Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
IDH1	220 (76%)	69	0.27174	1	0.88723	1	9.9999e-06	0.00382	9.9999e-06	0.00382	9.9999e-06	0.00382	0.00233	0.736	9.9999e-06	0.00382	9.9999e-06	0.00382	0.0066099	1	9.9999e-06	0.00382	9.9999e-06	0.00382	9.9999e-06	0.00382
TP53	146 (51%)	143	0.062779	1	0.00459	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.02957	1	0.50003	1	9.9999e-06	0.00382	9.9999e-06	0.00382	3e-05	0.01	3e-05	0.01	0.00145	0.46	9.9999e-06	0.00382
ATRX	118 (41%)	171	0.01807	1	0.12634	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.16952	1	0.77844	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.00025	0.0815	2e-05	0.00678	0.03757	1	9.9999e-06	0.00382
CIC	54 (19%)	235	0.04336	1	0.00276	0.861	9.9999e-06	0.00382	9.9999e-06	0.00382	7.9999e-05	0.0265	0.49986	1	9.9999e-06	0.00382	9.9999e-06	0.00382	9.9999e-06	0.00382	2e-05	0.00678	2e-05	0.00678	9.9999e-06	0.00382
NOTCH1	29 (10%)	260	0.46339	1	0.24718	1	5e-04	0.162	9.9999e-06	0.00382	0.89193	1	0.85914	1	9.9999e-06	0.00382	4e-05	0.0133	8.9999e-05	0.0296	0.00055999	0.181	7.9999e-05	0.0265	0.00059999	0.193
IDH2	12 (4%)	277	NA	NA	NA	NA	0.01576	1	0.01499	1	0.51802	1	0.18403	1	0.00244	0.769	0.00137	0.436	0.1092	1	0.01916	1	0.00264	0.829	0.073719	1
FUBP1	26 (9%)	263	0.02463	1	0.0076999	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.01809	1	0.73752	1	9.9999e-06	0.00382	9.9999e-06	0.00382	5.9999e-05	0.0199	0.01039	1	0.51263	1	2e-04	0.0654
NF1	19 (7%)	270	NA	NA	NA	NA	0.066369	1	2e-05	0.00678	0.03108	1	0.2217	1	0.01899	1	0.0077299	1	0.84367	1	0.00273	0.854	0.16259	1	0.00012	0.0394
PIK3R1	13 (4%)	276	0.60306	1	0.58657	1	0.078819	1	0.03525	1	0.89275	1	1	1	0.70933	1	0.78641	1	0.20705	1	0.61666	1	1	1	0.72016	1
STK19	8 (3%)	281	NA	NA	NA	NA	0.47817	1	0.082839	1	0.0174	1	0.14219	1	0.61561	1	0.47682	1	0.38601	1	0.89899	1	0.27739	1	0.88022	1
PTEN	13 (4%)	276	NA	NA	NA	NA	9.9999e-06	0.00382	9.9999e-06	0.00382	0.00059999	0.193	0.0052499	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.03693	1	9.9999e-06	0.00382	0.00047	0.153	9.9999e-06	0.00382
PIK3CA	25 (9%)	264	NA	NA	NA	NA	0.00070999	0.227	9.9999e-06	0.00382	0.56755	1	0.73273	1	0.0054599	1	0.00071999	0.23	0.36785	1	0.27009	1	0.28669	1	0.04384	1
ARID1A	12 (4%)	277	NA	NA	NA	NA	0.72942	1	0.48119	1	0.45739	1	0.79556	1	0.1731	1	0.15579	1	0.71192	1	0.69297	1	0.1974	1	0.48556	1
EGFR	17 (6%)	272	NA	NA	NA	NA	9.9999e-06	0.00382	9.9999e-06	0.00382	0.0074799	1	0.02348	1	9.9999e-06	0.00382	9.9999e-06	0.00382	0.43655	1	9.9999e-06	0.00382	0.0060699	1	9.9999e-06	0.00382
GAGE2B	4 (1%)	285	NA	NA	NA	NA	0.68519	1	1	1	0.37728	1	1	1	0.72179	1	0.52548	1	1	1	0.83584	1	0.1747	1	0.32495	1
CREBZF	5 (2%)	284	NA	NA	NA	NA	0.17137	1	0.03633	1	0.085439	1	0.00441	1	0.57566	1	0.41121	1	0.37153	1	0.069099	1	0.11346	1	0.31513	1
TCF12	8 (3%)	281	NA	NA	NA	NA	0.59703	1	0.48451	1	0.19901	1	0.44848	1	0.24589	1	0.59037	1	0.34353	1	1	1	1	1	1	1
SMARCA4	13 (4%)	276	NA	NA	NA	NA	0.12877	1	0.19511	1	0.31501	1	0.84779	1	0.13898	1	0.56673	1	0.070449	1	0.11868	1	0.59355	1	0.26487	1
VAV3	8 (3%)	281	NA	NA	NA	NA	0.47871	1	0.50598	1	0.96156	1	0.56961	1	0.03918	1	0.47833	1	0.69853	1	0.42045	1	0.54453	1	0.3491	1
TMEM216	3 (1%)	286	NA	NA	NA	NA	0.3379	1	1	1	0.79375	1	0.79333	1	0.8951	1	0.88688	1	0.40434	1	0.59926	1	0.11786	1	0.3287	1
ROBO3	4 (1%)	285	NA	NA	NA	NA	0.68381	1	0.89135	1	NA	NA	NA	NA	0.64212	1	0.71963	1	0.60539	1	0.5391	1	1	1	1	1
IRS4	5 (2%)	284	NA	NA	NA	NA	0.21235	1	0.83742	1	1	1	0.19568	1	0.85776	1	0.93159	1	0.92474	1	1	1	0.090419	1	1	1
HTRA2	4 (1%)	285	NA	NA	NA	NA	0.12524	1	0.67432	1	0.41406	1	1	1	1	1	1	1	0.48843	1	0.83502	1	0.26914	1	0.87535	1
EIF1AX	4 (1%)	285	NA	NA	NA	NA	0.36405	1	0.31782	1	0.37596	1	0.26394	1	0.86803	1	0.84249	1	0.89458	1	0.25521	1	0.37203	1	0.076169	1
FAM47C	7 (2%)	282	NA	NA	NA	NA	0.38454	1	0.34353	1	0.24598	1	0.31501	1	0.059209	1	0.02906	1	0.142	1	0.03456	1	0.0053699	1	0.18923	1
PLCG1	4 (1%)	285	NA	NA	NA	NA	0.00331	1	0.0156	1	NA	NA	NA	NA	0.16542	1	0.66945	1	0.34804	1	0.19487	1	0.092299	1	0.25895	1
DDX5	4 (1%)	285	NA	NA	NA	NA	0.68331	1	1	1	1	1	0.44189	1	0.20458	1	0.13931	1	0.43863	1	0.41879	1	0.12885	1	0.75431	1
ZNF709	3 (1%)	286	NA	NA	NA	NA	0.79155	1	0.81755	1	0.88745	1	0.79506	1	0.067289	1	0.19352	1	0.86597	1	0.60314	1	0.78681	1	1	1
TRERF1	3 (1%)	286	NA	NA	NA	NA	0.051179	1	0.31357	1	0.4406	1	0.068459	1	0.19367	1	0.55491	1	0.86429	1	0.60104	1	0.6201	1	0.76942	1
BCOR	9 (3%)	280	1	1	0.86724	1	0.25478	1	0.78478	1	0.91614	1	0.88608	1	0.84713	1	0.39106	1	0.92643	1	0.82738	1	0.39387	1	0.12342	1
SRPX	3 (1%)	286	NA	NA	NA	NA	0.46939	1	0.21021	1	0.33701	1	1	1	0.17034	1	0.092469	1	0.19443	1	0.42004	1	0.48502	1	0.1184	1
DOCK5	6 (2%)	283	NA	NA	NA	NA	0.077589	1	0.089669	1	0.37397	1	0.22573	1	0.13404	1	0.072649	1	0.22359	1	0.17554	1	1	1	0.71621	1
GIGYF2	4 (1%)	285	NA	NA	NA	NA	0.03408	1	0.20834	1	0.083569	1	0.81263	1	0.54126	1	0.41073	1	0.22012	1	0.074779	1	1	1	0.25469	1
NIPBL	6 (2%)	283	NA	NA	NA	NA	0.575	1	0.082859	1	0.84092	1	0.80921	1	0.068559	1	0.04674	1	0.83159	1	0.50429	1	0.083779	1	0.4702	1
ZBTB20	13 (4%)	276	NA	NA	NA	NA	0.04116	1	0.0051299	1	0.6008	1	0.35564	1	0.074129	1	0.080679	1	0.45533	1	0.23884	1	0.11637	1	0.56287	1
TRIP12	5 (2%)	284	NA	NA	NA	NA	0.30749	1	0.52674	1	0.50014	1	0.28176	1	0.59995	1	0.57794	1	0.85567	1	0.72825	1	1	1	0.79982	1
KIAA0664	5 (2%)	284	NA	NA	NA	NA	0.72907	1	0.29745	1	0.67584	1	0.26039	1	0.64143	1	0.52136	1	0.27761	1	0.088959	1	0.37861	1	0.22033	1