Clinical Features Time to Death AGE PATHOLOGY.T.STAGE PATHOLOGY.N.STAGE HISTOLOGICAL.TYPE COMPLETENESS.OF.RESECTION NUMBER.OF.LYMPH.NODES GLEASON_SCORE_COMBINED GLEASON_SCORE_PRIMARY GLEASON_SCORE_SECONDARY GLEASON_SCORE PSA_RESULT_PREOP PSA_VALUE RACE nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q amp_1q22 25 (7%) 338 0.50814 1 0.061888 1 0.00218 1 0.34766 1 0.052175 1 0.69464 1 0.23766 1 0.0012127 0.981 0.0016022 1 0.17298 1 0.00043325 0.36 0.14588 1 0.94857 1 1 1 amp_3q21.3 49 (13%) 314 0.27953 1 0.05314 1 0.00085999 0.7 0.064744 1 0.39655 1 0.01665 1 0.026265 1 0.004951 1 0.00055813 0.46 0.65105 1 1.0797e-05 0.00954 0.00077174 0.63 0.43852 1 0.65709 1 amp_3q26.2 57 (16%) 306 0.30966 1 0.18122 1 0.00286 1 0.029515 1 0.43839 1 0.063769 1 0.011653 1 0.0076549 1 0.00069324 0.567 0.78097 1 0.00020785 0.176 0.0079122 1 0.41175 1 1 1 amp_4p16.3 14 (4%) 349 0.57905 1 0.13775 1 0.00471 1 1 1 0.084521 1 0.21261 1 0.97558 1 0.028956 1 0.041353 1 0.38683 1 0.025001 1 0.044962 1 0.56689 1 1 1 amp_4q13.3 13 (4%) 350 0.57738 1 0.12086 1 0.03997 1 0.099061 1 0.38262 1 0.16991 1 0.055282 1 0.0057963 1 0.016183 1 0.094116 1 0.012964 1 0.0022918 1 0.85727 1 1 1 amp_5q35.3 18 (5%) 345 0.51326 1 0.00011598 0.0992 0.00142 1 0.15395 1 0.48964 1 0.29272 1 0.068789 1 0.06104 1 0.039675 1 0.61367 1 0.0017188 1 0.15378 1 0.22441 1 0.26138 1 amp_7p14.3 70 (19%) 293 0.74227 1 0.057146 1 0.062449 1 0.84055 1 1 1 0.01097 1 0.7634 1 0.029153 1 0.020077 1 0.31386 1 0.0048384 1 0.052949 1 0.37575 1 1 1 amp_7q22.1 67 (18%) 296 0.73517 1 0.030531 1 0.20833 1 0.40949 1 1 1 0.066719 1 0.33692 1 0.075073 1 0.031217 1 0.59295 1 0.011045 1 0.61836 1 0.62756 1 1 1 amp_8p11.23 41 (11%) 322 0.30018 1 0.0033427 1 0.074529 1 0.80484 1 1 1 0.19269 1 0.71652 1 0.00025236 0.213 1.0319e-05 0.00913 0.45154 1 0.00018104 0.154 0.036512 1 0.41428 1 1 1 amp_8q22.1 103 (28%) 260 0.36515 1 0.21156 1 5e-05 0.0435 0.29575 1 0.36496 1 0.04862 1 0.22024 1 1.0153e-05 0.00901 1.4179e-07 0.000129 0.32652 1 2.7969e-06 0.00252 0.016733 1 0.3502 1 1 1 amp_8q24.21 98 (27%) 265 0.87027 1 0.18744 1 0.00025 0.211 0.21285 1 1 1 0.19613 1 0.14103 1 4.1605e-06 0.00372 2.0905e-07 0.00019 0.16703 1 2.8615e-06 0.00257 0.022459 1 0.49805 1 0.81333 1 amp_9q33.3 38 (10%) 325 0.36538 1 0.10639 1 0.00016 0.136 0.0016545 1 0.036645 1 0.30361 1 0.00042299 0.352 1.3421e-05 0.0118 2.1944e-06 0.00198 0.10462 1 3.5888e-07 0.000325 0.01443 1 0.22702 1 0.55334 1 amp_11q13.2 25 (7%) 338 0.46634 1 0.043524 1 0.00265 1 0.008768 1 0.223 1 0.20061 1 0.0017934 1 0.00031995 0.268 5.983e-05 0.0519 0.42817 1 5.7713e-05 0.0501 0.080416 1 0.79599 1 0.34778 1 amp_12q23.1 21 (6%) 342 0.47893 1 0.39356 1 0.00401 1 0.0021413 1 0.16922 1 0.04061 1 0.00036656 0.305 2.3367e-05 0.0205 2.2768e-05 0.02 0.097426 1 9.7619e-07 0.000882 0.0015483 1 0.23045 1 1 1 amp_13q12.11 17 (5%) 346 0.588 1 0.0069078 1 0.074059 1 0.45914 1 0.018292 1 0.40971 1 0.48322 1 0.1877 1 0.03997 1 0.75967 1 0.17091 1 0.16912 1 0.022782 1 0.30749 1 amp_14q21.1 20 (6%) 343 0.17069 1 0.097239 1 0.3311 1 0.078615 1 0.028771 1 0.73267 1 0.048717 1 0.0059664 1 0.023877 1 0.16777 1 0.00017991 0.153 0.9745 1 0.79533 1 1 1 amp_15q11.2 10 (3%) 353 0.052673 1 0.40009 1 0.59247 1 0.0039478 1 0.30884 1 0.35217 1 0.00030397 0.255 0.064038 1 0.0037784 1 0.81671 1 0.013327 1 0.89729 1 0.84116 1 NA NA amp_16q11.2 18 (5%) 345 0.59878 1 0.068274 1 0.0062499 1 0.7109 1 0.13101 1 0.49638 1 0.5752 1 0.023323 1 0.045461 1 0.32841 1 0.0056556 1 0.052854 1 0.24153 1 1 1 amp_17q23.2 13 (4%) 350 0.69652 1 0.2649 1 0.13756 1 0.40912 1 0.073937 1 0.74549 1 0.35774 1 0.22161 1 0.274 1 0.41501 1 0.054708 1 0.28984 1 0.48967 1 1 1 amp_19q13.43 10 (3%) 353 0.59448 1 0.19412 1 0.00243 1 0.64033 1 0.30884 1 0.66903 1 0.53491 1 0.1073 1 0.047029 1 0.51746 1 0.0070879 1 0.013416 1 0.46964 1 1 1 amp_20q13.2 26 (7%) 337 0.43723 1 0.022589 1 4e-05 0.0349 0.2356 1 0.23677 1 0.11001 1 0.16109 1 0.0076245 1 0.00052651 0.435 0.66054 1 8.8261e-05 0.0759 0.028951 1 0.5782 1 1 1 amp_xp22.11 17 (5%) 346 0.6587 1 0.045481 1 0.32013 1 1 1 0.11884 1 0.17603 1 0.82866 1 0.040893 1 0.0070855 1 0.92793 1 0.041853 1 0.84148 1 0.41594 1 0.26169 1 amp_xp22.11 16 (4%) 347 0.5981 1 0.2459 1 0.36523 1 1 1 0.10701 1 0.17604 1 0.9066 1 0.025888 1 0.0024059 1 0.86735 1 0.054911 1 0.16244 1 0.99128 1 0.21461 1 amp_xp21.1 16 (4%) 347 0.58552 1 0.0043886 1 0.12436 1 0.7109 1 0.015388 1 0.13667 1 0.57526 1 0.01682 1 0.0045325 1 0.79795 1 0.0061304 1 0.17573 1 0.81603 1 0.0072999 1 amp_xq21.1 13 (4%) 350 0.56865 1 0.053517 1 0.64356 1 1 1 1 1 0.12264 1 0.93681 1 0.13032 1 0.1089 1 0.66977 1 0.018137 1 0.081979 1 0.73041 1 0.34693 1 amp_xq21.1 11 (3%) 352 0.59433 1 0.012555 1 0.46003 1 0.19838 1 1 1 0.12123 1 0.23476 1 0.052931 1 0.069329 1 0.42657 1 0.0073838 1 0.028373 1 0.61766 1 0.02701 1 amp_xq25 13 (4%) 350 0.54013 1 0.1045 1 0.64158 1 1 1 1 1 0.12457 1 0.99789 1 0.037065 1 0.1089 1 0.19865 1 0.029931 1 0.52202 1 0.89569 1 0.01794 1 amp_xq27.1 14 (4%) 349 0.66939 1 0.0047121 1 1 1 0.70109 1 1 1 0.12447 1 0.44976 1 0.691 1 0.32494 1 0.67854 1 0.29486 1 0.6817 1 0.98793 1 0.42709 1 del_1p31.3 43 (12%) 320 0.87749 1 0.2439 1 0.04842 1 0.80859 1 0.37888 1 0.43474 1 0.82658 1 0.0011618 0.942 0.04369 1 0.0049991 1 0.0038927 1 0.88617 1 0.12859 1 0.19957 1 del_1p22.1 39 (11%) 324 0.39476 1 0.34368 1 0.03018 1 0.45096 1 0.37585 1 0.84091 1 0.36705 1 0.0049031 1 0.0033565 1 0.31598 1 0.007372 1 0.011923 1 0.98725 1 1 1 del_1q23.1 19 (5%) 344 0.18841 1 0.11416 1 0.8553 1 1 1 1 1 0.91256 1 0.67017 1 0.14924 1 0.18102 1 0.52977 1 0.98713 1 0.51243 1 0.78014 1 1 1 del_1q42.3 32 (9%) 331 1.709e-06 0.00154 0.061729 1 0.53481 1 0.029757 1 0.61538 1 0.02194 1 0.022866 1 0.064942 1 0.044469 1 0.75036 1 0.056737 1 0.13146 1 0.2711 1 0.55525 1 del_2p21 33 (9%) 330 0.39235 1 0.39807 1 0.0078899 1 0.034412 1 0.61774 1 0.23853 1 0.033753 1 0.00031377 0.263 0.00028466 0.24 0.068593 1 0.00096794 0.787 0.44909 1 0.19573 1 1 1 del_2q22.1 64 (18%) 299 0.82179 1 0.0001164 0.0994 0.47352 1 0.83913 1 0.47903 1 0.34869 1 0.8615 1 0.055949 1 0.00055863 0.46 0.40636 1 0.0652 1 0.42428 1 0.22632 1 0.41412 1 del_2q22.3 58 (16%) 305 0.88504 1 0.0018311 1 0.85934 1 1 1 0.7014 1 0.72576 1 0.85565 1 0.28105 1 0.034742 1 0.69173 1 0.13519 1 0.14203 1 0.26947 1 1 1 del_3p13 59 (16%) 304 0.26343 1 0.011216 1 0.77066 1 0.38614 1 0.45123 1 0.14447 1 0.35889 1 0.4152 1 0.53975 1 0.64111 1 0.41302 1 0.2022 1 0.71352 1 1 1 del_3q29 25 (7%) 338 0.47259 1 0.27903 1 0.77154 1 0.14631 1 0.223 1 0.30067 1 0.13344 1 0.11323 1 0.46759 1 0.067599 1 0.12797 1 0.13389 1 0.93452 1 1 1 del_4q28.2 37 (10%) 326 0.41289 1 0.0020109 1 0.098189 1 1 1 0.63068 1 0.62002 1 0.89878 1 0.011172 1 0.0041449 1 0.49189 1 0.011384 1 0.54385 1 0.30767 1 0.29994 1 del_5q11.2 62 (17%) 301 0.82956 1 0.19123 1 2e-05 0.0176 0.011008 1 0.7053 1 0.68946 1 0.0030545 1 1.0218e-05 0.00905 5.2467e-06 0.00468 0.12092 1 4.9149e-06 0.00439 0.00045184 0.375 0.95941 1 0.43997 1 del_5q13.2 64 (18%) 299 0.86056 1 0.32392 1 9.9999e-06 0.00888 0.10589 1 0.47903 1 0.79161 1 0.061026 1 7.7683e-07 0.000703 3.3636e-07 0.000305 0.051124 1 3.6247e-06 0.00325 0.0030997 1 0.70466 1 0.29395 1 del_5q21.1 76 (21%) 287 0.75584 1 0.023318 1 0.27627 1 0.7043 1 0.31646 1 0.59755 1 0.72546 1 0.0041508 1 2.3208e-05 0.0204 0.61169 1 0.047279 1 0.20697 1 0.76748 1 0.73319 1 del_6p25.1 27 (7%) 336 0.49645 1 0.34108 1 0.43104 1 0.0072766 1 0.61032 1 0.3397 1 0.0039806 1 0.001856 1 0.034074 1 0.026922 1 0.0045993 1 0.67274 1 0.56766 1 0.0067199 1 del_6q14.3 132 (36%) 231 0.59147 1 0.0014745 1 0.0391 1 0.0072008 1 1 1 0.00053999 0.446 0.0038128 1 9.4546e-06 0.00841 9.4796e-06 0.00843 0.098409 1 4.6046e-05 0.0401 0.00058105 0.477 0.81691 1 0.58246 1 del_7q31.33 24 (7%) 339 0.44581 1 0.36865 1 0.57741 1 0.018767 1 1 1 1 1 0.0042082 1 0.12 1 0.090781 1 0.64857 1 0.077605 1 0.69299 1 0.59853 1 1 1 del_8p23.2 153 (42%) 210 0.70384 1 0.41474 1 4e-05 0.0349 0.13845 1 0.78166 1 0.81697 1 0.080176 1 0.015648 1 0.00018321 0.156 0.73062 1 0.066198 1 0.091087 1 0.065608 1 0.37597 1 del_8p21.3 207 (57%) 156 0.69848 1 0.58538 1 0.00014 0.119 0.012189 1 0.56998 1 0.81286 1 0.0084904 1 0.03688 1 0.00030077 0.253 0.45162 1 0.23846 1 0.0013544 1 0.1944 1 0.72807 1 del_9p23 32 (9%) 331 0.40597 1 0.84097 1 0.14362 1 0.026032 1 0.61538 1 0.34027 1 0.012404 1 0.006797 1 0.0041203 1 0.30356 1 0.01046 1 0.7629 1 0.16696 1 1 1 del_10q23.31 109 (30%) 254 0.35027 1 0.75937 1 2e-04 0.17 0.014935 1 1 1 0.23615 1 0.014327 1 0.0028515 1 0.04991 1 0.0096098 1 0.0011973 0.97 0.31459 1 0.0084195 1 0.23403 1 del_11p11.2 24 (7%) 339 0.43831 1 0.35096 1 0.02512 1 0.34766 1 1 1 0.12256 1 0.22258 1 0.04126 1 0.0075494 1 0.86886 1 0.03809 1 0.23987 1 0.88666 1 0.00357 1 del_11q22.3 29 (8%) 334 0.47307 1 0.037258 1 0.00053999 0.446 0.76079 1 0.2785 1 0.069659 1 0.62709 1 0.0003345 0.28 2.6818e-05 0.0235 0.3639 1 0.0021945 1 0.020718 1 0.28139 1 0.63689 1 del_11q23.2 35 (10%) 328 0.42829 1 0.13188 1 0.00069999 0.572 0.7829 1 0.36212 1 0.060539 1 0.5875 1 0.00042815 0.356 0.00067461 0.553 0.10272 1 0.0019751 1 0.048583 1 0.42346 1 0.65759 1 del_12p13.1 82 (23%) 281 0.70197 1 0.87016 1 7.9999e-05 0.069 0.040987 1 0.17922 1 0.45079 1 0.032099 1 0.00096878 0.787 6.2304e-05 0.0539 0.2856 1 0.00034091 0.285 0.072872 1 0.015449 1 1 1 del_12q24.32 31 (9%) 332 0.66285 1 0.72501 1 0.016 1 0.054112 1 1 1 0.51735 1 0.036153 1 0.052128 1 0.02561 1 0.53368 1 0.031367 1 0.0085802 1 0.95851 1 1 1 del_13q14.13 168 (46%) 195 0.40455 1 0.019155 1 0.062899 1 0.26004 1 0.024713 1 0.0070999 1 0.24989 1 0.00034446 0.287 0.00056053 0.461 0.10947 1 0.00033435 0.28 0.02242 1 0.35728 1 0.0041 1 del_13q22.1 124 (34%) 239 0.044095 1 0.0079799 1 0.02999 1 0.23585 1 0.040922 1 0.080329 1 0.13359 1 0.00010268 0.088 0.0024951 1 0.0089406 1 3.2075e-06 0.00288 0.028824 1 0.92405 1 0.00046 0.381 del_15q21.3 45 (12%) 318 0.82976 1 0.81736 1 0.0032 1 0.13778 1 0.66836 1 0.40333 1 0.10119 1 2.421e-06 0.00218 5.0154e-06 0.00448 0.023313 1 1.218e-05 0.0107 0.85564 1 0.38313 1 1 1 del_16q22.3 130 (36%) 233 0.76521 1 0.20871 1 0.00287 1 0.7381 1 1 1 0.69885 1 0.61617 1 6.7366e-05 0.0581 2.4516e-05 0.0215 0.13365 1 3.7213e-05 0.0325 0.0027912 1 0.056058 1 0.71884 1 del_16q24.1 147 (40%) 216 0.63113 1 0.75018 1 9.9999e-05 0.0858 0.62235 1 0.77581 1 0.87351 1 0.47262 1 5.2683e-05 0.0458 1.089e-05 0.00962 0.17269 1 6.5041e-05 0.0562 0.0022264 1 0.05984 1 1 1 del_17p13.1 108 (30%) 255 0.86605 1 0.74121 1 0.00061999 0.508 0.0078883 1 1 1 0.1756 1 0.0032481 1 8.3716e-06 0.00746 6.1132e-05 0.0529 0.010371 1 2.9555e-06 0.00265 0.92059 1 0.14243 1 0.82047 1 del_17q21.31 72 (20%) 291 0.85695 1 0.41126 1 0.36378 1 0.21379 1 1 1 0.89807 1 0.14191 1 0.9883 1 0.63904 1 0.78723 1 0.75728 1 0.38403 1 0.78857 1 0.76427 1 del_18q21.31 95 (26%) 268 0.93416 1 0.63758 1 0.04929 1 0.10049 1 0.52698 1 0.00488 1 0.05515 1 9.6958e-05 0.0833 0.00085258 0.695 0.016862 1 8.7391e-05 0.0752 0.30072 1 0.7824 1 0.3956 1 del_18q23 100 (28%) 263 0.99098 1 0.24931 1 0.053659 1 0.14848 1 1 1 0.0194 1 0.079364 1 0.00027164 0.229 0.0026118 1 0.021936 1 0.00010943 0.0937 0.50824 1 0.46191 1 0.44318 1 del_19q13.2 33 (9%) 330 0.54048 1 0.058902 1 0.13381 1 0.59727 1 0.61774 1 0.27483 1 0.55084 1 0.0012215 0.987 0.00023547 0.199 0.28578 1 0.0033312 1 0.43919 1 0.58503 1 1 1 del_21q22.2 37 (10%) 326 0.42642 1 0.178 1 0.0185 1 0.062279 1 0.13634 1 0.75359 1 0.043589 1 0.42403 1 0.68116 1 0.35444 1 0.20854 1 0.96684 1 0.85073 1 0.075649 1 del_21q22.3 111 (31%) 252 0.08084 1 0.069143 1 0.080309 1 0.032726 1 1 1 0.28745 1 0.017034 1 0.65572 1 0.95396 1 0.28609 1 0.5762 1 0.33282 1 0.84853 1 0.13364 1