Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
SETD2	44 (11%)	373	1	1	0.50061	1	0.44938	1	9.9999e-06	0.00257	0.66426	1	0.30339	1	0.46999	1	0.078779	1	0.40168	1	0.2362	1	0.54171	1	0.35831	1
BAP1	41 (10%)	376	0.03222	1	0.00043	0.106	0.01615	1	0.00015	0.0372	0.02104	1	0.02384	1	0.00014	0.0349	5.9999e-05	0.0151	3e-05	0.00759	9.9999e-06	0.00257	0.12765	1	0.35092	1
PTEN	18 (4%)	399	0.10576	1	0.0328	1	0.099029	1	0.16889	1	0.11871	1	0.30726	1	3e-05	0.00759	0.00043	0.106	0.00163	0.393	0.1139	1	0.073719	1	1	1
PBRM1	136 (33%)	281	0.14942	1	0.059519	1	0.04147	1	2e-05	0.00508	0.0013	0.315	0.98023	1	0.0065799	1	9.9999e-06	0.00257	0.00369	0.886	0.03088	1	0.00013	0.0325	0.088529	1
KDM5C	26 (6%)	391	NA	NA	NA	NA	0.27504	1	0.088249	1	0.338	1	0.11402	1	0.069079	1	0.10213	1	0.0104	1	0.04136	1	1	1	1	1
VHL	166 (40%)	251	0.11242	1	0.22642	1	0.42264	1	0.74814	1	0.1443	1	0.33297	1	0.0076999	1	0.050539	1	0.1587	1	0.13333	1	0.43674	1	0.73135	1
FAM200A	5 (1%)	412	NA	NA	NA	NA	0.71932	1	NA	NA	0.00088999	0.217	0.25359	1	0.14697	1	0.38936	1	0.2069	1	0.4163	1	NA	NA	NA	NA
TP53	9 (2%)	408	NA	NA	NA	NA	0.38162	1	0.51466	1	0.44524	1	0.42385	1	0.44598	1	0.17206	1	0.4662	1	0.51688	1	1	1	1	1
NEFH	5 (1%)	412	NA	NA	NA	NA	0.85814	1	0.54196	1	0.9775	1	0.17653	1	0.0098099	1	0.27176	1	0.62701	1	0.82993	1	0.44713	1	0.12048	1
CCDC120	4 (1%)	413	NA	NA	NA	NA	0.10743	1	NA	NA	0.4419	1	1	1	0.66779	1	0.48641	1	0.82563	1	1	1	NA	NA	NA	NA
MTOR	23 (6%)	394	NA	NA	NA	NA	0.72569	1	0.15355	1	0.00038	0.0939	0.00095999	0.233	0.91933	1	0.75887	1	0.25589	1	0.2463	1	0.87595	1	1	1
GUSB	4 (1%)	413	NA	NA	NA	NA	0.57033	1	NA	NA	0.31162	1	0.62676	1	0.17415	1	0.7022	1	0.45459	1	0.87467	1	NA	NA	NA	NA
PIK3CA	12 (3%)	405	NA	NA	NA	NA	0.5228	1	0.65325	1	0.79532	1	0.28352	1	0.35607	1	0.44949	1	0.75086	1	0.94465	1	NA	NA	NA	NA
PCK1	5 (1%)	412	NA	NA	NA	NA	0.45037	1	0.61988	1	1	1	0.81535	1	0.84968	1	0.45929	1	0.72861	1	0.38576	1	NA	NA	NA	NA
ARID1A	12 (3%)	405	NA	NA	NA	NA	0.52074	1	0.25893	1	0.90419	1	1	1	0.32768	1	0.25239	1	0.24676	1	0.0089199	1	0.38196	1	0.19271	1
ATM	11 (3%)	406	NA	NA	NA	NA	0.7282	1	0.47435	1	0.64019	1	1	1	0.29543	1	0.03061	1	0.11528	1	0.091009	1	NA	NA	NA	NA
DPCR1	6 (1%)	411	NA	NA	NA	NA	0.20526	1	0.51011	1	0.21574	1	1	1	0.22678	1	0.33471	1	0.87268	1	0.93142	1	NA	NA	NA	NA
FGFR3	4 (1%)	413	NA	NA	NA	NA	0.69233	1	0.84113	1	0.95574	1	1	1	0.81548	1	0.29234	1	0.82535	1	0.31571	1	NA	NA	NA	NA
PTCH1	7 (2%)	410	NA	NA	NA	NA	1	1	0.054779	1	0.40942	1	0.15722	1	0.8759	1	0.3319	1	0.89563	1	0.60851	1	NA	NA	NA	NA
RBMX	4 (1%)	413	NA	NA	NA	NA	0.69383	1	0.61844	1	0.10929	1	0.45672	1	0.40033	1	0.70118	1	0.33591	1	0.12583	1	NA	NA	NA	NA
ARAP3	3 (1%)	414	NA	NA	NA	NA	0.60204	1	NA	NA	1	1	1	1	0.77473	1	1	1	0.79549	1	0.83911	1	NA	NA	NA	NA
GPR172B	4 (1%)	413	NA	NA	NA	NA	1	1	NA	NA	0.12043	1	0.79598	1	0.52706	1	1	1	0.61013	1	1	1	NA	NA	NA	NA
EGFR	7 (2%)	410	NA	NA	NA	NA	0.69602	1	0.68176	1	0.7378	1	0.49559	1	0.61195	1	0.20974	1	1	1	0.094769	1	NA	NA	NA	NA
IL1RAP	4 (1%)	413	NA	NA	NA	NA	0.57108	1	0.61675	1	0.26028	1	0.091809	1	0.81626	1	0.48595	1	0.55757	1	0.63754	1	NA	NA	NA	NA
BCL6	5 (1%)	412	NA	NA	NA	NA	0.45013	1	0.61785	1	0.81181	1	0.73206	1	1	1	0.46138	1	0.7266	1	0.48377	1	NA	NA	NA	NA
NFAT5	6 (1%)	411	NA	NA	NA	NA	0.36718	1	0.8791	1	0.25426	1	0.53059	1	0.3384	1	0.56701	1	0.28151	1	0.095719	1	NA	NA	NA	NA
LARP1	5 (1%)	412	NA	NA	NA	NA	0.44925	1	0.44169	1	0.24087	1	0.52775	1	0.84735	1	1	1	0.6296	1	0.32106	1	NA	NA	NA	NA
KIAA1751	6 (1%)	411	NA	NA	NA	NA	0.57939	1	0.64093	1	0.61436	1	0.074709	1	0.32273	1	1	1	0.38618	1	0.32055	1	NA	NA	NA	NA
INSRR	4 (1%)	413	NA	NA	NA	NA	0.69499	1	0.12276	1	0.29764	1	0.38756	1	0.39727	1	0.38606	1	0.45464	1	0.78674	1	NA	NA	NA	NA