Clinical Features Time to Death AGE NEOPLASM.DISEASESTAGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE PATHOLOGY.M.STAGE GENDER HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES RACE nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 32 (7%) 407 0.70491 1 0.29534 1 0.78667 1 0.94843 1 0.485 1 0.22011 1 0.71701 1 0.59997 1 0.20356 1 0.18038 1 0.12713 1 0.47998 1 1q gain 78 (18%) 361 0.51431 1 0.51022 1 0.18399 1 0.46122 1 0.093829 1 0.0171 1 0.16932 1 0.27164 1 0.44476 1 0.23156 1 0.019506 1 1 1 2p gain 78 (18%) 361 0.28451 1 0.88279 1 0.45971 1 0.59529 1 0.23883 1 0.21958 1 0.70819 1 0.044574 1 0.44476 1 0.073989 1 0.10794 1 0.84143 1 2q gain 74 (17%) 365 0.15616 1 0.40089 1 0.23782 1 0.50811 1 0.079719 1 0.13027 1 0.89852 1 0.063921 1 0.42604 1 0.1401 1 0.035416 1 0.59843 1 3p gain 45 (10%) 394 0.15929 1 0.068831 1 0.00235 1 0.82595 1 0.19061 1 0.00073999 0.667 0.63739 1 0.81781 1 1 1 0.94613 1 0.12604 1 0.18149 1 3q gain 64 (15%) 375 0.1679 1 0.20892 1 0.01662 1 0.62194 1 0.070089 1 0.00308 1 0.49883 1 0.4255 1 1 1 0.87543 1 0.12306 1 0.26683 1 4p gain 12 (3%) 427 0.66843 1 0.25446 1 0.20033 1 0.69121 1 0.02704 1 0.091819 1 0.3906 1 1 1 1 1 1 1 0.015347 1 0.00144 1 4q gain 17 (4%) 422 0.28153 1 0.80498 1 0.42241 1 0.95171 1 0.0064399 1 0.14576 1 0.45836 1 0.48969 1 1 1 0.33745 1 0.0061835 1 0.02857 1 5p gain 68 (15%) 371 0.55934 1 0.05983 1 0.27591 1 0.98617 1 0.02482 1 0.37659 1 0.35513 1 0.84675 1 1 1 0.29436 1 0.016176 1 0.15146 1 5q gain 42 (10%) 397 0.34049 1 0.90636 1 0.42869 1 0.83616 1 0.30725 1 0.34734 1 0.51781 1 0.63376 1 1 1 0.34139 1 0.97233 1 0.1726 1 6p gain 82 (19%) 357 0.90648 1 0.74877 1 0.1311 1 0.90351 1 0.03955 1 0.22912 1 0.27128 1 0.36846 1 0.0063237 1 0.66114 1 0.045429 1 0.29382 1 6q gain 74 (17%) 365 0.56275 1 0.51269 1 0.054879 1 0.9113 1 0.04968 1 0.13446 1 0.70199 1 0.35023 1 0.0046288 1 0.84127 1 0.071474 1 0.81879 1 7p gain 242 (55%) 197 0.98528 1 0.083467 1 5.9999e-05 0.0556 0.33297 1 8.9999e-05 0.0829 0.060769 1 1 1 0.035763 1 0.25619 1 0.28606 1 0.00033104 0.302 0.41347 1 7q gain 221 (50%) 218 0.82419 1 0.056369 1 0.01906 1 0.18118 1 0.01027 1 0.03862 1 0.9239 1 0.069078 1 1 1 0.46243 1 0.010831 1 0.24958 1 8p gain 129 (29%) 310 0.3289 1 0.22321 1 0.63737 1 0.77571 1 0.55137 1 0.9369 1 0.91651 1 0.35779 1 0.20771 1 0.4702 1 0.35925 1 0.97863 1 8q gain 222 (51%) 217 0.8909 1 0.020231 1 0.5825 1 0.23608 1 0.59981 1 0.32006 1 0.50414 1 0.035265 1 0.24839 1 0.55687 1 0.49445 1 0.8864 1 9p gain 78 (18%) 361 0.011765 1 0.2866 1 0.01746 1 0.35804 1 0.14078 1 0.03741 1 0.80303 1 0.0099152 1 1 1 0.90382 1 0.14298 1 0.03078 1 9q gain 69 (16%) 370 0.012112 1 0.39805 1 0.13921 1 0.30858 1 0.45075 1 0.17196 1 0.89642 1 0.019452 1 1 1 0.94328 1 0.38988 1 0.083119 1 10p gain 34 (8%) 405 0.020553 1 0.26622 1 0.36454 1 0.23594 1 0.03705 1 0.30197 1 0.72512 1 1 1 1 1 0.31505 1 0.034118 1 0.16492 1 10q gain 20 (5%) 419 0.60685 1 0.011881 1 0.38894 1 0.83329 1 0.052749 1 0.28066 1 0.64796 1 0.32937 1 1 1 0.67982 1 0.013267 1 0.04647 1 11p gain 52 (12%) 387 0.86181 1 0.0133 1 0.01293 1 0.096029 1 0.02279 1 0.056339 1 1 1 0.007487 1 0.038221 1 0.2173 1 0.019858 1 0.48594 1 11q gain 49 (11%) 390 0.74859 1 0.00035031 0.319 0.0078899 1 0.32806 1 0.01111 1 0.15409 1 1 1 0.00070286 0.634 0.034065 1 0.37276 1 0.017708 1 0.68555 1 12p gain 92 (21%) 347 0.42949 1 0.31573 1 0.083309 1 0.37542 1 0.24228 1 0.04928 1 0.90689 1 0.60735 1 1 1 0.50249 1 0.11715 1 0.9246 1 12q gain 85 (19%) 354 0.81408 1 0.15406 1 0.0079599 1 0.45498 1 0.072659 1 0.0076999 1 0.90378 1 0.21806 1 1 1 0.33995 1 0.028166 1 0.60999 1 13q gain 250 (57%) 189 0.91001 1 0.60335 1 0.00049 0.443 0.98861 1 0.00331 1 0.0017 1 0.38504 1 8.4777e-07 0.000789 0.2628 1 0.03001 1 0.012419 1 0.1777 1 14q gain 34 (8%) 405 0.69681 1 0.92281 1 0.61761 1 0.79918 1 0.66281 1 0.01609 1 0.48149 1 0.11051 1 1 1 0.71686 1 0.46056 1 0.01464 1 15q gain 12 (3%) 427 0.62045 1 0.28933 1 0.75829 1 0.50563 1 0.72229 1 0.12063 1 0.075666 1 1 1 1 1 0.050379 1 0.32025 1 0.29278 1 16p gain 105 (24%) 334 0.35153 1 0.10433 1 0.00371 1 0.93302 1 0.00177 1 0.3845 1 0.91136 1 0.0079452 1 0.56055 1 0.86214 1 0.0016572 1 0.42463 1 16q gain 103 (23%) 336 0.31308 1 0.073687 1 0.00107 0.961 0.94883 1 0.00111 0.993 0.49594 1 0.82159 1 0.0081207 1 0.55259 1 0.7128 1 0.0015997 1 0.44101 1 17p gain 26 (6%) 413 0.12085 1 0.70423 1 0.66483 1 0.76945 1 0.34701 1 0.11261 1 0.54607 1 0.76678 1 1 1 0.90084 1 0.6657 1 0.089239 1 17q gain 79 (18%) 360 0.21585 1 0.29483 1 0.15466 1 0.37815 1 0.15561 1 0.02402 1 1 1 0.27164 1 0.44937 1 0.29329 1 0.85861 1 0.70707 1 18p gain 22 (5%) 417 0.47115 1 0.51022 1 0.090809 1 0.96712 1 0.02958 1 0.27045 1 0.38223 1 0.018911 1 1 1 0.52975 1 0.053772 1 0.87818 1 18q gain 13 (3%) 426 0.75351 1 0.087364 1 0.4513 1 0.7181 1 0.29769 1 1 1 0.5836 1 0.020698 1 1 1 1 1 0.88065 1 0.47926 1 19p gain 71 (16%) 368 0.66164 1 0.96354 1 0.54064 1 0.64343 1 0.1189 1 0.02786 1 0.068582 1 0.25314 1 0.41173 1 0.29286 1 0.74734 1 1 1 19q gain 79 (18%) 360 0.62625 1 0.78317 1 0.89016 1 0.9078 1 0.29002 1 0.03549 1 0.21411 1 1 1 0.44937 1 0.33889 1 0.9512 1 0.9672 1 20p gain 236 (54%) 203 0.26691 1 0.39641 1 9.9999e-05 0.092 0.75623 1 0.19597 1 0.00198 1 0.12524 1 0.00021516 0.197 0.25254 1 0.062619 1 0.087122 1 0.79704 1 20q gain 311 (71%) 128 0.69866 1 0.2125 1 0.00205 1 0.30549 1 0.01623 1 0.0136 1 0.24848 1 9.992e-07 0.000929 0.55941 1 0.091029 1 0.017229 1 0.46657 1 21q gain 22 (5%) 417 0.48186 1 0.00076474 0.688 0.50318 1 0.14464 1 0.32764 1 0.50049 1 0.82907 1 0.50722 1 1 1 0.46886 1 0.17985 1 0.79949 1 22q gain 12 (3%) 427 0.82658 1 0.53512 1 0.50762 1 0.27194 1 1 1 0.51162 1 0.77579 1 0.38317 1 1 1 0.30645 1 0.82597 1 1 1 xq gain 73 (17%) 366 0.43892 1 0.69075 1 0.15551 1 0.01434 1 0.70637 1 0.52772 1 0.52334 1 0.57643 1 0.4213 1 0.89479 1 0.60854 1 0.64067 1 1p loss 94 (21%) 345 0.05677 1 0.96102 1 0.04162 1 0.62682 1 0.00197 1 0.01091 1 0.35168 1 0.23671 1 1 1 0.46952 1 0.00087687 0.788 0.4467 1 1q loss 54 (12%) 385 0.13418 1 0.5805 1 0.17314 1 0.88137 1 0.063819 1 0.19322 1 0.24412 1 0.67584 1 1 1 0.48982 1 0.056682 1 0.22161 1 2p loss 6 (1%) 433 0.74955 1 0.684 1 0.22869 1 0.84328 1 0.85087 1 1 1 0.22012 1 1 1 1 1 1 1 0.51947 1 NA NA 2q loss 7 (2%) 432 0.99712 1 0.6573 1 0.28571 1 1 1 1 1 0.59299 1 0.12627 1 0.6008 1 1 1 1 1 0.80142 1 NA NA 3p loss 52 (12%) 387 0.49291 1 0.41236 1 0.26027 1 0.14171 1 0.080499 1 0.1273 1 0.88378 1 0.27793 1 1 1 0.82334 1 0.09709 1 0.77863 1 3q loss 32 (7%) 407 0.4937 1 0.61479 1 0.6917 1 0.50131 1 0.84608 1 0.27956 1 0.46803 1 0.59997 1 1 1 0.86544 1 0.84431 1 0.4754 1 4p loss 129 (29%) 310 0.028005 1 0.7859 1 0.00192 1 0.31412 1 0.00304 1 0.00026 0.238 1 1 0.013141 1 0.024956 1 0.02669 1 0.00057332 0.518 0.88097 1 4q loss 117 (27%) 322 0.052937 1 0.76815 1 0.02745 1 0.29741 1 0.00313 1 0.03682 1 0.74589 1 0.081745 1 0.018575 1 0.55107 1 0.0010774 0.965 0.82909 1 5p loss 53 (12%) 386 0.13034 1 0.29168 1 0.00442 1 0.32932 1 0.01069 1 0.0455 1 0.88349 1 0.5189 1 0.039654 1 0.3857 1 0.011985 1 0.54459 1 5q loss 74 (17%) 365 0.022435 1 0.16296 1 0.01892 1 0.55484 1 3e-04 0.274 0.02175 1 0.25055 1 0.35056 1 0.075025 1 0.6463 1 6.3959e-05 0.0592 0.32975 1 6p loss 33 (8%) 406 0.0056169 1 0.1924 1 0.74965 1 0.11552 1 0.71974 1 0.30534 1 0.37139 1 0.79047 1 1 1 0.11385 1 0.9465 1 0.04799 1 6q loss 45 (10%) 394 0.011169 1 0.80986 1 0.67413 1 0.22775 1 0.11246 1 0.067959 1 0.53063 1 0.64687 1 1 1 0.17358 1 0.0068615 1 0.01918 1 8p loss 137 (31%) 302 0.78068 1 0.42324 1 0.0135 1 0.21428 1 0.00107 0.961 0.00376 1 0.25804 1 0.068851 1 1 1 0.058079 1 0.00043585 0.395 0.34826 1 8q loss 23 (5%) 416 0.96288 1 0.95737 1 0.01684 1 0.058609 1 0.01671 1 0.03247 1 0.52186 1 0.53337 1 1 1 0.7883 1 0.608 1 0.03667 1 9p loss 51 (12%) 388 0.83056 1 0.22938 1 0.94496 1 0.077039 1 0.26182 1 0.50792 1 0.23689 1 0.029524 1 1 1 0.49258 1 0.095388 1 0.75023 1 9q loss 51 (12%) 388 0.8549 1 0.039805 1 0.6415 1 0.13044 1 0.10288 1 0.17586 1 0.76792 1 0.044859 1 1 1 0.49495 1 0.072892 1 0.71838 1 10p loss 67 (15%) 372 0.97363 1 0.19133 1 0.03581 1 0.94688 1 0.071739 1 0.061139 1 0.79056 1 0.33032 1 0.062151 1 0.55338 1 0.031112 1 0.58206 1 10q loss 71 (16%) 368 0.69801 1 0.12718 1 0.14626 1 0.908 1 0.18655 1 0.1505 1 0.69915 1 0.25314 1 0.06938 1 0.24941 1 0.12241 1 0.69258 1 11p loss 50 (11%) 389 0.29437 1 0.47144 1 0.4191 1 0.77552 1 0.065579 1 0.04443 1 0.88159 1 0.82907 1 1 1 0.44818 1 0.0093559 1 0.58606 1 11q loss 61 (14%) 378 0.2418 1 0.48924 1 0.22447 1 0.18357 1 0.060799 1 0.03362 1 0.58152 1 1 1 1 1 0.41743 1 0.031078 1 0.40407 1 12p loss 46 (10%) 393 0.23197 1 0.32908 1 0.39513 1 0.45428 1 0.083719 1 0.26087 1 1 1 0.011748 1 0.28314 1 0.90438 1 0.038178 1 0.93788 1 12q loss 48 (11%) 391 0.38104 1 0.45285 1 0.15177 1 0.48624 1 0.03403 1 0.28096 1 0.75975 1 0.044217 1 1 1 0.86995 1 0.013448 1 0.49981 1 13q loss 12 (3%) 427 0.2689 1 0.99538 1 0.77628 1 0.47829 1 0.090229 1 0.27906 1 0.77579 1 0.17503 1 1 1 0.81991 1 0.013096 1 0.01848 1 14q loss 133 (30%) 306 0.59564 1 0.3426 1 0.20747 1 0.33071 1 0.14386 1 0.01897 1 1 1 6.0461e-06 0.00562 0.55683 1 0.6375 1 0.17282 1 0.92741 1 15q loss 150 (34%) 289 0.38377 1 0.40634 1 0.03137 1 0.61616 1 0.03346 1 0.00453 1 0.76278 1 0.018133 1 0.039366 1 0.38184 1 0.024038 1 0.052789 1 16p loss 30 (7%) 409 0.09684 1 0.074315 1 0.39208 1 0.53977 1 0.54293 1 0.16277 1 0.57086 1 0.27122 1 1 1 0.18146 1 0.43978 1 0.25141 1 16q loss 27 (6%) 412 0.17529 1 0.023201 1 0.56286 1 0.75102 1 0.70193 1 0.11048 1 0.69234 1 0.39 1 1 1 0.26618 1 0.61295 1 0.22964 1 17p loss 230 (52%) 209 0.099009 1 0.053356 1 6.9999e-05 0.0647 0.64491 1 9.9999e-05 0.092 0.00419 1 0.055455 1 9.9934e-06 0.00926 0.25001 1 0.03717 1 8.5569e-06 0.00794 0.83337 1 17q loss 65 (15%) 374 0.082988 1 0.82306 1 0.14886 1 0.374 1 0.0213 1 0.02152 1 0.89355 1 1 1 1 1 0.72634 1 0.00052718 0.477 0.13495 1 18p loss 247 (56%) 192 0.93655 1 0.01631 1 0.00044 0.399 0.93661 1 0.00451 1 0.00037 0.336 0.44078 1 2.2902e-09 2.14e-06 0.26009 1 0.02699 1 0.0012735 1 0.95079 1 18q loss 264 (60%) 175 0.87086 1 0.010766 1 6.9999e-05 0.0647 0.85139 1 0.00013 0.119 0.0015 1 0.32889 1 7.483e-09 6.97e-06 0.27918 1 0.10697 1 0.00011409 0.105 0.90794 1 19p loss 39 (9%) 400 0.047883 1 0.2222 1 0.01802 1 1 1 0.00294 1 0.00386 1 0.86778 1 0.32684 1 0.24405 1 0.28605 1 7.3142e-05 0.0674 0.73975 1 19q loss 36 (8%) 403 0.083609 1 0.49166 1 0.04505 1 1 1 0.0067699 1 0.00435 1 0.73113 1 0.44911 1 0.22686 1 0.26945 1 0.00039597 0.36 0.089189 1 20p loss 43 (10%) 396 0.66503 1 0.59007 1 0.55286 1 0.92811 1 0.44919 1 0.76225 1 0.63103 1 0.8182 1 1 1 1 1 0.70935 1 0.80206 1 20q loss 4 (1%) 435 0.24251 1 0.24696 1 0.46401 1 0.77608 1 0.12696 1 1 1 1 1 1 1 1 1 1 1 0.1604 1 NA NA 21q loss 120 (27%) 319 0.82573 1 0.96648 1 0.54412 1 0.48772 1 0.03055 1 0.14678 1 0.83022 1 0.011407 1 1 1 0.78433 1 0.019479 1 0.4036 1 22q loss 139 (32%) 300 0.067083 1 0.58123 1 0.0017 1 0.44272 1 0.00032 0.292 0.0072599 1 0.91855 1 0.002606 1 1 1 0.41366 1 0.00019072 0.175 0.52166 1 xq loss 50 (11%) 389 0.53597 1 0.73892 1 0.15563 1 0.25825 1 0.02277 1 0.03923 1 0.45604 1 1 1 1 1 0.46735 1 0.0037464 1 0.8163 1