Clinical Features	CN_CNMF		METHLYATION_CNMF		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_1q21.3	30 (19%)	132	0.00488	0.903	0.60941	1	0.63694	1	0.94118	1	0.90183	1	0.44707	1	0.69265	1	0.82522	1
amp_4q25	6 (4%)	156	0.88198	1	0.76061	1	0.12995	1	0.38832	1	0.76602	1	0.62395	1	0.29266	1	0.50384	1
amp_4q31.1	13 (8%)	149	0.0054799	1	0.066119	1	0.61257	1	0.0078099	1	0.40461	1	0.22846	1	0.11476	1	0.32273	1
amp_11p15.2	8 (5%)	154	0.093609	1	0.078229	1	0.33222	1	0.10421	1	0.41047	1	0.39926	1	0.45846	1	0.81046	1
amp_12q13.3	16 (10%)	146	0.04493	1	0.13935	1	0.6104	1	0.61967	1	0.04658	1	0.27416	1	0.12929	1	0.32304	1
amp_14q24.3	10 (6%)	152	0.0298	1	0.19948	1	0.85196	1	0.17347	1	0.45733	1	0.71133	1	0.44281	1	0.85772	1
amp_17q21.31	16 (10%)	146	0.62767	1	0.88958	1	0.53568	1	0.00052999	0.105	0.75343	1	0.1431	1	0.066299	1	0.45513	1
del_1p12	113 (70%)	49	9.9999e-06	0.00224	2e-05	0.00422	9.9999e-06	0.00224	9.9999e-06	0.00224	0.00065999	0.129	0.01667	1	0.0073999	1	0.01527	1
del_1q42.13	18 (11%)	144	0.02188	1	0.13598	1	0.02503	1	0.17762	1	0.33306	1	0.53617	1	0.072869	1	0.24706	1
del_3p24.1	64 (40%)	98	0.00156	0.298	0.0074399	1	5e-05	0.0103	3e-05	0.00621	9.9999e-06	0.00224	0.00022	0.0447	9.9999e-06	0.00224	2e-05	0.00422
del_3q26.1	93 (57%)	69	2e-05	0.00422	0.51653	1	0.02382	1	9.9999e-06	0.00224	0.01921	1	0.0095099	1	0.01155	1	0.01084	1
del_4q28.3	10 (6%)	152	0.073449	1	0.24167	1	0.01819	1	0.33782	1	0.45663	1	0.7153	1	0.32491	1	0.32113	1
del_5q15	12 (7%)	150	0.59594	1	1	1	0.97486	1	1	1	0.92791	1	0.18732	1	0.24405	1	0.2943	1
del_6p12.3	10 (6%)	152	0.01135	1	0.26626	1	0.02051	1	0.086389	1	0.19727	1	0.16323	1	0.92859	1	0.051349	1
del_6q16.1	24 (15%)	138	0.13632	1	0.076479	1	0.02632	1	0.0074699	1	0.01519	1	0.0056999	1	0.082879	1	0.095869	1
del_8p22	25 (15%)	137	0.00167	0.317	0.083309	1	0.0063599	1	0.0090299	1	0.20945	1	0.23894	1	0.02699	1	0.24259	1
del_8q23.3	13 (8%)	149	0.03258	1	0.86751	1	0.27513	1	0.51845	1	0.071779	1	0.46515	1	0.92914	1	0.29675	1
del_9p24.2	15 (9%)	147	0.28849	1	0.33954	1	0.091399	1	0.1772	1	0.48064	1	0.077889	1	0.48243	1	0.30519	1
del_9q21.12	14 (9%)	148	0.0096799	1	0.54926	1	0.36944	1	0.38923	1	0.72629	1	0.111	1	0.58538	1	0.34257	1
del_11p15.4	58 (36%)	104	9.9999e-06	0.00224	2e-05	0.00422	0.00056999	0.112	9.9999e-06	0.00224	0.00013	0.0266	9.9999e-06	0.00224	9.9999e-06	0.00224	0.00038	0.0768
del_11q22.1	48 (30%)	114	9.9999e-06	0.00224	0.20866	1	0.00065999	0.129	0.01011	1	0.00346	0.65	0.00069999	0.136	0.00038	0.0768	0.03112	1
del_12q21.33	8 (5%)	154	0.059929	1	0.89183	1	0.91333	1	0.87693	1	0.59173	1	0.69707	1	0.83498	1	1	1
del_13q22.3	8 (5%)	154	0.24934	1	0.89253	1	0.27224	1	0.42913	1	1	1	0.61095	1	0.71947	1	0.85625	1
del_16q21	5 (3%)	157	0.066199	1	0.1148	1	0.55136	1	0.02612	1	0.21174	1	0.58972	1	0.090109	1	0.82842	1
del_17p13.2	64 (40%)	98	0.00017	0.0347	0.00042	0.084	0.01597	1	0.0061899	1	0.02725	1	0.0078799	1	0.17097	1	0.01691	1
del_17q11.2	42 (26%)	120	9.9999e-06	0.00224	0.00371	0.694	0.02416	1	0.00289	0.546	0.10301	1	0.071329	1	0.36816	1	0.13992	1
del_22q13.31	65 (40%)	97	9.9999e-06	0.00224	0.02026	1	0.02032	1	0.00047	0.0935	0.01104	1	0.02672	1	0.01623	1	0.01921	1
del_xp21.1	46 (28%)	116	0.00098999	0.19	0.0059299	1	0.0336	1	0.00388	0.722	0.00071999	0.139	0.04506	1	0.18524	1	0.03348	1