Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	167 (29%)	404	0.18316	1	0.076533	1	0.33291	1	0.24391	1	0.20613	1	0.27323	1	0.84687	1	0.4613	1
1q gain	218 (38%)	353	0.53653	1	0.00075849	0.47	0.26226	1	0.12077	1	1	1	0.75609	1	0.57203	1	0.74094	1
2p gain	183 (32%)	388	0.11087	1	3.3915e-06	0.00213	1	1	0.6001	1	1	1	0.8288	1	0.677	1	1	1
2q gain	152 (27%)	419	0.12629	1	0.00071661	0.445	1	1	0.72051	1	0.17438	1	1	1	0.44628	1	0.70722	1
3p gain	160 (28%)	411	0.71139	1	0.0039779	1	0.73143	1	0.36793	1	0.56324	1	0.46674	1	0.31087	1	1	1
3q gain	271 (47%)	300	0.51626	1	2.2877e-07	0.000144	0.17788	1	0.97769	1	0.25062	1	0.50829	1	0.70767	1	0.52116	1
4p gain	59 (10%)	512	0.041128	1	0.029065	1	0.35425	1	0.19538	1	0.27949	1	0.36144	1	0.45335	1	0.25743	1
4q gain	32 (6%)	539	0.064499	1	0.047036	1	1	1	0.18007	1	0.15914	1	NA	NA	0.5194	1	0.46435	1
5p gain	195 (34%)	376	0.44563	1	0.0070083	1	0.11449	1	0.32225	1	1	1	0.03793	1	0.4411	1	1	1
5q gain	59 (10%)	512	0.92264	1	0.20982	1	0.34817	1	0.16007	1	1	1	0.13747	1	0.90961	1	1	1
6p gain	166 (29%)	405	0.26206	1	7.0881e-06	0.00444	0.74927	1	0.11262	1	0.56001	1	1	1	0.18466	1	0.72927	1
6q gain	97 (17%)	474	0.41818	1	0.00018657	0.116	1	1	0.19557	1	1	1	0.7084	1	0.20079	1	0.67606	1
7p gain	178 (31%)	393	0.93904	1	0.00076292	0.471	0.77499	1	0.11902	1	0.55578	1	0.80266	1	0.0333	1	0.17679	1
7q gain	198 (35%)	373	0.47592	1	0.00187	1	0.79684	1	0.13748	1	0.55494	1	0.9606	1	0.04108	1	1	1
8p gain	117 (20%)	454	0.92134	1	0.80918	1	0.607	1	0.80399	1	0.49804	1	0.49274	1	0.50647	1	1	1
8q gain	239 (42%)	332	0.394	1	0.11345	1	0.32323	1	0.72861	1	1	1	0.12223	1	0.17336	1	0.52692	1
9p gain	88 (15%)	483	0.47147	1	0.86132	1	1	1	0.26395	1	0.39533	1	1	1	0.7087	1	0.36915	1
9q gain	43 (8%)	528	0.70516	1	0.21215	1	1	1	0.50803	1	0.20967	1	1	1	0.18917	1	1	1
10p gain	185 (32%)	386	0.46453	1	1.9182e-08	1.21e-05	0.10646	1	0.38113	1	0.24649	1	0.88523	1	0.48748	1	0.50731	1
10q gain	108 (19%)	463	0.75956	1	0.00071857	0.446	0.16674	1	0.85219	1	1	1	0.73927	1	0.69749	1	1	1
11p gain	76 (13%)	495	0.095591	1	0.69207	1	1	1	0.47029	1	0.34904	1	0.44768	1	0.33498	1	1	1
11q gain	112 (20%)	459	0.89697	1	0.77606	1	1	1	0.65135	1	1	1	0.31684	1	1	1	0.21863	1
12p gain	253 (44%)	318	0.38415	1	5.5879e-10	3.54e-07	0.34806	1	0.11972	1	1	1	0.96129	1	0.50106	1	0.3268	1
12q gain	175 (31%)	396	0.17744	1	9.3226e-08	5.89e-05	0.083819	1	0.01804	1	1	1	0.20683	1	0.15521	1	0.46177	1
13q gain	59 (10%)	512	0.67569	1	0.016001	1	1	1	0.17757	1	0.27949	1	0.81273	1	0.61955	1	0.61105	1
14q gain	58 (10%)	513	0.066712	1	0.21549	1	1	1	0.81294	1	0.028473	1	0.86391	1	0.90915	1	0.60757	1
15q gain	39 (7%)	532	0.16162	1	0.91509	1	1	1	0.11394	1	1	1	NA	NA	1	1	1	1
16p gain	59 (10%)	512	0.8645	1	0.18784	1	1	1	0.043937	1	1	1	0.11797	1	0.91179	1	1	1
16q gain	31 (5%)	540	0.77131	1	0.95546	1	1	1	0.1469	1	1	1	0.17999	1	0.80117	1	1	1
17p gain	22 (4%)	549	0.16768	1	0.44734	1	1	1	0.96084	1	1	1	NA	NA	0.37015	1	1	1
17q gain	47 (8%)	524	0.63319	1	0.44328	1	1	1	0.48684	1	1	1	0.090059	1	0.38556	1	1	1
18p gain	119 (21%)	452	0.13513	1	0.035664	1	1	1	0.91649	1	1	1	0.62917	1	0.95543	1	1	1
18q gain	72 (13%)	499	0.31047	1	0.49699	1	1	1	0.96723	1	1	1	0.86114	1	0.72039	1	0.61506	1
19p gain	168 (29%)	403	0.355	1	0.070555	1	0.75227	1	0.66039	1	0.20831	1	0.42424	1	0.2532	1	0.72942	1
19q gain	160 (28%)	411	0.79263	1	0.0137	1	0.15177	1	0.83652	1	0.19108	1	0.42532	1	0.02965	1	0.73434	1
20p gain	286 (50%)	285	0.0092055	1	1.0163e-06	0.000639	0.74967	1	0.34345	1	1	1	0.44275	1	0.22848	1	0.75153	1
20q gain	324 (57%)	247	0.042773	1	4.1435e-05	0.0259	0.76017	1	0.30931	1	1	1	0.50777	1	0.0164	1	0.35541	1
21q gain	109 (19%)	462	0.98674	1	0.0010534	0.65	0.071829	1	0.36793	1	1	1	0.52391	1	0.72198	1	0.68583	1
22q gain	24 (4%)	547	0.15597	1	0.68378	1	0.16271	1	0.43932	1	1	1	1	1	0.64827	1	1	1
xq gain	105 (18%)	466	0.57896	1	0.14967	1	0.067849	1	0.50584	1	1	1	0.73989	1	0.85759	1	1	1
1p loss	64 (11%)	507	0.91201	1	0.2849	1	1	1	0.1265	1	0.30044	1	0.86415	1	0.48587	1	0.30448	1
1q loss	43 (8%)	528	0.68065	1	0.40291	1	1	1	0.16108	1	0.20967	1	0.7372	1	0.2918	1	0.5295	1
2p loss	53 (9%)	518	0.79762	1	0.49742	1	1	1	0.14493	1	1	1	NA	NA	0.9483	1	0.60757	1
2q loss	59 (10%)	512	0.84309	1	0.018469	1	0.3533	1	0.48128	1	1	1	0.66085	1	0.90749	1	0.60869	1
3p loss	93 (16%)	478	0.9994	1	0.010912	1	0.51625	1	0.47308	1	0.41396	1	0.24152	1	0.36442	1	1	1
3q loss	43 (8%)	528	0.30561	1	0.12486	1	0.27548	1	0.7837	1	0.20967	1	NA	NA	0.75872	1	0.54462	1
4p loss	312 (55%)	259	0.64115	1	0.80049	1	0.16858	1	0.31726	1	1	1	0.75741	1	0.60866	1	1	1
4q loss	358 (63%)	213	0.50398	1	0.8386	1	0.77992	1	0.90597	1	1	1	0.79946	1	0.54914	1	0.32606	1
5p loss	131 (23%)	440	0.77843	1	0.023582	1	0.65187	1	0.026746	1	1	1	0.10253	1	0.84362	1	0.70533	1
5q loss	221 (39%)	350	0.50766	1	0.014287	1	1	1	0.033857	1	1	1	0.16216	1	0.93686	1	0.52604	1
6p loss	163 (29%)	408	0.3136	1	0.073173	1	0.73825	1	0.91285	1	1	1	0.30916	1	0.54893	1	0.72942	1
6q loss	238 (42%)	333	0.59294	1	0.061976	1	0.14832	1	0.75275	1	1	1	0.40801	1	0.10264	1	0.52357	1
7p loss	120 (21%)	451	0.91697	1	0.89726	1	0.61374	1	0.079792	1	1	1	0.39259	1	0.75798	1	0.69405	1
7q loss	81 (14%)	490	0.29709	1	0.21602	1	0.46789	1	0.11394	1	0.3686	1	0.54754	1	0.34343	1	0.37056	1
8p loss	273 (48%)	298	0.12073	1	0.028414	1	0.17444	1	0.1418	1	1	1	0.39262	1	0.7819	1	0.52209	1
8q loss	89 (16%)	482	0.14684	1	0.0033842	1	1	1	0.2946	1	1	1	0.43495	1	0.67487	1	0.64459	1
9p loss	262 (46%)	309	0.75576	1	0.01204	1	0.45604	1	0.64043	1	0.59607	1	0.16868	1	0.67054	1	0.52551	1
9q loss	285 (50%)	286	0.42861	1	6.9726e-07	0.000439	0.49284	1	0.86475	1	0.62368	1	0.83742	1	0.57678	1	1	1
10p loss	96 (17%)	475	0.61998	1	0.1426	1	1	1	0.67813	1	0.42494	1	0.54295	1	0.38324	1	1	1
10q loss	124 (22%)	447	0.77094	1	0.082762	1	0.62055	1	0.98316	1	0.010048	1	0.89181	1	0.50144	1	0.69345	1
11p loss	196 (34%)	375	0.84219	1	0.0029185	1	1	1	0.60318	1	1	1	0.75592	1	0.35963	1	0.73038	1
11q loss	148 (26%)	423	0.5498	1	0.014134	1	0.27722	1	0.090489	1	1	1	0.82528	1	0.48274	1	0.70722	1
12p loss	78 (14%)	493	0.91249	1	0.075593	1	1	1	0.69842	1	1	1	1	1	0.23995	1	1	1
12q loss	103 (18%)	468	0.41765	1	0.34197	1	1	1	0.37617	1	1	1	0.62536	1	0.79495	1	1	1
13q loss	305 (53%)	266	0.53661	1	0.58235	1	0.74885	1	0.81325	1	0.60047	1	0.72432	1	0.49988	1	0.52271	1
14q loss	212 (37%)	359	0.48489	1	0.00069597	0.433	0.77995	1	0.75184	1	0.29848	1	0.53838	1	0.43734	1	0.18561	1
15q loss	276 (48%)	295	0.51013	1	0.0001668	0.104	0.48557	1	0.58603	1	0.61223	1	0.75701	1	0.55265	1	0.52442	1
16p loss	330 (58%)	241	0.49182	1	0.1614	1	0.75983	1	0.90792	1	0.26694	1	0.90093	1	0.48337	1	0.097904	1
16q loss	408 (71%)	163	0.11983	1	4.8127e-05	0.0301	0.74788	1	0.085879	1	0.56153	1	0.53222	1	0.90112	1	0.15713	1
17p loss	473 (83%)	98	0.88958	1	0.32675	1	0.53108	1	0.8965	1	0.43219	1	0.39165	1	0.76162	1	0.3831	1
17q loss	379 (66%)	192	0.85148	1	0.5805	1	0.79977	1	0.0091603	1	0.55442	1	0.4681	1	0.71716	1	0.095282	1
18p loss	231 (40%)	340	0.075141	1	0.96836	1	0.76324	1	0.44038	1	0.065698	1	0.36444	1	0.03458	1	1	1
18q loss	289 (51%)	282	0.12776	1	0.31106	1	0.49106	1	0.41589	1	0.2488	1	0.26432	1	0.10369	1	0.21356	1
19p loss	184 (32%)	387	0.26842	1	0.034371	1	0.19594	1	0.29648	1	0.55474	1	0.30725	1	0.57149	1	0.7344	1
19q loss	176 (31%)	395	0.99395	1	0.503	1	0.18003	1	0.051799	1	0.55629	1	0.1598	1	0.54741	1	0.51148	1
20p loss	49 (9%)	522	0.055424	1	0.40158	1	1	1	0.38263	1	0.23636	1	0.082139	1	0.76167	1	0.24575	1
20q loss	32 (6%)	539	0.13681	1	0.8724	1	1	1	0.43932	1	1	1	NA	NA	1	1	0.48136	1
21q loss	194 (34%)	377	0.80921	1	0.31482	1	0.40539	1	0.12684	1	1	1	1	1	0.3017	1	0.75228	1
22q loss	427 (75%)	144	0.23362	1	0.081047	1	0.26622	1	0.37071	1	0.57568	1	0.03943	1	1	1	1	1
xq loss	274 (48%)	297	0.8071	1	0.0018383	1	0.74957	1	0.27314	1	0.10986	1	0.55653	1	0.11517	1	0.7572	1