Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBER.OF.LYMPH.NODES RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 194 (19%) 831 0.52676 1 0.042298 1 0.87817 1 0.063839 1 0.55284 1 0.77181 1 1 1 0.01361 1 0.02586 1 0.23729 1 0.02604 1 0.51952 1 1q gain 669 (65%) 356 0.3468 1 0.57938 1 0.03085 1 0.00089999 0.827 0.50635 1 0.24203 1 0.52796 1 0.00085999 0.791 0.8834 1 0.43714 1 0.072869 1 0.074402 1 2p gain 116 (11%) 909 0.29191 1 0.34161 1 0.79758 1 0.58718 1 0.97136 1 0.87523 1 0.62387 1 9.9999e-06 0.00959 0.37792 1 0.96678 1 0.00304 1 0.027214 1 2q gain 71 (7%) 954 0.90129 1 0.66197 1 0.65281 1 0.476 1 0.82488 1 0.87062 1 1 1 0.0095399 1 0.68085 1 0.41139 1 0.071299 1 0.10289 1 3p gain 132 (13%) 893 0.422 1 0.30725 1 0.051249 1 0.04707 1 0.41657 1 0.00105 0.964 1 1 0.00084999 0.784 0.46511 1 0.32193 1 0.48774 1 0.79215 1 3q gain 204 (20%) 821 0.56195 1 0.53922 1 0.35383 1 0.080519 1 0.44815 1 0.13869 1 0.70291 1 9.9999e-06 0.00959 0.25471 1 0.015276 1 0.0069999 1 0.83058 1 4p gain 75 (7%) 950 0.35764 1 0.7987 1 0.096539 1 0.081079 1 0.70065 1 0.28412 1 0.56834 1 0.01335 1 0.7883 1 0.76362 1 0.56105 1 0.73611 1 4q gain 72 (7%) 953 0.22758 1 0.9813 1 0.20429 1 0.2457 1 0.46221 1 0.33135 1 0.55302 1 0.0071899 1 1 1 0.72052 1 0.45089 1 0.73096 1 5p gain 298 (29%) 727 0.22273 1 0.17494 1 0.5639 1 0.62752 1 0.0070299 1 0.11106 1 0.31377 1 0.52278 1 0.28194 1 0.81606 1 0.28588 1 1 1 5q gain 200 (20%) 825 0.95424 1 0.012521 1 0.36343 1 0.20591 1 0.29504 1 0.36046 1 1 1 0.66647 1 0.48134 1 0.58507 1 0.0058199 1 1 1 6p gain 199 (19%) 826 0.34297 1 0.91561 1 0.54948 1 0.076339 1 0.56076 1 0.88688 1 0.70137 1 0.00021 0.197 0.21583 1 0.2523 1 0.02275 1 0.38755 1 6q gain 141 (14%) 884 0.2051 1 0.97187 1 0.52186 1 0.059559 1 0.15632 1 0.9167 1 1 1 0.00184 1 0.4168 1 0.054331 1 0.29812 1 0.31629 1 7p gain 293 (29%) 732 0.36846 1 0.18339 1 0.91942 1 0.81644 1 0.86389 1 0.52435 1 0.015952 1 0.084789 1 0.21548 1 0.72799 1 0.46987 1 0.85017 1 7q gain 250 (24%) 775 0.76554 1 0.99068 1 0.42469 1 0.35207 1 0.57089 1 0.24293 1 0.14927 1 0.15043 1 0.9352 1 0.79819 1 0.096459 1 0.68979 1 8p gain 276 (27%) 749 0.85273 1 0.88871 1 0.44634 1 0.89012 1 0.56451 1 0.26188 1 0.49933 1 0.21218 1 0.8749 1 0.66862 1 0.17584 1 1 1 8q gain 506 (49%) 519 0.81386 1 0.8751 1 0.49841 1 0.59351 1 0.53017 1 0.086249 1 0.37952 1 9.9999e-06 0.00959 0.020949 1 0.566 1 0.03073 1 0.17259 1 9p gain 136 (13%) 889 0.76842 1 0.80629 1 0.15729 1 0.21209 1 0.17266 1 0.93689 1 0.3769 1 0.24284 1 1 1 0.63281 1 0.28759 1 1 1 9q gain 112 (11%) 913 0.20493 1 0.74147 1 0.49658 1 0.37404 1 0.30499 1 0.93077 1 0.62046 1 0.1245 1 0.65406 1 0.90595 1 0.34899 1 1 1 10p gain 209 (20%) 816 0.87164 1 0.67519 1 0.27101 1 0.24576 1 0.26559 1 0.12273 1 1 1 9.9999e-06 0.00959 0.082272 1 0.34606 1 0.00079999 0.738 1 1 10q gain 122 (12%) 903 0.7484 1 0.62139 1 0.61833 1 0.33098 1 0.66205 1 0.37439 1 1 1 0.00329 1 0.083432 1 0.22614 1 0.075459 1 0.59438 1 11p gain 131 (13%) 894 0.77042 1 0.76763 1 0.87147 1 0.76552 1 0.31338 1 0.61873 1 0.64065 1 0.00348 1 0.83459 1 0.0119 1 0.7667 1 0.4522 1 11q gain 91 (9%) 934 0.13826 1 0.87998 1 0.48639 1 0.74562 1 0.50278 1 0.60727 1 1 1 0.00078999 0.73 0.71241 1 0.1282 1 0.21163 1 0.55864 1 12p gain 217 (21%) 808 0.27179 1 0.57508 1 0.53772 1 0.066489 1 0.14205 1 0.65337 1 0.061567 1 0.03164 1 0.17072 1 0.38269 1 0.68178 1 0.4019 1 12q gain 184 (18%) 841 0.19444 1 0.14537 1 0.092189 1 0.02207 1 0.0054799 1 0.54371 1 0.03224 1 0.085689 1 0.20183 1 0.0051581 1 0.85077 1 0.37634 1 13q gain 87 (8%) 938 0.5948 1 0.40413 1 0.66971 1 0.33494 1 0.48107 1 0.16289 1 0.61323 1 0.00289 1 0.31651 1 0.94811 1 0.35853 1 0.11649 1 14q gain 137 (13%) 888 0.47264 1 0.11337 1 0.22206 1 0.17177 1 0.064619 1 0.66066 1 0.37708 1 0.14585 1 0.53748 1 0.041097 1 0.73922 1 0.21281 1 15q gain 84 (8%) 941 0.48764 1 0.93778 1 0.58538 1 0.90738 1 0.95642 1 0.28792 1 0.61147 1 0.00109 0.998 0.16 1 0.99096 1 0.20638 1 0.76126 1 16p gain 450 (44%) 575 0.55483 1 0.036539 1 0.52145 1 0.70506 1 0.35365 1 0.79444 1 0.54876 1 0.02864 1 0.43849 1 0.37259 1 0.02939 1 0.085057 1 16q gain 135 (13%) 890 0.089961 1 0.61658 1 0.18235 1 0.20528 1 0.2659 1 0.44081 1 0.045201 1 0.2036 1 0.60511 1 0.25617 1 0.70808 1 0.21548 1 17p gain 102 (10%) 923 0.13714 1 0.96422 1 0.11049 1 0.04229 1 0.069739 1 0.72601 1 0.0025169 1 0.04596 1 0.046408 1 0.89449 1 0.64018 1 0.7755 1 17q gain 208 (20%) 817 0.014691 1 0.73477 1 0.728 1 0.29755 1 0.74109 1 0.44626 1 0.0020249 1 0.04227 1 0.067785 1 0.39904 1 0.89334 1 0.67655 1 18p gain 168 (16%) 857 0.40583 1 0.36068 1 0.11096 1 0.52921 1 0.04224 1 0.68494 1 0.69867 1 0.0017 1 0.50847 1 0.012464 1 0.00041 0.382 0.25133 1 18q gain 143 (14%) 882 0.9839 1 0.58278 1 0.21541 1 0.25951 1 0.1866 1 0.04552 1 0.65755 1 0.02226 1 0.48018 1 0.23389 1 0.26275 1 0.6116 1 19p gain 181 (18%) 844 0.97799 1 0.45605 1 0.32607 1 0.19646 1 0.25438 1 0.12218 1 0.11215 1 0.2511 1 0.35928 1 0.02117 1 0.69355 1 1 1 19q gain 214 (21%) 811 0.64655 1 0.19712 1 0.25862 1 0.59411 1 0.12258 1 0.02635 1 0.25506 1 0.20453 1 0.60605 1 0.013761 1 0.98243 1 0.8368 1 20p gain 397 (39%) 628 0.38017 1 0.22064 1 0.1405 1 0.29002 1 0.01091 1 0.01808 1 0.027619 1 9.9999e-06 0.00959 0.017818 1 0.51775 1 0.84208 1 0.38312 1 20q gain 431 (42%) 594 0.348 1 0.71578 1 0.52688 1 0.01617 1 0.053899 1 0.04016 1 0.21811 1 9.9999e-06 0.00959 0.11902 1 0.26134 1 0.43091 1 0.17097 1 21q gain 191 (19%) 834 0.010176 1 0.050646 1 0.623 1 0.53037 1 0.64227 1 0.26911 1 1 1 9.9999e-06 0.00959 0.047874 1 0.60637 1 0.02008 1 0.27071 1 22q gain 97 (9%) 928 0.19923 1 0.7589 1 0.15568 1 0.04384 1 0.37511 1 0.87428 1 1 1 0.00069999 0.647 0.1901 1 0.15327 1 0.01735 1 1 1 xq gain 137 (13%) 888 0.12923 1 0.097605 1 0.46126 1 0.29431 1 0.68293 1 0.20065 1 1 1 0.00021 0.197 0.099824 1 0.50526 1 0.11351 1 0.60854 1 1p loss 233 (23%) 792 0.062694 1 0.00021868 0.204 5.9999e-05 0.0563 2e-05 0.0189 0.00321 1 0.32888 1 1 1 0.54629 1 0.67655 1 0.00041353 0.385 0.80589 1 0.67728 1 1q loss 49 (5%) 976 0.35322 1 0.34403 1 0.90884 1 0.40532 1 0.092819 1 0.3101 1 1 1 0.22798 1 0.62439 1 0.19792 1 0.64065 1 1 1 2p loss 172 (17%) 853 0.48775 1 0.42657 1 0.23507 1 0.37402 1 0.065059 1 0.03659 1 1 1 0.27055 1 0.019436 1 0.44855 1 0.32441 1 0.052775 1 2q loss 199 (19%) 826 0.27838 1 0.59298 1 0.099919 1 0.27557 1 0.068829 1 0.04699 1 1 1 0.063769 1 0.1115 1 0.28558 1 0.49543 1 0.046468 1 3p loss 176 (17%) 849 0.2516 1 0.1412 1 0.84667 1 0.00147 1 0.925 1 0.37479 1 0.22774 1 0.01491 1 0.015653 1 0.74542 1 0.14009 1 0.046158 1 3q loss 98 (10%) 927 0.1223 1 0.67469 1 0.39605 1 0.00084999 0.784 0.93156 1 0.97798 1 0.61303 1 0.16669 1 0.042473 1 0.7568 1 0.28662 1 0.042561 1 4p loss 335 (33%) 690 0.25421 1 0.19154 1 0.47295 1 0.01903 1 0.60451 1 0.4287 1 0.75608 1 9.9999e-06 0.00959 0.70937 1 0.82557 1 0.0065299 1 0.5887 1 4q loss 295 (29%) 730 0.64503 1 0.78834 1 0.56527 1 0.04495 1 0.75068 1 0.26563 1 0.7383 1 9.9999e-06 0.00959 0.39554 1 0.78847 1 0.01343 1 0.85017 1 5p loss 135 (13%) 890 0.21532 1 0.0052618 1 0.95299 1 0.02205 1 0.84186 1 0.98572 1 1 1 9.9999e-06 0.00959 0.25503 1 0.33226 1 0.0454 1 0.46064 1 5q loss 216 (21%) 809 0.37201 1 0.0006877 0.637 0.22286 1 0.00111 1 0.37157 1 0.33383 1 0.13347 1 9.9999e-06 0.00959 0.44093 1 0.08216 1 2e-05 0.0189 0.30588 1 6p loss 175 (17%) 850 0.93229 1 0.045959 1 0.9937 1 0.43752 1 0.93483 1 0.16878 1 0.70099 1 0.49712 1 0.22676 1 0.82423 1 0.58317 1 0.49382 1 6q loss 260 (25%) 765 0.53025 1 0.001974 1 0.95313 1 0.31456 1 0.69729 1 0.7551 1 0.30754 1 0.43721 1 0.036453 1 0.45717 1 0.62896 1 0.55619 1 7p loss 108 (11%) 917 0.68776 1 0.50997 1 0.43974 1 0.28156 1 0.10377 1 0.082999 1 0.61758 1 0.00063999 0.593 0.64869 1 0.30023 1 0.23803 1 0.24999 1 7q loss 116 (11%) 909 0.11657 1 0.12602 1 0.6384 1 0.29999 1 0.37768 1 0.24712 1 1 1 0.13804 1 0.50842 1 0.94087 1 0.73442 1 0.025661 1 8p loss 377 (37%) 648 0.045846 1 0.14351 1 0.99961 1 0.27493 1 0.65525 1 0.306 1 0.75494 1 2e-05 0.0189 0.38431 1 0.58206 1 0.04507 1 0.48233 1 8q loss 85 (8%) 940 0.062074 1 0.10705 1 0.97625 1 0.75077 1 0.54064 1 0.25223 1 0.61394 1 0.60456 1 0.20467 1 0.93765 1 0.057309 1 0.54943 1 9p loss 298 (29%) 727 0.015001 1 0.6454 1 0.00173 1 9.9999e-05 0.0937 0.01356 1 0.03487 1 0.089483 1 9.9999e-06 0.00959 0.054011 1 0.18228 1 0.30433 1 0.57064 1 9q loss 272 (27%) 753 0.42675 1 0.7426 1 0.16602 1 0.00392 1 0.11196 1 0.2766 1 0.077332 1 9.9999e-06 0.00959 0.026699 1 0.96204 1 0.02486 1 0.55893 1 10p loss 162 (16%) 863 0.0073364 1 0.80906 1 0.098899 1 0.00441 1 0.11644 1 0.02593 1 0.22959 1 0.082709 1 1 1 0.22623 1 0.34542 1 0.3444 1 10q loss 219 (21%) 806 0.014002 1 0.77195 1 0.24096 1 0.0074099 1 0.11561 1 0.11419 1 0.47362 1 0.0094299 1 1 1 0.31617 1 0.03631 1 0.059976 1 11p loss 266 (26%) 759 0.11328 1 0.62494 1 0.01562 1 0.01006 1 0.061639 1 0.6127 1 0.73788 1 0.1052 1 0.69004 1 0.07591 1 0.0011 1 0.073107 1 11q loss 353 (34%) 672 0.97135 1 0.85007 1 0.1224 1 0.093429 1 0.04418 1 0.31278 1 0.20233 1 0.31248 1 0.60648 1 0.26321 1 0.00124 1 1 1 12p loss 144 (14%) 881 0.72483 1 0.43232 1 0.2541 1 0.0158 1 0.68835 1 0.18583 1 1 1 0.00044 0.409 0.36734 1 0.35078 1 0.28221 1 0.46385 1 12q loss 123 (12%) 902 0.87462 1 0.013446 1 0.24321 1 0.01315 1 0.56922 1 0.34203 1 0.37892 1 6.9999e-05 0.0657 0.3896 1 0.080753 1 0.01642 1 0.6086 1 13q loss 415 (40%) 610 0.046868 1 0.25691 1 0.79559 1 0.088979 1 0.77335 1 0.99567 1 0.76442 1 0.00033 0.308 0.43335 1 0.60431 1 0.095639 1 0.38281 1 14q loss 250 (24%) 775 0.027932 1 0.64824 1 0.84091 1 0.04557 1 0.082579 1 0.96755 1 0.31237 1 2e-05 0.0189 0.32866 1 0.064952 1 0.00023 0.215 0.42681 1 15q loss 303 (30%) 722 0.12504 1 0.86102 1 0.34515 1 0.0056199 1 0.03642 1 0.49788 1 1 1 0.00046 0.427 0.078246 1 0.12877 1 0.36983 1 0.35818 1 16p loss 163 (16%) 862 0.3674 1 0.91229 1 0.2804 1 0.97221 1 0.078029 1 0.4588 1 0.69003 1 0.052429 1 0.50385 1 0.02776 1 0.00263 1 0.64532 1 16q loss 559 (55%) 466 0.15002 1 0.0018472 1 0.31252 1 0.63305 1 0.1581 1 0.02092 1 0.24119 1 9.9999e-06 0.00959 0.14032 1 0.085301 1 0.67155 1 0.73683 1 17p loss 546 (53%) 479 0.24916 1 0.026522 1 0.22348 1 0.00476 1 0.77681 1 0.52413 1 0.36425 1 0.0062899 1 0.83356 1 0.88032 1 0.17283 1 1 1 17q loss 258 (25%) 767 0.91436 1 0.13364 1 0.98631 1 0.62747 1 0.17372 1 0.19296 1 0.075087 1 0.00108 0.99 0.62942 1 0.35412 1 0.0081799 1 1 1 18p loss 304 (30%) 721 8.9459e-07 0.000859 0.0033928 1 0.02946 1 0.00442 1 0.35438 1 0.66587 1 1 1 0.0091299 1 1 1 0.099203 1 0.02985 1 1 1 18q loss 304 (30%) 721 0.0034593 1 0.018934 1 0.0382 1 0.02218 1 0.10665 1 0.73511 1 1 1 0.01089 1 0.44392 1 0.21099 1 0.12944 1 0.71141 1 19p loss 182 (18%) 843 0.12042 1 0.055863 1 0.86637 1 0.46296 1 0.4024 1 0.13716 1 1 1 9.9999e-06 0.00959 0.58419 1 0.90229 1 0.00402 1 0.37679 1 19q loss 152 (15%) 873 0.11802 1 0.62529 1 0.69682 1 0.55674 1 0.27798 1 0.15036 1 0.67165 1 9.9999e-06 0.00959 0.11555 1 0.77756 1 0.04099 1 1 1 20p loss 90 (9%) 935 0.20293 1 0.11826 1 0.41295 1 0.079739 1 0.8328 1 0.078249 1 1 1 0.03718 1 0.45844 1 0.93648 1 0.053179 1 0.22021 1 20q loss 52 (5%) 973 0.35046 1 0.057504 1 0.26182 1 0.03486 1 0.95862 1 0.52977 1 1 1 0.0225 1 0.63276 1 0.24301 1 0.02436 1 0.10545 1 21q loss 170 (17%) 855 0.67413 1 0.4352 1 0.01751 1 0.16374 1 0.03141 1 0.097429 1 0.22766 1 0.01375 1 0.45208 1 0.21092 1 0.086019 1 0.24991 1 22q loss 454 (44%) 571 0.080397 1 0.57192 1 0.61718 1 0.50031 1 0.23063 1 0.57 1 0.55111 1 0.00121 1 0.0012093 1 0.24766 1 0.40102 1 0.86496 1 xq loss 171 (17%) 854 0.40983 1 0.14407 1 0.43192 1 0.072359 1 0.6525 1 0.080049 1 0.40607 1 0.061839 1 0.85162 1 0.34061 1 0.2297 1 1 1