11.1910497 1.0476780 13.1150168 12.5915441 7.1083624 10.0313726 8.5234000 10.0098395 4.2175952 5.3875176 NA 8.5653359 9.6250953 9.2350186 8.4442712 2.5071096 8.1750420 7.9724790 10.1743710 6.3875159 10.4739312 -0.9523220 11.8576355 2.6326405 3.8025551 9.8869096 7.1134328 5.5070969 9.8590412 6.9118521 7.4612944 0.6326405 14.2706877 NA 11.4046685 NA 9.0824655 4.6022549 8.2595545 8.7891335 11.142407 12.364796 8.515272 13.127401 9.326116 10.878578 12.723844 12.383615 8.579048 10.019928 12.326987 12.088127 8.825744 9.225086 NA 8.444271 11.401365 10.81378119 6.29559447 8.26198535 8.84045662 9.09751494 9.53408923 5.61752183 3.95455927 10.78491379 9.04060481 0.63264048 6.40521806 7.57627648 9.58682515 9.76962002 10.26925352 10.25833778 10.86544957 5.85502043 9.16919997 10.79753589 11.81647103 9.53651086 10.22321594 8.33075468 0.04767798 8.59839387 7.20945337 6.69152300 10.47550303 5.50709690 10.35941476 9.00331636 7.30990194 14.21794362 10.53801593 9.99895113 12.29411014 10.38026245 9.12046885 -0.95232202 TCGA-EW-A1OZ 56 0 NA 1229 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 117.51.0 NA NA 1 3 NA NA 1 3 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.056833e-06 1.946798e-07 12.8120388 4.9718654 6.8477752 11.4786151 NA 9.2156155 NA 9.5186758 10.8776994 8.6010624 10.2474790 6.9915479 9.5791151 9.6826347 7.1006960 8.9974011 9.6296067 9.4470650 6.6239429 5.0490339 10.4427819 10.7882520 13.5790745 9.9876334 8.8997418 10.5699799 4.8391131 9.3762122 -1.5357500 NA 8.0952488 10.6982901 12.6141361 7.1987809 17.0668211 12.9363815 9.1070256 6.3158198 3.8903397 6.1919929 7.9235028 8.7273405 7.2969612 12.6595975 -1.5357500 9.6850543 13.6994500 NA 10.1791841 10.9571764 7.8924317 7.4065860 2.5515406 13.7388143 8.5068526 0.0490731 9.2690091 NA 3.4182709 9.1088292 9.7944282 6.8986993 12.2115302 9.8072572 10.6374363 0.4640409 11.2367984 10.3142583 6.3344360 7.4725000 0.7860108 10.3528147 15.2775897 6.4851064 10.4784407 11.0808500 9.1294074 -0.5359591 3.9559265 6.3709628 8.6747428 10.3405884 0.0490731 6.0186609 6.8606761 9.3777090 11.0856655 6.0490339 5.6637431 5.3467158 9.4255212 11.7018790 6.4007087 13.6865268 4.3467158 6.8172178 11.3177709 13.5759814 12.6862626 6.7494739 10.7299795 10.3765867 9.8911277 10.1320700 4.7860003 9.6163562 11.9046811 12.1788536 NA 10.2168702 9.1097299 2.4640670 2.5540731 9.2609224 9.9614244 9.5732492 9.4484899 15.3024383 11.0513802 9.2657798 7.6112764 1.2714257 16.0683713 9.1302954 13.6471640 11.0810797 9.9669032 9.1817479 8.4780921 10.1210817 0.1101500 0.0552360 1.0309000 1.0638000 1.7457000 -0.3581200 0.0341810 0.7093500 0.0047171 0.7388200 0.7388200 0.7361500 0.6904500 3.3227000 -0.3812900 -0.3812900 -0.3812900 -0.0198800 0.0547290 -0.7676200 0.7414700 -0.3830800 0.5905300 3.6569000 1.8123000 -0.1673300 -0.1015200 -0.1015200 1.4121000 -0.8092800 -0.5771900 -0.0145750 0.0104910 -0.8013000 -0.3528800 0.0161820 0.0285490 0.7093500 0.0047171 0.0157940 0.5118100 0.5345800 -1.2330000 -0.8147900 0.0192900 0.0022858 -0.0802110 0.0651520 -0.4203000 -0.4698000 -0.3812900 -0.0198800 0.2739400 0.2739400 -0.7307300 -0.0362010 -0.3605000 -0.4014200 -1.2929000 -0.8397400 -0.4562200 -0.1673300 -0.1015200 -0.4752800 0.2727600 0.8779600 0.085 -0.358 -0.381 -0.381 0.000 0.000 -0.731 0.710 -0.383 0.313 -0.072 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.717 0.255 0.635 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.758 0.000 0.000 -0.197 0.085 -0.358 -0.381 -0.381 0.000 0.000 -0.731 0.710 -0.383 0.313 -0.072 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.717 0.255 0.635 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.758 0.000 0.000 -0.197 8.2487065 13.8703097 8.0167403 9.6495664 3.8584486 11.1424515 2.1644967 NA 8.1610391 8.0676979 -1.5357500 7.4231748 2.4640670 10.2367984 9.2977522 3.1645128 7.0071035 8.9326955 10.3095615 12.6603662 8.5592972 6.9438522 11.0516146 1.4640932 8.2794546 10.6374363 6.7540898 -1.5357500 12.5506224 1.7860108 13.1619078 11.3083849 7.4640711 9.2770509 8.6074546 10.1645111 7.4752989 1.4640932 -1.5357500 NA 9.3709620 9.4470650 10.5778136 4.0490382 8.2663457 9.3911087 10.2042739 6.3095618 10.2933978 NA 9.8177697 2.5515406 3.3709594 9.2866583 7.6930583 3.4640670 8.5568287 8.0970666 4.9718654 0.0490731 13.8954385 0.4640409 10.5699799 NA 8.9204258 3.5515283 7.2156155 7.2874390 12.012826 5.003229 8.656364 17.066821 9.122283 10.665276 12.659597 10.350911 8.584309 10.230600 12.857395 10.942335 8.674743 10.486439 1.049003 8.434177 11.401261 11.190715 6.830394 7.737867 9.487826 8.183357 10.860537 7.167975 4.218959 9.987633 5.284251 1.049003 8.047154 7.571550 11.612548 9.932695 8.325158 8.947887 10.291811 4.873464 6.898699 10.616039 10.874523 9.468994 10.758118 8.566047 -1.535750 9.188159 7.429192 4.939805 11.085666 7.452756 10.855315 9.425521 6.458425 13.965784 9.929128 10.042916 11.901173 11.292406 8.859606 1.271426 TCGA-EW-A1P0 55 0 NA 1251 breast stage iib t2 n1b mx 2-10-2014 female 2008 NA NA mixed histology (please specify) yes 1 white not hispanic or latino 117.51.0 NA NA 5 2 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.39057e-07 11.4771307 4.9038770 6.4671458 11.7806709 NA 10.6687013 0.4227712 9.7227235 11.9818108 10.1614077 9.7963427 8.4432693 9.1069167 8.6125770 6.8767085 8.7219604 10.6949934 9.8903581 6.1776408 2.5382402 10.7711117 8.2619562 13.8390662 11.0371555 10.1580264 11.0901597 5.0857178 10.7825020 NA 3.5926723 7.7295738 10.3140299 13.4429801 7.1997342 8.8698356 12.6323074 8.6451450 4.7685284 1.4227712 5.1045757 8.6273238 9.8957817 5.5792556 12.9860282 -0.1621375 8.7386567 14.3287035 -1.1622989 9.7869163 10.5716526 3.8821833 9.7817698 -0.1621375 14.1499777 10.5456149 3.9670764 7.3691716 NA 2.6451483 9.2598548 10.5788355 9.6563721 9.7766344 9.3346438 9.6403064 0.4227712 10.2258073 10.0761947 6.8321432 8.3175704 11.9918169 11.2974777 14.5326375 7.6785368 11.8575544 11.3092112 8.0374624 0.4227712 -0.1621375 9.1809758 9.2598548 10.3221094 -1.1622989 5.8601583 7.2386694 11.4332805 11.0484613 5.2301069 5.5520358 4.9875392 10.8549464 11.9897578 1.4227712 13.2547854 7.3336447 7.8349697 10.1266561 10.7307122 13.0464054 6.2724189 10.1843037 11.0530196 10.4770357 11.3478123 5.4227510 8.2471808 11.1223249 12.6356541 NA 9.9521830 10.2828048 0.8377818 0.8377818 9.7611175 10.6910995 9.8539018 9.7019761 14.6405335 10.0892724 10.6183297 8.3885366 1.6451483 15.4770035 4.5926783 11.5784140 10.7747959 10.4024159 8.6926584 7.9593233 11.1215121 1.00820000 1.21700000 0.62588000 0.00083195 0.00083195 0.00097064 0.21024000 -0.00595220 -0.75253000 1.84000000 1.77660000 1.80610000 -0.00235530 -0.00823070 -0.01050800 -0.01050800 -0.01050800 0.00221930 0.00221930 0.62388000 0.00000000 -0.76115000 -0.00429290 -0.00429290 -0.00429290 0.00541390 -0.01424200 0.00722170 0.62315000 -0.00512270 -0.00207840 0.64341000 0.00083195 0.04726800 0.68682000 0.23985000 0.23985000 -0.00595220 -0.75253000 -0.75253000 2.38690000 -0.77583000 -0.77013000 -0.00609040 -0.00609040 -0.00609040 -0.00609040 -0.00823070 -0.00823070 -0.01050800 -0.01050800 0.00221930 0.00221930 0.00221930 -0.00124730 0.00000000 2.37810000 -0.00553750 -0.00429290 -0.00429290 0.00138680 0.00541390 0.00722170 0.62315000 0.00013863 -0.01257600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.651 0.651 0.623 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.387 0.000 1.036 1.806 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.651 0.651 0.623 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.387 0.000 1.036 1.806 0.000 0.000 0.000 8.0472434 11.7303328 5.5520358 9.3104808 3.9252494 10.6022470 1.1596938 NA 9.2290336 7.5031261 -1.1622989 8.7341223 NA 9.6427276 9.2386694 0.8377818 8.4339797 10.3846845 6.9199395 9.7707428 10.0968740 7.7265329 9.3495426 2.6451483 9.2755421 9.6403064 3.0077158 NA 10.4404888 3.1597261 13.1336306 11.9159408 8.7476831 9.4367730 8.2301074 9.1653427 4.2301108 2.0076978 NA 7.8794491 8.7112340 8.7890745 9.6627487 3.3613473 4.0276141 7.5893343 10.5674107 7.0176993 9.6571707 NA 11.5468738 2.1597261 3.4227578 10.2977850 6.0853375 1.6451483 7.8406049 7.8462187 6.6643378 NA 13.9338462 1.1596938 10.5416935 NA 9.3074317 3.0857136 7.8093334 9.7491819 13.2232493 3.3613473 9.0998848 8.8698356 10.5532287 10.9427162 12.9860282 10.1272325 9.2869387 10.8374377 13.1009858 11.8913765 9.2598548 7.2343950 0.8377818 7.3846845 11.6832800 10.552894 7.648362 8.632206 8.461671 8.909252 10.134018 6.076196 6.481646 11.037156 5.085718 -1.162299 6.977342 6.842291 9.503126 9.512865 8.948926 9.065406 9.822920 5.141572 9.656372 10.030699 10.881842 9.370146 10.713539 9.390459 -1.162299 8.927399 8.102045 4.047242 11.048461 5.925252 10.579678 10.854946 7.305395 14.331176 10.237068 10.512424 12.780396 10.278659 9.923262 1.837782 TCGA-EW-A1P1 68 0 NA 1210 breast stage iiic t2 n3b mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 11 white hispanic or latino 120.48.0 NA NA 2 5 NA NA 3 3 2 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-08 11.15155437 10.23829821 6.36906859 10.95144726 2.19026718 10.13147618 0.02034218 10.02385843 11.28008370 8.30574257 9.58544257 7.74485401 8.79841769 10.51519599 5.97453620 8.84847679 9.20892932 10.28302259 9.02876914 5.76180651 10.16563576 11.36102508 12.57360975 9.76096456 9.35907680 10.23829821 6.15989151 10.18273177 1.82769710 1.82769710 10.39429312 13.96957442 12.25470883 8.71208398 12.24117220 11.62905730 11.11276724 6.90908423 4.10780502 7.12886457 9.49911000 8.50818063 8.68567634 11.02034044 1.34227027 11.40539391 10.06336771 5.32412293 9.37628604 10.35069713 10.17831889 4.10780502 NA 14.11362348 10.08306122 5.21016674 7.54390259 0.02034218 5.21016674 9.90603675 10.39102787 9.75927720 10.13017116 9.62118265 10.23648006 2.82769710 11.32269376 10.06131502 5.21016674 7.58258310 5.26826969 8.31266200 15.63895537 7.93439678 11.39456489 10.87715497 8.76180750 3.19026718 1.82769710 8.45705208 9.55172191 12.00760447 NA 3.26826969 7.22001259 10.28946713 11.06984869 9.06610023 7.00902463 5.52813369 10.33944797 11.68434323 0.60530468 13.58305988 4.66419837 8.31496112 12.31825978 12.97107859 12.78168391 7.61653047 10.27536900 10.97707961 10.45111187 11.22277039 4.74826263 8.33548996 11.47077848 10.14187391 NA 10.84768316 9.66599884 2.60530468 3.66419837 9.84370769 10.83492291 10.13473357 9.22001283 15.11682914 10.41587463 9.71295596 7.24915897 3.82769710 13.59475659 9.21386584 13.10174067 13.21870875 9.69453271 9.49708659 8.43396844 9.48475343 0.0123760 0.0123760 0.0123760 -0.0080244 -0.0080244 0.0197830 -0.0335410 -0.0234290 -0.0234290 0.0438650 0.0438650 0.1114000 0.0559430 -0.0423810 -0.0417020 -0.0417020 -0.0417020 0.0000000 0.0000000 -0.0468540 0.0693820 0.0203430 0.0076609 0.0076609 0.0076609 0.0085841 0.0085841 0.0365120 0.0043021 0.0123760 0.0123760 -0.0024889 -0.0080244 0.0197830 0.0197830 -0.0335410 -0.0335410 -0.0234290 -0.0234290 -0.0234290 0.0400440 0.0400440 0.0438650 -0.0210980 -0.0210980 -0.0210980 -0.0210980 -0.0423810 -0.0423810 -0.0417020 -0.0417020 0.0000000 0.0000000 0.0000000 -0.0468540 -0.0147410 0.0203430 -0.0051227 0.0076609 0.0076609 -0.0219210 0.0085841 0.0373590 0.0043021 0.0188030 -0.0317680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.9613880 13.5932775 7.2491590 10.2853694 3.6053047 10.5126943 1.0203422 3.6641984 8.5041564 8.9045109 0.6053047 9.7559895 4.7752297 10.1399300 9.5882966 1.3422703 11.1353841 9.9976204 9.5758882 8.9933203 9.4857947 7.5201865 12.5474509 3.8276971 8.2101648 10.2364801 7.2346594 NA 10.7651743 3.9745385 13.2786120 12.1538038 9.3478931 10.2455478 9.2101650 9.2999509 7.6127977 2.7207819 NA 3.2682697 7.6856767 9.4736110 7.9569784 6.8783219 8.4411008 5.8276946 9.9897270 6.3601904 9.9657843 1.6053047 11.5081805 3.8276971 4.9976221 9.6613987 6.2443429 2.1902672 10.2157127 9.0076045 5.2101667 5.0203422 13.8114524 2.8276971 10.6368893 NA 8.7516595 7.3822842 8.3264021 8.3997188 11.3169699 6.6423926 8.6551514 12.2411722 9.9444106 10.5987131 11.0203404 11.2818478 8.8131309 10.6967383 14.2774704 12.1872881 9.5517219 7.8689633 0.6053047 7.5081806 11.1111145 11.644907 5.190267 9.611863 7.771884 7.859544 9.846237 6.699821 7.128865 9.760965 7.200249 1.342270 7.827695 6.360636 12.164521 10.688339 8.545861 8.433968 11.453143 6.720781 9.759277 10.292387 11.405664 10.712084 10.463284 9.175159 3.479774 9.436431 8.960419 5.342270 11.069849 7.843708 11.334924 10.339448 7.559499 14.223459 10.085757 10.422820 13.054796 10.535054 9.472582 3.479774 TCGA-EW-A1P3 48 0 NA 1611 breast stage iia t2 n0 mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 117.51.0 NA NA 1 2 NA NA 1 3 3 4 NA NA 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.946798e-07 8.343418e-08 10.8096651 6.8779197 6.6566665 11.2208892 1.9641768 9.7879972 0.7417474 8.9150434 11.0244849 9.5132720 9.7520775 7.8847408 8.6486732 9.0256426 8.3952248 9.2322993 9.8042785 9.0516377 6.7788722 2.1568173 11.7181081 9.5799361 12.0157724 11.8009017 9.4594591 10.0823746 4.5143748 10.6566660 -0.8432151 2.6162401 7.5491378 11.8533530 13.0968584 7.4468393 13.7807587 12.6208553 9.1398138 7.1398133 3.7417798 7.8503069 8.7585910 9.5275075 7.6842970 13.2656712 1.1568496 10.6131745 14.7774122 3.6803806 9.7910412 10.4877370 7.5187641 5.3065685 0.1567849 13.4150681 8.7970652 2.3267387 7.3711389 NA 3.3267387 8.3928343 10.2389692 9.4035607 10.9348973 9.7464713 9.3759886 7.5956118 11.3094218 9.8363002 6.4787486 8.5956118 12.8258159 11.4088941 13.8696158 7.9851788 10.3084709 11.4983389 10.3993988 1.7417905 5.9381799 9.0875575 7.9283093 12.3087880 0.7417474 5.7861755 7.5788851 9.3027522 11.0912481 4.9117060 5.1791886 4.0637100 10.1554105 11.8940675 1.9641768 13.3621552 6.8710662 7.0993341 12.9253146 13.0150926 12.9905009 8.8042785 10.3946275 10.6945238 9.8380585 10.5830848 3.4047533 9.0318015 12.0210063 11.0535310 0.7417474 10.4645902 8.4142079 0.7417474 3.8578118 8.6764564 10.0934581 9.8310123 8.8096649 15.9914640 10.0318014 9.3928343 8.4537365 2.3267387 14.9073439 9.8555248 13.3928343 11.2359715 9.8441957 9.9601440 8.0816326 10.5409077 -0.11307000 0.85584000 0.86302000 0.03727300 0.03727300 -0.02406000 0.00171880 -0.00797010 -0.70429000 -0.11883000 0.12060000 0.16436000 0.00137450 0.00137450 -0.00146990 -0.00146990 -0.00146990 -0.01045400 -0.01045400 -0.17798000 0.50534000 0.01704000 0.50706000 0.50706000 0.45639000 0.01690000 0.01690000 0.00505160 0.03885300 -0.11307000 -0.11307000 -0.02207800 0.03727300 -0.02406000 -0.02406000 0.00171880 0.00074782 -0.00797010 -0.02406000 -0.02104400 0.75631000 0.68578000 -0.11883000 -0.55311000 -0.55311000 -0.55311000 -0.52794000 0.00875180 0.02474400 -0.00216250 -0.00146990 -0.01045400 -0.01045400 0.01676000 -0.17798000 0.51497000 0.01704000 -0.65832000 -0.65208000 0.50706000 -0.11804000 0.01690000 0.00505160 0.02542000 0.07921600 -0.67936000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.032 -0.658 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.743 0.000 0.000 0.000 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 -0.119 0.002 -0.553 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.032 -0.658 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.743 0.000 0.000 0.000 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 -0.119 0.002 -0.553 -0.553 0.000 8.5491374 12.1993345 5.6162518 9.6213658 3.2003474 10.7394325 2.4787389 NA 9.0816326 8.8676266 NA 7.3860237 3.4047533 10.6330600 9.3065673 5.4047465 7.9928704 9.0007412 10.0622071 12.0025062 9.4729093 7.4922105 10.9758016 3.1568173 8.0210060 9.3759886 4.5830858 NA 10.9825740 2.9641768 13.3396800 12.3784072 8.0085692 9.7219222 9.2012143 9.7427216 3.4047533 1.7417905 0.7417474 8.7171531 8.8898355 10.1412386 9.5011161 4.2442858 8.8025506 7.8078720 9.7632253 7.0210066 9.8476911 -0.8432151 9.6244257 3.0637100 4.5491393 10.4278395 7.8056807 4.7715317 9.1511736 6.9833687 6.8150310 -0.8432151 14.2147695 -0.8432151 9.8078718 0.1567849 9.5512828 5.8150323 8.1455047 8.1847261 14.069875 6.296371 8.886441 13.780759 10.177800 11.200189 13.265671 11.819043 9.282699 10.116822 13.636727 9.759519 7.928309 9.446839 1.478765 7.296371 11.942068 10.3753833 6.5576996 9.1497585 8.4047478 8.6764564 9.4576989 6.2963711 6.8915298 11.8009017 6.0148016 0.1567849 8.6862508 6.6822629 11.3518847 10.0294950 9.0333371 9.8015777 9.7436599 5.0637100 9.4035607 10.6182996 10.8834640 9.8641792 9.9398184 7.7152406 NA 9.0650175 6.4643399 5.8006773 11.0912481 6.2757614 10.1847261 10.1554105 6.3267459 13.9098279 10.2369714 10.6446602 12.6935530 10.8585597 9.2349709 2.4787389 TCGA-EW-A1P4 43 0 NA 907 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA medullary carcinoma no 0 white hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.422302e-06 3.122126e-07 11.6069651 3.1877044 6.2026567 11.5992181 NA 9.4012164 NA 9.1905223 11.6197270 7.6822292 9.2054436 6.5627461 8.9832057 10.3613842 6.3971612 9.5985119 9.7467656 11.2236518 8.5305226 7.6848938 9.4669307 10.7626160 12.5938236 10.4088914 9.3963479 10.3787664 6.6027449 10.3009936 -0.3972581 -0.3972581 7.9842874 12.3779434 12.8449512 8.9842877 11.5505642 10.7246019 12.2517762 5.4607262 0.6027419 8.2393694 8.8194906 7.3709289 11.4443090 5.7925691 NA 12.4563466 9.1640325 6.4356353 9.1184446 9.4769576 6.4101002 7.0415365 2.3031962 16.9233488 13.1801410 2.4100968 6.6361678 NA 4.3031816 8.6742071 10.4447021 8.8800319 9.4387950 9.7975015 10.5404863 2.3031962 10.6961623 10.6862240 4.6471360 8.0331972 -1.3970681 8.0498279 14.8377491 7.6450603 10.7845181 10.6471387 11.3323654 2.7726669 0.1877677 8.3238438 9.5764420 9.6948410 NA 3.7320304 6.6580272 10.6898760 10.7050485 6.5569413 7.5511122 7.9536837 8.5216079 12.2385761 1.4101240 13.3686005 2.1877044 6.4544934 11.4413577 11.6097719 13.6505928 7.3939078 11.8736239 11.9921071 11.0666623 11.0626885 4.3306660 8.3922783 11.4846233 7.9042408 0.9247080 9.7581954 9.4990771 1.4101240 5.3446155 9.5081317 12.1313209 10.2773783 10.0100125 14.7598744 11.1592507 9.3775318 6.3031853 4.3031816 12.2398223 9.2475022 12.1009706 11.9018095 9.7132279 10.1668942 7.4197285 9.7362144 -0.0234290 0.0077783 0.0211830 -0.3302500 0.4434200 0.2435900 1.2905000 0.3780800 0.2777400 -0.0145030 0.0068044 0.6993300 -0.0110600 0.6542400 -0.0494020 -0.3222800 -0.3222800 0.3378800 -0.3614700 -0.0858550 -0.3517400 0.3629700 -0.3350300 -0.3221700 0.9793500 0.3312600 0.3312600 0.3438800 -0.2469100 0.0550880 -0.0234290 -0.0103480 -0.3562400 -0.3553700 -0.4214500 -0.3715500 -0.3666900 -0.7469900 0.9420100 0.2984300 0.6978300 0.0000000 -0.0608830 -0.3117800 -0.3117800 0.2704800 -0.3256500 -0.3262300 -0.3262300 0.0095883 -0.3450400 0.3378800 -0.3346800 -0.3346800 -0.0024938 -0.3405600 -0.3541900 0.5700600 -0.3350300 -0.3221700 0.8687100 -0.3336400 0.3438800 -0.3382500 0.2946900 -0.3377900 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.914 0.000 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.914 0.000 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 8.565641 13.265469 5.141903 8.855410 2.850679 11.120906 1.924670 2.303196 8.418128 9.412513 3.126312 8.720297 5.344211 11.142146 9.592139 2.995068 6.684893 10.819187 10.182532 9.772670 8.550747 6.855410 11.973296 2.509645 8.080503 10.540486 1.772688 NA 10.187707 5.732028 12.514230 12.699460 7.299712 9.677555 9.313551 10.536804 3.812200 3.062174 -1.397068 2.062191 9.106570 9.624419 6.003625 0.924708 10.701586 7.285739 9.706688 4.246598 9.961396 NA 11.398176 4.062174 3.062174 9.538072 7.969045 5.580025 8.330665 8.275170 7.545260 3.303182 13.134187 0.924708 10.088071 NA 9.671523 3.062174 8.435635 7.390647 12.942931 9.256485 9.323844 11.550564 9.920722 10.990493 5.792569 11.452736 8.325552 11.262518 13.053763 11.882210 9.576442 7.988607 1.187704 8.515634 9.678892 11.2497533 2.3031962 8.5656406 8.3458962 6.7895023 9.8223428 8.1438413 5.4229226 10.4088914 10.1125197 NA 9.6587049 9.6143983 12.9524406 10.1164722 7.7268659 9.1905223 9.2698563 7.0744198 8.8800319 9.9286122 11.9009504 11.4413577 10.2017276 9.6768862 NA 9.3825131 13.1381829 7.0078862 10.7050485 6.7216857 9.8979397 8.5216079 8.1936683 13.7034481 10.7112691 10.8574781 12.8326149 11.2671919 8.4213268 0.1877677 TCGA-EW-A1P5 77 0 NA 703 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 3 white not hispanic or latino 117.51.0 NA NA 1 2 NA NA 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 1.39057e-07 12.3748020 2.9286546 7.4584698 10.8848802 0.1916890 10.3405839 NA 10.3153740 11.8079261 12.7771157 9.9024900 8.0434325 8.4801653 9.0773800 8.2879593 9.9615215 9.7501043 10.3431231 6.6620032 2.8546540 10.2769348 9.4003244 14.3926333 11.2910314 9.3632773 11.2444781 5.7665925 9.3481881 -1.3932735 -0.3932735 7.4739995 11.5659986 12.6828686 10.4689710 12.1693213 12.3559620 9.1954357 6.3815083 4.3071589 5.8546490 7.9510171 8.5030533 7.1651422 12.7585305 0.9286546 10.4681958 13.8409398 3.8921190 9.7429561 10.0641020 7.0579322 6.5374592 NA 15.4747870 9.3226831 0.6067265 7.7891156 -1.3932735 2.6067265 9.4870699 10.3002081 11.3467126 11.0356047 9.6081293 9.7100089 1.4140814 11.3422771 10.1110436 8.1555428 8.6207414 1.7766515 10.5601901 14.3199196 7.9786064 11.3073776 11.2729451 8.9642730 0.9286546 5.0661538 8.6888703 8.9958146 12.9992398 NA 3.0661581 7.9947381 10.1775256 10.9858286 10.4241045 6.9990383 4.8921238 10.1115401 11.6877051 2.9990439 13.2546292 7.4678077 6.6010740 11.9109298 12.1291800 12.5778155 8.4300883 11.0374350 10.7669077 10.5543909 11.0615344 5.2360793 8.8137353 11.1090557 8.6822004 0.1916890 10.8210403 9.0671770 1.1916890 1.1747260 9.0308875 10.1075630 8.5374584 10.0118626 15.5891131 10.0738172 9.5022964 8.2756059 0.1916890 15.7279612 10.0615344 12.7571031 10.7539261 10.5038102 9.6707902 8.5433590 10.2453516 -0.1703100 -0.1703100 0.6730700 -0.1833600 0.2729500 -0.1866000 0.6186100 -0.1706000 -0.1694200 0.2325600 0.2325600 0.2354400 -0.5851000 -0.5851000 0.2279200 0.2334500 0.2334500 -0.1742400 0.2242400 -0.6511700 0.0071489 0.5516500 -0.6375500 0.2058000 0.2058000 0.0000000 0.0000000 0.0000000 0.2515100 -0.1703100 -0.1703100 -0.1612800 -0.1833600 -0.1866000 -0.1866000 0.6222400 0.6222400 -0.1672600 -0.1706000 -0.1694200 0.2267200 0.2163700 0.2325600 -0.1671400 -0.1671400 -0.1671400 -0.1671400 -0.5851000 -0.5573700 0.2279200 -0.6518300 -0.1742400 0.2242400 0.2242400 -0.6181500 0.0071489 0.5666700 -0.6389700 -0.6375500 0.2058000 0.2632600 0.0000000 0.0000000 0.2560500 0.2379800 -0.6286500 -0.585 -0.585 0.233 0.233 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.211 -0.585 -0.585 0.233 0.233 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.211 8.1536154 13.1596303 5.8828460 10.1555431 2.8546540 10.8558346 0.6067265 -0.3932735 8.6277009 8.0599917 -1.3932735 6.1988045 1.1916890 10.5422545 9.3045574 2.6941893 7.9353961 8.7165516 9.4631467 10.1841500 10.0318006 8.0371735 9.8834271 4.0661495 8.5536274 9.7100089 1.7766515 NA 10.8310243 7.1419967 11.5989513 12.3764557 7.6235296 9.7596397 12.2260241 9.5818525 3.2505827 0.9286546 0.6067265 2.9990439 8.6249212 10.5964703 8.2505775 -0.3932735 8.5708454 5.1613113 9.4747719 6.1841494 9.5667231 NA 11.2128950 3.8921190 3.0661581 9.8387402 6.6887105 2.6067265 10.9127828 7.6179486 5.1145170 3.3616140 13.3679087 -0.3932735 11.5538101 NA 7.9059291 3.7766409 8.1005767 8.8112922 13.945181 5.489363 8.777898 12.169321 9.736648 11.011330 12.758530 12.428694 9.782271 10.557641 12.712793 9.294097 8.995815 10.345658 3.414081 7.078396 11.208492 10.9971588 8.1164963 8.9499069 8.8932788 8.9398765 9.9601491 7.7741393 5.6179479 11.2910314 7.7766462 -0.3932735 7.5982431 7.2266106 10.1732509 9.3320874 6.8063937 9.3303820 12.3903333 4.9817613 11.3467126 10.4759294 11.1610701 9.5739474 10.6259643 8.9173339 NA 9.1646443 10.9047121 3.1302884 10.9858286 7.3106246 10.3456578 10.1115401 7.5376952 12.8846623 10.6572500 9.9127828 12.9967557 10.0470713 8.6701162 1.7766515 TCGA-EW-A1P6 64 0 NA 562 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 2 white hispanic or latino 117.51.0 NA NA 2 2 NA NA 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 5.562279e-08 10.74046240 6.34859184 7.51225692 11.60634631 0.08174865 10.21623088 NA 9.62773432 11.71275422 9.41384114 9.45140195 8.07332647 7.83669232 8.99169757 6.65166022 8.65734382 10.59503868 8.91469457 6.35792846 0.66675659 10.12140919 8.79948109 12.42471266 10.62386915 9.34507387 10.22837331 5.08180403 10.48854112 NA 6.10417309 7.75423012 10.46280673 12.59577888 6.80972569 12.63471382 13.00038838 9.04180642 6.08180403 2.54124223 8.61318611 8.21879570 8.19814837 7.69651414 12.98361430 5.78224342 9.18771307 13.45528154 6.16926762 9.52153154 12.16262213 6.33919263 4.86316537 -0.91811503 12.66962314 9.02871086 -0.91811503 9.00958260 NA 5.08180403 9.59157957 9.88996446 10.26667997 10.56006863 10.07615809 8.96291856 2.25171909 11.29064862 9.79174994 7.36720680 7.32497887 0.08174865 12.61768746 14.06140843 7.44891334 11.54762609 10.70705684 8.45031100 2.78224080 NA 8.23662272 9.02431913 11.17092402 NA 6.07049023 7.16926762 10.21494682 10.66911333 4.16926762 5.25173045 3.93978135 10.18246698 11.61902301 NA 13.17340528 6.78224473 7.32973177 12.32006006 13.12038071 12.81238088 7.44374836 10.86357411 11.02395252 10.43623036 10.84086052 4.36721029 9.16661302 11.60414093 11.34712664 -0.91811503 10.01844251 10.50439505 1.08181681 4.23317482 9.17191710 11.04758889 10.73150988 8.94289155 14.69014608 10.11729102 11.41970521 8.11797809 6.24167623 15.30832970 9.37297538 12.09617384 12.06051508 9.98191671 9.60144081 8.30821660 9.77424578 0.01922300 0.01922300 -0.00609040 -0.01216200 -0.01216200 -0.03231400 -0.01312700 0.30489000 0.28791000 -0.71942000 2.60630000 2.74080000 0.01433000 0.00853190 0.00000000 0.00000000 0.00000000 0.04145800 -0.03124000 -0.01566700 0.01181800 0.03580600 0.04386500 0.04386500 0.04386500 0.06471700 0.05533600 0.05533600 0.13376000 0.01922300 0.01922300 -0.01078400 -0.01216200 -0.00733390 -0.03231400 -0.01312700 -0.01312700 0.30489000 0.28791000 0.28791000 -0.00678130 -0.01050800 -0.71942000 0.00736090 0.00736090 0.00736090 0.00736090 0.00853190 0.00853190 0.00000000 0.00000000 0.04145800 0.00055459 0.00055459 -0.01532900 0.01181800 0.02134600 -0.68131000 0.04386500 0.04386500 0.00736090 0.12550000 0.05533600 0.14221000 0.01656500 -0.66836000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 8.84501702 12.74402792 8.57965649 9.12619880 3.00875578 10.28942909 2.25171909 NA 8.37412616 7.88270479 0.08174865 8.36845495 0.08174865 10.32913874 9.30701201 0.66675659 8.81989678 9.17059284 10.76260362 10.82158522 8.67396269 7.67051958 9.23535658 1.08181681 10.32378775 8.96291856 8.20333821 NA 10.32140311 1.88916200 12.91528771 12.21028234 6.67426149 10.01991398 7.11522785 9.38444359 2.25171909 0.66675659 NA 10.08883182 10.04397765 9.44374836 9.83752670 1.08181681 8.25313175 6.60536691 10.78700500 5.97662255 9.42610055 -0.91811503 11.36547176 1.88916200 3.25173424 9.85687990 6.96420338 6.65923386 9.11522759 8.68171736 9.10000470 2.08181681 13.84698709 0.08174865 10.09791650 NA 9.08321284 4.08180829 8.13165327 9.33801341 12.700421 4.474124 8.863164 12.634714 10.161956 10.212375 12.983614 12.806851 9.338013 10.724759 12.120724 11.113850 9.024319 8.530953 2.541242 7.381012 11.521635 10.991323 6.895586 9.080395 9.745363 8.916276 10.569725 6.533015 7.863164 10.623869 7.047589 2.782241 4.725659 6.940408 10.820741 10.115228 9.611801 8.909941 10.955249 6.761285 10.266680 10.396388 11.800337 9.731959 10.416078 9.154607 NA 9.235990 7.617080 7.047589 10.669113 7.628699 10.396388 10.182467 7.315424 13.900886 10.280863 10.323192 12.246083 10.816091 9.871338 2.251719 TCGA-EW-A1P7 59 0 NA 915 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 117.51.0 NA NA 2 5 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 5.562279e-08 11.4650494 9.0447922 6.4822675 10.9699582 1.3123167 10.8065309 NA 9.9416987 11.6577473 10.1934560 9.2934335 8.2587610 8.8411218 9.9233669 7.4243469 9.5515427 9.2282215 10.3653628 9.3793281 6.6282458 11.0711205 11.7046594 12.2810088 11.1690269 10.3671724 10.6046637 9.0277321 10.5021666 5.4955641 1.7273977 10.3282216 13.1657166 13.1349793 7.4278190 13.2106915 11.1202336 9.9543938 6.5217951 3.8148375 6.3048085 9.1067579 9.0627699 8.1765282 8.0493078 0.7273542 12.1068933 9.5938858 7.3820153 9.7281894 10.0821799 8.7003593 4.8148426 NA 15.1478272 13.1686852 3.3123457 9.0650014 -1.2726458 6.2111952 10.2991322 10.2991322 9.3494314 10.6935244 10.3775337 11.1156660 3.5347340 10.4646269 10.7323022 6.6815758 7.5634297 5.8148426 9.4015718 15.6458352 8.3965127 11.1638309 10.5814688 9.4847695 4.2192305 -1.2726458 9.4705310 9.4578497 11.0374242 NA 4.2192305 7.1578320 11.1515458 10.7142882 7.0357185 8.0738931 5.9172050 9.5266612 11.3730380 1.0492822 13.3540012 5.4955641 7.5152819 11.9348515 12.0613734 13.1749794 7.7497474 10.7590807 10.6992823 10.4715785 11.1465497 5.1868095 8.2450487 11.6835742 9.3448469 0.3123167 10.8979306 8.8345965 2.5347340 3.9722699 10.2790878 10.7153541 10.7840172 9.4544490 15.4074918 10.2602225 9.4663161 7.8540842 3.8566670 12.9016811 7.8306673 13.5905011 12.5155881 9.8840946 9.8739482 8.3658154 10.1003208 0.0811770 -0.0213380 0.0982700 0.0105110 0.0820430 -0.0707870 -0.0553640 0.0912030 0.1143300 0.0391950 0.0391950 0.0391950 -0.0654470 -0.0654470 0.1112500 0.0341130 0.0341130 0.0831980 -0.0026591 0.3225300 -0.0378980 -0.0646430 -0.0454990 -0.0454990 -0.0454990 0.0414580 0.0414580 -0.0566230 0.0167050 0.0535210 0.0811770 -0.0015243 0.0105110 -0.0689310 -0.0707870 -0.0553640 -0.0553640 0.0912030 0.1143300 -0.0456180 -0.0540160 -0.0721470 0.0391950 0.0252500 0.0252500 0.0252500 0.0252500 -0.0654470 -0.0718730 0.1112500 0.0341130 0.0831980 -0.0026591 0.0265140 -0.1420700 -0.0378980 -0.0646430 -0.0677410 -0.0454990 -0.0454990 -0.0590000 0.0414580 0.0414580 0.0167050 -0.0667880 0.0907200 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.439047 13.816996 4.427821 10.078871 7.856920 11.780796 8.221235 2.312346 8.401572 9.246033 5.534734 9.166265 5.102419 9.583805 9.616123 2.049317 11.417596 9.473894 8.100244 8.420866 9.286470 7.672823 12.468530 3.936836 8.956198 11.115666 4.119696 -1.272646 11.193456 4.312338 13.288608 11.825741 8.485603 10.632767 9.995337 8.626737 4.119696 1.727398 1.312317 2.534734 8.779947 10.042529 8.487268 7.822777 10.213848 6.003503 9.793469 5.825412 9.635772 1.049282 12.263627 4.455301 4.727381 9.229207 6.516130 9.673555 10.221235 9.160965 10.531914 2.897299 13.779650 1.727398 10.676112 NA 9.641765 5.877126 7.485603 8.492251 13.789505 7.026588 8.082731 13.210692 11.266538 10.460819 8.049308 10.998551 9.447624 11.376411 13.647872 10.702869 9.457850 8.113242 1.312317 7.566583 10.729843 10.977086 5.186810 9.428686 8.985946 7.727379 9.652563 10.031731 8.914732 11.169027 10.078871 -1.272646 8.147340 6.963777 13.201592 11.512423 7.904799 9.170323 10.271378 9.405980 9.349431 10.311872 11.143649 10.779268 10.564613 8.990649 NA 9.670422 8.584085 10.942002 10.714288 7.304809 11.265813 9.526661 7.600824 14.550896 9.879030 10.813516 11.694966 11.193201 9.364004 3.250946 TCGA-EW-A1P8 58 1 239 NA breast stage iiic t2 n3b m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 14 white not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.674735e-07 2.503025e-07 11.8587497 5.2612036 5.8860575 11.7361776 -1.4803575 8.6005522 NA 8.8573568 10.8896048 8.3714839 9.1084494 7.2132219 9.1187179 9.9929332 6.6282589 8.7255282 9.4356142 10.2480806 9.0791119 4.9954664 9.7316232 10.5898558 12.6680526 10.8419447 10.1824033 10.2442487 5.9459986 10.6454712 NA 1.6896570 8.1196477 10.6486958 12.7973855 6.1344448 11.7043003 11.4190918 11.2521143 7.3683580 4.2476541 8.7095595 8.5517805 8.7389033 8.7830041 4.5641281 1.3271125 12.0015343 11.7349645 10.7101769 9.2079851 11.1314514 8.2270941 3.7676654 -0.4803575 15.0855453 9.4615161 2.1047057 9.6438562 3.2201752 4.1344427 9.3597258 11.4719301 9.4046686 9.9657843 9.5972183 9.8022441 1.3271125 10.7661786 10.6624801 4.0433008 7.1850707 4.1921626 6.4504723 14.6358351 9.5201857 10.3609061 9.9724909 10.7521558 4.0433008 NA 9.0115879 9.2044836 9.9034392 NA 4.3010974 7.5448748 10.8297796 8.5140883 4.6896626 7.1527300 6.9750627 9.4326242 12.0878097 1.6896570 13.2789989 3.8051377 7.0393709 11.7126441 13.2653042 12.2325843 7.1121924 11.2438223 10.4905598 10.2289436 10.5861605 3.8772829 8.2339805 11.7462976 6.3010937 1.1046721 10.7844707 9.6236783 1.3271125 3.4009068 9.1215055 12.1557930 9.7818297 9.0344490 14.6752251 10.0150902 9.2000943 6.2812865 0.8416511 11.2227733 8.9227470 12.4866909 12.8289981 10.4786500 9.8022441 7.7169518 11.1578563 1.61300 3.30150 0.37216 -0.40042 0.40427 -0.38929 0.48940 0.42198 0.39330 -0.39819 1.62780 0.38105 0.39031 0.45547 1.14620 0.41705 0.41705 1.48460 -0.38862 -0.39853 -0.38750 -0.39686 -0.35350 -0.35350 -0.35350 -0.32832 0.41999 1.14160 -0.38653 -0.36397 0.40244 -0.39564 -0.39297 -0.40274 -0.38917 -0.39689 -0.39689 0.42198 0.39330 0.38915 0.41095 0.40611 -0.40517 0.40561 -0.38728 -0.38728 -0.34400 -0.39096 -0.40031 -0.39352 0.41705 1.48460 -0.38862 -0.40230 -0.38817 -0.38750 -0.38100 -0.38347 -0.35350 -0.35350 -0.42141 -0.32832 0.41999 -0.39375 3.65690 -0.37065 -0.001 -0.391 -0.394 0.024 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 -0.328 0.092 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 -0.001 -0.391 -0.394 0.024 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 -0.328 0.092 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 8.3699218 13.3515369 3.6072001 9.6758179 2.9120558 12.5876734 1.1046721 4.1046973 9.6045432 9.7611222 6.4681027 7.9492460 6.4739314 10.2775415 8.8783860 3.2746195 6.8051377 11.2309716 6.0511154 9.7151071 8.7741730 7.5911969 12.6478098 4.4266271 6.9626786 9.8022441 2.4266136 NA 10.5229014 -0.4803575 13.4592223 12.2570879 7.4115186 9.7794781 9.9254082 10.0976357 3.8416612 2.1047057 -1.4803575 NA 8.4797366 9.4326242 7.8074470 4.3010974 9.8809988 6.7533545 9.9163396 4.2476541 9.3660087 6.3076380 12.1241723 2.3270837 3.3270837 10.1902317 7.9244723 4.3526244 8.8062928 8.6983998 6.3076380 0.5197432 13.3609061 1.1046721 10.8060039 NA 9.2729516 1.9791839 8.6373780 7.8280736 12.632419 8.910978 7.636079 11.704300 9.521847 11.137891 4.564128 6.612493 9.548629 11.760973 14.340313 12.249249 9.204484 7.762909 1.104672 7.623023 9.975062 11.2533858 1.9791839 9.2079851 8.7144918 9.0255466 9.9954075 7.7291884 4.2476541 10.8419447 9.1093859 1.8416511 8.7449425 8.4441316 12.2667740 11.1781695 7.6151315 8.4326242 7.8794846 5.7958604 9.4046686 10.0481890 11.7446410 10.9644910 10.4103792 9.0791119 0.8416511 11.0983340 5.4714866 6.4206020 8.5140883 4.9626786 10.6943267 9.4326242 7.8706742 14.4375032 9.9755757 10.7596317 12.4666412 11.6993330 8.8629206 4.5641281 TCGA-EW-A1PA 59 0 NA 575 breast stage iib t2 n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 117.51.0 NA NA 4 3 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 0 0 0 0 0 6.396621e-07 2.503025e-07 11.7634940 6.7335550 6.8818065 10.5206948 -1.1181005 10.5813788 NA 9.3915815 12.4284598 8.5612864 10.2508584 6.5612864 9.4092834 9.8396340 8.1058080 9.3984915 11.0517314 10.4296649 7.6198986 3.9261987 11.5802940 9.2869479 14.4536775 10.7671215 8.8747447 10.9027864 6.2127230 10.0894309 0.4667576 1.2037650 8.2014785 12.2813514 12.7680746 5.9903309 12.1278047 12.7978725 9.9745636 5.8006696 1.6891650 7.2305345 8.8345475 8.2037346 7.9955484 13.1370563 NA 9.7272965 14.2013374 3.2037336 9.2404577 11.4335147 7.8184441 9.1082186 2.6891650 13.0508796 7.8986147 2.0517201 8.0033397 NA 5.3896012 10.5604066 9.4946750 9.6466780 10.1503485 10.3955340 9.5120736 0.8818212 11.9865690 10.5783393 6.6366942 6.9316547 3.8360049 11.9133353 14.2298429 9.2101560 11.2546715 10.5546736 8.0888206 2.0517201 5.2216567 7.9745637 9.5056879 10.3169558 NA 3.7397833 7.3575397 9.7162774 10.5066018 4.8125444 5.9041734 4.5822489 10.0666818 11.5615064 5.3896012 13.4789278 6.4965167 7.8789858 12.0047961 12.4320722 12.9184093 8.2459410 9.2644304 11.2765370 10.6169393 11.3994758 5.4363951 8.1033938 12.1959648 12.1169231 NA 10.4568729 8.9248336 1.8818212 3.5894399 9.1118269 9.4209653 9.7720707 10.5391249 15.0466937 11.5551155 9.2503129 8.2171968 3.8818016 15.3008778 9.7999243 12.4758977 11.2743922 10.1695188 9.5229550 8.6680762 10.2099989 0.0100060 0.0100060 0.0100060 -0.0018014 0.0037465 0.0157270 -0.0201380 0.0048579 0.0283410 3.6569000 1.4895000 0.0068044 0.0061090 -0.6347200 0.0000000 0.6166100 0.6166100 -0.0027707 0.0175440 -0.6800800 0.0115390 -0.0053992 -0.6487400 -0.6487400 -0.0195890 -0.0305400 -0.0305400 1.6444000 3.6569000 -0.0211550 0.0100060 0.0059700 -0.0018014 0.0157270 0.0157270 -0.6396300 -0.6396300 0.0048579 0.0182780 -0.0635020 0.5786200 0.6099100 -0.6549100 -0.6402900 -0.9491200 -0.6120100 -0.0121620 -0.6347200 -0.0059522 -0.6658700 -0.6475300 0.0073998 0.0175440 -0.0182160 -0.6358700 0.0115390 -0.0053992 -0.0121620 -0.6487400 -0.6487400 -0.6680900 -0.0305400 -0.6344300 -0.0490190 0.0203430 -0.6562200 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 8.9785217 11.6895638 7.0961258 9.7296467 4.1312520 11.0404161 3.2741275 0.4667576 8.7766242 9.0391535 NA 7.7703672 0.8818212 10.7210102 9.6266403 3.4667707 9.3984915 9.5986259 9.4845053 11.4967462 9.5999796 9.3391873 10.7560193 1.8818212 9.6020508 9.5120736 4.6366942 1.2037650 10.7027831 3.4053661 11.7726406 12.3161740 7.4965159 10.2393584 8.3896012 9.0059277 3.6366942 1.2037650 0.8818212 0.8818212 8.9572855 9.3017666 10.1154261 5.1106263 9.6950586 6.1009755 10.1712490 6.0110886 10.2906669 NA 9.6639857 2.3412457 5.0912598 10.2265295 8.9429077 7.2127230 9.4383124 8.1787226 8.3247499 NA 13.5125286 0.4667576 11.1237896 NA 8.3185180 5.6762223 7.6631660 7.8447026 14.6008617 5.8930345 8.8605169 12.1278047 9.4726648 10.0046344 13.1370563 12.1480073 9.7860798 10.8572962 12.3414942 10.4083056 9.5056879 7.5400180 -0.1182571 7.6433577 13.3380325 11.3636059 7.0765634 8.9850942 10.1929871 8.2590168 10.7702719 6.5471429 9.4854327 10.7671215 5.6232728 NA 6.0315540 8.9131766 11.2149618 10.7598573 8.9505848 8.7490850 10.4229030 7.2261019 9.6466780 10.6182084 11.3070223 9.7186457 11.1217032 8.9041743 0.8818212 8.6347054 7.2608377 8.5220514 10.5066018 5.0517332 11.7494172 10.0666818 7.0110897 13.2825525 10.3407256 9.8519124 11.9895139 10.8726195 9.8257863 2.4667576 TCGA-EW-A1PB 70 0 NA 608 breast stage iiia t3 n1a mx 2-10-2014 female 2009 NA NA infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 117.51.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.5731e-06 8.672572e-07 12.1073977 NA 5.5282275 11.2834880 NA 9.4310763 NA 8.3570404 10.5285421 9.7170836 8.4937690 7.5778087 7.4558187 9.9239033 8.3627088 9.5244387 8.7302993 9.8014193 7.8195666 8.3123353 9.7357703 11.9003461 12.1226167 9.2684676 9.9756858 9.7159769 8.1131895 9.9752233 4.7259102 1.5382898 8.5557077 9.7215024 12.0880652 6.5231730 11.6352885 11.2968739 10.0434305 7.0229914 4.7433965 8.3035205 7.3823759 8.3225519 7.8071475 4.6162812 -1.6317345 13.2698824 10.4195645 8.3108699 9.5445287 10.6709945 8.0194073 6.5680275 1.3683772 14.7207220 14.1774913 2.0688084 9.2271136 NA 4.0122111 9.1039114 9.1072922 9.1299068 8.7203989 8.7037458 10.1521723 2.5382898 10.4394827 10.4541600 3.6162871 9.2099200 0.6902830 5.3456341 13.6599939 8.8208851 10.1603323 9.5917540 11.5846467 -0.6317345 NA 9.5161964 8.8731746 12.5652650 -1.6317345 1.3683772 8.5594146 9.8884831 8.6823721 2.9533211 7.8501550 4.6162812 10.0287972 11.8256082 4.3456377 12.8472515 4.0407785 6.0122111 10.6897200 12.1340560 11.5779612 7.8741668 10.0328028 11.0131131 10.0454144 10.1889335 4.0687912 8.7542181 11.6176171 6.9830654 -0.6317345 11.7301623 8.5231738 1.5382898 1.3916028 8.5717034 11.1915237 10.2247811 9.8344320 15.3436885 9.6497060 8.5320052 4.7082038 -1.6317345 11.4568126 8.1980781 12.0973389 12.0759304 9.9026583 9.8257363 7.7925216 9.8823445 0.5413600 0.5413600 1.4805000 0.0164250 0.5287100 0.4434200 -0.0814720 -0.0556030 -0.0134260 0.3703500 0.3703500 1.2450000 1.0298000 -0.0577890 0.5162900 0.5383700 0.5383700 0.5768300 -0.0368100 1.0034000 -0.0540160 0.3784100 0.4999500 -0.0291750 0.6236900 0.5316900 0.5316900 0.0000000 0.5042900 -0.0550820 0.5413600 -0.0437370 -0.0465830 0.5115900 -0.0804890 -0.0438730 -0.0550950 -0.0572500 -0.0134260 0.0091705 -0.0725410 0.8513700 0.3288200 -0.0304040 -0.0304040 -0.0304040 -0.0355850 -0.0577890 -0.0751140 0.5190900 -0.0538810 -0.0499780 -0.0395290 -0.0519910 -0.0588660 -0.0595380 -0.0953840 1.0510000 -0.0525310 -0.0402090 -0.0575200 -0.0704020 0.0000000 0.6249700 2.9640000 -0.0502350 0.524 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.000 0.000 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 0.524 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.000 0.000 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 8.8092247 12.4641646 -1.6317345 9.3137993 2.8919246 9.7585245 1.9533025 4.7946186 9.2509985 7.2990926 NA 7.3020466 9.8914274 11.4607823 9.8395227 4.3225483 5.0407829 9.3086692 6.1232441 10.0552937 9.8302748 5.5079056 9.1497154 4.4558204 8.5995767 10.1521723 2.2752455 NA 10.6761255 4.2509995 12.7910117 11.7626843 6.2138449 10.1390195 12.1443773 9.4330982 5.5282275 2.0688084 -0.6317345 -1.6317345 9.8024624 10.1249119 6.4127494 0.3683772 9.6919790 7.1098223 9.8379973 1.9533025 9.0416646 -0.0466230 11.2394907 3.3225483 1.6902830 10.4894843 7.6400989 3.0687912 10.7830408 10.6692800 6.2012457 4.2752455 13.5807379 NA 11.3734537 NA 10.0574799 3.1232358 7.8801082 8.8318798 12.059881 10.068362 8.750980 11.635288 11.092799 12.225267 4.616281 7.692536 9.430955 10.412750 13.304901 11.772166 8.873175 9.292426 3.983067 5.577809 9.932029 10.232929 3.412754 8.393495 8.303520 5.794621 8.849156 8.316723 5.717084 9.268468 10.578723 -1.631735 5.263173 10.982479 10.861210 10.798808 5.876151 10.460782 7.533263 6.676695 9.129907 10.744481 10.391763 9.870193 9.869695 8.044313 NA 9.836608 5.827786 5.322552 8.682372 3.368349 11.082560 10.028797 7.699563 14.253385 11.510622 10.132813 12.435874 10.697872 8.568028 3.322548 TCGA-EW-A1PC 66 0 NA 187 breast stage iib t3 n0 (i-) mx 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 216.36.0 NA NA 3 3 NA NA 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.39178e-06 7.509076e-07 12.09145654 0.71922726 6.89485171 11.23772599 0.49682023 9.79717352 NA 9.63466587 11.40858736 10.11490041 9.21678005 7.42163315 10.12283408 9.05779060 6.11153007 9.11704071 9.18040052 9.85693637 7.87475455 1.37128005 10.82923047 10.49682093 13.68901096 10.61273159 9.69444721 10.75734842 3.23378071 11.38340406 -2.08804003 2.81874833 6.76048178 9.84148667 13.54459806 7.22019741 13.31955769 12.07495770 9.94390419 7.91185813 5.75734867 6.50057263 7.79297245 11.73303448 7.43737923 12.46548769 3.12131386 9.80856927 13.62188453 7.19494690 10.47428454 11.36525767 8.78145217 6.09673413 1.91184495 15.26317528 10.17893768 1.61230531 7.34648625 -2.08804003 2.15979062 10.57985689 11.42398158 9.16924632 10.27297974 9.34909033 9.52656829 1.08181681 10.04210722 10.01514614 7.19494690 7.72082225 2.71920535 7.53207846 14.47484608 6.95422889 10.78607135 11.23688272 8.79755486 2.23379605 -0.08819339 9.53207827 9.70749218 10.15562744 0.23376538 3.97794845 7.61921784 11.79497894 10.13344549 6.94252506 3.74475313 6.02560027 9.89627684 12.22183205 5.92308499 13.23086010 7.38150056 7.98063658 11.70586804 13.52314261 12.67127851 9.06667665 10.62739143 10.83945120 10.00672454 10.74889499 5.48928602 8.74474842 12.06928431 8.30953320 NA 10.93786305 10.05332696 1.08181681 3.16433577 9.09735322 10.75597571 9.95112018 9.83407105 15.33023812 10.26941040 9.60534543 9.25615442 1.37128005 13.97109722 7.04114111 12.11160740 12.05961982 10.47147444 9.22133481 8.43933557 11.30239823 -0.106180 1.372000 1.264300 -0.189740 1.976800 -0.649730 2.311500 0.000000 0.000000 0.204170 1.527900 0.784480 0.253080 -0.145920 0.245290 -0.185210 -0.185210 0.242180 -0.158490 0.090749 2.350900 -0.658920 1.004700 1.004700 1.004700 0.594760 3.656900 -0.167770 0.772330 -0.106180 -0.106180 -0.164590 -0.171700 -0.669560 -0.682500 0.243810 0.258090 -0.039258 0.000000 -0.009574 0.595810 -0.241800 0.164900 1.105000 0.931240 0.941440 0.119170 0.281210 -0.674170 -0.204730 -0.185210 -0.625030 -0.173980 1.789700 -0.650340 -0.032314 -0.658920 -0.187600 -0.230550 1.004700 0.179050 -0.617290 -0.167770 0.433910 0.122440 -0.261990 0.231 0.231 -0.225 -0.225 -0.174 -0.174 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.174 0.803 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 0.231 0.231 -0.225 -0.225 -0.174 -0.174 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.174 0.803 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 7.16452383 13.07015250 6.76048178 10.07990366 3.27327716 10.96595394 NA NA 9.78990935 9.52610814 -0.50307753 6.74790831 4.30417515 10.79144163 9.74909207 7.82325067 4.61229941 10.00560602 7.41369562 11.12420282 8.88799279 7.40970999 10.42780455 1.99931456 8.05268813 9.52656829 1.08181681 0.49682023 10.96764920 0.71922726 12.74623069 13.32105042 8.08053029 9.41568410 11.70586804 9.91783376 4.87764120 0.91188329 -0.08819339 8.05268813 8.35480211 9.42410497 10.21449738 1.99931456 8.72948955 7.32760025 10.42706546 5.32124987 10.38480307 -0.08819339 10.14697514 1.91184495 3.97794845 8.93529384 7.08336018 -0.50307753 8.51641155 6.98600014 2.76983520 3.49682023 13.09394234 NA 10.61792270 NA 7.92308558 4.65332376 8.32760025 8.53847996 8.669248 12.737513 7.086784 13.319558 9.535232 11.306187 12.465488 9.822126 8.819748 10.607087 12.795934 10.550747 9.707492 9.553910 4.744748 8.561115 11.753128 11.509445 4.830722 8.440312 8.570070 10.654799 10.635620 4.900543 2.719205 10.612732 9.706274 2.435415 6.827738 8.872447 9.623525 9.611431 7.451017 9.302565 10.905328 3.233781 9.169246 10.041785 11.392396 10.314604 10.879085 8.212211 9.606216 9.264001 6.916220 3.269407 10.133445 7.310602 10.720219 9.896277 7.727242 13.509911 10.627391 10.394162 12.941448 10.642329 9.804401 1.233765 TCGA-EW-A1PD 61 0 NA 424 breast stage iia t1c n1a m0 2-10-2014 male 2010 NA NA infiltrating ductal carcinoma yes 2 white hispanic or latino 117.51.0 NA NA 1 4 NA NA 3 1 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.734514e-06 4.162835e-07 11.28487996 8.01640885 6.88865315 11.93142733 1.60326433 10.35479517 2.34022043 10.49097940 11.32321023 8.25828477 9.75919363 7.17479289 9.81703033 10.05903493 6.09153694 9.00413056 10.95345361 10.38752238 7.82134350 1.75527217 10.47087308 10.61074564 14.76492536 9.15527970 9.14068511 10.86821487 3.92518293 9.94112069 NA 1.43333339 9.18319544 11.80101384 12.84099217 7.34621586 14.02826296 13.09176073 9.21959570 6.08437684 3.01829589 6.60825186 8.67650015 10.61851123 7.96275664 12.58600704 0.01834931 10.31444004 13.12605055 4.18821100 8.79800806 11.41167903 7.50746722 3.71872328 -0.56661319 12.30764949 10.56201971 2.13376078 8.77983982 2.13376078 6.01075523 9.23907004 9.50411782 9.15442524 9.93913767 10.33306062 10.33720788 -0.56661319 10.91032538 10.84483708 5.77317614 7.51813460 -0.56661319 10.99961800 15.25147133 8.88468155 11.31558700 11.83166898 6.51014226 2.01827809 6.14068460 8.13895829 9.41346567 10.92392628 0.75522943 6.46123222 7.19487699 9.91462103 11.00318169 5.87626890 5.26621684 5.07718317 9.24068092 12.07695682 1.75527217 13.24755804 2.43333339 7.47772023 12.30359446 12.31367489 12.72291274 7.58307299 10.34696354 11.06313800 10.86251834 10.82268857 5.07718317 8.24550327 11.36849113 11.34171867 0.01834931 10.09109113 9.23260776 -0.56661319 3.07717462 9.61572048 10.55226716 10.43403039 8.94902593 14.81869982 11.01640885 9.78426529 8.28975149 2.75525080 15.48407815 9.98214795 12.25440245 11.03021467 9.80455828 9.82886019 8.41203670 9.76846523 -0.53073000 -0.00166290 -0.00277070 0.00889600 -0.01188700 0.52136000 0.51246000 -0.01656700 -0.01656700 0.07771800 0.07771800 1.15510000 -0.00470790 -0.00769550 0.00249690 0.00249690 0.00249690 -0.54462000 0.50359000 0.00000000 0.01140000 -0.00332430 -0.55286000 0.68663000 1.28250000 0.39595000 0.39595000 0.39595000 0.04524100 -0.55737000 -0.53073000 0.00624810 -0.54229000 -0.09015600 0.01321300 0.02511000 0.02511000 0.00972760 -0.01656700 -0.01656700 -0.00207840 -0.56591000 -0.54159000 -0.48123000 -0.48123000 -0.00221680 -0.51527000 -0.00769550 -0.00769550 -0.54209000 -0.53439000 -0.54462000 0.00166420 0.00166420 0.00000000 0.01140000 0.00402430 -0.00041585 -0.55286000 0.68663000 0.05893700 0.39595000 0.39595000 0.97090000 -0.00193990 -0.01752900 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.513 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.513 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 7.96665599 14.32629572 4.85959193 10.60105781 3.64278243 10.91638603 2.52079937 NA 8.27724694 8.44874117 0.01834931 8.77409980 1.89274073 10.49941531 9.79964832 2.82564318 8.09332195 10.32890141 8.98695526 10.40486960 10.07500308 8.08437791 11.98815473 2.52079937 8.48996393 10.33720788 5.36406460 NA 11.28566051 3.64278243 12.03602494 11.80455820 8.50746762 10.21263499 7.73938774 9.75299824 3.43332004 0.01834931 0.01834931 3.60325246 8.13376592 8.90093170 9.45430608 5.58307374 9.75391787 7.30060515 9.84218658 7.16464551 10.45013436 -1.56661319 11.08617106 1.43333339 4.92517818 9.47023465 5.42756595 1.01827809 9.40271259 8.43050566 5.46674783 1.01827809 13.11313602 1.24068068 10.85591653 NA 8.26937638 6.34621586 8.69776861 9.25907990 12.71540095 8.03880543 8.89582821 14.02826296 10.17886176 10.06404819 12.58600704 13.06700250 8.94568144 10.38424639 12.49756362 11.53135816 9.41346567 8.31444004 0.01834931 7.89889277 11.45621399 11.308883 5.623150 8.123324 8.751869 10.161247 9.909556 5.773176 8.900932 9.155280 7.580531 -1.566613 8.687173 9.066058 12.223471 9.924678 8.320547 8.554860 11.420412 3.956884 9.154425 10.596976 12.410427 10.405588 10.735394 9.071762 NA 9.075549 7.931896 2.825643 11.003182 7.615720 10.706247 9.240681 7.630543 13.120592 9.518134 9.592567 12.881959 11.430153 9.798555 1.018278 TCGA-EW-A1PE 56 0 NA 320 breast stage iia t1c n1a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 117.51.0 NA NA 2 2 NA NA 1 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 11.0935301 5.7303003 7.5289901 11.3590459 0.6684822 11.0280541 -1.6533551 10.0728142 11.9588886 8.6028046 9.8637732 8.3772630 9.0617001 9.0956273 8.8642654 9.9530012 10.9371830 9.5675789 7.5388889 3.1014820 10.2134885 10.7931624 14.0133470 11.0379033 9.4616397 10.5499439 6.8504219 10.3334690 NA 2.5945247 8.6875587 11.7979359 12.1398386 7.5778170 12.7352860 13.0787634 9.8987847 6.5064671 3.8060250 4.8060301 8.3731196 11.1796837 7.4525048 13.3760126 2.0470497 11.4057714 13.6850886 7.8344363 9.2209396 10.7329974 6.0190213 7.8563707 NA 15.3870560 10.9188225 1.1539350 8.0154808 -1.6533551 6.2231136 10.1857998 10.5121312 8.6594790 12.1085627 10.0330966 10.1401993 2.0470497 11.9046579 10.2383797 6.9868409 9.0400828 1.8060353 11.9162143 14.7400870 8.8470395 11.6105987 11.6321427 10.0960465 1.1539350 2.0470497 8.0813055 9.1834354 12.5984482 NA 4.9613038 7.5014145 9.8740730 11.3204727 6.0539541 7.1180856 5.7812233 10.6366148 11.6560723 3.1539512 13.5865301 6.7085404 7.3295892 12.0297003 12.3468601 12.6766025 8.0048075 10.4835871 10.7814848 10.5089653 11.1073160 5.1410117 8.2978806 11.8650033 8.9631449 NA 10.4800593 8.8344360 3.8384476 3.8099597 9.9654403 10.2115559 10.4204028 9.0787635 15.4882940 10.0796113 9.9159769 9.5903649 2.5165195 16.2058699 9.8686871 13.2502425 11.5781172 10.3634043 9.1114675 8.6389177 10.7596500 -0.33214000 0.34974000 0.34974000 0.01810300 0.01810300 -0.33075000 0.00656110 -0.05961500 -0.05265900 -0.11965000 -0.11965000 -0.11965000 -0.00474980 0.00471900 0.00972760 0.00972760 0.00972760 0.00805670 0.00805670 -0.02548300 0.03157700 -0.01178600 -0.68570000 0.00249690 -0.00739980 -0.01656700 -0.01656700 -0.01656700 0.00000000 -0.33214000 -0.33214000 -0.30932000 0.01810300 -0.33075000 -0.33075000 0.01838300 0.01838300 -0.05961500 -0.05265900 -0.06074800 0.01112100 0.00791750 -0.11965000 0.01922300 0.01922300 0.01321300 0.01321300 0.00471900 0.00471900 0.01209700 0.00972760 0.00805670 0.00805670 0.00805670 -0.02548300 0.02132300 -0.00041585 -0.69378000 -0.68570000 0.00249690 0.01363200 -0.01934400 -0.01656700 0.00000000 -0.02425100 -0.00456950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 8.9695629 13.9725046 4.9613038 10.0074833 4.2484286 10.6025098 1.9315696 -1.6533551 8.1523396 8.8494279 -1.6533551 7.3619832 3.6685276 10.2417925 9.4938008 1.9315696 8.1230288 8.9324974 10.8334310 10.1189106 9.7928729 8.9483666 11.9019041 4.0470323 8.6875587 10.1401993 3.2534901 1.8060353 10.6925556 3.1014820 12.3012467 12.2427391 8.2519832 10.3469481 11.8991450 9.0409538 4.7559878 2.5165195 -0.6533551 4.0745140 8.6331536 9.9399871 10.8835716 3.2045790 7.8805876 6.5609151 9.3352807 7.0574026 9.5302313 NA 13.0838961 5.0608429 5.4126867 9.3317762 6.0934461 7.5897702 10.2613549 9.2138748 9.0453007 4.3465953 12.9894374 -0.6533551 10.0838433 -1.6533551 8.4393530 6.0190213 7.4835869 8.4059405 13.511660 5.401880 7.995852 12.735286 10.615138 10.275114 13.376013 12.381223 9.430527 11.053524 13.286772 9.087220 9.183435 8.404588 -1.653355 7.101483 12.281116 11.1924780 7.9240250 8.8652492 8.6775128 8.8632809 10.5049722 7.8142018 8.4300753 11.0379033 6.5462679 0.3466449 5.0330970 8.3673121 10.9476703 10.7292200 9.1031522 8.7172833 13.8052269 8.1999054 8.6594790 10.9702489 11.7156480 10.5474946 10.9138390 9.5980784 NA 9.9877446 7.4677408 8.5401215 11.3204727 7.3661867 10.3954234 10.6366148 7.2978810 12.0780211 10.2242635 10.3978049 13.4115071 10.1098083 9.4803805 3.2045790 TCGA-EW-A1PF 50 0 NA 439 breast stage ia t1c n0 m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 117.51.0 NA NA 4 5 NA NA 3 3 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.7604012 7.5888293 8.0645930 11.8337732 0.5254676 9.8212032 1.1104301 10.3464109 11.6727981 7.5780020 10.0790635 7.6128972 8.8708394 9.7881163 5.8563508 9.1566113 10.4770832 9.6834126 7.5338631 2.3327938 9.9204327 10.2206625 15.2449968 10.3709242 8.1364590 10.8306409 6.2396806 10.5908503 0.8473556 -0.4745324 8.7828220 12.8131465 12.5762181 9.7524484 12.4686816 12.7531253 9.5394547 5.4912182 2.7733634 6.7780995 8.5268423 9.3018672 8.0876766 12.5797841 -1.4747329 9.8125693 12.5867210 4.5698313 9.0516889 10.9485500 8.7433918 7.4738015 NA 13.6219109 9.8085225 1.5254174 8.3677847 -1.4747329 5.8473631 10.1484011 10.3226904 7.9432867 11.6672220 10.3799130 10.1433608 1.9848810 12.0485060 10.7614483 6.2258745 8.3100692 3.6547219 10.6585764 15.3158972 9.2062508 11.4126548 10.7974807 8.5698283 1.1104301 7.8719477 7.9390620 9.1969753 11.4400061 0.1103632 6.7542528 7.3067936 9.7786907 11.2796954 6.0489968 6.1978595 5.3067945 9.9714836 11.3561474 4.8473606 14.0760607 4.8292153 7.0092497 12.4485759 13.4568181 12.8242127 8.3927128 10.3170041 10.4285628 9.4566591 10.8846346 4.7733634 8.7626441 11.5025352 11.8792702 -1.4747329 10.5622946 8.8829863 0.8473556 3.0521376 9.6391763 10.4202520 9.7840002 8.9401195 15.1487727 10.4879687 9.9198969 8.2482416 2.7733634 14.9033733 6.9432873 12.6851478 11.1940976 10.4046345 9.5289520 8.5505737 10.1994321 1.2240e-02 1.2240e-02 -4.1421e-01 -8.0002e-04 3.4257e-02 -1.5643e-02 2.9574e-06 2.3241e-01 -1.0505e-02 -4.1761e-01 1.8060e-03 4.4139e-01 0.0000e+00 8.1989e-03 -4.0384e-01 -4.0384e-01 -4.0384e-01 7.5030e-03 4.7219e-03 -4.1981e-01 -4.1531e-01 1.0706e-02 -3.9241e-01 -3.9241e-01 1.6987e-02 -3.3848e-02 -3.3848e-02 7.9220e-01 5.1944e-01 -3.9541e-01 1.2240e-02 -4.1761e-01 -8.0002e-04 1.5730e-02 3.9413e-01 2.9574e-06 2.9574e-06 4.3414e-02 5.3240e-02 -4.6743e-03 -4.8432e-03 -5.6728e-03 -4.1761e-01 -6.1686e-02 -6.1686e-02 -6.1686e-02 -6.1686e-02 8.1989e-03 3.1540e-03 -4.0384e-01 -4.0873e-01 4.7219e-03 4.7219e-03 4.7219e-03 -4.1849e-01 -4.1531e-01 1.0706e-02 3.2425e-02 -8.0360e-01 -3.9241e-01 -4.1937e-01 -8.2532e-02 -3.6804e-01 -3.8439e-02 -1.5214e-03 5.8655e-02 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 9.6934795 13.9597366 7.8675086 10.4883301 4.3834140 11.8677867 4.6751836 0.1103632 8.1309139 8.4839870 0.1103632 8.4997626 2.9848627 10.5488420 9.2405381 1.3327938 9.0102570 9.5935407 8.6391764 10.1889923 10.2053100 8.8630560 11.6657846 3.3834140 9.4620722 10.1433608 4.7733634 1.6953703 11.1063993 2.3327938 11.7470213 11.7221899 8.5041444 9.7409672 8.6751812 9.4635436 4.8829853 1.6953703 -1.4747329 1.6953703 8.9899800 8.9166779 10.4465313 4.4080800 10.3788919 7.4998491 9.5491886 6.9305753 9.7361056 NA 10.4919397 3.9848627 4.7348884 9.5952330 6.8879042 5.4796315 9.4027183 8.7177271 9.7703925 1.5254174 13.4315732 1.3327938 11.1778310 NA 8.3927128 5.9848650 8.0548648 8.7733618 12.319748 6.169290 8.991001 12.468682 9.428563 9.528952 12.579784 12.814589 8.559766 10.870562 13.019852 10.455432 9.196975 7.473802 1.332794 6.860825 12.658416 11.469414 7.270268 9.025280 8.966303 7.539454 10.471843 7.533863 9.202273 10.370924 7.300222 2.917756 6.140145 7.914657 11.870839 10.379523 8.058764 8.725106 12.542068 6.943287 7.943287 9.873056 11.484712 10.649555 10.881336 9.356741 -1.474733 9.853060 7.612181 7.106635 11.279695 8.017287 11.548669 9.971484 7.332789 13.341368 9.987936 9.513409 12.614222 10.460231 9.612897 3.110397 TCGA-EW-A1PG 53 0 NA 1051 breast stage iib t2 n1a mx 2-10-2014 female 2008 NA NA infiltrating lobular carcinoma yes 1 white hispanic or latino 117.51.0 NA NA 2 5 NA NA 3 3 2 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.668684e-07 0 11.0769632 6.0019913 6.8444497 10.5560509 0.1440464 10.8791432 0.1440464 10.3220526 11.6174624 8.6597102 9.7914687 7.6398652 8.6792859 9.8505063 6.9769009 8.9721467 9.4749272 10.2571013 8.6237904 3.0509021 9.8022218 10.6778267 12.4364757 10.4760469 9.3764313 10.5692262 4.6358646 10.7383349 NA 3.6034424 7.9673773 15.0632228 12.8722497 7.6792859 12.8284302 12.1119570 10.9573907 7.9187977 5.3728302 7.1155535 9.0097435 9.9784814 9.8633991 12.3692177 2.7289653 11.1169901 12.1555870 5.8854767 9.1474438 10.2407255 6.3919378 6.9319123 -0.8559536 12.6402175 7.6870418 3.7289762 8.1884044 0.1440464 4.6034424 9.9776911 10.5352539 10.0019913 11.3731295 10.1482307 10.2525348 3.2314785 11.4880287 9.8120088 4.9513640 7.2988287 13.3906025 10.2629514 15.0901627 8.3101233 11.3886715 11.8831580 8.0894542 3.1440137 2.6034305 9.0388282 9.6587244 13.1626452 NA 2.4659484 7.3776296 9.4827467 11.7916936 8.3139351 5.6831687 3.9513640 10.5581670 11.9142612 0.1440464 13.6643220 4.2732921 7.9577916 13.3571905 12.0327535 13.1365947 7.6278264 10.3601498 11.1639484 11.0129717 11.5563155 4.8444509 8.1829291 12.1798404 12.3347610 1.4659222 10.6923506 9.7596399 3.0509021 3.8466638 9.5702751 10.9121946 10.6029295 10.0974793 15.1924333 10.4999119 9.7887679 7.4107965 3.1440137 15.4292861 9.2668383 14.2979581 13.6561952 9.0879902 9.1965783 8.4794007 9.3958950 0.07988000 0.07988000 0.07988000 -0.00110870 -0.00110870 0.00041593 -0.00249380 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00708260 0.00708260 0.00241190 0.00241190 0.00241190 0.00000000 0.00000000 -0.00401620 0.13746000 -0.00581400 -0.01821600 -0.01821600 0.13288000 -0.00816240 -0.00816240 -0.00816240 0.00069327 0.07988000 0.07988000 -0.00296590 -0.00110870 0.00041593 0.00041593 -0.00249380 -0.00249380 -0.00166290 -0.00166290 -0.00166290 0.00097064 -0.00752000 -0.00166290 0.16513000 0.16513000 0.16513000 0.16513000 0.00708260 0.00708260 0.00241190 0.00241190 0.00000000 0.00000000 0.00000000 -0.00401620 0.13746000 -0.00581400 -0.19262000 -0.01821600 -0.01821600 0.00069327 -0.00816240 -0.00816240 0.00069327 -0.00429290 -0.01477800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 7.9800607 13.0656653 7.4568932 10.3139353 NA 10.4172231 1.4659222 2.1440137 8.4568932 7.8340083 2.7289653 8.3318078 1.7289653 10.5781172 9.2047061 0.7290089 9.0297066 9.7760967 11.1184249 9.1198583 9.5005943 7.6116158 11.5959941 4.4294151 9.1566348 10.2525348 5.9384269 -0.8559536 9.9253700 3.8444459 13.1791530 12.0738235 7.6714873 10.2407255 7.6675721 9.7779138 4.8164359 0.7290089 1.1439811 6.0747473 7.6318500 7.7513405 8.6656106 5.0266540 6.7062529 5.8444509 9.8719308 6.3824148 9.5255533 -0.8559536 11.0232106 5.4477908 4.5363265 9.9606341 5.4980402 4.5702747 9.9392383 7.7550351 7.0143754 1.9513640 14.0057273 NA 10.3637839 NA 9.7577998 4.9253681 8.3680118 8.1580310 12.7993554 4.3139351 8.5037598 12.8284302 10.0887224 10.6493256 12.3692177 12.2004787 9.2301466 10.9224982 13.6410513 12.6501939 9.6587244 9.5341793 -0.8559536 7.6034416 11.1155538 11.3827136 5.8988976 9.4534867 9.1691498 7.1155535 10.2428780 4.8719323 5.8988976 10.4760469 6.6518051 5.8854767 7.6518051 5.2720568 13.2725686 10.3565067 9.3716262 8.0688229 11.9117810 5.5534004 10.0019913 10.5869538 11.2652200 10.1454185 10.8093462 9.7457810 -0.8559536 9.2315128 8.7607063 6.9319123 11.7916936 7.6909045 11.1803694 10.5581670 7.0569000 14.4758020 10.2148021 10.6408641 13.7621090 10.2400666 9.6024170 0.1440464 TCGA-EW-A1PH 52 0 NA 607 breast stage iia t1c n1a m0 2-10-2014 female 2010 NA NA infiltrating ductal carcinoma no 1 white hispanic or latino 124.53.0 NA NA 4 1 NA NA 2 5 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 9.455874e-07 1.112456e-07 11.9775593 2.4338942 7.6536971 13.5621352 NA 9.7961191 NA 8.9490572 11.0175926 10.3873035 9.3865273 8.2187361 9.2693018 9.7333964 7.1994181 8.5822749 9.3471713 10.5378702 8.8579092 5.4338842 10.1138323 10.0685731 13.3148440 10.1985334 9.7832011 10.9342602 5.3083536 10.6397577 6.6918998 3.5713856 8.5128345 10.2287321 12.2940389 8.3818609 12.6147867 12.0050036 8.1175797 6.7019177 4.0505539 11.8149933 9.2029495 10.5635095 6.1780433 -0.4729297 NA 12.5627366 8.0525132 8.9106967 9.5320485 11.3942712 7.6144551 7.1708484 1.3343394 15.8523140 8.6024717 1.9864109 7.6792774 -1.4731299 3.6144507 9.0017125 10.7379681 10.4963790 9.1636170 9.2108644 9.1780441 5.9616210 10.6127968 11.6361701 2.9864291 6.9448444 0.5269702 7.0347869 13.9899100 7.5597549 10.9350567 10.0012054 9.9294716 1.1119661 -1.4731299 7.9363835 9.8729520 9.6918993 NA 6.5548988 6.6038073 11.2776994 10.7509941 4.9699379 6.8170118 4.6969175 10.0815813 11.9643544 5.8757211 13.9898461 4.1417025 7.8646146 11.4628941 12.1008763 13.2885956 6.7890876 10.3515535 11.1796134 10.8934321 10.7294224 4.5269952 8.5451927 12.2470229 10.7766985 6.6302802 9.5206385 11.3695392 2.4338942 3.0511807 9.3108093 9.4495768 10.1222499 9.6374757 14.9079945 10.6843393 10.3981276 7.8123949 0.8489584 12.1816284 9.1949910 12.8944754 11.2797912 9.7509942 9.6741974 7.6302802 10.0831248 -0.2392400 0.3145000 0.5512400 0.1250500 0.7111400 0.6097300 -0.4295600 0.7817600 -0.0156040 3.6569000 -0.9652400 2.1270000 1.0319000 -0.0065050 -0.0223320 -0.0223320 -0.0223320 0.0058309 0.0058309 -0.2733200 -0.4477100 -0.4338700 0.0188030 0.6527700 0.3637900 -0.1828200 2.8868000 -0.0972320 0.4006100 -0.2407000 -0.2392400 -0.4644000 0.1250500 0.0151680 -0.3878300 -0.6551100 -1.2929000 0.7817600 0.1631000 -0.0161540 0.0079175 -0.0580580 -0.5454200 0.4188100 0.3966200 -0.1551500 -0.1911200 -0.0065050 -0.0065050 -0.3745900 -0.0223320 0.0058309 -0.1921200 -0.1921200 -0.2480000 -0.4487000 -0.3134200 0.0493980 0.0075000 -0.2125500 0.0987060 -0.4645100 -0.0972320 0.0125160 0.4754700 -0.4680300 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.177 0.000 0.420 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.111 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.177 0.000 0.420 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.111 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 7.4695067 12.9171614 7.3407732 9.5255829 2.6321751 11.4212418 1.9864109 6.9657843 8.9363832 11.0483475 6.4157350 9.0593482 5.7937789 10.6614187 8.8341932 3.2818763 6.6511134 10.7525012 5.8933137 9.3934986 9.0662870 6.4695067 10.6852865 -0.4729297 9.5493602 9.1780441 7.1157075 NA 10.2536363 5.1563481 13.3787415 12.9032535 8.9771726 10.4506913 12.4487404 12.2328408 3.1119494 0.5269702 -1.4731299 7.5659117 8.0407199 9.6665438 7.9363835 8.0108084 7.5082741 6.4035097 10.4316270 5.3598831 11.0340437 5.3973580 10.4289906 3.1708544 4.7364479 9.6150453 6.3396184 6.1994172 7.6767399 7.2099875 6.7749201 8.1563491 14.3436261 1.3343394 10.8795877 5.8398765 10.3197827 4.7364479 8.5368211 8.4338829 12.1951162 10.7355317 8.8307731 12.6147867 9.6918993 11.2758143 -0.4729297 10.3744414 9.1444599 10.6959779 13.5429301 11.3722865 9.8729520 8.3132622 1.8489183 9.5700198 10.2321928 11.098508 4.308354 8.945899 8.977173 8.980263 10.085471 5.593082 4.170846 10.198533 9.893315 2.334339 8.593081 8.698607 11.917161 10.051044 8.288544 9.384196 6.884544 7.156349 10.496379 9.735836 11.583630 11.455326 10.513901 8.770166 1.334339 9.032893 7.053609 7.115707 10.750994 6.676740 10.554971 10.081581 6.876031 14.285398 10.296417 10.679277 12.289790 10.912316 9.948531 1.696929 TCGA-EW-A2FR 59 0 NA 1673 breast stage iiic t1b n3a mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 19 black or african american not hispanic or latino 216.36.0 NA NA 2 4 NA NA 2 2 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.056833e-06 1.668684e-07 12.1918193 5.6464507 7.1269316 11.2878854 -0.1523237 9.8382851 NA 10.0749232 11.0892944 8.1003738 9.7705405 7.2961692 8.0636458 10.1438598 6.1082359 9.4169311 8.3435633 10.8790650 8.5177745 3.0176369 10.0857150 11.1041136 13.9795386 9.4969646 8.9562330 10.6391426 5.7384787 10.8512216 0.2627939 -0.7372061 9.4531879 12.1313756 11.8281098 9.0218017 17.4990428 12.0163805 10.2450265 4.0956375 -1.7374466 7.6136849 8.9855534 6.4963649 9.4993580 11.3671809 -1.7374466 10.4323577 11.5846740 5.4624188 9.4977788 9.6973742 8.7485753 4.6377841 NA 14.2944206 11.5842654 3.1207335 8.9864070 -0.7372061 5.5846739 9.7155020 10.5753452 9.7505859 10.2256419 9.8486474 10.0197191 -1.7374466 10.9334022 9.9016343 5.6464507 7.9137978 12.5836169 8.9544895 15.9753468 8.4205856 10.9936405 11.0719111 8.2471642 3.8173367 4.9209554 8.6442889 9.0547226 11.2994347 2.1696364 8.0075796 7.4301640 9.8057777 11.4565792 7.4624180 6.6377856 6.0042137 10.1916343 11.5998102 5.9701059 13.5607368 5.7384787 6.6550627 12.3602020 15.0503552 12.6941129 8.5400335 11.2652093 11.2778124 10.3291378 10.5094865 4.4525691 9.2292514 11.1373431 10.3458928 -0.1523237 10.6301606 9.4054912 1.8477164 3.0187054 9.6339780 10.9904537 10.2913427 8.8259420 15.2329080 9.9240787 9.4891582 7.3475540 3.3920289 14.4193820 7.6180969 13.1464870 11.8353277 9.7216650 9.7799232 8.4022971 9.8931586 -0.2563600 0.1651600 0.1670000 -0.1409100 0.0559430 -0.1178300 0.0546600 0.0548030 0.0542820 2.0601000 -0.3145200 0.0055529 0.0161460 0.0161460 -0.1115500 0.3047300 -0.2857200 0.0480490 0.0803120 0.0000000 -0.1557900 -0.1009200 -0.1153500 3.6569000 -0.0809400 0.3747900 -0.2556400 -0.1006600 1.9310000 -0.2563600 -0.2563600 -0.1200400 -0.2852500 -0.1178300 -0.1178300 0.0546600 0.0546600 0.0548030 0.0542820 0.0542820 0.0682350 0.0494370 -0.4701400 -0.1076200 -0.1076200 -0.1076200 -0.1076200 0.0161460 0.0161460 -0.1115500 -0.2613100 0.0480490 0.0803120 0.0803120 0.0000000 -0.1356100 -0.1009200 0.0777180 -0.1153500 -0.0809400 -0.1212100 -0.2407000 -0.1886100 -0.2624000 0.4527500 -0.0941960 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 9.8765354 15.9721259 7.2934128 10.9439843 3.6478325 11.3660337 1.7221600 1.4326922 8.3220904 10.4822169 5.0701016 9.9575390 3.2627488 10.8002070 10.0688927 5.4525691 8.6059317 9.2045271 9.7615951 9.4162978 9.2643863 7.3868670 12.1255769 1.5846739 6.6890112 10.0197191 2.7863036 NA 10.9054746 1.9631782 12.3706168 12.3920289 9.4181967 10.1923742 8.7705407 9.2920331 6.1514895 1.9631782 0.8476763 2.9066020 8.5248406 9.3640650 9.7369588 4.5106708 10.1883225 7.6763739 10.1141045 6.5481484 9.3362180 -0.1523237 9.3200609 3.7545989 3.9351674 9.4521442 5.9935227 6.2627451 9.8589357 8.5653847 8.0956360 3.7545989 13.8950027 1.0701145 10.6989369 NA 8.0126156 4.8019036 8.8598674 8.6827060 12.4359624 6.8134926 8.7108622 17.4990428 10.3378908 10.6829693 11.3671809 10.5742104 8.6763739 10.5975778 13.3640650 7.9011819 9.0547226 8.9898154 0.5846739 7.1875579 11.8005710 11.664959 4.963187 8.428909 9.406767 8.323442 10.405906 7.142329 7.312594 9.496965 7.123833 4.529534 9.502344 7.419866 12.728822 10.057974 8.706725 9.244313 9.608151 5.976991 9.750586 10.269423 10.949465 10.364393 10.310211 8.947495 8.122281 9.824444 8.449603 6.257099 11.456579 10.241814 10.583969 10.191634 6.762592 13.587102 10.010939 10.123445 12.202141 11.087108 9.343563 2.963178 TCGA-EW-A2FS 41 0 NA 1604 breast stage iib t2 n1mi mx 2-10-2014 female 2008 NA NA infiltrating ductal carcinoma no 1 black or african american not hispanic or latino 155.46.0 NA NA 1 3 NA NA 3 1 3 2 1 1 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 2.503025e-07 11.6673346 8.4604280 7.2232806 10.7117088 1.3760125 10.2210414 -1.4312869 9.1261082 10.7902316 12.2274138 10.2111475 8.0863141 8.4710196 9.2525164 6.0604971 9.7621699 9.8453505 10.5473550 7.3598075 4.1536108 12.3741868 9.9129404 14.2083526 11.2045893 9.1998215 10.4543408 6.7683167 10.4698885 1.1536108 2.5686402 7.1759746 12.4675292 13.3004408 8.9843863 13.0190181 13.4259452 8.4125656 6.8118191 2.8165792 6.1906958 9.4133502 9.7448177 7.9349670 12.7743614 -1.4312869 10.7741323 14.1973178 3.0280740 9.7164855 11.2102447 7.0604971 8.0260254 2.1536108 12.7162628 12.0287816 2.3760125 7.7435702 NA 5.8447698 9.1879473 9.6817354 9.3679260 9.7190265 9.8534686 9.9068237 0.8905634 10.5027038 10.1759747 5.1078050 7.1346984 3.9609657 11.1608679 14.2336472 7.5042223 10.8689971 10.7640167 9.4702656 0.1535460 6.0604971 7.6979274 8.9118303 9.8837940 -1.4312869 5.2828883 8.0095135 9.9057088 10.4623252 8.6171313 6.3368297 3.8165690 10.1554843 12.3234276 7.9801556 13.2252369 7.0803976 8.3549140 11.5295514 10.5608747 13.4638411 8.1629693 10.5322631 10.8040604 10.3389037 10.4409346 3.6979295 9.3695443 11.5328048 11.0771821 -0.4312869 10.4837769 8.6184931 2.3760125 4.1572054 9.1731977 10.3844281 10.3739853 8.1385002 15.8604807 11.1909251 9.6849884 9.6927658 1.8905634 15.8341313 6.5111596 12.0163735 11.8168686 9.4573877 10.0892631 7.8447692 9.4823941 -0.083465 0.350390 0.350390 0.092895 0.235500 0.145180 -0.091420 0.000000 0.000000 0.040326 0.040326 0.040326 0.110670 -0.473320 0.090430 2.635400 -0.477540 0.057967 0.057967 -0.192080 0.114620 -0.102240 0.163700 0.163700 1.366600 -0.215280 -0.215280 -0.215280 0.146070 -0.083465 -0.083465 0.071966 -0.387500 0.145180 0.145180 -0.091420 -0.091420 0.000000 0.000000 0.000000 0.048120 0.048120 -0.490470 -0.156510 -0.156510 -0.156510 -0.152850 -0.473320 -0.473690 0.090430 -0.481340 0.057967 0.057967 0.097252 -0.192080 -0.477540 -0.102240 -0.274610 -0.473420 0.163700 -0.081472 -0.215280 -0.215280 0.066564 -1.087400 -0.458960 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.157 -0.157 0.000 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.157 -0.157 0.000 9.2223853 11.1253900 4.3235286 9.2931582 5.2140859 11.2601699 3.8165690 0.8905634 8.5840594 6.5228404 0.1535460 7.6427860 4.9780354 11.3587893 9.1222738 6.2690837 8.7902315 9.5784731 7.8424402 10.7332372 10.2520690 7.7310359 10.4971629 2.8165792 8.1058629 9.9068237 6.1980010 5.3235322 11.4351507 5.4266271 12.7938519 12.5560861 7.9588137 10.3206069 9.1611014 9.7658612 5.7974644 3.8905732 2.2690930 6.4695116 9.4882527 10.6461278 10.6431205 4.9084959 9.1170329 8.2375293 10.0813849 5.8354315 11.1708794 NA 9.9689903 1.1536108 7.7584691 10.0859497 6.6189287 8.1833545 9.0912259 7.2828901 10.6283270 NA 14.2913186 1.1536108 10.3699487 -1.4312869 9.1916115 6.9040348 8.9360593 7.2304230 14.792691 6.262131 9.497903 13.019018 10.556974 10.434378 12.774361 13.012106 8.100396 9.919584 13.170415 11.285678 8.911830 9.030124 1.153611 8.294863 12.225516 10.874706 6.748554 8.999076 9.454341 8.333516 10.133018 6.557329 8.681084 11.204589 8.269084 4.350002 9.265612 8.612437 9.562998 10.216103 7.044378 9.984386 8.208889 7.511159 9.367926 10.096121 12.316837 8.691472 10.124672 7.052460 2.738573 8.833603 7.114034 8.962035 10.462325 3.568640 11.205804 10.155484 7.599312 13.859527 10.435537 10.537671 11.446695 10.560166 10.064000 3.697929 TCGA-EW-A2FV 39 0 NA 788 breast stage iiic t3 n3a mx 2-10-2014 female 2011 NA NA other specify no 29 white hispanic or latino 155.46.0 NA NA 4 5 NA NA 3 3 3 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 8.343418e-08 11.7496415 7.2561775 7.1845788 11.5361272 2.1873877 10.3654415 -0.8124856 9.7803232 11.8889222 10.7870795 9.8442708 7.4186201 8.4923207 10.3750605 6.0700415 8.9431214 9.9846553 10.6355154 7.3944138 4.9818161 10.3102271 10.0527457 14.4027804 10.7671864 9.0147419 11.1974026 6.3218253 10.2375777 -0.2276920 -0.2276920 8.9178691 12.1585834 12.4415419 7.1445012 12.5314869 13.4742456 9.7462982 5.1181354 2.2748580 6.2208213 8.7873120 10.5016991 7.0453796 12.7881832 NA 11.2494452 13.5160390 7.6651575 9.3204770 10.8027988 6.6832543 6.6832543 1.1873877 14.6593532 9.2507942 3.3968582 7.2453911 1.3573268 5.7798559 9.9658870 10.5433007 9.5840040 10.0577638 9.9493658 9.4687497 2.7723713 10.8738996 9.9435384 5.2426825 6.7947291 4.6136613 9.2688825 14.4160675 8.0080089 11.0153372 10.7180493 7.8615913 -0.2276920 4.8021105 7.9605384 9.3205413 11.6149738 -1.8124856 4.2097653 7.7226744 10.2180662 10.9474953 8.2194449 6.5002826 5.1986277 10.7204854 11.8026839 3.3968582 13.7742389 5.2208213 7.7458195 11.8324946 14.1984079 12.8779973 7.3396844 10.3747512 10.9917318 10.3805641 11.4247585 4.2317933 8.7714221 11.5748780 9.1114693 0.9947245 10.1470389 9.1313791 -0.2276920 3.1420539 9.1159176 11.0639160 10.0627645 8.3243903 15.5379499 10.1415954 10.3153935 7.6792521 3.4727997 14.5997870 6.8982059 12.5993072 12.6088065 9.3876848 8.8465030 8.2000237 10.5315063 -0.115910 0.419020 0.412650 0.035552 0.013184 0.110990 -0.145000 0.151470 0.031323 -0.433960 -0.433960 1.585100 0.151610 -0.125800 -0.093112 -0.093112 -0.093112 -0.135720 0.161630 0.119200 0.707990 -0.126650 -0.394730 -0.368930 3.656900 -0.071980 -0.071980 -0.054528 3.656900 -0.115910 -0.115910 -0.133520 0.035552 0.110990 0.110990 -0.145000 -0.145000 0.151470 0.031323 0.031323 0.053692 -0.444660 -0.433960 -0.173760 -0.173760 -0.173760 -0.132480 -0.125800 -0.125800 -0.093112 -0.093112 -0.135720 0.161630 0.161630 0.119200 -0.113620 -0.124960 -0.098787 -0.394730 -0.368930 -0.184310 -0.071980 -0.054528 -0.107200 0.109380 -0.391380 0.026 -0.126 0.000 0.000 0.162 0.162 0.119 -0.114 -0.127 0.000 0.000 -0.395 -0.395 -0.184 -0.184 0.000 0.000 -0.116 0.303 0.000 0.000 0.109 -0.391 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.235 0.199 -0.174 -0.174 0.000 0.026 -0.126 0.000 0.000 0.162 0.162 0.119 -0.114 -0.127 0.000 0.000 -0.395 -0.395 -0.184 -0.184 0.000 0.000 -0.116 0.303 0.000 0.000 0.109 -0.391 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.235 0.199 -0.174 -0.174 0.000 8.8194855 12.4278923 4.9947562 9.2386080 4.6468308 11.3037431 2.2748580 0.7723924 8.3485308 7.7685999 NA 8.4370816 3.0942867 11.0309277 9.4623595 2.1873877 9.6636390 9.5914762 8.1845783 10.2413250 10.0121551 8.2480950 10.6724737 3.1874035 8.8580553 9.4687497 5.2959250 NA 10.1884553 3.6468308 12.4393253 12.2795781 7.7667151 10.1718175 11.3377810 9.7615195 5.0328899 2.5797112 0.1873877 4.4911797 8.6852509 9.0942897 9.9613624 6.5580870 7.4733794 6.5183164 9.8964829 6.5449505 10.1661096 NA 10.0639160 3.3573268 3.8312591 9.4250812 5.9372008 6.1474003 9.3250306 8.8834974 8.7910255 NA 13.6930866 0.7723924 11.0309277 NA 8.6084119 5.6220284 8.4400644 8.6722220 13.060342 6.362324 8.315393 12.531487 10.441247 10.886755 12.788183 11.640927 8.774895 10.643497 13.421505 10.799576 9.320541 8.830353 1.887837 8.938943 13.948535 10.751787 5.527249 8.897345 7.568942 7.988299 10.334305 6.630343 10.076142 10.767186 5.613664 4.187396 6.695193 8.174535 10.923590 10.462360 8.561352 10.463814 11.138137 6.391970 9.584004 10.368241 11.444050 10.285431 10.393192 9.416819 NA 9.427296 7.668714 7.642726 10.947495 5.935592 10.838226 10.720485 7.624486 13.473488 10.732122 10.418920 11.738627 10.447437 9.597320 1.994761 TCGA-EW-A2FW 52 0 NA 672 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2011 NA NA other specify no 0 white hispanic or latino 155.46.0 NA NA 1 2 NA NA 1 1 3 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 5.562279e-08 12.5118372 5.5512822 6.3749038 11.9312808 -1.4258500 9.8413756 NA 9.4688213 11.1882534 7.3421876 9.6514869 7.3941823 9.1257121 8.7699909 7.8663251 7.9182998 10.0075891 10.4861446 6.8028226 0.1589833 10.1165519 9.7619743 14.3364117 12.2664012 8.8124084 11.2828720 4.6825284 10.0385238 -1.4258500 -1.4258500 6.9315554 10.3019241 12.8127816 6.9918563 13.0248283 13.2745518 8.6786026 7.7687606 4.3019241 6.2106285 8.3570021 11.1999408 6.2813626 13.4658823 1.3813388 9.4210611 15.1361865 -0.4260439 10.3288912 11.3044738 7.3421876 5.9315554 1.3813388 12.0539506 8.4673052 -0.4260439 8.2552420 NA 3.5740046 9.5179837 9.9796770 10.0718556 9.3537231 9.5775215 9.8094196 0.1589833 10.0262450 10.2223613 6.0416088 5.7338749 15.1769635 11.4703361 14.5023138 9.2367433 11.3384606 11.0172062 7.2250551 1.1589833 6.1131629 7.8477990 8.2916800 10.2740098 0.8959230 6.1285924 7.1208983 11.0370171 10.2886785 5.8868866 4.4319839 4.7834567 10.9849850 11.9885568 2.8219347 13.7883987 6.3019241 7.7662963 11.8710632 10.1048976 12.0503702 8.5963717 10.9892173 10.6118938 10.5937160 10.3334758 4.4068904 8.6759793 11.5822572 12.7768162 -1.4258500 9.9636351 8.7501767 0.5739561 2.8249715 9.2060901 10.8541945 10.3989624 7.2813626 15.2255459 10.5873264 8.9138537 7.7389103 2.0334406 16.6946618 4.5512822 10.4797667 10.0497371 10.4323733 8.6786026 8.3520810 10.8670988 -0.86507000 0.76624000 0.79568000 0.00110930 0.02454800 0.02749700 0.01740400 -0.00675160 -0.86066000 0.00861350 0.00861350 0.00861350 0.00027728 0.00027728 -0.01092200 3.65690000 1.41810000 0.01712400 0.01712400 0.00750000 0.02876300 -0.01395300 -0.03313200 -0.03313200 -0.03313200 -0.07361000 -0.07361000 -0.07361000 3.65690000 -0.92461000 0.02174400 -0.55987000 -0.00430470 0.02749700 0.02749700 0.01740400 0.01740400 -0.00675160 -0.86066000 0.02679500 0.02988800 -0.88248000 0.00861350 -0.00995650 -0.00995650 -0.00995650 -0.00995650 0.00027728 -0.02209300 -0.01092200 -0.86531000 0.01712400 -0.01311700 -0.03232900 -0.00910940 0.00138680 -0.01395300 -0.03476800 -0.03313200 -0.03313200 0.00000000 -0.07361000 -0.07361000 -0.05630700 -0.01202400 -0.06786000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4868929 12.0501170 4.9833950 9.0517620 3.2178666 10.5956777 0.8959230 NA 8.9060404 6.9403253 NA 6.4317366 0.8959230 10.3821635 9.5281999 5.5626881 6.7186616 8.5267449 10.6694007 11.6937554 9.7412587 7.4412826 11.7189805 1.5740046 9.3619063 9.8094196 4.0334318 NA 10.7125954 2.3813664 12.0315128 11.3361780 7.9425104 9.5281999 6.6877452 9.8964953 2.1589509 4.0334318 -0.4260439 1.1589833 10.2774747 9.9908012 10.0743477 3.0975602 8.3812622 7.2033607 10.9531113 5.7338749 10.1854896 NA 8.1131624 0.8959230 7.2813626 9.7215965 5.7116105 1.8959230 8.7588791 8.5121131 10.1309886 NA 13.7847892 0.5739561 11.3590474 NA 7.6427817 6.5908116 8.1053853 9.3405327 17.436556 6.097567 8.486893 13.024828 10.136723 11.512848 13.465882 12.868409 10.703206 10.206090 12.227297 9.489883 8.291680 9.014873 4.480892 7.582433 13.405014 10.6779471 8.0313847 7.7687606 9.1533197 10.3328390 10.3773316 5.3019241 10.0138346 12.2664012 6.2250551 -0.4260439 7.5852307 9.6057256 9.7785748 9.7974021 10.2277444 9.9310057 8.2899658 3.1589671 10.0718556 10.2317687 11.7974021 9.5433901 10.6594761 8.0738497 NA 8.8399350 5.9634834 3.8219347 10.2886785 5.9138540 10.6464713 10.9849850 6.5106423 12.8242281 10.0827888 9.6129227 12.0749700 10.0028873 9.5289270 0.8959230 TCGA-EW-A3E8 60 0 NA 647 breast stage iib t3 n0 mx 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 0 white hispanic or latino 255.29.0 NA NA 2 3 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.807741e-06 4.727937e-07 11.1999336 8.3311704 6.7385949 12.1645046 -0.2387147 10.0794812 NA 8.7984044 11.3953698 14.0629065 9.3864150 7.4478155 8.7251743 9.3094948 7.0249756 8.9320748 10.4875332 9.3030569 7.9345755 3.1763547 12.6434486 10.6378320 12.5952593 11.6398769 9.3575047 10.0783507 7.5857437 10.0926052 -0.8236772 1.9837142 9.0567014 10.7869160 13.1370785 6.5513914 13.6742979 12.9716312 9.8540722 7.2370484 2.9312481 6.6234353 8.6530987 10.6457399 6.7385949 12.2469767 2.2638157 11.2735617 13.2773844 2.9837142 9.3989664 10.1489734 9.4075737 8.4230932 NA 15.2259454 10.1868806 1.3463045 8.8707106 NA 4.7613172 9.7734740 9.7608453 9.1756478 11.6580259 9.1283656 10.0127974 5.7309415 10.5926222 10.5897160 7.6742043 7.5686698 9.1819771 10.8143358 14.6378959 7.7766929 10.7776590 10.6179999 9.0060753 1.7613278 3.1305520 8.4325611 7.9642554 10.4355073 1.6358008 5.0343346 7.3858055 9.2783282 10.3004738 8.4744150 7.0922318 4.5513930 9.9283149 11.8846821 3.6999180 12.9868237 6.7725429 7.3711093 11.6266617 12.0328753 12.7624300 8.0832432 10.7208340 10.3637046 10.3075664 10.2936710 4.1070936 9.5167590 11.5034841 11.9712760 NA 10.7610802 8.5492175 0.1763228 3.6688453 9.1239894 10.0952158 9.9278966 8.5718865 14.7580092 10.5377481 9.0567014 9.4869653 3.6026232 15.2491132 6.6999139 12.8515929 12.5044664 10.0681362 9.5659838 7.4337407 9.9936720 0.0045800 0.0045800 0.0174040 -0.0679930 0.0440070 0.0175440 0.0234260 0.0227250 -0.4601400 0.0421660 0.0421660 0.0421660 0.0242680 0.0253900 -0.0719480 -0.0719480 -0.0719480 -0.0561730 -0.0593210 -0.0142280 0.0223040 -0.1645900 0.0197830 0.0197830 0.0197830 0.0000000 0.0000000 0.0000000 0.0153080 -0.0060904 0.0045800 -0.0733430 -0.4527600 0.0175440 0.0011093 0.0234260 0.0234260 0.0227250 -0.4601400 -0.4601400 -0.0414310 -0.0758010 0.0421660 0.0162860 0.0162860 -0.4414500 0.0087157 0.0253900 0.0273570 -0.0719480 -0.0719480 -0.0593210 -0.0593210 -0.0575200 -0.0110600 0.0223040 -0.1645900 -0.4938100 -0.4743800 0.0197830 0.0085804 0.0000000 0.0000000 0.0153080 -0.0502350 -0.0044312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 9.8278527 12.9907848 7.5272917 10.0963332 6.1247189 10.7230059 6.2531686 1.3463045 8.8654769 9.2737264 NA 7.4746899 7.3587470 9.8641656 9.9792727 3.4617512 9.8447944 8.6192960 10.4863972 11.0098356 9.7947473 7.2874880 11.7628405 2.8201994 8.4290179 10.0127974 4.7462106 NA 10.8303172 3.8767920 12.9290990 12.1392485 7.8871591 9.5459498 10.9322833 9.8300933 5.4337407 1.6358008 -0.8236772 3.4617512 9.8580301 10.4099722 10.2565038 5.9312410 8.5627000 8.0343335 9.9841099 5.5513930 9.5546474 -1.8236772 10.1428580 3.9577103 4.9042721 9.2271331 6.3933407 7.1987200 10.2104636 8.3723397 9.5984173 NA 13.6570796 1.7613278 10.3330677 -0.8236772 8.4349184 4.7613172 7.5162027 8.8628530 13.431616 5.699915 8.635784 13.674298 10.399147 9.865477 12.246977 11.130185 9.269440 10.110043 12.872614 10.421608 7.964255 8.478992 1.346305 7.271750 10.009243 10.9040603 7.0218428 8.6047126 8.7901419 7.9666197 10.0603208 8.6510725 8.0358872 11.6398769 7.8646028 0.7612853 7.2451305 7.4559165 10.9628264 10.1731790 7.8854365 9.7641300 10.6373203 7.4709736 9.1756478 10.8606629 10.0432451 9.8884495 10.3689536 7.9933364 NA 9.6703730 7.7710503 8.3784765 10.3004738 6.1305479 11.3165432 9.9283149 7.0092430 13.9242043 10.3289542 10.4501482 12.4740569 11.4141600 9.3930985 2.8201994 TCGA-EW-A3U0 61 0 NA 532 breast stage iiia t3 n1a m0 2-10-2014 female 2011 NA NA infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 227.33.0 NA NA 4 5 NA NA 2 5 1 6 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.642082e-06 8.065304e-07 10.8312866 6.7415843 9.7134094 11.3052945 0.2766753 10.1740391 NA 9.5395757 11.6003155 9.4449519 9.0883401 8.2672745 8.9084812 10.8274446 7.9491228 9.2785751 8.1573015 10.1885890 8.8015658 5.6575200 10.9626145 10.5415313 11.9131713 10.9826181 9.4466226 10.1195719 9.1336419 10.5512700 2.7791967 -1.3082872 9.7409031 12.4591955 12.4028644 7.6195135 11.7253303 11.6439305 10.3725343 6.1995290 2.8616577 7.4059805 8.7844925 10.9334205 8.3229124 8.6704456 NA 10.9892247 8.2347671 7.5986257 10.6466440 10.2064493 9.8048262 9.2240912 5.1674703 15.4066119 12.0596960 3.7791967 8.9943741 4.9396638 6.6632791 10.2582650 10.0271256 9.3930418 9.8901804 11.1539819 10.6843196 8.5071187 10.3319801 10.5918473 5.2615910 7.6945501 2.0136766 10.4260215 15.4077240 7.9505606 11.1320854 10.4255980 11.2656191 2.0136766 -1.3082872 9.3220025 9.6945503 10.5174891 -1.3082872 0.6917128 8.0023481 11.2601664 10.2059562 3.7361286 7.8541266 6.3921749 8.8261617 12.0819042 3.4466268 13.0945475 5.3921766 7.3137873 11.9703299 11.5380091 12.7116734 6.4730953 11.6889147 10.9576432 10.4433504 10.7347625 4.2152981 8.1795752 11.6068677 9.0192880 1.2766753 11.4205061 8.9060545 2.5986272 6.3176640 10.0332541 10.1180000 10.0575109 8.8553849 14.8633030 10.8591534 8.9817542 7.3210920 2.4990933 12.6477483 5.5620989 13.0292875 12.3064451 9.8735087 10.4353074 8.5023067 9.9993061 -0.0022168 0.3682100 -0.1682800 0.3629700 0.6898000 -0.3869400 0.2470000 0.9880400 1.8238000 -0.3829100 -0.3829100 0.5572600 0.3845200 0.0216030 1.1231000 0.0788710 0.0788710 0.2932600 -0.3847000 0.4940700 0.3898200 1.2603000 -0.0085766 0.0022021 0.7661900 -0.1750000 -0.1750000 -0.3747100 0.4151300 -0.3858200 -0.2797700 -0.1349700 -0.3883900 -0.4051700 -0.3807800 0.1128400 0.0095883 0.9880400 0.4415500 -0.2326400 -0.0135400 -0.3984200 -0.3973000 0.4444300 0.0045800 -0.1919900 -0.2309200 0.0216030 -0.2331100 -0.4084900 0.0469840 0.0123760 -0.3847000 0.5088100 -0.3811200 0.0926050 -0.3847000 0.2103900 -0.0085766 0.0022021 0.3812200 -0.1887300 -0.1750000 -0.0310860 0.0070826 -0.3977500 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.000 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.000 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 10.4507912 13.5630630 3.1511607 11.0995341 7.1915814 12.7621917 7.0667748 3.0136588 9.3990944 11.1606138 7.4828983 9.4536853 5.0315849 10.1840892 9.0990029 2.1511769 10.6661499 9.1623941 9.5372254 9.0293571 8.8074551 7.1715151 11.4139024 3.8210162 9.5535976 10.6843196 3.5986272 NA 10.9649481 7.7443031 12.8277651 12.1113005 8.3676921 10.1127481 9.4042622 9.5015034 5.8210188 2.8616577 NA 4.5986272 9.1064206 9.7374950 7.7113263 9.1377848 6.7602981 7.6016282 10.5423128 5.9955162 10.1372675 6.1593406 11.8586829 4.8414801 4.9011903 9.0963765 5.8797793 8.6269001 9.9217557 10.0792141 10.9923738 1.0136409 12.9497859 0.6917128 10.4561922 -0.3082872 9.1179999 5.0136632 7.6889147 8.4094117 10.456802 7.515102 8.340991 11.725330 10.312413 10.572849 8.670446 12.694374 9.422078 10.852867 13.224943 13.052034 9.694550 7.565179 4.598627 8.315617 10.690326 10.945583 6.142946 8.704360 10.380423 8.335591 9.593869 9.375607 8.161377 10.982618 9.809378 2.013677 9.615805 10.014154 10.620624 10.990371 7.601628 8.543484 9.919351 9.233800 9.393042 10.528180 11.339419 11.349054 10.531333 7.993232 NA 9.892983 7.486151 10.353958 10.205956 6.861660 11.041569 8.826162 7.476370 13.584752 9.732025 10.557082 12.908936 11.583519 9.312871 4.364159 TCGA-EW-A423 75 0 NA 309 breast stage iia t2 n0 mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white hispanic or latino 255.29.0 NA NA 4 3 NA NA 1 2 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.455874e-07 5.840393e-07 10.54627501 2.78695176 7.54437101 12.12477587 -0.02034045 9.04298188 NA 9.07322443 10.55165530 10.64373761 9.09506387 7.18578727 9.13187162 9.70239418 6.69840464 8.34882064 10.44685254 9.49594334 6.33126273 1.56457328 12.07761877 10.19511970 12.79903403 11.12912212 8.66258115 9.89795312 7.55953082 9.81879050 0.71659588 1.39462389 6.41143303 10.59950098 12.42322098 5.10887150 13.36036340 13.20554723 8.88947993 7.38046626 1.39462389 5.61379388 8.16446199 9.49133945 5.27726694 12.97358649 1.39462389 12.42062885 14.09132010 4.17598759 10.72862929 10.54182911 6.81668930 3.43902466 -1.60515664 13.85109958 9.53563290 0.71659588 7.58938074 -1.60515664 3.34882728 8.83549337 9.29549093 9.21639811 10.61953030 9.99964069 9.78586781 4.39462389 10.75327543 11.14595901 7.35462582 7.35752034 3.09506361 11.85187679 14.00809715 8.17077734 9.96305544 10.44821069 7.76966332 1.97958639 8.40165137 6.89845023 7.64728932 10.77778848 NA 4.85405551 8.41560404 8.78586764 10.10715115 3.14951952 5.82088864 3.60408319 10.38330890 11.69454768 6.93765630 12.90890676 7.12933351 7.10198302 10.79416914 12.66104474 11.69154040 8.55070716 10.82925243 9.94103645 9.64551470 10.01025381 2.85405551 9.61802258 10.63481922 10.39989781 1.71655199 10.48473661 8.20840557 -1.60515664 5.12281764 8.47277490 10.39954689 9.86528307 8.35752034 15.00235906 10.49298537 9.07761874 10.09332882 1.39462389 16.32857989 9.49856762 12.08691278 11.13672305 10.04836494 10.41247649 8.32240230 11.09230200 0.4008800 1.2795000 1.2516000 -0.4673100 -0.0243020 -0.0660340 0.3992200 0.4059800 0.3871100 0.0039163 0.0039163 0.0142780 0.2721600 0.2721600 0.4140600 3.6569000 -0.5266900 -0.0548750 -0.0641560 0.4411500 -0.5166500 -0.0323650 0.3222800 0.3222800 0.3222800 0.3655300 0.3655300 0.3655300 0.4369300 -0.4893600 0.4008800 -0.4564400 -0.4686900 -0.0460920 -0.0683110 0.3960600 0.3960600 0.4059800 0.3871100 0.4003800 0.3874400 0.3874400 0.0039163 -0.5078600 -0.5078600 -0.5078600 -0.4929100 0.2721600 0.2721600 0.4020400 -0.5063300 -0.0548750 -0.5001000 -0.0195030 0.3801700 -0.5097400 -0.5047700 -0.4945800 -0.5101500 0.3222800 -0.4972900 -0.5453600 0.3655300 0.3978900 0.4117200 -0.4866300 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.514 0.000 -0.058 -0.467 0.000 0.322 -0.497 -0.497 0.366 0.366 0.401 1.252 -0.144 0.227 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.514 0.000 -0.058 -0.467 0.000 0.322 -0.497 -0.497 0.366 0.366 0.401 1.252 -0.144 0.227 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 8.55575596 12.26363960 3.71655199 9.26575943 1.71655199 12.59835455 0.71659588 NA 9.41212861 7.45261602 -0.60537611 5.79550463 2.09508049 9.65671909 10.09289480 2.97958639 5.49265758 9.73447423 9.05818227 11.77562629 9.45132281 6.60407726 10.47577477 3.78694131 7.81879050 9.78586781 2.64256296 1.56457328 11.24089810 2.97958639 12.59605897 12.26093720 7.40024844 10.06084816 8.68809571 10.44617299 3.64255140 2.39462389 0.71659588 3.94921741 9.98333881 10.64788074 11.04320648 2.64256296 9.91065412 9.08199997 9.95256654 5.09506361 9.51874560 NA 11.45599539 -0.02034045 4.41699508 10.32879788 7.01638266 1.71655199 9.01484399 7.38046626 7.06704923 1.85407546 14.12930736 0.39462389 10.59061147 -1.60515664 6.32536123 6.68924464 8.07234380 9.15034642 14.411896 6.337138 8.564549 13.360363 10.479765 11.080468 12.973586 11.798169 8.214133 9.249493 12.342170 8.230675 7.647289 9.365449 3.439025 7.510968 11.479765 10.4853982 6.4169917 9.0950639 8.4820871 8.4390184 10.0852638 8.2954912 5.6234426 11.1291221 6.6377986 0.3946239 7.6330286 8.0237255 8.1857873 10.0289815 6.8984502 10.3404338 8.6150024 4.2019788 9.2163981 10.1092990 10.8809564 9.5011871 10.4478713 6.3134871 -1.6051566 9.9041320 5.3253612 3.6040832 10.1071512 3.3015145 10.8791954 10.3833089 7.1019830 14.3717248 9.8668072 9.7411380 11.7192267 10.9540013 9.3697557 NA TCGA-EW-A424 51 0 NA 322 breast stage iib t3 n1 mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white hispanic or latino 255.29.0 NA NA 2 3 NA NA 1 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.4737370 6.1134317 7.5588944 11.7330171 1.9368546 9.4740606 NA 8.7802399 10.7146455 13.9599901 10.0024827 7.0557835 8.8296381 9.5692317 7.3320195 8.7409734 9.4952630 9.7011609 7.3490591 0.3518544 11.4162857 10.8886126 11.4091946 11.4396740 8.5305445 10.1958008 3.7441934 10.2936610 NA 4.0243019 6.5758811 11.5367551 13.0657495 7.9064685 12.7633907 12.9727868 9.7880708 7.2707429 3.1592417 7.8051506 8.3880535 9.5035306 8.2707429 12.7309196 1.9368546 9.8265996 14.0186033 4.8910400 10.3335077 10.6430504 7.3935389 3.1067671 -0.6481456 13.6113450 8.8685645 0.3518544 9.0941891 NA 4.6917296 9.2237850 9.5619422 9.7083318 11.4071622 9.5398503 9.9688879 1.5218046 10.3550462 10.4346941 7.4071624 7.4446373 7.3546946 11.6806949 14.4094485 6.4993389 10.7135494 10.5104894 8.0899721 2.3518827 6.2826177 9.4656219 7.5392317 10.9773603 -0.6481456 5.3631080 7.7182020 10.5454051 10.3345169 5.8754410 4.3518827 3.9665874 9.6972851 12.0664473 1.8113066 13.6156258 6.0933468 7.3797856 11.4041081 13.1537901 12.4129133 9.2640205 11.0176598 10.8542143 10.6539475 9.9975381 3.5613384 9.4830936 11.4738988 11.8664705 -1.6479195 10.3652024 8.5454051 1.5218046 4.8279359 8.3797856 11.3291597 10.0536194 8.5637679 14.2648158 10.4821285 8.8265996 9.4649706 3.4393439 14.4025149 9.3111573 12.7504899 13.4236773 9.9236323 9.5003563 7.2617724 10.3007433 0.00416320 0.64276000 0.64854000 0.00903120 -0.00585810 -0.01614600 0.00875280 0.02834100 -0.02342900 -0.63972000 -0.63972000 0.00694350 0.02946600 0.02946600 0.03256300 0.03256300 0.03256300 0.00651450 0.00651450 0.01335300 -0.64311000 0.06422500 0.06392600 0.06392600 0.06392600 0.09304000 0.08488100 0.08488100 0.07486700 -0.59789000 0.00416320 0.00000000 -0.00585810 0.07887100 -0.02315500 -0.00329230 -0.00329230 0.02398700 -0.02342900 -0.67426000 -0.00025623 0.05708300 -0.65454000 -0.11228000 -0.10145000 -0.10145000 -0.10145000 0.02946600 0.04840400 0.05580000 -0.65334000 0.00651450 0.01152800 0.06895200 -0.01432300 -0.64311000 -0.62713000 -0.61959000 0.06392600 0.06392600 0.06393900 0.09304000 0.08488100 0.07599100 0.00499690 0.12904000 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 8.7686773 13.0753274 7.4630150 10.1997201 2.8178483 11.1509589 1.1592417 -0.0631077 9.1430426 9.3391438 1.5218046 7.1448326 4.2345243 10.2785463 9.8808222 3.3060726 8.4734131 9.0626862 9.4446368 10.6485092 9.2852975 6.9555058 10.4538554 1.6738278 10.3490593 9.9688879 5.3853033 NA 10.9566646 4.5807003 12.8603554 11.7904117 7.5317885 10.3017064 8.0065157 9.5998072 4.1592336 -1.6479195 -1.6479195 3.9368452 9.5230565 10.5530847 9.6210064 5.5417038 9.2382774 8.4326972 10.8786235 5.6556609 9.6268403 NA 11.1422282 3.7094340 4.7094340 9.8518152 7.3820230 4.9957378 9.2044093 7.4152745 9.5317889 -0.6481456 14.3338260 -0.6481456 10.3794402 -0.0631077 8.6476487 5.2098588 7.7633910 9.0357517 12.237751 6.100074 8.637282 12.763391 10.324142 10.899497 12.730920 11.197958 9.367100 10.181603 12.545636 11.482450 7.539232 8.924580 3.052312 7.501627 10.596244 10.833427 6.910301 8.441992 9.307530 7.964748 9.995718 6.146295 5.769732 11.439674 8.947137 4.052320 8.444637 6.332248 11.018769 9.822030 7.020764 9.966590 9.345526 5.521805 9.708332 10.192658 9.814893 9.789112 10.328086 7.156011 NA 8.715292 6.283800 6.172059 10.334517 5.803090 10.966360 9.697285 6.418291 14.583626 9.588492 9.927892 12.239291 11.661356 9.844734 -1.647919 TCGA-GI-A2C8 63 0 NA 225 breast stage iiib t4b n0 mx 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 147.48.0 NA NA 1 3 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.809913e-06 6.244252e-07 11.657730966 6.971566545 8.210353307 11.125371946 0.742782340 10.770101074 NA 10.196430124 11.598083634 8.114306634 9.516216908 8.433444399 8.841832578 10.627223790 5.315638682 9.061968400 9.905139213 10.029536674 7.663993515 0.005759269 10.525418623 10.101179409 12.381636334 11.645273798 9.004842924 10.550746785 5.639987470 10.328461648 -1.579059544 1.228172218 8.703908071 11.053133539 12.396399172 6.605695814 9.227369497 12.586747483 11.230788908 5.476102973 3.175700237 6.659225298 8.559091774 10.505296100 8.041039782 12.516134454 0.742782340 10.669340496 13.695853092 5.398100641 9.506511300 11.373561107 7.944381762 8.046528712 -0.579275081 13.460714770 12.406395004 3.668743189 8.220101613 0.005759269 5.733704125 9.880763724 10.669933304 8.000135810 11.637717238 9.563565052 9.881275815 3.121264120 11.775069230 10.080369863 5.724601163 7.983062001 1.005759269 10.350817884 14.626632186 7.832415365 9.626613075 10.935040743 8.705065565 2.121247540 6.994466585 8.975408646 9.706799893 10.820097809 NA 5.570566150 7.630272950 9.713141434 10.708532225 8.830210632 7.093245355 5.079032437 10.681445400 11.612341808 NA 13.118004639 5.005781721 7.800198437 11.797623553 13.397786654 12.833125066 8.141919112 10.435189143 10.684382466 9.855880563 11.281906735 4.550100313 7.760670055 12.626994802 13.145706699 -0.579275081 10.575954316 8.360398956 2.228172218 2.769200471 9.928119044 8.959978756 9.841832735 8.947318999 15.412740227 10.074112823 11.775207002 8.455619018 7.172363499 16.415952107 7.152138791 12.985148007 12.248857135 10.158912080 9.699850035 8.510932258 10.414522567 0.2535500 0.4708400 0.4708400 -0.3469800 0.3119300 0.6573700 -0.0158790 -0.3632900 -0.0193140 0.4046100 0.4046100 0.0047183 0.0669450 -0.2610700 3.6569000 0.7318900 -0.0117490 0.0726840 -0.3544200 -0.0186280 0.0310140 -0.7066600 -0.3495000 -0.3366400 3.6569000 0.0095883 0.0095883 0.0095883 0.3889900 -0.3409000 -0.3225100 0.0065262 -0.3469800 -0.3520200 -0.3535000 0.0131480 -0.0048461 -0.3824600 -0.0193140 0.0000000 0.5385400 0.3539800 0.0230050 0.1990800 0.0674940 0.0674940 0.3252700 -0.2610700 0.2835800 -0.3572600 -0.0117490 0.0726840 -0.3544200 -0.3544200 -0.0186280 0.0310140 -0.0074720 -0.3317900 -1.0525000 -0.3366400 -0.3531100 0.0095883 0.0095883 -0.0041546 -0.3611300 -0.3384800 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 9.230588032 12.698470492 7.124723085 11.140208665 3.327716103 9.441799873 -1.579059544 NA 8.409504650 8.535863612 NA 7.980330972 1.005759269 10.306134962 9.280354602 0.005759269 9.452865552 9.399530227 13.322770909 9.256870313 9.062772296 7.492281834 11.469647260 4.959978756 9.505628179 9.881275815 2.813134719 0.005759269 10.411632902 1.880254513 12.307278550 12.207191595 9.647833982 10.378647411 9.114306894 9.052906270 6.247367411 2.420832692 0.420832692 2.742739233 8.899589548 9.543647832 10.311464175 3.375011620 9.241006886 6.644821030 10.019337609 7.984969227 9.104691785 NA 10.591683811 3.944380591 5.375015097 9.654055970 5.774671112 2.668754533 10.147463798 8.710838799 5.659225298 NA 12.838079040 1.420832692 10.628139288 NA 6.605695814 7.443188070 8.671118192 9.221719785 12.540698 3.847085 9.444574 9.227369 10.105130 10.675848 12.516134 10.560371 8.979241 10.595434 12.869969 9.573105 9.706800 7.064676 NA 9.451487 12.220405 11.3838965 8.6192648 8.9206658 8.4652142 6.3633341 10.7412961 7.6278344 5.9677150 11.6452738 7.5397606 1.0057593 6.9677139 5.6773588 10.9539062 10.4497619 8.1988968 8.2678770 10.9849694 5.0932432 8.0001358 10.3973839 11.6703778 10.0048428 10.7131415 9.7314326 0.4208327 9.2912925 8.8361286 5.0057817 10.7085322 8.8637635 11.4068396 10.6814454 7.4895983 13.1294188 10.0433293 10.8494418 12.5652391 9.2795779 10.5571702 3.2281722 TCGA-GI-A2C9 58 0 NA 3342 breast stage iib t3 n0 mx 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 216.36.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.725517e-06 8.343418e-07 13.184679546 3.002648520 6.779628753 11.056120758 NA 10.752516797 1.417704019 9.385631637 10.847353139 8.937321144 9.171737250 7.467533821 9.328327562 9.504484538 8.346943154 8.927459764 8.536626056 10.719181044 9.569335765 7.991331931 10.924488306 11.826279983 13.223076080 11.508293552 9.904017073 10.364591144 4.275662669 11.087677174 7.303381669 -1.582512001 9.710006532 12.226649050 13.407168071 7.794895385 11.754191409 12.861534944 10.149852270 7.607509345 4.118127122 8.685642008 8.277219507 11.586356995 8.530124208 5.032396230 -1.582512001 11.946871376 9.428912228 9.114652287 9.503867468 10.638063155 9.611210196 5.515715605 -1.582512001 14.593941792 10.457632046 1.587605020 9.075896254 0.002594517 2.877116001 9.345462909 11.065143323 8.961683227 9.338037704 10.163359221 10.248596147 7.072321288 10.786736835 10.087455813 6.192472339 7.179236339 1.877116001 6.689148173 15.446605335 8.621681212 10.870440860 10.701352038 11.385811614 2.324580215 2.877116001 9.061541039 9.880698227 10.723461632 NA 4.032391822 7.483773866 11.284770497 10.483774067 3.703089622 6.602560805 6.225039655 10.701641319 11.574873903 1.877116001 13.333984228 5.371882910 6.860628894 11.823889883 13.119316228 13.029516573 9.036987887 11.323071879 10.230263307 9.773355347 11.063118111 4.348423651 7.670350330 12.734178545 8.793810392 4.956841927 10.538570754 9.038821069 0.739588913 3.584000383 9.919521987 11.143051139 10.453171330 9.319306095 14.441179346 10.764198591 10.334683909 5.617357262 2.118127122 12.459942747 6.536626444 12.791297728 11.648455871 9.314774005 9.236267060 8.123317005 9.839802162 0.1523400 0.6008900 0.7507100 -0.2004900 0.8532500 1.0879000 0.3885000 -0.8272400 0.2819400 -0.4298500 0.2700200 1.2490000 1.6803000 -0.3986300 0.5829200 0.0178300 0.0178300 1.5330000 0.4999600 0.4100100 -0.0826620 0.0063940 -0.1563000 -0.3142300 0.1175400 0.2191700 0.0227320 -0.0165950 0.0881200 -0.0756050 0.1523400 -0.1620400 -0.3689500 -0.3715400 -0.3160700 -0.5297100 -0.5774800 -0.8272400 -0.2646800 0.1362900 -0.3516700 -0.2337300 -0.0026254 0.5433100 -0.3749300 -0.3749300 -0.3794300 -0.3986300 -0.8663300 -0.3523600 0.1611600 1.5330000 -0.5081700 -0.4880600 0.0000000 -0.3519000 -0.9376200 0.5897400 -0.2528400 -0.3142300 -0.4857500 -0.0198570 -0.0165950 -0.8111200 -0.3056300 0.6005300 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 0.000 0.320 0.320 -0.253 -0.253 0.543 -0.283 0.196 0.000 0.161 0.161 0.000 0.000 -0.306 0.601 0.267 0.267 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 0.000 0.320 0.320 -0.253 -0.253 0.543 -0.283 0.196 0.000 0.161 0.161 0.000 0.000 -0.306 0.601 0.267 0.267 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 7.9234963 13.5544758 5.0175968 9.5610681 3.4620785 11.3574477 0.7395889 5.3125018 8.2218157 9.8233582 6.2942017 9.6013203 6.4511072 11.2037502 9.5514693 3.5051414 5.6271370 11.0035863 6.9215101 8.8408009 9.3447739 7.3395258 11.9300550 2.0026305 9.5982157 10.2485961 2.1181271 NA 9.9908586 5.6560902 13.7937424 12.4114194 6.6416862 11.0113094 10.5239206 9.2779959 1.5876050 1.2250281 -1.5825120 2.6656202 8.7497213 10.1033097 6.9215101 4.6844709 9.3230343 6.6844709 10.4187412 6.8688954 11.0927598 3.8439537 12.5485771 3.0026485 6.1658778 10.2887661 6.7071037 1.5876050 9.1379292 8.0597365 2.4176770 7.6222561 14.0048764 -0.5822960 11.2426436 -0.5822960 9.3528499 3.5469685 8.5104422 8.4648087 13.513992 7.043394 8.912541 11.754191 10.080642 10.832898 5.032396 11.068961 8.963615 12.100789 12.673820 11.243439 9.880698 8.304906 3.172568 8.187523 10.519332 10.072320886 5.909537915 8.539218534 8.083020783 4.462078502 9.454401091 6.848137162 4.909537915 11.508293552 8.468893619 2.739610514 8.967469522 8.252503652 13.429305245 10.700483761 7.697713363 8.462078911 10.177989028 4.118127122 8.961683227 9.950527757 12.562422774 10.157465429 10.260820764 9.551469298 -1.582512001 9.715300532 7.061252370 5.775237584 10.483774067 9.549541921 10.044306544 10.701641319 7.903836064 14.288458947 10.858813492 10.972513526 12.337758528 10.897212512 8.904519924 0.002594517 TCGA-GM-A2D9 69 1 1812 NA breast stage i t1c n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 3 NA NA 1 2 3 3 5 2 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.006018e-05 2.844604e-06 10.5820474 5.9072392 7.4330654 11.2803917 -0.4677329 10.1505843 0.5321673 9.3135585 10.9056078 11.2094780 8.8985210 7.2326387 8.4480783 9.7232580 7.7989856 9.5109093 10.5087630 9.5094787 6.5321985 1.8541154 11.4110161 10.2412826 12.7044701 11.1237212 8.5683723 10.0655286 5.9245156 10.3697637 NA 2.1171631 7.7989856 11.1339696 12.6881238 7.3395534 12.8250956 13.4981635 10.0645547 4.5765947 -0.4677329 6.8450823 8.6614817 9.6170073 7.7848645 13.0456797 2.6297996 11.8603127 13.7253391 7.1688235 10.6541921 10.3499820 8.0320446 7.5490068 -0.4677329 14.2990176 10.0934868 3.2326454 7.2937503 NA 3.2326454 9.0059046 9.9626514 10.0220468 10.5272593 9.8001559 9.9926547 6.2046240 9.6170073 10.0280539 7.9751424 8.2010839 2.8541353 10.7819049 14.6728289 8.2830064 10.8433795 10.5051787 8.3459800 1.5322172 5.2046259 9.2081558 7.8809273 10.8501767 1.1171631 6.1469077 7.6717505 9.3119181 11.4372097 5.3901793 5.1171631 4.8541253 10.2107989 12.0817429 5.2870881 13.5115347 6.1904094 7.8853456 11.6540561 12.5781291 12.6024875 8.3491826 9.9007053 10.5895137 10.1524187 10.5881591 3.6196595 9.2584169 11.3874567 9.2987277 NA 9.9761784 8.4239827 -0.4677329 4.1177615 9.8059945 10.9341450 9.8036618 8.6895459 15.3076034 9.0079321 9.2770328 10.3987050 2.1171631 15.7773801 9.4893009 12.4551548 11.3407609 9.7257243 9.7207877 8.3266146 10.6046129 -0.01230000 1.09710000 1.12030000 0.00277450 -0.00492270 0.00305220 0.00346870 -0.00138580 -0.00296070 0.69167000 0.65903000 0.00097064 0.00291330 0.00291330 0.00986690 0.73000000 0.66586000 0.00124810 1.88630000 0.00124810 0.00393820 0.00652620 -0.00857660 -0.00857660 -0.00857660 -0.01780300 -0.01780300 0.43682000 0.00277450 -0.01230000 -0.01230000 -0.00180140 0.00277450 0.00305220 -0.00609040 0.00346870 0.00346870 -0.00138580 -0.00296070 -0.00296070 -0.00216660 -0.71167000 -0.71194000 0.00000000 0.00000000 0.00000000 0.00000000 0.00291330 0.01149900 0.00986690 -0.70612000 0.00124810 -0.70406000 0.01167900 0.00124810 0.00084143 0.01768400 -0.74025000 -0.00857660 -0.00857660 0.00819590 -0.01780300 0.43682000 0.00277450 -0.00471550 0.00221930 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 8.4056431 13.1617831 6.7021242 10.1311819 -1.2789336 11.0205411 2.1171631 NA 7.9028864 6.8720493 NA 7.4148417 2.9916261 10.5752261 9.5587222 2.1171631 8.3427703 9.3507810 10.0877466 10.4156058 9.3271832 8.1209133 11.1124574 2.3062039 7.8764948 9.9926547 2.8541353 NA 10.5116240 2.9916261 12.5208835 12.4144598 7.9875261 9.8742735 9.3979321 9.7989854 8.5765928 1.8541154 1.5322172 4.5321985 8.7170742 11.0958718 10.6498419 4.9245180 8.5609060 7.8359796 10.3266148 7.0478982 8.5847667 -0.4677329 10.3917337 3.7801316 6.9500519 8.8650858 6.3311570 3.4390912 9.1868348 7.9500513 10.3192852 -0.4677329 15.0558833 NA 10.1077381 -0.4677329 7.9028864 5.8176002 7.9028864 8.8199111 13.396846 4.439091 8.323362 12.825096 10.711486 11.004890 13.045680 11.838545 9.497983 9.843947 13.493558 8.838261 7.880927 9.422463 NA 7.462937 11.477277 10.965784 4.702126 8.987526 8.714593 6.924517 10.076477 6.915903 8.933078 11.123721 8.509479 1.117163 3.339551 5.505122 10.052818 10.490026 6.966827 10.008945 9.515192 4.486393 10.022047 10.955840 10.649192 9.710864 10.506613 6.661482 2.991626 8.921228 6.817602 5.086788 11.437210 6.609015 10.897428 10.210799 7.211679 14.757256 10.577276 10.191303 12.272190 10.790176 9.887550 2.339565 TCGA-GM-A2DA 46 0 NA 5909 breast stage iib t2 n1b m0 2-10-2014 female 1993 NA NA infiltrating ductal carcinoma yes 2 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 3 2 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.503025e-07 10.1521499 7.2684737 7.8398261 11.3702094 NA 10.6471810 0.1187584 9.0873936 10.7297518 10.0960068 9.9595049 8.5491794 7.8736145 9.1658509 7.8802784 9.2428483 9.7840629 10.4948523 8.3619008 5.4041299 12.8247912 9.8381157 11.7223533 11.4445945 9.6656214 10.0974374 7.8802784 10.1521499 0.1187584 1.7036766 8.1576461 12.0476154 12.8282416 7.3183991 15.4804651 12.1918643 9.8243593 6.0729226 2.1187252 7.5365798 8.9704761 8.5449919 8.3523467 12.4888694 0.1187584 11.4746286 13.5410546 3.7036877 10.0256176 10.1861613 6.2684737 7.1521499 1.1187584 14.5485501 9.7822672 3.7036877 8.1299542 1.1187584 5.1631203 9.1130803 10.2454314 9.2785984 10.4784765 9.8551289 9.7661853 1.1187584 10.9836869 10.1753647 6.3281794 6.7769383 11.9531980 10.8346889 14.4611489 8.9320591 10.3011213 9.9875495 8.2836338 3.5781538 5.8191674 8.6105801 8.5196064 11.3696175 NA 6.4041299 6.9516169 9.6285019 10.9937083 6.6422886 7.7186397 4.4406533 10.5024313 11.9512214 6.3475452 13.6887012 5.6422886 8.1466328 11.9963945 11.9329088 12.8775747 7.7186397 9.5281179 10.6704352 10.3607100 10.7867255 3.7036877 9.0988664 11.6471811 10.2298626 NA 10.0583062 8.4361393 0.1187584 3.8191674 9.2582784 10.5832727 10.3583255 8.1685754 15.2799376 9.8381157 9.5924327 9.6636913 2.1187252 14.1800137 8.9767079 13.2856746 12.4133477 9.2298626 10.0656332 7.9890919 9.3060790 0.00027728 0.00027728 0.47341000 -0.00083160 -0.00083160 -0.00318590 -0.00193060 -0.00083160 -0.00138580 -0.40263000 -0.00083160 0.37523000 0.01098200 0.01098200 0.37594000 -0.00027724 -0.00027724 0.00431620 0.00805670 0.00346870 0.01000600 0.00624810 -0.46717000 3.65690000 1.75130000 0.02482900 0.02482900 0.02482900 0.01419000 0.01391100 0.00027728 0.00346870 -0.00083160 0.00930980 -0.51331000 -0.00193060 -0.00124730 -0.00083160 -0.00138580 -0.00249680 0.00666530 0.00666530 -0.40635000 -0.00156100 -0.00156100 -0.00156100 0.01265500 0.01098200 0.01098200 0.00208050 -0.00027724 0.00431620 0.00805670 0.00805670 0.00346870 0.01000600 0.00624810 -0.48621000 -0.48239000 -0.47702000 -0.08559000 -0.47723000 0.02482900 0.01419000 0.01209700 -0.48218000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 9.6205641 12.7573891 3.7036877 10.0859532 3.8191674 11.1278557 4.1187252 0.1187584 8.6540022 7.1955425 NA 8.1576461 3.4406599 10.6245385 9.7130515 1.1187584 9.8139553 9.4406551 8.3713925 9.8122139 9.3072664 7.5699384 11.1173174 0.1187584 8.5365794 9.7661853 4.5110442 1.1187584 11.3239093 2.7036987 13.4335934 12.0714682 7.9131425 9.8364034 8.8835985 9.6225526 8.3232980 1.7036766 1.7036766 1.7036766 8.5781587 10.9998409 10.9673499 7.0845108 8.3650398 6.9000867 11.4355741 6.0729226 9.0465050 0.1187584 10.3547412 2.4406599 5.3281794 9.6038116 6.7186397 7.1521499 9.4915920 8.4981052 10.2075151 NA 14.3761884 NA 10.2415549 NA 7.9389062 5.9260825 7.6422886 7.9952437 11.628309 5.791152 8.569938 15.480465 10.597497 10.200876 12.488869 11.751722 8.945276 10.212805 13.439950 10.348747 8.519606 9.590402 2.926075 7.711184 10.884427 10.972036 6.926081 9.190189 8.376115 6.832972 10.159619 8.333046 8.832973 11.444594 7.951617 2.926075 4.440653 7.275164 10.096007 10.207515 7.839826 10.334260 9.454117 7.769778 9.278598 11.012028 9.306079 9.590402 10.222015 7.195542 5.366654 9.977796 8.695287 7.762583 10.993708 7.001370 11.200876 10.502431 7.163121 14.340766 10.636396 11.000606 11.701339 10.402973 10.122947 1.118758 TCGA-GM-A2DB 62 0 NA 1616 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 1 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.254869e-06 3.815932e-07 11.3916737 4.3840429 7.3315780 9.4237481 NA 9.4362256 NA 8.5337926 10.5330670 10.4940628 9.4455134 8.3114005 7.8528154 10.6825993 5.6210848 10.6825993 9.5496705 11.2124089 7.7315091 5.7466164 11.9566106 10.3775907 13.8991823 10.5029868 9.2753954 10.8446479 6.1312787 10.3800147 NA 3.5766914 8.1041678 10.9834272 12.4198954 8.0685440 12.0800196 11.2438023 11.5924542 7.0196341 1.8986340 4.7861415 9.0113190 5.0029545 5.5990589 12.2950096 -0.4233328 11.9913760 6.7365616 6.3448746 8.6170354 10.6508322 9.0745426 7.0605068 2.8986147 14.4402015 9.3727304 1.1616297 7.3968693 NA 3.3840498 9.5823153 9.7751358 9.3332471 9.6628270 9.4715086 9.7162421 1.1616297 10.9533588 9.8884390 6.3046114 6.9076082 8.5103812 6.6427795 14.4063640 6.2846011 10.1812440 9.9998067 9.9743654 3.0361165 4.5766914 8.9143128 8.8873035 13.9292860 NA 7.8481541 8.2349022 9.2892178 10.5667947 4.8620943 6.1766040 4.2771293 9.4970437 11.8449403 5.0361209 12.7905544 7.6852155 6.9430129 11.0376585 14.9866120 12.7712937 7.4895799 10.7403405 10.4284398 9.7264379 10.0185975 3.0361165 9.4331164 11.3812252 9.0884435 NA 11.3535350 8.1728805 2.1616620 3.7751875 8.8174822 8.7910098 9.2823230 8.9517303 16.4386985 9.8031030 8.9732956 7.6101139 1.5766672 13.2333391 9.3678537 12.6766960 12.5926284 9.9871421 10.0217055 8.1119661 9.0135480 -0.00041585 -0.00719580 -0.01684100 -0.26673000 0.70232000 0.10170000 -0.05199100 -0.26757000 0.26341000 -0.14387000 -0.05037000 0.23504000 0.18177000 0.17498000 0.00000000 0.23581000 0.22638000 -0.00968060 -0.00360110 -0.25152000 0.65167000 0.00332990 -0.26259000 -0.13678000 0.00277450 0.02918400 0.00805670 0.03976100 0.01153900 -0.00041585 -0.02616700 0.13658000 -0.27212000 -0.25285000 0.10526000 -0.05199100 -0.05469000 0.04414800 0.26341000 -0.28430000 0.69802000 0.35724000 -0.14387000 -0.40030000 -0.40030000 -0.18710000 -0.18710000 0.17498000 0.41764000 0.23752000 0.14965000 -0.02279000 -0.00360110 -0.01381500 -0.24594000 0.73000000 0.00332990 0.03429000 -0.26259000 -0.13678000 -0.04563500 0.03877100 -0.47870000 -0.01188700 -0.10172000 -0.20921000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.716 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.716 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 8.5568302 11.8955160 1.5766672 8.6210848 4.9154731 10.9008713 4.8620943 0.5766672 9.8043067 8.0725459 NA 6.2909367 6.7466164 11.7590851 9.5893154 3.8986147 7.2277420 8.6265392 9.6032142 11.6819446 9.0782095 6.5424747 10.4470555 NA 8.0605068 9.7162421 4.5766914 NA 10.3792071 NA 13.5120400 12.9360285 7.2277420 9.0320179 9.1177875 9.3856549 2.7466137 2.1616620 NA 8.4654342 8.9386345 11.4639114 10.3448751 3.3840498 10.3984966 10.8799007 10.0963270 6.4715078 9.2420268 1.8986340 10.0715463 2.5766914 3.8986147 10.4242336 7.3425574 6.1465473 8.2805945 6.6101139 8.2736581 9.3198421 13.9257646 1.5766672 11.6336671 -0.4233328 9.4684744 3.6641528 8.5596845 8.5511053 12.214925 8.044296 9.670768 12.080020 9.751617 11.206047 12.295010 7.981832 8.960395 9.482078 12.644293 9.599058 8.887303 7.434672 3.483584 7.068544 10.243802 10.368668 4.384043 9.433116 8.979703 7.716242 9.236847 7.669448 7.679978 10.502987 9.225947 4.824620 4.862094 8.144875 11.613895 10.072546 9.945197 10.765898 7.297790 6.565375 9.333247 11.017560 9.900871 9.044296 9.782484 7.131280 7.669448 9.823847 11.391970 9.066539 10.566795 5.131281 9.929838 9.497044 8.080914 14.166400 10.965246 11.170082 11.731192 11.655509 8.634683 1.161630 TCGA-GM-A2DC 57 0 NA 1628 breast stage iia t1c n1a m0 2-10-2014 female 2006 NA NA infiltrating ductal carcinoma yes 1 white not hispanic or latino 177.46.0 NA NA 5 3 NA NA 1 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 3.615481e-07 1.112456e-07 10.5168715 4.2998527 7.0547432 11.9253622 -0.8701235 10.5785638 1.4518573 9.7836721 11.5076841 15.0945654 10.1221615 7.1743255 8.7167711 8.9405030 8.5852585 8.9145660 10.5435592 8.9894660 6.6217838 -0.8701235 12.1237542 9.7409561 13.4812156 11.8866960 9.4199501 9.8873213 5.6690891 9.8864875 0.1298765 1.4518573 5.5728745 10.0606686 12.5766269 7.9178339 13.5961989 12.6914579 9.9564797 6.5975371 3.6534957 7.5975371 8.6613128 4.8023587 6.6297777 12.8363193 1.9372691 10.2154036 14.8738190 1.1299424 9.6940808 10.9726744 7.5687230 8.4013941 NA 13.1335484 8.2305936 4.7148939 8.9596540 NA 3.5893680 8.6076895 9.5832018 8.9227215 9.4686676 8.3611525 8.9340623 0.7149269 10.3289900 10.6515317 5.2998564 8.3825968 3.7148939 10.1460430 13.9515558 8.0809827 10.1348539 10.5970273 7.4428141 0.7149269 7.4918747 9.2707611 8.1214532 11.6864373 0.7149269 6.0724467 8.0217151 10.5960077 10.2456252 5.1523011 5.1960208 4.0841238 8.7574650 12.1341517 4.7737854 13.1030007 6.1633538 8.3418195 11.5356046 12.0345659 12.4943395 8.6036371 9.0398244 11.5551472 10.5011633 10.7674618 2.5893560 8.4764449 11.2537293 11.9012144 -0.8701235 10.2508171 9.6816395 1.4518573 2.3062622 8.8005874 9.4819748 8.8390151 8.8146799 15.9025036 10.6983624 10.4456469 8.8629466 0.7149269 14.6146598 11.4251262 13.0354123 9.8873213 10.1383599 9.6797158 7.5770148 11.2414875 0.97605000 1.53380000 1.49530000 0.00444110 0.00444110 0.00000000 0.55390000 -0.64227000 -0.63661000 1.57790000 2.17560000 2.04010000 0.78659000 -0.63017000 -0.00021555 -0.00021555 -0.00021555 0.02763800 0.02763800 -0.66204000 0.05936600 -0.03871400 1.54430000 0.59746000 0.59746000 -0.57773000 0.49510000 0.49510000 0.58596000 -0.05603800 -0.08094000 -0.05900000 0.00444110 0.00097064 -0.00989310 -0.01367700 -0.01367700 -0.64227000 -0.63661000 -0.63661000 0.60684000 0.00763920 -0.00221680 -0.06362000 -0.06362000 -0.06362000 0.00791750 -0.64010000 -0.00981850 -0.00021555 0.00388540 0.02763800 0.02763800 0.02763800 -0.64029000 -0.58847000 -0.05357800 -0.64762000 -0.63642000 0.59746000 0.44257000 -0.56793000 0.49510000 0.55142000 0.90150000 0.58220000 0.000 -0.641 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.642 -0.642 0.607 0.607 0.759 0.759 0.000 0.000 0.000 0.000 -0.641 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.642 -0.642 0.607 0.607 0.759 0.759 0.000 0.000 0.000 7.6652066 11.4083807 2.4518573 9.2279634 3.0464037 10.7414172 2.2998601 NA 9.0186745 6.5136360 NA 5.6217852 1.7148829 11.0826725 8.9847995 2.4518573 7.0841281 9.4863831 6.0247496 11.2456252 9.7718745 6.6297777 10.6627742 0.8610819 8.9080083 8.9340623 2.5893560 -0.8701235 11.2154037 2.4518573 12.4000806 12.1148837 7.3345021 9.3920261 6.9564795 10.2180569 3.7737854 3.0368198 -0.8701235 2.9372879 8.6806781 10.1892757 9.6969366 3.8303669 10.0486678 6.5136360 9.9372861 4.7737854 10.1564546 NA 9.7007357 NA 4.8303720 9.6816299 7.6783677 1.4518573 9.1256984 6.8372898 5.5893620 2.7148829 13.7082450 NA 10.2904330 NA 8.0125743 5.3967178 7.7629261 7.8129256 14.3994181 5.1072108 9.1171953 13.5961989 9.3527261 11.0536301 12.8363193 12.7931558 8.8041236 9.9080084 12.9720851 10.5939664 8.1214532 9.6931275 0.7149269 7.6921740 11.6838005 10.7186459 7.8372905 8.5603837 9.4563608 8.0125743 10.1798683 5.8023561 8.7186459 11.8866960 6.9501103 -0.8701235 4.2592122 6.5073158 10.0993178 8.5624733 9.0087026 10.2034034 9.8346995 4.4874863 8.9227215 9.9340622 12.1671350 8.4653215 10.4891318 8.2094158 NA 9.5501020 5.4697818 4.8578516 10.2456252 5.3587514 11.6828404 8.7574650 7.4060553 13.2439175 10.4697813 10.6997869 12.1118552 9.1619771 10.1750083 -0.8701235 TCGA-GM-A2DD 53 0 NA 1309 breast stage i t1c n0 (i-) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 167.47.0 NA NA 2 5 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.899646e-07 2.503025e-07 11.3878134 6.9652521 6.3164173 10.8649300 2.1464923 9.5521065 NA 9.1762395 10.6347787 8.5521065 9.1402168 7.6095622 7.5838974 9.7322894 5.0426575 9.3186418 9.4421336 10.4179552 8.2101867 4.8592093 11.6047849 10.5838976 12.3246037 10.2521098 9.0277761 10.5605901 8.1539867 10.1639193 1.7839176 -1.0235630 8.5040443 10.4462090 12.0043005 7.1313858 12.9707438 11.4318944 11.0938856 6.1263142 NA 6.9307634 8.4563474 7.3986317 7.9849960 11.7969456 NA 12.7840228 10.1564763 4.3341177 10.6363447 10.9394632 8.4153590 7.2573379 2.5615217 15.0531632 11.0325274 1.2984824 8.1006886 -1.0235630 5.2053847 8.9849957 10.3450736 9.5079486 9.9021217 9.1032718 10.3704939 2.1464923 10.4457002 10.0386133 5.4523022 7.6419029 3.4360019 6.9595604 14.9287624 7.3743275 10.8380419 10.3933647 9.4971858 2.4360019 3.1464923 7.8251903 8.4400918 11.7488818 -1.0235630 5.7314548 7.3559457 9.7652856 10.8047037 5.5001296 7.5502142 5.5912785 9.9183485 11.6759228 1.5615461 13.4271341 6.2244957 6.6489931 11.9034191 14.0538837 12.2883155 8.2642798 10.0955083 10.7019335 9.6856509 10.5191155 3.3688801 8.9638313 11.2521098 9.2468624 -0.0234164 10.5229794 9.0127407 -0.0234164 3.3242346 9.2410097 11.1893675 9.4380466 9.7806982 15.5646083 9.7652856 9.3912524 7.2619698 1.2984824 13.8633593 10.0929112 12.6645989 13.4667913 9.9842953 10.2053859 8.1006886 9.9947674 0.12491000 0.13214000 0.12491000 0.57380000 0.26059000 0.07264200 -0.07747800 -0.15055000 -0.15055000 -0.25612000 0.25887000 0.25887000 -0.03108600 -0.13833000 -0.09208100 -0.16124000 -0.16124000 0.35561000 0.02182500 -0.24302000 0.05879500 0.34437000 -0.12200000 -0.16841000 -0.16841000 0.11932000 0.10865000 0.10865000 0.33060000 0.06565600 0.12491000 -0.23901000 0.05523000 0.07305500 0.04358200 -0.12797000 -0.12797000 -0.06222600 -0.15055000 -0.15055000 0.21606000 -0.12252000 -0.25612000 -0.03849100 -0.03849100 -0.03849100 -0.01491600 -0.13833000 -0.19074000 -0.29307000 -0.16124000 0.35561000 0.02182500 0.02182500 -0.24302000 -0.07334300 -0.09855000 -0.09802300 -0.12200000 -0.16841000 -0.03228700 0.11932000 0.10865000 0.31930000 -0.00035489 -0.06155500 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 9.8430734 13.1108331 6.4028313 9.4724222 5.5766279 10.7967462 4.9307657 1.2984824 9.5903567 8.7903485 NA 7.3299784 3.5615339 10.8637878 9.5615297 0.9765836 9.5755502 8.5157259 8.3029966 11.7379106 9.5327858 7.1006886 11.1218626 4.0209644 7.7871386 10.3704939 10.2059869 NA 10.9047154 2.4360019 13.0574680 12.7708815 7.8984079 9.5349880 10.2849062 10.3779801 6.1364396 2.6770120 -1.0235630 3.2244880 8.9849957 10.6809032 9.8015260 5.7709823 8.4946892 7.8189176 9.9087820 5.5001296 9.2723361 -0.0234164 10.5030664 3.0640378 4.9307657 9.8890076 6.8342991 5.8954311 9.3252953 8.8819542 7.0318495 7.2244947 13.9348933 1.2984824 10.8200957 -0.0234164 7.5464230 5.8469320 8.2244947 8.4195107 10.925766 7.440092 8.979382 12.970744 10.344528 11.429838 11.796946 9.806290 8.362430 10.150869 13.322250 10.619973 8.440092 8.596787 2.146492 7.210187 10.583435 11.270901 4.859209 9.603180 8.166392 7.368884 9.617029 8.670054 7.271188 10.252110 10.121863 2.783918 4.704490 7.652806 10.175012 11.013428 8.034884 9.392309 8.210187 7.631203 9.507949 10.598619 9.679606 9.774229 10.019594 7.121226 -1.023563 9.762518 7.724156 7.161442 10.804704 6.515727 10.610017 9.918349 7.521454 14.161636 10.737287 10.922742 12.118993 11.188151 9.012741 2.298482 TCGA-GM-A2DF 53 0 NA 1299 breast stage iia t1c n1a m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 167.47.0 NA NA 4 5 NA NA 2 5 1 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6.952849e-07 1.39057e-07 11.778509298 5.760670720 5.093243242 10.532770555 NA 9.824364520 0.590721770 8.571836435 10.525418623 10.163760861 9.646027254 8.491611825 8.071871515 10.035759706 6.832330545 8.237003403 9.316395132 10.738797639 8.459052861 3.813134719 11.370464229 12.631034576 13.033688355 11.110053504 9.461109620 9.764005548 7.903627620 10.322629548 6.971566545 1.327687364 8.459052861 10.038516844 12.574094789 7.825961121 11.454156817 12.225555896 11.186934609 5.071869907 0.005759269 7.921661853 9.128610461 9.454930939 6.185692143 3.760668059 NA 11.924459282 10.220708550 7.671118546 10.140709136 10.003667444 10.458538367 7.713141777 1.005759269 13.840917417 9.406661875 2.813134719 8.272568670 NA 8.090590944 8.160600571 9.995176811 8.827556433 9.180708072 8.990200708 9.856750449 5.692282118 11.078919729 9.879995324 5.234600951 6.505628973 3.760668059 7.869968232 15.565488052 7.440326861 10.062420056 9.880763724 10.898704541 2.590745719 -0.994240731 8.082597751 8.920167631 9.640593455 NA 5.071869907 7.077245136 10.206680948 10.565159404 5.900601183 6.767333016 6.380821207 8.981630354 11.551470837 0.005759269 13.353611311 5.706221094 7.220101613 11.206680948 14.431129401 12.110217290 7.560371051 11.047441529 10.598239387 9.765720375 10.690969106 3.005777231 8.493622518 11.847739763 8.052905999 NA 10.352849984 8.930594835 2.327716103 3.465217014 9.229784011 9.067828527 9.974449151 9.481515707 16.013849818 10.557009952 9.415173239 6.635139113 0.590721770 13.387257706 4.215235937 12.398904624 11.907214978 9.480502239 9.742184279 6.747249086 9.127730254 0.000000 0.122510 0.137070 0.401160 0.212870 0.297290 -0.256330 0.328230 0.328230 1.126000 3.413400 0.398340 0.379620 -0.036491 0.189250 0.189250 0.076759 0.105170 -0.059314 3.656900 -0.062315 0.149100 -0.272320 0.031484 0.031484 -0.079165 1.251300 -0.239810 0.124220 0.114670 0.125510 -0.241060 -0.116880 -0.283420 -0.236760 -0.245290 -0.245290 0.328230 0.328230 -0.385340 0.189700 0.554130 -0.258130 0.484980 0.089176 -0.255350 -0.255350 -0.036491 -0.036491 -0.258980 0.076759 0.105170 -0.044402 1.752500 -0.251240 -0.062315 -0.252690 -0.055115 -0.272320 0.031484 -0.092301 -0.088992 -0.239810 -0.267530 0.416360 0.133070 0.380 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.143 0.124 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.228 -0.101 0.116 0.116 0.140 0.398 0.485 0.230 0.000 0.380 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.143 0.124 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.228 -0.101 0.116 0.116 0.140 0.398 0.485 0.230 0.000 9.581321680 13.527076067 0.005759269 9.992335506 4.936520163 11.241198270 3.465217014 5.291183595 9.334457214 6.882299451 5.649638450 7.945361311 3.959974121 10.598239387 9.238203369 4.432044074 9.212796687 10.055630864 6.513577595 10.168802970 8.308878233 5.575639079 12.028670291 2.135075130 8.499637837 9.856750449 3.093239016 NA 10.888425380 2.005795193 13.400914796 13.634512670 7.568024502 9.980913854 9.254895864 9.489598126 2.465217014 2.706221094 -0.994240731 0.005759269 8.770653983 11.227973505 10.526401035 5.544939712 9.945860929 8.753975177 9.545910469 5.175708220 9.690530937 -0.994240731 10.763589012 1.590721770 3.959974121 10.523525594 8.597547934 9.409859524 9.274909005 8.726881612 12.001372866 6.028149189 14.019759224 3.253717034 10.835901343 NA 10.512089968 4.813134719 9.327710490 8.028150294 9.585673 10.622331 9.402387 11.454157 10.446651 11.192516 3.760668 11.210659 8.651441 9.711415 13.132406 10.785502 8.920168 8.063774 1.590722 7.517535 11.483288 9.985921895 4.363332302 9.347834823 8.481515707 6.787142496 8.975629327 7.376470119 7.501637383 11.110053504 10.562767309 1.005759269 8.936519574 8.885334892 11.319515708 10.451314570 7.646027254 9.609408701 7.586983112 8.909664214 8.827556433 10.124074643 9.913424112 11.090922815 10.099860093 7.885365705 0.005759269 9.038365393 7.650684152 10.569931822 10.565159404 5.028149189 10.838672366 8.981630354 7.389486794 14.888783311 10.732426256 10.829945543 12.067997178 10.903249662 8.770653983 4.497637911 TCGA-GM-A2DH 58 0 NA 1286 breast stage i t1c n0 (i+) m0 2-10-2014 female 2007 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 167.47.0 NA NA 2 5 NA NA 2 3 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.336157e-06 5.006051e-07 12.2625910 4.6153633 8.5171280 11.0382322 0.3827226 10.0040208 0.3827226 9.8924765 12.2088527 8.0323169 9.6814515 8.3793164 9.1771173 9.3039474 7.2356993 10.2162242 10.2453389 10.5546289 7.1241689 6.3781856 10.3499277 9.4648506 13.5831404 12.5732053 10.0632369 11.1609429 7.6076676 11.7939932 -0.3542061 -0.9392608 9.0127865 10.5606193 13.0246629 5.0380542 12.5236591 11.8098048 8.2256803 7.1666823 4.6306268 6.1482366 8.5068229 8.8256451 7.6268275 12.7805900 2.9676666 10.0269183 13.7333921 7.4891335 9.4750729 11.3944878 6.1900558 5.5999337 NA 14.6570232 11.9822425 1.3827226 7.1823069 -0.9392608 3.3086958 11.8404928 10.4031259 9.0726994 10.6611510 10.9963068 9.4995653 2.5201959 11.2817563 10.3696812 5.5764738 7.8056072 3.3826949 10.4144716 14.4875132 7.0051338 11.0595401 11.7694263 8.5823738 2.9187488 3.7886961 9.3152116 10.2325757 12.3783273 NA 3.4870361 7.0178752 12.0289002 11.2885398 6.2456497 7.6153626 5.5202054 8.7886939 12.2693126 3.4870361 13.4471412 7.8339128 8.1823069 11.2433229 12.4117126 13.1776047 7.5324487 10.6919505 10.9166152 10.4905228 11.7427804 5.5283775 8.7533889 12.4074949 10.1204559 0.3827226 10.4762511 9.1375891 3.1900617 4.0857985 9.9926189 9.4034037 9.7793063 9.6057378 14.5410903 10.2082963 9.6023541 8.2542988 4.0831453 13.9973193 7.2775190 13.1604911 12.3530951 10.6213451 10.2012837 8.5705483 10.7114527 0.128150 0.128150 0.207630 -0.110240 0.889660 -0.218120 0.337070 0.024548 0.329310 -0.080940 -0.080940 -0.208210 0.222770 0.222770 0.105120 0.105120 0.105120 0.076566 0.169110 -0.336990 -0.121480 -0.121080 0.091155 0.091155 0.071248 -0.154520 -0.154520 -0.154520 0.060245 -0.005261 0.128150 -0.455110 -0.110240 -0.218120 -0.218120 -0.352020 -0.352020 -0.322050 0.329310 0.329310 -0.427020 -0.410800 0.165950 0.276160 0.276160 -0.121870 -0.022469 0.222770 0.308570 0.093040 0.105120 0.076566 0.036973 0.036973 -0.095120 -0.121480 -0.643870 -0.103920 -0.373350 0.071248 0.072540 -0.154520 -0.154520 -0.103030 0.437500 -0.366460 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.136 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.136 9.7180919 12.7883748 7.4807337 9.6296796 5.8089667 11.2750926 4.8551874 1.9676482 8.9796367 8.2219051 5.3461768 8.8567483 1.0607392 10.7644608 9.1455819 6.9464700 9.9303673 10.6485509 9.0628853 10.0040208 9.1965854 8.1574884 10.0294402 2.0607737 8.2092501 9.4995653 4.2105213 -0.9392608 10.3172770 5.2505978 12.7309871 12.3408917 7.5586250 9.8384397 10.4749301 9.4722845 7.6363128 3.0149622 NA 7.2406826 8.7775930 8.8897032 11.6288483 3.5526230 9.1632479 7.2332007 10.0814062 6.5283791 9.9039094 NA 10.9166152 4.7472746 3.8681237 9.8718430 7.7056573 6.0437666 8.9959384 8.3905697 6.3368975 1.0607392 12.7960121 0.6457017 10.6280165 NA 7.5385320 3.5202085 8.4292799 9.0323169 9.305595 8.721661 8.437984 12.523659 9.697851 10.791244 12.780590 8.279942 9.544085 11.217805 13.212385 9.849900 10.232576 8.096947 3.584337 8.547608 11.712274 11.6944498 6.7082314 8.7384929 9.6258756 9.9187544 11.3422413 8.5273597 7.6681035 12.5732053 10.0054855 -0.3542061 5.2702262 9.2546436 9.3849540 11.1126621 7.0747944 9.7158568 10.2400605 7.7937886 9.0726994 9.8777570 11.5624862 9.8335003 10.8837425 10.1170724 9.2787312 10.1244819 8.1075838 7.8139902 11.2885398 9.5979918 11.1461895 8.7886939 7.9586188 13.4643181 10.2820584 10.6639361 12.3019373 11.5631080 9.6382022 1.5201959 TCGA-GM-A2DI 52 0 NA 1883 breast stage i t1c n0 (i+) m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 10.9158510 9.0392141 7.3202148 11.2637743 1.2469553 10.7737912 NA 10.1668225 11.6957706 9.0521724 8.8092083 8.0018535 8.6364180 9.7560812 6.5446461 9.7822415 11.0877440 10.1796729 7.9520225 5.3344288 10.4334930 10.6542338 13.5327535 10.8193505 9.6815942 10.7593773 8.7521160 10.4218834 0.6620232 4.4693585 10.1658293 12.6658728 12.5784429 6.7809452 11.9149646 12.3747455 9.8168216 4.4168938 -0.3380680 6.4693585 8.5199845 7.5012074 7.5012074 12.2396684 1.6620232 10.9051775 12.6279682 6.6620032 8.9996255 10.0882683 7.0543210 7.7757459 -0.3380680 14.6505973 11.7233747 3.1214299 8.9474058 -0.3380680 5.0543189 10.2432041 10.6947381 8.7783476 12.7055435 10.2858850 10.4596650 4.0543189 11.4685532 10.4000958 7.1377371 8.0756316 3.9099267 10.6513981 15.3579658 8.0612599 11.3184284 11.1722732 9.8168216 3.4693520 2.4693651 8.8690179 9.4384365 11.8802640 NA 4.1214382 6.9566247 10.0671450 11.3304453 9.4709677 8.5323684 4.5688955 10.5681425 11.6147448 3.1214299 13.5173587 5.6843727 7.8860050 12.5733955 11.6524621 12.9656416 7.5137529 9.9884330 10.6634117 10.2390452 11.6718321 5.2767125 8.3693627 12.1126993 10.5934797 -0.3380680 10.4629034 9.2469660 3.2469705 1.6217589 10.0987151 9.4152204 10.5137526 9.4252159 15.0003221 10.4869623 10.1885028 8.1618494 3.6620004 15.1222994 7.7118521 13.1128282 13.3165277 9.7587187 9.5121903 8.5956942 10.1484364 0.02479200 0.02479200 0.03990200 0.00249690 0.00249690 -0.17266000 -0.01152700 0.00708260 0.00708260 0.00208050 0.00208050 0.01796300 -0.01381500 -0.01381500 -0.10442000 -0.10442000 -0.10442000 -0.10880000 0.04840400 0.00291330 0.00332990 -0.00429290 -0.15476000 -0.15476000 -0.15476000 -0.00124730 -0.00124730 -0.00124730 0.19360000 0.02479200 0.02479200 -0.00857660 0.00249690 -0.17266000 -0.16841000 0.00485790 0.00485790 0.00708260 0.00708260 0.00708260 0.91602000 -0.19837000 0.00208050 0.00000000 0.00000000 0.00000000 0.00000000 -0.01381500 -0.01381500 -0.10442000 0.00069327 -0.19325000 -0.20261000 -0.20261000 0.00291330 0.00332990 -0.00429290 -0.20709000 -0.15476000 -0.15476000 -0.08943400 -0.00124730 -0.00124730 -0.02219500 0.00449960 -0.08956700 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.014 -0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.014 -0.198 0.000 0.000 0.000 0.000 0.000 10.7388192 13.0384003 8.3379603 10.3085622 6.0661236 10.6767215 6.0882688 0.6620232 7.9004086 7.6506885 0.6620232 8.1680929 0.6620232 10.2840553 9.5027815 -0.3380680 11.1296091 8.9450918 11.4665380 9.7925741 8.9698418 8.0370428 10.7193184 3.9099267 6.3899247 10.4596650 6.8811715 -0.3380680 10.7580598 2.4693651 13.2592414 12.1480843 8.5748928 10.1306276 8.9906784 9.2394324 5.6161989 1.9839330 -0.3380680 5.2165907 8.7468119 9.4482731 9.9657843 5.3899247 5.7673873 5.6843727 9.7159294 6.1697988 9.1111521 -0.3380680 10.6263444 4.9839330 3.8319279 8.7923940 5.7390326 7.5808668 10.1059831 9.3130551 9.2785524 NA 13.7611047 2.2469553 10.2146726 NA 7.9973940 4.6161989 7.6045184 8.8956231 11.991640 4.909931 7.738819 11.914965 10.376249 9.738819 12.239668 12.482781 9.032691 11.207451 13.591817 11.200677 9.438437 8.504354 2.246955 6.801554 11.666926 11.704689 5.592741 9.604518 8.320215 8.141784 10.347129 9.467747 8.058608 10.819350 6.348503 -0.338068 5.334429 7.417759 11.063950 11.386091 8.432403 7.919391 12.784023 8.767912 8.778348 10.551507 11.081964 10.095589 10.676721 9.813020 -0.338068 9.878689 9.039409 9.077745 11.330445 7.298628 11.274411 10.568143 8.001853 14.267194 10.278552 10.491726 12.889469 10.838177 9.441723 3.469352 TCGA-GM-A2DK 58 0 NA 1896 breast stage i t1c n0 (i-) m0 2-10-2014 female 2005 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 167.47.0 NA NA 2 5 NA NA 3 1 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.668684e-07 11.29049369 8.60466182 6.93609373 11.16917296 2.83735797 9.97486382 NA 9.08148610 10.86083744 11.54747788 9.90273160 7.04421159 8.28802166 10.14418151 8.37341331 8.55252155 9.79852057 10.66982836 7.54149471 6.91915413 11.27087614 9.68785977 14.37522577 10.76098485 8.58689457 10.26753404 5.81311163 10.27753732 NA 1.25241566 8.42031775 11.37444920 12.36053015 8.82982673 13.29028786 13.54862573 10.22910504 5.01793081 NA 7.55617878 8.60112598 9.75701824 6.99116581 12.60774887 NA 11.06874147 13.43267993 2.38989716 10.08146719 10.13136826 9.89408835 5.15929011 -0.06960327 13.81434771 10.02445502 NA 7.66517956 -1.06945188 3.32279345 9.11905861 9.22164028 9.55343654 10.04746341 9.65327718 9.38887619 0.51540969 10.34621142 9.99116566 6.01793304 7.09034112 4.01793081 10.83133646 14.23799070 8.03409849 10.33986058 10.74945122 7.81616576 2.73781653 5.77595918 7.10039427 8.33773740 10.48217791 NA 5.43826291 7.08021635 10.87774134 10.22164041 7.74745319 5.17839595 4.81311419 10.83322162 11.37133882 5.73782464 13.93806641 6.34832273 8.34409747 11.52012082 10.75064862 12.23596147 8.62046765 10.06232669 10.77439076 10.17367938 10.07193827 2.93047242 8.91346331 11.27059797 10.24844755 -0.06960327 10.44567674 8.44222238 -0.06960327 2.38989716 8.43230679 10.35987637 10.14478874 9.55068946 15.60464815 10.14782156 9.62308514 8.07512773 2.73781653 15.32536774 8.08275474 11.58957363 11.72468246 9.36405518 9.54517957 7.38579684 9.35673454 -0.00650500 -0.00650500 -0.00650500 0.00404110 0.00777830 0.01028500 0.02188400 0.00444110 0.00444110 0.02188400 0.02188400 0.02188400 0.47204000 -0.51125000 -0.01009400 0.40928000 -0.00539920 -0.51712000 0.45615000 0.00027728 0.01698500 2.73220000 0.33254000 0.33254000 0.33254000 -0.05077600 -0.05077600 -0.05077600 3.65690000 -0.00650500 -0.00650500 -0.06826100 0.00777830 0.01028500 0.01028500 0.00444110 0.00444110 0.00444110 0.00444110 0.00833510 -0.00138580 -0.00138580 0.02188400 -0.00193990 -0.00697710 -0.00697710 -0.00697710 -0.48733000 -0.48733000 -0.01009400 -0.00539920 -0.51712000 0.45615000 0.42663000 0.00027728 -0.52133000 -0.01574100 -0.01917700 -0.20573000 0.33254000 0.00416320 -0.05077600 -0.05077600 -0.01147300 -0.00705760 -0.54492000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6853571 12.2585836 5.4382629 9.8715173 2.7378165 11.3065951 1.9304724 1.7378165 8.8131126 8.7665200 NA 8.0394121 4.0179308 11.1460027 9.3525345 3.7884456 8.6395534 9.3130937 8.3462114 10.4011286 9.8673946 6.9748643 11.8821187 NA 8.3837401 9.3888762 5.7506494 6.3141745 10.4362813 3.5154349 12.6431041 12.5636920 8.1103789 10.1676797 7.9638925 9.8046827 2.7378165 1.9304724 NA 4.6583886 8.5340959 10.7362135 9.6455736 7.2296773 7.0571221 10.2830648 10.2874717 4.3899040 10.0629694 1.2524157 9.8207339 1.9304724 3.3898972 9.7187149 6.6581858 4.2158727 9.3703005 9.1387042 7.2703196 NA 14.0378502 0.9304724 11.0308035 NA 8.8991363 5.8252870 8.3334819 9.1128640 13.46272818 5.91915413 8.59580573 13.29028786 10.11534504 10.17721022 12.60774887 14.64664608 7.92855213 9.06746071 12.83792371 10.80621900 8.33773740 8.86416045 -0.06960327 7.04941077 13.27469622 10.9752053 5.1003932 9.6744456 9.1592883 8.0099546 10.2353970 6.0802163 9.9063176 10.7609848 8.0878166 0.5154097 6.0072852 8.0207144 9.2836165 10.4372731 7.4735012 10.4984257 9.7402378 4.5154349 9.5534365 9.9535309 11.0258667 9.3744492 10.2019328 8.0232271 -1.0694519 9.8887469 6.7993542 5.9191541 10.2216404 5.9304701 11.1479034 10.8332216 7.0442116 13.6735158 10.6156565 10.7798748 12.0345770 10.8207340 9.6532772 2.1004058 TCGA-GM-A2DL 50 0 NA 2763 breast stage i t1c n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 177.46.0 NA NA 2 3 NA NA 1 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 9.455874e-07 1.112456e-07 11.21480552 7.65928668 7.20447137 11.17184081 -1.08558856 9.58156460 NA 9.44972829 11.22903622 7.25430303 9.76620207 7.66599670 7.88599647 9.68676751 6.68263790 9.13966032 9.98926349 10.09560524 7.39018616 6.44583428 10.89566343 10.54926399 11.81795827 11.46880200 9.63896674 10.32331343 5.19985684 10.50737713 NA NA 8.94097628 12.23905545 13.01141515 8.96430159 11.78847373 11.93699419 9.98926349 6.69581291 3.16238730 7.33651816 8.31746507 7.34908126 7.99126843 12.83815186 0.49937395 11.00158426 13.11020964 7.04373601 9.44680892 10.27968184 8.98188746 5.46904264 1.49942497 14.08215257 12.20893014 2.91444972 7.57623112 -0.08558856 4.46903938 9.29057830 10.70886886 9.07179994 10.49376890 9.81531973 9.81154216 NA 11.45748477 10.09684730 5.58687881 7.48810042 3.08437046 10.90207230 15.45264190 8.26746744 10.74139864 10.35480310 8.11412544 2.61489827 3.82134286 8.03598674 8.85550048 11.88563724 NA 7.36153590 7.71858425 9.10551230 12.17654780 7.64577226 6.30677078 6.25430303 10.04180246 11.60793991 2.72181010 14.49314997 4.72181010 7.05911080 12.09187253 13.87418329 12.71999534 7.88023737 10.52363174 10.74852891 9.15967283 10.87951571 2.91444972 8.74576036 12.06006674 11.46086515 -1.08558856 10.59085086 8.82584508 -0.08558856 3.16767906 9.16475134 10.44046308 10.06546945 9.14086504 15.20362534 10.13664411 9.43703460 7.53283824 4.89173511 14.23926639 9.40530381 13.45941740 12.70500511 9.48335912 9.91656472 7.50690973 9.53113969 0.00790170 0.00790170 0.00678860 0.00081620 0.00081620 -0.01672000 -0.00084734 0.01250000 -0.00140150 0.00901540 0.00901540 -0.00845420 0.01231300 0.01231300 1.52340000 1.67890000 -0.00638250 0.02565500 0.00000000 -0.54876000 0.01054800 0.02551500 -0.51497000 -0.51497000 0.00512010 0.01277900 0.01277900 0.01277900 0.02945000 0.04682600 0.00790170 -0.00154010 0.00081620 -0.54180000 -0.01672000 -0.00084734 -0.00084734 0.01250000 -0.00140150 -0.00140150 0.52099000 0.52641000 0.00901540 0.01250000 0.01250000 0.01250000 0.01250000 0.01231300 0.03847300 -0.53064000 -0.53643000 0.00359180 0.00000000 0.00845850 -0.53937000 0.01054800 0.02551500 -0.52976000 -0.51497000 -0.51497000 -0.54059000 0.02523400 0.01277900 0.02945000 -0.52400000 -0.51621000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 8.561911 14.723392 9.038574 10.083125 1.499425 11.345428 0.914488 1.236401 8.541987 9.114125 NA 8.736498 4.373885 10.453127 8.983231 2.721810 8.325964 8.830332 10.731836 11.040835 8.871410 7.276397 11.191740 2.001910 8.739412 9.811542 3.084370 NA 10.498946 3.001910 12.733335 12.405930 7.934043 9.616626 8.428181 9.771657 2.821343 0.914488 0.914488 6.438015 8.881679 9.786358 10.331251 5.529162 8.092420 6.942358 9.677665 4.721810 9.084378 -1.085589 10.286230 3.306773 4.236378 9.972939 7.022402 2.499425 9.593053 8.171841 7.809271 1.721810 14.163603 NA 10.402293 NA 7.586878 4.236378 8.012485 8.375933 13.808198 5.123906 8.954743 11.788474 10.002579 10.417782 12.838152 11.954914 8.803470 10.184164 13.209289 9.924981 8.855500 8.852562 0.914488 6.741002 11.088442 11.378743 5.845191 9.334413 9.004565 7.515220 10.380463 6.536505 7.017740 11.468802 7.361536 2.084370 5.759944 7.190670 11.479555 10.349602 6.280774 9.325964 10.009191 4.936822 9.071800 10.505975 10.565056 9.799387 10.274751 8.321721 NA 9.132895 8.219671 3.868647 12.176548 8.578011 10.780959 10.041802 7.094362 14.369812 10.741399 10.248726 11.949768 11.496830 9.292748 1.499425 TCGA-GM-A2DM 57 0 NA 2331 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white hispanic or latino 167.47.0 NA NA 2 4 NA NA 1 4 3 5 5 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 2.781139e-08 11.8794760 -1.3692218 8.0612599 11.0209761 -0.3692218 10.3146790 -1.3692218 9.8094720 11.7887856 7.6166488 10.2283942 7.7780121 9.3739585 8.3553211 8.0036719 8.9092565 10.9684291 10.0359487 7.3242940 1.9527436 10.1440413 10.0364805 12.8084603 12.0483960 9.9288696 10.7291682 3.6308015 10.3476137 NA 3.2157718 7.1346327 13.3052753 13.6278543 5.6080877 12.0356826 12.4963471 9.9167873 8.2546885 5.1543685 3.7600932 8.1563278 10.0518200 5.4381631 13.2923626 2.0902437 9.7129561 14.8285998 0.9527063 9.7928523 10.7324546 2.9527436 7.5436962 NA 14.8842377 8.8144424 3.4887849 7.2157698 -1.3692218 2.3312466 9.8481591 10.3790000 11.5214515 10.3325468 9.9138954 9.7709978 3.8402618 11.4262381 9.9834024 6.7906782 7.7931982 5.0231267 10.7906785 15.2922652 7.6733691 11.7212504 11.3699549 8.1621884 -1.3692218 1.6308248 7.4636968 8.9883592 11.1482305 -1.3692218 2.5376937 7.6080870 9.5233500 11.1913788 4.2455185 5.6531747 5.5376968 10.6251606 11.8180045 0.2157407 13.4843116 6.8353784 7.5644978 12.0793107 8.8390416 12.7114581 7.7703586 10.7096251 10.8557133 11.0364007 11.0327533 6.7030744 8.2800632 12.6529148 11.5877277 NA 10.6796346 8.9706573 2.4381598 3.0009735 9.7102919 10.5766167 10.2385998 8.9162094 14.7492413 10.6738345 9.5755192 8.1085652 0.2157407 16.4130183 4.7393297 13.9142935 12.2675450 9.9894584 9.5103903 7.9949417 10.2484950 0.00319100 0.00319100 0.00319100 0.00513590 0.00097064 -0.00144920 -0.00241230 0.00319100 0.00319100 -0.00263220 -0.00263220 -0.00263220 -0.00472930 -0.00263220 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 0.00047091 -0.00360110 -0.00360110 -0.00360110 -0.00069303 -0.00069303 -0.00069303 -0.00097017 -0.00276490 0.00319100 -0.01133600 0.00513590 -0.00144920 -0.00878950 -0.00241230 -0.00241230 0.00319100 0.00319100 0.00319100 -0.00166290 -0.00166290 -0.00263220 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00263220 -0.00375940 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 0.00047091 0.00027728 -0.00360110 -0.00360110 0.00000000 -0.00069303 -0.00069303 -0.00097017 -0.00912860 0.00104380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.6194915 11.6968963 8.4684351 8.4333234 2.8573242 11.5023274 0.2157407 -0.3692218 8.5195506 7.9069315 NA 5.2918724 NA 10.1597495 9.1415712 -1.3692218 4.8007343 9.2800634 13.4331216 10.6958867 9.6102538 7.8156824 10.7626641 3.7182739 10.7288392 9.7709978 3.1543726 -1.3692218 10.9176537 1.2157407 13.3070397 12.2700348 6.0486591 11.1269119 7.4154418 9.1815538 1.6308248 2.3312466 NA 8.4856756 9.4252230 10.3360075 9.3181828 0.6307782 7.6448275 6.5496707 10.5407003 2.5376937 9.4485902 0.2157407 12.6096070 1.9527436 9.7818238 9.9905183 7.3365083 NA 8.1326442 8.4841168 6.7022697 2.8007239 13.8827703 1.2157407 11.1234114 NA 9.3697439 3.5376937 7.8596261 9.5436965 14.228059 4.023122 8.593703 12.035683 10.377741 10.212949 13.292363 13.028281 9.258997 10.619492 12.855939 12.181434 8.988359 8.108565 1.800745 7.704949 11.119902 11.0150513 7.1266621 9.1034979 8.8475529 8.0401982 10.3552954 6.4573563 3.7600932 12.0483960 7.4605296 5.8787351 7.6779310 6.1196923 11.4035341 9.5965914 9.4224340 9.0454924 12.0756926 2.4381598 11.5214515 10.5714878 11.5220213 8.7792837 10.6123744 9.4284686 NA 9.5210107 6.2469154 1.2157407 11.1913788 5.0902395 10.7079566 10.6251606 6.9023631 14.4532784 10.2737613 10.3960932 13.2571436 10.0465489 9.8125805 0.6307782 TCGA-GM-A2DN 58 0 NA 2352 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2004 NA NA infiltrating ductal carcinoma yes 0 white not hispanic or latino 167.47.0 NA NA 2 5 NA NA 1 4 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.449823e-07 8.343418e-08 11.0001456 3.6253757 7.1914314 10.8336121 0.9473295 10.4071473 NA 9.3396233 11.5173513 11.0299872 9.4887897 7.8250504 7.2065788 9.2197024 7.3223455 9.8499825 10.2183019 9.5254899 7.5322686 4.7953046 10.5671590 10.7744898 12.5448929 11.3451944 9.6642967 10.2574642 8.1391052 10.4177614 -0.3746360 2.4327457 8.5337705 12.9083938 12.6842997 7.5969210 12.6658388 12.8480972 9.7681231 7.4197934 4.7953046 6.5080213 8.8565989 10.3052976 8.9718915 12.5518591 4.4067407 10.6632678 13.7147455 6.0262578 9.3135669 10.7194555 6.9291590 5.9473061 0.6253640 14.8872448 11.5498192 0.9473295 8.6505172 NA 6.4391593 9.6083715 9.8691469 8.8685519 11.1457509 10.2131553 9.9512454 3.1489341 10.7833562 9.9707831 6.2835885 8.8262764 4.5561167 10.4995907 15.0047392 7.5645748 10.4911110 11.1036418 10.6519013 2.7953098 5.2547339 8.8625878 8.4050972 11.8746394 1.2103265 6.1645369 7.4582680 10.1066727 11.2962553 5.6806591 7.4582680 4.8921627 9.3118784 12.0801912 2.6253874 13.4948271 6.6253772 7.7443185 12.8220568 13.0867293 12.8150479 7.8421234 10.4992064 10.9481510 10.8306273 10.5288831 4.0516418 8.7234098 12.0098918 11.5211424 NA 10.3013349 9.1192332 1.7953098 2.5351572 9.6303004 10.3706319 10.0241214 8.8189033 15.4564499 10.2173675 9.6281929 7.9061486 5.1172296 16.1141751 9.8980076 13.4055074 12.7022769 10.0230524 9.8697416 8.3532981 10.8490658 -0.00664320 0.74385000 0.74385000 0.00000000 0.00000000 -0.00040425 0.06694500 -0.00332430 -0.00332430 0.00833510 0.00833510 0.00833510 -0.00469480 0.00194180 -0.00360110 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.02589300 -0.00269790 0.00332990 -0.05361100 -0.05361100 -0.05361100 -0.00152430 -0.00152430 -0.00152430 -0.00069303 -0.00664320 -0.00664320 0.00083195 0.00000000 0.00750000 -0.00040425 0.06694500 0.06694500 -0.00332430 -0.00332430 -0.00332430 0.00055459 0.00055459 0.00833510 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00194180 -0.00354200 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.00152430 -0.02589300 -0.00269790 0.00332990 -0.35825000 -0.05361100 -0.05361100 0.00180300 -0.00152430 -0.00152430 -0.00069303 0.00249690 0.01586600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.6133523 12.3827678 7.2583729 9.3490388 3.2692277 11.6128195 0.2103889 -1.3744489 8.7814610 7.5531554 NA 7.0870204 2.9473108 10.2460558 9.5846553 2.4327457 9.0294548 9.7591622 9.7507912 9.9194241 9.6572995 6.8445463 11.2653968 3.9473015 10.0117792 9.9512454 3.4833644 NA 10.5479622 3.0848126 13.2279027 12.5655078 8.3344615 10.2884911 9.0610482 9.1847549 5.5442412 3.0848126 NA 7.6505176 8.4724350 10.0919641 10.0600060 4.0848126 8.8534630 6.8921639 9.8158199 6.1489402 9.8619899 NA 10.1011112 2.7953098 4.4582704 9.6274051 6.6065459 8.4067373 9.6393982 8.8384819 10.6680632 0.2103889 14.0136306 0.9473295 10.0273240 NA 9.0858336 4.6026588 7.7649293 8.6463578 12.617347 6.919999 8.612642 12.665839 10.449541 11.111459 12.551859 11.529824 9.229931 10.371052 13.543682 10.180926 8.405097 8.495742 -1.374449 7.413280 10.975488 10.924013 6.567892 9.171308 9.083784 9.017695 10.039593 7.849379 6.567892 11.345194 9.188574 1.947292 7.432732 7.597352 12.568076 10.489951 8.702193 8.761087 11.341769 7.965228 8.868552 10.693484 10.691130 9.876268 10.428298 8.405097 5.195233 9.737895 8.852994 9.718135 11.296255 7.376922 11.116792 9.311878 7.243763 14.196034 10.158221 10.805909 13.035829 10.813658 9.301335 4.854195 TCGA-GM-A2DO 54 0 NA 1623 breast stage i t1c n0 (i-) m0 2-10-2014 female 2006 NA NA infiltrating lobular carcinoma yes 0 black or african american not hispanic or latino 177.46.0 NA NA 2 5 NA NA 1 3 1 3 5 2 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 2.39363e-06 6.938058e-07 10.5152886 2.9770967 7.2532244 11.3613437 NA 11.1700088 0.9770967 9.1115259 11.1835035 11.6762382 9.6028085 8.0323819 7.5770126 8.8597426 6.7715159 10.1217578 9.5881243 10.3737044 9.0296677 3.8839922 12.2184870 9.1669240 12.1160113 11.0816983 9.7485890 10.3949521 9.6406576 9.6618483 -0.0228300 1.5620836 8.9657843 9.9298408 12.2350766 5.3346505 12.1868576 11.6486407 8.5620623 7.4200427 5.3694176 5.5918081 9.3629621 6.9657843 7.1865530 11.3618834 1.7298355 11.5774772 13.2275461 1.9770967 10.3379466 10.3324507 6.9428839 3.1470299 2.2990395 15.5390402 14.0594982 2.7844621 8.2532240 -0.0228300 5.8839898 9.2202736 9.6317357 10.2415422 11.9022831 9.8131500 10.3357508 6.8474646 10.4169305 10.6335245 7.2344879 7.3346514 10.5611226 10.4283108 14.1449097 7.5055146 10.8635583 10.2131138 9.9428839 0.9770967 -0.0228300 9.1063826 8.1914185 11.4923066 NA 4.3694176 7.0751315 11.1319177 10.8115707 6.6636008 9.0160185 4.3694176 10.0738147 12.3461516 5.6495264 13.4760734 5.5620623 7.9196142 11.4809253 11.1230318 13.2942295 7.7185664 9.8036481 10.6415468 10.3618834 10.0790753 3.8839922 9.1319177 11.5601823 10.7788080 1.5620836 10.2590296 9.1594940 1.9770967 4.8680348 9.9813201 10.7666333 10.4578898 8.7252923 14.7165111 11.0452061 10.4918136 9.5123751 0.9770967 14.7117034 6.9543790 12.4370434 12.5381488 9.6046335 9.9078369 7.5844297 9.5995358 0.00000000 0.00000000 0.00000000 -0.00539920 -0.00083160 -0.00332430 0.02595200 -0.00332430 -0.00332430 1.58930000 -0.01945200 0.34762000 0.00152550 -0.00758210 -0.00429290 1.69250000 -0.15733000 0.00332990 0.00332990 -0.01270000 0.00027728 0.00527490 0.01063600 0.01063600 0.13243000 -0.00041585 -0.00041585 -0.00041585 0.02567100 0.00000000 0.00000000 0.00166420 -0.00083160 -0.00802440 -0.00332430 0.02595200 0.02595200 -0.00332430 -0.00332430 -0.00332430 0.00041593 -0.00134140 -0.21251000 -0.00346270 -0.00346270 -0.00346270 -0.00346270 -0.00758210 -0.00758210 -0.00429290 -0.15733000 0.00332990 -0.00166290 -0.00166290 -0.00490570 0.00027728 0.00527490 -0.19843000 0.01063600 0.01063600 0.00235810 -0.00041585 -0.00041585 0.02567100 -0.02876500 0.02230400 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 11.2232464 11.5065301 7.3258280 8.6281513 8.7185664 10.8428329 8.5507468 NA 8.7779996 5.8839898 -0.0228300 6.1470237 -0.0228300 10.2717204 9.8854922 3.1470299 11.0001608 8.3991643 8.0269483 10.3672685 9.1086478 6.9657843 9.5201315 2.2990395 8.3213956 10.3357508 2.5620592 NA 11.2374311 4.1470217 13.4049362 12.0492322 7.2990276 9.7988735 10.7518866 9.3236133 3.9770967 6.1669243 NA 0.9770967 8.8036481 10.2047155 9.1166509 1.9770967 7.7072639 7.2250271 10.1012209 4.5006619 9.2601880 -0.0228300 9.1012209 3.9770967 6.7452844 9.3433125 6.0732354 10.9636527 10.3586425 9.0645625 10.6146302 NA 14.3032482 2.5620592 10.3313489 NA 8.4158913 4.0645639 7.7319869 8.1619748 13.9380219 6.3864902 9.5825791 12.1868576 11.0559175 9.8428329 11.3618834 11.4923066 9.2740158 10.1495271 12.8555337 9.2717203 8.1914185 8.3258276 0.9770967 7.8779663 10.6939191 10.745284 5.931295 8.698199 9.083008 8.577013 9.776235 10.284300 7.937101 11.081698 6.988327 2.562059 4.225028 8.884381 8.531688 11.813150 8.898941 9.763369 10.220274 9.388611 10.241542 11.012586 10.947924 9.430370 10.413811 6.403365 NA 10.087139 7.554528 11.103159 10.811571 5.262501 11.465442 10.073815 7.280880 14.288351 10.135709 10.589047 11.936377 11.158873 10.523994 3.883992 TCGA-GM-A3NW 63 0 NA 3361 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2003 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 227.33.0 NA NA 3 3 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.446192e-06 4.449823e-07 10.9150535 6.2985483 6.9604434 11.6279072 1.5638415 9.9726985 -0.4361585 9.3002400 10.9835351 10.1217805 9.8538571 7.2397952 8.6231825 10.2494630 8.4249250 8.7425031 10.9084115 8.9974237 6.4464812 1.5638415 10.8129516 10.5546512 9.4804641 11.3429419 8.6736688 10.0601927 6.0556902 10.0581938 -0.4361585 2.3711964 7.2985474 11.5493244 12.3663545 7.3582538 13.5014878 12.3827199 8.9421330 5.3320240 0.5638415 6.2004632 8.5454055 7.6000117 7.2291745 12.3959370 -1.4363537 9.5019474 14.0037015 4.6931189 10.3414100 10.7218166 7.7161232 7.3872057 NA 14.1757047 9.2335648 NA 8.9604431 NA 2.8857696 9.2840824 9.6645004 10.1757851 11.1141040 10.0869099 10.3480641 2.9561496 10.4942059 10.2300621 6.6082326 7.7926569 5.6082326 10.5907074 14.3885732 7.1807178 11.2655778 10.6995475 7.5468320 -0.4361585 7.1107328 6.1260808 8.2968534 10.3887969 -1.4363537 3.0873949 7.0516777 9.9932450 10.4108955 4.2917583 5.3053066 3.5638415 9.4975287 12.0300421 3.8492387 13.0698357 5.3320240 8.0456374 12.1790080 11.0947322 12.4204582 8.3386254 10.5339441 10.6866661 10.4258865 9.8253455 4.3711964 8.4510586 10.9122897 11.6863426 NA 10.2031789 8.7387638 0.1487389 3.7345687 9.1412670 10.1236932 9.9561556 8.5848182 14.9449924 10.5809945 9.0903374 8.3369773 2.7337665 16.3024912 8.4418893 11.7764865 11.7030697 9.3036187 9.2121958 7.5806468 10.7968556 -0.32383000 0.87740000 0.87740000 -0.00267940 -0.01913400 -0.01840000 0.59056000 0.00481050 -0.02045900 3.65690000 1.60590000 -0.01771300 0.01288700 0.01284100 0.00606160 3.65690000 3.65690000 -0.00018588 -0.00018588 0.62327000 0.00425480 0.02548300 0.04183400 0.02868300 0.02868300 0.03096600 0.03096600 0.03096600 0.03716900 -0.32383000 -0.32383000 -0.00599930 -0.33414000 -0.01413700 -0.03306500 0.58411000 0.58411000 0.00481050 -0.02045900 -0.02045900 -0.01179600 -0.01179600 -0.67657000 0.00000000 0.01205000 0.01205000 0.01205000 0.01284100 0.01284100 0.00606160 -0.64775000 -0.00018588 -0.00018588 -0.00018588 -0.65373000 0.00425480 0.02548300 -0.64621000 0.04183400 0.02868300 -0.01338300 0.03096600 0.03096600 0.03716900 0.00032733 0.05091200 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 8.3086721 11.1945603 6.1260808 9.6473176 3.9047538 11.7916045 2.5638415 -1.4363537 9.1506780 8.6618704 NA 7.0800895 3.3711964 9.9953358 9.5645424 2.2642662 8.3887970 9.1922837 10.8871745 11.3814214 9.5271317 7.1785483 10.3788211 1.7337448 8.2900562 10.3480641 4.8306255 NA 10.3513326 3.8117690 11.9982058 11.6253781 7.4737309 10.4541025 8.3468364 9.9372471 1.7337448 0.1487389 NA 6.7487135 9.5875925 9.5910531 10.5938155 5.1487999 8.3585303 8.3086721 10.8431585 5.8584585 9.6697466 -1.4363537 11.2146655 4.5638354 5.6191195 9.7605264 7.5069978 3.0873949 9.7610548 7.8880187 9.2900564 -1.4363537 14.0678812 0.5638415 10.5830814 NA 6.6565950 5.0395727 8.1165072 9.3460175 14.317573 5.494576 9.016080 13.501488 10.453342 11.199330 12.395937 11.240456 11.004458 9.790250 13.265470 11.226729 8.296853 9.746232 1.148804 7.738764 10.805226 10.8303319 6.9561554 8.1986493 9.4556219 7.8022430 10.0526223 6.8721774 7.4945756 11.3429419 7.6486466 0.5638415 4.8676198 7.1368035 10.4148064 9.3128696 7.9095979 9.3927680 11.6819681 4.6082297 10.1757851 10.8506847 11.3406824 9.3237263 10.3517407 7.5238403 -1.4363537 9.0225626 6.9421767 5.5411183 10.4108955 4.6512986 11.1251261 9.4975287 7.0834740 13.6424468 9.7293733 10.1208231 12.5528778 10.2819429 9.3998884 -0.4361585 TCGA-GM-A3NY 72 0 NA 1162 breast stage iib t2 n1a m0 2-10-2014 female 2009 NA NA infiltrating lobular carcinoma yes 1 white not hispanic or latino 216.36.0 NA NA 2 4 NA NA 3 4 3 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.080378e-07 2.280142e-07 10.0559215 5.3783209 7.9871287 11.0664530 NA 11.1283004 1.0563754 8.7625993 10.5130878 10.9585150 9.1269594 8.2544268 8.9329080 8.4629505 7.7169813 9.8712407 10.5089757 10.0202506 7.8486392 1.0563754 12.5289974 9.4742438 9.6494710 11.3982806 9.9086606 10.0269765 5.7752086 10.3846921 1.9308509 3.6007098 6.0488574 12.3748399 12.5489955 6.7098338 12.6733994 13.0714577 9.1296400 7.9612766 2.8637403 6.3540713 9.2246454 10.9816983 7.9451342 13.3431414 1.2787579 12.3645406 14.6703724 7.3137791 11.0067405 10.4633048 6.9712745 7.0144602 -1.5286564 14.0315737 8.1666572 0.4714476 6.3601711 -0.5286564 4.8637452 8.9018812 9.8223678 10.6912022 12.3489046 10.0824535 9.4833547 1.4714476 10.5622027 10.5760275 8.4429721 8.2593313 12.8443617 11.2783810 13.7328993 7.7233135 11.8962511 10.6309847 8.2379575 1.4714476 0.4714476 9.1683961 7.6186336 12.2095209 NA 5.2658457 7.2884121 9.2313170 10.7425999 4.1718713 5.1438546 3.6808869 10.6550640 12.0868284 3.5158260 12.6842290 7.4080664 7.7098338 12.0341481 11.2290270 13.0914193 8.3433341 10.3925258 10.6902946 10.4165066 9.9925383 1.9308509 9.5280665 11.4569149 10.3180943 -0.5286564 9.9380151 8.3417932 3.0563928 4.7777616 8.7899714 11.2431245 10.2916076 8.8924414 14.8974968 9.8610601 9.5062276 10.1211339 1.9308509 14.5806064 10.2023233 13.6374615 11.8650873 9.7803365 10.4554910 8.2932026 10.2154593 0.3390100 1.1703000 1.1919000 0.0041632 -0.0071326 -0.0090362 -0.0016629 0.0024366 -0.0078863 -0.0013858 -0.0013858 -0.0013858 0.0125160 0.0125160 0.0108420 0.0072622 0.0072622 0.0037465 0.0037465 -0.0033912 0.0081959 0.0165650 0.0227250 0.0227250 0.0227250 0.0310140 0.0310140 0.0310140 0.0171240 0.0379240 -0.6972100 0.0148880 -0.6707600 0.0086135 -0.0090362 -0.0016629 -0.0016629 0.0024366 -0.0078863 -0.0078863 0.0000000 0.0000000 -0.0013858 0.0118180 0.0118180 0.0118180 0.0118180 0.0125160 0.0195030 0.0108420 0.0072622 0.0037465 -0.6819500 -0.6819500 -0.0011300 0.0081959 0.0165650 -0.6759100 0.0227250 0.0227250 0.0094491 0.0310140 0.0310140 0.0171240 0.0088920 -0.6587300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7899714 11.4540658 2.2787877 9.6419796 3.7505315 10.4386550 1.6413611 -1.5286564 8.8626724 7.6211757 -1.5286564 7.2363003 3.6413495 10.3854400 10.0327166 3.6808869 8.5509134 9.1287471 10.6316153 11.6852923 9.4523181 7.7614475 10.9945005 2.6413611 8.7809052 9.4833547 3.2787877 NA 10.3973540 4.0563928 13.1072601 12.2921063 7.9102206 9.6300385 7.9308603 9.9692805 5.2527865 2.4714216 2.3783174 8.8976933 8.5562370 11.9771162 10.7481347 6.4601135 8.8820604 8.1544232 10.5459047 5.8976930 9.2536078 -1.5286564 10.7660494 0.4714476 5.1007843 9.6784308 6.7095939 5.3417937 8.4615327 7.2296523 8.4314307 NA 14.4075605 1.9308509 10.0341482 -0.5286564 9.2137380 6.2979764 8.0731995 8.5707764 12.251547 5.738214 8.895595 12.673399 11.062568 11.193809 13.343141 12.319269 8.706988 9.955748 13.470548 9.180512 7.618634 9.480557 1.641361 7.323177 10.568802 10.910221 4.471428 8.294796 8.134987 7.360172 10.509682 6.661254 9.580606 11.398281 7.422713 2.056375 6.846468 7.319707 10.193809 10.369274 7.226316 10.187819 7.775209 5.671101 10.691202 10.876038 10.658162 9.270710 10.263405 7.219622 NA 9.912926 6.630745 6.185674 10.742600 5.775209 10.903971 10.655064 7.983181 13.902143 10.374181 10.943866 12.645808 11.593124 10.177493 2.278788 TCGA-GM-A3XG 46 0 NA 1330 breast stage iiia t3 n1a m0 2-10-2014 female 2009 NA yes infiltrating lobular carcinoma yes 3 white not hispanic or latino 255.29.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 0 11.353786 6.701873 6.632927 11.482184 1.058039 9.602982 NA 8.547196 10.971405 11.060832 9.208611 7.080385 8.264218 9.860534 7.845920 8.842652 9.989247 9.617713 8.072968 2.996624 11.653430 10.783384 13.485461 10.842107 9.531723 10.331036 4.473053 9.972402 1.642979 3.331032 6.632927 13.797868 13.037204 8.136613 13.477758 12.190196 10.761921 8.344960 5.131264 7.737497 8.999554 10.383323 10.002973 12.068895 2.280422 10.873401 13.180845 7.444598 10.222547 10.043859 7.799484 3.517452 NA 13.397779 7.774551 3.379940 8.133051 NA 2.996624 9.282823 9.160430 9.783100 10.984560 9.154293 11.054491 2.996624 10.260141 10.085463 7.241240 6.808446 10.120063 11.259937 14.885889 6.251920 10.259733 10.440281 7.200975 2.720979 5.890906 8.192444 8.433057 12.567462 NA 3.058022 7.138391 9.427251 11.063408 12.618828 4.915999 2.996624 9.531723 12.114655 4.882447 13.466037 6.586796 7.689801 12.367967 12.522648 12.278194 9.242893 10.898795 10.839923 10.620896 10.191160 2.379954 9.507854 11.311077 10.803412 NA 10.235852 8.649228 1.794977 4.454676 9.359513 10.927611 9.830057 8.834999 15.367707 9.940660 8.677626 7.725720 6.012213 15.510870 9.907683 12.584761 13.091268 9.804532 10.225435 6.772263 9.765520 0.02806000 0.02806000 0.02806000 0.00069327 0.00069327 -0.00166290 0.00074373 -0.00912860 -0.00912860 0.00027728 0.00027728 -0.00321270 0.00208050 0.00208050 0.00069327 0.00069327 0.00069327 -0.00263220 -0.00263220 0.00000000 -0.00124730 -0.00207840 0.00152550 0.00152550 0.00152550 -0.00387790 -0.00290910 -0.00290910 0.00027728 0.02806000 0.02806000 -0.00033633 0.00069327 -0.00166290 -0.00166290 0.00074373 0.00074373 -0.00912860 -0.00912860 -0.05855300 -0.00207840 -0.00207840 0.00027728 -0.02520900 -0.02520900 -0.02520900 -0.02520900 0.00208050 0.00208050 0.00069327 0.00069327 -0.00263220 -0.01656700 -0.01656700 0.00000000 -0.00124730 -0.00207840 -0.03449500 0.00152550 0.00152550 -0.00332430 -0.00387790 -0.00290910 0.00027728 0.01042400 -0.01216200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.19586233 12.24330575 6.47867903 10.28000712 2.14323013 10.90820413 1.28042188 1.28042188 9.31697589 8.81735081 0.47300757 7.07296756 3.22794127 10.11826290 9.67762593 2.79497724 7.28362643 9.52290338 10.06130098 11.23294299 9.44265721 6.83937766 11.99281392 0.05797007 9.61835008 11.05449084 8.68250834 -1.52699243 10.00492366 5.99661697 13.79874676 12.42943099 8.66781160 10.14371100 7.81290505 9.93606826 5.11690949 2.05800472 -1.52699243 1.64297876 9.69403762 10.67334044 9.46244931 6.29323436 9.80569003 7.85459789 10.52528324 4.94878771 10.09327467 2.05800472 11.37862986 1.93247698 5.36787424 9.41236216 5.99135404 2.37995360 8.87393436 6.65793006 7.67762593 -1.52699243 14.59566041 -0.52699243 11.15626874 NA 8.02187666 6.04291132 7.85675916 8.52969252 11.641913 4.948788 8.741012 13.477758 10.291637 10.602338 12.068895 11.604912 8.890971 9.969909 12.969846 11.479556 8.433057 8.599759 1.280422 7.687374 10.022840 10.746268 6.544518 8.894068 8.857839 6.706674 10.009224 5.767676 7.421422 10.842107 6.662879 1.794977 10.098764 6.151972 11.076217 9.951824 8.597176 10.378066 7.152535 2.932496 9.783100 10.500961 10.486028 9.152535 10.120513 7.176958 NA 9.357431 7.388934 6.200975 11.063408 3.379940 11.081772 9.531723 6.489862 15.124947 10.506134 10.681289 12.426797 10.845376 9.485679 1.280422 TCGA-GM-A3XL 49 0 NA 2108 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2007 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 234.26.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1.724306e-06 3.615481e-07 12.71565082 -1.53073915 6.35207345 11.95324556 NA 8.36878668 -1.53073915 8.79361046 10.84501231 9.41925656 8.65554396 6.22431816 8.07676003 10.17678888 7.79361046 8.95021993 7.78910191 10.45775946 8.48205445 9.14008612 10.41597062 12.69388375 12.61416770 10.42544283 11.08275886 10.06655126 7.17333335 10.32039791 1.27679440 2.05439702 7.38530937 9.44240964 11.66879543 8.29438870 11.20709963 10.83274329 10.90144965 7.15593033 3.59871059 8.50834862 8.06561970 5.05439268 8.55024733 4.02401820 NA 11.58056545 11.28521332 8.55954229 9.13511208 10.54189743 7.27356065 6.98118251 2.63934794 14.50561307 10.89200449 NA 8.34441132 -1.53073915 5.59871357 9.70304947 10.18881864 8.62298195 8.53012577 8.97623330 9.98955728 0.79135567 11.86335647 10.34863013 6.62930124 8.20752198 2.37631817 8.24421682 14.62470263 7.81627586 9.75771918 9.83575200 9.18967411 2.16986088 -1.53073915 8.10424072 8.23430156 11.30113290 -1.53073915 1.63937110 7.95525932 11.76405055 8.16986940 4.71735838 7.78910191 5.92886061 7.05063012 11.96765572 0.79135567 13.21631147 6.98512923 6.77321043 10.51108896 13.39665219 12.14978931 5.72681760 10.71022115 10.71795037 10.49845473 9.63433679 3.37631817 9.46095159 12.06631836 7.69824835 NA 11.33632233 8.68738758 0.05436229 3.20277815 8.87137579 11.79656138 9.67522298 9.26952085 15.28069159 11.02497756 9.50903427 6.84011700 NA 12.37171069 7.91857825 11.85717788 12.24184748 9.09422525 8.79585914 7.35817293 10.44006062 -0.044822 0.854820 0.758150 0.696520 0.355610 0.098387 0.634450 -0.290450 0.182680 -0.517020 -0.517020 0.786590 0.980390 0.228700 -0.101320 0.428560 0.354520 0.267650 0.064654 -0.058032 -0.495800 -0.472830 -0.486800 -0.486130 1.234000 -0.094196 -0.066654 -0.092983 0.143250 -0.645560 -0.044822 0.344530 -0.497980 -0.518050 -0.503260 -0.633200 -0.119650 -0.849390 0.182680 -1.292900 -0.521180 0.297870 -0.517020 0.360190 0.232700 0.232700 0.146460 -0.997850 -0.498190 -0.101320 -0.500580 0.196950 -0.489950 -0.489950 -0.518050 -0.478920 -0.488580 0.050534 -0.486800 0.013911 0.973580 0.420490 -0.092983 -0.838090 -0.020001 -0.184330 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.508 -0.462 -0.262 -0.262 -0.212 0.275 0.111 0.111 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.107 0.233 0.233 -0.032 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.508 -0.462 -0.262 -0.262 -0.212 0.275 0.111 0.111 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.107 0.233 0.233 -0.032 7.92064107 11.64123207 2.55689532 6.92886180 3.24447611 10.90692178 2.79135567 -0.53053075 9.54891455 8.41047722 1.63937110 7.30863391 5.83575231 10.67002194 10.03975995 5.00858997 4.89569524 8.98217021 7.00081129 10.07676016 8.91569627 5.77321043 10.16030080 2.16986088 7.17678850 9.98955728 2.46941715 NA 10.49940713 2.92886298 13.04213002 11.97114259 6.17678950 9.79642092 11.19798810 10.87430524 4.71735838 1.92884404 0.05436229 -0.53053075 9.92629748 10.16465808 6.09878588 NA 8.64433040 9.30784584 10.53988618 4.44671279 10.15022887 2.37631817 11.76448122 4.73621520 4.46943018 9.23171224 7.66912671 7.30547994 8.58317192 7.60642076 10.10514795 5.16986890 14.22212404 -0.53053075 11.61568025 NA 8.38231925 2.63934794 7.96728160 8.93805374 10.217992 9.798666 8.131208 11.207100 9.715577 12.137428 4.024018 5.953247 8.937035 10.618859 13.512842 12.591530 8.234302 9.070272 6.619177 8.347481 10.070272 11.132765 2.791356 8.234302 8.058144 4.513825 9.818661 7.745554 4.327414 10.425443 11.510747 -1.530739 7.676444 10.589091 10.701251 11.084830 7.624248 10.932699 6.508349 6.183675 8.622982 10.237614 9.869776 10.318444 10.569435 7.250789 NA 9.630524 5.630207 8.556893 8.169869 5.352073 11.565784 7.050630 8.071312 14.184775 10.657400 10.502853 12.706490 12.007497 9.177651 5.327411 TCGA-GM-A3XN 44 0 NA 2019 breast stage iiia t1c n2a m0 2-10-2014 female 2007 NA yes infiltrating lobular carcinoma yes 5 white not hispanic or latino 234.26.0 NA NA 2 4 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 3.059253e-07 1.39057e-07 10.65126054 8.71112180 6.24003760 11.47255463 3.20576784 10.20923195 -1.49451552 9.22984216 11.51742910 10.89388388 9.67400048 8.26521652 9.11358330 9.55789635 6.67525280 9.37492232 10.51550678 9.61646412 8.01708120 3.20576784 12.39938825 10.73744949 9.62297152 11.29730521 9.38797142 10.09169904 6.37569284 10.12233662 1.31266517 4.05991764 8.79188601 12.32978998 12.41212506 8.07518389 12.54647415 12.25603536 10.72207422 7.27351309 4.09029453 8.01510334 8.67900569 9.17952075 8.50391874 12.50576859 2.96476827 11.30784475 13.63142785 5.53875232 10.01905108 10.21182443 9.60992723 8.07708114 1.09031147 14.39352534 9.24342060 2.59277993 8.57679080 1.09031147 5.29974286 9.07897562 9.76624796 9.92634122 10.70622697 9.49401312 10.19619944 3.02888736 10.92291720 10.64743540 8.01905580 7.93995644 4.77211263 9.70745214 14.73277512 8.40744708 10.81792778 10.47399517 8.23494912 2.50533203 0.09031147 9.08747027 8.49117046 11.95756964 -1.49451552 5.19182713 7.68523727 9.86507796 10.70223780 5.58214349 6.03670992 5.13468506 9.89764582 11.79390612 3.75325152 13.53228402 6.60336078 7.19182910 12.72457256 12.92568341 12.53340712 8.84517827 10.26895574 10.59444778 10.41361217 10.69946965 4.23325153 9.23069466 11.37723364 10.58514649 0.09031147 10.62362063 8.79419457 1.67527397 4.52813995 8.89442188 11.05463179 9.88578940 8.80224460 14.80661022 10.29608418 8.94308033 8.88362326 2.67525139 14.16013221 10.09731819 13.63396720 12.76028316 9.90353770 9.94827188 8.02692894 10.61709007 0.00499690 0.67233000 0.67586000 -0.00857660 -0.00857660 -0.01395300 0.34655000 -0.01862800 -0.37628000 -0.00788630 -0.00788630 -0.00788630 -0.00018746 0.00041593 0.00110930 0.00110930 0.00047180 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00000000 0.01140000 0.01140000 0.01140000 0.01908300 0.01908300 0.01908300 0.00958830 0.00499690 0.00499690 -0.01087400 -0.00857660 -0.01395300 -0.01395300 0.34655000 0.34655000 -0.01862800 -0.36488000 -0.37628000 0.33448000 0.33448000 -0.00788630 0.00110930 0.00110930 0.00110930 0.00110930 0.00041593 0.00041593 0.00110930 0.00047180 -0.04495700 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00000000 -0.34710000 0.01140000 0.01140000 -0.00055444 0.01908300 0.01908300 0.00958830 0.00555290 -0.32147000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 9.5003888 13.7870773 7.7953475 10.6871018 4.6138558 10.8368052 3.5497185 1.9647683 9.4833238 9.7884167 -1.4945155 7.9977023 5.8362448 9.6651996 9.9383921 3.3126797 9.3191096 9.4152214 9.0959155 10.5707445 9.6356222 7.0483604 12.4189658 2.6752514 8.7918860 10.1961994 5.4001451 NA 10.8507336 4.0288874 13.2475852 12.1705533 8.7269157 9.5193489 9.5639966 9.4783081 4.3879691 2.2057678 -0.4947188 8.5619661 8.7662480 9.8656269 8.7025450 7.1671060 9.1506264 7.1918291 10.3358436 5.5276959 9.3126833 -1.4945155 11.7760617 2.5053320 5.0131228 9.6257218 6.8300487 5.6138528 10.1905152 8.3864424 8.4996817 0.8272500 14.0268061 0.5052812 10.3590278 -1.4945155 8.5483557 5.8091083 7.4566132 8.4754343 12.340858 5.459523 8.394072 12.546474 10.444687 10.430141 12.505769 12.072809 8.996029 10.250162 13.540729 11.817219 8.491170 8.863980 3.312680 7.391024 10.659197 11.288531 6.198816 8.794183 8.688964 7.439019 10.283451 7.494013 8.815941 11.297305 6.430141 3.897647 6.400147 6.662624 11.093340 10.255617 7.776792 9.551770 10.593454 6.306228 9.926341 10.599736 10.589472 10.711732 10.562982 8.336636 NA 9.634277 7.162075 7.797650 10.702238 6.914719 11.254003 9.897646 7.296491 14.341699 10.136505 10.566362 12.704694 11.239403 9.880911 2.592780 TCGA-GM-A4E0 67 0 NA 2191 breast stage iiic t3 n3a m0 2-10-2014 female 2007 NA yes infiltrating lobular carcinoma yes 10 white not hispanic or latino 271.28.0 NA NA 2 5 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.893595e-07 1.112456e-07 10.7602413 9.5628766 6.7639015 11.4844462 5.5768154 10.0926370 -0.4455585 9.0780101 10.8369574 11.0092614 9.4807442 7.8673313 8.8259112 9.4108736 7.2755472 9.2126596 9.1166904 9.8831230 8.8582288 5.1394122 11.8845246 10.6292585 8.9617159 10.9059395 9.5331586 10.0799688 7.0622426 9.6978313 1.1394040 2.3617964 9.5360154 12.0610036 12.7907613 8.2374428 12.3026409 11.5456156 10.0015313 6.3873384 0.5544415 8.0858293 9.1469052 8.7442728 7.5144497 11.5140878 0.5544415 11.5169827 12.9864679 5.4370912 10.0868041 8.9273131 10.9081463 3.1394040 NA 13.9547692 11.7592943 4.3093363 7.7041955 NA 4.1394122 8.8305726 9.7455073 9.2857670 10.1792436 9.4416688 10.4777756 4.1983056 10.7231202 10.2635319 5.5544476 7.1910730 5.4613386 10.3849633 15.0841226 6.7197571 9.9765129 10.4186342 8.7784498 1.1394040 NA 8.7614625 8.2652545 11.3022215 NA 2.7243665 7.3936522 10.3521097 11.1557546 5.1090387 6.7736166 4.5086442 10.5459699 11.6646051 3.5544538 13.6273343 5.1691594 8.3126711 10.8718607 11.7029247 12.4089269 8.3456110 9.6352656 10.6225546 10.4590827 10.3553480 3.5544538 9.1205020 11.1974023 8.5544480 1.8763696 10.8831230 8.5988423 NA 4.0780120 9.2823684 10.2729809 9.9911596 8.2479351 15.3024837 10.3068288 9.1673165 8.6629724 4.9807108 14.4429060 9.6205373 13.7859693 13.0551655 9.6232264 9.8317356 7.6733889 9.7293738 0.17860000 0.17860000 0.17860000 0.00388540 0.00388540 -0.00816240 0.00000000 -0.05050600 -0.05050600 0.00944910 0.00944910 -0.00367450 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00930980 0.00016184 0.00016184 0.02468900 0.00944910 0.01684500 -0.05428600 -0.05428600 -0.05428600 0.02272500 0.02272500 0.02397000 0.02679500 -0.23859000 0.17860000 -0.25484000 0.00388540 -0.00816240 -0.00816240 0.00000000 0.00000000 -0.05050600 -0.05050600 -0.05050600 -0.00539920 0.00097064 0.00944910 0.26451000 0.26451000 -0.26384000 0.02974700 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00016184 0.00016184 0.01922300 -0.00522210 0.00944910 0.01684500 -0.25596000 -0.05428600 -0.05428600 0.00736090 0.02272500 0.02397000 0.01118800 -0.27224000 -0.24192000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 9.5754281 12.3889191 6.0138798 10.7958354 3.4613452 10.6365972 2.5544415 4.9119983 9.0240900 10.1099958 -0.4455585 8.9991110 7.2891576 9.1071171 9.5013543 3.0138731 10.1013425 9.5259917 9.4522936 9.8673311 9.1991877 7.0382639 13.1525006 4.4124293 7.4370912 10.4777756 5.2548888 NA 11.2592163 4.0138821 13.1252525 11.8185974 9.2600805 10.2635319 9.6629725 9.5572630 3.3617964 1.1394040 NA 0.5544415 8.7856692 10.2772557 9.3374462 8.9680761 8.1790243 7.4613386 9.6939995 5.0780120 9.1691579 0.5544415 11.4515372 2.8763696 5.8582297 8.9850262 6.6579458 4.1394122 10.3650197 9.4538050 8.0422881 2.1394040 13.8268592 NA 10.4620899 NA 8.1506379 7.8118358 7.5712566 9.0322064 12.4739949 4.4613386 8.6965552 12.3026409 10.1243037 10.0025644 11.5140878 11.1280953 8.6247300 9.9185827 13.3606956 11.4298135 8.2652545 7.7832667 -0.4455585 7.0858293 10.3698313 11.278109 5.485185 9.013880 8.139411 6.754121 9.692899 8.612440 8.788068 10.905939 7.821234 1.876370 7.835219 5.810137 10.343982 10.746124 7.835219 9.607016 9.348864 5.461339 9.285767 10.749820 11.061251 10.499160 10.607016 7.571257 NA 9.735451 7.342350 5.763900 11.155755 5.876377 11.169618 10.545970 6.724373 14.270464 9.674686 10.780258 12.416504 10.647866 9.738083 3.641916 TCGA-GM-A5PV 63 0 NA 412 breast stage iib t2 n1a m0 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 1 white not hispanic or latino 296.27.0 NA NA 2 2 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.112456e-07 10.7041216 4.7523204 7.5657266 11.8058493 -0.3351531 9.7430107 NA 9.0024817 11.0960962 10.7379971 9.3487317 7.5747532 8.5290459 9.0377248 8.9467899 9.0268037 10.6602736 9.1365349 6.8888613 2.8347921 10.6284784 10.2526373 10.6574441 10.8879565 9.4071692 10.1889117 5.6073747 9.8404094 NA 1.2498094 6.7992855 11.6567359 12.9110808 5.9686415 13.4406244 12.7500003 9.8050506 6.9502619 3.7523204 5.4722148 8.2960370 9.6081071 7.3230710 13.2780737 0.9868114 11.1405932 14.1178731 6.5777491 10.2294762 10.8954807 8.2960370 5.8347845 NA 14.1154915 9.7863933 0.6648469 7.9957768 NA 2.3653006 9.1385654 9.4122135 10.0235110 11.3853178 9.3032958 9.9800093 2.8347921 10.2689497 9.6975944 7.0355469 7.3266380 12.0066566 11.9860833 13.8786475 5.8375876 10.9363228 10.3765268 8.2194488 1.2498094 4.7092520 7.0911243 7.8044111 11.0614646 NA 2.6648696 7.1201871 9.2261477 10.4109541 6.6478527 4.9316452 4.1567121 10.0268035 11.6042553 1.4722278 13.3305288 7.2040184 7.3893741 11.4592757 11.9478034 12.2160874 8.0636032 10.3991460 10.7010334 10.7041696 9.8966810 2.9127840 9.2165681 11.6738136 11.5438686 1.8347921 10.0393560 8.6676747 -0.3351531 3.1884168 9.2978549 10.8813025 9.5313661 8.5941182 14.5701293 9.6000248 9.6414239 8.2498222 3.9867841 16.4783091 9.3399346 12.8949553 12.5591092 9.7336380 9.8253616 7.5657266 10.1119430 -0.00180140 0.11538000 0.15233000 -0.00843850 -0.00843850 -0.01188700 0.12049000 -0.07761100 -0.07761100 -0.51948000 -0.51948000 0.23814000 0.01447000 0.01447000 -0.06740200 -0.06740200 -0.06740200 -0.00857660 -0.00857660 -0.01106000 0.00208050 0.00680440 0.00930980 0.00930980 0.00930980 0.01028500 0.01028500 0.01028500 0.01460900 -0.00180140 -0.00180140 0.00000000 -0.00843850 -0.01384400 -0.01188700 0.12049000 0.12049000 -0.07761100 -0.07761100 -0.07761100 -0.00470790 -0.00470790 -0.51948000 -0.00013862 -0.00013862 -0.00013862 0.00906580 0.01447000 0.01447000 0.01391600 -0.06740200 -0.00857660 0.00055459 0.00055459 -0.01106000 0.00208050 0.00680440 -0.63026000 0.00930980 0.00930980 0.00263570 0.01028500 0.01028500 0.01460900 0.00305220 0.02440800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 8.0355469 11.3377271 6.6248612 9.2460603 4.1567121 10.6471404 0.9868114 1.2498094 8.9020697 8.2040184 0.6648469 6.2721893 3.0571730 10.2969463 9.3328583 -1.3349711 6.3859590 8.6690803 10.0398992 11.6106694 9.4083731 6.5290463 10.0035962 1.7556995 9.6161445 9.9800093 6.6760868 -0.3351531 10.3880940 3.7092575 13.4722147 12.5479803 6.8888613 10.5115255 8.0550286 9.7733842 2.6648696 2.2498094 0.2498700 4.0571730 9.8429022 11.2239979 10.4846398 5.7733845 8.5022829 7.9456305 11.0141410 4.8146068 9.7356516 NA 10.8733990 0.2498700 3.2498245 9.9225776 6.7998502 0.9868114 8.3105183 6.7786015 7.3927802 -0.3351531 14.3031260 1.2498094 10.2740386 NA 8.2629123 4.6421412 8.1942905 9.5762517 12.998511 4.249825 8.972060 13.440624 10.329751 10.701033 13.278074 12.380822 9.097402 10.020211 12.742260 10.625586 7.804411 9.066806 NA 7.733638 10.897580 10.518169 7.103652 9.034457 9.053953 7.340817 10.369148 6.583724 7.799286 10.887956 7.128384 1.472228 6.804411 5.192648 9.339935 10.220408 8.142618 9.310518 9.079545 4.392778 10.023511 10.784449 11.061732 8.779903 10.138058 7.361827 NA 9.329982 6.940472 3.522847 10.410954 1.472228 11.109616 10.026804 6.809519 14.432797 10.696906 11.101832 11.633167 10.555884 8.844769 0.249870 TCGA-GM-A5PX 65 0 NA 551 breast stage iib t2 n1mi m0 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 1 white not hispanic or latino 296.27.0 NA NA 2 2 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5.006051e-07 2.224912e-07 10.4270087 7.8684213 7.3413872 10.9848264 1.2294033 9.8623776 NA 8.9629628 10.5452866 10.6444198 9.1777497 7.4614033 7.8465435 8.4126041 7.5270625 8.9708493 9.8780396 9.5331631 7.9573029 0.9663566 11.2049915 10.9399018 8.1201534 11.6507459 9.4573993 9.7986051 4.5986153 10.2896279 NA 1.4517518 8.0622723 10.8961981 12.5598324 7.7292285 13.1607355 12.4852961 10.0297430 7.8068112 4.1362734 7.6997022 8.0852892 10.2577489 8.2646396 12.8492202 0.9663566 11.2183037 13.9292440 6.5270625 10.2349320 9.8434786 9.2683013 5.8342435 NA 13.9820013 9.5942466 1.6444101 8.2256205 NA 3.3993078 9.4159093 9.7051159 10.1277318 11.3810332 9.5986163 9.6826530 3.5513068 9.9758967 9.6640106 7.6359415 7.4485508 4.8538709 10.2851167 13.8692506 5.6323089 10.4777053 10.0633266 8.4109486 2.5513191 4.7737010 8.0431635 7.7659530 10.1635646 NA 5.3993078 6.3586653 9.5758960 10.9714111 9.1611049 5.1201528 4.3723392 9.1835786 11.7345323 1.9663566 13.6698622 6.5632832 7.0997476 11.4765187 13.5582442 12.3368174 9.1728740 10.3177289 10.8672148 10.6152448 9.5905951 0.9663566 9.1951667 11.6165022 10.2289127 NA 10.0722564 8.7051157 -0.3554976 2.8931098 8.6359415 10.0161965 9.6044218 8.6073159 14.7447742 9.9234501 8.6983456 8.6737069 3.8538759 15.5425961 9.8237070 12.7192303 13.9267482 9.4914771 9.7941669 7.0580480 10.2458053 -0.00193990 1.03400000 1.03940000 0.00402430 0.00402430 0.00430210 0.00777830 -0.00352180 -0.00352180 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 0.00235810 0.00235810 0.00235810 -0.00429290 -0.00429290 0.00416320 0.00666530 -0.00415460 -0.02000100 -0.02000100 -0.02000100 -0.03817900 -0.00774820 -0.00774820 -0.00083160 -0.01257600 -0.00193990 0.00000000 0.00402430 0.00430210 0.00829610 0.00777830 -0.00207840 0.00555290 -0.00352180 -0.00352180 -0.00556820 0.00346870 0.00000000 -0.00221680 -0.00221680 -0.00221680 -0.00221680 0.00041593 0.00041593 0.00235810 0.00235810 -0.00429290 -0.00429290 -0.00429290 -0.51199000 -0.53581000 -0.00415460 -0.53042000 -0.02000100 -0.02000100 0.00555290 -0.03817900 -0.00774820 -0.00083160 -0.00027724 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8118380 13.1778104 7.3238996 9.8550912 0.9663566 10.6980064 0.2293418 0.2293418 8.9100349 9.5422654 0.9663566 7.7941669 4.8732374 10.2293823 9.7332081 1.2294033 8.2498994 9.0956309 10.6521480 10.5159401 9.3393087 6.1601195 11.9442003 2.3448569 8.7265690 9.6826530 4.3448569 NA 10.3159609 3.3993078 13.3692534 12.0012844 9.2683013 10.6249165 9.0706845 9.7979719 2.6444101 0.6444101 NA 4.0706813 9.5354441 10.7695104 10.5982525 6.6102040 7.5595522 7.3892536 10.7691874 5.6556466 9.7003801 NA 10.4863772 2.2293726 5.3168445 9.8147268 6.4811649 3.8143453 9.4315062 7.9088627 6.2368772 -1.3554976 14.1997579 -1.3554976 10.4753312 NA 8.9263500 5.7105089 8.1140619 9.4175591 11.507845 4.527064 8.759463 13.160735 10.203797 11.259360 12.849220 10.927219 8.875641 9.804922 13.286641 9.974216 7.765953 9.610204 NA 8.183579 10.738168 10.462203 6.199009 8.872036 8.645828 6.863588 9.376621 6.458202 7.032437 11.650746 8.738498 4.688813 6.844092 5.067325 9.938466 10.202362 7.621700 9.114062 7.041025 4.892347 10.127732 10.092020 10.614166 9.259130 9.656346 7.023799 NA 9.275142 7.437308 4.399308 10.971411 6.715882 10.607316 9.183579 6.993148 14.610317 10.637358 11.045299 12.022579 10.854178 9.200926 2.229373 TCGA-JL-A3YW NA 0 NA 360 breast stage iib t2 n1 m0 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 3 asian not hispanic or latino 239.28.0 NA NA 2 1 NA NA 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1.585249e-06 4.171709e-07 11.7646506 5.0027250 7.4428722 11.3965863 0.5269702 9.7606122 -0.4729297 8.6893837 10.7367504 9.9448450 9.5431043 6.7019177 8.2566130 11.0290783 5.1708504 9.4985359 9.2968302 10.2532106 8.8489205 6.5930818 11.6166084 11.6843394 12.7720251 10.3950433 9.6646240 10.0113118 7.1994181 9.4081064 1.5269702 0.1119661 9.1699465 10.7630067 12.2216768 8.6830757 12.8600779 11.3173409 11.9004014 3.8845491 1.1119661 7.5984545 8.6131286 6.8933149 8.1994176 10.5396169 NA 12.6100562 9.7896746 7.3724829 9.5582939 10.2287321 8.1508739 5.0968480 2.3343394 15.1299641 12.7803103 2.5269952 9.1798375 1.3343394 5.7364452 9.9353221 9.9198464 9.0337957 9.6805445 9.4978173 10.4931373 2.5269952 10.1540702 10.4183965 6.6716500 7.7701663 3.1708544 8.4518050 15.4278003 7.4129331 9.9600562 9.7677837 8.9257360 3.1708544 4.7168153 8.6394319 7.9469525 10.7100074 -1.4731299 6.7701670 7.9063705 9.2055927 10.4271045 7.9385034 7.2343519 6.5713871 8.8319140 11.2760238 3.1119494 13.8068931 4.5713856 7.0544697 12.2480916 15.2728637 13.3912270 8.7879120 10.4000520 10.1887706 9.6690994 10.6604558 3.5713856 9.6064772 10.5241719 9.7019181 0.1119661 10.9973971 8.9395622 1.9864109 3.1714310 9.0178434 9.6342095 10.0544695 9.6184279 15.6354863 10.2113027 8.8601478 6.2885431 3.2818763 12.4572678 6.8712880 13.5393114 12.9514868 9.9458991 9.6799111 7.4695067 9.5323152 0.1204500 0.1204500 0.3403600 0.0356650 -0.1896100 -0.0788100 -0.1119500 -0.0515860 -0.0515860 -0.4887900 -0.4887900 0.2276200 0.3369100 -0.2173800 -0.0194520 -0.0194520 -0.0194520 0.0000000 0.0000000 0.3225300 -0.0866510 0.0139110 -0.1595000 0.5725500 -0.1316000 0.0093098 0.2240700 0.0942010 0.5117600 -0.0437370 0.1204500 -0.0142280 0.0599370 -0.2167600 -0.0788100 -0.1570700 -0.1570700 -0.2358200 -0.0515860 -0.4153100 0.0499660 0.1984700 -0.4887900 -0.0847190 -0.0847190 -0.0847190 0.0061090 0.5142000 -0.2142900 0.0360880 0.2091600 0.0000000 -0.1953700 -0.1953700 0.5341500 -0.0919490 0.0139110 0.0101460 -0.2095800 -0.1316000 -0.3594300 0.0093098 0.1401300 -0.0087146 0.0620560 -0.2000000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 9.1034767 15.4191795 4.6767413 9.9579675 4.0274726 10.7506925 2.2274330 5.7937789 9.8135502 9.3669835 NA 8.7749198 7.3693426 10.5224063 9.8751672 2.9193019 8.1834175 8.5269925 9.0397328 9.7749200 9.0900266 6.9657843 11.5717280 2.6144507 7.8444051 10.4931373 2.5269952 -1.4731299 11.0719569 0.8489584 13.1172871 12.8207514 7.9342599 9.6843394 9.8347624 9.9014886 6.4338825 3.2818763 -1.4731299 5.6459322 8.7400968 10.2269985 8.5521319 4.8123955 10.1364252 8.7180516 9.7624085 5.9106967 9.1843108 NA 10.2326248 5.1994172 3.3849754 9.3368892 6.3893190 6.4035097 10.2570380 9.0258416 7.9945978 10.2756046 13.8616149 1.1119661 11.0911419 0.1119661 9.6355168 5.4927761 8.2480917 8.8296314 11.792934 8.283549 8.286881 12.860078 10.402358 11.191217 10.539617 9.770166 8.356255 10.323438 13.243115 10.999176 7.946952 9.852298 1.111966 8.318155 10.930004 11.159079 4.334347 9.836469 8.106309 8.605437 9.370191 8.104421 7.134323 10.395043 10.181628 -1.473130 7.418776 8.847477 11.292900 10.817011 7.207739 9.981292 8.119450 7.018846 9.033796 10.463998 9.941149 10.646258 10.057399 8.358300 6.170848 10.234925 7.212477 7.518514 10.427105 8.303426 11.056667 8.831914 7.557660 13.685129 10.504988 10.764800 12.663503 11.310605 9.486270 2.227433 TCGA-JL-A3YX NA 0 NA 352 breast stage iia t2 n0 m0 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 0 asian not hispanic or latino 234.26.0 NA NA 5 2 NA NA 1 2 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.396621e-07 1.668684e-07 11.1524411 7.5305000 6.9989108 11.6619215 -0.6910567 10.0675521 NA 8.8919954 11.3691019 12.9836566 9.7033752 7.1884959 8.5721818 9.4624646 8.0368330 8.2292654 10.4462240 9.2292654 7.0368330 3.4788424 11.1443709 10.6308406 12.8718108 11.3150633 9.1298893 10.0270173 3.7351755 9.9277569 NA 3.8324749 6.5568402 10.8673333 12.5781854 7.5592111 12.8700215 12.3649575 9.5615780 6.4937882 3.1668922 6.3089124 8.0704639 8.2558189 7.2188054 12.5916390 7.1098129 9.3229331 14.4143914 4.5568402 10.3480509 11.0894523 5.8167072 3.8938767 1.7683326 13.3684695 9.0646264 2.8324647 8.2732534 -0.1060942 3.6664612 9.2374308 9.7288727 9.8480714 10.9622055 9.4246066 9.5891034 1.3088851 10.5847461 10.6440237 7.7866708 7.8383430 3.1162649 11.5973461 14.4223292 7.8964838 10.6183889 10.0845229 8.2411275 1.1162982 2.8938670 8.5341200 7.7161802 10.1703873 -1.6910567 3.5183715 8.2396501 9.7709035 10.0482712 6.7055177 3.8007653 4.1162649 10.5256584 11.9340506 2.8938670 13.4749972 6.5663007 7.0470050 10.8354118 12.6785099 11.6974681 8.2790185 10.7228049 10.7336037 10.2790724 10.3253727 4.0093561 9.5873620 10.7132558 11.2201173 -0.1060942 10.2790184 9.4535709 -0.1060942 4.7039755 8.6741414 11.8366339 10.3236305 8.2833273 14.5292720 10.5940258 9.3312804 8.6149741 1.8938670 15.4363226 9.5686558 12.7224744 12.6144756 9.8519444 9.0136808 7.4738194 10.8288559 0.6633900 1.0728000 0.3885800 -0.3457700 -0.3586200 -0.3611700 0.0377310 0.0273060 0.0070323 0.7248300 0.7248300 0.7248300 0.0134420 -0.3377200 0.0000000 0.0024467 0.0024467 0.0119070 0.0099683 0.7011300 -0.3454200 0.0353320 0.0322300 0.0322300 0.0322300 -0.0471730 -0.0471730 -0.0471730 -0.3364500 -0.3325300 -0.3510300 -0.7167800 -0.3457700 -0.3611700 -0.3696000 0.0212730 0.0212730 0.0273060 0.0070323 0.0053636 0.0080064 0.0149780 -0.7274100 -0.1239900 -0.1239900 -0.1239900 -0.1239900 -0.3377200 -0.3377200 0.0146980 0.0024467 0.0119070 0.0099683 0.0099683 0.7125800 -0.3454200 -0.3410600 -0.6864600 0.0322300 0.0322300 0.0242170 -0.0471730 -0.0471730 -0.3364500 -0.3414000 -0.7109900 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 -0.333 0.056 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 -0.333 0.056 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 7.8265822 12.6983422 7.3910614 9.6537632 0.4659222 10.7230692 3.0093472 NA 9.3910616 8.7299256 0.3089433 7.1226934 4.7351755 9.9554713 9.8620619 5.3750012 7.3060918 8.5497038 9.3402692 11.7818572 9.4332084 6.4888219 10.7767728 -0.2850731 9.2120413 9.5891034 4.9236246 -1.6910567 10.6229293 2.8324647 13.2362276 12.3534774 7.0902723 9.4968831 6.6263252 9.9032372 5.3312789 1.1162982 -1.6910567 8.3464597 9.8901132 10.2858346 9.4750756 4.3750047 9.2702900 7.9162431 10.9437236 5.1792762 9.4968831 -1.6910567 10.0364076 2.8324647 3.8324749 9.7809078 7.0594851 3.3533092 9.5153164 6.9051017 9.5091982 2.3963787 14.1072072 -1.6910567 10.3120790 0.3089433 8.6420679 4.5568402 7.7662937 9.1410115 13.059658 6.438196 8.361481 12.870021 10.603246 11.327982 12.591639 11.940203 9.644861 10.201835 13.071865 12.374329 7.716180 8.603533 5.154401 7.766294 10.527476 11.3701150 6.3641942 8.9590668 9.6465344 9.0919108 10.4223715 5.5756996 7.1915557 11.3150633 7.0804018 0.6308714 6.0231577 7.1444574 11.2449983 10.1354610 9.1606616 10.1919376 10.0300117 4.0093561 9.8480714 10.4557994 11.3076793 10.5183660 10.6590230 8.2572799 3.3089142 9.9852003 6.8548808 4.4586576 10.0482712 5.9088249 10.9512102 10.5256584 6.9884632 14.0814076 10.4307698 10.4589771 12.7952448 11.3053861 9.5473174 0.3089433 TCGA-LD-A66U 44 0 NA 646 breast stage iib t2 n1mi mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 2 white not hispanic or latino 322.22.0 NA NA 3 2 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1220767 6.8823679 6.1978693 11.5990979 0.1681285 9.0578802 NA 8.4990398 11.0271398 13.3898609 8.7137309 7.1415810 8.5460564 9.5547038 6.7530857 8.7405073 9.6719484 9.2965469 7.0507661 3.1681285 11.5447908 10.5005323 12.1657727 12.0965177 8.6302842 9.9690227 7.9207822 9.4207883 0.5831339 2.1681285 7.4960492 11.1671832 12.2743193 6.9363070 13.2692777 13.6971465 10.3233626 7.3645199 3.0425918 7.8892222 7.9690227 8.9581998 6.9883018 12.4871362 4.8499492 11.3365859 13.7761850 7.0710000 10.5602076 10.0563586 7.2731578 8.7852841 NA 14.8668012 12.5613577 1.7530910 8.7163026 NA 3.8310868 8.9028324 9.2431561 9.8328663 9.9920208 8.5373566 10.0441280 2.8310868 9.6350489 10.2184250 8.5050013 7.9407124 10.0684865 11.2935363 14.0262657 6.7497246 9.9385113 9.5242079 7.9516665 3.3380535 4.0094278 9.1643609 7.5718452 10.5985753 NA 4.3380464 7.0548355 9.6975534 10.6673042 8.9385113 5.6599759 4.3905164 8.5675785 11.9941415 4.9925509 13.3374215 7.6942959 6.9582000 12.1543204 12.1647139 12.0811368 9.4286504 10.7521457 10.3081004 10.2120614 9.7169446 2.1681285 10.4915529 11.0346290 11.1990197 -1.4169624 10.2270165 8.2070417 1.5831821 3.9104928 8.0830059 10.7901746 9.0899636 8.8310877 15.1151965 9.9467475 8.2626403 8.1793498 3.4900566 15.7692358 9.3313532 13.3763571 12.6177873 9.6227648 10.1937237 6.7227119 10.5612629 -0.00774820 0.93650000 0.93650000 -0.00899060 -0.00899060 0.00124810 0.37168000 -0.00788630 -0.31587000 0.00750000 0.00750000 0.00124810 -0.00083160 -0.00083160 0.00597000 0.00597000 0.00597000 0.55726000 0.54971000 -0.31677000 -0.00470790 -0.01050800 -0.00968060 -0.00968060 -0.00968060 0.00097064 0.00097064 0.00097064 0.31097000 -0.00774820 -0.00774820 0.00666530 -0.00899060 0.00124810 0.00000000 0.32807000 0.32807000 -0.00788630 -0.31587000 -0.31587000 0.00569190 0.00736090 0.00750000 -0.00747200 -0.00747200 -0.00512270 -0.00512270 -0.00083160 -0.00083160 0.00597000 -0.30240000 0.55726000 0.54971000 -0.18961000 -0.30942000 -0.00470790 -0.01050800 -0.49099000 -0.00968060 -0.00968060 -0.00166290 0.00097064 0.00097064 0.31097000 -0.01675200 -0.49078000 0.000 0.000 0.000 0.000 0.360 0.360 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.360 0.360 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7430315 13.6195485 9.4542954 10.5260412 4.5373582 10.8086690 4.7729836 0.5831339 9.5718450 8.0849975 0.1681285 7.3313532 4.4658047 9.9819040 9.7723670 4.1067252 8.2306185 8.6397980 9.9786944 11.9914900 9.4674910 6.3775767 9.7618251 1.7530910 8.7754529 10.0441280 5.8215648 NA 10.8343468 2.9754835 13.2478853 11.9982418 7.2870641 9.3347044 8.7717493 10.0770157 3.2835959 2.5831580 0.1681285 8.1145419 10.2467184 11.1648316 9.4953010 4.5604398 7.7813354 8.6825080 10.2870638 5.4033393 9.7386110 -0.4167698 10.8514098 1.7530910 4.4900502 9.4866882 7.1072704 5.4779784 10.0674797 7.9925509 9.3791999 NA 14.9226450 0.9051198 10.7319546 NA 7.7779174 6.3246270 7.3775758 9.3546496 12.927532 4.811980 8.214337 13.269278 9.982438 10.951121 12.487136 11.363700 9.206475 10.176551 13.707322 11.544791 7.571845 9.604834 3.042592 7.507973 9.745552 10.565797 6.670624 8.999958 8.473424 7.205212 9.864406 8.192339 8.797479 12.096518 7.425510 1.168129 8.357947 6.930206 9.438029 10.035401 7.931889 10.111126 6.949482 6.422364 9.832866 10.794744 9.877207 9.468094 10.047706 6.560440 NA 9.506963 7.701115 7.223405 10.667304 5.525674 10.646218 8.567579 7.133907 14.696210 10.531892 9.576806 12.287280 11.263300 9.050766 1.905081 TCGA-LD-A74U 79 0 NA 203 breast stage iiic t3 n3a m0 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 11 white not hispanic or latino 338.18.0 NA NA 2 4 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1333824 8.6245707 7.4635783 11.5401963 4.1349520 9.6238235 1.2936648 9.5063526 11.7500080 9.6208320 9.4685792 7.9278597 8.4246530 9.8565320 6.9894615 9.2861199 11.3364530 9.7065763 8.1412330 3.8379735 12.0422658 10.5635595 11.3980340 10.7676975 9.6110663 10.3247805 5.9660797 9.8773507 0.7086728 2.6155811 8.6672439 12.4309650 12.8751681 7.8861105 12.3771330 12.7972310 10.8070523 7.0351202 4.8786175 7.5415814 8.8119789 9.3722493 8.3579474 12.5166497 0.7086728 10.6282993 13.2087238 6.4021781 9.6937432 10.5775137 7.5759695 4.8379735 -0.2912389 13.9643571 11.9416441 2.5160404 8.0033121 -1.2912389 4.8379735 10.1788416 9.8211306 9.0272340 11.9583972 10.0678916 10.4568840 3.6628891 11.3414592 10.8221078 8.2381219 7.8985155 6.1349561 11.1947719 15.1733167 9.3375376 10.6563281 10.3086040 8.1965313 1.8786076 3.1681285 7.9684347 8.6379496 12.1604174 NA 3.9940909 7.3986890 9.4169128 11.0983225 6.8328128 6.7199186 6.3525467 9.8507982 11.8286049 2.9566143 13.5975295 5.7199172 7.6831055 12.4946544 12.0495149 12.8765797 7.8172158 10.4246531 10.2861199 10.2950619 11.3011482 4.9375092 8.7774694 11.7963197 10.6820297 0.2936059 10.5204672 8.7921705 2.0306186 4.4393306 9.8495210 10.4043545 9.6636145 8.8366854 14.7527678 9.9830693 9.2164857 9.3978156 4.0306186 15.1680267 9.8418334 13.6615689 12.4528943 10.0739200 9.7680356 7.9754777 10.5663962 0.12384000 0.12384000 0.12384000 0.00038006 0.00038006 -0.00695520 0.05220400 -0.00584970 -0.00584970 -0.00225270 -0.00225270 -0.00225270 -0.00211420 -0.00211420 -0.00072888 -0.00072888 -0.00072888 0.02381000 0.02381000 -0.27419000 0.00246100 -0.08708300 -0.27503000 -0.28064000 -0.28064000 0.02928900 0.02928900 0.02928900 0.01652900 0.12384000 0.12384000 0.00232220 0.00038006 -0.00695520 -0.00695520 0.05220400 0.05220400 -0.00584970 -0.00584970 -0.00584970 0.05206200 0.04796000 -0.00225270 0.00232220 0.00232220 0.00232220 0.00232220 -0.00211420 -0.00211420 -0.00072888 -0.00072888 0.02381000 -0.27395000 -0.27395000 -0.27419000 0.00440510 -0.08708300 -0.28516000 -0.27503000 -0.28064000 -0.29145000 0.02928900 0.02928900 0.01652900 0.05149300 0.01443300 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1254886 13.6817606 5.7530857 10.5852081 4.1010113 11.2157425 2.7961616 -0.2912389 9.0215741 8.8185218 -1.2912389 7.8741760 4.4635767 9.3695784 10.0266689 4.2936500 10.3334866 9.6497387 11.1451425 9.8060649 9.7046986 8.1454028 11.0493758 2.7059779 9.1722155 10.4568840 4.4091329 -0.2912389 10.8600249 4.7086894 13.1160917 12.2771223 8.5541813 9.9801541 9.5304651 9.3704692 5.6973763 1.7086728 -0.2912389 5.8276311 8.4900510 9.8514364 10.2637596 7.0706351 9.1160970 7.7282818 9.8904646 4.8379735 9.1127681 0.2936059 12.1627333 3.7961513 5.2322540 9.4719865 5.6659100 4.1010113 9.9713733 9.8379741 6.9375104 2.4091193 13.9002131 2.0306186 10.6050236 NA 7.0750138 6.1265434 7.7310590 8.6902585 12.336098 5.697376 8.261360 12.377133 10.101009 10.557705 12.516650 12.097247 9.176011 10.346674 12.983652 10.126016 8.637950 8.785507 1.030619 7.026104 10.661432 11.3637746 5.9566189 8.5898051 8.4998539 7.5224725 10.6660617 7.1433189 8.6275543 10.7676975 7.1052957 -1.2912389 7.0261040 7.7326118 11.1632475 10.6831058 7.9302784 9.3934398 10.6827472 5.1516356 9.0272340 10.4781158 10.8057357 10.7865082 10.6035089 8.8520744 8.5272733 9.9536674 8.3383576 5.7086921 11.0983225 6.8985155 11.2288727 9.8507982 7.4770078 14.3607238 10.2680682 10.6679687 12.4981229 10.7615988 10.0557588 -0.2912389 TCGA-LD-A7W5 52 0 NA 124 breast stage iiic t2 n3a m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 23 black or african american not hispanic or latino 360.15.0 NA NA 4 5 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.17490007 8.46089202 8.25373405 12.17079283 0.68086442 9.15900748 -0.05619117 8.80393122 11.91278569 10.38889383 9.30509159 7.87855247 9.04804078 10.80599967 5.10038481 8.90677487 11.23562523 10.41792286 7.44106511 4.97362505 12.84688205 10.58140953 13.90089027 10.65669255 9.34902043 10.59821659 8.74045944 9.30509159 0.35895883 1.94388383 8.56836963 11.17809762 12.24566090 7.11713917 12.28678697 13.64186006 9.37572477 6.46220450 4.00277452 6.98096782 8.74477868 11.20283752 7.22619541 12.65984094 -1.64115367 10.73477041 13.31333998 3.91350220 10.13076900 10.04716673 7.77676924 5.16626955 -0.64115367 14.77146446 10.36489182 3.44637535 9.40467602 1.52882133 5.05935528 9.61512511 9.66839272 7.68309708 10.23696742 10.06282005 10.34297879 3.68084192 10.61305928 11.13760963 7.06627544 7.37293730 10.80961220 12.22889578 14.67319892 9.91398007 10.21728610 10.29776093 8.50102347 1.94388383 5.43573193 7.95324079 8.31456648 10.51689489 -1.64115367 3.94387445 7.24155993 10.08853717 10.06541250 9.46089202 7.19180641 4.31311522 9.29702584 12.08428269 5.63504041 12.99876586 5.80185965 7.25676160 12.00873397 11.06584410 12.80309016 8.24918078 11.02158480 10.95720160 10.64069874 11.19516412 4.83465055 9.62687349 12.11077430 12.03861646 0.35895883 10.41589279 9.54068989 2.35890258 4.59846645 9.48303780 11.01467079 10.46318757 8.76830741 14.90176695 9.84474577 9.45233392 8.92306596 2.81833931 13.89352330 6.11380466 12.66198367 13.04601870 10.43506399 10.52288053 7.10375045 10.78122044 0.139840 0.139840 0.139840 -0.163570 -0.286910 -0.070804 -0.051721 0.144100 0.139070 -0.267330 0.229310 0.651030 0.287390 3.656900 -0.123940 -0.123940 -0.123940 0.136720 0.395900 0.179660 -0.203860 -0.022332 -0.277860 -0.262400 3.650600 0.000000 0.000000 0.000000 0.137170 0.139840 0.139840 0.090575 -0.175650 -0.070804 -0.070804 -0.067592 -0.077433 0.148310 0.145780 0.139070 0.117270 -0.026541 -0.283110 -0.299220 -0.209080 -0.020412 -0.020412 -0.282990 -0.062495 -0.287030 -0.071739 0.136720 -0.292720 -0.292720 -0.286910 -0.279060 -0.022332 0.146780 -0.729410 -0.262400 0.218520 0.000000 0.000000 0.137170 -0.294730 0.108180 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.273 -0.273 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 -0.113 -0.113 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.273 -0.273 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 -0.113 -0.113 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 10.4830378 13.4008750 5.3812834 10.6864691 7.5561328 12.3130219 7.5187877 0.6808644 9.0454170 7.5462686 -1.6411537 9.4483670 4.3812834 10.2071482 9.9690185 1.9438838 9.7788766 9.9782194 9.4785061 9.7799293 9.6243616 7.2537340 11.2975771 2.9438838 8.4648251 10.3429788 6.6718000 NA 11.2578956 4.1402797 13.0910839 12.1552603 8.1304058 10.1814872 10.1674785 9.6327121 7.2537340 3.1662655 -1.6411537 5.6068449 10.1742998 10.0335501 9.0731620 5.2168972 10.4304526 10.0211398 10.5853287 5.3923380 9.3560958 -0.6411537 12.0580551 4.9882711 5.1402756 9.6557810 7.0925415 7.9096633 10.1254454 8.4843299 9.4121635 -0.6411537 13.8616550 2.5288463 11.3083785 NA 8.5475054 5.8346505 7.9325638 8.2137847 12.152758 5.635040 8.393715 12.286787 11.010865 9.891272 12.659841 12.119325 9.127101 10.663553 12.893219 10.992139 8.314566 8.803931 3.446375 9.670097 10.834903 11.63271204 6.62101153 8.92782269 9.08598598 7.30143126 11.12528179 9.15576719 10.14967219 10.65669255 8.30289614 4.40330863 8.28224379 8.31418850 9.93114289 11.56532037 7.55120914 9.64547417 8.84474562 8.34333498 7.68309708 10.44173079 10.40672203 10.06929240 10.78518123 8.35750670 -0.05619117 10.39809936 8.68329959 8.85776551 10.06541250 5.66269828 12.23170867 9.29702584 7.67653259 14.17129433 10.28372897 10.20753943 12.28641666 11.68492452 10.13822546 3.26581192 TCGA-LD-A7W6 54 0 NA 140 breast stage iib t2 n1a m0 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 2 white not hispanic or latino 360.15.0 NA NA 2 2 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.7533045 7.3404759 6.3167413 11.8361350 0.9175463 10.2746820 1.5956469 9.4644643 11.9065386 10.9416014 10.1348007 8.2502780 9.6956469 8.7755510 8.2803903 9.3158861 10.9742076 9.4949987 7.3098874 2.5956469 12.1955546 9.9657843 11.6903793 12.5050662 9.2376935 10.4383850 6.2609779 10.3064483 0.1806571 3.4029950 7.7171753 12.4485614 12.9566260 7.5843267 13.1316461 13.0633747 9.5491108 7.0509685 4.7249231 7.7705674 8.3802766 10.1507102 7.9377163 13.0613357 2.4029950 10.7491938 14.2794863 7.5556436 9.9339157 10.5671854 7.9793463 8.1673946 0.5955991 14.2525174 9.5878720 0.9175463 8.1073944 2.0550568 5.2249972 10.0023783 9.8589110 10.9515434 11.3519896 9.4473907 9.7300681 2.4029950 10.9217904 10.9229137 8.3371090 8.2574199 10.8647685 11.9275384 14.2381730 8.6261022 11.4397591 10.8778615 7.6857545 3.2395050 2.2960756 9.0944910 8.7542515 11.4658139 -0.4043054 4.4285310 7.6068693 10.4575041 10.5156224 6.7093844 6.0468533 4.5025343 10.4571164 12.1748399 3.1192068 13.3082763 6.3098874 8.0612081 12.3490675 11.6842645 12.8698743 8.2556376 10.4233814 10.7152315 10.9840062 11.4845753 5.0713765 9.1357698 11.5788135 11.7668186 0.1806571 10.1511896 9.0663007 1.5956469 4.8271534 9.2240873 10.7165276 10.3090284 9.0292273 14.5674997 10.4426992 9.4094230 9.5700564 3.1806094 15.7757744 8.8624285 13.6049456 12.4993354 10.1650228 9.9933164 8.2926092 10.8699821 -0.00498440 0.51839000 0.51839000 0.00374650 0.00374650 0.00624810 0.01223700 -0.00152430 -0.52512000 1.31800000 1.07930000 0.00597000 0.00013863 0.00013863 0.01419000 1.45700000 0.00944910 -0.00643440 -0.00643440 0.01084200 0.00000000 -0.00456950 -0.01986300 -0.01986300 -0.01986300 2.07270000 -0.03435900 -0.03435900 -0.00678130 -0.00498440 -0.00498440 -0.00138580 0.00374650 0.00624810 0.00624810 0.01223700 0.01223700 -0.00152430 -0.52512000 -0.52512000 0.00541390 0.00124810 -0.52174000 -0.00235530 -0.00235530 -0.00235530 -0.02832600 0.00013863 0.00013863 0.01419000 -0.50256000 -0.00643440 -0.00643440 -0.00643440 0.01084200 0.00000000 -0.00456950 -0.58892000 -0.01986300 -0.01986300 0.01181800 -0.06262900 -0.03435900 -0.00678130 -0.00193990 -0.50588000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 8.9276784 12.5605241 6.5498386 10.4190091 4.0292673 11.0367704 2.9175654 -0.4043054 8.8647684 9.0385854 0.1806571 8.6767124 5.2538532 9.7358325 11.2713783 4.8624266 9.1511896 9.4667770 10.3320437 10.1612200 9.8866398 7.9685067 10.7771047 2.0550568 9.9531938 9.7300681 4.1806014 NA 10.7067774 4.1806014 12.4488539 11.8694374 7.7223465 10.0698548 10.7220237 9.2448980 4.8810430 0.5955991 -0.4043054 2.8435618 11.0809680 9.8358369 10.3839523 6.4536229 8.1781036 7.1918311 10.3908698 6.1880982 9.8647685 -0.4043054 13.4407888 3.4029950 5.3235610 9.3344771 6.5115803 6.0050316 10.1654975 8.2698341 8.0550736 NA 13.6229863 0.5955991 10.2117311 -1.4043054 8.1635979 6.0468533 7.5814838 9.0029095 14.755708 3.843572 8.419009 13.131646 10.533751 10.419805 13.061336 12.582373 9.378935 10.633144 12.989032 11.919822 8.754252 8.976103 2.595647 7.648210 10.907958 11.0087408 6.8050951 8.5942324 9.2707167 8.5352209 10.6705626 7.2645270 8.3047255 12.5050662 6.1578845 0.5955991 10.1396402 7.5947680 9.8494892 10.0134944 8.7171753 9.0509691 11.8169268 6.7093844 10.9515434 10.7434827 10.8035713 10.2277282 10.8758326 8.2431002 1.1805935 9.1290787 6.7599960 7.0134946 10.5156224 6.4094232 11.1091720 10.4571164 7.1730705 13.9040157 10.1876316 9.8268630 12.4355345 10.7621187 10.3175954 2.5956469 TCGA-LD-A9QF 73 0 NA 266 breast stage ia t1c n0 m0 2-10-2014 female 2013 NA NA infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 2 6 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1272892 5.5986659 5.3091616 11.1830226 1.2912499 9.5812576 NA 9.1417383 11.0882519 10.4002860 9.2547131 7.3399978 8.6059354 10.1498416 5.0778369 9.7685924 9.1945183 9.8465949 8.4409858 4.6131662 11.2474698 11.4649160 12.2606254 10.7111991 9.4987413 10.0791414 8.5523936 10.3290439 0.9693071 3.6697525 9.4859957 11.2915206 12.4364170 8.2266988 17.5093064 11.8801409 11.4407320 6.5913623 3.4287454 7.1640672 8.6680156 8.6904101 7.7669721 11.6072941 1.2912499 11.8091051 11.0950471 5.5391650 9.8000716 9.6185670 7.9664905 6.8334973 -1.0306192 15.5142454 9.7894898 3.0567743 8.8792040 NA 5.2547112 9.3080473 9.7107779 9.0804463 9.6176684 9.2124847 10.3765785 2.5542696 10.8303977 10.4002860 6.3530145 7.7958591 11.6138431 8.3594799 14.9985980 7.7169669 10.2249296 9.7090914 9.4997172 1.5542941 1.2912499 8.1417383 8.3573281 10.7790789 0.5542450 5.5986659 7.5876965 9.6844148 11.0003227 6.1787644 8.0218789 6.9749354 10.0394318 11.4140669 0.5542450 13.7615927 4.9000505 6.9749354 11.5582596 14.3360087 12.6254004 7.9264128 11.1241289 10.4967878 9.8761112 10.6412940 3.8675209 9.0804463 11.2101021 8.8807027 0.9693071 10.6775326 8.7175037 2.1392403 3.1255519 9.1921056 10.4845178 9.6086514 8.6575611 15.3125659 10.0882519 9.2266985 7.3399978 3.5542696 13.9521707 9.2523991 13.3523400 12.1059816 9.8014096 9.3976710 7.8762014 9.6379920 0.00444110 0.00444110 0.00444110 -0.00041585 -0.06646200 0.00000000 0.00226600 0.01544700 -0.16421000 -0.00415460 -0.00415460 -0.00415460 0.10307000 0.10307000 0.01101800 0.01101800 0.01101800 -0.07765800 -0.05725000 0.00013863 -0.06195800 0.00208050 -0.16891000 3.65690000 -0.00387790 -0.01326400 -0.01326400 -0.01326400 -0.04604100 0.00444110 0.00444110 0.00110930 -0.00041585 0.00000000 0.00000000 0.00226600 0.00226600 0.01544700 -0.16421000 -0.16421000 0.14846000 0.14678000 -0.00415460 -0.05212600 -0.10129000 0.00208050 -0.02027600 0.10307000 0.10307000 0.00161730 -0.00465920 -0.05725000 -0.05725000 -0.05725000 0.00013863 -0.06195800 0.00208050 -0.17983000 -0.16891000 0.40294000 -0.12875000 -0.03092400 -0.01326400 -0.05950000 0.03439500 -0.02185600 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 10.42052188 13.73485590 7.11396923 10.01507044 5.61316622 10.73086205 5.92350815 3.05677426 9.38188055 9.52964372 NA 7.77021062 4.94659051 10.10950147 9.51716938 1.55429414 10.35031292 9.07783528 11.04077314 9.98611907 9.60305082 6.85195388 11.36778728 4.49287224 7.34435006 10.37657853 3.49287865 -1.03061924 12.57825861 3.29123518 13.68000962 12.07472829 9.43895254 9.81793370 10.69935634 9.58310026 5.29123886 2.42873200 0.55424502 7.40393914 8.51813263 10.04545826 9.21248471 4.17876244 8.85586079 9.58861383 9.89338102 5.80220097 9.43487713 -0.03061924 10.57293712 4.69722893 4.39557698 9.61211157 7.59143558 7.42463829 10.56689781 9.11141792 9.39242669 4.39557698 14.05303941 1.77665148 10.44706907 -1.03061924 10.04077314 6.75067081 7.90300150 9.05677371 12.16157433 6.66279795 8.81166112 17.50930636 10.16959635 10.26105709 11.60729411 9.74985049 8.99859805 10.05544703 13.43181307 10.71119908 8.35732811 8.12665750 -0.03061924 7.26851861 10.50992322 11.335633 4.013703 9.076528 8.443016 9.017798 10.024085 8.935095 8.293491 10.711199 7.652305 2.876193 8.993065 7.461965 12.209655 11.012680 8.005484 9.478096 9.195723 8.426692 9.080446 10.527253 9.864886 11.500692 10.258753 8.502640 2.428732 10.194922 7.952789 9.047462 11.000323 7.830398 11.345165 10.039432 7.134469 14.576728 10.117787 10.325212 12.292647 11.305817 9.157900 3.428745 TCGA-LL-A440 61 0 NA 290 breast stage ia t1c n0 (i-) mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 255.29.0 NA NA 2 5 NA NA 3 3 2 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.112456e-07 8.343418e-08 1.124646e+01 9.598173e+00 6.648777e+00 1.136917e+01 3.115599e+00 1.014180e+01 2.322044e+00 9.421484e+00 1.148963e+01 1.056077e+01 9.857064e+00 8.042691e+00 9.380221e+00 9.789110e+00 6.475853e+00 9.084929e+00 1.025869e+01 9.818170e+00 8.870485e+00 5.663086e+00 1.209727e+01 1.105879e+01 1.164277e+01 1.058821e+01 9.162512e+00 1.017505e+01 5.746074e+00 1.011516e+01 1.442623e-04 5.000122e+00 9.604365e+00 1.342992e+01 1.271930e+01 8.640365e+00 1.262126e+01 1.149997e+01 1.137715e+01 6.022488e+00 2.737081e+00 8.391006e+00 8.822426e+00 9.821363e+00 8.673724e+00 1.099424e+01 4.248049e+00 1.117609e+01 1.218644e+01 7.238525e+00 9.934794e+00 9.992587e+00 8.859137e+00 4.700562e+00 1.442623e-04 1.396240e+01 1.258605e+01 4.874590e+00 8.430573e+00 1.415164e+00 4.369355e+00 9.756677e+00 1.028937e+01 9.491973e+00 1.066486e+01 9.739338e+00 1.071723e+01 2.938719e+00 1.140278e+01 1.072065e+01 7.360601e+00 7.766097e+00 9.743833e+00 1.031565e+01 1.510660e+01 8.957474e+00 1.126769e+01 1.083564e+01 8.395297e+00 2.502611e+00 4.772709e+00 8.619729e+00 8.952376e+00 1.160081e+01 NA 2.000108e+00 7.629477e+00 1.010078e+01 1.073652e+01 9.774907e+00 7.173381e+00 7.357673e+00 9.925922e+00 1.165580e+01 3.115599e+00 1.331253e+01 5.357672e+00 8.163351e+00 1.242569e+01 1.089570e+01 1.280962e+01 8.458185e+00 1.034108e+01 1.056332e+01 1.073599e+01 1.122754e+01 5.115599e+00 8.633115e+00 1.120265e+01 1.116858e+01 1.000144e+00 1.079427e+01 8.779292e+00 2.502611e+00 4.429516e+00 9.828786e+00 1.041481e+01 9.987858e+00 8.997300e+00 1.421838e+01 1.065027e+01 9.166702e+00 9.062616e+00 5.143079e+00 1.475018e+01 8.309976e+00 1.365461e+01 1.294946e+01 1.009376e+01 9.919977e+00 8.066209e+00 9.948736e+00 0.05751100 0.05751100 0.05751100 0.00000000 0.00000000 0.03622900 0.06451100 -0.06236100 -0.06236100 0.41212000 0.01572700 0.01572700 -0.06172700 -0.05846200 0.09669100 0.60214000 -0.06128600 0.12833000 0.31306000 -0.06370300 -0.05738500 -0.00086871 0.03129500 0.03129500 0.03129500 0.57987000 -0.00443120 -0.00443120 0.04968200 0.05751100 0.05751100 0.00777830 0.00000000 0.03622900 0.05154100 0.00527490 0.00527490 -0.06517900 -0.06236100 -0.06236100 0.11301000 0.10891000 -0.11508000 -0.00456950 -0.00456950 -0.00456950 -0.00456950 -0.05846200 -0.05846200 0.09669100 -0.06128600 0.12833000 -0.06061400 -0.06061400 -0.06370300 -0.05738500 0.02132300 -0.07715300 0.03129500 0.03129500 -0.00470790 -0.00968060 -0.00443120 0.04968200 -0.00221680 -0.03354100 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 9.5598160466 14.2727986095 6.8745892009 11.3611501280 4.8489533768 10.7109266820 3.9697491283 2.4151637296 8.9298717566 10.3179096700 -0.5848903678 8.6540760253 4.8745904304 9.3845441802 10.2184816244 5.0150693217 11.6664921860 9.5819484800 9.7655445256 9.4690835552 9.7844388744 7.8888637728 11.8117624911 4.5850827203 9.7831184012 10.7172253819 6.2793431412 NA 11.2535738078 4.0001172142 12.5900054106 12.0393820311 8.8192348374 9.8939273215 8.1948769919 9.1997925644 5.6439773711 3.7005617872 0.4151096322 5.5649055156 8.9357764812 9.7115004131 8.6000329378 6.9110132119 9.6874841658 6.8663689681 10.2132244190 5.3340211548 9.5483000169 0.0001442623 12.3555631075 4.3924410771 5.8330114992 9.2738226349 6.6041914444 3.7727091371 9.9552857736 9.5540694263 6.3751593613 6.5850827203 13.2843177671 1.7370810052 10.6660482940 -1.5846739906 7.5495836968 6.9189836556 8.1016584795 9.1447785474 13.0992428 5.4485805 8.3635250 12.6212563 10.0472442 9.8466553 10.9942379 11.8634031 8.9445882 10.9577060 13.9510406 12.1281145 8.9523761 7.5925774 -0.5848904 7.4866203 10.9707055 11.936022 6.149867 9.017857 8.401000 8.241706 10.266540 7.631904 7.670186 10.588210 6.575029 3.322044 7.282436 7.246085 11.899855 10.790197 8.058437 9.213629 11.581792 7.098152 9.491973 10.508245 11.096835 10.896705 10.623697 8.300854 4.807473 9.806654 8.261902 5.575028 10.736522 8.847700 11.504774 9.925922 7.510661 13.820000 9.674901 10.194877 12.841422 10.786390 10.253968 3.502623 TCGA-LL-A441 62 0 NA 348 breast stage ia t1c n0 mx 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 255.29.0 NA NA 4 5 NA NA 2 5 2 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.168079e-06 4.727937e-07 12.11518424 8.02813095 6.29868764 12.00610128 1.50283976 10.07394820 NA 8.83075445 11.37267851 10.50439227 10.18230781 8.96680593 9.10025943 9.55630104 7.52025487 9.49529403 9.54600697 10.63067876 9.72682934 3.79233481 11.58556810 10.53073366 13.17279534 11.17328718 9.82224896 10.67108191 8.49024961 10.63239692 0.33285112 2.42037460 9.52210951 12.72098722 13.05159606 6.91033092 11.77208421 13.37302110 9.50407948 6.55207115 3.54235712 9.24429461 9.21630959 11.54128943 7.70794230 8.96680593 0.65480213 11.00753633 10.11056892 7.98574746 9.73174244 9.83672845 7.62061500 7.26659354 2.42037460 15.25889975 10.24600529 2.65482503 9.06337270 -0.08207184 4.69045621 9.63497037 9.55630104 9.20403774 10.67414344 9.88701174 10.44403837 7.75706926 11.72843679 11.38036744 5.84069737 7.54235634 5.77584596 8.66940915 14.66668695 8.81335954 10.86914986 10.96112031 9.98709116 2.72521763 1.65484794 8.89800484 8.98485134 11.00023597 NA 2.50283976 8.12406546 10.29326667 10.23716095 4.82475767 8.15626969 5.16579137 10.11097978 12.06050407 1.65484794 13.15328109 5.56172021 7.32442450 10.96794051 12.40277195 13.06496405 8.04370922 11.48534597 10.28746248 10.48695807 11.08381895 5.51281156 9.33782525 11.72280284 8.94577126 5.59968973 10.70168195 9.34622539 2.65482503 6.37773458 9.91080355 11.57384304 9.45831617 9.98350570 15.03038611 11.43422179 9.30659992 8.76021562 3.19088346 12.68432504 6.84069737 13.08303387 12.22430665 10.37729676 9.72038159 8.61946033 10.35705192 0.1110400 0.3261600 0.7492800 0.0079915 0.0079915 -0.1673200 0.3637100 0.2065800 -0.0273250 0.0768830 0.0768830 0.1263100 0.5582400 -0.0566960 -0.0532690 -0.0532690 3.6569000 0.1504700 0.0000000 -0.2843500 -0.2178100 0.1845800 -0.1227400 -0.0270350 -0.0270350 -0.0096072 -0.0096072 -0.0681140 0.2841400 -0.2402700 0.1110400 0.0068784 0.0079915 -0.1673200 -0.2195400 -0.2844000 -0.2844000 0.2065800 -0.0273250 -0.0273250 -0.0579710 0.3960400 -0.2661800 -0.1580300 -0.1580300 -0.1580300 -0.1580300 -0.0566960 -0.0566960 -0.0532690 0.1075300 0.1504700 0.0000000 0.0000000 -0.0872440 -0.2441100 -0.2697800 0.1708400 -0.1227400 -0.0270350 -0.3257700 -0.0096072 -0.0681140 0.1670800 0.2233800 -0.0685920 0.000 0.000 0.108 0.108 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 0.000 0.000 0.108 0.108 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 11.11467220 13.01205283 3.82475767 10.75785625 7.82074252 13.25330203 9.89419054 4.08779377 9.78771601 8.14186701 7.46475974 8.24878196 4.48264825 9.82275054 9.98215879 4.72521763 10.29145541 9.96816738 8.74653044 9.51218974 9.85208672 7.79438207 11.33677187 3.08778529 8.97495428 10.44403837 4.48264825 -0.08207184 10.92138307 4.74229192 12.94640439 12.19204914 8.46861183 10.27724869 10.88677189 9.78462896 4.42036787 1.50283976 -0.08207184 1.79231398 9.14668373 9.88364938 7.38547073 4.58083289 9.63426163 7.26364010 9.74176308 5.77584596 9.93652900 1.33290839 12.62522429 4.99111364 7.62522445 10.62057175 7.02816577 9.85253887 9.82775822 8.80050812 9.33712323 1.50283976 13.67643540 0.65480213 11.46073581 NA 9.39224722 6.59029062 7.82275054 8.22923509 12.674132 6.690455 8.331493 11.772084 10.042417 10.411053 8.966806 10.464438 9.553837 11.153036 13.286963 10.926994 8.984851 8.008860 4.114259 7.634399 11.346749 10.567121 4.887491 8.915985 10.101914 8.281270 9.733382 10.184261 9.115901 11.173287 5.636683 5.925359 10.088208 9.082244 10.844408 11.121417 6.887491 8.702500 9.716607 9.138647 9.204038 10.227720 12.355184 10.731646 10.217073 8.896099 NA 10.227387 7.214843 10.729775 10.237161 5.784114 11.042848 10.110980 7.699225 13.707535 9.548436 10.567720 12.339492 12.098396 9.750755 2.140255 TCGA-LL-A442 56 0 NA 333 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 255.29.0 NA NA 2 2 NA NA 1 4 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.00879240 0.86251090 7.57281086 11.64713131 0.05519565 11.15695311 1.05512623 9.80291503 12.17958600 10.48061977 10.28546221 7.76422538 8.48768330 8.72668274 7.51252241 8.12526261 12.06085380 8.98143742 6.58652307 NA 11.13645852 9.83977634 13.74213443 11.43573791 9.65923136 10.41598867 1.64011187 10.37619584 0.37706821 -0.35993442 8.15185679 11.32616682 13.21548572 2.64011187 13.18402198 13.04382624 10.19213263 7.00933821 5.16366779 5.34976157 7.59235986 6.46453268 3.88803207 13.20738679 4.07750792 8.88565672 14.09009094 7.31017014 9.78938122 10.76444079 6.86249603 6.09406079 0.05519565 13.16133518 11.46625524 2.05512623 7.58847104 NA 5.16366779 10.44450402 9.88605289 10.70507127 10.32192809 10.18571209 10.20869356 1.96203071 11.85765791 10.71268330 7.25971314 7.59235986 1.64011187 10.44745894 14.76456198 8.57377517 12.62831535 11.04595462 5.95600785 -0.94480435 9.02308815 9.50995488 8.97549434 10.13729064 -1.94508208 2.91312877 7.18184598 10.13395955 10.81606933 2.05512623 5.45602086 4.75558197 10.43668448 11.70293722 2.30307932 13.47473969 6.81336435 8.33823007 11.70451002 10.92820108 13.02488781 7.33126631 10.35635194 10.35291761 10.77054373 11.38535818 5.86892377 8.52580032 12.53964981 11.92077819 -0.94480435 10.15678895 8.50635281 1.86251090 2.38067404 9.80626718 9.16562483 9.57772300 8.25726526 15.05097494 10.79048600 9.27491506 8.72225322 -0.35993442 16.10092254 3.41270024 11.63704826 11.05971320 9.91584055 9.20298233 7.71870000 10.82795300 0.00000000 0.00000000 0.00000000 -0.00401620 -0.00401620 -0.00166290 -0.00304750 0.00069327 0.00069327 -0.00041585 -0.00041585 -0.00107330 0.00263570 0.00263570 0.00069327 0.00069327 0.00069327 0.00416320 0.00416320 0.00235810 0.00041593 0.00180300 0.00708260 0.00708260 0.00708260 0.00917050 0.00917050 0.00917050 0.00471900 0.00000000 0.00000000 -0.00083160 -0.00401620 -0.00166290 -0.00166290 -0.00304750 -0.00304750 0.00069327 0.00069327 0.00069327 0.00110930 0.00110930 -0.00041585 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00263570 0.00263570 0.00069327 0.00069327 0.00416320 0.00416320 0.00416320 0.00235810 0.00041593 0.00180300 0.00346870 0.00708260 0.00708260 -0.00318590 0.00917050 0.00917050 0.00471900 0.00121480 -0.23521000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.40718490 11.50892660 6.46453268 9.82415286 4.06770755 11.29025828 -1.94508208 NA 8.53593163 7.01803768 NA 6.36802446 -0.35993442 9.84100273 9.42473884 1.86251090 1.86251090 9.60588838 14.36433366 11.46174520 10.02203984 9.31664878 11.81897635 4.46453105 10.25389357 10.20869356 2.69899630 NA 10.71602881 4.00933821 12.61122843 12.54599242 8.06776616 10.14061405 8.46665240 8.98366003 0.05519565 4.05514358 0.64006558 5.32192809 9.46506270 10.01622942 9.99545512 1.75557128 9.30156753 7.04949464 10.53365844 4.87531809 9.59865682 0.37706821 12.01559607 2.30307932 11.23256111 9.25985952 7.43577609 -1.94508208 8.75123976 7.70260006 9.35835142 NA 13.21023648 -0.94480435 10.39915998 0.37706821 5.81669186 3.54699321 7.49185310 9.45762076 14.524530 5.438845 8.873724 13.184022 10.348613 10.396660 13.207387 13.760180 8.948132 10.801026 12.430656 10.453618 8.975494 8.253587 1.055126 7.836501 9.988832 10.84711836 5.34976157 7.80668559 8.98809442 9.45975086 10.58783835 8.15185679 5.20488801 11.43573791 7.21753319 2.14260949 2.91312877 8.25711861 9.37988474 10.20584089 9.81540411 9.35091046 12.81679666 1.96203071 10.70507127 11.86812102 15.06234406 9.85077536 10.39415644 9.45975086 NA 9.53856435 4.91312398 -1.94508208 10.81606933 0.05519565 11.33765083 10.43668448 7.73813618 12.94863269 10.54574177 10.12626863 12.82249842 9.35892235 9.80291503 0.37706821 TCGA-LL-A50Y 84 0 NA 231 breast stage iia t2 n0 mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 271.28.0 NA NA 2 2 NA NA 1 4 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 3.337367e-07 10.52510722 3.72023468 6.35964240 11.75026201 NA 9.10460033 2.72023468 7.80115154 10.71371437 12.84584374 9.02541644 7.26296584 8.08048765 9.15036242 7.19970081 8.82875596 10.40241586 9.11254898 6.19970179 3.66365203 11.56548037 11.26177502 11.70124992 11.16795065 8.74089114 9.72628782 6.70629294 9.47614632 -0.98022693 NA 6.56668579 8.92818435 11.53942813 6.07507476 13.83252070 13.01996796 10.02260681 4.63450034 3.01979086 5.18971784 7.53549157 9.32471364 5.80115089 12.99043704 NA 11.93697745 14.01644188 6.35070939 10.75035963 9.85663126 5.97398774 6.74771232 1.01977307 14.91963707 10.54286366 1.60473557 7.73403756 NA 2.82714832 8.84315916 9.33154019 10.16253710 11.03031994 8.87932654 9.32699275 1.82712799 9.55506724 9.89707596 7.53154444 8.50963963 7.89015664 11.11946843 13.16914206 5.43307963 9.94534624 9.68690334 6.70629294 1.34170116 7.69221725 6.87777247 7.05321454 10.70629242 -0.98022693 5.61970352 7.36408737 8.75111085 10.28716382 8.19970081 5.39482965 3.54335977 9.26296584 11.59627619 3.72023468 13.51145709 7.32813095 5.96230609 11.83297180 13.45246424 11.86410534 8.78797632 10.92292055 10.30634963 9.88942426 9.80769446 0.01977307 9.89784273 11.19689992 7.22436254 NA 10.03381239 6.95642959 NA 1.34170116 8.79293114 10.27186590 9.01979197 8.33720442 14.59952027 9.50259972 8.09393354 8.59533097 1.34170116 17.12310528 10.24740776 11.60475438 11.65777517 9.74856270 9.78217395 6.35070939 10.66320619 -0.0059858 1.2705000 1.2705000 -0.0055375 -0.0055375 -0.0138340 0.0000000 -0.0026322 -0.0139530 -0.8299300 -0.8299300 -0.0051011 0.0130740 0.0130740 0.0052749 0.0052749 0.0052749 -0.0052610 -0.0052610 0.0104240 -0.0011087 0.0139110 0.0148880 0.0148880 0.0148880 0.0044411 0.0044411 0.0044411 0.0263730 0.0112610 -0.0059858 -0.0138010 -0.0055375 0.0075000 -0.0106460 0.0000000 0.0000000 -0.0026322 -0.0094392 0.0073609 0.0058309 -0.0018014 -0.8299300 0.0084399 0.0084399 0.0090312 0.0090312 0.0130740 0.0130740 0.0052749 0.0052749 -0.0052610 -0.0052610 -0.0052610 -0.0037395 -0.0011087 0.0139110 -0.8593200 0.0148880 0.0148880 0.0231450 0.0044411 0.0044411 0.0263730 0.0066590 -0.8564100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 8.5275865 12.9385620 3.1897139 9.6609404 4.1897139 11.2120847 3.1072527 NA 9.5628238 7.0858814 NA 5.0421584 2.3417296 10.0764296 9.5354918 2.0198086 5.7879757 7.8495146 10.9808797 11.7871487 9.8375190 5.9623061 10.3195722 1.3417012 7.6085062 9.3269927 5.4627362 -0.9802269 10.8044267 1.6047356 12.9877386 12.4478903 7.0027858 9.8629277 8.0532151 10.1733438 1.3417012 3.5433598 NA 4.1072527 9.8198829 11.4879067 10.0682788 2.0198086 9.4134291 8.9534826 10.5652390 5.8777737 9.9047255 NA 10.9153672 0.6047356 4.2677231 9.3529472 6.7838010 4.9505291 9.2194643 7.6600366 8.4585838 -0.9802269 13.9274337 NA 10.8411673 NA 7.4914667 4.3417225 6.6491484 9.3201444 13.453019 4.341723 8.479223 13.832521 9.913852 11.387207 12.990437 11.544089 8.549222 9.476146 12.293296 8.505621 7.053215 9.361867 1.341701 7.058710 9.913093 10.18092372 5.39482965 8.83357292 8.66003691 7.45442022 9.72186068 7.61970498 7.98845861 11.16795065 7.51963783 -0.98022693 8.96669809 6.72790957 7.66003655 9.64550065 7.91460937 10.06486898 5.55895024 5.66364918 10.16253710 10.58441772 10.34171995 8.71153552 9.76378468 6.34172073 NA 10.25536335 6.03102018 6.39483136 10.28716382 4.74770963 10.75872857 9.26296584 6.76125867 13.99595319 10.84713457 10.50108679 12.17255202 10.94349078 9.14002961 0.01977307 TCGA-LL-A5YL 64 0 NA 519 breast stage iib t2 n1a mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes 3 white not hispanic or latino 305.23.0 NA NA 2 3 NA NA 2 3 2 2 3 2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.251513e-06 5.006051e-07 11.4545586 5.7699648 6.3664219 10.6948242 NA 8.6574896 NA 8.4408044 9.8642004 10.0160682 9.1045324 6.3355619 7.7020251 9.1317327 6.3510753 8.5969702 9.1429163 9.2346326 7.4188899 3.5590635 10.2502294 11.4895858 10.1266716 10.9840891 9.1694089 9.7843196 7.0941991 10.0105839 0.8042188 4.6370711 8.0209261 11.3387260 11.6217633 6.7525466 13.5685333 12.5692588 10.5312496 6.6433844 -1.1959464 6.2304451 7.8809958 9.9198740 6.8540281 12.2692361 NA 10.8662261 12.8120833 7.7020251 10.5592178 9.8956154 9.8789904 6.6621613 NA 13.8712580 11.2476183 NA 8.2960329 0.3891262 3.7583778 9.0532936 10.1451427 9.3452766 10.5557240 9.4588161 9.9646818 7.2879958 9.8614948 9.8989176 5.9840880 9.1339762 2.9741071 9.7714063 14.1090304 4.8588115 9.4170485 8.9715982 8.5252792 4.1964969 6.2135709 8.3394554 7.2093218 9.8601402 NA 5.3433403 6.7050462 9.2799135 10.6929233 4.5046204 5.3587690 3.3277448 9.5063526 11.8122584 5.3277412 13.6481010 6.9022123 6.5523725 11.1443082 13.4579208 11.7127602 10.0075280 11.1404076 9.8869944 9.8655511 8.7304759 0.3891262 10.0093623 10.9357154 11.0913152 NA 9.9940046 8.3257804 -1.1959464 4.1617345 8.4677380 10.8550489 9.2429718 8.4096595 15.4403373 9.6457443 8.3966369 5.7583751 1.1261139 15.1164248 8.5235686 13.4695714 12.7507208 8.9989367 9.1261082 6.1440300 10.1445865 0.64598000 1.41860000 1.49110000 -0.53701000 0.00979450 0.00763920 0.00388540 -0.00069303 -0.00069303 0.00049443 0.00049443 0.01112100 0.00555290 0.00555290 0.00041593 0.00041593 0.00041593 -0.00615870 -0.00615870 0.00000000 0.00221930 0.00471900 -0.01147300 -0.01147300 -0.01147300 -0.02219500 -0.02219500 -0.03040400 0.00319100 -0.50970000 -0.51880000 -0.00401620 -0.51414000 0.00763920 -0.00304750 0.00388540 0.00388540 -0.00069303 -0.00069303 -0.00069303 0.00000000 -0.00415460 0.00624810 0.00138680 0.00138680 0.00138680 0.00041593 0.00555290 0.00555290 0.00041593 -0.52589000 -0.00615870 -0.00615870 -0.00615870 0.00000000 0.00221930 0.00471900 -0.51094000 -0.01147300 -0.01147300 -0.51373000 -0.02219500 -0.53134000 0.00319100 0.00249690 0.03199900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 -0.510 1.491 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 -0.510 1.491 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6989977 13.2214392 7.2093218 9.0245582 3.7110653 11.1272347 4.8702710 4.0895829 9.8856634 8.7525472 -1.1959464 6.6806971 5.0709646 10.5941211 9.7371329 4.9741071 7.2839607 8.9283013 11.5000607 11.1773170 9.8207864 6.0895829 9.8140086 0.7072597 8.7080617 9.9646818 3.8485779 NA 10.7630952 3.1261139 12.6550505 11.9582069 7.6211640 9.9231211 9.0580275 10.4417106 1.9740887 1.3891262 NA 10.7027813 9.0872684 11.1289231 10.8648759 4.1261056 9.5237056 10.6971022 10.5781434 5.9437315 9.7864606 NA 9.5456470 0.3891262 4.2636129 9.8187654 6.0803038 3.9741071 9.1440300 8.0686224 8.1261082 0.3891262 14.3785665 -0.1957812 10.5188548 -0.1957812 7.8594621 4.8041775 8.1440300 10.0130239 11.3987285 7.9488385 8.8540284 13.5685333 10.3839673 12.2499708 12.2692361 9.6441710 8.6050798 9.3928946 12.8025060 9.1661237 7.2093218 9.3692822 0.8042188 7.4836602 9.8526668 10.2220325 4.3587690 8.3413983 8.5707088 8.2839602 8.9072055 7.7928645 6.0895829 10.9840891 8.0895824 NA 10.3447924 6.4429054 10.2141012 10.0419875 7.5789674 10.3040259 3.1261139 5.8376027 9.3452766 10.5261336 10.4036280 9.5295463 9.6362788 5.1440300 0.8042188 8.9347633 6.1261077 6.9840892 10.6929233 6.0895829 10.0568454 9.5063526 7.3702340 14.1282902 10.1221579 9.8048843 12.0753512 12.1668088 8.9551965 NA TCGA-LL-A5YM 88 0 NA 466 breast stage iiib t4b nx m0 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 296.27.0 NA NA 1 3 NA NA 1 1 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.668684e-07 12.2304716 5.6270377 5.1356498 12.1004283 NA 7.6960084 1.0271541 7.6455093 9.6763797 9.2462922 9.0029717 6.0824067 7.6709798 9.7936526 5.3125272 7.8663275 8.7310271 8.8360876 5.2750518 3.4865599 9.7669042 11.1535054 13.4050119 9.4700670 8.2316945 10.1800422 5.9219409 9.3557986 -0.9728459 NA 6.1666753 10.1072749 10.4178299 8.4596656 14.0502715 12.0622663 11.3777866 6.8663269 4.2750518 9.0932129 7.1970486 6.8974885 6.3032474 12.2903928 NA 10.4638352 13.8121673 NA 11.0899994 8.9637617 8.7379301 9.5129530 NA 14.4917057 9.4834780 -0.9728459 7.2218800 NA 3.8344786 7.6418336 8.2462922 9.8060221 5.5028557 7.4407513 10.4942196 2.7275720 10.5462684 9.5931776 4.9340163 8.3009190 1.6120694 5.8600143 14.1057331 3.5291963 8.6436726 9.4512898 6.5189773 0.6121166 6.7413686 5.5189757 7.1251562 8.0796917 NA 4.9097683 6.2750518 10.1531826 10.1926587 4.1970476 3.2750518 4.8600143 8.0687826 11.1185589 8.2679150 14.0974123 4.8084829 4.1970476 11.2444755 11.7586548 11.2625395 10.6102064 10.8109403 9.7903360 9.9703710 8.5855443 NA 9.9325106 10.5860225 11.4512898 NA 9.2511252 7.8247850 NA 1.3490255 7.9784084 10.0001034 8.3125259 8.5604532 15.6304457 10.7953079 7.5931775 4.6418350 1.6120694 15.9837039 4.9813184 10.6125556 10.8816024 8.9204252 9.3691982 4.8600143 9.8117666 -0.64246 1.02140 1.02140 0.19527 0.20962 -0.21812 0.67884 0.15540 -0.65454 -0.24642 0.27332 1.21540 0.78910 -0.65882 -0.65389 -0.65389 -0.65389 -0.66671 0.19299 -0.63510 0.19654 0.16505 -0.69432 0.91420 0.91420 0.06537 0.06537 0.06537 0.14355 -0.70379 -0.64246 0.00000 0.20678 -0.21812 -0.20274 -0.15886 -0.14901 0.15540 -0.65454 -1.29290 0.10934 0.17633 -0.67343 0.18525 0.18525 -0.66383 -0.66383 -0.65882 -0.65780 -0.65389 -0.65389 -0.66671 0.22068 0.14846 -0.63510 0.19654 0.16505 0.14221 -0.69432 0.91420 -0.21923 0.06537 0.06537 0.15472 -0.26360 0.14950 0.822 0.183 -0.654 -0.654 -0.505 0.148 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 0.822 0.183 -0.654 -0.654 -0.505 0.148 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 7.29858684 12.13286842 5.61208706 8.64367260 NA 10.96633543 0.61211655 0.02715405 9.82883195 7.02147751 -0.97284595 6.72061091 5.92194088 10.22188046 9.31252587 1.83446852 6.64183356 8.04393173 7.08781923 13.14492899 9.13172220 5.72756382 10.81094029 NA 9.99290790 10.49421958 2.34905383 NA 11.02430306 1.83446852 12.51408425 12.75791211 6.51093977 8.48860297 7.95786064 11.24113909 0.61211655 4.75504245 NA 2.83446852 10.29449554 11.10159959 8.82153931 4.38467843 9.03945483 9.88898596 9.69866456 2.48655993 10.65009056 NA 10.14281751 NA 8.17940854 9.70162477 8.57944681 4.86001426 8.74993109 8.48245062 8.93551632 0.61211655 14.16359408 NA 11.97676795 NA 8.56434196 3.72756110 6.51093977 10.46175179 12.386972 7.494729 8.532935 14.050271 9.147361 11.254439 12.290393 12.137933 8.229248 8.522978 12.110104 10.004403 7.125156 8.510939 1.027154 7.815026 8.486555 9.4375750 4.8084829 7.3934454 8.3240396 8.7048256 7.7636944 6.0158075 10.0036877 9.4700670 9.6799686 -0.9728459 4.2365768 7.6248780 6.9158662 7.7101183 8.3195601 10.7865957 2.3490538 4.8600143 9.8060221 11.0122540 6.8150259 9.2892185 9.7652158 5.6995489 1.3490255 9.4271385 4.5189757 5.2939112 10.1926587 6.8663269 9.5269694 8.0687826 6.4947292 13.5964452 10.5619128 9.1653955 12.6199310 10.0467144 8.1970486 0.6121166 TCGA-LL-A5YN 46 0 NA 447 breast stage iia t2 n0 (i-) m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 296.27.0 NA NA 4 5 NA NA 1 3 1 1 3 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.840393e-07 5.562279e-08 11.41490057 5.77765379 5.06340803 11.50064109 NA 8.40325920 0.06336488 7.76384907 10.70093972 12.36476247 8.95519276 6.67811840 8.23333399 9.80908351 5.88358905 9.13218738 9.07463655 9.40214551 6.92138991 3.76384708 11.13319456 10.37912479 12.58169348 10.50324010 8.98376205 10.05138366 9.75253352 9.06481739 0.64837340 3.06341665 8.31843796 10.24145148 12.23833484 5.23333590 13.82334936 12.25739648 9.14156001 7.38082207 2.52283415 7.01177627 7.81160204 9.76124554 6.83159354 12.25570198 0.99320335 11.84251291 13.42651727 6.77765510 11.10591329 10.20168103 8.43627430 7.41213708 0.64837340 16.24794702 13.32307889 0.64837340 8.73936613 NA 4.01760127 9.20806752 9.70996795 9.25076124 9.15219737 8.92139021 10.10985115 3.58696886 9.63231530 10.26246804 7.38533698 7.39432635 5.72162147 10.35688086 13.89802835 5.87346626 8.80318990 9.09683215 8.85457202 1.87077897 2.97030150 8.53305090 7.18235065 9.27529741 NA 4.99414522 7.29702905 9.54923848 10.15484456 8.02919335 6.54722462 4.55526400 8.46215296 11.72117418 6.61799779 13.30531786 6.92138991 6.55526246 11.04747152 12.64060193 11.85924591 9.25939655 10.80908351 10.18235028 9.80824297 9.54318943 1.38532059 10.22642977 11.40214556 9.93454437 NA 10.32785182 9.27894212 0.64837340 2.97030150 8.41876045 11.14854960 8.92914240 9.13888843 14.95881878 10.12949837 9.20296054 7.88039289 2.38534820 14.81136609 9.40437203 12.44900199 12.35414804 10.18882260 9.87638863 6.41213793 10.40881438 -0.0414310 0.5594800 0.5739800 0.0153080 0.0144700 -0.1062900 0.0452820 0.3055300 0.2148400 1.5633000 -0.2962700 0.9994500 -0.0715490 -0.0715490 1.8363000 -0.0040162 -0.0040162 0.0234260 0.0210430 -0.0340960 0.1150600 -0.2306500 -0.5125900 0.9686400 0.4044400 0.3181900 0.3181900 -0.0053992 0.2791600 -0.0414310 -0.0414310 0.1469700 0.0153080 -0.2032400 -0.1062900 -0.2310300 -0.2310300 0.3055300 -0.2399200 -0.4183100 -0.0327230 0.0087528 0.9403700 -0.0582880 -0.0582880 -0.0582880 -0.0582880 -0.0715490 0.0496820 -0.2278500 -0.1103700 0.4980500 0.0210430 0.0210430 -0.1383800 0.0000000 -0.2276100 -0.2178700 -0.0193140 -0.1430200 0.0034687 -0.1540000 -0.0053992 0.2791600 0.0158660 -0.2407000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.559 0.279 0.279 0.000 -0.241 0.137 0.137 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.703 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.559 0.279 0.279 0.000 -0.241 0.137 0.137 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.703 0.000 0.000 0.000 10.8353112 12.4166939 6.8513118 9.8357237 7.1719334 10.8270365 7.6558663 NA 9.7586375 7.3580296 NA 6.0520941 4.4896714 10.3260914 9.8779916 4.5552640 8.2655330 8.6817946 9.7655818 11.8303521 9.3377407 7.2433187 9.4231588 2.6483734 8.4833692 10.1098512 4.8447673 -0.9364971 10.8943205 3.8182984 13.4227469 12.6213514 7.1823506 8.9322316 10.6716640 10.2916266 5.5869719 1.0634339 NA 9.4780943 10.3366219 11.1884997 9.7189399 2.5228342 8.8091340 8.6313652 9.8978802 5.7638497 9.9468161 0.6483734 10.9676674 2.3853482 3.2333359 10.1344692 7.4391003 7.0234106 10.3660481 8.7054610 9.4546528 -0.9364971 14.1334462 1.0634339 11.0985519 0.6483734 7.3160742 4.3113360 7.5552625 7.8771903 11.562640 7.774216 8.197835 13.823349 10.185590 10.517194 12.255702 10.767745 9.176917 9.679039 12.653996 10.900643 7.182351 9.359178 4.017601 8.011776 9.295830 10.4154526 4.1508683 8.7879231 8.6464921 7.2182271 9.8287368 9.5850097 7.8578249 10.5032401 7.6964042 0.6483734 8.1428938 7.4002724 7.8899578 10.8464074 8.6122312 9.7287450 4.8182984 8.5472250 9.2507612 10.8439489 8.4187605 9.4088144 10.5366076 5.2728630 NA 9.9883108 6.9521530 8.9491056 10.1548446 4.8447673 11.1197082 8.4621530 7.4514263 14.5736170 10.1482175 10.1152978 11.9180828 11.1169957 9.2395823 2.0633994 TCGA-LL-A5YO 50 0 NA 440 breast stage ia t1b n0 mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 296.27.0 NA NA 2 5 NA NA 2 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.065304e-07 1.668684e-07 11.4616443 5.3093581 5.6312877 11.7272119 -0.8606615 10.3131116 -0.8606615 8.3897329 11.1383773 9.8976576 8.9191538 7.3341910 7.8012123 10.5896146 5.8809010 9.1109781 9.3956432 9.9500061 8.2189192 6.1394347 10.9635976 10.5541196 12.2187525 10.6737373 9.1851941 10.3415583 9.6863289 9.9370960 0.7243883 2.4613714 9.4859482 10.0657304 12.7626300 7.2635556 12.4734283 11.9224326 11.1569388 5.9338511 1.1394040 6.2891816 8.7796793 7.1052192 6.3586037 11.4776137 -0.8606615 12.9580166 10.7513814 7.7393472 9.9981381 11.1433037 7.5231385 6.4155593 3.2268938 15.4068940 13.9001544 1.7243883 9.7476892 NA 6.2374662 9.7309568 9.6009138 9.3464488 10.0220774 9.2189192 10.2427222 4.5657007 10.5875507 10.7398120 5.4792855 7.4658643 5.6312877 7.9240690 14.1825899 7.3172028 9.6292823 9.2321916 9.4725897 3.1394368 2.8398790 7.8605333 8.3706556 10.6131402 -0.8606615 4.2687188 6.9009851 10.2162500 9.7596542 6.1281181 8.3968222 6.4523170 8.9707418 11.9133978 -0.8606615 13.2527696 4.5988654 6.3968222 11.6734941 13.5775765 11.9534160 7.5101217 10.4173030 10.3694548 9.6671264 10.3628328 3.5988654 9.4062210 12.1675131 9.7967528 NA 10.3236899 9.7196931 0.7243883 2.7255885 8.9076187 11.0954475 9.3549674 9.0804821 15.1160657 9.7805831 10.2135758 6.1618031 4.1394368 14.4150133 9.4236803 13.0242727 12.0034270 9.9675710 9.8528210 7.6111097 10.2687561 0.10133000 0.10133000 0.10133000 -0.02835500 0.05822400 -0.04813200 -0.04801600 0.00000000 0.00000000 -0.17702000 -0.17702000 0.59069000 0.11038000 0.11038000 -0.04238100 -0.10715000 -0.10715000 -0.08601000 0.01279500 -0.24671000 0.14652000 0.02048300 -0.10342000 -0.10342000 -0.10342000 0.09856000 0.09856000 0.09856000 0.09246000 0.10133000 0.10133000 -0.07553800 -0.02835500 -0.04813200 0.03707600 -0.04801600 -0.04801600 0.00000000 0.00000000 -0.12649000 0.03933700 0.02358600 -0.17702000 0.05252500 0.05252500 0.00987340 0.00068205 -0.11665000 -0.11665000 -0.04238100 -0.10715000 -0.08601000 0.01279500 0.01279500 -0.23195000 0.14652000 -0.00492470 -0.05684600 -0.10342000 -0.10342000 -0.14207000 0.09856000 0.09856000 0.09246000 0.48492000 -0.11652000 0.110 0.110 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 0.110 0.110 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 11.0128786 12.8502409 3.0463164 9.1851941 7.3391071 10.6776234 7.6151676 2.4613714 9.6892191 8.5424465 3.1394368 7.3668100 4.8943230 10.7596542 9.8968245 2.9467870 9.0448214 9.0760724 9.3131116 12.1410185 9.4167684 6.5057560 10.2590241 2.4613714 7.1450589 10.2427222 3.7832890 NA 10.9997455 2.9467870 13.1646605 12.7512661 7.8502406 10.1217151 9.5709321 10.6737373 3.7832890 2.9467870 0.7243883 2.9467870 9.4759409 10.3956431 10.3168540 3.2268938 10.2172916 9.4737078 10.6452460 5.7687904 9.5968153 0.1394695 11.6985725 4.4613648 3.3873625 9.8677036 6.4018113 8.8792150 10.5865176 9.2904509 11.5916757 7.4340552 13.9336472 0.1394695 10.8592510 -0.8606615 8.5968152 3.9467870 8.7430608 8.9927441 9.661977 9.811860 8.672764 12.473428 9.730957 11.207541 11.477614 8.808319 8.716863 9.733759 13.053820 10.453451 8.370656 8.527452 4.268719 7.396822 11.177324 10.784192 5.694022 9.080482 9.003621 6.997415 9.783498 9.708341 8.919154 10.673737 8.061276 1.461371 5.116714 9.109627 10.471471 11.465583 8.869055 9.534969 7.363436 10.031218 9.346449 11.058670 9.882586 10.709290 10.316854 6.686328 5.289182 10.146952 8.129539 10.330494 9.759654 5.709291 11.047452 8.970742 7.553062 13.971484 11.122072 10.782389 11.816714 11.964592 8.988057 4.694022 TCGA-LL-A5YP 49 0 NA 450 breast stage iib t2 n1a m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 296.27.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.668684e-06 3.337367e-07 12.1636986 7.4207030 6.2725010 12.4202268 NA 9.1237753 NA 8.4034705 11.3562370 7.6684298 9.3027650 7.1765771 8.9605572 9.9980319 7.4092373 8.4433634 9.7816858 10.9072167 8.7660405 7.5585523 11.5197624 11.9644793 12.4686682 9.8211540 8.9526807 10.4391414 5.8770154 10.5039048 4.7372920 0.4395699 8.1720614 11.0972273 12.4211784 8.3564859 11.5872400 10.8182672 10.9516931 6.5341285 2.4396231 9.9631731 9.2608537 9.2264252 7.7794613 6.5057004 NA 11.8777099 8.7868632 8.2640395 10.1759397 9.6498766 8.9916398 7.1354189 2.6620004 14.1010311 12.2349744 4.9839330 8.1765766 NA 4.7372920 9.3850550 9.7365273 9.4101963 8.7883392 9.2044826 10.3971968 3.5550922 9.7326995 11.0132583 4.4693585 6.5411493 -1.1452862 5.6360097 15.9194545 7.2704747 10.8193505 8.9234270 8.2318591 3.3140874 2.8546540 8.4377313 8.6843713 10.3634338 NA 6.2209703 7.5235337 10.0592198 10.3884650 6.5961152 6.5550876 4.8546490 8.7912866 11.7521160 3.3140874 13.5461741 4.5550860 7.0395245 11.5281785 13.8453731 12.1212888 8.5270739 10.9095921 10.3796800 10.1485570 10.4688983 3.3782064 8.4471055 11.1365786 8.4693585 -0.1452862 10.7997266 9.6045180 -1.1452862 2.5550799 9.4358492 11.5299441 9.4330214 8.6162000 14.4307196 11.0059823 9.0043958 6.5620073 2.8546540 12.0470955 5.2296879 12.3746534 12.7829819 9.5030062 10.9945197 7.2426663 11.0286817 -0.262520 2.348100 0.461890 1.821700 0.432770 0.399380 0.811190 0.032612 0.032612 -0.419480 0.976050 2.097900 0.031436 -0.052126 0.279310 -0.385490 -0.385490 0.384360 -0.399860 -0.244480 -0.393080 0.374950 -0.411900 -0.076812 1.171200 -0.410800 0.396920 0.550000 0.462460 -0.349160 -0.285720 -0.045499 -0.395080 -0.519450 -0.105520 -0.400190 -0.401520 0.162060 0.032612 0.361330 -0.234100 -0.366120 -0.426480 -0.091155 -0.098286 -0.205350 -0.279330 -0.053206 0.117560 -0.421890 -0.361810 -0.374140 -0.136920 -0.136920 -0.985060 -0.396830 -0.395750 0.246380 0.165200 -0.076812 -0.117960 -0.444970 0.550000 -0.397970 0.752230 -0.054690 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.000 -0.205 -0.205 0.000 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.000 -0.205 -0.205 0.000 8.411155 14.448273 5.454561 10.204483 1.383220 11.504129 1.176578 3.102574 9.794228 8.476700 7.579163 8.278815 4.314080 10.559417 9.220971 4.140051 8.340478 10.385055 8.076236 10.876323 8.149614 6.297591 11.754949 1.176578 7.693852 10.397197 5.609536 NA 10.748329 3.439610 12.207658 13.005744 8.868669 9.424504 8.679607 10.828346 5.194497 3.439610 NA 5.454561 8.776490 9.443363 5.622834 4.877018 10.004631 7.773512 10.122606 5.083469 10.552919 6.989075 10.801920 4.469359 3.942111 10.321556 6.641637 6.527073 9.651499 8.572325 8.834788 2.314087 12.800732 2.854654 11.497152 1.176578 8.631082 6.454561 8.572325 8.095440 10.269112 8.637647 8.370348 11.587240 8.982643 10.483550 6.505700 10.067753 8.890822 10.513753 14.031601 11.870586 8.684371 7.808845 -1.145286 8.032068 10.219877 11.329875 4.246963 8.591051 8.409237 8.280913 9.970460 7.609536 5.687539 9.821154 11.467978 4.808843 9.964479 8.725275 11.952516 9.870064 7.994200 9.343493 8.619520 6.505700 9.410196 10.098418 12.113362 11.569967 10.360460 7.690699 NA 9.756941 7.909497 7.609536 10.388465 7.516427 10.933113 8.791287 7.004396 13.452119 10.058608 10.096632 12.436438 11.212475 8.989075 2.662000 TCGA-LL-A6FP 90 0 NA 352 breast stage iia t2 nx mx 2-10-2014 female 2012 NA yes infiltrating lobular carcinoma yes NA white not hispanic or latino 322.22.0 NA NA 3 2 NA NA 1 2 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.43330219 2.33350961 6.53514938 12.57676941 NA 8.17313993 1.42664048 8.10081790 10.61891825 11.42820961 9.06415614 7.43505430 9.06234355 9.08662138 7.13052938 8.48596975 10.04546973 9.04501096 4.47101833 -1.57346686 10.28305095 9.79021277 8.33201237 11.51259579 8.32598223 10.09151711 1.88604282 9.38517820 -1.57346686 NA 4.86957040 9.80816846 11.39006349 3.55591429 13.44886323 13.96995944 6.95410207 6.81894257 2.51409700 7.74177504 7.17816984 8.56617699 4.53515093 12.69881783 -0.57346686 11.59090390 14.27005586 5.61644886 10.39029462 10.55203896 7.84658546 8.99837803 -0.57346686 13.47825503 9.46623006 NA 9.22266499 NA 2.01160298 8.72468813 9.82910462 9.86073239 9.59529758 9.54426860 8.40247363 0.42664048 9.73211721 10.00027259 5.91044006 8.91044126 1.01156720 10.47647404 13.27392755 6.87672321 10.53645617 8.95800685 7.13052938 0.42664048 6.50344097 6.49808808 7.24360911 9.90691073 NA 4.01158509 7.16133548 7.90640601 8.99363078 2.59655355 2.95018843 2.81895279 8.47647404 11.61490521 5.28460667 13.85361087 7.35143840 7.97159011 10.18067787 11.71448213 12.04776160 9.65904633 10.67573894 9.53710869 9.77313921 9.25237923 2.95018843 10.48427884 10.76619718 10.47851412 -0.57346686 9.94724418 7.84025361 NA 2.28160924 6.91044126 10.65784666 8.52465767 8.93738971 15.20950854 9.74177504 8.53906496 7.75305492 0.01163876 15.64488597 6.22752546 11.46982367 9.96092838 9.67158388 9.50943972 7.53515016 11.11654047 0.3951200 1.5227000 1.5227000 0.0105640 -0.0065868 -0.0051608 0.0081959 0.0056919 -0.0018999 0.0040243 0.0040243 0.0040243 -0.5568700 -0.5568700 0.0175440 0.0175440 0.0175440 0.5505400 0.5505400 -0.5672400 0.0225850 -0.5475400 0.0573680 -0.5271600 0.0380650 -0.5258700 0.0528100 0.0528100 1.1584000 -0.5394600 -0.5745700 -0.0171160 0.0105640 -0.0051608 0.0016642 0.0000000 0.0000000 0.0056919 0.0056919 -0.0018999 0.4840600 0.4735200 0.0040243 0.0263730 0.0263730 0.0263730 0.0263730 -0.5568700 -0.5568700 0.7294300 -1.2929000 0.5505400 -0.5861800 0.6039500 -0.5672400 0.0225850 -0.5475400 -0.5529600 0.0573680 -0.5271600 -0.5623600 -0.5193800 0.0528100 1.1141000 0.0300290 -1.2216000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.119 -0.549 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.119 -0.549 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 6.51938307 10.77480032 4.49271205 8.99172761 0.01163876 11.92497610 -1.57346686 NA 9.84921586 4.28460297 NA 4.18151605 NA 10.53318838 9.06867726 0.42664048 3.38082640 9.46760005 9.77480040 11.83402605 10.36521638 6.36326396 8.81248796 0.74854711 9.49942796 8.40247363 1.23401073 NA 10.50810891 -0.57346686 11.83522057 12.06811279 5.36913840 10.28188333 5.67455387 10.65243540 4.42662706 0.74854711 0.42664048 5.11312537 9.78692384 11.66099384 11.03441809 1.59655355 7.61926333 8.02281498 10.69399739 3.95018843 9.64639904 NA 10.06415600 -1.57346686 1.88604282 10.26450957 6.51238967 0.42664048 8.14601415 6.12011343 5.57637399 1.01156720 14.63341092 NA 11.05393138 NA 3.74855784 3.33350961 7.70739641 9.35366271 13.2443451 4.0990511 9.3016069 13.4488632 9.9511673 11.7899389 12.6988178 8.9204809 9.4227246 9.9979040 13.1646122 8.3305073 7.2436091 9.3662046 0.4266405 7.9164737 9.9768913 10.0994927 5.4153091 8.5180610 8.5074430 5.9423245 10.0791791 5.6745539 6.0339559 11.5125958 6.2339801 5.6745539 9.2331751 6.0785373 6.0190836 8.9541024 7.6792908 10.8162568 5.8189426 0.7485471 9.8607324 10.8863132 10.2363936 8.6372969 10.1003763 5.2721165 4.9184769 8.5028398 6.4039051 1.5965536 8.9936308 1.4266405 10.0307153 8.4764740 6.3866282 13.5672556 10.4241578 8.9955317 10.7786689 10.2689759 8.8942312 1.0115672 TCGA-LL-A6FQ 77 0 NA 80 breast stage iiia t2 n2a mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 7 black or african american not hispanic or latino 322.22.0 NA NA 1 3 NA NA 1 4 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.36986492 4.97998416 6.10372003 11.59029352 -1.08620104 9.05982789 6.09380522 8.42367061 10.84758632 12.41834222 8.99338028 6.29760046 7.38150142 8.84019160 5.89117612 7.68208024 10.63584924 9.56853171 5.65536328 5.89117612 11.02143968 10.63627623 13.48268305 10.99970002 7.96917813 10.18652544 5.14271567 9.13789719 NA 0.49886356 6.34852457 9.88400151 12.27693526 6.32328719 14.07384578 12.93609003 9.54689080 5.51380970 2.08382606 5.32328719 7.17599059 8.03542926 5.37332804 12.58444124 2.23581895 11.66920052 13.77546723 3.82078145 10.56422038 9.64436573 5.84463422 5.34015988 -0.08604789 15.49564333 9.87895841 -1.08620104 6.23582278 -1.08620104 2.37331412 8.72446713 8.91248610 9.88687536 9.04317852 8.73885429 9.90470867 1.49886356 10.25708136 10.07943078 7.18535913 7.70179785 0.91387554 10.76759505 13.66329371 5.04770415 9.86809192 9.08382075 6.02242108 1.23584958 7.43745747 5.65536328 6.42168953 9.57834287 NA 3.86809408 6.93070423 7.00665259 10.73726289 5.10372003 5.54325150 4.16182320 9.19698393 12.16241622 5.70831141 13.51508607 6.30621302 6.53594718 10.86262790 13.53050190 12.06602200 8.87823641 10.78078818 9.58985260 9.95965527 9.24928604 2.49886356 10.53731995 11.90948612 10.60520299 NA 9.98132995 7.80567939 NA 2.37331412 8.18535864 10.26040939 8.94731871 8.21995743 15.76663494 9.59776747 8.16892429 6.93070423 2.72124140 16.30160167 10.56718862 11.84942903 10.89760181 9.52952523 9.15349427 6.58632040 10.08319435 -0.0119340 0.5093200 0.5151900 -0.0135870 -0.0116300 -0.0185490 0.5204200 -0.0188120 -0.0189210 -0.0179880 -0.0179880 -0.0179880 0.5122200 0.5155400 2.8208000 1.0004000 2.5283000 0.5089200 0.4964300 0.5151900 0.5104800 -0.0151010 -0.0274270 -0.0274270 -0.0211450 0.2897100 0.3048400 0.3048400 0.5204200 -0.0184000 -0.0119340 0.0131650 -0.0115210 -0.0185490 -0.0156510 0.5204200 0.5235700 -0.0188120 -0.0189210 -0.0174390 0.5111800 0.5111800 -0.6964300 -0.5592900 -0.5556000 -0.5556000 -0.5700600 0.5155400 0.5155400 -0.8580100 -0.5572100 0.5089200 0.5007600 0.5007600 0.5059600 0.5104800 -0.5828800 0.5471200 -0.0274270 -0.0274270 -0.0079338 0.2897100 0.3048400 0.5057900 -0.0137250 -0.5904200 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.509 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.509 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 8.03801689 13.93708686 5.90258012 9.39064189 1.16182320 10.98368104 0.49886356 NA 9.46175404 5.42169122 -0.08604789 5.83275839 3.82078145 10.27693523 9.60214599 1.91391382 6.90824849 8.43745747 9.10618838 13.52324753 9.28182365 6.02242108 9.53960454 1.49886356 8.28240227 9.90470867 3.30621849 -1.08620104 10.22791227 1.23584958 13.12380585 12.09193796 6.93070423 9.27034766 9.20160789 10.46464244 -1.08620104 1.72124140 0.49886356 5.74678570 9.38658637 11.99238005 9.87317308 3.23581895 10.20157334 10.26538708 10.41970721 4.43746080 9.56853171 NA 11.08663564 -1.08620104 5.25374728 9.91858659 8.82859477 -1.08620104 9.65114302 7.85640997 10.12395816 2.72124140 14.75366532 NA 12.00218697 -1.08620104 6.40574905 3.00135189 7.46848476 10.62384099 13.8038249 6.2448129 8.5193752 14.0738458 10.4379475 11.2431314 12.5844412 11.9308780 9.1774701 9.7609529 12.7991153 8.7888769 6.4216895 9.4266361 0.4988636 6.7718763 8.7196393 9.40574863 6.62814075 8.79194655 8.22223462 7.24754306 8.68062325 6.34015988 8.55594726 10.99970002 7.08882109 -1.08620104 4.89117612 7.98827795 7.11356820 9.04060015 7.83275903 10.06554646 4.79654065 3.30621849 9.88687536 10.81928267 10.12821477 8.27583956 9.57745375 6.63499541 NA 9.15635515 6.09380522 3.00135189 10.73726289 4.52860257 9.82453844 9.19698393 8.20621732 14.67855992 11.21224467 9.30942974 12.00945747 10.88184231 7.78733973 -0.08604789 TCGA-LL-A6FR 50 0 NA 118 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 322.22.0 NA NA 4 1 NA NA 2 5 1 6 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.7800216 1.6386763 5.9314632 13.0546338 NA 8.4434571 NA 7.4147850 10.3153431 9.3935683 8.6743046 7.0309981 7.6113738 11.6671394 6.7176326 6.2825362 9.2882963 9.5658662 7.5694182 1.3167250 10.9250075 12.8952433 12.4095098 9.2839789 8.6454275 9.7863944 2.6386763 10.2258957 4.0171915 2.1240965 7.0783035 10.4220065 12.2121386 7.0309981 12.9794211 11.5277284 11.9889570 5.8866087 -0.6831592 9.2651199 7.1046554 9.4498950 7.2115700 4.8086064 NA 13.7662238 8.0948299 9.7524230 10.5491736 9.6907053 8.9296212 6.4252763 -0.6831592 15.2384186 8.4382862 NA 8.6431823 NA 3.1241130 9.7833391 8.4434571 8.7884280 8.1963361 9.3153432 10.5347104 7.3989018 9.3922318 10.8175946 6.0981121 6.6296349 1.6386763 9.7026151 14.7824466 3.4152043 9.0084961 8.6296357 9.1062863 4.5646830 NA 8.5928771 8.0275594 8.4356936 NA 6.7924858 8.2474899 10.2846994 10.1886580 6.5646800 5.2474908 5.0716383 6.4866774 11.5425626 5.2474908 13.5894554 7.2533909 4.9606090 11.0476474 15.5137582 11.1309346 9.2882963 11.1099496 10.1832590 10.0076237 9.5467731 1.6386763 8.8578495 11.2976063 10.1224966 0.9017261 11.1168437 7.9461091 5.1993975 3.7761882 8.1840313 10.8770855 8.6917920 8.1622428 15.8213700 9.7058463 7.9129426 6.3611472 2.3167540 11.0189254 9.0783040 12.9008931 11.0106752 9.2767546 10.4356938 6.9092103 9.6090973 0.250430 1.321700 1.342700 0.552100 0.724330 -0.333530 -0.041975 0.736250 0.763890 -0.368390 0.086190 0.561700 0.017123 0.017123 0.046558 -0.417070 -0.112860 -0.312490 0.018522 0.065368 -0.356920 0.717540 -0.817290 -0.057649 -0.036539 -0.136000 1.395200 -0.422760 0.875270 0.139940 0.250430 -0.284630 -0.184960 -0.817540 -0.333290 -0.352250 -0.360920 -0.405620 0.763890 -0.376280 0.026653 0.199540 -0.387270 0.401940 0.401940 -0.353960 -0.380560 0.017123 0.017123 -0.372450 -0.284420 -0.312490 0.018522 -0.010938 -0.332020 -0.074946 -0.227970 -0.025073 -0.029006 -0.036539 -0.357040 -0.224160 -0.426530 0.000000 0.048686 -0.394300 0.000 0.000 0.000 -0.262 -0.312 0.000 -0.332 0.000 -0.228 0.000 0.000 0.000 0.000 0.045 -0.341 0.000 0.000 0.250 1.322 0.000 0.000 0.000 0.358 -0.260 -0.260 0.390 0.724 -0.734 -0.353 0.000 -0.297 0.736 0.736 0.200 0.200 -0.369 0.560 0.048 -0.354 -0.248 0.000 0.000 0.000 -0.262 -0.312 0.000 -0.332 0.000 -0.228 0.000 0.000 0.000 0.000 0.045 -0.341 0.000 0.000 0.250 1.322 0.000 0.000 0.000 0.358 -0.260 -0.260 0.390 0.724 -0.734 -0.353 0.000 -0.297 0.736 0.736 0.200 0.200 -0.369 0.560 0.048 -0.354 -0.248 7.1496425 14.4580616 4.1241048 9.1046554 NA 11.2202580 1.6386763 4.0716426 9.8588173 10.9502021 8.4916784 8.9533773 6.2356160 9.9588044 9.2085365 6.0849380 4.6021540 8.9333015 6.0981121 11.0753924 8.6632663 6.0582191 10.0807949 1.8652062 8.6205336 10.5347104 4.2709475 NA 10.0084963 2.1240965 13.3145496 12.8209510 7.1496425 8.9017153 10.4180719 12.6635434 3.0171915 -0.6831592 NA 6.5551581 9.7628021 11.1583171 7.1369317 6.1622423 8.1229481 9.5928771 10.1353349 5.7924858 10.2378498 0.9017261 11.2232675 0.9017261 2.3167540 10.5277527 7.0041632 1.6386763 8.9424614 6.9240833 4.6743025 12.6168192 13.7759922 -0.6831592 11.5983930 NA 7.6743046 5.2236426 8.7004571 7.5503720 11.426884 9.120884 7.091540 12.979421 9.901715 11.932382 4.808606 11.551271 8.963797 9.414785 13.453183 10.068297 8.027559 9.561116 4.901716 7.322377 8.774134 9.2385937 5.2236426 8.8086058 9.3293773 8.0032531 8.1998235 4.8403122 6.1622423 9.2839789 11.6743047 1.3167250 11.0041284 8.2909952 10.0215210 9.1208838 7.1809385 10.7324944 2.3167540 -0.6831592 8.7884280 10.0783039 10.1685018 10.9300818 9.8383532 5.3391196 3.7090700 8.9332097 6.9678050 2.7761882 10.1886580 7.7218942 9.7565835 6.4866774 7.9927095 14.4071960 11.0766409 9.5322858 12.0135029 11.0674597 8.9314626 2.1240965 TCGA-LL-A73Y 67 0 NA 126 breast stage ia t1c n0 mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 4 1 NA NA 2 5 1 2 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.6094569 5.9324935 6.6899225 11.9014334 -1.4599727 10.8075469 NA 9.7557080 11.2384455 10.6239867 9.4679529 8.3149620 8.6500055 9.3297087 6.0479702 9.4508176 9.4365073 9.4410419 9.0108338 7.5457993 11.1288896 10.8764025 11.5410553 10.6522887 9.6552185 10.3659288 6.7151013 11.0744754 7.0118501 1.7100846 8.6539170 12.7872124 12.0165415 7.7665872 11.9267111 12.1756664 10.7085337 6.3793784 4.0947597 8.3950435 8.7262894 10.0966810 7.7809662 5.8347946 NA 11.4865330 7.4590381 8.7422987 9.5151918 11.3917288 7.8116380 4.1548829 -1.4599727 13.3466184 9.4994525 2.6276302 9.2046222 0.5401265 5.1251386 9.4463139 9.7869155 9.4782843 9.3934846 10.2362732 10.1649704 3.9996032 12.5477279 11.5452732 6.1767995 8.1119275 0.8621141 6.4105395 14.7371420 9.3198943 10.8902854 10.8275987 9.1335661 3.9324959 NA 9.2388797 9.2475340 11.1599364 1.1251221 6.3083591 6.6694577 10.1227874 10.7188398 5.7593423 6.8800255 4.9324912 10.3938743 11.5869579 1.1251221 13.2693177 4.2680975 7.2055108 13.4235342 13.1012839 13.4053283 6.9367793 11.3907525 10.7422988 10.6761535 11.3250142 4.9664397 8.1344997 11.6097926 10.4031996 6.2055118 10.1157142 10.2130422 2.9996032 4.9831167 10.0720437 9.2063990 10.1617690 8.8575876 15.6218144 11.2312641 10.5954574 8.7737946 7.4349926 11.7692942 9.0705812 14.0187234 12.6637306 9.5611548 10.1142954 8.3215349 10.0747648 0.3952900 0.6282500 1.1401000 -0.0131360 0.4331100 -0.0125760 -0.0183530 0.9285800 0.4364800 -0.1230400 1.5985000 1.6556000 -0.0078863 -0.0069062 0.4854900 -0.0215100 0.4285600 0.8852600 -0.0195080 0.4439200 -0.0092666 0.0104240 -0.0049844 -0.0049844 1.5608000 0.4065000 1.1098000 0.3802800 0.4605800 0.0447340 0.3952900 0.7663800 -0.0120240 0.5011600 -0.0143660 -0.0183530 -0.0183530 0.0267950 0.4364800 0.4364800 0.4706700 -0.0202220 -0.1047300 -0.0037395 -0.8302500 -0.0044312 -0.0044312 -0.0069062 -0.0052610 0.7286700 -0.0093538 -0.0078863 0.0114000 -0.0039796 0.4996000 -0.0092666 -0.0147780 0.2003000 -0.0049844 -0.0049844 0.0000000 0.4065000 0.3931300 -0.0210280 0.6894300 -0.0185310 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 0.000 0.000 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.426 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.509 1.613 0.000 0.000 0.230 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 0.000 0.000 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.426 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.509 1.613 0.000 0.000 0.230 9.8744483 14.2079518 6.3919241 10.4620159 5.8050860 12.8745181 4.5401761 6.3539566 8.0539025 9.6243190 5.9748023 7.7904736 6.5625431 10.5267281 9.8116380 1.8621141 9.5274391 10.0194501 7.9281920 9.3297087 10.1941441 8.3809528 12.1256070 1.7100846 8.4304392 10.1649704 3.8255821 NA 10.7200841 4.8800243 12.7115864 12.0197026 8.6526145 10.9949883 9.1930199 10.1921236 5.5288588 2.9996032 -0.4597743 7.9768866 8.7373917 9.3017262 7.0947639 8.6447738 8.3132649 6.8755651 9.9939600 9.1298262 11.1677089 0.5401265 13.3844884 4.7689941 4.9324912 9.5224913 5.9050981 6.4105395 10.0315270 9.5324052 8.2612741 1.1251221 13.4214802 1.1251221 10.6729959 -1.4599727 9.4790195 5.8530575 8.0870692 8.7773849 13.141013 7.162227 8.405908 11.926711 10.602558 10.920636 5.834795 11.763724 9.028015 11.667041 14.159449 10.472759 9.247534 8.964341 4.154883 9.556983 10.771096 10.964341 5.679725 9.228425 9.029019 7.752063 10.004971 8.057844 6.848514 10.652289 6.476813 5.140087 7.230173 6.933479 13.320869 10.361949 7.960135 9.642807 9.688652 7.930344 9.478284 10.179968 12.778580 11.941455 11.188083 9.029019 NA 9.572930 8.119227 7.776189 10.718840 7.425871 10.705383 10.393874 7.268096 14.195257 10.508482 11.158560 12.411984 11.058090 9.887796 2.710107 TCGA-LL-A73Z 55 0 NA 137 breast stage iv t1c nx m1 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 334.18.0 NA NA 2 1 NA NA 2 6 2 2 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.4581966 7.8854249 7.6049164 11.0062791 0.4619476 9.6939796 NA 8.7913811 10.8510520 9.5181446 8.8485397 7.3323230 8.3425623 10.3936810 5.9322785 8.9946391 9.6385472 9.8084723 8.5963847 4.9644587 11.2317964 11.6038528 12.6343861 10.8084723 9.5449946 10.1402652 7.0318142 9.9868071 0.4619476 1.8769982 8.8195104 12.3590477 12.9345648 7.5208520 12.5001917 11.7483238 10.9339724 6.2693137 4.6318842 7.6939796 8.5998035 9.4420982 8.6843510 11.7913812 2.1989341 12.3339921 11.3993324 9.3517160 10.0171036 10.5890931 7.2821377 4.8769982 NA 14.7557106 10.2569158 -0.1229625 8.5547158 -0.1229625 3.8769982 9.4628975 9.3946655 9.3768419 9.8889221 9.5808996 10.1058148 3.1249236 10.5244544 9.9484583 6.4694530 7.2301425 5.1989223 10.1159978 14.7146486 6.8745708 10.3995775 9.9055928 9.1612418 3.0469275 3.1989184 7.6049164 8.4769090 12.2273828 0.4619476 5.0469232 6.6907774 10.1507917 10.6323009 8.5757007 6.3926952 5.3364262 10.0791199 11.8409758 2.0469101 13.6952287 5.3688487 7.0618712 12.0795790 14.1917917 12.3278207 8.5154318 10.6628571 10.6587656 10.4572547 10.3517160 4.2345473 8.7458185 11.2487727 10.1243302 0.4619476 10.0362367 9.1177875 1.1989341 4.3045987 9.2487727 10.6176201 9.8649706 8.4200280 15.0514536 9.6451803 9.5405541 7.5208520 4.8077310 14.2800747 8.3343770 13.2592823 12.2898305 9.6368843 10.0292809 7.1009976 9.8280403 -0.0113350 0.2897700 0.2897700 0.0025533 -0.0350400 -0.1329000 0.0890810 0.0070826 0.3133800 -0.1614500 -0.1353600 0.7667800 0.2440400 0.2440400 -0.0343590 -0.0343590 -0.0343590 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0355240 -0.1300500 -0.1300500 -0.1300500 0.0132130 0.0132130 0.0132130 0.8272500 0.0104240 -0.0113350 0.0000000 -0.0350400 -0.1415500 -0.1329000 0.0890810 0.0890810 -0.0183530 0.0597570 0.1111300 0.3603500 -0.0040920 -0.1603900 0.0975420 0.0975420 0.0975420 -0.0022987 -0.1196500 -0.1196500 -0.0343590 -0.1402600 -0.1327700 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0355240 -0.0764120 -0.1300500 -0.1300500 -0.0916840 0.0132130 0.0132130 0.5746900 0.1283000 -0.0087146 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 9.060631 13.266224 6.006280 10.296956 3.631884 12.228625 4.431583 3.631884 9.205671 10.349687 -1.123120 8.246179 7.408377 10.898323 9.429665 3.631884 8.290624 9.796604 9.325112 10.425336 9.256829 6.469453 11.684955 3.269317 9.462898 10.105815 5.180776 NA 10.650547 4.162395 13.093969 12.358795 8.676278 10.210710 11.219349 9.815841 4.759641 1.876998 NA 3.046928 9.137916 10.299587 8.836998 5.831193 9.068487 8.606617 10.171042 5.747361 9.668159 2.461948 11.033079 2.336426 4.964459 9.375267 7.129709 5.105816 10.036867 8.157767 7.765740 3.461961 13.893978 1.684370 10.777108 NA 8.441146 5.631884 8.198924 8.978972 10.928497 6.734976 8.036868 12.500192 10.162976 10.781631 11.791381 10.412271 8.973711 9.826093 12.834642 10.598950 8.476909 8.192146 3.631884 7.687567 11.196950 10.9035195 5.5634968 8.8180437 8.9430853 7.8965867 9.7721623 7.7003634 7.0766681 10.8084723 6.0668211 4.5208497 8.2863868 7.3634690 11.2070726 10.4156699 8.1531203 10.0299146 8.2671650 6.4990486 9.3768419 10.7349771 11.1850506 10.1744856 10.0343430 7.2693137 NA 9.7763605 8.0219599 6.8542762 10.6323009 4.9855186 10.6587656 10.0791199 7.2778751 14.3744113 10.7992088 10.5730942 11.9881317 11.3763437 9.3189027 0.8769589 TCGA-LL-A740 61 0 NA 137 breast stage ia t1c n0 (i-) mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 334.18.0 NA NA 2 3 NA NA 2 6 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.5421790 4.0489598 5.6456037 11.0960155 1.0133551 9.7453320 NA 9.8607048 11.2063667 8.6456026 9.3735229 8.1852615 7.9321976 9.5656191 3.7358038 9.1782411 9.3487246 10.0928190 8.4793086 5.0133327 10.7347752 10.5493871 14.1956665 9.3024310 8.9274204 10.4446229 4.9951860 10.1108397 1.4987615 1.8613202 8.1549305 10.7061240 12.6921984 7.1630810 13.8076282 12.4235735 10.9906141 7.4090828 4.7574927 6.5431556 8.1508379 6.0401341 8.1343498 12.0694300 NA 11.5883061 10.4703046 1.8613202 9.0155868 11.4639269 7.3244011 8.7642088 3.2763627 13.4251248 9.2857307 1.8613202 8.5431552 0.6914448 4.9202266 10.2149681 10.0318126 9.1457055 10.1942379 9.4370804 10.5763398 2.1508521 11.4233615 10.2721358 5.7248303 7.4193265 -1.3086445 7.7548013 15.2224525 7.9372914 10.5087895 10.4739949 8.3097915 2.2763776 4.1176701 6.4858213 8.7316958 12.2255874 0.6914448 6.7026340 7.2838634 8.8283974 10.6597129 6.0133350 5.9675306 5.4056521 10.1155724 11.1727010 0.2763180 13.8478053 4.4193299 6.9202254 12.3406623 14.6395224 12.5212279 7.2838634 12.3421213 10.5552052 10.2269391 10.5755767 4.5242957 8.9393336 11.2903891 9.0664455 NA 10.3216732 9.0456554 -0.3086445 4.0636582 9.2450354 9.7289531 9.9434802 9.0804996 15.7072023 9.7378481 9.5171599 6.5368968 3.6455979 13.9770973 9.5131800 12.8156082 12.7218146 9.3970386 9.2763687 8.3796565 9.8471541 0.00320330 0.00320330 0.00320330 0.00000000 0.00139900 -0.00851060 -0.00248160 1.19300000 -0.59030000 0.56384000 0.56384000 0.55444000 -0.00511050 -0.00511050 -0.00801220 -0.00801220 -0.00801220 0.00612130 0.37821000 -0.00815030 -0.00068082 0.00181520 -0.53215000 0.02596400 0.02596400 0.02385900 0.00946130 0.00946130 0.58025000 0.00946130 0.00320330 0.00195400 0.00000000 -0.00544650 -0.00234420 -0.00248160 -0.00248160 -0.61891000 -0.58862000 -0.60410000 0.59549000 0.57085000 0.54631000 -0.00704540 -0.00704540 -0.00704540 0.00278670 -0.00511050 -0.00511050 0.47806000 -0.00801220 0.00070549 0.38041000 0.93510000 -0.00469570 0.00098286 0.00181520 -0.00123510 -0.53215000 0.02596400 -0.00525670 0.02385900 0.00946130 -0.00248160 0.00960060 0.00834740 0.000 0.000 0.000 0.000 0.000 0.378 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 8.7601843 14.2546620 8.5982967 10.0724083 2.2199894 9.4278081 2.6914002 -0.3086445 9.5353271 9.1103129 -1.3086445 7.4673781 2.4987615 10.5960407 9.5155694 1.4987615 7.4362401 9.3708861 8.4176243 11.2671817 10.6232628 6.9105744 11.7912470 2.6914002 8.7960049 10.5763398 6.4529578 NA 10.8331939 2.8613401 12.3884823 12.9936166 8.5571393 10.1134709 7.9951871 9.7742204 5.9393347 2.7788604 NA 2.3918502 8.6221434 10.3594047 9.9681122 3.5493858 9.5332772 8.2819931 9.7096063 6.2688348 9.6607926 -0.3086445 9.9773863 3.3352689 5.2149679 10.4697914 6.9808719 3.2763627 9.1762290 8.1651120 5.5242957 3.0837240 13.1861367 -1.3086445 11.1431324 NA 8.0042890 7.6998348 7.9581925 9.2555557 11.375210 5.939335 8.946435 13.807628 9.903294 10.316658 12.069430 10.200686 8.689997 10.164605 13.360346 9.482569 8.731696 8.207106 NA 8.497150 12.055404 11.0992050 4.5242957 9.3638314 9.6928142 7.5679234 10.0653534 7.3848934 8.6672542 9.3024310 7.7894384 4.1832562 4.9008571 7.7393209 11.3433547 10.2536486 7.7946940 9.8650832 8.8411533 5.7358010 9.1457055 10.1359034 10.3638315 10.4575209 10.0150239 8.3171150 NA 10.6429131 6.8608300 4.6221456 10.6597129 7.4462935 10.8452748 10.1155724 7.0533503 13.6903931 10.2631587 10.3051956 12.5599393 11.0737600 9.4039332 -0.3086445 TCGA-LL-A7SZ 49 0 NA 170 breast stage iib t2 n1a mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 360.15.0 NA NA 5 5 NA NA 1 3 1 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.9758030 4.3369332 5.6884014 11.9065240 NA 8.9031154 NA 7.9587296 10.3554662 10.6693913 8.9607486 6.3493140 7.0788617 10.4992348 5.2068698 8.1828527 9.0563781 9.0507019 6.3615929 7.7077677 11.5130604 10.4345991 12.0730406 11.0224645 8.2668516 9.7304318 8.6638246 8.3858400 NA 1.8008688 8.0064265 9.0258438 11.8146188 5.5450386 11.6703170 11.8121046 9.9556955 6.2068698 2.6488796 7.9094017 8.5151230 7.9465548 5.3858382 11.7131679 NA 11.1407273 12.3533543 1.4789718 10.8559483 10.9031156 4.5233424 7.7029511 5.2603080 15.3458186 11.4711795 -0.5209764 8.9010141 NA 8.9728046 8.4647912 8.8734118 8.5769812 8.3086721 8.2405004 10.4468960 1.0639171 8.8583276 10.3086720 7.2927302 6.3118391 4.5233424 8.2271423 14.3823133 4.5008721 9.0200460 8.5504117 8.1119447 3.7268748 NA 6.3369296 6.5769816 9.5096165 NA 6.0181089 7.4331456 9.0469054 9.9394051 5.9218933 6.2068698 5.1228052 8.0296958 11.2342541 3.8008792 13.2197841 7.0335386 6.3737665 10.1182900 13.5247089 11.3543147 7.3918390 10.1671996 9.9485911 9.6538749 9.9738048 2.6488796 10.0899741 10.0015308 11.6798479 -0.5209764 10.0373700 7.9907019 -0.5209764 1.4789718 8.8925771 10.3102565 8.6004827 7.5013173 15.3878813 10.0402372 10.6835204 7.0103312 1.4789718 15.4799835 9.8872790 11.3392603 11.8471829 9.5123723 9.0258438 6.3737665 9.5733437 0.14355000 0.14355000 0.14355000 0.00000000 -0.23912000 0.01433000 0.19026000 0.73416000 -0.23178000 1.14200000 1.21090000 1.54430000 -0.00013862 0.01866300 -0.06477700 3.42190000 -0.24849000 0.23721000 0.23721000 -0.30721000 0.04287400 -0.06115200 0.32592000 -0.25733000 0.38899000 0.04443200 0.04443200 1.41650000 0.21876000 -0.02258300 0.14355000 0.15084000 0.00000000 -0.00596190 0.01964100 -0.24170000 0.03171800 0.73416000 -0.23812000 -0.25890000 -0.00124730 -0.16243000 -0.03612900 -0.17689000 -0.17689000 -0.17689000 -0.10513000 0.01866300 0.01866300 -0.06477700 -0.24849000 0.23721000 0.23721000 0.23721000 -0.30721000 0.04287400 -0.06115200 0.42150000 -0.11587000 -0.25733000 0.21389000 0.04443200 0.15218000 -0.06289800 -0.45158000 -0.30416000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.213 0.142 -0.028 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.142 1.142 -0.177 -0.177 0.000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.213 0.142 -0.028 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.142 1.142 -0.177 -0.177 0.000 10.1811219 12.5106505 6.3118391 9.3070858 4.5233424 10.6963011 4.0025135 NA 9.5637576 8.9342765 NA 6.6185000 2.4789459 9.8862171 9.2603089 4.8712670 7.5233432 7.8276774 10.5868202 12.6429134 8.8134907 5.9867431 9.9506244 2.6488796 9.7940989 10.4468960 5.7643515 NA 11.2199949 2.0639171 13.1950185 12.7912650 6.4214640 8.9218927 9.0239137 11.2899225 3.1793837 2.4789459 NA 9.2271420 10.3197272 11.4295052 6.8798283 3.4789459 8.4931373 10.1871710 10.9951418 6.3369296 10.1802557 -0.5209764 9.5206085 3.0639171 4.1228052 9.1982184 7.1678286 10.4985400 9.4647912 9.3228703 13.7608069 2.8008688 14.2780791 1.4789718 11.4476161 NA 7.1083059 2.8008688 7.5557648 8.7872881 14.080873 6.286305 8.915661 11.670317 9.671242 11.212812 11.713168 9.142507 8.805379 9.856160 12.093199 11.214505 6.576982 8.836501 2.478946 7.592692 8.818799 9.9445157 4.6488738 7.8669667 8.8883402 7.9192787 8.4141440 8.6835203 9.5517517 11.0224645 8.3431355 1.0639171 5.7268775 8.9955159 9.8331986 10.2000484 8.1389097 10.3446825 5.2863045 9.4461756 8.5769812 10.6804606 8.6056536 8.7573987 10.3039080 5.9708030 -0.5209764 9.0629533 5.9546826 10.9135775 9.9394051 4.7268748 10.6902292 8.0296958 7.6030707 14.3468554 10.8734120 9.6017773 10.9892189 11.2782309 9.2085699 6.0488051 TCGA-LL-A7T0 70 0 NA 98 breast stage iib t2a n1a m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 360.15.0 NA NA 1 3 NA NA 1 1 1 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.19137524 3.86741219 7.21242440 11.66098965 -1.08681377 8.53892494 1.72058492 8.56964109 10.98668838 9.34784456 9.94319361 7.09809105 8.83207954 10.04507323 7.31835752 8.60844446 10.11595230 9.58210114 5.94663964 5.40506996 11.87466593 9.64961815 14.00365951 10.24357293 8.36236468 10.17707228 7.20323542 9.44167042 -1.08681377 NA 7.10797341 11.55368713 12.43493935 7.21699703 13.73802585 13.24790852 9.10920357 4.77119892 1.49819980 6.21699607 8.60146662 8.72218046 6.99536580 12.53423785 3.82010746 9.58917323 12.65499921 5.18000460 9.69054560 10.94767134 8.61538908 2.91322453 -0.08681377 14.18666510 11.54211737 -1.08681377 10.00927242 0.49814873 4.82010746 9.56247236 9.79585930 8.91603111 8.76340294 10.04828415 9.60321425 1.91322453 10.50473856 10.51637895 7.85865990 6.72057124 7.63772978 11.36133253 14.43429520 7.99797148 10.09623128 10.97930543 7.92444377 -0.08681377 5.70763246 8.38082164 7.68470585 9.67559825 NA 5.00068061 7.81709814 10.14982840 10.16942498 4.61365541 5.38895064 4.82010746 7.85865990 12.18730314 5.69457658 12.21813790 6.49064554 7.01650412 10.64156192 12.92784700 12.08970109 8.29259450 11.17266527 11.02043331 10.48212244 10.06993144 2.61364952 10.06105710 10.57543950 10.92479291 NA 10.60583172 9.09809158 1.49819980 4.30621849 8.29475904 11.02369954 9.19861840 8.86158354 15.55814278 10.57098123 9.56157378 8.58564161 1.91322453 14.43291390 6.55707306 11.33370286 10.52331828 9.38793610 10.59401522 6.65468328 10.00337497 0.016286 0.000000 0.021183 -0.383920 -0.272120 1.283900 0.033690 0.348920 0.286610 2.738400 0.111690 0.948540 -0.324490 0.032704 -0.703250 3.501800 -0.708540 0.324470 0.334480 -0.708090 -0.334330 -0.326810 0.309530 0.309530 0.361490 -0.313790 -0.313790 -0.308390 0.365190 -0.692240 0.016286 -0.325420 -1.063400 2.530000 0.016565 -0.352250 -0.352250 0.348920 0.286610 0.324470 -0.343770 0.011400 -1.120300 -0.342120 -0.342120 -0.342120 -0.331100 0.032704 0.032704 -0.328780 -0.708540 0.097181 0.064501 0.055258 -0.708090 -0.334330 0.034818 -0.707210 -0.691330 0.309530 0.043865 -0.313790 -0.312760 0.042590 0.704200 -0.689790 -0.334 -0.334 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 -0.119 -0.334 -0.334 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 -0.119 8.81860327 13.16247786 5.00068061 9.71573262 3.86741219 11.90261072 2.72056304 -1.08681377 9.42990109 7.13238457 1.49819980 7.50193111 3.30553283 11.18497102 9.49253221 7.18000261 6.66810352 9.25751207 6.80803360 11.36648686 11.20751533 6.61365541 10.30392261 1.72058492 6.08314102 9.60321425 3.61366130 NA 11.22269258 4.12267272 12.21228112 11.63538339 6.76496578 10.13419912 10.36648691 10.02630723 3.49817426 2.82009725 -0.08681377 2.08314527 9.76730537 9.64538374 10.10365827 3.16114599 10.39887951 9.27625587 10.02500401 5.70763246 9.98132267 NA 9.35304711 2.37264570 3.82010746 10.24809289 5.05522169 7.06803444 9.42891600 8.11043267 9.34784456 -1.08681377 13.94521890 NA 10.62531333 NA 8.79279940 4.58564161 8.54439342 8.72699738 14.450004 7.047643 9.799675 13.738026 9.507541 10.725394 12.534238 11.470441 8.293309 9.581215 12.182927 11.999850 7.684706 8.421011 3.235145 7.867413 11.103658 10.9572688 5.7461058 8.8890643 9.7996749 9.4953582 10.5430009 7.3602993 9.5579739 10.2435729 7.9328071 3.0831453 9.2192779 8.1270740 9.7516323 10.0289101 7.6101840 10.2547350 8.6880034 6.9132162 8.9160311 10.7289998 11.7269974 9.0072939 10.4972392 7.5856416 0.4981487 9.0193080 6.2795382 7.3767410 10.1694250 5.2351450 11.3308051 7.8586599 7.3522995 13.5645483 9.7851216 9.1986184 11.6855308 11.4816474 9.2685673 1.2351143 TCGA-LL-A8F5 61 0 NA 189 breast stage iia t2 n0 (i-) mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 372.12.0 NA NA 4 1 NA NA 2 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 13.36708467 -0.93043530 4.62404239 11.71488514 NA 9.07085995 0.06942721 8.60278162 10.56530690 9.78712829 8.57922692 6.98234108 8.29586396 9.89202272 7.74893213 8.04959156 7.82433954 10.15757760 8.18319419 7.31737915 10.74055060 11.72117632 12.79492466 9.71691032 8.17273952 9.81176129 7.88643553 10.74761188 6.17797558 0.06942721 7.06945192 10.56630563 13.53763042 7.94903527 11.40985836 8.80754426 13.35398683 5.95209589 2.39138280 8.80077083 8.73833686 9.33974714 8.24936095 2.97634530 NA 11.42425223 11.79289951 7.35947110 10.19611115 10.23121362 8.09735797 6.33623875 4.39138280 15.71299710 12.53603823 -0.93043530 8.81764468 NA 8.05244524 7.60861041 9.10149749 8.36636812 8.33389463 8.20130892 10.35022263 1.87680177 9.76119533 10.22743039 8.05813680 7.27402306 4.19873773 6.06945084 14.80873147 6.73044568 9.02510190 9.25680405 9.64025633 1.65443554 1.65443554 7.10837077 8.55326757 11.43932180 NA 5.40930267 8.16484912 10.24873904 10.02727945 4.65441263 5.97634301 5.04673114 7.36407248 11.75944986 0.65443554 13.14200322 5.21919950 5.96426924 12.14509815 13.28179627 11.95304977 8.28619779 10.25122533 10.12337780 9.72319265 9.78884066 2.75540037 8.94135725 11.99834033 8.28862018 0.06942721 10.50147169 8.06380545 3.39138280 3.31737643 9.19486542 11.17044269 9.13284696 9.11657581 15.40837973 10.41152656 9.02219301 6.74187682 3.31737643 13.65857632 7.49571675 12.04296988 11.75748360 9.44666234 9.42700395 7.08067898 10.26887880 -0.3246000 0.6412200 -0.1771500 0.7267600 1.2438000 0.0000000 0.7177400 -0.2278400 -0.3893900 -0.3932000 1.1022000 1.1040000 1.0761000 -0.3653500 -0.3863700 -0.4590600 -0.8009400 0.2609100 -0.2836800 -0.1100000 -0.1877200 0.4123000 -0.4412300 -0.4412300 0.0616600 0.2370600 0.2370600 0.0526770 0.0582340 -0.4076000 -0.3766100 -0.3934000 -0.3907300 -0.4030600 -0.3846900 -0.3580500 -0.3580500 -0.2278400 -0.3893900 -0.5998200 1.8909000 0.3873400 -0.3915100 0.1554800 0.0509700 0.3408100 0.3364300 -0.3113100 -0.3649800 -0.4016600 -0.7900800 -0.5437000 -0.3912900 -0.0028998 -0.0960350 -0.4153000 -0.3945200 0.5175300 -0.4412300 0.7059000 -0.0125660 -0.5239900 0.1933100 -0.4162900 0.1469800 0.6113700 0.230 -0.311 -0.397 -0.397 0.000 0.000 0.000 0.333 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.391 0.314 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.230 -0.311 -0.397 -0.397 0.000 0.000 0.000 0.333 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.391 0.314 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 9.13284696 13.29337816 3.06944440 9.82015885 4.11384216 10.63312483 2.23936749 2.52887133 11.13486805 8.41152666 2.76989866 8.23435857 5.86386661 10.31619248 9.82183249 5.35485411 4.35485411 8.38912408 6.84423875 10.34499445 8.94148020 7.60861041 12.05333616 NA 8.85081161 10.35022263 -0.93043530 -0.93043530 10.59790599 2.87680177 12.75529569 13.08294904 6.98831545 10.33740894 10.79567004 10.51135863 5.66936415 4.39138280 NA 3.15691431 9.68232029 10.04959143 6.97634301 1.87680177 10.07020549 8.86549141 9.57128905 5.85081192 10.63312483 0.06942721 12.57860832 3.52888383 5.00018934 10.42187054 6.85696329 9.17405056 9.08626018 7.80416136 12.39868761 8.71330815 13.74948168 0.06942721 12.32389004 0.06942721 7.58908781 5.54518381 7.63169437 8.78884066 10.795670 9.036678 8.077881 11.409858 9.558296 10.730339 2.976345 8.221737 7.720504 10.030902 12.612967 11.803738 8.553268 7.780258 2.069462 7.382335 9.291039 10.025828 3.239383 8.035236 7.608610 8.239377 9.086344 6.850812 7.949035 9.716910 12.247806 3.239383 8.483080 9.047204 11.234673 10.000189 7.680477 9.827675 4.927432 10.004617 8.366368 10.134868 9.245625 10.303072 10.485194 7.435774 2.654413 9.661703 8.684806 10.660507 10.027279 8.660039 10.697897 7.364072 7.902342 13.829236 10.702901 9.420391 12.926364 10.826842 9.839290 4.797371 TCGA-LL-A9Q3 69 0 NA 224 breast stage iiic t3 n3a mx 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 28 white not hispanic or latino 379.6.0 NA NA 5 NA NA NA 1 2 3 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.9211914 4.3733559 5.4251941 11.8720354 -0.9842170 8.2228186 -0.9842170 8.4188165 10.6469815 12.1598253 8.9670890 6.7369038 9.0228316 9.4493899 7.4462571 8.6194306 9.9539137 9.0778505 5.7300503 4.0601944 10.2988928 11.6033476 9.1072398 9.1781957 8.1006129 10.2270844 6.6668560 9.0270315 NA 3.6596620 7.0926197 10.1863555 11.9459873 8.0158042 13.6557103 12.3748676 10.8888639 7.4294327 2.4752406 6.1243281 7.2301233 9.9309369 6.6157179 13.1869030 -0.9842170 10.2548061 13.7184641 3.3377396 9.8768914 9.9030250 8.2349731 7.9700006 NA 14.3451481 9.9937997 0.6007455 7.7806762 NA 1.6007455 8.7283314 8.8311878 8.5913436 8.3601004 8.6487998 9.7856423 6.9583184 10.3309540 10.0143949 8.1112014 8.1450874 12.6680892 10.8984474 14.9623224 5.4017533 11.7790168 9.4721587 7.5275568 1.3377111 3.1857239 5.3556541 6.8359834 9.5703933 NA 5.3556541 7.3645322 7.6157172 8.9656311 6.3377325 4.8737837 4.4420677 9.0353952 11.3692270 5.1655502 13.1694356 5.0601987 5.2252595 10.8239642 12.4282419 11.6795849 8.9844712 10.5847106 10.1450874 9.0642912 9.6415133 2.8231583 9.7462745 10.6226722 8.8799906 -0.9842170 10.5300253 8.2228186 3.1857239 2.6019579 8.4251953 9.7538966 9.0367844 8.1731514 15.4211121 10.3349120 8.9859102 6.4834095 3.4081276 15.3163179 10.0444012 10.6460715 11.6049874 7.3733568 9.3354766 6.0158053 10.7923032 -0.37008000 1.11390000 1.10720000 0.00917050 0.00069327 -0.01766600 0.38287000 -0.01395300 -0.01188700 2.72530000 3.65690000 0.76121000 -0.00318590 -0.00318590 0.00110930 -0.00456950 -0.00456950 -0.00443120 -0.00619160 -0.00595220 -0.00110870 0.78408000 3.65690000 -0.02205800 -0.03737100 0.61516000 0.61516000 0.60196000 -0.00719580 -0.40074000 -0.37008000 0.00000000 -0.74775000 -0.01766600 -0.01954700 0.38287000 0.38287000 -0.01395300 0.00123530 0.00069327 0.74271000 0.73549000 -0.78069000 0.00736090 0.00736090 0.00736090 -0.05145100 -0.00318590 0.01014600 -0.00373950 -0.00456950 -0.00443120 0.00041593 -0.00954260 -0.00922390 -0.00110870 -0.00415460 -0.00553750 -0.77761000 -0.02205800 -0.33871000 0.61516000 0.60196000 -0.00719580 0.00805670 -0.02630400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 8.2494240 13.4515398 4.5703961 9.7698568 2.7162447 11.3298211 4.0158008 NA 9.4955846 8.0326128 NA 6.9987980 -0.9842170 10.5066553 9.5598029 3.6007693 6.9583184 7.9959441 10.1668210 12.6424261 9.7649699 6.3195854 10.1269401 1.8231787 9.2301235 9.7856423 6.2542085 0.6007455 11.0578057 2.3377396 13.2422166 12.3563500 7.4124090 9.6560494 8.8737855 10.6049874 0.6007455 1.6007455 NA 4.8984454 9.5442586 11.1039301 9.5569011 2.4752406 9.7017270 9.6979211 10.0437105 4.0601944 9.7606383 NA 10.5235991 5.4587495 7.2872673 9.7597805 7.4715427 3.2637255 9.7839888 8.4793288 12.5562957 3.6007693 13.7197620 1.0157830 11.5564168 NA 7.3995087 5.5393667 7.2825909 10.2037750 11.035430 5.835982 8.519630 13.655710 9.993800 10.933176 13.186903 12.533228 8.639869 9.077850 12.880861 10.874951 6.835983 7.780676 2.716245 6.254209 8.674016 10.705366 4.145090 8.213021 9.000223 6.666856 9.744890 7.021429 10.591344 9.178196 7.554963 8.507657 5.103267 6.513975 9.674908 9.924197 7.919686 10.491031 6.674016 4.630516 8.591344 10.769857 10.117124 9.309276 10.312721 7.150231 9.597005 10.455801 5.507658 4.946544 8.965631 5.491539 10.744575 9.035395 6.730050 13.516522 11.019674 10.645161 12.093288 11.403553 9.183222 -0.984217 TCGA-LQ-A4E4 73 0 NA 849 breast stage iiia t3 n1a mx 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 3 white not hispanic or latino 271.28.0 NA NA 2 3 NA NA 1 2 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.39057e-06 5.840393e-07 10.294368600 7.757857330 7.336155718 12.291070352 0.996316429 8.934415361 NA 9.315978251 11.214566531 8.746175357 9.933679886 7.724226650 9.518887587 9.007533313 7.443389502 9.730168660 11.321330323 9.134577770 6.083768635 2.803661020 11.608944166 10.098937958 8.888089627 7.523783048 8.661642015 10.280551798 4.125584982 10.161841212 0.581303036 0.581303036 7.585020358 11.725926780 12.598076816 7.024212173 12.741244940 13.493409378 8.707112334 6.675786298 3.519868952 6.135857011 8.244233475 9.833934008 5.891122646 13.506452042 2.166233395 9.445454625 13.119053146 8.675786298 8.901572590 11.400915397 8.614691442 4.353859614 NA 13.990208102 10.231009682 1.803640357 7.569953556 NA 2.803661020 9.503109379 10.661197697 9.586893067 10.493159847 10.456249880 9.315978251 3.519868952 11.826425066 11.062395230 6.244234427 8.724226309 3.166233395 11.151124134 13.935196410 7.432934360 10.543200447 10.100904739 7.618357603 0.581303036 4.166233395 8.829195976 7.588763349 11.111024398 -0.003755892 4.581266877 7.435097653 8.888089627 10.671380955 5.504099149 3.166233395 4.040699591 9.460851687 12.077955877 4.040699591 13.701398382 5.281709376 7.588763349 10.817681450 11.602479846 12.904229432 8.351657036 10.489661140 9.760348208 10.158697408 10.730168745 4.724224603 9.739457444 11.449319375 10.741139899 NA 9.963532212 8.724226309 -1.003755892 5.423578171 9.144782625 10.814089174 10.178700327 9.341711170 14.339699965 10.818876837 9.673144565 9.485150459 1.996316429 14.821264764 9.512991061 12.958027015 11.686740592 10.651389447 9.522805323 8.575622062 10.392107873 -0.01654400 0.02352000 0.80338000 0.01679300 -0.01151800 -0.02018300 0.07407400 -0.00046137 -0.03265800 0.01396900 0.01396900 0.01396900 0.02787300 0.02787300 -0.82800000 -0.82800000 -0.82800000 0.01582000 0.01582000 -0.01289600 0.02253800 -0.05675600 0.10507000 -0.78718000 0.86705000 0.08676400 0.08676400 0.08676400 0.10887000 -0.78229000 0.02352000 0.01791700 0.01679300 -0.02018300 -0.02018300 -0.01804000 -0.01804000 0.05306000 -0.00046137 -0.01482400 0.00689780 0.00000000 0.01396900 0.04296900 0.04296900 0.04296900 0.04296900 0.02787300 -0.82646000 -0.81862000 -0.82800000 0.01582000 0.01582000 0.01582000 -0.85133000 0.02253800 -0.07618900 -0.75230000 -0.79914000 0.05162500 -0.83352000 0.08676400 0.08676400 0.07364200 0.02703000 -0.78617000 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.109 0.109 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.109 0.109 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 7.647357686 12.215020594 6.950502241 9.820469228 0.576473765 12.170451483 0.581303036 NA 9.260748564 5.724227332 -1.003755892 7.410399621 4.388623521 9.826821271 9.802855593 5.083770762 9.932207664 9.298944874 10.999472559 10.816883895 10.525165475 8.732708102 10.941018106 1.581254823 10.079785292 9.315978251 3.244232524 1.581254823 10.409405045 3.244232524 11.357153119 11.731650473 6.668731845 9.368082758 7.220307703 9.877420037 8.191062670 0.581303036 -1.003755892 4.751195896 9.183658206 8.841796104 10.457273750 5.803661020 9.680598810 8.234710632 9.552812015 4.083766508 9.622014836 -0.003755892 12.123494327 -1.003755892 5.950503408 9.647079534 6.587342486 NA 9.237097362 8.803661020 8.311455433 3.519868952 13.386474985 0.581303036 10.114598284 NA 8.217893254 4.244232524 7.607331054 8.494157963 10.790823 6.253694 8.550895 12.741245 10.382061 10.749941 13.506452 12.953408 8.156177 10.174348 12.021273 8.203320 7.588763 8.297802 1.996316 7.380010 10.860492 11.614921 7.205759 9.078455 8.787469 8.638358 11.032713 4.950501 8.418371 7.523783 9.263093 -1.003756 8.496152 8.515687 9.279394 10.461362 7.140965 8.015897 10.282864 3.083775 9.586893 10.568533 11.823649 9.505091 11.125911 7.888090 NA 9.904136 8.576678 0.581303 10.671381 5.062394 10.634289 9.460852 7.380010 13.753071 9.445455 9.533524 11.412312 11.149541 10.569006 0.581303 TCGA-MS-A51U 44 0 NA 85 breast stage iib t2 n1 m0 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 2 white not hispanic or latino 271.28.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.059253e-07 1.112456e-07 10.89087239 9.18527091 6.77539563 12.22291140 1.86848923 10.32030449 0.64607047 9.44052807 11.63147975 10.50823293 9.36150213 7.84905224 8.28515111 9.06537009 7.06114974 8.99336443 11.16181199 9.94608325 7.83593670 1.64611656 11.91328898 11.12992796 11.30670238 11.71220137 9.41980095 10.28394457 6.80934241 10.10825314 NA 3.52058568 8.26082217 12.51621996 12.17812386 7.94379243 13.49968164 12.28966775 9.73180590 6.98596258 4.19043313 7.82270083 8.58862657 10.00659355 8.73180607 12.88481545 5.34655274 10.95558852 13.94632171 6.53688283 10.19925506 10.01243431 7.68320167 9.59155601 -0.93898423 13.31244269 9.57191378 3.38308216 7.88769829 1.38305450 4.27060369 9.83840504 9.77968259 10.03986014 11.85901379 9.39765624 10.25097424 2.06115406 11.12858404 11.25375071 7.64986403 7.48741480 9.73974973 11.27819859 15.16965370 8.14462918 11.33115292 11.37318174 7.49577749 2.38308216 0.06115406 9.29237087 8.59642497 11.83531900 0.06115406 4.64611080 7.47477753 9.39206665 10.67309659 6.99188687 6.62339137 4.52057940 9.97104269 11.89027777 2.86850899 13.28944227 6.12723913 7.62720336 12.93122535 12.50874952 12.77496574 8.29955422 9.83758268 10.51596303 10.53609264 11.28273678 5.45346819 8.68136950 11.47054058 10.93920057 0.06115406 10.47371955 8.38533008 0.06115406 4.15242682 9.74414427 10.85759493 10.64470262 8.85881124 14.77746006 10.71130389 9.34307976 8.68685836 3.86850899 15.33776482 10.29117012 13.52377974 12.22479934 10.38814088 9.59545256 8.26816394 10.85177512 -0.00105170 0.42787000 0.44122000 0.00000000 0.00000000 0.00638710 0.20855000 -0.21354000 -0.21354000 -0.00110870 -0.00110870 -0.00110870 0.19269000 0.19269000 -0.00816240 -0.00816240 -0.00816240 -0.01298900 -0.01376600 0.58824000 0.13583000 -0.01876500 0.14669000 0.16505000 0.16505000 0.30489000 -0.21750000 0.52171000 0.35871000 -0.02178400 -0.00105170 0.00110930 0.00000000 -0.00709960 0.00638710 0.20855000 0.18889000 -0.21354000 -0.21354000 -0.21354000 -0.00124730 -0.02759400 -0.00729030 -0.34939000 -0.33063000 0.23659000 0.18449000 0.19269000 0.19071000 -0.00816240 -0.00816240 -0.01298900 -0.01376600 -0.01376600 -0.22170000 0.13583000 -0.02095500 -0.26444000 0.14669000 0.16505000 -0.00069303 0.25308000 0.52171000 -0.24946000 -0.01381500 -0.04400900 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.428 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.428 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 9.6262517 13.9371389 8.5788191 10.7706643 5.5040928 10.6850312 3.3090743 2.2310637 8.3830778 8.9829907 -0.9389842 8.1214133 4.8940417 9.8143665 10.3084839 3.0611541 9.7856635 9.5993386 10.6772390 10.3711943 9.7681119 8.6041814 10.9721671 2.6461166 9.2875619 10.2509742 6.9740394 -0.9389842 10.6610625 3.9680447 12.5357429 12.0739488 8.4165007 9.7467745 9.1231957 10.0247683 5.3279352 NA NA 1.6461166 9.8351131 9.6347969 9.7659179 5.6610626 8.7581173 7.7753950 10.5669612 6.3279370 9.7184681 NA 11.8701138 3.3090743 4.7615885 9.1056804 5.9448936 6.2706037 9.4905565 7.3090770 8.3488622 -0.9389842 13.5333963 2.9680354 10.3915064 1.0611541 9.0849040 5.4534682 7.6195707 9.7300346 12.990352 3.584710 8.481110 13.499682 11.012405 10.494735 12.884815 12.360644 8.532825 10.324419 12.804932 10.862050 8.596425 8.143299 NA 6.470540 12.044500 11.5770958 6.8620496 8.9034999 8.7493998 7.4577543 10.3169809 7.6721743 7.3511689 11.7122014 6.7050061 4.8425113 7.6977745 6.8224344 11.5575041 10.5133909 9.4470121 8.9144593 11.7528932 6.7753956 10.0398601 10.2754688 10.9907779 10.3378557 10.9125083 8.8971999 -0.9389842 9.8963712 7.3313980 7.7992421 10.6730966 7.3694883 11.2247239 9.9710427 7.2851516 14.0165725 10.3528960 10.7148905 12.8435337 11.3785623 9.9483703 2.6461166 TCGA-OK-A5Q2 59 0 NA 64 breast stage ii t2 n1a mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 2 NA NA 288.26.0 NA NA 2 NA NA NA 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.112456e-07 11.1366236 8.7965452 7.3469525 11.2904536 1.4128357 9.6181103 1.1904252 9.2699331 11.3246608 9.8033168 9.6796274 7.5450649 8.7526907 10.3607907 7.7603041 9.4881289 10.3536787 9.6809650 7.4320340 4.6054884 10.7703928 11.1755787 13.1467640 10.9978033 8.8534134 10.3599558 7.4727647 10.3974627 0.1904252 0.1904252 8.7386280 11.7525318 12.4422266 7.9319153 13.9479425 12.4616195 9.9881099 6.6823008 3.5123786 7.5302986 8.6209009 7.6250768 7.8270727 12.9199275 0.1904252 10.9602862 13.4437542 6.6929488 10.0352797 10.1251221 8.2330199 5.8722723 -0.3946005 13.3927967 10.3295691 2.0649173 8.8355063 -1.3944108 3.6929516 9.6395970 10.2362080 9.7392703 11.6411441 9.9115475 10.4216695 2.9274224 10.6678693 10.4556726 5.8343042 8.1368671 12.9070535 10.0847608 15.0023749 8.6859836 10.7891212 10.2770270 8.5640386 -0.3946005 7.4352085 9.3778005 8.2636974 11.2470861 -1.3944108 4.5123786 7.8628735 9.7198789 10.6271599 4.7953098 6.5421234 4.5827667 9.9739923 11.8603669 3.0649173 13.4576252 5.8051583 6.7552334 11.3154312 13.2299386 12.5337266 8.5799004 10.6522689 10.8103626 10.3257301 10.6972518 4.4634655 8.9364027 11.1814977 11.6600902 -1.3944108 10.4770062 8.7615689 1.9274035 3.7746079 9.5582271 10.9101224 9.8045447 8.6782885 14.8851690 10.0401141 8.9285406 8.0812192 4.5596815 15.2559346 10.2325638 12.9506139 12.7214236 10.1142710 10.2712659 7.7424772 10.9832088 -0.01312700 0.73986000 0.74651000 -0.00028789 -0.00193990 0.00223960 0.00097064 -0.00512270 -0.00512270 0.00332990 0.00332990 0.00750000 0.00027728 0.00027728 0.00652620 0.00652620 0.00652620 0.00166420 0.00166420 0.00041593 0.00624810 -0.00872370 0.01251600 0.01251600 0.01251600 -0.02137300 -0.02137300 -0.02884200 0.05167200 -0.17107000 -0.01312700 -0.00180140 -0.36102000 0.00223960 0.00305220 0.00097064 0.00097064 -0.00512270 -0.00512270 -0.00512270 0.00305900 -0.00013862 0.00332990 -0.00318590 -0.00318590 -0.00318590 -0.00318590 0.00027728 0.00027728 0.00652620 -0.37302000 0.00166420 0.00166420 0.00166420 0.00041593 -0.08612000 0.00000000 -0.36802000 0.01251600 0.01251600 0.00791750 -0.02137300 -0.02884200 0.00610900 -0.00373950 -0.00332430 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.8361069 12.3585981 6.8246546 10.2266220 5.7754114 11.7811913 6.9542138 -0.3946005 9.0638925 8.3917557 -0.3946005 7.6083007 5.5596815 10.1221708 9.7074615 4.5123786 9.8438906 9.3728426 11.8823372 10.0566969 9.7325580 6.9138253 12.3567161 2.1904568 8.3720149 10.4216695 7.5033312 NA 11.0695210 4.6715764 12.2250181 11.6401129 8.9464487 9.9035484 8.4320345 9.5243491 5.7450383 2.0649173 -1.3944108 0.9274414 9.2448267 9.9419925 9.8069973 5.9364024 10.0791155 7.9046936 10.4216695 5.8628729 9.5763107 -0.3946005 10.5647634 3.2493391 5.2779104 9.2574435 5.8458965 5.9453361 10.1378417 8.9816112 8.1904484 0.6054943 13.6195499 -0.3946005 10.3616252 0.1904252 7.8557842 6.2565371 7.6139147 8.5669354 12.975157 6.291987 8.446264 13.947943 10.299408 10.994041 12.919927 10.578107 9.142597 10.090309 13.031620 11.115508 8.263697 9.725075 2.605494 7.312845 10.925722 11.1736795 6.5123770 8.9375224 8.9296664 8.8051583 10.3653116 8.2439218 7.7577707 10.9978033 6.8769491 0.9274414 9.5523921 7.3728094 10.6450903 10.6969212 8.0913153 9.1349163 10.1814978 7.0893011 9.7392703 10.1909179 10.8103626 10.4140479 10.4192671 7.7166213 9.1885686 9.5980490 7.4881285 8.3553555 10.6271599 5.3197299 11.1075718 9.9739923 7.3736700 13.9891227 9.8937752 9.9240286 12.6432044 11.1204464 9.6823015 2.3059122 TCGA-OL-A5D6 71 1 1104 385 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 288.26.0 NA NA 2 NA NA NA 2 6 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 8.065304e-07 1.946798e-07 11.00948357 6.76370635 5.66514260 11.47431821 2.35772090 8.81714580 0.03576465 9.13776197 11.36474160 8.02162796 9.64311662 7.84635792 8.26219823 11.65875315 6.68683805 9.69131693 10.69934436 9.31539686 7.86867627 0.03576465 11.37173478 11.96800098 13.32724475 9.52161555 8.81386326 9.89609728 5.51151864 10.15148023 -0.96409462 2.49520907 8.14952816 11.03719440 12.32371354 7.44941446 14.06546169 12.05902076 10.92567037 7.27896047 4.65049460 7.10724847 8.20571116 6.14431155 8.00732951 12.17165579 NA 11.34951959 10.33212888 4.28371439 9.72485811 11.02624477 9.18171829 8.59420702 0.03576465 13.67429284 9.54556128 1.62072715 8.54753890 0.03576465 5.08018010 9.84314109 10.48286945 8.73449083 10.38506741 10.16635681 10.78188063 1.35772090 10.90151949 10.37730501 7.08563498 7.46623883 4.16506778 9.26219846 15.67259491 8.35392223 10.41786981 9.98342318 9.26580677 1.03576465 6.11260214 8.66878148 8.49726586 12.68256992 -0.96409462 8.12589851 7.65417200 8.40865115 10.77176527 5.60564248 6.55148679 4.89376506 10.00229170 11.36810257 NA 13.89089802 4.81714740 7.08018010 12.41177591 15.04062114 12.47119605 7.33499456 11.37285054 10.03013961 9.53113170 10.84635784 4.08018010 9.88284355 11.55443939 10.29376326 -0.96409462 10.41245426 8.79899856 -0.96409462 5.08061929 9.44835608 10.67014351 9.61792821 9.15990766 15.05902078 9.98707098 8.88909566 7.25010510 4.32118492 14.44159249 10.15731977 12.92548030 12.86986217 9.78565566 9.80810087 7.81714612 10.04357745 -0.00221680 -0.00221680 -0.00263220 0.00507000 0.00507000 -0.00581400 0.01433000 -0.55256000 -0.00249380 0.03642400 0.03642400 0.03642400 -0.02562000 -0.02562000 -0.35897000 0.01265500 0.01265500 0.00110930 0.00624810 0.07512800 -0.53256000 -0.00470790 -0.52123000 0.01978300 0.02202400 0.00319100 0.00319100 0.00030347 0.03284500 -0.00221680 -0.00221680 -0.01050800 0.00507000 -0.00581400 -0.00581400 -0.00387790 -0.00387790 -0.55256000 -0.54623000 -0.55317000 0.04854600 0.04911400 0.03642400 -0.53561000 -0.53561000 -0.53561000 0.01363200 -0.02562000 -0.02562000 -0.35897000 0.00458000 0.00110930 0.00624810 -0.00346270 0.07512800 0.01314300 0.00000000 -0.53226000 -0.52123000 -0.52379000 -0.53470000 0.00319100 0.00319100 0.01824300 0.00833510 0.03326700 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 8.8781365 13.8379491 6.4366649 9.7940095 3.6392669 11.9456793 2.8431397 -0.9640946 9.1390740 8.8953211 -0.9640946 7.8850350 6.9665239 10.4678060 9.7222867 1.3577209 8.3025727 8.9486756 9.8718366 11.5467976 10.4386650 7.1285429 11.8641211 1.3577209 6.7362260 10.7818806 8.3142356 NA 10.5956413 1.8431397 12.8483647 12.9324024 8.5175855 9.0733332 7.9576274 10.0022917 4.7637090 1.6207272 -0.9640946 4.5903745 9.1152710 10.5180900 9.5366282 3.8431397 10.6443645 9.0595405 9.6254374 6.3119099 9.6421914 -0.9640946 10.5519787 3.5593450 4.4281022 10.0771100 7.1388646 5.5115186 9.2268454 8.2057112 6.8039709 5.8431422 13.7087640 -0.9640946 10.6596677 NA 9.3037433 6.5749447 7.7431453 9.7965061 12.3467511 5.4620523 9.5226212 14.0654617 10.3315552 10.9591137 12.1716558 10.1624907 8.6523352 9.8277630 13.1443923 10.9680009 8.4972659 10.4499429 0.6207741 8.1855336 10.6343040 11.4696324 6.2837144 9.0102008 8.3349941 6.6796420 10.2732113 6.8431409 8.1624905 9.5216156 9.0044531 4.4620523 4.7906730 6.5377822 11.3369966 11.1492028 8.2549549 9.1430033 8.9928882 5.0801801 8.7344908 10.3503695 10.0944545 10.3850674 10.5622855 8.0910688 0.6207741 10.6172504 8.7342652 6.4536394 10.7717653 7.2206618 11.4722375 10.0022917 6.7431460 13.8929897 10.5391151 10.7526057 12.2044584 11.1478999 9.0747053 1.0357647 TCGA-OL-A5D7 70 0 NA 1416 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 288.26.0 NA NA 4 NA NA NA 2 5 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.056833e-06 3.337367e-07 12.04099939 3.88879195 5.91188089 11.07542981 NA 9.16941746 NA 7.44635301 11.53799454 10.94232815 9.60348504 9.03394795 8.49493277 10.72616996 9.63156760 8.94022461 8.36086464 9.85271785 8.08941817 5.80496477 11.57800532 12.82020109 12.08085046 9.94862056 9.95280021 10.11388708 8.56941096 9.82105867 -1.06552124 2.25652763 7.35666500 8.78322287 11.82220147 4.06388255 10.98104198 11.16101224 10.38323264 7.72901567 5.53451300 8.41841598 8.51956235 8.86829074 5.02206149 5.70278496 -1.06552124 11.41841583 10.01275079 7.40220542 10.54035271 11.00371410 5.78008958 5.25652763 3.68948927 15.47915218 12.95088601 -0.06537028 9.69282330 -1.06552124 5.10452537 8.59993590 7.82029642 8.82029642 8.40424195 8.33547924 10.11450914 9.41639939 9.85867015 10.58025847 5.06388255 6.15376886 2.10453795 9.53172143 14.51774157 8.07312774 10.28332813 9.70443783 11.32745407 0.93462972 6.27444991 9.18844741 8.36086464 8.51956235 NA 2.63503461 8.98716821 10.70815136 9.95280021 4.29214859 6.42645263 8.70112900 8.60702547 12.30923202 4.66251885 13.34332780 4.22000485 7.11450862 10.61847186 11.88260217 12.30023898 5.48918967 10.66973289 10.13243097 9.51391586 11.47254636 3.93460142 8.82334335 11.02438153 5.22000098 NA 10.43045506 10.19375474 1.25652763 2.43028527 8.95973944 12.41753399 9.39607941 8.77537785 14.98276757 11.84748935 9.82638371 6.95140829 -1.06552124 11.33521269 3.88879195 11.06645695 11.58160866 10.10702754 9.71349856 6.90038382 11.00682978 -0.3516800 1.0371000 0.3685400 0.1626500 0.0504480 -0.0478010 -0.2072200 0.0908650 0.0545180 -0.4763800 0.6408500 3.0347000 2.2951000 0.0518140 0.0097276 0.4510500 0.2981900 0.2915100 -0.1917400 -0.3871600 -0.3729000 -0.4216700 -0.2609500 -0.2609500 -0.2173800 0.0567980 3.6569000 -0.4364800 0.0112610 0.0660860 -0.3516800 -0.6429300 0.2062600 -0.4927700 -0.6119100 -0.2072200 -0.5864700 0.0708170 0.0545180 0.5962000 0.1252000 0.1722600 -0.4763800 0.3183500 0.5517700 0.0452820 0.0167050 0.0518140 0.0318590 0.0097276 0.2236000 -0.5838200 -0.2354500 2.4713000 -0.3871600 -0.4133300 -0.3961900 -0.1945000 -0.2609500 -0.2173800 -0.0908760 -0.4381000 -0.4364800 -0.0878440 -0.0265770 -0.4191500 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 9.33227470 12.39825210 -1.06552124 10.15376848 3.03557113 11.55893857 5.64884505 NA 10.22577067 6.01141513 NA 6.59281131 3.18253340 11.37780262 10.49970211 4.93460142 7.79568709 8.92328469 7.72576297 10.68405051 9.05953564 5.63504041 10.62153818 1.33788232 10.80727490 10.11450914 3.18253340 NA 11.36896762 2.25652763 12.77616437 12.91839527 5.39403046 8.05613370 10.55022963 10.51627138 2.74196308 2.10453795 -0.06537028 -0.06537028 9.87784745 10.10452498 4.76749061 2.10453795 8.16630119 8.95557988 10.56941106 0.51954190 10.14039332 1.51954190 12.45999849 3.39403390 3.32691120 10.20473179 8.89810312 7.44239450 8.93319049 8.07925809 9.59815805 2.63503461 13.85908781 1.25652763 11.19816268 NA 10.28884935 2.10453795 7.53451300 6.30092175 10.867143 12.856069 8.194343 10.981042 9.594596 11.391981 5.702785 10.003378 9.461099 10.131817 12.702474 14.194601 8.360865 8.019408 6.283327 7.798786 10.299282 11.9204420 4.7674906 7.8917023 11.1727061 8.7011290 10.8027743 8.6017117 6.2921523 9.9486206 12.5740538 0.9346297 6.8653374 10.3443144 10.5451635 11.8936964 8.0792581 10.9700865 5.5195639 7.7956871 8.8202964 10.7591611 11.5822833 12.0501314 11.1268929 7.4853471 NA 9.4796030 6.2474832 8.8429927 9.9528002 2.9345920 12.3940611 8.6070255 7.2383809 14.0746309 11.3033793 9.8041938 12.9622469 12.3204624 9.4123583 3.5195671 TCGA-OL-A5D8 40 0 NA 973 breast stage iib t3 n0 mx 2-10-2014 female 2009 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 288.26.0 NA NA 2 NA NA NA 1 1 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.562279e-07 1.39057e-07 10.7929476 5.6088299 7.5934643 11.7680160 0.3111543 9.7332130 NA 9.0548607 12.4394649 9.2160338 10.0554215 7.4877372 9.1131259 9.7996579 6.9011119 8.3408956 11.0514912 9.8457754 5.9929723 1.5335633 11.8431794 10.5849438 12.8400093 7.6686999 8.1291980 10.3228414 6.3986103 10.1233148 -1.2736919 3.1185092 6.6390744 10.4524039 12.9367049 6.4335454 13.0913462 13.4950420 8.3167730 8.0638076 4.8759324 5.9929723 7.5303166 10.1147413 6.3036146 13.0539489 5.6210027 8.9823944 15.3912718 0.7262209 9.6768000 11.5988606 8.0571026 4.8136478 -0.2738663 13.8748236 9.3700420 -0.2738663 7.7205391 NA 3.5335384 9.3509812 9.7339139 6.2418859 12.5095933 9.9209426 9.9958969 2.4266136 11.0930544 10.9820995 8.9598055 7.3986112 2.9741071 12.7045387 14.6617192 9.9308730 9.1628973 10.8235595 8.1398138 0.3111543 6.9209423 10.5079552 8.2536627 9.5270856 -1.2736919 5.8030022 7.8056704 9.2798151 10.1001384 14.0061953 5.0837367 4.0115851 10.0848369 12.1384910 5.1691273 13.4915237 7.1270647 7.6745532 11.7409037 14.6478175 13.3147833 8.7247761 10.7909286 10.8951712 10.1766495 11.0815368 4.6088270 9.4498467 13.0042722 8.7290007 -0.2738663 10.7244236 8.8631768 1.0480967 4.3569959 9.7395084 10.1275986 10.0610177 8.9729264 14.5380621 9.6368285 9.6970106 8.2039440 -1.2736919 15.6794273 9.7664754 12.5109228 10.1429833 10.4100576 10.3026701 7.8860568 10.2544494 2.55860000 3.65690000 -0.00622860 -0.00083160 -0.00595220 -0.02096100 -0.00027724 -0.01312700 -0.01312700 0.71660000 0.71660000 1.44590000 0.01181800 0.01223700 -0.00387790 -0.00387790 -0.00387790 0.01516800 -0.00083160 0.01293400 -0.01243800 -0.00013862 -0.74629000 0.00569190 -0.00908050 0.01251600 0.01251600 0.01251600 -0.00498440 0.00763920 -0.00401620 -0.75193000 -0.00595220 -0.02096100 -0.02096100 -0.00027724 -0.00027724 -0.01312700 -0.01312700 -0.01312700 0.00000000 0.00000000 0.72489000 0.00013863 0.00013863 0.00249690 0.00249690 0.01223700 0.01223700 -0.00387790 -0.76372000 0.01516800 0.00763920 0.00763920 0.01293400 -0.01243800 -0.00013862 -0.77960000 -0.74629000 0.00569190 0.01181800 0.01251600 0.01251600 0.00402430 0.00597000 0.01335300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 8.2865185 12.5097979 7.6027026 9.8803710 3.8554715 11.3406656 3.1185092 NA 8.7077529 7.6390751 NA 6.6977293 2.3111543 10.6639274 9.5677500 4.4266271 6.5779348 8.5559085 12.1269318 10.8412294 9.5351177 7.2653450 10.6266752 2.1856129 7.7976479 9.9958969 3.6330708 NA 11.2079852 2.4266136 11.3614504 12.0573826 6.9356389 9.7969776 9.9657843 9.5189761 5.1691273 3.6330708 1.5335633 5.5590757 9.4735396 9.8860572 8.7909284 2.5335384 10.0851116 7.7949642 9.6708979 6.0571036 9.0208066 NA 11.2059660 2.9741071 4.0481141 9.7514708 6.9618166 4.3408969 9.7902548 6.3555431 6.2807745 0.3111543 13.3224338 0.7262209 10.7644189 NA 6.3482377 5.9645904 8.0299663 8.6435579 12.7677628 4.8759324 8.6598764 13.0913462 9.8490138 9.8340567 13.0539489 12.7994905 9.2178986 10.0804352 15.1835025 8.8644576 8.2536627 8.7304063 0.7262209 7.0345250 10.5515421 11.700421 6.940505 8.474378 10.374993 8.043598 10.957719 6.974113 9.324238 7.668700 6.645049 1.896117 11.443648 6.870895 9.328885 10.447285 9.837321 9.738810 11.214779 5.083737 6.241886 10.482742 11.296753 9.744386 10.554322 8.193791 NA 8.940760 6.193791 5.135576 10.100138 5.481073 12.327765 10.084837 6.621004 13.159967 10.360089 9.393297 12.860853 11.919711 9.956807 1.726177 TCGA-OL-A5DA 61 0 NA 1783 breast stage iia t2 n0 mx 2-10-2014 female 2009 NA yes infiltrating lobular carcinoma yes NA white not hispanic or latino 288.26.0 NA NA 2 NA NA NA 1 3 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.084644e-06 3.893595e-07 10.5940569 4.5395497 8.5823814 11.7712850 NA 9.7724843 NA 8.9145890 11.9743266 8.8381031 10.0518666 6.9416475 9.1998002 9.4019655 7.2944370 8.6776383 10.6450839 9.4256815 6.4870827 -0.2677742 11.7837434 11.1439703 9.7051743 11.4171623 8.4870819 10.4639378 6.5395497 10.5375354 -1.2677742 4.4601135 6.6450834 11.2946755 13.2201602 6.8459366 13.3625186 13.2629666 8.8367933 8.3615513 4.8614790 6.2320410 8.6300399 8.8289098 7.5713985 13.4008026 1.9021122 9.7490029 14.5316533 4.9801213 9.4952574 11.0433752 8.5217280 4.7545615 0.3171883 14.3563217 9.5192401 1.3171304 8.3209093 NA 2.4326388 9.5515754 10.2094469 9.1864939 12.2362687 9.6725081 10.2503559 4.6148394 10.7854417 10.5443719 7.8793995 6.5459761 12.5395495 12.2715957 14.8745809 6.7309537 10.0164403 10.9881083 8.3597285 1.9021122 3.9021218 8.8537281 8.2459220 10.7215891 NA 5.3904063 7.3020503 9.7854417 10.5257979 4.4601135 5.2713547 3.2557575 9.5061580 12.1019282 2.9021122 13.9926364 6.3904063 7.4010792 12.1328072 11.8947432 12.5646890 8.7251327 10.8762154 10.9340122 10.6893728 10.6266334 3.5395435 9.0001516 12.4752407 13.2284242 -1.2677742 10.4421399 9.0302572 0.7322258 5.2004533 9.3441414 10.0524310 10.0513021 8.7601005 15.0125122 10.1261212 9.7955897 9.1287994 4.3171593 16.4086338 9.0974233 12.7237164 13.1710514 10.5229503 10.4107947 7.9537815 10.8587087 0.0151560 0.7374100 0.7620100 -0.0063781 -0.0197770 -0.0128160 0.0563590 2.3560000 3.6569000 0.6218600 0.6218600 0.6373600 0.0136210 0.0171130 0.0199110 1.4926000 -0.1392400 -0.0011201 -0.0011201 -0.1427200 0.0026243 0.0310020 -0.7208400 0.0196310 0.0196310 0.0235550 0.0235550 0.0235550 0.0445620 0.0151560 0.0151560 -0.0029204 -0.0063781 0.0633550 -0.0128160 -0.0098298 -0.0098298 -0.1360100 0.4100100 -0.1679100 0.0000000 0.0399120 0.6218600 0.0066539 0.0066539 0.0066539 0.0403150 0.0171130 0.0171130 0.0199110 -1.2929000 -0.0011201 -0.0011201 -0.0011201 -0.1427200 0.0026243 0.0310020 -0.7141800 -0.7208400 0.0196310 0.0193930 0.0235550 0.0235550 0.0445620 0.0050697 0.0523710 0.000 0.000 0.000 -0.664 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 -0.297 0.000 0.000 0.000 -0.664 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 -0.297 8.5233573 13.1680601 8.7697417 10.1368039 2.5395559 11.8975727 0.7322258 -0.2677742 8.8832112 9.3606402 -0.2677742 7.2596717 2.3171593 9.9440829 9.6353233 2.3171593 6.9121037 9.0875456 11.7372927 10.7772716 9.5086523 7.5168291 10.3701779 1.9021122 8.4719751 10.2503559 1.9021122 -0.2677742 11.1418507 3.8196580 12.1471440 11.8898573 7.4116745 10.7420231 7.6717739 9.5909526 5.3615508 2.0541191 -0.2677742 8.2180241 9.3171571 9.3715353 10.1094051 3.5395435 8.8984581 6.7434221 9.8256122 4.5135539 9.3679127 -1.2677742 10.3988624 1.3171304 5.0897481 9.9168840 6.0355183 2.1916258 8.5917295 6.6688325 7.3505803 0.3171883 13.7238936 -1.2677742 10.2074213 -0.2677742 7.6025593 5.1584582 8.0473443 7.7955897 13.998403 5.346904 8.456708 13.362519 10.117442 10.168906 13.400803 12.311275 8.958607 10.184951 13.140524 10.601017 8.245922 12.053700 -1.267774 7.574545 11.110489 11.577293 7.120212 8.977747 9.858254 7.790186 10.762258 6.493747 5.577686 11.417162 8.429162 4.404617 8.811679 6.165321 10.447728 9.972390 7.984860 9.385039 9.725841 4.686388 9.186494 10.558346 10.655522 9.436963 10.367913 7.243947 NA 9.010191 6.271353 4.861479 10.525798 6.008319 11.517443 9.506158 6.460115 14.138267 10.087546 9.728668 12.638897 11.988993 9.901493 NA TCGA-OL-A5RU 63 0 NA 841 breast stage iia t1c n1 mx 2-10-2014 female 2010 NA yes infiltrating ductal carcinoma yes 1 black or african american NA 296.27.0 NA NA 2 5 NA NA 3 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 8.343418e-08 11.88636156 9.16402722 7.01298985 11.81066184 1.59636272 9.72783232 NA 9.02739267 11.66991050 10.60996453 9.70710560 7.88964997 8.36074044 9.12660975 7.61871071 9.52623513 11.53171826 9.84087641 7.52030673 3.78898842 11.66531291 11.24482874 14.18559258 10.92757961 9.25557414 10.70112865 7.21944057 10.03037512 -1.21089678 3.03690769 8.50151478 11.15284875 12.71036387 6.74318372 13.72989782 12.67725540 9.77411826 6.42561204 4.51691025 6.35123078 8.12660949 8.60916692 7.24431531 12.88660848 0.08174865 11.29181959 13.12032466 5.83338095 10.00952941 10.74645268 8.60437124 9.25046731 -1.21089678 15.05984794 11.99186923 1.37395439 8.42198317 NA 5.55717111 9.91181575 9.23089444 9.84494800 10.96047739 9.51520604 10.30123450 2.48944018 10.70785105 10.66971926 6.71972558 8.25862963 1.37395439 11.65819604 14.86222981 8.28358337 10.88701989 10.22673983 8.04401646 2.11093112 5.44719897 8.50151478 7.95137914 10.83201512 NA 4.62187605 7.59634259 9.23916816 10.24739447 5.26472032 6.75477262 4.37394744 9.60597151 11.74790298 3.48942733 13.38570171 6.20684050 7.54387553 11.62760087 11.07698871 12.84257435 8.05811460 10.19040066 10.20472959 10.27193685 10.43554651 4.64696905 8.79881652 11.44384754 12.00163616 1.95891690 10.29579120 8.53550207 -0.21106377 3.81179981 9.16511326 10.42470589 9.84019680 8.39816650 15.19446171 10.66396915 8.85776613 8.93364610 4.69587692 16.37463991 10.22413713 13.65930436 12.65684568 10.14763907 9.61950307 7.78616702 11.45027156 -0.00263220 0.90890000 0.90994000 -0.00027724 -0.00027724 0.00055459 0.00000000 0.00360760 -0.03526800 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00304750 0.01684500 -0.00180140 -0.04292400 0.00722170 -0.00805450 -0.00968060 -0.00968060 -0.00968060 -0.01766600 -0.01766600 -0.01766600 -0.00636680 -0.00263220 -0.00263220 0.00555290 -0.00027724 0.00055459 0.00166420 0.00000000 0.00000000 0.00360760 -0.03526800 -0.05023500 0.00124810 0.00124810 0.01098200 -0.00774950 -0.00774950 0.00110930 -0.01271300 0.00000000 0.00000000 -0.00932230 -0.00304750 -0.42462000 -0.00180140 -0.00180140 -0.04292400 0.00722170 0.00374650 0.00041593 -0.00622860 -0.00968060 -0.00329400 -0.01766600 -0.01766600 -0.01262900 0.00402430 0.00685780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1410313 12.0155505 6.4183451 9.5211552 6.3588428 11.1055522 7.3320195 1.7889780 8.9195585 6.5032326 -1.2108968 6.8057955 3.1109144 10.0516700 9.9137553 1.3739544 9.3387725 8.8577661 10.9380998 11.1718820 10.2000433 7.4219832 10.5797436 0.7890197 10.3262062 10.3012345 6.4183451 -1.2108968 10.8089260 3.4894273 12.4435120 12.4577620 7.6716309 10.0273925 7.9105216 9.4605288 3.1109144 0.7890197 -1.2108968 5.0743898 9.6043711 10.2422584 10.1882658 5.3739509 9.2643767 7.5703476 10.4337453 5.5571711 9.7641192 -1.2108968 12.9589911 3.4328392 4.3125490 9.1882872 6.7289191 8.0392865 9.3426172 8.3435766 10.2863407 1.7889780 13.5494479 0.3739544 10.9516939 0.3739544 8.2110526 5.5703476 7.4578725 9.5472109 11.9908667 4.8975115 8.7547719 13.7298978 10.3344350 11.3051803 12.8866085 11.4064552 9.1152825 10.3007405 13.3833707 10.9579733 7.9513791 8.8030084 0.7890197 7.0651123 11.5200946 11.174850 7.128838 8.936193 8.845626 7.400013 10.025708 8.746090 9.117663 10.927580 7.189867 4.146541 4.110914 6.931810 9.805796 10.940956 7.308624 9.034540 10.990499 8.266746 9.844948 10.407373 10.685699 9.568707 10.339735 8.473737 -1.210897 10.016327 8.036915 9.543040 10.247394 5.373951 11.554545 9.605972 7.177005 13.557015 10.379575 10.782280 12.437907 10.580965 9.545544 1.788978 TCGA-OL-A5RV 43 0 NA 1062 breast stage iiic t2 n3 mx 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 20 black or african american NA 296.27.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.781139e-07 5.562279e-08 10.8850521 7.2145348 7.5685247 11.7438999 1.3237736 10.2996121 0.3237736 9.1869180 11.9213512 11.8880725 10.1412809 8.1838165 8.3237641 10.2977006 7.8473261 8.9347889 11.4590459 10.1214258 7.6456923 2.6457017 12.1680777 10.8450374 13.2488241 11.7265986 9.0253594 10.4861555 4.3535138 10.5831151 NA 1.3237736 7.4005798 13.5362099 12.7226860 6.7940844 13.8198690 13.2064072 9.4147588 7.6576650 5.9772066 6.7831960 8.5413181 9.1018412 8.0875297 12.7438121 4.6695371 10.1428789 12.9964105 7.0425820 9.6282676 10.5140004 7.9112290 6.7103450 -0.2611889 13.6007939 8.5525830 2.8262739 9.5921113 -1.2611889 4.0242044 10.2711576 10.4819531 10.0522516 11.7777207 10.3039038 10.3626831 2.5461660 11.5728776 10.8722650 7.4461611 7.8473261 8.6456923 11.6652830 15.1153680 9.2832252 11.2326572 11.0542343 7.4322888 2.4392508 6.5905511 9.5429328 8.6591546 12.0767023 NA 4.0607305 8.3200022 8.5461567 10.6068526 12.2767481 5.1481939 3.2623580 9.9985450 11.9398535 3.2623580 13.4064677 7.1817456 8.1920723 13.9108775 13.3229421 12.8753123 8.2604021 10.5376784 10.6434363 10.3994216 11.2448613 5.3387132 9.2216096 11.8287487 12.0695786 0.3237736 10.5053306 8.4461607 2.3237736 4.6969508 9.4573345 10.8437280 10.0864230 8.8809086 15.1733159 10.4658712 9.1018412 9.3377847 3.6456901 15.7821708 10.4836355 13.8273415 13.1839459 10.5433361 9.9634064 8.1481928 10.7661099 -0.0129890 0.7561300 0.7629300 -0.0103700 -0.0132640 -0.0117530 0.0074600 -0.0102320 -0.0306280 -0.0111700 -0.0111700 -0.0285290 0.0196430 0.0196430 0.0041632 0.0041632 0.0041632 0.1556200 0.1556200 -0.0135400 -0.0066432 0.1754300 -0.0522340 -0.0522340 -0.0041546 -0.0069981 -0.0069981 0.0659420 0.0216030 -0.0129890 -0.0129890 0.0000000 -0.0103700 -0.0099565 -0.0117530 0.0016642 0.0202030 -0.0102320 -0.0306280 -0.0306280 0.1631000 0.1712100 -0.0036011 -0.0089906 -0.0089906 -0.0089906 -0.0089906 0.0196430 0.0196430 0.0041632 0.0041632 0.1556200 0.1556200 0.1556200 -0.0135400 -0.0093932 0.1754300 -0.3569200 -0.0522340 -0.0522340 -0.0023553 -0.0477500 0.0659420 0.0216030 0.0052749 -0.1933700 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.409 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.159 0.159 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.409 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.159 0.159 0.000 0.000 0.000 0.000 0.000 8.4340302 12.5094656 8.3275163 10.0618565 3.6841230 11.2655454 4.4936922 NA 8.9807848 7.5069859 NA 7.3831625 3.7831947 9.8229457 9.9211960 1.7388111 8.5397017 9.7210823 11.8864836 11.0767023 10.0109415 7.6900867 10.7642873 3.0607219 9.8189529 10.3626831 9.3727051 -0.2611889 10.3261105 3.4936858 12.3311419 11.8523811 7.3086576 9.7117816 7.3010443 9.3871592 5.4936890 2.0607392 1.3237736 3.9087265 9.0288205 9.5413181 9.6878988 3.2623580 10.7233305 7.6091662 10.2120001 6.7217951 9.4383742 0.3237736 10.8186198 3.7388003 5.3237628 9.7889292 7.0231400 6.1051249 8.6798492 6.3237646 8.4165214 -0.2611889 13.6074796 NA 10.3209437 -1.2611889 8.6290659 5.1138422 7.7886505 8.3405725 12.640802 5.096355 8.558980 13.819869 10.288885 10.697717 12.743812 12.302713 9.147131 10.729260 13.659155 11.653000 8.659155 7.839464 NA 6.953121 11.523028 11.359709 7.407687 9.138614 9.272131 7.916221 10.746018 6.500353 8.965214 11.726599 6.526704 3.645690 8.347981 6.948937 11.816786 10.282800 8.283766 9.039154 11.672861 5.596783 10.052252 10.036864 11.386485 10.142879 10.621445 9.041441 2.198243 9.976328 7.190013 7.173430 10.606853 5.621445 11.129479 9.998545 7.513589 13.708460 9.774288 10.122506 12.996484 11.416521 9.847326 1.323774 TCGA-OL-A5RW 40 0 NA 1106 breast stage iia t1c n1 mx 2-10-2014 female 2010 NA yes infiltrating ductal carcinoma yes 1 black or african american NA 296.27.0 NA NA 4 1 NA NA 2 5 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 3.19831e-06 8.065304e-07 11.420134712 3.465935296 5.576361897 11.495100112 -0.993378820 8.889149825 NA 8.426466886 10.801734707 12.300553105 8.753021145 8.950486786 7.800922543 10.976612666 6.301126671 8.415897647 9.951218845 9.848857164 7.639502064 3.761391663 11.109138648 12.235175187 10.450486285 11.206792406 8.845710516 9.455655386 5.050902149 10.884940896 7.490322226 0.006477564 6.678932475 9.116337463 13.358826129 9.739522083 12.183459034 10.900187480 11.611059988 6.568749625 3.706950426 7.870692680 7.215960042 9.563012801 7.572560781 2.176418524 NA 11.870886408 8.687745190 9.338543416 10.330591675 10.867981458 6.215960042 7.056354838 2.176418524 15.850287763 10.284956279 3.254427755 9.501362311 NA 3.761391663 8.821890031 9.549538648 8.240126347 9.201263584 7.510332185 9.421191945 7.424359475 5.774692194 10.857474953 5.115033243 7.591469238 -0.993378820 6.398824053 13.483506061 5.613098426 8.405250406 8.742908624 8.409518651 5.235324979 2.176418524 8.850427840 8.973732949 10.670064888 NA 3.913396884 7.664718198 10.917149541 10.021921896 5.761394323 5.176430492 5.115033243 7.526143167 11.992882163 3.006513469 12.885228298 6.104537952 6.407386744 11.174865527 13.528720477 11.591469285 8.375013358 10.706079208 11.763271551 9.577311179 10.115031292 1.591487938 8.341897266 12.016160461 10.090650749 5.028874101 9.926115091 8.413774730 6.919396101 5.415897225 8.593346674 8.220825699 8.486287196 8.364058906 15.812338802 10.736976950 8.120248766 6.291909244 1.813853004 11.008970231 9.999445076 13.419936378 10.739098248 9.021921896 10.035794065 6.606420019 10.612560303 0.312570 1.206900 0.670670 -0.568030 2.487500 -0.748980 0.266080 1.046000 0.202440 -0.464720 0.017544 2.436700 1.172900 -0.713640 0.209620 0.340960 -0.679940 0.301740 0.199990 -0.611240 0.268910 2.495600 -0.709080 0.011121 -0.148110 1.147000 1.285900 0.020343 -0.123950 0.338200 -0.723050 0.036512 -0.629410 0.262630 -0.769370 -0.105260 -0.023977 0.543300 0.202440 0.143700 0.545240 -1.292900 -0.644270 1.185700 1.252400 -0.594110 -0.491400 -0.713640 -0.729410 0.078870 -0.675180 0.268600 -0.662720 0.366900 -0.649640 0.179080 0.152780 -0.722190 -0.709080 -0.112210 -1.006600 -0.763900 0.044857 -0.755180 0.377590 -0.769030 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.131 -0.131 0.178 0.000 0.445 0.445 -0.512 -0.512 1.201 0.730 -0.184 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.131 -0.131 0.178 0.000 0.445 0.445 -0.512 -0.512 1.201 0.730 -0.184 7.522206441 14.244239579 5.561096974 8.671842842 0.591487938 10.420134660 1.591487938 6.415897225 11.293064533 11.502861284 4.254435314 7.514301402 5.561096974 10.676277635 9.859816310 7.319389424 4.734427827 8.109794619 6.983787124 10.614299427 9.216581454 6.206178242 10.517765237 1.006477564 8.713865902 9.421191945 3.960706305 NA 9.711274975 2.913396884 12.569345426 13.120818484 6.125448601 9.944616171 11.518753413 10.495351095 4.006504493 0.006477564 1.328434383 6.720751806 9.499361387 11.186104890 8.777996284 9.161324901 10.353707360 8.962156543 10.589589543 4.006504493 9.932061171 NA 12.186726760 1.591487938 3.465935296 10.768490121 7.245389176 3.006513469 8.484265038 6.235324979 6.813861980 11.520974302 13.426269499 -0.993378820 11.130304843 7.845710829 5.693007373 2.465948352 7.907373818 7.998028473 12.273245 9.980204 6.919396 12.183459 9.912646 11.635408 2.176419 10.389671 8.382828 10.008619 13.730648 13.306502 8.973733 8.153712 5.449449 8.101904 8.970848 9.773863670 3.465935296 8.203723373 9.429622659 3.093965750 8.373375462 6.050899973 6.537887749 11.206792406 12.464015925 4.889152259 9.826685759 8.436687393 9.430673121 9.359653597 8.985217203 11.069901839 2.913396884 4.561093918 8.240126347 11.507597544 10.996965319 10.420663452 9.869144078 5.650362478 0.006477564 9.266073448 6.876871745 4.983787124 10.021921896 5.851996339 10.974093318 7.526143167 8.067202543 13.640864084 11.512070259 10.715590633 11.769304047 10.724183240 8.547603289 0.591487938 TCGA-OL-A5RX 51 0 NA 513 breast stage ia t1c n0 mx 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes NA black or african american NA 296.27.0 NA NA 2 4 NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 7 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.284165e-07 1.668684e-07 10.5747918 8.1752092 7.2903682 11.3275741 0.3131297 10.3322161 -1.2719489 8.7295344 11.6159180 12.1258008 9.4594451 7.8261582 8.4146269 9.2526678 8.1247308 9.0204478 10.6477344 9.2467793 7.4040831 3.4830160 11.5103054 11.7080872 12.6742100 11.0886989 9.5004408 10.2682543 5.7168099 10.5192768 0.3131297 5.7168099 7.7196482 13.1523581 12.7245996 7.5483048 13.6126783 12.9410784 9.7711535 6.9030515 3.6350114 6.9902209 8.4163766 10.2164684 8.2199792 12.3265277 3.8574138 10.6004163 13.7916477 6.3501772 10.0347119 10.1715878 7.7915211 5.4963089 NA 13.7066114 9.4543443 2.4285712 9.7118323 1.0500489 3.2516888 9.7168109 9.9117615 10.0889733 10.6206690 9.7553411 10.4389326 3.7725191 10.8557981 10.4775767 7.6289930 8.8036052 9.9533336 11.4681177 15.2210434 8.5620123 10.4462309 10.8908322 9.0007561 2.9760520 3.5861042 9.0668625 8.1855068 11.5495015 -1.2719489 3.9375798 7.4354853 8.9984215 10.4754800 10.5298345 5.4560472 4.9949146 9.8268162 12.1116955 3.8574138 13.1686061 7.3647510 7.7915211 13.0557490 12.3727711 12.8719876 8.2438261 10.6353925 10.7178754 10.6467212 10.7958966 4.7281273 9.1752095 11.3726585 12.0516032 4.1204432 10.4624124 8.8062770 2.1875461 4.0135248 9.1947125 10.9213435 10.0889733 8.6153468 14.8941127 10.3978971 8.5562627 8.8418684 3.9375798 14.8525100 10.0393068 13.5223389 13.0500543 10.1375171 9.9460838 7.7449347 10.9111039 0.00597000 0.96247000 0.96821000 -0.01422800 -0.01829400 -0.00027724 0.01419000 0.00000000 -0.01009400 -0.01638400 -0.01638400 -0.01638400 -0.01078400 -0.01078400 0.00291330 0.00291330 0.00291330 0.00666530 0.00041593 0.00763920 0.01894300 0.00847430 0.00083195 0.00083195 0.00083195 -0.00940460 -0.00940460 -0.00940460 0.02711100 0.00597000 0.00597000 -0.01395300 -0.01829400 -0.00027724 -0.00387790 0.01419000 0.01419000 0.00000000 -0.01009400 -0.01009400 0.43378000 0.43119000 -0.01638400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 0.00291330 0.00416320 0.00041593 0.00041593 0.00041593 -0.00263220 0.01782400 0.00847430 -0.49566000 0.00083195 0.00083195 0.01239200 -0.00940460 -0.00940460 0.02315700 0.00597000 0.02174400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 8.7779746 12.8452822 7.8804113 10.2359208 4.5094868 11.3972327 5.2199778 2.5354807 9.4526401 8.6440055 0.7281382 8.0296224 4.3428392 9.6953524 9.8631942 3.2516888 8.4440881 9.2750206 10.1663982 10.4458026 9.5445178 7.0545555 11.1241957 0.7281382 10.1549150 10.4389326 7.7196482 -1.2719489 10.4775767 4.3130862 13.1768878 12.1357923 7.2865467 10.4687502 7.6618166 9.4224841 4.1875540 3.6823261 -0.2719489 6.1957315 9.1721057 10.0250424 10.0164155 3.6350114 8.9418138 7.3428356 10.6365188 5.3574816 10.0192969 -1.2719489 10.7014648 3.0500489 4.7942131 9.9078922 6.8975502 5.7942157 9.4763191 7.0812725 8.2769479 1.3130717 14.1468682 0.3131297 10.3354565 1.3130717 9.2884589 5.5736169 7.4526399 8.8955444 12.611201 4.561014 8.758793 13.612678 10.306801 10.878825 12.326528 12.246779 9.269223 10.314497 13.508358 11.950770 8.185507 8.143868 -1.271949 7.018145 10.915478 11.4089252 7.4250933 8.8727844 9.2309581 7.2903682 10.3747659 6.8574088 7.7337509 11.0886989 6.2827159 7.8574094 10.1391075 5.7024248 11.8092767 10.5143958 8.4679067 8.8142623 10.9760537 5.8261595 10.0889733 10.1279381 11.1058790 9.5386978 10.3561160 8.3465115 -0.2719489 9.8604009 7.9760537 7.6939106 10.4754800 5.6823233 11.6185805 9.8268162 7.2279721 14.5037362 10.2304607 10.5282171 13.2164057 11.2946560 9.7168109 3.0500489 TCGA-OL-A5RY 52 0 NA 752 breast stage iia t1c n1 mx 2-10-2014 female 2011 NA yes infiltrating ductal carcinoma yes 1 black or african american NA 296.27.0 NA NA 2 5 NA NA 2 6 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.946798e-07 5.562279e-08 12.15486326 8.25167649 6.67872689 10.68007183 1.61263558 9.49426139 -0.97227974 8.75899400 10.78172731 9.02202846 8.96578428 7.12570689 7.75899400 9.76407689 6.13619959 9.63130131 9.53843922 10.48197426 8.41999219 7.59753043 10.77921900 11.36250687 13.24820444 10.43918594 9.22979867 10.34903934 7.63130149 10.09913737 1.61263558 0.02772026 9.44024483 12.20742858 12.53683139 8.53150077 17.02049715 11.10949122 10.34621774 3.55123299 NA 7.20260089 8.61075763 7.28034022 7.81883778 10.68454666 -0.97227974 11.91146375 10.25288241 7.64238461 9.56618403 9.29563212 7.52752079 6.31307712 0.02772026 14.77617943 11.25916919 1.61263558 8.45393976 -0.97227974 6.06109789 9.46126047 10.22673381 8.91184555 9.53745003 9.41029891 10.50896982 3.61263558 9.78005562 9.52052950 5.64238389 7.66066982 10.79420383 7.75559532 14.92738590 6.24645559 9.73417105 9.82046524 8.86687862 1.83503474 5.43706457 8.06659405 8.29446131 11.84984742 -0.97227974 4.38522394 7.04448374 9.88176417 11.06899185 6.80246208 7.29446177 5.23712772 10.03890226 11.51576616 0.02772026 13.31970895 5.13619959 7.26129480 11.66656333 13.95647089 12.37141587 8.06659405 10.86609104 10.79544561 10.17504524 10.03400107 3.61263558 8.79751271 11.52527732 8.90725814 NA 10.86333065 9.07206908 0.02772026 2.34383417 9.12307200 10.65566470 9.81802352 8.83985223 15.85710040 9.80410794 8.63500521 6.71417544 3.11513315 14.15070511 7.51952775 13.01253840 12.94541997 9.03470214 9.67423359 7.59372874 9.48307409 -0.0098405 0.0707490 0.0707490 -0.1314300 0.0043021 0.0055912 -0.0440090 0.0183000 0.0183000 -0.1304400 -0.0020784 -0.0020784 0.0112610 0.0112610 0.0493980 0.0493980 0.0493980 -0.0442800 -0.0442800 -0.0018895 0.0019418 -0.0503700 -0.1480800 3.6569000 0.0037465 -0.1292700 -0.1292700 -0.1292700 0.0051359 -0.0092666 -0.0098405 0.0171240 -0.1314300 0.0060279 0.0055912 -0.0440090 -0.0440090 0.0183000 0.0183000 0.0183000 -0.0070576 -0.1703100 -0.1665000 -0.0834650 -0.0834650 -0.0834650 -0.0834650 0.0112610 0.0112610 0.0125990 -0.1049600 -0.0442800 -0.0442800 -0.0442800 0.0079175 0.0000000 -0.0503700 0.0139110 -0.1480800 0.0037465 -0.0357210 0.0038640 -0.1292700 0.0051359 0.0129340 0.0088920 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 10.2932900 13.8057007 6.8856561 10.4486878 6.2075845 11.2193511 7.4156919 3.8350347 10.1263651 9.0177789 NA 8.1621012 4.6126356 11.0863432 9.6849935 1.8350347 9.8941811 9.4962990 10.0099555 9.8114917 9.5273515 6.1257069 11.1569580 3.1975981 7.3450876 10.5089698 5.8478541 NA 10.6952300 4.4539389 13.2249685 12.6108753 9.0332994 10.5003658 9.4983339 9.4570816 3.1151331 2.4871004 0.6126828 5.9224928 8.8139447 10.5755335 8.4993500 5.8478541 9.7974054 8.1151378 10.0500428 5.3130789 9.9164183 9.8542234 10.2291863 3.1151331 4.4871068 9.6131165 5.6277352 9.3641815 10.4205290 9.3314558 11.2032245 2.6126356 14.1326831 NA 11.0621301 NA 9.1569580 5.7281137 7.9011191 9.4993502 11.4837881 6.6126371 8.8414562 17.0204971 10.1388106 10.7492015 10.6845467 8.8903123 9.3061244 10.3445222 13.2325517 11.2471460 8.2944613 8.2100693 0.6126828 7.8478541 10.3263104 11.067965 4.809034 9.076148 8.521531 7.612638 9.634709 9.168505 8.451841 10.439186 6.027676 2.835035 7.931557 8.048655 11.620132 10.849449 7.555152 9.517523 8.109824 8.072069 8.911846 10.603687 10.784648 10.239563 9.655209 7.623865 4.755598 9.625038 8.019849 9.998500 11.068992 7.141417 11.003165 10.038902 6.535470 14.400506 10.395090 10.566834 11.969823 11.446055 9.014939 4.612636 TCGA-OL-A5RZ 57 0 NA 679 breast stage ia t1b n0 mx 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes NA black or african american NA 296.27.0 NA NA 1 1 NA NA 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.113666e-06 6.674735e-07 12.42863327 5.01011293 7.04963948 12.05675898 NA 9.11098226 NA 8.96799655 11.01118434 7.89391853 9.27004134 7.29961833 7.43797257 10.23004806 5.03283259 8.96060930 10.60173755 10.87518176 5.26165116 1.84020136 11.44116115 10.00867932 14.28962978 8.62902105 8.08539969 11.24198011 3.28076335 10.28253745 -0.96719385 0.03280615 6.35475892 8.62341844 12.88125872 4.89081145 17.72785573 12.89110384 7.96060959 6.10964681 2.03284140 5.29961833 8.72282938 3.20276249 6.29021980 12.72435683 -0.43109233 8.46745964 12.35349094 3.78771454 9.43001403 11.54359554 8.53466862 5.93972260 0.03280615 11.69465179 8.10964681 NA 9.01867339 NA 2.49226340 9.45804728 13.43324391 8.15953585 9.28903997 9.18638343 9.44222238 2.61779215 11.16147022 11.06522156 6.76754092 5.66218841 14.78672712 11.13086345 13.65494042 6.93309457 9.06487719 9.34117053 8.26884560 0.61776865 4.98702975 7.42084869 7.86255430 9.09892059 -0.96719385 4.16211334 7.12558808 9.11098226 10.66537225 7.51664713 3.93972495 4.20275465 9.24471965 12.30939202 4.61779215 12.31736634 5.50856493 6.69104276 9.58165328 13.75563892 12.23081592 5.20275465 11.42729409 10.87203518 10.01154190 10.30254251 3.73326756 9.72282938 11.26104881 12.00023780 0.61776865 9.99065895 8.05242187 -0.96719385 4.00000000 8.19270263 10.52167571 8.44645930 7.73327095 15.04922620 9.14787497 9.00581119 7.73327095 0.03280615 13.82750109 6.29021980 11.91509233 9.86888180 9.97387900 9.91318024 6.78102392 10.52591128 -0.8914100 0.0288050 0.0288050 0.0202450 0.0028169 0.0275400 -0.0431540 3.6569000 -0.4506800 -0.9564200 -0.9325000 1.1096000 -0.0027284 0.0035111 0.0286650 3.3581000 -0.4394800 -0.0846200 0.0132560 -0.8972300 -0.4337300 -0.0344530 2.2361000 3.6569000 1.4391000 0.0090737 0.0090737 0.0090737 3.6569000 0.9645900 3.6569000 -0.1248200 -0.9255300 0.0217330 0.0275400 -0.4673100 -0.4673100 2.2632000 -0.4506800 0.4782600 0.5263100 0.3379700 -0.9383300 -0.5404400 -0.5004100 -0.2835500 -0.2835500 0.0035111 0.0035111 0.0286650 -0.9065200 0.5093800 2.4495000 -0.4671400 -0.9019600 -0.4463500 -0.0344530 0.5074700 -1.2929000 -0.8641800 0.0324650 0.0090737 0.0090737 0.0209460 -0.9007400 -0.9010500 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.835 -0.835 3.657 3.657 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.835 -0.835 3.657 3.657 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 7.4716232 12.2610488 3.2027625 9.9768113 3.1100792 13.2911766 2.0328414 NA 10.0136850 7.0607370 NA 9.6757856 4.1621133 10.7628769 10.1958520 4.5246843 5.6910428 9.7462179 11.1192994 10.6553408 9.7778839 6.6766877 10.2361794 1.8402014 6.8401863 9.4422224 2.8401812 NA 9.5146308 1.6178157 12.7771397 12.0801258 8.6102601 9.0935274 6.1202939 10.5029818 2.7332676 2.2027625 -0.9671939 0.6177686 9.9716759 10.2002496 10.8845804 4.0328326 10.3138224 9.8861410 10.7280597 6.4590955 8.7297988 NA 9.9177650 2.9397155 4.0328326 10.2257283 5.3700073 2.4922634 7.8625543 6.2027566 6.8010163 2.2027625 14.0013182 0.6177686 11.8993376 NA 7.2471509 3.9397249 7.9606096 7.5681066 11.744339 7.998616 9.015825 17.727856 8.872035 10.691935 12.724357 8.959127 8.778304 10.224507 12.634834 7.212741 7.862554 9.024353 2.354762 8.600787 12.132672 11.64431733 7.85301007 7.43797257 10.30837396 7.52868617 11.70886119 6.27123703 7.81090833 8.62902105 7.26165022 1.35473424 9.66491779 8.79350154 11.03071651 10.41220971 7.03845594 10.97351205 6.42514875 5.50856493 8.15953585 10.01154190 11.54408991 9.04405854 9.96873302 7.11498016 7.74363816 8.61869530 7.51152022 4.45909714 10.66537225 4.20275465 11.92252546 9.24471965 7.20275661 13.87542727 11.44830910 9.25320977 11.18511621 13.21087372 8.79438272 0.03280615 TCGA-OL-A5S0 66 0 NA 620 breast stage iib t2 n1a mx 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 2 black or african american NA 296.27.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.006051e-07 1.668684e-07 11.88262291 5.69221794 5.90243541 11.88339740 NA 8.01131393 NA 8.30981056 10.11913969 9.75619385 8.75957232 7.09660764 7.80115154 10.17017382 7.15421863 7.49957247 8.67084352 9.67978778 8.14907489 6.85268181 10.48535829 12.70278644 11.84176509 10.46117993 8.82875596 9.73403739 5.90243541 9.77795685 6.89630939 -0.98022693 7.55506686 10.18092372 12.65403571 7.97979386 12.69265913 10.72542429 12.17840156 6.43764389 1.82712799 9.30288015 7.74089114 9.93790975 6.76125867 0.60473557 NA 12.75619379 9.94088895 8.92517877 10.29418753 9.62804667 6.66364776 6.55117299 1.01977307 15.69331916 12.16413146 0.01977307 8.20466699 NA 3.01979086 7.74771232 9.67353257 8.76294339 7.65278691 7.37293904 10.09058367 3.77468165 9.56379039 10.81461387 4.92668264 6.96230609 NA 4.63450034 14.85682840 5.63567895 9.12700898 10.13938149 10.05183755 4.41211082 -0.98022693 7.58964740 7.94163278 8.93716399 1.01977307 5.20961712 8.08856990 10.13613588 10.33776973 5.96230609 5.73403756 5.46273619 7.57821266 11.74664863 1.82712799 13.37438562 6.60475484 6.27717951 11.27334390 14.07214763 11.99097613 8.93716399 11.64275878 10.25460928 9.92221227 9.73317840 1.60473557 9.04077191 11.70497866 8.67442781 6.26771931 10.91271408 9.33267482 -0.98022693 2.72135078 8.61784430 9.87466020 9.06281924 8.64184367 15.26818275 9.72023160 8.88397815 5.26771931 4.10725265 11.41987077 5.58964665 13.24552650 12.88194488 9.53746129 9.27835792 6.80769495 9.61638233 0.0685220 0.6412100 0.5411700 -0.3570400 0.0055529 -0.3866000 0.3592400 0.6224200 0.2280800 -0.7515000 -0.3351400 0.9583600 1.2775000 0.2367400 0.0508190 -0.3791400 -0.3762800 0.0220240 -0.3819000 -0.3300600 -0.3578300 0.0241270 -0.3771800 1.0508000 -0.3672500 -0.3921900 3.3236000 -0.3787600 0.0479780 -0.3531600 0.0685220 -0.3679300 -0.3570400 -0.4213600 -0.7660000 -0.6038100 -0.7526200 0.6224200 0.2280800 -0.5610700 0.4456200 0.0688080 -0.7515000 0.0081959 0.0134660 -0.3516800 -0.3516800 0.2367400 0.0443330 -0.3453800 -0.3820000 0.0220240 -0.3819000 -0.3819000 -0.3382500 -0.3661200 -0.7534000 -0.3561300 -0.3771800 -0.3672500 -0.3655600 -0.3921900 -0.3787600 -0.3609000 0.1280000 0.0262360 0.192 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.360 -0.360 -0.759 -0.366 -0.319 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 -0.247 0.110 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 0.529 0.192 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.360 -0.360 -0.759 -0.366 -0.319 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 -0.247 0.110 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 0.529 8.37734373 15.42282053 3.10725265 9.76462565 3.01979086 11.52981421 4.14907235 3.41210404 9.61970462 7.01414548 8.89015664 8.66725030 4.77468165 10.74728694 9.41425458 4.34172251 9.06691581 9.11386950 6.96815874 10.04700677 8.98462353 4.44605768 11.16221803 0.01977307 7.59722052 10.09058367 3.10725265 NA 10.15678301 4.10725265 13.07558267 12.94590251 8.47922328 9.99348926 10.71109916 11.16189889 2.18972969 3.18971388 NA 1.01977307 9.42812166 10.37844302 7.25819666 6.82069211 9.82906957 9.47614632 10.33776973 5.93865512 9.99850229 3.47921762 10.48688790 1.34170116 4.22924182 9.91022343 8.21400675 4.69221515 9.85505284 8.47100288 7.25341166 4.90243541 13.75661656 0.60473557 10.87036942 3.60475929 8.57438084 4.85268306 8.76125901 7.77801535 9.5246109 9.9070125 7.8367756 12.6926591 9.9009059 11.3479057 0.6047356 9.2486105 8.8255357 9.7519592 12.8924667 11.9947441 7.9416328 8.7219645 3.6047593 8.0027852 9.3155608 10.5345059 3.1072527 9.0338123 8.1046003 8.0669158 9.3214481 6.6851272 6.4792241 10.4611799 11.5693359 -0.9802269 8.1464964 8.5749946 10.3501486 10.2133173 7.1512368 9.7262878 3.7202347 6.0750748 8.7629434 10.1283163 10.0296205 11.4442206 9.4853582 6.2096171 NA 8.8804909 7.3417198 5.6345003 10.3377697 5.5433536 10.5584658 7.5782127 7.4585838 14.5707791 10.5506858 10.4110354 12.2644530 11.3445350 8.3618666 3.6047593 TCGA-OL-A66H 74 0 NA 812 breast stage ib t1c n1mi mx 2-10-2014 female 2012 NA yes mucinous carcinoma yes NA black or african american not hispanic or latino 305.23.0 NA NA 2 2 NA NA 1 4 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.171709e-07 1.668684e-07 12.0867582 6.1976001 7.3231304 12.3893322 -1.2618807 9.5797327 4.1975981 9.0049550 10.9872818 9.2429873 9.4017265 7.8256311 7.7493955 9.2646675 7.8176533 9.5268867 10.9633758 10.0763476 7.2098432 4.6923658 11.2459630 10.5938155 13.0555103 9.0634738 9.5867912 10.3193689 6.0419482 9.6959959 NA 1.7381625 7.8545125 10.4088246 13.4390957 6.9180773 12.6643717 12.3196043 10.5009656 6.9329257 4.1304861 5.1304861 7.9180773 10.2592780 4.4660920 12.6863530 1.3231395 10.2047546 13.5910392 2.1976138 9.7833000 9.6015803 3.2617264 5.9378411 NA 15.5500119 10.6042340 1.5455236 7.4420718 NA 3.1975981 9.3537979 10.3008878 9.8486516 9.2239976 9.2908374 9.8834637 5.8777197 10.9124699 9.8434221 6.3004111 7.8256311 0.7382058 10.1560209 14.6563794 7.1015146 10.6600093 9.8156516 7.6540474 NA 2.8256228 7.4997199 7.9353849 9.7839280 -0.2618807 4.7154486 7.7325216 9.7528862 10.6446832 4.4930580 6.6865355 4.7605350 10.5162455 11.6488111 3.5455236 14.1280349 6.4796348 7.5773722 11.3144165 9.7374637 12.2395080 8.2380144 10.4101517 10.4867805 10.4123783 9.9771701 3.1975981 8.8942515 11.2111130 11.0780183 1.5455236 10.0973688 8.8597019 1.0601166 3.3068018 8.9549143 10.9609633 9.6689057 8.6085332 14.9315012 10.9283017 8.9657843 7.6023544 2.6450560 16.0030599 8.5836582 11.7455461 11.7079146 9.5742187 9.4584126 6.7549770 9.7788827 0.00166420 0.00166420 -0.00170930 -0.00110870 -0.00110870 -0.00304750 -0.00401620 -0.00304750 -0.00304750 -0.00740760 -0.00740760 -0.00691950 -0.00152430 -0.00152430 -0.00069303 -0.00069303 -0.00069303 0.00041593 0.00041593 -0.00871460 0.00305220 0.00555290 0.00694350 0.00694350 0.00694350 0.00332990 0.00332990 0.00332990 0.00124810 0.00166420 0.00166420 0.00031376 -0.00110870 -0.00650500 -0.00981850 -0.00401620 -0.00401620 -0.00304750 -0.00304750 -0.00304750 0.62460000 0.63774000 -0.00871460 0.00097064 -0.58019000 -0.00106360 0.00583090 -0.00152430 -0.00152430 -0.00526100 -0.00069303 0.00041593 0.00041593 0.00041593 -0.00747200 0.00305220 0.00555290 0.00000000 0.00694350 0.00694350 0.00750000 0.00332990 0.00332990 0.00124810 0.00249690 0.00736090 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 8.1411804 11.9182329 3.4386122 9.2636892 3.0723116 11.3401712 2.5455236 -0.2618807 9.4754157 7.2889150 1.0601166 6.2300224 0.3230818 10.3141802 9.4070534 2.1976138 8.8189860 9.0791311 10.0067104 11.3087356 9.7778413 6.5961495 10.7342887 3.6923602 10.1044905 9.8834637 5.1975981 -1.2618807 10.8032479 3.6450560 13.0145109 12.4377408 7.8440768 10.3231309 11.6312803 9.5961493 -0.2618807 2.1976138 NA 4.6689077 9.3684355 10.1680981 10.5158346 5.1132087 5.8010241 8.6644644 10.6491857 3.7381733 9.9093451 -1.2618807 10.8453855 2.5455236 9.6397895 10.1296483 6.7770869 5.5195293 10.1017556 8.7825626 10.5527508 1.9080827 13.7223197 -1.2618807 11.5714538 NA 8.2734436 5.7381679 7.2812003 9.8414562 11.8962794 5.8361994 8.8764402 12.6643717 10.5075930 10.4901308 12.6863530 12.1163277 8.9316937 9.7416862 12.7432665 12.4856271 7.9353849 7.2850628 0.7382058 7.3080241 9.6503092 10.7542802 6.2617301 8.6806830 8.3080241 8.1539102 9.9351699 7.8123095 10.2802329 9.0634738 7.3565541 2.8256228 2.8256228 7.7353475 8.6023544 10.1342379 8.7296901 9.8355422 8.4506954 5.3380821 9.8486516 11.2481907 11.4524139 9.4017265 10.0600964 7.8414562 NA 10.2049994 6.6689063 6.7605363 10.6446832 4.3231322 11.0209672 10.5162455 6.5063528 13.8710295 11.0746749 10.3528782 12.5864979 9.9937871 8.9168331 -0.2618807 TCGA-OL-A66I 36 0 NA 714 breast stage iia t1c n1mi mx 2-10-2014 female 2008 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 305.23.0 NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6.952849e-07 2.503025e-07 12.1096365 6.4187010 5.4806884 11.5562052 0.3242346 9.2899684 -1.2608432 8.4991096 10.8953047 10.4730843 9.2812861 7.9942499 8.4500280 9.6669996 9.8411973 9.4213384 8.6249179 10.6260613 8.6861279 5.2310752 11.0435729 11.4907656 12.3434273 10.8170387 9.5409299 10.2465207 8.8594593 9.4125307 6.4806884 -0.2608432 8.9800130 9.7883895 12.3976562 7.6279650 11.9405798 10.8375827 9.5705288 7.0199921 5.9290453 9.2715774 8.7307435 9.3232444 8.5401215 5.3391338 NA 12.6704208 9.2899684 8.0521045 9.4291234 9.8832425 6.7945042 8.0246239 3.2627789 15.8673957 12.1402291 1.7392000 10.5144203 1.0611541 5.1986513 9.2995545 9.5736926 8.6034079 9.2578748 9.0315432 10.2335771 5.9486756 9.0118514 11.2014682 4.2627864 7.2230373 1.0611541 6.1315380 14.9464647 7.6962366 9.8113541 9.6721744 11.1686283 0.7392433 NA 8.2744970 8.2390677 10.2504801 NA 5.0430032 7.4907659 10.5069922 10.5717161 5.5205825 8.1821649 5.4806884 10.0690179 12.0005820 2.0611541 13.9599400 5.4396597 6.8990934 10.6111268 12.4156195 12.4345586 6.7560305 10.5086462 11.0467070 11.1858293 10.5870619 3.0611541 8.4874144 11.0807404 10.1597081 5.1486128 10.4607480 9.8293339 1.3241769 2.8452291 8.9535405 9.7781406 9.5705288 9.5457711 14.8044904 10.5905802 9.7532420 6.4327089 3.9871480 11.3839791 4.6218643 12.2122931 12.8638276 9.3758462 9.3731251 7.4327089 10.3645423 -0.0616890 1.1591000 0.2540200 -0.0454990 0.0043021 0.2024400 0.0926790 0.3551200 -0.0295840 0.2372100 0.7199900 3.6569000 0.3841900 -0.2540600 0.1848000 -0.0585960 -0.0585960 -0.0024938 -0.0670970 -0.2658800 -0.2643200 -0.3445800 -0.2518900 -0.2276100 -0.2276100 -0.0729420 1.0902000 -0.0479360 0.4754700 0.3582200 -0.0027541 -0.1093300 -0.0528680 -0.2782200 0.4251900 -0.2753500 -0.2753500 0.3551200 -0.0295840 0.1783000 0.1102300 -0.5807800 0.1275600 -0.0509110 0.3906500 0.2105400 0.2386100 -0.2620900 -0.2771500 -0.4072700 -0.0814720 -0.0385780 -0.0198630 -0.0354480 -0.2664900 -0.2461800 -0.3445800 -0.0201380 -0.2518900 -0.2276100 0.5953300 -0.0729420 0.4131200 0.3069700 -0.0217840 -0.0441440 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.265 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.000 0.000 0.271 0.486 0.206 0.206 0.382 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.265 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.000 0.000 0.271 0.486 0.206 0.206 0.382 9.8620496 13.5158602 3.9486756 10.0065936 3.9091490 12.6467695 3.4396630 -0.2608432 9.2480068 8.0521045 3.9091490 8.9930691 3.4941083 10.5469789 9.4560410 2.1986513 8.5784255 10.8425094 8.1401012 8.9191306 8.8574747 6.6279643 10.3414564 2.9871571 9.2851513 10.2335771 1.5465611 -1.2608432 10.8816478 3.2627789 12.9634494 13.2134345 7.4874148 9.5784253 10.5489897 10.1175165 2.6461166 4.2627864 NA 1.0611541 9.0418606 9.8260212 6.8372533 4.5465735 8.7213880 7.1443625 9.9841800 4.6934200 9.8326391 2.0611541 11.3152334 4.9290477 5.5721105 9.8468767 7.2825241 6.2706037 9.6824690 9.0801844 8.9339783 3.7392216 13.6429152 1.3241769 11.1536425 NA 9.3603577 3.4396630 7.9041282 7.4773139 12.113034 10.163388 8.352090 11.940580 9.755333 10.573693 5.339134 8.921616 8.616521 9.761589 13.977290 12.568350 8.239068 7.575272 2.439650 7.418702 10.788049 11.155491 4.131540 8.754637 9.582357 8.626442 10.638503 9.339134 6.262783 10.817039 12.031543 1.739200 6.460322 8.608322 12.714980 12.723551 7.650374 8.706448 6.929047 7.456898 8.603408 10.652859 10.959298 11.535667 11.083795 7.439661 NA 10.253462 7.769889 7.527124 10.571716 5.919130 11.719897 10.069018 7.487415 14.048449 11.209880 11.112631 12.158260 11.279592 8.854265 3.324177 TCGA-OL-A66J 80 0 NA 1996 breast stage i t1c n0 mx 2-10-2014 female 2008 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 305.23.0 NA NA 2 2 NA NA 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.168079e-06 2.224912e-07 10.8097301 9.2054414 6.5011413 11.3469441 2.8500993 9.7388335 1.8500793 8.9494380 10.7119526 10.2515032 9.8122633 6.9638324 8.5797112 10.1424119 5.4647989 9.0200154 9.8158746 9.6662741 7.6702696 4.2076430 10.9618781 11.0631946 9.3911869 11.7519000 8.8752299 10.0497627 5.4794472 9.5848000 -1.1497606 1.1720394 9.1003888 10.9378847 12.6168263 7.6892943 13.8095490 12.8391300 10.7088484 5.9161804 2.6574342 7.1943865 8.7418741 5.9998377 6.9638324 12.6332932 2.6574342 11.0124817 14.1730747 2.7569806 9.7856900 9.9107863 10.5763085 5.4794472 -1.1497606 13.9517201 8.6798129 3.6574457 8.2930338 -1.1497606 2.3095255 9.7266073 9.8330839 10.1133596 10.9864407 10.0873003 10.3509322 7.3459454 10.3054176 10.2354135 6.6116416 6.8724582 2.7569806 11.3154016 14.7172001 6.5181952 10.3702179 10.3519275 8.4885263 0.8500793 -1.1497606 7.9819474 8.1765198 10.3100342 -1.1497606 4.7080713 6.6638712 10.1663719 10.4601924 6.8890098 5.3578862 4.6829777 9.9242317 12.1279589 7.5295703 13.9442093 6.1354918 7.7388334 11.7626055 11.9510811 12.6247745 8.7524653 10.3519275 10.6900814 10.6833757 9.6493719 5.5239289 9.1320203 11.1227201 11.4648002 0.4350952 10.5613271 8.6066465 1.1720394 2.3432372 9.1720184 10.6582501 9.9415257 8.7250717 15.0456548 10.2631894 9.4104232 8.5966046 3.4350551 15.9965098 6.4350535 12.3916710 12.3676367 9.3519275 9.8703758 6.9375527 9.4210276 0.00206550 0.00206550 -0.05660400 -0.00926660 -0.00926660 -0.00235530 -0.30098000 0.00000000 0.00000000 3.65690000 0.58811000 0.00541390 0.00116710 0.00555290 0.00791750 2.00330000 -0.58717000 0.02567100 -0.00106270 0.00152550 0.01447000 0.00875280 0.00638710 0.00638710 0.00638710 -0.00152430 -0.00152430 -0.00152430 0.01628600 -0.60509000 0.00206550 -0.00097017 -0.00926660 -0.00235530 -0.00235530 -0.30098000 -0.30098000 0.00000000 0.00000000 -0.00340420 0.00138680 0.01377200 -0.60757000 0.00610900 0.00610900 0.00610900 0.00610900 0.00555290 0.00555290 0.00791750 -0.59360000 -0.00106270 -0.00106270 -0.00106270 0.00152550 0.01447000 0.00875280 -0.59439000 0.00638710 0.00638710 0.00889200 -0.00152430 -0.00152430 0.01628600 -0.00221680 0.02693500 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 8.5539940 13.7737428 8.8958500 10.4032396 2.6135081 10.7395943 2.5505313 0.4350952 8.9094347 9.5634768 NA 7.8807578 5.6049787 10.1027557 9.7041795 2.0200221 8.6798129 9.1238860 9.7734178 10.4703102 9.4008660 7.9242317 12.1525865 2.3095255 9.4265746 10.3509322 4.9998377 NA 10.4817221 4.1720154 12.3786665 11.1062990 8.4142400 10.7146634 7.9612263 9.8985772 3.9793760 2.3095255 0.4350952 2.3095255 9.4027595 9.6517987 9.6542214 7.1215532 7.4095437 7.6116416 10.8700285 4.7569806 9.7135023 -0.1499207 9.9553440 1.8500793 9.2982067 9.8295656 7.3077992 3.4350551 10.0710732 8.3298708 6.1168762 1.4350418 13.5685162 -1.1497606 10.6513946 NA 8.4957487 5.6445053 7.9896414 9.5145375 14.6247956 5.2251284 8.7002771 13.8095490 10.3853657 10.2207777 12.6332932 12.4263385 8.1854806 9.7327334 13.0109072 11.9018091 8.1765198 7.6606620 0.4350952 7.9481225 11.2199603 11.420658 4.916180 9.623229 9.233795 7.427519 10.649898 5.999838 6.435053 11.751900 7.393122 2.020022 5.926906 6.916125 9.762231 10.184364 9.561757 9.882825 9.217505 4.780830 10.113360 10.495298 11.358380 10.142412 9.713502 7.557449 NA 8.929362 6.821634 4.098015 10.460192 6.948122 11.415430 9.924232 6.107479 13.986759 9.807918 10.020641 12.440326 11.047614 9.840903 2.309525 TCGA-OL-A66K 72 1 1275 1021 breast stage iia t2 n0 mx 2-10-2014 female 2010 NA yes infiltrating lobular carcinoma yes NA white not hispanic or latino 305.23.0 NA NA 3 3 NA NA 1 4 2 3 3 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.727937e-07 1.946798e-07 10.7859592 6.8637477 8.1302009 11.2567986 1.7293135 10.2886986 1.7293135 9.2211746 10.9225389 12.6357424 9.4280262 7.0602387 8.4674140 8.6615362 8.3385002 9.2131373 10.3704701 9.8161213 7.1928461 -1.2705560 11.6611671 11.1469104 8.9363358 10.9572383 9.2597280 9.9581403 4.7737168 10.3951016 NA 3.4842155 6.9533234 10.7058857 12.3202594 8.4791909 13.6492091 12.4662519 9.9363358 6.7516900 2.8992530 7.9363358 8.3199087 9.2781435 7.4908725 12.1077519 1.5366995 10.3817185 14.0615330 3.1216454 10.1693031 10.0989189 7.9092307 3.8586077 NA 13.9725629 11.4296551 0.3142905 8.9314455 NA 3.4297632 9.7675547 10.2410742 10.4319272 11.0978280 10.0071902 9.7784895 1.7293135 11.0225058 10.2040415 8.2091019 8.7250888 4.8790686 11.9733880 14.7184277 6.8851521 10.8521496 10.8177786 10.4026306 1.7293135 1.0512329 7.4088019 7.9484899 10.3727269 0.3142905 5.5996868 7.0285294 9.1408326 10.3986495 11.4234618 5.2211733 3.9387751 9.1545374 11.7340687 2.3142905 13.3376919 8.0780499 7.9984483 11.9812477 12.8202610 12.6962776 9.0658281 10.5217052 10.9369460 10.7357984 9.7482172 3.9387751 8.5996864 11.3648130 11.3352640 NA 10.2030274 8.5318380 0.7293570 4.2582023 8.7335421 10.7893419 9.5398932 8.5253611 14.2897440 10.6180648 9.2829508 8.3477073 3.0512503 14.6221489 8.7832474 12.6716528 12.7482172 10.0841219 9.6878743 6.9772490 10.6149722 0.75471000 1.12730000 1.10110000 -0.29650000 -0.29650000 -0.28917000 0.01880300 0.00708270 0.02256300 0.02146300 0.02146300 0.02146300 0.00000000 0.00000000 -0.29945000 -0.29945000 -0.29945000 -0.31187000 -0.28727000 -0.31170000 -0.62389000 -0.31517000 0.23674000 0.23674000 0.23674000 -0.03626500 -0.03626500 -0.03626500 0.00041593 -0.30815000 -0.29296000 0.00208050 -0.29650000 -0.28917000 -0.32400000 0.01880300 0.01880300 0.00708270 0.02256300 0.02482900 0.32012000 0.31906000 0.02146300 0.01321300 0.01321300 0.01321300 0.01321300 0.00000000 0.00000000 -0.29792000 -0.29945000 -0.29783000 -0.28727000 -0.32321000 -0.94832000 -0.62389000 -0.31517000 -0.63642000 0.23674000 0.23674000 0.02960600 -0.03626500 -0.03626500 0.00041593 0.01516800 -0.32403000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 -0.293 0.808 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 -0.293 0.808 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 8.3440313 12.9486414 8.1660330 9.8675933 2.1887491 10.8976803 -1.2705560 0.3142905 9.1969271 7.8141300 NA 8.6747653 3.8167840 10.1059897 9.6127285 2.5366746 8.0824684 8.7461300 11.8304765 11.2927562 9.6098388 7.4469981 10.5467049 2.0512329 10.1519119 9.7784895 3.8167840 NA 10.6414624 3.7737116 12.4807610 11.6335798 7.8942284 10.6218644 7.6211053 9.6089048 5.2684793 2.0512329 -0.2707300 6.0422044 9.5834108 9.6965479 10.3812702 5.2991787 8.2785094 8.1764046 10.8048007 7.9265385 9.9399929 NA 11.4574547 1.0512329 5.1043618 10.1535823 6.7379179 3.5873050 9.6900476 7.3623165 7.0467344 NA 13.3324263 -0.2707300 10.4083618 -0.2707300 8.3857464 7.0691715 8.1825920 8.4210650 11.619453 4.252885 8.827354 13.649209 9.875056 11.004573 12.107752 12.037803 8.836539 10.071396 13.210995 12.270055 7.948490 10.170710 -1.270556 7.440128 11.412535 11.065549 7.117339 9.242062 8.362317 8.351373 10.118501 6.113025 8.415822 10.957238 7.996108 1.314290 8.084673 6.436129 9.514774 10.357767 8.828669 8.872705 10.105990 4.879069 10.431927 9.846315 11.180790 9.539893 10.122176 8.028529 NA 9.085289 7.268480 5.660059 10.398650 10.031960 11.083554 9.154537 6.928994 13.694475 9.929607 10.058557 12.801287 10.755499 9.928994 1.729313 TCGA-OL-A66L 71 0 NA 945 breast stage ia t1c n0 mx 7-8-2014 female 2010 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 322.20.0 NA NA 2 3 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.09465128 7.98094840 5.01312723 11.44873766 0.51065816 8.98771196 NA 7.83855537 10.48504296 12.20106291 8.72818209 6.97551440 7.73623753 9.47833503 6.35193039 8.19010862 10.02567099 8.89289218 6.83855474 6.20179067 11.92249235 11.14755500 11.08080028 10.94386603 8.71193536 9.56771751 6.88566831 9.17596415 -0.07430434 1.92565769 8.12042245 10.43741846 11.53004762 6.86230384 12.97091357 12.18393741 11.21798750 6.47256088 1.24762376 7.47641247 7.60514612 8.76644377 6.85640312 11.54840406 -1.07430434 11.49195779 13.02048579 6.88566831 10.69932015 9.23854876 9.74903306 7.24307875 -0.07430434 15.45144324 10.90972818 -1.07430434 9.03810526 NA 2.24759338 8.54588576 8.55684284 9.50968872 9.40544614 7.99980725 10.13268017 2.62611201 9.39123220 9.89217136 8.22487378 7.66375804 2.51063285 10.45850874 13.93010578 4.98159696 9.36549680 9.06009225 7.32227069 3.38509966 4.68055503 7.56952223 7.16883957 10.55091807 NA 5.19245064 6.50309427 8.74584471 9.79680100 5.70702500 4.31798415 4.51062652 8.67218028 11.66418037 2.09558691 13.68633382 7.22487378 6.99175538 12.58966861 11.90723312 11.73904621 9.10681809 10.87001186 9.88494341 9.93829035 9.13755424 1.51060753 9.91789610 10.73060353 10.23457365 -1.07430434 10.18482056 7.97551440 -1.07430434 4.78364523 7.38099345 10.28156751 9.18893495 8.27660507 15.94575596 10.06585648 7.97005986 7.46482426 3.09558691 15.04527572 9.48695385 12.98281144 13.14104715 9.35088174 9.64334232 5.94803310 9.83786663 -0.00249380 0.56899000 0.60521000 0.00416320 -0.00110870 0.00539410 0.00194180 0.00485790 -0.60222000 0.00208050 0.00208050 0.00263570 0.00286820 0.00286820 -0.00235530 -0.00235530 0.00095013 -0.00122490 -0.00122490 0.00694350 0.00305220 0.00069327 -0.00373950 -0.00373950 -0.00373950 -0.00664320 -0.00664320 -0.00664320 -0.00443120 -0.00249380 -0.00249380 -0.00235530 0.00416320 0.00555290 0.00775260 0.00194180 0.00194180 0.00485790 -0.59380000 -0.62344000 0.00944910 0.00083195 0.00208050 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00286820 0.01894300 -0.00235530 0.00220630 -0.00122490 0.00166420 -0.00573520 0.00221930 0.00207430 0.00069327 -0.63537000 -0.00166290 -0.00373950 0.00597000 -0.01321900 -0.00664320 -0.00443120 0.00499690 -0.61748000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0779506 13.5800222 4.1735912 9.9829807 3.7200814 10.6996292 4.3519322 1.7330072 9.7906258 7.7711560 NA 6.6671328 6.2110687 10.1228825 9.9043763 2.9256577 8.4936217 8.5838774 11.2012084 11.9226688 9.7206502 5.6671314 10.9361939 1.5106075 9.8667134 10.1326802 6.4094809 NA 10.4850430 2.0955869 13.3289442 12.4659150 7.5329964 8.6552867 9.6165369 10.7066156 1.7330072 0.5106582 0.5106582 8.0051507 10.1265645 11.6409844 9.4754505 5.9700599 9.0159237 9.4850430 10.2638451 4.8798626 9.5641017 0.5106582 10.8411718 1.5106075 4.2832180 10.2175329 7.8285535 4.5106265 10.2688516 9.4502075 8.1901086 2.6261120 14.1693233 1.2476238 11.1335952 NA 8.2721795 4.3519322 7.3477303 9.5847698 12.69430197 4.99175311 8.00248144 12.97091357 10.18246425 10.88820039 11.54840406 10.86009390 8.83924348 9.67385866 13.78631638 11.45753463 7.16883957 9.45996864 -0.07430434 7.10059191 9.18423194 10.3403511 4.7836452 8.8798623 8.3665351 6.4725609 9.2243126 7.3602940 8.3830467 10.9438660 7.6467653 0.5106582 7.8295477 6.0895681 7.7233271 10.0754130 6.2743940 11.1974206 4.0131317 5.7070250 9.5096887 10.6416279 8.2610564 9.4792950 10.1111607 5.9590885 -1.0743043 10.0509565 7.0118020 6.6399108 9.7968010 4.8325559 10.7147919 8.6721803 7.6569847 14.4056671 10.7906258 9.8689133 12.3193244 10.7910125 8.6086603 3.0131228 TCGA-OL-A66N 59 0 NA 792 breast stage iiic t3 n3 mx 2-10-2014 female 2011 NA yes infiltrating lobular carcinoma yes 13 white not hispanic or latino 322.22.0 NA NA 3 3 NA NA 3 3 2 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.6123623 7.3976019 6.5755998 11.0420406 2.0901759 8.7195298 0.3532104 8.4944632 10.4678175 11.6923153 8.9026715 6.5561473 8.2580930 9.7759732 6.3976011 8.3550850 9.1562624 9.2908266 7.5691447 4.4961683 10.8600110 11.9631558 8.9886233 11.3008445 8.7078243 9.8397074 6.4264560 9.6246706 -1.2317521 4.5496076 8.0443695 11.2394122 11.6936141 6.4824901 13.6044927 12.4700930 10.6129509 6.3829542 2.9381729 8.0513335 8.0628659 7.8741533 7.0582635 11.7515950 -0.2317521 11.6262261 13.1594886 6.7107596 10.6693420 10.4547456 5.5097117 2.7682479 -1.2317521 14.0813066 12.7457387 -0.2317521 8.9617703 NA 5.0720243 8.8030439 9.4210901 9.3727983 10.2142945 9.1508691 10.4237757 2.5756028 10.2991390 9.6937995 7.2235722 7.9849909 9.8228493 8.5884242 14.6252541 5.1749177 9.8845891 9.4626029 8.4824905 2.3532104 7.7483847 8.3342992 7.1776358 10.9614624 NA 4.8767674 7.0018653 9.2750485 10.4850645 4.4961683 5.0536457 4.4406732 8.4192966 11.7766737 3.5231354 14.2838833 7.1733863 7.0303394 10.6912011 13.5361708 11.9183096 10.0185435 11.5266765 10.1685909 10.0179511 9.2680909 1.7682479 9.5413844 10.4712834 12.0337136 1.3532104 10.0155792 8.1497878 0.3532104 3.5490777 8.1014006 10.4538699 8.3437844 8.0279884 15.6818124 10.0408749 8.3054635 7.4859219 4.2918098 15.2063871 9.2194561 12.9140180 13.3953229 9.3447293 9.9217971 6.5626607 10.4894425 -0.24828000 0.95825000 0.96015000 -0.25253000 -0.25253000 0.00217930 0.25382000 -0.00142580 -0.00142580 0.48448000 0.48448000 0.49782000 0.01080200 0.00565180 -0.00433280 -0.00433280 -0.00433280 0.02184300 0.00000000 -0.51927000 -0.25386000 0.01233600 0.00301210 0.00301210 0.00301210 -0.00861640 -0.00861640 -0.00861640 0.25663000 -0.24828000 -0.24828000 -0.00142580 -0.25253000 0.00217930 0.00037596 0.25132000 0.24424000 -0.00142580 -0.00142580 -0.00142580 0.48970000 0.48970000 0.51799000 -0.25301000 -0.25301000 -0.25301000 -0.25301000 0.00565180 0.00565180 -0.00433280 -0.52023000 0.00000000 0.00000000 0.00000000 -0.51779000 -0.25386000 0.01233600 -0.52658000 0.00301210 0.00301210 -0.24342000 -0.00861640 -0.00861640 0.25663000 -0.24828000 0.01303300 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 8.6615465 13.7818730 7.0350311 9.9052361 5.5231322 11.8245440 5.0901717 -1.2317521 9.6485938 8.7209864 NA 6.9970643 4.7906105 10.0896095 9.6758868 2.3532104 8.1627075 9.1147587 11.5814250 11.1257971 9.9717522 6.1605633 10.5816254 1.3532104 8.8356794 10.4237757 3.3532104 NA 10.9109904 2.7682479 13.1334739 12.0149857 8.5029547 10.3966906 8.1818728 10.0845266 1.0901759 NA -0.2317521 6.0628664 9.9916434 11.1958198 9.8275895 6.1605633 9.6747599 9.5364295 10.3290555 5.4121007 10.0571111 -1.2317521 10.7819167 1.5756028 5.2760388 10.0081955 7.0737142 6.6011349 9.8904260 9.0161726 10.9026714 -0.2317521 14.5635238 1.0901759 10.7860974 NA 7.1776358 6.5496045 7.5659063 9.3304874 12.164270 5.549604 8.940672 13.604493 9.704883 11.286898 11.751595 8.318992 9.018342 9.421986 13.122012 10.733669 7.177636 9.704147 -1.231752 7.295722 9.666090 10.1610991 6.1691253 8.4157033 8.7850532 6.8871865 8.9137314 7.6478282 7.4617324 11.3008445 7.7597670 2.2276795 11.3667629 5.8924687 9.6945411 9.5231326 6.8715332 10.0285766 4.6989796 6.1080958 9.3727983 10.1459978 10.5113965 9.9135403 9.6706201 5.9874141 0.3532104 9.1909511 7.0674526 8.0373718 10.4850645 6.6011349 10.3020614 8.4192966 6.0901738 14.5966295 10.1014004 9.5916123 11.8570333 11.1457267 8.6432263 1.5756028 TCGA-OL-A66O 39 0 NA 220 breast stage iib t2 n1a mx 7-8-2014 female 2012 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 322.20.0 NA NA 2 2 NA NA 1 1 2 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.9314691 4.7860056 5.8234819 11.7220241 -1.4619585 8.5906466 -0.4619585 7.9432198 11.0069572 10.9293222 9.4145956 6.4569425 8.1454090 8.6479092 6.4207216 8.1980747 10.3526611 9.8378591 5.6361112 NA 11.8618371 11.0143185 13.6681262 12.7418090 8.6308357 10.7282119 4.2659994 9.1891302 -1.4619585 2.1230371 5.5380787 9.4922748 12.4820585 8.5783682 12.6243807 12.7000765 10.1093572 7.8464175 3.3960636 5.9217838 7.9995581 9.1674352 6.3062622 12.1612742 1.5807244 10.6583165 14.3308181 3.4449718 10.2594470 10.3933364 7.6750700 9.1962901 2.2385117 14.6992107 10.9413570 1.8600093 7.9022135 NA 2.9975092 8.8611334 8.8130391 9.2463002 8.9163733 7.7883771 10.0675091 2.3454248 9.6034947 10.3851359 9.2245791 6.6928972 1.8600093 11.0633547 13.9311673 7.0962313 9.7291379 9.3851359 7.5067455 2.1230371 6.3259818 7.7204727 7.0138117 10.3149228 NA 5.5824717 7.1927150 10.3161557 10.2570395 4.8234793 3.2385117 3.2385117 8.4614062 12.1042516 7.9217826 13.6452548 6.7907447 6.7279028 11.5625257 12.6299272 12.0010920 9.2428468 10.8381451 10.0950636 10.0945847 9.4038118 1.8600093 10.4535846 10.9142040 11.8395748 -0.4619585 9.7572471 7.7054969 0.5380415 5.2105058 7.7328356 10.5110584 9.2007471 8.0849731 15.4436066 10.0178589 8.3062632 8.0984117 0.1230040 15.8155113 8.8577506 12.7104280 9.8851463 9.6628462 9.9805038 6.3194391 10.3276571 0.0201720 0.4015700 0.4015700 0.0184060 0.0142000 0.0267640 0.0236750 0.0072028 -0.8876000 0.0142990 0.0142990 0.0142990 -0.0043236 -0.0043236 0.0088611 3.6569000 -0.9330600 0.0024661 1.1015000 -0.3898700 0.0070517 -0.4077400 -0.1061600 -0.1061600 -0.1061600 -0.0915110 -0.0915110 -0.0825650 -0.1542900 -0.0569920 0.0201720 -0.0293410 0.0176060 0.0267640 0.0369040 0.0236750 0.0236750 0.0072028 -0.8876000 -0.8990300 -0.0032256 0.0109510 0.0142990 0.0073300 -0.0126780 -0.0126780 -0.0126780 -0.0043236 -0.0243490 0.0088611 -0.9175700 0.0024661 0.3951100 0.3951100 -0.3898700 0.0070517 -0.0145340 -0.0313890 -0.1061600 -0.1061600 0.0076083 -0.0915110 -0.0825650 -0.1542900 -0.0076408 -0.0622560 0.000 0.000 -0.866 -0.866 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4864457 13.8884999 8.0596792 9.5260532 2.7420709 10.8144939 3.8600093 -1.4619585 9.7960557 7.6439875 1.5380911 6.4980801 3.2929731 10.5594057 9.7029856 6.8509619 6.6928972 8.3534618 7.2069635 12.1301852 9.5099598 5.6041692 9.5031414 0.5380415 10.3681976 10.0675091 1.9975092 3.0616380 10.7217140 3.9643432 12.8545016 12.2384099 7.0339339 8.6400544 10.1188082 10.2803880 1.7080106 NA 0.1230040 3.2929731 10.4041984 10.1131450 9.6347938 3.8234844 7.7326382 9.3757065 10.7644908 3.1230371 9.8560565 -1.4619585 10.1823855 1.1230702 3.1819294 9.5048508 8.3517476 4.3960567 9.4184274 6.5987746 10.1211614 3.2385117 14.6342790 NA 11.5216067 -0.4619585 7.2069635 3.6673585 7.5437031 10.0601697 14.799610 7.174703 8.578368 12.624381 10.167435 10.743566 12.161274 11.000581 8.544166 9.706124 12.623053 10.612555 7.013812 9.742650 5.814202 7.037925 10.111726 10.5278279 6.1003217 8.8430002 9.1435582 8.7692997 9.7006398 5.0772387 10.1065098 12.7418090 8.8257910 0.8599695 4.2385194 8.6855888 7.4022651 8.9022132 8.8894927 10.8249251 6.2385175 4.4922762 9.2463002 11.2029703 8.2912955 8.8812642 9.9495896 5.4805915 NA 8.2355677 7.8395748 5.9303967 10.2570395 5.3582591 10.6773102 8.4614062 7.3227132 14.5110584 11.1850873 8.8768150 11.8088119 11.2193170 8.4922750 0.5380415 TCGA-OL-A66P 75 0 NA 428 breast stage iia t2 n0 mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 322.22.0 NA NA 2 5 NA NA 2 6 1 2 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.3975900 6.5801983 5.0795019 12.0052004 NA 8.7609291 NA 8.0366676 10.1533606 10.4159394 8.2630072 6.9427678 7.1973406 10.5438108 5.9678580 9.5761241 9.4526930 9.6923332 7.4318060 6.0006491 11.2739465 11.4960994 12.6751384 10.5936934 8.4106116 10.0036847 8.9637070 9.1542718 NA 1.1098954 8.4761998 9.9709645 12.5064824 7.9553674 14.0406150 10.8428929 11.0947708 5.5910031 0.5248661 7.0167682 8.5583381 6.5801983 6.0006491 11.1898068 0.5248661 11.8524678 9.6373547 3.1098787 10.6309938 10.1732728 8.6822622 6.5249146 1.1098954 16.2315195 13.8359006 0.5248661 9.0087309 NA 8.3921938 8.8625369 9.0756618 9.2697490 9.0890646 9.6784672 10.1423825 5.1396250 8.9986209 9.6268908 6.2931001 8.3354868 2.6948356 7.2322741 14.0509252 5.5386002 9.5610888 9.2731079 8.9385431 4.0484803 5.5249162 6.6644658 7.7147394 11.6170115 -0.4751339 5.9343065 7.0327103 9.1884731 10.0445514 5.7343682 7.4257815 5.5249162 8.8977801 11.2926858 2.1098620 13.6142001 4.6123761 5.6541978 10.8269828 13.5201523 12.0398757 8.1651603 10.1478821 9.9647460 9.2897868 9.0795040 2.1098620 10.3160780 11.5514385 7.1023442 -0.4751339 10.3354867 8.2218829 0.5248661 1.8468343 8.3641189 10.1220366 8.8241231 9.1173722 15.3370172 10.1359400 8.2764590 6.0947702 3.1098787 14.7621624 6.3704049 12.7430242 12.8208275 8.4674295 9.4541734 6.0484782 9.0776802 -0.00318590 -0.00318590 -0.00304750 -0.00719580 0.49147000 -0.00482630 -0.02785900 -0.01354300 -0.01138900 -0.05199100 -0.05199100 0.26263000 -0.00152430 -0.07294200 0.00471900 -0.00360110 -0.14734000 0.01530800 0.01530800 -0.00937180 -0.00069303 0.00152810 -0.07320900 -0.07320900 0.51194000 0.05651300 0.05651300 0.05651300 0.50516000 0.00850430 -0.00318590 -0.01450300 0.04533300 0.00513590 -0.00277070 -0.02785900 -0.02785900 -0.01354300 -0.01138900 -0.10026000 -0.00954260 -0.26300000 -0.26232000 -0.25636000 -0.50339000 -0.18484000 -0.18484000 -0.10954000 0.06823000 0.00471900 -0.18345000 0.01530800 0.00633270 0.05622800 -0.00595220 0.01502800 0.00708260 -0.33595000 -0.07320900 -0.07320900 0.00569190 0.05651300 0.05651300 -0.01312700 -0.00802440 -0.00055444 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.332 0.000 -0.262 -0.038 -0.185 -0.185 0.000 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.332 0.000 -0.262 -0.038 -0.185 -0.185 0.000 10.5220946 13.1953501 2.1098620 9.4512111 4.3322711 10.5943649 5.2798018 2.5249162 9.9385431 9.1117549 NA 6.3952805 4.0484803 10.7471062 9.4718213 3.6948356 7.8603055 8.3482824 12.7155115 14.0205203 9.8733224 6.0795040 10.8802662 2.8468343 6.1396250 10.1423825 4.7343682 NA 11.0401222 0.5248661 13.0598259 13.2194907 8.2798028 9.9118554 8.9129324 11.0455338 3.4318101 3.1098787 NA 2.3322783 10.4144191 12.1975614 9.2964046 3.9172312 8.0968574 10.9688946 10.5213886 6.9843467 10.2008721 -0.4751339 10.0396292 3.5249162 4.1098787 9.9997770 6.4989848 9.9183056 9.7952104 9.9257946 14.2144764 2.9843524 14.3499733 1.1098954 12.0828574 NA 8.1795514 5.0484760 7.5638339 10.2348605 11.520753 7.389101 9.004695 14.040615 10.119240 11.022268 11.189807 8.596378 8.455711 9.584260 13.053858 10.569992 7.714739 8.482017 2.524916 8.090969 9.371972 10.001661 3.524916 9.225355 7.796378 6.547283 9.247842 8.519269 8.367265 10.593693 7.395280 4.654201 3.772846 7.522716 8.930057 10.810317 7.873643 11.606066 3.612376 9.581553 9.269749 10.571357 8.971998 9.724588 9.707309 5.864766 6.048478 9.630706 7.612378 10.684156 10.044551 5.674661 10.723974 8.897780 7.389101 14.326419 10.995574 10.037656 11.252836 10.994048 9.066012 5.828695 TCGA-OL-A6VO 43 0 NA 858 breast stage ia t1c n0 mx 2-10-2014 female 2012 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 338.18.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.62961594 6.18720755 6.23301180 10.92375748 -1.57432586 10.41043068 -1.57432586 8.65447492 11.44455185 9.58993460 9.09719729 10.77825146 8.29138945 9.63510954 6.87686683 7.05136558 9.38999716 10.71481063 8.32803129 4.25854907 11.26052230 11.90720345 12.99248328 10.86288814 9.47346183 10.22776863 5.59558124 10.96238186 7.46457516 3.59558720 6.71105845 8.94332565 12.49653188 7.30217280 12.12891099 11.60820579 8.21844651 9.04862310 6.52368897 7.32652297 7.64240194 8.09099206 6.92550222 5.34451962 NA 11.13904274 5.18054573 10.35934689 10.49687055 11.26781012 7.15357635 7.68068513 0.01063664 14.25211238 8.17384900 1.74760223 9.99171032 -1.57432586 4.12609733 8.17384900 9.90240240 9.41859455 8.14161825 9.57794104 9.58678820 11.64860206 10.69097827 10.01061873 6.31439926 6.67358328 1.23302906 13.75233150 15.08212301 8.43094382 11.18637619 10.80340901 11.24203997 1.23302906 NA 9.49107243 9.56903950 9.84139798 0.42567414 3.55494488 7.25220464 11.94184872 9.67713857 4.33255041 5.53417991 4.35639034 8.25696346 11.94676587 1.59559914 13.39035811 4.85191891 7.34749736 9.62348721 11.07648361 12.30188540 7.12956019 11.92213558 10.92076178 10.65140900 10.85506296 3.85191891 8.49845872 12.02382510 9.51709160 -1.57432586 9.86184730 9.96481505 12.05592337 3.50802292 9.36817074 12.32142084 9.83186125 8.25379266 14.38963603 10.55461724 10.03483500 6.64965857 -0.57432586 11.04999479 6.57031416 12.39477291 10.11957873 9.51576862 10.01577547 7.03298682 10.74918109 0.3772600 1.1861000 0.8796600 -0.1533600 0.3991200 0.1946600 0.0048579 2.8878000 -0.1179600 -0.0579240 0.8794600 1.1870000 1.4240000 -0.1899900 0.1240400 -0.0091286 -0.0091286 0.0000000 -0.2815600 0.0080567 -0.1468200 0.1342100 0.2519100 0.2519100 0.2519100 -0.2213300 -0.2213300 -0.2282900 -0.3232100 0.3307600 0.3772600 -0.2142900 -0.1533600 -0.1827000 -0.6454600 -0.3847000 -0.3976200 0.1210800 2.0558000 -0.1806800 0.2595800 0.3873300 0.1506900 1.3945000 1.3945000 0.0000000 0.0158660 -0.1899900 -0.1899900 -0.2604700 -0.3207700 0.0522410 -0.2815600 -0.3212400 0.0080567 -0.1300300 -0.1755000 -0.7590000 0.2519100 0.2519100 -0.1883600 -0.2213300 -0.2213300 -0.3540400 -0.0637030 -0.2080900 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.523 0.523 -0.280 -0.280 0.000 -0.208 0.293 -0.169 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.523 0.523 -0.280 -0.280 0.000 -0.208 0.293 -0.169 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 7.20044354 12.62494518 1.42567414 9.51112880 3.90591885 11.41540551 2.33253609 -0.57432586 10.05090840 9.65807721 4.81797621 7.48683824 0.74760223 10.65507593 9.16374854 4.94921741 7.11215694 10.10513629 5.74758343 9.93740884 9.27710859 6.28363661 10.40722357 2.33253609 9.84034143 9.58678820 2.01063664 NA 10.57381502 3.12609733 12.41336438 13.02527856 6.40293701 9.85767610 11.90037619 9.92997869 7.05501340 1.42567414 0.01063664 2.81797110 9.59495492 9.72429163 8.72486442 5.39144123 6.60427152 7.69009857 11.21518988 4.47004873 10.45321671 4.99551165 12.19632014 2.74758075 5.30829898 10.73604180 6.97193320 3.71105432 8.44385650 7.57286087 5.89326269 2.01063664 13.24093947 -1.57432586 10.95019799 5.99551165 10.07131473 3.06951314 8.07850096 7.64482463 7.779708 7.995512 8.105136 12.128911 10.064997 11.234017 5.344520 11.853755 9.400537 10.522042 13.043411 12.904679 9.569039 9.323502 5.774384 8.421423 10.850085 10.8799555 7.7632781 9.0980816 9.5530058 9.7776996 10.3912818 5.5754031 4.5341799 10.8628881 11.9984749 2.4256473 9.1788730 8.8395909 11.4618298 11.7065720 8.1838795 9.9467659 5.6830451 5.3681712 9.4185946 10.0394458 11.4388044 11.3361116 10.6363276 8.4535624 NA 9.3929113 5.4809372 5.4480254 9.6771386 10.2875186 11.3291239 8.2569635 8.5119519 14.0981645 11.1508094 10.3512107 14.0822487 11.6864288 9.7425035 0.7476022 TCGA-OL-A6VQ 49 0 NA 600 breast stage iia t2 n0 mx 2-10-2014 female 2012 NA NA infiltrating lobular carcinoma yes 0 white not hispanic or latino 379.6.0 NA NA 2 NA NA NA NA NA 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.00069303 0.85906000 0.87488000 0.00263570 0.00263570 -0.00032880 0.03087300 0.00069327 -0.34939000 0.00124810 0.00124810 0.00124810 0.01008300 0.01008300 0.00471900 0.00471900 0.00471900 -0.00832410 -0.00929420 0.00221930 0.00346870 0.01237600 0.00485790 0.00485790 0.00485790 -0.01009400 -0.01009400 -0.01009400 0.01502800 -0.00069303 -0.00069303 -0.00373950 0.00263570 0.01530800 -0.00032880 -0.00180140 -0.00180140 0.00069327 -0.34939000 -0.34939000 0.00000000 0.00000000 0.00124810 0.00917050 0.00917050 0.00917050 0.00917050 0.01008300 0.03228100 0.00471900 0.00471900 -0.00832410 -0.00929420 -0.00929420 0.00221930 0.00346870 0.01237600 -0.55497000 0.00485790 0.00485790 -0.51311000 -0.01009400 -0.01009400 0.01502800 -0.17348000 -0.53398000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-PL-A8LV 54 0 NA 7 breast stage iiib t4 n0 m0 2-10-2014 female 2013 NA yes medullary carcinoma yes NA black or african american not hispanic or latino 379.6.0 NA NA 4 NA NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1584706 4.1929753 6.4930981 12.1928340 NA 9.4475311 -0.1289449 8.4446940 11.3869930 8.7429521 9.8583108 7.8568886 9.5185052 10.2719262 5.1189743 8.4332892 10.8920267 10.1130299 8.1284347 5.3946102 12.2324423 13.4543647 12.2655095 11.2338125 9.0521990 9.9371360 7.3588868 10.3985237 6.1284336 3.3946102 8.0902151 11.3396708 12.8718390 9.5636623 11.9037813 12.6549658 10.2158974 6.1656668 4.1929753 5.5575479 8.6800110 5.9690791 6.3946085 7.6524062 -1.1291027 12.0142705 8.0207939 8.3406887 9.7604671 11.0823267 4.0805042 5.9371348 -0.1289449 14.5524450 11.4604638 2.3304724 6.5220981 1.4560176 6.6057565 10.0271299 9.5381583 8.4560094 9.2395532 9.0067561 10.1941016 2.1929832 11.3439914 11.4210720 6.9425086 7.0853662 -1.1291027 8.4004773 14.9223195 9.2048394 9.9051579 9.7605508 9.0938417 4.7039368 3.1189743 8.7928876 8.4820714 9.6840262 NA 6.2633650 7.7290279 10.3442452 10.1016677 6.5076710 6.0707199 6.8252425 8.1748273 11.9628127 -1.1291027 13.6937172 4.7290252 6.4709598 11.3999892 15.6305969 12.0030644 7.4967555 10.3035886 10.6687083 10.4038459 11.4972121 4.3113360 7.6458335 11.6156704 11.6973967 5.5292587 10.3763621 9.4351962 5.6654638 3.9619011 10.0334381 10.6458339 11.0381513 8.7398694 14.7233324 10.3798319 9.6784017 8.8568886 0.8710551 12.6554771 6.9208959 13.4715405 11.4065652 10.1483342 11.0334381 6.8425905 10.1953173 -0.132490 0.870930 0.870930 0.064251 0.495140 -0.329930 -0.534370 0.884360 -0.114800 0.603080 0.603080 1.638900 0.600840 0.157530 -0.315620 -0.509990 -0.509990 -0.340770 0.042333 1.258500 -0.104050 0.481340 -0.391390 0.038938 0.024854 -0.393420 0.643260 0.643260 -0.380530 0.442770 -0.132490 -0.790580 0.064251 -0.430410 -0.331870 -0.507980 -0.469390 0.058535 -0.114800 -0.139700 -0.361370 1.009300 1.811700 -0.303790 1.165000 1.165000 1.165000 -0.247370 -0.247370 -0.410440 -0.521460 0.520160 0.000000 0.000000 -0.496720 0.297240 0.110790 -0.381770 -0.391390 0.024854 -0.316550 -0.424710 0.643260 0.485470 -0.425360 0.265800 0.586 0.586 -0.326 -0.510 -0.316 -0.316 -0.497 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 -0.115 -0.115 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 0.586 0.586 -0.326 -0.510 -0.316 -0.316 -0.497 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 -0.115 -0.115 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 9.1401736 13.1285819 4.8017847 8.9703947 5.9690791 10.6605804 4.5989666 1.6783875 10.1736858 10.7110379 6.1189743 7.5505267 4.5989666 10.0271299 9.4606979 5.8483275 8.9072203 10.5745178 5.8483275 9.5505269 9.0776460 7.6259345 10.3098386 2.8710551 9.1331417 10.1941016 3.8710452 -1.1291027 11.1343160 4.3628977 12.5025649 12.8526141 7.3263738 9.2719261 8.4875957 10.6036382 3.4560044 1.4560176 0.8710551 2.0409625 8.0334379 10.0233316 9.8418717 1.8710551 9.4214665 8.6589494 9.8339429 3.8252463 9.4728175 -1.1291027 11.0515776 2.9585086 4.1929753 10.4466002 6.0095756 8.0182519 9.0890044 7.4140789 10.5792685 0.8710551 13.7506779 NA 10.3723864 -1.1291027 8.4160113 5.4560077 7.8878548 7.4371012 10.259570 9.416011 8.070719 11.903781 11.031549 11.440902 7.652406 11.781127 8.265510 9.646657 13.672401 11.376858 8.482071 8.792888 2.192983 7.836831 9.794374 11.302806 4.485755 8.496756 9.045973 9.392559 10.113292 7.588723 6.652406 11.233813 12.679106 -1.129103 7.334571 9.113673 11.760551 10.819049 8.625015 9.943179 7.518505 8.911337 8.456009 10.693618 12.381193 12.731649 11.634674 7.668708 NA 9.480595 6.645307 9.310878 10.101668 5.765864 12.039521 8.174827 7.334776 14.126075 10.893068 9.856889 11.701760 10.994522 10.404377 3.330472 TCGA-PL-A8LX 35 0 NA 5 breast stage iv t4 n1a m1 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 379.6.0 NA NA 1 NA NA NA 1 4 3 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.2481662 2.2916036 7.8122999 12.3034546 -0.1677986 8.6697882 1.6395100 9.1842039 11.6358879 10.1082848 10.2088285 7.7834449 8.5481225 10.1747906 6.9819074 8.6776506 11.4369453 9.2813090 6.1267809 -1.1677986 10.6057117 10.1930074 13.1523968 11.3982144 8.4992719 10.5028167 4.0800863 9.7928864 1.4171099 -1.1677986 6.6265764 11.5438274 13.6639624 9.7899879 13.4698607 12.3567021 11.1322269 7.0219849 4.0416110 6.8710797 7.5221586 7.6523395 4.8321609 14.0397849 NA 10.6044749 15.1932132 -1.1677986 10.5151550 10.0585726 6.3944027 7.5702527 -1.1677986 15.2220313 8.5116404 -1.1677986 7.5498370 NA 4.3867489 10.0818665 9.1495731 10.6583116 7.8349754 9.5828674 9.5710971 1.6395100 11.2058413 10.2874876 7.8628276 8.7584564 1.1540647 6.5937123 14.3763702 8.5695093 11.6813700 10.3625668 6.6776506 -1.1677986 NA 7.2751039 8.5326002 8.9729901 NA 5.7025246 8.6713641 10.4339312 10.0705651 3.0020904 4.0020814 3.9614474 9.4903720 11.3912984 5.5326006 13.6102889 7.5291275 7.2542255 10.5330336 8.1563410 12.3139598 8.9857125 10.7405530 10.2217918 10.2739478 10.5995173 4.5870469 8.9511014 11.1287898 12.9861873 1.6395100 10.6756889 8.8655833 2.1540971 3.8796078 8.6019984 11.4562704 9.9315081 8.6362915 15.6812478 11.1899873 8.7717397 6.7086770 -0.1677986 15.2555882 7.2028477 10.0871890 10.5740487 10.8307508 9.5986894 7.8208453 10.8393874 -0.3627300 0.0259440 0.0286140 0.0132050 0.0081876 -0.3637500 0.7269600 0.0134840 0.0165570 0.0325550 0.0296430 0.0296430 -0.3621600 -0.7339000 -0.0364100 1.2616000 -0.7362600 0.0122280 0.0122280 0.0101370 -0.2440000 0.7309300 0.0030439 0.0030439 0.0030439 -0.3650000 -0.3650000 -0.3650000 0.4186400 -0.3627300 -0.3627300 -0.3424000 0.0132050 -0.3637500 -0.3613700 -0.2393300 -0.2393300 0.0134840 0.0165570 0.0165570 0.1017500 0.1064200 0.0325550 0.0000000 0.0000000 0.0058775 0.0058775 -0.7339000 -0.7339000 -0.0364100 -0.7451200 0.0122280 0.0122280 0.0122280 0.0101370 -0.7405800 0.7137600 0.0099980 0.0030439 0.0030439 -0.3667000 -1.2929000 -0.3650000 -0.3933100 -0.3735900 -0.7562500 -0.734 -0.734 -0.695 -0.695 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.482 -0.239 0.000 0.000 0.100 0.100 0.000 0.000 0.000 0.000 -0.162 -0.734 -0.734 -0.695 -0.695 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.482 -0.239 0.000 0.000 0.100 0.100 0.000 0.000 0.000 0.000 -0.162 8.3439132 10.9768186 4.7390488 9.6435352 3.3557211 12.2380996 -0.1677986 NA 8.7834452 6.9354480 NA 5.5971646 -1.1677986 10.1387918 9.0693703 3.8765562 4.3867489 10.4701437 11.5903836 11.8586838 9.3506561 7.3399551 11.7869020 4.0910566 10.4908182 9.5710971 2.8321609 0.4171639 11.8222644 4.4171234 12.2964509 12.1116259 7.7863565 9.6721515 8.8545281 9.5472643 0.4171639 2.9196261 -1.1677986 5.5186610 9.2500129 9.2394281 8.9780926 0.8321204 9.4899880 9.7621584 10.4385657 4.1540890 9.6085934 NA 12.0134680 1.1540647 9.2137033 10.1995970 6.5362021 -1.1677986 9.2104553 8.0729515 11.7759572 -0.1677986 14.0154081 NA 11.6298219 NA 7.5532599 7.0800884 7.1540890 10.1042069 15.482489 5.504585 8.549837 13.469861 10.471953 10.958219 14.039785 14.966186 8.605151 10.408645 12.280277 10.677650 8.532600 7.699439 -1.167799 7.457869 10.631037 11.0992396 7.1540890 8.1808888 9.3109299 7.9301927 10.4533835 6.8377843 9.5369287 11.3982144 9.0367316 7.9562815 4.5045886 6.6991921 8.9022813 10.2212540 7.9554285 9.5753118 9.1630773 3.2244725 10.6583116 9.7132743 14.8480110 9.2169442 10.9079738 8.0269173 0.4171639 9.1353248 4.9597933 1.1540647 10.0705651 4.1175621 11.6024113 9.4903720 6.6010071 13.3908896 10.7247032 9.2584252 12.8042427 8.4095891 9.7239442 -0.1677986 TCGA-PL-A8LY 30 0 NA 8 breast stage iib t3 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.5255219 4.3004459 6.5651508 11.2199738 NA 9.0730377 -0.8695962 8.8770378 11.3221995 10.0306354 9.2520568 7.2700748 8.9634134 10.3085657 7.6383179 9.1106629 9.6481927 9.7489088 8.0070402 5.2390466 11.2668737 11.3923245 13.5664540 10.9065451 9.7967473 10.5356649 5.8854109 9.7842641 -0.8695962 3.4524505 6.7525747 12.8031697 13.1375506 8.5651516 13.1001797 11.8029487 10.7433919 8.9410949 5.0847191 7.8516223 9.3411948 10.4268660 9.2751817 11.6889441 1.7154981 10.7088961 13.2721516 7.8344268 10.0292985 10.5131474 7.5142280 3.5228467 NA 13.8114301 11.4894493 2.8309651 9.2840754 NA 1.9378717 9.4124534 8.9665738 9.7851593 10.4297313 9.2206359 10.5776066 1.9378717 10.3623445 10.1480278 6.8987078 6.9184256 8.9760133 10.1459384 14.8437488 6.8293663 10.4043189 10.4941106 7.6927661 3.2179906 2.7154761 8.0847196 8.0583013 12.1912193 NA 2.3004459 7.5858504 10.0501316 11.0512484 9.8904116 5.3004496 3.1305191 9.5217669 12.2106747 2.8309651 13.4408521 6.0847191 6.7887353 11.9081896 12.5214984 12.2316783 9.3772639 11.1905438 10.8361558 10.7548619 10.7243813 3.9378811 9.4388623 11.1680703 11.1598106 NA 10.3701219 8.9554822 2.9378717 4.5915956 9.4880753 11.7987435 9.6143392 8.6402984 14.9009808 10.3073198 8.5609759 7.5734669 5.8719915 15.0459826 10.0560779 13.0341228 12.8677707 10.2719919 10.2481664 7.2073394 9.7762809 0.00210190 0.00210190 0.00293470 0.00279590 -0.00366370 -0.00048237 0.00362900 -0.00025591 -0.00025591 -0.00302630 -0.00302630 0.00585230 -0.00189530 -0.00189530 0.00335060 0.00335060 0.00335060 -0.00482490 0.00057594 0.00099199 0.00047517 0.00237950 -0.00681280 -0.00681280 -0.00681280 -0.00225860 -0.00225860 -0.00979730 -0.00274940 0.00210190 0.00210190 0.00460140 0.00279590 0.00710400 -0.00786500 0.00362900 0.00362900 -0.00025591 -0.00025591 -0.00025591 -0.01142000 -0.00620730 -0.00302630 -0.00122600 -0.00122600 -0.00122600 -0.00122600 0.00376790 0.00000000 0.00654760 0.00085329 -0.00482490 -0.00024568 -0.00024568 0.00099199 0.00196310 0.00237950 0.00418460 -0.01396200 -0.00681280 -0.00053311 -0.00225860 -0.00979730 -0.00274940 -0.00025591 -0.00427160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.1694425 11.8393917 6.2802697 10.5483758 3.4646683 10.9582630 2.1305356 2.5899552 9.5271282 10.9237202 2.8309651 6.1305232 4.9634140 9.9978022 9.3736974 3.0374174 5.7304362 10.0200274 9.7516595 11.1925695 9.4386690 6.8787168 11.5233774 1.7154981 9.5196168 10.5776066 7.7958591 NA 10.6467158 4.7154871 14.3885372 12.6048631 6.9507029 9.9159759 8.5163859 9.8753573 3.8309651 NA NA 1.4524373 9.6521238 10.3369273 8.9135216 4.5899552 8.9737378 7.4524513 10.6398036 4.6540861 10.0471493 4.7154871 12.2181520 0.7154541 5.3004496 10.0642435 7.6262982 4.9634140 9.1163653 6.7079527 8.0847196 1.1305356 15.1607594 NA 11.0861733 NA 8.3855518 7.2903949 7.5776063 8.8361558 13.161739 6.290395 8.652124 13.100180 10.279635 10.661417 11.688944 11.455548 9.397310 10.029125 12.314934 12.725781 8.058301 7.988505 3.589955 7.788735 9.808243 10.984613 5.700379 8.728576 9.477037 8.023734 9.834228 6.470374 6.359342 10.906545 5.589955 5.589955 10.905310 7.918197 12.000888 10.138251 8.983833 10.306697 7.013166 5.802948 9.785159 10.519617 10.836588 10.091973 10.589443 7.763518 NA 9.553828 6.300448 7.158429 11.051248 3.037417 11.076699 9.521767 6.715486 15.618803 10.377264 10.604229 12.489724 10.796747 9.187161 3.589955 TCGA-PL-A8LZ 29 0 NA 120 breast stage iiib t4b n2 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes NA black or african american not hispanic or latino 372.12.0 NA NA 4 1 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.9095642 6.7780377 6.6972248 10.9876425 -1.2276920 9.8711030 NA 9.3751118 11.4645925 10.4306244 9.9119643 7.7752277 8.4554074 10.3125410 8.2821877 9.8478920 8.7367537 10.4930847 9.1452780 5.4306232 10.9757609 10.9882493 11.6894120 10.3488973 9.9061973 10.4017695 7.9745368 11.7116248 1.3573831 1.7723924 8.6823061 11.4263776 13.0880578 6.9523219 10.6155488 10.6894120 10.8887569 6.1986768 2.5797594 7.5861943 8.9272310 9.2359374 7.7001907 7.4448385 -1.2276920 10.6577280 10.5586825 8.3308335 9.7840806 10.3531426 8.3667375 5.3270011 1.7723924 16.2798294 12.5087705 -0.2275231 8.4518931 NA 5.9818663 10.0042341 9.5773506 9.0238954 9.2682681 9.5045803 10.0173713 2.3573831 10.8548946 10.9591462 4.2642662 8.9891589 -0.2275231 4.9818663 14.5878213 8.3954532 10.7546935 10.0960307 10.1839239 -0.2275231 NA 8.4900895 10.3403690 11.5859937 NA 4.7266078 7.9170713 10.4248098 9.8276954 5.6053017 7.3193072 6.8598764 9.7989364 11.6685561 3.8168045 13.0867837 3.5272956 6.2881130 10.9373199 11.8353023 12.4986311 7.3834373 10.6210359 10.1609685 10.1885560 10.6131909 5.2153563 8.4198713 11.5893966 8.1277638 -0.2275231 10.7829411 8.9879458 2.8598702 3.9053990 9.7215101 11.3632338 9.7589660 8.9843011 15.1972025 10.9529437 9.3403691 5.4448393 3.7724136 12.5915941 7.4054078 13.2608807 11.7845136 9.7759309 9.8763564 8.3250819 10.7282662 0.125450 0.983010 0.394080 -0.033035 1.394000 -0.015257 -0.042865 0.127750 0.218420 -0.040248 -0.040248 0.484010 0.904350 -0.046560 0.456440 0.385710 0.385710 -0.035488 -0.035488 -0.062643 -0.036713 -0.058796 -0.067630 -0.067630 0.423300 0.297190 0.297190 0.297190 0.163200 0.153360 0.125450 0.061609 -0.033035 -0.334520 -0.016837 -0.101030 -0.101030 0.127750 0.228410 -0.298660 0.212800 0.090533 -0.040248 0.771510 0.771510 -0.047434 -0.061494 -0.046560 -0.092912 0.365540 0.420280 -0.035488 -0.035488 0.431370 -0.033717 -0.036713 -0.047299 0.417260 -0.067630 -0.067630 -0.176300 -0.109890 0.297190 0.388440 -0.034398 -0.344250 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.403 0.403 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.270 0.000 0.000 0.000 0.227 0.227 0.000 0.000 0.000 0.000 0.772 0.000 0.134 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.403 0.403 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.270 0.000 0.000 0.000 0.227 0.227 0.000 0.000 0.000 0.000 0.772 0.000 0.134 8.8874567 13.5751312 3.1647380 9.7738212 3.1647380 11.1926364 4.9622390 4.4728516 8.6702583 10.1100348 2.6793112 7.7539802 2.3573831 11.1321625 10.0824576 1.7723924 8.3592528 11.4364157 7.5668289 9.5430769 9.0572255 7.6210357 12.9367699 3.8168045 8.7090507 10.0173713 3.5797715 NA 10.8508974 2.2318317 12.4320744 12.7725890 8.6365992 9.4875169 12.8069540 9.5676409 2.7724136 3.9818618 -1.2276920 -1.2276920 9.4412980 9.7251542 9.4571615 5.4162689 9.8170188 6.9373197 9.7525526 6.3037935 10.1944776 2.3573831 12.0473734 4.0203422 3.9818618 9.4110480 6.2734543 6.1299650 10.0635837 9.6053030 8.4986310 -0.2275231 12.9153975 1.5797594 11.1097561 NA 9.1923732 6.0012325 8.1711568 7.2602534 11.352358 8.590995 8.064735 10.615549 9.764643 10.896534 7.444838 9.225684 8.973312 10.012608 13.848268 11.207823 10.340369 6.859876 2.579759 8.153956 10.692394 11.277728 4.630394 8.812703 9.199726 8.286140 9.864926 8.688292 6.822261 10.348897 10.972085 4.198675 4.726608 10.309257 11.820048 10.580975 7.530637 9.110035 9.297934 7.901696 9.023895 10.757899 10.251688 11.177820 10.500333 9.126662 NA 10.344483 7.215356 7.974537 9.827695 6.272258 10.800878 9.798936 8.733863 12.792872 10.574525 10.826000 12.659538 11.251688 9.204955 4.472852 TCGA-S3-A6ZF 64 0 NA 502 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 334.18.0 NA NA 1 3 NA NA 1 2 3 4 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.54900792 6.47618076 7.29791313 10.85218186 0.39407507 9.78849437 -1.60603472 10.05268949 11.65009285 11.57238527 10.13254613 7.83074336 8.97993301 9.04328790 5.56395737 9.14138553 9.86723008 9.76362901 7.47351662 3.25200685 10.66636986 9.47950402 13.83188123 11.15973210 9.00690024 10.46045723 5.76907085 11.22315976 0.39407507 4.39403390 8.14557557 10.51264833 12.20891448 6.63720593 12.75837152 13.11277856 9.29414375 4.78635066 -0.60603472 6.27054950 8.44115560 9.49074681 6.90182627 12.63280956 5.35981631 9.58632453 13.53242344 7.47883998 9.57461831 10.73721734 9.33214086 7.55137836 2.78634544 14.53928577 10.29452116 -0.02107222 8.24734130 12.92894241 3.97899182 10.64433004 11.10290000 9.90430134 10.57704667 9.75652347 9.53038195 3.20138294 11.27667468 10.66461901 5.44931375 8.28429573 0.71598120 10.50614530 14.17341757 9.40938393 10.97381896 11.28695384 8.51426944 1.39402017 1.56393907 8.76035370 9.24812089 10.82003429 -0.60603472 4.76907349 7.70009357 11.16758298 10.83593836 5.12195202 6.51297270 5.40525721 10.76308361 12.38750081 3.78634544 12.99051262 7.94477823 8.35258420 11.72186495 13.38284945 12.86335549 9.15724410 10.94646061 10.50059454 9.85192546 10.46079354 4.62284838 8.80129934 11.62959719 11.15308761 NA 10.46314567 9.25356648 0.97900097 4.69488576 9.32032762 9.95722787 9.98882270 9.18600848 15.28291755 10.05536433 9.59063383 8.95722802 1.39402017 15.09064606 7.13886565 11.98356576 10.75515297 9.61138358 8.73388170 8.57145118 10.83825194 0.644690 1.044100 1.050100 1.079500 0.361490 -0.014916 0.000000 0.160400 -0.434420 3.656900 0.362310 1.129400 0.443920 -0.026614 -0.417290 0.652950 1.984000 0.436990 0.436990 0.007500 1.605300 -0.100260 0.054660 0.054660 0.054660 -0.376730 -0.376730 1.046000 1.066300 -0.410490 -0.438970 0.025671 -0.432680 -0.413660 -0.014916 0.000000 0.000000 0.160400 -0.434420 -0.434420 0.521880 0.012097 0.026092 0.399440 0.399440 -0.417180 0.944660 -0.026614 -0.027671 -0.417290 -0.431700 0.436990 0.436990 0.436990 0.007500 -0.402190 -0.100260 -0.398150 -0.400590 0.054660 -0.410030 -0.376730 -0.376730 0.020903 -0.122130 -0.379660 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.439 0.589 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.439 0.589 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 9.20058135 13.13618315 8.06998888 10.71511414 3.85346676 10.89063577 4.86976285 NA 9.30467439 7.55893877 0.71598120 8.14358270 1.39402017 10.66957418 9.38555356 3.91759406 8.11342026 9.61441005 8.11170794 9.78473806 9.14905278 8.60956476 10.48513637 3.14891784 7.76689658 9.53038195 2.91758451 NA 10.33361090 0.97900097 11.57456245 11.61229213 8.15391982 10.03698583 10.57952657 8.76471902 3.67943506 2.30091443 -0.02107222 9.62104579 8.07702611 9.99673051 10.86189188 3.48149270 11.10049743 7.70464445 9.82239174 4.03789173 9.62405208 -0.60603472 10.45574034 3.71595925 3.39403390 10.30990353 4.62573222 5.22692078 9.77773597 7.49469401 7.99951132 1.97900097 13.66279293 0.39407507 10.62465255 -1.60603472 7.21739844 4.76907349 8.72158422 9.25434271 13.142737 6.388386 8.080532 12.758372 9.942054 10.958657 12.632810 11.451685 10.121527 10.976174 13.495474 10.421592 9.248121 9.194123 1.715981 7.520736 12.372742 10.5041887 6.8411152 8.3982520 9.2827750 9.3084169 10.7846010 7.7970435 7.5258888 11.1597321 6.5233142 1.7159812 4.0664595 8.6119528 10.1013907 9.9995112 8.2751458 8.7361063 11.8261820 6.2582174 9.9043013 9.8898866 11.3223650 10.2134124 11.2449998 8.5539030 NA 9.5322266 7.4761808 7.0593672 10.8359384 6.7690708 11.0438738 10.7630836 7.3189034 13.2582662 10.0147097 9.6004355 12.7767907 10.1638695 10.1847873 0.7159812 TCGA-S3-A6ZG 71 0 NA 207 breast stage iib t2 n1 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 1 black or african american not hispanic or latino 334.18.0 NA NA 1 3 NA NA 1 4 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.82520471 5.62267856 7.52591148 11.60241958 -0.09619044 10.55341523 -0.68107584 9.79057234 11.77191046 12.59937791 9.71764078 7.82867220 8.98689554 8.74201295 7.59734643 9.68685783 10.49226190 9.62609795 6.75768869 1.12624604 10.95257353 9.23776040 8.76907746 12.40834760 9.44172519 10.49818424 5.96994939 10.23141225 -0.68107584 6.54289876 8.22127245 10.72190911 12.61874904 6.17064617 12.89662097 13.82882672 8.80271280 7.09697442 5.16438807 5.53806629 8.53564281 10.44107798 6.93728318 13.07566190 1.48882346 10.32592434 13.60823161 5.42742180 9.88127306 11.13767898 6.48380449 5.38498573 -0.68107584 12.85778078 9.66485666 2.31889525 7.28468162 1.12624604 5.06036305 10.11412505 11.26049495 11.11006003 11.67878392 10.25774152 10.02927315 3.93361040 11.08914807 10.60632091 8.61695972 8.75976637 -0.68107584 11.84869367 14.02385443 8.55610710 11.61538319 11.31484089 8.15020424 2.01934609 -0.68107584 8.59385757 8.79766671 11.21504029 -0.68107584 5.69393573 7.34680269 9.31889706 10.15297306 6.98778244 6.06036305 5.48882346 9.79766671 12.46267889 3.71121956 13.34637120 7.68740368 8.29187702 12.53154548 11.92946063 12.97151805 8.26287707 10.01151255 10.71228753 10.92215948 11.04468939 5.99132229 9.06288991 11.90139195 11.35644405 -1.68130717 10.11087398 9.12625198 1.64080600 4.29914939 9.90479852 11.49880618 10.40900953 9.38834691 14.56160604 10.38532274 10.12705684 9.35713035 3.31889525 14.88453474 9.52835057 12.69515820 11.32627487 9.98067528 9.37214419 8.21674246 10.80859461 -0.144380 1.155800 1.022800 -0.135230 -0.137590 0.337880 0.340150 -0.190240 -0.194640 0.339340 0.339340 0.339340 -0.122780 -0.122780 -0.126290 3.656900 -0.642740 0.341770 0.341770 0.235350 0.347130 -0.241310 0.273630 0.273630 0.324570 0.514630 0.277640 0.277640 0.437830 -0.144380 -0.144380 0.000000 -0.137590 0.337880 0.337880 0.340150 0.340150 -0.170310 -0.190240 -0.194640 -0.132900 -0.132900 0.339340 -0.087447 -0.087447 -0.087447 -0.116150 -0.122780 -0.122780 -0.126290 -0.632060 0.341770 0.341770 0.341770 -0.738880 0.347130 -0.244690 -0.649580 0.273630 0.273630 0.265610 0.497530 0.277640 0.437830 -0.635570 -0.122910 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.325 0.325 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.325 0.325 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 8.52956837 12.70388316 5.94094898 9.32241492 4.21928471 10.26653405 1.64080600 -1.68130717 8.37146521 6.63630995 1.48882346 6.45332332 0.64080600 10.04554099 10.02625618 5.07378596 7.31607694 9.61121868 11.15514477 10.24073803 9.74495742 8.03314270 9.73146703 3.17688123 9.69610756 10.02927315 4.76183841 -0.68107584 10.53746032 3.67644796 11.98789287 11.64167029 6.98778244 9.80673714 8.10025707 9.43718945 4.97711045 1.31892416 1.12624604 10.63404667 8.91601856 8.94551875 9.57392567 4.27309063 7.53513382 6.72828789 10.94984677 5.99837831 9.76598038 -0.68107584 11.13027183 5.07378596 3.96275260 9.71394389 5.20885667 6.59035949 8.22879032 8.24073792 8.32030550 1.31892416 13.53602178 -0.09619044 10.23589612 NA 7.81075027 3.96275260 8.00013525 8.67864661 15.322495 5.794632 8.683032 12.896621 10.776278 10.661805 13.075662 12.762359 8.550478 11.101076 13.085219 11.067090 8.797667 9.403041 1.640806 7.384987 11.370786 10.862171 6.753526 8.832625 9.676449 9.648133 10.425676 7.450754 8.831638 12.408348 6.363292 3.318895 6.207641 7.433785 10.660138 10.176489 7.631780 8.410333 12.571119 6.627236 11.110060 10.755348 10.660416 9.738331 10.595022 8.734639 NA 8.974669 5.744576 6.884951 10.152973 6.483804 10.597637 9.797667 7.654421 13.701724 10.331522 9.639698 12.610068 11.107819 10.108023 2.640829 TCGA-S3-A6ZH 29 0 NA 263 breast stage iiic t3 n3a mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 14 black or african american not hispanic or latino 334.18.0 NA NA 1 3 NA NA 1 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.9430011 5.6994517 6.3443563 12.0467311 -0.6668053 10.3028760 NA 9.8625603 11.9530059 11.6727015 10.0905198 7.3075442 8.6651664 10.6837928 3.5425800 9.2034946 10.7027271 10.3057507 6.3992190 3.8566870 10.2811320 9.3985460 16.0112554 12.1557006 8.9330426 11.4948916 5.4726827 10.7176356 -0.6668053 -0.6668053 6.9293200 11.2695837 12.4595923 4.9330438 13.6413622 13.7937777 8.6674032 5.5030561 3.4624188 7.4879477 8.0627504 6.2460185 5.7843417 12.4432052 0.9180809 8.8732580 13.6854147 2.6550541 9.2656029 11.5527521 4.1660164 8.6266016 2.0335816 13.7772958 8.8408651 0.3330802 7.4468724 -1.6670343 3.1911046 9.7976756 10.9344364 9.1332208 12.3935724 9.5340283 9.8881982 2.6550541 11.4247305 11.0977941 7.5105490 9.0055552 1.3331375 11.4509352 14.6027496 6.9795807 10.5541127 11.1255134 6.7081693 0.3330802 0.6550770 7.6482792 9.2527380 10.8739843 -0.6668053 3.1911046 7.4803346 10.5111721 9.0064389 9.1428979 5.9551826 5.0055572 8.4403468 12.0774381 4.4624123 13.5908491 5.9029852 7.5999166 12.8410483 12.5967658 12.9441546 6.9404604 10.8848381 10.6920557 10.7735033 10.7902542 5.8877178 8.8369555 11.3629347 13.3929812 -0.6668053 10.2138612 9.3331299 -1.6670343 3.0357822 9.0327023 10.0636000 9.6086723 8.7956322 15.3899474 10.3955134 9.6707517 7.2188257 1.1405169 16.0612563 10.0104089 12.4169415 10.8982319 10.1481127 9.2400204 8.8189592 10.9159586 -0.301080 1.020800 1.158200 0.098735 0.137050 -0.265860 0.116410 0.090895 -0.734660 -0.763790 3.656900 0.116560 0.074935 -0.769440 0.097717 3.656900 -0.745410 0.090771 0.084961 -0.727630 0.082505 0.042195 0.345380 0.345380 0.345380 -0.490970 0.644000 0.580450 0.019190 -0.422740 -0.301080 -0.381560 -0.753300 -0.300130 -0.265860 0.140460 0.140460 0.090895 -0.734660 -0.759990 0.104850 0.104850 -0.764820 -0.311990 -0.311990 -0.311990 -0.417950 -0.739390 -0.777220 0.097717 -0.761820 0.090771 0.084961 0.084961 -0.727750 0.082505 0.042195 0.755320 -0.836860 0.345380 -0.288550 -0.490970 0.644000 0.021211 0.120670 -0.398630 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.279 -0.279 -0.609 0.137 -0.266 -0.266 0.116 0.116 -0.708 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.279 -0.279 -0.609 0.137 -0.266 -0.266 0.116 0.116 -0.708 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 7.9086688 12.3713629 7.9823861 8.9209072 4.1589186 10.8289849 2.0335816 -1.6670343 9.3911216 6.9877654 NA 6.2814980 2.7254576 10.4588661 9.4765131 5.2989149 7.4854148 9.7869149 9.8319790 12.5538860 9.9073827 9.1332208 9.8857989 2.0335816 9.0222543 9.8881982 3.9478438 NA 10.5380066 2.5030434 11.7554575 12.1277488 6.4364184 8.9404601 7.8915504 10.3778655 2.2400090 1.5030434 NA 2.9181000 8.9805883 8.6651664 9.9469193 2.7925639 8.9038963 6.6729797 10.2115640 5.4726827 10.2981926 NA 9.6668443 1.6550770 2.9769868 10.1905277 6.7990225 3.5810620 7.7467575 6.7425210 6.9841815 0.3330802 13.5350240 0.6550770 11.4146133 NA 5.3665530 3.7254467 8.6127403 7.8991841 15.465318 7.307544 8.750982 13.641362 9.437073 11.129778 12.443205 10.850061 8.851616 10.860362 13.179306 10.362417 9.252738 6.431162 2.420590 8.301797 12.276835 10.6528020 8.5751130 8.8867592 9.2004085 10.2679264 10.5069943 6.3829784 8.7361418 12.1557006 6.3554973 3.1911046 4.0610503 9.2924001 9.4598342 9.4112807 9.4771507 9.1996360 12.9199696 5.0880186 9.1332208 10.5164551 10.6363398 9.5804640 10.3901062 8.9349007 0.9180809 8.7731270 6.8982313 5.4726827 9.0064389 4.4416561 10.2686633 8.4403468 7.7864003 13.0964978 10.2785736 9.7588703 13.0775958 10.6300460 9.2763773 NA TCGA-S3-AA0Z 63 0 NA 322 breast stage iib t2 n1a m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 379.6.0 NA NA 3 NA NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.90573688 6.11273766 7.93228386 11.31832492 -1.54540294 8.93834167 0.03941918 10.27749490 12.27020929 9.68033579 10.43823202 6.61943209 8.87026761 9.66823758 7.04698318 8.92416760 10.72014086 9.74050582 8.36291825 4.58380788 11.29569697 10.29569697 10.86232461 11.23095884 9.03760845 10.19809802 6.43751906 11.14495159 4.23588786 1.03948937 8.71544520 13.73859076 12.74454464 9.19767720 12.65389140 11.99283601 10.94838125 5.23588403 3.20940657 7.06555077 10.04136552 8.05629685 9.91805015 3.66398213 NA 9.91293244 10.43180575 9.19430650 9.95693498 12.37143155 7.86391678 5.02438174 0.77644093 16.08117361 10.38821645 2.84683427 8.62570263 NA 4.89746795 9.89019602 9.93127204 8.40726691 9.49069948 10.07474558 12.50590470 1.91395211 10.48415807 10.87474918 7.23588595 9.08752092 6.31871271 5.30001753 15.32088711 9.18637081 10.99319974 12.34602472 9.70955429 -1.54540294 NA 9.95934475 9.99852429 11.14080747 NA 3.15497199 7.08388243 12.16382503 11.20125004 3.45453126 7.06185611 7.31871181 11.24079545 12.09103714 2.70245808 13.22167570 4.68334275 7.23916028 13.03148246 13.83373491 12.77751017 9.21358180 11.63178957 11.16619278 10.92156323 11.34744802 4.89746795 8.28107412 11.76995844 9.36816332 4.54198558 10.26710420 9.20355723 5.42031059 5.39997085 10.30197465 12.24314217 10.07520382 8.85860302 14.34844348 9.86391678 9.70423186 8.69888972 3.62445187 10.74885935 10.47862656 13.72208060 12.15127603 9.95387341 10.10557751 8.29844662 11.20642547 -0.0069614 2.0784000 2.0784000 -0.0073339 1.4547000 -0.0240830 0.0100060 1.3851000 0.6033900 0.0214630 0.0214630 0.0241100 1.5011000 -0.0052870 0.0182430 0.0182430 0.0182430 -0.0065050 -0.0065050 0.0511030 -0.7898400 0.0000000 -0.0150540 -0.0546860 -0.0289010 3.6569000 -0.0538810 -0.0538810 0.0059927 -0.0295270 -0.0030475 -0.0479440 -0.0073339 -0.0091286 -0.0204120 -0.0026322 -0.0026322 1.3851000 0.6180600 0.6193300 0.7637000 -0.7912600 0.0214630 1.5514000 1.4913000 0.7671500 0.7638800 -0.0052870 -0.0181220 0.0182430 -0.7908800 -0.0065050 -0.0065050 -0.0150540 0.0498240 -0.7898400 0.0190830 -0.8601800 -0.0342230 -0.0546860 -0.0018014 -0.0686630 -0.0538810 -0.8704300 0.7833100 0.0213230 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.799 -0.799 0.783 0.000 0.000 0.000 0.000 1.388 0.000 0.000 0.000 0.000 1.368 0.618 -0.016 -0.780 0.000 0.000 1.491 1.491 0.139 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.799 -0.799 0.783 0.000 0.000 0.000 0.000 1.388 0.000 0.000 0.000 0.000 1.368 0.618 -0.016 -0.780 0.000 0.000 1.491 1.491 0.139 8.5812303 13.4207158 3.4989146 9.3417463 5.5525584 11.5108248 3.9463753 2.8468343 7.5915171 9.9800466 NA 10.1392744 5.5734654 10.1845713 11.3119237 4.9936834 7.2905765 9.2326030 10.9785777 8.8692110 9.6341177 8.4975529 11.2050234 0.4544918 9.2060698 12.5059047 2.0394894 NA 10.0879751 4.8468443 10.6770188 13.0934142 7.0129463 10.1211937 10.1769064 9.2301360 4.0692381 2.6244519 1.0394894 -0.5454029 8.2586570 9.6017307 5.7491454 5.8639162 10.5603427 6.4713338 9.7882402 9.4339509 9.5525579 4.3371687 14.8630877 5.1824460 5.5419887 8.1127371 7.4636829 6.7352961 9.2505654 8.2715092 8.2243635 1.4545444 13.2218309 -1.5454029 9.6143972 NA 5.5734654 4.2094144 8.1756249 7.4375191 12.837974 6.872378 8.229313 12.653891 10.249348 11.242224 3.663982 8.555188 9.406539 10.946880 13.466059 11.923913 9.998524 8.415975 NA 7.709555 10.350101 11.94975625 3.81207716 8.35237144 8.88602331 9.63505656 11.16976281 7.50709373 5.71191334 11.23095884 11.51014716 4.77645146 5.73992909 8.25865695 11.61013465 10.22105465 7.20606979 8.56956932 9.31638812 7.18584475 8.40726691 9.64805121 11.25724410 12.66321740 11.55239331 8.67369421 9.09296164 9.03520847 11.19887613 7.53933410 11.20125004 8.31871181 11.87572279 11.24079545 8.41640952 12.75616487 10.09160345 9.56761675 12.92480336 11.30217046 10.40690301 0.03941918 TCGA-S3-AA10 65 0 NA 241 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 379.6.0 NA NA 4 NA NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.4110324 -1.2331081 4.5740833 11.6524218 -1.2331081 9.5764936 1.0886844 8.8726339 11.6837245 9.4347239 9.3087900 7.1676048 8.6075034 10.3591825 5.3814357 8.7353922 9.1919413 10.5460345 8.6011966 4.9565492 10.7593098 11.5090349 12.3243088 11.1853687 9.6796149 10.4060662 8.9761789 10.0784737 6.5740803 -0.2332776 8.6781173 10.6316854 12.6077984 8.4619537 12.0090064 11.6151528 9.6208146 6.3213148 4.4946460 8.2444837 7.4809711 10.3712786 7.2545657 4.8328141 NA 11.8755766 9.2148417 8.2645772 10.1048936 10.6638146 6.4320608 5.1065745 0.3517414 16.3756497 9.8709901 -1.2331081 9.3498082 NA 6.7382693 9.4132841 10.1887902 8.8124851 9.2148417 9.1428509 10.2834104 2.2261694 8.7382690 11.5107183 4.9164719 6.8804676 2.0886505 7.5578887 15.1929902 9.5663309 10.6645709 10.2449895 10.6855887 2.8541952 NA 8.9761789 9.1374128 9.9509810 -0.2332776 5.0146543 7.3020009 11.1766467 10.6165215 5.4249355 7.8726343 6.1065745 10.2205105 12.1501598 2.2261694 13.2668204 3.4671621 7.9565498 11.4597768 13.1724653 12.8131674 5.8001492 10.9328885 10.8598128 11.0334359 11.6685351 4.8752493 8.6043534 11.5896945 10.1777067 1.7667224 10.4051614 10.4606480 2.3516849 3.1556035 9.1750552 9.5956553 11.3403727 9.1856322 14.8535666 11.1710687 10.3694243 5.5869058 2.2261694 12.5345995 5.9366497 13.0310214 11.9105869 9.5014352 9.5123997 8.0311680 10.5824970 0.7849000 0.9223400 0.2773000 0.0417760 0.2570300 0.7494200 -0.3603100 0.3050900 -0.3323400 0.9879100 0.9879100 1.6594000 1.4517000 0.2669100 -0.0928410 -0.0831670 -0.0831670 0.8229900 0.7668100 1.7511000 -0.3374200 -0.3486700 -0.3392600 0.3337100 0.3753200 0.1639800 0.2526500 0.2526500 0.2790300 0.0297820 0.1010700 0.2070600 -0.3274800 -0.6749700 -0.3518800 -0.3275900 -0.4578700 -0.3246900 -0.3323400 -0.3046000 0.2847300 -0.9710100 -0.4384400 0.0000000 0.0000000 0.0000000 -0.0090577 0.2798300 0.8408500 -0.0632670 -0.0413970 0.8229900 0.2151800 -0.3471900 -0.3495900 -0.3301400 -0.3241100 -0.5587600 -0.3392600 0.3337100 0.2557800 0.1639800 0.2526500 0.2790300 0.2009500 -0.2988300 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 0.000 0.194 -0.347 0.328 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 0.000 0.194 -0.347 0.328 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 9.8334874 13.9396608 1.3516849 9.5529951 5.1855891 11.7132663 6.1154536 -0.2332776 9.3924342 6.7497193 4.5480852 7.1761163 1.5741015 10.5587022 10.1352319 3.0146588 7.1676048 10.7125351 8.3441543 9.2695573 8.2477377 7.1242775 11.0305815 3.8960102 7.6675920 10.2834104 5.3516884 -1.2331081 11.1898414 2.7667224 13.0016925 12.6863337 6.6855884 9.4593410 11.0767701 10.3507484 3.8111216 3.4105853 NA 7.4844016 9.1611881 9.5315971 8.4391506 10.4042560 8.1633729 7.9190105 10.3684962 4.2585792 9.8700133 1.9366662 12.3325416 5.3058830 4.1590398 9.8535118 6.2601800 8.7821405 9.5651973 9.4505974 10.7114375 8.5315971 13.9491586 -0.2332776 10.8581609 -0.2332776 9.4444451 3.9366474 8.0659336 7.7004161 12.117388 9.485258 8.612215 12.009006 10.886315 10.711438 4.832814 11.097362 8.985894 11.278478 13.952840 13.480112 9.137413 7.453226 3.159048 8.453226 10.541513 11.025586 1.766722 8.541513 9.254565 9.699678 10.210736 8.970073 7.188791 11.185369 11.257075 -1.233108 5.875249 8.800520 12.821415 11.274025 8.072787 9.944145 8.361050 9.676619 8.812485 10.131954 11.278725 12.268563 11.182731 9.231271 NA 9.936895 6.666203 9.920278 10.616521 5.508191 11.415083 10.220510 8.584589 14.164927 10.820991 10.330398 13.036291 11.679989 9.296156 3.976180 TCGA-S3-AA11 67 0 NA 169 breast stage iia t2 n0 m0 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 1 1 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.6970988 5.2044733 8.0773616 11.5836951 -0.1705563 9.5616013 NA 9.4560556 11.9482128 10.3237895 10.1575478 8.2472862 8.5976183 9.4542294 6.6107931 9.3272859 11.2845042 9.7370758 6.1240551 -0.1705563 12.9703436 9.6607411 14.2192333 11.1386260 9.0832815 10.7745119 4.1513637 10.4674173 1.4144062 3.5298709 5.7952189 11.3588645 12.8780060 7.1648245 12.9326398 12.8755348 9.5367931 7.7212175 4.6107945 5.7601704 8.6303338 9.8948500 7.6335649 13.9157775 1.1513393 9.1979403 13.6388504 5.0582515 10.0928206 11.0600549 7.6749238 6.5573549 -0.1705563 13.8500090 7.1148365 0.4143521 9.2174513 -1.1707187 2.5298709 9.9451279 10.1703967 10.3122419 11.4599286 10.4256237 10.1692839 -1.1707187 11.4475900 11.1061399 7.9062497 7.6936201 2.2888605 12.3399509 14.7918329 8.9134717 11.4856353 11.0489050 7.6140686 0.8294437 5.8847176 8.9235117 8.3608155 11.5458247 NA 4.1148334 7.0291061 9.0229592 9.5641436 7.5089143 4.0388839 3.4732934 10.0333937 12.3374763 3.8738329 12.7499729 6.0868220 6.8067133 11.6341700 11.7395145 12.8725467 8.2001213 10.9577505 10.5058318 10.3777743 10.8830205 4.7363235 9.1524887 11.1061399 11.9514530 NA 10.5755283 8.3352456 1.6367754 4.6391048 9.9709025 11.0281859 10.3267869 9.2420039 14.7798759 10.4533154 9.2483406 9.9155702 3.2217534 16.1485680 9.2619759 13.1746312 10.8830205 10.6760996 10.0576514 7.9248309 10.8340793 -0.00277070 0.66882000 0.66882000 -0.00325070 -0.02013800 0.00000000 0.00055459 -0.00193990 -0.00679470 0.01810300 0.01810300 0.01810300 0.00000000 0.00000000 0.00499690 0.00499690 0.00499690 -0.00346270 -0.00346270 -0.00097017 0.00013863 -0.00207840 0.01480300 0.01480300 0.01480300 -0.00899060 -0.00899060 -0.00899060 0.00124810 -0.00277070 -0.00277070 0.03733900 -0.65919000 -0.00678700 -0.00044888 0.00055459 0.00055459 -0.00193990 -0.00193990 0.00638710 -0.00083160 0.00124810 0.01810300 -0.00207840 -0.00207840 -0.00207840 -0.00207840 -0.79779000 0.01880300 0.00499690 -0.07808000 -0.00346270 -0.00304750 0.00263570 -0.01031700 -0.00270620 -0.00207840 -0.00138580 -0.01836600 0.01480300 0.00221930 -0.00899060 -0.00899060 0.00124810 -0.00636680 -0.01202400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1715086 12.5068233 6.8067133 9.9600045 2.5779001 11.3277845 2.2888605 -0.1705563 9.0546415 7.0678387 NA 5.7952189 4.2217534 10.1831321 10.0455735 2.1513718 6.9740922 9.2238967 10.5423908 10.5441088 10.0823536 7.8434544 10.0968059 1.1513393 8.5624493 10.1692839 3.1513555 -1.1707187 10.6448172 5.3992907 12.2028429 11.8801329 6.9274663 9.6543928 10.0080987 9.4714856 5.4587921 0.8294437 -1.1707187 6.7952189 8.6383983 9.7858101 10.2201403 2.2888605 9.9107509 7.1423164 10.4818308 5.7120757 9.6222243 NA 10.8181186 4.3529986 4.7601730 9.6658394 5.8172088 3.0773626 8.8860718 6.3212878 5.3051680 -0.1705563 13.3276599 -0.1705563 10.8717774 NA 8.8166979 4.7120785 7.5843214 9.0376683 13.443101 5.989305 8.434913 12.932640 10.598032 10.365681 13.915778 12.183959 9.672515 10.531174 12.548716 9.688969 8.360815 8.464245 4.829434 7.191378 11.244383 11.468322 8.288866 8.758692 8.923512 8.098561 10.904458 5.337229 10.435839 11.138626 6.297039 1.999351 7.325289 8.599899 10.276000 10.210436 7.900896 9.498319 10.456056 3.584325 10.312242 10.400238 11.469453 9.585990 10.582651 8.585990 9.976003 9.940687 6.698442 4.384022 9.564144 6.038888 11.436070 10.033394 7.341187 13.629272 10.001861 9.885394 12.870237 11.372949 10.428882 -1.170719 TCGA-S3-AA12 82 0 NA 259 breast stage iiia t3 n1a mx 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 1 1 1 5 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.86270616 -1.02914635 6.67809163 12.14503419 NA 10.44088308 2.55569347 9.08447491 12.17270339 12.90100800 10.27222888 7.21866010 9.58175740 9.39069283 9.10900449 8.49625341 11.02092141 8.37374477 4.67117446 -0.02929357 11.63762238 9.91544471 12.67809178 11.37107843 8.42400332 10.21687945 4.58544332 10.03208362 NA 2.67118013 6.06876538 11.45731634 13.40288302 5.82871281 13.82101718 13.18087126 7.18505183 5.91324607 2.55569347 8.69524639 8.29940769 9.21390666 5.67117163 13.37141199 -0.02929357 9.05021734 15.46852213 NA 10.27506689 11.77244102 4.69865189 10.10515895 1.55571801 12.02533190 8.05021761 -0.02929357 8.33048221 NA 2.97072484 9.82637990 9.52244088 10.09614613 11.49036891 9.12301741 10.43067647 1.77808239 10.79886916 10.48741761 7.89257378 6.79091145 NA 11.18656896 14.62245709 6.28007291 11.47778396 10.48050769 11.32277611 -1.02914635 NA 6.60735695 7.75209225 8.47654411 NA 5.58544332 7.74551971 10.16671996 9.82326214 4.99309916 3.77808239 3.61459207 9.39594857 11.86137693 3.92492649 13.02211156 6.54816224 7.75209225 10.22635138 11.80599358 12.77314805 7.86555018 10.06481039 10.69524648 10.48313729 10.98928060 4.43016482 9.42605987 11.17071163 12.62111129 -0.02929357 10.29435045 8.50795119 1.29266397 3.50179579 8.99032326 10.47306725 9.80520377 8.20435252 14.93184316 10.02330069 9.95870713 8.14065751 0.97070643 16.55790240 8.06349000 11.65679541 9.54153710 10.09679183 9.91251395 7.40536104 10.44245868 -2.9091e-03 -2.9091e-03 9.1299e-01 5.8309e-03 3.7508e-03 9.3098e-03 -1.7803e-02 2.4969e-03 -9.6703e-01 3.6569e+00 -9.7764e-01 1.7732e+00 -1.9399e-03 -1.9399e-03 -2.3402e-03 -2.3402e-03 -2.3402e-03 1.0006e-02 4.3992e-05 0.0000e+00 7.7245e-03 4.1593e-04 -1.3127e-02 -1.3127e-02 1.1679e-02 -7.5682e-02 3.6569e+00 -5.9135e-02 -3.0813e-02 -2.9091e-03 -2.9091e-03 5.2749e-03 5.8309e-03 9.3098e-03 1.8943e-02 -1.7803e-02 -1.7803e-02 2.4969e-03 -9.6703e-01 -9.6703e-01 -1.3858e-03 1.2934e-02 -1.0070e+00 -4.7079e-03 -4.7079e-03 -4.7079e-03 -6.0904e-03 -1.9399e-03 -1.9399e-03 3.0522e-03 -9.5855e-01 1.0006e-02 4.3992e-05 4.3992e-05 0.0000e+00 1.0285e-02 -2.4251e-02 -1.0347e+00 -1.3127e-02 1.1679e-02 3.7465e-03 -5.1856e-02 -5.9135e-02 -1.6429e-02 -1.1335e-02 -1.6154e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 7.56692244 12.05753235 7.80678288 7.89851070 2.67118013 11.45152285 1.97074324 -0.02929357 8.81465360 8.30388803 -0.02929357 7.27451327 -0.02929357 10.73601871 9.41056350 1.77808239 4.39699516 8.63429086 10.76352295 11.80914872 9.13177621 6.99310029 10.02737041 1.29266397 9.99656430 10.43067647 4.32828357 -1.02914635 10.85604769 4.25613508 11.81563454 11.72833100 5.71219956 10.32277611 6.71219956 9.80203986 0.97070643 1.29266397 NA 1.77808239 10.21806683 9.48050769 9.58452211 -0.02929357 7.51039549 6.99310029 10.41833249 6.80362228 9.61097757 NA 11.50016319 5.34577247 4.05819526 9.94377704 6.05628438 3.67116880 9.00553164 6.88959644 6.84724907 NA 13.61278435 NA 10.49184228 -1.02914635 6.81622209 3.21865719 8.14815216 6.30164983 13.727212 11.177137 9.046212 13.821017 9.824042 10.811117 13.371412 12.729997 9.443423 9.957847 11.936517 10.879876 7.752092 8.272229 1.778082 7.026015 10.549577 10.7837121 6.6918314 9.1874785 10.2595988 8.4864324 10.4699756 5.3801234 5.5253203 11.3710784 7.4178162 0.5557180 5.9707317 6.9017068 10.2853159 9.8426379 10.7450832 8.8209196 10.6480118 4.7256212 10.0961461 10.4198813 9.4178158 8.5234016 10.6519710 7.9931003 NA 8.2469035 4.6431578 5.0581953 9.8232621 5.1000147 10.1582889 9.3959486 7.0421945 13.8869853 9.9321824 9.6685689 12.0880511 9.9487280 9.6458076 0.9707064 TCGA-S3-AA14 47 0 NA 218 breast stage i t1 n0 (i+) cm0 (i+) 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.5789931 8.5168185 5.8163795 11.8127673 NA 10.4802924 NA 10.2953504 12.0904538 8.4967028 9.9990708 7.9571572 8.7964037 10.1555160 6.7724347 8.5145969 10.8475973 9.3005166 7.7872320 2.1725195 11.8631752 10.1569409 13.8103359 11.1551595 9.5605398 10.2758102 4.9004418 10.5410288 0.7574500 3.1725195 8.0022451 12.0326394 12.8933010 6.7116807 16.1414816 12.8489203 9.8642659 5.1725235 1.4944668 7.2599852 8.6340018 10.5861504 8.5410288 12.7922839 -0.8275125 9.9538821 12.6955942 3.9798790 10.2003593 10.4983900 7.6360467 6.8163783 NA 13.4124848 8.4109270 4.1267169 8.8572710 1.7574927 4.7872339 9.9382229 9.9636852 9.8884844 11.3418211 10.3580173 10.1704076 1.7574927 11.3276568 10.7733645 7.8235742 6.0913846 2.1725195 11.4694386 15.0286804 9.1275474 11.5709989 11.0297258 7.6921586 0.1724875 6.3721947 7.6723681 9.1062130 11.7111963 -0.8275125 5.3819755 7.4299105 9.5223565 10.9444244 5.5987880 5.2810454 4.8163795 9.6401280 11.6616177 1.9798790 13.4746615 6.5212502 6.8235736 13.0224161 12.9113535 12.2934082 7.2599852 10.6221869 10.6965743 10.5756303 11.4151011 5.1725235 9.1440660 11.3703534 12.6192180 1.4944668 10.3171806 9.0398011 0.1724875 4.8522836 9.8396339 10.4711578 9.8598981 8.7213443 14.6452449 10.1150369 9.6492686 8.7909079 2.4944412 15.8770610 8.8431786 13.5797901 12.3850188 10.1383066 9.6763482 8.8884845 10.1435126 0.00756090 0.00756090 0.01034600 0.00000000 0.02587300 0.04917600 0.02579700 0.00283520 -0.68675000 -0.01182600 -0.01182600 -0.00437070 -0.00648610 0.00047658 0.00158620 0.00158620 0.00158620 -0.00145940 0.01550800 -0.71287000 -0.00049382 -0.02282100 -0.07101300 3.48440000 -0.07542000 -0.10757000 -0.10757000 -0.10757000 -0.03184500 -0.07368600 0.00756090 -0.66878000 0.00000000 -0.03783900 -0.65776000 0.03530300 0.03530300 0.00283520 -0.67026000 -0.69690000 -0.02843200 -0.72337000 -0.67422000 0.03431600 0.00072812 -0.68529000 -0.02432800 0.00047658 0.00047658 0.00158620 0.00158620 -0.00145940 -0.00016863 -0.00016863 -0.65711000 -0.00049382 -0.02282100 -0.72310000 -0.07101300 -0.74086000 0.01536900 -0.10757000 -0.10757000 -0.03184500 0.01229800 -0.07995000 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 -0.701 0.000 0.000 -0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 -0.701 0.000 0.000 -0.137 9.4486468 14.1294430 6.8163783 10.7357186 2.3279460 10.9526520 0.7574500 0.1724875 8.7687120 9.2901654 -0.8275125 8.3006715 2.8729666 9.5000750 9.4899350 2.8729666 8.1697021 9.5123725 9.9373940 11.8289472 10.5733485 8.2439846 10.6941228 2.8729666 9.5344661 10.1704076 7.6113140 NA 11.9885060 3.7574820 12.6592317 12.6170197 8.5669852 9.0536362 7.8764261 9.5333694 8.4717305 0.1724875 0.1724875 0.7574500 9.1907225 9.8484794 10.0605045 3.7574820 6.7992531 7.4854051 10.3721947 5.7872313 9.3880554 -0.8275125 11.1230783 4.3018071 4.4579226 9.0492082 6.4670512 5.0305038 8.4532933 7.2386121 7.2966437 0.7574500 13.5057476 0.7574500 10.1397487 NA 7.5562263 5.2810454 7.4671433 9.2045682 13.359758 5.172524 9.363582 16.141482 9.821779 10.831180 12.792284 12.593798 9.140498 10.746643 13.111918 10.209383 9.106213 9.810958 1.494467 7.443985 10.597214 11.4480649 6.7423782 8.8289473 9.0054123 7.7121466 10.6142268 6.9004430 7.7612367 11.1551595 6.0054135 5.4763039 5.5300739 7.0376370 11.6790779 10.1682895 8.9021432 8.9701838 11.6948587 6.3323929 9.8884844 9.8642659 10.5129289 10.3555374 10.9489554 9.4602347 -0.8275125 9.9618849 7.0236468 6.7798533 10.9444244 7.5212502 10.5366461 9.6401280 7.7461696 13.7485933 10.1440659 10.2513404 12.9822905 10.9946948 9.8307339 2.3424410 TCGA-S3-AA15 51 0 NA 209 breast stage iib t2 n1a cm0 (i+) 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 2 black or african american not hispanic or latino 379.6.0 NA NA 2 NA NA NA 2 5 2 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8971250 8.6186575 6.5098542 11.5533738 -0.7190437 9.3578513 1.2810157 8.8221323 11.7651033 10.8172828 9.8772254 7.4051568 8.5984482 10.2410376 6.0623959 9.2279420 9.0089560 9.8240676 8.7052021 6.1012151 11.4822406 10.9503636 11.3931493 10.8818778 9.4929239 10.2682996 7.7114880 10.6845644 0.2810750 2.0883791 9.3973796 12.3442622 12.8273273 8.6776404 10.8201944 10.3444307 11.2209821 7.4708606 4.2810379 7.9284941 9.9814754 10.2117730 8.8565749 8.1939250 -0.7190437 11.2471806 9.8432781 6.8279295 9.8594933 9.1405703 9.2088135 5.8201943 0.8659980 14.8114609 10.6374876 2.4509605 8.2410374 NA 9.3185826 9.7322468 9.4534633 8.9727791 9.9840741 9.3336037 10.5681708 3.8659980 10.6057788 10.8636481 4.8659980 8.1170862 1.8659980 7.5571604 15.4121692 8.6648263 10.5670157 10.4212264 9.6797793 2.7404743 NA 8.4077402 9.5675934 11.4621879 -0.7190437 3.5289588 7.6253319 10.6136317 10.4892701 5.7073011 7.2810361 5.5478230 9.4904891 11.7049394 0.8659980 13.6215812 4.6385894 6.4609440 12.0407158 13.2721146 12.7751412 7.7768909 10.6269953 10.2468199 10.0531688 10.8231002 4.6029616 8.8828066 11.1300498 9.3908663 -0.7190437 10.6625786 8.9410315 0.8659980 4.1936850 9.6363868 10.0899998 9.7476220 8.8201946 15.1405462 10.2604609 9.0835519 7.5848167 3.6029675 14.8576381 7.6560751 13.0476681 13.2546433 9.9140309 10.4917070 7.6297639 10.2769300 0.0122520 0.0122520 0.0955650 0.0226400 0.0973080 -0.0654930 -0.0328060 0.0088072 0.0088072 0.0124310 0.0124310 0.0124310 0.0000000 0.0000000 0.0096428 0.0096428 0.0096428 -0.0024397 -0.0079496 -0.0635170 -0.0627110 0.1330800 -0.0174750 -0.0174750 -0.0174750 0.0085287 0.0085287 0.0085287 -0.0477480 0.0122520 0.0122520 -0.0518450 0.0226400 -0.0631140 -0.0636510 -0.0328060 -0.0328060 0.0088072 0.0088072 0.0088072 0.0329000 0.0159300 0.0124310 -0.0193980 -0.0193980 -0.0193980 -0.0761810 0.0000000 0.0000000 0.0096428 0.0202570 -0.0024397 -0.0079496 -0.0079496 -0.0635170 -0.0654120 -0.0318510 -0.0479820 -0.0174750 -0.0174750 -0.0631150 -0.0358670 0.0085287 -0.0477480 0.0171790 -0.0169250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10.8962055 13.7836810 2.0883791 10.1131345 5.6560759 11.3892334 8.3921714 1.8659980 9.1743373 8.8085128 7.1636789 9.2632164 4.8045957 10.5939186 9.7728887 3.9248885 10.0533502 9.7125332 8.5265884 9.9892574 8.9924790 7.3947782 12.0648524 3.1879261 8.6840476 10.5681708 4.8356260 NA 11.1413467 4.1390192 13.1263297 12.8688132 8.3711480 9.6429795 9.3254298 9.8201944 4.1390192 2.6029557 0.8659980 -0.7190437 9.6264410 11.1083784 8.2753889 6.2235500 9.2094504 7.9605158 9.6029638 5.3895599 10.1841644 5.6029646 11.9251173 4.5664377 5.0089574 9.3981334 7.8452994 11.8683444 10.2359589 9.5218269 13.9709791 1.8659980 13.4932280 1.6029794 10.8036172 NA 9.4459427 7.0225032 7.5431308 8.3281597 11.945927 7.984939 8.742515 10.820194 10.217674 10.823100 8.193925 11.166732 9.571054 10.144448 14.136634 11.686443 9.567593 8.438383 3.528959 7.629764 10.046736 11.274682 4.235229 8.110758 9.255450 7.808512 9.629465 9.492924 8.955228 10.881878 11.257958 4.281038 6.126525 9.029832 11.913804 10.961395 8.077335 8.948147 9.530149 10.242485 8.972779 10.172060 9.831782 10.751695 10.417386 8.709396 NA 10.100145 9.008292 12.594911 10.489270 7.139017 10.999423 9.490489 7.430935 13.849348 10.112343 10.353168 12.608448 11.763087 9.574507 6.139017 TCGA-S3-AA17 64 0 NA 119 breast stage iib t2 n1mi cm0 (i+) 2-10-2014 female 2013 NA yes infiltrating ductal carcinoma yes 0 black or african american not hispanic or latino 379.6.0 NA NA 1 NA NA NA 1 3 3 4 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3541410 5.8171320 6.6213120 11.8564726 -0.2052307 10.1284784 NA 8.7460487 11.0708883 10.4516356 9.3750225 8.4476089 9.5859268 9.4277591 6.1076460 9.6910963 10.1228778 9.3005754 6.9291897 5.7605483 11.0042172 10.9836618 6.5956633 10.5654278 8.8309376 10.2199798 9.1076468 9.8199035 -1.2052307 1.7947693 9.1610860 9.9628091 12.6805556 6.6402536 12.8211144 13.0803829 8.8648847 6.3946770 4.6774068 6.4812650 8.8621981 10.7791824 5.3493511 11.8764138 4.6021183 10.3015673 12.8443572 6.3416585 9.3847052 10.3862862 7.1121767 7.5124402 0.3797318 15.1030201 10.2397581 0.7947693 9.0673938 NA 6.2293918 10.0102969 9.9104579 8.6292349 10.8185183 9.8581590 10.3416584 2.9646943 11.3785518 10.7989844 6.7720440 8.2459752 1.7947693 11.4832328 15.1297006 8.2409788 10.3000792 10.8591699 10.4341046 -0.2052307 4.2210264 9.4122313 9.0638906 10.8725810 -1.2052307 2.4952091 7.7195764 9.9323955 10.2402961 5.3025603 7.8473318 6.1610855 9.7727593 11.6051347 4.7489603 12.8633743 5.6895815 7.5988952 10.1929732 12.2111656 13.0676852 8.4313885 10.6017162 11.2233858 10.6573819 10.7659482 5.2377090 8.5496515 11.4313885 12.3952576 NA 10.1870813 8.7562137 2.6021243 4.4731180 9.7016546 10.1719744 10.2241707 8.9621820 15.2104067 11.2038896 9.5404382 8.9882893 1.7947693 15.2865231 7.6682078 12.8258620 12.1668127 10.0307782 9.3693574 7.6117478 10.7550809 -0.5022500 0.4895800 1.0314000 0.0262330 0.0723960 -0.0673240 0.0114000 0.0111210 0.0160060 0.0855100 0.0855100 0.0855100 0.4737500 -0.0044312 0.7648500 0.2902400 0.3185100 0.0230050 0.0331270 -0.0149160 -0.1919900 -0.5013100 -0.5099300 0.0157270 0.0157270 -0.0182160 -0.0182160 -0.0182160 1.1416000 -0.5232900 -0.0055375 0.0311550 -0.5075300 -0.4871200 0.5102000 0.0114000 -0.5146000 -0.5184600 -0.5024500 0.0343020 0.5816600 -0.0114730 -0.5116600 -0.4759600 0.0000000 0.0000000 0.0000000 -0.0044312 -0.5197900 0.2559000 -0.5066000 0.0230050 0.0331270 -0.5169200 -0.5075300 -0.1919900 -0.5013100 -0.5033900 -0.5099300 0.0157270 0.5070700 -0.0182160 -0.0182160 0.5105400 -0.5206100 0.0375000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.041 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.041 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 9.9540046 12.2498342 3.8822224 9.6933653 6.7076532 11.5275673 7.3608181 NA 8.6651287 6.8391584 NA 6.9643386 3.8822224 9.8642137 9.5047094 3.7016599 10.2078628 9.0732134 10.2283494 10.6105474 9.2710951 8.0592065 10.2377073 4.1870789 9.6918531 10.3416584 3.4386255 NA 11.0250846 3.1166974 12.5845013 12.2325160 7.4350084 9.3493527 10.8996902 9.5454709 3.7489549 3.3183313 -0.2052307 0.7947693 9.1849329 10.3956060 9.8017911 2.4952091 8.7923810 8.5429568 9.4422224 7.1301546 10.0842065 NA 11.5575612 5.5891792 6.8446129 9.2337637 5.7982527 8.9508469 9.6804603 9.7343431 10.8188647 -0.2052307 13.8531785 NA 10.1676290 NA 7.9188853 4.8391584 7.4094741 8.9019810 12.407908 6.033170 8.286617 12.821114 10.435009 10.898707 11.876414 11.146807 9.396423 10.695253 13.089528 11.417502 9.063891 9.152316 2.701660 7.047429 12.506753 10.882227 8.288619 8.197776 8.845973 9.036747 10.017686 9.459211 7.402095 10.565428 6.944511 5.286619 5.318324 8.315442 9.887521 11.261605 8.206275 8.978399 11.959671 9.007868 8.629235 10.345030 11.853263 10.140169 10.894769 8.435009 4.438619 9.615190 7.415900 10.161633 10.240296 4.522684 11.219788 9.772759 8.241847 13.908788 9.804592 9.602119 12.636820 10.538336 9.936871 4.964690 TCGA-W8-A86G 66 0 NA 161 breast stage iia t2a n0 (i-) mx 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 372.12.0 NA NA 2 4 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.50082157 6.66627656 6.94161811 11.86952175 0.50974651 9.79286056 0.50974651 8.72409121 11.27850789 11.98026159 9.07836166 7.43656248 9.08594164 9.07709449 8.04893092 9.17036250 10.77265001 9.54319523 8.06436123 1.24671210 13.09817452 11.27409093 11.49276576 11.13334890 9.60955830 9.82567657 4.01227367 10.07701850 1.24671210 4.38424326 6.73859087 12.75601794 12.99131937 7.30851378 13.27609404 13.14549031 10.51492882 7.69959674 5.01227367 7.11956680 9.42465550 10.07201466 9.10098290 12.53733267 3.78278596 11.52843604 13.50347721 7.36775283 9.79290691 10.75849041 8.47170407 5.44837239 NA 13.82660193 7.38526536 3.38424326 9.60340974 -0.07521599 4.01227367 9.59811877 9.54502952 9.19510493 11.48275195 10.07646049 9.95547686 2.09474278 11.01094589 10.97465822 8.18219768 7.22401808 4.44837239 12.03708627 14.64982972 8.08581553 9.87682280 10.53075209 8.67969719 3.01226473 4.38424326 8.41264986 8.03594551 11.91668578 NA 4.28235825 7.44837157 9.43359483 10.37344224 7.92762450 5.89059504 3.56866451 9.67384100 12.09473470 3.17274352 13.05457566 6.44050876 7.52843614 12.87500103 12.78812484 12.77528957 8.62351428 10.31551608 10.59236481 10.47218626 10.71637956 3.83170500 9.35526233 11.87116773 11.79786924 2.38424326 10.31980826 8.69464762 1.73218235 5.17747535 9.46493777 9.96509942 10.31390326 8.86144769 14.50114640 10.19452086 9.08215649 9.61742522 4.44837239 15.79481311 9.64590895 12.78288783 13.14903752 10.07074177 9.89563466 7.74817674 10.61972030 -0.00470790 0.90030000 0.45462000 0.00027728 -0.00802440 -0.01119800 0.26012000 -0.01050800 -0.01050800 0.27206000 0.27206000 0.26301000 0.00652620 -0.00354900 -0.00781030 -0.00781030 -0.00781030 0.01950300 0.01950300 -0.01615400 -0.00716340 0.47838000 0.01014600 0.00489150 0.00489150 0.28010000 0.28010000 0.28010000 0.28074000 0.00968190 -0.00470790 -0.00526100 -0.00802440 -0.01119800 -0.01119800 0.26012000 0.26012000 -0.01050800 -0.01050800 -0.01050800 0.24840000 0.24840000 0.27206000 -0.00249380 -0.00249380 -0.00249380 0.00305220 -0.00354900 0.00763920 -0.00781030 -0.00781030 0.01950300 -0.47681000 -0.49152000 -0.01615400 0.00346280 -0.48165000 -0.48197000 -0.48092000 0.00489150 0.00166420 0.28010000 0.28010000 0.27584000 0.24093000 -0.02466100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.900 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.900 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 8.23769277 12.51656576 7.49466521 10.62351437 2.73216064 11.18837230 1.92482200 1.24671210 9.07582621 8.89059382 -0.07521599 7.13912871 3.62524711 9.52006723 9.96235670 2.24674250 7.99089872 9.76085997 11.27630107 10.59944333 9.50578417 7.75135794 10.88662109 2.24674250 9.95271562 9.95547686 5.59723617 -1.07521599 10.51071117 5.53951866 13.22559122 11.89940353 7.45619093 10.19510505 8.24448181 9.73618441 5.73216335 -1.07521599 1.24671210 4.53951866 9.68968128 10.35107439 10.10534048 7.52843614 10.57917270 8.23314893 9.71678654 4.67969965 9.72651808 -1.07521599 11.83113664 0.92478401 5.53951866 9.60168352 6.68396588 2.92480300 9.67384100 6.62525003 6.50977184 -1.07521599 14.32848750 -1.07521599 10.28236173 NA 7.86732446 6.44050876 7.70944436 8.41264986 12.473577 4.807453 8.450330 13.276094 10.314441 10.192182 12.537333 12.595355 9.042076 9.535834 12.492409 10.195689 8.035946 8.642486 1.509797 7.855547 10.499403 10.8555470 5.5097718 9.0002888 8.3594377 7.0897164 10.0482004 6.1047183 6.0540931 11.1333489 8.2624317 5.2285917 9.8533281 6.1322149 10.9496031 10.5677639 8.3214145 9.6278481 9.5596207 4.0122737 9.1951049 10.3288868 11.3508123 10.2222992 10.3563073 7.8819117 NA 9.6611186 5.9197286 5.6796968 10.3734422 6.1342641 11.5839426 9.6738410 6.6459091 14.5013531 9.7990227 10.5367566 12.3954686 11.0362714 10.5256518 0.5097465 TCGA-XX-A899 46 0 NA 292 breast stage iiia t1c n2a mx 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 5 white not hispanic or latino 372.12.0 NA NA 2 5 NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0637666 9.2344874 6.5439150 11.6146302 2.8250936 10.4389883 -0.3448314 9.7057005 11.4621238 9.9411517 10.0496342 8.2569422 8.8175628 10.2264501 6.4753508 9.2429490 10.4548579 9.9131485 8.2680399 4.9771013 11.8076148 11.0858854 9.4544531 11.7424686 9.1258303 10.1565111 7.5859090 10.5986167 1.4625235 2.1146002 9.7192406 12.0069389 13.0750659 7.7610798 13.0640319 12.1039331 10.6930616 6.1629653 2.2401311 7.8743402 8.7077394 10.3138292 8.0431886 12.0015467 4.2097575 11.0091453 12.8396595 5.3830925 9.9511527 10.1708713 9.7084187 4.1146002 NA 14.1821044 11.2085440 4.7426368 8.8983456 -0.3448314 4.6093649 9.7863855 10.2326003 10.0149211 11.7262986 10.0421117 10.6975149 4.5620592 11.2813368 10.9039885 7.0388762 7.9405738 12.8848916 10.2240777 15.4145266 8.9994008 11.4831096 11.0359031 8.5859090 2.4625235 2.7426315 9.3460425 8.9827241 11.3438589 NA 3.7426315 7.5100402 10.3809638 10.9532341 5.2698822 7.3659777 5.5620623 10.5796129 11.7289784 -0.3448314 13.4376579 5.3966390 7.9612332 12.9905619 11.6766720 12.9162380 8.0127234 10.3222831 10.7452839 10.6759778 11.2159820 5.2401349 8.5620623 11.4318101 12.1443923 -0.3448314 10.6484637 9.1258303 2.2401311 4.4137972 9.6789258 10.6705866 10.2527585 8.8875923 15.0205712 10.7309849 9.6523510 8.4721551 2.9770967 15.1594319 8.6079128 13.7309849 13.0695264 10.0835317 9.4183839 7.8839904 10.2522697 -0.07093700 0.27537000 0.27537000 0.00110930 0.00110930 -0.00027724 0.35545000 0.00388540 0.00388540 2.21400000 2.79460000 0.29374000 0.00000000 0.00000000 -0.00180140 3.65690000 3.65690000 -0.00332430 0.50109000 -0.01161100 -0.19575000 0.01335300 0.00833510 0.00833510 0.00833510 -0.00027724 -0.00027724 -0.00027724 0.00249690 -0.07093700 -0.07093700 -0.08293400 0.00110930 -0.00027724 -0.00027724 0.05039300 0.13598000 0.00388540 0.00388540 0.00388540 -0.00166290 -0.00166290 -0.36102000 -0.06933200 -0.06933200 -0.06933200 -0.06933200 0.00000000 0.00000000 -0.00180140 -0.36034000 -0.00332430 0.00430210 0.00430210 -0.01161100 -0.19575000 0.01335300 -0.34950000 0.00833510 0.00833510 -0.00857660 -0.00027724 -0.00027724 0.00249690 0.00485790 0.00849060 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 9.982724 13.770174 7.288167 10.580355 6.488062 10.427074 7.331128 1.240131 8.924298 8.820078 NA 9.296718 5.804918 9.977100 9.622398 3.864622 11.260420 9.275391 10.584800 10.224552 9.406155 7.688594 11.584800 4.327594 9.619512 10.697515 6.403365 NA 10.805236 3.513150 12.562438 11.855917 8.213592 10.108957 9.443890 9.543154 4.178731 1.240131 -1.344831 2.655169 9.058184 8.835081 9.643856 6.597686 8.355160 7.646693 10.287712 5.462527 9.443074 -1.344831 11.087191 5.369418 4.804921 9.253382 6.080849 7.236372 10.269421 9.165936 7.995021 1.462524 13.668451 1.462524 10.402525 NA 8.393264 4.763698 7.528616 8.594751 15.584861 5.327598 8.559054 13.064032 10.356478 10.503794 12.001547 11.569183 11.816710 10.619512 13.458294 11.952804 8.982724 8.245759 2.562059 7.143012 11.365117 11.314944 6.396639 8.863406 8.972584 8.158997 10.095324 9.076184 8.554529 11.742469 7.571051 3.240131 6.355612 7.685591 11.741639 10.713163 8.840047 8.996134 11.591993 7.854844 10.014921 10.171364 11.416307 10.963226 10.449587 8.367699 NA 9.683174 7.770891 8.754519 10.953234 7.073024 11.074605 10.579613 7.110622 13.964293 9.952661 9.993351 13.020674 11.155266 9.904878 4.537812 TCGA-XX-A89A 68 0 NA 278 breast stage iib t3 n0 mx 2-10-2014 female 2013 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 372.12.0 NA NA 2 5 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3479085 9.3209907 7.6424929 11.9202664 2.6184266 9.8398196 -1.0819191 9.5345276 11.0424232 9.8293707 10.1771335 8.1515986 8.5546034 9.8758063 5.2578291 9.3294896 9.7285503 9.9813738 8.3876206 5.0472635 11.0578498 10.5943766 9.2387792 11.2186173 8.9458848 10.3113691 7.1127356 10.0696295 0.5029416 5.3609226 10.0791106 11.4551971 12.2403294 9.2079975 11.5945970 12.4280011 10.5262336 6.4415399 3.6184149 8.2033808 9.0929043 9.4454557 8.6762018 11.9887706 3.1659119 10.5331486 12.6790105 6.8127960 9.6285183 10.0765884 10.0910312 4.4725658 -1.0819191 14.6706641 12.6198267 3.4415366 8.9840678 -1.0819191 5.2217611 9.8808747 9.8263713 9.1347246 10.3368854 9.6535348 10.4892573 6.0265035 11.1500998 10.9417331 6.2033813 7.5253094 8.5271575 9.0107359 14.9742142 8.2627183 10.6480242 10.3108328 8.3588481 1.7253485 -1.0819191 8.1467972 8.6944119 12.4312129 NA 4.6993406 7.4493600 9.4925723 10.9864212 6.1274331 6.9623732 5.5761895 10.0459731 11.6853356 3.8721787 13.4896721 3.9179759 7.5290033 12.3265738 12.0871208 12.5937153 8.1151956 10.6223147 10.4744848 10.2965663 10.7626845 4.5618332 9.3515641 11.2900275 10.3384653 -1.0819191 10.8383316 8.7868012 2.0879041 5.1042402 9.3070724 10.5048185 9.4542259 9.0549697 14.8940953 10.0007931 9.3442435 8.6944119 4.0879041 14.6009459 8.3997782 13.3936488 12.9696125 9.7658191 9.6296457 7.7445271 9.6928646 -0.25898000 0.01284500 0.00478230 -0.25547000 -0.26476000 -0.00216680 0.00908150 0.00000000 0.00060468 -0.52967000 0.01242700 0.00074336 0.01521800 0.01521800 0.01689500 3.65690000 -0.52914000 0.00987850 0.01117200 -0.53151000 -0.25124000 0.02782900 -0.51183000 -0.51183000 -0.51297000 1.57080000 0.06298900 0.06298900 0.03261400 -0.51101000 -0.25898000 -0.25362000 -0.25547000 -0.00216680 -0.00216680 0.00908150 0.00421340 0.00000000 0.00060468 0.00060468 0.00657640 0.00727200 -0.52967000 0.01857400 0.01857400 0.01857400 0.01857400 0.01521800 0.01521800 0.01689500 -0.52978000 0.00987850 0.00560310 0.02835500 -0.53151000 -0.25124000 0.02782900 -0.51739000 -0.51183000 -0.51183000 -0.52600000 -0.49043000 0.06298900 0.03261400 0.01348500 -0.50791000 0.000 0.000 -0.519 -0.519 0.000 0.000 -0.532 -0.251 0.000 0.000 -0.517 -0.512 -0.512 -0.525 -0.525 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.248 -0.248 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.143 0.000 0.000 -0.519 -0.519 0.000 0.000 -0.532 -0.251 0.000 0.000 -0.517 -0.512 -0.512 -0.525 -0.525 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.248 -0.248 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.143 10.03432275 13.92246257 3.31029649 10.92990481 3.56183933 11.31029615 1.50294157 NA 8.83981979 10.04790573 -1.08191913 8.29012532 5.59040441 9.74373256 10.68160607 1.91796634 11.07500983 9.09913106 8.76660179 9.31565340 9.43330397 7.71564014 12.17889826 3.67286657 7.17536691 10.48925732 4.40983216 0.91800452 10.59393579 3.44153660 12.47316697 11.87108388 8.43170652 9.84130629 8.77440427 9.41383374 3.31029649 0.91800452 -0.08207184 2.82486966 8.50294117 9.36506193 10.03237185 7.62188264 7.63527844 7.44545607 9.76346884 5.06772475 9.07658849 -0.08207184 11.99546208 4.50294157 4.04725918 9.34536488 5.34491369 6.54003037 10.22745506 10.12377197 10.65649324 NA 13.72603792 1.50294157 10.45955939 NA 6.94034649 6.11765141 7.59393560 9.22061775 13.600170 5.239906 8.694412 11.594597 10.120715 10.278826 11.988771 11.759543 11.126771 10.401794 13.369963 10.305996 8.694412 9.347386 3.239902 6.818845 10.647175 11.496116 6.686163 8.630506 8.489731 7.635655 10.883186 8.401795 7.248895 11.218617 8.087904 2.618427 6.472567 7.723142 11.152197 11.111812 7.417825 8.830868 10.970547 6.502942 9.134725 10.436632 10.126823 10.401291 10.526234 8.365062 NA 9.861651 8.277904 7.547336 10.986421 8.031721 11.251676 10.045973 6.788713 13.909811 9.690293 10.076588 12.834418 10.938959 9.806722 4.590404 TCGA-Z7-A8R5 61 0 NA 3042 breast stage iiia t3 n1a mx 2-10-2014 female 2005 NA yes infiltrating lobular carcinoma yes 3 white not hispanic or latino 379.6.0 NA NA 2 NA NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.2023808 5.9844914 6.1990853 10.9236828 NA 9.1828673 0.2565276 8.2705915 10.4202209 10.8959119 8.8564840 6.6316107 7.8859276 10.0346484 7.2338507 8.6849313 8.8434111 9.4660246 8.0214425 5.0379313 11.5517662 12.1392143 12.0534220 10.1865693 9.1873085 10.0346484 6.8264265 9.3986783 1.8415304 0.8415706 7.7323045 11.9239046 12.6258959 7.2733797 13.0168753 12.1707695 12.7769443 7.5694539 4.3440331 6.7077829 8.9254562 8.7323045 8.3677070 11.5448605 0.8415706 12.4680033 12.3375552 7.0379313 10.7350173 9.9819374 7.4113890 5.2338497 0.2565276 13.8072483 9.7036545 -0.7434724 7.8377717 NA 3.6488911 8.9483147 9.0926216 9.4877924 10.6521053 9.1376851 10.2302686 2.7160032 9.8443488 9.6052993 6.7879522 7.4214783 9.5233577 9.9912808 14.3456906 4.6855197 9.2381384 9.7869776 7.4314968 3.8415304 6.6488882 7.4805729 7.2844771 12.6504979 0.2565276 4.9844937 6.8786236 9.2830946 11.0284733 6.4660251 6.1145523 5.4853914 9.2409897 11.9364911 4.2107707 13.5449327 6.1145523 7.0703528 12.2679732 13.1212410 12.0068595 8.9535388 10.8044297 10.6212531 10.5251132 9.6185149 2.0639171 9.8121191 11.1365373 10.7791528 -0.7434724 10.3546032 8.2309859 1.2565880 3.5256054 8.5488928 11.3413796 9.1858296 8.4805729 15.4107762 9.8931958 8.5233577 7.2899940 4.5044996 14.9635798 10.0189532 13.1832378 13.3286200 9.3819848 9.9004274 6.8712806 9.4227971 -0.15324000 0.48551000 0.49639000 -0.15848000 -0.15848000 0.13773000 0.14667000 0.15278000 0.13699000 0.08493200 0.08493200 0.08493200 -0.00415460 -0.00415460 -0.15631000 -0.15631000 -0.15631000 0.14995000 0.13933000 -0.16294000 -0.00083160 -0.15042000 0.00889200 0.00889200 0.00889200 0.00861350 0.00861350 0.00861350 0.01126100 -0.15324000 -0.15324000 0.00569190 -0.15848000 0.18404000 0.13773000 0.14667000 0.14667000 0.15278000 -0.17322000 0.14741000 -0.00802440 -0.00802440 0.08493200 0.00000000 0.00000000 0.00000000 0.00000000 -0.00415460 -0.00415460 -0.15631000 -0.15631000 0.14995000 0.13933000 0.13933000 -0.16294000 -0.00083160 -0.15042000 -0.18282000 0.00889200 0.00889200 0.00499690 0.00861350 0.00861350 0.01126100 0.00083195 -0.14798000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.490 0.307 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.490 0.307 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9946634 12.4828329 5.9289956 9.4672426 3.7801316 11.1765518 4.7801316 2.5785040 9.5908445 9.1843492 1.2565880 7.6402753 5.0114599 10.1392143 9.5941930 1.5785040 8.3935625 9.2266771 9.5056847 11.3043768 9.5286645 6.5044980 11.1765518 3.4264929 9.4012294 10.2302686 4.7801316 NA 10.6958827 4.6828373 14.0838147 12.1529036 8.1634620 10.1161060 8.3036949 10.1679631 3.7801316 4.2565729 NA 0.8415706 9.4239892 11.1854596 8.6207059 5.2107668 9.0672391 8.7343296 10.5494680 4.8712818 9.9570109 0.8415706 10.8972680 2.0639171 6.1873085 9.5215416 6.7218115 5.8564853 10.4383446 8.3199665 8.6574507 0.2565276 14.6442183 0.2565276 11.1498727 NA 8.1453147 6.1269357 7.9604746 9.0428407 10.9091518 5.4853914 8.7057198 13.0168753 10.2817108 10.8518287 11.5448605 10.4082220 9.0526107 9.7693117 12.8947808 10.8415337 7.2844771 9.3226603 0.8415706 7.5830008 9.5534874 10.6190630 5.1634625 8.6870236 8.7444114 6.4660251 9.0983872 7.2677989 7.3703134 10.1865693 7.6617126 0.8415706 8.7118985 6.4258956 10.5092366 10.2830946 8.0799386 10.3967619 4.3440331 5.9289956 9.4877924 10.7221376 10.4550162 10.0436576 10.0558529 6.0767493 NA 10.0608555 6.7241768 7.6659619 11.0284733 5.5419732 11.3463527 9.2409897 7.3064199 15.1873778 10.4069532 10.2899942 12.6874157 10.6483518 9.1453144 2.0639171 TCGA-Z7-A8R6 46 0 NA 3195 breast stage i t1c n0 m0 2-10-2014 female 2005 NA yes infiltrating lobular carcinoma yes 0 white not hispanic or latino 379.6.0 NA NA 1 NA NA NA 1 1 3 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.99768412 4.64699208 8.11731063 11.36561846 NA 9.38695856 NA 9.27715649 11.67888306 9.54785716 9.56187388 6.93239312 8.03548590 9.52214248 6.53776198 9.32568840 10.47389201 9.33815228 5.62681290 2.56452450 11.36009049 9.56519121 9.00356457 11.65183509 8.76477773 10.41370334 5.54315559 9.99029957 -1.52284079 4.83461515 6.74852832 10.60441498 12.28693404 4.98485818 12.31607233 12.26496800 8.91169368 6.12092212 0.06198352 5.82579326 8.08254506 8.69986044 6.92827675 12.97678678 1.93651545 9.64385619 14.19482218 6.52145911 9.76015373 11.37623351 5.92000978 5.44285063 1.06205262 14.00106960 9.57896229 0.06198352 6.35358266 NA 3.43126191 9.03548618 10.32764302 9.20243168 11.51889570 9.15478521 10.14151275 -0.52284079 10.35856187 10.26333505 7.94670747 6.83461768 3.93649661 11.17728841 15.07979330 9.18911959 10.19345624 10.09774352 7.28763666 2.06201807 NA 7.97890262 8.59730322 11.35989953 -1.52284079 5.07697802 7.64699064 10.59405909 8.52963357 7.77627378 4.78084550 5.48829327 9.57378066 12.08543578 5.09177599 13.61569723 6.21177540 6.97292007 11.85468270 11.68606179 12.53514175 7.95279890 10.11956848 10.74385195 10.02160007 10.85183327 3.64699208 9.24855500 12.20456051 12.50298360 1.47705557 10.37415453 9.32333944 0.47705557 3.56749677 9.16356590 10.56585370 9.71248143 9.64385619 15.11571346 9.79899354 9.51255184 8.41370323 3.43126191 15.81554940 9.42397182 13.25339566 11.97029546 10.10459928 9.90333026 7.18442412 10.47145778 -0.0663860 0.6693400 0.6600000 -0.0109220 -0.0176660 -0.0567120 0.5260800 -0.0139530 -0.0139530 -0.8157300 -0.8157300 1.3711000 0.6786400 0.0000000 0.6649300 3.6569000 -0.8151500 -0.0044312 -0.0044312 -0.0695020 0.8202000 -0.0559030 0.0272160 0.0307320 0.0360880 -0.0603450 -0.0603450 -0.0603450 0.6690000 -0.0663860 -0.0663860 0.0018030 -0.0109220 -0.0567120 -0.0642400 0.5260800 0.5224600 -0.0139530 -0.0139530 -0.0139530 0.0183830 0.0131300 -0.8157300 -0.0472600 -0.0771250 0.6313400 0.6313400 -1.2875000 -0.0013858 0.6649300 -0.7984400 -0.0044312 -0.0044312 -0.0044312 -0.0678600 0.8129800 -0.0716660 -0.8200400 -0.7680900 0.0307320 -0.0221950 -0.0603450 -0.0603450 0.6690000 -0.0532060 -0.0685290 0.000 0.000 -0.112 -0.777 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.417 0.000 0.631 0.106 0.000 0.000 -0.112 -0.777 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.417 0.000 0.631 0.106 7.58297367 13.66858738 7.59080783 9.90647215 2.38396689 10.79023192 0.06198352 NA 9.31390473 7.89280750 -1.52284079 7.16005998 2.56452450 10.57147308 9.48128582 5.13527628 5.78084550 8.94874071 8.85752635 10.66596332 9.54599828 6.65697395 10.19559835 0.79900439 7.25514285 10.14151275 3.64699208 -1.52284079 10.71098461 1.28439568 12.09934610 12.10368708 6.38995393 9.41443916 7.95077108 9.87901157 2.38396689 1.28439568 -1.52284079 9.72321228 9.06014820 10.79927531 9.38169997 2.28442529 7.88842789 8.28924290 9.80910200 5.39592994 9.95229221 -0.52284079 9.70888661 2.06201807 2.79898366 9.36388988 6.75982961 2.06201807 9.12272396 6.97691119 4.66688722 2.17750326 13.77734649 NA 10.12137240 NA 6.81691581 3.38395307 6.80798210 7.99473471 15.945641 5.686520 8.228609 12.316072 9.927761 10.502551 12.976787 11.984612 8.347430 9.988324 12.786115 11.428532 8.597303 9.338928 5.499435 7.277965 10.394438 11.62204225 7.44573250 8.61533721 9.18787189 9.22021676 11.44060458 5.84338846 7.98485989 11.65183509 7.30361364 0.06198352 6.52691389 8.37103431 9.29564773 10.01136830 9.96691333 10.20838447 9.52145950 4.40780140 9.20243168 11.14926978 10.34318527 9.46148395 10.61181262 7.93239253 NA 8.48329341 7.63900347 3.86938780 8.52963357 6.12811809 10.87072404 9.57378066 7.45434536 13.75845218 10.76621980 9.39294482 12.49856600 11.51821118 9.56452831 0.06198352 TCGA-3C-AAAU NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 1 1 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.10642063 5.87263179 6.27702139 11.32432773 0.04823619 10.61203516 1.46325624 9.98091029 12.39333135 11.78390039 9.86678545 8.29137747 9.58088395 10.25521769 6.85984534 9.04820348 11.42866444 10.39064845 6.75786200 2.04820130 12.25134740 9.83664988 14.12899313 11.64392706 9.55929716 11.04373499 4.13566620 10.28420560 -0.53679608 1.27058874 6.60789840 12.12857676 13.77782409 9.56455994 12.79632629 12.90488824 9.95659599 7.81196931 4.98680228 5.33360621 7.88950579 6.55599863 9.24869327 12.41160809 2.55070370 10.48976429 13.80750207 5.19115992 9.80885673 11.32839416 3.71116448 9.33283479 1.46325624 13.66377744 9.92880718 2.46323008 7.44908260 NA 3.88950275 10.33013338 10.26049701 10.24172866 11.73616217 9.11698173 9.69925508 NA 12.00445848 11.25297824 7.37912013 6.88950518 2.55070370 10.60630517 14.45651097 9.40833356 11.49114685 11.49494206 7.32122190 1.04823619 8.28978929 8.75095314 8.92778655 11.30224776 NA 5.56127420 8.51852334 9.80142011 10.75181860 4.63316380 6.85125807 4.16368389 8.95509393 12.09305278 5.12145063 13.34378098 7.14272077 8.13389689 12.91573951 12.64182789 12.23936540 7.92676505 10.86385353 10.98140224 10.84255149 11.93275548 6.21143279 8.26737193 11.72870938 12.29385509 -0.53679608 10.38210413 9.25440366 3.41743399 3.83200894 9.71944957 10.43622067 9.95208526 9.39545552 15.02497628 11.19604424 9.71649745 7.53738227 7.30244427 15.27069640 8.71826949 10.64408240 11.32878083 11.14316073 9.50215991 9.02548317 10.75704292 0.215910 3.656900 0.186850 -0.457580 0.258620 3.656900 0.165860 0.146970 -1.088300 0.197710 0.197710 0.221630 -0.482710 -0.467590 0.184340 2.096500 2.603700 0.186160 3.656900 -0.453400 -0.427890 0.118440 -0.567340 0.078294 0.078294 0.000000 0.000000 0.000000 1.823800 0.068865 0.215910 -0.399080 -0.465890 -0.471730 -0.380240 0.247580 0.287490 0.146970 -1.088300 -1.119000 0.226690 0.208700 0.182920 -0.457680 -0.488030 -0.488030 -0.488030 -0.467590 -0.467590 0.105410 -0.465250 0.186160 -0.469820 -0.469820 -1.080300 -0.491040 0.149500 0.122690 -0.567340 0.078294 0.215300 0.000000 0.000000 0.725650 0.906940 -0.596140 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.442 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.229 0.229 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.395 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.442 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.229 0.229 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.395 8.23473027 12.50985332 8.13389689 9.95959528 5.32122100 10.81141572 2.63317543 NA 9.00239958 8.14798942 1.04823619 6.04549539 1.63315218 9.64935517 9.38061301 4.59252282 7.13919831 9.96954841 11.04632359 10.57633185 9.54049056 8.28660812 10.31655036 1.92265457 10.25846887 9.69925508 3.16367584 NA 11.00191481 3.63316380 11.96134210 12.54164188 7.01398810 8.56914927 6.86412051 9.43550275 7.10348610 0.46320392 0.04823619 3.78517387 9.37837333 9.05289187 10.39619375 3.55070370 11.36211615 7.08162617 9.67816700 5.58218264 9.55004046 NA 12.41752806 2.16369194 9.08070829 9.82872677 7.77233041 4.59252282 8.17060010 7.26090260 6.62311185 0.78517387 12.90151291 0.04823619 11.44302330 NA 5.63316671 4.16368389 7.91445211 8.96109281 15.553951 7.351984 10.802813 12.796326 9.682409 10.409782 12.411608 14.194905 9.950041 10.644393 13.890128 11.118772 8.927787 7.660457 2.986811 7.662913 11.713539 11.012063 7.857704 9.436938 9.215622 9.699255 9.965854 6.277021 8.602792 11.643927 7.696860 1.633152 7.480049 8.704127 8.885306 9.518523 9.034993 9.632540 10.716497 5.561274 10.241729 9.850720 9.882674 9.548713 10.422156 9.135666 4.191160 9.099883 6.857875 6.211433 10.751819 10.262927 10.971746 8.955094 8.128701 13.481963 10.615209 9.553353 12.940746 10.658921 9.672694 2.463230 TCGA-3C-AALI NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 2 2 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.1582823 4.3305297 6.5047824 11.5838364 0.1210154 9.1831247 NA 8.9883572 11.4134001 13.4901987 9.9057134 8.0399417 9.1952199 10.9024382 6.6288727 9.4564688 9.9821654 10.2111910 6.7577034 3.2909994 10.6737476 10.7251684 13.7629045 10.4944875 8.6048942 10.4868541 7.7864147 10.4852132 NA 4.2085407 7.8005589 11.9842969 12.4565763 6.4609293 17.5703360 12.0403143 9.5325895 3.9284367 NA 6.3594825 8.7540738 6.1654718 6.4156995 12.5625962 -0.8788519 9.9073481 12.8606482 2.9284272 10.2064447 11.3241206 8.2960044 9.9146819 4.4786289 14.2605999 9.3462859 0.7060221 7.2348203 -0.8788519 5.0037237 9.7917348 9.8023170 9.1069204 10.3158354 9.1586256 10.1565650 -0.8788519 11.3396418 10.7752670 7.0983585 7.1434465 1.7060221 8.8370406 14.7315267 7.9065311 10.4231462 10.1274046 8.1489844 1.1210817 4.4430098 7.7172686 8.3305320 10.6470886 NA 6.4248600 8.8370406 9.0488566 10.1118916 5.4248583 6.3498978 5.0518158 9.5629851 11.1922056 3.5805073 12.9752651 7.7022794 7.1978939 11.1733069 13.7891879 12.4408917 7.1817744 11.2121833 9.6679730 9.1792055 10.6866567 3.8215163 9.3280928 11.4578640 8.9821654 -0.8788519 11.1551897 8.8759662 2.8215266 4.5158007 9.2580697 8.6947256 8.9775040 8.9555497 15.7576465 10.4435701 9.3749260 8.7810744 1.9284272 15.0113190 8.1210786 11.8355387 11.0698108 9.6890346 9.3808219 8.5133960 10.6940156 -0.44005000 0.38718000 0.38584000 0.44376000 0.47650000 -0.43648000 0.02258500 -0.00871460 -0.49009000 0.44732000 0.44732000 0.46502000 -0.47420000 -0.46078000 0.00722170 0.00722170 0.00722170 -0.00664320 -0.00027724 -0.42630000 0.50030000 -0.01615400 -0.53053000 3.65690000 2.30880000 -0.15431000 0.09638000 0.09638000 0.78331000 -0.51775000 -0.44005000 0.00000000 -0.47649000 -0.43648000 0.05480300 0.48199000 -0.44070000 -0.49514000 -0.43518000 -0.45292000 0.44935000 0.45412000 0.44732000 -0.44372000 -0.46172000 0.00513590 0.38452000 -0.46078000 -0.46208000 -0.02395100 -0.02648000 -0.00664320 -0.00027724 -0.00027724 -0.41223000 -0.01450300 -0.46218000 0.03157700 -0.52483000 -0.53449000 -0.93873000 -0.15431000 0.09638000 0.83019000 -0.43246000 -0.49057000 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 -0.469 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 -0.469 8.9806134 13.4495431 4.4430098 9.5917374 6.0868623 11.2075465 5.0983564 NA 9.3808219 7.9348597 NA 7.7685370 2.9284272 10.8219516 9.4156993 6.6524607 7.6679730 9.4463840 12.0075372 12.6694188 9.7401614 6.9728270 11.0283447 2.8215266 7.9316500 10.1565650 2.7060442 NA 13.3016093 1.9284272 11.2878693 12.0062029 7.4742251 8.5557069 8.4339613 10.5462944 6.5304688 5.4430065 1.7060221 2.5805073 8.9991293 10.0488564 11.8834606 1.7060221 8.3040935 8.4653746 10.0082992 5.3305333 10.0846972 -0.8788519 9.0796312 3.8759668 4.2085407 9.1191048 7.8008753 6.6288727 9.3059539 7.7649346 8.8075790 2.2910141 13.0270296 0.7060221 11.3105943 NA 8.2111909 4.6756692 7.0037214 7.8005589 11.875329 7.831885 8.024960 17.570336 9.419141 10.324427 12.562596 10.040687 9.292468 9.879302 13.183799 7.465375 8.330532 8.709793 4.406482 8.536820 10.824117 11.354998 5.387866 7.941258 8.483022 8.606908 10.614449 7.789963 8.340247 10.494488 7.270826 1.121082 8.431691 9.243363 10.008299 11.200897 6.504782 10.934459 8.574349 6.869272 9.106920 10.243907 10.959889 9.740382 11.052555 7.483022 3.369006 8.876951 8.168202 7.842177 10.111892 6.882630 11.847297 9.562985 7.354698 12.622667 10.007537 10.137190 12.068167 11.257749 10.408214 2.291014 TCGA-3C-AALJ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 1 1 1 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3200466 5.7165492 5.3179986 11.7362348 0.8585381 9.1939575 NA 8.9618551 11.5987696 9.8083939 9.9736108 6.8010823 8.3860444 9.9644757 8.3138943 9.2117141 10.1416555 10.1984172 6.8697949 3.5590023 12.1442584 9.8543344 13.1024850 9.7212047 9.1183104 10.2401101 7.5167787 9.3241335 1.8585778 1.4435536 8.3938426 11.0203290 12.3304786 7.8864733 13.4344609 11.6122018 9.3403667 6.3663624 3.5590023 6.1804960 8.4472820 9.5274522 7.4054615 12.1737168 -0.1414619 10.1612061 13.3237510 NA 9.7212047 11.3378422 9.0334929 7.5167787 -0.1414619 14.1313778 11.5247912 2.4435271 7.1984175 NA 5.3821277 9.0557840 9.3918970 8.6432021 10.1804953 9.9233100 9.9500026 0.8585381 10.3373368 10.9526449 6.6529826 6.6134550 -0.1414619 9.4566197 14.6147586 10.4944939 10.0545545 9.9273455 8.3938426 1.4435536 6.5024229 6.7533852 7.7594342 9.9697029 NA 6.7040572 8.1577754 9.7818947 10.5301083 8.1485859 6.3504195 5.0680215 9.6529831 11.8465417 8.8098520 13.4454070 5.2161211 7.3423832 12.5873381 12.5672200 12.3554210 8.4695922 10.4677459 10.6651168 10.0655815 10.4528918 4.0284896 8.7922580 11.3190231 11.6550124 0.8585381 10.3977261 8.1759796 -0.1414619 3.4435271 8.6562286 10.3322729 9.9260016 8.9826885 15.7774304 10.8308291 10.5398056 7.9300294 1.4435536 14.1362905 3.7654605 11.2621119 11.1300303 10.4668220 9.5380473 8.1017409 10.2472949 -0.3235600 0.0833420 0.4121200 0.0000000 -0.1447700 -0.3166900 0.0126550 1.1985000 0.0375000 3.6569000 -0.7089000 1.1520000 0.0342540 0.0587950 0.0146090 -0.3206500 -0.3206500 0.0228650 0.3785800 -0.3161100 1.6240000 -0.3273900 -0.6557500 1.0898000 1.4188000 -0.3218600 0.0052749 0.0052749 3.6569000 -0.3235600 0.0380650 -0.3907300 0.0000000 -0.3264600 -0.3308700 0.0249690 0.0249690 -0.1379400 -1.0618000 0.0314360 0.2113100 -0.0027707 1.3732000 0.0336900 0.0277780 0.3851800 0.4294000 0.0096623 0.8211800 0.0146090 -0.3206500 0.0248290 0.3733100 0.3706800 0.0238470 -0.6980900 -0.3273900 0.0084743 -0.6944100 -0.6702100 0.1713600 -0.3151700 0.0052749 0.0199230 -0.3308700 -0.6923500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.315 0.000 0.097 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.343 -0.343 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.315 0.000 0.097 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.343 -0.343 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 8.9433755 13.5994020 5.2161211 10.4284228 4.0284896 11.5611728 3.7654605 NA 9.1159550 7.5024237 NA 7.8069343 2.1804980 10.4303199 9.5345243 5.2161211 8.5659265 9.3118378 8.2117141 10.5042256 9.2579733 7.6914574 11.6655195 1.8585778 7.6914574 9.9500026 2.4435271 -0.1414619 10.6667269 2.6659157 13.0406511 12.4454070 7.1714500 9.6835259 7.6659221 10.4397678 3.9460290 2.6659157 -0.1414619 4.3179986 8.9002265 10.1253538 9.0655815 4.5590084 11.1792888 8.6626983 9.6707446 5.1804940 9.4284228 -0.1414619 8.8156692 4.0284896 5.3504195 9.7015303 7.0055684 5.9246558 9.5398056 8.5060255 7.9353825 1.8585778 13.8135813 1.4435536 11.0987623 NA 8.5024233 4.9029611 7.1804950 8.7503509 13.214481 7.480619 8.620118 13.434461 9.950003 10.239028 12.173717 12.180495 8.678746 9.795205 12.481534 10.246584 7.759434 7.940716 3.028498 7.606760 11.540245 11.6155404 6.0483910 8.4359961 9.3860442 7.6464694 10.5576537 7.5520542 9.6961952 9.7212047 7.8185694 NA 9.2050809 9.1475486 10.1124147 10.7149928 7.8697943 10.7343166 8.2764199 6.4284222 8.6432021 9.9029613 10.3574164 9.6250962 11.1537622 7.9981188 -0.1414619 9.6847662 7.3504203 7.2422719 10.5301083 7.9192632 12.1546230 9.6529831 7.3982691 13.8556585 10.1183105 9.7579241 11.6533892 11.0728863 10.3220916 2.8585580 TCGA-3C-AALK NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0518068 7.7380098 7.3154974 11.4549156 0.7267440 9.6336731 0.7267440 9.2937880 11.7590005 9.4899948 9.8411756 7.2306084 9.0677452 9.5429663 6.9116580 8.6867845 10.8244855 9.8790673 7.0755102 2.7267876 11.7411518 11.1951520 13.2535263 11.4943463 8.9029557 10.1153380 6.3849944 10.1933689 -1.2733431 3.9362327 8.2985351 11.9357789 12.7798599 7.1984578 15.1366209 12.9416328 9.8515501 6.6692975 4.7040641 6.9888778 8.2365577 8.5675603 8.5421659 12.8439386 2.5341363 10.7915253 13.0969931 2.6336637 9.8219619 10.8202001 8.2226375 5.9841701 -1.2733431 13.8083604 8.9423154 0.7267440 8.4202693 -0.2731688 5.2503439 9.2226375 10.0288502 8.5195730 11.6189458 9.6567806 10.6280265 2.1862153 10.8002547 10.6392977 7.9507839 7.2065631 6.0931038 11.5103947 15.1972825 9.2675402 10.2875930 10.1034506 9.0271350 2.8966981 7.2105983 8.4799993 8.3488344 11.3180711 -0.2731688 6.0843343 7.3524911 9.5089618 10.8743055 7.6124786 5.3849926 4.5596754 9.9657843 11.8688896 4.3414948 13.7059844 6.9313533 7.2266280 12.8847610 13.7285426 12.6568730 7.8967078 10.6918453 10.7918620 10.2678792 10.9066916 4.0487070 9.2025159 12.4143769 12.3042114 NA 10.6002266 8.5533309 1.7267876 4.1865402 9.3841010 10.4699339 10.2828095 8.7408031 15.3733944 11.1761892 8.9239992 8.9580037 3.6336753 16.0267954 9.9711463 14.0978445 11.9350169 9.7962322 10.0848842 7.8431265 10.3999900 -0.0232920 0.5887300 0.6170400 -0.0161540 -0.0576540 -0.0326590 0.0231450 0.0133530 0.0133530 0.0263730 0.0263730 0.0263730 0.0141900 0.0141900 0.0178620 0.0232860 0.0232860 -0.0021507 0.0000000 -0.0195890 -0.0153290 0.0252780 -0.6439600 2.9314000 1.6935000 -0.0311090 0.0092120 -0.0143660 0.0315770 -0.0232920 -0.0232920 -0.0069195 -0.0576540 -0.0246610 -0.0286280 0.0192230 0.0188030 0.0133530 0.0133530 0.0133530 0.0114000 0.0141900 0.0263730 -0.0221950 -0.0221950 -0.0221950 -0.0221950 0.0141900 0.0141900 0.0178620 -0.1721500 -0.0021507 0.0000000 0.0000000 -0.0195890 -0.0153290 0.0252780 -0.6359000 -0.6439600 -0.6405700 -0.0121050 -0.0168410 -0.0314010 0.0315770 -0.0526660 0.0195030 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2688470 14.0632891 6.5533313 10.4193980 3.9362327 11.5433663 2.8966981 -1.2733431 8.6911234 8.3004299 NA 7.6983261 3.5847581 10.4512963 9.5963763 2.9747128 8.8560657 9.0328442 11.3874470 11.7501904 9.6831152 7.1738660 10.7584837 1.9424582 9.8967075 10.6280265 5.0843364 NA 11.4538521 2.9747128 12.7027200 12.3124493 7.8353070 9.5932888 8.4045021 9.8567095 4.0843364 0.7267440 1.3117356 9.3588690 8.9252274 10.4530007 9.3715401 4.0487070 9.3847352 7.2385356 9.7232560 5.7267822 10.6604732 NA 10.7090631 3.8560694 4.2186339 9.3311041 7.1448040 5.9066910 9.0799293 7.7874782 10.1948974 0.7267440 13.9422018 -0.2731688 10.2581640 NA 9.2414965 5.7267822 7.6838845 8.7040624 14.305186 5.468251 8.258164 15.136621 10.101654 10.396996 12.843939 12.010450 8.918496 10.001161 13.075856 10.457253 8.348834 9.559672 0.726744 7.660473 10.845075 11.390563 6.384994 8.551741 8.984170 7.210598 10.206229 6.993569 6.771176 11.494346 8.453001 4.974708 8.496621 7.105597 11.855260 10.411531 7.923631 9.764329 10.629158 6.615525 8.519573 10.415033 10.586317 10.019104 10.489580 8.559673 NA 9.861055 7.760921 7.182109 10.874305 8.171797 11.016225 9.965784 7.182109 13.901474 10.147795 9.938671 12.073158 11.697787 9.394781 1.726788 TCGA-4H-AAAK NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.2050913 6.0341255 6.7503332 12.0478201 1.5746828 9.9822655 NA 9.4388804 11.6777946 10.2024886 9.8354457 6.8388018 8.8771700 9.1160674 6.9372643 7.9792274 10.7403190 9.5462378 7.8117337 1.5746828 11.6266799 10.9648631 9.3228869 10.9294158 9.3400395 10.3546480 5.7331238 10.0819225 -1.2327690 1.3523066 8.2019675 11.4120968 12.6635770 7.0200043 13.5789146 12.3021285 10.4630026 7.3409868 4.3820516 7.5907068 8.2390147 9.7848437 8.9719105 12.7312288 2.0892608 11.1144069 13.7801820 5.0152656 9.4406659 10.6453901 7.3064983 3.5746949 NA 13.5081351 10.0399166 2.9372691 8.7813597 NA 3.3523066 9.7917864 9.7510454 9.0469499 10.7120513 9.8421496 10.4242110 1.3523066 10.9484915 10.7803129 6.6253202 6.9961582 3.2267705 10.9907376 15.1329099 8.5451205 10.7715597 11.0985361 7.8253309 3.0892608 0.3523066 8.6002292 8.6802287 11.0841864 0.7673158 5.9767921 7.2631941 10.3602634 10.7645188 6.1336622 5.8226205 5.0711191 9.9062510 11.8859560 NA 13.5347478 5.2591934 7.4952594 12.6074287 14.5410709 12.7028726 8.2102827 10.5738888 10.9837820 10.4534020 10.9256334 4.3820516 8.7687474 12.6223050 12.3700381 -1.2327690 10.3113377 8.8048861 -0.2325994 3.6283070 9.3343446 10.5355235 10.1628734 8.7841476 14.7735119 10.7043451 9.1618020 8.2810667 2.7673370 15.6805325 9.6682060 13.4409244 12.7295123 10.0960142 9.9170863 7.8758636 10.1447071 0.0000000 0.0000000 0.0000000 0.0044056 -0.0028728 -0.0039524 0.0338310 -0.0193140 -0.0102320 0.0171240 0.0171240 0.9727500 0.0085432 0.0207420 0.0016590 0.0016590 0.0120970 -0.3437700 -0.0149160 0.0232860 0.0356650 0.1049700 0.2889700 0.2889700 0.2889700 1.1270000 0.2951700 0.2951700 0.0287630 0.0000000 0.0000000 0.0428740 0.0088920 0.0160060 -0.0056757 -0.6381200 0.0209930 -0.0193140 -0.0150250 -0.0102320 -0.0036011 -0.0036011 -0.6626300 0.3251100 0.3251100 0.3251100 0.3259200 0.0207420 0.0372170 0.0137720 -0.6520200 -0.3437700 -0.0149160 -0.0149160 0.0048459 0.0356650 0.0072217 -0.6683600 -0.6687300 0.2889700 0.0133530 -0.7005500 0.2951700 0.0303100 -0.0135400 0.0127950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 9.9943534 14.3185668 9.0093223 10.6553214 1.5434464 11.0358813 1.9372691 0.3523066 8.5938878 9.5088062 NA 7.3273281 3.4677751 9.7171659 10.3742070 2.9372691 8.5054317 8.9068906 11.5871192 10.3751319 9.1707240 7.8494883 10.7542478 2.9372691 9.6824716 10.4242110 3.6742346 NA 10.9761832 2.3523066 12.4917465 12.1237912 7.6002296 9.8823829 9.5544256 9.9139080 6.0982553 0.3523066 1.3523066 2.8547936 10.6610199 9.5045866 9.5404785 4.1248905 8.2207541 7.7069187 9.9651703 4.5222253 9.8620768 NA 11.6678287 3.3523066 4.0152656 9.4754145 4.9911499 4.8334265 9.3228869 8.1830810 6.7331238 -1.2327690 13.7927816 0.7673158 10.2149391 -1.2327690 8.2144226 4.9170880 7.5907068 9.1038459 13.1975539 5.8226205 8.2410450 13.5789146 10.3705019 10.0773839 12.7312288 11.7606315 8.9596319 10.1920304 12.9052910 12.0145250 8.6802287 9.5544256 0.7673158 7.3560540 10.6940058 11.491213 6.721535 8.566621 9.162873 8.553609 10.881296 7.286975 5.275134 10.929416 8.352302 6.865371 8.821265 7.195825 11.419288 10.571470 8.628426 9.304558 10.332441 5.124891 9.046950 10.432675 11.046369 10.206651 10.657984 8.308436 NA 9.307816 6.878892 6.080223 10.764519 8.159656 11.071120 9.906251 6.744619 14.117830 10.132021 9.645390 12.899759 11.077668 9.645390 1.574683 TCGA-5L-AAT0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.9894958 6.7302854 6.7222925 11.4910654 0.8154115 9.5285024 NA 9.1933359 11.5175750 11.9500426 9.3284719 7.2965290 9.0216027 9.8643433 7.9685320 9.3674309 10.5945745 9.4913593 7.9583601 2.4003740 11.7811866 10.6556558 12.3696714 10.6179187 9.4604602 10.3571443 7.4783676 10.1000336 1.2304490 2.9308887 8.2830078 11.6567046 12.8800328 7.1846364 13.2002760 13.2000961 9.9204377 6.9446851 2.9308887 7.3231971 8.3903113 9.3506778 8.5204588 12.6168412 NA 11.3032424 14.0111846 5.7850274 9.1562168 10.5512404 6.3284721 5.3801857 0.2304490 14.3703936 12.5142488 1.2304490 8.9326125 0.2304490 3.3178974 9.5680618 9.5934795 9.3311021 11.8081047 9.5285024 10.2700444 6.7222925 10.7652290 10.4983969 8.0248554 7.3389645 0.2304490 11.5619166 14.9649378 8.4392836 10.3795518 10.5290752 8.4251966 2.5523771 2.9308887 8.5747358 8.4496084 11.4069247 -0.7695510 5.3801857 7.1904420 9.5534945 10.6408912 7.0946256 6.0377951 5.1846374 9.8957758 12.0446217 2.4003740 13.0980081 5.5342204 6.9028647 12.1962241 13.4952489 12.5451646 9.3179025 10.5802739 10.6888464 10.5148244 10.8670644 4.0377951 8.9377990 11.9691654 12.1758836 1.5523771 10.4556473 8.4759924 2.5523771 4.0889218 9.8679704 10.5244861 10.0538071 9.0117995 15.0801381 10.1290412 9.0297215 9.0019292 3.1373232 15.9696535 9.6775230 13.1477187 12.3746201 9.9204377 9.9919910 7.8922180 10.5650539 0.0061090 0.5546000 0.5458800 0.0087528 -0.0018014 -0.0154660 -0.0079335 -0.0047079 -0.0047079 -0.0018014 -0.0018014 -0.0018014 0.0047847 0.0047847 0.0000000 0.0000000 0.0000000 -0.5566700 0.0010299 -0.0067813 0.0037465 0.0165650 -0.5483400 0.0195030 0.0195030 0.0308730 0.0308730 0.0408920 0.0220240 0.0061090 0.0061090 0.0016218 -0.5376400 0.0122370 -0.0154660 -0.0079335 -0.0079335 -0.0047079 -0.0047079 -0.0047079 0.0014151 -0.0031008 -0.0018014 0.0037465 0.0037465 0.0037465 0.0176840 0.0047847 0.0144700 0.0000000 0.0079175 -0.5566700 0.0010299 0.0010299 -0.0067813 0.0037465 0.0165650 -0.5509600 -0.5483400 0.0195030 0.0030522 0.0308730 -0.4951700 0.0220240 -0.0097473 0.0245480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.7926823 14.4458970 7.6482921 10.6551310 3.4745658 10.5680618 4.4003671 -0.7695510 9.0410116 8.9446854 0.8154115 8.4925346 1.8154115 9.8331387 9.6195333 2.5523771 8.1130826 8.9617587 9.3192280 10.0899746 9.7699185 7.4544416 10.6103597 3.7540002 8.3099247 10.2700444 4.3179046 -0.7695510 10.8579737 4.6227547 13.3900747 12.3839919 7.9853274 9.8570615 8.3045813 9.5193058 3.7540002 0.8154115 NA 3.9853274 9.3192280 10.2576547 9.4688446 4.6567023 8.0552076 7.1130826 9.7792617 4.1846374 9.5216105 -0.7695510 10.7112301 3.3178974 4.0377951 9.6281892 6.3992617 5.1130837 9.8488252 7.6567044 7.5702899 -0.7695510 14.0250587 0.8154115 10.2332549 NA 8.3877869 5.4398924 7.7342652 8.9549535 12.960444 5.656705 8.221962 13.200276 10.282328 10.186090 12.616841 12.366309 9.049022 9.640891 12.832211 10.631319 8.449608 8.592383 0.230449 7.601127 10.700590 11.2378176 6.4688439 8.8488254 8.7773342 7.6271304 10.4377714 8.2965290 6.9853274 10.6179187 7.5019025 4.5523709 8.6650680 6.5331241 10.2843657 10.3311021 7.1552524 9.0458230 9.8634350 7.0821884 9.3311021 10.6467095 10.7608462 9.7262948 10.3467837 8.3389641 -0.7695510 9.8270675 6.5791681 7.1611772 10.6408912 7.1252574 10.8675809 9.8957758 7.0704623 14.3079599 10.4171731 10.2507254 12.4125237 11.3887339 9.9169404 0.8154115 TCGA-5L-AAT1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 1 4 2 4 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.117435 5.834147 6.512219 11.257534 1.704872 9.049161 -0.295128 8.696387 11.079904 9.504146 9.454734 7.605731 8.101469 9.934885 7.071187 9.345110 10.137407 9.553488 7.659061 4.097181 11.214145 10.986215 10.775657 11.017180 9.174507 9.989110 8.156076 9.905763 NA 6.716092 8.489500 11.062966 12.266153 6.537754 13.687056 12.401615 10.004073 7.439574 2.704872 6.971652 9.341489 9.791001 8.079904 12.745668 1.704872 11.048606 12.714518 4.792330 10.279666 10.260413 5.834147 7.180598 NA 15.401056 11.907852 1.289834 8.419110 -0.295128 4.228426 9.515436 9.476354 9.437880 8.889740 9.906989 10.120606 2.026800 10.143657 10.143657 6.459753 8.147808 10.432785 10.193709 14.533100 7.512413 10.407903 9.330574 8.770954 2.704872 5.196717 8.741038 8.556614 10.643709 -0.295128 4.990265 7.079904 9.368423 10.424254 8.270919 6.446332 6.228426 9.731388 11.592466 2.026800 13.520748 7.370201 7.834148 11.374636 13.075280 12.477592 8.151948 10.391365 10.496028 10.176540 10.439574 3.704861 9.192705 11.565952 12.046662 -0.295128 10.477179 8.757433 2.026800 4.939443 9.565952 10.913099 9.364861 8.762856 15.112597 10.042487 9.066808 7.971651 2.289834 15.512622 10.174507 12.885396 12.648295 9.487863 9.677845 7.188681 10.352755 -0.00152430 0.39894000 0.39894000 0.00013863 0.00013863 -0.00110870 0.00458000 -0.00027724 -0.00027724 0.00000000 0.00000000 0.00000000 0.00263570 0.00263570 -0.00166290 -0.00166290 -0.00166290 -0.00263220 -0.00263220 -0.00193990 0.00152550 0.00499690 0.00513590 0.00513590 0.00513590 0.00000000 0.00000000 -0.00451570 0.00485790 -0.00041585 -0.00152430 -0.00087907 0.00013863 -0.00110870 -0.00110870 -0.61958000 -0.00124730 -0.00027724 -0.00027724 0.00087206 -0.37628000 -0.00290910 0.00000000 0.00097064 0.00097064 0.00097064 0.00097064 0.00263570 0.00263570 -0.00166290 0.00346870 -0.00263220 -0.00292710 -0.00292710 -0.00429290 -0.00667260 0.00499690 -0.41300000 0.00513590 0.00513590 0.00344130 0.00000000 0.00000000 0.00485790 -0.41366000 0.01153900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.006361 14.618689 5.834147 9.987953 5.002423 10.346916 3.164304 -0.295128 9.190694 9.758791 NA 8.228427 3.874787 10.419969 9.533001 3.164304 8.315890 8.909436 10.258494 10.759469 9.598439 7.139493 10.864105 3.405298 7.813389 10.120606 2.704872 NA 11.077730 2.874797 13.128506 12.283709 8.779006 9.656150 9.601197 9.845695 5.228426 0.704872 1.289834 11.334221 9.357710 10.134272 10.300122 4.512221 7.552611 6.760148 10.565952 5.319575 9.408768 NA 10.240140 3.874787 4.097181 9.424835 6.259453 5.770953 9.551922 9.270919 10.363076 2.026800 13.988460 0.704872 10.355916 NA 8.236246 5.834147 7.823806 9.160192 10.980978 5.026791 8.341489 13.687056 10.389613 10.947443 12.745668 10.654691 8.884774 9.857150 12.985491 10.157106 8.556614 8.911879 NA 7.274720 10.261371 11.123771 6.131128 8.966960 8.724456 6.980990 10.126688 8.629677 7.721673 11.017180 7.556614 0.704872 5.659060 7.150045 11.270443 10.730004 7.787972 9.278512 8.151948 7.693550 9.437880 11.017748 10.412224 9.641503 10.410497 7.802897 -0.295128 10.390498 5.813389 7.605731 10.424254 7.156076 11.028483 9.731388 7.122717 14.184077 10.558174 10.750624 12.904537 10.858417 9.611755 0.704872 TCGA-HN-A2OB NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.503025e-07 2.781139e-08 10.8457862 9.4578680 7.1642563 11.7245108 2.4318101 10.2588837 -1.1532861 9.6733918 11.8021299 8.9356315 9.8411967 7.4204900 9.4615531 10.2137118 6.7233606 9.0672216 10.5845131 9.6582179 7.8298369 1.1687704 11.2668034 10.6420712 10.5747637 11.5141766 9.4670630 10.2477226 5.1687704 10.2933993 -0.1531256 1.8468343 8.4448956 13.0731801 12.9520970 8.4996881 13.8173536 12.8414618 9.9851150 6.5610893 3.0947766 8.2710096 8.5628053 9.4969973 8.7110292 12.6305577 4.5192714 10.2054944 12.8902978 5.9129324 9.2188594 10.4033492 10.0230163 4.5747615 NA 13.7832194 8.3762739 2.4318101 8.9683768 0.4317834 5.0947723 9.7225926 10.1065865 9.2466551 11.6308645 10.1159699 10.4033492 3.5472771 11.2662768 10.6363768 7.2562342 7.6445045 12.3520345 11.2372809 15.0457486 8.1910059 10.9136051 11.1127512 7.6733918 1.8468343 3.0947766 8.3386963 9.0623762 12.1834892 -1.1532861 4.2043990 7.5576498 9.6355616 11.3679528 12.3441961 5.3225772 5.6670235 10.1083505 11.8450810 2.3062622 13.4314535 5.9129324 6.8524683 12.7852283 12.5234615 12.6598227 8.5350934 10.4934020 10.8510637 10.6680990 11.2115251 5.0366660 8.7716558 12.0010284 12.0946224 -1.1532861 10.4789297 8.8926029 1.4317834 4.6213662 9.7477100 10.3738314 10.1738344 8.9709646 14.3054741 10.3072991 9.3615572 8.4925018 4.9965921 15.6288304 10.2877124 13.7735098 13.2365418 10.0774641 9.9831936 8.1206386 10.4065644 0.2045700 0.2045700 0.2045700 -0.0018014 -0.0058095 -0.0043777 0.1206400 -0.0020784 -0.0020784 1.1275000 0.0093098 0.0093098 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.0034627 0.0026357 0.0026357 0.0130740 0.0130740 0.0130740 0.0126550 0.0126550 0.0126550 0.0127950 0.2045700 0.2045700 0.0065262 -0.0058095 -0.0043777 -0.0031859 0.1206400 -0.0030950 -0.0020784 -0.0020784 -0.0020784 0.0000000 0.0000000 -0.1695500 0.0049969 0.0049969 0.0049969 0.0049969 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.4623800 -0.0034627 0.0026357 0.0026357 -0.4431200 -0.4206800 0.0130740 0.0061090 0.0126550 0.0126550 0.0127950 0.0062481 0.0234260 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 9.1218036 14.1573850 8.1042313 11.3101121 3.7537329 11.0912071 2.8468343 1.6542064 8.6525872 10.1850225 -0.1531256 9.2142579 4.0167726 9.5228002 9.4166987 2.0167816 9.2928926 9.4467560 10.8709440 10.7458225 9.6052163 7.6828935 11.1639731 2.6542064 9.3860019 10.4033492 7.5263232 NA 10.9004298 4.0947681 12.8245703 12.0397524 8.1710236 9.9857549 7.1229677 9.2562342 5.7172076 1.4317834 1.1687704 3.6541949 9.0428306 9.7589840 9.6412592 6.5610893 8.6684259 6.7233606 9.6598227 6.4762002 9.5201523 -0.1531256 11.7891744 4.6797334 7.1414645 9.5118149 5.8733112 4.6282020 9.1698980 7.9940479 7.2562342 NA 13.7567832 0.8468744 10.3072991 NA 8.3684436 6.7355858 7.7172082 8.9369556 12.4660315 3.7537329 8.7981280 13.8173536 10.2375496 10.1749571 12.6305577 12.2167132 8.9356315 10.5148418 12.9433113 11.4698101 9.0623762 8.0804631 0.4317834 7.1414645 10.6781504 11.800676 6.526324 8.512179 8.439300 7.046515 10.519176 6.759732 6.896692 11.514177 7.374321 2.934309 8.152905 4.724830 12.367462 10.359090 8.496100 8.896692 11.794845 5.588310 9.246655 10.350172 10.937617 10.697030 10.529838 8.846843 NA 9.777144 7.784011 6.416700 11.367953 7.673392 11.177942 10.108351 7.213165 14.265651 9.802493 10.291341 12.633215 11.451165 9.839782 3.239154 TCGA-EW-A6SC NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 2 NA NA 1 3 2 2 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.9712250 8.0052147 7.8924845 11.1492395 -1.2522259 10.3091146 0.3327366 10.0274372 11.6989291 9.6471835 9.9886179 7.6335228 9.0157836 9.1042785 7.5060497 9.3505255 10.4189253 9.9413520 7.6726389 3.9177563 10.9444287 9.8085225 10.0736941 11.6852004 8.7478264 10.4926604 5.3176839 10.3583855 NA -0.2522259 8.3826374 11.5696006 12.7089145 7.2276073 12.5340962 12.5686039 9.8969386 6.7922203 4.6058084 7.3551573 8.2753037 7.9177516 8.1529682 12.2629104 1.9177373 10.4663595 13.7911103 4.6785621 9.2363094 10.4960195 7.4620720 7.0424474 -0.2522259 13.6157848 11.5102086 NA 8.6815171 NA 4.1053764 9.9271136 11.5834823 9.7908538 11.0265664 9.9975326 9.7492347 1.9177373 11.2811563 10.5304153 6.7421801 7.3625365 8.5027141 12.0140275 14.5736549 8.7176593 11.1374579 11.0590073 8.4237836 1.5551781 3.8352875 8.2674628 9.0798631 11.3746764 NA 5.2072565 7.5519574 10.9428912 10.9654814 9.7771138 6.0424474 5.1907689 10.5336877 12.0421601 4.2713883 13.6123997 6.0332292 7.5060497 11.8412442 12.2168324 12.9769458 8.9621458 10.6681794 10.8085225 10.5790388 11.1225944 5.0146142 8.7840001 11.3882975 11.8800050 -0.2522259 10.5442719 8.8937587 -0.2522259 4.0335992 8.7562551 10.0116826 10.1535000 8.6666899 15.0452624 10.1808904 9.0584393 8.7350906 2.0697709 14.3220357 8.1593375 13.4187041 11.6403694 9.9239998 9.8758209 8.1465702 9.5846266 0.0158660 0.0158660 0.6137100 -0.0026322 -0.0026322 -0.0076101 -0.0030475 0.0011093 0.0011093 0.0024969 0.0024969 0.0024969 0.0109660 0.0134920 0.0066653 2.7142000 -0.6316900 -0.6271300 0.0000000 0.0019418 0.0408920 0.0195030 0.0370760 0.0387710 0.0321400 0.0296060 0.0296060 0.0296060 0.0274970 0.0158660 0.0158660 0.0144700 -0.0026322 -0.0076101 -0.0215110 -0.0030475 -0.0030475 0.0011093 0.0011093 -0.0112040 -0.0060745 0.0019418 0.0024969 0.0114000 0.0114000 0.0114000 0.0114000 0.0134920 0.0821880 0.7128300 -0.6424600 -0.6371800 0.0000000 0.0000000 -0.0036011 -0.5922400 0.0195030 -0.6738900 -0.6276000 -0.6217900 0.0105640 0.0296060 0.0296060 0.0274970 0.0136320 -0.6334400 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0134416 14.7845368 9.2316424 10.7587043 3.0697537 10.9051735 2.7478170 0.7478600 8.4096048 8.7674174 -1.2522259 7.9465174 4.1401406 10.4051451 9.6689236 2.7478170 9.5901770 9.3384137 10.3780937 10.1714678 9.4463836 7.3100692 10.9880216 2.3327938 8.9462718 9.7492347 5.3625365 3.9572832 11.3999994 4.6058084 12.0500371 11.9264914 8.1845382 10.3143563 9.1020760 9.3072038 3.9957558 2.3327938 -0.2522259 8.0004919 8.8085225 9.4757470 9.3374776 4.8975744 6.9655419 6.8873778 9.8912099 5.6304695 9.6888741 -0.2522259 10.8279779 4.4482667 2.9177563 9.7455565 7.0167660 5.2396806 10.1814121 7.6874058 7.9981250 -0.2522259 13.4374970 0.3327366 10.2103288 NA 8.1529682 5.2713883 8.0447427 8.8835359 15.041193 5.937650 8.144431 12.534096 10.011096 10.506466 12.262910 11.961994 8.344016 10.148172 14.215209 10.988320 9.079863 8.905174 2.835298 7.672639 11.282373 11.265004 8.096555 9.857004 9.308159 7.722241 11.004472 7.317682 6.489294 11.685200 7.290858 2.654710 6.215432 7.689930 10.955146 10.401120 8.933941 9.786060 12.204823 6.455186 9.790854 10.179846 11.325963 10.532870 10.300496 8.525904 NA 9.076232 7.559715 6.255622 10.965481 7.427307 10.748179 10.533688 7.792658 13.633475 10.589391 9.702023 11.869522 11.019290 9.429065 1.069771 TCGA-AC-A7VB NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 3 NA NA 1 1 3 3 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0263489 5.1220887 7.5892137 12.4035208 0.2272482 9.6318791 -1.7725053 9.1083838 11.7388989 10.4617878 8.7885578 7.8438187 8.6313470 9.9929702 6.7586510 9.2095504 10.9792322 9.0648977 6.2440784 3.6195891 12.0068865 9.1076186 12.7905852 9.5968671 10.4958118 10.3153954 2.4751887 9.9211922 NA -0.7727518 6.0086303 11.1407202 12.8571386 4.7030010 14.7510002 12.3218423 9.5946846 6.4318402 3.2272636 7.2131120 8.1505972 9.2223303 5.3040839 13.4484792 6.7271159 7.7605995 14.6499095 1.9277069 9.4590729 11.6965300 6.7429696 6.4893647 2.3972006 14.4741317 5.5033933 -0.7727518 6.8009167 NA 3.3565523 10.1148711 8.5241859 8.5748913 9.0281696 10.0569925 9.1872716 -0.7727518 10.9135514 10.6874696 7.1901654 7.6743533 2.5492009 11.2665315 13.5800374 9.4278129 10.3996973 10.5036850 6.5979572 1.2272482 8.1416550 8.6928362 8.5693445 9.6125930 NA 6.1988124 7.7449394 9.8733784 10.5581866 5.0346251 2.7508423 2.6195773 9.2349980 12.2072308 7.4342838 13.4772350 7.2933585 8.1697842 10.6704723 11.8303165 12.9704211 7.9568907 10.6574609 10.3371004 10.4187670 11.1352870 5.2045516 8.6398396 11.3644210 11.8117625 -0.1877072 10.1675834 8.2202080 1.0346383 4.0384801 8.4987327 11.0165996 9.4590910 9.2551757 15.1081805 11.1870906 9.3047531 8.7141047 1.0346383 14.9157250 6.1281366 10.7571883 8.9509306 10.3968816 10.0968636 7.9517836 10.3611665 0.00152080 0.00152080 0.79050000 0.00558830 -0.00992130 0.00000000 0.01967800 -0.00340370 0.00058991 3.65690000 -0.84225000 1.53330000 0.02514500 -0.00079631 0.00642260 0.03854800 0.82123000 0.01813900 3.65690000 -0.85478000 0.86538000 0.01911800 -0.83120000 0.83063000 0.83063000 -0.78115000 0.03245800 0.03245800 0.02393400 0.00152080 0.00152080 -0.01019700 -0.87555000 0.00000000 0.00558830 -0.00987000 -0.01240300 -0.00340370 0.00058991 -0.00812730 -0.00268880 -0.00093488 -0.86024000 0.00556370 0.00556370 0.01182200 0.01182200 -0.00079631 0.00976310 0.00642260 -0.86874000 -0.86111000 -0.86285000 -0.86285000 -0.85478000 -0.85184000 0.01911800 -0.85359000 -0.83120000 0.83063000 0.02388200 -0.79451000 0.03245800 -0.87765000 -0.84889000 -0.83517000 0.000 0.000 0.000 0.000 -0.841 -0.841 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.826 0.000 0.000 0.000 -0.110 0.000 0.000 0.000 0.000 -0.841 -0.841 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.826 0.000 0.000 0.000 -0.110 6.1814664 10.7365499 1.0346383 9.2489437 NA 11.2246257 2.7508423 NA 9.1288909 6.2216239 NA 5.9619798 1.6867022 10.7481340 8.9534879 6.9102638 6.2716647 8.5671199 5.9551896 11.7011023 10.4448609 7.7664289 10.6774500 -0.1877072 8.8084703 9.1872716 3.3565523 1.9277069 11.7496061 3.9821539 11.8224107 12.6106366 6.2716647 9.7370448 10.5892135 10.4934707 4.1814683 3.6867022 -0.7727518 2.9821631 9.2152442 9.7340731 10.8359866 3.7508316 9.5785016 7.1311511 10.1247370 4.8854816 10.5395855 -1.7725053 8.5344706 0.5492256 5.1697847 9.3263875 7.3519083 2.5492009 9.6254791 7.2496378 6.4512721 0.8122107 12.6543861 -0.7727518 10.4686571 -0.1877072 7.5826207 4.7350618 8.0216857 7.8693212 13.580063 6.610975 9.096864 14.751000 9.941086 10.555384 13.448479 13.382207 10.159064 10.569622 11.701736 11.152268 8.569345 8.727116 1.812252 8.535609 10.471336 11.4079560 5.7350645 9.0743272 9.0554064 9.9329021 10.9622291 4.4367215 9.1022511 9.5968671 9.3597695 0.8122107 5.7971245 8.8388478 8.4488568 10.3484794 7.3693766 10.4671666 8.4158588 3.2272636 8.5748913 9.5178646 12.3168858 9.0546125 11.0398482 8.4656746 -0.1877072 9.2441685 5.2606919 3.0852547 10.5581866 2.9277069 11.1268155 9.2349980 8.2016843 13.5920644 10.5025213 9.4769758 12.0853479 9.7985484 9.7808991 -0.7727518 TCGA-AC-A7VC NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 1 NA NA 2 2 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.9929295 5.4079679 5.6955429 11.2728814 NA 7.7717153 NA 8.8460250 11.0513987 8.8302791 8.8827467 6.6868268 8.6446848 11.2012356 5.5684304 7.5152607 5.1533960 10.2408570 9.1165438 4.1784836 12.1512174 11.5013457 6.4600561 9.4791139 9.5299576 10.1350865 3.8440642 9.8596629 6.7799360 1.6424243 8.7778849 11.3439120 12.1868171 8.4651623 10.5047596 4.4497858 12.5346715 6.7042080 1.3204847 8.4211665 7.8002845 8.8731731 9.8808370 5.4290301 NA 11.7288339 6.5872900 0.9055049 10.6091338 3.7799321 8.6105229 4.0209466 -0.6794576 13.9424472 8.7149667 5.2273945 6.6514206 NA 5.8282990 8.8499345 9.1549753 8.8596631 7.7881095 8.9893891 10.3275314 3.8440642 9.3247247 10.4400937 6.1406826 7.1214040 NA 4.5299583 15.6474076 8.0715793 10.1382873 8.9858399 7.6012746 5.3865937 -0.6794576 7.7425688 8.3892824 10.0295879 1.3204847 11.8005370 6.8673986 10.5010349 10.2739731 7.8673986 7.9425561 5.9643594 8.6955436 12.2063911 NA 13.5550971 5.1784836 6.8440655 12.4985465 12.5849467 11.6840914 7.8401403 10.9245940 10.0287259 10.3070573 10.6271355 2.1278644 9.7931949 11.0783108 9.7520017 NA 10.4696161 9.2790568 -0.6794576 8.9227206 8.8002845 11.5945910 10.0475737 8.8979329 14.8262227 10.3607939 8.2213711 7.1970210 -0.6794576 11.0615497 6.7128214 14.1936598 11.7240488 9.8322568 10.8932044 6.9715562 9.8622590 0.5362600 0.5362600 0.3218900 -0.0909610 0.0827650 -0.3269000 0.2071700 0.2274500 0.2381400 0.3649300 0.3649300 0.9614400 -0.3244200 -0.1074900 -0.1409100 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.1577100 -0.2649200 0.0782940 -0.0033142 0.0015391 0.0015391 -0.0178030 -0.0178030 -0.0178030 0.0706730 0.5362600 0.5362600 -0.5538000 -0.0909610 -0.3269000 -0.3162200 0.2071700 0.2071700 0.2274500 0.2381400 0.2082900 0.2741800 0.1766400 0.3649300 -0.2270600 -0.2270600 -0.2270600 -0.1574500 -0.1074900 -0.1074900 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.0198630 -0.1963700 -0.2649200 0.0719240 -0.1584800 -0.0033142 0.0015391 -0.3007500 -0.0689310 -0.0178030 -0.0091286 0.0632230 0.0059700 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 7.4954297 16.0312164 9.2977841 10.8577225 1.9030768 10.1197858 1.3204847 2.7799321 9.6692323 9.9250574 NA 8.3233192 6.5396722 10.0139910 9.5553215 2.7799321 5.5493242 9.5660569 8.6824479 10.4491430 9.0214120 6.3757867 14.1886997 0.3205424 3.4904289 10.3275314 4.3649016 NA 11.5432991 6.2862879 13.8266877 13.5923319 9.7404643 8.9073441 9.4381473 10.6093702 4.2273945 8.4854111 -0.6794576 0.3205424 8.9876156 10.7618922 5.7799347 4.2273945 7.7588388 7.6197123 10.3027848 6.9999842 10.3933067 NA 10.4185363 3.4079645 5.6242852 9.3066733 7.8908534 0.3205424 10.0131197 7.5684320 3.2274022 NA 14.4262899 1.6424243 11.2776062 NA 9.1116670 6.3757867 7.7881095 8.6059065 11.350381 8.784029 8.351171 10.504760 9.780960 10.859178 5.429030 10.819852 9.281954 10.057751 12.504140 12.494494 8.389282 9.449787 6.587290 7.855779 9.465162 11.1533941 8.3063461 8.8789249 8.5636783 8.5872907 9.7083599 5.2512419 4.9643617 9.4791139 11.3872661 2.1278644 7.7383564 9.7454683 12.2810492 10.4847826 8.4778509 10.2386220 5.7634488 2.4904418 8.8596631 10.3338268 9.1753724 12.4523611 10.4191942 7.1406836 NA 10.1697450 7.2529549 8.8922568 10.2739731 11.2360101 10.2333934 8.6955436 7.5636783 15.4618529 10.8208481 10.3899539 11.6653548 11.7504339 9.1326815 -0.6794576 TCGA-BH-AB28 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8521746 7.4277754 6.7497032 11.7239265 1.2578555 10.0298896 0.9947969 9.2236342 11.0611740 10.3270760 10.0716312 8.1546870 8.1404929 9.4994359 7.4607901 9.3497262 9.8920561 8.8365371 6.9065070 2.2578555 10.4003826 10.5627717 12.5864315 11.2774408 8.9112922 10.1637383 6.0991521 10.3811007 -0.3271674 1.9948331 8.5524708 12.2955114 12.7634962 7.9925594 14.1169642 13.4218665 9.6480190 4.9208173 -0.3271674 7.1607276 8.2912729 10.8651804 7.8577627 12.7030374 3.4277805 10.3663745 13.6870388 7.4737877 10.1188593 10.4982439 9.6508828 2.7603487 NA 13.0207850 9.2245958 1.4802651 8.7995921 0.2578555 3.5308698 10.0413940 10.1546870 10.1173848 10.9956607 10.3759260 10.0452085 2.5797836 11.2892066 10.7623380 5.6036263 8.8352789 11.4005953 11.2873674 14.5682735 7.9386434 11.4458206 11.1979189 8.3819712 3.3733280 2.2578555 9.7970088 7.8944746 10.7676250 -1.3269864 4.3167467 7.6924781 9.3310990 10.6997567 4.2875979 6.4673039 4.1964497 10.3377792 11.7651492 1.8428180 13.6519554 6.2727996 7.8251725 13.1188723 12.8238248 12.9421603 8.9385025 10.1988977 10.8586921 10.7966339 10.6558811 5.0991521 8.8277057 11.7145467 11.4842622 -0.3271674 10.3431012 9.1199708 0.9947969 4.0723974 9.7172816 11.3029271 10.4810473 9.0127377 14.6233295 10.5665683 9.4185619 8.6168675 2.3733141 16.0175735 9.7924772 13.2507884 12.3999571 9.8340194 9.8565230 7.8799018 11.1610038 0.00527490 1.05780000 1.05780000 -0.00041585 -0.00470790 -0.00290910 0.03270400 0.00833510 -0.01222000 0.00055459 0.00055459 0.00055459 0.01572700 0.01572700 0.01810300 0.60413000 0.01474900 -0.00650500 -0.00650500 0.00000000 0.01251600 0.02862200 0.02272500 0.02272500 0.02272500 0.01782400 0.01782400 0.01782400 0.04386500 -0.54310000 0.00527490 -0.00124730 -0.00470790 -0.00290910 -0.01574100 -0.00545980 -0.00545980 0.00833510 -0.01222000 -0.01222000 0.00221930 0.00221930 -0.56684000 -0.55747000 -0.55747000 -0.55747000 -0.55747000 0.01572700 0.01572700 0.01810300 -0.56286000 -0.00650500 0.01474900 0.01474900 0.00000000 0.01251600 0.02651400 -0.54784000 0.02272500 0.02272500 0.01737400 0.01782400 0.01782400 0.04386500 0.01167900 0.04287400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 9.2265167 12.7912609 5.2727996 9.8251723 4.4336405 10.5101212 5.8226358 0.6729231 8.8835588 7.8823410 -1.3269864 8.2139839 5.4802425 10.0764322 9.6938674 4.6501671 9.3750603 9.1394738 9.1022944 10.4942629 9.6412592 7.5677052 10.5331986 4.2578479 10.5041948 10.0452085 5.2727996 -1.3269864 10.9252573 2.1323136 12.4551691 11.6274474 7.1727335 10.3741940 8.5417100 9.4084435 3.3167395 2.7603487 -0.3271674 2.9208078 9.4219188 9.8403057 9.7576959 4.8428129 10.1636833 7.8527966 10.4745958 7.0127374 9.5593463 -0.3271674 11.4697383 3.9582859 4.0991521 9.3450830 6.2925204 5.8226358 9.2765139 8.1261583 6.9903003 -1.3269864 14.0299927 0.6729231 10.0716312 0.2578555 8.3004212 4.9766661 7.4834595 9.5105156 13.351149 6.352368 8.625629 14.116964 10.662991 11.239655 12.703037 12.096135 9.380186 10.758692 13.251555 12.059019 7.894475 10.229394 2.672878 7.034831 11.700794 10.784023 7.686908 8.919628 8.710435 8.870104 9.454887 8.122036 6.555531 11.277441 6.661573 2.760349 9.006043 7.497942 11.621437 9.828971 8.125396 8.647302 12.547965 6.242743 10.117385 10.164741 11.373544 10.038116 10.226997 7.994816 NA 9.563266 5.994815 7.223634 10.699757 6.331100 10.451507 10.337779 7.457522 14.239061 9.350607 9.668655 12.992419 11.700102 9.642993 2.760349 TCGA-AC-A3EH NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 3 NA NA 1 2 3 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 9.733988e-07 2.781139e-07 11.0883002 3.8592540 7.6567595 11.7004050 NA 8.7124878 NA 9.1143936 12.1248117 8.7786833 9.8688812 7.0329890 9.5065397 9.9712576 6.5383969 8.2499331 11.0174414 9.0999303 6.0889875 2.2742915 9.8112310 11.7129334 8.9963656 10.9855882 8.7604066 10.3147755 5.3857968 10.2835188 -1.5332424 5.7978508 6.7290293 10.2580979 12.0380952 6.0593921 14.1194160 13.7532040 9.0779599 7.8549525 4.7148609 6.5330244 7.2998253 8.2950714 7.6641514 12.7635646 1.2742915 10.0267901 14.2180083 4.2218230 9.3380702 11.1415688 8.7581059 5.3495776 0.0518593 14.1535814 12.5415775 1.7888527 8.4906893 -0.5330336 2.4669403 10.2071375 10.1318267 8.9015632 11.2168045 10.2007978 10.5228953 1.2742915 11.0253558 10.6277519 7.1742946 8.3813201 2.2742915 10.9240594 15.5225988 6.1828293 10.1260391 11.2402804 10.7905529 0.4669664 -1.5332424 8.7888632 8.0310847 11.1293809 -1.5332424 4.8244878 7.6592282 9.3872880 8.8624691 4.6763859 3.6763915 5.2482957 10.5434167 11.5638149 0.7888527 14.2190543 6.5330244 6.6013608 11.4797342 13.0919589 12.5104751 8.2318068 10.9381022 9.8511792 9.6020030 9.6715062 4.9426693 9.3171220 11.9107852 11.8138643 -1.5332424 10.8062283 9.1534355 0.7888527 3.5607516 9.4442150 10.5783968 9.8294269 8.6518105 14.6477184 9.9036466 9.2058717 7.7661433 1.0519289 16.1925610 10.2147085 12.7269725 12.3568193 10.6659939 9.7752741 7.6293267 11.1500920 0.66309000 1.16990000 1.17600000 0.01335900 -0.00774820 -0.41784000 -0.00180140 0.00000000 0.00000000 0.81318000 0.81318000 0.78910000 0.42587000 -0.41410000 0.00999360 0.01153900 0.01153900 0.00235810 -0.01519100 0.00013863 -0.40285000 0.04032600 0.03171800 0.03171800 0.03171800 0.03622900 0.03622900 0.03622900 0.02651400 -1.27930000 -0.41036000 0.07282700 0.02693500 -0.41784000 -0.41784000 -0.00180140 -0.01074500 0.00000000 0.00000000 0.00000000 0.06651500 -0.00294190 0.81318000 0.02104300 0.02104300 0.02104300 0.07455200 -0.41410000 0.02890300 0.00527490 -0.00029200 0.00235810 -0.00609040 -0.82806000 0.00013863 -0.40285000 0.03199900 -0.81942000 -0.81589000 0.03171800 -0.82529000 0.03622900 0.03622900 0.02651400 0.02174400 0.05879500 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 8.4641144 14.6308599 7.8847878 10.2835188 0.9651748 11.4771135 NA 0.0518593 8.6763884 9.4704531 -1.5332424 7.6242822 4.1948593 10.2458336 9.6109560 2.8592540 6.5490838 8.9222624 13.1164719 11.3693102 9.4417727 6.5003575 10.5440845 1.6368682 7.3061392 10.5228953 2.8592540 NA 11.2556534 2.0518941 12.0572882 11.0675449 7.8178746 10.1529978 6.7430598 9.6993561 4.1673740 0.4669664 -0.5330336 10.8239372 8.9904971 10.0287004 9.9109146 3.8244827 9.0565020 8.4384787 9.8233870 5.5113289 9.4534882 -1.5332424 9.7154557 2.9905011 4.3495776 9.5344031 7.2106587 NA 9.8250368 6.9904966 4.1393631 2.9263600 13.4428278 0.4669664 10.4993252 NA 8.0500179 4.8244878 7.5357132 9.3526314 12.220093 5.208400 8.059392 14.119416 10.062659 10.872343 12.763565 11.817322 9.485135 10.335372 12.933904 10.118435 8.031085 9.053775 1.051929 6.893200 11.270663 11.845365 6.331121 8.253205 8.796731 7.982635 10.688649 6.775274 5.421132 10.985588 7.364781 1.274291 6.349578 6.458797 11.143333 10.453488 8.208402 9.908323 10.984112 3.636857 8.901563 10.437401 10.840616 9.535713 10.635294 9.175157 1.926379 9.949415 5.585876 2.714861 8.862469 6.538397 11.284718 10.543417 6.355679 12.997829 8.638112 10.322582 13.298638 11.858447 9.225991 1.788853 TCGA-AC-A5EI NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA NA NA 2 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.118507e-07 1.39057e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.27363000 0.27363000 0.20886000 -0.00304750 1.03770000 -0.01363100 1.01680000 -0.01395300 -0.01395300 0.46810000 0.46810000 0.46810000 -0.00415460 -0.00415460 -0.01298900 -0.01298900 -0.01298900 0.00555290 0.00000000 -0.02562000 0.51228000 -0.00318590 -0.01285100 -0.01285100 -0.01285100 0.89267000 0.89267000 0.89267000 1.04510000 -0.00719580 0.27363000 0.00819590 -0.00163720 -0.01363100 -0.01174900 1.01680000 1.00990000 -0.01395300 -0.01395300 -0.02096100 1.59480000 1.59480000 -0.05320600 -0.00857660 -1.06770000 -0.01038200 -0.01381500 -0.00415460 -0.00415460 -0.00705760 -0.01298900 0.00555290 0.00000000 0.00000000 -0.00571210 0.51176000 0.00610900 -0.15067000 -0.03262500 -0.01285100 -0.00013862 0.89267000 0.89267000 -0.00318590 -0.00097017 -0.01340200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.235 0.235 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.235 0.235 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AC-A8OS NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.913223 9.524759 7.553699 12.236399 2.134155 9.931822 1.982145 9.755480 12.127523 9.390605 9.830432 9.082527 8.922063 9.967683 7.583721 9.330886 11.715926 9.609894 8.331869 2.397201 12.619185 9.855943 10.304586 10.777656 9.291002 10.206159 7.147622 10.312078 1.134155 3.134155 9.207766 12.592157 12.430274 7.590309 12.294158 12.331008 9.461488 6.606648 3.812231 7.488190 8.614748 11.264474 7.622804 12.627015 1.619601 11.316058 12.953940 8.223743 9.343857 10.761329 9.986534 5.116011 -1.187707 14.360439 11.813366 5.204552 8.312078 -1.187707 5.484657 10.841519 9.860038 9.265503 12.420372 10.217906 10.130210 2.397201 12.621397 11.478234 7.638781 7.638781 6.246860 11.869039 14.808882 9.231013 10.926951 10.500920 8.553699 2.512682 3.719118 7.949223 8.665542 13.173491 1.134155 4.397194 7.557066 9.487307 10.768608 5.002059 6.731095 5.079020 10.213112 11.829389 1.134155 13.353994 4.719123 7.335794 12.858845 11.580623 13.203879 7.221623 9.726617 10.003291 10.076557 11.756578 5.041050 9.013131 11.936515 9.827647 -1.187707 10.429240 8.688749 2.719118 4.902238 10.217374 9.854576 10.311580 8.931173 14.825642 10.094162 9.517000 9.746660 4.567119 15.253183 9.682597 13.507243 12.137257 10.304085 9.712344 8.185097 10.159865 0.00875280 0.00875280 0.00875280 0.00152550 -0.00598630 -0.01078400 0.00048022 -0.00533010 -0.00533010 -0.00193990 -0.00193990 -0.00193990 0.00917050 0.00853810 0.00479420 0.00479420 0.00479420 0.00000000 0.00000000 -0.00733390 0.00819590 0.02373700 -0.46834000 -0.46834000 -0.46834000 0.02791900 0.51054000 0.51054000 0.02946600 0.00875280 0.00875280 0.00277450 -0.00304750 -0.01078400 -0.01078400 0.01433000 -0.01023200 0.01126100 -0.00533010 -0.00166290 0.52731000 0.46732000 -0.00193990 0.01223700 0.01046500 0.01046500 0.01558700 0.00853810 0.00853810 0.02651400 0.00479420 0.00000000 0.00000000 0.00000000 -0.00733390 0.00819590 0.02637300 -0.48081000 -0.46834000 -0.46834000 -0.47300000 0.02791900 0.51054000 0.02946600 0.01964300 0.04726800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 9.4397661 13.2358734 6.0119048 10.6058355 4.9617761 11.2361360 4.8122312 1.6196008 8.8783213 8.1894426 NA 8.3162965 4.6451194 9.3706530 10.0542153 3.6702172 10.7351882 9.0987901 11.7529129 9.9318219 10.0312797 8.9733642 11.6921983 3.8996977 9.6244095 10.1302100 6.0601598 NA 10.5004826 4.2716647 12.7538301 11.8983685 8.5637763 9.8977047 8.9517836 9.6098938 3.7191177 0.3971458 1.3972006 3.4560833 8.7664285 9.8456553 10.3450752 6.7547472 9.2227048 7.8863739 9.5520129 5.1697847 8.9908970 NA 12.6461106 4.8566272 5.4560899 9.4762972 5.2110628 6.0314018 9.9581644 9.3357943 7.6131323 -1.1877072 13.6037513 1.6196008 10.3372636 NA 7.4632840 7.4488572 7.2468603 8.6514360 12.775920 5.221622 8.638781 12.294158 10.445682 10.031401 12.627015 12.362618 9.095529 10.497743 12.392020 9.789512 8.665542 7.663981 1.812252 6.682597 11.006681 11.449989 6.498733 8.740010 9.002057 7.204550 10.309221 8.171982 8.799496 10.777656 6.587020 1.619601 4.982159 7.322957 10.979023 10.941837 7.083695 9.077847 11.746845 6.772234 9.265503 10.223743 11.400010 10.834947 10.672155 9.303083 NA 10.110404 8.175863 7.182920 10.768608 7.259316 11.137819 10.213112 7.456088 13.893921 10.119433 10.672155 12.202401 10.913880 10.251544 2.134155 TCGA-AC-A2FE NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.976123e-07 4.560284e-08 10.8090240 7.9187094 6.6519802 11.4015971 1.1150332 9.7955244 NA 9.3924928 11.0721414 11.1268656 9.5116442 7.5365029 8.9324799 9.4826101 6.2792280 9.3112022 9.8194370 9.6086089 8.0219299 5.9223953 10.0491514 10.6911187 11.7721025 10.8531316 8.9085265 10.1566985 8.5484755 10.1101927 0.6295665 2.5556199 8.8982715 11.2284094 11.9466859 8.4017623 13.0835518 13.0053036 9.8870003 6.6870621 2.8312490 8.0287835 8.5365033 9.1903274 7.6586235 12.1619684 3.4369613 10.6094663 13.2364803 7.1687714 9.8968861 10.1683834 9.1555249 5.6652364 NA 15.2651344 12.7196263 3.9801076 8.6619338 -0.6922218 3.8926436 9.5472829 10.5674277 9.8095215 11.3319584 10.0504149 10.3643221 5.6475333 11.1739974 10.4040701 5.8233851 7.9297360 4.5744709 11.1627475 14.7724535 7.6626171 11.3197851 10.8898264 7.7128262 1.7671039 5.0356063 8.8784887 8.6408396 10.7982846 -1.6924549 3.4776126 7.2384219 9.9814351 10.6408398 4.6475333 7.1625525 5.0890447 10.4007718 11.5839542 2.1150332 13.9166899 5.8154781 7.4240285 11.8947587 12.2284094 12.6112511 9.1037240 10.7125598 10.8390659 10.5204209 10.2123190 4.6114675 9.2108130 10.7042892 11.4978177 -1.6924549 10.4523427 9.1278633 1.7671039 2.5563804 9.3656761 11.1258671 10.2358326 8.6848948 14.3382653 10.1198617 9.8075303 8.0457766 2.6296131 16.1052256 9.6685315 13.3946914 13.3118171 10.0799990 9.1238682 7.8134958 10.2495390 -0.3703800 0.3512600 0.3512600 0.0000000 -0.0048636 -0.0071504 0.3589300 -0.0012017 -0.0012017 0.3597900 0.3597900 -0.0239320 0.0042089 0.0017755 -0.0017558 -0.3612100 0.3756700 0.0050426 0.0050426 -0.0081171 0.0001842 0.0149340 0.0208090 0.0208090 0.0208090 0.0312010 0.0312010 0.0312010 0.0153530 -0.3703800 -0.3703800 -0.0096352 0.0097734 -0.0071504 -0.0071504 -0.0129440 -0.0129440 -0.0012017 -0.0012017 -0.0012017 -0.0093593 -0.0093593 0.3735300 0.0073026 0.0073026 0.0073026 0.0161920 0.0017755 0.0017755 -0.0017558 -0.3808500 0.0050426 0.0050426 0.0050426 -0.0081171 0.0001842 0.0149340 -0.3672200 0.0208090 0.0208090 0.0012936 0.0312010 0.0312010 0.0111670 -0.3839900 0.0369490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 10.0089909 13.3298354 9.3670290 10.8449028 4.4776126 10.8055362 3.3076908 -0.1073370 8.8593925 9.6723663 NA 7.4135932 6.0423948 10.0002999 9.3824948 1.7671039 9.0491513 9.2799462 13.3783085 10.5899041 9.2505213 6.9871639 10.9796677 4.1954500 9.4719629 10.3643221 5.1405742 NA 11.0005178 3.5930908 12.1750597 11.9062022 8.5814801 9.9306513 9.0874037 9.6886865 6.6652364 0.3076617 1.1150332 2.7671251 9.2160770 9.3230994 10.0107228 6.2025020 9.5440394 7.8429600 10.3891679 5.5838079 9.3744464 -0.6922218 10.9790043 4.3076835 3.8622728 9.4738662 7.1495317 4.5171371 10.1691591 8.5826448 7.5627133 -0.6922218 13.6245669 1.1150332 10.2175775 -1.6924549 8.2130716 5.3520770 7.9818766 9.3452314 11.5788556 5.6114645 8.5567980 13.0835518 10.0841174 10.5349995 12.1619684 10.9913370 9.5030567 10.3241445 13.5457905 10.7464763 8.6408396 8.3424832 -0.6922218 7.5292712 10.5721270 11.5395056 7.1021006 8.5942421 8.3369715 8.0339025 10.3167082 8.9470253 6.8584311 10.8531316 7.0287835 3.2145756 8.6284849 7.0990427 10.4719628 10.6948939 7.4851040 9.0037827 11.6012997 7.1021006 9.8095215 10.5425018 10.9333932 10.4462762 10.4099883 8.1765068 1.1150332 9.3793411 7.4535653 5.9515412 10.6408398 6.9623200 10.9705752 10.4007718 7.4776093 13.3913299 9.4719629 9.9578386 12.6926030 11.2871096 9.4863493 0.6295665 TCGA-AC-A3QQ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 2 NA NA 1 3 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.696403896 5.737865195 5.439340554 11.480213563 NA 8.433109263 NA 7.686395473 9.898772929 9.826120541 9.110140050 6.156269186 6.909287085 9.395141438 8.054389424 8.054389424 8.566253489 8.819764926 5.504191333 1.803764330 10.467056590 10.984727402 11.179412767 11.831658690 7.933035540 9.123102275 6.480213412 9.021537192 NA 4.125684160 6.362720603 9.961460547 11.165383201 4.996397786 17.512259306 12.926765517 9.967941376 7.675878018 3.854374729 6.675878018 7.267860667 8.829287641 7.046246574 12.408702973 NA 11.192077566 14.051807311 5.535555333 10.640803917 9.481220623 7.747941866 2.455833513 -1.003466630 15.725057692 12.402602758 -0.003611254 8.123102275 NA 3.519956991 8.158788910 9.264354863 8.166322787 8.670590043 8.196069946 10.234802465 1.318345767 9.453778678 10.085848188 8.821356576 7.422662751 3.166329818 10.661733659 14.016639847 5.290649254 8.838748228 9.759610101 7.094430331 3.996397786 NA 8.607422421 6.938912659 9.123102275 NA 5.504191333 7.418462368 9.616617577 10.177549973 4.388713056 4.244323872 5.281798382 8.843455044 11.579950678 6.040791631 13.901690746 6.654608821 5.903288984 11.193614433 13.186376718 11.172882623 9.388715209 10.706773738 10.237785131 10.176306814 9.234802585 -1.003466630 9.756285938 10.711072567 10.735334483 NA 9.972245763 7.764582359 1.996388746 4.852388432 7.731107194 10.274847171 8.571936902 8.611107445 15.366795702 9.837962158 7.982239527 7.562451562 0.581399457 15.717550369 10.070539198 12.355186306 11.961280092 9.441412515 10.020844827 5.879041601 10.564382361 1.75440000 1.23130000 1.57070000 -0.00193990 -0.00193990 -0.00360110 -0.00055444 0.02104300 0.02104300 0.00388540 0.00388540 0.00388540 0.00000000 0.00000000 0.16047000 3.06270000 -0.71042000 -0.00319040 0.00374650 -0.02438800 -0.02763700 0.00110930 -0.71060000 3.65690000 0.15920000 -0.01684100 -0.01684100 -0.01684100 0.47495000 -0.71114000 -0.00622860 0.00791750 -0.00193990 -0.00360110 -0.00360110 -0.00055444 -0.00055444 0.02104300 0.02104300 0.01883500 -0.01230000 -0.00478720 0.00388540 -0.04373700 -0.04373700 -0.04373700 -0.04373700 0.00000000 0.00000000 0.17950000 -0.71042000 -0.00319040 0.00374650 0.00374650 -0.02397700 -0.02763700 0.00110930 -0.62998000 -0.71060000 0.15920000 0.01824300 0.62424000 -0.01684100 0.47495000 0.00180300 0.02300500 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.009 -0.675 -0.551 0.159 0.000 0.000 0.000 0.000 0.000 0.560 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.009 -0.675 -0.551 0.159 0.000 0.000 0.000 0.000 0.000 0.560 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.767887152 13.133468950 6.848147179 9.899526411 4.125684160 12.094594383 4.422663592 0.996388746 9.525828303 7.554818283 NA 6.007626092 4.388713056 9.952773857 9.339583480 4.973675557 6.156269186 8.115338663 9.507161935 11.786949887 9.605290233 5.535555333 9.846584672 1.996388746 9.207069000 10.234802465 4.488251485 -1.003466630 11.169450224 0.996388746 12.859131971 11.795476986 7.166322787 9.602802958 8.032571450 10.487749812 3.318331304 1.581351247 NA 9.014597991 9.309280798 11.663065618 9.742072084 3.244323872 6.402560178 9.707204155 9.741231518 6.253785097 9.562451752 NA 10.177549973 0.581399457 4.205853839 9.339916570 7.933448120 4.388713056 8.938912365 7.835601377 8.732799664 1.803764330 14.034802392 -0.003611254 10.678953508 NA 7.353949570 5.353951334 7.295605489 9.302459347 14.784689 6.205852 7.845021 17.512259 10.027754 11.475167 12.408703 10.547145 8.356147 9.636643 12.826913 10.754204 6.938913 10.539913 4.205854 7.002023 9.713217 10.3643585 5.3183241 8.8197649 8.6221067 8.6546092 8.8485528 7.8851411 8.9665037 11.8316587 8.9751082 1.9963887 9.8980189 6.9366815 8.7260185 9.8141809 7.9793915 11.0931129 4.2058538 5.2631847 8.1663228 10.6366427 9.3126792 9.2336077 10.2672771 4.3183241 0.5813995 8.4322972 5.1663218 6.8356020 10.1775500 5.5199601 10.3972772 8.8434550 7.7311072 14.1955716 10.0442033 9.0838606 11.9249161 11.8853312 8.6293931 0.5813995 TCGA-BH-A5IZ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 NA NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.501815e-06 4.171709e-07 11.3760118 3.4906600 6.8337984 11.3317236 NA 8.0778417 NA 8.4448505 11.8464133 7.9031847 9.0095624 7.0621962 9.0576950 10.8361007 6.6782818 7.8416757 10.6826731 10.5832157 7.8573005 3.2593328 9.9144318 12.7818677 12.9710332 11.3827755 8.9069438 10.0326830 4.0933151 10.1936606 2.9056975 -1.2643045 6.5999530 12.4764963 12.1507163 10.1270104 12.4206250 11.5900509 12.5683602 7.3056222 3.5431246 7.9231189 8.0933188 9.2145365 9.0966140 9.1869779 NA 11.5777242 9.3805245 7.4738591 9.6236500 10.2903557 7.6396489 4.7801631 -1.2643045 14.2535934 9.8285240 2.4362152 8.8880516 NA 3.3207302 9.3477137 10.2937091 9.0822805 8.9919756 10.1594081 10.4283824 0.3207735 10.5863444 10.8062233 6.2980094 7.9131862 NA 9.6207006 14.8267269 7.9552256 10.1792285 9.6184099 10.1129774 0.3207735 2.8232398 8.4721689 9.2236069 8.8931137 NA 4.1280871 7.8701933 11.4617721 11.1698738 4.2593252 4.2903580 8.5527505 7.9181614 12.0198680 -0.2643045 13.4945106 3.9056878 6.7636732 11.6303952 14.2101382 11.9377376 8.8637613 11.7740000 11.4877293 11.2285239 10.8585949 3.6426554 8.3939781 11.3034853 6.4222666 2.0576929 10.3467916 9.2425704 4.2903580 4.6785170 8.2415785 11.0226133 10.5635065 8.3850228 14.1351783 11.2727425 8.8508104 5.8753181 -0.2643045 11.9198673 5.3056240 12.8415117 12.0722734 9.4457122 10.7991620 7.1409085 10.7800107 0.2400000 1.0268000 0.8532400 -0.6111400 0.1967300 -0.6315000 2.3005000 -0.5719000 0.9845200 0.0654930 0.0654930 0.1219600 -0.1021100 -0.0926590 0.0000000 -0.5414900 0.2433900 0.9865900 -0.6266500 1.0793000 -0.6119100 0.2122300 -0.6229300 -0.6229300 1.0176000 0.1715500 -0.2185500 -0.3622700 0.1013400 0.2035000 -0.6233100 -0.5998300 -0.6111400 -0.6315000 -0.6315000 -0.6222900 -0.6222900 -0.5719000 0.9845200 0.1823800 1.0464000 0.1571100 0.0607940 1.7386000 0.1360800 0.1360800 -0.6225500 -0.0069195 -0.0069195 -0.0666540 -0.6020600 0.9865900 -0.6266500 -0.6266500 -0.6325400 -0.5776300 -0.6706700 -0.6417300 -0.6229300 -0.6229300 0.0841720 -0.6033200 -0.3622700 0.1566600 0.1108100 -0.5974000 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.047 0.151 0.151 0.101 0.101 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.047 0.151 0.151 0.101 0.101 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 6.9056915 13.7947310 2.1951901 9.0072300 1.0576929 11.9481112 1.3207157 6.9305233 9.1377130 8.6855937 3.5937482 7.9525130 2.9056975 10.3904029 9.4696296 3.4906600 4.3207302 12.3375376 11.5047782 10.3305580 9.8462763 6.0756161 12.1255326 1.3207157 8.1578315 10.4283824 3.7801631 -1.2643045 11.0332564 2.9056975 12.0463796 13.6552354 6.1536189 10.2578579 7.6546303 10.0666838 3.2593328 3.0576929 -0.2643045 4.9056927 8.4396705 9.0833881 7.8547082 1.5430999 9.2865039 7.4670862 9.9831011 4.4906536 10.6241296 -1.2643045 12.0882242 1.3207157 0.3207735 10.4998174 7.8202300 4.3796210 9.0497835 7.5654898 6.5431216 4.7357659 12.9815424 -1.2643045 10.9122517 NA 8.1683086 2.6426554 8.1869779 7.0072303 12.128932 8.831164 8.048650 12.420625 10.675346 11.529980 9.186978 11.435556 9.023802 10.912252 13.110535 12.064161 9.223607 7.954936 -1.264305 8.381425 10.262266 11.1137907 9.0856010 9.0257857 8.8018561 9.1630798 9.2179294 5.7691899 5.8125829 11.3827755 11.7815265 1.9056975 8.2135252 8.6771812 11.9687873 10.0599474 7.7413915 10.4495829 7.9717809 4.6184090 9.0822805 10.0423982 11.8848788 11.9952159 9.8981582 8.3467916 NA 10.1760547 10.8304944 5.1451598 11.1698738 6.2514673 10.6854695 7.9181614 7.4568661 13.0371916 10.9044389 10.0101450 11.8303394 11.8727580 8.3393931 -0.2643045 TCGA-EW-A6S9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 2 NA NA 1 2 1 1 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3229191 4.6792774 10.1279032 10.7546576 -1.3868456 9.9745845 NA 9.1763854 12.2214439 7.7680070 9.5268265 7.3813734 9.1199926 9.7824877 5.9169710 9.2687198 10.3709957 9.8323576 7.4076051 1.9351203 10.6369434 9.9135415 13.6099715 11.4914316 9.3846784 10.6086029 4.6131898 10.0914531 NA 2.0726203 7.9283383 11.0228451 12.4222537 7.4555393 17.0502299 13.1111656 10.1567043 7.1130347 4.3136304 6.7059461 8.3325777 7.3308658 8.2168152 12.9689531 -1.3868456 10.1644166 13.3235112 4.6575828 9.3086958 10.7536993 7.4988851 8.1504074 3.1981484 13.9067753 8.4429120 2.3136232 8.9860542 -0.3868456 5.0225809 10.2379845 10.4916232 9.3214109 9.8335674 9.7262800 9.9541518 -0.3868456 11.5300016 11.8954087 6.6075419 7.2278989 0.1981169 9.2642408 15.1168285 8.4351860 10.6640580 10.6916735 7.7085859 2.5200702 4.1677754 8.1465188 9.0268169 10.3058046 -1.3868456 5.2425453 7.5380019 8.2112415 11.0278743 7.5260782 4.9530370 5.2570446 9.5782517 11.6620165 4.5200828 13.9411276 6.0561326 6.6521078 12.6290396 13.2328359 12.5115070 6.9925679 10.5710166 11.0797754 10.5821617 11.0959970 5.0889218 8.8623026 11.7994581 13.5614650 -1.3868456 10.7689560 8.8492033 2.7831213 3.3707502 9.0162010 9.8962775 9.4664987 9.3419600 14.9937008 10.7145082 9.5883206 7.0012066 2.0726203 14.8961689 7.2642408 13.5024553 11.6216177 9.9480210 9.9630232 8.5976075 10.2707085 0.0534740 0.0534740 0.1475600 -0.1627400 -0.0914200 0.0189430 0.0532370 0.1027800 3.6569000 0.0944910 0.0944910 0.0944910 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0062286 -0.0540160 -0.0540160 -0.5312400 0.0754150 0.0000000 -0.6313100 3.6569000 0.1616000 -0.5036000 0.6335300 -0.0047079 0.0738740 0.0534740 0.0534740 -0.1707200 -0.1627400 0.0189430 0.0214630 -0.6095000 -0.6519300 0.1027800 -0.6051600 0.0346770 0.0711040 0.0583670 0.0944910 -0.0790770 -0.7366100 -0.0530710 -0.0530710 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0540160 -0.0540160 -0.0540160 -0.5312400 0.0623000 0.0000000 -0.4552200 -0.6313100 -0.2900000 0.0535210 -0.5036000 -0.5878400 0.0891270 -0.0682610 -0.5690200 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 8.4602466 14.2965127 9.5431871 9.8250774 2.0027385 11.6034703 0.1981169 -1.3868456 8.9396186 9.1858893 0.1981169 8.2639715 -0.3868456 10.7052855 8.9146853 3.4711745 6.2926695 9.6424763 11.0386672 11.4736941 10.0434535 8.0623376 11.1256826 2.6131780 8.8705768 9.9541518 2.3136232 NA 12.4001733 2.3136232 12.2542247 12.2458435 8.0097939 8.9158280 9.6445456 8.9652325 5.2570446 1.4205632 NA 4.6792774 7.9032076 9.6745602 10.3584432 1.1981798 8.1104421 8.1130347 9.7930982 6.0225809 10.0828308 NA 9.7768388 4.7424698 3.8985953 9.3572577 6.6975723 6.5789734 8.8776317 7.2498141 8.1406662 0.1981169 13.2056461 0.1981169 10.4325699 NA 8.6479879 4.4711679 8.3529695 7.9729384 14.206034 6.526078 9.024700 17.050230 9.444496 10.669488 12.968953 11.563927 9.267977 10.674898 13.210951 10.088922 9.026817 9.357182 1.198180 7.549827 11.409837 11.5193280 5.7321308 8.9373697 8.9089579 8.4658435 11.0867122 7.1170145 6.9169698 11.4914316 7.5673857 4.6575828 7.5260782 7.4779946 12.5248619 10.2237526 7.2820737 9.5557036 10.4460791 6.4773746 9.3214109 10.1687368 10.5750005 9.7099042 10.5219569 9.8097911 -0.3868456 10.2880654 6.6684709 7.1445706 11.0278743 7.7295331 10.7282327 9.5782517 7.3879759 13.8491285 10.1811452 10.2718469 12.5779811 10.6414404 9.3780607 1.4205632 TCGA-EW-A6SA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 3 NA NA 1 1 1 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1711078 2.3121424 7.8609771 10.9197170 NA 10.2601575 -0.1028370 9.3065088 11.4894193 12.1418782 9.8508294 6.7426086 9.0628624 8.6136517 7.0703786 8.8347371 10.8189589 9.9564624 5.6784776 NA 12.2858528 8.0108604 13.9927622 11.9217959 8.8209406 10.7713309 2.0126044 9.6915230 -0.6877995 -0.1028370 5.6159371 10.6581151 14.0083352 7.5337424 12.5939406 13.5216850 7.5952441 5.6067768 1.8971242 4.0400771 8.3929729 10.9779355 5.4619018 13.6435973 0.3122005 8.2473204 15.1246712 NA 9.6887421 11.8101320 3.3121569 5.9703659 0.3122005 11.8955932 6.1195097 -1.6877995 7.0502481 NA 4.1947962 9.2908660 9.4388598 10.0815801 9.3996182 10.3372950 9.6004448 NA 10.7257834 10.1315362 6.6740990 6.7467830 1.3121424 11.8393881 14.1938430 8.7074647 10.6969392 10.1732424 8.2692576 0.3122005 0.3122005 5.8435367 8.3442014 9.8522836 -1.6877995 5.7878895 7.8219302 10.6368985 10.2919379 5.0803379 2.1195222 1.4820738 10.0607677 12.5030604 4.5975550 13.3302252 6.0603479 8.3483289 12.4787893 10.1568612 13.6792289 7.9774912 10.8571199 11.1751802 11.0977408 10.9618607 3.6697071 9.3517599 11.7137017 12.6735510 -1.6877995 10.1489948 9.6947794 NA 2.8413492 8.8791608 11.2608877 10.9938331 8.2069733 15.0514350 11.1951805 10.3735266 9.1521464 1.6340821 15.7261056 6.0195151 10.7723553 9.3275706 10.2008987 9.8801115 8.2894352 10.1395378 -0.224500 -0.328870 0.319360 0.056979 0.039865 0.096710 0.057978 0.038810 0.000000 3.317100 1.250900 1.215900 0.115690 0.074277 -0.197650 1.357100 -0.720100 -0.389030 3.656900 0.323870 0.222400 -0.649370 -0.652090 -0.644690 1.314600 -0.630330 -0.630330 0.402820 0.342950 -0.128720 -0.195090 0.538940 0.056979 0.520180 -0.184550 0.057978 -0.164300 0.038810 0.000000 0.016044 -0.401820 -0.412220 -0.689900 0.280640 0.280640 -0.640730 -0.582420 0.074277 0.084393 -0.201960 -0.720100 -0.414070 -0.412970 -0.412970 0.243310 -0.753720 -0.399050 -0.698720 -0.652090 -0.644690 0.291080 0.467120 -0.612270 0.170500 -1.257700 -0.660840 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 0.580 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.170 0.170 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 0.580 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.170 0.170 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 6.3836179 12.5588960 4.8357169 8.4128179 2.9560195 11.0078188 -0.6877995 NA 8.5742503 6.2369671 NA 5.9191899 1.1194890 10.7856075 9.4883286 4.8667448 4.1195139 9.7944592 8.2265408 11.5774775 10.3636873 7.4593603 11.0485574 -0.1028370 10.4973406 9.6004448 4.5409758 0.6341286 10.2295275 3.6340821 12.0131369 12.2271945 6.8551874 10.4440124 6.2721576 9.6368986 2.4820738 5.6250396 0.6341286 7.2808218 9.3558664 10.2469521 9.8585676 1.8971242 9.7589389 7.5142793 10.2940794 5.3674375 10.8793985 NA 9.7695364 0.3122005 4.5216099 10.1125984 6.1835679 -1.6877995 8.3149706 7.0902321 3.7384220 NA 13.7507849 0.6341286 10.3805979 NA 6.2369671 5.0935137 8.9433324 8.7108991 15.4884235 6.0670428 9.3022594 12.5939406 10.1191078 9.4082117 13.6435973 12.9051964 7.9176352 10.0246825 12.1849265 10.1986141 8.3442014 8.1418783 0.8970855 8.0160589 13.1168915 10.550560 6.106572 8.906480 9.781288 8.681393 10.259263 3.399622 4.145042 11.921796 7.002153 NA 7.906480 7.930853 8.845485 8.494550 7.952401 9.520999 8.772611 2.219060 10.081580 9.402930 14.559378 8.452985 9.743653 8.090233 NA 8.602105 5.420681 2.399609 10.291938 4.615934 10.571016 10.060768 6.930541 13.704305 10.641391 9.574250 10.619641 11.888404 9.613080 -0.102837 TCGA-EW-A6SB NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 5 NA NA 2 5 1 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.7977225 NA 5.8646987 11.4989042 NA 9.2739065 NA 7.4803572 10.5519515 10.7664085 8.7829203 8.2768242 8.1199553 10.4405830 7.4854107 8.6896741 8.7497055 10.5693084 8.7788101 6.2081817 10.3437395 12.4838335 12.8765266 11.4106798 9.6852890 10.3444350 8.9179965 9.8820454 NA -0.6743833 7.3699332 8.4979668 12.3248347 4.8173930 11.5660326 11.5377317 9.5923258 6.4340644 2.6474757 8.5805680 8.7890638 9.6144054 7.9328696 6.5734669 NA 12.0372063 9.6687251 6.9908755 9.8859486 10.3360674 5.5153624 6.8253850 1.3255591 16.0049301 11.7697778 0.3255015 9.0207678 NA 8.8953950 8.2081822 10.6063101 8.9890976 8.9067400 8.9711978 9.8372921 3.1328894 10.1694604 11.2016726 4.6474699 8.1425232 1.6474527 8.1101742 13.8147601 6.1416269 9.6463398 8.2294211 11.2529470 2.7849646 -0.6743833 7.8412391 7.1959037 8.7306807 NA 2.3255303 7.1835203 9.4967162 10.9662362 4.3255375 7.5639444 5.3699340 9.8510602 11.8325906 1.3255591 13.4659697 0.9105024 6.3142234 11.2032069 12.2479379 12.1933972 5.2797350 11.1445209 11.0036993 10.7210735 10.1663173 3.0259855 9.7818937 11.6429520 7.4548224 0.9105024 9.4509528 9.6236019 -0.6743833 2.3255303 8.6940458 11.8571645 10.0728932 8.8991865 14.9269329 9.8868274 10.0644760 6.4954649 1.6474527 14.3875855 6.4235714 11.6756498 11.4163134 9.5227561 10.3304620 6.5829278 9.8047436 0.36100000 0.36100000 0.55054000 -0.02325000 -0.01078400 -0.18244000 0.00930980 0.00083195 0.01000600 -0.39753000 0.16010000 0.78331000 0.39147000 0.02468900 0.18450000 0.18450000 0.18450000 1.11300000 -0.00373950 0.01000600 -0.17537000 -0.19625000 -0.20535000 -0.20448000 -0.20448000 0.14831000 0.14831000 0.18935000 -0.00332430 -0.20958000 0.36100000 -0.02315500 -0.02325000 -0.42766000 -0.21595000 -0.35442000 -0.35442000 0.00083195 0.01000600 0.00261960 -0.17221000 0.21613000 -0.40533000 -0.22613000 -0.22613000 -0.22613000 -0.22613000 0.02468900 0.02468900 0.18510000 0.18450000 0.95620000 -0.00373950 -0.00373950 0.01000600 -0.17537000 -0.19625000 0.09638000 -0.20535000 -0.20448000 0.18268000 -0.14530000 0.18935000 -0.00332430 0.41647000 -0.20486000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.284 0.284 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 0.000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.284 0.284 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 0.000 10.0285777 11.8834816 4.2324305 8.4235714 3.7849750 12.4352068 1.6474527 5.3916268 9.8944455 7.1328945 5.2081817 7.4235714 3.4129983 10.6581354 9.7038342 0.9105024 4.6830901 10.1655304 6.9693957 9.7580813 8.1917363 6.1710286 10.1150731 2.9105024 9.3056790 9.8372921 1.9105024 NA 10.3492937 4.9105024 14.3527542 12.7138258 6.6384229 10.0242440 9.6338784 10.4438315 0.9105024 4.3255375 0.3255015 NA 10.1678896 11.6036984 7.0870905 2.7849646 8.4809396 7.7476042 9.9684936 4.9105024 8.9235919 -0.6743833 12.0209851 2.4954649 2.3255303 10.7602510 8.1409545 10.4942115 9.2081824 8.8801281 13.9787203 4.4954649 14.4767145 1.3255591 11.3301110 NA 9.3808219 1.6474527 8.4288270 8.2651185 11.905680 8.610941 8.358962 11.566033 10.117516 11.650282 6.573467 8.399681 9.536211 11.600209 13.293396 11.768224 7.195904 8.265119 3.495465 6.825385 9.691862 9.9521610 9.0854276 8.8510600 8.9179965 7.9693957 9.5500114 8.0904110 7.0190258 11.4106798 5.3479066 0.3255015 10.2294213 9.2671739 11.5621515 10.9882077 8.2354322 10.0837625 4.6830901 10.9806228 8.9890976 10.3071066 10.7829203 10.1449201 10.0285777 7.5543578 NA 10.4546163 6.4854107 11.7818938 10.9662362 3.9105024 11.0406434 9.8510602 7.5054488 15.3898190 10.9015512 10.9485063 12.2523913 11.8953950 8.3862354 6.2081817 TCGA-AC-A3W7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 4 NA NA 3 3 2 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.362758e-06 5.840393e-07 10.7074977 7.7672602 7.1348924 11.8112330 -0.7386497 9.5623728 -1.7384090 9.5028356 12.2205447 10.9012412 9.3719317 8.1995575 9.3588222 10.0732244 6.9160849 9.2141897 11.8785714 9.2796484 7.5211913 1.5833747 12.1553186 10.5554947 10.8129163 10.8445310 9.3502364 10.2561553 6.0096405 10.1147578 0.5834228 2.7208694 7.9178733 12.7645287 12.5687914 7.1683392 13.0719697 13.6500374 10.0619438 6.5188357 3.9053028 7.4162664 8.3621108 10.6096232 8.6644604 12.9813718 3.5093791 11.7298178 13.9776247 8.9276722 9.4726370 10.8534381 7.4438428 5.0296340 NA 14.2416211 8.9747146 3.9618918 8.3581633 NA 4.2387257 9.9021452 9.4150004 9.1914464 12.0675951 10.0012289 9.9692389 2.1683532 11.5544888 11.3206237 8.9496986 7.9978501 3.3058392 11.4265123 14.7057191 9.5182997 10.8165167 10.3758414 7.5514668 1.4313555 4.7532997 8.7751760 8.3515608 11.7859900 0.2614706 5.0688041 8.1053696 8.8398211 10.5497377 6.2838162 5.2614481 4.6877158 10.0217525 11.8759281 0.8463930 13.4827333 5.1318117 7.4611209 12.4693015 13.4350864 12.7196627 8.0784321 10.2254281 9.8998842 10.0403016 11.4810706 4.7850117 9.3561859 11.4488004 10.8417069 -0.7386497 10.3699727 8.5946038 1.0688084 5.0298990 9.3422658 10.4304337 9.9125000 8.8322527 14.3159678 9.9102552 9.0517968 9.5264773 3.8160364 14.8853441 10.5514672 13.3594804 12.2389071 10.4986583 10.0092217 8.3660472 10.9603114 0.0296060 0.5693400 0.5729100 0.0036076 0.0036076 -0.0095426 0.0000000 -0.0008316 -0.0008316 0.0260920 0.0260920 -0.0055375 0.0291840 0.0241960 0.0186180 0.0186180 0.0186180 -0.5742400 0.0794470 -0.0024938 0.0283410 0.0467000 -0.5383500 -0.5383500 -0.5383500 0.0891270 0.0891270 0.0891270 0.0672320 0.0296060 0.0296060 -0.0050315 0.0036076 -0.0095426 -0.0095426 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0095883 0.0114000 0.0260920 0.0186190 0.0186190 0.0186190 0.0461330 0.0241960 0.0241960 0.0471260 0.0186180 -0.5742400 -0.5558700 -0.5558700 -0.0024938 0.0283410 0.0467000 -0.5539700 -0.5383500 -0.5383500 -0.5628600 0.0891270 0.0891270 0.0387710 0.0332670 -0.5402900 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1022261 14.2691545 5.7208804 10.6115588 3.3266812 11.5258909 2.5093665 0.5834228 8.8435904 8.4463236 1.0688084 7.9841193 3.4313689 9.4282391 10.2369381 2.3489122 9.1256346 9.3395991 12.4548967 9.9610207 9.9737087 7.8482880 11.0511857 3.5468451 9.5194253 9.9692389 4.5833747 NA 10.3248434 4.0163359 12.4695302 12.2161899 7.4830354 9.8793748 7.6012984 9.2656687 5.1562672 0.5834228 -0.1536070 4.7371838 8.5957215 10.0058617 10.2490676 5.1562672 9.0155006 8.2430154 9.4938693 5.2039646 9.0911712 NA 12.0458787 3.7533050 4.5093728 9.3773698 6.2362075 2.0688084 10.0329378 7.3329111 4.9479466 -0.1536070 13.9822270 0.8463930 10.3745393 -1.7384090 7.9688073 5.8313047 7.5141136 8.4818265 12.990587 5.283814 8.300367 13.071970 10.600185 10.331569 12.981372 12.697835 9.239637 9.768252 13.002599 9.872934 8.351561 9.072020 1.431356 6.901694 11.186261 11.4856008 5.5093760 9.0155006 8.7422384 7.1100709 10.6985943 7.2444419 9.2893543 10.8445310 7.9071070 5.3803901 5.8761584 7.0621865 11.0530182 11.0415779 7.3829819 9.3119771 10.9976388 4.9338747 9.1914464 10.3640803 11.5569303 10.8782268 10.6703087 8.8798338 NA 10.1877258 7.0122893 4.9618872 10.5497377 7.1773278 11.2418164 10.0217525 7.4035558 14.0059663 10.1690901 10.3449277 12.3153742 11.7536771 10.0667891 0.2614706 TCGA-EW-A6SD NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 1 NA NA 2 6 1 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.7619349 3.5523033 8.5998210 11.2650801 NA 9.5213855 NA 9.4914669 11.2760903 7.8586947 9.1899673 7.7107369 8.6727305 11.0524380 5.6029349 9.9366287 9.6830618 9.9329231 8.9458511 4.3596617 9.8677805 11.3383437 14.0669159 9.7336372 10.9656332 11.0052840 7.1670176 10.3605822 NA 3.6518439 8.6991487 10.3430050 12.7297270 6.5065036 16.8935235 12.3347207 10.3960042 7.5904426 5.7107376 5.2368064 9.1057996 6.6991490 6.4728728 12.9339277 NA 10.2966608 11.8582064 6.5523079 9.0644892 11.0052840 10.5085799 9.4358236 5.1372699 14.0198730 9.8915213 -0.2549779 9.1680683 NA 6.4931461 10.6029336 9.7913944 9.7250922 11.2275084 9.7610643 10.0942338 0.7449361 11.2828989 10.8664860 5.8110420 7.8083477 8.2002797 9.2176434 14.6276433 7.6843847 11.0361233 12.5730890 7.8845039 1.3299273 0.3298699 6.8845039 8.9248615 11.1049765 -1.2549779 5.6638171 7.2287687 8.2860490 10.5683197 5.4591988 7.1878964 5.3888095 10.5841563 11.7065831 4.9148754 13.6700897 5.4314525 7.0980995 11.9352402 13.9769612 12.7431022 6.4173783 11.0280409 10.4257515 9.7170994 10.9887216 4.9148754 8.3977974 11.6467622 9.4049485 -1.2549779 10.6378747 9.2714518 1.9148706 2.8332544 9.2636056 11.4732982 10.1107282 8.4173779 14.9368985 10.9041932 9.9653309 6.6214688 1.3299273 14.9902638 7.7393060 12.7883217 13.1088819 10.1910019 9.4566195 8.6106857 10.4147589 -0.611970 0.088321 0.106130 0.088756 0.038833 0.178360 0.191540 2.518200 3.656900 -0.264270 0.316060 0.496220 0.115130 -0.282510 0.117030 0.117030 0.117030 -0.608210 -0.614940 0.086730 0.104010 -0.276860 -0.613600 3.656900 2.885300 -0.171010 0.105030 0.105030 0.112780 -0.616960 0.211990 0.000000 0.067475 -1.003500 0.757280 -0.626300 -0.624510 -0.177850 -0.627880 -0.633730 0.101240 -0.260050 -0.632460 -0.612450 -0.612450 0.032906 0.032906 -0.282510 -0.280430 -0.613410 -0.612540 -0.608210 -0.612160 -0.612160 0.086730 -0.557030 -0.323510 -0.218930 -0.613600 -0.590150 -0.564810 -0.171010 0.105030 0.112780 -0.327920 -0.621270 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.223 -0.223 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.223 -0.223 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 8.7064021 13.4729793 3.3299129 9.2186584 5.5131370 12.0071942 2.9148706 5.7783768 8.6712484 8.3541312 NA 7.8029441 6.3223807 11.0323763 9.5982621 2.8324242 8.0510142 9.4973331 9.3915113 12.0016035 8.0185852 7.9198781 10.6268312 2.7449576 7.7421322 10.0942338 2.6518439 NA 13.9698963 1.3299273 12.0159778 12.3316751 7.6367363 9.5106530 8.2782822 9.5098241 4.8324141 1.3299273 0.3298699 7.7589727 9.3770389 9.7673204 9.8864210 2.0668814 10.3530918 8.8664861 9.5683198 7.0023402 10.0146637 -0.2549779 11.1431618 4.2043833 3.5523033 9.1100719 6.8025112 8.4419200 8.7035053 8.3033734 10.4817772 2.6518439 12.8772113 0.3298699 10.8809824 NA 11.2010502 3.7449576 8.1858220 8.3374096 12.042403 7.756180 9.352283 16.893523 10.207455 10.654471 12.933928 10.620702 9.021077 10.469381 13.386440 9.645819 8.924861 9.119992 2.066881 9.896603 12.642325 11.793610 5.842984 8.429701 9.380671 7.934777 11.175416 7.523029 8.875523 9.733637 9.344865 NA 8.137270 7.647177 13.674951 11.649587 7.565132 9.569116 9.920502 8.840350 9.725092 9.781813 10.776998 10.623770 10.818090 9.191002 3.699152 9.333377 6.662623 8.943397 10.568320 6.291847 11.036549 10.584156 8.030771 14.306508 9.837049 9.804297 12.485577 11.717753 9.215611 3.914880 TCGA-BH-A8G0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.9446575 8.9344392 7.0898329 11.5063778 3.0275433 10.4454011 NA 9.5042352 11.5593888 11.8986385 9.5839419 7.9624536 8.7538669 9.6891172 8.5344103 9.3871691 10.8439677 9.6594747 8.1689047 4.6125117 11.7076496 10.6628934 10.9499145 11.3350843 9.3291794 10.2749177 7.3064081 10.2659421 -1.0597957 3.1100124 9.1299105 12.6638534 12.5929308 7.8409529 13.1287519 12.7348063 11.0122184 6.7214451 5.1880131 7.8166029 8.5418567 8.9666093 8.9803755 12.2272210 4.8227301 11.5224631 12.9907848 7.0275489 9.8323858 10.1562253 7.7855761 5.7082700 -1.0597957 14.9009218 11.2223055 0.5250666 8.6832371 NA 4.5250478 9.8544709 9.8469764 9.8522267 11.4053971 9.7863598 10.4597221 3.1100124 10.5278633 10.5625952 7.3409654 8.0564296 6.3830286 11.4828759 15.0726458 8.4074467 11.0904678 10.6857602 8.2438666 3.0275433 2.1099957 8.8559651 8.6107421 11.6775444 NA 4.6405284 7.0745119 9.8250195 10.2620139 7.7279885 7.1446572 5.9513127 9.8250195 11.6722533 0.9400540 13.6038107 6.2068718 7.7918349 12.2911631 12.7472395 12.8466007 8.6577622 10.3736713 10.7721847 10.6869192 11.0716213 4.8469746 8.9926537 11.3237901 10.8443441 0.5250666 10.3700156 8.7634531 2.9400916 5.0087558 9.9693730 10.5441757 9.8019482 8.7312488 14.8972105 10.3866522 9.3248695 8.9000876 4.5839402 15.2397053 9.6300838 12.9229012 13.2315443 9.8833332 10.1018475 7.8257824 10.4105770 0.02946600 0.02946600 0.26232000 0.00055459 0.00055459 -0.00027724 -0.00097017 -0.00268990 -0.00268990 0.00097064 0.00097064 -0.00083160 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00020717 -0.00020717 -0.00609040 0.00083195 0.00263570 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00791750 0.02946600 0.02946600 -0.00027724 0.00055459 0.00733550 -0.00027724 -0.00097017 -0.00097017 -0.00268990 -0.00268990 0.00013863 0.00471900 -0.00609040 0.00097064 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.32426000 0.00652620 0.00000000 0.00000000 -0.00020717 -0.00020717 0.00221930 -0.00609040 0.00083195 0.00263570 -0.17677000 0.00027728 0.00027728 0.00166420 0.00027728 0.00027728 0.00791750 0.00416320 -0.00270480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.1495392 13.8066886 7.2529691 10.4233978 6.2209490 10.5212864 7.6405255 1.5250666 8.6949735 8.5231687 0.5250666 8.1384080 3.9400822 9.6874397 9.8257821 3.1100124 9.8611829 9.0182366 11.1954095 10.2450075 9.7403630 7.5325429 11.1775946 4.0693671 9.9301897 10.4597221 5.6680056 NA 11.0248942 4.7214438 13.2786133 11.9421976 8.1856386 10.5911375 8.2976376 9.1409844 3.9400822 3.7474411 0.5250666 2.6405284 8.8767238 10.0420615 9.5584714 6.3995181 8.4468496 7.2392940 10.4787598 6.0169019 9.6474449 NA 11.8563385 4.7980661 5.2254870 9.1189748 5.2108019 8.0007820 9.6474449 9.0974328 8.0354826 3.4636486 13.7223674 1.9400916 10.4254120 NA 8.6611849 6.7918349 7.7279885 9.4339413 12.427839 4.188013 8.530673 13.128752 10.412269 10.236429 12.227221 12.475726 9.239786 10.455786 13.112591 11.486980 8.610742 8.585744 -1.059796 7.471467 10.612069 11.270443 6.463647 8.689955 8.827306 7.362151 10.172003 8.711575 8.475361 11.335084 8.321629 3.027543 7.668006 5.678314 11.657762 10.989934 8.102477 8.855965 12.058054 7.654331 9.852227 10.325409 11.264829 10.480698 10.388718 8.772976 -1.059796 9.928273 7.546380 9.118751 10.262014 7.923080 10.903148 9.825020 6.962454 14.268914 10.020237 10.365826 12.545334 10.972132 10.134843 1.747430 TCGA-AC-A4ZE NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 1 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.98852713 9.15393476 6.64203580 11.69201263 1.01271168 10.28102623 1.42771343 9.53558760 11.29112862 12.60279832 10.06569993 8.38045803 9.44452483 9.54276027 7.96104620 9.18843653 10.60824743 9.30806548 6.58253493 1.59765035 12.18698068 10.69567374 12.01197452 12.16062600 8.91555675 10.31188713 5.57746508 10.54014964 -1.57217932 5.01268040 8.33310346 11.79567735 13.22482083 6.63228712 13.27956325 13.76753185 8.94144411 6.76310744 3.28569813 6.08592810 9.06434129 10.22821215 5.50453141 13.34797643 0.01264018 8.99186618 14.37398327 6.09305305 9.35527246 11.09527174 9.47960527 7.72692452 -1.57217932 12.75061865 8.97171512 2.59765035 7.62738870 NA 4.42771343 9.62124200 10.47654401 8.90648628 10.90066125 9.19341719 10.35364187 9.84028651 11.59497796 11.01103453 7.77201231 7.43053200 12.56342591 11.64446249 14.03588480 7.38057448 10.82378621 10.85319484 6.97846336 0.74966298 NA 7.39638301 9.02390651 12.18061991 0.01264018 2.51518258 7.20250392 10.65683589 11.01009390 4.33460403 4.71311840 3.88714505 10.03504691 12.14828155 5.02762738 13.57627266 5.98995869 7.42489606 11.14539304 10.99757222 12.97207741 7.57492119 10.22942498 10.94169088 10.94239618 10.69157264 5.07157391 8.56214281 11.41870691 10.72463288 -0.57217932 10.24029513 8.86858584 0.42771343 4.78738022 9.97990544 9.08682065 9.61135204 8.63960480 14.70903092 10.82859604 9.80221277 9.64506863 2.95127073 15.60300302 9.75245976 12.41515831 12.35067263 10.33685966 9.71888730 7.86650868 10.95368757 0.00810110 0.82902000 0.88912000 -0.00314180 -0.00314180 0.00907570 0.00365190 0.00392660 -0.91813000 0.00117370 0.00117370 0.00000000 -0.45251000 0.01214200 0.00073752 3.65690000 3.65690000 -0.00078739 -0.00078739 -0.44993000 0.01982700 0.00935420 0.02470800 0.02470800 0.02470800 -0.02543900 -0.02543900 -0.02543900 0.00156980 -0.94832000 0.00261650 -0.00701350 -0.00314180 0.00907570 0.00350960 0.00365190 0.00365190 0.01339700 -0.91813000 -0.91813000 0.00032152 0.00032152 0.04476100 -0.00161870 -0.00161870 -0.00161870 -0.00161870 0.01186300 0.01186300 0.00073752 -0.91970000 -0.00078739 -0.00078739 -0.00078739 -0.44563000 -0.00293870 0.00935420 -0.97338000 -0.92634000 0.02470800 0.00601430 -0.02543900 -0.02543900 0.00156980 0.03599200 0.02852600 -0.453 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.453 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 9.43474393 11.03689540 1.88713530 9.75302215 4.02852495 11.13959867 1.42771343 NA 8.72463288 6.43334174 NA 7.81288901 5.98995869 9.80709502 10.02437232 4.74964689 8.14539317 9.16242633 11.67875514 10.24229905 9.77058015 8.57746357 11.60917952 3.12816140 9.65352655 10.35364187 4.74964689 NA 10.49178567 3.07157391 12.11520167 10.98230549 7.54145908 9.27399043 7.76310678 9.43754527 4.61753946 -0.57217932 0.01264018 9.50252713 8.88612332 11.40213122 9.90192957 6.40499676 8.18742186 7.44730726 9.73206802 6.61259136 9.87634919 NA 12.03389049 5.50453141 5.16918343 9.12404969 6.83812609 1.59765035 9.58569512 9.54341062 5.63716970 NA 13.83392164 1.42771343 10.09925772 -1.57217932 5.31035830 5.96687570 7.57492119 9.43824481 15.254218 5.169183 8.527064 13.279563 9.979905 10.555389 13.347976 13.143518 10.347198 10.928036 12.319216 11.914175 9.023907 8.525749 2.887155 7.228617 10.956903 11.02832651 7.57492119 8.27006681 9.81303978 8.80058157 10.61638582 6.52574943 8.27006681 12.16062600 5.92756228 -0.57217932 5.85398068 7.98017443 9.12207449 10.36913109 7.16242658 9.40571204 12.88849247 4.28569813 8.90648628 10.55989499 10.46766383 10.52443182 10.77672138 8.28102635 0.74966298 8.80202806 5.45727909 3.01267593 11.01009390 2.82003596 10.97990537 10.03504691 8.08972641 14.23911642 9.33159841 9.63899659 12.38509079 11.38608811 10.51551092 0.01264018 TCGA-AC-A5EH NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 3 NA NA 1 2 1 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2.725517e-06 8.343418e-07 11.6221273 1.3069621 6.3367243 12.3074473 1.0439744 9.1388127 2.1814524 9.0861500 11.2295621 7.9167722 9.7429952 6.5033742 8.7921363 9.7220153 6.8818860 9.3739640 10.4093909 9.7901217 7.2377148 2.1814524 10.7149536 11.6369609 13.5574242 11.4588400 9.0280771 10.1170138 5.7106990 9.8331508 NA 4.0074198 8.1078777 10.1212931 12.0766779 7.9556348 12.7496621 12.9484274 11.6268380 5.9604190 4.1143337 7.1649592 7.7664096 11.4592626 8.4207199 11.8044970 -1.2778838 12.1818311 13.5141446 4.9508323 9.5286776 9.8557996 7.5033750 6.2455774 0.3069621 14.8442273 11.9369414 1.0439744 9.0740588 NA 4.2138683 8.5675051 10.8081515 7.3293452 11.5815501 9.6153168 10.3753082 -0.2780587 10.9888018 10.4159378 7.0027858 7.3219281 NA 9.5533225 15.3359773 7.8909628 10.6334072 9.9351195 9.0097276 2.4224483 7.1896210 7.7526824 8.5643656 10.3102614 1.3069621 5.6877998 8.0707435 8.8370589 10.7698208 6.9604202 6.1649592 5.1143337 10.4107027 11.5539162 2.3069913 14.3440957 5.4634819 6.4085166 12.0390038 15.7952259 12.6249556 8.0707435 9.4163732 10.5962282 9.6411690 10.5461784 4.4224550 9.0246541 12.0550308 10.4384061 -1.2778838 10.5973807 8.7513024 0.7220288 2.8983438 8.6601246 10.8341289 9.3404007 9.5229151 16.1831429 10.2387002 8.4752320 6.9019240 3.6762110 14.2645937 9.1409220 13.1282867 11.9648916 9.0085729 9.2118632 7.1566434 9.8025396 -0.2856000 0.0455070 0.0831980 0.0489720 0.0218840 -0.2572100 0.0427320 -0.6325600 -0.2566000 -0.5964300 -0.5964300 -0.2435000 -0.0033243 0.0216570 -0.6085400 0.0434400 0.0434400 0.0077368 0.0549450 0.0365120 0.0209030 0.0072217 -0.0131270 -0.6368900 0.0298880 -0.0372180 -0.0372180 -0.0372180 0.7057000 -0.2856000 -0.2856000 -0.2909600 0.0567980 -0.1725900 -0.2572100 0.0536640 0.0536640 -0.6325600 -0.6334900 -0.3055200 0.0454240 0.0606510 -0.5964300 -0.6077700 -1.2258000 0.0396190 -0.6720500 0.0216570 0.0216570 -1.0534000 0.0431570 0.0549450 0.0537740 0.0537740 0.0383470 0.0209030 0.0072217 -0.6161400 -1.2494000 -0.6368900 -0.6239800 -0.0372180 -0.0372180 0.6997600 0.0224440 -0.3105100 0.000 0.000 -0.609 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.616 -0.645 0.000 -0.288 -0.288 0.000 0.000 -0.286 0.000 0.706 0.706 0.000 -0.305 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.633 -0.262 0.000 0.000 -0.591 -0.244 -0.510 0.000 -0.204 0.000 0.000 -0.609 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.616 -0.645 0.000 -0.288 -0.288 0.000 0.000 -0.286 0.000 0.706 0.706 0.000 -0.305 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.633 -0.262 0.000 0.000 -0.591 -0.244 -0.510 0.000 -0.204 9.0439435 14.5484893 5.4499344 10.1592472 3.0439394 10.4806549 0.7220288 NA 9.2698738 8.6921210 NA 7.3367252 4.3658745 10.0927027 9.7346399 2.0439394 6.6527532 9.3293456 10.0751621 11.1073385 10.1814623 6.8869220 10.9329909 3.2455717 3.8512993 10.3753082 2.1814524 NA 9.9124572 1.7220288 12.9304782 12.5540152 7.3404011 10.0685289 8.5148056 10.3408595 4.5033742 1.5293712 0.3069621 9.9870443 9.4207199 10.0757135 10.2033102 2.1814524 7.9447138 9.2158708 9.6175905 5.0795658 9.8730319 NA 10.7564703 4.5799947 3.1814524 9.7150103 7.5090038 -0.2780587 9.4482334 7.4567248 1.0439744 6.0707435 13.8725559 1.3069621 10.5827142 NA 8.2937677 3.5800007 7.4499360 9.2436158 12.509102 7.152467 8.569073 12.749662 9.212866 11.107338 11.804497 10.196228 8.987630 10.018931 12.773309 10.024083 8.564366 10.082314 -1.277884 7.189621 11.120492 11.7645297 6.4702082 8.7092793 9.2048232 7.5799962 9.8653985 7.5862010 3.8919441 11.4588400 7.5033750 3.1814524 5.1977475 7.8233870 10.2761244 9.9858712 9.0082496 9.4224550 8.4085157 2.7220069 7.3293452 10.2655304 11.2048232 9.9161565 11.0674205 8.6586532 10.0506902 10.4302973 7.2337683 2.5293712 10.7698208 8.9155406 10.3404007 10.4107027 6.1732254 13.7424310 10.8051622 11.0959679 12.2801968 11.2604467 8.3837933 0.7220288 TCGA-UU-A93S NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 NA NA NA 2 6 2 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.5892026 0.5332643 6.8370236 10.7823558 NA 8.4669330 -0.4667357 8.3178770 10.3389862 9.1163252 8.6365304 7.2474880 7.9885694 10.4706162 1.5332643 9.0665723 9.3063816 9.4371243 6.9761860 1.1182268 10.5119528 11.3191035 12.8579855 9.2162371 9.9479276 9.9287765 4.0568003 10.3573181 1.1182268 1.5332643 6.4521061 10.8087849 12.3855768 4.0568003 18.5381733 10.6060449 11.7665624 5.5993327 NA 4.5776343 7.6573635 1.8551525 4.2336810 11.5183728 -0.4667357 12.5666654 10.4513602 1.5332643 10.3059776 10.4954155 10.4550834 6.0410370 2.9926778 15.3758729 10.6411003 NA 8.3534212 NA 2.7031672 9.4565698 9.3146020 8.9510950 10.1442672 9.0762742 9.5735321 -0.4667357 9.9071950 9.3080295 4.8907920 8.2747094 1.5332643 8.6153913 13.6741520 6.1132379 9.1049949 9.8819706 11.3751998 -0.4667357 1.5332643 4.7811708 8.2406015 11.2843680 NA 5.4874381 8.2645613 9.7181177 10.3755927 2.9926778 3.9926778 2.9926778 10.2388747 11.7448265 3.2336887 13.8472591 5.0250953 4.8551725 9.4461317 13.3863570 11.8367378 9.1896672 10.9180261 10.1479523 9.4535952 9.5735321 2.1181936 8.8797560 11.8711430 6.3912230 NA 10.6625254 6.7811695 2.9926778 1.5368487 8.9104530 11.0039013 9.9201827 7.9169465 15.3514750 9.8255640 9.0150417 6.7620617 2.7031672 14.0559465 9.4595384 12.1502506 11.3993622 9.6867945 8.5019092 7.3534212 10.2544868 1.1558000 1.4312000 1.3499000 -0.0128510 0.4472800 -0.0328600 0.8942700 0.0245480 -0.4495400 1.3193000 -0.8992400 0.8538300 1.7339000 0.0000000 -0.0335410 0.4099400 0.4099400 -0.4387500 -0.4482500 0.8603600 -0.4442600 0.0139110 0.6651200 3.6569000 -0.3743700 0.3399900 -0.4542600 -0.4504000 0.0465590 -0.4090400 -0.0070576 0.0286220 -0.0066653 0.5318600 -0.0283550 0.4439200 -0.0049844 0.0245480 -0.9553300 -0.5028400 1.3042000 -0.0135890 -0.9643000 -0.0947240 -0.0630110 -0.0630110 0.0331270 0.0000000 -0.4783900 -0.4515800 0.4099400 -0.4411300 0.0076392 -0.4241800 0.8270600 -0.4314800 -0.4576800 0.0291840 -0.4148700 -0.3906300 -0.4573600 0.4735800 -0.4274600 0.0044411 -0.0797420 0.0609360 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 0.340 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 0.340 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 6.5444699 10.9099105 4.7031672 8.0130228 0.7349155 10.9526760 0.5332643 NA 9.6867945 5.6207066 NA 4.9595059 9.7776063 11.3235909 9.3787325 4.9255580 4.9595059 8.5019092 9.5219270 10.8192225 9.7144071 6.6625260 12.1612322 -0.4667357 4.5332394 9.5735321 NA NA 10.8295850 1.5332643 13.5536147 12.0930974 6.4036069 8.9967667 11.3755927 9.3896679 0.5332643 2.5332394 -0.4667357 3.4401283 8.7056701 11.2835306 8.0685177 2.1181936 10.5616803 11.1414972 10.0849507 6.1770986 9.1087816 NA 10.1182049 3.2336887 3.3405908 10.4023426 6.6392553 4.1182019 9.3989756 7.3724463 7.4280603 0.5332643 13.5710467 NA 11.2193052 NA 10.7536207 5.2881297 7.8641595 10.0587632 11.0752537 8.2645613 8.8686328 18.5381733 10.4691441 12.5547429 11.5183728 9.1644195 9.2492045 8.8047054 12.9904950 9.8663977 8.2406015 10.1021485 -0.4667357 7.3146023 10.4005212 10.0868717 6.4757561 8.6521835 8.4610202 8.8023690 8.9945172 4.4401350 4.1182019 9.2162371 9.7704523 2.1181936 11.3649455 7.8633971 12.2537004 8.9039297 8.0008479 9.4874387 6.5885243 3.9255627 8.9510950 9.8035377 9.8347385 9.7341411 10.2872947 7.7279994 0.5332643 10.8918167 8.0130228 5.8370223 10.3755927 3.9255627 9.5830909 10.2388747 7.3976139 13.9316521 10.5176608 10.7218312 11.8017844 11.3830384 8.9906234 0.5332643 TCGA-B6-A3ZX NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.343418e-07 3.615481e-07 11.6722258 5.4983562 6.6995336 11.1007649 NA 10.1269691 -1.5994621 9.0333203 11.6498831 11.1113468 8.9140526 7.9815256 8.7222532 9.6134294 6.0798048 9.7261928 10.0771638 10.3967986 8.8871603 4.1552149 11.3424731 9.8401560 11.5135790 11.1678889 9.6249298 10.3336470 9.3624982 11.1379844 4.6291409 1.2077055 9.8017381 11.1916916 13.2165088 7.9336547 11.4477899 11.4932474 9.8150103 6.4717874 3.4003193 7.9120780 10.1286709 10.2032453 7.6694520 7.4877878 -1.5994621 10.9670927 10.7298412 8.3310625 9.9734563 10.4748012 9.3199333 4.5901469 -0.5996807 14.7990455 10.6155548 2.8597509 11.1113468 NA 5.6387313 10.4606833 10.0477836 9.7205617 10.4737973 9.7429554 10.4278856 5.3191880 11.3036422 10.7548500 5.0296826 7.3251372 3.4877822 7.8658916 15.0114220 9.0852666 11.6799357 10.2610242 10.7496064 2.7926472 -0.5996807 9.7312420 8.9150392 10.6816756 NA 1.7222474 7.8139530 11.2068747 10.2985486 3.2583079 8.2676037 5.1552109 9.2442461 11.8969293 1.7222474 12.9433570 6.0868262 6.3132150 10.8991743 12.5887595 12.6034437 8.1076842 10.3292135 10.7636386 10.7468388 11.2119005 5.6671115 8.7301216 11.0191695 9.3079669 1.4003193 10.5799233 9.4136478 4.4447201 4.5706511 10.0328661 11.4494930 10.9302437 9.1128521 14.3565652 11.2637371 9.1510320 7.4171335 2.4003193 12.7188680 7.8981769 12.7629539 12.2847819 10.1610451 9.4556075 8.0477837 10.4779954 0.05480300 0.05480300 0.05480300 -0.06772600 -0.06772600 -0.01723400 0.35920000 -0.04631200 -0.04631200 -0.03408300 -0.03408300 0.55089000 0.08074500 0.00104130 0.08132200 0.08132200 0.08132200 0.01014600 0.01014600 0.68087000 -0.14644000 -0.05253100 0.09188000 0.10162000 0.10162000 -0.09393100 -0.09393100 -0.09393100 0.00569190 0.05480300 0.05480300 -0.11268000 -0.06772600 -0.03045200 -0.27655000 -0.12584000 -0.12584000 -0.04631200 -0.04631200 -0.04631200 -0.03463100 -0.10395000 0.00097064 0.05865200 0.05865200 0.05865200 0.05865200 0.00104130 0.00104130 0.08132200 0.08132200 0.01014600 -0.06920000 -0.06920000 -0.17193000 -0.14644000 -0.12784000 -0.11090000 0.09188000 0.10162000 0.08695600 -0.09393100 -0.09393100 0.00569190 0.02848100 -0.10552000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.8404157 12.1201418 3.8921773 10.2422825 9.0214611 11.5381168 9.0762822 6.5347511 9.0141145 7.8720001 7.5702504 7.5088493 4.2583079 10.0833198 9.4831394 2.5702443 10.4087538 10.2153080 9.1734643 9.9969808 9.6027122 7.5677432 10.5427514 1.7222474 7.4143453 10.4278856 5.1947411 NA 11.3345689 3.7926472 13.2673142 12.4684316 6.3833189 9.7958593 7.9946499 9.2852589 4.2829661 2.7222474 -0.0146453 2.9238908 9.1701629 9.7677399 7.6694520 3.9549128 8.8380148 7.6482526 9.9558729 7.9871651 10.5608269 -0.5996807 12.7323617 5.9472196 4.4226905 9.2575130 7.5251700 10.3982102 9.4884509 8.8720004 10.8271140 3.7926472 13.7073836 2.2076742 10.8244914 1.8597708 10.1222788 5.3890092 8.8276380 8.1042287 12.918463 7.444719 8.364666 11.447790 11.057320 9.821338 7.487788 9.902162 9.248839 10.948184 13.941694 12.177169 8.915039 7.252074 4.550070 8.140106 11.214507 10.983643 5.619492 8.495722 9.503613 8.201225 9.651376 10.328473 8.970181 11.167889 10.726474 8.430992 9.648253 8.360819 11.658008 11.788342 7.817777 10.212904 9.302700 10.177169 9.720562 10.617071 10.733481 11.138629 10.744898 8.601224 NA 10.631186 7.901943 10.779433 10.298549 5.498356 11.026566 9.244246 8.131950 13.768933 10.097727 10.416437 12.550945 11.865892 9.469775 3.354523 TCGA-B6-A400 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2.447403e-06 5.840393e-07 11.9392476 4.1105470 4.7197584 12.6850917 1.0352720 10.1317851 NA 9.1295244 11.2828466 10.2899494 9.3584738 7.2051833 9.0416843 10.7458186 8.0718243 8.3403428 9.0889901 10.4832269 8.7930053 8.9343991 11.1116920 11.6566560 12.3636926 10.5796706 9.7152408 10.4211205 6.0223190 10.7827295 7.4275752 1.5498170 7.5788421 11.8887905 13.1541529 8.7086935 12.1335723 11.1344180 10.6391494 7.7076835 5.2051813 10.7250066 9.4852910 9.6573099 9.3789197 6.4373559 NA 11.5582599 8.4970299 8.2599489 10.0143771 10.6126870 8.4651133 7.4899980 2.0352720 14.6552401 12.3802998 2.8717648 8.8590803 -0.7720125 4.4567207 9.9382792 10.2746862 9.2037513 8.4385744 8.2066134 10.6755031 7.9421485 10.2436667 12.1193072 6.2939921 6.9003283 0.8128678 6.4993660 15.9048520 8.8579518 10.5832543 10.4245053 9.7743155 3.8717550 1.3978030 8.6594009 9.2825075 8.7016090 -1.7720125 7.1257482 8.4078124 10.7314805 10.2763901 5.4275760 6.3928103 6.4567224 8.1704178 11.9967078 2.6202110 13.5072599 6.5498309 6.9659955 12.2043778 14.0023557 12.1980091 7.6051135 10.2575355 10.9691595 10.7668051 10.2875856 4.0352544 8.7475395 12.1436892 10.9551856 0.2278643 10.7798517 9.6990704 6.4078116 4.4006336 9.3858816 8.9575240 10.4340018 8.5063528 14.3601218 11.2843716 9.3814551 7.4639175 3.3571860 11.2394799 7.7534240 12.8479512 11.2887680 10.3308631 10.4309453 7.6562632 10.9510522 0.85146000 1.66650000 0.51333000 -0.00401620 1.07270000 -0.02051400 0.57612000 0.66253000 0.02300500 0.79510000 0.79510000 1.16980000 -0.04712400 -0.03626500 0.16115000 0.16115000 0.16115000 0.46177000 -0.03572100 2.06680000 -0.02359200 -0.16891000 -0.07000100 -0.07000100 0.37084000 -0.13419000 1.68050000 -0.11757000 0.56490000 -0.48869000 -0.00055444 -0.11756000 -0.02034600 -0.50929000 0.01754400 -0.49705000 0.17211000 0.66253000 0.02300500 0.03721700 -0.02534600 -0.07506700 0.40512000 -0.05698100 -0.02575600 -0.06319500 -0.03989000 -0.03626500 -0.03626500 -0.03425000 -0.48321000 0.46177000 -0.03572100 -0.03572100 -0.50585000 -0.02359200 0.17815000 0.00463570 -0.07000100 -0.07000100 0.06881500 -0.13419000 -0.11757000 -0.16497000 -0.49788000 0.23287000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.372 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.459 0.459 0.000 0.000 1.170 1.170 0.000 0.000 0.000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.372 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.459 0.459 0.000 0.000 1.170 1.170 0.000 0.000 0.000 8.4373568 14.2216819 1.6873295 10.4272688 3.3153633 12.4761273 2.4758372 6.7076835 8.7977588 11.4087448 8.1586405 8.8614161 5.1467652 10.2852181 9.5688659 6.0158053 6.9283431 11.1134089 9.2229637 10.7836906 8.2118659 6.7317290 11.5025726 1.5498170 9.2123218 10.6755031 5.8499542 NA 10.6893827 3.9003258 11.7445882 12.8579428 7.2080431 9.1097818 10.3924959 11.4807164 4.6541663 3.6873295 0.2278643 6.5810499 9.2661362 9.9541214 7.4923459 9.1857308 10.1151390 8.7056614 10.1879052 6.1586400 10.3193386 1.3978030 12.0948923 4.3153633 4.3978303 9.0983682 7.4931197 1.9283514 9.5548944 7.7495034 4.2279028 6.1287697 13.4278439 0.2278643 11.1926051 2.5498416 8.7534240 4.0092665 8.0432865 7.6245082 13.619868 10.121584 8.035258 12.133572 10.507473 10.963248 6.437356 11.273151 9.055246 10.844682 13.959381 12.391631 9.282507 7.735698 4.782492 8.515615 10.481455 11.2401785 4.9421485 8.1196871 9.7117189 8.4579238 10.3786057 7.5040276 5.5677523 10.5796706 11.8541826 -1.7720125 9.7026231 9.3416258 12.7451420 10.7352024 7.7376780 10.2041093 6.8608983 7.5876530 9.2037513 10.3648943 11.2628741 11.7128520 10.6105272 7.5964097 NA 9.0069165 7.2300435 4.4177310 10.2763901 6.8015506 11.1122645 8.1704178 7.9794475 13.7544330 9.6212937 9.7381728 12.2663078 11.4417668 9.0928631 -0.7720125 TCGA-WT-AB44 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 NA NA NA 1 2 2 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9707697 5.0259103 5.1302472 10.5965260 NA 9.6361979 -0.2960134 7.8332665 9.5431869 10.7039831 9.8863776 7.5743475 7.4454503 8.9158716 8.1837634 8.9940021 9.4738210 10.1406947 7.6168723 NA 11.7636656 10.3834632 9.2314602 10.5249599 8.7429022 10.5233640 6.6464982 9.9085543 NA 2.0259147 6.7914455 11.1344358 12.8048097 5.1958358 13.1990887 12.5906324 11.0882273 7.5113384 1.2889491 7.1958367 8.7456424 9.6826936 8.2392586 12.5839493 NA 10.9899633 12.7337880 7.7861324 10.8832703 10.8435345 7.3974701 6.9231516 -0.2960134 13.1704994 12.0337795 0.7039866 9.4044229 NA 2.0259147 8.1427749 9.4588706 9.4250824 10.0538173 9.6435624 9.9195162 0.7039866 10.7741041 9.9554655 5.2889454 7.1797170 9.7429022 8.9847540 14.1356114 5.6130365 9.0031912 9.6726500 7.6812630 4.2889491 1.7039866 8.0393737 7.4113423 11.2528051 0.7039866 5.4588708 6.8938075 8.6228465 10.9719402 6.8638542 4.2275486 3.8739116 9.1918232 11.3768505 1.2889491 13.3449059 5.8125085 7.3550348 12.5231644 13.5718410 13.0891715 7.9986040 9.7673782 10.4259368 9.9530966 9.3278647 -0.2960134 9.3657612 10.9530966 11.9039622 -0.2960134 10.3693191 8.1797166 2.5113415 3.0259147 7.6048497 10.8925720 9.6983366 8.8409743 15.9472130 10.2547300 8.6376740 9.3020357 1.7039866 14.1293958 7.5368735 13.0509124 14.4259902 8.9328018 10.2898846 7.5431873 10.1857826 0.731320 1.855500 1.855500 -0.085633 -0.085633 -0.384590 0.059080 0.014609 0.014609 -0.180550 -0.180550 -0.205060 0.033510 0.033510 0.024689 0.040077 0.040077 0.030029 0.012148 -0.079077 0.384030 -0.744290 -0.182950 -0.199520 -0.202730 -0.226990 -0.226990 -0.226990 -0.198620 -0.721720 -0.775180 -0.021265 -0.085633 -0.384590 -0.403960 0.000000 0.000000 0.014609 0.014609 0.014609 0.396290 0.380270 -0.180550 0.015308 0.015308 0.015308 0.062794 0.033510 0.079735 0.024689 0.014663 0.030029 0.012148 0.012148 -0.079077 0.384030 -0.744290 -0.740980 -0.182950 -0.202730 -0.163450 -0.226990 -0.226990 -0.225250 0.049256 -0.714970 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 0.536 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.722 1.134 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 -0.378 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 0.536 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.722 1.134 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 -0.378 8.1551942 13.0239375 5.7700732 10.2973743 0.4947740 10.7291228 NA NA 9.4935168 7.9279847 -0.2960134 6.5619645 2.2889491 10.0692120 9.8676329 1.2889491 7.7096077 8.8764107 9.2078089 11.5253586 9.3223687 6.3764085 10.0681179 0.4694693 9.9495360 9.9195162 4.2889491 NA 10.5866262 2.7039866 13.4313719 11.6823361 7.6406209 9.3939811 7.6639850 10.3442281 2.5113415 -0.2960134 NA 4.2889491 8.4655346 11.2231280 10.4353022 5.3478393 9.6982942 8.9255702 10.0984459 3.9519141 9.5337058 1.7039866 11.2884760 2.2889491 4.4044195 10.0849528 5.6727648 3.1634182 7.6812630 7.9660780 6.8938075 3.8739116 14.6267534 NA 10.5494732 NA 8.9328018 5.1958358 7.3186928 8.7807989 11.6586775 4.1634182 8.1386112 13.1990887 10.6486952 11.6972754 12.5839493 10.0337795 8.7781248 9.7053913 13.6425520 10.6876894 7.4113423 9.8888584 -0.2960134 7.4787704 10.0259112 11.0979099 3.9519141 8.4420755 8.7318892 5.1958358 9.2895841 6.1958358 4.7483754 10.5249599 8.6523502 3.8739116 6.3621946 4.0516505 10.4951461 11.4272175 7.8838920 10.8782847 4.4588675 4.4044195 9.4250824 11.4117737 10.9322006 8.6898250 10.2973743 5.1634142 NA 10.1293144 6.2275447 5.6581801 10.9719402 7.8537306 10.8600663 9.1918232 7.4044229 14.4786158 9.3639790 10.6589065 12.7332704 10.7517887 10.1354807 0.7039866 TCGA-AC-A3TM NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 4 NA NA 1 3 3 3 5 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.864303e-07 1.064066e-07 10.9281875 5.5046109 5.9587847 11.1804253 NA 8.6567927 NA 7.8465949 10.7226155 10.5005460 9.1576693 6.5818528 7.8803439 9.8522750 7.6584150 8.3283585 9.4410118 8.8003324 5.9900359 3.8149503 11.5992677 11.1125314 9.9744953 10.9922886 8.6952241 9.5198572 7.2658944 9.2764950 NA 2.0306892 6.1181417 10.6285238 11.8032090 5.9587847 13.2923814 12.4636840 10.6896830 8.1983753 3.0306715 7.3566078 9.7023175 7.7403367 7.2870179 11.9463916 2.1826923 12.0779536 13.8115369 6.5260892 10.8892670 9.8515662 6.7249394 7.3283590 0.8607642 14.0298220 10.5387898 1.4457267 7.8061971 NA 3.3843123 8.0105001 9.3705281 9.6231353 10.3803894 8.3566082 10.0567405 3.9051487 9.1098667 10.0136718 8.2161041 8.0231444 6.1086813 11.2815029 13.6987260 5.0645423 9.4662327 8.4919300 7.5852668 4.2530741 6.1086813 8.6761366 6.7187342 10.2812398 -1.1392358 4.7187342 7.4973776 8.8536916 10.8719804 6.8207546 4.5046077 4.2183085 8.6355404 11.8733777 5.5472524 13.6469207 7.1645339 6.1086813 12.2385060 13.3966968 11.3513534 9.7743906 10.7811061 10.2546799 10.1257822 9.6106226 1.1826923 10.3104177 11.2072669 10.8441031 NA 10.1110517 7.9187452 NA 3.3843123 8.4115000 11.4518080 9.1380406 8.4588056 15.1096258 9.4315576 8.0530462 8.0774988 3.6156399 15.1885163 10.8723299 12.8680433 12.1759027 9.9315449 9.7494964 6.2094807 10.1432799 0.00000000 0.95291000 0.98067000 0.00449060 -0.00161340 0.00074275 -0.01583000 0.00351830 -0.45197000 0.01061300 0.01061300 0.01061300 0.00324060 0.00324060 -0.00057188 -0.00057188 -0.00057188 0.00880240 0.00880240 0.01927300 0.00088144 0.00574150 -0.44109000 0.04519100 0.86997000 0.00240760 0.00240760 0.00240760 0.00365720 0.02053300 0.00000000 0.00588050 0.00449060 0.00074275 -0.00350780 -0.01583000 -0.01583000 0.00351830 -0.45197000 -0.45197000 -0.00479680 0.00088144 0.01061300 -0.00189050 -0.00189050 -0.00189050 0.00316360 0.00324060 0.00324060 0.00046541 -0.00057188 0.00880240 0.00880240 -0.01122300 -0.00488630 0.00088144 0.00574150 -0.63004000 -0.01651700 -0.00022778 0.00560250 0.00240760 0.00240760 0.00727140 -0.00880340 -0.40148000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.972 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.972 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6952241 13.0137510 9.3354732 9.6999569 1.4457267 10.9842280 2.1826923 -0.1392358 9.9065129 7.8691817 -0.1392358 6.6089467 4.4754611 10.0895719 9.4991892 5.8149503 6.7555713 7.8178554 10.7276457 11.5043839 9.1109804 6.0206244 9.6648842 -0.2594610 9.0967673 10.0567405 4.0702090 -0.1392358 10.5050601 3.5611917 13.6029079 12.5382526 7.0105001 8.6256248 7.7249394 10.6584147 2.8607443 0.8607642 -1.1392358 7.3364869 10.1104593 11.6559811 9.3047328 2.5612039 9.2952563 9.5629258 10.3339515 4.7187342 9.2172053 -1.1392358 10.1204965 -0.1392358 3.3201814 9.5296648 7.9035891 3.1086750 9.6264537 7.7187342 8.3586051 3.1086750 14.2849195 0.4457267 10.8979569 -0.1392358 8.4134223 4.1826844 7.5954626 9.2194043 13.294032 7.060426 8.072641 13.292381 10.186059 11.450404 11.946392 11.141234 9.154547 9.689683 13.015571 11.210587 6.718734 10.710549 4.287022 8.153075 8.967970 10.500094 5.518963 8.922799 8.761620 8.077499 9.327972 7.122848 8.084755 10.992289 8.374481 1.668119 8.526089 7.281134 9.892110 9.733428 7.571559 11.218305 4.718734 5.253070 9.623135 10.587397 9.203939 9.775886 10.207267 6.270144 NA 9.920375 5.706243 5.883120 10.871980 5.430610 11.007322 8.635540 7.706243 14.703153 10.862513 9.916713 12.039262 11.555111 9.068988 1.860764 TCGA-C8-A8HQ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 3 NA NA 1 2 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.01252824 6.49736966 7.62633838 11.63590572 1.46393628 9.78531154 -0.53595913 9.38727464 11.20457114 9.88179965 9.89701090 6.90689060 8.62255667 10.08462518 5.59323125 9.11679204 10.12081886 10.27492030 7.65129930 4.59322826 10.83735608 11.26626148 13.92401898 11.27792862 8.67583533 10.49840217 7.15044798 10.80623294 NA 1.63384966 8.35269056 11.69291608 12.00818709 9.49599290 12.96640601 13.07848442 10.34620799 5.54076195 2.16440014 6.50286680 8.43692679 7.51107107 8.25021692 12.22695193 0.02955890 10.68372066 11.71779460 5.57247135 9.64168438 10.81709390 7.43261372 7.06385990 2.16440014 14.41495718 10.22008637 0.78584346 8.55405964 -1.53616832 4.37084082 9.57703808 10.30904507 8.81046078 11.62712500 9.69756673 10.27973059 1.27130614 10.92619376 10.52801616 5.34659174 8.00310578 8.89335372 10.12305105 15.22339321 7.60434269 10.32231667 10.87519328 9.26727103 1.46393628 6.90689060 8.36179248 8.50834110 10.13283206 1.04893365 6.97570011 7.61369445 10.34582580 10.99117970 7.60860524 6.72604237 5.09330241 10.46147945 12.10735238 5.42972977 13.75165947 6.10057194 7.07127786 12.47263832 13.71768381 12.88515724 9.01565534 10.72721629 11.22923323 10.76550615 10.27933037 4.27129867 9.01757650 11.60557531 12.09148097 0.04893365 10.44337230 8.80935238 1.92337741 4.16466562 9.54609613 10.88837583 10.24571657 8.31569619 15.47766232 10.23584922 9.63136516 8.26807830 2.71186930 14.91109492 9.43261393 13.56066225 11.81032231 9.73014794 10.21549114 7.88601172 10.41722690 -0.5978000 0.6224100 0.6062900 0.0414520 0.0084686 -0.0216520 0.0112550 0.0225070 0.0000000 -0.5807800 -0.5807800 0.0126490 0.0180980 0.0196220 0.0262270 0.6298800 -0.5979900 -0.0158850 -0.0101000 -0.0041602 0.0341070 0.0310080 -0.5742700 0.0474600 0.0474600 -0.1967500 -0.1967500 -0.1967500 -0.2455800 -0.5704200 -0.5978000 0.0243740 -0.6040000 -0.0290440 -0.0216520 -0.0069252 -0.0069252 0.0231400 0.0000000 0.0134710 0.0106900 0.0127890 -0.6258800 -0.0035800 -0.0035800 -0.0035800 0.0206840 0.0196220 -0.5965300 0.0262270 -0.6039500 -0.0158850 -0.0101000 -0.0101000 -0.0041602 0.0341070 0.0310080 -0.5826800 -0.5742700 0.0474600 0.0263680 -0.1967500 -0.1967500 -0.2455800 -0.6309300 0.0746900 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.568 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.366 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.568 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.366 9.30393825 14.70078349 5.94776199 10.30786814 5.06386098 11.06919511 3.27130614 NA 8.01853570 10.04137592 -0.53595913 7.75348219 5.20541597 10.92670495 9.40132093 2.37083385 8.41959704 8.99044637 10.13858079 11.31998349 9.52552081 7.08965598 11.21109113 2.46393628 8.60093835 10.27973059 4.16438404 -1.53616832 11.26363347 3.41814946 12.08038109 11.78404247 8.91206329 10.04890954 8.90273898 9.96030159 4.83898705 2.16440014 0.04893365 1.92337741 8.83898642 9.89283072 10.11140553 3.16438404 8.85330956 8.20541402 10.07127746 6.01084249 9.63324574 -1.53616832 10.12438875 3.32192809 3.59323424 8.88897424 7.26740002 6.65377230 9.37833214 8.43117330 9.67096140 1.46393628 13.60369828 1.04893365 10.44907744 0.78584346 8.20372778 4.41814271 8.04326302 9.56329486 13.523226 6.781360 8.690359 12.966406 10.460774 10.866959 12.226952 12.803797 8.489086 10.269691 13.200613 9.968766 8.508341 10.336237 3.048916 7.463947 12.087028 11.430453 6.277728 8.517873 9.148696 8.836812 10.354515 7.673400 5.963793 11.277929 7.508341 2.271306 9.262419 7.732770 10.445158 9.946251 8.369334 9.498058 9.762583 6.923379 8.810461 10.626653 11.067110 10.551741 10.555052 8.212140 NA 9.631309 8.370432 7.735410 10.991180 6.939680 10.578991 10.461479 7.202343 12.964789 9.776830 9.898575 12.242435 11.442836 9.738325 2.987503 TCGA-B6-A409 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6.118507e-07 2.781139e-07 12.42609138 5.88609893 6.18614396 10.85918665 NA 8.26580302 NA 8.16871373 10.53645569 9.60078749 8.83377498 7.48649155 7.24478528 10.26692062 7.46068196 7.97993501 6.58534416 11.23587344 8.61956964 3.96165111 10.72469281 12.88954870 13.22048022 10.13769576 9.07571071 10.12419525 5.79815163 9.92576553 8.22805386 0.34698525 6.53181498 10.40898608 11.11201882 5.36930943 12.15931786 12.09429381 11.08037906 7.15751166 4.45546532 8.71980497 8.43307629 8.35256434 6.50175759 7.28357828 -0.06809006 12.09659993 9.72197941 9.38859920 9.99180115 10.01848104 7.72631831 6.79815163 -0.06809006 13.76930572 10.88997183 0.34698525 9.71762742 NA 3.77320516 8.70339179 9.08756414 9.31776488 9.52124159 9.05429906 9.86755860 7.39406392 10.63465234 10.08587673 5.64156048 7.47622289 2.51687244 8.75633081 14.77778452 5.74414495 9.82773012 9.21499076 9.01405144 0.34698525 0.93190994 7.34694005 8.02465988 9.75420774 -0.65312819 3.55639263 7.61840312 9.36930769 10.01803865 4.41303211 4.22958023 6.25982987 9.14945627 11.53351853 4.22958023 13.40966075 4.78988572 5.92436835 10.53738198 14.05051917 11.71980505 9.23568327 10.65698467 10.51435812 10.05989682 9.86608470 2.80636531 9.07825891 10.75924515 9.94499252 2.93190994 10.71844443 9.48840856 2.43440138 5.91223309 8.67673637 8.87050189 9.10349633 9.31200278 15.08269431 10.12131528 9.76003893 5.79815163 2.04736389 12.38225461 7.36374843 12.33455928 12.27758492 9.24554130 9.45088338 6.71762708 10.29978681 0.217100 1.170200 1.673000 -0.261830 -0.273340 0.287820 0.594260 0.444220 0.386950 -0.376590 0.221100 1.882500 0.625830 -0.254080 -0.259420 0.089809 0.089809 -0.312980 -0.273060 -0.280280 -0.259060 -0.249620 -0.205370 -0.205370 -0.226710 -0.169840 -0.212590 -0.210850 1.806800 -0.291570 0.217100 -0.029872 -0.261830 -0.271800 0.285120 -0.271970 -0.271970 0.444220 0.340100 -0.279450 -0.079780 0.347740 -0.376590 0.079085 0.079085 0.079085 -0.496450 -0.254080 -0.254080 -0.259420 0.089809 -0.312980 -0.273060 -0.228250 -0.264840 -0.259060 -0.264970 0.570180 -0.101090 -0.205370 -0.343410 -0.169840 -0.212590 0.240890 0.271070 -0.133970 0.618 0.364 -0.259 0.000 -0.273 -0.273 -0.280 -0.259 -0.265 0.000 0.524 -0.205 -0.205 -0.337 -0.337 -0.213 -0.213 0.774 0.774 0.241 0.241 0.271 -0.132 0.219 0.000 -0.262 -0.262 -0.026 0.236 0.594 0.414 0.444 0.340 0.000 0.348 -0.155 0.221 -0.496 -0.496 0.000 0.618 0.364 -0.259 0.000 -0.273 -0.273 -0.280 -0.259 -0.265 0.000 0.524 -0.205 -0.205 -0.337 -0.337 -0.213 -0.213 0.774 0.774 0.241 0.241 0.271 -0.132 0.219 0.000 -0.262 -0.262 -0.026 0.236 0.594 0.414 0.444 0.340 0.000 0.348 -0.155 0.221 -0.496 -0.496 0.000 7.3069421 12.7435448 1.6688907 9.5049185 3.2653319 11.9973186 0.9319099 9.6772966 9.4350658 7.9542702 6.9431302 8.1750764 9.1478399 10.9810704 9.3363345 5.2538305 6.7898831 10.2064747 5.8626398 10.8746614 9.2210145 5.7392568 10.9106130 0.9319099 9.0042584 9.8675586 4.1018265 NA 10.5966461 1.5168724 13.3683538 12.5554792 7.4890467 10.1064121 9.0993207 10.2033655 2.6688680 1.8063653 NA 3.5948710 8.8655932 11.1881111 5.6598218 4.5367616 9.5590046 10.3199198 9.9044037 5.3242202 10.4950987 8.5984225 11.4912796 1.5168724 1.9319099 10.2945440 7.5989428 4.5948650 9.1051631 6.4915982 7.5017584 9.5305753 13.7558004 0.3469852 11.7305093 4.3469427 10.3270796 4.7044902 8.5745561 8.9262560 12.165806 7.613727 8.868540 12.159318 9.104330 12.224799 7.283578 10.105996 8.623064 9.191646 13.159719 11.747819 8.024660 9.062902 4.455465 6.965326 11.317765 9.758451 4.870503 9.224991 9.060327 7.521866 9.109646 6.223457 6.700087 10.137696 6.760568 3.346943 9.319920 9.590227 12.590412 9.383800 7.730644 9.740330 4.369306 5.506811 9.317765 10.251575 10.532125 12.628363 9.439697 7.481366 NA 9.859508 6.265803 5.668868 10.018039 4.074856 9.256083 9.149456 8.025117 14.493608 10.345883 10.310197 11.698155 11.942780 8.218845 1.806365 TCGA-C8-A9FZ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA NA NA 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0751280 0.0160450 0.0346770 0.0284810 0.0596510 0.0806010 -0.8949600 0.0577960 -0.9088100 3.6569000 0.8998900 -0.9847000 0.0066369 -0.0071845 -0.0150540 -0.0150540 -0.0121620 0.0315770 0.0315770 0.0454240 0.0478360 -0.0284910 -0.9750900 0.7617200 0.8492900 -0.1442500 -0.1442500 -0.1272000 -0.0419740 -0.0911550 -0.9037100 -0.0647300 0.0284810 0.0393730 0.0755710 -0.8398600 -0.8884300 0.0577960 -0.9088100 -0.9088100 0.0338310 0.0338310 -0.9689000 0.0382060 -1.2929000 -0.0138150 -0.0138150 -0.0071845 -0.0149180 -0.9562300 -0.9407800 0.0315770 0.0315770 -0.0571160 0.0454240 -0.9348900 -0.0066432 -0.0294480 -0.9905300 0.7617200 0.0232860 -0.1442500 -0.1272000 -0.0419740 -0.0774770 -0.1030300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.229 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.229 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-BH-A6R9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 2 5 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.4333102 3.9890936 5.2735457 11.1569601 0.2886539 9.9228579 -1.2961905 9.7412364 11.1481867 8.8069771 9.3475456 7.1590166 9.0992237 10.1252284 7.3547413 8.8521662 6.8069775 10.7288290 9.3493478 5.8122133 10.9073433 11.0074702 9.2886520 10.0689182 9.1476690 10.4132040 5.8329735 10.5322227 2.7036987 0.7037209 9.3137916 13.5668110 12.6769384 8.7288290 10.9757359 7.6105797 10.8291029 6.1549011 1.5110632 7.9397038 8.7603271 8.9180087 10.8635608 6.4451572 1.2886539 11.3296266 8.2447862 2.6105820 9.9325081 5.3761132 7.0873939 2.6105820 NA 15.2525660 12.7453717 5.0960088 8.4468410 -1.2961905 5.4585756 9.7149167 9.8767419 9.5254635 9.2331199 9.1875052 10.9426912 2.8736164 10.6210615 10.1784094 4.0256136 8.2980140 3.1631284 4.9131431 15.8444194 8.8610618 10.7277902 10.8477103 10.8758044 3.2272482 -0.2963677 8.1383179 8.8984463 11.6381175 -1.2961905 7.2621099 7.7938016 10.0312420 11.5324210 9.2065211 7.0346064 6.7751520 10.7491078 11.5120504 -1.2961905 13.6693385 3.0256136 7.3971766 12.6058761 13.5715956 12.5303372 9.0852324 10.7593108 10.8965987 10.9380968 10.8361892 4.6105820 8.7302130 11.3193191 10.5836555 0.2886539 11.0882034 8.9468633 2.1631122 3.2928554 9.3312233 10.9355107 10.1487043 9.4282033 14.8089023 10.3211569 9.3063883 7.2233260 1.2886539 12.0172811 5.9798127 13.7824657 11.9905359 9.3565345 10.2365323 8.0830676 9.2704474 -0.0796090 0.1538200 0.1538200 0.0064546 0.1563600 -0.0164290 0.1562100 -0.0440090 -0.0440090 0.0000000 0.0000000 0.0000000 -0.0491540 -0.0491540 -0.0013858 -0.0013858 -0.0013858 -0.0206870 -0.0206870 0.1456300 0.1523300 -0.0633010 -0.0087146 -0.0087146 -0.0087146 0.1331700 0.1331700 0.1331700 0.1433500 -0.0796090 -0.0796090 -0.1161300 0.0064546 -0.0164290 -0.0164290 0.1562100 0.1562100 -0.0440090 -0.0440090 -0.0440090 0.1553200 0.1553200 0.0000000 0.1377600 -0.4402700 0.1518800 0.1518800 -0.0491540 -0.0491540 -0.0055375 -0.0013858 -0.0206870 -0.0206870 -0.0206870 0.1456300 0.1523300 -0.0633010 -0.0062395 -0.0087146 -0.0087146 0.1432500 0.1331700 0.1331700 0.1405500 -0.0922130 0.0590800 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 9.2085085 16.5966294 7.3183991 11.9397036 2.8919246 9.3672476 0.7037209 4.8329710 8.8910415 11.9514686 -0.2963677 9.4101855 4.0612405 10.2252899 9.4660716 4.2272482 8.8082882 9.4924078 7.6636912 8.7246694 9.1694292 7.1045684 12.1903988 3.7036877 5.7149159 10.9426912 3.0960088 NA 11.6107679 1.5110632 12.7078221 12.4042375 9.6687522 9.9161858 10.2394508 9.5373702 6.0165721 3.5616683 1.0255958 -0.2963677 8.2811182 9.8928963 6.6403274 5.5365783 8.4527206 6.4652399 9.9174012 7.3036027 9.8817318 NA 10.9204353 6.0787294 5.0960088 9.3241841 5.8253277 7.1215418 10.5262603 10.0418687 8.5094334 7.7426086 13.3413332 NA 10.8223062 NA 8.0634388 5.3619017 8.2055264 8.7764919 12.1631403 6.7093141 8.0278701 10.9757359 10.1098945 10.0023249 6.4451572 11.2311664 8.7589720 10.5928131 13.4553904 10.7967768 8.8984463 8.7684321 0.2886539 7.2811186 10.4430482 12.0215260 2.0256313 8.6090764 8.6270169 7.3036027 9.9511779 8.8291030 6.6636919 10.0689182 6.2961472 -0.2963677 7.7260574 7.1815290 13.7432940 10.1310023 8.1362314 9.7232802 9.7487665 7.0256180 9.5254635 10.9736927 9.6417987 12.1041687 10.2645000 8.6299853 NA 10.3428041 7.9751527 8.1067016 11.5324210 9.2389647 10.6644155 10.7491078 6.6923742 13.9814127 9.9331092 10.2881823 12.5855681 11.3291700 9.4718737 1.0255958 TCGA-BH-A8FY NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 2 NA NA 1 4 3 3 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.9830861 4.4717272 7.4807175 11.0952445 -0.8502204 9.4762302 NA 9.1342191 10.9323894 12.1851153 10.0842287 7.5802533 8.6870190 8.8310390 8.6595757 8.8222260 10.3893991 8.9747593 6.1155847 0.1497796 12.4170263 9.1969247 9.8836634 8.8275202 8.8044366 9.9188120 2.7347638 9.6742640 0.7347421 1.7347421 6.1497999 11.3635125 13.2057609 4.2790849 12.5914481 12.6020419 8.7736822 6.8363016 3.7347638 4.1941974 8.1582295 8.6255342 5.5927441 13.0254540 3.9046864 12.4666478 13.5528127 7.2425577 11.0571721 10.6933158 7.3396256 7.4535818 NA 14.1120266 9.0491575 0.7347421 6.6966950 NA 2.9571531 8.5844289 9.7663495 10.0023301 11.6176609 9.4558623 9.6615533 1.7347421 10.4299914 10.2385889 8.7936570 7.5291791 4.8777197 11.8413261 13.9812564 8.0181295 10.3822216 10.1996492 7.5844289 1.1497796 1.1497796 7.5029471 7.5718656 11.1032696 -0.8502204 1.7347421 7.0981679 10.1673051 11.0585686 5.5927441 4.5760625 3.9046864 9.6184248 12.3136076 1.4717077 13.0073929 7.2104970 8.0716415 12.1306543 11.4888155 12.7938823 8.5399695 10.3719918 10.4095439 10.2465158 10.5948155 3.8502394 9.0186233 11.5581304 10.6664856 NA 10.0967070 8.2451976 NA 4.1985570 9.4259250 10.1526157 8.9409637 8.9667843 15.3170424 10.0278515 8.9130129 10.4632506 1.7347421 16.5751313 9.7562059 12.2456921 11.2027083 9.9952907 10.1039969 7.8080124 10.5402975 -0.00263220 0.91561000 0.87308000 -0.01697900 -0.01697900 -0.01202400 1.69380000 -0.01285100 -0.01285100 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.01307400 -0.00013862 0.88866000 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00805670 0.00903120 0.00903120 0.00903120 0.01267600 0.01642500 0.01642500 0.02216400 -0.00263220 -0.00263220 -0.00995650 -0.01697900 -0.01202400 -0.01202400 1.62150000 1.62150000 -0.01285100 -0.01285100 -0.02037800 -0.00901440 -0.00691950 0.00000000 0.00541390 0.00541390 0.00541390 0.00541390 0.00513590 0.00513590 0.01307400 -0.92354000 -0.00013862 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00805670 -0.95145000 0.00903120 0.00903120 0.01712400 0.01267600 0.01642500 0.02216400 0.01488800 0.02244400 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 1.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.617 1.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3644113 10.8984128 4.6733642 9.0491575 2.4717337 11.3408599 0.1497796 NA 8.7900458 7.0077819 NA 5.5532376 1.1497796 9.8588844 9.7024697 4.5421156 5.5760656 9.0760967 12.5242968 11.1890624 9.5569622 7.1213439 10.8411080 3.8502394 9.5989493 9.6615533 3.2372578 -0.8502204 10.4979755 4.5073507 12.7947835 12.8353160 7.1039969 9.8777211 7.6214761 10.1547233 NA 2.3197335 1.1497796 5.9442166 9.3519244 11.2935027 10.4615490 2.9571531 8.5920601 7.7234480 9.9999875 5.4717272 9.4512968 NA 12.4346248 NA 5.7043906 9.6499254 6.5969664 0.1497796 10.1170269 7.9046882 5.7791573 NA 14.5870651 0.1497796 10.0529294 -0.8502204 6.2583248 5.4165864 8.1155847 8.6908972 13.896474 5.194193 8.738515 12.591448 9.359254 10.973566 13.025454 12.524704 9.642065 9.439819 12.422868 7.853704 7.571866 9.766350 1.957172 7.887893 10.497422 10.6046140 5.5927441 8.6376208 8.5802533 8.4142434 9.4739813 7.2842272 5.7791573 8.8275202 7.9245875 NA 8.9030175 7.3785714 8.8979936 8.7589793 6.6416544 9.3774166 10.5128403 1.1497796 10.0023301 10.7663495 10.7612866 9.2739219 10.4558624 6.6655008 NA 8.7679659 6.9507005 1.7347421 11.0585686 0.1497796 11.4421223 9.6184248 7.2842272 14.9791518 10.5660704 9.8606072 11.7406216 10.3402427 10.2057609 0.1497796 TCGA-BH-A8FZ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 3 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.379306 8.368804 6.720128 11.534241 1.748590 9.712925 -1.251539 9.076137 11.068256 9.326013 9.021214 7.392440 9.098418 10.227859 6.625101 9.600333 10.400084 9.730864 8.236424 7.622028 11.409694 11.508056 11.407019 11.142511 9.014199 10.002431 6.846616 9.665187 1.070527 1.748590 9.106136 13.164128 12.346985 7.083974 14.014638 13.047577 10.437708 6.918509 3.272143 7.895789 8.712925 9.492577 8.327900 11.366969 4.392441 10.821386 11.203654 7.782007 9.362355 10.005972 8.172750 5.191527 -1.251539 13.700822 12.609984 4.174846 9.050080 1.748590 5.462828 9.939643 9.921011 8.895789 10.526661 9.517595 10.154789 4.303174 11.461326 10.658477 8.234413 7.303172 11.243689 9.401429 14.979974 7.632052 11.269203 10.703144 8.079501 3.748579 2.748590 8.623565 8.705686 11.909873 NA 4.106139 7.110527 9.485831 10.661847 5.256377 7.913491 5.363294 9.625101 11.795196 -1.251539 13.292884 6.052364 8.254396 12.371093 12.541984 13.127421 7.056923 10.247932 10.109979 10.050074 11.046360 5.070514 8.486676 11.056354 11.971681 -0.251367 10.370636 9.671168 3.070510 4.248110 9.373379 9.519248 10.095098 9.299331 14.469416 11.675806 9.600333 8.667447 4.748585 14.868336 8.981005 13.797837 13.895192 9.680799 9.033986 7.388828 9.719524 -0.00429290 -0.00429290 -0.00083160 0.00148700 0.00430210 0.00124810 -0.00373950 -0.23496000 -0.23496000 -0.33964000 -0.33964000 0.33286000 0.00013863 0.00013863 0.00055459 0.00055459 0.00055459 0.10818000 0.10818000 0.01293400 -0.00152430 -0.00762190 -0.02192100 -0.02219500 -0.02219500 3.60610000 -0.03463100 -0.03463100 0.00537570 -0.02651400 -0.00429290 0.22746000 0.00360760 0.00124810 0.00124810 -0.00373950 0.25652000 -0.24764000 -0.23496000 -0.23496000 0.04925600 0.04925600 -0.33964000 -0.32843000 -0.00013862 -0.00013862 -0.02627100 0.00013863 0.00013863 -0.33445000 -0.33757000 0.10818000 0.32173000 -0.25914000 -0.33237000 -0.00152430 0.00000000 -0.34446000 -0.36136000 -0.02219500 -0.33306000 -0.38325000 -0.03463100 0.00055459 -0.00013862 -0.02288100 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 9.5551334 12.5504943 5.6793225 10.3838486 5.3779393 10.7650440 6.2484305 1.0705267 8.5639673 9.1159987 1.0705267 8.2161895 3.0705095 9.7612085 11.9224171 4.2080178 10.1225366 8.9761998 10.7020528 10.5175952 9.5552866 7.8957885 11.1935987 4.0705095 9.7005970 10.1547889 7.9433406 NA 10.8538376 3.9185103 13.3985136 12.4992908 7.8855750 9.8187049 11.0503659 9.6227968 9.4832934 2.7485900 0.3335382 4.6065666 10.3160647 9.5917198 9.4959377 4.9580353 10.0761702 7.9334593 9.6896315 7.3669691 9.3824872 -1.2515388 11.1507966 4.7027794 4.7027794 9.2289500 6.6532492 6.8038663 10.6392282 8.7916113 12.9246791 0.7485471 13.7872886 1.3335382 10.3955925 NA 7.2993308 5.6674465 7.6096708 9.1873758 12.385974 5.782007 8.786131 14.014638 10.172225 10.257864 11.366969 11.253155 8.980465 10.715810 13.720083 13.046790 8.705686 7.228364 1.918501 7.854493 9.659976 11.440981 6.631227 8.667447 8.449024 7.989375 9.762458 8.445551 7.539747 11.142511 7.070512 2.996515 6.820046 6.973791 11.614124 10.718690 7.822725 8.724432 11.317015 8.185295 8.895789 10.627401 10.935008 10.459390 10.559959 8.528303 -0.251367 9.348701 9.620043 7.836047 10.661847 6.216189 11.638848 9.625101 7.381688 14.209584 10.262311 10.218226 13.205259 10.435960 9.238432 1.555914 TCGA-PE-A5DE NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 NA NA NA 3 3 2 3 3 2 0 0 0 0 0 0 4 7 0 4 7 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 4 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7.592511e-06 2.614271e-06 11.0198642 6.9532350 6.6428950 11.5366884 -1.1710435 9.9125928 0.4140273 9.2720570 11.6604207 8.9441571 9.3575676 7.6364687 8.7745575 9.6564561 5.7598509 9.5450755 10.5493578 10.2931487 7.5226004 4.4729686 10.8035281 10.2741284 12.7208972 11.3378987 9.3526756 10.5684722 9.0687119 10.3164511 -0.1708811 -0.1708811 8.8857513 12.3642674 12.2993911 6.6300137 11.9583965 12.2505209 9.2490736 5.4438221 2.1510470 5.9788614 7.9532350 8.7117564 6.5773065 12.9657042 -1.1710435 11.5015389 14.0500964 6.8898094 9.9914671 9.8985633 7.7178567 9.2030663 2.2885358 16.6181550 11.3020581 1.1510145 8.0139887 -1.1710435 5.7239326 10.0800040 9.9258287 10.7858527 11.7193778 9.5433590 10.3154458 3.6364738 10.6616080 10.5667834 7.6492928 8.4084295 2.7359987 10.7945371 14.5513340 7.9565144 10.6340512 10.1145158 8.7977802 1.4140814 1.6364506 7.9635400 8.2385046 12.3349251 NA 4.1866669 8.0214064 9.7891154 10.3784169 5.1689629 8.2106562 4.4438254 10.5544798 11.6870945 0.4140273 13.5543733 6.5570332 7.4140763 11.8862591 11.4479578 12.5870243 8.1954357 10.3769720 10.2474932 10.0171583 10.8248806 4.6870943 8.8639124 11.3316967 9.6243415 1.6364506 10.6324375 8.6348575 1.6364506 3.7151795 9.0817790 10.4378304 9.8680325 9.2225039 14.8691677 9.6627942 9.1317525 9.0040392 3.2885505 15.3244689 9.7231734 13.3216552 12.7766591 9.9145860 9.6283952 7.9686651 10.7201301 0.00110930 0.75088000 0.78350000 0.01106500 0.32093000 -0.32100000 0.34827000 0.34705000 -0.33006000 -0.33629000 -0.33629000 -0.33802000 -0.33077000 -0.34517000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00387790 0.00569190 -0.10099000 -0.35110000 -0.35110000 -0.35110000 -0.00456950 -0.00456950 -0.00456950 0.33472000 0.00110930 0.00110930 0.00235810 0.01106500 -0.32100000 -0.32985000 0.34827000 0.34827000 0.35675000 -0.33006000 -0.33006000 0.36561000 0.10570000 -0.33629000 0.34524000 0.34524000 0.34524000 0.34524000 -0.34517000 -0.34113000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00069303 0.00416320 0.00569190 -0.09060700 -0.33756000 -0.35110000 -0.35110000 -0.30345000 -0.00456950 -0.00456950 0.33901000 0.01922300 -0.36533000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 10.363416 12.300027 1.636451 10.031237 6.186665 11.581076 5.288547 NA 8.937638 7.251178 -1.171044 6.829114 1.999026 9.938944 9.511230 2.151047 9.591496 8.929776 10.407486 10.360495 8.995264 7.687094 10.925499 4.584000 8.121435 10.315446 4.783310 NA 10.883379 1.636451 12.871371 12.349855 7.873507 9.458470 8.490892 9.417828 2.288536 1.151015 NA 4.806391 8.513862 10.194889 10.617016 5.238504 6.252944 7.515614 9.752441 4.978859 8.885751 NA 11.118556 5.204152 3.472969 9.639420 6.968972 7.259566 10.409843 8.752441 9.706398 NA 13.575943 2.288536 10.535610 NA 7.876238 5.597299 7.607190 8.478370 12.951228 5.487326 8.173409 11.958397 10.487325 10.511669 12.965704 11.908098 8.912593 10.403707 13.374319 10.319964 8.238505 9.184465 1.636451 7.259566 10.887444 11.411726 5.711756 8.963540 8.758372 7.973772 10.905902 9.489109 9.056730 11.337899 7.593985 2.916572 6.840341 7.785286 9.774557 11.031544 6.794898 9.308894 10.674212 8.033685 10.785853 11.057932 9.897892 10.470262 10.811038 8.481958 NA 9.922194 7.834738 9.128322 10.378417 7.687094 11.192974 10.554480 7.247387 13.710562 10.327963 10.694847 12.468906 10.929776 9.101743 2.735999 TCGA-UL-AAZ6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 2 2 1 2 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 13.4572927 2.5821465 6.7574167 12.1401957 -0.3248164 8.1489727 NA 8.4031876 10.7877066 11.7584140 9.9994478 6.9467297 7.7467293 10.4247176 5.9790490 9.3064443 9.7726409 10.3463659 5.5456317 6.2144260 11.7971244 9.7264760 15.1637193 10.8389168 8.9028831 10.6664347 4.1671170 9.8724839 -0.3248164 0.9971840 6.0675849 9.3361544 12.4002073 5.5941305 17.2314214 13.4029217 8.5866593 6.2751803 4.6294615 4.7837919 8.2432230 5.3334774 6.1830617 12.5564767 1.4826418 11.1285378 13.2799362 1.9971840 10.3145762 10.2149107 6.8501931 5.7413564 NA 15.5819236 9.1499871 0.2602666 9.8644740 2.8451889 2.5821465 9.0782792 9.9704621 8.8822814 9.6511150 8.8798384 9.1130193 5.3617684 10.1130192 9.7909611 8.1140588 7.0675849 7.2375092 11.8783092 13.4550891 7.3232656 9.7798659 10.1464343 8.7890093 3.0675871 8.0306180 8.1428729 7.5791492 8.9629796 NA 3.8847249 7.1057200 10.5176175 10.0734764 7.2788936 3.4826160 3.7627315 9.1150980 11.6314618 5.2451229 13.6166358 7.5761336 6.5332487 10.5799018 11.8455052 11.8957966 8.6864946 10.6777306 10.5787724 9.9261576 10.4259741 3.7196654 10.4517002 11.0503066 12.1349549 1.8451889 9.9531357 8.2621071 1.4826418 3.2602365 8.5911464 11.3256458 9.0931196 8.3476927 15.4089975 10.9276369 8.7877067 9.2733196 3.4301514 14.7728878 5.9231944 10.8074455 9.8288191 9.8363990 9.2095701 5.6752683 10.1635792 -0.6074600 0.8689600 1.1410000 -0.5895800 -0.0059225 0.6168300 0.4480400 0.5612000 0.0000000 -0.6347900 -0.6347900 0.5774100 0.4724200 -0.0389570 -0.6071700 1.6011000 0.5865400 0.5331300 0.5768700 -0.6330900 0.5315500 0.4238900 -0.0136480 3.6569000 3.6569000 -0.0451990 2.9996000 1.0078000 2.6820000 -0.0486140 -0.6074600 -0.1625200 0.0252800 -0.0214800 -0.6331900 0.0285120 0.0285120 0.5352400 0.0000000 -0.0141980 0.5262900 -0.0161790 -1.2929000 -0.0280700 -0.0280700 -0.0280700 -0.0727800 -0.0616600 -0.0616600 -1.2506000 -0.6189000 0.5331300 0.5452700 0.5263000 -0.5966000 -0.6190900 -0.6278700 0.5069300 -0.6461000 -0.5904600 0.0323110 -0.0451990 -1.1815000 0.4636900 0.5022400 -0.6421500 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.614 -0.614 0.000 0.000 0.000 0.000 0.526 0.000 -1.293 0.583 0.000 0.000 0.000 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.614 -0.614 0.000 0.000 0.000 0.000 0.526 0.000 -1.293 0.583 0.000 0.000 0.000 6.9184411 12.3624241 6.5270156 8.1830617 2.9413129 11.7793744 0.2602666 NA 9.5776422 8.0931196 0.2602666 5.5332487 3.3191265 11.3772233 9.5371295 4.7413537 3.9231967 9.2611685 8.3529867 11.7066237 9.9066204 5.7520822 10.5022128 -0.6739229 8.1751129 9.1130193 3.1988241 1.8451889 10.5757567 3.5821585 12.7982569 12.6743863 6.4631696 9.7974480 11.1953947 11.1145786 3.4301514 3.8847249 NA 3.1988241 8.4826220 12.0479962 10.0841275 2.9972021 10.1467951 8.2240890 9.8551762 6.5394535 10.0665108 NA 10.1766068 1.4826418 4.6294615 9.6576263 6.4783652 2.1347138 8.1015319 7.6864942 6.0761465 2.1347138 14.4039849 -1.3248164 11.7475673 NA 9.6871932 4.3191265 9.1681218 7.5851601 13.230298 8.456627 8.805838 17.231421 9.290897 10.916059 12.556477 12.196745 9.435155 10.145926 12.093515 10.676675 7.579149 9.354747 3.675263 10.356066 11.272389 10.4890483 6.1182102 8.3227254 9.7244351 7.7520829 10.4962718 7.0589712 9.5791490 10.8389168 7.2375092 NA 8.5851601 9.0520004 8.6766754 8.4793983 7.1305942 9.1150980 8.2317732 3.6752627 8.8822814 9.8675600 11.1578231 8.7237541 10.2550544 6.7413564 4.1346974 9.1583673 6.1956114 4.9971930 10.0734764 3.8451889 11.3218259 9.1150980 6.4631696 13.1744902 11.1547948 10.5093431 10.4950470 11.2505701 9.2536398 -0.3248164 TCGA-D8-A73X NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 4 NA NA 1 4 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.73328849 6.67300230 7.73388508 11.32400470 1.95251995 10.18090657 0.81500152 9.35262833 11.80427411 9.00187851 9.95661777 7.90036147 8.92980490 9.06294899 8.17257352 9.26870363 10.74042765 9.54973116 7.64537815 1.66302576 11.75210107 9.66801911 12.87165925 11.24212485 9.60618440 10.25048342 4.96882804 10.42272172 NA 2.81502202 7.56455575 11.06318635 12.68098673 6.88969864 12.79715951 13.31466815 9.88809191 7.37267704 3.95252927 6.49871839 8.32123002 10.54939242 8.06294899 13.10826326 4.44728825 11.28405276 13.79919074 6.66301864 10.12681983 10.89450631 8.56321458 3.91935915 -1.50676258 13.63502455 12.14733004 2.66302576 8.21760734 -1.50676258 4.49309648 9.69399199 9.81783651 9.84844455 11.85791208 10.02105908 9.57524255 1.66302576 10.88514252 10.37076107 8.39697547 8.65422536 -0.50696758 12.38383271 14.19098409 9.28755795 11.06484608 10.88003368 8.29883745 3.30044591 3.70254673 9.52651645 8.72191227 10.70801967 -1.50676258 5.27445177 7.44146107 9.75812242 10.51164138 6.51546173 6.02447483 5.70254673 10.14996516 12.09590827 -0.50696758 13.40616984 6.47037417 7.78771389 12.14616241 13.03721268 12.97287372 9.00385771 10.32202322 10.85996202 10.80228556 10.79830022 4.81502202 9.03225213 11.86514227 11.95406120 -0.50696758 10.27650097 8.67051286 0.07806326 4.49579748 9.40673096 10.74959703 10.45779526 9.05533586 14.34428127 10.12745079 9.37650051 9.80427415 3.62237987 15.25237050 9.17608811 13.93331377 12.76148924 9.96171752 10.13830150 8.36499870 10.92476864 -0.01416900 1.35640000 1.36620000 0.21146000 0.21146000 -0.01931400 0.21868000 -0.02041200 -0.02041200 -0.00636680 -0.00636680 -0.02166800 0.00263570 0.00192430 0.00000000 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01505400 0.00045654 -0.44674000 0.02370600 0.02370600 0.02370600 0.02412700 0.02412700 0.02412700 0.32286000 0.01852300 -0.01416900 -0.00622860 0.21146000 -0.01931400 -0.01931400 0.21868000 0.21868000 -0.02041200 -0.02041200 -0.02041200 -0.01464100 -0.01593100 -0.00636680 0.05138700 0.05138700 0.02146300 0.02146300 0.00192430 0.01237600 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01147300 -0.01505400 0.00045654 -0.44674000 -0.75426000 0.02370600 0.02370600 0.00180300 0.02412700 0.02412700 0.30969000 -0.00505830 -0.42495000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.020 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.020 -0.754 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.61721472 13.52212179 8.51546134 10.10365696 2.88541818 10.30486955 0.81500152 -1.50676258 8.67300266 7.71709512 0.81500152 7.16551906 1.95251995 10.13830150 9.88379980 4.37573454 8.35882656 9.36961043 10.90989098 10.43414103 9.49543734 7.75518803 10.16596066 2.07806326 10.33072141 9.57524255 3.24798826 NA 10.35727960 4.77849772 12.86473398 12.06401645 7.21419282 10.23960772 8.05914758 9.30205762 4.39998452 2.88541818 0.07806326 3.19353522 9.42087142 10.01223819 10.29641737 3.53748245 7.55513973 5.91935915 10.51129359 5.67300230 9.20217722 NA 10.78800129 3.19353522 4.53748866 9.71573142 5.95055706 3.98494474 9.82288977 7.69031023 6.60683601 0.49313492 13.76812669 1.07806326 9.85339190 -1.50676258 9.16993201 5.38791048 7.95866001 8.67672897 13.05977127 4.60161927 8.72070940 12.79715951 10.46068001 11.02471860 13.10826326 12.06116831 9.09339670 10.33347796 13.02885482 9.32677416 8.72191227 9.28507018 0.07806326 7.95866001 10.97337873 10.9059279 6.9969197 8.8093749 9.1978617 8.0322524 10.6076947 6.2073385 5.7692190 11.2421249 7.4789354 5.1369501 9.4545432 6.4417524 11.6855404 10.2450559 7.6197981 8.8484445 11.4723400 6.0087939 9.8484445 10.5960533 11.3338714 9.5832058 10.4870933 8.5126840 NA 9.6754629 6.6428402 5.7025467 10.5116414 7.7338851 10.6900029 10.1499652 6.9024849 14.0884966 10.0808709 10.4671494 12.7194304 10.9154210 10.3757365 -0.5069676 TCGA-V7-A7HQ NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 2 NA NA 1 1 3 5 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.14336478 4.30062162 6.09503828 11.28930631 NA 8.39337887 NA 7.64934960 10.16944415 13.62226790 8.94987777 6.24313589 8.06549315 9.85999873 8.38543017 7.36671038 9.28930631 8.30062162 5.56740855 1.62255558 11.06880595 10.64380732 13.10606321 10.98580843 8.28646350 9.37610086 5.08198294 8.68863882 -0.69946623 3.20751808 6.12079981 9.36939996 10.87946601 5.90053356 13.09086828 12.69011850 11.78871279 7.91164665 -0.69946623 8.09503723 7.47054663 8.85521048 6.62254972 11.69508432 -0.07643243 11.88252831 14.10045972 6.54854914 11.30092798 9.86572368 8.63153832 4.05550804 0.30065091 13.25268484 10.18173555 0.30065091 8.73316348 NA 2.47053687 7.79647641 8.62029388 9.09990321 9.02172067 8.01829812 9.93724625 1.62255558 9.15548994 9.22543401 9.11920390 6.00106134 12.78846164 12.03638914 13.34629596 3.38893343 10.34159621 8.93905758 8.05216589 3.00106360 7.15237105 7.58139268 6.04208834 9.49783827 -0.69946623 6.05550804 6.49044658 9.41045220 10.29143469 4.10797236 2.88557436 4.69294044 7.55800966 11.45733676 0.88557436 13.41802121 7.42474325 5.05550804 11.97547593 14.21883266 11.23504962 9.34638120 11.20788785 10.08689122 10.09503749 9.12080059 1.30059234 10.51857930 10.64990282 11.55032767 1.88557436 10.12717011 8.00106134 0.30065091 4.58602610 7.28361532 10.90887647 8.21948462 8.40653029 15.31747341 10.35047017 8.79647673 7.22543401 2.30062162 14.85187926 9.18173568 12.90157983 12.10212791 9.64047163 9.81138577 5.32298809 9.36809629 0.0000000 0.0000000 0.0000000 -0.1074900 -0.1777400 0.0096714 0.0091705 -0.0065050 -0.0761450 -0.6969400 1.4181000 1.4181000 0.0441480 0.0176840 0.0154470 0.0154470 0.0154470 0.0294660 0.0294660 -0.5813700 -0.0565770 0.0034687 0.0465590 0.0465590 0.0449530 -0.2446000 -0.2453300 -0.0957800 0.0356230 0.0237060 0.0000000 -0.0060904 -0.1074900 0.0096714 0.0139110 0.0011070 -0.0120100 -0.0065050 -0.0761450 -0.0362650 0.0625080 0.0237060 -0.7116700 -0.0254550 -0.0254550 -0.0254550 -0.0184900 0.0176840 0.0176840 0.0154470 0.0154470 0.0294660 0.0294660 0.0294660 -0.5813700 -0.0565770 -0.0023179 -0.7186500 0.0465590 0.0465590 0.0327040 -0.2446000 -0.0957800 0.0354870 -0.0011087 -0.7171100 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.697 0.000 0.000 0.000 8.5149408 13.0007362 7.6756607 9.2893063 2.3812834 10.5167612 3.1079724 -0.6994662 9.8590423 7.3450157 1.3005923 6.1335122 3.2075181 10.1343023 9.3076489 2.4705369 5.8241823 7.4655289 10.3874212 13.5723035 9.0982021 6.0819808 9.4234496 0.3006509 10.5679935 9.9372462 7.3174298 NA 10.7100126 2.1079891 13.6713090 12.4615960 7.6089607 8.8986742 7.5580097 10.7682272 3.3006216 0.3006509 1.6225556 9.2239491 10.3153396 12.2230202 9.2165009 1.8855744 8.0529017 10.7804019 10.5039696 6.1335122 10.0745849 NA 9.2577237 NA 3.2075181 9.3234610 7.9776365 4.3880862 9.6426963 7.4503683 9.2402008 0.8855744 14.0369707 1.6225556 11.1366720 0.8855744 7.6756607 3.4705499 7.9153315 9.5064149 14.072505 6.207512 8.500294 13.090868 9.402597 11.060094 11.695084 10.308350 8.715497 9.587179 12.071492 9.827121 6.042088 9.971278 3.001064 7.195439 8.818291 9.739413 4.510076 8.177138 8.868578 7.465529 9.188314 6.490447 8.909800 10.985808 7.874269 2.300622 8.095037 6.163074 8.733163 9.975697 8.839780 11.732902 5.490445 4.001064 9.099903 10.517974 10.276470 9.570917 10.164034 6.133512 NA 9.966437 6.254817 5.388083 10.291435 6.081981 10.012289 7.558010 7.534241 14.282768 10.960172 9.396019 11.841234 10.426035 8.432478 2.107989 TCGA-AC-A5XU NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 3 NA NA 1 1 2 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 8.621532e-07 5.006051e-07 12.3692768 1.9590282 8.4201076 12.8080515 NA 8.6978054 NA 8.8182616 11.0957723 7.9201980 9.9009653 7.5707999 8.0821240 10.2481342 6.7663924 9.2655548 9.8139059 9.5693242 6.7139253 -1.3628999 10.2710128 10.2154820 13.7802534 11.5561589 8.9545220 10.8330967 6.3513545 10.1781769 0.2220626 0.6371001 7.4572881 11.3808919 13.3661459 7.4981966 12.3624756 12.7083203 8.9869433 7.6923916 5.6923909 6.5619218 9.1259538 6.2881610 8.9802950 13.0784325 -0.3628999 10.1274589 13.6412420 -0.3628999 10.0027756 9.7331655 7.0077965 7.4282722 1.6371001 14.7468721 8.7072304 0.6371001 8.7219177 -0.3628999 5.4950907 9.7728186 9.7566989 9.4396256 9.0985888 10.0680846 10.2895062 3.9225119 11.0398550 9.9635389 7.7919273 7.9567815 -1.3628999 10.3730884 14.9933722 8.9644038 11.0088860 10.3336423 7.4731594 -1.3628999 3.2220781 8.6815034 8.2444395 9.6828691 0.6371001 6.1209242 8.4810305 10.2439772 10.1498499 10.7482450 4.4444617 3.9225119 10.3161496 12.0938488 4.3095327 13.5483141 7.4315252 8.5574622 10.8953809 13.2749229 12.4920751 8.1108153 10.9514094 10.8796881 10.7153669 10.6859367 5.2518175 9.2351620 11.5426844 11.2580165 -1.3628999 10.2328330 8.2646434 1.2220626 4.7359824 8.9097392 11.9508427 10.2337650 8.7830414 14.5330632 10.3440370 8.2518194 7.2069645 3.8070354 14.7317644 5.0121485 11.0733004 10.4774939 10.8272427 9.6677765 8.4085989 10.1417992 -0.5249600 0.0543080 0.6413100 0.1681300 0.1579400 -0.0054654 0.2993900 0.3303600 0.3303600 3.6569000 0.0899260 3.6569000 -0.3503600 -0.4927200 -0.5255800 3.6569000 -0.5309800 0.3173100 0.2835000 0.0538800 0.0264490 0.3250300 -0.2302400 -0.2388100 -0.2388100 0.1953500 0.9305100 2.4437000 0.6541500 -0.5249600 -0.5249600 -0.0100800 0.2548800 -0.0054654 -0.0054654 0.2973200 -0.3072700 0.3303600 0.3303600 0.3303600 0.3137300 0.3473800 0.0741960 -0.5256800 -0.5256800 0.2339300 0.3062600 -0.5383000 -0.5770500 -0.5255800 -0.5398100 0.3173100 0.2968400 -0.3057400 0.2669500 0.0413900 -0.2722200 -0.2071500 -0.2340600 -0.2388100 0.1205700 -0.6084900 0.7441400 -0.0072618 -0.5152200 -0.2729000 -0.350 -0.350 -0.526 -0.526 0.284 0.284 0.267 0.000 -0.268 0.792 -0.207 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 -0.008 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 -0.350 -0.350 -0.526 -0.526 0.284 0.284 0.267 0.000 -0.268 0.792 -0.207 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 -0.008 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 8.1974423 13.2922487 6.5197526 10.0939771 2.8850276 11.6436108 2.2220626 -0.3628999 8.9488578 8.2295663 NA 7.5499987 0.6371001 9.9797397 9.5447512 2.5439907 6.9454485 8.8045276 8.1369552 10.5228057 9.3671804 8.1468843 11.8862228 0.2220626 9.3986605 10.2895062 3.1606782 NA 10.6974675 2.9590282 12.0644222 11.9626959 8.3392822 10.4428532 7.4668318 11.0337141 6.4763136 1.2220626 NA 9.4266430 9.8532489 10.3994913 9.0465003 1.6371001 10.5091032 7.3650302 10.4359862 5.6923909 10.2206622 -1.3628999 9.2908501 6.6815041 4.2518175 10.1558609 6.4639755 6.1993524 9.7265598 7.4825990 9.0379889 0.6371001 13.6260603 -0.3628999 10.8157742 NA 8.5529887 5.9680262 7.7403974 8.6787684 14.843643 5.012148 8.766392 12.362476 10.060225 10.524711 13.078433 13.006230 8.688318 10.592759 12.108658 12.269650 8.244439 8.246288 NA 7.112843 10.490809 11.635171 8.279161 8.545502 8.908572 8.428272 10.720486 5.875515 10.884740 11.556159 9.090380 3.160678 6.003431 6.688808 10.226761 9.921933 8.921355 9.379419 9.418469 7.195530 9.439626 10.620103 11.998642 10.242126 10.911779 8.212649 1.807025 8.929695 6.653917 7.298887 10.149850 7.421744 11.676885 10.316150 6.176269 13.717565 10.053379 9.896853 12.072649 10.346624 9.637814 2.096532 TCGA-D8-A73W NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 3 NA NA 1 4 3 5 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0549491 6.7970649 5.4966701 11.3523461 NA 11.0044647 -0.2582526 9.9285159 11.0027022 12.8440864 9.9003923 8.0455631 8.4966701 9.8058517 7.4560283 9.9663873 9.9675926 9.4586020 7.4560283 4.4966733 10.5511489 11.2643641 12.6565414 11.3765937 9.5402544 10.1617427 5.5872720 9.9457240 -0.2582526 1.9116916 8.4899756 12.3931707 13.1706007 7.8078720 12.5686290 12.9303715 10.8646106 5.8398135 3.4966669 6.0085698 8.4317805 11.1779736 5.6606463 12.8506337 -0.2582526 10.9920810 13.6077575 8.4866166 9.0679312 9.8858034 7.8476913 9.7620681 1.0637100 14.9925956 9.4525891 3.8292407 8.2276121 NA 5.4697037 9.8972333 10.4849340 9.1233255 10.9570123 9.1690955 10.3253356 1.0637100 11.5049950 10.4995893 6.2012143 8.8915298 11.8328874 9.5442989 15.2052272 8.2401931 10.7467053 11.3061703 7.6152265 0.7417474 NA 8.7375499 9.1146476 9.7724497 0.7417474 5.3564925 8.1575243 9.9687968 11.0668069 5.1168222 6.3564925 4.6725215 10.2584676 11.1958248 3.5491393 13.7308222 5.9991702 7.7613730 11.4295957 11.4737380 12.6850300 9.2555102 10.4013326 10.6868606 10.8998052 10.6602732 5.1847246 8.5555639 11.1756288 11.6038387 0.3267674 10.6040325 8.5475266 2.3267387 3.8743642 10.2017265 9.7916311 9.9627655 8.5264175 15.0309189 10.6140727 9.8568262 8.8305710 3.3267387 15.5236418 8.7571976 12.1658177 11.8299083 9.6358425 8.4300331 8.2012143 11.1257055 0.32253000 1.25850000 1.26480000 0.00180300 0.00180300 -0.00083160 0.00083195 -0.00083160 -0.70136000 -0.00332430 -0.00332430 -0.00332430 0.01098200 0.01098200 0.00000000 0.00000000 0.00000000 -0.00609740 -0.00609740 -0.00761010 0.00069327 0.01349200 -0.67361000 0.02188400 0.02188400 0.02328600 0.02328600 0.02328600 0.01349200 -0.66910000 -0.68122000 -0.00857660 0.00180300 -0.00083160 -0.00083160 0.00083195 -0.00326500 -0.70208000 -0.70136000 -0.70397000 0.01028500 0.00763920 -0.00332430 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 -0.00609740 -0.00609740 0.01782400 -0.00761010 0.00069327 0.01349200 -0.67683000 -0.67361000 0.02188400 0.00263570 0.02328600 0.02328600 0.01349200 0.00597000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1405261 13.2614189 3.6959827 9.8112324 3.4422269 10.2687709 2.0637100 NA 8.6501754 8.0271850 4.0637100 6.9824780 3.4966669 10.0015259 9.7481086 2.6486725 8.8953347 9.1795347 12.2715792 9.7592870 9.4925901 8.5345729 12.1646358 3.7417798 9.8626685 10.3253356 1.7417905 NA 11.0535310 3.0637100 12.6495183 11.6988846 6.8710662 10.7547563 10.5923601 8.9777968 2.3267387 4.2012104 0.7417474 2.2012261 8.4335262 10.0329534 9.8774920 4.2336350 9.3448618 8.7752056 9.8199335 7.9316074 9.2316306 NA 12.8283335 4.6244285 9.1102891 9.1686659 4.9646250 3.3267387 9.9487969 9.8483455 5.5746737 2.4422269 13.1735414 -1.2580801 10.3379724 NA 9.1426621 5.4142066 7.5587666 9.0455634 13.1355344 4.3564889 8.2175162 12.5686290 10.5730899 10.3491129 12.8506337 12.6853048 9.0700874 10.9229349 13.6123881 9.8626685 9.1146476 8.0905110 -0.2582526 6.5997641 11.7467053 10.9885232 6.0726997 8.3398353 8.5132720 7.8292451 9.1918908 7.2012143 7.4764919 11.3765937 7.5715054 2.7417905 8.5198599 6.7099316 11.9773481 10.4958349 8.1971100 8.7530098 11.6654815 5.2653431 9.1233255 10.7530099 10.4155334 10.4495731 10.6524254 9.3820276 -1.2580801 9.7450897 6.5555631 3.8292407 11.0668069 6.9167083 10.7669222 10.2584676 7.5683309 12.4695967 9.3973133 10.6225140 13.5497915 9.9512360 10.3725048 0.7417474 TCGA-OL-A97C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 NA NA NA 1 2 1 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.4082014 5.9091611 6.9569906 11.6136484 -0.5666132 9.8565443 -0.5666132 9.7688187 11.9417183 9.6860937 9.9121979 7.1816214 9.3433214 8.7732784 7.4613346 8.4585678 10.0499772 9.9657843 8.3160715 4.0772857 11.7013854 10.4064082 13.5455420 10.6428817 9.8533885 10.4369462 5.2407837 10.3122456 6.4221136 -0.5666132 9.2694788 12.0936472 12.8702700 6.5208905 12.3746594 11.4561429 11.8260141 6.9252815 3.2407875 8.2082153 8.4390529 8.2757786 8.1373319 11.4630607 2.2407723 11.4171346 12.5169077 6.8512806 9.3802615 9.1407876 8.7165167 3.6813593 -0.5666132 14.7584425 8.6501743 4.1883139 10.0969864 1.4334402 4.9880166 9.6919944 9.6183036 9.6777922 11.1124686 9.6207805 10.1545275 1.7553576 11.7031395 11.4512807 5.8763721 7.6133372 1.0184205 10.3145423 14.6887152 8.8971981 11.0632403 11.1545276 9.0880645 3.1338758 0.4333868 9.4981711 9.3759428 11.4924348 0.4333868 5.2663181 6.9412225 10.8846394 10.8748164 10.0709589 5.0481403 4.8257449 9.6501741 11.8607412 2.2407723 13.2982916 5.5831761 7.6379992 12.7222944 11.6117820 12.8651871 8.6860939 10.4785054 10.9696756 10.4821741 10.5983352 5.0183894 8.7440410 11.2098614 12.1399244 -0.5666132 10.5334336 8.3403188 1.4334402 6.9655119 9.5062308 10.4334283 9.9937612 9.3963243 15.6631860 10.5008627 8.6033534 7.6860936 8.4995175 14.8922515 8.9030702 14.9804434 12.1583685 10.2999346 10.0342705 7.5882462 9.7967747 0.0026881 0.7147800 0.6716200 0.0039378 0.0000000 -0.0025800 0.7172300 -0.0094286 -0.0063405 -0.0043790 -0.0043790 -0.0043790 0.0011617 0.0011617 -0.0079722 -0.0079722 -0.0079722 -0.0064528 -0.0064528 -0.0114210 0.7130900 0.0046325 -0.0140380 -0.0140380 -0.0140380 0.6133000 0.6574400 0.6149600 1.4165000 -0.7550900 0.0026881 0.0071351 0.0000000 -0.0025800 -0.0153190 0.7172300 -0.0137820 -0.0094286 -0.0063405 -0.0038256 0.8843300 0.8763500 -0.0043790 0.0058834 -1.2929000 -0.0042407 -0.0049322 0.0011617 0.0011617 -0.0196720 -0.0079722 -0.0064528 -0.0064528 -0.0064528 -0.0114210 0.7130900 -0.7415600 0.0053273 -0.0140380 -0.0140380 0.1032800 0.6133000 0.6422900 0.7087700 -0.0114120 0.0138240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.642 0.642 0.715 0.715 0.689 0.689 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.642 0.642 0.715 0.715 0.689 0.689 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 7.9132084 15.5024585 8.5393368 11.6528994 3.0183849 10.3014792 1.0184205 NA 9.3433214 7.7372088 -0.5666132 8.2631509 1.0184205 9.5920380 9.8887556 6.6622468 11.0103850 10.5189009 11.8672746 9.8617885 9.2189136 7.8428192 11.5876136 3.7553576 8.7165167 10.1545275 7.8128069 -0.5666132 10.9555194 7.3934299 13.3448203 12.4702888 5.6622482 9.8565443 8.4914202 10.1604980 6.0032829 0.4333868 1.4334402 5.2914083 9.2929632 9.9402318 8.7188305 7.0333415 9.1182647 6.8512806 10.1260439 4.7909805 9.7222944 NA 12.3076413 6.2914102 3.6033593 9.7048213 6.7655997 2.8928573 9.1005399 12.2561983 5.2914083 -0.5666132 13.9240912 -0.5666132 11.1299612 -0.5666132 9.3685933 7.6766024 7.1613486 9.7222944 12.634442 7.588246 8.126916 12.374659 10.388352 10.273419 11.463061 11.050896 9.077285 10.530144 13.534830 10.227032 9.375943 8.968704 2.603359 6.884639 11.167291 11.9287838 6.9491287 8.2914092 8.4221131 7.6331006 10.3569490 7.3282459 4.7553576 10.6428817 5.4557974 5.1338676 9.7222944 8.4353152 13.7333518 10.7019704 9.2867379 8.9783927 11.2627547 5.4995175 9.6777922 10.3091777 10.3927058 10.3335405 10.2440000 8.9956708 NA 9.6217698 9.9671669 5.3403201 10.8748164 8.8928600 10.6652496 9.6501741 7.0554798 14.3639347 9.7165167 10.2929631 12.8288286 11.9432034 9.8732592 -0.5666132 TCGA-C8-A8HP NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 2 6 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.7580010 6.2354514 8.4561807 11.1907729 0.8662354 8.8643375 NA 8.5527179 11.0357248 9.5562152 10.1322230 7.4105378 7.7365819 9.6099298 6.9033071 9.5631848 9.9563297 10.4163227 6.8662169 7.1941442 11.8123925 10.5689672 14.1983937 10.3222295 8.9160658 10.8950443 8.1546991 9.8605707 -0.7188062 1.2812531 8.4259128 11.1431172 12.3131283 7.0294474 17.5226096 12.2502815 10.6088075 4.2354514 NA 7.7406861 8.0057688 5.3473432 6.0886102 11.9816945 NA 10.4648902 11.8480224 7.1204587 10.0615895 10.5683900 8.5028417 9.0982385 5.4710801 14.7317695 13.1278412 NA 7.1392362 NA 6.7406861 9.2628221 9.8067756 9.0074730 9.9403588 9.3077782 9.8339239 2.2812531 10.3904325 10.7539456 6.5850361 6.9251105 12.1751251 7.9069639 14.4976218 6.3343663 9.6874598 9.3753325 8.8941232 3.1881477 3.6735677 8.0494391 7.6863962 10.1054180 NA 3.8048177 7.7650706 9.1392359 9.9860230 6.7569886 7.6076847 6.4001963 10.0260886 11.0861925 4.7406848 13.1627512 5.2354514 6.3473432 10.9496967 14.0265089 12.7285964 8.2060673 10.6244405 10.6821342 9.7989242 10.1438922 3.0886165 10.0151176 11.5669460 10.0277692 2.7406901 10.3871633 8.0091753 2.7406901 4.2451914 9.0411430 8.5527179 9.4271869 8.2470393 15.0879806 9.8737119 8.7590130 8.9519109 2.4511715 13.4367055 8.7324659 12.7981859 11.7327235 8.9782222 9.6132913 7.0023537 9.8202972 -0.0435000 -0.0435000 0.1890400 -0.1628100 0.1231700 -0.1570700 0.0272160 -0.0113350 0.4159700 0.1293300 -0.0590210 0.0698390 0.0950110 1.8912000 -0.1178300 -0.1178300 -0.1178300 0.0544210 0.0544210 0.0000000 -0.1619200 -0.1874800 -0.1872200 3.6569000 0.1640000 -0.1928700 0.0029133 0.0857990 1.6655000 -0.0435000 -0.0435000 0.1096800 -0.1628100 -0.0392580 -0.1635800 0.0272160 0.0272160 -0.0113350 -0.0113350 -0.1775200 0.0898510 0.0898510 -0.3256500 -0.1733500 -0.1733500 0.2925100 0.2925100 -0.1733500 -0.1733500 -0.0363410 -0.1178300 0.0544210 0.1068700 0.1068700 0.0000000 -0.1809300 0.8518500 0.3112900 -0.1872200 -0.1840700 0.0910100 -0.1455400 -0.1924900 -0.0602110 -0.2667300 -0.1840800 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.164 -0.164 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.119 0.293 0.000 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.164 -0.164 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.119 0.293 0.000 9.1821217 12.8305582 5.3897802 9.1546989 6.2526825 12.0829632 4.3256455 3.4511847 9.2994551 8.8028553 0.2813125 7.0434047 3.0886165 10.9309601 9.0176567 3.7406901 8.5781711 8.3091607 9.8377608 10.0853859 9.6172480 7.3580701 11.7743597 1.8662354 6.8811678 9.8339239 7.6388066 NA 11.6473038 -0.7188062 12.1326134 12.6952793 7.6388066 9.2741932 9.1971341 12.7388922 4.2354514 3.0886165 -0.7188062 4.6735734 8.4182460 10.0151176 9.6660386 5.2585340 9.7572922 10.3098516 9.8978037 5.9536796 8.6842668 0.8662354 9.0159644 2.2812531 5.0886081 9.2925660 7.5143953 8.4882692 9.7969546 9.0853859 11.2945775 3.6735677 13.6160867 -0.7188062 11.5941378 NA 8.5503816 4.5291838 7.5758758 9.2281612 10.808527 8.618877 9.029448 17.522610 10.320983 11.366063 11.981695 9.524429 8.578171 10.055218 12.507065 8.151619 7.686396 8.418246 2.981688 7.336537 11.991846 11.936115 4.866216 8.828149 9.436073 8.194144 11.645006 8.029448 10.076483 10.322229 7.707519 NA 9.991200 9.457989 10.223036 11.210513 6.325649 10.313989 6.946591 8.835844 9.007473 10.160838 10.277728 10.671961 11.411825 7.603183 3.281253 9.866386 8.853121 9.438602 9.986023 6.441127 11.755468 10.026089 7.420806 13.253963 10.502238 9.966880 11.746311 11.434490 10.197134 3.451185 TCGA-BH-A5J0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 NA NA NA 1 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.307136e-06 2.781139e-07 11.4608724 6.3081570 6.9401538 11.4472901 -0.1096701 8.4487259 NA 8.7216122 10.7357952 9.6667381 9.0501765 6.4138665 8.4883575 9.6011115 5.8789901 8.7436146 10.1287098 9.6139660 6.9830620 6.9455878 10.9526886 10.8184533 12.9595871 11.1794595 8.6568342 10.1739723 8.1167172 8.9333324 -1.1096701 NA 8.2718482 9.8718724 12.3253242 7.5803030 12.1830581 12.7955041 10.8232580 5.0801289 -0.1096701 7.2122327 7.7420541 10.3202349 7.5627301 12.4085895 NA 12.0055114 13.3671779 6.7790482 10.3664286 10.1646833 5.9563936 6.7911720 NA 15.7742545 13.4387658 -0.1096701 8.9883373 NA 4.5050144 9.0526966 9.6410122 8.8357488 10.2555340 9.1986442 10.1316925 1.8902910 9.7529426 9.8973324 7.2301550 7.7040862 7.5768055 10.0652309 14.6996713 6.5116246 9.6782077 9.1606006 8.1757072 3.3497333 5.3332484 7.9292241 7.7451735 10.2451054 -1.1096701 5.9671202 7.9428734 8.9935929 10.6079816 6.3332484 6.0092464 5.7482868 8.9537003 11.7815192 3.4138648 13.3917692 5.7104841 6.3332484 11.5128146 13.2141340 11.9069393 8.7866375 10.2609925 10.1382326 9.3670512 10.0627326 2.4752665 10.0997585 11.9069393 10.9098959 2.0602204 10.5807397 8.2826224 0.4752925 1.4752925 8.4040328 10.3786474 8.6267071 8.4733880 15.1657386 9.3640110 8.5732995 7.9883370 3.2122269 15.4465118 8.8225198 12.9371733 11.7106836 9.0602301 9.9968680 6.6912047 10.2620926 -0.110770 0.476670 0.664010 1.742500 0.428220 0.221490 0.055943 -0.522460 0.331410 3.656900 -0.144380 0.251190 0.070530 0.070530 -0.061152 -0.061152 -0.061152 0.109640 0.109640 -0.096044 0.281840 0.304090 -0.479700 -0.479700 -0.479700 -0.115040 -0.115040 -0.174740 0.304250 -0.110770 -0.110770 -0.094196 -0.528490 1.385300 -0.231530 0.055943 0.055943 -0.529400 -0.145150 0.331410 0.203200 -0.111820 -0.897480 0.035242 0.035242 0.035242 -0.104470 0.070530 0.369860 -0.376280 -0.418570 0.109640 0.109640 -0.106690 -0.518870 0.127400 0.234950 -0.520330 -0.479700 -0.479700 -0.529530 -0.072942 -0.115040 0.304250 -0.768000 -0.498920 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.127 0.304 0.480 0.000 -0.480 -0.480 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.127 0.304 0.480 0.000 -0.480 -0.480 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 9.5916115 14.0394965 4.4138648 10.3123699 3.0602377 11.1082628 2.5907457 -1.1096701 8.6028321 8.3861600 -1.1096701 7.1476934 3.4752665 10.3841606 9.5040946 2.8903105 8.0702143 8.3761345 8.5959374 11.9411741 10.9252141 6.2031874 11.2492310 2.0602204 5.4294653 10.1316925 6.1570922 NA 10.7389281 4.2478592 12.6482160 12.5213685 8.0451235 9.4780826 10.1064446 10.0819813 2.9777745 2.8903105 -0.1096701 5.2122347 9.3197119 11.2462068 10.3492244 4.8903056 8.7903566 8.2189802 9.9590834 4.0195863 9.3831597 NA 9.5377635 2.2122269 4.0195863 9.3830495 6.7347909 3.6976626 10.1877946 8.6267071 7.9804178 -0.1096701 13.6991185 0.8903299 11.1328838 NA 6.7544907 4.0602290 7.6847213 9.4799562 12.801868 5.901533 8.351785 12.183058 10.189513 11.005674 12.408589 11.774285 8.992976 9.827679 12.547512 9.723986 7.745173 9.440090 5.175708 6.576806 9.918211 10.641012 5.333248 8.888895 8.347686 7.019589 9.779155 8.343576 9.234601 11.179459 8.606267 2.349733 5.265343 7.023498 9.278322 10.107051 7.417782 9.683909 5.576806 5.671664 8.835749 10.704888 10.622048 9.586403 10.012486 6.382159 NA 9.677816 7.123925 5.194087 10.607982 6.562731 10.789662 8.953700 7.203188 13.688828 10.987020 10.417782 11.712478 10.894877 8.668382 1.890291 TCGA-HN-A2NL NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4 1 NA NA 2 5 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.769205e-06 4.509738e-07 12.620806 2.905697 7.136269 10.849016 NA 10.387318 -1.553850 8.341089 11.803685 7.474177 9.741466 8.413497 9.060981 8.806020 9.032172 6.958024 6.961971 10.381804 9.171637 6.565212 11.258448 8.506967 10.997739 11.493395 10.745193 10.261654 7.335014 10.780824 8.786121 2.146720 7.578128 10.323171 13.782464 8.051751 9.329678 11.352974 9.339572 9.002777 6.160517 8.811500 7.983489 12.256340 8.565212 7.536383 NA 9.749481 6.180981 6.160517 10.961340 10.112939 7.880899 3.533738 1.031254 14.752226 11.319375 2.616193 6.328914 -1.553850 4.713058 9.537045 9.270434 9.345628 8.654505 9.778867 9.227631 4.889216 10.115599 11.112273 6.631146 6.046183 1.768206 11.952454 13.348316 8.232655 11.124651 10.153198 10.843946 1.616217 NA 9.974725 8.079266 10.658463 NA 4.304255 7.042460 11.406273 9.990752 7.191105 5.703660 4.905702 9.470718 12.637407 NA 12.664229 5.554794 7.874631 11.702332 10.202410 12.226913 6.146710 11.157508 10.306582 10.593272 11.148011 4.768200 10.061441 11.590292 9.946615 -1.553850 10.307358 9.693605 2.253626 8.124220 9.023700 8.972770 11.408986 8.652064 14.245451 11.892708 8.746623 8.829975 NA 11.398648 3.575554 12.347421 10.883503 10.818320 10.780544 7.423550 10.105678 0.17513 0.19695 0.20870 -0.61614 0.20549 -0.59828 -0.66864 0.21407 0.27237 0.15293 0.15293 0.12800 -0.56939 -0.43366 0.21960 0.21960 0.21960 1.02620 0.16685 0.93961 -0.59234 -0.61992 0.18950 -0.61786 0.88356 0.16911 0.16911 -0.64640 0.20152 0.17513 0.18968 -0.54724 -0.61614 0.21484 -0.59146 -0.60757 -0.60167 0.21407 0.27237 -0.54340 0.16400 0.19266 0.82118 -0.60738 -0.60738 0.26388 -0.65193 -0.43366 -0.27703 0.21960 0.00000 0.24575 0.16685 0.75754 -1.29290 -0.60583 -0.60535 -0.65845 0.18950 -0.61786 -0.61475 0.16911 -0.64640 -0.65062 -0.61422 -0.64537 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 8.41925066 12.32317146 2.14672038 10.20699089 4.55395638 12.70763127 3.93812580 0.44625623 10.63207550 9.31586462 4.00085635 9.39828409 10.00181871 10.21155702 9.79333848 5.62617919 7.13626933 9.84126933 8.71890065 10.84928288 9.95120908 6.44062503 10.05452577 1.03125403 9.35616406 9.22763062 1.03125403 NA 9.69893624 9.28783518 14.17597128 12.72101301 6.38878537 9.80547143 11.11116254 9.76255246 5.93812344 2.44628270 0.44625623 4.71305790 9.76085415 10.44168473 7.30425183 9.96394021 5.76783751 7.71305721 10.87174910 5.17419067 11.56731865 -1.55384966 11.11404773 2.35315388 7.28547435 10.37946360 7.10615985 6.68467569 8.11869611 8.22926922 9.24636177 3.87253330 14.87453290 0.03125403 11.18457432 2.69418932 9.89387076 7.28862157 8.37848561 7.99701742 7.586998 9.275994 7.855662 9.329678 11.142178 11.262054 7.536383 11.092154 10.166601 11.655724 12.135286 12.541173 8.079266 8.931094 7.046183 9.131896 10.401558 10.070609 5.479693 8.197815 11.294307 9.149309 9.328257 6.965907 5.423551 11.493395 10.209068 4.838589 10.825108 9.724139 12.314418 10.877507 8.363643 10.624002 5.930087 7.240686 9.345628 9.947113 6.167370 11.088323 10.384748 7.650842 -1.553850 9.327943 5.969832 7.915913 9.990752 7.653285 10.636095 9.470718 7.406794 15.492116 10.960492 11.272819 11.759863 12.552588 9.115156 3.400470 TCGA-WT-AB41 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 5 NA NA NA 1 3 2 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.8862640 5.7018401 4.7867270 10.9686259 NA 8.7422535 NA 7.3298708 9.1868759 11.3823854 9.4518612 6.2120343 8.7181410 9.0878977 8.1003885 8.8595690 7.7969968 9.6058125 6.3578845 4.9428476 10.4106620 11.8438690 13.7722450 11.8653747 8.2196879 10.0303103 8.9657843 9.9370558 -0.3426344 1.6574571 7.4453476 9.6811996 11.6644725 6.3298699 12.6775571 12.1410091 9.5792861 4.3013023 NA 7.5091946 7.4388052 7.0668362 6.0837091 11.5142598 NA 12.3613488 14.2162247 0.6574571 10.5298508 9.2739942 7.9101108 6.0837091 -0.3426344 16.5912166 10.6080012 0.6574571 8.1691980 NA 4.1168804 7.9101108 9.0171948 8.2273007 9.2101144 8.4453476 10.2291979 2.8273719 9.3870661 9.8398396 5.8862648 7.9972952 3.1168804 11.2168224 13.5586893 -0.3426344 8.2758307 8.7554775 8.7944363 1.9793669 8.0368236 7.0411499 7.1492980 8.4022792 -0.3426344 4.4647989 6.9520656 10.3921549 10.0593914 4.7867270 5.8862648 4.4123344 8.5431417 11.7083142 6.7969961 13.7967568 6.1331792 6.2868017 10.5499881 12.4736289 11.8116305 9.4404436 11.1173891 10.3870660 10.5347294 9.1003888 1.2423891 10.2263514 11.6560357 11.7445766 NA 10.1790457 8.0017409 NA 2.2424196 8.5911360 10.9771174 9.0962371 8.2684700 15.5518367 10.5658379 8.4871680 6.4256288 7.5091946 14.2061468 7.2721548 11.8103638 11.4855817 10.0006309 9.2831541 5.9612251 10.2140088 -0.50194000 0.93874000 0.93874000 0.01042400 0.51141000 -0.02972100 0.50116000 0.00833510 0.00833510 3.65690000 3.35580000 -0.00290910 0.01457300 0.01415800 0.00597000 1.04340000 0.98721000 0.01824300 0.00402710 -0.00221680 -0.51424000 -0.52430000 -0.49944000 0.02272500 0.02028400 0.50122000 0.00583090 -0.45544000 0.01399900 -0.50330000 -0.50194000 -0.00173770 0.00624810 -0.47173000 -0.45105000 -0.51784000 -0.51784000 0.00833510 0.00833510 0.00833510 -0.00090348 0.00000000 -0.52981000 0.00903120 0.00903120 0.00903120 0.00903120 0.01415800 0.01415800 0.00597000 -0.52082000 0.01824300 0.00903120 0.00903120 -0.00221680 -0.52100000 0.93732000 0.01838300 -0.51846000 0.02272500 0.00332990 -0.52971000 -0.45544000 0.04287400 -0.02932200 0.02932500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 9.9089277 12.0451934 5.2424082 9.1533002 5.1810071 11.5940832 6.9053726 NA 9.9300751 7.5522633 2.6574342 6.3989130 5.0149979 9.9451576 9.9405335 2.4647989 10.0899872 8.3263302 8.8248633 11.3870660 8.6261120 5.0837112 9.6447093 -0.3426344 8.2386460 10.2291979 3.9053702 1.6574571 10.7783311 5.7867270 13.5319464 11.9925564 7.2573577 10.0116947 10.4784220 10.8534325 1.6574571 7.5461884 NA 3.7449038 10.4672133 11.9526402 9.8790324 3.9793760 8.2174343 9.1452854 9.7329245 4.7867270 10.3369254 NA 10.7705362 NA 2.6574342 9.9975959 7.5497754 7.8173169 10.1076255 9.0837101 10.5301201 -0.3426344 14.6711605 NA 12.0774054 NA 6.4388052 4.3013023 8.6991043 9.8898662 14.8108334 5.9972947 7.8373542 12.6775571 10.5254961 11.2447540 11.5142598 9.8046502 9.7594209 9.9725949 12.7685809 10.7521828 7.1492980 9.6361557 -0.3426344 7.6461302 9.1652399 9.843559 4.464799 7.895850 8.092074 7.392155 8.905942 8.623230 8.062587 11.865375 7.108656 1.979367 9.540088 8.560152 7.956653 10.403120 8.343946 10.586704 4.412334 7.771188 8.227301 10.491126 10.176098 8.677036 10.248968 4.866898 1.657457 9.796139 6.133179 8.898236 10.059391 4.242404 10.718816 8.543142 7.552263 14.111809 10.102460 9.171173 12.306926 10.108656 9.844797 2.979367 TCGA-PE-A5DC NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1 NA NA NA 1 1 2 3 3 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.113666e-06 7.78719e-07 10.9929291 6.6563419 6.6927145 11.1629891 -1.2202780 9.6142959 -1.2202780 9.4353556 10.7910521 9.5153809 10.0818926 6.6867148 8.9116817 10.3487310 6.6440105 9.3151002 9.6362503 9.4173555 6.8883487 3.7798270 11.4180345 10.3876175 13.6323544 11.5576966 8.7441658 10.3506293 5.7685099 10.3228566 -1.2202780 0.7798060 6.9989931 10.9995984 13.1450537 5.6986880 13.0380228 13.0077416 9.6432368 6.0466111 1.1017845 6.7513686 8.1656874 6.2392567 6.8619740 12.6963575 4.8883487 10.6443979 13.9378033 5.0836048 9.4965930 11.0486592 5.9497497 7.7628185 1.9497590 13.7562650 11.0178563 0.3647965 7.7340213 -0.2201100 4.4236790 9.3676024 9.4776611 8.7826399 9.7727632 8.8619740 9.8084216 3.5871849 10.6432368 10.8153113 7.4091813 7.2716778 5.9989943 9.3315330 14.4180062 7.2570163 11.2227683 10.4615025 8.5546119 1.1017845 7.2474301 7.2756794 7.7798251 10.9209740 -0.2201100 6.3420676 7.5446963 9.3769463 10.0972375 3.4802651 4.1373806 4.0652276 9.7987205 12.0450003 6.2310368 12.8639689 5.8987670 7.5936063 11.8624729 13.3500363 12.5111439 7.6253151 10.3487310 10.0887326 9.7142529 10.3392020 3.5347091 9.3797377 11.1428645 12.4294179 -1.2202780 10.2801689 8.7656667 -0.2201100 3.7834252 8.1218997 10.5697660 10.0807493 9.2186168 15.3214055 10.4793973 9.2238043 9.4897703 1.5871729 14.2150067 7.6095474 11.8935670 11.9581785 9.8599762 9.4715683 7.6190285 9.5833910 0.0000000 0.0000000 -0.0370820 0.7068200 -0.0008316 -0.0059522 0.1224100 0.6728900 -0.6849700 0.0048579 0.0048579 1.1589000 0.0022193 0.0153080 -0.0769450 2.8855000 0.8956800 0.0526680 -0.0076101 0.0332670 0.6823500 0.5856000 -0.5863700 0.0573680 0.0573680 -0.0062286 -0.0062286 0.1584600 0.6957700 -0.6620700 0.0000000 -0.5832400 -0.6721400 -0.6741700 0.0020805 0.1224100 -0.0048268 0.6728900 -0.6849700 -0.6849700 0.6980200 0.0297470 -0.6834500 -0.6643000 -1.2929000 0.0353830 0.0175120 0.0153080 0.0181030 -0.3877200 -0.6758200 0.0115390 -0.0076101 0.0238470 -0.6639300 0.0132130 0.0235660 -0.6873600 -0.6762800 0.0573680 -0.6648500 -0.0062286 -0.6465000 0.0094491 0.0072217 -0.6701200 0.000 0.000 0.000 -0.599 0.000 0.000 0.000 -0.678 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 0.000 0.000 0.000 -0.599 0.000 0.000 0.000 -0.678 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 8.414636 12.507745 6.989279 9.826267 1.511013 11.464135 2.101751 1.101785 9.067537 7.065227 NA 7.941259 3.779827 10.543037 9.777004 7.180704 7.880487 9.452250 9.147240 10.571802 8.615417 7.704638 11.732384 0.779806 8.176429 9.808422 3.239261 1.949759 10.877199 4.587179 12.414976 11.911843 7.909108 9.206090 10.096106 9.097238 6.438037 3.587185 0.779806 6.154865 9.522134 10.034263 10.266157 5.206088 9.621861 9.663995 9.731110 5.137376 9.368539 NA 10.148877 0.779806 5.650190 9.053888 6.109666 1.949759 9.897468 7.473312 6.802193 2.101751 14.011758 1.101785 10.682577 -0.220110 6.644011 6.172141 8.243349 6.295525 14.899613 7.322857 8.761392 13.038023 10.538048 10.445161 12.696357 13.008644 9.697197 9.676914 12.441269 10.973350 7.779825 7.893567 2.239245 7.824219 11.453355 11.264144 4.452253 8.767089 10.111861 8.818744 10.438063 5.898767 6.423681 11.557697 6.394535 NA 6.580724 7.746042 9.692714 9.312181 6.680691 9.529694 9.231036 4.206088 8.782640 10.128553 9.680692 9.949750 10.843557 7.494071 0.779806 8.746777 6.041543 3.423686 10.097237 4.710564 11.217837 9.798720 6.705291 14.114447 10.000203 9.643237 11.873242 10.978884 9.327683 -1.220278 TCGA-PE-A5DD NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 NA NA NA 1 3 2 3 3 2 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 9.733988e-07 3.893595e-07 10.722264327 7.008177599 7.691809111 11.668869122 1.313303907 8.926534694 NA 9.042578679 11.412908623 10.114844469 10.281964559 7.942654663 8.792269724 9.597774918 7.467103372 8.978633818 10.841947260 9.102505393 7.161295169 0.576377015 11.697865715 10.285415975 9.273299777 10.894498350 9.297431494 10.245807829 7.340097555 10.037129322 2.313303907 0.576377015 7.957153711 10.776822195 12.487599322 7.463045303 12.111445536 13.361648421 9.869420648 7.308782238 3.945570250 7.052065873 7.957153711 10.534884902 7.262832452 12.980143131 1.798714147 11.423128467 14.502813522 7.919147575 9.746106984 10.445154762 8.423911747 5.836860815 -1.008682243 14.768849774 11.358104455 -1.008682243 8.839992645 NA 6.002596767 9.498173065 9.580084416 8.846238177 10.850127831 9.971509211 10.066180164 5.383687015 10.817520935 10.877828359 7.684856599 7.843118947 NA 11.492211572 14.806277550 9.157947133 10.346720815 9.963631477 8.333444308 2.691802133 4.035764654 7.827420196 8.473169154 10.852068694 1.313303907 6.867886582 7.904258885 9.094657551 10.394381769 5.450802153 5.691810506 4.576334684 9.078832624 12.057795301 1.798714147 13.464441207 6.229774400 7.846238177 11.440002252 12.108688123 12.426909734 9.362057124 10.543077943 9.951371566 9.396851559 11.018930176 4.078831823 9.291722341 10.798724595 10.442065486 -1.008682243 10.516401011 8.686597871 -0.008682243 5.037074672 9.109012852 10.652256933 9.416585593 8.712468879 14.939782556 9.622546791 8.355504388 10.045295522 2.991372184 14.943473889 8.385832209 13.255738984 12.042408672 9.869420648 10.568326396 8.499164232 10.411450927 -0.7698800 0.0291840 0.8048000 0.0828410 0.5366100 0.0000000 0.0189910 0.0127950 -0.0204570 -0.1570700 -0.1570700 -0.1570700 -0.0475840 0.0554260 0.0197830 0.0197830 0.0197830 -0.0127850 -0.0127850 -0.7691100 0.0300290 -0.7545200 -0.7341400 -0.7341400 -0.7117600 0.0817550 0.0817550 0.0817550 0.0777180 -0.1794200 -0.7698800 -0.0802750 0.0828410 0.0000000 -0.7842000 0.0189910 0.0189910 0.0127950 -0.0204570 0.0063871 0.0169850 -0.0098185 -0.1570700 0.0209030 0.0209030 0.0209030 0.0209030 0.0554260 0.0994330 0.0197830 -0.7836100 -0.0127850 -0.0127850 0.0442900 -0.7691100 0.0300290 -0.7495000 -0.7540000 -0.7341400 -0.7117600 -0.7648400 -0.7299400 0.0817550 0.0513870 0.0244080 -0.7339800 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 9.260496422 13.029345555 3.239291103 11.180267543 2.706154773 11.865006057 1.798714147 NA 8.942654370 8.370747990 0.576377015 7.826472855 2.691802133 9.766980032 9.983599892 2.313303907 8.674364251 9.357691869 10.930214118 10.015124114 9.772524405 8.215371370 12.109337410 1.576328637 8.744586305 10.066180164 4.200826039 NA 10.605619429 3.746259014 12.158787837 11.307651254 8.440518311 9.882393918 8.364234918 9.998396929 5.258157075 1.798714147 -0.008682243 2.576328637 9.229774400 10.772319523 10.593140474 5.576331661 7.824481475 8.024792831 9.544038841 5.591281472 8.785785598 NA 11.244626303 2.576328637 4.798724514 9.970644895 6.099370956 5.348922861 9.906502218 9.054764654 8.522750996 1.991354042 13.815881008 0.576377015 10.437936064 NA 7.344516956 7.084126999 7.161295169 8.022037065 12.573105 5.898259 8.227384 12.111446 9.949922 10.410803 12.980143 10.872484 9.316675 10.157533 12.747718 10.094002 8.473169 9.073519 2.161307 6.576332 10.601010 11.418944458 6.705615801 8.146187810 9.253464606 7.366408773 11.078766257 7.557423876 9.504110076 10.894498350 7.925060056 -0.008682243 5.649580972 7.920805395 10.238110318 10.558375078 7.035763554 9.572570255 10.381538625 5.576331661 8.846238177 10.646453137 11.259619288 11.001198320 11.075513712 7.670849540 3.945570250 9.558622370 7.212811519 6.191041443 10.394381769 6.295149946 11.256949605 9.078832624 6.719290242 13.159436130 9.398637463 9.723537060 11.969186221 11.056449204 9.891481769 1.313303907 TCGA-D8-A73U NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 1 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1150724 6.3753505 6.9259626 11.2248209 2.4253787 10.1662460 -1.0341603 9.4767245 11.3155181 10.7275117 9.4677975 8.2374237 8.5953172 9.8301466 7.3625654 10.0374227 9.7216826 10.0705592 8.7191773 4.2138916 11.0626756 10.3588145 8.8004314 11.4021514 9.5022077 10.4233413 9.6879140 10.1772404 -0.0340126 1.2878860 9.8254952 11.6832084 12.2680281 7.7141535 11.8874295 12.0902433 9.8098815 6.4335654 3.4253922 7.0849019 8.8981751 9.1827062 8.2765730 12.5019647 3.3582837 11.4525441 12.6377226 6.8114505 9.6363422 9.4578134 7.5396078 5.2513631 NA 15.8815577 13.1043834 3.1358796 9.0103547 NA 6.4973425 10.1067902 10.5443331 9.6577040 10.9680722 10.0387629 10.4563100 5.9084743 11.4462457 10.8687124 6.4005892 9.0360813 6.0212421 10.3948440 15.1986062 8.7089604 10.7320751 10.1346326 9.8773524 3.7208475 2.2878860 9.6844934 8.5695868 11.9853774 -1.0341603 6.7733159 7.6170119 9.7300027 10.7312465 6.7473203 8.7440376 7.2043648 10.1662460 11.6960059 3.7208475 14.1478503 4.9201551 7.5089919 12.2762892 13.0904856 12.9798937 8.4578134 10.3091462 10.4527955 10.3114821 11.1016697 5.3058101 8.6524610 11.5795197 10.1087057 -0.0340126 10.6232789 8.5031790 3.4253922 4.6129894 10.1296100 10.2420848 10.2156665 8.5147823 15.2415393 10.0738313 9.5612179 8.9757889 8.2067516 15.1160051 9.7489586 13.0873320 12.1639449 9.9952476 9.4914812 8.2878887 10.9794122 -0.19950000 0.39579000 0.39579000 0.00694350 0.00174280 -0.20796000 0.00652620 0.00555290 0.00555290 -0.10959000 -0.10959000 -0.10959000 -0.07841100 0.00305220 -0.00373950 -0.00373950 -0.00373950 0.00000000 0.00000000 0.00711190 0.00277450 -0.20025000 -0.19725000 -0.19725000 -0.08173800 0.00638710 0.00638710 0.00638710 0.44511000 -0.19950000 -0.19950000 -0.00027724 0.00694350 -0.20796000 -0.20796000 0.00652620 0.00652620 0.00555290 0.00555290 0.00555290 0.01419000 0.01419000 -0.10959000 0.00499690 0.00499690 0.00499690 0.00499690 0.00305220 0.00305220 -0.00373950 -0.00515830 0.00000000 0.00000000 0.00000000 0.00180300 0.00277450 -0.20025000 -0.19462000 -0.19725000 -0.08173800 -0.20858000 0.00638710 0.00638710 0.40627000 0.00264730 -0.00705760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.198 -0.198 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.198 -0.198 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 11.0327223 13.3793900 2.9659689 10.5002633 6.2918503 10.5602850 4.7208475 NA 9.0089877 8.1656326 -0.0340126 7.6767667 3.9659597 9.7489586 9.7571233 2.4253787 9.3922251 8.5414997 10.2304030 9.0185285 9.2880464 8.5769854 10.3426285 4.6938828 7.1802792 10.4563100 1.9659505 NA 11.4578135 2.9659689 12.8649396 11.9051723 8.1899619 10.0041935 9.7684768 8.9993833 4.3922281 4.4895237 -0.0340126 1.2878860 8.5788289 10.0639925 10.1277221 3.8728485 8.7869211 7.7141535 9.9581906 5.1157075 9.0666228 -1.0341603 12.2422302 5.1754128 4.7208475 9.2178925 4.8363231 9.1754138 10.5210288 10.5109248 10.8367104 -0.0340126 13.2923899 2.1358960 10.4983163 -1.0341603 8.5358162 5.2513631 7.9288565 9.2103243 11.848752 5.135884 8.118246 11.887429 10.768881 10.438651 12.501965 10.749777 9.123307 10.802011 13.512493 8.558417 8.569587 9.522466 -1.034160 7.150836 11.003164 11.291828 4.358277 8.662928 8.301351 7.209135 10.307051 9.728342 8.255979 11.402151 7.558418 1.773321 4.666399 7.510886 10.160102 11.461066 7.332283 8.730832 11.442200 10.381702 9.657704 10.915422 11.094599 10.965608 10.718759 8.963140 -1.034160 10.527759 10.482109 9.847839 10.731246 8.018528 11.596667 10.166246 7.375351 13.461878 9.725016 10.356129 12.826756 10.972286 10.012402 4.095241 TCGA-BH-A6R8 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 3 2 NA NA 1 1 3 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 12.09551870 0.04949137 7.33801341 11.69293687 1.27190371 9.61812117 1.46456372 9.17709608 11.13234594 8.08111802 8.92707125 7.76606505 8.53603152 8.95140421 7.87819686 9.45679937 9.97632167 9.47299762 5.54138474 3.59385570 10.82979796 9.64198868 14.48695858 10.51781621 8.68494739 10.39825972 6.41876509 9.61938715 NA NA 6.43035386 9.72372391 11.94182140 5.53065759 12.96702798 12.57203139 8.39086498 7.39825972 5.44184862 6.38343301 7.35026562 7.35331270 6.37745870 12.11942884 1.46456372 9.59642609 13.49609800 2.16501148 10.45822573 10.51237466 6.92809313 8.51713709 1.63450034 15.83121300 11.90790118 NA 9.07467107 NA 2.78649181 9.98076152 9.23192603 7.80664370 11.17063334 9.19418976 9.32488012 1.04956107 10.35445326 9.94182143 7.28474823 8.08662085 0.78651272 11.55170038 13.57407331 7.92190876 10.73311110 9.72666401 9.61938715 -0.53533173 6.39530620 7.63949483 7.85688674 11.35635276 -1.53533173 3.32254832 8.62191597 9.43539399 10.24100212 8.56916789 5.74997130 4.87396081 9.21024346 11.41403107 6.21945703 13.38510804 8.74185660 7.01531580 10.11112784 11.97397297 11.94951783 10.11606930 10.26182531 10.83307556 10.16976945 10.02011684 4.78649704 9.39086498 10.33570432 10.69068021 NA 11.45236599 8.72548862 -1.53533173 2.96919655 8.14756365 10.33223397 8.41731035 9.90491922 15.56371201 10.78254691 9.43179531 7.59642609 0.78651272 14.93773575 9.28075268 12.69060490 10.16760744 10.52289907 9.50211595 7.68373785 10.93132110 -0.0037395 1.1564000 1.7547000 -0.0151910 -0.0127130 0.0000000 0.6099100 1.1502000 -0.0052610 0.6010800 0.6010800 0.6085900 -0.0257560 -0.0257560 -0.0238400 -0.0238400 -0.0238400 0.6965200 0.1370200 -0.7055000 -0.0210980 -0.0353120 -0.0402090 -0.0402090 1.1266000 0.0274970 0.0274970 0.0274970 1.6869000 -0.0510660 -0.0037395 -0.0011087 -0.0151910 0.0000000 0.0000000 0.6155600 0.6357300 1.1502000 -0.0052610 -0.0052610 0.7629300 0.7591000 0.6010800 0.0758470 0.0758470 0.0758470 0.0758470 -0.0257560 -0.0257560 -0.0238400 -0.0238400 0.1370200 0.1109600 0.1109600 -0.6608700 -0.0210980 -0.0353120 -0.0547400 -0.0648810 -0.0323140 0.5836300 0.0274970 0.0274970 0.6236900 -0.0286280 -0.5183500 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 7.8525863 12.1002872 4.1650115 10.0095335 2.1914047 10.7542998 1.0495611 NA 9.2068786 8.4418490 NA 5.0495306 5.2589862 10.5844828 9.1307932 1.4645637 5.6642410 8.9342110 6.5678572 13.1941367 10.0765298 7.0229903 9.3616583 -0.3980183 9.1378782 9.3248801 6.8308916 2.8568861 10.6605564 3.6740199 12.1507413 11.9737255 7.1263472 9.8341664 12.1282384 9.7751819 2.3714473 -0.5353317 -1.5353317 2.1650115 10.0732859 10.6335545 9.2823522 1.0495611 7.1916051 7.9342110 10.3395504 5.6244402 10.3725864 NA 9.2903230 2.3714473 2.0495262 9.9726015 6.9396944 3.1650115 10.3310753 8.2009712 9.3555934 0.4645637 12.8881446 -1.5353317 11.2397678 NA 7.5835101 3.7499740 8.3609015 8.7089328 12.4913856 4.5089610 8.8308913 12.9670280 8.9372599 11.4839861 12.1194288 11.1093267 8.7706309 10.1663087 12.6831323 8.0588939 7.8568867 10.4993681 -0.5353317 7.4216710 10.8973720 10.8913580 7.3037725 8.2622306 8.8675811 7.6543933 9.6807087 6.8132976 9.1147233 10.5178162 7.6319875 0.4645637 3.6344887 8.7810203 7.9920461 9.9629197 10.2063984 9.7231351 10.5413846 5.7406928 7.8066437 11.1790293 10.3627926 9.2557320 10.4461364 7.9054382 -1.5353317 9.8888772 4.4356553 5.0191592 10.2410021 5.4645703 10.5905314 9.2102435 6.4191731 12.2235210 10.5450536 9.9969249 12.1112403 10.3291422 9.0095336 -0.5353317 TCGA-C8-A8HR NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 NA NA 3 3 2 3 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.3842029 9.7058012 6.0136342 11.3775905 2.3891538 10.1715948 1.3891262 9.2061262 11.4319418 11.7441264 9.6799294 7.4871744 9.0136334 10.1694088 5.8702685 9.0425847 10.0245584 10.0803044 8.4003697 6.7525466 11.7386080 11.4498384 12.0752052 10.8122584 9.5953429 10.2445301 7.3198798 10.1986427 1.9740887 0.3891262 9.3316571 12.3606860 12.6580743 8.0544784 12.4818996 12.3393338 10.0768097 6.4408044 3.1964969 8.4243998 8.7050469 8.8969372 8.6699133 11.5061362 2.8916525 11.0118044 13.0043123 5.5590665 9.7180268 10.5611532 7.1748678 5.6989991 0.3891262 14.2457525 9.7147852 3.6621599 8.8403537 0.8042188 5.1440300 9.6989977 9.9482009 8.9347506 9.9353939 9.3050218 10.3496271 4.4766085 10.8195951 10.5644841 6.1529074 7.0895818 4.3277448 9.5855397 14.8474636 8.0567271 10.9539271 10.6307284 7.8756425 -0.1957812 6.1261077 8.6883503 8.7540066 10.9772324 NA 4.5320987 7.7110708 10.1210272 10.8320859 6.8756425 6.5252796 4.8265485 10.1085313 11.8162807 1.8041775 13.5883547 5.0330000 7.3355619 11.9339459 12.3837316 12.5642761 8.2135709 10.2481596 10.7286214 10.3451458 10.9731654 4.5590696 8.8553890 11.3032784 11.5787611 1.1261139 10.4690716 9.1418019 1.3891262 4.0167459 9.4552317 9.9778572 9.4597107 9.2768709 14.8325609 10.6311257 9.4133586 9.3947671 4.0895829 13.9640513 8.4059507 13.5318346 12.6533896 9.6211636 9.7750049 7.8995769 9.5270302 0.1510200 0.1510200 0.1510200 -0.0473130 0.0819250 -0.0447970 0.0721350 -0.1174100 -0.1174100 0.1083600 0.1083600 0.2574900 0.0188280 0.0188280 0.1152400 0.0163180 0.0163180 0.0108680 0.0198080 -0.1844400 -0.0609930 -0.0291500 0.0303360 0.0303360 0.0303360 -0.0014992 -0.0014992 -0.0201420 0.1605800 0.0000000 0.1510200 0.0121230 -0.0473130 -0.0798580 -0.1637400 -0.1911400 -0.1911400 -0.1174100 -0.1174100 -0.1953500 0.0518630 0.0518630 -0.1963400 -0.1107400 -0.1107400 -0.1107400 -0.1107400 0.0188280 0.0188280 0.1152400 0.0188280 0.0198080 0.0198080 0.0198080 -0.1919700 -0.0609930 0.1006200 -0.0948320 0.0303360 0.0303360 -0.0450680 -0.1875800 -0.0201420 0.1605800 -0.1942200 -0.0111730 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 9.3985045 13.8062038 8.1261082 10.7634575 4.6584229 10.8614948 4.6370711 3.3277448 9.1056762 9.0580275 NA 8.7140731 6.1705020 10.0491383 9.7518168 4.9539264 11.3827885 9.7518168 10.2538445 10.0574366 9.4578938 7.2007849 12.0127192 4.1261056 7.6868233 10.3496271 4.5046204 NA 11.2597641 5.4040925 12.8143584 11.8129587 8.9615270 9.5227129 10.6179612 9.3423690 5.5985945 2.8916525 0.3891262 3.1261139 9.1261082 9.6806969 10.1215926 6.5855395 8.7934326 8.4096595 9.8369145 6.4976666 10.0750592 0.3891262 11.6000167 2.7110764 5.1617305 9.2713678 7.4014504 5.5590665 9.9392479 9.2272958 6.9640509 2.8916525 13.4533239 3.5046204 10.5089482 NA 7.6275470 7.4115101 8.4298887 8.8662261 12.876230 6.462391 8.487174 12.481900 9.925066 10.423024 11.506136 10.797472 9.004588 10.409660 13.191861 11.382553 8.754007 7.562403 1.389126 8.075643 10.861495 11.475721 5.838044 8.929593 9.386322 8.557397 10.156428 7.899577 8.822380 10.812258 7.292020 1.804177 8.255391 7.539837 11.314697 10.723416 9.095351 9.898258 9.512402 7.255391 8.934751 11.041987 10.572778 10.909761 10.570295 8.669913 2.891652 9.812714 7.110515 6.886329 10.832086 7.339455 11.175856 10.108531 7.213571 13.810068 10.034200 10.274330 12.112235 10.487613 9.586359 1.611550 TCGA-OL-A6VR NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 2 NA NA 1 3 2 3 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8914834 7.6841083 6.1287182 12.0201589 2.0905825 9.7528703 NA 8.7052934 11.7435565 9.1113650 9.7645235 8.0414516 9.0213209 10.3819186 6.5072301 8.8691299 11.0699066 9.4792158 6.8262599 2.7426530 11.2147048 8.8997774 13.0657661 8.1658718 9.4393117 10.1038064 2.7426530 10.1057755 -1.7169079 1.4531751 6.0776446 11.5596438 13.1168599 7.0613053 12.7445161 13.0520848 9.6598966 6.5824371 4.6582686 8.5949769 7.9503401 9.4537795 6.8530837 13.3357966 5.1287182 10.9714788 13.8518379 5.7508343 10.1178102 11.5199902 8.2846367 6.4975469 NA 13.5394310 6.6841076 3.2832254 9.3062898 -1.7169079 2.5311444 9.6302963 9.2417813 9.6889019 11.8960971 8.9189467 10.1983609 1.2832106 10.8476162 10.6533711 8.3956682 7.7487946 10.6763508 11.4211803 14.4630793 7.8225230 11.1848497 10.2454015 6.6926197 -0.7166708 8.0280624 8.1396542 8.2846367 10.7952282 NA 3.6407829 7.9450066 10.0608948 10.2117469 12.1875809 4.1658718 2.1901091 9.1216446 11.6566375 0.6051150 13.3105730 6.8644288 7.9940349 12.7194195 10.2356058 12.5119721 8.1719719 10.5473779 10.5296722 10.7044413 10.7331509 5.2139654 9.3493177 11.3061164 13.4538187 0.2832106 10.3503267 9.9234735 0.2832106 3.4981360 9.4092876 10.9631485 10.5353026 8.8747509 14.7833235 10.5798580 9.9884289 8.4086418 2.5311444 16.2669069 7.1474146 11.4288423 13.0553369 9.8488066 9.8756856 8.0792682 10.4188929 0.00000000 0.00000000 0.00000000 0.00194180 -0.00083160 -0.00456950 -0.02907400 -0.74238000 -0.74089000 1.54750000 1.56620000 1.76950000 0.00708260 0.00708260 -0.00263220 -0.00263220 -0.00263220 0.00708260 0.00037257 0.04840400 1.66930000 0.00861350 0.02342600 0.02342600 0.02342600 0.02693500 0.02693500 0.02693500 -0.00097017 0.02020300 0.00000000 0.00166420 0.00194180 0.03888800 -0.00456950 -0.02907400 -0.02907400 -0.74238000 -0.74089000 -0.74089000 0.00027728 0.00027728 -0.77770000 -0.00073079 -0.00073079 -0.00073079 0.04599100 0.00708260 0.00708260 -0.00263220 -0.00207840 0.00708260 0.00037257 0.04075100 0.00013863 -0.15605000 0.00861350 -0.75694000 0.02342600 0.02342600 0.00097064 0.02693500 0.02693500 -0.00097017 -0.01285100 0.02518600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 7.0111490 11.6684169 10.4512738 9.5120473 2.7998748 11.0408269 1.8681731 1.4531751 9.4399437 7.0480999 0.6051150 5.8454700 1.4531751 10.2497340 10.0111490 1.7426530 7.3166517 9.0604838 10.8177746 11.7285021 9.6621790 7.1129513 10.2888530 NA 10.2110065 10.1983609 7.7073950 NA 10.7569343 3.9270810 13.4529970 12.4434939 6.6186190 9.9284367 8.1240065 9.7840704 3.7094892 0.2832106 NA 3.0905825 10.2665784 10.3231757 9.9266339 4.7094947 9.4052476 8.6130247 10.6833075 6.3546902 9.3118253 NA 9.9871321 4.1658718 4.3276227 9.1001482 7.2872802 3.6755450 8.7354697 6.4430994 8.8445165 -1.7169079 13.8400938 0.6051150 10.2522553 -1.7169079 8.3493179 4.2832254 7.7750815 8.4705808 13.088612 4.327623 8.990588 12.744516 10.539142 10.155903 13.335797 12.024063 9.205047 10.265866 12.475059 11.354020 8.284637 8.460648 2.090582 7.552356 11.020053 10.8775532 7.5778495 8.4841273 8.7538873 7.6604388 10.2494816 5.1658718 6.0711320 8.1658718 6.5406163 1.9836777 9.9392064 5.7564469 9.5429719 9.4537795 10.9798875 9.5078333 11.5008834 3.4125106 9.6889019 11.4171735 10.7485399 8.4176547 10.2124869 8.9225692 NA 10.1304699 5.4926832 5.8756867 10.2117469 5.6755450 10.9569792 9.1216446 6.6141459 14.4115653 10.4559686 10.1689249 12.3525105 10.2396047 9.3132059 0.8682126 all_p NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.65750187780228e-06 2.68375504126967e-06 2.67857279638075e-06 2.77107709881703e-06 3.23393964921773e-06 3.24787245456247e-06 3.38420882157618e-06 3.67087235050797e-06 3.78622395972494e-06 4.82344426357817e-06 4.89081866342209e-06 4.89986925453191e-06 4.93898611432218e-06 4.96178793653862e-06 5.01004229626501e-06 5.02979052209894e-06 5.12973082479164e-06 2.63147789106091e-05 2.64177186277094e-05 2.64461604196344e-05 2.64476797122752e-05 2.64549014640213e-05 2.65882308148352e-05 2.66031147424731e-05 2.66505260717884e-05 2.66704091842713e-05 4.51616142571032e-05 4.53761233003148e-05 4.5421430043032e-05 4.54573460153028e-05 4.57526844379542e-05 4.60121304116907e-05 4.60411026681413e-05 4.60950081288437e-05 2.86085114785188e-05 2.86270288533307e-05 2.86384918449759e-05 2.86862135331168e-05 2.87650461424622e-05 2.88199848084222e-05 2.8956838363475e-05 2.9026722642869e-05 3.21694460037749e-06 3.27304215410181e-06 3.29553821821266e-06 3.30402106815036e-06 3.3124356525809e-06 3.31617621807435e-06 3.46515222974837e-06 3.47224884159909e-06 3.52296310283107e-06 3.57754509562444e-06 3.67729152865899e-06 3.7633638261722e-06 3.82043356576894e-06 3.8819109432464e-06 3.93404558278684e-06 3.9657847727373e-06 3.993456775238e-06 4.03249437765492e-06 1.64588982407308e-05 1.65076842413048e-05 1.65412130496624e-05 1.65695335338836e-05 1.66023286365513e-05 1.6655118817729e-05 1.67689482696479e-05 1.67939476657445e-05 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA all_q NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0547 0.00196 0.00487419 0.00153 0.0782 0.0164 0.00424 0.0302 1.88e-12 7.07e-11 3.32e-05 0.0112 0.00409 1.81e-07 0.069 6.94e-05 3.29e-05 0.0212 2.12e-12 2.12e-12 0.000258 0.0695 6.94e-05 0.0892 0.00247 2.64e-11 5.48e-11 4.59e-07 0.0248 2.82e-06 2.12e-12 0.00167 0.1 1.88e-12 0.0853 0.01454431 0.1 0.00229 0.0246 0 2.12e-12 0.05438404 0.08688172 0.06206378 0.0266 2.68e-11 0.0464 6.62e-05 2.12e-12 0.005999675 0.0548 0.00229 0.0101 0.0815357 0.004320766 0.01251492 0.00487419 0.01828906 0.0001190396 2.40273e-05 0.04516517 0.07098375 6.739496e-05 0 0.07280718 0.08549379 8.442784e-12 2.297188e-06 0.0001138984 1.013765e-07 0.07764389 2.757398e-06 0.06689017 0 0.0167751 4.100889e-06 0.01828906 0.06074152 0.04244773 8.372829e-10 0.04972795 1.778613e-11 0.01601806 6.989139e-09 0.07092343 0.03639074 9.903294e-05 0.005270252 0.02910585 0.01880099 8.105072e-13 0 0.07346658 1.273654e-11 0.06265194 0.01270944 0.0003262955 4.426616e-11 0.0778275 0.01828906 0.06074152 0.08045798 0 0.005547429 0.07346658 0.01804644 1.803379e-11 0.01270944 0.01454431 2.578887e-11 3.667859e-06 0 0.06950602 0.05438404 0.08688172 0.06689017 0.06206378 0.0001044733 3.343342e-11 3.969649e-08 0.001247935 1.778613e-11 0.06689017 0.005999675 0.01601806 0.04524163 2.40273e-05 0.06074152 0.01828906 1.40933e-05 0.04579228 0.07257746 0.03697715 0.06131516 0.00487419 0.001305882 1.527695e-12 0.02570082 0.09979063 0.02784371 0.08072251 0.01767083 0.04409561 0.08072251 0.01313256 2.263251e-12 0.07822243 0.01471207 3.057833e-13 4.635598e-05 0.05574889 0.008338122 0.07937557 0.001586072 0.02640696 0.01272801 0.0259803 0.007780979 0.006178343 1.203453e-08 0.01053676 0.02784371 3.057833e-13 0.03335517 0.01181244 0.06552284 0.006022398 0.01272801 0.03989874 0.08511341 0.03763519 0.002827269 0.001086113 1.547011e-08 3.057833e-13 0.06904737 0.07458627 3.055389e-12 0.09663085 0.03998771 0.07146377 0.001700371 0.004314685 0.07458627 0.0001054527 5.038141e-06 0.06019953 0.02707009 0.07146377 3.057833e-13 0.03989874 0.07822243 0.07146377 8.729684e-13 0.03002673 0.01454431 0.006112506 9.647443e-07 1.8942e-08 0.02700663 0.09090978 0.05284687 0.001839494 3.057833e-13 0.08072251 0.0002556057 0.07146377 0.05438404 0.08688172 2.260289e-05 0.06206378 0.05600269 0.002204762 1.213096e-07 0.001086113 0.01087777 0.01806515 7.11809e-07 0.08072251 3.057833e-13 0.08026955 0.09553588 0.02570082 0.005999675 0.04921077 0.0004839089 0.01014259 0.02848171 0.03697715 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4.0796e-13 2.6922e-43 6.2885e-22 0.029977 2.4412e-12 0.0030731 0.19973 1.645e-05 8.6364e-14 4.6805e-96 9.4933e-35 8.1846e-92 1.7543e-05 9.2314e-05 0.0013355 4.7208e-211 1.6388e-64 0.0001442 3.0026e-15 0.012283 0.0013599 1.5643e-12 0.14779 7.7157e-137 7.2744e-83 0.069917 3.0608e-07 0.0024361 2.0617e-48 9.7599e-47 6.4798e-11 7.1467e-12 1.5499e-31 0.015673 5.7156e-15 2.0601e-12 4.5869e-06 2.9326e-07 1.9801e-13 6.1079e-23 0.048612 1.7051e-10 3.5566e-48 4.465e-07 8.382e-27 0.0017448 0.098416 1.7276e-36 2.687e-13 2.1072e-19 2.6232e-59 0.00055694 1.0588e-06 1.1569e-07 5.6844e-51 4.9949e-10 3.3709e-15 2.4212e-08 3.8288e-17 2.809e-10 6.3082e-06 1.4308e-35 0.016896 0.00082144 5.8973e-09 0.045062 1 1 1 1 1 1 1 1 1 0 1 1 0.0873 1 1 1 0.956 0.294 0 0 0 1 1 1 1 1 1 1 1 0.00908 0.407 1 1 0.00107 0.0136 0.00527 0 1 1 1 1 0.199 0.000186 0 1 1 0 3.2e-06 4.41e-12 0 0 0 0 9.48e-10 4.89e-09 1 1 2.12e-14 2.94e-13 1 1 1 0 1 1 1 1 9.57e-12 4.6e-08 1 0.000626 1 1.88e-05 1 1 0 0.984 2.62e-08 3.2e-06 1 0.000100511121977006 0.000101074867452807 0.000101074867452807 0.000103842222042122 0.000118782269919927 0.000119048559476494 0.000123284858788462 0.000131575291855028 0.00013489558723708 0.000100496884340797 0.000101662828086582 0.00010173225046647 0.000102425027520996 0.000102658873753193 0.000103536999380122 0.000103824667857092 0.00010515653039452 0.000100122057136606 0.000100492257021998 0.000100563279913441 0.000100563279913441 0.000100569273299205 0.000101054564483779 0.000101089566131061 0.00010122653975327 0.000101280466682713 0.000100050863869672 0.000100501089204502 0.000100588930232045 0.000100655955489945 0.000101284742211721 0.000101846432797448 0.000101897900724347 0.000101991861235526 0.000100360776581003 0.000100405964164842 0.000100426396402835 0.000100573943688042 0.000100810649612792 0.000100983322064759 0.000101422948998613 0.000101607788791525 0.000100186452991477 0.000101672458191744 0.000102098639685635 0.000102183734909775 0.000102204780534215 0.000102204780534215 0.000106427968656444 0.000106462376702661 0.000107831726312427 0.00010229596843251 0.00010481163406645 0.000107093551436792 0.000108544184275292 0.000110115225386929 0.000111416674104554 0.000112137285621496 0.000112740790798874 0.000113304187450386 0.000100033713156049 0.000100296005141406 0.00010046545150586 0.000100603159636197 0.000100767932651286 0.00010105391233618 0.000101675304450479 0.000101792236719147 4.7208e-211 3.0608e-07 0.0030731 7.7157e-137 0.012283 6.2885e-22 0.0013599 1.5643e-12 1.6388e-64 0.0001442 2.6922e-43 8.1846e-92 2.4412e-12 6.2885e-22 0.19973 7.2744e-83 2.0617e-48 0.098416 1.0588e-06 6.4798e-11 1.1569e-07 2.809e-10 0.098416 0.048612 2.4212e-08 0.00055694 8.382e-27 3.5566e-48 2.809e-10 2.4212e-08 5.7156e-15 0.098416 4.9949e-10 2.1072e-19 2.0601e-12 2.9326e-07 3.8288e-17 4.9949e-10 6.1079e-23 0.098416 0.098416 2.6232e-59 9.7599e-47 2.6232e-59 2.0601e-12 2.6232e-59 1.7276e-36 4.465e-07 0.098416 5.6844e-51 6.4798e-11 6.4798e-11 9.7599e-47 2.6232e-59 2.809e-10 1.4308e-35 0.098416 4.9949e-10