Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	11 (3%)	419	0.0063666	1	0.041544	1	0.22653	1	0.9879	1	0.0066599	1	0.70444	1	1	1	1	1
1q gain	18 (4%)	412	0.37996	1	0.00073628	0.433	0.34196	1	0.10771	1	0.20359	1	0.55022	1	1	1	1	1
2p gain	11 (3%)	419	0.94446	1	0.10254	1	0.54754	1	0.26126	1	0.50171	1	1	1	1	1	0.33622	1
2q gain	10 (2%)	420	0.57955	1	0.23655	1	0.34819	1	0.26126	1	0.60901	1	1	1	1	1	0.30813	1
3p gain	11 (3%)	419	0.0015882	0.931	0.081882	1	0.54754	1	0.74792	1	0.02431	1	0.70444	1	1	1	1	1
3q gain	8 (2%)	422	0.00056275	0.333	0.031366	1	0.31031	1	0.2919	1	0.078579	1	0.37092	1	1	1	1	1
4p gain	11 (3%)	419	0.26895	1	0.8495	1	1	1	0.98609	1	0.02359	1	0.47279	1	0.43367	1	1	1
4q gain	4 (1%)	426	0.60364	1	0.73657	1	1	1	NA	NA	0.37725	1	0.58496	1	1	1	1	1
5p gain	8 (2%)	422	0.63365	1	0.2418	1	0.7363	1	0.91068	1	0.23274	1	1	1	0.12779	1	1	1
5q gain	5 (1%)	425	0.43119	1	0.58242	1	0.65865	1	0.9932	1	0.64847	1	0.58837	1	0.070349	1	1	1
6p gain	7 (2%)	423	0.80879	1	0.12013	1	0.24902	1	0.9932	1	0.20486	1	0.63789	1	1	1	1	1
7p gain	96 (22%)	334	9.6115e-06	0.00583	1.065e-06	0.000651	0.20148	1	0.17904	1	0.096469	1	0.5683	1	0.070289	1	0.76727	1
7q gain	127 (30%)	303	2.2744e-05	0.0137	2.8402e-07	0.000174	0.45643	1	0.45177	1	0.02232	1	0.6959	1	0.12804	1	1	1
8p gain	39 (9%)	391	0.72519	1	0.94383	1	0.50157	1	0.97574	1	0.12683	1	0.83605	1	1	1	1	1
8q gain	46 (11%)	384	0.65741	1	0.35348	1	0.53105	1	0.56273	1	0.01022	1	0.84813	1	0.84135	1	1	1
9p gain	14 (3%)	416	0.070359	1	0.011696	1	0.053079	1	0.47014	1	0.42401	1	1	1	1	1	1	1
9q gain	20 (5%)	410	0.06517	1	0.014921	1	0.0053037	1	0.40338	1	0.10473	1	0.77739	1	0.19675	1	0.56412	1
10p gain	44 (10%)	386	0.79848	1	0.061568	1	0.19965	1	0.18236	1	0.01173	1	0.0049646	1	0.71352	1	0.073365	1
10q gain	8 (2%)	422	0.78043	1	0.28996	1	0.47512	1	0.22093	1	0.078719	1	0.37092	1	0.04751	1	0.24856	1
11p gain	27 (6%)	403	0.49197	1	0.018104	1	0.23524	1	0.74657	1	0.0353	1	0.80825	1	0.74817	1	1	1
11q gain	49 (11%)	381	0.51462	1	0.018801	1	0.12615	1	0.68092	1	0.35951	1	1	1	0.85427	1	1	1
12p gain	27 (6%)	403	0.75081	1	0.59381	1	0.16032	1	0.61835	1	0.58708	1	0.80825	1	0.30531	1	1	1
12q gain	13 (3%)	417	0.0018153	1	0.186	1	0.40253	1	0.22132	1	1	1	1	1	0.2515	1	1	1
13q gain	6 (1%)	424	0.45909	1	0.92468	1	1	1	0.041004	1	0.88523	1	0.35263	1	1	1	1	1
14q gain	3 (1%)	427	0.40371	1	0.20274	1	1	1	NA	NA	1	1	0.11011	1	1	1	1	1
15q gain	8 (2%)	422	0.093898	1	0.0086745	1	0.47512	1	0.2928	1	0.23117	1	0.67225	1	1	1	1	1
16p gain	16 (4%)	414	0.37667	1	0.11158	1	0.44257	1	0.51797	1	0.11264	1	0.75226	1	0.54167	1	1	1
16q gain	18 (4%)	412	0.16203	1	0.78488	1	0.34196	1	0.85636	1	0.02264	1	0.55022	1	0.59027	1	1	1
17p gain	17 (4%)	413	0.069133	1	0.12466	1	0.31903	1	0.64539	1	0.12911	1	0.76166	1	0.31369	1	0.48358	1
17q gain	19 (4%)	411	0.01495	1	0.3048	1	0.34598	1	1	1	0.2481	1	1	1	0.33233	1	0.48358	1
18p gain	13 (3%)	417	0.058504	1	0.86021	1	0.78122	1	0.45434	1	0.24763	1	1	1	0.49012	1	1	1
18q gain	9 (2%)	421	0.12097	1	0.53545	1	0.73708	1	0.94715	1	0.43228	1	0.69244	1	0.37203	1	1	1
19p gain	84 (20%)	346	0.68384	1	0.011284	1	0.46487	1	0.10921	1	9.9999e-06	0.00606	0.76486	1	0.56691	1	0.52958	1
19q gain	20 (5%)	410	2.7559e-06	0.00168	0.00016437	0.098	0.81918	1	0.22899	1	0.13875	1	0.57944	1	0.1986	1	0.54517	1
20p gain	37 (9%)	393	8.0606e-08	4.96e-05	5.4097e-07	0.000332	0.60595	1	0.030084	1	0.31895	1	1	1	0.32637	1	1	1
20q gain	37 (9%)	393	1.2662e-08	7.8e-06	7.131e-07	0.000436	0.228	1	0.053429	1	0.52325	1	1	1	0.527	1	1	1
21q gain	21 (5%)	409	0.17726	1	0.0062537	1	0.50233	1	0.21168	1	0.81446	1	0.78202	1	0.40891	1	1	1
22q gain	15 (3%)	415	0.79011	1	0.043511	1	0.79724	1	0.17251	1	0.02433	1	1	1	1	1	0.38924	1
xq gain	30 (7%)	400	0.92199	1	0.46487	1	0.0038947	1	0.40413	1	0.073289	1	0.48193	1	0.23031	1	0.1077	1
1p loss	159 (37%)	271	0.0012509	0.734	0.00064105	0.378	1	1	0.76766	1	9.9999e-06	0.00606	0.018775	1	0.35055	1	1	1
1q loss	23 (5%)	407	0.73168	1	0.046927	1	0.82987	1	0.95948	1	0.02868	1	0.59548	1	0.14346	1	0.59983	1
2p loss	16 (4%)	414	0.26266	1	0.84516	1	0.31841	1	0.78445	1	0.47662	1	1	1	1	1	1	1
2q loss	13 (3%)	417	0.90943	1	0.15587	1	0.40253	1	0.47014	1	0.12673	1	0.737	1	1	1	1	1
3p loss	21 (5%)	409	0.053293	1	0.66023	1	0.17776	1	0.00052824	0.313	0.60786	1	1	1	1	1	0.1851	1
3q loss	23 (5%)	407	0.01661	1	0.42734	1	0.085574	1	0.18564	1	0.96343	1	0.59548	1	0.70523	1	0.21496	1
4p loss	58 (13%)	372	0.75291	1	0.0039142	1	0.065371	1	0.73358	1	0.00201	1	0.16642	1	0.42174	1	0.14325	1
4q loss	74 (17%)	356	0.78174	1	0.15509	1	0.15811	1	0.94174	1	0.0050999	1	0.26985	1	0.75127	1	0.086799	1
5p loss	28 (7%)	402	0.88989	1	0.22402	1	0.69523	1	0.11457	1	0.01477	1	0.0062169	1	0.76096	1	0.61402	1
5q loss	28 (7%)	402	0.054049	1	0.22917	1	0.32939	1	0.51522	1	0.066869	1	0.026356	1	0.76218	1	1	1
6p loss	25 (6%)	405	1.2551e-05	0.00757	0.15609	1	1	1	0.2979	1	0.15257	1	1	1	0.11568	1	0.59983	1
6q loss	50 (12%)	380	4.2746e-06	0.0026	0.051011	1	0.64992	1	0.0060988	1	3e-04	0.178	0.095077	1	0.088579	1	0.69621	1
7p loss	3 (1%)	427	0.54577	1	0.64018	1	0.58589	1	NA	NA	0.62804	1	1	1	1	1	1	1
7q loss	3 (1%)	427	0.6775	1	0.94038	1	1	1	0.92531	1	0.62669	1	1	1	1	1	1	1
8p loss	13 (3%)	417	0.058915	1	0.15194	1	0.78122	1	0.15711	1	0.24784	1	0.31917	1	0.25294	1	0.41423	1
8q loss	9 (2%)	421	0.021107	1	0.14034	1	0.51682	1	0.3389	1	0.43404	1	1	1	0.16999	1	0.30813	1
9p loss	96 (22%)	334	0.00058342	0.344	0.063575	1	0.81577	1	0.23689	1	0.082969	1	0.046121	1	0.74496	1	0.53944	1
9q loss	38 (9%)	392	0.062909	1	0.1886	1	0.86492	1	0.013985	1	0.95239	1	1	1	0.15982	1	0.64468	1
10p loss	68 (16%)	362	0	0	3.8066e-15	2.36e-12	0.50603	1	0.0029192	1	5.9999e-05	0.0359	0.62468	1	0.02772	1	1	1
10q loss	80 (19%)	350	4.774e-15	2.95e-12	1.3653e-13	8.42e-11	0.38405	1	0.014746	1	3e-05	0.018	0.75985	1	0.070099	1	0.74668	1
11p loss	53 (12%)	377	0.28451	1	0.46407	1	0.46329	1	0.12223	1	0.01105	1	0.47064	1	1	1	1	1
11q loss	19 (4%)	411	0.0033539	1	0.068404	1	0.81624	1	0.065367	1	0.02158	1	0.38761	1	1	1	0.54517	1
12p loss	21 (5%)	409	0.77376	1	0.34185	1	0.50233	1	0.39773	1	0.16181	1	0.78202	1	1	1	1	1
12q loss	40 (9%)	390	0.43617	1	0.29544	1	0.73875	1	0.33418	1	0.03443	1	0.53812	1	0.68623	1	0.38227	1
13q loss	98 (23%)	332	0.15636	1	0.67223	1	0.10521	1	0.26043	1	0.53404	1	0.016055	1	0.4407	1	0.38179	1
14q loss	65 (15%)	365	4.2956e-06	0.00261	0.00016161	0.0965	0.89268	1	0.044195	1	0.18313	1	0.50712	1	0.25214	1	0.4858	1
15q loss	39 (9%)	391	0.17286	1	0.67134	1	0.50157	1	0.95167	1	0.76999	1	1	1	0.80401	1	1	1
16p loss	11 (3%)	419	0.063154	1	0.00019824	0.118	0.35994	1	0.15529	1	0.54363	1	1	1	1	1	0.36325	1
16q loss	19 (4%)	411	0.052463	1	0.000259	0.154	1	1	0.3837	1	0.36194	1	0.5627	1	0.6285	1	0.54517	1
17p loss	12 (3%)	418	0.014768	1	0.046433	1	0.38278	1	0.0030549	1	0.70562	1	0.4735	1	1	1	0.077359	1
17q loss	8 (2%)	422	0.43978	1	0.1549	1	0.7363	1	0.034089	1	0.82531	1	1	1	1	1	0.036029	1
18p loss	59 (14%)	371	0.66375	1	0.0067414	1	0.049052	1	0.68052	1	0.31336	1	0.73299	1	0.072669	1	0.45296	1
18q loss	54 (13%)	376	0.66553	1	0.052384	1	0.3056	1	0.89872	1	0.2028	1	1	1	0.099499	1	0.43276	1
19p loss	19 (4%)	411	0.35796	1	0.9713	1	0.81624	1	0.17372	1	0.95577	1	0.085333	1	0.10962	1	0.50493	1
19q loss	177 (41%)	253	0.026548	1	0.010946	1	1	1	0.54279	1	9.9999e-06	0.00606	0.1851	1	0.92404	1	0.80064	1
20p loss	5 (1%)	425	0.65685	1	0.98986	1	0.65865	1	NA	NA	0.54661	1	1	1	0.090329	1	1	1
21q loss	26 (6%)	404	0.6864	1	0.85877	1	0.31654	1	0.0020667	1	0.0262	1	0.62209	1	1	1	1	1
22q loss	46 (11%)	384	2.9164e-05	0.0175	5.445e-05	0.0326	0.63914	1	0.024515	1	0.22778	1	1	1	0.16891	1	1	1
xq loss	56 (13%)	374	0.023859	1	0.20097	1	0.1952	1	0.47834	1	0.88741	1	0.86078	1	0.4012	1	1	1