name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A6-2672-01A-01W-0833-10	600	600	0	419	0	0	coding only	34834024	179	411	5.138654e-06	1.179881e-05
TCGA-A6-2674-01A-02W-0831-10	31	31	0	22	0	0	coding only	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-A6-2676-01A-01W-0833-10	839	839	0	604	0	0	coding only	34834024	233	594	6.688863e-06	1.705229e-05
TCGA-A6-2677-01A-01W-0831-10	78	78	0	57	0	0	coding only	34834024	21	57	6.028589e-07	1.636331e-06
TCGA-A6-2678-01A-01W-0831-10	69	69	0	62	0	0	coding only	34834024	7	61	2.009530e-07	1.751161e-06
TCGA-A6-2683-01A-01W-0831-10	107	107	0	74	0	0	coding only	34834024	32	74	9.186421e-07	2.124360e-06
TCGA-A6-3807-01A-01W-0995-10	100	100	0	81	0	0	coding only	34834024	19	81	5.454437e-07	2.325313e-06
TCGA-A6-3808-01A-01W-0995-10	124	124	0	101	0	0	coding only	34834024	22	101	6.315664e-07	2.899464e-06
TCGA-A6-3810-01A-01W-0995-10	125	125	0	98	0	0	coding only	34834024	27	96	7.751042e-07	2.755926e-06
TCGA-AA-3514-01A-02W-0831-10	99	99	0	81	0	0	coding only	34834024	17	80	4.880286e-07	2.296605e-06
TCGA-AA-3516-01A-02W-0833-10	932	932	0	692	0	0	coding only	34834024	239	681	6.861108e-06	1.954985e-05
TCGA-AA-3517-01A-01W-0831-10	38	38	0	28	0	0	coding only	34834024	10	28	2.870756e-07	8.038118e-07
TCGA-AA-3518-01A-02W-0833-10	591	591	0	430	0	0	coding only	34834024	156	423	4.478380e-06	1.214330e-05
TCGA-AA-3519-01A-02W-0831-10	54	54	0	37	0	0	coding only	34834024	17	37	4.880286e-07	1.062180e-06
TCGA-AA-3520-01A-01W-0831-10	68	68	0	54	0	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-AA-3521-01A-01W-0831-10	55	55	0	43	0	0	coding only	34834024	12	43	3.444908e-07	1.234425e-06
TCGA-AA-3522-01A-01W-0831-10	60	60	0	43	0	0	coding only	34834024	17	43	4.880286e-07	1.234425e-06
TCGA-AA-3524-01A-02W-0831-10	52	52	0	38	0	0	coding only	34834024	14	37	4.019059e-07	1.062180e-06
TCGA-AA-3525-01A-02W-0833-10	629	629	0	469	0	0	coding only	34834024	158	464	4.535795e-06	1.332031e-05
TCGA-AA-3526-01A-02W-0831-10	68	68	0	47	0	0	coding only	34834024	21	46	6.028589e-07	1.320548e-06
TCGA-AA-3527-01A-01W-0831-10	107	107	0	81	0	0	coding only	34834024	26	80	7.463967e-07	2.296605e-06
TCGA-AA-3529-01A-02W-0831-10	63	63	0	44	0	0	coding only	34834024	19	44	5.454437e-07	1.263133e-06
TCGA-AA-3530-01A-01W-0995-10	94	94	0	75	0	0	coding only	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-AA-3531-01A-01W-0831-10	74	74	0	57	0	0	coding only	34834024	17	57	4.880286e-07	1.636331e-06
TCGA-AA-3532-01A-01W-0831-10	47	47	0	34	0	0	coding only	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-AA-3534-01A-01W-0831-10	65	65	0	52	0	0	coding only	34834024	13	51	3.731983e-07	1.464086e-06
TCGA-AA-3538-01A-01W-0831-10	46	46	0	32	0	0	coding only	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-AA-3542-01A-02W-0831-10	413	413	0	327	0	0	coding only	34834024	83	324	2.382728e-06	9.301251e-06
TCGA-AA-3543-01A-01W-0833-10	240	240	0	195	0	0	coding only	34834024	44	191	1.263133e-06	5.483145e-06
TCGA-AA-3544-01A-01W-0831-10	66	66	0	45	0	0	coding only	34834024	21	45	6.028589e-07	1.291840e-06
TCGA-AA-3548-01A-01W-0831-10	40	40	0	30	0	0	coding only	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-AA-3549-01A-02W-0831-10	78	78	0	64	0	0	coding only	34834024	14	63	4.019059e-07	1.808577e-06
TCGA-AA-3552-01A-01W-0831-10	61	61	0	44	0	0	coding only	34834024	17	44	4.880286e-07	1.263133e-06
TCGA-AA-3553-01A-01W-0831-10	36	36	0	29	0	0	coding only	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-AA-3554-01A-01W-0833-10	335	335	0	243	0	0	coding only	34834024	91	243	2.612388e-06	6.975938e-06
TCGA-AA-3555-01A-01W-0831-10	907	907	0	739	0	0	coding only	34834024	165	730	4.736748e-06	2.095652e-05
TCGA-AA-3556-01A-01W-0831-10	44	44	0	28	0	0	coding only	34834024	16	28	4.593210e-07	8.038118e-07
TCGA-AA-3558-01A-01W-0831-10	139	139	0	95	0	0	coding only	34834024	44	92	1.263133e-06	2.641096e-06
TCGA-AA-3560-01A-01W-0831-10	62	62	0	49	0	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-AA-3561-01A-01W-0831-10	61	61	0	37	0	0	coding only	34834024	24	37	6.889816e-07	1.062180e-06
TCGA-AA-3562-01A-02W-0831-10	50	50	0	33	0	0	coding only	34834024	17	33	4.880286e-07	9.473496e-07
TCGA-AA-3664-01A-01W-0900-09	170	170	0	129	0	0	coding only	34834024	41	128	1.177010e-06	3.674568e-06
TCGA-AA-3666-01A-02W-0900-09	159	159	0	132	0	0	coding only	34834024	27	131	7.751042e-07	3.760691e-06
TCGA-AA-3667-01A-01W-0900-09	75	75	0	61	0	0	coding only	34834024	14	61	4.019059e-07	1.751161e-06
TCGA-AA-3672-01A-01W-0900-09	1844	1843	1	1382	5.422993e-04	0	coding only	34834024	460	1376	1.320548e-05	3.950161e-05
TCGA-AA-3673-01A-01W-0900-09	86	86	0	67	0	0	coding only	34834024	19	65	5.454437e-07	1.865992e-06
TCGA-AA-3678-01A-01W-0900-09	80	80	0	62	0	0	coding only	34834024	18	62	5.167362e-07	1.779869e-06
TCGA-AA-3679-01A-02W-0900-09	82	82	0	60	0	0	coding only	34834024	22	59	6.315664e-07	1.693746e-06
TCGA-AA-3680-01A-01W-0900-09	122	122	0	95	0	0	coding only	34834024	27	93	7.751042e-07	2.669804e-06
TCGA-AA-3681-01A-01W-0900-09	127	127	0	100	0	0	coding only	34834024	27	99	7.751042e-07	2.842049e-06
TCGA-AA-3684-01A-02W-0900-09	129	129	0	96	0	0	coding only	34834024	33	96	9.473496e-07	2.755926e-06
TCGA-AA-3685-01A-02W-0900-09	82	82	0	68	0	0	coding only	34834024	14	67	4.019059e-07	1.923407e-06
TCGA-AA-3688-01A-01W-0900-09	66	66	0	53	0	0	coding only	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-AA-3692-01A-01W-0900-09	68	68	0	56	0	0	coding only	34834024	12	56	3.444908e-07	1.607624e-06
TCGA-AA-3693-01A-01W-0900-09	147	147	0	112	0	0	coding only	34834024	35	110	1.004765e-06	3.157832e-06
TCGA-AA-3695-01A-01W-0900-09	182	182	0	137	0	0	coding only	34834024	45	136	1.291840e-06	3.904229e-06
TCGA-AA-3696-01A-01W-0900-09	102	102	0	78	0	0	coding only	34834024	24	77	6.889816e-07	2.210482e-06
TCGA-AA-3710-01A-01W-0995-10	1357	1357	0	979	0	0	coding only	34834024	377	970	1.082275e-05	2.784634e-05
TCGA-AA-3715-01A-01W-0900-09	2011	2011	0	1511	0	0	coding only	34834024	496	1489	1.423895e-05	4.274556e-05
TCGA-AA-3811-01A-01W-0995-10	1170	1170	0	870	0	0	coding only	34834024	294	856	8.440024e-06	2.457368e-05
TCGA-AA-3812-01A-01W-0900-09	116	116	0	82	0	0	coding only	34834024	34	82	9.760572e-07	2.354020e-06
TCGA-AA-3814-01A-01W-0900-09	113	112	1	78	8.849558e-03	0	coding only	34834024	34	77	9.760572e-07	2.210482e-06
TCGA-AA-3818-01A-01W-0900-09	141	141	0	102	0	0	coding only	34834024	39	102	1.119595e-06	2.928172e-06
TCGA-AA-3819-01A-01W-0900-09	179	179	0	139	0	0	coding only	34834024	39	138	1.119595e-06	3.961644e-06
TCGA-AA-3821-01A-01W-0995-10	840	840	0	646	0	0	coding only	34834024	191	643	5.483145e-06	1.845896e-05
TCGA-AA-3831-01A-01W-0900-09	117	117	0	96	0	0	coding only	34834024	21	96	6.028589e-07	2.755926e-06
TCGA-AA-3833-01A-01W-0900-09	549	549	0	385	0	0	coding only	34834024	163	383	4.679333e-06	1.099500e-05
TCGA-AA-3837-01A-01W-0900-09	155	155	0	109	0	0	coding only	34834024	46	108	1.320548e-06	3.100417e-06
TCGA-AA-3842-01A-01W-0995-10	91	91	0	63	0	0	coding only	34834024	28	63	8.038118e-07	1.808577e-06
TCGA-AA-3844-01A-01W-0995-10	122	122	0	90	0	0	coding only	34834024	32	89	9.186421e-07	2.554973e-06
TCGA-AA-3845-01A-01W-0995-10	904	904	0	669	0	0	coding only	34834024	233	663	6.688863e-06	1.903312e-05
TCGA-AA-3846-01A-01W-0995-10	103	102	1	76	9.708738e-03	0	coding only	34834024	26	76	7.463967e-07	2.181775e-06
TCGA-AA-3848-01A-01W-0900-09	156	156	0	108	0	0	coding only	34834024	48	108	1.377963e-06	3.100417e-06
TCGA-AA-3850-01A-01W-0995-10	116	116	0	81	0	0	coding only	34834024	34	80	9.760572e-07	2.296605e-06
TCGA-AA-3851-01A-01W-0995-10	102	102	0	75	0	0	coding only	34834024	27	75	7.751042e-07	2.153067e-06
TCGA-AA-3852-01A-01W-0900-09	146	146	0	112	0	0	coding only	34834024	32	112	9.186421e-07	3.215247e-06
TCGA-AA-3854-01A-01W-0900-09	150	150	0	111	0	0	coding only	34834024	39	110	1.119595e-06	3.157832e-06
TCGA-AA-3855-01A-01W-0995-10	149	149	0	111	0	0	coding only	34834024	38	110	1.090887e-06	3.157832e-06
TCGA-AA-3856-01A-01W-0900-09	68	68	0	51	0	0	coding only	34834024	17	50	4.880286e-07	1.435378e-06
TCGA-AA-3858-01A-01W-0900-09	69	69	0	50	0	0	coding only	34834024	19	49	5.454437e-07	1.406671e-06
TCGA-AA-3860-01A-02W-0900-09	51	51	0	37	0	0	coding only	34834024	14	37	4.019059e-07	1.062180e-06
TCGA-AA-3864-01A-01W-0995-10	2776	2775	1	1976	3.602305e-04	0	coding only	34834024	791	1963	2.270768e-05	5.635295e-05
TCGA-AA-3866-01A-01W-0995-10	138	138	0	98	0	0	coding only	34834024	40	97	1.148303e-06	2.784634e-06
TCGA-AA-3867-01A-01W-0995-10	104	104	0	86	0	0	coding only	34834024	18	86	5.167362e-07	2.468851e-06
TCGA-AA-3869-01A-01W-0995-10	97	97	0	70	0	0	coding only	34834024	24	70	6.889816e-07	2.009530e-06
TCGA-AA-3870-01A-01W-0995-10	131	131	0	98	0	0	coding only	34834024	33	98	9.473496e-07	2.813341e-06
TCGA-AA-3872-01A-01W-0995-10	72	72	0	50	0	0	coding only	34834024	22	50	6.315664e-07	1.435378e-06
TCGA-AA-3875-01A-01W-0900-09	129	129	0	103	0	0	coding only	34834024	26	102	7.463967e-07	2.928172e-06
TCGA-AA-3877-01A-01W-0995-10	1118	1118	0	783	0	0	coding only	34834024	334	778	9.588327e-06	2.233449e-05
TCGA-AA-3930-01A-01W-0995-10	176	176	0	123	0	0	coding only	34834024	53	122	1.521501e-06	3.502323e-06
TCGA-AA-3939-01A-01W-0995-10	138	138	0	113	0	0	coding only	34834024	24	113	6.889816e-07	3.243955e-06
TCGA-AA-3941-01A-01W-0995-10	121	121	0	100	0	0	coding only	34834024	21	100	6.028589e-07	2.870756e-06
TCGA-AA-3947-01A-01W-0995-10	1760	1760	0	1315	0	0	coding only	34834024	439	1297	1.260262e-05	3.723371e-05
TCGA-AA-3949-01A-01W-0995-10	950	950	0	690	0	0	coding only	34834024	260	683	7.463967e-06	1.960727e-05
TCGA-AA-3952-01A-01W-0995-10	101	101	0	77	0	0	coding only	34834024	24	75	6.889816e-07	2.153067e-06
TCGA-AA-3955-01A-02W-0995-10	129	129	0	101	0	0	coding only	34834024	28	100	8.038118e-07	2.870756e-06
TCGA-AA-3956-01A-02W-0995-10	146	146	0	118	0	0	coding only	34834024	28	118	8.038118e-07	3.387493e-06
TCGA-AA-3966-01A-01W-1073-09	1197	1197	0	915	0	0	coding only	34834024	282	905	8.095533e-06	2.598035e-05
TCGA-AA-3971-01A-01W-0995-10	94	94	0	76	0	0	coding only	34834024	18	75	5.167362e-07	2.153067e-06
TCGA-AA-3972-01A-01W-0995-10	120	120	0	83	0	0	coding only	34834024	37	83	1.062180e-06	2.382728e-06
TCGA-AA-3973-01A-01W-0995-10	87	87	0	69	0	0	coding only	34834024	18	69	5.167362e-07	1.980822e-06
TCGA-AA-3975-01A-01W-0995-10	132	132	0	106	0	0	coding only	34834024	26	106	7.463967e-07	3.043002e-06
TCGA-AA-3976-01A-01W-0995-10	101	101	0	73	0	0	coding only	34834024	27	73	7.751042e-07	2.095652e-06
TCGA-AA-3977-01A-01W-0995-10	3695	3692	3	2971	8.119080e-04	0	coding only	34834024	715	2954	2.052591e-05	8.480215e-05
TCGA-AA-3979-01A-01W-0995-10	165	165	0	131	0	0	coding only	34834024	34	128	9.760572e-07	3.674568e-06
TCGA-AA-3980-01A-02W-0995-10	108	108	0	94	0	0	coding only	34834024	14	92	4.019059e-07	2.641096e-06
TCGA-AA-3982-01A-02W-0995-10	114	114	0	90	0	0	coding only	34834024	24	90	6.889816e-07	2.583681e-06
TCGA-AA-3984-01A-02W-0995-10	4113	4110	3	3263	7.293946e-04	0	coding only	34834024	840	3248	2.411435e-05	9.324217e-05
TCGA-AA-3986-01A-02W-0995-10	90	90	0	62	0	0	coding only	34834024	28	61	8.038118e-07	1.751161e-06
TCGA-AA-3989-01A-01W-0995-10	136	136	0	107	0	0	coding only	34834024	29	103	8.325194e-07	2.956879e-06
TCGA-AA-3994-01A-01W-1073-09	201	201	0	149	0	0	coding only	34834024	52	146	1.492793e-06	4.191304e-06
TCGA-AA-A004-01A-01W-A00E-09	73	73	0	58	0	0	coding only	34834024	15	58	4.306135e-07	1.665039e-06
TCGA-AA-A00A-01A-01W-A005-10	457	457	0	338	0	0	coding only	34834024	117	329	3.358785e-06	9.444789e-06
TCGA-AA-A00D-01A-01W-A005-10	79	79	0	55	0	0	coding only	34834024	22	53	6.315664e-07	1.521501e-06
TCGA-AA-A00E-01A-01W-A005-10	657	657	0	472	0	0	coding only	34834024	179	467	5.138654e-06	1.340643e-05
TCGA-AA-A00F-01A-01W-A005-10	46	46	0	32	0	0	coding only	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-AA-A00J-01A-02W-A005-10	1173	1173	0	869	0	0	coding only	34834024	301	860	8.640977e-06	2.468851e-05
TCGA-AA-A00K-01A-02W-A005-10	195	195	0	140	0	0	coding only	34834024	55	137	1.578916e-06	3.932936e-06
TCGA-AA-A00L-01A-01W-A005-10	58	58	0	47	0	0	coding only	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-AA-A00N-01A-02W-A00E-09	4709	4708	1	3730	2.123593e-04	0	coding only	34834024	975	3706	2.798988e-05	1.063902e-04
TCGA-AA-A00O-01A-02W-A00E-09	94	94	0	72	0	0	coding only	34834024	21	70	6.028589e-07	2.009530e-06
TCGA-AA-A00Q-01A-01W-A005-10	38	38	0	24	0	0	coding only	34834024	14	24	4.019059e-07	6.889816e-07
TCGA-AA-A00R-01A-01W-A005-10	436	436	0	301	0	0	coding only	34834024	134	295	3.846814e-06	8.468732e-06
TCGA-AA-A00U-01A-01W-A005-10	92	92	0	67	0	0	coding only	34834024	25	66	7.176891e-07	1.894699e-06
TCGA-AA-A00W-01A-01W-A005-10	30	30	0	24	0	0	coding only	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-AA-A00Z-01A-01W-A005-10	45	45	0	30	0	0	coding only	34834024	15	29	4.306135e-07	8.325194e-07
TCGA-AA-A010-01A-01W-A00E-09	8704	7741	963	6153	1.106388e-01	1	exome+100bp flanks	34834024	1577	6110	4.527183e-05	1.754032e-04
TCGA-AA-A017-01A-01W-A00E-09	68	68	0	53	0	0	coding only	34834024	15	53	4.306135e-07	1.521501e-06
TCGA-AA-A01D-01A-01W-A00E-09	196	196	0	153	0	0	coding only	34834024	41	153	1.177010e-06	4.392257e-06
TCGA-AA-A01F-01A-01W-A005-10	61	61	0	48	0	0	coding only	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-AA-A01G-01A-01W-A005-10	75	75	0	50	0	0	coding only	34834024	24	49	6.889816e-07	1.406671e-06
TCGA-AA-A01I-01A-02W-A00E-09	104	104	0	88	0	0	coding only	34834024	16	87	4.593210e-07	2.497558e-06
TCGA-AA-A01K-01A-01W-A00E-09	188	188	0	147	0	0	coding only	34834024	40	147	1.148303e-06	4.220012e-06
TCGA-AA-A01P-01A-21W-A096-10	519	519	0	386	0	0	coding only	34834024	133	382	3.818106e-06	1.096629e-05
TCGA-AA-A01Q-01A-01W-A005-10	800	800	0	599	0	0	coding only	34834024	199	588	5.712805e-06	1.688005e-05
TCGA-AA-A01R-01A-21W-A096-10	1744	1743	1	1242	5.733945e-04	0	coding only	34834024	498	1228	1.429637e-05	3.525289e-05
TCGA-AA-A01S-01A-21W-A096-10	65	65	0	46	0	0	coding only	34834024	19	46	5.454437e-07	1.320548e-06
TCGA-AA-A01T-01A-21W-A096-10	99	99	0	80	0	0	coding only	34834024	19	80	5.454437e-07	2.296605e-06
TCGA-AA-A01V-01A-23W-A096-10	139	139	0	98	0	0	coding only	34834024	40	98	1.148303e-06	2.813341e-06
TCGA-AA-A01X-01A-21W-A096-10	67	67	0	48	0	0	coding only	34834024	18	47	5.167362e-07	1.349256e-06
TCGA-AA-A01Z-01A-11W-A096-10	109	109	0	80	0	0	coding only	34834024	29	79	8.325194e-07	2.267898e-06
TCGA-AA-A022-01A-21W-A096-10	1291	1290	1	919	7.745933e-04	0	coding only	34834024	369	908	1.059309e-05	2.606647e-05
TCGA-AA-A024-01A-02W-A00E-09	89	89	0	65	0	0	coding only	34834024	24	65	6.889816e-07	1.865992e-06
TCGA-AA-A029-01A-01W-A00E-09	120	120	0	91	0	0	coding only	34834024	29	89	8.325194e-07	2.554973e-06
TCGA-AA-A02F-01A-01W-A00E-09	67	67	0	49	0	0	coding only	34834024	18	49	5.167362e-07	1.406671e-06
TCGA-AA-A02H-01A-01W-A00E-09	82	82	0	63	0	0	coding only	34834024	18	63	5.167362e-07	1.808577e-06
TCGA-AA-A02J-01A-01W-A00E-09	152	152	0	119	0	0	coding only	34834024	33	117	9.473496e-07	3.358785e-06
TCGA-AA-A02O-01A-21W-A096-10	167	167	0	138	0	0	coding only	34834024	29	137	8.325194e-07	3.932936e-06
TCGA-AA-A02W-01A-01W-A00E-09	141	141	0	110	0	0	coding only	34834024	31	109	8.899345e-07	3.129125e-06
TCGA-AA-A02Y-01A-43W-A096-10	126	126	0	106	0	0	coding only	34834024	20	104	5.741513e-07	2.985587e-06
TCGA-AA-A03F-01A-11W-A096-10	135	135	0	105	0	0	coding only	34834024	30	105	8.612269e-07	3.014294e-06
TCGA-AA-A03J-01A-21W-A096-10	96	96	0	66	0	0	coding only	34834024	30	66	8.612269e-07	1.894699e-06
TCGA-AF-2689-01A-01W-0831-10	64	64	0	45	0	0	coding only	34834024	19	45	5.454437e-07	1.291840e-06
TCGA-AF-2691-01A-01W-0831-10	73	73	0	58	0	0	coding only	34834024	15	58	4.306135e-07	1.665039e-06
TCGA-AF-2692-01A-01W-0831-10	45	45	0	35	0	0	coding only	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-AF-3400-01A-01W-0831-10	33	33	0	20	0	0	coding only	34834024	13	20	3.731983e-07	5.741513e-07
TCGA-AF-3913-01	118	118	0	88	0	0	coding only	34834024	30	88	8.612269e-07	2.526266e-06
TCGA-AG-3574-01A-01W-0831-10	44	44	0	32	0	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-AG-3575-01A-01W-0831-10	51	51	0	43	0	0	coding only	34834024	8	43	2.296605e-07	1.234425e-06
TCGA-AG-3578-01A-01W-0831-10	29	29	0	26	0	0	coding only	34834024	3	26	8.612269e-08	7.463967e-07
TCGA-AG-3580-01A-01W-0831-10	44	44	0	32	0	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-AG-3581-01A-01W-0831-10	54	54	0	37	0	0	coding only	34834024	17	36	4.880286e-07	1.033472e-06
TCGA-AG-3582-01A-01W-0831-10	35	35	0	29	0	0	coding only	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-AG-3583-01A-01W-0831-10	67	67	0	52	0	0	coding only	34834024	14	52	4.019059e-07	1.492793e-06
TCGA-AG-3584-01A-01W-0831-10	35	35	0	30	0	0	coding only	34834024	5	30	1.435378e-07	8.612269e-07
TCGA-AG-3586-01A-02W-0831-10	83	83	0	48	0	0	coding only	34834024	35	48	1.004765e-06	1.377963e-06
TCGA-AG-3587-01A-01W-0831-10	69	69	0	52	0	0	coding only	34834024	17	50	4.880286e-07	1.435378e-06
TCGA-AG-3593-01A-01W-0831-10	78	78	0	60	0	0	coding only	34834024	18	60	5.167362e-07	1.722454e-06
TCGA-AG-3594-01A-02W-0831-10	46	46	0	32	0	0	coding only	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-AG-3598-01A-01W-0833-10	75	75	0	57	0	0	coding only	34834024	18	57	5.167362e-07	1.636331e-06
TCGA-AG-3599-01A-02W-0833-10	67	67	0	53	0	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-AG-3600-01A-01W-0833-10	97	97	0	77	0	0	coding only	34834024	19	76	5.454437e-07	2.181775e-06
TCGA-AG-3601-01A-01W-0833-10	107	107	0	77	0	0	coding only	34834024	30	77	8.612269e-07	2.210482e-06
TCGA-AG-3602-01A-02W-0833-10	49	49	0	35	0	0	coding only	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-AG-3605-01A-01W-0833-10	68	68	0	47	0	0	coding only	34834024	21	47	6.028589e-07	1.349256e-06
TCGA-AG-3608-01A-01W-0833-10	61	61	0	45	0	0	coding only	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-AG-3609-01A-02W-0833-10	97	97	0	66	0	0	coding only	34834024	30	66	8.612269e-07	1.894699e-06
TCGA-AG-3611-01A-01W-0833-10	54	54	0	40	0	0	coding only	34834024	14	40	4.019059e-07	1.148303e-06
TCGA-AG-3612-01A-01W-0833-10	73	73	0	52	0	0	coding only	34834024	20	52	5.741513e-07	1.492793e-06
TCGA-AG-3726-01	158	158	0	131	0	0	coding only	34834024	27	131	7.751042e-07	3.760691e-06
TCGA-AG-3727-01	85	85	0	70	0	0	coding only	34834024	15	70	4.306135e-07	2.009530e-06
TCGA-AG-3878-01	91	91	0	76	0	0	coding only	34834024	15	72	4.306135e-07	2.066945e-06
TCGA-AG-3881-01	102	102	0	77	0	0	coding only	34834024	25	76	7.176891e-07	2.181775e-06
TCGA-AG-3882-01	68	68	0	57	0	0	coding only	34834024	10	57	2.870756e-07	1.636331e-06
TCGA-AG-3883-01	133	133	0	99	0	0	coding only	34834024	34	99	9.760572e-07	2.842049e-06
TCGA-AG-3887-01	79	79	0	61	0	0	coding only	34834024	18	60	5.167362e-07	1.722454e-06
TCGA-AG-3890-01	82	82	0	65	0	0	coding only	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-AG-3892-01	2267	2267	0	1878	0	0	coding only	34834024	387	1869	1.110983e-05	5.365444e-05
TCGA-AG-3893-01	118	118	0	89	0	0	coding only	34834024	29	88	8.325194e-07	2.526266e-06
TCGA-AG-3894-01	106	106	0	81	0	0	coding only	34834024	25	79	7.176891e-07	2.267898e-06
TCGA-AG-3896-01	107	107	0	81	0	0	coding only	34834024	26	81	7.463967e-07	2.325313e-06
TCGA-AG-3898-01	111	111	0	80	0	0	coding only	34834024	31	80	8.899345e-07	2.296605e-06
TCGA-AG-3901-01	68	68	0	47	0	0	coding only	34834024	21	47	6.028589e-07	1.349256e-06
TCGA-AG-3902-01	136	136	0	103	0	0	coding only	34834024	33	103	9.473496e-07	2.956879e-06
TCGA-AG-3909-01	92	92	0	77	0	0	coding only	34834024	15	76	4.306135e-07	2.181775e-06
TCGA-AG-3999-01	110	110	0	87	0	0	coding only	34834024	23	86	6.602740e-07	2.468851e-06
TCGA-AG-4001-01	127	127	0	92	0	0	coding only	34834024	35	91	1.004765e-06	2.612388e-06
TCGA-AG-4005-01	127	127	0	86	0	0	coding only	34834024	40	86	1.148303e-06	2.468851e-06
TCGA-AG-4007-01	171	171	0	131	0	0	coding only	34834024	39	130	1.119595e-06	3.731983e-06
TCGA-AG-4008-01	81	81	0	64	0	0	coding only	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-AG-4015-01	104	104	0	83	0	0	coding only	34834024	21	83	6.028589e-07	2.382728e-06
TCGA-AG-A002-01	12543	12343	200	9863	1.594515e-02	0	coding only	34834024	2460	9800	7.062061e-05	2.813341e-04
TCGA-AG-A002-01A-01W-A005-10	7212	7212	0	5831	0	0	coding only	34834024	1366	5753	3.921453e-05	1.651546e-04
TCGA-AG-A008-01A-01W-A005-10	49	49	0	39	0	0	coding only	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-AG-A00C-01A-01W-A005-10	69	69	0	52	0	0	coding only	34834024	17	51	4.880286e-07	1.464086e-06
TCGA-AG-A00H-01	79	79	0	56	0	0	coding only	34834024	23	55	6.602740e-07	1.578916e-06
TCGA-AG-A00Y-01A-02W-A005-10	284	284	0	194	0	0	coding only	34834024	89	191	2.554973e-06	5.483145e-06
TCGA-AG-A011-01	115	115	0	92	0	0	coding only	34834024	23	91	6.602740e-07	2.612388e-06
TCGA-AG-A011-01A-01W-A005-10	41	41	0	36	0	0	coding only	34834024	5	36	1.435378e-07	1.033472e-06
TCGA-AG-A014-01	159	159	0	135	0	0	coding only	34834024	24	133	6.889816e-07	3.818106e-06
TCGA-AG-A014-01A-02W-A005-10	43	43	0	32	0	0	coding only	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-AG-A015-01A-01W-A005-10	64	64	0	52	0	0	coding only	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-AG-A016-01A-01W-A005-10	58	58	0	39	0	0	coding only	34834024	19	38	5.454437e-07	1.090887e-06
TCGA-AG-A01L-01	77	77	0	61	0	0	coding only	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-AG-A01L-01A-01W-A005-10	42	42	0	33	0	0	coding only	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-AG-A01W-01	127	127	0	97	0	0	coding only	34834024	30	97	8.612269e-07	2.784634e-06
TCGA-AG-A01Y-01	95	95	0	67	0	0	coding only	34834024	28	67	8.038118e-07	1.923407e-06
TCGA-AG-A020-01	81	81	0	61	0	0	coding only	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-AG-A025-01	100	100	0	74	0	0	coding only	34834024	26	74	7.463967e-07	2.124360e-06
TCGA-AG-A026-01	225	225	0	174	0	0	coding only	34834024	50	174	1.435378e-06	4.995116e-06
TCGA-AG-A02G-01	61	61	0	47	0	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-AG-A02N-01	1251	1251	0	918	0	0	coding only	34834024	329	913	9.444789e-06	2.621001e-05
TCGA-AG-A02X-01	154	154	0	110	0	0	coding only	34834024	43	110	1.234425e-06	3.157832e-06
TCGA-AG-A032-01	91	91	0	72	0	0	coding only	34834024	19	69	5.454437e-07	1.980822e-06
TCGA-AG-A036-01	154	154	0	114	0	0	coding only	34834024	40	114	1.148303e-06	3.272662e-06
TCGA-AY-4070-01A-01W-1073-09	145	145	0	109	0	0	coding only	34834024	36	108	1.033472e-06	3.100417e-06
TCGA-AY-4071-01A-01W-1073-09	115	115	0	84	0	0	coding only	34834024	30	84	8.612269e-07	2.411435e-06