tcga_participant_barcode CLI_age CLI_vitalstatus CLI_daystodeath CLI_daystolastfollowup CLI_primarysiteofdisease CLI_neoplasm.diseasestage CLI_pathology.T.stage CLI_pathology.N.stage CLI_pathology.M.stage CLI_dccuploaddate CLI_gender CLI_dateofinitialpathologicdiagnosis CLI_daystolastknownalive CLI_radiationtherapy CLI_histologicaltype CLI_radiations.radiation.regimenindication CLI_completeness.of.resection CLI_number.of.lymph.nodes CLI_race CLI_ethnicity CLI_batchnumber CLUS_mRNA_cNMF CLUS_mRNA_cHierarchical CLUS_CN_cNMF CLUS_Methlyation_cNMF CLUS_RPPA_cNMF CLUS_RPPA_cHierarchical CLUS_mRNAseq_cNMF CLUS_mRNAseq_cHierarchical CLUS_miRseq_cNMF CLUS_miRseq_cHierarchical CLUS_miRseq_Mature_cNMF CLUS_miRseq_Mature_cHierarchical SMG_mutsig2.0_APC SMG_mutsig2.0_ERBB2 SMG_mutsig2.0_FBXW7 SMG_mutsig2.0_KIAA1804 SMG_mutsig2.0_KRAS SMG_mutsig2.0_KRTAP5-5 SMG_mutsig2.0_LRP1B_cosmic SMG_mutsig2.0_NRAS SMG_mutsig2.0_OPCML SMG_mutsig2.0_PIK3CA SMG_mutsig2.0_SMAD2 SMG_mutsig2.0_SMAD4 SMG_mutsig2.0_SPATA8 SMG_mutsig2.0_TCF7L2 SMG_mutsig2.0_TP53 SMG_mutsig.2CV_APC SMG_mutsig.2CV_ARID1A SMG_mutsig.2CV_ERBB2 SMG_mutsig.2CV_FBXW7 SMG_mutsig.2CV_KIAA1804 SMG_mutsig.2CV_KRAS SMG_mutsig.2CV_KRTAP5-5_cosmic SMG_mutsig.2CV_LRP1B_cosmic SMG_mutsig.2CV_NRAS SMG_mutsig.2CV_PIK3CA_cosmic SMG_mutsig.2CV_RBM10 SMG_mutsig.2CV_SMAD4 SMG_mutsig.2CV_TCF7L2 SMG_mutsig.2CV_TP53 rate_non rate_sil SMG_APC_mRNA SMG_ARID1A_mRNA SMG_ERBB2_mRNA SMG_FBXW7_mRNA SMG_KIAA1804_mRNA SMG_KRAS_mRNA SMG_KRTAP5-5_mRNA SMG_LRP1B_mRNA SMG_NRAS_mRNA SMG_OPCML_mRNA SMG_PIK3CA_mRNA SMG_RBM10_mRNA SMG_SMAD2_mRNA SMG_SMAD4_mRNA SMG_TCF7L2_mRNA SMG_TP53_mRNA Amp_1q21.3 Amp_1q32.2 Amp_5q22.3 Amp_6p21.1 Amp_8p11.23 Amp_8p11.21 Amp_8q24.21 Amp_10q22.2 Amp_11p15.5 Amp_11q13.3 Amp_12p13.33 Amp_12p12.1 Amp_13q12.13 Amp_13q12.2 Amp_13q22.1 Amp_15q26.1 Amp_16p11.2 Amp_17q12 Amp_17q24.1 Amp_19p13.2 Amp_20q11.21 Amp_20q11.23 Amp_20q13.31 Amp_Xp22.2 Del_1p36.11 Del_1p33 Del_1p13.2 Del_2p12 Del_3p14.2 Del_3q26.31 Del_4p13 Del_4q22.1 Del_4q35.1 Del_5q12.1 Del_5q22.2 Del_6p25.3 Del_6q26 Del_7q31.1 Del_8p23.2 Del_10q21.1 Del_10q25.2 Del_11q22.3 Del_12p13.1 Del_12q22 Del_14q11.2 Del_14q31.1 Del_15q21.1 Del_15q22.33 Del_16p13.3 Del_16q23.1 Del_17p11.2 Del_18q21.2 Del_18q22.1 Del_19p13.3 Del_20p12.1 Del_21q11.2 Del_22q13.31 Del_Xp22.33 CN_10p_Amp CN_10q_Amp CN_11p_Amp CN_11q_Amp CN_12p_Amp CN_12q_Amp CN_13q_Amp CN_14q_Amp CN_15q_Amp CN_16p_Amp CN_16q_Amp CN_17p_Amp CN_17q_Amp CN_18p_Amp CN_18q_Amp CN_19p_Amp CN_19q_Amp CN_1p_Amp CN_1q_Amp CN_20p_Amp CN_20q_Amp CN_21q_Amp CN_22q_Amp CN_2p_Amp CN_2q_Amp CN_3p_Amp CN_3q_Amp CN_4p_Amp CN_4q_Amp CN_5p_Amp CN_5q_Amp CN_6p_Amp CN_6q_Amp CN_7p_Amp CN_7q_Amp CN_8p_Amp CN_8q_Amp CN_9p_Amp CN_9q_Amp CN_Xq_Amp CN_10p_Del CN_10q_Del CN_11p_Del CN_11q_Del CN_12p_Del CN_12q_Del CN_13q_Del CN_14q_Del CN_15q_Del CN_16p_Del CN_16q_Del CN_17p_Del CN_17q_Del CN_18p_Del CN_18q_Del CN_19p_Del CN_19q_Del CN_1p_Del CN_1q_Del CN_20p_Del CN_20q_Del CN_21q_Del CN_22q_Del CN_2p_Del CN_2q_Del CN_3p_Del CN_3q_Del CN_4p_Del CN_4q_Del CN_5p_Del CN_5q_Del CN_6p_Del CN_6q_Del CN_7p_Del CN_7q_Del CN_8p_Del CN_8q_Del CN_9p_Del CN_9q_Del CN_Xq_Del mRNA_CNMF_HAVCR2_-0.88_1 mRNA_CNMF_OSCAR_-0.61_1 mRNA_CNMF_SV2B_-1.16_1 mRNA_CNMF_ATP1A1_0.76_1 mRNA_CNMF_CASZ1_0.43_1 mRNA_CNMF_ATP1A3_0.87_1 mRNA_CNMF_TNIK_0.93_1 mRNA_CNMF_DEFA5_3_1 mRNA_CNMF_TNFSF10_0.74_2 mRNA_CNMF_HLA-DMA_1.07_2 mRNA_CNMF_TAGAP_1.21_2 mRNA_CNMF_GPR171_1.19_2 mRNA_CNMF_SURF1_0.56_2 mRNA_CNMF_USP34_-0.4_2 mRNA_CNMF_SOX9_-0.71_2 mRNA_CNMF_INTS6_-0.55_2 mRNA_CNMF_NCBP2_-0.45_2 mRNA_CNMF_LRP6_-0.54_2 mRNA_CNMF_BCORL1_0.73_3 mRNA_CNMF_COMP_1.91_3 mRNA_CNMF_EVC2_0.66_3 mRNA_CNMF_SULF2_1.04_3 mRNA_CNMF_IFNG_-1.28_3 mRNA_CNMF_ACPP_-1.13_3 mRNA_CNMF_SULT1B1_-1.85_3 mRNA_CNMF_RASGEF1B_-0.6_3 Amp_ARNT_1q21.3_mRNA Amp_ASXL1_20q11.21_mRNA Amp_BCL2L1_20q11.21_mRNA Amp_BCL9_1q21.3_mRNA Amp_BLM_15q26.1_mRNA Amp_BPTF_17q24.1_mRNA Amp_BRIP1_17q24.1_mRNA Amp_CD79B_17q24.1_mRNA Amp_CDX2_13q12.2_mRNA Amp_CLTC_17q24.1_mRNA Amp_CRTC3_15q26.1_mRNA Amp_DDX5_17q24.1_mRNA Amp_ELK4_1q32.2_mRNA Amp_ERBB2_17q12_mRNA Amp_FCGR2B_1q21.3_mRNA Amp_FGFR1_8p11.23_mRNA Amp_FLT3_13q12.2_mRNA Amp_GNAS_20q13.31_mRNA Amp_HLF_17q24.1_mRNA Amp_IDH2_15q26.1_mRNA Amp_IGF1R_15q26.1_mRNA Amp_KDM5A_12p13.33_mRNA Amp_KRAS_12p12.1_mRNA Amp_MAFB_20q11.23_mRNA Amp_MCL1_1q21.3_mRNA Amp_MDM4_1q32.2_mRNA Amp_MSI2_17q24.1_mRNA Amp_MUC1_1q21.3_mRNA Amp_NOTCH2_1q21.3_mRNA Amp_NTRK1_1q21.3_mRNA Amp_NTRK3_15q26.1_mRNA Amp_PDE4DIP_1q21.3_mRNA Amp_PRCC_1q21.3_mRNA Amp_PRKAR1A_17q24.1_mRNA Amp_RNF43_17q24.1_mRNA Amp_SDHC_1q21.3_mRNA Amp_SLC45A3_1q32.2_mRNA Amp_SS18L1_20q13.31_mRNA Amp_TOP1_20q11.23_mRNA Amp_TPM3_1q21.3_mRNA Amp_TUBD1_17q24.1_mRNA Amp_WHSC1L1_8p11.23_mRNA Amp_ZNF217_20q13.31_mRNA Amp_ZRSR2_Xp22.2_mRNA Del_AKT1_14q31.1_mRNA Del_AKT2_19p13.3_mRNA Del_ANKS1B_12q22_mRNA Del_APC_5q22.2_mRNA Del_ARHGEF12_11q22.3_mRNA Del_ARID1A_1p36.11_mRNA Del_ARID2_12q22_mRNA Del_ATF1_12q22_mRNA Del_ATM_11q22.3_mRNA Del_ATP1A1_1p13.2_mRNA Del_BCL11A_2p12_mRNA Del_BCL11B_14q31.1_mRNA Del_BCL3_19p13.3_mRNA Del_BIRC3_11q22.3_mRNA Del_BMPR1A_10q25.2_mRNA Del_BRD4_19p13.3_mRNA Del_BTG1_12q22_mRNA Del_BUB1B_15q21.1_mRNA Del_CALR_19p13.3_mRNA Del_CAMTA1_1p36.11_mRNA Del_CBL_11q22.3_mRNA Del_CBLC_19p13.3_mRNA Del_CCNB1IP1_14q11.2_mRNA Del_CCNE1_19p13.3_mRNA Del_CD79A_19p13.3_mRNA Del_CDK4_12q22_mRNA Del_CDKN1B_12p13.1_mRNA Del_CEBPA_19p13.3_mRNA Del_CIC_19p13.3_mRNA Del_CNOT3_19p13.3_mRNA Del_DDIT3_12q22_mRNA Del_DDX10_11q22.3_mRNA Del_DDX6_11q22.3_mRNA Del_DICER1_14q31.1_mRNA Del_DNM2_19p13.3_mRNA Del_DUX4_4q35.1_mRNA Del_ELL_19p13.3_mRNA Del_ERCC2_19p13.3_mRNA Del_ETV6_12p13.1_mRNA Del_FAM46C_1p13.2_mRNA Del_FAT1_4q35.1_mRNA Del_FGFR1_8p11.21_mRNA Del_FGFR2_10q25.2_mRNA Del_FSTL3_19p13.3_mRNA Del_GAS7_17p11.2_mRNA Del_GNA11_19p13.3_mRNA Del_GOLGA5_14q31.1_mRNA Del_GPHN_14q31.1_mRNA Del_HMGA2_12q22_mRNA Del_HOOK3_8p11.21_mRNA Del_HOXC11_12q22_mRNA Del_HOXC13_12q22_mRNA Del_JAK3_19p13.3_mRNA Del_KLK2_19p13.3_mRNA Del_LRIG3_12q22_mRNA Del_LYL1_19p13.3_mRNA Del_MAP2K2_19p13.3_mRNA Del_MAP2K4_17p11.2_mRNA Del_MAX_14q31.1_mRNA Del_MDM2_12q22_mRNA Del_MDS2_1p36.11_mRNA Del_MLLT1_19p13.3_mRNA Del_NACA_12q22_mRNA Del_NFKB2_10q25.2_mRNA Del_NRAS_1p13.2_mRNA Del_NT5C2_10q25.2_mRNA Del_PAF1_19p13.3_mRNA Del_PAFAH1B2_11q22.3_mRNA Del_PARK2_6q26_mRNA Del_PCM1_8p11.21_mRNA Del_PCSK7_11q22.3_mRNA Del_PHOX2B_4p13_mRNA Del_POU2AF1_11q22.3_mRNA Del_PPP2R1A_19p13.3_mRNA Del_PPP2R2A_8p11.21_mRNA Del_PTEN_10q25.2_mRNA Del_RBM15_1p13.2_mRNA Del_REL_2p12_mRNA Del_RPL22_1p36.11_mRNA Del_SDHB_1p36.11_mRNA Del_SDHD_11q22.3_mRNA Del_SH3GL1_19p13.3_mRNA Del_SMAD4_18q21.2_mRNA Del_SMARCA4_19p13.3_mRNA Del_STK11_19p13.3_mRNA Del_SUFU_10q25.2_mRNA Del_TCF12_15q21.1_mRNA Del_TCF3_19p13.3_mRNA Del_TCF7L2_10q25.2_mRNA Del_TCL1A_14q31.1_mRNA Del_TCL6_14q31.1_mRNA Del_TFPT_19p13.3_mRNA Del_TLX1_10q25.2_mRNA Del_TPM4_19p13.3_mRNA Del_TRIM33_1p13.2_mRNA Del_TRIP11_14q31.1_mRNA Del_TSHR_14q31.1_mRNA Del_VTI1A_10q25.2_mRNA Del_WHSC1L1_8p11.21_mRNA Del_WIF1_12q22_mRNA Del_WRN_8p11.21_mRNA Del_WWOX_16q23.1_mRNA Del_XPO1_2p12_mRNA Del_ZNF132_19p13.3_mRNA Del_ZNF331_19p13.3_mRNA TCGA-AF-2687 57 0 NA 734 rectum stage iiic t3 n2 m0 25-9-2014 male 2009 595 NA rectal adenocarcinoma no r0 6 white not hispanic or latino 122.34.0 NA NA 1 1 NA NA 1 1 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.349154 11.094944 11.369956 9.158122 8.497574 10.373433 -0.232091 1.575312 10.888515 3.160275 8.547673 10.680843 10.360410 10.714132 9.463182 11.767953 0.1676000 -0.2504300 -0.4147600 0.4278800 -0.0498300 -0.0622800 0.3068900 -0.2432600 0.0472680 0.0472680 0.0731150 0.0731150 0.1204900 0.1013500 0.4844000 -0.2537200 0.0529520 0.0390540 0.0390540 -0.2411900 1.0638000 1.0638000 1.0638000 -0.0060904 -0.2580000 -0.2580000 -0.2575700 0.2316300 -0.0608180 -0.0608180 -0.2878600 -0.2878600 -0.6836000 -0.4342000 -0.8555100 0.4278800 0.3530200 0.1531700 -0.0866510 -0.2432600 -0.2456800 0.0472680 0.0731150 0.0627210 0.0000000 0.0000000 -0.2449600 -0.2352100 0.0529520 0.0529520 0.0390540 -0.2732000 -0.2732000 -0.2411900 1.0638000 -0.2124300 -0.0290380 -0.0060904 -0.243 -0.243 0.000 0.000 0.000 0.000 0.101 0.000 -0.245 0.000 0.000 0.000 0.000 -0.273 -0.273 -0.241 -0.241 -0.258 -0.258 1.064 1.064 -0.216 0.000 0.190 0.190 0.000 0.000 -0.288 -0.288 -0.320 -0.425 0.428 0.428 0.153 0.153 0.000 0.307 -0.219 -0.219 0.000 -0.243 -0.243 0.000 0.000 0.000 0.000 0.101 0.000 -0.245 0.000 0.000 0.000 0.000 -0.273 -0.273 -0.241 -0.241 -0.258 -0.258 1.064 1.064 -0.216 0.000 0.190 0.190 0.000 0.000 -0.288 -0.288 -0.320 -0.425 0.428 0.428 0.153 0.153 0.000 0.307 -0.219 -0.219 0.000 8.962710 7.371580 6.227385 13.885149 8.652124 5.710468 7.683833 4.160267 9.900453 10.008148 7.062574 5.907504 8.753795 11.123855 11.609911 9.625157 11.492254 10.167231 9.528673 10.799999 6.168833 12.667971 4.194221 3.160275 3.674845 8.364143 10.322062 11.486914 12.095927 10.113913 8.499272 10.500969 7.393662 5.996773 11.598667 13.064798 9.949105 13.399415 6.607157 11.369956 8.330196 10.719602 4.468394 14.845228 6.235559 11.306870 10.546441 10.311468 10.373433 10.183167 12.988558 9.784762 8.200495 9.283653 11.451825 3.160275 3.468388 10.455766 10.498848 12.056675 12.017363 11.443469 7.555856 9.415412 12.007253 13.270723 8.032396 9.846104 10.108360 7.695731 11.9449055 10.7294030 2.4684009 8.3491538 11.5609469 11.0949445 9.3927487 9.3622779 9.8447688 13.8851491 8.0671611 8.2088225 9.4000396 9.2767384 9.2895537 10.6909092 11.2710337 9.4611614 14.4158052 8.7380591 9.9030212 8.4421456 10.4014026 8.3900051 6.8340424 12.0648695 10.6574573 10.9391301 10.0069551 9.9055848 9.0397314 9.7430847 11.4301766 10.8878671 11.3618602 NA 8.7119333 8.9286566 10.2160696 8.2777282 11.5700657 10.7196023 7.4225896 10.7148596 10.0881897 8.7917076 10.2294328 8.6413975 10.0950062 9.6429346 5.9478625 7.2191646 8.7001681 NA 9.0429138 6.3529156 10.9865165 9.7805778 10.7090009 10.4372813 0.7679937 10.3254170 13.7023813 10.0602749 10.8885152 10.5005447 9.9410058 9.2777284 4.9577800 11.0754387 9.7759337 3.4118059 7.4890524 12.3280473 10.5220056 10.7573478 6.8287572 6.0253411 12.7120247 10.2742608 10.9630179 11.0631483 10.7141322 11.6081411 9.5648042 8.7763820 10.6383180 10.8904578 9.4631816 2.8554117 0.3528715 8.0690152 5.6134432 14.2465965 9.8653270 9.0323960 3.1602748 8.5239257 9.8461042 4.4118126 8.9087832 7.8868946 12.4612224 5.4261641 7.5720840 TCGA-AF-2689 41 1 1201 546 rectum stage iv t3 n2 m1 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 6 white not hispanic or latino 42.51.0 1 1 1 NA 1 1 NA NA 5 3 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 7 0 0 7 1.491262e-06 6.589298e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.01255100 -0.01255100 0.00550080 0.00000000 -0.48138000 -0.48138000 0.48986000 0.32715000 1.03370000 -0.01565500 -0.00890430 -0.00890430 0.40005000 0.40005000 0.39872000 -0.00793800 0.41055000 0.07997000 1.56940000 -0.13540000 1.98030000 1.12840000 1.18600000 0.08155600 -0.00669490 -0.00669490 -0.01255100 0.41808000 0.01651300 0.00710520 -0.01281800 0.00842210 -0.02089200 -0.02666500 -0.00578300 0.01218400 0.00000000 0.39324000 -0.48644000 0.32715000 -0.45580000 -0.01565500 -0.00890430 -0.00890430 -0.44925000 -0.47883000 0.00050263 0.00050263 0.41055000 0.41055000 -0.47335000 -0.45622000 -0.45622000 -0.13540000 -1.29290000 -0.45108000 -0.02949900 0.08155600 0.327 0.327 0.000 0.000 0.000 0.000 0.399 -0.456 0.000 0.411 0.411 -0.464 0.000 -0.453 -0.453 0.248 0.248 0.000 0.000 0.727 1.186 -0.451 0.000 0.426 0.426 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.427 -0.004 0.469 0.442 0.442 0.000 0.327 0.327 0.000 0.000 0.000 0.000 0.399 -0.456 0.000 0.411 0.411 -0.464 0.000 -0.453 -0.453 0.248 0.248 0.000 0.000 0.727 1.186 -0.451 0.000 0.426 0.426 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 0.427 -0.004 0.469 0.442 0.442 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AF-2690 76 1 524 524 rectum stage iiic t3 n2 m0 25-9-2014 female 2009 358 NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 122.34.0 NA NA 1 2 1 2 1 1 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.390305 10.303681 11.655825 8.419849 8.945106 9.861448 1.695816 1.473423 10.558239 3.210389 8.289347 10.483725 10.371276 10.383323 9.818466 11.205032 -0.3001500 0.0034687 -0.3108000 -0.2534600 -0.3540700 -0.3656700 1.0111000 -0.0772120 0.1373200 0.1373200 0.0012481 -0.0095895 0.3193000 0.3193000 0.3193000 -0.0078863 -0.0298570 0.3028200 0.3028200 0.4463000 1.1290000 1.1290000 1.1290000 0.0675180 -0.3360000 -0.3360000 -0.3001500 0.2660000 0.0499190 0.0314650 -0.2926000 -0.2926000 -0.2926000 -0.2898700 -0.3108000 -0.3060300 -0.2957500 0.0082710 -0.3687300 -0.0899690 -0.0772120 0.1373200 0.0012481 0.0000000 0.2908800 -0.3170400 -0.0015243 -0.0015243 -0.0298570 -0.0298570 -0.3638600 -0.3107300 -0.6480000 0.4463000 1.1290000 -0.3044300 0.2793100 0.0675180 0.000 0.000 0.137 0.137 0.000 0.000 0.319 -0.317 0.000 0.000 0.000 -0.061 0.303 -0.338 -0.338 0.446 0.000 -0.299 0.000 1.129 1.129 -0.304 0.279 0.260 0.260 0.000 0.000 -0.293 -0.293 0.000 -0.194 -0.253 -0.253 0.618 0.000 -0.354 0.494 0.676 0.000 0.000 0.000 0.000 0.137 0.137 0.000 0.000 0.319 -0.317 0.000 0.000 0.000 -0.061 0.303 -0.338 -0.338 0.446 0.000 -0.299 0.000 1.129 1.129 -0.304 0.279 0.260 0.260 0.000 0.000 -0.293 -0.293 0.000 -0.194 -0.253 -0.253 0.618 0.000 -0.354 0.494 0.676 0.000 0.000 9.4630615 7.9273869 6.5889080 13.5022567 8.0930388 5.9969920 7.3642012 -0.1115392 10.7684339 11.3972530 8.8117953 6.5608938 9.3972530 10.7840431 11.2249744 9.4363264 10.8912828 9.6163882 9.1458557 12.1552544 6.3883135 12.1990806 3.0583858 5.6027122 3.2103889 8.4334323 10.197376 11.076438 12.377563 9.292545 7.669828 9.875732 6.865748 7.981225 11.964949 13.110130 10.261333 13.138248 6.669828 11.655825 9.000907 11.022252 4.503177 14.334840 6.764984 11.404660 10.431500 10.202485 9.861448 10.056513 13.204396 8.512349 7.246019 9.130451 11.435121 2.975924 4.910833 10.082609 10.185384 12.488148 12.417410 10.787069 8.861448 8.621483 11.340709 12.922579 7.612982 9.471551 10.561335 8.185384 11.4068751 11.0902855 2.6958157 8.3903048 11.6303561 10.3036814 8.8088207 9.0228940 9.7787321 13.5022567 8.9572460 7.8162458 10.0100014 10.0260994 9.0035114 10.8188356 11.6649009 8.4883250 14.3526945 8.5050168 9.6942118 8.5608934 10.0918158 6.7832851 10.2580652 11.9876512 11.3962625 10.6934055 9.9739403 9.7787321 8.8425914 9.6998426 11.3031531 9.5269037 12.4183595 NA 9.6566522 8.6095670 10.1196891 10.8155050 12.1310465 11.0222523 9.4002205 9.9149912 10.5945321 9.2999789 9.9686191 10.0039082 3.6958268 9.7703466 NA NA 8.9205136 0.4734233 9.4285959 7.1784866 11.5357014 8.9746042 11.0637055 9.9294425 0.8884608 10.8621652 13.6949671 10.1393583 10.5582387 10.5155457 10.1893923 8.7022489 5.3642012 10.2662206 9.7963424 0.4734233 9.2999789 12.3151257 9.5422087 10.5273562 6.8073304 6.2978590 12.6749417 10.3606509 11.2449198 11.5705846 10.3833234 11.4955669 10.3015668 9.1399503 10.6219069 11.1000520 9.8184659 5.4583229 0.4734233 8.2348486 7.5502458 14.2029449 9.3560734 8.5377239 4.1738710 8.7498031 9.4715506 7.8397524 7.7741644 7.8103088 11.6180886 5.0782939 9.6796307 TCGA-AF-2691 48 0 NA 1309 rectum stage i t1 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 42.51.0 2 2 1 NA NA NA 4 3 5 3 NA NA 7 0 0 4 4 0 0 4 0 0 0 0 0 0 4 7 0 0 0 4 4 0 0 4 0 0 0 0 4 2.01147e-06 4.855272e-07 7.969654 10.689776 12.391839 7.964492 8.840371 9.641271 4.969652 NA 11.002762 1.840363 7.540811 10.084735 10.383403 10.194179 10.150984 10.820489 0.01546100 0.01546100 -0.19023000 0.21071000 -0.41552000 -0.41552000 0.48856000 -0.00085067 -0.20708000 -0.23896000 -0.19085000 -0.19085000 0.66957000 0.66957000 0.66957000 -0.21743000 0.00167760 -0.01806500 -0.01806500 -0.01554100 0.99366000 0.99366000 0.99366000 -0.00649170 -0.32134000 0.01546100 0.01546100 0.00556620 -0.42111000 0.01657900 -0.19062000 -0.18746000 -0.18746000 -0.19023000 -0.19023000 0.17908000 -0.21120000 0.02793600 -0.41552000 0.00000000 0.00473230 -0.20944000 -0.19085000 -0.19085000 0.02035600 0.01094900 -0.21706000 -0.21706000 0.00167760 0.00167760 -0.43679000 -0.19657000 -0.19657000 -0.01554100 0.01043800 -0.08621000 -0.01338900 -0.00649170 0.000 0.000 -0.209 -0.209 -0.191 -0.191 0.670 0.000 -0.217 0.000 0.000 -0.419 0.000 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.983 0.000 0.000 0.000 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7.911833 11.889879 11.224615 2.425325 7.969654 11.187438 10.689776 8.871038 8.324186 8.744253 15.051276 8.093036 8.166800 10.818366 8.030195 9.204505 10.719188 10.939061 8.414548 14.014126 8.895653 8.344196 10.591078 9.715352 8.219749 6.873794 11.385335 9.992656 11.010296 10.035128 9.578463 7.764352 9.069190 10.698352 9.748763 12.185011 -1.759258 8.992656 9.299741 9.955415 8.417800 12.486930 9.208877 8.202314 9.076385 8.224075 9.730635 10.095399 8.537929 6.107156 9.083545 4.088294 NA 7.654152 NA 9.554616 5.673260 11.557190 8.946279 10.196823 9.793112 1.840363 10.688211 13.312554 9.873794 11.002762 10.545139 9.719954 8.631534 6.162299 10.217581 10.004788 2.162307 6.873794 12.629904 9.751913 10.481519 7.505707 5.698352 12.932467 11.366381 11.128083 10.915181 10.194179 11.430022 11.156652 8.762212 10.834236 11.030813 10.150984 5.010296 1.840363 8.013598 6.608555 13.602026 9.266635 8.526871 1.425352 8.799648 9.340217 2.647729 7.788738 7.901067 11.485128 4.595259 7.356071 TCGA-AF-2692 54 0 NA 412 NA stage iia t3 n0 m0 25-9-2014 female 2009 NA NA NA yes r0 0 white not hispanic or latino 42.51.0 1 3 1 NA NA NA 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 4 0 0 0 0 0 0 6 0 1.005735e-06 3.468052e-07 9.304990 11.248361 12.006135 8.560371 9.780569 10.372105 3.005777 1.590722 10.097218 3.813135 8.155530 10.429949 10.471349 9.892790 9.720028 11.572312 0.5874900 0.5573600 0.0388490 -0.5467800 -0.5247500 -0.5247500 0.1491100 -0.2093900 1.6557000 -0.5440600 -0.5509000 0.0279960 0.8348200 0.8348200 0.8348200 -0.3083200 0.0211200 0.0347540 0.5499200 0.0047500 0.0569800 0.0569800 0.1735500 -0.6005600 -0.5416300 -0.5353300 -0.5253700 0.0041715 -0.0137380 0.0103390 0.0305280 -0.5358400 -0.5517500 0.0076348 0.0388490 -0.5467800 -0.5356600 0.0195790 -0.5753800 -0.2069000 -0.2093900 -0.5440600 -0.5509000 0.0180110 -0.4606100 -0.5339200 -0.3182500 -0.3182500 0.0264500 0.0000000 -0.5535100 -0.5335200 -0.5335200 0.0160830 0.0569800 -0.0649720 -0.5721400 -0.6005600 -0.209 -0.209 0.000 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11.025373 1.005759 4.175708 10.348968 10.466238 12.322064 13.573025 11.206681 10.078585 8.909664 10.975831 13.517041 6.971567 9.489598 9.854405 8.145334 11.848525532 11.133776705 NA 9.304990324 11.204841196 11.248361028 9.304990324 8.210353307 9.244139266 15.715007012 7.733702769 8.055631135 10.904383765 8.341172757 9.309563209 11.105130134 10.991624305 9.570503537 13.966870243 8.423634893 9.552676782 10.461109620 10.179459546 9.404525952 5.706221094 11.546878982 9.817959591 10.534236437 10.237003522 10.391644760 9.236090990 9.082598017 10.646027254 10.376469793 12.745929924 3.175700237 9.350078168 9.248408648 10.250146204 8.790417249 12.290317294 9.163129357 7.869968232 8.485562476 8.234600951 9.495630413 9.609408701 9.173200406 10.776446275 8.583211043 NA NA 7.773966664 1.005759269 10.267877166 4.649638450 11.501637383 9.210353551 9.541057691 10.576586758 1.005759269 10.626002192 13.502636130 9.564203042 10.097217705 10.750616218 9.740491995 8.983062286 3.327716103 10.421524075 10.227079435 NA 6.448725888 12.629435265 10.679974578 10.346745078 7.965436842 6.398098930 12.395682521 10.516546483 10.317530648 10.428898309 9.892789746 12.344240197 10.708820760 8.389486794 10.464496537 11.763589012 9.720027881 1.590721770 2.813134719 7.551828209 4.706221094 13.946004171 9.495630413 8.663993871 0.005759269 9.068179314 9.489598126 2.005795193 8.210353307 7.145334061 11.926879442 4.175708220 7.656833837 TCGA-AF-2693 75 0 NA 581 NA stage i t2 n0 mx 25-9-2014 male 2009 NA NA NA yes NA 0 white not hispanic or latino 122.34.0 NA NA 2 2 NA NA 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.965316 10.618982 12.217773 7.913172 9.318138 13.695427 3.183963 -1.208228 11.255929 3.649615 8.129261 10.408188 9.988241 9.681751 10.483818 10.808447 0.1565100 0.0788080 0.0124340 1.1635000 -0.6434000 -0.0330350 0.0066653 -0.0020784 0.0031078 -0.4559700 0.6410300 3.6569000 1.6083000 1.6083000 1.6984000 -0.0192640 -0.0341070 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3.435495 10.435946 9.735619 7.081658 4.572999 9.193585 10.650785 11.888354 8.928630 11.012622 9.382226 8.713480 6.259244 4.039568 12.381641 1.376624 5.686456 8.481637 7.495542 10.0519703 10.5118831 11.8641064 9.7334201 8.5465264 10.3586442 7.6589177 5.5058846 12.3088161 13.2505580 10.0198563 13.3475460 6.9665643 12.2177725 4.2834922 8.6788596 1.3766238 14.3955838 4.2834922 11.5176440 10.0240598 10.7789028 13.6954265 7.8550341 13.5303117 8.5331058 8.6558251 10.8391036 10.7067712 -0.2083943 -0.2083943 9.9746538 10.7019068 12.0127727 12.9997207 11.1155380 8.9401154 8.8000674 12.0286994 13.7076115 7.3989694 9.1828825 10.9001632 7.5957699 11.7158946 11.1445099 -0.2083943 8.9653159 11.1595995 10.6189815 9.4498502 9.4912114 8.6292666 15.0172980 7.7516405 7.7545348 10.9286299 8.9183433 8.9640665 10.6082226 11.5078152 9.5393870 14.4756751 8.1491908 9.3083238 10.0306405 9.5448555 8.0724097 8.4868672 12.0803607 10.2500454 10.7828064 10.0897014 10.1191914 9.1886610 9.4480636 10.9083076 10.3161805 12.7236958 NA 9.2459382 8.8563816 9.5347902 9.2335456 12.7430146 8.6788596 8.8264379 7.8056594 8.5680720 9.8876951 10.4877370 10.0448954 7.8657803 8.5498620 NA NA 7.3152012 NA 9.3662324 5.4498519 11.4309795 8.9092820 10.6324167 10.0071718 1.5989845 10.5799494 14.0776189 9.7171933 11.2559293 11.0243595 10.2954645 8.4155204 3.3152039 9.9653159 10.8976324 -0.2083943 8.3423854 12.4443718 9.7859922 10.5787252 7.9027743 6.0954202 12.7090109 10.4269034 10.9534006 10.8070539 9.6817511 11.9034266 10.3078313 8.6758092 10.4574188 11.1289820 10.4838184 2.8790980 0.7916057 8.6327157 5.1839549 14.1524859 10.2704084 9.4569747 1.3766238 9.4781568 9.1828825 -0.2083943 7.3073384 6.5263490 11.9058692 4.8791029 6.3840964 TCGA-AF-3400 54 0 NA 387 rectum stage iia t3 n0 m0 25-9-2014 male 2009 NA NA rectal mucinous adenocarcinoma no r0 0 white not hispanic or latino 42.51.0 2 2 1 NA 1 2 4 3 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 4 6.936103e-07 4.161662e-07 8.461270 10.074170 10.273224 7.919969 8.064917 10.300509 2.299391 1.977463 10.777546 4.732340 7.914093 10.412083 10.704524 10.214342 8.878321 10.550155 0.0495580 0.0495580 0.0233030 -0.1053700 -0.1776300 -0.1776300 0.2364500 -0.1576900 -0.0406420 -0.0406420 0.2613900 0.2489500 0.0474280 0.0474280 0.0691130 0.2668900 -0.0564250 0.0414760 0.0414760 0.0272340 0.0482800 0.0482800 0.0482800 -0.0059347 0.0087704 0.0087704 0.0495580 0.0454420 -0.1365800 -0.1138900 -0.1613900 -0.1613900 -0.1613900 0.0233030 0.0233030 -0.1053700 -0.1968500 0.0979970 -0.1945400 -0.1644500 -0.1576900 -0.0406420 0.2613900 -0.1222400 -0.7207400 -0.0335240 0.2545100 -0.1592300 -0.0564250 -0.0564250 -0.3102500 -0.1691100 -0.1691100 0.0272340 0.0482800 -0.0577720 -0.0287470 -0.0059347 -0.158 -0.158 0.000 0.000 0.249 0.127 0.000 0.000 -0.158 0.000 0.000 -0.310 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.137 -0.137 -0.161 -0.161 0.000 0.000 -0.146 -0.146 0.000 0.000 0.056 0.233 0.283 0.283 0.000 -0.158 -0.158 0.000 0.000 0.249 0.127 0.000 0.000 -0.158 0.000 0.000 -0.310 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.137 -0.137 -0.161 -0.161 0.000 0.000 -0.146 -0.146 0.000 0.000 0.056 0.233 0.283 0.283 0.000 9.912620 8.248918 5.649880 14.421644 8.281236 3.299377 7.317305 9.541604 10.864675 10.805591 9.713857 4.501019 10.563356 10.311728 10.299383 9.111881 10.332806 8.925822 7.508836 10.538743 5.592164 11.467804 2.562426 7.516613 6.021848 8.326183 9.83543558 9.66395510 11.14800569 7.98307911 8.06491733 9.37405941 6.36977181 5.70537527 11.04556112 13.19783296 9.91261963 13.29585622 6.64987983 10.27322354 10.36762355 10.48722967 3.43688141 14.05877162 3.97745395 12.29260419 9.80241345 9.86467522 10.30050941 9.99982247 13.26170039 9.25590407 9.15487430 12.59927757 10.58478497 3.97745395 -0.02253689 11.03747502 10.28465548 11.91409256 10.37084507 11.20867582 8.52048629 8.20627350 10.66306197 13.27451419 7.05427002 9.07285156 9.56804161 7.37833388 12.0898941 10.7481185 0.9774631 8.4612703 10.6613265 10.0741698 8.1722115 8.5661694 9.2277531 14.4216439 5.4693064 6.7323425 11.5894016 10.0556054 8.3910824 10.6908412 11.9425174 9.2951385 14.4914906 9.0833631 8.6813583 9.6427905 9.7239689 7.7848095 4.6213134 11.5921645 9.8055911 8.8992956 9.7555317 9.8431879 8.6339869 9.4286658 10.4592540 9.1795785 12.2901363 NA 9.4099965 9.0378264 10.5801535 9.9647186 10.4773005 10.4872297 8.2014565 10.7356779 8.3868454 9.1869081 10.2732235 8.8558122 5.8843464 8.9774545 1.5624256 NA 9.1144456 NA 8.7053749 7.7390056 11.8047973 8.6534115 10.3794008 9.9590220 2.2993912 10.5995065 13.2454117 11.0529338 10.7775456 10.3005094 10.0435438 9.0622631 3.8843439 9.8213757 9.9316510 NA 4.7323398 12.5827026 10.1628132 10.9104075 6.7976330 6.1067378 12.9698620 11.5796895 11.2749441 11.2959974 10.2143418 11.2483339 10.1746713 8.3611591 10.9447169 10.8707562 8.8783213 3.1473718 0.9774631 8.6567588 1.9774631 14.5305439 8.9970454 8.7155468 1.9774631 8.6536939 9.0728516 NA 7.8354359 7.1869076 11.5049316 5.4037211 8.5624172 TCGA-AF-3911 48 0 NA 1148 rectum stage iiic t3 n2 mx 25-9-2014 male 2009 NA NA rectal adenocarcinoma no NA 9 white not hispanic or latino 122.34.0 NA NA 2 1 NA NA 1 1 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4455686 10.7217993 12.2832627 7.6087738 9.0241174 10.1875996 1.5765705 0.4066455 11.3088365 2.4066455 8.1088224 10.5624167 9.2862331 9.2520459 9.9208707 11.5471601 0.0084743 0.0073609 -0.5231700 0.5475300 1.8844000 -0.0140900 1.3069000 0.0081959 -0.0091286 -0.0234960 0.5546000 0.5546000 1.8882000 1.8882000 1.8154000 -0.5472700 0.5088000 -0.0042929 -0.0042929 -0.0478010 1.0657000 1.0657000 1.4219000 -0.0083005 -0.0091000 -0.0091000 0.0084743 0.0263730 0.0151680 0.5308500 -0.5384500 -1.0689000 -0.5172600 -0.5231700 -0.5231700 0.5427700 -0.5348000 -0.0012473 -1.1472000 0.0081959 0.0081959 -0.0152070 0.5546000 0.0000000 -0.5194500 -0.5372600 -0.5436100 -0.5472700 -0.0138150 0.5089800 -0.5791000 -1.0955000 -1.0841000 -0.0478010 1.0657000 -0.0062286 -0.0602110 -0.0083005 0.000 0.000 0.000 0.000 0.536 0.000 1.815 -0.537 -0.547 0.509 0.509 -0.575 0.000 -0.558 -1.084 0.000 0.000 0.000 0.000 1.066 1.335 0.000 0.000 0.000 0.000 0.531 0.531 -0.494 -0.494 0.487 -0.523 0.548 0.025 1.425 0.000 -1.103 0.929 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.000 1.815 -0.537 -0.547 0.509 0.509 -0.575 0.000 -0.558 -1.084 0.000 0.000 0.000 0.000 1.066 1.335 0.000 0.000 0.000 0.000 0.531 0.531 -0.494 -0.494 0.487 -0.523 0.548 0.025 1.425 0.000 -1.103 0.929 0.000 0.000 0.000 6.999107056 5.161537041 4.134574176 14.958852836 9.417876981 4.728579044 9.340340391 1.866077126 10.361209632 9.000974335 6.043274503 4.451046223 9.666981285 10.347697432 11.612901110 10.002839623 11.191693540 10.033271428 8.811791144 7.551308365 4.021355352 11.178139273 -0.008391992 5.277013948 6.264630256 7.744271447 9.131164 10.844662 12.507394 9.218025 7.613664 10.036917 7.475428 4.383932 12.759107 12.848103 9.452409 12.994955 6.664038 12.283263 5.728579 9.046895 1.728574 14.511658 4.882384 12.164352 9.320287 10.206741 10.187600 7.453774 12.652203 8.943868 8.584069 10.301089 10.114009 2.107085 2.654573 8.897501 10.228025 11.451556 12.578687 11.213401 8.879341 9.203501 11.887566 13.516684 7.337387 11.038054 10.323276 7.656948 11.536415812 11.169031870 1.214000430 8.445568635 11.229618924 10.721799341 9.112282327 9.247427704 8.939005842 14.958852836 8.382497799 7.941924991 10.482128994 8.827662809 8.926286209 10.602637074 10.376396100 9.132126958 14.345930581 9.200253232 9.149801220 9.859405885 9.993958480 7.488798565 5.635467100 12.224932401 11.138393086 11.070207906 9.749835580 9.975081001 8.840881756 9.763651915 10.769415550 9.065753779 12.669653405 NA 9.165705717 8.823447494 10.080400511 7.467345516 11.847129714 9.046894808 8.841278139 8.805393392 8.641467274 9.771878648 9.665804539 8.123452036 6.812939694 9.640868523 1.576570509 NA 6.586559101 -0.008391992 8.973655182 5.214004317 11.489796693 8.968892251 10.284317362 9.967460299 1.576570509 10.654873893 13.620247712 9.374596560 11.308836492 10.806728679 9.718965534 8.939979646 4.692053308 9.365202598 11.030314143 2.798962930 5.188009179 12.901942750 9.176487590 10.151483658 7.453773534 6.245853098 12.933087913 10.900505259 11.210175568 11.544441482 9.252045887 11.735745381 10.334798081 8.465994456 9.821335049 11.499076610 9.920870733 0.406645508 -0.008391992 7.865630593 5.849594007 13.903035511 9.864030721 8.409464766 -1.593354492 9.046768240 11.038054279 6.440073494 7.334427939 7.786028450 11.892479142 5.586557600 7.331462490 TCGA-AF-3913 60 1 316 NA rectum stage iv t3 n1 m1 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 1 black or african american not hispanic or latino 46.49.0 3 4 3 NA 2 1 4 4 1 3 NA NA 6 0 0 0 0 0 0 4 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 4 0 0 0 0 4 2.843802e-06 1.040415e-06 7.974298 9.897739 11.694344 7.577638 8.478429 8.866315 2.273844 1.273874 10.895909 3.733289 8.613708 10.147302 9.174724 9.236754 9.315517 12.617038 -0.0090676 0.0035900 -0.0604760 1.5443000 -0.6856200 -0.0873310 0.5774400 -0.0780280 0.5049600 0.5028800 -0.0459230 -0.6364300 0.9409600 0.9409600 1.7729000 0.0024792 2.7502000 -0.0121800 -0.0553870 2.3172000 0.5505100 1.7795000 2.0617000 0.1567500 -0.5866800 -0.0090676 -0.0090676 -0.0100710 0.0000000 0.9477000 -0.0914360 -0.0999610 -0.1106500 -0.1125800 -0.1471000 0.5129600 0.4532400 0.9780900 -0.7492600 -0.0780280 -0.0569750 0.5028800 -0.6364300 -0.0897160 0.0137540 -0.0410410 -0.0239940 0.0024792 -0.0686100 0.4250000 -0.0121800 -0.7250400 -0.7241500 0.0201850 -0.2522600 -0.0865660 0.0187850 0.1567500 0.000 0.000 0.505 0.505 -0.524 0.000 0.872 0.000 0.000 0.000 0.422 0.000 0.000 -0.724 -0.724 0.000 0.000 0.000 0.000 0.327 0.745 0.000 0.000 0.000 0.240 0.000 0.978 0.000 0.000 0.000 0.000 0.475 0.475 0.978 0.978 -0.246 0.493 0.954 0.954 0.157 0.000 0.000 0.505 0.505 -0.524 0.000 0.872 0.000 0.000 0.000 0.422 0.000 0.000 -0.724 -0.724 0.000 0.000 0.000 0.000 0.327 0.745 0.000 0.000 0.000 0.240 0.000 0.978 0.000 0.000 0.000 0.000 0.475 0.475 0.978 0.978 -0.246 0.493 0.954 0.954 0.157 6.4833111 5.3613192 2.5957901 14.9870347 9.2625424 3.4437790 8.3875999 0.2738142 10.3003810 8.0287448 4.5217857 3.5957901 9.7188724 9.4636821 11.8784109 9.2738576 11.4990650 7.7657104 8.4587331 9.5098718 3.9742999 12.8110760 NA 7.9603582 5.3613192 7.9742976 9.077989 10.273858 12.169812 8.991534 7.674737 9.318252 6.001777 3.595790 12.471996 12.422334 9.285085 12.899795 6.611034 11.694344 6.106748 9.116208 1.273874 14.722748 3.595790 12.324046 9.622586 9.761698 8.866315 8.100406 12.344649 8.535953 8.526523 10.106748 10.330495 1.273874 3.733289 8.967344 10.203116 11.217105 12.016167 10.872841 8.488905 8.131838 11.781613 13.136495 6.106748 9.233860 10.998371 7.285085 12.3849933 10.9032143 0.2738142 7.9742976 10.8663146 9.8977391 8.4636821 8.5074771 7.7576734 14.9870347 7.7576734 7.2045946 9.9195160 7.6314099 8.5122624 10.6358014 10.5661793 9.3298992 14.1413294 9.5241560 9.0486446 10.1565007 10.5957857 8.2682112 4.2738590 11.9953841 9.9445138 10.7983993 9.4031405 9.6832485 8.0744343 9.7576734 11.0237271 9.0650205 12.4488862 NA 9.0017780 8.9097572 9.0552174 6.7816522 13.4551652 9.1162080 5.9462840 9.5799193 8.5912703 10.0270744 10.1473017 8.2454011 6.5592593 8.9141025 NA NA 6.7657111 NA 8.4487833 4.8588215 11.4759814 9.2682110 9.8418137 9.3345535 0.2738142 10.5394726 13.2161888 9.5730656 10.8959094 10.0486446 9.6488970 9.3771454 4.3613192 9.2682110 10.8500396 NA 3.8588165 12.6840439 9.3692547 10.3223445 7.3182518 5.2738590 12.5589708 10.4574930 11.1496070 11.1473017 9.2367535 11.5008718 10.5924004 7.7895571 9.7067127 11.1099079 9.3155166 NA 0.2738142 8.8038347 5.8284463 13.7413358 8.9603582 8.0747575 0.2738142 8.8634340 9.2338595 0.2738142 6.9320694 7.7250690 11.2871803 2.8588165 7.2962252 TCGA-AF-3914 39 0 NA 1146 rectum stage iiib t3 n2a m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma no r0 5 white not hispanic or latino 46.49.0 NA NA NA NA 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AF-4110 77 0 NA 441 NA stage iva t4a n2b mx 25-9-2014 male 2010 NA NA NA yes r0 21 white not hispanic or latino 122.34.0 NA NA 2 2 NA NA 2 2 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.565336 10.665981 11.822413 8.014063 7.654477 10.521883 2.983550 -1.264305 10.949325 2.195033 7.453290 10.428665 10.055850 10.193456 10.141819 9.570085 0.4247800 0.3912300 0.0188800 0.3732400 0.0578750 0.0578750 0.0578750 0.0309510 -0.2617300 -0.2617300 0.4555700 0.4384300 1.2865000 1.2865000 1.1396000 -0.3266800 0.0422440 -0.2065300 -0.2065300 -0.2226900 1.4981000 1.4874000 1.4874000 -0.0621520 -0.6004900 -0.2532600 -0.2575000 0.0049346 -0.2757700 -0.2661800 -0.3134700 -0.3134700 -0.3134700 0.0000000 0.0000000 -0.2449000 0.3117000 0.3194700 0.0578750 0.0309510 0.0309510 -0.2617300 -0.2286400 -0.2368500 0.0172010 0.0172010 -0.3261700 -0.3266800 0.0422440 0.6127200 -0.5450600 -0.5742200 -0.5792200 -0.2226900 -0.6139700 -0.5763900 -0.2729000 -0.0621520 0.000 0.000 -0.262 -0.262 -0.237 -0.237 1.151 0.000 -0.327 0.000 0.000 -0.545 -0.171 -0.574 -0.574 -0.223 -0.223 -0.253 -0.253 -0.598 1.487 -0.576 -0.273 0.000 0.000 -0.270 -0.270 -0.313 -0.313 0.000 0.000 0.067 0.312 0.345 0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.262 -0.262 -0.237 -0.237 1.151 0.000 -0.327 0.000 0.000 -0.545 -0.171 -0.574 -0.574 -0.223 -0.223 -0.253 -0.253 -0.598 1.487 -0.576 -0.273 0.000 0.000 -0.270 -0.270 -0.313 -0.313 0.000 0.000 0.067 0.312 0.345 0.345 0.000 0.000 0.000 0.000 0.000 7.571664 5.689811 4.666353 14.940108 9.143943 4.290203 8.374050 6.170242 10.791574 10.412893 7.552598 5.320575 9.497165 10.228969 11.875804 9.940796 10.495086 9.137560 8.233465 8.180629 4.350320 12.065970 2.436055 7.780008 7.612131 7.470323 10.246872 10.937125 12.382960 9.995945 7.274772 9.780691 6.127930 7.331804 12.204110 12.864575 9.670042 12.994768 6.678128 11.822413 7.301668 9.596701 3.379468 14.726072 5.974018 11.750332 9.452433 10.160305 10.521883 8.833646 12.616632 8.945067 8.751029 12.061060 10.334131 1.905543 2.320571 10.379470 10.686534 11.863930 12.834304 11.241425 8.342944 8.813765 11.936666 13.596216 7.025632 9.993591 10.701759 7.182697 11.9383498 11.0015217 1.5429514 8.5653363 11.1757042 10.6659814 8.8738855 8.8700401 9.0267843 14.9401080 8.6795938 7.2825084 10.5545953 8.7257176 9.1712839 10.3951637 11.1179675 8.7079185 14.1618129 8.6213101 8.7200322 9.9432382 10.7531181 7.2473665 10.7565936 11.5988320 10.8010298 9.7050002 10.0365382 9.9511467 7.9020030 9.1566267 11.0120290 9.7976599 12.1579427 NA 9.1795932 9.1723252 9.7164673 10.5645436 13.0570486 9.5967006 7.4804477 9.0942648 9.0462264 9.6372349 10.4631088 9.1276413 7.6182570 9.3956095 -1.2643045 NA 8.0843418 NA 9.5850189 6.4009494 11.7134303 8.8164311 10.7164673 9.7006764 0.7356088 10.2669952 13.9016591 10.0047404 10.9493255 10.5549945 9.8590886 8.8571472 4.6663533 10.8349615 10.7297302 2.1950326 9.8777208 12.8007774 10.2339643 10.5120467 6.9406742 5.6059772 12.7379892 10.6067489 11.0707249 11.0801870 10.1934562 11.3801460 10.2596656 8.8648968 10.2969016 11.1770017 10.1418187 2.9835500 -0.2643045 8.7432999 3.9835409 13.8868285 9.3530811 9.1139086 3.3205713 8.9918106 9.9935907 6.3355261 8.3758588 8.5397447 11.5363114 4.8441396 7.5716639 TCGA-AF-5654 73 1 512 257 rectum stage i t2 n0 m0 25-9-2014 female 2010 257 NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 102.35.0 NA NA 1 NA 3 3 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6473840 11.1144476 11.5833427 8.2198955 9.3288775 10.6429729 -0.8780563 NA 10.6261857 3.7657151 7.1717122 10.7562205 10.2684319 9.9775727 10.3650372 11.1631801 0.00027728 0.00027728 -0.01412600 -0.00166290 -0.01532900 -0.01532900 0.69727000 0.00021988 0.70288000 -0.00263220 0.59134000 0.59134000 3.65690000 -0.01958900 -0.00235530 0.00903120 -0.00729190 0.00722170 0.00722170 -0.01670400 0.69241000 0.69241000 0.69241000 0.11360000 0.00986690 0.00986690 0.00027728 0.56792000 -0.00214430 0.00343020 -0.00267940 0.00000000 -0.00304750 -0.00622860 -0.01412600 -0.00166290 -0.02274400 0.60539000 -0.01532900 -0.62979000 0.00021988 -0.01271300 0.59134000 0.59134000 0.00221930 -0.01064600 0.00833510 0.00833510 -0.00729190 -0.00346270 0.00722170 -0.00595220 -0.00595220 -0.01670400 0.71773000 0.00499690 -0.01629200 0.11360000 0.000 0.000 0.000 0.000 0.591 0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.692 0.000 0.000 0.568 0.568 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.634 0.000 0.000 0.000 0.000 0.114 0.000 0.000 0.000 0.000 0.591 0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.692 0.000 0.000 0.568 0.568 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.634 0.000 0.000 0.000 0.000 0.114 4.876753 3.581291 3.209329 15.883115 8.144231 3.979842 8.747572 3.209329 10.013647 7.138671 4.548128 3.645425 9.249857 11.064378 13.021975 9.394493 11.450538 10.372754 9.201348 1.443766 2.443792 12.291162 2.291780 6.822303 7.527005 6.909766 9.3325345 10.4661592 12.2514682 9.9179028 8.0466755 10.2479223 6.3506811 4.0287548 13.1589812 13.2089116 9.2040123 13.3330671 6.7580526 11.5833427 3.5141854 7.6097033 1.4437658 13.2975687 4.6137143 13.1904736 10.3821947 10.2955404 10.6429729 5.8633314 12.6762123 8.9276070 8.5955689 9.3288775 10.2836249 0.1218112 1.1218774 8.7566744 9.9259942 11.6651368 13.2267895 11.2779463 8.0733227 9.1539089 11.8068310 12.8201338 6.9356448 9.2225257 10.0804160 8.2066715 12.0145958 10.6668277 NA 8.6473840 11.1768066 11.1144476 9.4313396 9.3276564 9.4358800 15.8831154 8.8582652 6.9356448 11.0451907 8.3434505 9.3203082 10.1539089 11.7234019 9.5435599 14.3197326 8.7530402 9.4958159 9.6783693 10.4832587 8.9922280 3.9292134 12.5726879 10.8283592 10.3798403 9.9736123 9.6473841 8.9555915 9.7773939 10.9032229 10.6821961 11.7456602 NA 8.5012417 9.1470029 10.2911619 5.1662575 13.0613506 7.6097033 6.0643785 8.4617131 6.9673531 8.9308275 9.8421075 9.9081329 11.5619538 8.7217759 NA -0.8780563 6.4256439 3.7657151 9.8809192 3.7657151 11.3036367 9.6286666 10.2146204 12.4392758 0.1218112 10.1621530 14.5139458 8.7729150 10.6261857 10.4466063 9.6227051 8.3816065 3.1218609 10.5756482 10.3884272 NA 4.6764536 12.6155936 10.5559702 10.1323914 7.2040125 5.6454250 13.6864296 11.2927272 11.5200725 10.4324760 9.9775727 11.9272041 9.9515859 8.1190428 10.3428460 11.0109869 10.3650372 NA NA 7.3364735 5.2303875 13.4428753 9.9697035 8.7530402 NA 8.9589708 9.2225257 1.1218774 8.3554828 7.5227424 12.3833705 4.7942911 6.1986788 TCGA-AF-6136 72 0 NA 468 rectum stage iiib t3 n1b mx 25-9-2014 female 2011 NA NA rectal adenocarcinoma no NA 2 white not hispanic or latino 139.38.0 NA NA 2 3 3 3 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.010398 11.044693 11.473499 7.947545 9.455864 10.154914 3.329167 NA 11.330216 4.136511 7.883748 10.504709 9.584188 9.432565 10.509690 9.031332 0.2547200 0.2547200 -0.2333100 0.3732300 0.0191670 0.0191670 0.0275700 -0.0853890 -0.3559500 -0.3358900 -0.2418600 -0.2418600 1.2413000 1.2413000 1.2413000 0.0000000 0.3882500 -0.3346200 -0.3346200 0.0357370 0.7119900 0.7119900 0.7119900 -0.0069867 -0.3070200 -0.3070200 -0.2435600 -0.3290700 0.0329170 0.0329170 -0.3623200 -0.3546400 -0.3542400 -0.2333100 -0.2333100 0.3732300 0.3732300 0.3630500 -0.3867700 -0.0853890 -0.0853890 -0.3262900 -0.2418600 -0.2418600 0.3498200 0.3498200 0.0213950 0.0000000 0.3882500 0.3882500 -0.3346200 -0.7669100 -0.7747700 0.0357370 0.0825500 -0.7818800 -0.3431400 -0.0069867 0.000 0.000 -0.326 -0.326 -0.242 -0.242 1.241 0.350 0.000 0.388 0.388 -0.335 -0.335 -0.384 -0.720 0.000 0.000 -0.244 0.002 0.000 0.629 -0.331 -0.343 -0.061 0.268 0.000 0.000 -0.354 -0.354 -0.233 -0.233 0.373 0.373 0.386 0.386 -0.387 0.000 0.000 0.000 0.000 0.000 0.000 -0.326 -0.326 -0.242 -0.242 1.241 0.350 0.000 0.388 0.388 -0.335 -0.335 -0.384 -0.720 0.000 0.000 -0.244 0.002 0.000 0.629 -0.331 -0.343 -0.061 0.268 0.000 0.000 -0.354 -0.354 -0.233 -0.233 0.373 0.373 0.386 0.386 -0.387 0.000 0.000 0.000 0.000 5.259898 5.136515 3.416624 15.807202 9.440295 4.721477 8.593602 2.788581 10.748066 8.588903 4.914124 3.651086 9.067252 10.125199 12.025693 10.756996 11.202219 9.511554 8.162050 5.187142 3.499080 12.257123 NA 6.695482 7.817000 7.586548 9.5567756 10.3932287 11.4523111 9.8270116 8.5065793 9.9829005 6.5865471 5.5386127 11.3178443 12.6988933 9.6454412 12.8706193 6.7721034 11.4734993 3.0295942 8.4271917 1.9141052 14.0886838 5.5579798 11.9178743 9.8409123 9.7150221 10.1549135 6.7967652 12.2902476 9.4877693 7.9548686 11.5498403 11.0037934 0.9141052 1.9141052 10.3871514 10.0706267 11.7832019 11.2472775 11.3368878 9.3885041 9.4192722 12.0263444 13.5518791 6.6329400 9.9141221 11.2753349 8.0807035 12.2452257 10.8741241 NA 9.0103980 11.3605163 11.0446927 9.5675645 9.2598969 9.0807038 15.8072020 8.1557083 8.2746037 9.4019621 8.3680786 9.0536734 10.4532810 11.5090688 9.8531528 13.6572034 8.5651737 8.8290056 10.5003365 11.0587804 7.4271921 7.5189843 11.2862617 9.8692877 10.2254921 10.0425461 9.6488318 7.4639967 8.8309968 10.7695098 10.8624894 12.3039058 NA 8.7193286 9.1104209 9.5818252 8.5015872 12.7471440 8.4271917 7.4429020 7.2179025 7.7512247 9.9837957 10.7316388 9.5325077 7.8875801 8.9103603 NA NA 6.7385503 0.3291810 9.7449014 5.0015861 11.2220819 8.9364898 10.0434052 9.5263764 NA 10.4172853 13.5828594 9.1365147 11.3302159 11.1956659 9.5912545 8.0840473 4.6510861 10.4079776 10.3443099 1.3291810 7.2716740 12.8021043 9.5770872 10.4039701 6.8369542 6.1620489 13.0013640 10.5918418 11.0011429 10.8532116 9.4325655 11.6519328 10.1405343 8.0121541 10.6965744 11.0756740 10.5096905 2.4990933 1.6510861 8.2196066 1.6510861 13.6845796 10.2270052 9.5386130 -0.6709338 8.7095774 9.9141221 NA 8.0156604 7.7637880 11.7279034 3.1365195 4.2360486 TCGA-AF-6655 66 0 NA 609 rectum stage iiia t2 n1 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 2 white not hispanic or latino 139.38.0 NA NA 4 2 2 2 1 1 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.774888 11.194461 11.457728 8.209365 9.212121 10.128525 3.879137 NA 10.477906 1.986047 8.307981 10.670050 9.866948 9.615659 10.455985 11.010005 -0.00152430 -0.00152430 0.26435000 -0.01491600 0.49459000 0.49459000 1.49770000 -0.02013800 0.55195000 -0.01188700 0.02244400 -0.00595220 0.53274000 0.53274000 0.51300000 0.00069327 0.36100000 0.01936300 0.01936300 0.01237600 1.33200000 1.33200000 1.33200000 0.15114000 -0.00152430 -0.00152430 -0.00152430 -0.01548100 0.35169000 0.54735000 -0.02205800 -0.02205800 -0.02205800 0.26435000 0.26435000 -0.01491600 -0.01491600 0.52643000 -0.62884000 -0.02013800 -0.02013800 -0.03013100 -0.56634000 -0.00526100 -0.01230000 -0.01230000 0.00069327 0.00069327 0.36100000 0.33354000 -0.59312000 -0.59993000 -0.59993000 0.01237600 1.33250000 -0.57397000 -0.00747200 0.15114000 0.000 0.000 0.552 0.000 0.000 0.000 0.533 0.000 0.000 0.361 0.361 -0.593 0.000 -0.600 -0.600 0.000 0.000 0.000 0.000 1.332 1.332 -0.574 0.000 0.000 0.000 0.498 0.498 0.000 0.000 0.264 0.264 0.000 0.000 0.526 0.526 0.869 1.498 1.517 0.509 0.110 0.000 0.000 0.552 0.000 0.000 0.000 0.533 0.000 0.000 0.361 0.361 -0.593 0.000 -0.600 -0.600 0.000 0.000 0.000 0.000 1.332 1.332 -0.574 0.000 0.000 0.000 0.498 0.498 0.000 0.000 0.264 0.264 0.000 0.000 0.526 0.526 0.869 1.498 1.517 0.509 0.110 6.953485 5.717857 2.500624 15.463521 9.608105 1.986047 8.808055 5.061340 11.084837 9.064394 6.189925 3.500624 9.711054 10.510175 11.870878 9.540642 11.337623 9.150242 7.982829 8.076544 4.464100 12.772323 1.500649 6.960058 6.579577 8.076544 9.3685226 11.1105435 12.0895280 9.4767606 8.6745532 10.2387183 7.4075168 3.7636559 11.5936474 12.8572981 9.8404760 13.3237544 7.1899253 11.4577281 5.3486219 9.9924791 1.5006491 13.5502024 5.0115896 12.4511819 10.5229939 9.9657843 10.1285246 8.5406419 12.8972308 9.1241417 8.8599363 11.6044384 10.6584782 0.7636665 1.5006491 9.5263193 10.0575153 11.8480260 12.9964811 10.6148890 8.7139734 9.5073729 11.8270555 13.0079252 6.4733194 10.1652511 10.6371046 7.6825234 11.8555366 11.1031393 -0.8213810 8.7748878 11.5521069 11.1944615 9.2217253 9.1270652 9.0428842 15.4635208 7.9956818 7.9731136 10.2339804 8.8721848 9.0945773 11.0008704 10.8351228 9.7455797 13.8140193 8.9844418 9.3893693 9.2407441 9.9763595 7.9302418 5.4454850 11.8903650 10.2595155 9.9477093 10.3360449 9.8053195 8.5515195 9.5806441 10.8826016 9.8826015 12.1725863 NA 9.0100052 8.4075168 9.7226964 7.8511231 13.1893135 9.9924791 7.0366792 9.0825799 9.2924401 9.6705511 10.0084206 8.9908752 7.3783703 9.5318448 NA NA 7.3385697 1.5006491 9.7032397 5.4454850 11.0818267 8.4501609 10.1005390 9.7226964 0.1787465 10.8030365 13.6223538 9.8695690 10.4779060 10.6247474 9.7275199 8.6825238 5.7178573 10.1815129 10.1561997 0.1787465 6.3586072 12.4160573 9.3436048 10.2494898 7.5096151 5.7022586 12.8557569 10.6075815 10.7934078 11.0617230 9.6156592 11.8080546 9.9892696 8.4242507 10.5718041 11.1808097 10.4559853 1.5006491 0.1787465 7.6902530 3.6381318 13.9605699 9.7380750 9.0628686 -0.8213810 9.0103060 10.1652511 4.3881482 7.6584786 8.3208051 11.8041785 5.0613399 8.4915810 TCGA-AF-6672 43 0 NA 316 rectum stage iv t4a n2b mx 25-9-2014 male 2011 NA NA rectal adenocarcinoma no NA 18 white not hispanic or latino 139.38.0 NA NA 4 2 3 3 2 2 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9324622 11.3746449 12.4399660 8.5715456 9.9812616 10.8450770 5.4310646 0.1642714 10.5376870 3.0711620 8.6541258 10.8108367 9.5130061 9.4603453 10.1997645 11.8928363 0.7673400 0.7603200 -0.4848300 -0.0113350 0.5707700 0.5707700 0.5707700 -0.4530800 0.4456200 -0.4746900 0.7649200 0.7649200 0.5716600 0.5716600 0.5716600 -0.4388600 0.0649400 0.0334080 0.0334080 0.0397610 0.4794200 0.4794200 0.4794200 0.0070826 0.0150280 0.0150280 -0.0063668 -0.0145820 0.4176400 0.4161300 -0.4990200 -0.0298500 -0.0227440 -0.4799700 -0.4848300 -0.0113350 -0.0173910 0.0000000 -0.9951000 -0.4531900 -0.4530800 -0.4810800 0.7649200 -0.0737430 -0.4650400 0.4542700 -0.4388600 -0.4388600 0.0672320 -0.4399400 0.0334080 -0.9650600 -0.9650600 0.0397610 0.4794200 -0.4574700 -0.4307200 0.0070826 -0.454 -0.454 0.446 -0.025 0.765 0.000 0.572 -0.024 -0.439 0.000 -0.440 0.000 0.000 2.038 1.080 0.000 0.000 0.000 0.760 0.479 0.479 -0.457 -0.420 0.000 0.000 0.418 0.418 0.000 0.000 0.514 0.034 0.000 0.000 0.000 0.000 -0.435 0.135 0.000 0.000 0.000 -0.454 -0.454 0.446 -0.025 0.765 0.000 0.572 -0.024 -0.439 0.000 -0.440 0.000 0.000 2.038 1.080 0.000 0.000 0.000 0.760 0.479 0.479 -0.457 -0.420 0.000 0.000 0.418 0.418 0.000 0.000 0.514 0.034 0.000 0.000 0.000 0.000 -0.435 0.135 0.000 0.000 0.000 5.431065 4.022261 1.749234 15.195052 10.013683 3.071162 10.389485 15.329519 10.929564 8.556595 5.672072 4.449680 9.465774 10.983260 13.123374 9.766977 11.680470 10.766977 9.087606 4.971631 3.749245 11.665369 NA 7.715025 7.952180 8.664124 10.756268 10.749241 11.126089 10.503571 7.235740 10.811736 6.521830 6.431065 11.114105 13.024880 9.189418 13.343565 7.611361 12.439966 4.449680 9.407452 1.749234 14.365828 4.373732 11.400292 9.943997 10.985653 10.845077 7.034643 13.424168 10.636461 9.111184 12.409088 10.759535 2.334196 2.164271 11.036953 10.796364 12.011140 12.593685 11.499948 9.845516 9.290983 11.323203 13.319017 7.397898 10.482256 10.568355 7.965178 11.8577650 10.6834228 1.4861995 8.9324622 11.3746449 11.3746449 9.4038765 9.0003282 9.6571326 15.1950520 8.7716083 8.5884444 10.3719025 8.5630216 8.6092929 10.8090356 11.8789528 8.2365715 13.7423558 9.0392593 9.1300624 10.1155627 9.8828108 6.4951947 7.7073101 10.4246095 11.6611318 10.0269154 10.1365398 10.2148069 7.9406125 9.1486965 11.2799720 10.6765247 12.6117022 NA 8.7844978 8.5757888 11.0469211 9.0284642 13.3053473 9.4074520 9.1429885 7.5694197 7.8472729 8.9191655 10.7886165 8.8242740 8.2517409 10.0613671 0.1642714 NA 7.6318835 1.1642714 9.4760264 4.9456358 11.3513207 9.3367056 10.5533715 9.8534024 1.4861995 10.4339891 14.3125162 9.6420363 10.5376870 10.5007845 9.8171229 7.9619393 5.4680587 10.1141047 10.0125801 0.1642714 7.5349650 12.2850019 9.1053256 10.1235555 7.5867632 6.4026830 13.4184208 10.6770185 10.5409460 10.2517409 9.4603453 11.5349654 10.0696650 8.4002920 10.9991441 11.0924262 10.1997645 5.2935618 NA 8.7431601 0.1642714 13.6460774 9.9932079 9.7963645 1.7492339 8.2249741 10.4822558 5.5218297 8.3266695 6.7716083 12.2600047 4.6878390 7.0034819 TCGA-AF-A56K 56 0 NA 2635 rectum stage iia t3 n0 m0 25-9-2014 male 2006 NA yes rectal adenocarcinoma yes r0 0 black or african american not hispanic or latino 411.7.0 NA NA 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0063993 -0.0117680 -0.4583200 0.0535210 -0.0248950 -0.0248950 1.1981000 -0.0102320 -0.0213730 -0.0213730 -0.0089906 -0.0089906 0.9328400 0.9328400 0.9328400 -0.0175290 0.1257900 0.4285300 0.4408800 0.3588800 2.6848000 2.4957000 2.5938000 0.1078900 -0.4514700 -0.4514700 0.0063993 0.3826800 -0.3555600 0.0033299 0.0064497 0.0207630 0.0207630 -0.4583700 -0.4583200 0.0261040 -0.0618100 0.8687300 -0.0395290 -0.0102320 -0.0161540 -0.0213730 -0.0089906 -0.0089906 -0.0248110 -0.0281070 -0.0175290 -0.0175290 0.1211300 0.1257900 -0.4806000 -0.4575800 -0.4575800 0.3588800 -0.3342200 -0.4405900 -0.0326350 0.1078900 3.657 3.657 0.000 0.000 0.000 0.000 0.965 0.000 0.000 0.126 0.126 -0.052 0.429 -0.458 -0.458 0.359 0.359 0.000 0.000 -0.037 2.594 -0.441 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.402 -0.042 0.000 0.000 0.896 0.896 0.000 0.000 0.000 0.000 0.108 3.657 3.657 0.000 0.000 0.000 0.000 0.965 0.000 0.000 0.126 0.126 -0.052 0.429 -0.458 -0.458 0.359 0.359 0.000 0.000 -0.037 2.594 -0.441 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.402 -0.042 0.000 0.000 0.896 0.896 0.000 0.000 0.000 0.000 0.108 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AF-A56L 48 0 NA 2007 rectum stage iiic t3 n2 m0 25-9-2014 female 2008 NA yes rectal adenocarcinoma yes rx 10 black or african american NA 411.7.0 NA NA 4 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.2189500 -0.2240400 -0.1978700 0.1394300 0.9039200 0.8441300 0.8443900 -0.2205200 0.1116900 0.1116900 0.0076392 0.0076392 0.4502000 0.4502000 0.4739000 -0.2003700 0.1364300 3.6569000 -0.2267500 0.2818400 2.0086000 1.7329000 1.8605000 -0.0184900 -0.2116900 -0.2116900 -0.2189500 0.1181400 0.0000000 0.0000000 -0.2181200 -0.2156500 -0.2184200 0.1692600 -0.1978700 0.1394300 0.1299200 0.1433500 -0.6095000 -0.2126800 -0.1937200 0.1116900 0.0076392 0.0076392 -0.2234200 -0.2234200 -0.2805500 -0.2156100 0.1364300 0.1463700 -0.5868600 -0.5865700 -0.5937700 0.2818400 -0.2341000 0.0918800 -0.2251500 -0.0184900 -0.222 -0.222 0.112 0.112 0.000 0.000 0.474 -0.223 -0.216 0.136 0.136 -0.587 -0.227 -0.587 -0.587 0.282 0.282 -0.212 -0.212 1.626 1.861 0.000 -0.225 0.118 0.118 0.000 0.000 -0.218 -0.218 0.151 0.151 0.139 0.139 0.148 0.148 0.235 0.844 -0.212 -0.212 0.000 -0.222 -0.222 0.112 0.112 0.000 0.000 0.474 -0.223 -0.216 0.136 0.136 -0.587 -0.227 -0.587 -0.587 0.282 0.282 -0.212 -0.212 1.626 1.861 0.000 -0.225 0.118 0.118 0.000 0.000 -0.218 -0.218 0.151 0.151 0.139 0.139 0.148 0.148 0.235 0.844 -0.212 -0.212 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AF-A56N 47 0 NA 360 rectum stage iia t3 n0 m0 25-9-2014 female 2012 NA yes rectal adenocarcinoma yes r0 0 black or african american not hispanic or latino 411.7.0 NA NA 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.3266300 -0.3334900 -0.0011171 -0.0125840 0.0141820 0.0141820 0.0147400 -0.0080327 -0.0216550 -0.0216550 0.0143210 0.0143210 1.1839000 1.1839000 0.4363800 0.0201940 0.0314280 0.1193100 0.1193100 -0.0063751 1.7758000 1.1959000 1.3893000 -0.0825090 -0.3266300 -0.3266300 -0.3266300 0.0144610 -0.7152400 0.0117080 -0.0359190 -0.0433640 -0.0789630 0.0048495 -0.0011171 -0.0125840 -0.0220190 0.0075532 0.0141820 -0.0080327 -0.0080327 -0.0216550 0.0143210 0.0137400 -0.8082400 -0.8082400 -0.7931900 0.0201940 0.0314280 0.0314280 -0.7011000 -0.8012000 -0.8012000 -0.0063751 -0.8078300 -0.1653600 0.0112060 -0.1076100 0.000 0.000 0.000 0.000 0.000 0.000 0.440 -0.808 0.000 0.000 0.000 -0.582 0.119 -0.801 -0.801 0.000 0.000 -0.327 -0.327 -0.799 1.340 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.440 -0.808 0.000 0.000 0.000 -0.582 0.119 -0.801 -0.801 0.000 0.000 -0.327 -0.327 -0.799 1.340 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.102 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AG-3574 89 1 1096 0 rectum stage ii t3 n0 m0 25-9-2014 female 2005 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 1 1 4 NA 1 1 4 4 5 3 NA NA 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 1.040415e-06 3.814857e-07 8.3002478 10.8120673 12.0353781 7.8879243 9.1157304 9.5639612 -0.1673125 NA 11.0427045 2.4175960 7.4176045 10.7395326 9.4890670 9.6694499 9.6464233 11.5147588 -0.00797650 -0.00797650 -0.01243800 -0.00788630 0.86314000 0.86314000 0.84794000 0.00166420 0.82275000 -0.00995650 0.85106000 0.87249000 -0.00802440 -0.00802440 -0.00802440 0.00694350 0.01293400 0.00430210 0.00430210 -0.01436600 2.29300000 2.29630000 2.31270000 0.11008000 -0.00232870 -0.00232870 -0.00797650 0.77984000 0.00444110 -0.00346270 0.00000000 0.00000000 -0.00335340 -0.01243800 -0.01243800 -0.00788630 -0.01395300 -0.01009400 0.86314000 -0.00166290 0.00166420 -0.01352000 -0.92622000 -0.92518000 -0.92748000 -0.00346270 0.00694350 0.00694350 0.01293400 0.01293400 0.00430210 -0.89855000 -0.91591000 -0.01436600 -0.91561000 -0.46908000 0.00069327 0.11008000 0.000 0.000 0.000 0.000 0.872 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.908 -0.908 0.000 0.000 0.000 0.000 -0.757 2.313 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.863 0.863 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.908 -0.908 0.000 0.000 0.000 0.000 -0.757 2.313 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.863 0.863 0.000 0.000 0.000 6.6399976 5.1901921 2.4175960 15.7906065 8.8041856 6.4325553 8.4728870 12.2011485 10.4546939 9.2568083 5.3562037 1.8326470 10.1375637 10.6583959 11.6945044 8.9489859 11.2510218 10.1934891 8.1364226 11.9934589 3.6399961 11.9804830 0.8326065 6.4473527 8.0372131 8.1945860 9.3948845 10.9041044 12.6221757 9.3756739 6.8660648 9.7780858 6.5050668 5.2589071 12.6223795 13.0411813 9.5068344 12.8361600 7.3244956 12.0353781 6.3718010 8.6432137 3.1545670 13.7196722 6.0420949 13.4480418 10.4773997 10.0867968 9.5639612 7.3640234 11.3562040 9.4510277 8.1409811 10.2377836 10.1747168 0.8326065 -0.1673125 9.3522783 9.8284093 10.9664265 13.4827963 11.2936098 7.0420949 9.2120204 11.3477899 12.7047398 7.1635591 9.7897441 10.3571838 7.8770362 11.6863415 10.7744233 1.4175960 8.3002478 10.6945044 10.8120673 9.5068344 9.1967767 8.6749609 15.7906065 9.2797252 7.6781318 9.6576009 6.9515831 9.3204822 10.4574375 10.4818983 8.7983399 14.0433895 9.2399099 8.1409811 11.1093481 10.8020286 8.1724920 5.2249587 12.8719039 9.9372408 10.7911948 9.9267197 9.6607786 10.1108010 9.0372134 10.6066055 9.9798470 12.3847011 NA 8.3640234 9.6216702 9.9359298 8.0566437 12.6301010 8.6432137 8.5941932 9.1791557 7.3795369 9.1087665 9.6156403 10.3830426 9.9121269 8.6937291 NA 0.8326065 7.8605482 1.8326470 9.8170606 5.7395322 11.6777400 8.6205446 10.1646786 11.8497984 0.8326065 10.1890940 14.5897195 9.2797252 11.0427045 10.1780473 9.4764983 8.7839267 5.0805681 11.0131729 9.7485961 NA 5.8099212 13.8985630 11.2430934 10.5991709 7.0805692 5.6655321 13.2404409 11.7857472 11.6094863 10.7619005 9.6694499 11.5361131 10.3718009 8.3164580 11.8374770 11.1918425 9.6464233 NA 2.8326470 7.9957383 4.4764983 13.3568164 9.2163465 8.3986962 -0.1673125 8.4816110 9.7897441 7.0900298 8.8041856 7.8987314 11.5296096 3.4176095 7.6335416 TCGA-AG-3575 51 0 NA 365 rectum stage ii t3 n0 m0 25-9-2014 male 2006 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 2 1 NA NA NA 4 3 5 3 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 1.456582e-06 2.774441e-07 8.712709 9.889002 11.843825 7.603973 6.893480 11.126902 NA NA 11.978486 3.675059 8.458432 9.525364 10.262329 10.264901 9.398783 9.976025 0.00166420 0.00166420 0.00000000 -0.00221680 -0.00498440 -0.00498440 -0.02600900 0.00610900 0.73720000 0.73720000 -0.00774820 -0.77812000 -0.79845000 -0.79845000 0.00083195 0.00628820 -0.00691950 0.72603000 0.75375000 -0.77583000 -0.00360110 -0.00360110 -0.00360110 -0.26706000 0.00166420 0.00166420 0.00166420 -0.00463630 0.00780920 0.00907400 -0.00055444 0.01992300 0.01042400 0.00000000 0.00000000 0.02258500 -0.78880000 -0.00235530 -0.01663600 0.00610900 -0.00036475 0.73720000 -0.00774820 0.00069327 -0.09062600 -0.09062600 0.00628820 0.00628820 -0.00691950 -0.00691950 -0.78967000 -0.77243000 -0.77243000 -0.77583000 -0.00360110 -0.77380000 -0.78673000 -0.26706000 0.000 0.000 0.737 0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.726 -0.772 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.787 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 -0.224 0.000 0.000 0.737 0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.726 -0.772 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.787 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 -0.224 8.999756 6.417561 3.559577 12.900423 7.567074 3.296546 8.109043 5.996985 12.136693 10.552046 6.742801 3.881508 10.118000 9.902395 11.274969 9.513776 10.495235 8.287500 7.392469 6.466471 3.675059 11.255967 4.062079 5.332167 3.296546 6.529206 9.56333148 9.96330144 13.23612409 8.35399499 6.91713096 9.76740701 7.09355806 5.55958053 6.80750691 13.42428131 8.73948833 13.68423913 6.72950383 11.84382501 8.38400792 8.92298393 3.14453589 14.12460200 5.36693414 11.39825796 9.41756036 9.57638760 11.12690164 8.92881295 12.71713675 9.29202938 8.59300224 9.55015612 10.58932662 2.78196814 -0.02532386 9.97320715 10.32666025 12.61305269 8.52920564 12.02820331 7.99142491 7.60397344 10.32664913 13.55781710 8.69229328 9.32996784 10.14328894 7.14454201 11.01422130 10.61033492 0.97460273 8.71270892 10.45136300 9.88900194 8.20823631 9.43404832 9.32334485 12.90042339 5.06207853 3.55957747 9.13952373 10.65321689 9.26232909 9.90535406 11.41704198 9.01139472 14.34584891 9.16937362 8.52536342 8.57080671 10.35724078 7.95761052 4.29654551 12.13983785 9.63282821 6.57452995 8.80750691 9.32113056 8.99106289 9.75104974 11.24374345 9.26693830 11.61730482 NA 8.37549607 8.54765804 9.80592408 8.03531269 12.11736207 8.92298393 5.80750691 10.82245715 7.50599808 7.68886223 10.12690164 7.70484915 11.00409726 9.04607901 NA NA 7.45843286 NA 10.62566848 6.83259765 10.52343866 8.92590154 10.60852023 11.32279165 NA 8.98304547 13.54542121 9.66810370 11.97848599 11.34748185 9.95761038 10.16073102 2.55958970 10.60761198 8.69267024 NA 3.78196814 12.76231532 11.86412074 10.77794066 6.64958528 4.78197338 12.47496074 11.69486104 11.79917783 10.63817487 10.26490067 10.82948515 8.98863726 8.45035018 10.33656056 9.55769957 9.39878302 3.78196814 -0.02532386 7.67207099 1.55958970 14.43788569 9.05676586 8.18893594 NA 8.85725978 9.32996784 -0.02532386 8.10389991 6.70253704 12.31891270 4.67505374 6.88150679 TCGA-AG-3578 76 0 NA 974 rectum stage iia t3 n0 m0 25-9-2014 female 2007 NA NA rectal mucinous adenocarcinoma yes r0 0 NA NA 42.51.0 2 5 4 NA 3 4 4 3 5 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7.976519e-07 1.040415e-07 8.767474 11.457790 12.176488 8.607353 10.004778 10.040191 2.138126 NA 10.365974 2.401139 8.389837 10.590977 9.957019 10.209473 10.143742 11.051007 0.4749500 0.4873300 -0.8820900 0.0502500 -0.8636700 -0.8636700 1.6961000 -0.8664100 -0.3910700 -0.4061900 0.0155870 0.0155870 0.0144700 0.0144700 0.0144700 -0.8503500 0.0283410 0.0429730 0.0429730 -0.0137320 0.0442900 0.0442900 0.0442900 -0.2298900 -0.3901800 -0.3901800 -0.3901800 -0.4234200 0.0093014 -0.4321400 0.0000000 0.0000000 0.0000000 0.0124210 -0.8820900 0.0209680 -0.8848800 0.0161730 -0.8861200 -0.8664100 -0.8664100 -0.4051700 0.0155870 0.0155870 0.0293250 0.0293250 -0.8570100 -0.8503500 -0.3775200 -0.3918500 -0.8575700 -0.8667200 -0.8667200 -0.0137320 -0.8617600 -0.0253460 -0.8376200 -0.2298900 0.000 -0.866 -0.406 -0.406 0.000 0.000 0.000 0.000 -0.850 -0.378 -0.378 -0.858 0.000 0.831 -0.867 0.000 0.000 0.085 0.475 -0.862 0.000 0.000 -0.834 -0.399 0.000 0.000 -0.432 0.000 0.000 0.000 -0.882 0.000 -0.885 0.000 0.000 0.842 1.696 0.000 0.000 -0.244 0.000 -0.866 -0.406 -0.406 0.000 0.000 0.000 0.000 -0.850 -0.378 -0.378 -0.858 0.000 0.831 -0.867 0.000 0.000 0.085 0.475 -0.862 0.000 0.000 -0.834 -0.399 0.000 0.000 -0.432 0.000 0.000 0.000 -0.882 0.000 -0.885 0.000 0.000 0.842 1.696 0.000 0.000 -0.244 7.045008 5.945472 3.275618 14.331765 9.287865 1.816190 9.607353 5.101591 9.945473 8.914222 6.208508 3.516633 9.754299 10.980468 12.104190 9.612229 11.315039 10.451001 8.707973 6.827416 3.138110 9.162703 NA 8.412379 8.419816 8.655393 10.5483570 10.5114178 10.8795846 9.9873663 7.5843740 11.0462100 7.5508991 5.0256446 11.2170690 13.5229014 9.0305088 13.5922113 7.6427384 12.1764880 7.1825116 8.1336021 2.9861196 13.8332589 5.3080441 10.7848564 10.1814184 10.7417440 10.0401912 8.4528141 12.6630511 11.0700371 9.6896338 13.4190044 10.9036524 3.4011526 -0.1837689 11.0078657 10.5584990 12.3274481 10.6710579 11.2101163 10.2149332 9.1199703 11.2116755 13.1703012 7.0923142 9.3259645 10.7769156 7.8218142 12.0519047 10.8592169 NA 8.7674744 11.6663764 11.4577898 9.9155373 8.1868769 9.9206704 14.3317650 7.5777407 8.5576567 10.9633945 8.4886150 8.8413291 11.1715407 11.8802586 8.6931670 13.8096587 8.9115867 9.3318895 10.0035417 10.0735774 7.0060141 5.5975491 11.4703780 9.9747993 9.6187059 10.1199703 10.4877306 7.5975491 9.1803242 11.1375540 10.4327385 12.6406651 1.8161901 8.8956743 9.2440681 10.8295123 9.5389971 12.7491425 8.1336021 9.5338660 8.6772764 7.5026902 9.5355785 10.4528142 9.4364094 8.4636478 9.0593637 NA NA 8.6616798 1.4011389 10.3945623 5.1737431 10.9779513 8.9273252 10.3812917 10.0183134 NA 10.5483570 13.2198674 9.6663763 10.3659743 10.0474108 9.5458103 8.8077114 1.8161901 10.2969797 10.6280298 NA 6.9659366 12.8873167 10.0719735 9.7877331 7.5695397 6.4161017 12.6567708 10.0557881 10.2319313 10.3650115 10.2094727 12.1615948 10.3955055 7.9089468 10.3620325 11.7117649 10.1437422 NA 5.0256446 8.1175486 1.4011389 13.7218586 9.8605837 9.5627040 0.8161491 8.0969602 9.3259645 NA 8.3860453 6.6988324 11.9509368 5.1737431 5.9036529 TCGA-AG-3580 67 0 NA 244 rectum stage i t1 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 1 1 1 NA 3 4 4 4 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040415e-06 3.814857e-07 8.438537 10.739092 11.623471 8.309917 8.753660 9.480357 1.029135 NA 10.654855 2.351063 7.621604 10.462732 10.338623 10.252460 10.151974 11.526499 0.00477290 0.00477290 0.00458000 0.01056400 -0.00097017 -0.00097017 -0.00097017 -0.00705760 1.00260000 -0.00166290 0.00083195 0.00083195 -0.02130300 -0.02130300 0.00041593 -0.00221680 -0.02054900 -0.00553750 -0.00553750 -0.02644100 0.60864000 0.60864000 0.60864000 0.02876300 -0.01906900 -0.01906900 0.00477290 0.00374650 -0.48091000 0.01295000 -0.00110870 0.02623300 0.01838300 -0.00635980 0.00458000 -0.00784120 0.01056400 0.00000000 -0.00097017 -0.00705760 -0.00705760 -0.00166290 0.00083195 0.00083195 -0.00110870 -0.00110870 -0.00221680 -0.00221680 -0.02054900 -0.02054900 -0.00553750 -0.00083160 -0.00083160 -0.02644100 0.60864000 -0.00207840 -0.02397700 0.02876300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.609 0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.609 0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.757067 4.784033 1.614097 14.766890 10.062569 3.029152 8.625336 7.680198 9.873067 9.286534 6.862036 4.614109 9.357821 10.607519 12.358382 9.231270 11.161646 9.880895 8.209056 4.552709 4.029144 11.576041 3.936035 7.715647 8.647532 7.386698 9.480357 10.779016 12.053940 9.472090 8.272320 10.186493 7.295933 5.614109 11.386148 13.110796 9.236161 13.308757 7.029146 11.623471 6.504879 7.178894 2.614097 13.654170 5.158430 13.165657 9.651198 9.747885 9.480357 6.757067 12.324054 9.803933 9.542874 11.592343 10.012140 NA NA 9.480357 10.483446 11.195309 12.513969 11.197818 7.849325 8.760465 11.320265 13.097421 7.770613 9.498788 9.920930 6.923964 11.8525136 10.9517307 NA 8.4385374 10.9110251 10.7390917 9.1940533 8.1788934 9.0625694 14.7668901 8.3052706 8.1376710 10.6178610 9.5990019 9.1763512 10.8072234 10.5359498 9.7295687 14.4849873 8.9269918 9.0844287 10.8373061 10.5319781 9.2239032 6.3329263 12.2717250 10.0192503 10.7647024 10.0389749 9.8746364 7.5787387 9.5089266 10.7459658 10.8917837 12.1783695 -1.5704644 8.5169863 9.6342925 10.0092859 8.7873694 12.6112883 7.1788939 5.6141091 7.6364767 6.3329263 9.4679383 9.8572828 8.6923132 9.9818876 8.3822933 NA 0.0291348 8.6027935 NA 10.4957327 5.0291481 11.6725516 9.6327728 9.9375389 10.5517279 2.6140973 10.5089267 13.4101485 9.5289922 10.6548552 10.3756600 9.9390395 9.4469989 2.8365099 10.9041277 10.8778397 NA 6.8105061 12.6750299 10.8469294 10.4052717 7.6005195 5.7015712 12.9156050 11.3116556 10.8556948 11.1978185 10.2524602 12.0611921 10.5008216 8.3734425 12.5242094 11.4777789 10.1519743 2.0291348 2.3510629 8.1023773 6.5048794 13.3506517 9.7191442 8.9360369 2.8365099 9.0290901 9.4987882 1.0291348 8.5289924 6.5369403 11.6958142 3.9360348 4.9833448 TCGA-AG-3581 63 0 NA 215 rectum stage i t2 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 6 3 NA 1 2 2 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 1.213818e-06 5.895688e-07 8.3303742 11.2909885 13.1326937 7.8308036 7.6262646 9.5776845 0.3879139 NA 10.8224881 2.7097979 7.6824806 10.5068010 9.9690604 9.8591895 9.9405290 11.2932468 1.4330e-02 3.1691e-03 -1.1305e-02 -5.1934e-03 0.0000e+00 0.0000e+00 0.0000e+00 -2.7724e-04 -6.6346e-01 -6.7182e-01 3.0522e-03 3.0522e-03 6.3667e-01 6.3667e-01 6.3667e-01 1.6705e-02 1.8215e-02 6.9634e-01 6.7771e-01 3.7465e-03 1.5623e+00 1.5431e+00 1.5504e+00 -1.8079e-02 1.4330e-02 1.4330e-02 1.4330e-02 5.5105e-05 -6.7976e-01 -1.8014e-03 -2.9712e-03 -2.9712e-03 -2.1547e-02 -1.1305e-02 -1.1305e-02 2.7728e-04 -5.1934e-03 6.4524e-01 0.0000e+00 -2.7724e-04 -2.7724e-04 -6.6892e-01 3.0522e-03 3.0522e-03 -6.7095e-01 -2.4938e-03 1.6705e-02 1.6705e-02 1.8215e-02 3.4113e-02 -6.7573e-01 -6.6494e-01 -6.6494e-01 3.7465e-03 -6.6818e-01 -2.2736e-01 -6.7030e-01 -7.7482e-03 0.000 0.000 -0.672 -0.672 0.000 0.000 0.637 0.000 0.000 0.000 0.000 -0.676 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.882 1.550 -0.227 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.636 0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.672 -0.672 0.000 0.000 0.637 0.000 0.000 0.000 0.000 -0.676 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.882 1.550 -0.227 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.636 0.636 0.000 0.000 0.000 0.000 0.000 7.0172160 4.6357892 3.9728213 15.2700047 10.4349837 5.1427483 7.4539488 7.6916409 10.7465110 9.4185271 5.9424488 3.9728213 10.0796033 10.2535931 11.7666966 9.3215505 10.3244977 9.2396088 8.0882996 5.5577838 3.5577899 11.6172795 0.3879139 6.6166782 8.1952147 6.9577150 9.745412 11.109813 12.670369 9.716535 7.182276 10.436347 6.957715 5.557784 12.475654 13.435154 10.156044 13.240779 6.870063 13.132694 6.517143 8.883715 3.195222 14.619231 6.342057 12.264760 10.309701 9.774843 9.577684 7.911422 11.989631 8.995190 9.339145 12.228244 10.287217 2.709798 3.387859 9.942449 10.473996 11.790339 13.542045 11.096944 8.430067 9.031716 11.245048 13.132483 7.142747 9.451255 10.695061 6.342057 12.3263368 11.7365880 1.3878588 8.3303742 10.5286896 11.2909885 9.0673400 8.8877056 7.8714340 15.2700047 8.7232503 7.7972510 10.6238741 7.6452477 8.9386066 10.9961146 11.1225695 8.8116480 14.1806501 9.0531958 8.4753229 10.8867090 9.7097879 7.6916409 7.8956546 12.2811614 10.3007492 11.3333037 10.5739741 10.2674431 8.4911476 8.4267788 10.5222862 9.7142893 12.6991512 -1.2115649 9.1293268 9.6891961 10.1444162 9.2427283 13.0585161 8.8837149 7.5171426 9.3594034 7.9347541 10.3920803 9.9153368 8.3594034 6.5171434 7.9877728 NA NA 7.4858921 NA 9.7951276 6.5776841 12.1589366 8.8057123 9.8390710 9.8014879 NA 10.8411305 13.6091449 9.6801816 10.8224881 10.4885222 9.9558160 8.3420560 5.9114208 10.4129994 10.3677565 NA 7.7097883 13.2504972 10.4727745 10.5106878 7.3990873 4.7801788 13.0682194 11.1217226 10.5132733 11.4970376 9.8591895 12.0213092 11.0839580 8.8877056 10.2225048 11.8250918 9.9405290 1.3878588 0.3879139 8.7064480 3.3878588 13.5890649 9.0460714 8.4646756 0.3879139 8.7037794 9.4512550 2.7097979 7.8472917 7.5477313 11.3111874 5.2458417 6.4322546 TCGA-AG-3582 75 1 1096 31 rectum stage iv t3 n1 m1 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r2 1 NA NA 42.51.0 2 7 4 NA 1 1 4 4 5 3 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 9.710544e-07 1.734026e-07 8.961497 10.866096 12.075487 7.718927 8.597086 9.482069 2.891108 NA 10.734086 2.569175 7.845304 10.903453 9.922326 9.989814 9.909029 12.029123 -0.11822000 -0.11822000 -0.07435700 0.89989000 1.23800000 1.23800000 1.03290000 0.01446900 0.00013784 0.00013784 -0.00622940 -0.00622940 1.01070000 1.01070000 1.02870000 0.02510900 3.30960000 0.26231000 -0.55287000 0.48406000 2.16120000 1.62390000 1.62390000 -0.01698000 -0.21670000 -0.11822000 -0.11822000 -0.49494000 0.01419000 0.02020200 -0.56286000 -0.54250000 -0.55015000 -0.05953900 -0.07435700 -0.00609120 0.00958750 0.54400000 -1.18380000 -0.60158000 0.01167800 0.00013784 -0.00622940 -0.00622940 0.04145700 -0.52560000 -0.53612000 -0.53612000 0.00360680 -0.69541000 -0.57002000 -0.55276000 -0.55276000 -0.59058000 1.02300000 -0.54724000 -0.55537000 -0.02493600 0.000 0.000 0.000 0.000 0.000 0.000 1.029 -0.503 -0.520 0.000 0.000 -0.553 -0.553 -0.553 -0.553 0.465 0.000 -0.118 -0.118 1.040 1.624 -0.551 0.525 -0.468 0.000 0.000 0.000 -0.561 -0.561 0.538 0.538 0.000 0.000 0.544 0.544 -0.312 0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.029 -0.503 -0.520 0.000 0.000 -0.553 -0.553 -0.553 -0.553 0.465 0.000 -0.118 -0.118 1.040 1.624 -0.551 0.525 -0.468 0.000 0.000 0.000 -0.561 -0.561 0.538 0.538 0.000 0.000 0.544 0.544 -0.312 0.783 0.000 0.000 0.000 7.363595 5.028609 2.891108 14.696598 9.230958 6.499918 9.252174 2.569175 10.020391 9.448763 6.451823 4.028613 9.677704 9.888852 11.527007 9.460963 10.912365 9.520464 9.580407 7.797998 3.739103 12.131422 2.569175 5.739106 5.476071 8.877519 9.442624 11.828334 12.137136 9.526281 8.505818 9.534964 6.759004 4.891108 13.113178 12.459444 9.870676 12.396522 5.976872 12.075487 7.154142 8.414670 2.569175 14.835161 3.891108 12.403651 10.882062 9.670000 9.482069 8.069025 11.881495 9.007971 8.052995 11.339843 10.496958 NA NA 9.241605 10.044913 11.105427 11.862076 11.061033 8.399219 9.061033 11.693921 12.880076 6.476071 10.209424 10.566359 8.092741 11.9040114 10.9256315 2.5691751 8.9614969 11.0275861 10.8660957 8.6724674 8.3635956 8.6026024 14.6965984 8.0769743 8.5859878 10.3156938 8.1765098 8.8453041 11.5783083 10.4240478 9.2965896 14.8121303 8.9528839 9.5320755 9.5859878 10.6907130 8.8911075 6.7590040 12.0265604 10.5291814 11.9938707 9.8406425 9.9975397 8.3751811 9.7340863 10.7907667 9.1428267 12.6662964 NA 9.3307307 8.8312274 10.1985361 8.6459952 11.9668542 8.4146696 6.4518227 8.6513287 8.3173724 9.5550214 9.6352686 8.6436957 8.4083832 7.9528839 NA NA 8.4760702 0.5691994 8.9528839 5.6984630 11.0809322 8.9954444 10.0966565 9.5291814 0.5691994 11.3447898 13.5755056 9.6829217 10.7340864 10.7201960 9.9721915 9.2166380 5.2696204 9.4969574 10.0040370 NA 6.8545817 12.5204642 9.1101599 10.2556800 7.5116942 4.8911081 13.1967134 10.8051937 10.8683875 11.0540024 9.9898136 12.2071628 10.0610327 8.7590040 9.9528838 10.7614723 9.9090295 NA NA 8.8540268 6.0286111 13.7279470 9.4115298 8.2345152 NA 9.0585860 10.2094245 NA 8.1616363 8.7189267 11.4372303 4.3765335 5.5691781 TCGA-AG-3583 66 1 610 61 rectum stage iv t3 n2 m1 25-9-2014 male 2008 NA NA rectal mucinous adenocarcinoma yes r2 9 NA NA 42.51.0 1 6 1 NA 3 3 2 3 4 1 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 7 0 0 0 1.629984e-06 4.508467e-07 7.7819518 10.0372588 11.2765970 7.7893315 8.9093309 9.5365653 0.1746621 NA 11.2107950 NA 7.2190155 8.4553922 9.4177954 9.8732566 9.6196362 12.3322841 0.01516800 0.01516800 -0.01184800 0.00000000 -0.00033937 -0.00033937 0.01433000 0.02293000 0.77118000 0.00182860 0.01070300 0.01070300 0.72697000 0.72697000 0.72697000 -0.34320000 0.05817200 0.06899100 0.07254000 0.04968200 0.84100000 0.84100000 0.83106000 -0.06866300 -0.75702000 0.02521400 0.01516800 0.00638710 -0.36136000 -0.37256000 -0.00498440 -0.00498440 -0.02338200 -0.01184800 -0.01184800 0.00000000 0.01796300 -0.00269410 -0.00033937 -0.78866000 0.04599100 0.01656500 0.01070300 0.01070300 -0.00294610 0.01429800 -0.34320000 -0.34320000 0.08216200 0.05817200 0.06899100 -0.78032000 -0.78032000 0.04968200 -0.77133000 0.03284500 -0.75053000 -0.06866300 0.000 0.000 0.000 0.000 0.000 0.000 0.727 0.000 -0.343 0.000 0.000 0.000 0.000 -0.780 -0.780 0.000 0.000 0.000 0.000 0.060 0.831 0.000 -0.751 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.727 0.000 -0.343 0.000 0.000 0.000 0.000 -0.780 -0.780 0.000 0.000 0.000 0.000 0.060 0.831 0.000 -0.751 0.000 0.000 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 -0.373 0.000 6.344546 3.981980 1.759582 15.132405 8.487504 1.759582 8.413026 10.809432 10.194212 8.709897 6.007512 4.422549 10.277909 10.086013 11.554541 9.254106 10.316728 9.251437 6.861122 1.174598 2.759582 10.769879 1.759582 7.868108 8.759584 7.706003 9.032602 10.314173 11.455972 8.702099 6.916088 9.719586 6.634053 5.847047 12.125177 13.004344 8.962524 13.265891 7.148577 11.276597 6.789331 7.478402 2.496539 14.118601 5.219014 12.457420 8.926166 9.673889 9.536565 6.422549 12.065646 9.686374 9.020112 12.289014 10.069439 1.174598 2.496539 9.523349 10.066405 11.300681 12.862434 11.857177 8.995726 8.518917 11.061057 13.362747 7.334492 9.293562 9.827466 6.600887 11.6113330 10.7680125 1.1745982 7.7819518 10.6774532 10.0372588 8.8854279 9.0263705 8.4738295 15.1324045 8.4920338 7.1288182 10.1346233 8.1229884 9.3767453 10.4875043 11.3103307 8.7453120 14.5850727 7.9160884 8.2190155 11.3871178 11.4124289 8.4738295 7.7368639 12.5993126 10.1647253 11.1795441 9.2752837 9.8470467 10.1585698 9.5474865 10.4355409 10.2594297 12.5196828 2.1746301 8.6903214 10.1617432 9.9311778 9.0994338 12.0739783 7.4784024 7.9884024 7.0572640 6.4034399 9.6624613 10.1142006 11.0994710 9.8238775 7.8328331 NA NA 7.4692421 NA 10.1244481 5.4965486 11.7373408 9.6422270 9.7966732 10.7425775 0.1746621 9.8646194 13.8337254 9.6381457 11.2107950 10.6381458 9.5945816 9.0542046 4.8184774 10.2121683 10.3605374 NA 7.3243687 13.5643872 11.1031176 10.4784022 7.4034399 5.6340530 12.0747335 11.3557737 11.7025870 10.3026157 9.8732566 11.6035049 10.2312591 7.9755213 10.6164244 10.8931543 9.6196362 2.1746301 3.3445445 8.8274307 4.0815101 13.4552472 9.2935625 8.6299485 2.4965390 9.0187307 9.2935625 3.3445445 8.4034403 7.7520501 11.5239026 3.9819805 6.8750612 TCGA-AG-3584 60 1 730 0 rectum stage iv t3 n2 m1 25-9-2014 male 2008 NA NA rectal adenocarcinoma yes r2 20 NA NA 42.51.0 3 5 4 NA 3 1 4 3 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710544e-07 1.734026e-07 8.931055 10.879719 12.463626 7.887616 9.103695 9.741899 1.048445 1.048445 9.947769 3.748848 7.388262 10.922625 9.286817 9.594207 10.146444 11.265764 0.0280600 0.0280600 -0.0047079 0.7425200 0.1368700 0.1368700 1.4577000 0.0192200 0.0038854 0.0038854 0.0139110 0.0139110 -0.0192980 -0.0192980 -0.0123100 -0.7250000 0.0317180 0.0723960 0.0723960 0.0246890 1.5438000 1.5101000 1.5101000 -0.3578900 -0.6700200 -0.7213800 -0.7262300 -0.0013858 -0.7405400 0.0632230 0.0000000 -0.0207660 -0.0134020 -0.0049844 -0.0047079 -0.7477800 -0.7548700 0.7087000 -0.7569400 0.0192200 0.0210430 0.0038854 0.0139110 0.0085156 -0.0342230 0.6070200 -0.7250000 -0.7250000 0.0317180 0.0317180 -0.7291400 -0.7131000 -0.7198700 0.0246890 -0.7561600 -0.7216300 -0.7462900 -0.3578900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.685 0.000 0.000 -0.729 0.000 -0.713 -0.713 0.000 0.000 -0.721 -0.721 1.510 1.510 -0.722 0.000 0.000 0.000 -0.741 0.000 0.000 0.000 0.000 0.000 -0.742 -0.742 0.709 0.709 -0.620 1.458 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.685 0.000 0.000 -0.729 0.000 -0.713 -0.713 0.000 0.000 -0.721 -0.721 1.510 1.510 -0.722 0.000 0.000 0.000 -0.741 0.000 0.000 0.000 0.000 0.000 -0.742 -0.742 0.709 0.709 -0.620 1.458 0.000 0.000 -0.358 7.564112 6.198160 3.370346 13.808730 9.627728 5.333814 6.803299 NA 10.375965 9.419100 6.025691 3.507845 10.584659 9.803300 10.990927 9.119875 10.563126 9.056841 8.819902 8.759219 4.507845 11.979519 2.633385 7.423451 7.706624 8.172534 9.599159 11.042058 12.654586 9.495496 7.002608 9.774630 7.125227 6.070780 12.452755 12.819283 9.412547 12.850121 6.762657 12.463626 6.906393 9.520087 3.048411 14.563065 4.803299 11.624424 9.343033 9.571974 9.741899 8.374842 12.002609 9.612562 8.648325 11.378769 10.480954 3.218332 3.507845 9.623952 10.498592 11.002609 12.657591 10.737537 8.065221 9.390487 11.262695 13.117862 6.829772 9.542268 10.752316 6.440730 12.819283 11.567065 NA 8.931055 10.948524 10.879719 8.809964 8.208284 8.568048 13.808730 7.218338 8.172534 11.185403 8.002609 8.924929 11.580768 10.142490 8.686233 14.026139 7.955303 9.154321 10.892333 10.114501 8.065221 7.532228 12.273318 10.489281 11.767373 10.868591 11.020674 9.127737 9.172534 10.609700 9.485124 13.227959 3.858856 9.604918 9.425341 10.218337 8.319875 12.554472 9.520087 6.507844 9.927995 8.625841 10.542268 10.187964 9.515325 7.776332 9.310507 5.979150 3.748848 8.172534 NA 9.715524 6.803299 12.321334 8.324537 11.074936 9.372593 1.633385 11.503739 12.946447 10.556207 9.947769 10.558187 9.971740 8.745380 4.296340 9.495496 10.644304 1.633385 7.002608 12.834069 9.363517 10.039934 7.296340 5.048411 11.964292 10.510914 11.300486 12.178339 9.594207 11.814941 10.896253 9.100980 9.398711 12.042412 10.146444 2.633385 1.633385 7.929710 8.208284 13.324100 8.552238 8.918777 1.633385 8.949611 9.542268 NA 7.333815 7.125227 11.340158 4.748853 5.855768 TCGA-AG-3586 72 0 NA 31 rectum stage iii t3 n2 m0 25-9-2014 female 2006 NA NA NA yes r0 4 NA NA 42.51.0 1 8 1 NA 3 3 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 1.421901e-06 1.144457e-06 8.441413 10.748372 12.199056 7.998179 7.809145 10.112195 3.750253 0.165301 10.678029 0.165301 7.374742 10.480438 10.442576 7.113539 9.744605 11.560287 0.00181340 0.00000000 -0.03528100 0.00709310 -0.76757000 0.70702000 0.69859000 -0.00505130 0.00139720 0.01587700 0.00877540 -0.00345240 1.30100000 1.30100000 1.31960000 0.01657600 0.01867300 0.03088900 0.03088900 0.00014904 0.51578000 0.51578000 0.49201000 0.05026100 0.01825400 0.00570230 0.00181340 -0.01997200 0.02512000 -0.00884230 -0.00608000 -0.02355500 -0.03992900 -0.01215200 -0.03528100 0.00709310 -0.00815210 -0.01793100 -0.80293000 -0.00505130 0.01937300 -0.01586700 0.00877540 -0.01049800 -0.00418690 0.00084236 0.01322400 -0.00052503 0.01071300 0.01867300 -0.57801000 -1.29290000 -0.01628100 0.00014904 0.51282000 -0.01930400 0.02680500 0.03539300 0.000 0.000 0.000 0.000 0.000 0.000 1.301 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.516 0.516 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.069 0.699 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.301 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.516 0.516 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.069 0.699 0.000 0.000 0.000 7.060107 5.119485 2.750242 14.754633 9.906756 3.972647 9.096026 10.031022 9.879534 8.688851 5.119485 2.750242 9.682958 10.401303 12.658143 9.816233 11.359430 9.682958 7.060107 6.413217 3.624721 11.238091 2.165301 7.142569 7.107803 7.505139 9.225985 10.514017 11.875234 9.128185 7.816341 9.926840 6.823500 4.920174 11.823947 13.136114 9.168104 13.186095 6.413217 12.199056 6.096026 8.578917 2.487229 14.371311 2.750242 12.979270 9.335214 9.879534 10.112195 7.574680 12.081168 9.507364 8.889803 13.160703 9.661144 2.750242 1.165301 9.535976 10.300998 11.072931 12.334901 11.244774 7.742718 9.041806 11.275100 13.086944 7.252752 8.325160 10.082661 7.742718 12.088245 11.467356 NA 8.441413 10.888096 10.748372 8.816341 8.459909 8.379608 14.754633 7.979070 7.991837 9.800100 7.422677 8.893209 10.907598 10.792823 9.568855 14.676362 8.587353 8.616500 10.719878 10.592602 7.072180 5.750250 11.587354 10.177913 10.796466 9.755876 10.070676 7.932546 9.322636 10.788256 9.480438 12.731431 -1.434013 8.712183 9.145228 10.247438 9.284230 13.484961 8.578917 7.794645 8.198712 8.268577 9.828847 10.037194 9.266661 5.522840 9.389290 NA NA 7.072180 NA 8.692766 5.165289 11.908019 8.661144 10.340214 11.163879 1.750263 10.523940 13.728604 9.190428 10.678029 10.696670 9.923512 8.913482 2.750242 9.719878 11.013935 NA 5.209683 13.067664 9.764532 7.750251 7.273813 5.072179 12.915786 11.361891 11.061621 11.388687 7.113539 12.109635 10.818134 7.991837 10.790998 11.512910 9.744605 0.165301 5.165289 7.893005 6.072179 13.041614 9.561894 8.649105 0.165301 9.050985 8.325160 0.165301 6.985467 6.231379 11.649608 3.750253 4.972642 TCGA-AG-3587 65 0 NA 1400 rectum stage i t2 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 2 1 NA 3 3 4 4 4 1 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 4 1.699345e-06 5.548882e-07 8.576994 11.118140 11.947570 8.186410 8.799387 9.029684 NA 1.876566 11.072952 2.613532 7.683910 11.001537 9.352288 9.774380 9.079495 11.377728 0.4361400 0.3870100 0.0000000 0.3331600 -0.6449000 -0.6449000 1.7130000 0.3701300 0.3365800 -0.1247300 0.4196500 0.4196500 1.5193000 0.7332200 0.7332200 0.3503900 -0.0579240 0.3004200 0.3190500 -0.1752500 2.3244000 0.8013100 1.4217000 -0.0111980 -0.1428400 0.9676100 0.4361400 0.1206400 -0.0746780 -0.0796090 -0.0879770 -0.0879770 -1.1964000 -0.0070576 0.0000000 0.3556100 -0.1485000 0.4302400 -1.2465000 -0.1107700 0.3827000 -0.1247300 0.4196500 0.4216700 0.5032500 -0.6453700 -0.1396200 0.3503900 -0.0579240 -0.0579240 -0.1938700 -0.5941900 -0.5941900 -0.1752500 1.7594000 -0.6389700 -0.0486130 -0.0111980 -0.105 -0.105 0.337 0.212 0.378 0.000 0.733 -0.125 -0.140 0.000 0.000 0.125 0.319 -0.594 -0.594 0.502 0.677 0.436 0.436 1.422 1.422 -0.639 0.000 0.121 0.121 0.000 0.000 0.000 0.000 0.481 0.000 0.202 -0.131 0.424 0.424 -0.258 1.703 0.393 0.000 0.000 -0.105 -0.105 0.337 0.212 0.378 0.000 0.733 -0.125 -0.140 0.000 0.000 0.125 0.319 -0.594 -0.594 0.502 0.677 0.436 0.436 1.422 1.422 -0.639 0.000 0.121 0.121 0.000 0.000 0.000 0.000 0.481 0.000 0.202 -0.131 0.424 0.424 -0.258 1.703 0.393 0.000 0.000 6.876555 5.149572 3.613520 14.854034 9.476467 6.501046 7.666632 7.613520 9.801367 8.581611 6.149572 2.613532 9.844261 10.222329 12.058535 8.939051 10.867131 9.960477 9.371077 6.815154 3.751024 12.079087 1.291604 4.098950 4.935450 7.649144 9.738675 11.905381 11.779432 9.863345 8.257377 10.143341 6.734535 5.291593 12.962248 13.063288 10.198483 13.012264 7.548980 11.947570 6.520411 8.928217 1.291604 14.508641 5.846180 13.342801 10.691404 10.217680 9.029684 7.451463 12.125273 9.626982 9.033059 7.791438 10.793429 3.291589 1.876566 10.064731 10.465269 11.206724 12.957594 11.228966 8.857646 9.783445 11.017793 12.722306 7.657914 8.525212 10.031373 6.815154 11.3677396 11.9993825 NA 8.5769941 10.6752963 11.1181405 9.1053732 8.5862127 8.3250149 14.8540342 8.2104551 7.7178567 11.1085756 7.9850791 8.7754078 11.0084115 10.7168079 9.2600285 14.5047722 8.7136566 8.7591975 10.5942309 10.4937159 9.1619567 5.4615155 12.2577369 10.6247474 12.0831619 10.4400686 10.9498035 7.8372514 9.4387968 10.4602641 9.4739863 11.9083476 2.8765464 8.7713723 9.5243008 9.9833355 6.8614480 11.1947207 8.9282166 7.0729515 9.2044814 7.8538341 9.7510236 9.0092685 8.5754674 9.4182964 8.6044750 3.6135199 3.0989416 9.4912643 NA 9.4615171 6.2688723 11.7068056 8.8952184 9.6469431 9.3549872 0.2916036 10.8942909 13.2956369 10.0778617 11.0729518 9.9209486 10.2774340 8.8307510 5.1495724 9.2774339 9.3048309 NA 5.8461799 13.3864944 9.7303839 9.8288104 7.8189911 5.6135199 12.4053342 11.0296843 10.6202669 11.3353029 9.7743799 12.0305287 11.0431361 8.6403201 10.8812432 12.0406234 9.0794947 0.2916036 6.0729526 7.9812407 6.9354480 12.9756831 9.3710768 7.8229736 NA 8.8284996 8.5252119 8.5862127 7.7009827 8.1557781 11.3817045 5.9920319 5.3359870 TCGA-AG-3591 66 0 NA 0 rectum stage iia t3 n0 m0 25-9-2014 female 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 122.34.0 NA NA 4 3 3 3 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.22314352 10.65499889 12.03704611 8.07141624 9.55348953 10.09127802 2.94764746 0.04068206 11.62124328 2.04075219 7.89249850 10.12156667 9.26716145 8.81439949 10.26475081 10.99748831 0.6756900 0.6801200 -0.7745600 0.2769000 1.1573000 1.1573000 1.1573000 -0.1986200 0.6860800 -0.7453400 -0.2380200 -0.2490700 0.2741100 0.2741100 0.3108100 -0.6993800 -0.1709400 -0.2031100 -0.2031100 0.2877200 0.3116100 0.3116100 0.3116100 0.6189700 0.2588700 0.2270100 0.6756900 0.1955200 0.2451300 0.2378900 1.6311000 -0.0031489 0.0000000 -0.2517700 -0.7745600 -0.2337400 -0.2531000 -0.2732000 -0.7643300 -0.1986200 -0.1986200 -0.7514900 -0.2380200 0.2175200 -0.7118500 -0.1946200 -0.6993800 -0.6993800 -0.1709400 -0.1709400 -0.7239400 -1.2834000 -1.2929000 0.2877200 0.3116100 -0.1666300 -0.2989800 0.6189700 -0.199 -0.199 0.686 -0.751 -0.021 0.218 -0.193 -0.195 -0.699 -0.171 -0.171 -0.724 -0.203 -0.029 -1.293 0.119 -0.169 0.676 0.676 0.312 0.312 -0.167 -0.299 0.196 0.196 0.245 0.245 -0.754 0.000 0.270 0.030 -0.234 -0.234 0.050 -0.206 -0.762 0.395 0.272 0.272 -0.173 -0.199 -0.199 0.686 -0.751 -0.021 0.218 -0.193 -0.195 -0.699 -0.171 -0.171 -0.724 -0.203 -0.029 -1.293 0.119 -0.169 0.676 0.676 0.312 0.312 -0.167 -0.299 0.196 0.196 0.245 0.245 -0.754 0.000 0.270 0.030 -0.234 -0.234 0.050 -0.206 -0.762 0.395 0.272 0.272 -0.173 6.59533805 3.79563190 0.04068206 15.15010992 8.84810398 2.04075219 9.43306669 13.47120171 11.43574765 9.80810602 5.89873076 3.89873076 9.07003639 10.37558110 11.88329594 9.28154039 11.36577345 9.25628206 8.06865523 0.04068206 2.04075219 10.76184838 1.04075219 8.12289838 8.22810101 9.53159999 10.25324559 9.88388501 10.93556693 9.59916992 6.49196049 9.80727812 6.53260217 5.06311892 12.05215114 12.85853228 8.85292645 13.00680392 6.91726585 12.03704611 5.21067329 8.33995731 0.04068206 13.75263118 4.28867601 11.00689407 9.20691228 9.71934929 10.09127802 6.25991835 12.53672908 9.63880170 8.99930187 11.15969023 10.83109763 2.04075219 1.62569131 10.56480103 10.65775736 11.57480883 11.44349477 11.89034975 9.11355179 8.41795966 10.89132668 13.85898181 7.66645766 10.38781680 10.27496781 7.89873016 11.14698494 10.46491541 0.04068206 8.22314352 10.45807425 10.65499889 9.12821193 9.27676324 8.55250196 15.15010992 8.00941604 7.71317478 9.49196029 8.18285614 9.08377635 10.33479551 11.62500705 8.74888451 14.14050789 9.63600663 7.90493502 9.85051723 10.49453422 7.33995687 6.76866999 12.32296885 10.52052941 9.91956638 9.17774018 9.19809605 7.60893340 9.10549187 10.76099341 9.45437703 12.69694606 NA 8.44376121 8.24532024 9.86411633 10.49710356 11.95232840 8.33995731 9.52355706 7.05197672 6.69896020 9.27795918 10.20628424 8.57382590 4.12821090 9.78726349 NA -0.95931794 6.76866999 0.04068206 9.58667900 5.30753417 11.56013968 8.83353940 10.10279524 10.17581711 -0.95931794 9.89639629 14.38146858 9.65177393 11.62124328 11.00833568 9.22065813 8.59533805 5.38059786 10.02160270 9.67990897 -0.95931794 7.56431109 12.63938327 10.14075438 10.40816391 7.45860183 6.20062009 13.65067814 11.60941784 10.83881589 10.76056577 8.81439949 11.18317533 9.91265436 8.08240828 11.10380715 10.95812122 10.26475081 1.62569131 0.04068206 8.58772089 2.84809709 13.62905389 10.07966811 8.64807962 0.04068206 8.42311381 10.38781680 -0.95931794 7.90493502 6.37166689 12.04742589 3.56431719 7.95662881 TCGA-AG-3592 68 0 NA 0 rectum stage iia t3 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 122.34.0 NA NA 3 3 NA NA 3 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.434807 11.084848 11.469453 8.003650 8.910661 9.825088 2.881547 NA 10.755934 5.001847 7.956044 11.015533 9.965322 9.022732 9.512177 12.121619 -0.011013 -0.016780 -0.027875 0.503590 0.338080 0.338080 0.469640 -0.553750 0.491190 0.505130 -0.014778 -0.014778 1.556100 1.556100 1.508600 0.000000 0.465850 -0.026441 -0.026441 0.424520 2.245700 2.280900 2.344800 0.199390 -0.013119 -0.013119 -0.011013 -0.025862 -0.514240 0.128150 -0.226380 -0.258170 -0.261340 -0.016292 -0.039720 -0.541380 -0.018046 1.156200 -1.292900 -0.523280 0.060936 0.486640 -0.014778 -0.014778 -0.556570 -0.556570 -0.527470 0.000000 0.014330 0.467930 -0.026441 -0.842110 -0.562260 0.424520 -0.032587 -0.027945 -0.027261 0.199390 0.000 0.000 0.491 0.491 0.000 0.000 1.509 -0.557 0.000 0.466 0.466 0.000 0.000 -0.558 -0.558 0.425 0.425 0.000 0.000 1.022 1.022 0.000 0.000 0.000 0.000 0.491 0.491 -0.226 -0.226 0.000 0.000 0.504 0.504 1.814 1.814 -1.293 0.338 1.561 0.211 0.110 0.000 0.000 0.491 0.491 0.000 0.000 1.509 -0.557 0.000 0.466 0.466 0.000 0.000 -0.558 -0.558 0.425 0.425 0.000 0.000 1.022 1.022 0.000 0.000 0.000 0.000 0.491 0.491 -0.226 -0.226 0.000 0.000 0.504 0.504 1.814 1.814 -1.293 0.338 1.561 0.211 0.110 6.666331 4.139355 2.358002 15.310153 9.027763 4.058429 7.817423 5.112879 10.176973 9.270132 5.733032 3.750306 9.157273 10.182553 11.588162 9.757269 11.114548 9.438809 8.735202 4.784258 4.112875 12.945769 2.881547 6.171773 7.200342 8.266384 9.262626 11.191870 12.220242 9.244450 8.681047 9.882533 7.489849 5.276854 12.840169 12.706443 9.952783 12.773799 6.306359 11.469453 4.643394 8.743854 2.165333 14.333190 4.547814 12.583651 9.700622 9.890835 9.825088 7.429454 11.908017 8.285770 8.309276 10.013522 10.375148 1.165365 -1.642054 9.638762 9.939192 11.526350 12.597441 10.836003 9.117047 9.498182 12.172374 13.166503 7.388659 9.964397 10.379666 8.096084 11.5410067 11.2582924 -1.6420539 8.4348071 11.4880795 11.0848484 8.8407996 9.2128601 9.0170957 15.3101525 7.8932669 8.0233274 10.4837279 9.1685633 8.1028255 10.8655386 10.3295352 9.5586390 14.6865263 9.0063494 9.8372667 10.1344247 9.6793561 8.5963963 6.9164122 12.0782359 10.7928805 11.1938447 10.0290903 10.2509139 7.8747158 10.2482559 10.8296668 9.1892988 12.4740610 NA 9.3775823 8.7545107 9.9240457 8.2588585 12.7708922 8.7438539 6.1327783 7.8255974 8.3761918 9.6520379 9.4988215 8.4769329 7.3664201 8.5128096 NA NA 7.7243140 NA 9.2352757 5.4454552 11.3919308 9.2306666 9.8174232 9.5020125 0.9429836 10.8961806 13.5014147 9.0242158 10.7559336 10.2229516 10.2109113 8.9240455 5.0722387 9.4037513 11.1254934 -1.6420539 7.1781708 12.8231116 8.8795921 9.8194712 7.7048381 5.4769325 12.6983981 11.0110606 11.4877576 11.4885622 9.0227323 11.9071747 10.4304592 8.0215497 10.4381429 11.3427661 9.5121769 NA -1.6420539 7.8188365 0.9429836 14.0380214 9.7599378 8.2931566 -1.6420539 8.7689412 9.9643969 1.1653653 6.7631327 8.5428670 11.8903476 4.4023879 5.3352724 TCGA-AG-3593 72 0 NA 1035 rectum stage iia t3 n0 m0 25-9-2014 female 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 1 1 3 NA 3 1 4 4 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 1 2.01147e-06 6.242493e-07 9.376334 11.117339 11.778676 8.353686 9.446510 9.365054 4.297830 NA 10.351401 4.219827 8.224830 10.457173 9.781224 9.593401 9.307293 11.094982 0.453260 0.448840 0.027076 -0.273680 -0.327740 -0.864210 0.081322 -0.341710 1.122500 0.076932 -0.469080 -0.469080 0.625420 0.625420 2.146500 -0.490890 0.029044 0.157110 0.163250 0.000000 1.584700 2.020600 3.163700 -0.192530 -0.515170 -0.515170 -0.515170 0.126530 0.137320 0.077142 -0.402720 -0.365330 -0.421600 0.055800 0.027076 -0.273680 -0.273680 0.017124 -0.912260 -0.381020 -0.358800 0.058886 -0.469080 -0.493710 -0.825700 -0.864990 -0.442210 -0.490890 0.044857 0.027950 -0.864210 -0.862550 -0.862550 0.000000 0.174520 -0.842110 -0.348240 -0.192530 -0.359 -0.359 0.000 0.000 -0.469 -0.469 0.579 -1.293 -0.491 0.000 0.000 -0.707 0.157 -0.863 -0.863 0.000 0.000 -0.066 0.449 0.124 1.091 -0.842 -0.348 0.124 0.124 0.593 0.593 -0.403 -0.403 0.000 0.000 -0.274 -0.274 0.000 0.000 -0.887 0.000 -0.347 -0.347 -0.111 -0.359 -0.359 0.000 0.000 -0.469 -0.469 0.579 -1.293 -0.491 0.000 0.000 -0.707 0.157 -0.863 -0.863 0.000 0.000 -0.066 0.449 0.124 1.091 -0.842 -0.348 0.124 0.124 0.593 0.593 -0.403 -0.403 0.000 0.000 -0.274 -0.274 0.000 0.000 -0.887 0.000 -0.347 -0.347 -0.111 7.55769957 5.69376014 0.04990952 15.38424245 9.24712170 6.89539473 9.60832561 9.51751055 10.14530196 9.92795584 7.07227305 4.37183065 9.67012474 10.98948412 11.36901246 9.33530705 11.76286174 9.67926157 7.94472260 2.63487202 3.50934114 9.86528818 3.37183762 5.98064229 6.21983065 7.03858982 10.138693 11.291292 11.966904 10.567574 8.569541 10.556708 7.998272 6.027185 12.134713 13.252182 9.448649 13.871779 7.115995 11.778676 6.634868 8.668290 3.634872 14.096091 4.573465 12.232610 9.555716 9.739903 9.365054 7.831265 12.167873 10.502146 8.814777 11.838215 10.338771 1.634872 1.049910 9.931019 10.582261 11.664615 13.243584 11.387527 8.021449 9.254476 11.034259 13.171115 7.126721 9.589064 10.842695 8.420592 11.30552366 11.10992524 0.04990952 9.37633445 11.21355458 11.11733927 8.87008386 8.38975479 8.71520528 15.38424245 8.87327215 7.90788571 9.45504646 8.42928329 9.45717277 10.75467317 10.11060089 9.76174386 14.58882131 8.70095671 9.60257398 9.56165759 9.51342936 9.86368607 7.31669154 12.09771047 10.75812667 10.86528818 9.88121218 10.12404633 8.12490243 9.62544420 10.95904793 9.83453979 12.00895413 2.04990952 8.79137195 9.06930099 10.01424579 8.95979797 12.77846320 8.66829041 7.88279465 7.28830965 8.29783245 9.08332800 9.22732449 7.28830965 9.95979797 8.60065185 1.04990952 NA 8.25447594 2.04990952 9.75553724 5.33530817 11.20092146 8.81477663 9.30493353 9.30964824 0.04990952 10.74426278 13.19583706 9.26179312 10.35140108 10.22358207 9.91099178 9.26665070 3.75034924 10.25325292 10.12977628 NA 7.75034455 12.75661676 9.87804141 10.13471329 7.35368586 5.88279465 12.53422432 10.95152609 11.21166664 10.37070549 9.59340083 11.94396475 10.79473873 8.49698796 10.00938525 11.57542570 9.30729281 2.37183762 0.04990952 8.15004172 4.57346542 13.25355878 9.32602921 8.22981381 2.85726444 8.66461474 9.58906365 1.04990952 7.57346693 7.43360881 11.99021851 4.13736417 8.12672047 TCGA-AG-3594 77 1 61 0 rectum stage iia t3 n0 m0 25-9-2014 male 2007 NA NA rectal mucinous adenocarcinoma yes r0 0 NA NA 42.51.0 2 2 4 NA 1 1 4 3 5 3 NA NA 6 0 2 0 4 0 0 0 0 0 0 0 0 0 7 6 0 0 2 0 4 0 0 0 0 0 0 0 7 9.710544e-07 4.855272e-07 8.78080089 11.30086542 11.98372514 7.81872340 8.97344597 10.61925700 0.09085343 3.41272734 9.74005917 NA 7.50019416 10.39800377 9.75079875 9.53660410 10.52438843 8.20454522 0.00000000 0.00000000 -0.00097017 0.00263570 1.90060000 1.28300000 0.69634000 -0.00531990 0.01235700 -0.67380000 0.65866000 0.65866000 1.99250000 1.99250000 -0.66031000 0.00777830 -0.00912860 -0.00027724 -0.00027724 -0.05832700 -0.00027724 -0.00027724 -0.00027724 -0.57081000 -0.01450300 -0.01450300 -0.67619000 -0.02104400 -0.00268070 0.00958830 -0.01134300 0.01684500 0.00666530 -0.00097017 -0.00097017 0.00263570 -0.69153000 0.00235810 -0.68597000 -0.00531990 -0.00531990 -0.67380000 0.65866000 0.64744000 0.00513590 -0.01087300 0.00273710 0.00777830 -0.00912860 -0.00912860 -0.68378000 -0.66929000 -0.66929000 -0.05832700 0.02595200 0.01111700 -0.01106000 -0.57081000 0.000 0.000 0.000 -0.674 0.659 0.659 -0.660 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.662 0.662 0.518 0.000 0.000 0.000 -0.674 0.659 0.659 -0.660 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.662 0.662 0.518 8.260728 6.394584 1.675771 13.724870 9.944112 4.412734 8.660658 3.550236 10.712855 12.241502 8.270712 6.199327 9.566536 10.273197 10.985621 8.333977 10.275678 9.435099 7.910982 3.550236 2.675771 11.689786 5.483119 8.756139 6.997693 8.146085 9.817021 9.958082 10.477743 8.162265 8.314805 10.151499 7.698133 4.997694 12.269468 13.192943 10.020061 13.211689 8.124226 11.983725 7.146085 8.151499 3.412727 13.722321 2.675771 12.194746 9.345831 10.143996 10.619257 8.408216 13.010597 9.421720 9.443950 12.631173 10.266976 2.675771 NA 9.705513 10.100632 11.769843 11.286790 11.013387 7.936293 8.709189 10.629913 13.273508 6.858987 10.542014 10.201939 6.948784 12.25035897 11.07022810 1.09078570 8.78080089 10.04935564 11.30086542 9.56450869 8.81190222 8.76676012 13.72486976 5.61436532 7.93000694 11.27629787 8.76676012 8.24562116 10.83058358 11.30572912 9.28615042 14.03917017 9.08515640 8.46584227 9.88521880 9.66634225 7.83899587 5.79124365 12.07094251 10.04208765 8.23546141 10.33635559 10.22394510 7.83899587 7.94255204 10.15149888 9.63576745 12.63526273 -1.50881390 8.94255204 8.82859096 10.99242410 8.56247827 12.82720486 8.15149863 8.80160943 6.80504863 7.49168237 10.40595249 10.19540174 8.73299905 7.55840847 8.89493384 NA NA 9.11870882 NA 10.45712515 6.33873104 11.92645864 8.39001113 10.61043921 10.23800782 2.09081956 10.66445013 13.76411202 10.22265992 9.74005917 11.15487202 9.96885381 8.39458359 0.09085343 9.61436495 9.90490462 NA 6.19932684 12.83395434 9.47455042 10.37041355 7.30025645 6.06808390 12.78472542 10.80246992 9.79643536 11.00742882 9.53660410 11.71559840 10.47882027 8.39914203 10.40827210 11.14879464 10.52438843 4.55023579 2.09081956 7.95919345 5.17826448 13.44146592 8.66065842 9.08232471 0.09085343 9.30529205 10.54201403 0.09085343 7.61436459 6.70551213 11.59958811 4.09080263 6.56653663 TCGA-AG-3598 69 0 NA 1522 rectum stage iia t3 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 6 1 NA 3 3 4 3 5 3 NA NA 7 0 0 4 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 4 4 0 0 0 0 0 0 0 4 1.942109e-06 5.895688e-07 6.481969 10.248497 11.867831 7.710787 8.701137 9.504336 NA NA 10.788030 2.803888 7.459249 10.282868 9.608673 9.522340 9.806149 11.387355 -0.0105080 -0.0149160 0.0108420 0.0075000 -0.0173910 -0.0173910 1.0992000 1.0923000 -0.0162920 -0.0162920 -0.0266170 0.0037465 -0.0081624 -0.0081624 -0.0081624 -0.0195340 -0.0205490 -0.0117490 1.1433000 -0.0391220 1.0838000 1.0838000 1.0838000 0.0178900 -0.0105080 -0.0105080 -0.0105080 0.0112610 1.1438000 0.0026357 0.0083351 0.0083351 -0.0008316 0.0108420 0.0108420 -1.0326000 0.0075000 0.0016920 -0.0173910 -0.0059522 -0.0177120 -0.0162920 0.0037465 0.0037465 -0.9601600 -1.0108000 0.0068044 -0.0195340 -0.0205490 -0.0205490 -0.0117490 -0.9828400 -0.9828400 -0.0391220 1.0838000 0.0022193 -0.0623610 0.0523830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.932 0.000 0.000 0.000 -1.000 0.000 -0.969 -0.969 0.000 0.000 0.000 0.000 1.084 1.084 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.099 1.099 1.099 1.099 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.932 0.000 0.000 0.000 -1.000 0.000 -0.969 -0.969 0.000 0.000 0.000 0.000 1.084 1.084 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.099 1.099 1.099 1.099 0.000 7.504336 5.388858 1.481971 15.137927 9.263328 4.289325 9.040389 3.289318 10.674261 11.507108 6.651894 3.481971 10.206482 9.760418 11.343055 8.661877 10.382835 8.758093 7.424483 5.005530 4.182406 11.198788 2.481971 7.209889 7.710787 8.969808 9.1003541 10.6767254 11.9907537 9.2860996 7.3888594 9.8482907 7.1684685 5.4361652 12.3665207 13.3262820 9.2860996 13.1090463 6.7857493 11.8678309 7.0669309 7.6215200 0.4819189 14.5476371 3.2893181 12.9645244 9.6914218 9.2614909 9.5043364 7.4244829 11.6908125 9.3554125 9.7650568 10.5839442 10.4959890 2.4819705 0.4819189 8.5480578 10.4317952 11.7725634 13.0760598 11.3805699 7.5372510 8.4008316 10.7925359 13.4511751 7.8742861 9.0744254 9.8173588 6.8038960 10.9186801 11.2360209 NA 6.4819689 10.2941458 10.2484974 8.5641175 8.7993810 8.3211723 15.1379268 8.4303359 6.7857493 9.8128853 8.3399493 8.2893236 10.5707567 10.4833767 9.2675189 14.0056530 9.3337176 8.3767861 10.2351853 10.2763844 8.5426643 5.4819673 13.0713856 10.3446058 10.3368369 9.3085170 9.8240432 8.5683700 9.7510951 10.6431004 8.1824083 12.7789593 NA 8.7011370 8.6130023 10.1684690 8.3707118 13.1021883 7.6215200 6.4361652 7.8570081 6.8570081 9.5208876 8.8262644 8.5921647 6.8038960 8.3828354 NA NA 7.5043360 0.4819189 9.5453636 6.2893236 11.5487305 8.6163948 9.8395205 9.8482907 3.0669330 10.6176778 13.7955602 9.1076774 10.7880302 10.5587841 9.3274586 9.2633281 4.5694303 10.3858503 10.7295282 NA 5.1824063 12.8309732 11.0312815 8.7393563 7.5043360 5.2893218 13.1734939 11.7481694 10.9300848 11.1919139 9.5223404 11.7101860 10.8742860 7.9897629 10.2416903 11.7089827 9.8061491 3.2893181 2.8038883 8.0748741 5.1824063 13.7853212 9.0094454 7.5800007 0.4819189 8.8550946 9.0744254 NA 7.8482906 6.8218186 11.4484739 3.8038986 7.0365572 TCGA-AG-3599 70 0 NA 366 rectum stage i t2 n0 m0 25-9-2014 male 2007 NA NA NA yes r0 0 NA NA 42.51.0 1 3 1 NA 1 1 2 3 5 3 NA NA 7 4 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 4 0 0 0 0 0 0 0 0 1.803387e-06 4.855272e-07 8.13590676 10.80462055 12.33347933 8.25520565 8.79834802 9.90873892 2.27792525 -0.04394335 10.73489613 2.76334783 7.73735755 10.68731671 10.54283745 10.35992577 10.32231982 11.86476554 0.0104240 0.0104240 -0.0020784 0.0038854 0.0403000 0.0403000 0.0430150 -0.0433300 -0.0073339 -0.0073339 0.0134920 0.0134920 -0.0016629 -0.0016629 -0.0016629 -0.0125030 -0.0312230 -0.0169790 -0.0169790 -0.0289320 1.1018000 1.1018000 1.0825000 0.0235660 -0.0364050 0.0104240 0.0104240 -0.0146410 0.0000000 -0.9294900 -0.0039127 0.0197830 0.0197830 -0.0020784 -0.0020784 0.0038854 0.0038854 0.1707000 0.0367940 -0.0102320 -0.0198860 -0.0073339 0.0134920 0.0032926 0.0168450 -0.4404400 -0.0052610 -0.0052610 -0.0312230 -0.0312230 -0.0169790 0.0075000 0.0075000 -0.0223320 1.1018000 -0.9387200 -0.0387140 0.0235660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.082 1.082 -0.939 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.082 1.082 -0.939 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.000 0.000 7.26888068 4.12592381 -0.04394335 15.92834589 10.03681513 3.41543419 9.13341711 11.97940547 10.06713329 10.65209583 6.22278331 3.76334783 9.55962392 10.15198499 12.93094992 8.91309974 10.50770596 9.30472572 7.83864046 2.27792525 3.41543419 10.86888697 2.27792525 6.88673547 7.06452183 7.79520134 9.79991863 10.61331607 12.22249139 9.25291374 8.02745985 9.84321821 6.31354880 5.04346262 12.20540742 12.92466444 9.49127310 13.13045525 6.85081567 12.33347933 6.00039218 8.66680416 2.76334783 14.44691119 4.12592381 13.12983091 9.73243067 9.82944178 9.90873892 8.09554893 12.57575911 8.95035118 8.91019389 12.35741053 9.88081009 2.54096958 -0.04394335 9.42767279 10.45285145 11.21985364 12.89281958 11.53813964 8.88673486 8.72418196 11.39529870 13.29640413 7.14582212 9.40720870 10.31134871 6.73735687 12.05501665 11.13652844 -0.04394335 8.13590676 10.85610972 10.80462055 8.98113712 8.20866308 8.08528071 15.92834589 8.93899114 8.17516628 10.92538420 8.43981343 8.89557680 10.91889364 11.37385018 9.16267027 14.50059991 8.82636226 8.70419035 10.60345610 10.47465080 8.39478935 6.65643773 12.22600091 10.40411398 11.20511108 10.20155031 9.93899129 7.76116092 9.17999938 10.93184561 9.42563952 12.49395857 -1.64340542 8.96442636 8.77895070 10.16056881 8.68051143 13.31807845 8.66680416 6.89851191 8.56332785 7.72418230 9.90144151 9.66508147 9.01128010 8.08528071 8.51441819 NA NA 7.71754894 -0.04394335 9.95317719 5.27792525 11.82095755 9.36750867 10.22161274 10.37911352 NA 10.80305497 13.51501617 9.94751947 10.73489613 10.43274388 9.87635057 8.89557680 2.54096958 10.50289216 10.72967257 NA 6.06452291 12.98079104 10.73519171 10.45085328 7.23500419 5.34831387 13.07882564 11.12090456 10.91092098 10.44885223 10.35992577 11.87038279 11.04346051 8.76656932 10.26451872 11.82867251 10.32231982 4.20392154 3.54095718 7.07130146 5.83864172 13.84569173 9.57070750 8.58535430 1.54096958 8.93899114 9.40720870 2.54096958 7.99491683 7.16545073 11.37015431 4.47956041 7.01127982 TCGA-AG-3600 62 0 NA 184 rectum stage iiic t3 n2 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 31 NA NA 42.51.0 2 6 4 NA 1 1 4 3 5 3 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2.496997e-06 6.589298e-07 8.67677092 10.16709645 12.01951946 8.00806944 10.22387791 10.00519266 0.03646817 NA 10.32769657 3.49596372 7.15546692 10.85750256 10.10798818 9.73387577 9.31961432 12.18182120 0.085221 1.571200 0.094346 0.947110 0.099288 0.099288 1.602500 -0.597210 -0.581370 -0.174490 0.811230 0.811230 -0.399190 -0.399190 -0.399190 -0.594850 0.116240 0.046707 0.095860 0.372950 0.095363 0.095363 0.095363 -0.109850 -0.643680 0.096971 0.085221 -0.632160 0.035947 0.288890 0.833730 -0.567730 -1.204100 0.094346 0.094346 0.964730 -0.575750 -0.607570 -0.586080 -0.583920 -0.547810 -0.795360 0.811230 0.093795 -1.127000 -0.596330 -0.594850 -0.594850 -1.223200 -0.573180 -0.061862 -0.567830 -0.570800 0.463310 -0.571120 0.123580 0.061651 -0.109850 0.000 -0.514 -0.581 -0.174 0.717 0.000 -0.399 -0.539 -0.595 0.116 -0.457 0.000 0.000 0.722 0.155 0.373 0.000 0.000 0.719 -0.565 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 -0.570 -0.570 -0.583 0.000 0.000 -0.551 0.677 0.000 -0.586 0.858 -0.530 0.000 -0.110 0.000 -0.514 -0.581 -0.174 0.717 0.000 -0.399 -0.539 -0.595 0.116 -0.457 0.000 0.000 0.722 0.155 0.373 0.000 0.000 0.719 -0.565 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 -0.570 -0.570 -0.583 0.000 0.000 -0.551 0.677 0.000 -0.586 0.858 -0.530 0.000 -0.110 8.479469 6.321928 2.036538 14.021640 9.091808 7.303312 9.286824 NA 9.596859 10.296269 6.495957 4.943415 10.303312 9.935883 11.290373 8.540352 10.375262 9.456486 7.979040 6.495957 3.736962 11.815014 NA 7.312651 6.186273 7.504132 9.67133690 9.98635262 10.86307436 9.07544492 8.09180824 9.59494653 7.52034131 4.94341503 10.72477619 12.96059607 9.46488612 12.84950534 7.70951673 12.01951946 7.73001289 8.70541087 1.62147756 13.92755007 3.03652092 11.87415383 8.86941587 9.72477611 10.00519266 8.29862074 11.89022528 9.77967734 8.69830392 11.78513807 10.22881869 3.73696199 0.03646817 10.16193931 10.95091102 11.15935388 11.34600222 12.13718822 10.38627154 8.08637458 10.67493461 13.11651058 6.85670439 9.46697841 10.06857166 6.97903985 11.51731610 11.14308884 0.03646817 8.67677092 10.49082521 10.16709645 8.79807709 8.56008784 8.10261509 14.02164024 4.03652971 7.63643902 11.01452121 7.75077129 8.73001289 11.10798825 10.57955769 9.37010607 14.32265042 8.82768885 8.57568483 10.62991701 9.21394553 8.11867482 6.94341620 12.75034195 10.81788559 11.00591243 9.92526914 10.38303959 7.96133856 9.12928302 10.77546255 8.61017295 13.18945712 -1.56277226 8.95538924 9.41503757 10.33573390 8.71952059 12.41590425 8.70541087 7.42884336 9.74733234 7.88201571 9.75248786 9.40503230 8.45631745 7.00230984 8.69830392 NA NA 7.65857782 NA 11.16323033 6.03652531 12.45964178 9.18118407 9.64385619 10.45332342 0.03646817 11.13192292 13.91198728 9.65123578 10.32769657 10.24354021 9.59876827 8.87572970 2.03653850 9.99072219 10.18512953 NA 5.84388086 13.16032397 10.05150873 9.96578428 7.19316557 4.89450737 12.70541087 11.37637586 11.51124584 11.39956553 9.73387577 12.08126149 11.47479791 8.40721337 11.30022934 12.27044508 9.31961432 1.62147756 1.03653850 7.78954212 5.08092196 13.90419073 9.29626903 8.30798901 1.03653850 8.35845385 9.46697841 2.03653850 8.08091983 7.15546692 11.37079915 4.99072347 6.84388086 TCGA-AG-3601 68 0 NA 0 rectum stage iiib t4 n1 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r2 2 NA NA 42.51.0 3 4 4 NA 1 1 4 4 5 1 NA NA 7 0 0 0 0 0 4 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 4 0 0 0 0 0 4 2.6704e-06 1.040415e-06 7.183945 9.686445 12.055271 7.419433 8.889883 9.807606 NA NA 11.149647 4.131853 7.055621 10.669189 9.485263 9.741900 9.534241 11.639651 0.7589100 -0.0046925 -0.6655000 0.7098300 0.4250300 2.1774000 1.4718000 -0.0249350 0.0000000 -0.0190060 0.3366600 0.4278800 1.5555000 1.5555000 1.6493000 -0.0471320 0.6914800 0.7025100 1.6342000 -0.1490100 3.6569000 3.6569000 3.6569000 0.1204900 -0.7542600 -0.0076101 0.7783000 -0.0530710 0.0315770 -0.0027707 0.7436600 -0.6592900 -0.6592900 -0.0189020 -0.7021900 0.5819300 -0.2229300 0.6227900 -0.8163000 0.0283410 -0.0267000 -0.0190060 0.4317600 0.2851800 -0.7172000 -0.7172000 -0.0147780 -0.0147780 0.6914800 -0.0486130 -0.7804900 -0.6992000 -0.7102900 -0.1490100 -0.1174300 -0.0169790 -0.1107700 0.1204900 0.000 0.000 0.000 0.000 0.337 0.337 1.613 -0.717 0.000 0.691 0.000 -0.078 0.703 -0.699 -0.699 0.000 0.599 0.000 0.000 -0.117 3.657 0.000 -0.111 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.582 0.582 2.207 0.571 -0.756 0.645 0.000 -0.653 0.108 0.000 0.000 0.000 0.000 0.337 0.337 1.613 -0.717 0.000 0.691 0.000 -0.078 0.703 -0.699 -0.699 0.000 0.599 0.000 0.000 -0.117 3.657 0.000 -0.111 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.582 0.582 2.207 0.571 -0.756 0.645 0.000 -0.653 0.108 6.48733681 6.53624566 3.62935662 15.28170787 7.98103120 5.82575256 8.01017784 4.68824751 9.67375003 8.72738785 5.68825031 0.04432417 9.66277891 9.58742519 11.91128584 8.91167211 10.73439133 9.12654239 8.56402942 8.08878771 3.74482846 12.16657424 NA 4.62935662 5.92703598 8.39754030 9.60089934 10.84529324 12.02024129 8.73439124 7.63685007 9.37754871 6.59898148 3.85174904 13.21071336 13.51670339 9.41508068 12.85717230 6.78586045 12.05527105 6.34817398 8.95428648 NA 14.90746645 6.47065887 12.56157058 9.53424120 9.69284074 9.80760576 7.70972900 12.05107004 8.67375003 8.12120868 10.91552852 9.71504960 1.62933330 0.04432417 9.24651711 10.07919235 11.45112980 12.97272665 11.51606855 9.53424120 9.20426472 11.39417766 13.11081894 7.21431815 9.32284279 10.36067483 7.25384654 11.31702311 11.22118978 NA 7.18394498 10.54921229 9.68644502 8.68463818 8.69544511 8.41071549 15.28170787 8.71327824 7.50382494 9.79258616 7.09967603 8.77910308 10.57187037 11.10980944 8.95245559 14.20166130 9.50587287 8.16333419 11.06953288 10.13318152 8.58355218 4.13185285 12.39946908 11.35954291 12.13086132 9.53424120 10.10508927 8.12120868 9.32516399 10.68101795 8.19921149 12.03314545 -1.55512094 8.74829685 9.58302841 10.05142064 7.51199927 11.33556404 8.95428648 8.22430224 8.74829685 7.42809799 8.83880904 9.41289984 9.86556147 6.88988356 8.58355218 7.22430273 2.04439412 7.13185593 1.04439412 9.37754871 5.68825031 11.52669709 8.57187018 9.68463818 9.62370923 NA 10.56795532 13.67875063 9.33671497 11.14964711 10.43348686 9.84205486 8.40194527 5.65910254 9.44953476 9.98425168 NA 2.62935662 13.19556847 10.48630007 10.06676113 6.29232163 4.50382574 13.02809952 11.48733681 11.41780231 11.12521087 9.74189956 11.26416688 10.80094963 8.44099828 9.71743738 11.25628165 9.53424120 NA 0.04432417 8.52756419 5.95128471 13.33944476 9.30883592 7.71681878 NA 8.77411595 9.32284279 3.36632221 7.35727663 8.91783749 11.17238763 3.95128005 6.34817398 TCGA-AG-3602 66 0 NA 0 rectum stage iiic t3 n2 m0 25-9-2014 female 2007 NA NA rectal adenocarcinoma yes r0 5 NA NA 42.51.0 2 6 1 NA 1 1 4 3 5 3 NA NA 7 0 0 4 4 0 4 0 0 0 0 0 0 0 4 7 0 0 0 4 4 0 4 0 0 0 0 0 4 1.109776e-06 4.508467e-07 7.669426 8.915300 11.505732 7.826295 7.558005 9.422869 3.044936 NA 11.184487 2.781905 7.390710 9.602080 9.871484 9.793083 9.006867 10.070998 0.00847260 0.00235790 0.00000000 0.88229000 -0.00443120 -0.00443120 -0.00443120 0.01209700 0.00805670 -0.00055444 -0.82350000 -0.75184000 0.81947000 0.81947000 0.81947000 0.02525000 0.02581200 0.04060900 0.04060900 0.00680440 0.89588000 0.89588000 0.89588000 -0.13368000 0.01866300 0.01866300 0.00847260 -0.02507200 0.00812480 0.01405100 0.00861350 0.00861350 0.03863000 0.00000000 0.00000000 0.88446000 -0.77682000 -0.00065396 -0.00401620 0.01209700 -0.79728000 -0.00055444 -0.75184000 -0.75063000 -0.76723000 -0.76723000 0.02525000 0.02525000 0.02581200 0.02581200 -0.79407000 -0.76432000 -0.76432000 0.00680440 -0.78159000 0.02216400 -0.78631000 -0.13368000 0.000 0.000 0.000 0.000 -0.752 0.000 0.819 -0.767 0.000 0.000 0.000 -0.773 0.000 -0.766 -0.766 0.000 0.000 0.000 0.000 -0.782 0.114 -0.751 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 -0.744 0.000 0.000 0.000 0.000 0.000 0.000 -0.134 0.000 0.000 0.000 0.000 -0.752 0.000 0.819 -0.767 0.000 0.000 0.000 -0.773 0.000 -0.766 -0.766 0.000 0.000 0.000 0.000 -0.782 0.114 -0.751 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 -0.744 0.000 0.000 0.000 0.000 0.000 0.000 -0.134 7.4599725 5.6694265 2.7819052 14.6928605 7.9437883 3.2673260 6.7079002 2.0449186 11.1332818 9.4514947 6.1323979 3.6298928 11.4206987 9.2673277 10.4739932 9.0635992 10.1464732 7.8262949 6.3668625 7.3668633 3.9194068 11.5334449 0.4599561 6.5260625 9.0673031 7.1878934 8.869364 9.854435 12.547104 7.869364 7.146473 8.305463 6.317953 6.763753 11.813120 12.498892 8.898765 13.172285 5.947009 11.505732 7.843677 8.214860 3.267326 13.486323 4.547437 12.350237 8.654729 8.244542 9.422869 7.482341 11.730268 9.107431 8.947813 10.372862 9.629898 1.459956 2.044919 8.419974 9.999132 10.792009 12.043526 12.465948 8.318886 8.471200 10.411214 13.393663 7.860852 8.146473 9.860852 7.619844 10.686385 10.726759 NA 7.669426 9.547436 8.915300 7.999131 8.454326 8.804269 14.692861 7.763753 6.951826 9.396611 8.552730 9.063599 9.462788 10.401020 9.107143 14.431786 9.975673 7.471200 10.741903 10.918379 8.454326 7.305463 12.595361 10.339556 11.014562 8.146473 8.813120 8.869364 9.552730 9.867240 8.286521 11.978660 -1.139554 8.425757 9.270544 8.688791 7.526062 12.524042 8.214860 5.044936 8.795363 6.869363 8.311722 9.405417 8.239101 4.366861 8.609720 NA NA 7.029828 1.459956 7.959819 5.919404 11.736679 8.890425 10.052430 9.078358 3.919407 9.629898 12.763468 8.731436 11.184487 9.939753 9.419975 8.669426 4.459976 8.465597 9.625407 NA 5.414169 13.027216 10.283101 10.050560 7.867410 4.267326 12.727930 12.567517 12.040702 10.356305 9.793083 10.350237 10.587967 7.267328 11.406704 10.464193 9.006867 3.044936 2.044919 10.297459 3.629893 13.948943 8.882037 7.536788 NA 7.991354 8.146473 NA 6.707900 7.745375 11.939248 4.459976 5.103829 TCGA-AG-3605 85 0 NA 30 rectum stage iv t3 n1 m1 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r2 3 NA NA 42.51.0 2 6 4 NA 3 1 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 1.560623e-06 6.936103e-07 7.169129 9.940505 11.645422 6.377238 9.102311 9.001146 3.118509 NA 10.231501 2.633082 6.850307 11.107999 9.925858 10.067705 9.705611 11.522428 0.0444700 0.0340100 -0.0783120 0.0055898 0.2601700 1.8204000 0.9337100 -0.0176790 -0.0137320 -0.0268150 0.0000000 0.0000000 0.1716200 0.1716200 0.1939400 -0.0010719 -0.0190100 0.0268320 0.0268320 -0.0179040 0.6290000 0.7448500 0.7448500 0.0499800 0.0444700 0.0444700 0.0444700 -0.0353340 0.0718600 0.0718600 -0.0055007 -0.0055007 -0.0177670 -0.0386780 -0.0783120 0.0055898 -0.0096439 0.8292600 -0.8915700 -0.0176790 -0.0031491 -0.0268150 0.0000000 0.0032279 0.0083721 0.0083721 -0.0010719 -0.0010719 -0.0190100 -0.0147250 -0.8415300 -0.5747700 -0.5520400 -0.0179040 -0.0749090 -0.0049513 -0.0147420 0.0499800 0.000 0.000 0.000 0.000 0.000 0.000 0.194 0.000 0.000 0.000 0.000 -0.842 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.840 0.840 -0.827 -0.538 0.857 0.857 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.194 0.000 0.000 0.000 0.000 -0.842 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.840 0.840 -0.827 -0.538 0.857 0.857 0.000 6.440431 5.265343 1.311154 14.869651 8.947773 3.770575 6.911061 3.770575 10.131327 9.980033 6.118503 3.311154 10.551940 9.561447 11.960854 8.745776 10.463433 8.850307 8.294142 1.311154 1.311154 9.776715 NA 7.118503 7.169129 9.004635 9.1503520 10.1891992 12.0215242 8.7205391 7.4910570 8.6948527 7.1937915 5.5206014 12.2725979 12.3026701 9.4885678 12.5483582 6.2653450 11.6454215 6.8810038 7.9036053 1.8961168 14.0292530 4.9550059 13.2485221 9.9513931 8.7818885 9.0011461 6.7540911 11.3307390 9.6554441 8.9513931 10.9212504 9.8503070 NA 0.3111543 8.8149740 10.4747979 10.3946275 12.6618112 11.4519780 8.3772374 8.4760552 10.6079842 12.7830774 7.6509986 9.1876653 9.9054729 7.8268478 12.1193080 11.5102071 NA 7.1691293 10.1023112 9.9405049 8.4144362 8.8847954 8.6642951 14.8696515 9.2089937 7.2059662 11.0966007 9.0185073 8.9550044 10.5291060 11.0373664 9.1863139 14.0065941 9.6194873 7.7705800 10.3879639 11.0433157 8.4144362 6.8810038 13.0318200 10.5120469 10.3839508 9.7268900 9.7889065 8.1876653 8.7416008 10.4785664 8.2536627 12.3274447 2.3111543 8.7416008 8.9249378 10.1440382 8.1753345 12.1968446 7.9036053 5.9835728 7.7120276 6.3986103 9.1876653 9.5423695 10.3712497 6.2418859 9.0726994 NA NA 7.0526148 1.3111543 8.9036053 6.1691293 11.9630969 8.4300895 10.6565535 9.8638174 NA 10.9295338 14.0597604 10.1768815 10.2315012 10.5435692 9.5083649 8.6420651 4.8347112 9.1120482 9.5061759 NA 6.2418859 12.8551467 10.1691293 10.4417189 7.4196729 4.7034662 13.3601459 11.5059051 11.2573235 11.1998915 10.0677046 10.9702522 10.5034411 8.0925082 10.0922948 11.5132721 9.7056110 0.3111543 1.3111543 8.1558226 6.3772383 13.2402217 8.5732431 7.2769321 NA 8.7389222 9.1876653 1.3111543 6.8961108 8.0593412 11.5661768 5.5965506 4.2180372 TCGA-AG-3608 79 0 NA 485 rectum stage iia t3 n0 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 6 3 NA NA NA 4 3 5 3 NA NA 0 0 4 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 4 1.491262e-06 4.855272e-07 7.919975 10.613058 12.864523 7.877628 9.114853 9.433653 3.460546 NA 10.789830 1.586068 7.229930 11.225716 9.502949 9.710195 9.793902 11.212391 -0.0077482 -0.0077482 0.0150280 0.0144700 -0.0022162 -0.0022162 -0.0108570 -0.0114730 0.0000000 0.0000000 -0.0396650 0.0245250 0.0157270 0.0157270 0.0157270 -0.0085766 -0.0331320 0.9689000 0.9689000 -0.1018400 2.9723000 2.7773000 2.8689000 0.0669450 -0.0077482 -0.0077482 -0.0077482 -0.0219210 0.0100060 0.0100060 0.0327040 0.0327040 0.0327040 0.0150280 0.0150280 0.0144700 0.0090501 0.9846200 -0.0022162 -0.0114730 -0.0114730 0.0000000 0.0245250 0.0413170 -0.0067813 -0.0067813 -0.0027707 -1.2929000 -0.0331320 -0.0331320 -0.9589100 -0.8726000 -0.8726000 -0.1018400 -0.9119800 0.0186630 -0.0824690 0.0669450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.037 0.969 -0.904 -0.904 -0.102 -0.102 0.000 0.000 0.816 2.869 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.985 0.985 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.037 0.969 -0.904 -0.904 -0.102 -0.102 0.000 0.000 0.816 2.869 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.985 0.985 0.000 0.000 0.000 0.000 0.000 7.742578 5.644967 NA 14.251370 9.630468 6.492965 6.109636 3.808467 10.205682 10.646770 6.955308 4.393430 10.681471 9.711918 11.142580 8.559532 10.653060 8.516811 8.496966 6.476845 4.249036 10.208126 2.586068 6.859092 6.966895 8.017920 9.435740 10.861422 12.529565 8.883754 7.729032 9.837162 7.769296 5.834001 13.081596 13.025905 9.624993 12.916991 6.687612 12.864523 6.586074 8.190936 3.701549 13.093373 5.323039 12.688268 9.859092 9.492964 9.433653 7.775899 12.106038 9.237126 8.892895 11.303750 10.065854 2.001118 1.001082 9.619497 10.354258 11.118105 13.521362 11.355912 7.859092 9.213000 11.091859 12.908190 7.045505 9.291130 10.088574 7.859092 11.809673326 11.185366817 0.001153695 7.919974638 10.326416790 10.613058265 8.476844608 8.597300986 8.410502232 14.251369744 7.937749269 8.612136093 10.311724137 8.418963637 8.652163071 10.895171120 10.799583083 9.029680360 14.298672447 9.205682569 8.210564690 10.382654285 10.172288108 8.281882284 7.012338485 12.572152860 10.298027503 10.690235665 9.885281806 10.046870941 8.129260346 9.208125573 10.525653034 9.117455318 12.443922657 NA 8.759334628 9.034038769 9.582311933 9.117455318 11.631833487 8.190935797 6.943626008 8.410502232 7.789013855 9.789013855 9.732430327 10.036034008 7.001110898 7.673536638 NA 0.001153695 8.371798856 NA 9.031778383 6.393428214 11.927777925 8.166018429 10.517796233 9.689361543 4.701549057 10.862973663 13.670550046 9.818094966 10.789829652 10.304892017 9.784109524 8.504936940 4.393429930 10.116154969 10.139203938 0.001153695 6.834000715 12.916243759 10.430235504 10.157194320 7.181020035 5.045504130 13.177128571 11.530053717 11.429471499 10.918483362 9.710195139 11.543175841 10.836372242 8.389128379 9.780764971 11.214823126 9.793901571 0.001153695 1.001081616 7.959373730 7.789013855 13.232482507 8.898956841 8.480891560 NA 8.776491265 9.291130170 6.393428214 7.852860300 7.615820880 11.511875475 5.427374867 5.931848494 TCGA-AG-3609 65 0 NA 608 rectum stage iiic t3 n2 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 4 NA NA 42.51.0 3 7 2 NA 1 1 3 4 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 4 2.254233e-06 1.040415e-06 8.0703501 10.4403725 11.8746453 7.4731091 8.5320032 9.6034489 4.7726722 0.1877677 10.2017276 3.7726669 7.2211298 11.3176341 9.8950663 10.2216257 8.9291741 12.0280917 3.5449000 -0.0529810 0.7799100 0.7028200 -0.0930760 -0.0930760 -0.0594480 -0.9448400 0.7900000 -0.1207400 0.6571700 0.7561700 2.4746000 2.4746000 3.4131000 1.6626000 -0.1150000 0.6752400 1.6476000 1.3025000 2.2377000 3.6569000 3.6569000 1.3412000 -0.1650200 -0.0632340 -0.0697780 -0.6845400 -0.0426870 -1.2929000 -0.0186730 -0.0186730 -0.0062741 0.7897400 0.7799100 -0.0934460 -0.1532800 0.7020700 -0.0917280 -0.0212810 -0.0544650 -0.0594710 0.6571700 0.6806200 -0.0483870 0.0023124 -0.0873580 0.6959000 -0.1150000 -0.1101600 -0.1298300 -0.0841730 -0.0841730 1.3025000 2.2377000 -0.1168200 0.7050700 0.2240200 0.000 0.000 0.790 0.000 0.681 0.681 0.670 0.000 0.000 -0.115 -0.115 0.545 0.675 0.000 0.000 1.372 1.372 0.000 0.000 3.657 3.657 -0.117 0.705 0.761 0.761 0.000 0.000 0.000 0.000 0.790 0.790 0.000 0.000 1.811 0.777 0.000 0.000 0.000 0.000 0.249 0.000 0.000 0.790 0.000 0.681 0.681 0.670 0.000 0.000 -0.115 -0.115 0.545 0.675 0.000 0.000 1.372 1.372 0.000 0.000 3.657 3.657 -0.117 0.705 0.761 0.761 0.000 0.000 0.000 0.000 0.790 0.790 0.000 0.000 1.811 0.777 0.000 0.000 0.000 0.000 0.249 7.969067 6.630650 4.435635 14.150583 8.919026 7.500590 8.014255 3.357636 10.099099 9.738454 6.580025 2.995068 9.534221 10.180646 12.163197 9.646421 10.516382 9.042576 9.076450 8.259169 5.045688 12.996068 1.772688 1.187704 5.435635 6.164987 10.264523 10.481179 11.596037 9.877705 8.198935 10.169274 7.347579 5.742297 13.299495 13.333639 10.422525 13.221130 5.316989 11.874645 7.082525 9.611873 2.509645 15.364270 5.742297 11.593380 11.011074 9.569250 9.603449 8.609772 12.913073 8.421327 8.634790 9.162122 10.443916 2.187704 2.187704 10.901953 11.232784 12.114374 13.032217 11.611348 7.679560 8.695502 11.634744 13.192630 7.387380 8.863664 9.742296 8.765136 11.849485 11.777826 1.187704 8.070350 10.367616 10.440373 9.023757 9.311828 8.327258 14.150583 7.518624 7.888147 11.543609 8.118444 8.827952 11.296232 11.265858 8.675868 14.462813 8.772670 8.463832 10.742296 10.276495 8.651231 6.491488 12.565460 10.539751 11.987798 9.804256 10.471953 8.280464 8.908806 10.715184 8.853043 12.189903 4.357629 9.141904 9.380197 9.452150 6.562746 11.887713 9.611873 6.679560 9.322133 9.076450 9.659382 9.290995 9.091589 9.196136 8.136074 5.942594 6.377532 9.459170 NA 9.339992 7.435634 13.223022 8.780164 10.676552 9.875957 2.509645 11.234149 14.764664 10.376296 10.201728 10.392278 10.592849 8.094598 4.435635 9.924109 9.264362 NA 5.742297 13.487344 9.688031 9.925799 7.415372 4.888149 13.199284 11.055758 10.782032 11.384924 10.221626 12.309888 11.564375 8.505120 10.109548 11.681563 8.929174 NA 1.187704 9.722516 8.280464 13.806207 8.742296 7.571411 NA 8.103407 8.863664 11.529782 7.164987 8.221130 11.433854 4.275171 5.860133 TCGA-AG-3611 72 0 NA 0 rectum stage iia t3 n0 m0 25-9-2014 male 2009 31 NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 2 2 NA NA NA 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 1.283179e-06 4.855272e-07 6.530199 10.540510 12.573159 7.482105 8.889481 9.952609 4.769386 NA 10.763112 2.184439 7.749209 10.365991 10.008853 10.199728 9.957014 10.497307 0.9820400 0.9915700 -0.5226600 -0.2304400 -0.1973200 -0.1973200 -0.1973200 0.0000000 0.4910500 -0.8399400 1.3911000 1.3911000 0.7725800 0.7725800 0.7725800 -0.4628100 0.5608100 0.5133300 -0.8307200 1.8307000 0.4529200 0.4529200 0.4529200 -0.0620920 0.1004500 0.1004500 0.1502400 -0.2242600 0.3389300 0.4634800 -0.5185500 -0.5185500 -0.8588600 -0.5265600 -0.5226600 -0.2304400 -0.1993700 0.8613600 -1.2929000 0.0000000 0.0000000 -0.8399400 1.3911000 0.5843500 0.1355400 0.1355400 -0.4628100 -0.4628100 0.5608100 0.5608100 -0.9057100 -0.3643100 -0.5760500 -0.6055500 0.4529200 0.3276900 -0.3640800 0.0081045 0.000 0.000 0.537 -0.295 1.330 0.000 0.773 0.136 -0.463 0.561 0.561 -0.420 0.486 -0.364 -0.364 0.000 0.000 0.150 0.982 0.453 0.453 0.328 -0.364 -0.145 -0.145 0.463 0.463 -0.519 -0.519 -0.527 -0.527 -0.199 -0.199 0.861 0.861 -1.293 -0.197 0.483 0.483 0.000 0.000 0.000 0.537 -0.295 1.330 0.000 0.773 0.136 -0.463 0.561 0.561 -0.420 0.486 -0.364 -0.364 0.000 0.000 0.150 0.982 0.453 0.453 0.328 -0.364 -0.145 -0.145 0.463 0.463 -0.519 -0.519 -0.527 -0.527 -0.199 -0.199 0.861 0.861 -1.293 -0.197 0.483 0.483 0.000 6.847389 5.354350 2.184439 14.472897 9.764369 2.921398 6.058894 4.686926 11.719700 9.444952 5.599461 1.599461 10.905524 9.930379 11.678280 8.856850 10.581029 9.079242 7.199375 5.769388 2.184439 11.026775 NA 8.987479 8.292949 8.823464 10.4912457 9.9960668 10.7105978 9.1308436 7.2288187 8.9745015 5.6438562 4.9917803 12.3971236 11.9314986 9.7001244 12.2981667 7.1386210 12.5731594 6.0913148 7.2718878 0.5995082 13.2641316 3.4068224 11.1424939 9.8917837 10.2632870 9.9526089 7.5767421 12.1400745 9.9810051 8.4132433 13.2451205 10.3726013 2.1844390 0.5995082 10.2576735 10.4759790 10.6356357 9.9258916 11.5529311 9.4418123 8.2929492 10.2305846 13.5172071 6.5994621 9.4759790 10.2558870 7.5301995 11.9174399 11.0517033 NA 6.5301987 9.9504012 10.5405096 8.9303790 8.3742492 8.3808216 14.4728966 6.9745018 7.9213899 10.3016347 7.4196409 8.4386659 10.6134826 11.1559681 8.0794037 14.0547893 9.3442959 8.0993078 10.7991344 10.1597949 7.5652461 6.7892871 11.9570141 10.8294825 9.9100748 9.5301993 10.0340902 7.3472520 8.7843374 10.1131897 9.4035930 12.8818526 4.4574433 8.4132433 8.9346737 10.8438259 9.8894808 11.2850869 7.2718878 9.9960668 7.0588933 7.3938778 8.6162702 10.4212360 8.7634136 3.5994606 8.7027500 NA NA 7.0913148 1.5994606 9.2433182 6.0257265 10.9314986 7.8089153 10.2269959 9.9009583 NA 9.8064763 13.6499910 9.5652464 10.7631118 10.5272401 9.5242745 8.1617043 4.9213887 8.8709250 10.3845222 0.5995082 7.5183250 13.1097317 8.8202757 10.1636116 6.7633638 5.1230247 12.8682964 11.3050944 10.3188509 10.1502088 10.1997282 11.5086051 10.2736544 8.1540510 10.7591695 10.7158060 9.9570141 0.5995082 0.5995082 9.1750013 2.5994606 13.4880151 8.7693870 8.8521275 3.5994606 8.4196409 9.4759790 NA 6.7693870 7.5183250 11.2095641 4.5063544 6.3808212 TCGA-AG-3612 55 0 NA 608 rectum stage iiib t3 n1 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 1 NA NA 42.51.0 2 7 3 NA 3 1 4 4 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 7 1.803387e-06 6.589298e-07 7.195099 10.306445 11.951068 6.831135 9.187768 9.088933 2.793001 NA 10.619548 2.570609 7.615001 10.512144 9.445076 9.481040 9.720354 10.787353 0.0011093 -0.0187750 -0.0238490 0.5089800 -0.0514510 -0.0514510 1.7439000 -0.0085766 0.6180400 0.6155800 -0.0069195 -0.0069195 1.9715000 1.9715000 1.9715000 1.2283000 -0.0260540 0.1257900 0.1124900 -0.0332650 3.2725000 3.2725000 2.8474000 0.2812100 -0.0018014 -0.0018014 -0.0165410 -0.0493110 0.1470100 1.0616000 -0.8446700 -0.8177000 -0.8562900 -0.0127130 -0.8774700 0.5089800 0.5089800 1.4328000 -0.1666000 -0.0085766 -0.0125760 0.5963800 -0.0069195 -0.0069195 0.0580810 0.0580810 -0.8543200 -0.8894200 -0.0056757 -0.0343590 0.0870880 -0.8527200 -0.8426700 -0.0332650 0.8954700 0.1358300 0.8280400 0.2812100 0.000 0.000 0.616 0.616 0.000 0.000 1.972 0.000 -0.854 0.000 0.000 0.000 0.000 -1.293 -1.293 0.000 0.000 0.000 0.000 0.895 2.847 0.136 0.828 0.000 0.000 1.083 1.083 -0.813 -0.813 0.000 0.000 0.509 0.509 1.433 1.433 0.000 1.744 2.774 0.000 0.267 0.000 0.000 0.616 0.616 0.000 0.000 1.972 0.000 -0.854 0.000 0.000 0.000 0.000 -1.293 -1.293 0.000 0.000 0.000 0.000 0.895 2.847 0.136 0.828 0.000 0.000 1.083 1.083 -0.813 -0.813 0.000 0.000 0.509 0.509 1.433 1.433 0.000 1.744 2.774 0.000 0.267 7.38652386 6.13539122 2.98564615 14.80563414 9.12775166 5.27104837 8.08893237 1.98564615 9.34758837 9.34099591 6.68608447 2.79300107 9.92669227 9.55550022 11.72500341 9.22165889 11.40244224 8.60035451 8.91638199 7.50134440 4.74053365 11.63938548 -0.01435385 6.07310685 6.25243080 9.31431972 9.199964 11.410336 12.711437 8.767005 8.809012 8.977167 6.051733 6.135391 12.933282 12.418187 10.114928 12.603342 5.916381 11.951068 7.469460 9.345394 3.686086 14.458653 2.985646 13.581485 10.670393 9.102976 9.088933 8.170520 11.676516 9.016312 8.592975 10.697312 10.159322 3.307574 1.985646 8.954311 9.859089 10.813781 12.844403 11.020444 8.640281 9.158072 11.309803 12.773751 6.233572 8.846731 10.231197 7.334373 11.98494008 11.11878693 1.98564615 7.19509853 10.81457454 10.30644522 8.48947028 8.48149956 8.42858839 14.80563414 8.64028073 8.13030285 10.09024345 7.82484867 8.62950088 10.80022716 10.56118396 8.29311892 14.33651484 9.48349658 8.96863828 9.59666946 10.93911364 8.13539173 7.74719604 12.04836549 10.32438107 10.62588963 9.81219319 9.83895429 8.76674223 9.64742281 10.81853473 8.61500130 12.20262090 -1.61396164 9.00523547 9.60934332 9.63669639 8.41609743 10.82878063 9.34539416 3.57060865 9.04634072 8.72711177 9.38865667 9.83113478 8.65622999 6.50920652 8.94274673 -0.01435385 NA 8.24303256 NA 8.87742832 6.69989028 11.86943353 8.98564473 10.35742136 9.58183440 1.57060865 10.86292881 13.49244815 9.46340299 10.61954809 10.56118396 9.44302558 8.95431149 5.91638110 9.85137801 10.21734585 NA 6.92815947 12.76001999 10.43891533 10.11363904 7.03080395 4.44507777 12.93856791 11.09678037 11.40560489 11.23416532 9.48104015 11.59251254 10.64564060 8.07310738 9.22165889 11.28198739 9.72035440 4.23357366 0.98564615 7.39596849 6.78006070 13.14030462 8.97148665 7.86216186 2.57060865 8.49802982 8.84673149 7.81853489 8.06246013 8.48947028 11.44558855 4.23357366 7.86828796 TCGA-AG-3725 90 0 NA 0 rectum stage iii t3 n2 m0 25-9-2014 female 2005 NA NA rectal adenocarcinoma yes r0 5 NA NA 122.34.0 NA NA 2 3 3 1 2 2 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.703237 11.096459 12.802688 7.811614 8.947390 10.265611 3.400183 NA 10.879482 1.341303 8.425216 10.746789 9.504524 9.038319 11.150794 11.255180 0.04131700 0.04131700 -0.21726000 0.52310000 -0.09520600 -0.09520600 -0.04888300 -0.01064600 0.00138680 0.00138680 -0.00097017 -0.00097017 1.41390000 1.41390000 1.41390000 -0.54663000 1.13200000 0.04188300 0.02539000 -0.15426000 0.57445000 0.74918000 0.74918000 0.03264500 0.02342600 0.02342600 0.04131700 -0.01437000 0.34307000 0.32316000 -0.56892000 -0.56892000 -0.56892000 -0.21726000 -0.21726000 0.52310000 0.51751000 1.06230000 -0.09520600 -0.01064600 -0.01064600 0.00138680 -0.00097017 -0.00314960 0.01209700 -0.00477020 -0.54663000 -0.54663000 1.13200000 -0.55296000 -0.54875000 -1.15160000 -1.15160000 -0.15426000 0.57445000 -0.47733000 -0.54814000 0.03264500 0.000 0.000 0.000 0.000 0.000 0.000 1.414 0.000 -0.547 1.132 0.579 -0.549 0.000 -0.469 -1.151 -0.154 -0.154 0.000 0.000 0.574 0.749 -0.477 -0.548 0.000 0.000 0.343 0.343 -0.569 -0.569 -0.217 -0.217 0.523 0.523 1.062 1.062 0.000 0.000 0.892 0.892 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.414 0.000 -0.547 1.132 0.579 -0.549 0.000 -0.469 -1.151 -0.154 -0.154 0.000 0.000 0.574 0.749 -0.477 -0.548 0.000 0.000 0.343 0.343 -0.569 -0.569 -0.217 -0.217 0.523 0.523 1.062 1.062 0.000 0.000 0.892 0.892 0.000 5.5507468 5.4842509 0.7563402 15.4127554 10.2744923 3.7105254 9.9929431 7.6359140 11.0686467 8.1951227 5.3412920 4.1138838 10.0748737 10.2162748 12.5945500 10.0855666 11.6809579 9.2147375 8.8237653 4.7563295 3.2157562 11.9530867 4.2798947 8.7134329 6.8116136 8.1614725 9.693705 10.243166 11.488922 9.658706 7.389326 9.980333 6.843794 4.248186 12.433390 12.976180 8.949856 12.846774 6.657198 12.802688 3.511215 7.326187 1.563695 13.918565 3.965784 11.709800 10.004851 10.078822 10.265611 7.100627 12.410072 8.691496 8.947390 12.976634 9.885614 -1.243660 -1.243660 9.410072 10.185214 11.697195 12.731642 11.055539 8.248184 8.855679 11.754216 13.538100 7.279893 9.551559 10.686699 7.970650 11.9688273 11.0368118 -0.2436598 8.7032371 11.4496001 11.0964592 9.1867835 8.9899505 8.8674666 15.4127554 8.3728799 8.7966208 10.8827127 8.7061575 9.1357093 10.4167726 10.7061576 8.6028399 14.5409913 9.0692140 9.6111993 9.9268820 10.3147516 7.3562442 6.1050599 11.1977190 10.5733145 10.9306325 10.3417630 9.7386115 8.3283298 9.5120530 11.2211319 10.2526854 12.5751587 NA 8.9124139 8.1593431 10.4675676 7.9730768 12.4134260 7.3261868 6.0137191 8.8869016 7.0509522 9.7703514 10.4082795 8.3599573 7.2641254 9.1270183 1.0782682 NA 6.9162019 NA 9.1614723 3.6632194 11.0234102 8.9839470 10.1888728 9.7407493 0.3413027 10.1657218 14.0065923 9.4994824 10.8794823 10.9199806 10.1421934 8.8752720 3.0042497 10.6855894 11.6938335 -1.2436598 6.5112182 12.3863705 10.4015390 10.0894862 7.2116586 6.4842509 13.1010429 10.8872232 11.3094802 10.6804011 9.0383187 11.4831877 10.1394952 8.3051529 9.8965216 10.9452288 11.1507936 0.3413027 -1.2436598 7.6537229 4.8856134 13.5830284 9.8291335 9.2531847 -0.2436598 8.9743856 9.5515589 4.7336092 8.4808447 5.7786975 12.1609403 3.9262557 4.8856134 TCGA-AG-3726 63 0 NA 243 rectum stage i t2 n0 m0 25-9-2014 female 2006 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 1 1 1 NA NA NA 4 4 5 3 NA NA 7 0 0 0 4 0 0 0 3 0 0 0 0 4 4 7 0 0 0 0 4 0 0 0 0 0 0 4 4 4.02294e-06 8.670129e-07 6.1639294 12.3895920 13.3706643 6.7723515 9.7350300 7.4999790 2.2331825 0.2331518 8.4180681 3.9336293 5.9611139 11.8162756 8.4031177 9.1583320 10.0276087 11.9551465 0.00374650 0.01978300 -0.03986500 -0.00207840 -0.74629000 -0.74629000 0.64943000 0.01181800 0.01098200 0.01098200 0.67641000 0.67641000 -0.01436600 -0.01436600 -0.01436600 0.02560500 0.46451000 0.03284500 0.03284500 0.00695390 0.67602000 1.27360000 1.30790000 -0.05711600 0.02806000 0.02806000 0.00374650 0.00468520 -0.00096052 -0.02767100 0.00138680 -0.03217700 -0.02548300 -0.01314800 -0.03986500 0.00805670 -0.02000100 -0.00152430 -0.74629000 0.01181800 0.01181800 0.00402430 0.67641000 0.00013863 0.01042400 0.00763920 0.02932500 0.02560500 -0.71995000 -0.73208000 -0.70702000 -0.72941000 -0.74727000 0.00695390 0.71396000 -0.07827800 0.03891300 -0.05711600 0.000 0.000 0.000 0.000 0.676 0.000 0.000 0.000 0.000 0.539 -0.174 -0.707 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 1.260 0.000 0.000 0.000 0.000 0.000 0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.631 0.653 0.000 0.000 0.000 0.000 0.000 0.000 0.676 0.000 0.000 0.000 0.000 0.539 -0.174 -0.707 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 1.260 0.000 0.000 0.000 0.000 0.000 0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.631 0.653 0.000 0.000 5.277587 4.818155 NA 15.853439 11.503488 6.590744 7.855245 5.442645 8.046974 8.059741 4.481118 1.818155 9.776225 8.978027 12.691087 7.413102 10.565229 9.853413 9.137075 2.233182 4.481118 13.123457 1.233213 6.642583 3.040542 6.277587 9.0079798 10.6719847 12.3233053 10.0660829 5.6594565 9.5415319 3.6926281 4.5551229 13.2370621 11.9444296 10.4941124 11.4775567 6.1513413 13.3706643 6.4426466 9.4279497 0.2331518 15.2911423 5.1400833 13.9936009 9.6255103 9.2884753 7.4999790 7.6594579 10.9645118 7.5995149 9.9231908 10.6874921 11.5329732 3.0405418 NA 8.0405478 9.9628136 10.4751760 13.3594133 9.7547933 9.3247076 10.2090408 10.1126689 11.8998607 4.7567565 6.9336328 8.7645744 5.4426450 13.3605424 12.6990143 NA 6.1639294 9.9813858 12.3895920 8.2161866 8.1340597 5.9056181 15.8534390 8.4905806 8.7916135 12.3226433 5.8479017 7.9947443 12.5722077 9.9679025 7.4326688 14.8947483 7.6761362 8.7409876 11.3259500 8.2666160 8.1035574 4.7567565 12.1753408 8.7567548 11.5940400 11.4043696 11.5545573 7.3521335 7.4131015 8.7210329 7.8181552 13.6469080 3.0405418 9.7429679 10.6892494 10.1112438 8.6552577 13.7219117 9.4279497 2.8181552 9.4279497 7.4523615 11.7175123 7.5278140 8.9365773 7.1400833 5.8479017 NA NA 9.2884753 NA 9.7762246 7.0405473 13.2294898 7.5369737 9.2830413 7.6761362 2.5551290 11.7873020 12.0829889 10.7320421 8.4180681 9.0786829 10.4834912 8.1158359 2.2331825 7.3829395 12.2123858 NA 5.4031177 13.9963014 7.8111505 9.0210955 7.8479030 3.6926281 10.8779504 10.4999794 9.8460614 12.4043696 9.1583320 13.3317185 12.0915625 9.1580055 10.0360647 13.0788789 10.0276087 1.2332132 NA 8.1115504 6.2104726 12.4389861 8.5369737 6.0660827 NA 7.6011758 6.9336328 0.2331518 5.6255101 5.8181552 8.6552577 3.8181552 6.0145517 TCGA-AG-3727 78 0 NA 30 rectum stage iii t3 n1 m0 25-9-2014 female 2006 NA NA rectal adenocarcinoma yes r0 2 NA NA 42.51.0 1 3 1 NA 3 1 4 4 5 3 NA NA 7 0 0 4 4 0 0 0 1 0 0 0 0 0 0 7 0 0 0 4 4 0 0 0 0 0 0 0 0 2.150192e-06 5.202077e-07 6.474494 11.498807 13.328104 6.831429 10.241517 6.870423 1.641592 NA 8.125420 3.963530 4.226562 11.701624 7.801475 9.351204 9.999156 11.459387 0.0169410 0.0116350 -0.0323900 0.0154240 -0.8289800 -0.0188080 1.2258000 0.0164250 0.9766100 0.0264700 0.0277350 0.0277350 0.6912400 0.6912400 2.0558000 0.0418390 0.0363310 0.0494960 0.0494960 0.0151570 0.7826700 1.7009000 0.7761200 -0.0632080 -0.7950500 0.0390100 0.0169410 0.0012378 0.0046757 -0.0095736 -0.0227860 -0.0227860 -0.0497370 -0.0102200 -0.0387560 0.0536190 -0.0122400 -0.0335610 -0.8321200 0.0000000 0.0238030 -0.8180500 0.0277350 -0.0062224 -0.8154300 -0.8154300 -0.7882700 0.0418390 0.0730700 0.0182110 -0.8076900 -0.8030000 -0.8285900 0.0151570 0.0626070 0.0031478 0.0082917 -0.0773290 0.000 0.000 0.000 0.000 0.000 0.000 0.691 -0.815 0.000 0.000 0.000 -0.771 0.000 0.000 -0.798 0.000 0.000 0.000 0.000 0.776 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.691 -0.815 0.000 0.000 0.000 -0.771 0.000 0.000 -0.798 0.000 0.000 0.000 0.000 0.776 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.810 0.000 0.000 0.000 0.000 5.1651643 6.5723410 NA 15.6416883 10.1961926 6.2563144 8.1254197 9.1092093 7.8607723 8.7022998 4.8115275 0.6416385 9.9270059 8.5242467 13.1904256 7.7290667 9.9013471 8.9316225 8.6639715 8.4097880 3.9635296 12.7853058 0.6416385 7.6639715 3.6416038 6.2265663 9.215251 11.361848 12.969437 10.409788 6.750128 9.704999 4.811528 5.685999 13.611170 11.944243 10.250782 11.575294 5.881156 13.328104 6.548494 9.569382 1.641592 15.184333 2.963530 13.411028 11.347236 8.523391 6.870423 8.248934 10.875223 7.999156 9.331602 12.743251 11.524247 3.963530 1.641592 8.165166 10.029621 10.414743 13.105128 9.752739 10.921470 10.098985 9.744892 12.075189 5.165164 7.355850 8.455385 4.963530 12.3763134 12.6753709 NA 6.4744945 9.1334569 11.4988072 8.3350906 7.9725203 4.8115275 15.6416883 8.5604670 7.9177283 12.6608469 4.7290687 8.0594564 12.2953445 10.3729227 7.9036987 14.6453851 6.7290660 8.3350906 12.1025715 8.6859979 8.6245974 5.3420427 12.2340608 8.9408119 12.9264278 11.4665625 11.8686179 7.6296065 6.7076932 8.3627031 6.9635319 13.4728001 3.2265702 9.7708867 10.6707253 8.8363606 6.7290660 12.8074529 9.5693817 7.5957998 10.0928149 7.8215125 11.6968862 6.7290660 8.5958001 9.3033819 6.3140294 NA 0.6416385 7.8800083 NA 10.8631909 7.0509946 13.2152509 7.2114591 8.5958001 7.9177283 NA 11.5173531 12.4229635 10.6160183 8.1254197 8.9362245 10.6500324 7.3830709 2.6415923 7.2114591 11.6490726 NA 6.1334567 14.4164937 7.5794193 8.8656055 7.2415170 3.6416038 10.3087152 9.9385200 9.0339213 12.3442093 9.3512045 13.5219525 12.4792317 9.1493983 9.1617116 13.5828348 9.9991557 1.6415923 0.6416385 7.5581995 5.3420427 12.3872781 7.9635319 5.3420427 NA 7.3924780 7.3558497 7.6968862 4.5484921 6.8895307 8.6584122 4.5484921 4.2265625 TCGA-AG-3728 73 0 NA 912 rectum stage iiib t3 n1 m0 25-9-2014 male 2006 NA NA rectal adenocarcinoma yes r0 3 NA NA 42.51.0 2 5 2 NA NA NA 4 4 5 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.167290 11.394458 13.108463 6.968744 8.207931 7.038006 6.125469 1.038015 8.652716 5.845362 6.561569 11.805363 9.455859 8.833267 10.015286 12.716166 0.0144700 0.0144700 -0.3835800 0.5829900 -0.4382100 -0.4382100 0.0779760 -0.3449200 0.0118180 0.0118180 -0.3402100 -0.3402100 1.3487000 1.3487000 1.0369000 -0.3787600 0.0430150 -0.0124380 -0.0124380 0.0000000 1.1912000 1.1912000 1.1681000 -0.0343590 -0.3116700 -0.3116700 -0.3116700 0.0132130 -0.0446860 -0.0446860 -0.3544200 -0.5845100 -0.3328300 -0.3835800 -0.3835800 0.5829900 0.5677400 0.3666700 -0.4382100 -0.3449200 -0.3449200 -0.0061252 -0.3402100 -0.3402100 0.0731850 0.0731850 -0.3787600 -0.3787600 0.0430150 0.0430150 -0.0124380 -1.0733000 -0.7893300 0.0000000 1.1912000 -0.3473300 -0.3551000 -0.0343590 0.236 -0.109 0.000 0.000 -0.340 -0.340 0.750 0.000 -0.379 0.000 0.000 0.000 0.000 -0.772 -0.772 0.000 0.000 -0.312 0.000 1.191 1.191 -0.357 -0.355 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 -0.384 0.583 0.583 0.428 0.428 -0.438 0.000 0.000 0.000 0.000 0.236 -0.109 0.000 0.000 -0.340 -0.340 0.750 0.000 -0.379 0.000 0.000 0.000 0.000 -0.772 -0.772 0.000 0.000 -0.312 0.000 1.191 1.191 -0.357 -0.355 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 -0.384 0.583 0.583 0.428 0.428 -0.438 0.000 0.000 0.000 0.000 7.430324 6.430324 4.038006 14.509137 10.573282 7.227831 5.430322 7.395558 8.944897 10.408694 7.125469 4.359936 10.021000 8.607862 12.727131 7.724507 9.965784 7.464271 9.835668 10.026691 6.167290 12.996197 3.038015 6.497438 3.622965 6.285933 9.377856 11.134722 12.751822 9.464271 4.944896 9.611654 4.207932 8.146531 13.624612 11.637919 9.762520 11.640705 4.845360 13.108463 7.779473 10.741910 2.038015 15.462501 4.207932 12.743207 10.156947 8.712622 7.038006 9.799558 10.962819 7.980521 8.285934 12.696664 10.953886 5.359936 4.359936 9.026691 9.905285 10.838906 12.145877 10.177558 9.752252 9.328025 10.237605 12.823050 5.285935 8.177558 9.809496 6.845361 13.256872 12.365559 1.038015 6.167290 9.825909 11.394458 7.447397 7.980521 6.845361 14.509137 8.765927 8.314131 11.683665 6.529860 7.247460 12.101401 10.271626 6.561569 15.056815 7.819366 8.799558 10.779473 9.177558 7.359934 9.938873 11.398853 9.382302 11.747090 10.928271 11.397756 7.207931 7.577165 9.364436 7.845361 13.303237 NA 9.974644 10.530220 9.009550 8.779473 11.530861 10.741910 5.738446 10.237679 9.413046 11.479913 8.819366 8.902192 6.529860 6.845361 NA NA 8.674631 1.038015 9.217915 7.622969 12.748813 7.845361 10.636059 7.187754 1.038015 11.329177 12.363312 10.822641 8.652716 9.197878 11.323409 8.136039 6.652716 8.125469 11.348051 1.038015 9.038006 13.963932 8.156947 8.738446 6.870896 4.497440 11.483021 10.093289 9.861374 12.239518 8.833267 12.731058 11.805363 8.738446 8.756026 12.185211 10.015286 6.167290 1.038015 8.744744 6.247460 13.052724 7.968743 7.497438 1.038015 7.162748 8.177558 NA 6.355962 8.187753 9.076925 4.497440 6.681862 TCGA-AG-3731 65 0 NA 31 rectum stage iv t3 n1 m1 25-9-2014 male 2004 NA NA rectal adenocarcinoma yes r2 3 NA NA 122.34.0 NA NA 1 3 1 1 1 2 2 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8075323 11.5733204 11.7781535 8.6855779 9.3114800 11.4108421 1.1977396 0.1977396 11.1750178 2.1977396 8.4281587 10.6386070 10.1066307 10.0522011 9.7173741 10.7320407 -0.1637400 -0.1637400 -0.1685700 -0.0010077 0.0261950 0.0261950 1.5910000 -0.3666100 0.0176460 0.0172260 1.4747000 1.5127000 0.0032922 0.0032922 0.0041256 0.0543370 0.5235800 0.0359090 0.0513490 0.0935810 0.8174200 0.8174200 0.8174200 0.0000000 -0.1534000 -0.1683100 -0.1637400 0.0401470 -0.1574200 -0.1315100 -0.2068800 -0.0566130 0.3992300 -0.1813400 -0.1685700 -0.0086391 -0.0255200 0.0231070 0.0309760 0.0099685 0.4648000 0.0172260 -0.3839500 0.0646150 0.0804170 -0.4291100 -0.0313960 0.0543370 -0.0352130 -0.0115110 -0.4177600 -0.2897900 0.5065000 0.0935810 0.5625400 0.0204020 -0.6859000 0.0000000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 -0.265 -0.265 0.000 0.000 -0.164 -0.164 0.563 0.817 0.000 -0.148 0.000 0.000 -0.132 -0.132 -0.150 0.000 -0.169 -0.169 0.000 0.000 0.000 0.000 0.526 0.526 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 -0.265 -0.265 0.000 0.000 -0.164 -0.164 0.563 0.817 0.000 -0.148 0.000 0.000 -0.132 -0.132 -0.150 0.000 -0.169 -0.169 0.000 0.000 0.000 0.000 0.526 0.526 -0.177 -0.177 0.000 8.328737 6.167364 6.120570 14.207420 9.440912 5.120572 7.163522 5.543511 10.375157 9.679537 8.178829 4.916558 8.311480 11.033525 11.629758 9.614887 10.715407 9.581442 8.643442 8.495419 5.657168 12.107256 4.495420 6.394135 7.364319 7.108630 9.917697 11.004824 11.831187 9.366828 8.719992 11.027196 7.790195 6.870164 12.035497 13.223397 10.060375 13.308765 6.952625 11.778153 6.407191 10.008845 3.742060 14.314975 6.327021 11.848790 10.534988 11.517786 11.410842 9.212688 12.909620 8.708172 8.496946 10.589697 11.493889 1.612777 1.197740 10.145618 9.981827 12.180375 11.326591 10.836475 7.486220 9.135357 12.572596 12.835495 7.357609 10.275444 10.863962 7.635143 11.260683 10.775167 1.934705 8.807532 11.670598 11.573320 9.495418 9.444874 9.766960 14.207420 8.456697 7.473862 10.897599 10.840692 8.885405 10.969227 11.140985 10.012918 14.352503 8.418519 9.655803 9.889481 9.723911 7.881902 8.612775 11.963300 10.176448 9.835570 10.349600 10.221954 8.098866 10.177877 11.437137 9.888318 12.516043 NA 9.355927 8.846395 10.881610 9.873695 13.622167 10.008845 6.787701 9.007238 10.054682 9.713438 9.902218 9.195858 9.628887 9.417713 1.782702 3.256633 9.642063 NA 11.334942 6.360968 11.161838 8.883071 10.475413 10.132903 1.934705 10.614184 13.721749 10.813061 11.175018 10.147565 9.926225 9.260234 4.700240 11.428559 9.973002 2.934705 8.655803 12.550885 10.554190 10.101118 7.601460 6.513642 12.778703 10.485450 10.981555 10.860109 10.052201 12.534151 10.660922 8.829521 11.727331 11.417713 9.717374 4.420132 1.612777 7.359525 5.555289 14.026833 9.979644 9.399045 1.934705 9.354057 10.275444 4.367665 9.652380 8.090534 12.239169 5.996479 7.950397 TCGA-AG-3732 78 0 NA 1003 rectum stage i t2 n0 m0 25-9-2014 female 2005 NA NA rectal adenocarcinoma yes r0 0 NA NA 102.35.0 NA NA 4 2 NA NA 2 2 3 2 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4003180 11.9931663 13.0493547 8.1095199 9.8307649 10.2686123 0.8592540 -0.1408255 11.0344590 1.6665748 8.4647009 10.5956233 10.3283544 8.3779137 10.7175909 8.6984251 0.01788000 0.01558100 -0.60381000 0.00054873 -0.06263500 0.63170000 0.74998000 0.01125500 -0.33826000 -0.33826000 0.01795700 0.01795700 0.08405800 0.08405800 -0.55447000 -0.00471370 -0.00139170 -0.06612300 -0.02945400 -0.11247000 -0.00485200 -0.00485200 -0.00485200 -0.72199000 -0.00982430 -0.00982430 0.01788000 0.02426200 -0.62494000 -0.08798200 -0.62532000 -0.56912000 -0.56550000 -0.62582000 -0.60381000 0.00054873 0.00054873 0.02034000 -0.64971000 0.01125500 0.01125500 -0.33826000 0.01795700 -0.59819000 0.02538400 0.01223100 -0.64359000 -0.00471370 -0.03980700 -0.63954000 -0.67967000 -0.60926000 -0.60926000 -0.11247000 -0.00485200 0.47614000 -0.06531300 -0.72199000 0.000 0.000 -0.338 -0.338 0.000 0.000 0.000 0.000 0.000 0.000 -0.638 -0.614 0.000 -0.636 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.000 0.000 0.000 0.000 0.000 -0.625 -0.544 0.000 -0.604 0.000 0.000 0.000 0.000 -0.573 0.632 0.000 0.000 -0.115 0.000 0.000 -0.338 -0.338 0.000 0.000 0.000 0.000 0.000 0.000 -0.638 -0.614 0.000 -0.636 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.000 0.000 0.000 0.000 0.000 -0.625 -0.544 0.000 -0.604 0.000 0.000 0.000 0.000 -0.573 0.632 0.000 0.000 -0.115 6.260101 3.318649 5.302165 14.600528 11.033523 4.741866 6.277073 5.692112 11.411890 9.163002 7.881589 5.545721 9.031649 11.392551 13.271923 9.656072 11.731896 10.599424 9.175503 NA 4.251537 10.082620 1.444190 5.199072 7.130685 7.181149 10.270732 10.791436 11.021927 9.609928 8.949334 11.569167 7.949334 8.501273 11.794202 13.276942 10.425275 13.073920 7.063792 13.049355 5.587143 8.936037 5.068675 13.309853 5.068675 11.318653 11.184527 10.842215 10.268612 7.347061 12.773139 10.159002 8.801736 12.834890 11.147511 1.181166 3.444190 10.537821 10.347564 12.207396 11.326063 10.181149 8.882976 8.923964 11.085935 13.155492 8.039130 10.643447 11.013090 7.425275 11.765172 10.847196 2.946693 8.400318 11.673604 11.993166 10.366520 9.375906 10.034771 14.600528 6.510274 9.896082 10.480815 9.413810 9.312492 11.150968 11.287320 8.528089 13.745299 8.588842 9.764608 9.917213 10.065015 6.729585 10.131268 11.172955 11.030398 10.120729 10.303719 10.408525 7.235042 8.896768 11.523891 10.741482 12.683683 NA 9.244005 8.102395 10.946021 10.368007 12.671700 8.936037 11.038508 7.576898 8.432868 10.013407 10.695666 9.470643 2.666575 9.894708 5.545721 NA 8.788480 0.859254 10.063793 6.566581 10.755175 7.813418 10.754797 10.604475 0.859254 10.506680 13.669994 10.292285 11.034459 10.882976 10.061345 8.451678 6.495845 10.784776 10.106573 1.859214 9.602373 12.940538 9.185651 11.113659 8.142402 7.053978 13.002206 10.364040 10.420987 10.800269 8.377914 11.618902 10.164143 9.032898 9.873939 11.093440 10.717591 7.003880 3.444190 8.133576 4.107152 13.173521 10.451211 10.118965 1.666575 9.080228 10.643447 1.859214 8.165283 5.836502 12.053517 5.029148 8.343037 TCGA-AG-3742 85 0 NA 30 rectum stage i t1 n0 m0 25-9-2014 female 2004 NA NA rectal adenocarcinoma yes r0 0 NA NA 102.35.0 NA NA 3 3 1 1 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.56569694 11.13320246 12.54604286 7.89947475 9.39204904 10.28996480 3.35810083 -0.03416032 10.65839975 1.28770869 8.67486808 10.44657447 9.94592383 9.44125418 10.10277543 10.89689113 0.02090300 0.02090300 -0.00232690 0.00069327 -0.74612000 -0.74612000 1.67130000 0.00000000 -0.00152430 -0.00152430 -0.01436400 0.00277450 1.45700000 0.69230000 0.69230000 -0.73222000 0.02468900 0.54400000 -0.06155500 -0.01326400 1.23690000 1.92180000 2.02870000 -0.02985700 0.02090300 0.02090300 0.02090300 0.00458000 -0.02419600 -0.01422800 -0.01216200 -0.01216200 -0.68979000 0.00194180 0.00194180 0.00069327 -0.00539920 0.67030000 -0.74612000 0.01046500 0.00000000 -0.00484610 0.00277450 -0.00948080 -0.71107000 -0.73510000 -0.71435000 -0.72782000 0.02468900 0.02468900 -0.74002000 -0.71809000 -0.69351000 -0.01326400 -0.74185000 0.02595200 0.00889200 -0.02985700 0.000 0.000 0.000 0.000 0.000 0.000 0.692 -0.735 -0.728 0.000 0.000 -0.678 0.000 -0.718 -0.718 0.000 0.000 0.000 0.000 0.489 1.230 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.670 -0.740 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 -0.735 -0.728 0.000 0.000 -0.678 0.000 -0.718 -0.718 0.000 0.000 0.000 0.000 0.489 1.230 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.670 -0.740 0.000 0.000 0.000 0.000 6.700494 4.580495 3.053250 15.577587 9.600595 1.965766 9.140710 6.481485 10.223172 7.620420 4.773142 3.053250 9.822210 10.753687 12.205830 10.016313 12.195655 9.917798 8.631120 8.400412 3.489350 12.232278 1.550753 5.232573 6.785964 6.977012 9.66882260 11.09022876 12.47147180 9.61234291 7.62041999 10.29333691 7.68688356 3.21370499 12.42431906 13.18199964 9.20179851 13.05688905 7.34477258 12.54604286 5.58049526 8.93012524 -0.03416032 12.56720690 3.55075294 11.22582169 10.01563276 10.27241564 10.28996480 8.22552752 12.38099789 8.79709147 9.39204904 8.78436656 10.85148062 0.55070370 0.96576582 9.51845331 9.99023135 11.87904773 13.37974270 10.92469947 8.83320193 9.92723396 12.11537264 13.17256974 7.10021028 9.22081288 10.71690989 8.43542608 11.10948639 11.09860530 NA 8.56569694 11.91998060 11.13320246 9.18010334 9.19219638 9.32772800 15.57758661 8.55824123 7.86363001 9.27412326 8.36452779 9.45963981 10.49277252 10.44050419 8.60280760 13.91342122 9.12943398 9.74796351 9.14444922 9.88464752 7.59149317 0.55070370 11.64019725 10.75938756 9.05457257 9.88166370 9.70472104 9.32311625 10.08472536 11.43160572 9.38363691 12.23868812 NA 9.03590511 8.31672366 10.01290816 5.13570723 13.49106039 8.93012524 3.87267119 8.96578428 8.89947505 9.39832621 9.63997662 8.01017840 6.56569770 9.09635490 0.55070370 NA 6.87267488 0.55070370 8.73727371 4.55074679 11.22376137 8.63466913 9.77715897 10.04793339 1.28770869 10.53183837 13.89938274 9.30452062 10.65839975 10.94699478 9.55168577 9.01154400 3.28770869 10.27298511 10.57554936 NA 3.55075294 12.31934466 9.50978272 10.34678640 7.67314368 6.32333584 13.38508615 10.91816154 10.98537505 10.28714870 9.44125418 12.12202539 10.22493900 8.86211659 9.78036670 11.21549035 10.10277543 -0.03416032 NA 7.96589681 5.48934704 13.97259247 10.23432623 8.65927133 NA 9.09175298 9.22081288 7.10533551 8.18010359 7.74714433 12.24408853 5.13570723 5.37517500 TCGA-AG-3878 64 0 NA 30 rectum stage i t2 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 6 1 NA 1 1 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 4 0 0 0 0 0 7 7 0 0 0 4 0 0 0 4 0 0 0 0 2.254233e-06 5.202077e-07 6.667255 11.431462 13.113924 6.593254 8.593254 8.165505 1.930283 NA 8.264189 5.593255 6.178217 11.526478 9.479753 10.170667 10.486156 11.913757 -0.00318590 -0.00318590 0.00013863 0.00624810 -0.00595220 -0.00595220 -0.00595220 -0.00318590 -0.00415460 -0.00415460 -0.00235530 -0.00235530 -0.00055444 -0.00055444 -0.00055444 -0.00705760 -0.00981850 -0.00747200 -0.00747200 0.26642000 0.31001000 0.31001000 0.31001000 0.04584800 -0.00318590 -0.00318590 -0.00318590 -0.00277600 0.00235810 0.00235810 0.00000000 0.00000000 0.00000000 0.00013863 0.00013863 0.00624810 -0.00637770 0.32677000 -0.00595220 -0.00318590 -0.00318590 -0.00415460 -0.00235530 -0.00235530 0.01768400 0.00041910 -0.00705760 -0.00705760 -0.00981850 -0.00981850 -0.00747200 -0.00498440 -0.00561180 0.26642000 0.31001000 -0.01119800 -0.00636680 0.04584800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.266 0.000 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.327 0.327 0.000 0.000 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.266 0.000 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.327 0.327 0.000 0.000 0.321 0.321 0.000 7.411415 7.165505 2.667256 15.137212 11.039684 5.252215 8.258216 8.733343 9.224909 10.395175 6.554779 2.930283 10.204861 9.045766 12.311110 7.190816 9.255219 8.868888 8.996378 9.961875 5.702879 12.993684 2.667256 7.535151 7.086793 5.771590 9.500144 10.602714 12.335075 9.472031 6.045766 9.552341 5.045766 6.930289 12.602419 12.158306 10.305328 11.854606 6.444200 13.113924 7.658209 10.794475 2.345340 14.945878 5.152682 13.657642 10.820046 8.985571 8.165505 9.814968 11.517128 8.126686 8.888358 14.106877 11.461670 5.203307 4.432786 8.644534 9.737644 10.745138 12.799111 10.017752 8.943230 8.771591 9.537594 12.125456 4.432786 8.120113 8.963712 6.100214 12.8481580 12.7877514 1.3453396 6.6672549 10.4060221 11.4314624 8.2878407 8.2641892 6.7028778 15.1372125 8.5644948 6.8999152 12.2852726 6.9302891 7.9600361 12.2424153 10.4950733 7.4874333 14.5728669 7.6399470 9.0353242 11.4982447 8.4274750 7.6940542 9.0935190 11.9554282 9.6027141 11.6272562 11.7083658 11.3375565 6.5039863 7.4221422 9.2492080 8.0106618 13.8058486 NA 10.0265645 10.6541203 9.9526565 9.0071044 12.9113802 10.7944748 7.3226060 10.8037328 9.5351507 11.4167886 8.0177516 10.5669133 6.2522169 7.1908163 NA NA 8.8570787 0.3452828 10.3593467 7.6027137 13.1613098 8.1526813 9.8251065 8.1591074 NA 11.6851762 12.1409600 10.8037328 8.2641892 9.5523406 10.8210596 8.3226060 4.0457662 8.5979914 12.3112222 NA 7.8767079 14.3529667 9.0766451 9.3368479 7.1655050 5.2522151 11.2333083 10.1829541 9.7376437 12.3656117 10.1706666 13.0659980 12.0039840 9.4720306 10.1876765 13.0028679 10.4861559 4.5932522 NA 8.0179637 4.1526783 13.4066974 8.2033074 6.7882694 0.3452828 7.8007356 8.1201134 NA 6.6851763 7.2522169 9.0901601 4.2522188 6.1526803 TCGA-AG-3881 83 0 NA 0 rectum stage iia t3 n0 m0 25-9-2014 female 2008 NA NA NA yes NA 0 NA NA 42.51.0 2 2 4 NA 1 2 4 3 5 3 NA NA 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 2.462317e-06 8.670129e-07 5.681576 10.646243 12.162008 6.427819 9.488931 8.814842 1.727398 NA 7.669894 4.634268 6.634269 11.120770 8.553928 9.389300 9.262655 9.861806 0.4675900 0.4675900 -0.3828000 0.0091705 -0.3547600 0.4780400 0.4568300 1.8055000 -0.3546400 0.0174040 3.6569000 0.8298000 0.0297360 0.0297360 0.0297360 -0.3527000 -0.3517900 0.0867840 0.0961500 -0.3459500 0.0939110 0.0939110 0.0922340 -0.5284900 -0.3315600 -0.3315600 -0.8497900 -0.3398700 -0.3560100 0.0927500 -0.3657800 -0.3657800 -0.3657800 -0.3970800 -0.3828000 0.0448570 0.4158000 0.0650830 -0.3937700 0.0649400 -0.3570400 -0.3648800 0.4765000 0.0672320 0.0875340 -0.3584000 -0.3559000 -0.8365600 -0.3326000 -0.3517900 -0.3587400 -0.8558800 -0.8558800 -0.3459500 0.0939110 -0.3813400 0.0736900 -0.5284900 0.000 0.000 -0.355 -0.355 0.830 0.830 0.000 -0.358 -0.356 -0.352 -0.352 -0.359 0.000 0.000 -0.856 -0.346 -0.346 -0.366 0.102 0.000 0.000 -0.404 0.000 -0.343 -0.343 -0.356 0.000 -0.366 -0.366 0.000 -0.383 0.000 0.000 0.000 0.000 0.076 0.457 1.774 1.774 0.206 0.000 0.000 -0.355 -0.355 0.830 0.830 0.000 -0.358 -0.356 -0.352 -0.352 -0.359 0.000 0.000 -0.856 -0.346 -0.346 -0.366 0.102 0.000 0.000 -0.404 0.000 -0.343 -0.343 -0.356 0.000 -0.366 -0.366 0.000 -0.383 0.000 0.000 0.000 0.000 0.076 0.457 1.774 1.774 0.206 7.9270520 7.8254117 5.4278207 13.8144230 10.1703231 6.4552993 7.5977442 5.2509426 8.7217329 10.0915142 6.7046590 0.7273542 10.7032275 8.4822671 11.9941661 7.3855907 9.7880755 8.3855911 8.3420893 10.9110149 4.1868095 12.1698047 2.3123457 7.2351746 0.7273542 6.7273800 9.672823 10.134647 11.520983 8.998843 6.534734 8.634270 4.534734 6.342089 13.065001 12.144705 9.912255 12.358102 5.921939 12.162008 9.746970 11.000009 2.312346 14.688377 4.049308 12.301027 9.634270 8.410163 8.814842 9.451893 11.885358 8.704659 9.323569 14.650336 10.861806 5.727379 4.312338 8.664017 10.502167 10.861806 11.599285 10.784017 11.001618 8.646243 9.031160 13.048744 6.119696 7.771773 8.420866 5.814843 13.1473397 11.7690387 2.3123457 5.6815758 9.4955639 10.6462428 7.6462426 8.6161228 6.3998051 13.8144230 6.4278190 6.4278190 12.5274705 5.9753069 7.9657843 11.4467684 11.3802245 7.1316697 14.5044293 7.5217951 8.0761074 10.9416987 9.9343938 6.6342694 6.9172038 12.6402689 9.8592364 10.2172276 10.9368329 11.1919253 8.5786912 7.5347348 9.0081504 6.7046590 13.1328402 3.3123457 9.1282589 9.6706562 9.4068595 6.7273800 11.6610702 11.0000093 8.2031130 12.0237222 8.5977442 10.2470158 8.0493078 9.1310307 6.1868115 6.8771270 NA NA 8.7273797 NA 8.9122549 8.6989231 13.0116253 8.0402623 9.8947978 7.6581172 0.7273542 10.7245590 12.9976749 11.6395204 7.6698942 9.1067579 10.1367705 7.9847676 4.6342680 7.9657843 10.4780865 3.3123457 7.1868115 13.6136477 9.3198365 8.5915657 6.5087392 4.0493084 11.6206811 10.8267274 10.0716754 12.0953403 9.3893001 11.8456718 11.3095215 8.7988418 8.9061441 12.0810778 9.2626549 2.7273759 NA 8.4010066 6.5853607 12.8815648 6.8973046 6.3712365 NA 7.0502089 7.7717734 NA 7.4688464 7.2665383 9.1785907 3.5347340 7.3420898 TCGA-AG-3882 66 0 NA 608 rectum stage i t2 n0 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 7 3 NA 2 5 4 4 5 3 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 4 4 6 0 0 0 0 0 0 0 0 0 0 0 4 4 1.664665e-06 3.121246e-07 5.262426 11.418577 13.593580 6.742420 8.636551 7.742420 5.658357 NA 8.262427 4.714938 6.101963 11.715806 8.686925 9.929632 10.091315 12.403055 0.4385100 0.3150200 -0.4339800 0.0314940 -0.0297210 -0.0297210 -0.0297210 0.0176840 0.0000000 0.0000000 0.0188030 0.0072217 1.1405000 1.1405000 1.1405000 -0.4309300 0.0633660 0.2299300 0.2299300 -0.0855900 2.0083000 2.0083000 2.0623000 -0.0023553 -0.3279700 -0.3279700 -0.3197200 0.0416010 -0.6383100 0.0129920 -0.0173170 -0.0034627 -0.0125760 -0.4357500 -0.4339800 0.0946370 -0.0879910 0.4273800 -0.0297210 0.0176840 0.0176840 0.0000000 0.0188030 0.0072217 -0.4343100 -0.0629210 -0.4130000 -0.4395500 0.0633660 0.0633660 0.2299300 -0.4908900 -0.4908900 -0.0855900 0.0024969 -0.8614500 -0.1358700 -0.0023553 0.000 0.000 0.000 0.000 0.000 0.000 1.141 0.000 -0.431 0.000 0.000 0.230 0.230 -0.501 -0.501 0.412 0.412 -0.320 -0.005 0.000 2.005 -0.131 -0.136 0.118 0.118 0.000 0.000 0.000 0.000 -0.436 -0.436 0.000 0.000 0.493 0.493 0.000 0.000 -0.371 -0.371 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.141 0.000 -0.431 0.000 0.000 0.230 0.230 -0.501 -0.501 0.412 0.412 -0.320 -0.005 0.000 2.005 -0.131 -0.136 0.118 0.118 0.000 0.000 0.000 0.000 -0.436 -0.436 0.000 0.000 0.493 0.493 0.000 0.000 -0.371 -0.371 0.000 7.123024 6.897142 NA 14.298417 10.632885 10.952609 5.014498 7.884864 9.096648 10.818631 6.440765 3.821853 9.725306 8.915366 12.357130 7.921390 9.506353 7.782684 9.209256 6.262428 4.921389 12.287712 3.599461 3.599461 4.184423 5.921391 9.478024 11.723583 13.051360 10.136033 5.014498 9.506353 4.184423 7.553658 13.806680 11.993210 9.863122 11.972327 6.181216 13.593580 6.945237 10.136033 3.336426 13.973052 5.769388 12.271887 10.011679 9.121507 7.742420 8.933363 11.550747 9.486175 8.047923 12.245721 10.669136 4.336426 3.014498 8.903243 10.459514 10.578649 13.497308 10.473931 9.749480 10.107257 10.315996 12.233668 5.769388 8.299902 9.679835 7.164246 12.535118 12.503344 2.014498 5.262426 10.020124 11.418577 8.014500 8.354349 7.584355 14.298417 8.025727 8.878686 12.575788 7.058893 8.133441 11.882550 10.201852 6.495088 14.320276 7.728745 8.672711 11.453291 8.921390 8.123024 8.986043 12.132143 10.141204 12.188801 11.454330 11.739866 7.808915 7.808915 9.304518 8.047923 13.235800 NA 9.632885 10.608693 9.069782 8.194409 12.809322 10.136033 6.262428 9.930379 8.345416 10.859990 7.957014 9.036867 6.262428 6.686925 NA NA 10.231245 NA 9.591928 8.091315 12.959212 8.318280 9.903243 8.415379 NA 11.291787 12.489220 10.928885 8.262427 9.618126 10.498315 7.933363 4.921389 8.415379 11.065736 NA 8.872481 14.124004 9.036867 8.735599 7.243319 4.473930 11.237294 10.340929 9.834679 12.186927 9.929632 12.206792 11.825071 9.238501 9.247112 12.404131 10.091315 4.921389 1.014498 9.514385 5.599461 12.400901 7.686925 6.406817 NA 7.128450 8.299902 2.599461 6.440765 7.957014 9.518325 4.599461 7.490233 TCGA-AG-3883 69 0 NA 31 rectum stage i t2 n0 m0 25-9-2014 male 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 42.51.0 2 7 1 NA NA NA 4 4 5 3 NA NA 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 0 0 0 0 3.086566e-06 1.144457e-06 5.824773 10.226870 16.662738 6.226871 7.875398 8.207242 3.339351 NA 9.361713 4.924309 6.104880 11.368356 8.971613 9.812580 8.942229 9.348334 0.0155910 -0.3832500 -0.0337900 0.3895800 -0.4115100 1.0052000 0.3557000 -0.0868390 -0.0126330 0.3633900 0.7435800 0.3827500 0.4889900 0.4889900 0.3866000 0.0282820 0.0287040 3.6569000 0.0294100 -0.0741990 1.9437000 1.2169000 1.0334000 0.0251560 -0.3678700 0.0426730 0.0155910 -0.0083577 0.0000000 0.0096700 -0.4087500 -0.3959100 -0.4014400 -0.0337900 -0.0337900 0.3649800 0.3614300 0.0784530 -0.4115100 -0.6617400 -0.0763100 0.3394400 0.3827500 0.3548100 -0.3876600 -0.3876600 0.0282820 0.0282820 0.0474930 -0.4042200 -0.4050900 -0.3855100 -0.3855100 -0.0741990 -0.3768900 0.0211250 -0.3900000 0.0343370 0.000 0.000 0.000 0.339 0.383 0.383 0.000 -0.388 0.000 0.000 -0.350 -0.389 0.000 -0.374 -0.374 0.000 0.000 -0.362 -0.362 0.653 1.027 0.000 -0.390 0.000 0.000 0.000 0.000 -0.409 -0.409 0.000 0.000 0.361 0.361 0.000 0.000 -0.412 -0.064 0.000 0.000 0.000 0.000 0.000 0.000 0.339 0.383 0.383 0.000 -0.388 0.000 0.000 -0.350 -0.389 0.000 -0.374 -0.374 0.000 0.000 -0.362 -0.362 0.653 1.027 0.000 -0.390 0.000 0.000 0.000 0.000 -0.409 -0.409 0.000 0.000 0.361 0.361 0.000 0.000 -0.412 -0.064 0.000 0.000 0.000 7.887782 7.540979 3.017423 14.352721 9.104880 8.226870 5.824773 2.602386 9.141538 9.485023 6.187342 2.602386 11.110174 8.418297 11.439482 6.875398 9.778968 8.255822 8.136358 8.548798 5.717857 12.050840 NA 4.717857 4.017414 7.061811 8.983201 11.416161 12.740225 8.255822 6.265345 8.435269 4.476848 6.924308 13.532624 11.696017 9.775640 12.050152 5.616734 16.662738 8.177288 10.880054 3.017423 14.713515 4.824773 12.859767 9.971613 8.366145 8.207242 9.366145 11.668469 8.509270 8.383739 10.501233 10.164622 5.476848 3.339351 8.493151 10.136358 9.936280 12.179808 10.609874 8.263065 9.414022 9.260353 12.310889 6.146700 7.374969 8.265345 6.265345 12.254029 12.228697 NA 5.824773 9.426808 10.226870 7.409735 9.115449 7.302819 14.352721 7.167164 7.039784 12.149917 8.703917 7.983201 11.278337 10.958465 7.236392 14.685637 7.850307 8.517263 10.383739 8.893934 8.696897 6.717857 13.294123 9.811833 11.484003 10.835999 10.858195 8.373825 7.983201 9.207242 6.602380 12.648822 -0.582080 9.579660 9.631207 9.260591 6.875398 12.153767 10.880054 4.602380 11.367251 9.104880 10.138951 7.703917 7.717857 6.875398 8.339345 NA NA 8.930307 2.017423 9.221988 8.624747 12.963227 8.426808 9.714385 8.452045 2.017423 11.023042 12.998984 11.173500 9.361713 9.293542 10.352807 8.675629 4.187340 7.460361 10.190220 NA 6.061811 13.346092 8.992118 8.930307 7.146700 4.602380 11.018825 10.821548 10.666673 12.238400 9.812580 11.286544 11.329165 8.321198 9.244792 12.338218 8.942229 2.602386 1.017423 8.453045 6.798776 13.264751 7.321198 5.875399 1.017423 7.219639 7.374969 1.017423 5.717857 8.017417 9.418296 5.187340 7.125941 TCGA-AG-3885 71 0 NA 0 rectum stage iiib t3 n1 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 3 NA NA 42.51.0 1 2 2 NA 1 1 4 4 5 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.027185 11.538633 13.470766 6.233635 7.636601 8.385639 4.549139 NA 8.356492 2.326739 5.951236 11.759983 7.970601 7.828290 10.197110 11.971202 0.0030232 0.0030232 0.8035300 -0.0464760 -0.0159080 -1.2012000 -0.0599700 -0.0321280 -0.5450400 -0.5450400 -0.0102020 -0.0546620 2.1626000 2.1626000 2.0021000 0.0315480 0.5051200 0.0546310 0.0439570 1.9146000 0.5623700 0.5623700 0.5623700 -0.0717670 0.0030232 0.0030232 0.0030232 0.0398730 -0.5798600 0.4305500 -1.1413000 -0.1139800 -0.1341700 0.8035300 0.8035300 -0.0464760 -0.0571440 1.2647000 -0.0578380 -0.0559050 -0.0321280 -0.5593200 -0.0029380 -0.0375180 -0.1590200 -0.1400300 0.0097858 0.0315480 0.5051200 0.5099900 -0.5093100 -1.0601000 -1.1991000 0.0723660 0.0290140 0.4588400 -0.5119700 -0.0956730 0.000 0.000 -0.545 -0.545 0.000 0.000 2.061 -0.159 0.000 0.505 0.505 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.546 0.459 -0.490 0.000 0.000 -0.580 0.434 -0.114 -0.114 0.804 0.804 0.000 0.000 1.263 1.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.545 -0.545 0.000 0.000 2.061 -0.159 0.000 0.505 0.505 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.546 0.459 -0.490 0.000 0.000 -0.580 0.434 -0.114 -0.114 0.804 0.804 0.000 0.000 1.263 1.263 0.000 0.000 0.000 0.000 0.000 5.741782 7.081633 NA 15.655627 11.297330 7.027185 8.605969 8.280941 8.555564 9.184726 5.829246 NA 10.599764 8.797065 12.607516 8.630526 9.341695 7.753010 8.407119 3.911711 3.741780 12.749160 NA 7.456028 5.134102 6.201214 8.946354 10.394628 12.309263 9.116822 5.911708 9.261419 4.829246 6.326746 12.331902 11.940841 10.131952 11.922935 4.941064 13.470766 7.233636 8.780701 NA 13.809385 4.201210 13.065963 9.356492 8.549137 8.385639 9.017907 10.788907 7.951236 8.984957 14.771070 10.217516 3.549139 2.326739 8.970601 10.079405 10.394628 11.888988 10.447415 10.270491 8.334240 9.934075 12.603645 4.911706 8.134100 8.891530 6.099335 13.1341000 12.6075159 NA 7.0271850 9.7834418 11.5386334 8.1511734 8.0085692 5.6486725 15.6556266 8.2574826 8.2012143 12.5639551 5.2653431 7.2653450 11.7467053 10.1659489 7.4127925 14.1973667 7.9609512 7.9897101 11.8736396 9.1929938 7.9016537 8.3784071 11.7276245 8.2653445 11.8997610 11.3955234 11.4396190 7.5619615 7.0085687 8.9512360 7.2012143 13.6591398 NA 9.8889875 10.4831147 9.5165697 7.7417825 12.1501124 8.7807015 5.8710649 8.6182996 7.2809415 11.5982081 8.2093881 8.3749960 6.5231416 5.7417825 NA NA 7.9316074 0.7417474 9.5459136 7.1340998 13.5386334 5.8292458 9.5329455 7.5872727 NA 11.2760855 12.6736281 10.0860785 8.3564925 9.0993347 10.2032621 7.6121475 5.0637100 7.2963711 11.8078920 NA 7.9117078 14.0738192 7.6701527 9.1211610 6.9117072 4.8292458 11.8265910 10.9003923 9.5715054 12.1303381 7.8282901 12.7183467 12.1831706 9.0409908 9.3961681 12.5157460 10.1971098 2.3267387 NA 7.9659770 7.7752053 12.1195354 7.9117078 6.7417825 NA 7.2476731 8.1341003 NA 4.4422203 8.3928343 9.3674914 3.5491393 4.6486725 TCGA-AG-3887 68 0 NA 1124 rectum stage iia t3 n0 m0 25-9-2014 male 2009 NA NA rectal mucinous adenocarcinoma yes r0 0 NA NA 46.49.0 1 2 4 NA NA NA 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 4 0 4 0 0 0 7 0 0 0 0 4 0 0 0 4 0 4 0 0 1.872748e-06 6.242493e-07 8.064832 9.973089 11.817945 7.553186 9.309517 9.710055 2.343720 1.343749 10.579747 1.928692 7.044172 11.083513 9.404428 9.703482 9.238550 12.803676 0.0074538 -0.0150990 -0.0116570 0.0114210 0.6994500 0.6994500 0.7069500 -0.7602000 0.0256250 -0.0010162 0.6543700 0.6212700 0.6728300 0.6728300 0.6515000 0.0268890 0.0204360 0.0374530 0.0374530 0.0032838 0.7329600 0.7329600 0.7329600 0.0315520 -0.7638400 0.0388660 0.0074538 -0.0030935 0.0079738 0.0079738 0.0000000 0.0000000 -0.0178490 -0.0116570 -0.0116570 0.0114210 0.0053677 -0.0124170 0.6994500 -0.7510100 -0.7602000 -0.0010162 0.6543700 -0.0016360 0.0124690 0.0124690 0.0268890 0.0268890 0.0204360 0.0204360 0.0374530 -0.7634100 -0.7634100 0.0032838 0.7329600 0.0128880 0.0401080 0.0315520 -0.760 -0.760 0.000 0.000 0.654 0.000 0.651 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 0.733 0.733 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.699 0.699 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.654 0.000 0.651 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 0.733 0.733 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.699 0.699 0.000 0.000 0.000 6.913588 4.803165 2.343720 15.293308 8.577352 4.513655 8.085199 13.265202 9.794944 10.379906 6.016158 4.591661 9.980357 9.649794 11.755773 9.138148 10.019690 9.346547 8.064832 5.513658 2.928692 10.555621 1.343749 7.786676 6.513658 8.577352 9.679123 10.544631 11.948749 9.447020 8.415195 9.493480 7.366100 5.431195 12.849792 12.632887 9.262596 12.884345 6.274470 11.817945 5.898322 9.268545 NA 14.502105 4.591661 12.481044 10.157514 9.864469 9.710055 6.665660 12.093602 9.226437 8.943645 11.781485 10.215638 3.513655 1.343749 9.259612 10.644085 11.153501 12.857460 11.602887 8.882891 8.244599 11.120133 13.009068 6.928695 9.665660 10.035476 6.513658 11.797003 11.403753 1.343749 8.064832 10.475589 9.973089 8.727437 8.591660 8.538489 15.293308 9.026727 7.582137 11.102788 8.782524 8.176622 10.616362 11.009068 9.504007 14.305634 8.170281 8.473015 11.025849 10.751000 8.098620 7.001944 12.839338 11.238550 10.098620 10.005511 10.284780 7.296765 9.465266 10.719858 8.790816 12.268638 NA 8.523642 9.544974 10.565320 9.108604 12.809554 9.268545 6.958443 7.683583 7.819466 9.141394 9.570145 11.289725 7.736050 8.447020 NA NA 7.928695 3.343735 9.562901 6.125093 11.788747 8.913588 10.179783 10.599941 2.665666 10.973089 13.733095 9.480724 10.579747 8.939922 9.610519 8.748874 4.513655 10.772093 10.460583 NA 6.321012 13.317968 11.156712 9.360541 7.476104 5.629135 12.297929 10.403077 11.266317 11.175831 9.703482 11.692461 10.906929 8.057978 11.113868 11.674089 9.238550 2.343720 1.928692 7.517559 5.553185 13.280554 9.033731 8.163911 1.343749 7.921161 9.665660 6.629135 8.382651 8.176622 11.435168 3.928692 7.647513 TCGA-AG-3890 62 0 NA 518 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 7 1 NA NA NA 4 4 5 3 NA NA 6 0 0 0 0 0 0 0 0 0 4 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 6 2.01147e-06 5.895688e-07 8.1126564 10.4635636 12.6536876 8.3499071 8.9505509 9.6882961 4.3260627 0.4192153 10.5106049 3.7411002 7.2771507 10.6952939 9.8050319 9.9287466 10.3806192 9.6503907 -0.04061400 -0.07560900 -0.44867000 0.04047000 -0.32727000 -0.32727000 0.23427000 -0.07253900 -0.01105700 -0.01105700 0.02876500 0.03411500 0.84101000 0.25420000 0.25420000 -0.31131000 0.17845000 0.00014084 0.00014084 -0.01381300 1.05910000 1.05910000 1.05910000 -0.01188400 -0.39062000 -0.07884900 -0.04061400 0.08286100 -0.06114900 -0.04441300 -0.43626000 -0.07720900 0.17457000 -0.44286000 -0.44867000 0.04485900 0.02904600 0.27632000 -0.32727000 -0.08333000 -0.13121000 0.01126300 0.03411500 0.00000000 -0.41025000 -0.42156000 -0.29827000 -0.29827000 0.21407000 0.17151000 -0.51506000 -0.39930000 -0.41355000 -0.01381300 0.99987000 -0.71728000 -0.02602800 -0.01188400 0.000 0.000 0.000 0.000 0.000 0.000 0.310 -0.415 -0.298 0.178 0.178 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 1.059 1.059 -0.717 0.000 0.000 0.000 0.000 0.000 0.204 0.204 0.282 0.282 0.000 0.000 0.276 0.276 -0.327 -0.093 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.310 -0.415 -0.298 0.178 0.178 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 1.059 1.059 -0.717 0.000 0.000 0.000 0.000 0.000 0.204 0.204 0.282 0.282 0.000 0.000 0.276 0.276 -0.327 -0.093 0.211 0.211 0.000 7.091595 5.667097 2.741100 15.046351 9.826437 7.506632 8.599079 7.506632 9.210332 10.066628 7.239348 4.419168 9.571454 10.298753 11.620068 8.785492 10.228134 9.584077 9.482565 8.174057 4.119605 11.447076 NA 6.828561 5.911023 8.098650 9.4933109 11.4946487 12.3105735 9.7590195 7.6188421 9.9756756 6.4415366 6.8786015 13.5817182 12.6283182 9.7045717 12.5894076 7.2660388 12.6536876 6.3499066 9.5865876 3.4191748 14.4548278 4.8786027 11.9471352 10.4649292 9.7942089 9.6882961 8.1939565 12.4501814 9.5868636 8.3675366 11.6824387 10.7137903 0.4192153 3.8785978 9.6929652 10.2103324 11.0412213 13.5411886 11.0200117 7.9805720 8.9348694 10.6028049 12.5452286 6.7045718 9.2926136 10.6188418 7.0915951 11.6894649 11.4078542 2.0041418 8.1126564 10.9417510 10.4635636 8.6670970 8.1939565 8.5224572 15.0463511 7.8370223 8.4191693 11.3071517 9.1091675 8.7590196 10.9080139 10.8979391 8.4413154 13.8470061 8.5172017 9.6694680 10.6114623 9.7876760 8.3849538 9.7388416 11.7377123 10.7455990 11.0311165 10.5342132 10.3139872 8.1383532 8.9890252 10.8938895 8.5940950 12.5886405 -1.1801683 9.5714544 9.1010756 10.3907130 9.8847359 13.1276068 9.5865876 9.0190825 8.9466467 8.6188417 10.2818068 8.9965983 7.8200487 7.1056697 8.3320589 6.4852594 0.4192153 8.7985479 3.2265239 9.4525926 6.6089940 11.6812644 8.4415374 10.0190824 9.5815608 3.2265239 11.0898258 13.1702951 10.4135230 10.5106049 10.5432908 9.6694680 8.8157743 5.6286220 9.6310579 11.2602464 NA 9.1504886 12.5628716 10.0134941 9.9029852 7.7095574 5.5890953 12.6380354 10.5079577 10.9210067 11.2591606 9.9287466 11.4730954 11.2480994 9.2168310 9.9649448 11.4443091 10.3806192 4.5066337 2.7411002 7.5409099 7.0338789 13.2943429 9.3048658 7.8028737 3.4191748 8.2855830 9.2926136 7.7137900 7.8703807 7.4635636 10.9612341 4.5890923 7.2771507 TCGA-AG-3891 66 0 NA 548 rectum stage i t2 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 NA NA NA NA 2 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AG-3892 57 0 NA 396 rectum stage i t1 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 2 2 1 NA NA NA 4 3 5 3 NA NA 7 0 4 0 7 0 4 4 0 1 0 0 0 0 0 7 7 0 4 0 7 0 4 4 1 0 0 0 0 6.436704e-05 1.331732e-05 7.885760 10.507599 11.957899 7.722821 8.389084 9.442433 1.199248 NA 10.921213 2.199248 7.276075 10.246383 10.496176 10.338900 10.216068 11.732102 7.2829e-03 -2.0237e-03 -5.0619e-03 0.0000e+00 -5.6934e-03 -5.6934e-03 -5.6934e-03 -4.9349e-04 -4.9349e-04 -4.9349e-04 -9.0924e-04 -9.0924e-04 -3.8170e-03 -3.8170e-03 -3.8170e-03 7.5612e-03 6.7265e-03 1.0904e-02 1.0904e-02 -7.7066e-04 7.5612e-03 7.5612e-03 7.5612e-03 3.8076e-03 7.2829e-03 7.2829e-03 7.2829e-03 2.9744e-03 1.1703e-03 1.1703e-03 -9.9991e-04 -9.9991e-04 6.0965e-05 -5.0619e-03 -5.0619e-03 3.2521e-03 0.0000e+00 -2.2944e-03 -3.4456e-02 -4.9349e-04 -4.9349e-04 -4.9349e-04 -9.0924e-04 -9.0924e-04 2.4191e-03 2.4191e-03 7.5612e-03 7.5612e-03 6.7265e-03 -3.2785e-02 1.0904e-02 1.0316e-03 1.0316e-03 -7.7066e-04 7.5612e-03 3.8076e-03 2.9744e-03 3.8076e-03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.044750 6.006614 1.784211 14.760299 9.251827 2.784232 8.364167 5.153457 11.412364 12.450742 7.960811 4.658691 10.089524 9.774799 11.175824 8.552406 10.302547 8.503040 7.069624 3.521189 2.784232 10.964131 3.784221 7.512142 9.623426 8.437664 9.6401287 9.8996992 11.9373518 8.6213244 7.3890841 9.2893720 6.3890849 7.5301761 12.0564630 12.9593557 9.0066144 13.1590804 6.8431158 11.9578991 7.0696238 8.0696243 2.1992483 13.8985066 4.7842213 13.2560666 9.0478824 9.4583437 9.4424335 7.4376639 12.7560050 9.2707219 8.6463427 12.8612602 9.4087129 2.5211764 0.1992483 9.1621556 10.5513030 11.0178417 12.3074572 12.2518276 7.6991053 7.9541469 10.4111478 13.1849236 7.5391092 8.9674439 9.5479876 7.0447493 11.7926507 11.1829657 0.1992483 7.8857598 10.2340585 10.5075985 8.6545866 8.9203588 8.1992596 14.7602986 8.2436538 7.3182002 11.0082237 9.9373517 8.9969211 10.0773104 11.3097428 9.0830636 14.6986694 8.9936755 7.9740468 10.9424109 10.9057555 8.0384631 8.2491082 12.3946317 10.1879442 10.7973120 9.5368815 9.8467180 8.1697682 8.9936755 10.7785754 9.1211004 12.6797468 NA 8.6911126 8.9773366 9.7954493 9.7595923 12.6163209 8.0696243 7.2436538 8.7070540 7.1992591 9.0727037 9.7538484 9.2931525 6.8716847 8.2216272 0.1992483 NA 7.9066189 NA 9.8431156 5.8431145 11.4788701 9.5479876 10.2827389 10.5030403 3.5211890 10.0017759 13.2390354 9.9657885 10.9212132 10.3502760 9.6401287 9.0033906 3.8996977 9.8927465 10.9380105 NA 8.2760751 13.1008807 10.6526536 10.2160678 7.4184278 5.2867222 12.3531282 11.8431157 11.8778596 10.9674439 10.3389004 11.1893635 10.4996120 8.2599555 10.4637021 11.2579278 10.2160678 5.0572423 4.1061473 8.1932735 5.1992601 13.6198777 8.7879740 8.5786380 4.0066122 8.9873905 8.9674439 2.1992483 7.9203588 6.9135046 11.6704266 4.7228212 6.7842226 TCGA-AG-3893 74 0 NA 1065 rectum stage iiib t3 n1 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 1 NA NA 46.49.0 3 5 2 NA 2 2 4 3 3 1 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 4 2.982524e-06 1.005735e-06 8.961311 10.724912 12.847948 8.484223 8.816921 10.034116 3.952324 NA 11.094599 4.504862 8.254885 10.706319 9.846331 8.712862 9.868799 11.044022 0.00652620 0.00652620 -0.03326900 -0.00691950 1.75180000 -0.02534600 -0.01807800 0.01112100 0.01586600 0.02216100 0.01358400 0.01358400 1.28840000 1.28840000 1.14920000 -0.20722000 0.04970100 0.09870600 0.09870600 0.04741000 1.28020000 1.28020000 1.31820000 -0.35726000 -0.01379100 -0.01379100 0.00652620 -0.00013862 -0.04428000 0.07225300 -0.64546000 0.33448000 0.39114000 -0.03326900 -0.03326900 -0.00691950 -0.02054900 0.35430000 -0.64967000 0.01112100 0.01112100 -0.00140260 0.01358400 0.00000000 -0.61133000 -0.31622000 -0.57713000 -0.50629000 0.08536500 0.04970100 -0.60177000 -1.29290000 -0.63272000 -0.57802000 -0.00885260 0.02440800 0.13302000 -0.35726000 0.000 0.000 0.000 0.000 0.000 0.000 1.155 -0.316 -0.506 0.000 0.000 -0.602 0.000 -0.603 -0.603 0.000 0.000 0.000 0.000 0.000 1.280 0.000 0.133 0.000 0.000 0.000 0.000 -0.181 0.464 0.000 0.000 0.000 0.000 0.872 0.872 -0.603 0.000 0.000 0.000 0.280 0.000 0.000 0.000 0.000 0.000 0.000 1.155 -0.316 -0.506 0.000 0.000 -0.602 0.000 -0.603 -0.603 0.000 0.000 0.000 0.000 0.000 1.280 0.000 0.133 0.000 0.000 0.000 0.000 -0.181 0.464 0.000 0.000 0.000 0.000 0.872 0.872 -0.603 0.000 0.000 0.000 0.280 7.35831450 6.75967651 3.85278791 14.73158065 9.64162117 2.63040547 7.19517828 2.36737107 10.10747760 9.83822176 5.50486188 3.50486188 9.46749612 10.55124299 11.66152075 9.72138838 10.94252059 9.45269921 9.15134006 8.48005948 4.74587194 12.72006509 0.04544297 5.63039382 6.86561080 8.30281939 9.73018004 11.07678801 12.40792323 9.54527727 7.34921222 9.76823892 5.97616885 4.04543423 13.22829129 12.88088976 9.90496617 12.53176368 6.33083444 12.84794779 7.48005989 9.56310073 1.63040547 13.23895680 4.50486188 12.05875411 10.39415955 9.84471298 10.03411610 8.52924703 12.39719886 9.16696494 8.26943296 12.54403135 10.82268674 0.04544297 3.36735709 9.66381691 10.04965187 11.30693872 11.94252055 11.00615739 9.01409832 8.96131077 10.91501754 12.83659432 7.01121607 10.69288989 10.56801300 7.29335853 11.76139341 11.16761233 NA 8.96131077 11.32504202 10.72491156 8.79697535 8.56899353 8.42047103 14.73158065 7.70364269 7.97024397 10.61053351 7.93417442 9.10342315 11.11957289 11.26701856 8.30314920 14.18330314 9.34463945 9.20024955 10.35604419 9.12491613 7.44631083 3.63039382 11.57046279 9.68928763 10.87436127 10.03269541 10.12891070 8.09353694 9.25000250 10.85600309 9.27665252 12.62152126 2.63040547 9.15134006 9.08270392 10.34120034 8.45057289 12.91772154 9.56310073 7.56113135 9.40737527 8.89405439 9.65829986 9.57876119 8.65645633 6.66014140 8.61148557 5.21535632 1.04544297 7.94024899 NA 8.74587126 5.71785735 11.29750549 8.88778174 10.02127942 9.89092147 0.04544297 10.79194574 13.31660262 10.07885437 11.09459930 10.72227005 9.58070685 8.53728442 5.33083444 9.63788842 10.64960468 NA 4.04543423 13.02664191 9.66960544 10.30635100 6.90390955 5.25488500 12.57315276 10.85760877 11.15460916 10.97098584 8.71286227 11.70987871 10.02271138 8.91579604 10.26822629 10.45376119 9.86879864 NA 2.04544297 8.13887538 5.56899277 13.54950555 9.21033845 8.34005214 0.04544297 8.59644733 10.69288989 4.04543423 7.33083354 7.58459051 11.35263225 4.21536021 7.80698261 TCGA-AG-3894 65 0 NA 426 rectum stage iia t3 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 1 1 1 NA NA NA 4 4 5 3 NA NA 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 2.531678e-06 8.670129e-07 7.376254 11.105941 12.503662 7.948672 8.333469 8.820274 NA NA 11.075973 4.109469 6.929647 10.332263 10.053448 9.866841 9.442623 11.992875 0.03143600 0.03143600 -0.00286650 0.00319100 -0.00871460 -0.00871460 -0.00871460 -0.00263220 1.39190000 -0.00387790 0.00166420 0.00166420 0.69492000 0.69492000 0.69708000 -0.01105300 -0.00443120 0.00402430 0.00402430 -0.00332430 0.70907000 0.70907000 0.70907000 0.04259000 -0.01100400 0.00284190 0.03143600 -0.00401620 0.00212810 0.00027728 -0.00083160 -0.00083160 -0.00096541 0.00348590 -0.00286650 0.00319100 0.00319100 -0.00581400 -0.00871460 -0.00263220 -0.00526100 -0.00387790 0.00166420 0.00166420 -0.00126030 0.00024363 0.00416320 0.00416320 -0.00443120 -0.00443120 0.00402430 -0.00705760 -0.00705760 -0.00332430 0.70907000 -0.00373950 -0.01312700 0.04259000 0.000 0.000 0.000 0.000 0.000 0.000 0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.709 0.709 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.709 0.709 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.8908285 5.0163581 3.2793970 14.7746781 9.9038835 2.6944345 8.9232490 13.4367396 9.1066472 8.3140389 4.6330301 1.1094943 10.1470147 9.8492482 12.3765470 9.0342801 10.9328350 9.3140389 8.1483866 6.5188593 2.9168206 10.4888461 0.1094274 7.3478720 8.3855920 8.0694696 9.539920 10.613293 12.237462 10.017860 7.617262 9.495330 6.318921 5.016358 12.435054 12.737002 8.979832 13.054363 5.724178 12.503662 5.942357 8.727853 1.694435 14.732320 4.967450 12.820274 9.711238 9.451542 8.820274 6.903883 11.651048 9.013349 9.019361 8.954958 9.981373 NA 1.694435 8.985985 10.666931 11.119296 12.809040 11.701925 8.092461 8.103821 11.144885 12.913800 7.376254 9.115092 9.431396 6.648627 11.9447286 10.9596545 0.1094274 7.3762539 10.7649984 11.1059412 8.5103472 8.1593163 8.2179398 14.7746781 8.1647501 7.3091398 9.7442787 6.2592141 8.9612167 10.6340095 10.8467150 9.2986251 14.4543184 8.4223508 8.4358973 10.9168226 10.4526534 8.5315324 5.8373883 12.5778372 10.5606788 11.3750827 10.0133496 9.9612167 6.7225576 9.0461058 10.5492986 10.2831449 12.5762248 4.0163626 8.8543015 9.9993671 9.8626845 7.8710187 12.3213560 8.7278531 4.5017831 9.1346073 7.4757902 9.3454820 9.7204926 8.8420423 10.1428908 8.4403846 NA NA 7.0283305 1.1094943 9.3358798 5.8099083 11.9435437 9.5420096 10.0680205 10.6745698 3.4313956 10.6505643 13.7679024 8.7712458 11.0759732 10.2219072 9.6831148 9.1290584 2.6944345 10.2617526 10.8655319 NA 5.5017862 13.4942514 10.4155294 10.3250007 7.1155410 4.9168206 12.9639465 11.3733237 11.0012514 11.6731407 9.8668411 11.9631671 11.0088246 8.9518180 11.0374678 12.1122827 9.4426230 NA 3.2793970 8.3102683 7.9612170 13.4591636 9.3213561 8.4086758 NA 8.4403846 9.1150923 6.6793239 7.8643552 7.4040882 10.9368104 4.7533264 6.5689001 TCGA-AG-3896 85 0 NA 31 rectum stage i t2 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 5 2 NA 3 1 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 2.739761e-06 9.016934e-07 8.428235 10.756902 12.140871 7.904673 8.622086 9.673875 2.526169 1.204203 10.787316 3.204235 7.774089 10.887228 9.552961 9.324730 9.454531 12.633117 -0.190460 -0.202120 1.055800 0.222610 0.708990 0.708990 0.287320 -0.190380 -0.197430 -0.197430 0.163630 0.163630 1.625200 1.625200 1.575500 -0.170620 0.042670 -0.177070 -0.178270 0.294780 0.605850 0.756730 0.756920 0.010781 -0.164010 -0.164010 -0.190460 -0.212240 0.282350 0.277340 -0.222980 -0.229580 0.266480 -0.220640 -0.220640 -0.025406 0.222610 0.358970 -0.749460 -0.208630 -0.190380 -0.197430 0.163630 0.163630 -0.196300 -0.196300 -0.175210 -0.170620 0.042670 0.042670 -0.182270 -0.722470 -0.722470 0.294780 0.605850 -0.206780 -0.155340 0.010781 -0.206 -0.206 -0.197 -0.197 0.164 0.164 1.625 -0.196 -0.171 0.000 0.000 -0.182 -0.182 -0.722 -0.722 0.295 0.295 -0.202 -0.202 0.757 0.757 -0.207 -0.155 0.054 0.266 0.282 0.282 -0.200 -0.200 -0.221 -0.221 0.303 0.303 0.281 0.281 0.294 0.294 0.316 0.316 0.000 -0.206 -0.206 -0.197 -0.197 0.164 0.164 1.625 -0.196 -0.171 0.000 0.000 -0.182 -0.182 -0.722 -0.722 0.295 0.295 -0.202 -0.202 0.757 0.757 -0.207 -0.155 0.054 0.266 0.282 0.282 -0.200 -0.200 -0.221 -0.221 0.303 0.303 0.281 0.281 0.294 0.294 0.316 0.316 0.000 7.0745975 5.4136855 3.0115851 15.3960615 9.5125720 5.0622124 9.6199749 6.7120276 10.0715118 9.4942520 6.3335168 3.2042346 10.1141261 9.8262849 11.6784460 9.6051124 10.5317857 9.2070480 8.4663278 6.6960856 3.2042346 11.5289762 0.2042659 7.3437844 6.9591210 8.1642352 9.4616208 10.5034411 11.7395084 9.1555178 7.7891958 9.5749204 6.9046732 5.4896361 13.1476636 12.6320697 9.2154602 12.7275500 6.5792722 12.1408710 6.9321533 9.1584294 2.7891867 14.3592884 3.2042346 12.1954006 9.9691046 9.8534892 9.6738749 7.5171158 11.8157190 8.5306627 8.5573798 11.2554420 10.2252130 1.2042033 0.2042659 9.3590511 9.9372483 11.0960168 12.6331166 10.9219095 8.6471767 8.1467474 11.0590703 12.9029377 6.2486278 9.8731180 10.1511394 7.2916956 11.8642289 11.6141543 1.2042033 8.4282345 10.7010868 10.7569021 8.9986488 8.9355520 8.1642352 15.3960615 8.8299418 7.7356142 10.6471765 7.2486269 8.4616210 11.1386611 11.6476946 9.2765532 14.2941800 8.8004227 8.6051124 11.0637678 10.3866274 7.5792722 7.5617851 12.6562168 10.9201950 11.2983107 10.0868761 10.2042330 7.2569097 9.2513570 10.5272879 9.3940577 12.8532085 2.2042346 9.3075210 9.4311269 10.1320110 8.3641044 12.5488064 9.1584294 7.7740886 9.1230963 8.2154602 10.4651526 9.6636647 9.5727394 6.7433924 8.2042332 NA NA 7.5351502 NA 9.4521605 6.3127577 11.9587030 8.9081365 10.0450110 9.4088042 0.2042659 11.1371859 13.8831632 9.3488912 10.7873158 10.4639763 9.8872276 8.6759084 5.5965506 9.4568985 10.7935471 NA 7.3437844 13.5745118 9.6433575 10.1656827 6.9929191 5.1584299 12.6958357 11.1914971 10.9029377 11.5017226 9.3247301 12.0822840 11.2649290 8.4756961 10.0533723 11.7811897 9.4545315 1.2042033 1.7891867 8.3886623 5.8480896 13.8674576 9.1111237 8.2098574 1.7891867 8.8141136 9.8731180 NA 8.2863822 7.6718390 11.1685739 4.9046719 8.0929764 TCGA-AG-3898 61 0 NA 1461 rectum stage iia t3 n0 m0 25-9-2014 male 2006 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 4 1 NA 2 5 4 4 5 3 NA NA 7 4 4 4 0 0 0 0 0 0 0 0 0 4 6 7 0 4 4 4 0 0 0 0 0 0 0 4 6 2.70508e-06 1.075096e-06 8.6667932 10.4708935 16.3053831 8.4191499 9.7550588 9.4825753 1.3584525 0.3585088 10.9490410 3.8178893 7.9509110 11.0623575 9.7763065 9.5005611 9.1133416 8.5581264 0.05110300 0.35871000 -0.27643000 0.04940200 0.30629000 0.30629000 0.30393000 -0.04611600 -0.01106000 0.00978550 -0.13290000 -0.13290000 -0.00968060 -0.01413600 -0.01413600 0.00000000 0.01153900 3.65690000 0.04301500 -0.01298900 2.94990000 2.07390000 0.35479000 -0.04224500 -0.29113000 -0.29113000 0.05110300 -0.00221680 0.01796300 0.04797800 -0.27129000 -0.27129000 -0.27518000 -0.55707000 -0.27643000 0.04386500 -0.02356600 0.53713000 0.29024000 -0.02523200 -0.04611600 -0.00664320 -0.13290000 -0.13290000 -0.09973600 -0.20248000 0.00000000 0.00000000 0.01153900 0.02170100 -0.66716000 -0.61968000 -0.61968000 -0.01298900 2.57200000 -0.24703000 -0.00041585 -0.04224500 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 -0.202 0.000 0.000 0.000 -0.667 0.000 -0.635 -0.635 0.000 0.000 -0.264 0.000 0.712 0.712 -0.299 0.000 0.000 0.336 0.000 0.000 -0.271 -0.271 -0.281 -0.281 0.000 0.000 0.537 0.537 0.306 0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 -0.202 0.000 0.000 0.000 -0.667 0.000 -0.635 -0.635 0.000 0.000 -0.264 0.000 0.712 0.712 -0.299 0.000 0.000 0.336 0.000 0.000 -0.271 -0.271 -0.281 -0.281 0.000 0.000 0.537 0.537 0.306 0.306 0.000 0.000 0.000 7.335734 5.913043 3.528384 14.954090 8.737832 6.030879 5.058892 NA 9.899551 9.495445 7.241097 2.358453 9.726960 10.514537 11.612892 9.023790 10.804503 9.120005 8.375262 8.106647 4.882017 11.824020 2.680392 3.358453 6.958367 7.958367 9.553211 11.734579 12.630792 9.366883 8.528379 9.914960 7.044955 4.358453 12.583360 12.734851 9.742158 13.056290 8.021087 16.305383 6.528379 9.041449 3.528384 13.776834 4.680381 11.680945 10.274333 9.351958 9.482575 8.435269 12.275826 10.283266 8.413736 9.344296 10.559353 NA 1.943434 9.372474 10.269846 11.173036 12.753185 10.875139 9.039271 9.253272 11.463040 13.064734 6.866249 9.782620 9.416446 7.817885 11.7269604 10.9349383 3.1658155 8.6667932 11.0148789 10.4708935 8.6438562 8.5082012 9.0166654 14.9540897 8.7116009 7.9206964 10.1577356 8.5727730 8.9657843 11.1617779 11.0855235 9.9377322 14.4344344 8.9130429 9.0519408 9.8382342 10.4245432 9.1066469 3.5283838 12.2027674 11.2388028 11.1762371 9.6392247 9.9111230 8.8081804 9.9092008 10.7432378 9.2653445 11.9366238 3.3584525 8.8137812 8.6391782 9.5848661 6.1913435 12.6860066 9.0414486 5.6803834 9.7203977 8.4137362 9.6040066 9.6938443 9.6565166 7.4459170 8.7421582 5.0023110 4.3584525 8.1658090 NA 9.3946275 5.9731635 11.4110220 8.2891912 10.3570444 9.3946275 2.6803919 10.8711944 13.0729142 10.0675378 10.9490410 10.8209563 9.5233608 9.1299434 4.0588966 10.7225886 9.2758559 0.3585088 4.6063830 12.3453626 10.9114112 10.2593207 7.9805058 6.9583671 12.9750028 10.9434165 10.9887211 11.0440788 9.5005611 11.7951655 10.7582659 8.1786330 10.0220121 11.6040067 9.1133416 1.3584525 0.3585088 8.3317782 5.5283775 14.1846052 9.6134825 8.5082012 NA 9.0850467 9.7826202 NA 8.8096649 8.4512111 12.1984450 5.0588922 6.4459170 TCGA-AG-3901 67 0 NA 0 rectum stage iiib t3 n1 m0 25-9-2014 female 2007 NA NA rectal mucinous adenocarcinoma yes r0 2 NA NA 46.49.0 3 2 1 NA 2 2 1 3 1 2 NA NA 0 0 0 0 4 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 4 0 0 0 4 0 4 0 0 1.595304e-06 7.282908e-07 8.7468593 10.4897254 11.7732239 7.9035848 8.7741911 10.0369032 1.2311866 0.2311866 10.7349851 4.2311559 8.1736736 10.1365463 10.2198440 9.9222224 9.3212717 11.9084385 0.0425900 0.0425900 0.0307960 -0.0527690 -0.0242510 -0.0242510 -0.0290380 0.0384890 -0.0206870 -0.0206870 0.0000000 0.0000000 -0.0076101 -0.0076101 -0.0076101 -0.3389400 0.0161460 -0.0278080 -0.0278080 -0.0172540 0.1271200 0.1271200 0.1271200 -0.0306770 -0.3914100 0.0425900 0.0425900 0.0321400 -0.0098185 -0.0145030 -0.0548250 -0.0548250 -0.0548250 0.0315770 0.0307960 -0.0427880 -0.0610170 0.0195030 -0.0242510 0.0384890 -0.3908500 -0.0206870 0.0000000 0.0000000 0.0424800 0.0530940 -0.3389400 -0.3389400 0.0161460 0.0161460 -0.0278080 -0.3931900 -0.4006400 -0.0172540 0.1271200 0.0285260 0.0543760 -0.0306770 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.339 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.339 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.917660 8.334447 4.986047 15.241778 8.727014 4.318621 8.575455 11.475523 10.531512 10.212727 7.910639 4.138053 9.568781 10.497946 11.912837 9.185356 10.571009 9.107676 8.038514 10.461180 6.380906 11.934630 2.553090 7.219844 7.173674 8.070363 10.121424 10.060882 11.402962 9.655326 6.738954 9.935063 6.816122 6.420984 11.811418 13.095152 9.698765 13.081932 6.727334 11.773224 9.025575 10.817999 3.553090 14.330918 4.875013 12.074295 9.546309 9.865970 10.036903 9.871404 12.527789 9.495602 8.778054 12.044941 11.182444 4.231156 4.318621 10.096893 10.208439 11.943256 11.982703 11.195500 8.279537 7.706892 10.942775 13.113420 6.999344 9.452746 10.142551 7.972627 12.1214236 10.7972134 1.2311866 8.7468593 11.1069087 10.4897254 8.9827033 8.6018469 8.9726263 15.2417779 8.3960661 7.6741026 10.6905909 9.0703630 8.9281269 10.8893708 11.3462030 8.3049796 14.6336385 8.7028345 9.2170012 9.7703182 9.8273491 7.3079749 7.4695637 11.4967744 10.5315119 9.9315990 10.3119769 9.6657875 8.4357307 9.1470388 11.0569132 9.8347856 12.4339046 NA 9.1998262 9.3756136 10.8226817 10.6803080 12.7149751 10.8179992 8.4932542 10.0529333 10.0922463 9.6127023 10.2027029 9.7838284 7.1135578 9.0577078 NA NA 8.9176600 0.2311866 9.7566801 7.0385141 11.3364131 9.5188717 10.2339743 10.7339911 0.2311866 10.7028346 13.1965829 10.1839006 10.7349851 10.1259771 10.0385142 9.1853557 5.2755547 10.7290112 10.7165459 2.2311559 7.5349401 12.6540125 10.2659583 10.2741866 7.2084392 5.9860468 12.0308457 10.4172735 11.0051227 10.8133013 9.9222224 11.6240134 10.6709902 8.5620764 10.8232613 11.2318636 9.3212717 1.2311866 2.2311559 8.3565211 3.6905959 14.0675056 9.4234521 9.1911611 NA 8.3079749 9.4527464 6.1380506 8.4308318 7.0255748 11.4116901 5.4406134 7.0125195 TCGA-AG-3902 61 0 NA 974 rectum stage iia t3 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 2 2 4 NA 2 5 2 2 5 3 NA NA 7 4 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 4 0 0 4 0 0 0 0 7 0 0 4 3.537413e-06 1.144457e-06 9.1871796 11.1131791 12.6298284 8.5408166 9.2259280 9.6680193 1.9583601 0.6953703 10.5598223 0.3733976 8.0876442 10.4601982 9.8851512 9.8327378 10.1625245 11.1098004 0.01042400 0.02695900 -0.01993300 -0.00636680 0.74784000 0.74784000 2.96120000 -0.01133500 0.00881310 0.00881310 0.00930980 0.00930980 0.41848000 0.41848000 0.41848000 -0.03558500 0.00680440 0.62588000 0.02763800 0.02553100 0.83569000 0.83569000 0.83569000 0.04945600 0.01042400 0.01042400 0.01042400 -0.01635000 -0.00429290 -0.00097017 -0.50515000 0.28406000 0.49632000 -0.01629200 -0.01993300 -0.00636680 -0.01611100 0.00000000 -0.51404000 -0.01133500 -0.01133500 -0.01298900 0.00930980 -0.00456950 -0.00205650 0.00402430 -0.03558500 -0.03558500 0.00680440 0.01248800 -0.50445000 -0.32646000 -0.32646000 0.02553100 -0.48995000 0.00583090 0.01796300 0.04945600 0.343 0.000 0.000 0.000 0.000 0.000 0.418 0.000 0.000 0.000 0.000 -0.493 -0.493 -0.317 -0.317 0.000 0.000 0.000 0.000 -0.490 0.346 0.000 0.000 0.000 0.000 0.000 0.000 0.238 0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.234 0.748 0.429 0.429 0.000 0.343 0.000 0.000 0.000 0.000 0.000 0.418 0.000 0.000 0.000 0.000 -0.493 -0.493 -0.317 -0.317 0.000 0.000 0.000 0.000 -0.490 0.346 0.000 0.000 0.000 0.000 0.000 0.000 0.238 0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.234 0.748 0.429 0.429 0.000 8.077302 6.401304 2.832829 14.130162 9.994535 3.927991 9.404755 10.075138 10.328322 11.160485 7.776411 6.174299 9.751151 10.485838 11.700249 9.628427 10.615084 9.746264 9.050237 6.726545 4.439490 10.264043 4.765715 6.748438 8.492340 9.442177 9.7143613 10.9311015 12.1294335 9.0729710 8.1316219 9.4239275 7.4394877 5.9047803 11.2772804 12.1150761 9.6129971 13.1226394 7.0944979 12.6298284 6.1999471 8.2078694 3.9881120 13.8625252 2.8328293 12.5614464 10.2678374 9.9159467 9.6680193 8.6564867 12.7172782 9.4455312 8.0262435 12.0758959 10.6674448 3.7657151 0.9583601 10.0284820 10.1102232 10.6642813 11.6596675 10.8994086 7.8450735 9.3137120 11.7566978 13.1257791 6.3275940 10.1959693 10.4545490 7.6726064 11.8416407 11.4415050 0.3733976 9.1871796 11.2941235 11.1131791 9.0885026 8.6010145 9.4361194 14.1301622 8.5644578 8.6436939 10.5983046 9.6401851 8.5974001 10.9375480 10.7176944 9.1270583 13.8947229 8.7560225 9.6823062 10.8017586 10.1600765 7.5282165 7.7657157 12.2533646 11.0066208 10.7204662 10.2066839 9.9038049 8.2317679 9.6225120 10.9538926 9.9498829 12.5978276 NA 9.3166458 9.0885026 9.8048961 8.9742405 14.0623317 8.2078694 6.9202933 10.0751382 9.4177926 10.0936427 9.8095895 9.9070981 5.1657351 9.2552772 1.1807844 0.6953703 9.1823626 0.9583601 9.3936839 5.9202933 11.7953318 8.3203046 10.7121349 9.4681361 2.1807526 10.7149173 13.7771761 10.6393065 10.5598223 10.6442778 9.6431096 9.0893604 4.1282852 10.2251475 10.4394574 NA 7.7527767 12.7420414 9.7478947 10.4030308 8.2251477 5.7484371 12.7401988 10.9853454 11.0601179 10.9656219 9.8327378 12.0069614 10.7235089 8.5742972 11.4109455 11.4458661 10.1625245 0.6953703 1.3733976 7.8591272 5.8080272 13.0255152 9.6680193 9.1895822 1.1807844 9.0862007 10.1959693 -0.0415656 7.5607509 8.1742985 11.9334925 5.0458230 6.4555475 TCGA-AG-3906 67 0 NA 608 rectum stage i t2 n0 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AG-3909 69 0 NA 608 rectum stage iiib t3 n1 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 3 NA NA 46.49.0 3 5 3 NA NA NA 4 3 5 3 NA NA 6 0 0 0 4 0 4 0 0 0 0 0 4 0 4 6 0 0 0 0 4 0 4 0 0 0 0 0 4 2.323595e-06 4.855272e-07 8.261802 10.870181 13.055603 7.609725 8.689895 9.705408 1.743472 NA 10.709261 3.617945 7.674213 10.757497 9.025793 9.184373 10.182268 11.552966 -0.3002800 -0.3106700 0.0046859 0.0161460 0.0988510 0.0988510 0.3572400 -0.3343500 0.0061090 0.0049161 -0.0120240 -0.0120240 0.6310600 0.6310600 0.6310600 -0.6774700 0.6255100 -0.0023553 -0.0023553 -0.0223320 1.2594000 1.2594000 1.2594000 -0.0767810 -0.3207500 -0.3207500 -0.3002800 -0.0054798 0.0214630 0.0214630 -0.3130700 -0.9728100 -0.3082000 0.0046859 0.0046859 0.0080495 -0.0037395 0.6160600 -0.6973900 -0.3264600 -0.3424000 0.0049161 -0.0120240 -0.0228810 0.0016642 0.0016642 -0.6774700 -0.6774700 0.6170700 0.6255100 -0.7009100 -1.0200000 -1.0200000 -0.0223320 0.6656700 -0.3432000 -0.3410200 -0.0767810 -0.326 -0.326 0.000 0.000 0.000 0.000 0.631 0.000 -0.677 0.626 0.626 -0.699 0.000 -0.317 -0.988 0.000 0.000 -0.311 -0.311 1.259 1.259 -0.343 -0.341 0.000 0.000 0.000 0.000 -0.313 -0.313 0.000 0.000 0.000 0.000 0.616 0.616 -0.677 0.000 0.000 0.000 0.000 -0.326 -0.326 0.000 0.000 0.000 0.000 0.631 0.000 -0.677 0.626 0.626 -0.699 0.000 -0.317 -0.988 0.000 0.000 -0.311 -0.311 1.259 1.259 -0.343 -0.341 0.000 0.000 0.000 0.000 -0.313 -0.313 0.000 0.000 0.000 0.000 0.616 0.616 -0.677 0.000 0.000 0.000 0.000 6.650367 5.802369 2.480446 14.815354 10.060889 5.016496 5.617945 4.245975 10.469127 8.903348 6.224604 2.965877 9.365528 9.986650 11.864578 9.267038 10.528111 8.920065 8.041157 9.269650 3.328434 12.488590 1.158531 5.158515 7.377683 7.471397 9.365528 10.663333 12.658609 9.305719 5.886436 9.607662 5.112708 6.245977 12.848075 12.856350 9.674214 12.576366 6.425113 13.055603 6.348339 8.747229 2.480446 13.763415 4.406441 11.465715 9.666309 9.435336 9.705408 8.016495 11.777817 8.287797 9.315861 10.338423 9.883028 2.158499 1.158531 9.022700 9.881321 11.366748 12.659854 10.786048 8.952962 8.978693 11.642284 12.500033 6.462294 9.443916 11.243986 7.101028 12.4058481 11.1940003 0.1584663 8.2618016 11.1192399 10.8701809 8.7434763 8.6820760 8.1585138 14.8153538 8.3031720 7.8658730 10.5422182 6.6342477 8.4439162 11.1322113 10.9529298 7.6585985 13.9353581 8.4577219 9.3704021 11.3012592 10.3133320 7.1471988 8.4577219 11.6256100 10.4950204 11.7755221 10.2124397 10.1528674 8.7695387 9.1946874 10.4713968 9.4088123 12.9112562 NA 9.3209052 9.3872365 10.3069905 9.0714034 12.3038092 8.7472286 7.5931423 9.3679673 8.2246032 11.1068811 9.9200652 8.8939006 7.5248363 7.9594137 NA NA 7.2353298 NA 9.6996105 5.8589532 12.4013903 8.5763664 10.2083624 9.2272922 1.1585309 11.1436442 13.3624736 9.1808818 10.7092606 10.4288092 9.6443432 8.8095656 6.3679668 9.4229564 10.5929962 1.1585309 7.2565456 13.3921336 9.5008108 10.0639009 7.0288785 5.1127085 12.3517312 10.8441388 11.0265647 11.6707606 9.1843733 12.1721855 11.3957239 8.4346382 9.4111794 11.9025068 10.1822682 3.6179449 NA 8.3410571 5.1585148 13.4961358 8.9722952 8.1641386 1.1585309 8.6382940 9.4439162 1.1585309 7.0533319 6.9266981 11.0024350 4.4804396 5.3284380 TCGA-AG-3999 61 0 NA 853 rectum stage iiic t3 n2 m0 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes r0 20 NA NA 46.49.0 3 4 2 NA NA NA 4 4 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 4 0 0 0 0 7 0 0 7 2.70508e-06 7.282908e-07 6.79035501 10.72693882 11.80884861 7.21199534 9.30062002 10.72000693 1.60715274 0.02219024 10.29480039 3.48159603 7.68038203 10.80516878 8.92906130 9.08383883 10.29129723 8.74326990 1.215500 0.372550 -0.458610 0.000000 -0.455610 1.259000 1.188400 0.384420 0.013264 0.013264 -0.031329 3.631200 1.373200 1.373200 1.380700 -0.396380 0.072449 -0.407440 -0.407440 0.104440 1.770200 0.746010 2.190800 0.126580 -0.420750 -0.420750 -0.420750 -0.400700 -0.018440 0.401670 -0.444440 -0.444440 -0.444440 -0.458610 -0.458610 0.042501 -0.013580 0.426540 -1.292900 -0.044772 0.406050 0.013264 -0.058278 -0.025022 -0.404360 0.107940 -0.396380 -0.396380 0.072449 0.070174 -0.405240 -0.921340 -0.921340 0.104440 0.049592 0.052719 -0.383240 0.126580 0.000 0.384 0.000 0.000 0.000 0.000 1.381 0.108 -0.396 0.000 0.000 -0.284 -0.284 -0.921 -0.921 0.000 0.000 -0.048 0.373 1.770 1.770 0.000 -0.348 -0.372 0.375 0.000 0.000 -0.444 -0.444 -0.381 -0.381 0.000 0.000 0.000 0.427 -0.449 0.739 0.000 0.000 0.127 0.000 0.384 0.000 0.000 0.000 0.000 1.381 0.108 -0.396 0.000 0.000 -0.284 -0.284 -0.921 -0.921 0.000 0.000 -0.048 0.373 1.770 1.770 0.000 -0.348 -0.372 0.375 0.000 0.000 -0.444 -0.444 -0.381 -0.381 0.000 0.000 0.000 0.427 -0.449 0.739 0.000 0.000 0.127 6.307572 4.976368 3.607129 13.883638 9.662416 4.976368 10.040371 5.576758 9.027795 8.279559 5.576758 2.022155 9.622083 9.399381 12.087587 9.648391 11.126769 9.088260 8.569065 9.692827 5.448435 11.715222 NA 4.777057 4.880152 7.279559 9.58250350 11.29071260 12.32908670 11.01935005 6.54573212 9.26534453 5.34409702 4.27009532 12.94512657 12.11921509 9.12807915 12.43050033 6.49303242 11.80884861 6.43156112 9.58632002 0.02219024 15.38917573 3.72260810 11.13526160 10.59581776 9.53589821 10.72000693 7.75009126 12.25758652 9.74326973 8.70516512 9.69459591 11.78122650 2.82952487 2.02215472 9.35756102 11.35364738 10.57867667 12.26683174 13.05111263 9.72659301 7.61462740 11.01364279 13.77214473 6.27009719 8.67680653 9.35308748 7.44843517 12.29742212 11.53342907 NA 6.79035501 10.92605244 10.72693882 8.66602690 8.39720999 8.21199534 13.88363750 8.66962918 7.89253553 10.13981365 6.97636707 9.69636286 11.46459578 11.49841050 8.48638938 14.25586514 8.21199534 9.10963349 10.77204003 10.55647348 7.71565729 4.97636822 12.60854128 10.48569499 11.66512483 9.90328462 10.39829596 7.78949452 9.35756102 10.45471251 9.29596610 12.80170939 2.02215472 9.39720999 9.83307951 9.84712940 6.28895648 12.19522304 9.58632002 6.25098999 11.53885555 8.53787028 9.89099319 9.74155934 9.77041382 7.44002282 9.62765006 7.19209551 0.02219024 6.91698890 NA 8.98795492 5.63687979 12.18078026 8.70867111 10.51201854 8.84234940 0.02219024 11.19459811 13.76363757 10.11756765 10.29480039 10.97491185 9.33050955 8.98217249 4.19209946 9.50195081 10.32053105 0.02219024 3.19209946 13.61754464 8.97927256 10.70867111 7.08965916 5.06656283 12.61975761 10.62115352 10.84951332 11.60101499 9.08383883 12.22460055 11.28426542 9.08016224 10.35837582 12.76847494 10.29129723 0.02219024 4.34409702 8.37372824 6.19209551 13.60912761 8.66962918 8.14629169 0.02219024 8.62457250 8.67680653 6.69459608 6.39721084 8.20207973 10.98362027 4.02217248 7.65152749 TCGA-AG-4001 74 0 NA 1096 rectum stage iia t3 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 4 3 NA 1 1 4 4 4 1 NA NA 7 0 0 0 0 0 1 0 0 0 0 0 4 0 6 7 0 0 0 0 0 0 1 0 0 0 0 0 6 2.947844e-06 1.213818e-06 8.662304 11.074369 12.391697 7.699170 8.603410 9.633158 5.323302 NA 10.533684 4.885184 7.958891 10.678339 9.760708 9.956125 9.627953 9.085803 -0.177780 -0.177780 -0.189490 0.094672 0.142950 -0.206850 0.664200 -0.041702 0.181320 0.181320 0.383860 0.379690 0.757000 0.757000 0.757000 0.070817 0.119760 0.132880 0.132880 0.292900 1.211400 1.575400 1.575400 0.021463 -0.177780 -0.177780 -0.177780 0.662720 0.184040 -0.543100 -0.200870 -0.497670 -0.193670 -0.189490 -0.189490 -0.864840 0.093333 0.000000 -0.865390 -0.041702 -0.193500 0.181320 0.383860 -0.187100 -0.183830 -0.496530 0.070817 0.070817 0.131760 0.119760 -0.777780 -0.503760 -0.503760 0.292900 0.067661 -0.190870 -0.174240 0.021463 0.000 0.000 0.181 0.181 0.379 0.192 0.757 -0.497 0.000 0.120 0.120 -0.363 0.133 -0.504 -0.504 0.133 -0.160 -0.178 -0.178 1.211 1.575 -0.191 -0.174 -0.189 -0.189 0.184 0.184 -0.201 -0.201 0.183 -0.189 0.000 0.000 1.300 0.000 -0.835 0.000 0.783 -0.117 0.000 0.000 0.000 0.181 0.181 0.379 0.192 0.757 -0.497 0.000 0.120 0.120 -0.363 0.133 -0.504 -0.504 0.133 -0.160 -0.178 -0.178 1.211 1.575 -0.191 -0.174 -0.189 -0.189 0.184 0.184 -0.201 -0.201 0.183 -0.189 0.000 0.000 1.300 0.000 -0.835 0.000 0.783 -0.117 0.000 8.0078010 6.9862676 5.3572494 14.8735287 9.1622065 4.3904201 7.2885376 -0.0689978 10.0538134 9.5438539 6.3739283 1.9310022 8.9111250 11.3179255 12.1960143 9.7024749 10.8067346 10.4807700 8.5856213 10.8498486 5.5456966 13.0210977 -0.0689978 5.4228385 0.9310022 7.0078010 9.704124 11.212915 12.581813 9.297307 8.044727 10.413793 6.788966 4.975378 12.956471 12.989315 10.347783 12.898031 6.438780 12.391697 7.100910 10.140439 2.252900 14.645070 6.018447 12.593209 11.100910 10.362075 9.633158 9.477880 11.739950 9.334189 8.782734 6.978000 10.756739 2.515939 6.306025 9.741557 9.950576 11.529503 13.039346 10.598097 8.810568 9.432822 11.228440 12.193667 6.930986 9.685873 11.011137 7.751164 11.4087436 11.0775540 -0.0689978 8.6623045 11.3671763 11.0743686 9.0051268 9.0290174 9.0473293 14.8735287 9.0210977 8.2885371 10.4604159 8.8378758 8.7764755 11.9171829 10.4228384 8.4641205 14.2436556 8.2973074 9.4387800 9.9671590 10.0654117 8.1598042 5.2529152 12.1836508 11.5234424 11.8128640 10.3329314 9.5290379 8.4387798 9.4913182 10.6357536 8.8764292 12.6796478 1.9310022 9.5140680 8.9412337 10.7495675 7.1306581 12.5278739 10.1404387 7.1693899 9.7415570 9.3614379 9.6244723 9.1646050 8.2147218 6.7254017 8.7827342 NA NA 8.6758191 0.9310022 9.9943805 6.6589055 11.8393779 8.5927635 9.8028905 9.2973074 1.9310022 11.4754669 13.6709768 10.4067187 10.5336842 10.3718545 9.6227289 8.8528263 6.8851814 9.0858033 10.2812948 NA 5.3572494 12.7739249 8.8909871 10.2047809 7.4350493 6.0395091 12.3043943 10.5131273 10.6950275 11.5820370 9.9561249 12.2934771 11.3682172 9.0499264 10.9461774 11.7148021 9.6279528 0.9310022 3.3904201 7.6332270 6.7383409 13.8902628 9.1183374 8.2163874 NA 8.6520845 9.6858729 4.8378777 7.0078010 8.0908566 11.6174858 4.8851839 6.7123454 TCGA-AG-4005 64 0 NA 427 rectum stage iv t3 n2 m1 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 7 NA NA 46.49.0 3 4 2 NA 2 5 4 3 5 3 NA NA 7 0 0 0 4 0 4 0 3 0 0 4 0 0 7 7 0 0 0 0 4 0 4 0 0 0 4 0 7 2.635719e-06 1.35254e-06 8.333788 11.195546 12.681843 7.643856 9.161488 9.824328 NA NA 10.651492 3.723286 7.455095 11.120507 10.300720 9.920564 9.971218 8.855515 0.0229830 0.0121860 -0.0353970 0.4387900 -0.4824300 0.6538000 0.4351600 0.0135790 0.0061952 0.0061952 0.0018890 0.0018890 2.5101000 2.5101000 3.6569000 -0.4089700 -0.4024100 0.0696140 0.0696140 0.0627400 0.4627400 0.4627400 0.4627400 -0.0032007 0.0847320 0.0638260 0.0229830 -0.0048988 0.5282900 -0.5821900 -0.4497900 -0.4556900 -0.4729100 -0.0315470 -0.0353970 0.4504800 -0.4660900 -0.0054697 -0.4824300 0.0000000 0.0135790 0.0061952 0.0018890 -0.0091762 -0.4358700 -0.4358700 -0.4089700 -0.4089700 -0.3985700 -1.0225000 -0.4079800 -0.4512700 -0.4716500 0.0627400 0.4627400 -0.9009500 -0.4112800 -0.0032007 0.000 0.000 0.000 0.000 0.000 0.000 2.510 -0.436 -0.409 -0.402 -0.402 -0.408 0.000 0.000 -0.443 0.000 0.000 0.000 0.000 0.463 0.463 0.000 -0.411 0.000 0.000 0.528 0.528 -0.450 -0.450 0.000 0.000 0.439 -0.021 0.000 0.000 -0.077 0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.510 -0.436 -0.409 -0.402 -0.402 -0.408 0.000 0.000 -0.443 0.000 0.000 0.000 0.000 0.463 0.463 0.000 -0.411 0.000 0.000 0.528 0.528 -0.450 -0.450 0.000 0.000 0.439 -0.021 0.000 0.000 -0.077 0.406 0.000 0.000 0.000 6.748826 6.559792 2.915942 15.241954 9.824328 5.982024 9.934136 5.342199 8.852574 8.519562 5.798579 2.237870 9.670823 10.490529 11.788611 10.329162 10.724900 9.611164 8.867220 8.707099 4.723291 10.938997 NA 4.822827 5.308252 5.870133 9.6076793 10.8122681 12.4385173 9.5416445 7.5669871 9.9562254 6.4077895 5.1253907 12.4363089 12.9417674 9.2082573 12.8291992 6.5741469 12.6818434 6.6024361 9.2197164 2.9159415 13.8984837 4.8228270 11.2580104 10.1709643 9.9489319 9.8243284 8.1873986 12.0221715 9.0758070 9.0631408 11.4212511 11.1156081 2.9159415 0.9159415 8.6708233 10.4724418 11.1063778 12.6464059 11.0877380 9.2468527 8.5561807 11.0871000 13.0319547 6.5597916 8.8817200 10.2254121 7.1827221 11.79321987 11.72771178 NA 8.33378821 11.04134923 11.19554630 8.34220048 8.38761112 8.85551480 15.24195435 7.70383853 8.08084257 10.99542050 8.55256036 8.62674210 11.33800048 10.30932616 8.91017590 14.48875436 8.94660279 9.63874325 10.33273322 10.46186555 7.54529272 6.90462017 12.19264176 10.46186555 10.29747873 10.18272234 10.43360516 8.25578584 9.45896759 10.92226179 8.74882582 12.85210067 NA 9.28880080 9.26855299 10.13025483 8.10081107 12.18827391 9.21971645 7.71035186 10.28335047 8.76768492 9.97257348 9.30395309 8.79131659 6.81075413 9.14234783 4.72329097 NA 7.29964030 -0.08405849 8.76768492 5.50089763 12.20969476 8.54893093 10.17332360 9.37536726 1.50090401 11.48198979 13.75661532 10.16267631 10.65149179 10.91523114 9.54346959 9.09833007 3.37537312 9.92015617 11.11717749 NA 7.18272209 13.38162967 10.24051016 10.15672702 7.43949764 5.00339985 13.40741308 10.89607533 10.92786180 11.43311297 9.92056351 12.40176506 11.12964751 8.89035032 9.92925841 12.16534551 9.97121819 NA 1.50090401 8.24097112 6.08586014 13.53684284 9.67582387 8.06059380 -0.08405849 8.94957900 8.88171998 1.50090401 7.37536704 7.00339872 11.67914811 5.96033099 5.40778781 TCGA-AG-4007 86 0 NA 31 rectum stage iv t4 n2 m1 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r2 5 NA NA 46.49.0 3 7 4 NA 1 1 4 4 5 3 NA NA 7 0 0 0 0 0 1 0 0 0 0 0 0 4 4 7 0 0 0 0 0 0 1 0 0 0 0 4 4 4.196342e-06 1.35254e-06 8.5262046 10.3402791 13.3961663 7.9126732 8.4733880 9.2575015 2.5907457 0.2687937 10.6898296 3.0761657 7.0102842 10.5461041 9.1757075 9.6108914 10.3049903 11.5622884 -0.00733390 -0.01642900 0.41145000 0.44359000 0.91077000 0.91077000 0.88486000 -0.01415000 0.43125000 0.41178000 -0.00981850 -0.00069303 0.88146000 0.88146000 0.83027000 -0.00152430 0.43142000 1.12440000 0.70607000 0.45377000 2.01080000 2.01080000 2.07190000 -0.16128000 -0.02271400 -0.02271400 -0.00733390 0.38551000 -0.45286000 -0.06424000 -0.01522100 -0.90411000 0.00110930 -0.00429290 0.41145000 -0.00954260 -0.53053000 0.44325000 -1.04280000 -0.00097017 0.00000000 0.43682000 -0.00981850 -0.01835300 -0.00595220 -0.03148700 0.00000000 0.00000000 -0.02589300 -0.00788630 -0.51414000 -0.48313000 -0.48313000 0.45377000 -0.00595220 -0.01807800 0.40377000 -0.16128000 0.000 0.000 0.412 0.412 0.000 0.000 0.830 0.000 0.000 0.000 0.000 -0.472 0.000 -0.442 -0.442 0.454 0.454 0.000 0.000 0.462 2.051 0.000 0.000 0.408 0.408 0.000 0.000 0.000 0.000 0.427 0.427 0.444 0.444 1.317 0.443 0.875 0.875 0.000 0.000 0.970 0.000 0.000 0.412 0.412 0.000 0.000 0.830 0.000 0.000 0.000 0.000 -0.472 0.000 -0.442 -0.442 0.454 0.454 0.000 0.000 0.462 2.051 0.000 0.000 0.408 0.408 0.000 0.000 0.000 0.000 0.427 0.427 0.444 0.444 1.317 0.443 0.875 0.875 0.000 0.000 0.970 7.4684888 6.1267974 2.2688236 14.6223882 9.1606006 6.8079757 8.4032430 0.2687937 9.3799525 9.8195636 6.3562794 4.0761743 9.7626722 9.9692564 12.0538605 8.8157112 10.4474816 9.0237042 9.3483015 7.4083680 3.4387453 12.5197073 1.2687937 3.9692610 6.2911854 7.0102842 9.263170 11.030368 12.300173 9.199554 6.590744 9.326809 6.151459 6.744550 12.829627 13.158511 9.509608 13.092980 6.695082 13.396166 8.157560 9.302240 2.590746 14.894240 5.126799 11.462342 10.032029 9.130648 9.257501 8.251810 12.212064 9.211331 8.296723 10.799223 9.964045 3.076166 2.590746 8.972720 10.095365 10.973585 12.494024 10.784517 9.776611 8.912673 11.043489 12.786978 7.037001 9.705528 9.934153 6.941242 11.9113198 11.2779455 0.2687937 8.5262046 10.7596676 10.3402791 8.0697167 7.9830620 9.0035263 14.6223882 8.7884531 8.1205660 11.9474169 7.8761473 8.2911845 11.0745606 10.9314851 8.2723065 14.5876420 8.4684892 8.8462457 11.1422609 10.3295127 7.5634373 9.4236349 11.9950349 9.7506162 12.7659201 9.9305948 10.2884075 8.7903778 9.3980998 10.5426124 8.4782701 13.0396107 2.2688236 9.4879853 9.4253802 9.6782077 8.8310592 12.3396086 9.3022398 6.8537799 9.0567193 8.3877580 10.0599797 9.3429582 8.7449552 6.5542189 9.0599795 0.2687937 1.8537961 8.9377016 NA 9.7013586 6.7923791 12.3562796 8.2911845 10.1205658 9.1299038 0.2687937 11.5314989 13.2967228 10.0921840 10.6898296 10.1221263 9.8021465 8.9234529 4.3562776 8.5997336 10.1184096 0.2687937 8.2856251 13.5615697 8.4928186 10.1299036 7.4326171 5.5542205 12.5562406 10.6503597 11.2288187 12.2043502 9.6108914 11.8518995 11.5862294 8.3721046 9.7944745 11.7389672 10.3049903 NA NA 8.7182130 7.0501762 13.8490753 8.7200277 7.8687294 2.5907457 8.5066960 9.7055284 NA 6.5167448 8.0761716 11.1399519 4.7282471 6.8537799 TCGA-AG-4008 63 0 NA 518 rectum stage iia t3 n0 m0 25-9-2014 male 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 4 1 NA 1 1 4 3 5 3 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 2.01147e-06 5.895688e-07 7.4171875 10.7202566 12.2719345 7.3102719 8.8157368 10.0037106 1.1504297 0.1504297 10.8629280 4.2378620 8.0811383 10.6442565 10.2497488 9.8916320 10.0223062 11.4490364 -0.04011600 -0.04011600 -0.33144000 -0.00678130 -0.26781000 -0.26781000 0.90835000 0.00332990 0.00946000 0.00680440 0.04162700 0.04344000 0.59176000 0.59176000 0.59176000 -0.42621000 0.05366400 0.12653000 0.11277000 -0.25092000 1.25220000 1.25220000 1.21940000 0.02188400 -0.02054900 -0.02054900 -0.04011600 -0.00013862 -0.58559000 0.00895440 0.03340800 -0.28774000 0.02356600 -0.32612000 -0.33144000 -0.00678130 -0.01340200 0.03538300 -0.61508000 0.00332990 0.00332990 0.00680440 0.04344000 0.02328600 -0.26889000 -0.31900000 -0.42621000 -0.42621000 0.05366400 0.05366400 -0.49830000 -0.54824000 -0.54824000 -0.25092000 1.25220000 -0.26167000 -0.05050600 0.02188400 0.000 0.000 0.000 0.000 0.000 0.000 0.592 -0.319 -0.426 0.000 0.000 -0.386 0.113 -0.548 -0.548 -0.251 0.000 0.000 0.000 1.252 1.252 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.000 0.000 0.166 0.000 -0.615 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.592 -0.319 -0.426 0.000 0.000 -0.386 0.113 -0.548 -0.548 -0.251 0.000 0.000 0.000 1.252 1.252 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.000 0.000 0.166 0.000 -0.615 0.654 0.000 0.000 0.000 7.772452 6.559792 4.609832 14.945090 9.164422 2.472332 8.069264 4.057294 10.134819 9.557669 6.104597 2.957747 9.956145 10.438113 12.436092 9.277106 10.926834 9.510151 9.048247 10.485791 4.905288 12.449609 2.735371 5.472329 6.658196 7.516724 9.6261345 11.0602941 12.3941700 8.8543046 7.5850294 9.9415638 6.6895592 5.3598550 12.2618627 12.9421744 9.5597920 13.0831694 6.7503144 12.2719345 7.1276807 9.8868030 0.1504297 14.6989219 5.4358019 11.7879315 10.1305406 10.0037106 10.0037106 8.9019451 12.1451080 9.4006993 8.4857915 11.5640289 10.6261344 3.1503972 3.1503972 9.8749148 10.1961607 11.4218640 13.0722419 10.9601692 8.3695694 8.9641823 11.3315284 13.0807687 7.4358036 9.4969147 10.1060509 7.9052883 11.6271472 11.0474901 2.1503972 7.4171875 11.2543444 10.7202566 8.8157368 8.7240482 9.0512677 14.9450905 8.4768304 7.7126432 10.3014175 8.1504008 9.0391442 10.6963308 11.1333946 8.7351004 14.4196007 9.2191792 9.1333945 9.7779348 9.9737682 8.0452185 6.6895592 12.0452188 10.4678136 9.9529174 10.1546214 9.9301204 8.6730610 9.7595798 10.9472518 9.1947950 12.0022242 -1.4489024 8.7870256 8.4783579 9.9641821 8.6739630 12.4593088 9.8868030 8.3744027 9.2484331 9.3026858 9.3744027 10.0114880 8.7533224 6.2164898 8.8577602 7.0929157 4.6739634 8.2272164 NA 9.2615367 5.7651104 11.4490364 8.7540273 10.1518092 9.5682535 1.7353489 10.4530399 13.3725921 9.6972955 10.8629280 10.5912702 9.9513009 8.8851106 5.2378620 10.0299842 10.3156220 0.1504297 5.8228270 12.6213140 9.9399347 10.3756085 7.3695694 5.3203258 13.2340465 10.7540273 10.8732085 10.8325177 9.8916320 11.4195277 10.3804215 8.6016122 10.0012130 11.0130384 10.0223062 2.4723318 NA 8.3899518 6.2378639 13.4988525 9.2029691 8.8438881 1.7353489 9.0044590 9.4969147 5.7651104 7.9251883 7.9641820 11.6953654 5.1045967 7.5850294 TCGA-AG-4009 83 0 NA 426 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AG-4015 85 0 NA 0 rectum stage iia t3 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 46.49.0 3 4 3 NA 3 3 4 4 5 1 NA NA 7 0 0 0 0 0 0 0 0 4 0 0 0 0 7 7 0 0 0 0 0 0 0 0 4 0 0 0 7 2.70508e-06 7.282908e-07 7.807479 10.809046 12.555847 7.546952 9.317340 8.417316 2.769349 NA 10.356452 1.961994 7.703456 10.919091 9.903036 9.841051 9.743349 9.354306 0.0279540 0.0279540 -0.5104500 0.5502300 -0.5458000 0.4984400 0.5201800 -0.5144100 0.0238820 0.0132480 -1.1203000 -1.0413000 0.9756900 0.9756900 0.9756900 -0.5192500 0.0092054 0.0126900 0.0126900 -0.5524400 2.0447000 2.6374000 2.0718000 -0.1082500 -0.4720200 -0.4618200 -0.4340600 0.0069351 0.0373450 0.0507120 -0.4842800 -0.4842800 -0.4833100 -0.5137100 -0.5104500 -0.4512300 0.0427680 0.0201810 -0.5458000 -0.5230000 -0.5317200 -0.0068552 -1.0413000 -0.4710700 -0.5056400 -0.5056400 -0.5192500 -0.5192500 -0.0248520 0.0000000 -0.5319300 -0.5255500 -0.5016000 -0.5524400 0.3717100 1.6823000 -0.5460000 -0.1082500 0.503 0.008 0.000 0.000 -0.773 -0.219 0.000 -0.506 -0.519 0.000 0.000 -0.532 0.000 -0.502 -0.502 -0.086 0.466 0.000 0.000 1.310 2.072 -0.511 -0.546 0.000 0.000 0.000 0.000 -0.484 -0.484 -0.523 -0.523 0.000 0.000 1.070 0.000 -0.026 0.520 0.000 0.000 -0.108 0.503 0.008 0.000 0.000 -0.773 -0.219 0.000 -0.506 -0.519 0.000 0.000 -0.532 0.000 -0.502 -0.502 -0.086 0.466 0.000 0.000 1.310 2.072 -0.511 -0.546 0.000 0.000 0.000 0.000 -0.484 -0.484 -0.523 -0.523 0.000 0.000 1.070 0.000 -0.026 0.520 0.000 0.000 -0.108 6.620201 6.190808 2.283922 14.729977 9.567468 4.662428 6.769343 4.916185 10.088693 8.850732 6.091272 2.546956 9.708503 10.106647 12.225258 9.254310 10.973216 7.868879 9.326123 7.916185 3.421425 12.713533 1.961994 5.689909 7.028078 7.961989 9.81529843 11.39505257 12.83119708 9.79645986 7.57669899 9.65373236 6.68990994 4.66242770 12.87206936 12.79961675 9.72520127 12.67580491 6.86887934 12.55584675 6.68990994 8.31954071 -0.03800632 15.23727675 3.28392177 12.44202164 9.79487882 8.73996722 8.41731583 7.46183465 12.18024933 9.35430625 8.82926766 11.09705675 10.57945633 0.96199368 1.54695618 9.36073254 10.46780034 11.29737916 12.83946468 11.32228726 9.65198681 9.67966517 11.49429604 12.95439614 6.84463171 9.08869338 10.93137532 7.95634247 11.95209280 11.90303642 -0.03800632 7.80747858 10.92488486 10.80904620 8.52040968 8.27032803 8.49329227 14.72997718 9.01998068 8.47768866 11.16900317 7.45384184 8.58769765 11.02336002 10.36713033 8.90186186 14.37984134 8.68308795 9.48358928 10.63970844 9.75640471 7.61304021 7.27487197 12.13410376 8.89272616 11.95740267 10.81451830 10.89494172 8.28747414 9.13691449 10.58129174 8.67279516 12.32793665 1.96199368 8.95916823 9.86695448 8.86285553 8.20991632 12.91582151 8.31954071 5.45384348 8.39244151 7.68990924 9.76127048 9.20278011 8.78076284 7.89862678 8.56190156 3.13191868 NA 7.21937668 NA 9.44378834 5.48554919 11.40855526 8.80433918 10.01591468 8.69669843 -0.03800632 10.86059018 12.66394501 9.76773275 10.35645153 9.98851229 10.24275957 8.93640356 4.42141856 9.62198463 11.06308467 NA 7.26576974 13.64113900 9.96611102 9.69669843 7.08092942 5.63441321 12.23753139 10.50791859 10.78853727 11.10026061 9.84105133 11.57945629 10.77897246 8.29290550 9.98316321 11.71060099 9.74334851 1.54695618 1.96199368 9.05202184 3.96198442 13.20635266 8.87487810 7.89862678 -0.03800632 8.72134429 9.08869338 5.38825499 7.50114771 7.95067370 11.78814004 4.96198905 7.46183465 TCGA-AG-4021 84 0 NA 0 rectum stage iv t3 n2 m1 25-9-2014 female 2005 NA NA rectal adenocarcinoma yes r2 5 NA NA 122.34.0 NA NA 1 3 1 1 1 1 3 1 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.781165 11.583808 12.640281 7.245356 9.245356 11.093303 2.660404 -1.427013 11.448104 2.660404 8.424679 10.300425 10.566222 10.032823 10.180723 11.051953 0.0129340 0.0431570 -0.7403700 3.6108000 -0.8060000 -0.8056700 1.3031000 0.0023581 0.0000000 0.0000000 -0.7997800 0.3349600 3.6569000 3.6569000 -0.1517000 0.0043021 -0.0102050 -0.0810730 -0.0810730 -0.0682610 -0.0048461 -0.0048461 -0.0048461 0.7087000 -0.0083005 0.0112610 -0.6525800 -0.0026322 0.0264280 0.0295930 0.0317330 0.0317330 -0.8100500 -0.6888800 -0.7403700 -0.6643900 0.0279190 0.0193630 -0.8060000 0.0023581 -0.7941900 0.0048579 -0.7997800 0.0114000 0.0144700 0.0087731 0.0043021 0.0043021 -0.0102050 0.0158660 -0.8275700 -0.7915100 -0.7945300 -0.0682610 -0.0048461 0.6492800 -0.8388900 0.7087000 0.000 0.000 0.000 0.000 -0.724 -0.724 -0.151 0.000 0.000 0.000 0.000 -0.828 -0.828 -0.789 -0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.649 -0.839 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.689 -0.689 2.992 3.657 0.000 0.000 0.497 1.303 -0.782 0.000 -0.391 0.000 0.000 0.000 0.000 -0.724 -0.724 -0.151 0.000 0.000 0.000 0.000 -0.828 -0.828 -0.789 -0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.649 -0.839 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.689 -0.689 2.992 3.657 0.000 0.000 0.497 1.303 -0.782 0.000 -0.391 7.6443928 6.2594307 4.6173220 15.7636322 9.9748764 3.5271204 10.5322078 -0.4270133 9.5132438 8.7540824 5.8017484 2.0323477 9.7975349 10.8982357 11.5769751 9.9172262 11.4042375 9.2524105 8.7981377 10.2524103 5.2022884 11.3257290 -1.4270133 9.1569532 7.4026531 8.3722117 9.9865581 9.6650267 11.0091212 9.1839551 8.4722871 10.2995741 7.1159623 4.3802862 12.6431351 13.4600556 9.7615192 13.1391627 6.7277490 12.6402806 7.6227788 9.3353122 0.5728897 13.9628304 3.5271204 12.0475235 9.6983437 9.5911303 11.0933034 8.8137216 12.5068975 8.6063534 8.9673929 12.4981138 11.1458673 1.1578845 -0.4270133 10.4042375 10.4475274 11.9736763 12.0315932 11.3089093 7.2974436 8.4707756 11.3841042 13.7624846 7.3835021 9.4089806 10.6039421 8.6735925 12.007949 11.068535 2.742847 8.781165 12.192921 11.583808 9.264674 9.645063 9.434793 15.763632 8.042572 7.633626 9.999719 8.142786 8.450981 10.760282 12.211253 10.230195 14.627344 9.086658 9.869846 9.488810 10.022079 7.958793 3.858329 11.793913 9.784819 9.676874 10.342768 10.530395 8.594896 9.633626 11.412725 10.566576 12.474729 NA 9.320284 8.252410 9.795725 7.415280 11.932268 9.335312 5.467749 9.125599 9.921658 9.362464 10.889777 8.842279 6.527127 9.534380 1.572938 NA 7.172844 NA 8.383502 5.830319 11.321752 8.851380 9.912224 9.888646 2.479826 10.515445 13.745241 8.827959 11.448104 10.177483 10.037476 9.550210 3.999197 9.720771 9.881286 -1.427013 4.430914 12.685614 10.133741 9.415281 7.300850 5.681455 12.692844 11.101873 11.157423 11.075265 10.032823 11.809991 10.224879 8.185799 10.769840 11.181185 10.180723 NA 2.380286 8.156991 4.782382 14.094163 9.567991 9.636325 -1.427013 8.578555 9.408981 NA 7.681455 7.300850 12.225775 3.965249 7.076756 TCGA-AG-4022 59 0 NA 30 rectum stage ii t3 n0 m0 25-9-2014 female 2006 NA NA rectal adenocarcinoma yes r0 0 NA NA 122.34.0 NA NA 2 1 2 5 1 2 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8550846 10.9315635 12.1896344 8.4322178 7.8728878 10.4989961 4.8230411 0.4079509 11.4047103 3.7772303 8.1849829 10.3053428 10.2414187 10.0142278 10.3352856 11.3246274 0.00152550 -0.02584400 -0.04048000 0.31494000 0.57403000 0.57403000 0.60521000 -0.01381500 -0.01945200 -0.01161100 0.41011000 -0.00567570 2.46640000 2.46640000 2.41800000 0.00291330 0.44596000 0.00081515 0.00081515 1.44550000 2.33700000 2.33700000 2.38570000 0.17106000 0.02679500 -0.00889900 0.00152550 0.20886000 -0.01395300 -0.01395300 0.15711000 0.00000000 -0.06504500 -0.04048000 -0.04048000 0.34958000 0.32543000 1.13620000 0.57523000 -0.01381500 -0.01381500 -0.03732200 -0.00567570 -0.00567570 -0.04428000 -0.05405400 -0.00571220 0.00291330 0.44596000 0.44596000 0.00081515 -0.62684000 -0.62684000 0.03298600 -0.67104000 -0.08213700 0.01460900 0.17106000 0.000 0.000 0.000 0.000 0.000 0.000 2.418 0.000 0.000 0.446 0.446 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.000 -0.680 1.657 0.000 0.000 0.209 0.209 0.000 0.000 0.148 0.000 0.000 0.000 0.315 0.315 1.136 1.136 0.545 0.545 0.000 0.000 0.171 0.000 0.000 0.000 0.000 0.000 0.000 2.418 0.000 0.000 0.446 0.446 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.000 -0.680 1.657 0.000 0.000 0.209 0.209 0.000 0.000 0.148 0.000 0.000 0.000 0.315 0.315 1.136 1.136 0.545 0.545 0.000 0.000 0.171 7.921071 6.265983 4.655930 14.852498 9.546700 4.729928 7.926327 1.144960 10.242473 9.299785 6.967698 5.392894 9.329843 10.675178 12.424462 10.592050 10.864014 9.560286 9.214283 8.300797 5.144968 12.308239 2.408005 4.523480 7.434064 8.191545 9.932870 11.099745 12.369089 9.333803 7.346601 10.161775 6.314892 6.153955 11.921071 12.928456 9.977224 12.930746 6.794181 12.189634 6.997964 9.597826 2.910502 13.382356 5.577927 11.620498 10.299279 10.522178 10.498996 8.316894 13.588843 9.574583 8.614202 10.028221 10.518267 1.630405 3.282469 9.913813 9.725414 12.034015 13.304145 10.742647 7.936964 9.658300 12.406592 12.815358 7.061444 10.161775 11.202147 8.457850 11.5047167 10.8894646 2.6304055 8.8550846 11.8445396 10.9315635 9.5364256 9.2398365 9.7374241 14.8524981 8.7830408 8.1871739 9.8166851 9.0697795 8.9892020 10.4994369 11.3737858 8.4143745 13.8776009 9.1849827 9.2597506 9.5182672 10.2045819 6.6174542 7.0757048 11.2453667 10.6716620 10.0269988 9.7559920 9.6027584 9.0436228 9.2482549 11.4704974 10.2685712 11.9071116 NA 8.8837350 8.7178567 10.1119051 8.8550846 12.4635099 9.5978261 6.8060327 8.9184360 9.5286713 9.4514846 10.3063510 8.6368203 6.9523219 10.1827886 NA -1.1769029 9.1176597 -1.1769029 9.3776279 5.0324932 10.9351527 9.3426752 10.2498279 10.3328140 NA 10.0409966 13.7556690 9.7750522 11.4047103 10.7537763 9.6166424 8.8286636 6.6432184 11.3578282 10.0949164 1.6304055 6.6559285 12.5243455 10.6547421 10.5594410 7.2451039 6.9263268 13.1238920 10.9753239 11.0500532 10.9571444 10.0142278 11.2364025 9.6150158 8.5661903 10.6133875 10.2419457 10.3352856 4.4668946 NA 7.1524319 4.7772356 13.8403259 10.0269988 9.2334903 0.4079509 8.6844516 10.1617753 2.2824695 8.6779074 7.9548960 12.0515571 4.7537757 7.9184363 TCGA-AG-A002 35 0 NA 638 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 3 1 NA 3 5 4 3 5 3 NA NA 7 0 7 4 0 0 4 0 4 0 4 0 0 1 0 7 0 0 7 4 0 0 4 0 0 0 0 1 0 0.0001990315 4.720018e-05 9.6984262 11.1440730 11.6694645 7.6964126 9.3027093 10.1284762 1.2125693 NA 10.2252213 0.2126316 8.3825220 10.2907476 11.2699116 10.1203137 10.0705778 11.0860409 0.00944910 0.00738040 -0.00496770 0.01223700 0.00889200 0.00889200 0.00332990 0.01153900 -0.00304750 -0.00304750 0.01126100 0.01126100 0.00472810 0.00472810 0.00472810 0.01070300 -0.00664320 0.01782400 0.01782400 -0.04278800 0.00972760 0.00972760 0.00972760 0.06007900 0.00944910 0.00944910 0.00944910 -0.00384290 -0.00273470 0.02020300 -0.00559460 0.02384700 -0.01064600 0.00000000 -0.00496770 0.01223700 0.00485790 0.00055933 -0.11555000 -0.00184910 -0.00166290 -0.01333800 0.01126100 0.01126100 0.01153900 -0.02575600 0.01070300 0.01070300 -0.00664320 -0.00664320 0.01782400 -0.00456950 -0.00456950 -0.04278800 0.00972760 -0.02406000 -0.01298900 -0.00908020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.212600 4.967482 3.019951 16.304616 10.185577 6.655541 9.061220 1.797553 7.289412 9.493368 3.797563 NA 9.570149 10.794739 12.690608 9.530009 10.776746 10.376246 8.407354 2.534535 2.212600 11.267879 NA 2.212600 8.166793 7.019952 8.902595 10.348306 13.100198 9.414721 8.684272 9.747872 7.451002 3.019951 6.256992 12.797794 10.029580 13.218572 7.980781 11.669465 3.212600 10.125486 NA 13.355183 6.045487 11.825926 10.398711 9.807798 10.128476 6.856453 12.020757 9.407354 10.554671 14.087098 10.936258 NA NA 9.854649 10.422050 11.835106 11.762863 10.913903 7.933696 8.819927 11.335412 13.325036 7.525480 9.755629 10.854648 7.849221 12.2034099 10.8982217 NA 9.6984262 11.7594913 11.1440730 8.2405028 8.2069504 8.5745405 16.3046156 6.8273071 7.8636486 10.6565764 7.4887215 9.2920816 11.3693119 11.4183901 9.7951528 14.0064033 9.1638816 9.8401307 9.4770394 9.8309822 8.6006139 2.5345348 10.7114460 9.3949912 7.0327753 10.2041186 10.2542559 9.1401081 8.7084518 11.2860690 10.6730527 12.6683709 3.3825151 8.1841404 8.7326260 11.1891609 8.5876361 14.5153785 10.1254862 9.3185053 7.3000596 5.7044487 8.7361587 10.6974196 8.7825285 7.3211209 9.9972316 NA 4.8564529 6.4024220 0.2126316 7.3000596 5.2125966 11.3341303 9.6923770 9.9791258 11.0752342 NA 10.6166739 12.9460359 10.5311396 10.2252213 11.0798755 10.1551113 9.4171679 5.7671860 10.8125096 10.7614572 NA 2.7975526 12.2648252 10.3837611 10.4183901 8.6332307 6.1898759 12.0399395 10.9574306 10.6038404 10.5513332 10.1203137 12.1602337 10.5854618 8.1667933 10.3843991 11.2780129 10.0705778 NA 2.7975526 8.1331879 NA 13.8754877 10.7420274 9.5003091 NA 10.0725819 9.7556285 5.3000578 8.9674842 8.1609640 12.3803285 3.3825151 3.3825151 TCGA-AG-A008 50 0 NA 424 rectum stage i t2 n0 m0 25-9-2014 female 2009 NA NA rectal mucinous adenocarcinoma yes r0 0 NA NA 43.42.0 1 3 1 NA 3 3 4 3 5 3 NA NA 7 0 0 4 4 0 0 0 0 0 0 4 0 0 0 7 0 0 0 4 4 0 0 0 0 0 4 0 0 1.35254e-06 3.468052e-07 9.2978788 10.6254979 11.9524157 7.8305849 9.3565442 9.8847408 3.1222420 NA 10.1366591 0.3148705 7.9515097 11.0031354 9.7348452 9.5676688 10.2617914 12.1294676 0.01105300 0.01105300 0.04131700 -0.50784000 0.00930980 0.00930980 0.00930980 -0.53794000 -0.54804000 -0.54804000 0.04755200 0.04755200 0.06451100 0.06451100 0.06451100 -0.56694000 0.06350900 -0.52379000 -0.52379000 -0.00539920 0.69933000 0.69933000 0.68542000 -0.23104000 -1.08490000 0.05523000 0.01105300 0.00000000 0.05650500 0.05222900 -0.53236000 -0.53236000 -0.53747000 0.04131700 0.04131700 -0.50277000 -0.51391000 -0.54703000 0.00930980 -0.53794000 -0.53794000 -0.54804000 0.04755200 0.04755200 0.05694000 0.04317500 -0.56694000 -0.56694000 0.06350900 0.06350900 -0.52379000 -1.07680000 -1.07680000 -0.00539920 -1.11000000 -0.00018421 0.04372300 -0.23104000 -0.538 -0.538 -0.548 -0.548 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.524 -0.524 -1.077 -1.077 0.000 0.000 0.000 0.000 -0.518 0.167 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.532 0.000 0.000 -0.508 -0.508 -0.547 -0.547 0.000 0.000 0.000 0.000 -0.231 -0.538 -0.538 -0.548 -0.548 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.524 -0.524 -1.077 -1.077 0.000 0.000 0.000 0.000 -0.518 0.167 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.532 0.000 0.000 -0.508 -0.508 -0.547 -0.547 0.000 0.000 0.000 0.000 -0.231 5.7743179 3.1222420 NA 14.6711445 9.6209469 5.3592787 9.0764364 12.0402514 10.6198068 10.0342739 4.2217766 2.3148995 9.4848102 11.0987019 12.3596207 9.3427912 11.0747733 9.7784095 8.2632523 0.3148705 3.3148850 10.8433392 2.8998523 7.4747564 6.7743166 8.2978788 9.7804515 10.5968152 11.4493114 9.4898108 8.1027878 10.5096420 7.6002876 2.6368218 11.8951437 13.1048263 8.9908423 12.9737660 7.3230899 11.9524157 2.6368218 8.2806696 NA 14.3112703 5.1728675 12.5373782 9.7327376 10.3975265 9.8847408 6.5047094 12.3240139 9.8345215 9.1697534 13.0563521 10.8256493 0.3148705 NA 10.5388868 10.6975091 10.7875760 12.5758047 10.9926047 9.1295316 8.5194562 11.4415573 13.1521188 6.7906183 10.1254567 10.5781543 8.2806696 12.1302684 10.8790346 NA 9.2978788 11.3106523 10.6254979 9.3064069 8.1027878 8.8617795 14.6711445 8.5145574 8.7702123 11.0655921 9.0929622 9.1125466 11.1141668 10.9506033 9.3844960 14.4652671 8.5047098 8.4747564 11.0256915 10.2232777 7.8462664 1.8998330 11.9268320 10.1302685 10.0847230 10.3289056 10.3400247 7.4093324 9.3372530 11.3365592 10.1525130 12.7149000 -1.2845459 8.7824908 9.3654412 11.0256915 9.4722321 13.2421075 8.2806696 9.4441682 6.9295946 6.2690818 10.0393990 10.1572355 10.3657133 5.5628133 7.8147311 NA NA 6.5437031 0.3148705 10.0187887 4.4848084 11.5910096 8.8187109 10.1867904 10.8057360 NA 10.9623435 13.9995242 9.5556764 10.1366591 10.4247158 10.3592792 8.5532898 4.1222420 11.4480273 10.7619787 NA 2.6368218 13.0859619 10.5425011 10.3620090 8.3681052 6.4848100 12.7138960 10.0647546 10.4364186 10.8226797 9.5676688 12.6740856 11.0179235 8.4390064 12.5167027 11.4972795 10.2617914 NA 2.8998523 9.1587748 6.6368131 13.4639971 9.5388867 9.2367260 1.3148705 8.9110749 10.1254567 3.3148850 8.8187109 7.2921652 11.8452915 4.4848084 7.0291304 TCGA-AG-A00C 49 0 NA 183 rectum stage iiib t3 n1 m0 25-9-2014 female 2007 NA NA rectal adenocarcinoma yes r0 1 NA NA 43.42.0 1 3 2 NA 3 3 4 3 3 2 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 1.768706e-06 5.895688e-07 8.765511 10.933254 12.608866 8.715586 9.327390 9.707946 3.887769 NA 10.014987 NA 7.715586 11.238264 9.563018 9.118277 9.958156 11.083508 0.0151680 0.0297640 -0.1582200 0.0000000 -0.0232270 0.0037465 0.0625080 -0.9716000 0.0081959 -0.0083005 -0.2106500 -0.1571800 1.1173000 1.1173000 1.0925000 -0.0116110 0.0783330 0.0597940 0.0597940 0.0186630 1.2490000 1.2353000 1.2353000 -0.0287650 0.0013830 0.0013830 0.0151680 -0.0048461 -0.9717400 0.0255310 -0.0553640 -1.0282000 -0.0477800 0.0118180 -0.1582200 0.0000000 0.0000000 0.0788710 -0.0552860 -0.9477300 -0.0018014 -0.0136540 -0.2106500 -0.0748110 -0.9938100 -0.9938100 -0.0116110 -0.0116110 0.0783330 0.1101300 -1.0224000 -1.0134000 -0.9926300 0.0181030 1.2490000 0.0065262 0.0020805 -0.1340500 0.000 0.000 0.000 0.000 0.000 0.000 1.117 -0.994 0.000 0.000 0.000 -1.004 0.000 -1.021 -1.021 0.000 0.000 0.000 0.000 1.235 1.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.117 -0.994 0.000 0.000 0.000 -1.004 0.000 -1.021 -1.021 0.000 0.000 0.000 0.000 1.235 1.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.8512418 3.8877689 0.5657921 15.7728326 9.8832515 5.0252725 9.4727294 7.0087827 9.8090129 10.1951955 4.8137658 2.5658409 9.2903527 10.6730559 12.2338374 9.4207072 11.2575824 9.2903527 8.0972205 1.5658409 2.5658409 11.1842244 NA 5.8137658 6.9056891 7.3602545 9.2240504 10.7041106 12.0746240 9.1951955 8.1582961 10.0435971 6.3207266 5.0252725 13.1413781 12.9871148 9.6533017 12.6150067 6.8147158 12.6088661 4.1508034 7.1049981 2.5658409 12.0278298 4.6533008 13.1223449 10.4331176 9.8232266 9.7079459 5.4727282 12.1498618 9.0415724 8.7053901 12.8532627 10.5431187 0.5657921 0.5657921 9.6951218 10.2042748 11.1146607 13.1139383 10.9941990 8.7652659 8.9012292 10.9773392 13.0136969 6.8137658 9.3699698 9.9688509 8.7104972 11.3529252 11.3748030 0.5657921 8.7655112 11.2060838 10.9332536 8.6691267 8.4727294 8.9054216 15.7728326 8.7556634 8.1878904 10.7104971 7.7752922 8.8558577 10.9879036 10.8967557 9.1066255 14.3425803 9.2024635 9.2417959 10.2505875 9.7282302 8.7002653 5.9581560 11.7898405 9.9452172 10.8593105 10.0211661 10.1356944 8.7357638 9.7307457 10.6886669 8.9012292 12.7262461 NA 9.1394861 7.9579842 10.4284762 7.8042433 12.8639014 7.1049981 5.2096951 7.9667183 6.4238202 9.6020125 8.8832515 8.4694196 7.2382643 8.4423559 2.8877592 NA 7.9495431 NA 8.6743632 5.0894007 12.0303846 8.0087821 9.4545820 9.2311749 3.1508034 10.9134602 13.9202260 9.7531908 10.0149875 10.3521084 9.6184070 8.3340234 4.1508034 10.8149523 10.9210578 NA 6.1508013 12.9425069 10.4468763 10.1860586 7.9836914 5.1508034 13.6419864 11.3594422 11.0025504 10.3570018 9.1182774 12.2967335 11.3165458 8.7357638 10.1338900 11.1906343 9.9581562 2.5658409 0.5657921 7.4550691 6.7946576 13.5388186 9.2766453 8.1731689 NA 8.7195428 9.3699698 NA 7.9495431 7.2382643 11.4583816 4.8137658 2.8877592 TCGA-AG-A00H 75 0 NA 790 rectum stage iia t3 n0 m0 25-9-2014 male 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 3 2 NA 2 5 4 4 NA NA NA NA 6 0 0 0 4 0 0 0 0 4 0 0 0 0 0 6 7 0 0 0 4 0 0 0 4 0 0 0 0 1.838067e-06 7.629713e-07 9.326494 10.348153 11.987799 7.279673 8.731800 9.782173 1.109762 NA 10.495610 4.864637 7.760800 10.795373 10.018140 9.449175 9.316762 8.016638 -0.235940 -0.235940 0.106580 0.085012 -0.689880 -0.130050 0.245400 -0.247520 0.103220 0.108770 0.041317 0.041317 1.294400 1.294400 1.263000 -0.630950 0.074121 -0.238750 -0.238750 -0.042381 1.485100 1.472300 1.472300 -0.104470 -0.239600 -0.239600 -0.235940 -0.246420 0.042809 0.042809 -0.629880 -0.607670 -0.607670 0.106580 0.106580 0.085012 0.082348 0.143550 -0.689880 -0.249770 -0.247520 0.108770 0.041317 0.041317 -0.609310 -0.614700 -0.614120 -0.614120 0.074121 0.074121 -0.628650 -0.619490 -0.619490 -0.042381 1.485100 0.081899 -0.137810 -0.104470 -0.250 -0.250 0.109 0.109 0.000 0.000 1.294 -0.616 -0.614 0.000 0.000 -0.616 -0.239 -0.619 -0.619 0.000 0.000 -0.236 -0.236 1.485 1.485 0.000 -0.138 -0.246 -0.246 0.000 0.000 -0.608 -0.608 0.107 0.107 0.000 0.000 0.147 0.147 -0.674 0.245 0.000 0.000 0.000 -0.250 -0.250 0.109 0.109 0.000 0.000 1.294 -0.616 -0.614 0.000 0.000 -0.616 -0.239 -0.619 -0.619 0.000 0.000 -0.236 -0.236 1.485 1.485 0.000 -0.138 -0.246 -0.246 0.000 0.000 -0.608 -0.608 0.107 0.107 0.000 0.000 0.147 0.147 -0.674 0.245 0.000 0.000 0.000 6.413528 6.395150 3.431676 15.816399 9.348153 5.319202 8.376534 4.109745 10.120975 8.328916 4.109745 2.109762 9.894383 10.500992 11.927931 9.639178 11.109043 9.525490 8.717078 9.055192 5.664338 12.846573 NA 6.175838 5.917102 6.837668 9.1677395 11.0449129 12.4747033 9.3951500 7.5106273 10.0241331 6.7244579 3.1097450 12.3603424 12.8319150 9.3481527 12.5511359 6.7096601 11.9877988 5.9677289 9.7226163 0.1096949 14.6892995 3.1097450 12.1738170 10.2871674 9.9692826 9.7821733 8.7317996 11.8550020 8.9426380 8.5191389 10.5588965 10.1838893 1.1097617 2.6947019 9.2721392 9.8427631 10.1321156 12.4893970 10.8828871 8.6909485 9.1623160 11.3167439 12.8937692 6.5020648 8.8712991 10.3928362 7.4406649 11.596583 11.552173 1.109762 9.326494 11.328311 10.348153 8.847840 8.165030 8.864569 15.816399 8.181210 8.299573 10.687177 8.983192 8.548540 11.154142 10.751800 8.399306 14.339092 9.132116 9.617543 11.058845 10.025627 7.897651 3.569175 11.892337 10.685287 10.747278 10.283425 9.542290 8.883843 9.673897 10.936296 8.933115 12.746440 3.279679 9.326494 9.063595 10.398614 7.395150 12.323156 9.722616 6.724458 9.629384 8.877932 10.036044 9.092742 8.324067 7.633310 8.480435 NA NA 7.609594 NA 9.499917 5.724457 12.090601 8.371843 9.650844 9.548540 1.694702 11.157553 13.716153 10.148667 10.495610 10.220884 10.082728 8.569180 6.502065 10.095590 10.719471 NA 3.279679 12.537061 9.203007 10.227391 7.584346 5.664338 12.739787 10.733629 10.730884 11.631839 9.449175 12.373897 11.224792 8.440665 9.595879 11.819693 9.316762 NA 1.109762 7.189553 4.279672 13.901318 9.031589 8.502065 NA 8.735457 8.871299 NA 7.249299 7.299573 11.181881 3.431676 7.249299 TCGA-AG-A00Y 68 0 NA 700 rectum stage iia t3 n0 m0 25-9-2014 male 2008 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 3 2 NA 3 3 4 4 NA NA NA NA 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 4 0 0 0 0 0 0 0 4 5.306119e-06 3.017205e-06 7.456510 11.005769 11.931163 8.272086 9.751254 8.979236 3.035043 NA 9.922920 1.812663 7.513094 10.996703 9.643434 9.049530 9.889470 11.904531 0.4265400 3.2561000 -0.1982500 0.0984150 -0.8497900 2.1336000 0.5654300 -0.0855900 0.0291840 0.0791590 -0.0608830 -0.0850590 2.0988000 2.0988000 2.3590000 -0.7480300 0.0987060 -0.0346310 -0.0674580 0.0172640 1.0126000 1.0126000 0.9639100 0.0132130 -0.7060300 -0.7060300 -0.6948600 -0.0411650 0.1146200 0.0282000 -0.7529700 -0.7462100 -0.1098500 -0.1818100 -0.1982500 0.0843540 0.0670880 0.0059700 -0.8791400 -0.1051300 -0.0752110 0.0593460 -0.0608830 -0.0832000 -0.2461800 -0.2083400 -0.7410400 -0.7223400 0.0987060 0.0857990 -0.7560700 -0.7702200 -0.8273000 0.0172640 0.8940700 -0.0071769 -0.5182500 -0.0400730 0.000 0.000 0.000 0.000 0.000 0.000 -0.198 -0.200 -1.293 0.000 0.000 -0.721 0.000 -1.293 -1.293 0.000 0.000 -1.293 -1.293 0.964 0.964 0.000 0.129 0.000 0.000 0.000 0.000 -1.293 -1.293 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.850 -0.146 0.000 0.000 -1.293 0.000 0.000 0.000 0.000 0.000 0.000 -0.198 -0.200 -1.293 0.000 0.000 -0.721 0.000 -1.293 -1.293 0.000 0.000 -1.293 -1.293 0.964 0.964 0.000 0.129 0.000 0.000 0.000 0.000 -1.293 -1.293 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.850 -0.146 0.000 0.000 -1.293 6.5852435 5.9825807 2.2276795 14.4034934 9.4779905 4.4756167 8.9350513 6.6706350 10.2624909 8.9657843 5.6200086 3.0350432 9.7335037 10.4625094 12.4239868 10.1210997 11.3322908 9.5852441 8.9892432 5.8424006 3.5496199 10.2206303 0.2277411 7.0605825 5.2276910 6.6539571 9.8606872 11.3250658 11.9509263 10.5484926 8.1225097 10.1405813 6.9958768 5.6539571 13.2848376 12.7468368 9.0763148 12.6547429 7.2720857 11.9311631 5.5130927 7.7354870 2.8126625 14.4696752 2.8126625 11.8243477 10.3257241 10.0558285 8.9792360 7.6539571 12.0414732 10.0318230 8.9453683 12.8789680 11.1635937 3.2276949 0.2277411 9.7013978 10.6830192 11.0285919 12.5510283 10.9393590 9.3875633 8.8424019 11.4346026 13.1112899 6.6539571 8.8751503 10.7315178 7.1934761 12.1851569 11.5291882 NA 7.4565105 11.2768599 11.0057692 8.9725258 8.1042087 8.8606509 14.4034934 8.6370831 8.9246596 11.1869695 8.5451046 8.9036490 11.7115078 10.0382636 9.1335304 14.2817027 7.8201490 10.0106902 11.1026734 9.9089304 8.6789033 7.5675424 12.0302084 10.5675420 11.5714329 10.1992355 10.5686548 7.5852442 9.7590734 10.7315178 9.6200094 12.6512072 5.0846766 9.7937460 9.6687480 10.5084628 7.8350221 13.2038981 7.7354870 7.1584289 7.6706357 6.8859038 10.0302083 9.5630824 8.9958762 7.8859038 8.7394448 0.2277411 NA 8.5360311 NA 9.4850798 5.7512548 12.0852843 8.1345824 10.1405813 9.1194758 1.2276795 11.4480703 13.5033801 9.7034255 9.9229203 10.6027314 9.5360311 8.9176901 4.0350432 9.8515735 11.4078685 NA 7.6455446 13.1696566 9.2019345 10.2291002 7.4423995 5.7512548 12.1278041 10.1687397 10.5972893 11.1977979 9.0495298 12.7290317 11.4862581 8.5405748 10.1109005 12.1190960 9.8894702 2.8126625 2.8126625 7.6306188 8.0285918 13.1900458 8.9487912 8.6664839 0.2277411 8.9512506 8.8751503 NA 7.1702065 6.5130943 11.6140934 3.8126522 6.9281322 TCGA-AG-A011 80 0 NA 1126 rectum stage iia t3 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 6 1 NA 3 2 4 3 5 3 NA NA 7 0 4 0 0 0 0 0 0 0 7 4 0 0 4 7 0 0 4 0 0 0 0 0 0 0 4 0 4 1.248499e-06 1.734026e-07 9.6758833 11.4490547 12.5619420 8.2644571 8.7824885 10.1283955 2.6206099 0.2986583 10.5310937 1.2986583 7.4983450 10.8484574 8.9133825 9.6407474 9.8124004 11.0510534 7.8196e-01 -6.7674e-01 -8.0244e-03 -6.8560e-01 -6.9708e-01 -6.9708e-01 1.5794e+00 -6.9688e-01 -6.3472e-01 4.0243e-03 3.3690e-02 -1.8392e-02 8.3215e-01 8.3215e-01 -4.5228e-02 -6.7095e-01 2.3706e-02 5.6944e-02 5.8509e-02 6.2205e-02 7.9297e-01 7.9297e-01 7.9840e-01 -2.4114e-02 2.4268e-02 2.4268e-02 9.4491e-03 -2.3018e-02 -1.2473e-03 -1.1413e-02 -8.5995e-05 -1.2162e-02 6.7511e-01 -8.0244e-03 -8.0244e-03 -6.8250e-01 -6.8560e-01 1.5587e-02 -6.3690e-03 2.0805e-03 -6.8469e-01 4.0243e-03 3.3690e-02 6.9435e-03 1.3353e-02 1.4190e-02 -6.7095e-01 -6.7095e-01 2.3706e-02 2.0063e-02 -6.7490e-01 -6.8761e-01 -6.8761e-01 9.2315e-02 7.9297e-01 7.3258e-01 5.3806e-02 -4.9128e-02 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 -0.650 0.000 -0.688 -0.688 0.000 -0.665 0.000 0.000 0.793 0.793 0.791 0.000 0.000 0.000 0.000 0.000 0.630 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 -0.670 1.503 0.000 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 -0.650 0.000 -0.688 -0.688 0.000 -0.665 0.000 0.000 0.793 0.793 0.791 0.000 0.000 0.000 0.000 0.000 0.630 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 -0.670 1.503 0.000 0.000 0.000 6.806467 5.546601 3.106030 15.107323 10.133144 8.556061 8.337592 4.205565 9.892997 9.814373 5.106026 2.620610 10.248499 10.776431 11.534687 9.223485 10.778453 9.208566 7.375489 8.960451 4.883635 10.564288 NA 6.275953 6.620601 6.026594 10.214552 10.698485 12.222743 9.476092 6.913383 10.498345 6.868529 6.181315 12.381820 13.322254 8.953309 12.867816 5.427955 12.561942 5.298673 8.778453 2.298658 14.155196 5.053559 12.173654 9.616085 9.926207 10.128395 7.949725 12.465777 9.588692 9.144163 13.459332 10.356664 1.883621 2.620610 10.953309 11.124427 11.426667 13.203307 11.209315 6.205563 9.232363 11.107613 13.227931 6.508126 8.928029 10.333472 7.920724 12.1492503 10.6251022 NA 9.6758833 11.5531109 11.4490547 8.9533089 8.3320956 9.1628588 15.1073233 8.6385228 8.4433311 9.8647267 8.2470398 7.9781527 11.3940698 10.8290791 8.1905778 14.2633746 9.1597596 8.7744062 9.6001690 9.8704254 6.5081259 7.5274911 11.5944417 10.4983451 9.4356638 9.7374645 9.6407474 9.9986615 9.7353842 11.1805514 9.5724683 12.4951949 NA 9.0401398 8.3255281 10.8580499 9.2644571 12.5680917 8.7784530 8.1934904 7.8532615 8.7703481 10.0129182 10.0882064 10.2046313 6.8836355 7.6649947 0.2986583 NA 7.8300544 1.2986583 9.2499575 6.0535610 12.1449467 8.4585440 10.4785819 9.7945278 2.8836404 11.1972741 13.3449441 9.9479290 10.5310937 9.7703479 9.7885206 8.3430667 4.5465982 10.3471596 10.4005171 1.2986583 7.2986730 12.0709873 9.0502168 9.8143726 7.6759697 5.4279547 13.2535960 11.2809534 11.1244266 10.6273477 9.6407474 12.5078214 11.3986780 7.9991127 9.8742120 11.6617124 9.8124004 3.2986730 0.2986583 8.0111311 6.8532621 12.7897742 9.5771221 9.6047345 NA 8.9207244 8.9280294 NA 7.1566535 6.7905257 11.3231199 3.9991161 5.7581033 TCGA-AG-A014 86 0 NA 485 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 3 3 4 NA 2 2 4 4 NA NA NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 4 1.109776e-06 3.814857e-07 8.640050 11.084591 12.871992 7.911011 8.031042 10.087509 5.458152 NA 10.083130 3.595659 7.467141 11.733345 9.845308 9.210365 9.572936 11.454767 0.00500490 0.00500490 3.65690000 -0.01604500 1.80030000 1.80030000 1.79270000 1.39150000 -0.01793300 -0.04373000 3.63930000 3.63930000 3.65690000 3.65690000 3.65690000 -0.02602200 1.07570000 0.67679000 0.67679000 -0.66864000 2.73090000 2.73090000 2.73090000 0.31162000 0.00319900 0.00319900 0.00319900 0.03093600 -0.01830800 0.00083995 -0.02006400 -0.02006400 -0.03857000 -0.04671100 -0.02615900 -0.01604500 -0.06959200 1.35310000 -0.68305000 1.31080000 -0.02340700 -0.04373000 3.63930000 -0.62178000 0.27901000 0.27901000 -0.02602200 -0.02602200 1.07570000 1.07570000 -0.67856000 -0.66522000 -0.66522000 -0.66864000 -0.04847000 -0.05346800 -0.02301000 0.31162000 1.311 0.000 0.000 0.000 3.011 -0.628 3.657 0.279 0.000 1.076 1.076 -0.679 0.677 -0.678 -0.678 0.570 0.570 0.000 0.000 2.731 2.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.353 1.353 -0.686 1.107 -0.164 -0.164 0.255 1.311 0.000 0.000 0.000 3.011 -0.628 3.657 0.279 0.000 1.076 1.076 -0.679 0.677 -0.678 -0.678 0.570 0.570 0.000 0.000 2.731 2.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.353 1.353 -0.686 1.107 -0.164 -0.164 0.255 5.3061492 6.1806173 1.1361914 14.5581922 10.3223383 4.0431170 7.6200402 1.1361914 7.2236870 9.0461172 4.9435791 1.1361914 9.0728620 10.3198594 11.8700868 9.7582759 9.7249388 10.5434918 8.9532076 8.2655072 2.1362242 11.9714850 0.1361914 3.8366614 2.4581457 5.1806173 8.991092 11.393022 12.479132 9.213040 8.393612 10.110639 6.113505 3.943574 12.549588 12.933480 9.750934 12.469100 6.628077 12.871992 3.136224 8.453637 2.943584 13.920245 4.721187 12.592065 9.215709 10.646326 10.087509 6.930640 11.128454 9.249966 8.864145 11.414093 10.304896 1.721198 1.136191 9.223687 10.134815 10.759191 12.285336 10.344458 8.426243 9.308652 11.453586 12.387706 6.528542 10.425090 10.283429 8.213040 12.3102134 12.1245537 NA 8.6400497 11.2960954 11.0845913 8.2395117 7.1020082 8.7211491 14.5581922 8.7174245 8.9879731 11.1935389 8.3456776 8.4716143 11.9241266 9.1668912 9.2360453 14.2911213 8.8227247 9.4422858 11.8526149 9.8743164 8.9691139 5.1362242 11.0926002 10.6190320 11.9052354 10.2847007 10.7655807 7.8157041 9.8051091 10.1792514 9.7582759 12.6024917 NA 9.5666767 10.6446230 11.0004102 4.6597876 13.8031138 8.4536365 5.3061492 8.6676055 7.3553925 9.4006666 9.5025462 9.4660652 3.9435744 9.1390392 0.1361914 0.1361914 8.2023134 NA 8.4030107 4.8911129 11.9023388 8.3456776 9.9159434 8.5112636 0.1361914 11.0249673 12.4685404 9.9988615 10.0831304 10.3322114 10.1710230 8.3841517 5.4937754 9.6420356 10.6904868 NA 3.7211867 13.7088059 9.2985147 10.0860507 7.8015603 5.0431126 12.6447616 10.8086494 9.8279676 11.0158073 9.2103655 13.4317060 10.7980021 8.6676055 10.0617044 11.5791676 9.5729355 NA 0.1361914 8.7985006 7.6519242 13.2528929 9.1135039 8.5708522 0.1361914 8.7619328 10.4250901 NA 7.6280773 8.6946448 11.5713734 4.9942041 6.2859718 TCGA-AG-A015 64 0 NA 1096 rectum stage i t1 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 3 2 NA 3 3 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 0 0 0 0 1.803387e-06 4.161662e-07 8.635294 11.324460 12.053950 8.137794 9.512103 10.536448 1.827941 NA 10.245792 1.827941 7.835434 10.723767 10.613664 10.182292 10.522587 11.943850 1.8285000 1.7875000 0.0648150 1.1247000 -0.0181990 -0.0181990 -0.0324540 -0.0140740 -0.0102150 -0.0102150 1.2001000 1.2001000 2.4978000 2.4978000 2.4297000 -0.0016459 1.2396000 0.0015425 0.0015425 -0.0301140 1.2499000 1.2499000 1.2499000 0.3643000 0.0058479 0.0058479 0.0014037 -0.0028922 -0.0049675 -0.0049675 -0.0095257 -0.0095257 -0.0095257 0.0648150 0.0648150 1.1414000 1.1073000 1.2174000 -0.0225470 -0.0140740 -0.0140740 -0.0102150 1.2001000 1.2001000 -0.0104910 -0.0104910 -0.0016459 -0.0016459 1.2396000 1.2396000 0.0015425 -0.0153120 -0.0153120 -0.0301140 0.4415800 -0.0258770 -0.0272970 0.3643000 0.000 0.000 0.000 0.000 1.200 1.200 2.430 0.000 0.000 1.240 1.240 0.000 0.000 0.000 0.000 0.000 1.102 0.000 1.782 1.250 1.250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.124 0.000 1.125 1.125 1.236 1.236 0.000 0.000 0.000 0.000 0.371 0.000 0.000 0.000 0.000 1.200 1.200 2.430 0.000 0.000 1.240 1.240 0.000 0.000 0.000 0.000 0.000 1.102 0.000 1.782 1.250 1.250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.124 0.000 1.125 1.125 1.236 1.236 0.000 0.000 0.000 0.000 0.371 5.2873726 4.8868330 NA 15.7645220 10.2058728 1.2429988 9.3567189 9.8886352 9.9065348 7.6352944 4.8868330 NA 9.1971729 10.6417204 12.2270391 9.7408286 10.4203963 10.3009685 8.0045278 5.1498690 3.5649025 10.8985074 0.2429378 5.7665395 8.2708826 7.6608295 10.1453519 10.3683902 11.8677722 9.9776863 8.0243363 10.5883820 6.3927244 3.8279409 12.4506012 13.1607218 9.1040638 13.0809988 7.1854910 12.0539500 4.9978659 7.8428896 2.2429683 14.0468052 4.2429759 12.0426631 10.4141535 10.5306891 10.5364484 6.3927244 12.4624478 9.9100883 8.9606533 12.1071629 10.0806046 0.2429378 NA 10.3436391 10.7801952 11.6250604 12.4843641 11.4621453 8.9776863 8.3876348 11.5960740 13.6268160 6.7665382 9.6005288 10.6639896 7.8723332 11.9211367 11.2015295 0.2429378 8.6352940 11.4843641 11.3244602 9.6941879 8.8904351 8.8831494 15.7645220 8.9434165 7.5558599 10.5225873 8.4078838 8.9810689 10.6629370 11.6534281 9.2052945 14.2304184 9.0011999 9.1884207 11.0994023 10.2029787 7.9294774 4.8868330 11.7403297 10.5750133 11.2181082 10.5581263 10.4813815 8.7388317 9.6309940 11.1640739 9.9520605 12.4486539 3.3304437 8.5694064 9.0210538 11.0308793 7.6692415 12.8533096 7.8428896 7.3090661 7.2542038 6.7024082 9.0663441 10.0647507 9.5558597 8.2597852 8.8466030 2.2429683 NA 6.3090652 NA 9.9928462 4.5649025 11.3350732 9.2000788 9.5421847 11.4717955 NA 10.6363672 14.1523073 9.1225599 10.2457918 10.5524531 9.9978642 8.8316914 5.3722591 10.8777878 11.1545410 NA 6.4909038 13.2943556 10.5398930 10.4028481 7.4771714 5.9708974 13.4273872 10.5191011 10.4315656 10.0325104 10.1822915 12.3274530 10.8805073 8.3197922 11.1130331 11.4621453 10.5225873 NA 2.2429683 7.8119212 5.2873726 13.2562994 9.4645639 9.2542040 NA 8.6566047 9.6005288 2.5649147 8.4028479 7.4813813 11.6239789 5.0503319 3.7024137 TCGA-AG-A016 55 0 NA 276 rectum stage iv t3 n2 m1 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r2 4 NA NA 43.42.0 1 3 3 NA 3 3 4 4 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 4 1.31786e-06 6.589298e-07 8.3752710 11.5303991 12.9073420 8.1413832 9.0582418 8.9204327 2.1755885 0.1755565 10.1585923 0.1755565 7.1979666 11.1628627 10.2322365 9.0793000 9.6268098 12.4727959 0.0181810 0.0181810 -0.0268510 1.0620000 -0.1226100 1.0153000 2.3930000 -0.0163860 -0.0380340 -0.0380340 -0.0080244 -0.0080244 2.3663000 2.3663000 2.4355000 -0.0219210 1.1355000 1.0101000 1.0101000 -0.1145600 3.6569000 3.6569000 3.6569000 0.3362600 0.0149320 0.0149320 0.0181810 -0.0057313 0.1402800 0.1402800 -0.0016629 -0.0016629 -0.0011087 -0.0268510 -0.0268510 1.0620000 1.0300000 1.1558000 -0.1481100 -0.0598210 -0.0163860 -0.0380340 -0.0080244 -0.0080244 0.0000000 -0.0121620 -0.0219210 -0.0219210 1.1355000 1.1501000 -0.0611520 -1.0447000 -1.0715000 -0.1145600 1.1608000 -0.0302670 -0.0867840 0.3362600 1.129 0.000 0.000 0.000 0.000 0.000 2.366 0.000 0.000 1.136 1.136 0.000 1.010 -1.060 -1.060 -0.115 1.028 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.140 0.140 0.000 0.000 0.000 0.000 1.052 1.052 1.156 1.156 2.389 2.389 0.000 0.000 0.336 1.129 0.000 0.000 0.000 0.000 0.000 2.366 0.000 0.000 1.136 1.136 0.000 1.010 -1.060 -1.060 -0.115 1.028 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.140 0.140 0.000 0.000 0.000 0.000 1.052 1.052 1.156 1.156 2.389 2.389 0.000 0.000 0.336 3.8760356 5.2630607 0.1755565 15.1988814 10.4586870 5.6018629 9.0335797 8.0884883 8.5419209 6.7301875 2.9829480 NA 8.9103084 10.2443770 11.9853669 9.3048818 9.9354869 9.2683558 8.3752710 4.5679165 2.9829480 11.4581080 NA 5.8194562 5.3455241 6.5331506 9.164283 11.245720 12.715000 9.437694 8.325346 10.376497 6.790308 3.635035 12.560113 13.282489 9.724421 12.769457 6.487936 12.907342 3.760562 7.737841 NA 14.848908 4.423524 12.732584 10.494142 9.651332 8.920433 6.304882 11.635543 9.325346 9.265711 10.526538 10.206266 NA 1.175620 9.268356 10.080986 11.188921 12.754207 10.533151 8.788578 9.554977 11.857254 12.585785 6.790308 9.565768 10.730188 6.714758 12.0073018 11.7971928 NA 8.3752710 11.0658630 11.5303991 8.7263456 8.0148027 8.5243270 15.1988814 8.4423854 8.7605613 10.9026683 6.2199932 8.5506383 11.5254328 10.2984267 9.1370485 13.9319465 8.8585934 9.1004111 11.3448974 10.1297951 8.3100251 3.8760356 11.7671211 10.0551820 11.7796886 10.9288155 11.0704165 8.9826317 9.5042736 10.1965786 9.4211513 12.6665524 4.3455241 9.1151779 10.4583049 10.0242216 7.6513323 13.0185383 7.7378409 7.0459638 9.1442654 6.0582407 10.6634387 9.5700614 9.2460149 6.6513316 8.3654231 2.4975357 NA 6.5849896 0.1755565 9.4975267 4.8760405 11.9005388 8.7829291 9.5828664 9.1642835 0.1755565 11.3087409 13.0263716 9.5700614 10.1585923 10.0226560 10.3959771 8.4563696 5.8760380 10.3777225 10.6212965 NA 2.9829480 13.9242109 9.9054404 9.7829291 8.0303427 5.1297941 12.6332361 10.9329888 10.2657111 11.4335758 9.0793000 12.7318653 11.4546289 8.2470612 10.1181572 12.3061693 9.6268098 NA 2.4975357 8.6509268 6.8338098 12.6669508 9.1671205 8.5020282 NA 8.8221935 9.5657678 NA 7.6674515 6.5679165 11.2729725 4.1755965 3.9829571 TCGA-AG-A01J 59 0 NA 31 rectum stage iia t3 n0 m0 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 3 3 4 NA 2 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.399366 11.155276 13.078819 7.666081 9.102779 9.845165 2.693387 NA 10.714645 2.956428 7.479984 11.016217 9.434855 9.068427 10.827814 11.112084 0.0084743 0.0084743 -0.0172510 -0.0071958 -0.5260400 2.0874000 2.0874000 0.0093098 -0.0026322 -0.0026322 0.0141900 0.0141900 -0.0107840 -0.0107840 -0.0107840 -0.4925600 0.0373590 0.0296060 0.0296060 0.0183830 1.6594000 1.6594000 1.6594000 0.0465590 0.0084743 0.0084743 0.0084743 -0.0102300 0.0000000 0.0000000 -0.0135400 -0.0135400 -0.0135400 -0.0154660 -0.0172510 -0.0071958 -0.0071958 0.5321200 -0.5260400 0.0093098 0.0093098 -0.0026322 0.0141900 0.0019852 0.0098669 0.0098669 -0.4925600 -0.4925600 0.0373590 0.0220120 -0.4989200 -0.5071200 -0.5071200 0.0183830 -0.5053600 0.0294660 0.0345360 0.0465590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 -0.499 0.000 -0.507 -0.507 0.000 0.000 0.000 0.000 -0.511 1.149 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.532 0.532 -0.526 1.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 -0.499 0.000 -0.507 -0.507 0.000 0.000 0.000 0.000 -0.511 1.149 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.532 0.532 -0.526 1.561 0.000 0.000 0.000 5.278349 4.458920 NA 14.783394 10.305150 4.371461 5.071900 NA 10.469492 8.505886 4.619390 2.693387 9.849218 10.281353 10.712422 8.531331 11.057085 9.047417 8.453609 6.254103 2.693387 12.112927 NA 7.902841 8.241824 7.448275 9.391050 11.135502 12.666942 9.207510 6.763777 9.503317 5.729012 4.956424 12.759746 13.107439 8.948888 12.285845 6.278351 13.078819 4.071900 7.963917 3.541379 14.370931 3.956419 12.322380 9.541385 9.845165 9.845165 6.325656 12.204745 8.851240 8.050940 12.265520 9.965784 2.371447 1.956428 9.354453 10.119653 10.692260 13.288832 10.699012 8.354453 9.391050 11.697310 12.856534 6.729012 8.448275 11.048298 7.926049 12.0399015 11.2888318 1.3714473 8.3993655 11.4708075 11.1552765 8.7551640 8.0153158 7.9412396 14.7833936 7.9935113 8.8792542 10.8960014 8.2169495 8.7113097 11.0350178 10.7301109 7.9388833 14.2540072 9.2325466 8.6660805 10.8092118 8.9451070 7.8871597 6.2043501 11.5237445 10.2541027 11.5046019 10.2632434 10.2738348 8.3430031 9.2138100 10.5588118 9.3227443 13.3615885 3.3714613 9.2992376 9.2826719 10.0925588 8.9824845 13.7211556 7.9639168 6.0993794 8.2843489 7.0579603 10.4562681 9.6050794 8.9658590 6.0153169 9.3487397 0.3715031 NA 7.7551640 NA 9.6729558 5.6933866 12.3069931 8.5313312 10.5046019 9.1820313 0.3715031 11.1519994 13.2055356 9.7829707 10.7146454 10.6660804 9.9880085 8.0296710 4.7637780 9.4642167 11.2022284 1.3714473 5.6568624 13.2335158 9.0857051 10.0788188 7.8471933 5.0153147 12.8128477 10.9202816 10.5637525 11.2586803 9.0684271 12.1338417 11.2130240 8.8267868 8.8431350 11.4916975 10.8278141 3.1788102 2.9564284 8.5641964 4.8308891 12.5963658 9.0008164 8.6978892 NA 8.7545592 8.4482753 3.6933866 7.1658758 6.9106187 11.2216465 6.0438847 5.8950214 TCGA-AG-A01L 58 0 NA 365 rectum stage iiib t3 n1 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 2 NA NA 43.42.0 1 3 2 NA NA NA 4 3 4 3 NA NA 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1.075096e-06 3.121246e-07 8.0521664 11.4613692 12.1298885 7.5549794 8.8372958 9.6825442 3.7773671 -0.0300299 10.7097977 1.9700069 7.9358015 11.2078246 9.8663495 9.3493956 10.1770314 11.6996379 -0.288320 -0.288320 0.149970 0.183010 -0.243610 -0.243610 -0.252910 -0.297920 -0.309070 -0.309070 0.074001 0.021416 2.686800 2.686800 2.977500 -0.257310 0.256860 -0.755970 -0.755970 0.176020 1.637700 1.637700 1.602000 -0.057568 -0.233720 -0.233720 -0.312170 0.104370 0.224710 0.233670 -0.365930 -0.365930 -0.365930 0.151460 -0.806730 0.183010 0.101060 0.232590 -0.243610 -0.297920 -0.269710 -0.309070 0.084955 0.021416 0.227330 0.223920 -0.257310 -0.257310 0.256860 0.256860 -0.755970 -0.850170 -0.850170 0.176020 -0.815710 -0.828530 -0.760360 -0.050193 -0.298 -0.298 -0.309 -0.309 0.000 0.000 2.980 0.224 -0.257 0.257 0.257 -0.756 -0.756 -0.830 -0.830 0.139 0.139 -0.288 -0.288 -0.494 1.602 -0.493 -0.760 0.104 0.104 0.225 0.225 -0.366 -0.366 0.151 0.151 0.147 0.147 0.233 0.233 -0.244 -0.244 -0.184 -0.184 0.000 -0.298 -0.298 -0.309 -0.309 0.000 0.000 2.980 0.224 -0.257 0.257 0.257 -0.756 -0.756 -0.830 -0.830 0.139 0.139 -0.288 -0.288 -0.494 1.602 -0.493 -0.760 0.104 0.104 0.225 0.225 -0.366 -0.366 0.151 0.151 0.147 0.147 0.233 0.233 -0.244 -0.244 -0.184 -0.184 0.000 5.5847280 4.7773724 -0.0300299 14.6891294 10.6851212 4.0574763 9.7854005 5.6138734 9.4004696 8.1940186 4.6704551 2.7773671 9.0993002 10.7431564 11.8100082 10.4076964 10.8963131 9.9022319 8.3537216 5.5549786 4.1399442 11.4253444 0.9700438 5.8279994 7.1598421 6.8403814 9.431497 11.040809 12.288277 9.425344 7.404645 9.619273 5.396283 5.327569 13.098011 12.269798 9.345057 12.153032 6.477812 12.129888 3.876910 8.222682 2.777367 14.814331 4.291942 11.809615 10.518839 10.264213 9.682544 7.770917 11.914363 9.241480 8.532260 10.331961 10.041480 2.554982 2.970025 9.215570 10.036106 10.559668 12.823327 10.798947 9.196429 9.387870 11.718592 12.663940 5.852661 9.134924 11.019866 7.078542 12.7899966 11.5961824 NA 8.0521664 11.0993001 11.4613692 9.1745882 8.4335416 8.4046452 14.6891294 8.8918581 8.5662071 10.7587355 6.9812442 8.3187452 11.3841738 10.7148510 9.0592558 14.1970313 8.7114842 9.5957259 11.4945589 10.7949759 7.4294486 5.6424417 11.5984627 10.4648727 11.2930719 10.7038799 10.3537215 7.9121211 8.8496003 10.5745703 10.4067287 13.3630683 -1.6295009 9.4876865 9.4070200 10.0374515 7.1794702 12.5996014 8.2226824 6.4129610 9.3751585 7.3962820 10.4437229 9.5828856 9.3751585 7.4046452 7.8587606 NA NA 7.0468326 NA 8.9700170 4.7249067 12.5315438 8.6530116 10.1610763 9.4658723 2.7773671 11.0687072 13.5577946 9.8738990 10.7097977 10.5929841 10.0640948 8.6635040 5.2919461 10.4457506 11.5017446 NA 4.7249067 13.4951709 10.3492980 9.9951567 8.0034403 5.8526606 12.6851211 10.8396109 10.7587355 11.4940690 9.3493956 12.7577157 11.8353638 8.5662071 10.2012624 12.0259774 10.1770314 NA 1.5549817 8.8757951 6.3275688 13.2344597 9.1070083 8.7282403 NA 8.6697978 9.1349240 0.9700438 7.9007545 6.9587023 11.4598651 4.4294486 6.9472968 TCGA-AG-A01N 68 0 NA 943 rectum stage iv t2 n0 m1 25-9-2014 female 2009 NA NA rectal adenocarcinoma yes r2 0 NA NA 43.42.0 3 5 3 NA 2 5 4 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.164818 11.329224 12.583105 7.623799 9.196688 9.538363 6.002311 NA 10.242037 4.149869 7.645278 10.796126 9.387210 9.220972 10.105356 11.573333 0.841200 0.841200 0.425360 0.405610 0.882060 0.882060 1.715900 -0.053540 0.334960 0.321070 -0.025893 -0.025893 0.000000 0.000000 0.000000 -0.025329 0.891060 0.408940 0.408940 0.302500 3.292700 3.292700 2.375400 1.204100 -0.063838 -0.018216 -0.018216 0.382700 -0.025620 -0.025620 -0.014641 -0.014641 -0.014641 0.425360 0.425360 0.397160 0.419490 0.864330 -0.954420 -0.024524 -0.036538 0.321070 -0.025893 -0.025893 -0.040752 -0.029608 -0.025329 -0.025329 0.891060 0.925330 -0.489740 -0.465690 -0.465690 0.302500 -0.477540 -0.465790 -0.034631 1.204100 0.000 0.000 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.891 0.891 -0.490 0.409 -0.460 -0.460 0.302 0.302 0.000 0.841 -0.478 2.375 -0.466 0.000 0.383 0.383 0.000 0.000 0.000 0.000 0.425 0.425 0.406 0.406 0.864 0.864 0.761 1.716 -0.110 -0.110 -0.259 0.000 0.000 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.891 0.891 -0.490 0.409 -0.460 -0.460 0.302 0.302 0.000 0.841 -0.478 2.375 -0.466 0.000 0.383 0.383 0.000 0.000 0.000 0.000 0.425 0.425 0.406 0.406 0.864 0.864 0.761 1.716 -0.110 -0.110 -0.259 5.06740639 4.73482882 2.30188025 14.28447977 9.63278732 5.83792306 5.26534312 -0.02004784 9.77110530 7.76784479 3.56490247 -0.02004784 10.06475071 10.66118077 11.88871022 8.63099402 11.03251043 9.14736038 8.26534453 6.76130256 4.30187294 11.77029083 NA 5.26534312 6.72140957 7.28372272 9.98696962 11.83908885 13.04804882 10.07005478 7.93994410 10.41665388 7.15985116 4.37226261 12.09693602 13.14720367 9.64882726 12.92465440 7.71078577 12.58310503 3.30186562 9.05675800 NA 14.46853568 4.97994301 12.73399472 10.08585084 9.68880210 9.53836298 7.16976670 12.07005478 9.87778780 8.80330971 10.83247186 10.23615104 -0.02004784 2.78730708 9.91952154 10.93849510 11.17531457 13.03691869 11.33529343 9.52407602 9.16729445 11.95718292 13.05859354 6.72140957 10.09888336 11.21056329 9.08846681 11.96791689 11.43526958 -0.02004784 9.16481770 11.18022794 11.32922357 8.84722119 8.01336511 9.02706639 14.28447977 8.92538620 8.32867044 10.80807883 7.26534500 8.63099402 11.69547539 10.59465221 9.37855779 14.23327280 8.22787005 9.16729445 10.88156353 9.73148637 9.18695658 1.97995216 11.59142828 10.06342164 11.31867871 10.30412289 10.59188928 8.33308914 9.67517057 10.76784487 9.12968949 12.82581458 -1.61971384 9.41457066 9.67283670 10.05809322 6.97994187 12.98609307 9.05675800 5.76130123 9.38295446 7.84412826 10.66731799 9.25140548 8.91257053 8.34626462 8.92830962 NA -0.02004784 7.93994410 NA 9.24438501 5.88683300 12.11565163 8.59096723 9.82229262 8.96293590 NA 11.44244463 13.35783068 10.24555734 10.24203723 10.21475976 10.25722977 8.68384591 4.43937713 8.74812675 10.10645328 -0.02004784 3.30186562 13.50043826 8.47479781 9.89133427 7.99675084 5.30186928 12.82032689 10.74729919 10.58727263 11.50790799 9.22097221 12.48177953 11.36526555 8.32867044 9.92578125 11.84335430 10.10535581 -0.02004784 0.97995216 7.82549500 8.22311649 13.33419173 9.02979077 8.77110514 0.97995216 8.55203617 10.09888336 8.58356873 6.81283191 7.99675084 11.62874931 4.56490247 7.86868553 TCGA-AG-A01W 67 0 NA 2130 rectum stage ii t3 n0 m0 25-9-2014 female 2004 NA NA rectal adenocarcinoma yes r0 0 NA NA 67.46.0 NA NA 1 3 2 5 4 4 5 3 NA NA 7 0 0 0 4 0 0 0 0 0 4 0 4 0 4 7 0 0 0 0 4 0 0 0 0 0 0 0 4 3.294649e-06 1.040415e-06 8.273907 10.548376 11.680188 7.939488 9.665313 9.692766 2.300446 NA 10.595069 1.715498 7.875357 10.851195 8.802949 9.362944 9.947907 11.636955 0.3925300 0.2936200 -0.4360400 0.0270760 -0.1914900 -0.2020600 0.3642400 0.5422400 0.0087528 0.0000000 -0.4343100 -0.4343100 0.0839200 0.0839200 0.1140400 0.5468300 -0.0209610 -0.0022168 -0.0033909 -0.0766780 0.8161000 0.8161000 0.8161000 -0.0083005 -0.4453400 -0.4453400 -0.4453400 -0.0203720 0.0266540 0.0339780 -0.4465200 -0.4176200 -0.4289800 -0.4360400 -0.4360400 0.0142130 -0.0395920 0.4548700 -0.2089600 0.5615200 -0.4514700 -0.1223800 -0.4343100 0.0246890 0.0290440 -0.4362600 0.0147490 -1.2929000 -0.0209610 0.4245200 -0.4672700 -0.9195000 -0.9225100 -0.0766780 -0.4483500 -0.1286200 -0.0519910 -0.0083005 0.562 0.562 0.000 0.000 -0.434 0.000 0.114 0.000 0.505 0.000 0.000 -0.464 0.000 -0.445 -0.912 0.000 0.000 -0.053 0.393 -0.448 0.816 -0.129 0.000 0.414 0.414 0.000 0.000 -0.447 -0.447 -0.436 -0.436 0.000 0.000 0.455 0.455 0.215 0.364 0.835 0.000 0.000 0.562 0.562 0.000 0.000 -0.434 0.000 0.114 0.000 0.505 0.000 0.000 -0.464 0.000 -0.445 -0.912 0.000 0.000 -0.053 0.393 -0.448 0.816 -0.129 0.000 0.414 0.414 0.000 0.000 -0.447 -0.447 -0.436 -0.436 0.000 0.000 0.455 0.455 0.215 0.364 0.835 0.000 0.000 6.634349 5.174918 3.037417 13.935606 8.660930 5.548375 6.934654 2.522834 9.417658 9.721110 5.522840 4.107805 9.463679 10.412453 11.669319 9.814834 11.259484 9.258518 8.567235 5.443408 3.622380 11.145416 3.037417 7.183091 4.622374 7.844769 9.6163527 10.8220488 11.5119311 9.6283752 9.2662325 10.2633443 7.5672351 5.9822726 12.4387202 13.2135871 10.1532380 12.7418364 7.5163855 11.6801877 4.8447673 7.7433918 1.7154981 14.1386018 5.9822726 12.7588550 10.7768571 9.5163857 9.6927658 7.3448427 12.2297068 10.0181248 8.6580004 10.7741541 10.4340187 0.7154541 NA 9.9225001 10.7996299 11.4438316 12.8825903 11.5042042 7.2623805 8.9077788 11.7287946 13.6530436 7.2853412 9.2292135 10.9622265 8.1501138 11.3278937 11.0713875 -0.2845459 8.2739065 10.8036115 10.5483758 9.0192666 9.0169821 8.9491056 13.9356057 8.7923016 8.3265108 10.0763330 8.2891331 9.6798267 10.9921919 10.9875324 10.8728518 13.8400919 8.6011821 8.8213945 10.3923245 10.2073390 8.6462232 7.3879113 12.4427682 10.6616611 10.3402813 9.5099017 10.3060730 7.8292280 9.7406254 11.0807147 9.4869754 11.9317073 -1.8841677 8.9728738 9.6157490 9.7070077 8.1291140 13.2142104 7.7433918 4.8029480 7.4297314 6.8753574 9.2643077 9.6913339 9.7618459 8.6313652 8.9681512 3.4159209 NA 7.4836699 NA 9.9479068 5.1078050 11.3606940 8.7949707 10.2143350 9.5935368 2.0374174 11.0614455 13.4936657 9.5404446 10.5950691 10.5935368 9.7461530 8.5066487 2.5228342 10.4510419 9.8353996 NA 7.0991900 13.0168392 10.2099314 10.6365829 8.0508760 5.2390466 12.9961117 10.5687954 10.9869489 11.0089575 9.3629443 11.9651919 10.6769355 7.9443044 10.5945100 11.5175983 9.9479068 4.8447673 2.3004459 7.5359200 6.9822726 12.8785065 9.5196168 8.6609297 -0.2845459 8.6120907 9.2292135 -0.2845459 8.8929055 7.5546894 12.3932055 4.5228404 5.1078050 TCGA-AG-A01Y 49 0 NA 1947 rectum stage ii t3 n0 m0 25-9-2014 female 2004 NA NA rectal adenocarcinoma yes r0 0 NA NA 67.46.0 NA NA 4 1 2 5 4 4 4 1 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 7 2.184872e-06 9.016934e-07 8.4264027 10.9787870 12.4940366 8.0454730 10.3826018 10.0341933 -0.2810357 NA 11.1567958 2.0409625 8.5832299 10.8203629 9.6891496 9.9546869 9.8392816 8.6497811 0.66678000 -0.00304750 -0.81893000 -0.02540100 -0.04495700 0.77714000 3.14330000 0.00000000 -0.86594000 0.78196000 0.01265500 0.01265500 -0.01422800 -0.01422800 0.82392000 -0.01064600 -0.06276400 0.76772000 -0.02644100 -0.10946000 0.72792000 0.72792000 0.74594000 2.06710000 -0.89028000 -0.01045900 0.01447000 0.00732610 0.01251600 0.02918400 -0.00498440 -0.78555000 -0.78555000 -0.80823000 -0.80823000 0.00321370 0.01409100 0.04329900 -0.85631000 0.00000000 0.00000000 -0.80633000 0.01265500 -0.00041585 0.78504000 0.79239000 -0.01064600 -0.01064600 -0.04048000 -0.01642900 -0.85718000 -0.83258000 -0.83258000 -0.10946000 -0.85686000 -0.83276000 -0.05671200 2.06710000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.792 0.000 0.000 0.000 -0.831 0.000 0.795 -0.833 -0.109 -0.109 0.000 0.000 -0.857 -0.129 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 -0.780 0.000 0.000 0.000 0.000 1.580 1.580 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.792 0.000 0.000 0.000 -0.831 0.000 0.795 -0.833 -0.109 -0.109 0.000 0.000 -0.857 -0.129 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 -0.780 0.000 0.000 0.000 0.000 1.580 1.580 0.000 0.000 -0.313 7.7358518 6.5645336 2.0409625 13.6528385 9.2268384 6.9088681 6.4605100 -0.2810357 8.0136644 9.4888815 6.6615586 3.8065097 9.2367131 10.9852446 11.9767262 10.1156484 11.3936774 10.2435854 9.3628998 8.0940830 5.1453065 11.5851635 3.3039999 6.4872275 2.8889672 7.9669714 10.120990 11.489295 11.812131 9.774326 8.763438 10.701324 7.577025 6.242606 12.331451 13.852908 9.807832 13.068740 8.036456 12.494037 7.186649 9.482256 4.242603 14.538025 4.625937 11.148973 11.782776 10.507338 10.034193 8.676146 12.866249 10.663024 8.957448 11.344296 11.224359 2.304014 1.303985 9.590949 10.624431 11.591719 13.353968 10.643856 8.149496 9.600158 11.429833 12.711805 7.589408 10.063340 11.141108 8.337429 12.1802673 11.1922421 0.7190520 8.4264027 11.3736797 10.9787870 9.7958593 8.9088681 9.2068637 13.6528385 8.7905062 8.6438562 9.9834863 9.0228244 9.8964632 11.6266855 10.6884302 9.8643773 13.9893390 8.1825682 9.6423713 9.6644875 10.8908460 8.0499607 8.9162605 11.9196358 11.8353877 11.0924526 10.1505413 10.7620710 8.3552335 9.0611184 11.3152334 10.6984689 12.2975744 2.8065097 9.1113611 9.9630388 10.2669022 9.8483267 12.6379069 9.4822560 6.0940840 9.2983596 8.6199104 9.4002822 10.4730961 10.0042609 10.3522659 10.7891646 5.0409713 3.4194850 8.4571358 0.7190520 9.5102066 5.7851320 11.2153982 8.9502649 10.8895947 10.1411084 2.3040145 11.2312903 13.0192532 10.0375865 11.1567958 10.6732400 9.6991832 9.2228695 3.4194850 10.4375766 9.7912969 -0.2810357 8.5134596 12.4384325 9.4352114 10.3226700 8.1988241 5.9088681 12.3707681 9.5150832 10.4655580 10.7756814 9.9546869 12.4281275 10.5263986 8.7931852 10.8347376 11.7884935 9.8392816 0.7190520 4.1639736 8.3785758 7.1027484 12.2955280 10.3967633 9.4281275 3.6259367 8.8541631 10.0633395 2.3040145 9.7063076 8.1784751 12.4751830 5.1784756 5.8687905 TCGA-AG-A020 57 0 NA 334 rectum stage iii t3 n1 m0 25-9-2014 female 2005 NA NA rectal mucinous adenocarcinoma yes r0 1 NA NA 67.46.0 NA NA 1 3 3 3 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 0 4 0 4 0 0 4 7 0 0 0 0 4 0 0 0 4 0 4 0 4 1.907428e-06 6.936103e-07 9.115985 11.269297 11.952947 8.027475 9.979947 10.265054 3.594513 NA 10.616884 NA 7.935553 10.677729 10.085300 9.619840 9.785657 12.219250 -0.0276510 -0.0307650 -0.0140900 0.0130740 -0.2915400 0.0963800 0.0963800 3.0518000 0.0911550 -0.1272000 0.0610790 0.0488780 -0.1472100 -0.1472100 -0.1472100 -0.0448220 0.0223580 0.0000000 0.0000000 -0.0996040 1.6574000 1.7123000 1.8100000 -0.0633010 -0.0344680 -0.0344680 -0.0276510 0.0370760 0.1232900 0.1233300 -0.0147780 -0.0147780 -0.0084385 -0.0124440 -0.0140900 0.0130740 0.0127950 0.0939380 -0.2915400 0.2199100 -0.8107100 -0.7974500 0.0488780 0.0467060 -0.0567120 -0.0567120 -0.0448220 -0.0448220 0.0223580 0.0464170 0.0000000 -0.8684300 -0.8684300 -0.0996040 0.0889820 -0.9573900 -0.9074500 -0.0633010 -0.762 -0.762 -0.797 -0.797 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.868 0.000 0.000 0.000 0.000 0.000 1.646 -0.912 -0.907 0.000 0.000 0.123 0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.292 0.000 0.929 0.929 0.000 -0.762 -0.762 -0.797 -0.797 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.868 -0.868 0.000 0.000 0.000 0.000 0.000 1.646 -0.912 -0.907 0.000 0.000 0.123 0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.292 0.000 0.929 0.929 0.000 5.211187 3.857553 1.687643 14.884855 10.128494 3.857553 8.465702 3.935554 9.887298 8.398432 4.272591 1.687643 9.309677 10.809159 11.664905 9.147057 11.170937 9.649075 7.935553 3.272591 1.272561 11.559915 NA 8.142953 5.442512 7.381112 9.5549040 11.0804793 11.5926361 9.0626647 8.5549038 10.5133791 7.5393744 3.3880655 11.7103398 13.6148477 9.9602551 13.2244795 7.9776440 11.9529473 3.5945127 6.8774498 1.2725607 14.5208118 4.3314831 12.8642659 10.0484723 10.3250471 10.2650540 4.9355540 13.1071905 9.6214781 9.4965894 13.7755024 10.6890334 -0.3124018 NA 9.8462349 10.4458484 11.4574631 12.4046590 11.2772764 9.4917563 9.3547369 11.5479052 13.3411421 6.8474971 9.4240273 10.7313361 7.3600508 11.8826898 11.0072973 -0.3124018 9.1159855 10.5479363 11.2692966 9.1012532 8.4917561 8.2306570 14.8848550 5.3023337 8.8039693 10.8675344 8.2838148 8.2574807 11.1501276 10.6183626 9.9049772 14.3194844 9.1429525 8.6876252 9.8934185 10.1149381 8.2033250 4.4425123 11.5370303 10.0539475 9.6359925 9.9567519 10.1834803 7.7634255 8.8117465 10.5101961 10.2180316 12.6984977 NA 8.8848421 8.9236154 10.7106865 9.2033250 13.4332996 6.8774498 7.5393744 7.9776440 5.6418206 10.1724481 10.1357416 9.4315003 6.9067932 8.2306570 0.6875982 NA 6.3600499 NA 9.4820411 4.6418234 11.5529719 9.4441815 9.7909131 10.1243368 -0.3124018 10.8052683 13.4327743 10.1794783 10.6168837 10.2160794 10.0615779 8.2229007 5.2725869 10.7044335 10.2561229 NA 5.9164432 13.0333077 10.6365837 9.2875381 8.6154626 5.9730280 13.1349668 11.2204682 10.2508215 10.9349595 9.6198399 12.0566773 10.5323310 7.6932500 10.4649545 11.4223349 9.7856573 NA 0.6875982 8.0759438 4.4425123 13.4936713 9.5440508 9.0691683 NA 8.6359923 9.4240273 1.2725607 8.5579901 6.8774498 12.1186004 3.9355540 6.6876248 TCGA-AG-A023 62 1 1581 NA rectum stage iv t4 n2 m1 25-9-2014 female 2005 NA NA rectal adenocarcinoma yes r2 6 NA NA 43.42.0 3 8 1 NA 3 3 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.664276 10.569606 12.813474 7.920797 9.924057 9.664276 4.220361 1.132906 10.044286 4.990873 7.907681 11.057707 9.753114 9.472277 10.107309 11.197637 0.00013863 0.59458000 -0.00788630 -0.00802440 0.54083000 1.80290000 0.53872000 -0.00064083 -0.00747200 -0.00747200 0.00180300 0.00180300 0.56578000 0.56578000 0.54189000 0.00353610 0.00388540 0.57041000 0.57041000 0.00041593 0.61299000 0.61299000 0.61299000 0.05779600 -0.61489000 0.00013863 0.00013863 -0.00470790 0.00000000 0.00000000 -0.00138580 -0.00138580 -0.01285100 -0.00788630 -0.00788630 -0.00802440 -0.01001600 0.00319100 -0.60080000 -0.00064083 -0.00064083 -0.01023200 0.00180300 0.00180300 -0.00387790 -0.00387790 0.00805670 0.00805670 0.00388540 0.00388540 -0.60564000 -0.58333000 -0.58845000 0.00041593 0.61299000 0.00027728 0.01321300 0.05779600 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.000 0.000 0.000 0.000 -0.596 -0.026 -0.583 -0.583 0.000 0.000 0.000 0.574 0.613 0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 0.526 1.033 1.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.000 0.000 0.000 0.000 -0.596 -0.026 -0.583 -0.583 0.000 0.000 0.000 0.574 0.613 0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 0.526 1.033 1.033 0.000 6.322720 5.490445 2.717846 14.042641 8.953073 5.525211 8.559159 NA 9.118736 8.975245 6.507934 3.302816 9.634731 10.730016 14.820981 9.241419 11.317150 9.941858 8.702750 9.339909 4.940251 11.670113 NA 5.624747 6.087092 7.027713 9.531638 10.878569 12.310002 9.287712 8.149702 10.655476 7.075409 6.940249 12.007491 13.350852 9.976815 13.170270 7.167859 12.813474 5.302820 9.758603 2.132906 14.279861 5.624747 12.739762 10.553907 9.987482 9.664276 8.057707 13.081809 10.082721 8.933794 13.418730 10.881926 2.717846 2.717846 9.672053 10.314047 11.538568 13.559159 10.736521 9.317423 8.520912 11.190852 12.305947 6.965784 9.785739 10.563347 8.160800 11.8017792 11.4246405 1.1329058 7.6642759 11.3103138 10.5696058 8.8263813 8.2309264 8.9970185 14.0426411 7.9402490 8.3617131 11.0798006 8.0636318 9.2570156 11.1524850 11.0525025 8.9357659 14.0030663 7.4366749 9.4749689 10.5871936 10.1015610 7.6797890 8.2570158 11.8840199 10.3724928 10.4760800 10.3214832 10.1868202 8.3267647 9.5486360 10.9783844 9.2070358 12.7597554 -1.4667357 9.1357093 9.4968318 10.5111891 9.1524849 14.1588989 9.7586032 5.2621776 9.2952857 9.0032590 10.2915040 9.6066001 9.8505707 6.4702489 9.3399086 NA NA 8.7839460 NA 9.3003125 6.0636324 11.7318772 7.2724460 10.2269719 10.1201583 NA 11.2524839 13.9777961 10.0943440 10.0442863 10.4457772 9.9060334 8.4412332 5.3028198 9.7253513 10.6365014 0.1329058 7.6564563 13.0617827 9.3247679 10.1759215 7.8471401 5.0397833 12.7776519 9.7785527 10.5444053 11.2769151 9.4722768 12.3526678 10.9586481 8.8088513 10.7299598 11.4154036 10.1073089 5.5923255 3.1328894 7.5826207 6.6086274 13.3194728 9.1772885 8.7290840 NA 8.6821782 9.7857392 4.1328976 7.0754086 7.8810870 11.3109366 5.3423485 6.9273098 TCGA-AG-A025 62 0 NA 1520 rectum stage i t1 n0 m0 25-9-2014 female 2006 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 8 1 NA NA NA 4 3 3 2 NA NA 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 4 0 0 0 0 0 0 0 0 2.219553e-06 9.016934e-07 8.303164 11.571653 12.836766 7.914122 9.618081 10.208305 2.744204 NA 9.919836 2.744204 7.651088 11.074474 10.323782 10.052120 9.945271 12.151465 0.00485790 0.00485790 -0.00595220 -0.00346270 -0.01326400 -0.01326400 -0.01326400 0.00041593 0.00000000 0.00000000 0.00555290 0.00555290 0.81259000 0.81259000 0.81259000 0.01084200 -0.00182730 0.01586600 0.01586600 -0.00360110 0.00871770 0.00871770 0.00871770 0.02468900 0.00485790 0.00485790 0.00485790 -0.00774280 -0.00097017 0.01084200 -0.01230000 -0.01230000 -0.01230000 -0.00595220 -0.00595220 -0.00346270 -0.05576900 0.00083195 -0.01326400 0.00041593 0.00041593 0.00000000 0.00555290 0.00555290 -0.00415460 -0.00415460 0.01084200 0.01084200 -0.00182730 -0.00182730 0.01586600 -0.00761010 -0.00761010 -0.00360110 0.01251600 0.00388540 0.00541390 0.02468900 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.146295 5.258771 1.936855 14.584458 10.101749 5.664762 9.521805 3.843733 8.724745 8.236050 4.396276 3.396269 9.261023 10.536755 14.132676 9.251086 10.644201 9.813359 8.388053 5.744196 4.024302 10.431698 NA 3.744193 6.925527 6.184770 9.464319 10.584301 11.180016 9.966129 8.212967 10.387022 7.212967 5.258771 12.378490 13.180909 9.448595 12.983455 6.867579 12.836766 5.222244 8.740973 1.521805 13.991192 4.329159 13.070948 10.291092 10.135287 10.208305 6.992125 12.327280 9.510489 8.785465 13.246034 10.165661 1.936855 1.936855 9.777620 10.200111 11.240623 13.178081 11.200111 8.131599 8.760210 11.258133 12.698601 6.843733 9.637282 10.248591 7.825585 12.1880288 11.4554954 -0.0631077 8.3031643 11.0062920 11.5716533 9.1167512 8.4721177 8.8645907 14.5844581 8.3631071 8.0243053 10.9988884 7.1656608 8.8646201 11.0635467 10.6110345 9.6348176 14.3056215 8.3334470 9.2268611 10.9083858 9.7838996 8.1800160 4.5218046 11.8437329 9.6883864 11.0629014 10.3745943 10.4085174 7.2406234 9.2337584 10.6690097 9.9424669 12.8294078 -1.6624602 9.1728565 9.7381141 10.2921933 7.9647481 13.1493386 8.7409734 7.0136577 8.0505844 8.3031643 10.1241943 9.7425862 10.4489407 7.2587705 8.6816762 NA NA 7.8734804 -0.0631077 9.2833560 6.0029320 11.8501057 8.9480696 10.0309199 10.4535271 3.2587752 10.8452349 13.4854234 9.7823322 9.9198358 10.4064841 9.9026265 8.6783093 4.1847722 10.7099815 11.4007548 NA 5.3631080 13.4791487 9.8847568 9.8895835 8.1414134 5.0661236 13.2614447 11.0083046 10.6545187 10.8975682 10.0521201 12.6411782 11.3488828 8.6510879 10.2628447 12.0319095 9.9452709 -0.0631077 4.1059630 7.9302335 6.6233431 13.1514649 9.5896873 8.9619818 0.9368169 8.9820013 9.6372820 -0.0631077 8.2855705 7.0453665 11.5524719 4.4604018 7.3631071 TCGA-AG-A026 66 1 59 NA rectum stage ii t4 n0 m0 25-9-2014 male 2006 NA NA rectal adenocarcinoma yes r1 0 NA NA 67.46.0 3 4 3 3 3 3 4 4 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 5 5.687605e-06 1.664665e-06 8.339834 11.175420 12.817481 8.566378 9.733932 9.251981 2.222959 NA 9.919242 1.485993 7.727590 10.918546 10.221842 9.896950 9.898221 10.603214 0.6862600 0.6638300 -0.6237100 0.0105640 -0.6610500 1.2684000 1.1963000 -0.0232920 0.0200630 0.0143300 0.0059700 0.0088920 0.6524000 0.6524000 1.5411000 0.0806010 0.0711040 0.0785820 0.0678050 0.5804100 2.8122000 2.8122000 2.8990000 -0.0611520 -0.5924400 -0.5924400 -0.5952800 0.0255310 0.0293970 0.0293970 -0.0442540 -0.6096000 -0.0249350 -0.6242700 -0.6237100 0.0105640 0.0000000 -0.0037395 -0.6721400 -0.6196800 -0.0366740 0.0015255 -0.6034200 -0.0071171 -0.5914600 -0.6066600 -0.5805800 0.0806010 0.0711040 0.0725400 -0.6096000 -0.6015800 -0.6015800 0.5804100 -1.2385000 -0.1127200 -0.5629600 -0.0475310 0.000 0.000 0.000 0.000 0.000 0.000 0.652 -0.607 -0.581 0.000 0.000 -0.610 0.000 -0.596 -0.596 0.580 0.580 0.079 0.664 -0.487 2.854 0.000 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.001 -0.624 0.000 0.000 1.183 0.000 -0.672 1.196 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.652 -0.607 -0.581 0.000 0.000 -0.610 0.000 -0.596 -0.596 0.580 0.580 0.079 0.664 -0.487 2.854 0.000 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.001 -0.624 0.000 0.000 1.183 0.000 -0.672 1.196 -0.604 -0.604 0.000 5.148971 4.901041 4.601483 14.409775 10.132263 7.408836 8.999074 4.855237 9.184130 9.341911 3.708397 1.901031 9.327306 10.715624 12.630875 9.368647 11.636174 9.553887 9.589292 8.961737 4.360470 12.003673 NA 4.148967 6.669225 7.721220 10.031612 11.950890 12.870788 10.351222 7.376775 10.502812 6.695458 4.293356 12.886350 13.105918 10.240891 12.579642 7.746532 12.817481 5.327307 9.794343 0.901031 14.982650 7.622140 12.560145 11.536760 9.774378 9.251981 6.843556 12.758439 9.908069 8.985850 10.431448 10.673356 3.988503 3.222975 9.714823 10.744177 11.631512 13.220431 11.167242 9.457548 9.782155 11.563692 12.672944 7.090866 9.141833 10.856691 7.783685 11.506058 11.639978 3.601483 8.339834 11.306715 11.175420 8.580522 8.515751 9.278252 14.409775 9.304054 8.500954 10.986514 7.416741 9.521261 11.708396 11.310963 8.498200 14.282787 9.009566 9.388882 11.061543 9.213924 7.972504 3.988503 11.782538 10.197958 11.470422 10.862491 10.746532 8.309966 9.665913 10.985186 9.412794 13.060583 -1.698529 9.772947 9.818936 10.374747 7.771406 13.668398 9.794343 8.934465 10.999074 8.045700 10.174837 9.310432 9.016657 2.901050 9.204822 NA NA 7.080951 NA 9.657598 5.923408 11.982192 8.912269 9.692204 9.457548 NA 11.673356 13.305385 10.159607 9.919242 10.614428 10.401883 8.569927 5.110497 10.110495 9.787668 4.544900 4.148967 13.788738 9.803989 10.188754 7.912269 5.783685 12.875815 10.236432 10.534945 11.473268 9.896950 12.672737 11.760576 9.260791 10.802331 12.205108 9.898221 NA 2.708386 8.547780 7.030325 13.447574 9.202538 8.628962 NA 8.723103 9.141833 0.901031 7.765228 7.240891 11.425093 4.901041 5.655930 TCGA-AG-A02G 66 1 1185 NA rectum stage iv t2 n1 m1 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r2 3 NA NA 43.42.0 1 7 2 NA 3 3 3 4 5 3 NA NA 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1.35254e-06 4.508467e-07 6.494548 11.268989 13.054942 8.219314 10.374874 9.087085 4.878887 1.509645 12.947581 NA 7.575745 10.785780 9.768614 10.365324 9.760744 12.199945 0.5431200 0.5431200 -0.5800000 0.0511300 -0.4909900 0.5124600 0.0708170 -0.0041546 0.0000000 0.0000000 0.5414400 0.5414400 1.4233000 1.4233000 1.4233000 -0.5434000 0.1086200 0.0335490 0.0335490 0.0188030 2.9892000 2.9892000 2.5881000 0.0436920 -0.5428700 -0.5428700 3.6569000 0.0573680 -1.1368000 -0.6745300 -0.5588100 -0.0506310 -0.0495590 -0.5743700 -0.5800000 0.0839200 0.0475520 0.3769300 -1.1709000 -0.0041546 -0.0041546 0.0000000 0.5414400 0.5414400 -0.4809100 -0.4809100 -0.5434000 -0.5434000 -1.0709000 0.1086200 0.0335490 -0.5620600 -0.5620600 0.0188030 -0.5591700 -0.1579700 -0.5287900 -1.2929000 0.000 0.000 0.000 0.000 0.541 0.541 1.423 -0.481 -0.543 0.109 0.109 0.000 0.000 0.590 0.590 0.000 0.000 -0.543 0.000 -0.559 2.029 -0.158 -0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.498 -0.076 0.000 0.000 0.377 0.377 -1.140 0.000 -0.466 -0.466 0.000 0.000 0.000 0.000 0.000 0.541 0.541 1.423 -0.481 -0.543 0.109 0.109 0.000 0.000 0.590 0.590 0.000 0.000 -0.543 0.000 -0.559 2.029 -0.158 -0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.498 -0.076 0.000 0.000 0.377 0.377 -1.140 0.000 -0.466 -0.466 0.000 6.17262152 5.31701095 2.24662090 14.93169865 9.64920713 5.53940389 5.13414700 NA 9.70441258 9.14386174 5.56854900 3.92468901 9.69783254 10.87013712 12.63269943 10.18534241 11.13961946 10.15230918 9.75124176 7.09461823 0.92470801 10.64579252 -0.07536799 2.73205207 5.70605252 8.62166070 10.02666895 12.28031968 13.67089267 10.53756175 7.05397583 10.81191394 6.44825509 5.31701095 13.51960101 12.70215411 9.45412386 12.34570615 7.57164799 13.05494208 4.92469376 6.77018286 0.92470801 15.09536168 5.75758336 12.15951071 11.31593688 10.76833173 9.08708461 6.94706062 12.59357826 10.17262077 8.54307862 9.99347157 10.89191954 1.50964518 -0.07536799 9.92469331 11.02140845 10.86059499 12.68104110 11.10211285 9.69712326 9.49644597 11.83790809 12.49146089 7.07444014 9.50212211 11.71341161 7.18208145 11.30839757 11.21182851 NA 6.49454842 10.95604990 11.26898918 9.26231523 9.16548464 9.15351201 14.93169865 9.24210585 8.44039331 11.39738414 8.04363432 9.05139766 11.33036663 11.63722029 8.40701745 14.33785840 8.44825509 9.39433514 10.72963094 9.54124204 7.53940312 6.28224518 12.56177094 11.76310935 11.86353775 10.06552304 10.70441267 8.43992021 9.63549975 11.11883455 9.63549975 12.11659765 2.62513019 9.26231523 9.98318573 10.45802297 7.35932174 12.41127695 6.77018286 5.05397583 8.83458640 6.01215520 10.25112282 9.55222719 8.68684260 9.89512991 8.47158784 NA 0.92470801 8.82253865 NA 10.85173046 5.44825675 11.80810027 9.12681699 10.10335811 10.25784863 0.92470801 11.42702789 14.42379173 10.59002923 12.94758122 10.41554415 9.93731776 8.69948049 5.67958144 9.25784863 10.00505789 NA 5.62513311 13.30366544 8.96405114 10.27452737 7.61336295 5.38412581 13.14386182 10.20198065 10.49739351 11.55723416 10.36532368 12.36867282 11.33832123 9.01745039 10.52214061 12.33726313 9.76074356 4.73204664 0.92470801 8.19592285 7.67958073 12.88993646 11.29210803 8.30839774 -0.07536799 8.30407154 9.50212211 3.50965784 6.85543040 6.89047709 11.77331624 2.92468901 8.01745039 TCGA-AG-A02N 67 0 NA 1885 rectum stage ii t3 n0 m0 25-9-2014 male 2005 NA NA rectal adenocarcinoma yes r0 0 NA NA 67.46.0 NA NA 1 3 2 3 4 3 5 3 NA NA 7 0 4 4 4 0 0 0 0 4 0 0 0 0 4 7 0 0 4 4 4 0 0 0 4 0 0 0 4 2.732825e-05 1.127117e-05 8.8529586 10.9185065 12.0633912 8.6383986 9.9527357 10.6043511 0.2163617 NA 10.6054274 NA 8.0555379 10.3274694 10.8282807 10.7477153 10.2092722 10.8383215 0.00499690 0.00000000 -0.01532900 -0.00055444 -0.01037000 -0.01037000 1.33940000 0.00235810 0.00138680 -0.00124730 0.69428000 0.69428000 -0.01362400 -0.01362400 -0.01078400 0.01978300 0.00943180 0.03031000 0.03031000 0.02496900 0.02025700 0.02025700 0.02025700 0.11389000 0.03439500 0.03439500 0.00499690 -0.00484610 -0.01422800 -0.01422800 -0.00526100 -0.00526100 -0.00761010 -0.01532900 -0.01532900 0.02454800 -0.01299400 -0.01064600 -0.01037000 0.00235810 0.01307400 -0.00124730 0.69428000 0.69428000 0.00986690 0.00986690 0.01978300 0.01978300 0.02834100 0.00943180 0.03031000 0.00041593 0.00041593 0.02496900 0.02025700 -0.78294000 0.02693500 0.05516900 0.000 0.000 0.000 0.000 0.694 0.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.694 0.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.473722 3.801293 1.216362 14.607019 9.761298 4.303795 9.033318 6.303797 10.074315 9.549489 5.831044 3.801293 9.720160 11.374312 12.371152 9.851054 11.186440 10.579373 8.663417 3.916773 2.216331 11.227561 3.538265 8.298483 6.888759 8.704174 10.020465 10.685976 11.264139 9.114179 8.221958 10.494783 7.416006 4.216331 11.747228 13.345134 9.949349 13.066130 7.895814 12.063391 5.739897 7.193614 2.801304 13.597471 3.801293 12.521255 10.616146 10.692776 10.604351 6.930579 13.285112 10.343038 8.391259 11.155178 10.457125 3.023681 NA 9.838386 10.094385 11.093618 11.574436 10.956958 9.657203 8.789981 11.071194 13.054356 7.675765 9.920237 10.237314 6.930579 11.3110713 10.5694806 0.2163617 8.8529586 11.8502372 10.9185065 10.1455923 8.8420426 9.1321833 14.6070194 7.7320338 8.4547385 10.6696045 8.4737216 8.6383986 10.7965924 11.3875106 9.5875660 13.4732796 8.6592774 9.5155418 10.2756783 10.7690029 7.8383858 5.7398967 12.0321174 10.3378674 9.8709699 9.6488758 10.0882390 8.5898949 9.9219662 11.0673020 10.2716163 12.7153276 -1.3830778 8.8236640 8.6791634 11.0123734 8.4595078 13.2959853 7.1936141 9.3090909 8.5606298 6.8601906 9.4451525 9.6572030 9.3887613 6.7709228 9.1050770 6.0492234 NA 7.4257874 1.2163617 10.4678162 4.3037954 10.8736523 9.7670805 10.2289584 11.4807764 1.2163617 10.2716163 13.9304720 9.8106584 10.6054274 11.1239756 9.5672730 8.7937626 3.5382650 10.8190326 10.2996801 NA 9.5040461 12.5856585 10.6467760 10.3887614 8.1821182 6.3037972 13.2367930 11.0139954 11.1551783 10.3156816 10.7477153 11.5376983 10.2303543 8.4737216 12.3667158 10.5040462 10.2092722 1.8012828 4.7398967 7.3132068 4.3862591 13.2406078 9.9894730 8.7320338 NA 8.6236017 9.9202375 0.2163617 9.1470711 6.4257866 11.9232614 5.3037954 6.3248574 TCGA-AG-A02X 77 0 NA 1247 rectum stage i t2 n0 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 0 NA NA 43.42.0 1 2 4 NA 2 2 4 3 5 3 NA NA 7 0 0 0 4 0 0 0 4 0 0 4 0 0 7 7 0 0 0 0 4 0 0 0 0 0 4 0 7 3.468052e-06 1.456582e-06 8.127471 11.593753 11.867455 7.304930 9.668984 9.739867 3.357397 NA 10.319880 2.135009 7.637505 10.688314 9.722470 8.984254 9.666386 8.041896 0.02202400 0.02202400 -0.63186000 0.03256300 -0.60729000 0.01070800 3.65690000 -0.62697000 -0.62988000 -0.62998000 0.02160300 0.02160300 0.01684500 3.65690000 0.01076200 -0.63614000 0.00000000 -0.64443000 -0.64443000 -0.06477700 0.66623000 0.66623000 0.63686000 -0.51434000 -0.00041585 -0.00041585 0.02202400 -0.63074000 0.02272500 0.02272500 -0.61691000 -0.61691000 -0.64368000 -0.62226000 -0.63186000 0.03256300 0.01237600 0.01301300 -1.29290000 -0.62503000 -0.62697000 -0.63491000 0.02160300 0.02160300 0.01656500 0.01656500 -0.63614000 -0.63614000 0.00000000 0.00000000 -0.64443000 -1.26960000 -0.62912000 -0.05630700 0.66623000 -0.62064000 -1.29290000 -0.56326000 -0.627 -0.627 -0.602 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 -0.644 -0.644 -0.639 -0.639 0.000 0.000 0.000 0.000 0.666 0.666 -0.635 0.000 -0.612 -0.612 0.000 0.000 -0.617 -0.617 2.533 1.910 0.000 0.000 0.000 0.000 -0.626 -0.626 0.000 0.000 0.578 -0.627 -0.627 -0.602 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 -0.644 -0.644 -0.639 -0.639 0.000 0.000 0.000 0.000 0.666 0.666 -0.635 0.000 -0.612 -0.612 0.000 0.000 -0.617 -0.617 2.533 1.910 0.000 0.000 0.000 0.000 -0.626 -0.626 0.000 0.000 0.578 5.073606 3.357397 NA 14.978908 11.112285 NA 9.308266 NA 10.119898 6.835444 3.871972 1.550063 9.104631 10.057837 12.638831 9.658567 10.541564 9.550043 6.616131 2.550039 3.135009 7.880959 NA 8.663785 6.193898 8.157373 9.6741638 10.4204072 11.3622198 9.1046312 7.8354447 10.0318419 7.0578369 3.8719718 12.4021818 12.7564464 9.8583816 12.6892741 7.7979701 11.8674551 4.1350012 7.3702218 0.5500141 14.0831289 3.7199719 11.8273299 9.0736044 10.0012536 9.7398670 5.0736060 12.5598711 9.3670261 8.9929859 13.9338818 10.5056924 0.5500141 NA 9.6972475 10.4569331 11.0706612 11.3742057 10.9261679 9.3248295 9.0338582 11.4249931 13.3015866 6.4569326 9.4326855 10.6883143 6.4326855 12.4095773 11.2872898 0.5500141 8.1274713 10.7521664 11.5937534 9.2539460 8.7884472 8.7642158 14.9789084 7.5944366 8.7149495 12.2898231 7.3573972 8.0418957 11.3272978 11.0328505 9.3369329 13.9336118 8.7740441 8.6321915 11.2118206 10.3590067 6.9075949 4.7199665 11.5889615 10.2796633 7.9337467 10.7212194 10.5373066 7.3444584 9.3923928 10.4033521 10.3231817 12.9329745 3.1350094 9.1462324 10.0457777 10.8354447 8.1350048 12.4493994 7.3702218 8.1793991 7.8898927 5.7594968 10.3015866 9.9359049 9.5786669 8.1647526 8.1046312 3.8719718 NA 5.7199665 NA 9.3248295 4.6375059 11.7466446 8.5556670 9.9929860 9.9551840 NA 11.3032593 13.5908459 10.3541736 10.3198804 9.9825844 10.1293585 8.3444584 6.4080240 9.3215320 11.0827004 NA 5.6375059 13.3963164 8.7275117 9.4748550 8.0901320 5.7199665 13.4694645 10.8086085 9.9991912 11.3115938 8.9842538 12.5703280 11.0012536 8.0257758 11.5205871 12.2010942 9.6663865 2.5500387 2.8719619 8.0015011 5.0736060 13.6303604 9.3797652 9.3412055 NA 8.4342742 9.4326855 NA 7.6268582 6.6585671 11.3931784 4.7979675 7.7497146 TCGA-AG-A032 68 0 NA 1157 rectum stage iiib t3 n1 m0 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r0 2 NA NA 43.42.0 3 5 2 NA NA NA 4 3 NA NA NA NA 7 0 0 0 4 0 0 0 4 0 0 0 0 7 4 7 0 0 0 0 4 0 0 0 0 0 0 7 4 2.288914e-06 5.895688e-07 8.860543 10.676962 12.501001 8.052304 9.202139 10.318689 4.188116 1.773068 10.017841 3.188116 7.243401 11.487326 9.886823 9.563483 10.221541 11.620138 0.5238000 0.4885200 3.6569000 -0.0438730 0.4504700 0.4504700 0.4021100 -0.0396650 -0.0627640 -0.0627640 0.0389110 0.0389110 2.2082000 2.2082000 2.1302000 -0.5426000 0.5222300 0.0054139 0.0054139 0.4802700 2.2729000 2.2729000 2.2729000 1.2517000 -0.5517600 -0.5517600 -0.5517600 0.3161800 -0.0320410 -0.0320410 -0.0789430 -0.0789430 -0.0901690 0.9347700 0.9347700 -0.0332690 -0.0438730 0.4686100 -0.0936670 -0.0396650 -0.0396650 -0.0627640 0.0389110 -0.5843200 -0.5653500 -0.5653500 -0.5426000 -0.5426000 0.3828700 0.4947700 0.0054139 -0.5607700 -0.5886300 0.4802700 0.4821700 -0.0706700 0.0000000 1.2517000 0.000 0.000 0.000 0.000 0.000 0.000 2.130 -0.565 -0.543 0.522 0.522 0.000 0.000 -0.561 -0.561 0.480 0.480 -0.063 0.489 0.482 2.273 0.000 0.000 0.316 0.316 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 0.475 0.475 0.450 0.450 0.414 0.414 0.122 0.000 0.000 0.000 0.000 0.000 0.000 2.130 -0.565 -0.543 0.522 0.522 0.000 0.000 -0.561 -0.561 0.480 0.480 -0.063 0.489 0.482 2.273 0.000 0.000 0.316 0.316 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 0.475 0.475 0.450 0.450 0.414 0.414 0.122 5.7427069 5.7116794 1.7730680 14.2886227 9.4896142 4.6475505 8.4121197 4.5804350 10.4700480 9.4360454 5.7730812 3.7730785 9.2542071 10.6597932 12.4157340 10.0249573 10.9841576 9.4619136 8.8211132 6.4169360 3.5100505 12.6605550 0.1881477 5.5456688 7.4918988 7.3276694 9.881605 11.123283 12.250164 9.773081 7.881605 10.022589 6.982534 5.802829 13.514969 12.560983 9.272926 12.489900 6.558979 12.501001 4.188116 8.727277 2.510050 15.303690 3.773079 11.051530 9.713639 9.620660 10.318689 7.142314 12.559895 9.872867 8.382875 10.515671 9.719500 2.188116 3.510050 9.567496 10.473520 11.481015 12.988411 11.120333 9.941736 9.421738 11.577185 13.074196 7.106982 9.671934 10.850786 8.412120 11.6237883 11.5179144 0.1881477 8.8605432 11.2474625 10.6769623 8.8746184 7.9760205 8.9295851 14.2886227 9.4941798 8.0398671 11.4407834 7.9629053 8.8283628 11.1881180 10.7551233 8.9130070 14.0692320 8.5324140 9.3951322 10.8772424 9.7880308 8.3018601 6.8028278 11.2642655 10.4443267 11.2290926 10.4907569 10.7136388 7.3468789 9.0492049 10.9066509 9.2021385 12.9306274 6.0460981 9.4735203 8.8880376 10.1408593 7.3174009 12.8772424 8.7272769 8.3630436 9.0492049 7.4360452 9.8028278 9.0859634 7.8391698 7.9430053 9.0429863 2.1881160 1.1881477 7.4549046 1.1881477 9.2861502 5.9430047 12.4127227 8.4595812 9.8481138 9.2515132 NA 11.2494892 13.7175486 10.4619136 10.0178408 10.7155950 10.1039974 8.2488137 4.5100441 10.6362344 10.4357963 1.1881477 6.4549046 13.2869726 10.3360988 9.7503605 7.4169368 6.0460981 12.6198768 10.1423143 11.0106888 11.6949214 9.5634833 12.1247559 11.8872566 8.8028278 9.8711477 12.0214035 10.2215410 3.5100505 1.7730680 8.4865929 4.9954710 13.9745919 8.9228276 7.7655467 NA 8.4429576 9.6719338 10.2132576 8.2488137 7.3975711 11.6419030 6.1881180 8.0646350 TCGA-AG-A036 71 0 NA 3562 rectum stage iii t3 n2 m0 25-9-2014 male 2002 NA NA rectal adenocarcinoma yes r0 18 NA NA 67.46.0 NA NA NA 3 2 2 4 4 4 1 NA NA 7 0 0 0 0 0 4 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 4 0 0 0 0 0 4 3.710815e-06 1.387221e-06 8.4939543 11.3495358 11.3874569 8.5824393 9.5176586 9.6424769 4.7627687 1.1188913 10.7095020 0.1188913 8.6306676 10.4786645 8.1189151 9.6306676 9.9278791 12.2575067 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.791340 5.118916 3.288846 14.754865 9.467643 5.610768 9.022797 5.404317 10.215630 9.171483 6.096194 4.025808 9.632642 10.758256 11.686871 9.598695 11.597179 9.764573 8.288840 9.524056 4.511234 10.998498 2.440846 6.951805 5.578347 9.007658 9.983101 11.022797 11.676379 9.826274 8.766373 10.424977 7.493955 5.206378 11.894114 13.133981 9.715105 13.236883 7.413536 11.387457 4.118916 8.853625 1.703898 13.750319 4.873803 12.486603 10.612770 9.986935 9.642477 7.130142 13.048728 9.688770 9.163309 10.663879 10.388042 1.703898 2.118924 10.190377 10.709502 11.366842 12.906817 11.257187 7.726245 9.073111 12.081428 13.700469 6.658074 9.276262 10.453188 6.805415 11.4621006 10.5680636 2.1189245 8.4939543 11.9533860 11.3495358 9.7627712 9.1687634 9.2168681 14.7548654 9.2010641 8.6502964 9.8001533 8.4408430 9.1385055 10.9084485 10.8071652 9.9584966 14.0176108 8.7878001 9.7427965 9.5240564 10.5905901 8.0197820 5.8468343 12.4394334 10.6619468 9.9084486 9.6830644 9.9628360 8.9152792 9.7627712 11.5498901 9.8986343 12.0326982 -1.4803575 8.4226955 8.3225564 10.5639297 8.5618584 14.2550249 8.8536246 4.9262699 8.0846995 8.5493673 9.3185873 9.9051845 9.6830644 7.9285865 9.7537260 NA 1.1188913 7.6027308 1.7038980 10.1301422 4.8738034 10.6316554 9.3880416 9.8124020 10.1454384 3.1189079 10.5004579 13.9781585 9.2143118 10.7095020 10.5535432 9.5701261 8.9737832 3.5783470 10.1033333 10.5481542 NA 5.9768952 12.6476132 9.4610562 10.2546242 8.3315328 5.5451807 13.0327393 10.7216138 10.9318944 10.5803943 9.6306676 11.7010569 10.3727625 8.1412826 10.4416881 11.2023943 9.9278791 3.1189079 2.4408459 6.8476512 7.4764667 13.1485473 9.9486376 8.9390940 0.1188913 8.9035499 9.2762619 7.3668424 7.8400144 7.5535433 11.9912050 3.8193514 8.3903779 TCGA-AH-6544 60 0 NA 15 rectum NA t3 n1 m1 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes NA 3 white NA 139.38.0 NA NA 4 2 3 3 2 2 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.15963524 10.90417397 12.41016111 8.15601480 9.64092364 10.57150532 -0.06552124 -1.06552124 10.26029529 1.51939093 7.93724257 10.91635169 9.51468625 9.35964350 9.98427618 11.68324949 0.0107030 0.3312400 0.3660800 0.0134920 0.2956500 0.2770200 0.2897700 -0.0047079 -0.3547600 -0.3547600 0.0280600 0.0109820 0.3539800 0.3539800 0.3539800 -0.3307500 0.0144700 0.0333940 0.0333940 0.0133530 0.3156200 0.3156200 0.3156200 -0.1098500 -0.3353700 -0.3353700 -0.3391800 0.0037465 -0.3515600 0.0237060 0.0022193 -0.7680000 -0.1495200 -0.0008316 0.3660800 0.0134920 -0.3770000 0.1095000 0.2856400 -0.0047079 0.0098669 -0.3547600 -0.3295900 -0.3512200 -0.3545300 -0.3545300 -0.3307500 -0.3307500 0.0144700 -0.2848900 -0.3459500 -0.7191500 -1.1012000 0.0133530 0.3156200 -0.3509900 -0.3470900 -0.1098500 -0.353 0.000 -0.355 -0.355 0.000 -0.340 0.354 -0.355 -0.331 0.000 0.000 -0.346 0.000 -0.719 -0.719 0.000 0.000 -0.004 0.331 0.316 0.316 0.000 -0.347 0.000 0.000 -0.351 0.000 0.000 -0.145 0.000 0.000 0.000 -0.359 0.109 0.109 0.290 0.290 0.000 0.000 -0.110 -0.353 0.000 -0.355 -0.355 0.000 -0.340 0.354 -0.355 -0.331 0.000 0.000 -0.346 0.000 -0.719 -0.719 0.000 0.000 -0.004 0.331 0.316 0.316 0.000 -0.347 0.000 0.000 -0.351 0.000 0.000 -0.145 0.000 0.000 0.000 -0.359 0.109 0.109 0.290 0.290 0.000 0.000 -0.110 2.256346 4.256354 1.741791 15.355095 9.085444 6.418244 9.185910 1.519391 10.606411 9.350169 4.182359 NA 9.218673 10.389755 12.671886 9.960259 11.113404 9.307293 8.901654 1.256346 1.256346 12.109665 NA 6.457990 8.587273 7.976087 9.535270 10.056609 11.352544 9.760182 8.163247 10.179980 7.715788 5.084175 12.109665 13.425592 8.989710 12.716504 7.156353 12.410161 1.741791 7.801706 NA 14.355441 4.021888 11.653816 9.607737 9.995468 10.571505 6.343818 12.599653 8.714147 8.305115 12.624644 9.999844 -1.065521 NA 9.704266 10.324059 11.772647 12.789199 11.698677 9.955012 8.487097 11.694108 13.741883 7.163246 10.212877 10.220408 7.287575 11.72069731 11.12425226 -1.06552124 9.15963524 11.14874679 10.90417397 8.67926157 8.48901662 8.33530727 15.35509505 7.97882198 8.64523403 9.77599210 7.47745958 9.38975501 10.55418918 10.95644869 9.55017690 14.37321954 9.04686726 9.08290426 10.51939015 9.60508388 8.69098412 6.58547937 11.34779115 10.23763769 10.90812507 9.93653945 9.60685304 7.01492543 9.40813333 11.07781091 9.57918524 12.63741415 NA 8.83981476 9.48901662 9.68094193 7.58906384 13.21251411 7.80170642 7.90884232 8.01657655 6.74820895 9.84581964 9.62005245 9.44519181 6.17283151 8.72233008 2.51939093 -0.06552124 5.14387908 NA 9.08797963 4.48901621 11.95506043 9.10184570 9.88279495 9.45896943 1.74179055 11.01491211 13.60900618 9.53434063 10.26029529 11.08417478 10.18116829 8.14874705 4.29197921 11.33877097 10.23879044 1.25634646 5.34381996 12.42251888 11.04523722 10.45357252 7.53805387 5.84131903 12.96172898 10.94705222 11.25409979 10.84019074 9.35964350 11.96578428 10.50712793 8.73855878 10.05790253 11.43725947 9.98427618 4.36069436 -0.06552124 7.40695582 5.63486622 13.90106831 9.45308087 8.80170642 NA 9.44258900 10.21287716 NA 8.53990711 7.48132236 12.09224828 3.57828664 3.79240769 TCGA-AH-6547 79 0 NA 44 rectum NA t3 n0 mx 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes NA 0 white NA 139.38.0 NA NA 1 2 2 5 2 2 2 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7177237 11.3318999 12.0507391 8.8854923 8.8036481 11.1822819 1.7844621 -0.0228300 10.9349272 0.5620836 8.2877124 10.4538458 10.6137242 10.3071258 10.7956818 10.1656884 -0.00304750 -0.00304750 0.00027728 -0.00526100 -0.11273000 0.27332000 0.28337000 -0.00138580 -0.00249380 -0.00395600 0.00221930 0.00221930 0.09507200 0.09507200 0.09507200 0.00471900 -0.00180140 0.03693500 0.03693500 -0.00152430 0.29088000 0.29088000 0.29088000 0.01544700 -0.00304750 -0.00304750 -0.00304750 0.00000000 0.00332990 0.00332990 -0.00399600 -0.00399600 -0.00166290 -0.00547130 0.00027728 -0.00526100 -0.00565490 0.09914200 -0.11273000 -0.00138580 -0.00138580 -0.00395600 0.00221930 0.00221930 -0.00277070 -0.00277070 0.00471900 0.00471900 -0.00180140 -0.00180140 0.03693500 -0.08426200 -0.08426200 -0.00152430 -0.10565000 -0.00885260 0.00541390 0.01544700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.113 0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.113 0.161 0.000 0.000 0.000 8.4508055 7.5695564 5.8839898 15.2836409 9.8787207 5.2625008 8.8764565 6.3779792 11.4616708 10.1063826 8.5026206 6.4447052 9.2899827 11.0843166 11.4814221 9.6000666 10.8787207 9.6146302 8.6530568 8.4649398 5.5469562 12.0617419 0.9770967 6.5545290 9.6009811 8.1743165 10.364578 10.298464 11.265966 9.382241 7.257871 10.664475 6.205918 8.653057 11.456627 13.431527 9.936377 13.380178 6.993908 12.050739 7.715192 9.977100 4.883992 13.538447 5.452833 11.548378 10.076447 10.563939 11.182282 9.021494 13.946171 9.236843 8.456880 12.995561 11.221463 3.562059 4.649523 10.621857 10.106383 12.287570 11.578406 10.707994 9.117929 8.797279 11.886243 13.279096 6.901912 9.894472 10.469954 7.862796 11.6794888 10.6119106 1.5620836 9.7177237 11.8339142 11.3318999 9.4355063 9.1950572 9.9728596 15.2836409 7.6670973 7.8929793 10.9963428 10.2659657 8.8178774 10.8350806 11.8397369 8.0909460 14.2171083 8.6119108 9.5890466 9.7916821 9.0022392 6.7518868 10.8048393 10.5931889 10.6177965 10.1350781 10.3428753 10.0125860 8.2167221 8.9019122 11.5079936 10.5109159 12.9296916 NA 9.3477870 8.2785958 10.2740158 11.2567102 13.0211521 9.9770996 9.1128088 8.3822410 9.8528489 10.6415468 10.4421558 8.7650023 6.8300968 9.5104293 -1.0229766 NA 9.2520601 -1.0229766 9.8551505 6.8597422 11.2911163 9.5964026 10.6428796 10.1198449 0.5620836 10.2671185 13.2904078 10.3678060 10.9349272 10.7996704 10.0744733 9.0632357 5.5620623 10.7394817 11.4369564 3.6775421 10.4169305 12.4744525 9.8922321 10.8268956 7.5045767 7.2059183 12.2810230 10.6232083 11.3747742 10.3779791 10.3071258 11.5538201 9.8749451 8.8673640 10.4457236 10.5853544 10.7956818 7.2854383 4.2625008 7.8390860 3.5620592 13.8125579 9.9011698 9.8123606 3.7319869 8.8892256 9.8944717 -1.0229766 8.3012351 7.1268469 11.5191642 4.5316871 8.2967717 TCGA-AH-6549 66 0 NA 6 rectum NA t3 nx mx 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes rx NA white NA 139.38.0 NA NA NA 1 3 3 3 1 4 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.377942 11.857425 11.829995 9.237044 9.605957 10.644719 0.937043 2.052555 11.015446 1.811553 8.013888 10.993936 10.369266 10.195140 10.621821 11.308849 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.59051519 4.76150336 3.74443023 15.67187860 9.49421698 7.02453577 9.12689699 4.69195842 9.19367418 9.08681958 5.40739354 3.99596383 8.63866760 11.36403597 13.17333580 9.51387166 10.91721199 10.53574525 10.17388385 6.10030280 3.77837681 11.94258000 -0.06295699 2.99597287 4.87567196 5.64673006 9.797642 11.321317 12.643209 10.132650 9.041234 11.319516 7.660449 5.270974 11.595730 13.716279 9.603592 13.345402 7.536985 11.829995 4.374476 9.703049 1.522056 15.064086 4.352109 12.421392 11.095682 10.545546 10.644719 7.279888 13.068018 9.342214 9.772070 11.316270 11.437084 0.937043 2.159468 10.293891 10.507244 12.468373 12.839824 11.702911 8.996867 9.495493 13.060008 13.729727 7.499315 10.151392 10.664142 7.463246 11.51513053 11.37690330 0.67400861 9.37794167 12.28312439 11.85742526 9.51198129 9.62240531 10.06592594 15.67187860 8.63403996 7.43425875 11.28284727 9.24237409 9.09862431 10.42925943 11.20405413 9.36569779 15.05631077 9.34221382 10.47623120 10.03773473 9.83642929 8.90477911 4.63751171 11.94585116 10.34327745 9.57852214 10.58872213 10.87787536 9.86822360 10.61713885 11.76560560 9.97416174 11.55496991 NA 8.35633047 9.41348111 10.22670708 7.27395128 13.11749962 9.70304912 7.40195807 8.66499297 9.05168233 9.04907745 9.80332101 7.67178235 11.00203968 9.64039932 4.10700151 4.21009269 8.10532660 -1.64791949 9.25523870 5.17228748 10.96911810 8.92291438 9.71185949 10.22247458 0.67400861 10.04690313 14.45133442 9.83944758 11.01544565 10.71952470 10.48428830 9.97781869 2.93708069 11.17527808 10.00819959 NA 5.31789373 12.76309117 11.11179008 10.19446028 7.74455603 6.35211054 13.60938724 11.29956424 11.44552746 10.43459164 10.19513976 11.77272810 9.76150087 9.13919626 10.20931335 10.82022476 10.62182102 -1.64791949 0.35208051 8.42741510 4.46063118 13.58171736 10.49134145 9.17069198 -0.06295699 8.59675927 10.15139157 0.93704301 8.95109293 8.51952814 12.58939458 5.56156443 8.28136814 TCGA-AH-6643 50 0 NA 21 rectum stage iiic t3 n2b m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 8 white NA 139.38.0 NA NA 4 3 2 5 1 1 2 1 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.346515 11.278537 16.979969 8.000372 10.253405 10.603493 -0.177066 -1.176903 10.454585 1.407897 8.294628 10.881283 10.460936 10.122739 10.558509 11.406506 1.0388000 1.0388000 0.1446500 -0.0019399 0.4663900 0.4663900 0.4663900 0.0026981 -0.4455500 -0.4455500 -0.0246610 -0.0246610 0.4434200 0.4434200 0.4434200 3.0501000 0.0111210 3.6569000 0.6727000 -0.0135400 0.4602400 0.4602400 0.4602400 0.0000000 -0.4570500 -0.4507600 -0.4549100 -0.0400730 0.0125160 -0.0031859 -0.4543600 -0.4543600 -0.4543600 0.1333200 0.1446500 -0.0019399 0.4139600 0.3063300 0.4735800 0.0026981 0.0026981 -0.4455500 -0.0246610 -0.0246610 -0.0772120 -0.0772120 -0.3162200 -0.3162200 0.0111210 0.0111210 -0.4419900 -0.4383200 -0.4383200 -0.0135400 -0.3849300 -0.3161100 0.0262330 0.0000000 0.000 0.000 -0.446 -0.446 0.000 0.000 0.443 0.000 -0.316 0.000 0.000 -0.289 0.153 -0.438 -0.438 0.000 0.000 -0.451 0.588 0.460 0.460 -0.316 0.000 0.000 0.000 0.000 0.000 -0.454 -0.454 0.133 0.133 0.000 0.000 0.306 0.306 0.466 0.466 0.373 0.000 0.000 0.000 0.000 -0.446 -0.446 0.000 0.000 0.443 0.000 -0.316 0.000 0.000 -0.289 0.153 -0.438 -0.438 0.000 0.000 -0.451 0.588 0.460 0.460 -0.316 0.000 0.000 0.000 0.000 0.000 -0.454 -0.454 0.133 0.133 0.000 0.000 0.306 0.306 0.466 0.466 0.373 0.000 0.000 6.2905589 5.1083572 6.2152709 14.8059235 9.2986863 3.3465173 10.0535738 0.4079509 9.7966503 8.5761695 5.6809347 1.4078965 8.7071234 11.1247348 12.8430647 10.4265793 11.3734592 10.2787938 9.2874986 9.7617974 3.1448785 11.2392226 1.1448948 6.7595913 7.5845041 7.3386526 10.800233 10.880606 12.189821 10.653864 10.962824 11.848092 8.140366 3.144878 8.468611 13.870886 11.871440 14.029586 8.308782 16.979969 4.705596 8.813057 -0.177066 14.388591 5.422865 13.925790 11.140648 10.365017 10.603493 7.931477 12.998892 10.234464 9.204496 13.111098 10.330748 -0.177066 1.630312 10.174444 11.404153 13.243374 13.279692 11.857752 9.561890 8.878235 11.692739 14.171612 8.286477 10.253928 10.248169 7.808795 11.652081 10.933436 -0.177066 9.346515 11.356283 11.278537 9.836276 9.212046 9.612486 14.805924 9.284432 8.424724 9.138103 7.495379 9.125592 10.825416 13.245872 8.861543 13.854180 8.848092 9.876200 9.874162 10.214196 7.385195 0.822934 11.498028 10.890387 7.702536 10.375622 9.915049 7.796650 9.138103 11.381134 10.316808 12.036441 NA 8.597740 9.132429 10.352383 6.920985 14.068840 8.813057 7.952236 8.755168 7.875521 8.615743 9.988488 9.301723 7.693318 11.131861 -1.176903 1.407897 6.623852 NA 8.615743 4.910416 11.014937 9.194730 10.409793 10.154430 NA 10.710174 14.186609 10.234993 10.454585 10.947074 9.992878 8.584504 3.144878 11.826998 9.991374 2.144895 0.822934 12.326779 10.995380 10.804877 7.523393 6.544053 12.845494 10.107777 10.224899 10.259144 10.122739 12.001618 9.696397 8.775694 11.718149 11.644129 10.558509 NA NA 8.327931 3.346517 14.027257 10.035449 9.309788 -1.176903 9.046737 10.253928 3.144878 9.133566 8.367917 12.124306 4.180506 4.931475 TCGA-AH-6644 73 0 NA 22 rectum NA t3 nx mx 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes NA 0 white NA 139.38.0 NA NA 4 3 2 5 1 1 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.578562 10.975795 11.676854 8.380822 9.353341 10.668914 3.237870 NA 10.973218 1.167486 8.510882 10.370088 10.272859 10.110675 10.176463 11.039072 0.7570000 0.7570000 0.3617600 0.3711700 0.6188100 0.6188100 0.7889100 -0.0031859 0.0000000 -0.0104790 -0.0190400 -0.0190400 0.7364400 0.7364400 0.7159000 0.0140510 0.9332500 0.0253490 0.0296060 0.0417410 1.1654000 1.1654000 1.2203000 0.1477100 -0.0047079 -0.0047079 -0.0047079 -0.0019399 -0.0310650 -0.0221950 -0.0343590 -0.0343590 -0.0343590 0.3617600 0.3617600 0.3711700 -0.4606700 0.7440400 -0.8954900 -0.0031859 -0.0031859 -0.4456600 -0.0190400 -0.0040158 -0.0077482 -0.0077482 0.0073609 0.0140510 0.3268900 -0.3312300 -0.4137200 -0.4239600 -0.4239600 0.0417410 1.1654000 0.3404700 -0.4047300 0.1477100 0.000 0.000 0.000 0.000 0.000 0.000 0.734 0.000 0.000 0.795 0.464 -0.401 0.000 -0.424 -0.424 0.000 0.000 0.000 0.757 1.165 1.165 0.340 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.371 0.371 0.750 0.750 0.619 0.722 0.386 0.386 0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.734 0.000 0.000 0.795 0.464 -0.401 0.000 -0.424 -0.424 0.000 0.000 0.000 0.757 1.165 1.165 0.340 -0.405 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.371 0.371 0.750 0.750 0.619 0.722 0.386 0.386 0.148 7.718990 5.954071 4.933011 14.345703 9.595416 3.889941 9.329362 -1.154570 9.859567 8.633449 6.130949 4.093476 9.607098 10.744903 12.876214 9.561508 11.135277 9.775544 8.729717 9.806272 5.304978 12.240411 1.430499 5.489402 7.734290 8.703527 10.696124 11.166629 12.247226 10.878281 7.979973 10.325327 7.185397 5.545987 10.827827 13.017974 10.189287 13.410768 8.321280 11.676854 5.845545 10.324316 2.430499 13.961525 6.271810 11.374977 10.942920 10.694951 10.668914 9.337400 14.197728 9.967727 9.578562 9.133259 10.880345 2.845550 3.369103 10.404445 10.804824 12.154454 12.611143 11.179820 8.231409 9.185396 12.527553 13.720480 6.566646 10.211869 11.342400 8.220586 11.9770819 10.8238994 -0.1544096 8.5785618 11.2151438 10.9757952 9.3100922 8.9927514 9.0403031 14.3457033 7.5179717 6.5870139 9.5870133 8.3943684 9.0982119 11.3458904 11.1867873 9.1292830 14.6134205 8.5091044 9.1367172 9.9055668 9.9651361 6.7281899 6.2884896 11.7218715 10.9933873 9.5390333 10.1640892 10.1618280 9.4685774 9.1436090 11.3250741 10.2052960 11.9579517 NA 9.3866431 8.8084423 10.4258049 8.3453924 14.1896342 10.3243160 6.2118688 8.9566819 10.2744300 9.1447543 10.2691876 10.6660844 8.1964856 10.1997958 1.6529224 NA 7.7880612 -0.1544096 9.9042146 5.3049782 10.9485063 8.8637465 9.8040991 10.5095492 -0.1544096 10.5059881 14.0536283 10.0390718 10.9732183 10.7685024 10.1453268 8.8370684 3.6528995 10.1111615 9.6522572 2.0154619 4.7997453 12.4506786 9.4239191 10.9475221 8.3614236 6.9062424 12.5820540 9.6577238 10.0827563 11.0003645 10.1106750 12.2393391 9.9082671 8.4930048 11.1481853 11.0495061 10.1764633 3.9748321 2.6528995 8.0602295 1.8455503 14.1504681 10.0310413 9.1787017 -0.1544096 9.1358188 10.2118686 3.8899407 8.5853269 6.7997427 11.6782387 4.5459869 7.0839515 TCGA-AH-6897 48 0 NA 140 rectum stage i t2 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 158.34.0 NA NA 1 1 3 3 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.9936200 11.3098988 12.7010583 7.7405006 9.4247355 10.3385788 -0.7712736 NA 10.6221387 1.2287264 8.1386415 10.9024990 9.8526297 9.5710897 8.9204919 10.4024253 -0.0073339 -0.0073339 0.0171240 0.0079175 -0.0176660 -0.0176660 -0.0176660 -0.5093900 1.2353000 0.4417200 0.0000000 0.0000000 0.9781200 0.4361400 0.4361400 -0.0027707 -0.0468540 1.2179000 1.2179000 -0.0851920 0.8564000 0.8564000 0.8564000 0.1121300 -0.0073339 -0.0073339 -0.0073339 0.4185700 0.0124340 0.0125160 -0.0159940 0.0051359 -0.0445480 -0.0105630 -0.0105630 0.0079175 -0.0112430 0.4563200 -0.0176660 -0.0056757 -0.5165500 0.4417200 0.0000000 0.0000000 -0.0111980 -0.0127840 -0.0027707 -0.0027707 -0.0286280 -0.0150370 -0.5618600 -0.5258300 -0.5258300 -0.0851920 0.4505400 -0.0231550 0.4151300 0.1121300 0.000 0.000 0.442 0.442 0.000 0.000 0.436 0.000 0.000 0.000 0.000 -0.562 1.218 -0.526 -0.526 0.000 0.000 0.000 0.000 0.856 0.856 0.000 0.415 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.456 0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.436 0.000 0.000 0.000 0.000 -0.562 1.218 -0.526 -0.526 0.000 0.000 0.000 0.000 0.856 0.856 0.000 0.415 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.456 0.456 0.000 0.000 0.000 0.000 0.000 4.7523097 2.9291850 0.2287264 15.0696975 8.5708230 5.2511169 9.2552718 4.7206013 8.9786178 7.1594859 4.3986719 4.0360989 9.8744066 11.0251935 11.7170905 9.5574231 11.3876735 9.7444481 9.3372727 3.7523097 2.5506791 12.0328793 0.2287264 7.3320357 6.5596646 5.9291874 9.9395547 10.8360785 11.8851731 9.9283207 8.8923063 11.1435071 8.0991132 4.4766733 12.9459962 13.7981292 9.1174914 13.4753404 6.1496374 12.7010583 2.3986787 7.6675402 1.5506544 14.3600426 3.8726022 11.6199919 9.3095657 10.1067991 10.3385788 6.4086575 12.6209315 8.1356390 9.5141505 8.7698448 10.7295902 NA 0.8136889 9.5245172 10.0092880 12.1543027 13.5843058 10.9038232 9.2029189 8.3028897 11.6986444 13.0840061 8.2594156 9.7523102 9.8726044 7.7285940 12.0346936 10.8193353 NA 7.9936200 11.6119125 11.3098988 8.8489681 8.7206013 9.1771155 15.0696975 7.3424907 6.9969321 10.2799572 8.9099867 9.0393199 10.8118310 10.2921433 10.1520980 14.5920959 8.6943147 10.0898351 9.3746805 10.2745079 8.5619035 5.9566677 11.9421348 10.3201836 11.3055638 10.0513191 10.2308600 9.9823829 10.3022204 10.7300879 10.6226749 12.3567538 NA 8.9309209 9.1474922 9.6027009 6.5416310 13.2409363 7.6675402 6.5685976 7.1535612 6.5596646 9.7842961 9.8707999 8.7004234 10.3398840 8.0264100 0.8136889 2.2287571 5.8286620 NA 9.9161240 2.6881804 11.3135566 8.9169985 9.7405009 9.3695779 2.2287571 10.3650986 13.6907392 9.1098622 10.6221387 9.7775701 10.2088879 9.4136235 3.7523097 10.6043307 10.7803508 NA 6.0742378 12.3366192 10.2566543 9.4575670 7.3055638 7.0804978 13.0228595 11.1546735 11.5464435 11.0513191 9.5710897 12.4980211 9.9073484 7.8833844 10.4707314 11.0878947 8.9204919 NA 0.2287264 8.1176135 3.6210672 13.5763696 9.6830476 9.2497281 -0.7712736 8.3429071 9.7523102 -0.7712736 8.6820188 8.2483389 12.3205142 3.9291850 2.8137094 TCGA-AH-6903 46 0 NA 55 rectum stage iiib t3 n1b m0 25-9-2014 male 2010 NA NA rectal mucinous adenocarcinoma yes r0 3 white not hispanic or latino 158.34.0 NA NA 1 2 NA NA 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.736492 11.356659 12.110092 7.946382 9.720672 10.625630 1.839234 -1.067636 11.111182 4.102289 8.245244 10.309843 11.295127 10.085102 10.406321 11.803496 -0.00055444 -0.00055444 -0.59556000 0.00930980 -0.00304750 -0.00304750 -0.00304750 -0.00152430 -0.00387790 -0.00387790 0.00972760 0.00972760 -0.00070666 -0.00070666 0.00791750 -0.01354000 -0.01986300 -0.01340200 -0.01340200 -0.02862800 0.52993000 0.52993000 0.52993000 0.00958830 -0.00055444 -0.00055444 -0.00055444 0.00305220 0.01181800 0.01181800 0.01209700 0.01209700 0.01209700 0.00458000 -0.59556000 -0.00688370 0.00930980 0.01028500 -0.00304750 -0.00152430 -0.00152430 -0.00387790 0.00972760 0.01220000 0.00124810 0.00124810 -0.00691950 -0.00691950 -0.01986300 -0.01986300 -0.01340200 0.04797800 -0.00816240 -0.02862800 0.52993000 0.00055459 -0.02562000 0.00958830 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.324677 3.289908 2.739719 16.019093 9.600360 1.932364 9.725151 14.284957 10.931657 8.540616 5.281090 4.289916 9.245244 11.105258 12.486530 9.631934 11.236285 10.120023 8.313904 3.932364 2.976749 11.364642 -2.067939 5.993056 8.060355 7.561718 9.6414451 10.5791450 11.9199806 9.5544131 8.0171698 10.7417275 7.4984152 3.2177581 11.5706841 13.3781521 9.7652513 13.3892932 7.0642179 12.1100922 3.8630960 8.1539482 1.6327800 13.7597536 7.0461036 12.8802721 10.7358870 10.3404256 10.6256304 6.7965471 13.0080493 9.4212056 8.8134753 12.0434154 11.1534952 -2.0679388 -0.4827747 9.4642300 9.9811886 12.1405194 12.7419787 11.1127367 8.2142914 9.0198242 11.9407899 13.0617248 7.0972684 9.8861939 10.5943620 7.8952572 11.45983829 10.47901466 -1.06763641 8.73649224 11.94934364 11.35665884 9.62017436 9.53227410 9.78800847 16.01909313 9.16418238 7.64316786 9.86826296 9.13264701 9.49173828 10.24013136 11.45886052 9.39781045 13.99927033 8.77077752 9.20207239 9.85122449 10.46836562 7.41416091 5.70054514 11.54959915 11.38511730 10.30685746 9.78839763 9.13325988 8.20514273 9.55943904 12.00189497 10.57734413 12.31942745 NA 8.48310796 8.53598760 10.93095173 10.02841748 13.51203078 8.15394818 9.27276787 6.44015657 7.56898593 9.14546552 10.20031835 11.08970821 7.69889007 8.95888471 NA NA 6.08717852 2.45591240 10.06293186 3.60478300 10.95143073 9.68139269 10.09033979 11.62748081 0.25423121 10.37789353 14.12557861 9.36019789 11.11118172 10.66091962 9.59858536 9.02048692 5.41617768 11.60853876 10.30209498 -1.06763641 6.53598760 12.62514021 10.76564671 11.15198359 7.31822373 6.34175275 13.44015592 11.15877345 11.55074679 10.16687936 10.08510248 11.82329053 9.94847309 8.61272072 11.42446482 10.91321488 10.40632067 -0.06763641 1.63278005 6.89808740 3.10228859 13.70982210 10.50031738 9.57124960 0.73967531 9.02536938 9.88619391 -1.06763641 8.80964531 7.34175186 11.93438514 4.64660623 6.92954130 TCGA-BM-6198 73 0 NA 310 rectum stage iiib t3 n1 NA 25-9-2014 male 2010 310 NA rectal adenocarcinoma no r0 0 white not hispanic or latino 122.34.0 NA NA 1 2 2 5 1 1 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.77882030 10.75228304 11.30443849 8.38409040 9.92379424 10.70740055 4.73793007 0.09410092 10.05769016 2.09406713 8.26148944 10.58492239 10.13024518 7.52033660 9.79277614 8.17355622 0.745550 0.799360 -0.471840 0.165490 -0.473750 -0.502470 0.186150 0.197240 0.183130 -0.461750 0.097826 0.097826 0.091438 0.091438 0.091438 0.219440 0.139070 -0.469940 -0.469940 0.065649 0.195420 0.195420 0.195420 -0.143700 -0.461420 -0.461420 -0.467600 0.150850 -0.463980 -0.083605 -0.482080 -0.469190 -0.469190 -0.469510 -0.471840 -0.497570 0.180400 0.000000 -1.203700 0.178140 -0.456730 -0.461210 0.097826 0.082469 -0.469190 -0.469190 -1.292900 -0.459400 0.139070 0.140870 -0.469940 -0.542200 -0.542200 0.065649 0.195420 -0.041845 -0.469180 -0.128950 0.178 0.178 0.183 -0.278 0.000 0.000 0.000 -0.469 -0.459 0.139 0.139 -0.470 -0.470 -0.464 -0.464 0.000 0.000 -0.461 -0.278 0.195 0.195 0.000 -0.469 0.156 0.156 -0.464 -0.464 -0.482 -0.482 0.125 -0.344 0.165 0.165 0.801 0.801 -0.293 0.181 0.000 0.000 -0.144 0.178 0.178 0.183 -0.278 0.000 0.000 0.000 -0.469 -0.459 0.139 0.139 -0.470 -0.470 -0.464 -0.464 0.000 0.000 -0.461 -0.278 0.195 0.195 0.000 -0.469 0.156 0.156 -0.464 -0.464 -0.482 -0.482 0.125 -0.344 0.165 0.165 0.801 0.801 -0.293 0.181 0.000 0.000 -0.144 7.945821 7.258979 3.679030 14.373789 8.725249 6.202596 8.818585 1.094101 10.599387 10.326492 7.071352 5.048267 8.816879 10.912654 12.365680 9.913452 11.100047 9.965977 8.703250 7.766497 4.416002 11.875636 4.048271 5.138466 7.341999 8.062739 9.947381 10.294970 11.147319 10.496551 9.075639 9.957483 6.625453 5.617633 12.280805 12.636862 10.020367 12.747364 8.442534 11.304438 7.933275 8.961350 1.415975 13.163521 4.451627 12.965881 10.158814 10.394424 10.707401 8.964436 13.896083 10.018884 7.875431 13.352785 10.340218 1.901417 1.679018 11.192762 11.214309 11.534422 11.341999 11.978051 8.972306 8.850628 11.611495 14.255046 6.701402 9.446115 10.833430 8.349100 11.4190958 11.0211087 NA 8.7788203 11.0017133 10.7522830 9.3216876 8.8965879 8.9628940 14.3737895 9.6293470 6.5370149 11.1070452 9.6058241 9.4734499 10.7170385 12.0360361 9.4017049 14.5089879 8.9979534 9.0940716 10.8236923 10.0409777 8.9285427 8.2130128 11.6048357 10.6215485 10.9277523 10.2387298 10.4804730 8.9372387 9.4636688 11.1087894 10.0159125 12.6062058 NA 9.7442257 8.8737907 10.6990879 8.9736549 12.0138659 8.9613501 5.9767142 8.3108172 8.7753100 9.2949701 10.1316184 8.3180732 7.4603936 8.9628940 NA NA 8.7050963 0.6790634 9.4450107 5.9014269 11.4818196 9.0277623 10.0329160 9.4171263 NA 10.5834177 14.6863534 11.0989942 10.0576902 11.7331861 10.0777777 7.9364218 3.6790296 10.5442518 10.0855155 -0.9058991 8.3561663 13.0963591 9.8680350 9.8514616 8.3037931 5.8622555 13.0410692 10.5359782 10.2463564 11.1226683 7.5203366 12.1845148 10.8489590 8.7197803 9.5171875 11.3649508 9.7927761 -0.9058991 5.1815359 8.5962669 7.2739802 14.1306744 9.3396242 9.0218495 3.0940671 8.6621036 9.4461150 NA 8.2207759 7.7234282 11.9990824 4.0482711 8.4949508 TCGA-CI-6619 41 0 NA 184 rectum stage iv t3 n1c m1 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes NA NA white not hispanic or latino 139.38.0 NA NA 1 1 NA NA 2 2 2 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0046112 11.6104215 12.1389124 8.1022539 8.1847162 10.3272203 1.2778063 -0.3072157 10.9123340 3.1522970 7.8298540 10.6726454 10.0651839 10.1359205 10.2075770 11.1499873 0.0539480 0.0539480 -0.0146410 0.1896500 0.1614500 0.7230100 0.7230100 1.2635000 -0.0167040 -0.0167040 -0.0018014 -0.0018014 0.5380100 0.5380100 0.5380100 -0.2079600 -0.0123000 0.1685000 0.1685000 -0.2111900 0.6844000 0.6844000 0.6844000 0.0501080 0.0498240 0.0498240 0.0539480 0.0000000 -0.1634500 -0.1653200 -0.2097000 -0.2097000 -0.2097000 -0.0278080 -0.0146410 0.1896500 0.1896500 0.3903800 0.1614500 0.0989970 0.4114500 -0.0167040 -0.0018014 -0.0044227 -0.2064700 -0.2064700 -0.2079600 -0.2079600 -0.0123000 -0.0123000 -0.2198500 -0.2146600 -0.2146600 -0.2111900 0.6931600 -0.0117490 -0.2124300 0.0501080 0.000 0.000 0.000 0.000 0.000 0.000 0.538 -0.206 -0.208 0.000 0.000 -0.051 0.169 -0.215 -0.215 0.159 0.370 0.000 0.000 0.684 0.684 0.000 -0.212 0.000 0.000 -0.165 -0.165 -0.210 -0.210 0.000 0.000 0.190 0.190 0.390 0.390 0.161 0.723 -0.189 -0.189 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.538 -0.206 -0.208 0.000 0.000 -0.051 0.169 -0.215 -0.215 0.159 0.370 0.000 0.000 0.684 0.684 0.000 -0.212 0.000 0.000 -0.165 -0.165 -0.210 -0.210 0.000 0.000 0.190 0.190 0.390 0.390 0.161 0.723 -0.189 -0.189 0.000 6.420784 4.575506 4.014793 14.871761 9.952018 6.224245 8.190715 6.393303 10.274063 9.325858 6.393303 4.715229 9.518617 10.984609 11.751193 9.269347 11.020135 9.986909 9.407967 5.872772 4.014793 11.425666 3.216424 7.403669 8.043802 6.569380 9.877738 11.257727 11.551427 10.029927 8.605752 10.626185 7.361748 5.822146 11.485857 13.294866 9.338521 13.045527 6.780326 12.138912 5.726286 9.114928 3.447751 14.412626 6.393303 11.169103 9.994931 10.100131 10.327220 7.503435 12.379473 9.292776 8.837521 12.291962 10.773680 2.393306 1.277806 9.949661 10.173148 11.874015 12.366282 11.326085 8.690042 9.406249 12.214339 13.379856 7.681548 10.141496 10.477498 7.106491 11.4978007 11.5227838 -0.3072157 9.0046112 11.5545315 11.6104215 9.2778255 8.8789773 9.8520973 14.8717608 7.8998771 7.5320668 10.5709139 8.9407905 9.1594493 10.4998153 10.2997308 9.4897705 14.4414489 9.0282534 9.8659154 10.2349275 9.8279309 8.9932155 7.1563875 11.9327598 10.7086265 11.5308850 10.6295009 10.6787049 7.6013154 9.6808375 11.1298347 10.4066790 11.9845618 NA 8.5891953 9.8187542 9.7207689 9.0591852 13.0217482 9.1149276 6.8777381 9.2617691 8.3635194 9.6221214 9.9637423 8.6042548 10.8317747 10.2541509 7.5098462 5.6353771 8.3617477 0.2778658 9.6456042 6.2551060 11.2288673 9.3679378 10.0164807 9.8863883 NA 10.2276522 13.8866193 9.6109809 10.9123340 10.6401347 10.2927758 9.1033143 3.4477511 11.1128231 10.8934735 1.0147838 7.3185717 12.7934432 10.4237576 10.1420116 7.8552541 6.4807660 13.2866042 10.9473011 10.7941821 10.9162614 10.1359205 11.8974341 9.8221460 8.8789773 10.2095479 11.4620810 10.2075770 2.2778360 NA 8.4072457 4.8826871 13.3776664 10.1961918 9.4233332 0.2778658 9.3624035 10.1414955 0.2778658 9.2684021 7.8118043 12.2202178 5.2927744 9.3203969 TCGA-CI-6620 41 0 NA 184 rectum stage iva t3 n1 m1 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes NA NA white not hispanic or latino 139.38.0 NA NA 1 3 NA NA 2 2 3 2 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.375017 11.820532 12.356708 7.358754 9.877367 10.818812 -1.352179 -1.352179 10.989467 3.455307 8.525999 10.864997 10.113514 9.869396 9.777875 8.625228 0.0056030 0.0056030 -0.2471500 0.0094668 0.0102850 0.0102850 0.0102850 -0.0930060 0.0000000 0.0000000 -0.5615700 0.5255500 3.0602000 -0.0237400 0.0155870 -0.0027707 -0.0282180 -0.0220580 -0.0220580 -0.1019700 0.0036076 0.4520700 0.4520700 -0.0928740 -0.0503200 -0.0102170 0.0174040 0.0129340 0.0267950 0.0267950 -0.5201000 -0.5201000 -0.5201000 -0.2564600 -0.2471500 0.0094668 0.0336900 0.0686650 0.0102850 -0.0930060 -0.0272530 0.0000000 -0.5615700 0.0161460 -0.5274700 -0.5635500 -0.0027707 -0.0027707 -0.0282180 -0.0282180 -0.5863700 -0.5363200 -0.5363200 -0.1019700 0.0036076 -0.0178030 -0.0479360 -0.0928740 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 0.000 0.000 0.000 -0.564 0.000 -0.547 -0.547 0.000 0.000 0.000 0.000 0.000 0.448 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.520 -0.256 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 0.000 0.000 0.000 -0.564 0.000 -0.547 -0.547 0.000 0.000 0.000 0.000 0.000 0.448 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.520 -0.256 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.232910 4.837772 3.647948 15.159870 9.551076 4.692343 9.470519 -1.352179 8.861052 8.133777 6.074212 3.348388 9.246000 10.961114 11.879619 9.797695 10.847313 9.574985 9.307052 4.291802 4.291802 12.429717 -1.352179 7.082576 5.996676 6.965361 9.736073 10.575726 10.919994 9.245069 8.889931 11.071326 8.050960 5.590461 12.442262 13.434626 9.686181 13.038184 7.379267 12.356708 5.960831 11.399283 2.895884 14.324676 3.969878 10.881867 11.208758 9.737888 10.818812 7.461729 12.102890 8.935660 9.528297 9.452079 11.037310 1.647959 1.232906 9.938543 10.491476 11.792925 12.517060 11.158712 9.050960 9.255278 11.889037 13.680467 7.412820 10.499306 10.481629 8.249718 11.3705418 11.1282331 NA 9.3750173 11.6006890 11.8205315 9.3910992 9.2263204 10.0327315 15.1598702 7.9217434 7.3927819 9.7294313 7.7512354 9.8128547 11.1977324 10.8917168 11.0780422 14.4162872 8.6772351 9.9743772 9.4784628 9.7881384 8.1517736 7.1909792 12.2531957 9.9194107 9.7842980 10.3313811 10.5823758 7.8812321 10.0929626 11.3540120 9.5533348 12.4420275 NA 9.2460002 8.7616898 9.5889953 9.0721141 11.9023859 11.3992826 5.0229891 8.9653604 9.1277279 10.0710637 9.4569119 8.7018737 7.3203728 9.3910992 0.9698964 NA 7.4358502 -1.3521790 9.2159038 5.7247621 11.2368966 8.7655908 9.7727152 10.2745694 NA 10.8043469 13.8955786 9.1287380 10.9894666 10.5317365 10.0705381 9.4768776 2.9698780 11.2877407 10.8019746 -1.3521790 7.1196228 12.5357395 10.3999102 10.1073794 7.9743773 7.1477941 13.2178034 11.3061592 11.1604413 11.0552155 9.8693960 12.6014167 10.4544973 8.4374812 10.6452225 11.8463928 9.7778747 2.1073866 1.1282274 7.8311115 5.0402656 13.8922744 10.3630518 9.0284089 0.2329063 9.2206480 10.4993064 2.2329063 9.0294907 8.5059286 12.4792550 4.1073782 5.5548375 TCGA-CI-6621 63 0 NA 0 rectum stage iii t3 n1 mx 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes NA NA white not hispanic or latino 139.38.0 NA NA 1 2 2 5 2 2 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.328377 11.092192 11.634991 8.084871 9.685130 10.166401 1.658600 NA 11.177751 2.359043 8.353834 10.586754 10.025475 9.917249 10.140406 11.153962 0.2236000 0.2236000 0.0440070 0.4728900 -0.4366900 -0.4366900 0.4840600 -0.0679930 0.1493500 0.1493500 0.0000000 0.0000000 0.2294700 0.2294700 0.2294700 -0.3172700 -0.0370820 0.2199100 0.2199100 0.1710600 1.1412000 1.1412000 1.1663000 -0.0059522 -0.3756100 -0.3756100 0.2019800 0.1339100 1.1005000 -0.0310860 0.1165300 -0.3747100 -0.3747100 0.0440070 0.0440070 -0.3773000 -0.0598070 0.0421660 -0.4366900 -0.0679930 -0.0679930 0.1493500 0.0000000 0.0000000 0.0408920 0.0408920 -0.3172700 -0.3172700 -0.0370820 -0.0370820 -0.3967500 -0.3758300 0.7922000 0.1710600 0.2153000 -0.1111600 -0.4104700 -0.0059522 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 -0.317 0.000 0.000 -0.177 0.220 0.416 0.416 0.171 0.171 -0.376 -0.152 1.141 1.141 -0.111 -0.410 0.134 0.134 0.000 0.000 0.117 -0.258 -0.149 0.000 0.000 0.000 0.000 0.000 0.047 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 -0.317 0.000 0.000 -0.177 0.220 0.416 0.416 0.171 0.171 -0.376 -0.152 1.141 1.141 -0.111 -0.410 0.134 0.134 0.000 0.000 0.117 -0.258 -0.149 0.000 0.000 0.000 0.000 0.000 0.047 0.484 0.000 0.000 0.000 7.664231 5.868059 3.465961 14.610664 8.738091 3.944006 6.920701 1.828550 10.136870 9.328377 6.798158 4.787887 9.405121 11.057617 12.117525 9.580447 11.424100 10.155460 9.460315 7.142422 5.150458 11.953945 4.213192 6.630149 8.140405 7.302463 9.985036 11.404281 11.956526 10.269631 8.228462 10.770068 7.920701 5.033648 12.204295 13.543492 9.386527 13.211155 7.469178 11.634991 4.808354 9.785956 2.980537 14.520735 5.635885 11.913782 10.319939 10.200187 10.166401 8.262233 12.753591 9.585643 8.858279 11.734085 10.591559 2.746076 1.828550 10.317264 10.564745 12.130535 12.736423 11.236271 9.301560 9.578215 12.439454 13.225195 7.803264 9.833532 10.699923 7.568500 11.9133396 11.0887974 0.2435472 9.3283772 11.6209600 11.0921917 9.1967951 8.9794069 9.6600144 14.6106645 8.6387458 8.0401494 10.3685516 9.3033639 9.2806580 11.0613519 10.6638799 9.3148075 14.6430025 8.6809741 9.9370557 9.5677493 10.2189390 8.9358937 6.2733163 11.7218328 10.5703727 11.0656084 10.0748760 10.2284618 8.0455899 9.7885332 11.3996518 10.5602274 12.0284585 NA 9.1693704 9.2035707 9.9900831 8.3625098 12.4571793 9.7859557 6.4067985 8.6055125 9.0161584 9.8391370 9.9445863 9.3642386 9.7206525 8.8570513 NA NA 8.7671307 -0.3413543 9.2888735 6.1664001 11.6036842 9.0487751 10.4538342 9.9265633 NA 11.0216459 13.6785444 9.7050483 11.1777510 10.4485474 10.3689822 9.1524618 3.6586114 10.3350042 10.5285200 NA 6.6069737 12.5414403 9.7553214 10.4922870 7.5594727 6.4134942 12.5406761 10.3310316 11.1264665 11.0666706 9.9172488 12.3326882 10.1108475 8.6809741 10.1709616 11.3369863 10.1404057 0.6586457 0.2435472 8.7762234 5.7354220 13.8409618 10.4109869 9.4481399 1.4659745 9.0905007 9.8335320 9.9005894 7.8582788 7.3728520 12.2394537 5.3168191 8.0785666 TCGA-CI-6622 74 0 NA 212 rectum stage iib t4 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 139.38.0 NA NA 1 2 NA NA 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6791968 10.2466475 12.0180333 8.5899612 9.0144900 10.5382576 1.0837240 -0.2382041 11.2566802 0.7617959 7.8859458 10.3514757 9.8723080 9.0803787 10.4097327 10.9457701 0.00624810 0.00624810 -0.00277070 0.00097064 -0.01147300 -0.01147300 -0.01493900 -0.65438000 -0.00636680 -0.00810170 0.00194180 0.00194180 1.18940000 1.18940000 1.18940000 0.00903120 0.63226000 0.01363200 0.00504260 0.01409500 1.19470000 1.19470000 1.19470000 0.02918400 -0.65482000 0.00889200 0.00624810 0.00000000 0.00694350 0.00694350 -0.00235530 -0.00235530 0.00815040 -0.00277070 -0.00277070 0.00097064 0.00097064 -0.00440340 -0.02638700 -0.66003000 0.01251600 -0.00810170 0.00194180 0.00194180 0.00152550 0.00152550 0.00903120 0.00903120 0.63226000 -0.00110870 -0.65445000 -0.66309000 -0.66309000 0.01409500 1.19470000 -0.00277070 0.02244400 0.02918400 0.000 0.000 0.000 0.000 0.000 0.000 1.189 0.000 0.000 0.632 0.000 -0.654 0.000 -0.663 -0.663 0.000 0.000 0.000 0.000 1.195 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.189 0.000 0.000 0.632 0.000 -0.654 0.000 -0.663 -0.663 0.000 0.000 0.000 0.000 1.195 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.4483261 4.1541457 1.5691994 16.0562743 9.4829237 3.6687205 9.5300089 6.9614972 10.0535708 7.7979980 4.8703499 2.9317587 8.8988157 10.3779139 13.2257959 10.2304486 11.5202560 9.8164288 9.0109381 6.0564448 3.2853874 12.5257631 0.7617959 6.6321897 8.6762096 6.7391042 9.9355017 10.5196312 12.3550990 9.7348044 7.9317498 10.0983311 7.0656057 3.5167086 12.1895303 13.2440653 9.6236869 12.7041558 7.3048560 12.0180333 2.6687092 8.2912550 0.7617959 13.3518853 4.9906418 12.0316818 10.0735728 10.2691238 10.5382576 6.8492875 13.7862284 8.7490887 9.2466475 12.1844150 10.1199262 -0.2382041 -0.2382041 9.8143926 10.2932061 11.6808741 12.0810733 10.8846526 8.2853865 8.5167121 12.5162946 13.3443194 6.3911817 9.9007363 10.6194169 7.3087195 11.6760228 10.9317496 NA 8.6791968 11.4715546 10.2466475 8.7924916 9.2324835 8.4128763 16.0562743 7.7391048 7.3240671 10.2104572 8.9355016 8.2951545 10.8988157 11.2304486 9.3078604 14.6226933 8.2171517 9.6536082 10.2486596 10.5796077 7.2456402 6.0379488 11.5594861 10.1706850 11.1403904 10.3746931 9.9058455 9.9182110 9.5723963 11.2458922 10.2263703 12.6455800 NA 9.4448192 9.2140658 10.1243164 8.8936816 13.8050228 8.2912550 7.7730521 7.8252196 7.6717180 10.3349984 10.1122113 9.6903429 7.0971251 8.6626915 NA NA 6.3765352 NA 9.1083384 4.5947157 11.5947146 8.5431842 10.3019526 11.0509789 -0.2382041 10.4553115 14.0279889 9.7497991 11.2566802 10.4704774 10.2646564 9.0518435 4.0472243 10.6873790 11.0914135 NA 6.1193769 12.7365976 10.4978036 9.8696955 8.0938163 6.4760706 12.4484345 10.2656503 11.1736004 11.0443339 9.0803787 12.0621771 10.3168930 8.4812134 11.3751537 11.1113823 10.4097327 NA -0.2382041 8.2320769 6.3984496 13.8610491 9.9454599 9.4956874 NA 9.7284598 9.9007363 5.7160196 7.8962507 7.0927413 11.4402046 3.0097592 6.9115718 TCGA-CI-6623 44 0 NA 285 rectum stage i t1 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes NA NA white not hispanic or latino 139.38.0 NA NA 2 2 NA NA 3 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.886196 11.171046 12.045796 8.217568 9.669981 10.159066 2.668096 NA 10.619388 1.305562 8.313562 10.945004 10.161737 9.889959 9.783003 12.687849 0.3574100 0.3574100 -0.0304040 0.3334300 2.0315000 0.4975500 0.5206600 -0.0339500 0.3214100 0.3214100 -0.0156040 -0.0156040 1.4205000 1.4205000 1.2418000 0.3878300 0.1863100 0.3533200 0.0029133 -0.0044832 0.9375200 1.6951000 1.6302000 -0.3031400 0.0279190 -0.3759500 -0.3759500 0.0000000 -0.1459200 0.1936000 -0.0764120 -0.0764120 -0.0764120 -0.0304040 -0.0304040 0.3305300 -0.1264200 0.7064100 0.4873300 -0.0339500 -0.0339500 0.3103400 -0.0156040 -0.0252090 -0.3849300 -0.3849300 -0.3674800 -0.3674800 0.1863100 0.1780600 0.3533200 -0.3544200 -0.3544200 -0.0044832 0.9375200 0.1846500 0.1882800 -0.3031400 0.000 0.000 0.321 0.321 0.000 0.000 1.274 -0.385 -0.360 0.186 0.186 0.350 0.000 -0.354 -0.354 0.000 0.000 -0.376 0.329 1.695 1.695 0.185 0.188 0.000 0.000 0.194 0.194 0.000 0.000 0.000 0.000 0.333 0.333 0.706 0.706 0.487 0.487 0.000 0.000 0.326 0.000 0.000 0.321 0.321 0.000 0.000 1.274 -0.385 -0.360 0.186 0.186 0.350 0.000 -0.354 -0.354 0.000 0.000 -0.376 0.329 1.695 1.695 0.185 0.188 0.000 0.000 0.194 0.194 0.000 0.000 0.000 0.000 0.333 0.333 0.706 0.706 0.487 0.487 0.000 0.000 0.326 6.098091 5.331067 3.498174 14.323361 8.986019 6.452375 8.499587 5.127534 9.701527 8.576329 5.688004 2.305533 9.120231 10.386922 11.907570 10.077023 11.470441 9.500291 9.316761 2.305533 3.452371 13.011475 2.405067 5.707632 6.632606 7.886196 9.7655507 10.9647651 11.4172283 9.8246083 9.6996901 10.1732536 7.3279011 4.1706061 12.6301161 13.3218943 9.4355525 12.4258641 6.3310692 12.0457963 4.4050666 8.0585113 0.4981487 14.8262926 2.0831453 11.7480329 10.4581807 10.2265244 10.1590660 6.6731041 12.4281768 8.9390479 8.5094061 12.3981021 10.3573252 NA NA 9.6923200 10.2819955 11.7716830 11.5701438 11.4788539 9.1447375 9.0990208 12.8544931 13.7048879 6.9328065 11.1552738 10.8699554 6.7555659 11.29076570 10.51533508 0.08311123 8.88619589 11.55836800 11.17104604 8.83691508 8.94732747 9.54870768 14.32336089 8.22269252 8.10365814 9.48473188 9.39602416 8.51915855 10.33934987 10.12571257 9.48360802 14.86644645 9.26387925 9.96272455 9.04892547 9.98249810 7.75792198 5.12753424 11.63613047 11.06137497 10.67341641 9.50099381 9.96323496 7.66041883 10.51394221 11.36912133 9.57966214 12.04696453 NA 8.85682980 9.09993108 9.98601878 7.61711993 12.68452514 8.05851132 2.40506656 8.20381096 8.14923040 9.16173681 9.70945866 8.56341976 8.97795903 9.13480337 -0.50185127 NA 7.63772978 -0.50185127 9.38692193 5.23964626 11.39621323 9.75025275 9.43039359 9.97745381 -1.50185127 10.48045932 13.79956775 9.91497629 10.61938843 10.54802724 9.87755715 9.31115818 3.92444199 11.90770226 10.78413570 NA 5.11288775 12.40497540 10.90571206 10.19644930 7.11329314 5.72699738 13.21161895 11.20445890 11.41162920 10.77343027 9.88995929 12.23320580 9.97896895 8.29096896 9.83524307 11.24448312 9.78300279 NA NA 8.18185740 3.89049533 13.32477687 9.57098123 8.76613597 0.08311123 8.73313975 11.15527381 4.54257380 9.45962834 7.20553816 12.10643355 4.64792462 6.58032792 TCGA-CI-6624 53 0 NA 144 rectum stage i t2 n0 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes NA NA white not hispanic or latino 139.38.0 NA NA 1 1 NA NA 2 2 2 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3980048 11.3524554 12.4131989 8.2354518 9.0244119 10.9270406 2.0522420 0.4672795 11.1949043 2.5827487 8.6815867 10.3407116 10.4102706 10.4750282 10.0880983 11.9824745 0.2418700 0.1244500 -0.0364130 -0.0495710 0.2476100 0.3000900 0.3047200 -0.2188700 -0.1034300 0.3411100 0.1149000 0.1149000 0.7335800 0.7335800 0.7335800 -0.0132760 0.0430740 0.0949310 0.0949310 -0.1757700 0.3577200 0.3577200 0.8774500 0.0095764 -0.1674000 -0.1674000 0.2418700 0.0627040 0.0892210 0.0000000 0.1444300 -0.2126900 -0.2129400 -0.0364130 -0.0364130 -0.0495710 0.0814540 0.0689390 -0.4905800 -0.2188700 -0.4863900 0.3220400 0.1149000 0.0612100 -0.2022500 -0.4671800 -0.1896200 -0.0132760 0.0430740 0.0981120 0.0949310 -0.1973800 -0.1973800 -0.1757700 -0.4832400 -0.2046200 -0.4841400 0.0095764 -0.219 -0.219 0.219 0.322 0.000 0.000 0.734 -0.198 0.000 0.000 0.000 0.000 0.000 -0.197 -0.197 -0.131 -0.022 -0.199 -0.074 -0.182 0.176 -0.205 -0.136 0.000 0.000 0.000 0.000 -0.060 -0.204 0.000 0.000 0.000 0.000 0.522 0.000 -0.186 0.305 -0.196 -0.196 0.000 -0.219 -0.219 0.219 0.322 0.000 0.000 0.734 -0.198 0.000 0.000 0.000 0.000 0.000 -0.197 -0.197 -0.131 -0.022 -0.199 -0.074 -0.182 0.176 -0.205 -0.136 0.000 0.000 0.000 0.000 -0.060 -0.204 0.000 0.000 0.000 0.000 0.522 0.000 -0.186 0.305 -0.196 -0.196 0.000 7.2176951 5.2398563 4.7151960 15.7826524 9.4905597 4.3417367 9.6546196 5.4672664 10.6928766 9.4272695 6.8423063 4.4672664 8.9537672 11.0109438 12.3838934 9.9115921 12.0580104 10.3706472 9.1479200 7.5688059 5.1860845 13.0897769 0.8822909 6.2660088 8.8408575 8.2746223 10.391090 10.599553 11.437853 9.932834 7.993441 10.858153 6.937587 6.568806 12.945194 13.730390 9.874535 12.452754 7.176926 12.413199 6.969768 9.523454 3.689657 14.627218 4.789197 12.318105 10.834682 10.963123 10.927041 8.575792 12.716578 8.561785 8.718355 13.018976 11.354488 2.582749 2.789187 10.643856 10.372655 12.162641 12.802192 11.483611 9.336604 7.540516 11.845382 13.304961 7.111123 9.977702 11.035540 7.856719 11.4651526 11.0128755 -0.1176308 9.3980048 12.2461659 11.3524554 9.4794264 9.2660092 10.1069037 15.7826524 8.5494166 8.2831842 9.5792726 9.1561005 8.8837131 10.4974748 11.4488347 8.7766982 14.4223724 8.3273200 10.0844288 9.8211494 8.9763825 7.5896639 8.4078256 11.2954040 10.6119257 11.5999814 10.1929177 9.6438562 7.6982963 9.8942310 11.6759083 10.1642349 12.3326489 NA 8.6636648 8.8949296 10.2895727 9.6136239 12.8661002 9.5234536 7.7557489 8.5369411 9.4407257 10.2562576 10.1349704 8.4535645 8.7951942 9.1906440 1.8822909 NA 8.0893191 -1.1177874 9.4997724 5.7024830 11.1017761 9.6537945 10.1153254 10.1572654 0.4672795 10.0721295 13.5691337 9.4493102 11.1949043 10.0634572 10.1815129 9.4914838 5.4368947 10.0345898 11.1492203 0.4672795 7.6438562 12.3591777 9.4914838 10.4141737 7.3543049 6.7831711 12.0955611 10.7752272 11.7886319 10.3886125 10.4750282 11.2324154 10.4974748 8.4272693 10.2741661 11.1201125 10.0880983 4.4970119 2.6896570 7.8225014 4.4058699 13.4705511 10.1774999 9.5723029 -1.1177874 8.2803217 9.9777019 1.8822909 8.9294289 7.4597341 11.6048990 4.4672664 7.8277485 TCGA-CL-4957 79 0 NA 425 rectum stage iiia t3 n1 m0 25-9-2014 female 2008 425 NA rectal adenocarcinoma yes NA 2 NA hispanic or latino 122.34.0 NA NA 1 2 NA NA 3 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.962245 11.377282 11.978688 8.503863 8.782442 10.076268 1.123070 NA 11.109594 3.625539 8.007720 10.482425 9.522497 9.153681 10.067509 11.876676 0.00524280 -0.00543110 -0.00026070 0.00802460 0.00247080 0.00247080 0.01863100 0.00955620 0.40857000 -0.47366000 0.08374200 0.08374200 0.89543000 0.89543000 0.44067000 0.00000000 0.09764000 0.00052264 -0.35376000 -0.10345000 1.01270000 1.01270000 1.29590000 -0.03806500 -0.00888440 -0.49279000 0.03859700 0.00163230 0.02691100 0.47188000 -0.01601900 0.00802460 0.05833400 0.00079999 -0.00026070 -0.00515460 -0.03084500 0.09112200 -0.99712000 -0.36456000 0.03168500 -0.47239000 0.08374200 0.08178700 -0.46602000 -0.48336000 0.02549800 0.03041800 0.09764000 0.09764000 -0.50061000 -0.97382000 -0.97382000 -0.10345000 1.01270000 -0.46347000 -0.51879000 -0.03806500 0.000 0.000 0.000 -0.396 0.000 0.000 0.414 -0.483 0.000 0.000 0.000 -0.425 0.000 -0.496 -0.974 0.000 0.362 0.000 0.000 1.013 1.296 -0.483 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.993 0.000 -0.469 -0.469 0.000 0.000 0.000 0.000 -0.396 0.000 0.000 0.414 -0.483 0.000 0.000 0.000 -0.425 0.000 -0.496 -0.974 0.000 0.362 0.000 0.000 1.013 1.296 -0.483 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.993 0.000 -0.469 -0.469 0.000 5.345432 4.468818 3.396064 15.649825 9.450219 6.029932 9.083043 3.895632 10.367405 8.130536 5.210506 2.997509 8.506746 10.715498 12.371661 10.068485 11.628687 9.986195 8.743872 6.061640 2.786011 11.651332 -1.461959 6.795467 6.444968 6.560446 9.3654213 11.0643333 11.8783460 10.0655556 8.9799853 10.4351678 7.6334755 4.9810215 12.3994563 13.2396017 9.8464176 13.1321116 6.6308364 11.9786883 3.8600093 8.3991655 0.1230040 14.1370616 6.1747040 12.9961648 9.7463129 10.0684849 10.0762675 6.1601296 11.9785585 8.6188960 8.9432201 12.2274215 10.7334508 NA 0.5380415 9.8779286 10.4595477 11.7883770 12.4772905 11.0873820 9.3606494 9.0897868 12.2699279 13.4134920 7.1527888 9.9887744 10.2171188 8.1435582 11.8187044 11.9219179 -0.4619585 8.9622448 11.2540406 11.3772824 9.1314696 9.6400542 8.2245791 15.6498249 8.4614062 8.0036450 10.0772374 7.2829123 8.9432201 10.5892876 10.7257400 10.2392031 14.8150390 9.2463002 8.9410908 9.7511828 9.7086296 9.6922638 5.9217838 12.3566608 11.0171010 11.3126598 10.2710939 10.3586565 8.5282677 9.5338458 10.7695999 10.2749033 12.0026205 NA 8.8967299 9.5081341 10.0127985 8.1927145 13.3734382 8.3991655 6.8956310 7.6041677 7.9851617 10.1173945 9.7554306 8.9389579 10.2019212 8.3308689 -1.4619585 NA 8.1267933 0.1230040 9.5153584 5.5267637 11.6765104 9.2428468 9.5933611 10.1486421 1.1230702 10.8019346 13.9891931 8.7692997 11.1095943 10.4846194 10.3937257 8.6347936 3.8956322 9.6007994 9.2840386 1.5380911 5.9131192 13.0270484 9.1088830 9.8939802 7.8052634 4.9131192 13.2929661 11.5581904 10.5984368 11.2510354 9.1536807 12.2665306 10.2753259 8.9517064 11.0718950 11.5424747 10.0675091 -1.4619585 NA 8.7368920 6.3324949 13.5189322 10.0354315 8.5296004 NA 8.9446450 9.9887744 NA 7.1564644 8.0616407 12.0394182 5.0458754 7.5520988 TCGA-CL-5917 71 0 NA 1826 rectum stage iiic t3 n2 mx 25-9-2014 female 2006 NA NA rectal adenocarcinoma yes rx NA white not hispanic or latino 102.35.0 NA NA 4 2 NA NA 3 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.436066453 11.286420474 12.140722363 8.537051403 8.894461895 11.582440042 2.898982227 -0.007956724 11.175412136 4.451521052 9.025510019 10.485442023 9.844616486 9.730246795 10.171996011 12.011851380 -0.01407900 -0.01935600 -0.02698800 -0.01211800 1.55200000 1.55200000 1.63970000 -0.01188700 -0.00456950 -0.00456950 1.09900000 2.04260000 1.53470000 1.53470000 1.44610000 -0.00609040 0.65756000 0.03721700 0.03721700 0.06007900 2.29810000 2.29810000 2.73180000 0.08724500 0.05879500 0.02829000 -0.01407900 0.59501000 0.00610900 0.97482000 -0.01009400 -0.02630400 -0.02630400 -0.02698800 -0.02698800 0.04471500 -0.01211800 0.63810000 -0.74290000 -0.01188700 -0.01188700 -0.01409000 1.09900000 -0.03080200 0.00000000 0.00000000 -0.00609040 -0.00609040 0.65756000 0.02988800 0.03721700 -0.72195000 -0.72195000 0.06007900 -0.03299600 -0.00097017 0.07297100 -0.28323000 0.000 0.000 0.000 0.000 1.098 0.000 1.535 0.000 0.000 0.658 0.658 0.000 0.000 -0.722 -0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.569 0.569 0.000 0.969 0.000 0.000 0.000 0.000 0.000 0.000 0.638 0.638 -0.660 0.892 0.000 0.000 0.166 0.000 0.000 0.000 0.000 1.098 0.000 1.535 0.000 0.000 0.658 0.658 0.000 0.000 -0.722 -0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.569 0.569 0.000 0.969 0.000 0.000 0.000 0.000 0.000 0.000 0.638 0.638 -0.660 0.892 0.000 0.000 0.166 5.079548784 4.850069292 3.577054132 14.792910497 9.873200926 8.181911553 10.127796146 -0.007956724 9.988560434 8.343026222 5.862451391 2.799439645 9.056829791 11.317673485 12.545596222 10.417302857 11.823592106 10.895592246 9.597566370 9.392966275 3.850069292 13.006456157 NA 5.079548784 5.664511284 6.856273625 9.5994173 11.2289981 12.7030010 9.8547243 7.8929538 10.7157479 6.9462829 3.5770541 11.4801781 13.1353904 9.5779884 13.1757223 7.2059691 12.1407224 2.4515145 9.2459344 1.3140004 15.0633188 5.7865023 11.4075646 10.8277426 11.2745962 11.5824400 7.0088947 13.0541331 8.3671264 9.1265132 7.4678207 11.0950468 0.9921158 1.7994604 9.6223541 9.8414920 11.8585931 12.6297307 10.6390956 8.6857307 9.8407098 12.7547804 12.9225471 6.7668734 11.2530064 11.3294301 8.2184993 11.505074242 10.955705551 0.577054132 9.436066453 12.098976963 11.286420474 10.036481080 9.763576398 9.469845286 14.792910497 9.113620547 8.542833775 8.990677240 7.963630754 9.210044701 10.698151180 10.853561576 9.223404207 13.853852355 9.082199348 9.589208440 9.201540259 9.872435719 7.599417481 2.898982227 11.941731257 11.367126347 10.160132234 9.711475806 9.662743134 8.613259796 9.709763288 11.333049661 10.147537699 11.759021599 NA 8.776721872 8.449467695 10.186228165 6.692526235 13.334300510 9.245934364 7.331937157 9.063549320 8.628711635 9.414151604 10.115561705 9.088802016 6.599417481 10.333049661 4.969366949 4.240016600 7.809070322 -0.007956724 9.008895251 4.824976555 10.853561576 9.464777706 9.927252038 10.055482013 NA 10.303835191 14.025940048 9.041935345 11.175412136 10.680337193 9.561942595 9.087484057 5.451517755 9.957871225 9.547989374 -1.007811664 3.515649382 12.603918633 9.557188922 10.169506409 7.805868309 6.671566541 12.928540822 10.452542826 10.788532214 10.818635379 9.730246795 11.758201682 9.623264053 8.261213451 10.799844341 10.598954787 10.171996011 NA 0.577054132 6.919806046 6.584544660 13.968382528 10.472877129 9.324123378 NA 8.733402136 11.253006436 9.550507663 8.103222755 8.154478403 12.534151455 3.314014891 7.295868095 TCGA-CL-5918 90 0 NA 243 rectum stage iia t3 n0 mx 25-9-2014 female 2008 NA NA rectal adenocarcinoma yes rx NA white not hispanic or latino 102.35.0 NA NA 3 3 2 5 3 1 3 2 4 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.9225779 10.7843803 12.3745718 8.4588557 9.0340319 9.8044458 5.7045317 NA 11.0115756 0.7196654 7.5483033 10.9836891 9.8566286 9.1332655 10.1611984 11.0245592 -0.0629900 0.0000000 -0.7015400 -0.0069195 0.5625000 0.5625000 0.6404800 -0.0074720 -0.0059522 -0.0059522 -0.0342230 -0.0342230 0.6155900 0.6155900 0.6155900 0.1872200 0.0188030 0.0545180 0.0354250 0.0339720 2.1922000 2.2064000 2.2064000 0.0744080 0.0211830 -0.0629900 -0.0629900 0.3117000 0.0663280 0.0391950 -0.0055375 -0.0055375 -0.0055375 -0.6953200 -0.7015400 -0.0069195 -0.0069195 0.6513000 0.5625000 -0.0074720 -0.0074720 -0.0059522 -0.0342230 -0.0342230 -0.6312100 -0.6350700 -0.4710900 -0.4710900 0.0188030 0.0188030 -0.6794900 -0.6834200 -0.6834200 0.4181400 -0.0309500 -0.0604800 0.0172640 0.0744080 0.000 0.000 0.000 0.000 0.000 0.000 0.616 -0.635 -0.471 0.000 0.000 -0.642 0.000 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 2.206 0.000 0.000 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.670 0.562 0.562 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.616 -0.635 -0.471 0.000 0.000 -0.642 0.000 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 2.206 0.000 0.000 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.670 0.562 0.562 0.000 0.000 0.000 5.3441290 4.9926551 0.1346152 14.9787670 9.3634937 4.5941066 6.2221380 9.4756378 9.8978873 9.1611984 4.7493841 4.3441254 8.5440661 10.6255258 12.8711827 9.7685784 11.5677388 9.4633498 9.0859597 1.7196216 1.9420453 12.9318299 2.5941185 6.8489208 5.6104077 6.8761424 9.1817990 11.3619901 12.7928865 9.5869163 8.3343475 9.7243261 6.7121032 3.3045987 12.9155223 12.9447445 9.8115136 12.6800015 6.1004584 12.3745718 2.5941185 6.9738787 NA 13.6810872 6.3244992 12.9178779 10.7893110 9.7521424 9.8044458 5.5609411 12.2266062 8.6503747 7.7345877 7.9988612 9.9404189 0.1346152 NA 9.3991177 10.0460670 11.4700654 13.3283544 10.6210072 8.7233896 9.9926560 12.4121077 13.0108082 7.0355414 9.8786679 11.1722220 8.4678305 11.1219390 10.9976997 -0.8653848 7.9225779 11.4338830 10.7843803 9.0004082 8.7438539 9.3170693 14.9787670 9.4611045 8.9209447 10.2888602 8.2587964 9.0157889 10.4350275 10.6370096 8.8526256 14.6060327 10.0355418 9.6474154 9.6174829 9.6873442 8.3586767 2.5941185 12.0071575 11.2815618 10.9723029 9.9620177 9.9201274 8.4805903 10.0639334 11.4722969 8.9242086 11.8993040 NA 9.1994179 8.6718934 10.2068077 5.7785319 13.3461071 6.9738787 5.9548547 7.6385011 6.1233599 9.0917770 9.2287528 8.3401750 7.3967700 9.4189209 NA -0.8653848 8.2168239 1.9420453 8.5097144 5.1119536 12.2888602 8.6950080 9.8237993 9.9980870 1.9420453 11.2493934 14.1268167 9.8141551 11.0115756 10.5307446 9.8987172 7.5053622 5.6265267 11.4764718 10.5136093 NA 1.9420453 12.7055980 10.2353373 10.3802277 7.4437417 5.2639583 13.6258392 11.0004083 10.2267714 11.0676279 9.1332655 11.8807694 10.8608931 8.4061382 10.3831956 12.0417535 10.1611984 -0.8653848 NA 8.0744305 5.6424705 13.5937223 9.7703932 8.1205168 NA 8.6380833 9.8786679 1.1346810 8.5651276 8.0654124 11.9548540 4.0888709 4.1346727 TCGA-DC-4745 49 0 NA 334 rectum stage iiib t3 n1a m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 1 white not hispanic or latino 122.34.0 NA NA 3 2 3 6 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.1204178 9.8915065 11.3490471 7.5888510 8.7564956 9.8873429 -1.1322616 0.4527009 11.0482830 4.7746448 8.2186916 10.3720746 9.5357507 9.6650246 9.5472323 8.2120479 -0.0280910 -0.0280910 -0.0824430 3.0138000 -0.0361390 -0.0761810 0.6489000 0.3590300 0.0348080 0.0742540 -0.0638470 -0.0265870 0.8762600 0.8762600 0.8667000 -0.1605300 -0.0685390 -0.0675520 -0.0013839 0.5882800 1.3313000 1.3313000 1.3369000 2.3040000 -0.0656490 -0.8952700 -0.0280910 0.7040000 0.5468100 0.5572500 -0.0440720 -0.0498400 -0.0549690 -0.0541600 -0.0824430 -0.1415600 0.0623550 0.0332570 -0.8758800 0.3590300 0.1683400 0.0742540 -0.0265870 -0.0817470 -0.0260400 -0.8183600 0.2451200 -0.1605300 -0.0685390 -0.0794270 -0.0619670 -0.8393000 -0.8693200 0.5882800 1.3313000 -0.7909300 -0.2331300 -1.1195000 0.359 0.359 0.000 0.000 0.000 0.000 0.867 0.000 -0.161 0.000 0.000 0.000 0.000 -0.838 -0.838 0.371 -0.217 0.000 0.000 1.337 1.337 -0.133 -0.233 0.562 0.000 0.539 0.539 0.000 0.000 0.000 0.000 0.000 0.000 1.867 1.867 -0.800 0.000 1.363 1.363 0.132 0.359 0.359 0.000 0.000 0.000 0.000 0.867 0.000 -0.161 0.000 0.000 0.000 0.000 -0.838 -0.838 0.371 -0.217 0.000 0.000 1.337 1.337 -0.133 -0.233 0.562 0.000 0.539 0.539 0.000 0.000 0.000 0.000 0.000 0.000 1.867 1.867 -0.800 0.000 1.363 1.363 0.132 6.9710400 4.4527140 3.4527140 14.8401920 9.1001732 2.9552198 7.7806415 6.7625694 11.2824374 8.9459029 5.7746421 3.3271843 10.5677584 9.9532246 11.2811157 9.5931184 10.8018116 9.1726738 7.2643572 6.1061578 3.1896823 11.5102552 0.4527009 6.5819974 8.0124106 8.8761808 9.2208990 10.2755511 12.0764438 8.2664961 7.9710400 9.0820713 7.5259639 5.1896823 12.1323414 12.5284167 9.5419446 13.0736218 5.7006422 11.3490471 4.0376809 8.2208992 0.8677384 14.1642024 5.7984886 12.7889423 9.2175863 9.5931184 9.8873429 7.2253039 11.9548835 7.9011752 8.2186916 7.4676650 9.3952293 1.6750933 0.4527009 8.9644674 10.2148198 11.3648555 12.5873549 11.0098593 7.9970355 8.7101025 11.0149572 13.2798589 7.7411966 9.3565966 10.1981089 8.4602093 11.6270163 10.6763142 0.8677384 8.1204178 11.0120918 9.8915065 7.8677519 9.0034614 8.0225703 14.8401920 9.0772056 7.0426783 9.4156108 8.4069112 9.1772287 10.7148095 10.8025488 9.9569576 13.8758744 8.9525607 8.5888514 10.1079473 12.0084222 8.4451808 6.1986690 12.5731686 10.8705672 11.5503079 8.6507506 9.0501466 7.9863558 9.8270297 10.7810156 8.5098039 12.6389889 NA 9.1908069 8.0451715 9.8080658 7.6943008 12.4261729 8.2208992 4.7503975 7.9578647 7.4107837 9.7108880 9.3322980 7.7818980 6.6879313 7.9257437 NA NA 6.1251407 NA 9.8852566 5.3434860 12.0387726 8.4676650 9.5401775 9.3002942 1.4527009 10.8578562 14.1713903 9.0288840 11.0482830 10.6783238 9.4156108 9.1321948 4.9121468 9.6400668 10.1344919 NA 4.8450333 12.4703351 9.3373940 10.7093166 7.3066687 5.8564380 13.3786400 11.5864991 11.6472664 11.6996532 9.6650246 11.4107840 10.5290850 8.0551045 11.2087150 10.8814238 9.5472323 NA NA 8.9466636 4.2940178 13.9945776 9.2929681 7.8873431 1.4527009 9.1243501 9.3565966 8.4470683 7.3353582 7.5330883 11.8482488 4.7006395 5.9762766 TCGA-DC-4749 57 0 NA 335 rectum stage i t2 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 3 2 2 5 3 1 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.6834880 10.1678064 11.5364319 7.3960481 9.2808076 10.1409439 1.6297529 -0.1775554 10.5545685 0.8223631 7.5366466 10.4626460 9.7194901 9.6481390 10.1301712 11.5507468 0.47686000 0.45900000 -0.00086988 0.02086400 -0.00183960 -0.00183960 0.39275000 -0.01825400 0.46378000 0.45026000 -0.05337900 0.01783300 0.50129000 3.65690000 0.55899000 -0.02483600 0.87882000 -0.03944000 -0.03944000 0.34189000 2.21100000 2.95290000 3.01480000 0.01443100 -0.61073000 -0.57028000 -0.55382000 -0.01649500 0.00495810 0.02900500 0.55296000 -0.51177000 -0.52888000 -0.01261400 -0.03976600 -0.04192400 0.02086400 0.60047000 -0.43488000 -0.04087900 -0.05094800 0.45747000 -0.55078000 -0.01156500 -0.55950000 -0.55950000 -0.02483600 -0.02483600 0.85378000 0.87882000 -0.59254000 -0.55760000 -0.55760000 -0.62067000 0.47285000 0.03365100 -0.11107000 -0.01852800 0.000 0.000 0.457 0.457 0.000 0.000 0.521 -0.559 0.000 0.879 0.879 -0.528 0.000 -0.558 -0.558 0.323 0.323 -0.081 0.459 0.473 2.888 0.000 0.000 0.000 0.000 0.000 0.000 0.457 -0.495 0.000 0.000 0.000 0.000 0.600 0.600 -0.417 0.000 -0.546 -0.546 0.000 0.000 0.000 0.457 0.457 0.000 0.000 0.521 -0.559 0.000 0.879 0.879 -0.528 0.000 -0.558 -0.558 0.323 0.323 -0.081 0.459 0.473 2.888 0.000 0.000 0.000 0.000 0.000 0.000 0.457 -0.495 0.000 0.000 0.000 0.000 0.600 0.600 -0.417 0.000 -0.546 -0.546 0.000 5.3142542 4.8667943 -0.1775554 14.4524392 8.1398138 6.0318539 7.8195807 1.8224038 11.0485121 9.1170217 4.3769918 3.4073663 9.4490227 9.8797159 11.5988341 9.7700380 11.5110885 8.9810106 8.4260274 7.6070358 2.7292917 13.1142193 0.8223631 7.1930887 7.3576760 8.3750703 9.7641822 11.0269722 12.4565315 9.3052090 8.4626458 9.6912236 7.5435005 4.8223987 12.3921380 12.8470213 9.4083026 13.0364925 6.9204327 11.5364319 4.2486639 8.4823970 1.9923334 15.3736137 4.4662551 13.0310927 9.4832884 9.8972115 10.1409439 6.5772883 12.3597408 8.9465224 8.1238974 7.4036018 10.1129960 -0.1775554 1.8224038 9.9549008 10.4895126 11.4476533 12.0108354 11.8923543 9.3321760 9.8797159 12.5104328 13.9456738 7.2232806 9.5554164 11.1138596 7.4444526 11.3104922 11.0894803 2.6297529 7.6834880 11.2251467 10.1678064 8.6989182 9.2920430 9.1600118 14.4524392 8.2211448 7.3922565 10.4761419 8.8053947 9.3941538 10.1919984 10.8554798 9.7569544 14.6371087 9.1204637 8.8530681 10.6012996 9.5772885 8.8763269 5.9309265 12.1472848 11.0291102 11.6803821 9.4895126 10.1583497 8.5449011 10.0886020 11.2017795 8.8558240 11.8289200 NA 8.3903573 9.1611374 9.7619803 7.5400777 12.2549430 8.4823970 7.5332075 7.5638682 6.9923266 8.5604933 9.8280257 8.4644526 8.0269721 8.6216827 NA NA 6.7172185 -0.1775554 9.8110858 3.9098595 10.6369835 8.6989182 9.3528075 9.2653445 -1.1775554 10.2950920 13.4582325 9.7164609 10.5545685 10.5701745 10.2935682 9.1330137 2.9923334 9.8082430 10.8037828 NA 6.0703292 13.1967614 10.0691417 9.9426390 7.2360285 5.7050434 12.3009179 11.1152978 12.1257537 10.6070359 9.6481390 10.6799934 10.5215397 8.0750667 11.5130539 11.2978812 10.1301712 NA NA 8.6147198 6.3998290 14.0560207 8.9374447 7.9619526 NA 8.8845146 9.5554164 8.0891877 8.0047952 7.6103036 11.9457142 3.7292917 4.7050434 TCGA-DC-5337 69 0 NA 457 rectum stage i t1 n0 m0 25-9-2014 male 2010 304 NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 102.35.0 NA NA 1 1 1 2 3 1 3 2 1 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.728138 9.704085 11.201726 8.182704 8.451298 10.320081 2.335826 NA 11.278987 2.487821 7.385064 10.359421 10.206185 9.995840 9.732901 11.534402 0.00083195 0.00083195 0.00000000 0.00249690 -0.00719580 -0.00719580 -0.00719580 -0.00788630 0.78891000 -0.00609040 0.00000000 0.00000000 0.11081000 0.11081000 0.11081000 -0.01615400 -0.02397700 -0.01670400 -0.01106000 -0.00802440 1.41530000 1.36200000 1.41010000 -0.01078400 0.00083195 0.00083195 0.00083195 0.00861350 -0.53388000 0.00805670 0.00875280 0.00875280 0.00875280 0.00000000 0.00000000 0.00249690 0.00249690 0.00944910 -0.04170200 -0.00788630 -0.00788630 -0.01548800 0.00000000 0.00000000 -0.01006300 -0.01006300 -0.01615400 -0.01615400 -0.02397700 -0.02397700 -0.01670400 -0.20921000 -0.20921000 -0.00802440 1.41530000 -0.01972600 -0.02753500 -0.01078400 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 0.000 0.000 1.415 1.415 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 0.000 0.000 1.415 1.415 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.345804 4.023876 1.973244 15.055874 7.284837 7.036260 7.787948 9.876702 10.856330 10.354484 5.048537 4.689456 10.040109 9.230638 11.995222 9.050066 11.270494 8.974860 7.274420 5.231985 1.487846 12.678636 4.295179 6.960311 9.267871 8.353248 8.8330071 9.9900589 11.7195249 8.8680681 8.4810450 8.9521652 7.1993190 4.9472547 12.6847946 12.8947727 9.0697773 13.5365830 6.9140885 11.2017257 3.9732531 8.2400371 0.7508637 14.1408031 4.9732485 13.1741491 8.7108601 9.3445605 10.3200808 6.8732546 12.2642567 8.3181803 8.0485386 12.2513680 9.4244617 NA 1.1658798 9.1460353 10.1938016 11.4909199 12.1111565 11.8545830 7.4833079 8.6129787 11.3541754 13.5515558 7.7204844 9.0347181 10.1958729 7.6776485 11.4745190 10.6806096 NA 7.7281382 10.2652434 9.7040845 8.5344021 9.2848366 8.1993185 15.0558743 8.1142629 7.1545802 10.0106014 8.1771230 9.6537356 9.5101915 11.8405292 9.7788193 15.2473998 8.9619352 8.0113855 10.1258975 10.2848367 9.2874291 5.2102914 12.6756706 10.7247946 11.9092574 8.7806054 9.1545802 8.0441613 9.6314619 10.7319496 10.2279417 11.8402556 NA 8.3408213 8.6314619 9.5024022 7.3898972 12.7243163 8.2400371 7.7508584 6.7658079 5.8241059 9.1084100 9.8541459 9.1316798 9.3898974 8.3507708 NA NA 7.3207139 -0.8341845 9.9090470 5.4696776 11.6776483 9.4639581 10.0892231 10.3028867 0.1659441 9.8321196 13.8624828 8.9257838 11.2789866 10.3747396 9.9603114 8.6294200 3.0727918 10.2776833 9.8341158 NA 4.9472547 12.9488938 10.2427112 10.3649544 7.4232832 4.2102875 12.0154962 11.1219086 12.0637411 11.2457137 9.9958402 10.8232140 10.0347181 7.7508584 10.0712826 10.9365595 9.7329009 2.3358262 NA 9.0448200 5.4138242 14.1169070 9.2413747 8.3028865 NA 8.3532726 9.0347181 NA 8.1374390 7.8383209 11.8715280 3.9207792 4.5921580 TCGA-DC-5869 62 0 NA 395 rectum stage iiib t3 n1a m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 1 black or african american not hispanic or latino 102.35.0 NA NA 3 1 3 3 3 1 2 2 1 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.54633232 10.05876321 11.55537900 8.01167509 9.00491762 10.27414749 1.27022991 -1.05169819 11.34942604 -0.05169819 8.19620719 10.35448489 9.61893604 9.91642828 9.22789050 12.37951629 -0.2105700 -0.1892200 -0.3072100 0.5086300 -0.2688900 -0.2688900 0.4126200 -0.0123000 0.9915600 0.3179100 -0.0730760 -0.0730760 0.5355500 0.4935600 0.5190900 -0.2986300 0.1434400 -0.0403580 -0.0403580 -0.1527200 1.7272000 1.6997000 1.6997000 0.0666160 -0.3103300 -0.3103300 -0.2105700 0.2933400 0.2970400 0.2970400 -0.2568500 -0.2568500 -0.2568500 -0.3072100 -0.3072100 0.5086300 0.4952800 0.3283400 -0.2688900 -0.0123000 -0.0035703 0.3179100 -0.0730760 -0.0730760 -0.3417100 -0.3417100 -0.2986300 -0.2986300 0.1586100 0.1434400 -0.0403580 -0.7049600 -0.7049600 -0.1527200 1.7366000 -0.0344950 -0.1235500 0.0122140 0.000 0.000 0.324 0.324 0.000 0.000 0.466 -0.342 -0.299 0.143 0.143 0.000 0.000 -0.705 -0.705 -0.153 -0.153 -0.211 -0.211 1.700 1.700 0.000 -0.124 0.293 0.293 0.297 0.297 -0.257 -0.257 0.369 0.062 0.495 0.495 0.328 0.328 0.144 0.413 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.466 -0.342 -0.299 0.143 0.143 0.000 0.000 -0.705 -0.705 -0.153 -0.153 -0.211 -0.211 1.700 1.700 0.000 -0.124 0.293 0.293 0.297 0.297 -0.257 -0.257 0.369 0.062 0.495 0.495 0.328 0.328 0.144 0.413 0.000 0.000 0.000 6.3661316 4.4077130 1.7556140 14.3149084 8.1207076 7.1866848 8.9326984 6.3994907 9.6055984 8.0980268 5.3576716 3.1182102 9.8377839 10.0724011 12.0128543 9.4708614 12.0187363 9.3014267 8.6295184 7.2382987 3.7556354 12.1114578 1.2702299 0.5332643 4.6761997 6.4320959 9.3124145 10.7337323 12.1004063 9.3724461 8.1746920 9.4980645 7.2197426 5.0775635 11.8341669 12.6790684 9.1030979 13.5056239 6.3745440 11.5553790 4.7031672 8.7098310 2.5332394 14.5247938 4.4401350 12.3371044 9.5200324 9.8332135 10.2741475 7.0197419 12.9326984 8.3534212 8.2859020 9.0304291 9.6277600 0.9483018 1.7556140 8.9326984 9.7819606 11.4852555 12.2002060 11.2906324 8.4540916 9.0568043 12.0681937 13.1541495 7.7652636 9.3787325 10.1813004 8.0410370 11.06397386 10.24691525 -0.05169819 8.54633232 11.10436294 10.05876321 8.88049452 9.57490152 9.51623602 14.31490843 8.46791606 7.43612019 9.48743872 8.45409156 9.14057264 9.86042079 10.90647005 9.64770485 14.35159155 8.99403940 9.06592311 8.83397637 10.34702357 8.90828182 5.63477911 12.43159183 11.72861458 10.86937700 8.76526355 9.27807631 8.83776857 10.42198558 11.21623695 10.09612083 11.36870070 NA 8.15285116 8.27919686 9.31022377 7.13810486 12.06511117 8.70983099 6.90247642 8.51623582 7.94263355 8.84158133 9.95810853 8.22672912 9.97482411 8.72141914 6.27919640 -1.05169819 6.31460228 2.75563537 9.00491762 5.17710056 10.89152726 9.69731130 9.87457583 9.69311369 -0.05169819 9.70650310 13.82724082 8.77323846 11.34942604 10.76606298 9.61094823 9.69898693 4.75563537 10.58942850 9.33868536 NA 4.87901954 12.40193634 10.60425771 10.35395321 6.72333056 6.25205985 13.12780026 10.93731952 12.17860059 10.84158141 9.91642828 11.01504179 9.70400200 8.02242108 10.21857522 10.68721653 9.22789050 0.94830181 0.94830181 7.05769287 5.95950820 13.91487545 9.39742842 8.47771051 -1.05169819 8.99362993 9.37873248 -1.05169819 8.70816792 8.77958706 12.42843895 3.11821020 5.81864353 TCGA-DC-6154 57 0 NA 365 rectum stage iva t4a n2b m1 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 8 white not hispanic or latino 158.34.0 NA NA 3 1 NA NA 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.085519 9.790475 12.978626 8.046557 8.557641 9.794630 3.977564 -1.231752 11.076446 1.768121 7.828803 11.091443 9.384656 9.384656 9.803593 8.689948 -0.0059522 -0.0059522 -0.0400730 0.6424900 -0.0482070 -0.0482070 1.2757000 -0.0044312 0.5137100 0.5137100 -0.0042929 -0.0042929 1.2150000 3.6569000 1.1901000 -0.0120240 0.6684500 0.6106200 0.6749300 0.5062000 3.0757000 3.0757000 2.0870000 0.2172900 -0.7606400 -0.0059522 -0.0059522 0.5931400 0.0091705 0.0033299 -0.0089906 -0.0089906 -0.0162500 -0.0179410 -0.0400730 0.6424900 0.6424900 0.6995700 -0.0482070 -0.0066432 -0.0044312 0.5872200 -0.0042929 -0.0042929 -0.0074720 -0.0074720 -0.0189850 -0.0189850 0.6684500 0.6684500 -0.0579240 -0.7137200 -0.7137200 0.4730300 -0.7561600 0.0000000 -0.0294480 0.2172900 0.000 0.000 0.514 0.514 0.000 0.000 1.186 0.000 0.000 0.668 0.668 0.611 0.611 -0.714 -0.714 0.461 0.461 0.000 0.000 0.595 2.017 0.000 0.000 0.593 0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.659 0.659 0.000 0.000 0.000 0.000 0.217 0.000 0.000 0.514 0.514 0.000 0.000 1.186 0.000 0.000 0.668 0.668 0.611 0.611 -0.714 -0.714 0.461 0.461 0.000 0.000 0.595 2.017 0.000 0.000 0.593 0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.659 0.659 0.000 0.000 0.000 0.000 0.217 6.739651 5.996926 3.722302 14.365984 9.039570 5.779333 5.143144 2.575458 9.765992 8.860864 5.211051 1.938022 9.822711 9.588286 13.288419 9.633067 11.651514 9.507887 9.464205 10.061004 4.322693 12.018701 NA 1.768121 3.977564 7.198559 9.6423198 12.0832564 13.1460629 9.3828166 7.1431464 10.4938991 5.8870475 4.7453879 13.2792418 13.1303932 9.4056374 12.9635559 6.4823530 12.9786260 5.4546069 8.7164741 0.7680784 15.0366854 3.7223021 12.0378180 10.6817442 10.1316940 9.7946303 7.9848525 12.0388402 9.1721840 7.7904749 8.4892061 10.5782768 -0.2319216 NA 9.3246128 9.9696182 11.8962623 13.4668658 10.2544391 9.6104572 9.8727057 12.2084570 12.4984708 7.3379626 9.7939385 10.7726785 9.1322414 11.2778819 11.0293203 -0.2319216 9.0855195 11.6740579 9.7904746 8.9317566 8.9529823 9.8785902 14.3659836 8.4440641 9.0741685 9.1572004 7.8555699 8.3919885 10.8311648 11.5009102 8.2851266 14.4862115 8.6854791 9.4934730 10.3666246 10.5657683 7.2519226 2.9380411 11.2977814 10.7219395 11.0575494 10.0059143 9.7617528 9.3119989 10.0307889 11.3400964 9.7532371 12.4236957 NA 9.2519226 9.1245587 9.9127651 6.8870475 12.5030281 8.7164741 8.4615936 10.4694133 6.6929195 9.5120996 10.1162817 8.7918613 6.7223034 9.2418125 5.1256594 NA 7.4440641 NA 7.5527413 5.6507502 11.7946303 8.7553710 10.0172203 9.3596292 1.5754576 10.9326995 14.2657092 9.8588808 11.0764459 10.3116221 10.5437171 8.6854791 5.6384707 10.6780000 9.7849987 NA 2.8555712 12.9077381 9.4960273 10.0154410 7.3938160 4.6009952 13.3337445 10.4646398 11.1809413 11.4329985 9.3846558 12.1050318 10.6135968 8.7353330 10.2916688 11.4020103 9.8035932 0.3530974 NA 8.4266396 5.4960277 13.8699594 9.6033678 8.8635040 -1.2317521 8.4162486 9.7939385 7.6538031 8.3661591 8.5834901 11.8661389 3.5229973 7.5162997 TCGA-DC-6155 31 0 NA 425 rectum stage iiia t2 n1b m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 102.35.0 NA NA 1 2 3 6 3 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.343112 9.905484 11.262985 9.056659 8.477277 8.542618 2.460480 NA 9.897181 2.045443 5.669923 12.326975 9.157436 9.915796 9.510318 7.764250 0.20254000 0.20548000 -0.46179000 0.05066400 -0.42638000 0.55105000 0.82488000 -0.43302000 -0.42648000 -0.42648000 -0.41795000 -0.44715000 0.02061100 0.02061100 0.02061100 -0.41850000 0.04512500 -0.40673000 -0.40971000 -0.39420000 0.52957000 0.52957000 0.99964000 -0.13446000 -0.10001000 -0.10001000 -0.11823000 0.01858400 0.03342000 0.00290130 0.00068949 0.00068949 -0.02426200 -0.45544000 -0.46179000 0.05066400 0.00679230 0.00192970 -0.96761000 -0.44734000 -0.43302000 -0.44173000 -0.41795000 -0.93290000 -0.43204000 -0.43204000 -0.41850000 -0.41850000 -0.09592400 0.01881500 -0.40673000 -0.44701000 -0.44701000 -0.39420000 0.53132000 -0.45818000 -0.41621000 -0.16324000 -0.447 -0.447 -0.426 -0.426 -0.435 -0.435 0.000 -0.432 -0.419 0.000 0.000 -0.407 -0.407 -0.427 -0.427 -0.394 0.000 -0.118 0.084 0.531 0.531 -0.422 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.462 0.000 0.000 0.000 0.000 -0.542 0.393 0.000 0.000 -0.134 -0.447 -0.447 -0.426 -0.426 -0.435 -0.435 0.000 -0.432 -0.419 0.000 0.000 -0.407 -0.407 -0.427 -0.427 -0.394 0.000 -0.118 0.084 0.531 0.531 -0.422 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.462 0.000 0.000 0.000 0.000 -0.542 0.393 0.000 0.000 -0.134 4.460467 5.589752 NA 13.954950 8.972222 4.919903 7.936202 6.045432 9.818021 9.358314 NA 2.460480 10.836594 9.402983 10.821316 7.852787 11.432012 7.493892 6.869860 6.414665 2.045443 9.822413 NA 5.589752 8.075179 4.267820 9.637888 10.318450 11.649058 8.082521 7.215356 8.948309 3.460467 8.305959 12.304782 12.101166 7.960315 11.519137 6.015058 11.262985 5.886733 7.293359 NA 13.516937 3.919903 10.715497 8.235256 9.100714 8.542618 7.030325 12.172566 8.510318 7.075179 15.515497 9.241829 NA NA 8.139949 11.714316 10.226998 10.407375 11.887782 6.188389 7.045431 9.321556 13.714612 5.414667 8.299673 7.015058 9.093464 11.3658559 10.2203572 NA 7.3431120 9.9741966 9.9054837 10.2694331 8.3673597 6.2153563 13.9549495 8.6253757 6.8180210 10.2742501 7.9280748 7.0150582 10.4800597 9.1747145 7.4716963 16.4322819 9.9219483 6.8180210 12.7639643 10.2053028 8.9442848 6.5689928 11.5755126 9.4233649 12.8202185 9.7756185 10.8420119 8.6051272 8.0150576 9.1258048 7.5794102 11.4524371 NA 8.0073632 10.2266500 9.2581305 7.2418287 11.0898256 7.2933585 4.9199026 10.4117536 7.3673597 6.8003188 7.8180210 7.9116802 6.5897515 10.5585010 NA NA 9.8549316 NA 5.5048619 8.7596768 13.6135459 7.3431120 9.1917879 7.5689935 2.7823876 10.3184499 13.4899287 9.3461653 9.8971805 8.7131342 11.2128496 5.8180197 0.4604805 8.8398472 11.4037163 NA 7.3184497 14.4251708 8.9563239 9.7958593 9.0150579 3.2678204 14.2650033 10.7778816 8.8484862 12.4498634 9.9157962 11.0998096 11.6820560 7.0898254 7.9761688 10.2136857 9.5103175 3.0454255 NA 11.0626853 3.9199026 11.8014317 9.8484862 7.8441735 0.4604805 7.9280748 8.2996728 NA 4.4604674 7.8441735 11.7493350 2.7823876 5.1043241 TCGA-DC-6156 62 0 NA 457 rectum stage iva t4a n2b m1a 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 7 white not hispanic or latino 102.35.0 NA NA 2 1 1 2 1 1 3 2 1 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.269473 11.124525 12.052375 8.219485 8.825867 10.341882 1.255984 1.519039 11.454456 4.425936 9.289434 10.435423 10.585135 9.931164 10.421923 11.914758 0.207020 0.207020 -0.365900 0.230550 0.254020 0.254020 0.502210 -0.054151 -0.207590 0.407940 -0.090096 -0.090096 2.167300 2.167300 0.701550 -0.062764 0.013042 -0.010508 -0.010508 0.000000 0.494410 1.249900 0.594040 -0.155790 -0.329250 0.207020 0.207020 -0.779050 0.532570 0.489380 -0.367930 -0.366350 -0.366350 -0.373160 -0.365900 0.230550 0.230170 0.433110 -0.431160 -0.054151 -0.054151 0.407940 -0.090096 -0.090096 -0.087049 -0.087049 -0.065001 -0.062764 0.013042 -0.011749 -0.344000 -0.672510 -0.364200 0.030732 0.494410 -0.040345 -0.013072 -0.155790 -0.290 0.000 -0.208 0.200 0.000 0.000 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.694 0.000 0.000 0.207 0.207 0.574 0.574 0.000 0.000 0.236 0.236 0.489 0.489 -0.368 -0.368 0.232 -0.319 0.231 0.231 0.433 0.433 0.202 0.202 0.000 0.000 0.169 -0.290 0.000 -0.208 0.200 0.000 0.000 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.694 0.000 0.000 0.207 0.207 0.574 0.574 0.000 0.000 0.236 0.236 0.489 0.489 -0.368 -0.368 0.232 -0.319 0.231 0.231 0.433 0.433 0.202 0.202 0.000 0.000 0.169 9.254884 7.093954 4.425936 14.817990 8.873662 9.734983 10.034745 NA 10.814049 10.384263 7.788951 5.728500 8.752665 11.360610 11.935667 9.101501 11.341616 9.565260 9.511512 11.930910 6.317787 12.788854 5.143536 7.480978 2.934082 7.810600 10.055617 10.883180 11.466195 10.484830 7.959222 10.638851 6.754262 5.360347 12.298902 13.212968 10.183789 13.095215 7.334962 12.052375 8.682276 10.317787 1.255984 14.483086 4.792064 11.019887 10.598530 10.367669 10.341882 9.915650 12.781826 9.527474 8.317787 11.908498 12.051888 1.519039 1.934101 10.688553 10.177257 12.283226 12.106042 10.731745 8.687300 8.973002 12.006048 13.202625 7.088902 10.456174 11.354833 7.741438 11.56275644 10.78426995 0.93410128 9.26947340 12.40867628 11.12452511 9.39146401 9.43592024 10.09647442 14.81799046 8.43592024 8.77328693 9.47033024 9.61268331 8.93126258 10.79672047 11.52654012 8.70573778 14.27236681 8.20554598 10.57297150 9.24355936 9.69313896 6.77957360 5.34347534 11.02518781 10.33816019 10.61883173 10.15082899 9.82054182 8.43464616 9.54695155 11.90598581 10.45911446 12.08346822 NA 8.94391166 8.26051265 10.07427382 8.36662515 13.69781417 10.31778737 8.06850959 9.37391395 9.47421111 9.36139597 10.32854580 8.20554598 6.04260713 10.25713782 NA NA 8.86482036 -0.06597423 8.80290566 6.35193569 10.69895464 9.23672197 10.28391714 10.03999156 -1.06582322 10.40829598 13.48025409 10.08128796 11.45445620 10.95645087 9.66625046 9.56616956 4.51904490 10.59184816 10.44198179 NA 5.14353628 12.13620690 9.68980531 10.82738463 7.27393264 7.38116655 12.36923243 9.70309447 10.88609626 10.93689812 9.93116373 11.58019171 9.67470710 9.11647731 10.94005844 10.36558068 10.42192312 -0.06597423 1.74144541 8.08809123 6.49632493 14.20280782 10.66242877 9.65432741 -0.06597423 8.65246176 10.45617420 2.51903861 8.21717157 6.93408358 12.55670693 4.76697142 7.39351488 TCGA-DC-6157 48 0 NA 1095 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 black or african american not hispanic or latino 102.35.0 NA NA 3 1 3 6 3 1 3 2 1 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9964582355 10.7740658612 12.3767605129 8.2376836894 9.4118486366 10.2394739438 3.5842409728 -1.0005771935 10.9908006726 -0.0007215279 8.4525493120 10.3127288101 10.2184473558 10.2207934207 9.5991916863 12.3079022871 -0.2497000 -0.2497000 -0.2565700 0.1982800 0.3952900 0.3952900 0.3840300 -0.4473900 0.3521800 0.3710100 -0.0205490 -0.0205490 0.6157100 0.6157100 0.6053900 -0.4390800 -0.0026322 0.0024969 0.0024969 0.2321000 2.5102000 1.5274000 0.4225100 0.0356650 -0.2497000 -0.2497000 -0.2497000 0.2454400 0.0000000 0.0000000 -0.1963700 -0.1963700 -0.1963700 -0.2293200 -0.2565700 0.3098200 0.4005400 0.7851500 -0.9875200 -0.4473900 -0.4473900 0.3710100 -0.0205490 -0.0277830 -0.4554400 -0.4554400 -0.4261500 -0.4261500 -0.0026322 -0.0026322 0.0024969 -0.3912200 -0.3912200 0.2321000 3.2997000 -0.4272400 -0.0018014 0.0356650 -0.447 -0.447 0.371 0.371 0.000 0.000 0.605 -0.455 -0.426 0.000 0.000 0.000 0.000 -0.925 -0.925 0.232 0.232 -0.250 -0.250 3.657 3.657 0.000 0.000 0.245 0.245 0.000 0.000 -0.196 -0.196 -0.229 -0.229 0.331 0.331 0.785 0.785 -0.940 -0.558 0.240 0.240 0.000 -0.447 -0.447 0.371 0.371 0.000 0.000 0.605 -0.455 -0.426 0.000 0.000 0.000 0.000 -0.925 -0.925 0.232 0.232 -0.250 -0.250 3.657 3.657 0.000 0.000 0.245 0.245 0.000 0.000 -0.196 -0.196 -0.229 -0.229 0.331 0.331 0.785 0.785 -0.940 -0.558 0.240 0.240 0.000 6.1989518 4.8572595 3.5842410 14.8306601 9.3862190 5.8819215 7.2707420 0.9992785 10.8009872 8.0599749 5.3030610 3.3212066 9.4244947 10.6162870 12.3385721 9.7699428 11.4216064 10.1234002 9.3710554 7.2472060 5.5538673 12.3902538 -1.0005772 5.9650639 7.8541472 8.4931341 9.455633 11.556024 12.863368 9.693637 7.806634 10.285259 7.174205 3.584241 12.034250 12.898825 9.504098 13.132020 6.838483 12.376761 3.247214 8.156626 1.806654 14.607707 3.643140 11.439629 10.391596 10.300203 10.239474 7.251944 12.607418 8.565333 8.565333 8.711806 10.487119 1.806654 1.584241 9.159150 9.697983 11.752496 13.090962 10.445328 9.114323 9.372144 12.171550 12.612378 7.499124 10.273657 10.502608 7.369966 11.3217703 10.9465505 NA 8.9964582 11.9556550 10.7740659 9.3915963 9.5090539 9.2765662 14.8306601 9.3335521 8.2135981 10.1071497 9.2566668 8.6268125 10.7027499 10.8046197 9.0099467 13.6972780 9.1324211 10.1175710 9.7143829 9.9505635 7.8603657 5.7407468 11.5408595 10.9729762 10.7212324 9.7092243 9.8993909 8.6276149 9.9985742 11.5478600 9.6901499 12.1916210 NA 9.1717062 8.4566596 10.1381905 7.9447226 13.0844193 8.1566257 4.6431347 8.1388303 8.2424529 9.8986357 9.6945071 8.0077074 8.0026845 9.5040978 3.0867498 NA 7.5729260 2.1692195 9.6953771 5.1285615 11.1915717 9.6001209 10.0579471 9.7356807 0.5842891 10.6849037 13.7235262 9.3301958 10.9908007 10.0973110 9.5615213 9.1989511 5.1891050 10.0340778 10.4320399 -1.0005772 5.1285615 12.6924391 9.0354524 10.0195643 7.4951339 6.3480075 12.7633210 10.2256910 11.3894478 11.1897209 10.2207934 11.8775214 10.2887215 7.6539149 10.4556333 11.4916328 9.5991917 1.3212354 0.5842891 8.1314444 4.9992785 13.7867733 10.0299460 8.6485352 NA 8.6050917 10.2736570 10.8650121 7.5767073 8.0946758 12.0113796 4.2846844 8.2304999 TCGA-DC-6158 70 1 334 216 rectum stage i t2 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 102.35.0 NA NA 4 1 2 5 1 1 2 2 1 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2838102 11.5877638 11.7507685 8.0967083 8.8705229 9.9854617 4.3201236 NA 11.3124205 0.4456208 8.8775026 10.5624339 9.8705229 9.7085502 10.1174926 11.5467570 0.0557590 0.0000000 -0.3685500 0.0265880 0.7523300 0.8060700 0.8277500 0.0333420 0.0389870 3.3787000 -0.2550900 -0.2550900 0.5335400 0.5335400 0.9451700 -0.0863160 -0.0022822 -0.3395700 -0.3395700 0.0736220 1.2874000 1.2509000 1.3071000 -0.0547750 0.0592980 0.0592980 0.0557590 0.0358800 -0.3647000 -0.0078800 -0.3594800 -0.3594800 -0.3594800 -0.3685500 -0.3685500 0.0265880 0.0265880 0.4499000 -0.8053800 0.0194370 0.0333420 -0.3567500 -0.2550900 -0.2535200 -0.3543600 -0.3543600 -0.0863160 -0.0863160 -0.0022822 -0.0022822 -0.3486400 -0.7732400 -0.7732400 -0.3630000 -0.3676500 -0.6322000 -0.3566400 -0.0791390 0.000 0.000 0.000 -0.357 -0.255 -0.255 0.963 -0.354 0.000 0.000 0.000 -0.340 -0.340 -0.773 -0.773 0.000 0.000 0.000 0.000 0.920 1.287 -0.621 -0.357 0.000 0.000 0.000 0.000 -0.359 -0.359 0.321 -0.047 0.000 0.000 0.450 0.450 -0.053 0.752 -0.350 -0.350 0.000 0.000 0.000 0.000 -0.357 -0.255 -0.255 0.963 -0.354 0.000 0.000 0.000 -0.340 -0.340 -0.773 -0.773 0.000 0.000 0.000 0.000 0.920 1.287 -0.621 -0.357 0.000 0.000 0.000 0.000 -0.359 -0.359 0.321 -0.047 0.000 0.000 0.450 0.450 -0.053 0.752 -0.350 -0.350 0.000 8.229200 5.718674 3.253006 14.455660 9.604687 3.320124 6.995120 NA 10.571070 10.110400 7.060366 4.642055 8.735675 11.005671 12.229064 9.995121 11.090414 9.933497 9.958726 8.788472 6.511746 12.474484 3.814889 3.561131 7.178107 8.136818 10.328809 11.371953 11.999766 9.799539 8.479080 10.394997 6.518906 5.504550 11.333893 13.004396 10.268493 12.914875 6.687243 11.750768 7.581793 10.173577 1.668028 14.258736 4.218246 12.617667 10.714394 10.450345 9.985462 9.767585 13.005990 8.326260 8.318075 11.179802 11.664422 3.615581 1.668028 10.208869 9.988044 11.792355 12.302082 10.861750 7.950807 9.316021 12.309198 13.219689 6.687243 10.788102 11.053912 8.005352 11.4698730 11.1263093 1.4456737 9.2838102 11.5787989 11.5877638 9.4854896 9.0603666 9.0381138 14.4556597 7.5224725 8.4418947 9.8032088 9.1927307 9.2658356 10.6547039 10.6768779 9.3681817 14.2930404 9.3911005 9.6072086 9.3005251 9.1356547 8.8351087 7.3364280 11.3298273 10.9324917 10.1104003 10.3338926 9.8642122 7.4747045 9.1553149 11.3285545 10.0034395 11.8127147 NA 9.3575480 8.8606944 10.0002455 8.5732211 12.8571677 10.1735772 7.1180825 8.5559223 10.6134930 9.3201259 10.2556927 8.4133635 6.9639815 9.9508067 0.8606848 NA 8.2094222 0.4456208 9.3057091 6.0104419 10.5282494 9.3979127 10.1216138 9.7532370 -0.1392358 10.6931887 13.0711373 10.0511362 11.3124205 10.8379741 10.0368675 9.0104414 4.1826208 10.2215413 10.1719884 -1.1392358 7.5260305 12.6066836 9.2248289 10.6744754 7.7217814 6.6088876 12.9087553 10.6756772 10.3160215 10.6072085 9.7085502 11.4689490 9.5852080 9.1145417 10.8962357 10.7668332 10.1174926 NA NA 8.1821262 4.6155811 13.6593179 10.3920757 9.4596773 -0.1392358 9.1872360 10.7881018 1.8606848 7.8747146 8.4936894 12.2443985 5.2530135 8.4827459 TCGA-DC-6160 68 0 NA 914 rectum stage i t2 n0 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 102.35.0 NA NA 1 2 2 5 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3775891 11.1329418 11.9773252 8.0378462 9.7429485 10.9418426 0.0749164 0.0749164 10.9487786 1.6599246 8.5033102 10.4996412 10.5012148 9.9235729 9.8439614 8.3946222 0.01014600 0.01014600 0.00027728 0.01307400 -0.01601700 -0.01601700 -0.01601700 -0.02164700 0.34453000 -0.58161000 0.00083195 0.00083195 0.27244000 0.27244000 0.25810000 0.01279500 0.00277450 0.01409800 0.01409800 -0.02192100 0.51839000 0.53239000 2.04320000 -0.11848000 -0.57224000 -0.55836000 -0.55327000 -0.00705760 0.01134900 0.02721600 -0.55647000 -0.52328000 -0.54450000 0.00027728 0.00027728 0.01307400 0.00819590 0.00000000 -0.01601700 -0.02164700 -0.57209000 -0.57885000 0.00083195 0.00083195 0.00360760 0.00360760 0.01279500 0.01279500 0.00277450 0.00277450 -0.58471000 -0.56585000 -0.56585000 -0.02192100 -0.57388000 0.09202500 -0.58637000 -0.11848000 0.000 0.000 0.374 -0.182 0.000 0.000 0.277 0.000 0.000 0.000 0.000 -0.585 0.000 -0.566 -0.566 0.000 0.000 -0.544 0.000 1.218 1.218 0.000 -0.586 0.000 0.000 0.000 0.000 -0.556 -0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 -0.118 0.000 0.000 0.374 -0.182 0.000 0.000 0.277 0.000 0.000 0.000 0.000 -0.585 0.000 -0.566 -0.566 0.000 0.000 -0.544 0.000 1.218 1.218 0.000 -0.586 0.000 0.000 0.000 0.000 -0.556 -0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 -0.118 6.6141091 4.4672664 2.2448871 15.5136759 9.0507980 6.4058665 9.3923627 2.2448871 9.9997626 8.5985119 6.5827442 4.3228800 8.6785765 11.1203684 11.8032957 10.3013622 10.7671296 10.1423843 8.5158193 0.6599246 2.7753877 10.3568801 3.3228800 8.0522300 7.5906499 7.2892692 9.8806939 10.7539902 11.0331402 9.9491630 9.3216907 11.1896684 8.1703472 5.5178930 12.6541481 13.5770359 9.8943308 13.6714892 7.6485970 11.9773252 4.3228800 7.8331735 2.5343854 14.5450369 6.7115747 11.3790161 10.2641568 10.7061271 10.9418426 7.0693037 12.5651742 9.0987043 8.8709898 12.1524334 11.1828210 0.6599246 NA 9.7934828 10.3724396 12.4778289 13.2231088 11.2019771 8.7491424 10.0742454 12.2329285 13.9158263 6.8096601 10.5106203 11.6478871 7.2548595 11.7992507 10.8365012 0.0749164 9.3775891 11.3082701 11.1329418 9.7142907 9.5486559 9.1056171 15.5136759 8.8315065 7.9453145 9.7640744 8.9282596 9.7224085 10.6970019 11.1981015 10.3884850 14.0099309 7.9422289 9.6304978 10.1729821 9.9773252 8.5627900 8.5486559 11.6958571 11.7954081 11.2610643 10.1637382 10.0356760 7.9472863 8.9514669 10.9153346 10.8947299 12.2680488 NA 9.1703470 8.9530009 10.1028560 9.2106594 12.9844681 7.8331735 5.5668030 7.3695712 7.2093764 9.9149412 10.3724396 10.8538485 9.3889668 9.1544349 3.2448718 NA 7.6102254 -0.9249466 10.0042084 4.6295373 11.4117355 8.6896598 10.2813540 9.8505604 NA 10.6725371 13.6403497 8.4564928 10.9487786 10.4559522 9.5374524 8.5985119 1.6599246 11.3464131 10.2072184 NA 8.7977575 12.5660515 10.7165503 10.6864360 8.0174643 6.8758501 12.2053597 10.4198007 10.7367281 10.0327776 9.9235729 12.2125816 9.8847182 8.0320523 10.7844647 11.7964765 9.8439614 2.0749506 0.0749164 8.3728751 2.9818344 14.0110818 9.6362380 9.8028705 2.6599017 8.9440965 10.5106203 NA 9.1356459 8.2016544 12.7838184 3.1624195 7.4280972 TCGA-DC-6681 70 0 NA 394 rectum stage iva t3 n2a m1a 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 7 white not hispanic or latino 139.38.0 NA NA 1 2 1 2 1 2 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.007665 10.617337 12.449858 7.734910 9.202415 10.141334 2.757621 -1.412347 10.904835 4.653794 8.485550 10.549878 10.043032 9.779042 10.704374 12.081685 0.02637300 0.02637300 -0.01670400 -0.03531200 0.00124810 0.00124810 0.00124810 -0.00733390 -0.03159100 -0.01876500 0.00013863 0.00027728 0.08233200 0.08233200 0.08233200 0.00194180 -0.02780800 0.00208050 0.00208050 0.00458000 0.52965000 0.52965000 0.52965000 -0.00373950 -0.56157000 0.02637300 0.02637300 -0.01931400 0.14424000 0.14424000 -0.00332430 -0.00332430 0.00235810 -0.01670400 -0.01670400 -0.03531200 -0.03830600 0.03214000 0.00124810 -0.00733390 -0.00124730 -0.03367700 0.00013863 0.00027728 0.00000000 0.00000000 0.01056400 0.01056400 -0.02835500 -0.02863800 0.00208050 -0.52890000 -0.52890000 0.00458000 0.52965000 -0.02876500 -0.01272500 -0.00373950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.000 0.000 0.530 0.530 0.000 0.000 0.000 0.000 0.144 0.144 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.000 0.000 0.530 0.530 0.000 0.000 0.000 0.000 0.144 0.144 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.1575612 4.9627433 4.7374542 14.1082609 9.0745400 6.0955004 9.7131184 5.7576287 10.2980808 8.4046886 6.3558884 2.9096387 9.3542337 10.5426282 13.5385797 9.2680645 11.3534053 10.1205478 8.7144094 8.9692478 5.6211288 10.4010853 0.1726155 4.3425903 7.8684756 5.7873776 10.011871 10.457684 11.609899 9.335898 7.576390 10.211586 7.107342 4.891487 11.685737 13.201264 10.211129 12.996632 6.802024 12.449858 4.696228 10.305381 2.395063 14.280211 6.172668 12.119086 10.340922 10.090039 10.141334 7.886913 13.124316 8.898318 8.899453 10.792887 11.111757 2.757621 5.576389 9.733000 10.195497 11.660005 12.977538 11.102665 7.977874 8.554931 11.813214 13.147799 6.690992 9.706646 10.329172 8.049184 11.7954819 11.1134703 2.5877010 8.0076648 11.2772661 10.6173372 9.0108207 8.9778738 8.9583923 14.1082609 8.1053743 7.9518395 9.8427334 8.2024148 9.2161505 10.7463145 11.2161504 9.1648599 14.0543231 8.4300552 9.3723397 10.7147319 9.8863403 7.2565899 6.4580703 11.6738411 10.9570295 10.0347881 10.6138824 9.8141171 7.9203683 9.5891131 11.2367364 10.1038974 12.8376486 NA 9.0378851 9.2396534 10.4182201 9.7323632 13.7264966 10.3053813 9.4292693 9.0905367 9.5770995 10.4398442 10.0700086 10.5777308 7.3937388 8.7195620 -1.4123470 NA 7.3019507 NA 9.5206578 5.4331965 11.6204394 9.1820295 10.0144938 10.2654245 -0.4123470 10.8506806 13.9085054 10.2667451 10.9048348 10.5678445 10.0347881 8.9028544 6.2530400 11.0212903 10.5523887 3.3425974 5.9627433 12.7370551 9.9325555 10.5199197 7.7850202 5.6537938 12.3533018 10.2229696 11.0207687 11.0496958 9.7790417 12.0820605 10.3463445 8.5721234 10.9242114 11.2913922 10.7043738 -0.4123470 0.9096579 7.5009534 6.0955004 13.5625675 9.6031200 9.2270455 0.1726155 8.9623966 9.7066459 4.1422909 8.4487920 7.0512296 11.4536314 4.6751667 7.5989324 TCGA-DC-6682 57 0 NA 397 rectum stage iia t3 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 139.38.0 NA NA 4 2 2 5 3 1 2 2 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.772913 11.564145 12.501892 9.030809 10.023220 11.146752 2.304394 1.134484 11.382998 2.304394 8.970527 10.690025 10.709544 10.731799 9.189760 11.706704 -0.070075 -0.042924 -0.155030 0.785430 2.189900 0.432100 0.436990 -0.147720 0.066658 0.066658 0.149050 0.149050 0.151690 0.151690 0.549300 -0.130830 -0.371210 0.765230 0.826080 0.118730 0.318670 0.318670 0.318670 -0.046638 0.000000 0.000000 -0.070075 0.145020 -0.847870 -1.055100 0.146670 -0.597210 0.124760 -0.463340 -0.155030 -0.489840 -0.148110 -0.425060 -0.860970 -0.597310 -0.126650 0.031436 0.149050 0.149050 -0.153620 -0.153620 -0.130830 -0.130830 -0.371210 -0.433220 -0.480920 -0.268530 -0.268530 0.118730 -0.092478 -0.149010 -0.387980 -0.046638 -0.148 -0.148 0.000 0.000 0.149 0.149 0.116 -0.154 -0.131 -0.372 -0.372 0.284 0.765 -0.269 -0.269 0.119 0.119 0.000 0.000 0.000 0.319 -0.149 -0.388 0.124 0.124 -0.503 0.161 0.121 0.121 0.000 -0.132 -0.148 -0.148 -0.209 -0.405 0.251 0.422 0.000 0.000 0.000 -0.148 -0.148 0.000 0.000 0.149 0.149 0.116 -0.154 -0.131 -0.372 -0.372 0.284 0.765 -0.269 -0.269 0.119 0.119 0.000 0.000 0.000 0.319 -0.149 -0.388 0.124 0.124 -0.503 0.161 0.121 0.121 0.000 -0.132 -0.148 -0.148 -0.209 -0.405 0.251 0.422 0.000 0.000 0.000 6.3243012 2.9418387 2.8349134 14.6526682 8.9174753 4.8349185 9.6804068 0.7194025 9.9426368 10.4331125 5.0413657 3.4563988 9.2842242 11.4490603 12.1878939 9.8657960 11.9098816 10.7245962 9.6010634 4.3439336 2.3043942 10.5581183 1.1344838 4.3044015 8.2943483 7.0171202 10.2025835 10.4843112 11.0689051 9.5659747 8.6658585 11.7760772 8.3656982 4.1344756 12.6018279 14.4183612 9.4462254 13.7246547 7.3243012 12.5018918 4.1344756 8.6716953 6.8209780 14.4047724 5.5774198 10.1610005 9.4798823 10.7944730 11.1467524 6.6020827 12.1112202 9.2072796 8.8640979 8.8993488 11.5475760 0.7194025 0.1344838 9.8927002 10.4513243 12.6787171 12.6083096 11.2321800 8.6000433 8.5877475 12.1756228 13.1574516 8.6041188 11.9526598 9.6678068 8.4244960 11.0477405 10.9478575 2.7194463 8.7729130 11.9170658 11.5641453 9.5887763 9.9618198 9.7241282 14.6526682 8.9721050 8.4129263 9.4071069 9.3168714 9.2443077 11.2146283 11.4033114 10.0994748 14.6176000 9.5406820 9.8927002 8.8192256 10.6218146 8.1706507 5.7043325 12.2082839 11.2159605 10.1045829 9.4597824 10.0071519 8.8915504 10.3218291 11.4569686 10.4720989 11.8820512 NA 8.4244960 8.1259987 10.2956089 7.6775089 12.8209776 8.6716953 8.3143861 6.5181810 7.3536453 8.8452834 9.9150168 9.9092641 9.9994369 9.4024342 3.9418294 1.1344838 6.9353772 0.7194025 9.6658585 4.6890643 11.5903179 9.0443701 10.2285548 10.6243250 1.4563856 10.9606283 14.8064603 8.9955639 11.3829976 10.6799242 10.0102264 9.2430016 3.3824044 9.9174753 8.8552684 0.1344838 5.2430026 12.5321517 9.1900034 10.7043327 8.2272342 5.1344756 14.3698556 11.0923046 11.9728931 10.5358899 10.7317987 12.0689051 10.1850060 8.6122353 10.9990501 11.2650476 9.1897596 2.1344838 NA 7.5937033 4.4920262 13.2238448 10.6233214 9.4473600 1.1344838 8.6788040 11.9526598 5.9924580 8.6832989 7.0171202 12.6770253 6.1897593 3.9924603 TCGA-DC-6683 43 0 NA 306 rectum stage iiib t3 n1b m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 139.38.0 NA NA 3 3 1 2 3 1 2 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.617236 10.801282 12.460890 8.604885 9.350982 10.884993 3.434962 1.042644 11.527465 1.849999 8.506167 10.452564 10.307085 10.268453 10.589055 11.650433 0.0000000 -0.0083852 0.1114600 -0.0923420 -0.0400200 0.6971600 0.6971600 -0.4011200 -0.0649930 -0.0649930 0.2218100 0.2218100 1.2712000 1.9659000 0.4316600 0.0430700 0.4406000 0.4311500 0.4180200 -0.0075985 2.3794000 2.3794000 2.4972000 -0.0124050 -0.4190000 0.0326170 0.0000000 0.0185770 0.0289570 0.0289570 -0.0892410 -0.0844770 -0.0871300 0.1010000 0.1114600 -0.0875280 -0.0923420 0.4547800 -0.9295000 -0.4011200 -0.4011200 -0.0649930 0.2218100 0.2218100 -0.3937000 -0.3937000 -0.3843200 -0.3843200 0.4406000 0.4408500 -0.4313300 -0.4240300 -0.4240300 -0.0075985 -0.4615900 -0.2263300 -0.4117500 -0.0124050 -0.401 -0.401 0.000 0.000 0.222 0.222 1.217 -0.394 0.000 0.441 0.441 -0.013 0.418 -0.424 -0.424 0.000 0.000 0.000 0.000 -0.462 1.108 -0.226 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.455 0.455 -0.863 0.697 0.000 0.000 0.000 -0.401 -0.401 0.000 0.000 0.222 0.222 1.217 -0.394 0.000 0.441 0.441 -0.013 0.418 -0.424 -0.424 0.000 0.000 0.000 0.000 -0.462 1.108 -0.226 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.455 0.455 -0.863 0.697 0.000 0.000 0.000 7.3094291 6.3187669 3.1301072 15.1216474 8.7256372 4.0426443 7.7326403 -0.9573557 10.5568634 8.4306600 5.4176804 3.0426443 9.6369671 10.7941866 13.3197119 9.9283389 12.1006343 10.6005849 8.9659701 8.4067773 4.1719274 13.1837119 -0.9573557 1.0426443 5.9615053 6.9252850 9.63603365 11.32080156 12.75204950 9.34185058 8.04545771 10.99210455 7.49385385 4.82400405 12.52191755 13.58543259 10.02492314 13.48681626 7.10333817 12.46089048 6.07606520 8.84515882 0.04264434 13.88405946 5.01992426 11.97891241 11.06985741 10.75295819 10.88499285 8.48351189 13.27258789 9.14593036 9.21631978 5.32804296 10.58228606 1.62760684 2.04264434 9.53949637 9.94953318 12.31949392 13.53949631 10.82195148 9.16417609 9.72300198 13.03345561 12.86889307 6.96745454 9.81495715 11.78642508 8.48765758 11.09453121 10.63743364 -0.95735566 9.61723603 11.91781593 10.80128220 9.55637021 9.59338926 9.25938831 15.12164744 8.45838447 8.61439514 9.95702773 8.16676364 8.76886084 10.88223999 11.88361711 8.51037017 13.99870100 8.73612960 9.57402391 9.32804476 9.90372944 7.53048281 5.92528501 11.60679202 10.84273352 10.84313803 9.43924725 9.69548757 9.61221333 9.88263357 11.49411125 9.52242284 12.01389329 NA 9.05247105 7.96739574 10.59483132 7.99974469 13.75790746 8.84515882 7.87236523 7.69369394 8.61439514 9.63416487 9.96671265 8.55538288 8.68649878 10.07606560 -0.95735566 NA 8.23246698 NA 9.34528149 4.25209770 11.19334184 9.00842694 9.55340678 10.35948976 2.04264434 10.51533340 14.16073194 9.21006078 11.52746542 10.55291218 9.66835141 8.93594410 5.81082609 9.61534272 9.35409574 2.04264434 5.61249700 12.62337218 9.19238973 10.05107119 7.67592811 6.30942906 12.75258792 10.73176696 11.10772200 10.86202335 10.26845252 11.76779572 9.93973170 7.99100987 10.74091314 10.51736251 10.58905475 2.84999926 NA 8.05627246 4.32804656 13.56098834 10.43549661 8.91454778 0.04264434 8.54013501 9.81495715 9.37914916 7.30473736 7.73264027 11.92299133 4.32804656 6.71506831 TCGA-DT-5265 51 0 NA 161 rectum stage ii t3 n0 m0 25-9-2014 male 2010 NA NA rectal mucinous adenocarcinoma yes rx NA asian not hispanic or latino 139.38.0 NA NA 1 3 1 2 1 1 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.010178 10.784315 12.973490 8.249993 9.138293 9.801122 5.831766 NA 10.047762 1.596554 7.412467 11.289166 10.036035 8.556939 10.855901 8.617067 -0.039028 0.000000 -0.018078 -0.601430 0.035242 0.035242 0.035242 0.031492 0.081899 3.656900 0.152630 0.152630 -0.558270 -0.558270 0.630780 0.087100 -0.031713 0.261840 -1.292900 0.035524 0.026233 0.026233 0.026233 1.036900 -0.039028 -0.039028 -0.039028 0.032362 -0.347670 -0.347670 -0.014811 -0.014811 -0.020275 -0.018078 -0.018078 -0.601430 -0.594870 0.617090 -0.622650 0.031492 0.031492 -0.557070 0.152630 0.032986 -0.019040 -0.019040 0.087100 0.087100 -0.031713 -0.029857 -0.618150 -1.291900 0.052810 -0.556870 0.026233 -0.056712 0.021884 0.968430 0.000 0.000 -0.523 -0.523 0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 0.117 0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 -0.601 -0.601 0.617 0.617 -0.623 0.000 0.000 0.000 -0.194 0.000 0.000 -0.523 -0.523 0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 0.117 0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 -0.601 -0.601 0.617 0.617 -0.623 0.000 0.000 0.000 -0.194 8.45453167 8.00876755 4.81894257 14.91403328 9.57954411 6.42097918 8.19398212 NA 9.70158596 10.00876741 5.51938150 2.33350961 9.77064391 10.89346665 12.29032781 8.89728430 10.39042468 9.76480476 8.39096641 12.15704254 5.22104184 12.65780915 0.01163876 6.09905109 6.39529249 7.44204029 9.5361297 10.1279319 12.3059215 9.3016069 7.4669150 9.4039055 3.7664786 3.7120234 9.2607015 12.0942360 10.0024010 12.3209222 6.3244704 12.9734898 7.7929477 10.2075753 -0.9885044 14.3051674 6.6189184 11.7420581 10.6504764 9.8084388 9.8011216 9.4283855 12.4065865 9.0200165 7.7797725 11.7637595 10.8436868 1.5965536 1.5965536 10.1089618 10.3368935 11.5243284 10.2038808 10.2660261 9.0129963 8.3558840 10.7331144 12.8889680 6.0115873 9.5361297 10.0743087 9.7822519 12.22302004 11.14921960 3.09904267 9.01017840 10.99422507 10.78431495 9.05871181 8.76313201 8.86333700 14.91403328 8.00876755 8.11749662 10.33126015 7.28771238 8.92298007 10.54929172 11.62744748 8.60137005 13.98998562 9.56137273 8.84131085 10.22347625 9.50943972 8.02560857 4.43785359 11.74290702 10.75221203 9.39313086 10.54977687 10.23196634 9.62719916 8.66801272 11.86021090 9.71808399 12.40543021 NA 9.12011240 8.47715435 11.07801361 7.62629749 12.19754741 10.20757530 10.18339024 10.57096511 8.50943972 7.70855559 9.87189908 8.42309910 7.69106789 9.65273654 -0.98850436 1.33353823 7.71549188 6.73268708 8.21615896 6.42944022 11.08806956 8.65363976 10.69633660 10.28246726 1.81893234 10.89193677 14.03148271 10.40605063 10.04776153 11.09373703 10.36913993 7.33351587 4.14086862 10.03811143 10.54977206 3.25951354 3.25951354 12.97628982 9.05324713 10.84724366 7.26032211 3.71202343 13.04139281 10.67024577 10.17712312 10.62307389 8.55693861 11.57573749 9.36031621 8.64821268 11.04535512 10.81167894 10.85590143 0.01163876 1.33353823 8.02491082 5.14087271 14.06462292 10.07228390 8.54880650 NA 8.30804546 9.53612966 6.38662818 6.83813618 7.89117126 11.48453261 5.20141430 8.13570929 TCGA-DY-A0XA 57 0 NA 3846 rectum stage iia t3 n0 m0 25-9-2014 female 2001 3635 NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 133.39.0 NA NA 3 1 3 6 3 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9288414 10.5743728 11.9016485 8.4146958 9.3491074 10.2435681 4.1034137 NA 10.7233113 -0.9839316 8.1555034 10.8634010 9.6571006 9.9116107 9.8809120 8.3800865 0.03155100 0.03155100 -0.33181000 0.02705000 -0.74987000 0.94462000 0.98573000 -0.04877300 0.33364000 -0.36546000 2.55350000 -0.02482300 1.53590000 3.00750000 1.59700000 0.03888700 0.07079100 0.02480300 0.02410200 -0.00680640 1.39120000 1.39120000 1.43780000 -0.03914600 -1.29290000 -0.31555000 -0.31555000 0.01791200 0.03225600 0.05491900 -0.19465000 -0.19465000 -0.19465000 -0.33181000 -0.33181000 0.01915700 0.00000000 -0.03302100 -0.77304000 -0.04877300 -0.04877300 0.34808000 -0.01494100 -0.06247100 -0.00334940 -0.00334940 0.04518400 0.04313100 0.07079100 0.07079100 -0.72147000 -0.72316000 -0.72316000 -0.00680640 0.20180000 -0.33528000 0.00066811 -0.03914600 0.000 0.000 0.334 0.334 3.657 3.657 -0.700 0.000 0.000 0.000 0.000 -0.721 0.000 -0.723 -0.723 0.000 0.000 -0.316 0.000 1.391 1.391 -0.335 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 -0.332 -0.332 0.000 0.000 1.201 0.000 -0.749 0.236 0.000 0.000 0.000 0.000 0.000 0.334 0.334 3.657 3.657 -0.700 0.000 0.000 0.000 0.000 -0.721 0.000 -0.723 -0.723 0.000 0.000 -0.316 0.000 1.391 1.391 -0.335 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 -0.332 -0.332 0.000 0.000 1.201 0.000 -0.749 0.236 0.000 0.000 0.000 5.8863160 4.8739313 2.6009120 14.8554994 8.8598733 3.7708396 8.6741637 2.1858665 10.0500633 10.3519007 5.1244770 3.3378823 9.4274631 10.9088744 12.5135545 8.7301977 11.5304196 10.5346053 8.8520026 7.8038547 3.5395187 11.5020329 -0.9839316 5.8361312 7.0215763 8.6652083 9.96139601 11.56091653 12.26432445 9.86222603 7.96139586 10.78248097 7.82008321 4.18587447 12.93201816 12.87286390 9.76833272 12.90982241 7.33788054 11.90164846 6.06034575 8.18337039 0.01592569 14.53555764 4.89859534 12.03432616 10.90697633 12.82750241 10.24356805 6.75066144 12.23995379 9.68128797 8.32201375 9.39533041 10.33392995 -0.98393163 NA 9.63891896 10.15486379 11.61097641 13.60062106 10.64074753 8.30135443 9.92659488 11.79690188 12.55535328 7.34686916 9.34798869 11.45422417 8.66520834 11.24867281 10.94150654 0.01592569 8.92884137 11.96577880 10.57437280 9.46716330 9.30597098 9.97595398 14.85549940 9.05897935 8.27804703 9.76749623 8.65980828 9.42321993 10.73662390 10.74854350 9.58947625 13.59638734 8.28974780 9.91379762 10.03136721 10.34406595 6.49168477 6.19586135 11.80365065 11.64894730 10.42481252 10.00037063 10.18148723 9.21974064 10.02717935 11.64985550 9.78826661 12.27949419 NA 9.09410303 8.82812950 10.22235599 7.48762703 13.23867155 8.18337039 7.88631663 7.97595398 6.29207679 8.96869329 10.18775439 9.58295749 6.89246874 9.07799812 -0.98393163 NA 6.73705125 NA 9.04109154 3.77083962 11.07934717 8.38881722 10.37515263 9.39207760 2.01596136 10.68173211 14.35273758 9.67237690 10.72331128 10.59903487 9.97305414 8.54147302 3.10341371 10.28916496 10.81322052 NA 6.47538325 12.53509690 8.82008321 10.55559561 8.06580062 6.25435594 13.02979815 9.67951018 11.25256432 10.54489452 9.91161070 11.79854086 10.21623767 8.22784021 11.15933533 11.26358300 9.88091200 -0.98393163 0.01592569 7.88998027 6.96431892 12.75815626 9.78661596 9.31286821 1.82330100 8.78294482 9.34798869 8.23753934 10.49117888 6.48355784 12.07833560 5.87393375 8.34013273 TCGA-DY-A1DC 72 1 1258 1258 rectum stage iia t3 n0 m0 25-9-2014 female 2000 1258 NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 133.39.0 NA NA 4 2 2 5 3 1 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.957238 11.114011 12.090293 8.563123 9.090293 10.101389 0.985719 NA 9.944972 2.793043 8.338842 10.486039 9.854517 9.333316 10.241903 11.182297 0.0288810 -0.0184050 -0.7304800 0.0076169 0.6488800 0.6488800 1.2511000 0.0078952 0.0054680 0.0054680 0.0318820 -0.0043791 1.3120000 1.3120000 1.1962000 0.2725100 0.0624880 0.0697890 0.0532570 0.0746730 1.3926000 1.3926000 1.4261000 0.0992650 0.0478130 0.0478130 -0.6993900 0.0000000 0.0136100 1.1501000 -0.0233140 -0.0467400 -0.0702900 -0.0333460 -0.7304800 -0.0081845 -0.0418530 0.6564200 -0.7281000 -0.0093699 0.0187800 -0.0110820 0.0318820 -0.0043791 0.0529740 -0.7212100 -0.4254600 -0.4254600 0.0624880 0.0624880 -0.6791300 -0.7052400 -0.7052400 0.0746730 -0.6964200 -0.0244090 -0.4175200 0.0992650 0.000 0.000 0.000 0.000 0.000 0.000 1.281 0.000 -0.425 0.000 0.000 -0.679 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.696 1.393 0.000 -0.404 0.000 0.000 1.095 1.095 0.000 0.000 0.000 0.000 0.000 0.000 0.656 0.656 0.489 1.217 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.281 0.000 -0.425 0.000 0.000 -0.679 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.696 1.393 0.000 -0.404 0.000 0.000 1.095 1.095 0.000 0.000 0.000 0.000 0.000 0.000 0.656 0.656 0.489 1.217 0.000 0.000 0.000 6.699940 5.325545 1.570657 13.799225 9.070503 4.868336 9.810653 NA 10.482049 9.713615 5.114979 3.233627 9.934062 10.253067 12.834513 10.055816 12.285189 9.422406 8.587466 9.710209 4.378012 11.851428 1.985683 6.892585 6.352017 7.629551 9.30197625 10.64880803 12.21946414 9.33663398 8.12268566 9.86986524 6.08372609 5.05178536 12.66319414 12.85519215 9.22051207 13.29602346 6.34324613 12.09029344 4.98569624 9.01083438 0.98571900 13.97402435 5.49349043 12.14256782 10.84794462 9.74308473 10.10138863 7.30310764 13.56495171 8.60591467 8.37371215 10.50876655 9.51805058 -0.01435385 2.30763253 8.97295883 10.37693835 11.68591764 12.50741782 10.87367680 8.60591467 9.10203868 12.52920991 13.37007375 6.72040434 10.10852276 10.17613674 7.42032323 11.17829573 11.34681604 1.30760339 7.95723847 11.13130845 11.11401128 8.56877736 8.96297464 8.59856322 13.79922490 9.13417139 8.24543814 10.83000815 8.18045174 8.62593966 10.87519866 10.75800929 9.12952439 14.53878396 9.51317173 9.63764339 10.02940554 10.52145606 7.70679368 7.20486357 12.01549956 10.13734559 11.47679622 10.14304170 10.24190345 8.38373280 9.97437945 11.26123726 9.94786775 12.15385909 NA 9.36290532 9.04639065 10.33884155 8.20001384 12.02512786 9.01083438 7.27571388 8.78821098 8.63135315 9.20728184 10.11562165 9.07183103 7.66517458 9.65900385 NA NA 7.09421918 -0.01435385 8.88505174 4.71361334 11.55460084 8.48154961 10.23243532 10.10138863 -1.01420815 11.01808484 14.10965441 9.68613438 9.94497218 10.69822169 10.06784372 7.55934191 6.01911698 9.80347779 10.70892902 NA 6.51707566 12.99893012 9.39614600 10.06850906 7.48554034 4.37801214 13.23503041 11.16342564 11.29261083 11.41562443 9.33331616 11.99534841 10.74141685 8.38870660 9.52775926 11.69736169 10.24190345 NA NA 8.42111514 5.54028460 13.67711109 8.73891136 8.48154961 -1.01420815 8.86221177 10.10852276 4.84367739 6.65103016 7.85913904 11.70700756 4.15561972 7.70337137 TCGA-DY-A1DD 77 1 1741 1741 rectum stage iiib t3 n1 m0 25-9-2014 female 1999 1741 NA rectal adenocarcinoma yes NA 1 white not hispanic or latino 133.39.0 NA NA 4 1 3 6 3 1 1 1 4 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.073889839 10.609295387 12.292014251 8.738829636 8.351155680 9.095184691 5.172351496 0.002450499 10.343946400 2.587388996 6.956623580 10.826192854 9.574180242 9.409695355 10.269799468 11.020627762 0.0279800 0.0000000 -0.7762600 -0.0173910 1.3207000 1.3207000 1.4994000 -0.0058140 0.0259520 -0.0080107 1.4479000 0.0123760 1.5761000 1.5761000 1.5761000 -0.8131800 0.0430630 0.0472680 0.0472680 1.7022000 3.2806000 3.1834000 2.1465000 -0.3577200 0.0290440 0.0290440 0.0279800 -0.0210920 0.0028749 0.0081959 -0.0344950 -0.0452990 -0.0538660 -0.7762600 -0.7762600 -0.0173910 -0.0173910 1.4708000 -0.8858800 -0.0058140 -0.0058140 -0.0069195 0.0123760 0.0081959 0.0032652 0.0199230 -0.8131800 -0.8131800 0.0430630 0.0430630 -0.8283800 -0.8354800 -0.8451500 0.0216030 -0.2562400 -0.8352700 0.0563700 0.2720600 0.000 0.000 0.000 0.000 0.000 0.000 1.576 0.000 -0.813 0.000 0.000 -0.828 0.000 -0.835 -0.835 0.000 0.000 0.000 0.000 -0.256 3.657 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 -0.776 0.000 0.000 1.484 1.484 1.321 1.321 0.000 0.000 0.209 0.000 0.000 0.000 0.000 0.000 0.000 1.576 0.000 -0.813 0.000 0.000 -0.828 0.000 -0.835 -0.835 0.000 0.000 0.000 0.000 -0.256 3.657 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 -0.776 0.000 0.000 1.484 1.484 1.321 1.321 0.000 0.000 0.209 5.617137 6.068516 4.757317 14.496590 9.639958 5.688927 4.002423 NA 8.366562 7.757315 3.089888 2.324350 10.341721 10.294174 12.630873 9.936856 11.422124 9.361079 9.309628 7.688928 4.324357 10.824202 1.324350 6.089890 0.587365 6.933165 9.286673 11.959530 13.356470 9.460834 6.973972 9.600480 5.909317 3.646289 12.459808 12.426988 9.283198 12.744948 6.002428 12.292014 4.428692 9.380723 1.324350 14.995255 6.816209 11.184822 10.042717 9.623564 9.095185 6.342277 11.572520 9.692426 7.832150 5.411819 10.065148 2.587389 1.587413 8.855737 10.101118 10.907062 12.906309 10.113563 7.944942 10.295324 11.944942 12.413144 6.835318 10.258046 10.733322 8.292446 11.955168820 11.537216799 3.089887924 8.073889839 11.581507734 10.609295387 8.960980199 8.342277387 9.257456204 14.496590012 9.366562206 9.262170738 9.359979670 7.131710884 8.709786546 10.817010014 10.226429293 8.149403677 13.790636101 9.414997416 9.250355035 9.471051673 10.692862090 7.591142315 4.359977914 12.018539423 10.844777937 10.606053889 9.827386373 10.298770220 9.820306629 9.827386373 11.190088926 10.035850550 11.719114161 NA 9.093863047 8.986846067 10.210052009 6.269214594 13.068096144 9.380722523 6.950794990 9.698525664 7.449511028 8.557016368 10.351155680 8.949699211 7.449511028 11.101775399 5.557017900 1.809784846 7.478161274 4.211884402 8.057710194 5.461859205 11.643801998 8.259815279 10.452607789 9.865839498 0.002450499 10.927611095 14.006296805 10.040660691 10.343946400 10.715384368 10.072548534 6.541586080 6.411817713 9.919053547 9.311437722 4.002423494 3.587388996 12.973342316 9.473086536 9.918306917 7.591142315 4.211884402 13.529721297 10.548839725 10.433402772 11.657287317 9.409695355 11.729497115 9.994657785 7.841631646 9.301635656 11.494531117 10.269799468 -0.997693533 NA 8.987443947 8.252725977 13.348179309 9.748101923 8.308489208 0.002450499 8.714816987 10.258046335 6.885070358 9.164818955 7.806558644 11.937408397 5.172351496 7.609757917 TCGA-DY-A1DE 56 0 NA 3932 rectum stage iia t3 n0 m0 25-9-2014 female 2001 3667 NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 133.39.0 NA NA 2 1 3 6 1 1 1 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.16759502 10.54856436 11.51003913 7.92289238 9.53956364 10.16019654 0.97158954 -0.02841046 10.31645838 1.97158954 8.00227496 9.11243742 9.79736145 8.79018980 9.35206881 9.14528489 0.6992200 0.8937600 0.0000000 0.5195100 -1.1298000 0.8845400 0.0040840 -0.5009600 -0.0271490 0.4148700 -0.0792860 -0.0830670 1.5743000 0.4604900 0.4826900 -0.0215310 0.0685830 -0.0875220 0.4239500 -0.4886400 2.3603000 0.8402600 0.8898700 -0.2018100 -0.5859000 -0.5641100 -0.2444300 0.3243800 0.4303100 0.0457690 -0.5465900 -0.5043800 -0.5414200 -0.9886800 0.0000000 0.4877800 -0.0187060 -0.0193930 -1.1298000 -0.5009600 -0.5009600 0.4338300 -0.0792860 -0.4761300 -0.5460200 -1.0910000 0.0060297 -1.2929000 0.0685830 -0.1270100 -0.5858400 -1.2929000 -0.9898700 -0.4886400 1.5000000 -0.0178820 -0.5562300 -0.2018100 -0.424 -0.424 0.000 0.000 0.000 0.000 0.460 -0.542 0.000 0.000 -0.121 -0.572 0.000 -0.554 -0.554 3.168 3.657 -0.267 0.260 1.500 0.890 -0.536 0.000 0.324 0.324 0.393 0.000 -0.514 -0.514 0.000 0.000 0.481 0.000 0.523 0.000 -1.105 0.000 0.548 0.548 -0.262 -0.424 -0.424 0.000 0.000 0.000 0.000 0.460 -0.542 0.000 0.000 -0.121 -0.572 0.000 -0.554 -0.554 3.168 3.657 -0.267 0.260 1.500 0.890 -0.536 0.000 0.324 0.324 0.393 0.000 -0.514 -0.514 0.000 0.000 0.481 0.000 0.523 0.000 -1.105 0.000 0.548 0.548 -0.262 7.5752337 6.1907768 3.8295858 14.9306800 8.9228924 5.1213553 6.8844966 NA 11.1024999 8.8739826 5.3466485 3.7264934 10.0735833 10.8100238 12.4181741 9.4674627 11.8609215 9.3170130 8.0430699 8.0537565 3.8295858 12.0694752 2.9716079 5.4310379 0.9715895 7.5029893 9.57430647 11.21031093 12.75593577 10.02756795 8.44936576 10.79098848 7.20522730 4.72649339 12.84457106 13.19183481 9.81866493 13.28122612 6.85425129 11.51003913 5.41455164 8.34881799 -0.02841046 14.45834842 4.69952942 11.68413464 11.01052664 8.65284605 10.16019654 8.11626598 12.27110190 10.17005273 9.26852375 7.88748689 10.17923211 1.97158954 0.55660108 9.94243255 10.98946000 12.12547630 12.80439880 11.51391409 8.09314128 9.07095545 11.20462806 13.59360226 7.87247420 8.17127990 10.52427676 8.70970006 11.41117888 14.01885941 1.55655204 9.16759502 10.84735698 10.54856436 8.95602615 9.50591057 9.73482002 14.93068000 9.24073434 7.45542340 9.13651466 8.86945319 8.84351283 10.78498803 10.35800904 9.76618600 13.64242985 8.63338580 9.28675711 8.72482453 9.86945319 12.20222859 5.21953641 11.82140370 10.55516064 10.84158699 9.67551128 9.87096464 9.27111328 9.55750908 10.75542441 9.34664714 11.66662493 NA 8.47543351 7.89642020 10.36446169 8.15151689 11.97354358 8.34881799 5.94888814 9.05774376 7.66509426 8.84658890 9.76926925 9.54998041 7.72315169 8.72983076 4.29353234 -1.02826333 7.34664669 -0.02841046 8.98423216 5.90234617 10.79577084 8.56966007 10.10731700 9.28108409 -0.02841046 10.60959098 13.96211054 9.57986255 10.31645838 10.28619086 13.28094189 7.79497464 3.43103453 9.48730746 10.36685264 3.49517068 5.98283390 11.92834682 8.76114130 9.71223173 7.06963988 4.10089357 12.54371573 10.52331593 11.68219886 10.53861304 8.79018980 11.30112370 10.03432839 7.36821222 9.88748704 10.86263186 9.35206881 2.55657656 NA 7.44547594 6.01600149 13.35443429 9.48237176 8.58263240 -0.02841046 8.44620577 8.17127990 6.51850209 6.92580364 7.21001279 12.26249047 3.55656430 8.53385025 TCGA-DY-A1DF 73 1 734 734 rectum stage iiic t3 n2 m0 25-9-2014 female 2001 734 NA rectal adenocarcinoma yes NA 5 white not hispanic or latino 133.39.0 NA NA 2 3 3 4 1 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4425554 10.5910433 12.7265821 8.6246288 8.7741542 9.2791588 7.1142296 -0.6994662 10.4290872 1.3004752 7.2311857 11.6251915 10.0826276 9.8386373 9.8966382 10.7731392 0.558860 0.558860 -0.028855 0.625700 0.532600 0.532600 0.565610 -0.608540 -0.598470 -0.568130 -0.515170 -0.545470 3.434700 3.434700 3.214800 -0.578230 0.108480 -0.548540 -0.548540 0.722630 0.717540 0.717540 0.717540 0.048262 0.651670 0.651670 0.558860 0.043015 -0.088337 -0.089831 -0.060716 -0.060716 -0.598380 -0.046854 -0.059682 -0.515680 0.514510 1.437700 0.590270 0.038206 -0.608540 -0.606800 -0.515170 -0.545470 -0.602840 -0.042695 -0.578230 -0.578230 0.120640 0.083631 -0.548540 -0.616710 -0.616710 -0.482290 -0.608440 -0.034566 0.693160 0.048262 0.560 -0.015 -0.605 -0.605 -0.545 -0.545 0.995 0.000 -0.578 0.143 0.143 -0.549 -0.549 -0.589 -0.589 -0.467 -0.467 0.559 0.559 0.718 0.718 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.000 1.573 1.573 0.533 0.533 0.000 0.000 0.000 0.560 -0.015 -0.605 -0.605 -0.545 -0.545 0.995 0.000 -0.578 0.143 0.143 -0.549 -0.549 -0.589 -0.589 -0.467 -0.467 0.559 0.559 0.718 0.718 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.000 1.573 1.573 0.533 0.533 0.000 0.000 0.000 5.2777282 6.3665373 4.5483750 14.9742736 10.3872480 2.3004459 8.1952659 NA 9.9719894 10.0768815 3.3879139 1.8854182 10.3865846 10.4316622 12.8248677 10.8740956 11.0524108 9.0198373 9.4728758 8.9657843 4.7267114 9.5916190 -0.6994662 5.0008879 5.3004496 8.0146939 9.7066533 10.5238467 11.4268302 8.8891629 7.2777282 9.1285849 5.0008879 3.6223799 12.0567962 11.9277543 9.3074757 12.2157676 6.0553367 12.7265821 4.3448427 8.9497045 0.8854182 14.8694436 6.1459383 11.5480792 9.7108997 9.2820155 9.2791588 7.6402984 12.4862530 9.7943038 7.2252605 12.4019317 10.1269969 0.8854182 -0.6994662 9.9003612 10.2200566 11.0956763 11.4546336 11.0082389 4.2073385 8.7309008 11.0850832 13.1808928 6.6223769 9.8882259 10.9447553 9.2990388 12.1384704 10.9348057 0.3004166 8.4425554 11.2256319 10.5910433 8.7013280 8.3772639 8.5147673 14.9742736 9.7340338 9.4915076 9.5280643 7.1396526 8.5244500 10.6291233 11.3805997 8.6280233 13.3717431 9.8022855 8.9406933 9.7193551 10.0678053 7.1708134 3.3004459 10.2050830 9.7832563 8.4037364 9.9991530 10.1427987 8.0249623 8.3283545 11.1595949 9.8531174 12.9655400 NA 8.5220353 9.1982938 10.3932055 8.0948642 11.5442174 8.9497045 7.8396069 8.9974158 6.5292666 8.0351581 10.0292192 8.0385404 2.0250997 10.4514649 2.1077883 NA 6.8082435 NA 6.7267127 6.1078029 11.5596031 8.6402984 10.5328693 9.3311156 2.6223682 9.9702192 13.7566102 9.7923015 10.4290872 10.2962156 9.9604442 6.1952669 5.8703031 11.2531896 10.2662543 0.3004166 3.3004459 12.4678665 9.5893144 9.7340338 6.9298052 4.2546469 13.6561436 11.1384704 10.0189813 10.8966381 9.8386373 12.5975079 10.2604503 7.8082428 9.4297314 10.6959825 9.8966382 NA NA 8.5993587 5.7267141 13.1045794 9.9415970 8.4902729 0.3004166 7.5765728 9.8882259 0.3004166 7.4193897 7.4653550 11.9928459 4.8550379 4.9151576 TCGA-DY-A1DG 75 1 1566 1566 rectum stage iva t3 n1 m1 25-9-2014 male 2000 1566 NA rectal adenocarcinoma yes NA 2 white not hispanic or latino 133.39.0 NA NA 3 1 3 6 3 1 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.5571006 10.5064411 12.8331282 9.1395565 9.4858657 8.8301193 4.7534976 -1.0279691 11.2212517 0.9721044 7.9146530 11.0175566 10.4197381 9.1167965 10.0542873 11.4584705 0.01586600 -0.59448000 -0.60468000 0.58166000 3.65690000 -0.11339000 -0.11469000 0.01391100 -0.00968060 -0.00968060 -1.23680000 -1.21490000 0.69036000 0.69036000 1.36060000 0.03467700 0.60124000 0.59800000 0.59800000 -0.57704000 1.92280000 2.04800000 0.70214000 -0.06940700 0.02160300 0.02160300 0.01586600 -0.01752900 0.00083195 0.00541390 0.40339000 0.40339000 0.40339000 -0.58941000 -0.60468000 0.02188400 -0.01568300 -0.00097017 -0.09604400 0.01391100 0.01391100 -0.01876500 -1.18630000 0.02062300 -0.58579000 -0.58579000 -0.56236000 -0.56236000 0.02918400 0.60124000 -0.58382000 -1.20720000 -1.21920000 -0.57704000 0.07858200 -1.17790000 -0.60584000 -0.06940700 0.000 0.000 0.000 0.000 -1.186 -1.186 0.690 -0.586 0.000 0.000 0.572 -0.564 0.034 -1.191 -1.191 -0.577 0.000 0.000 0.000 0.000 0.593 -0.575 -0.584 0.550 0.000 0.000 0.000 0.403 0.403 0.000 -0.578 0.000 0.506 0.000 0.000 -0.113 -0.113 -0.546 0.000 0.000 0.000 0.000 0.000 0.000 -1.186 -1.186 0.690 -0.586 0.000 0.000 0.572 -0.564 0.034 -1.191 -1.191 -0.577 0.000 0.000 0.000 0.000 0.593 -0.575 -0.584 0.550 0.000 0.000 0.000 0.403 0.403 0.000 -0.578 0.000 0.506 0.000 0.000 -0.113 -0.113 -0.546 0.000 0.000 4.14206212 4.72702734 -1.02796912 14.61449966 9.53342610 3.83012346 7.76330135 -1.02796912 9.75595494 9.53819223 2.67258375 1.77951188 10.66780149 11.06489538 12.84288823 9.65337661 11.99554607 8.19613980 8.82700664 4.01653198 -0.02782203 11.48018054 1.77951188 1.97214120 5.80502928 5.74032316 9.875267 11.015166 12.389200 9.844043 8.316434 10.290116 6.601494 2.557091 13.689868 12.777378 9.461986 12.993378 6.805028 12.833128 3.672572 6.842502 1.294077 14.848247 5.495702 11.980392 10.020625 7.966492 8.830119 5.479932 12.065226 9.163198 7.623190 11.122520 9.699208 NA NA 9.614190 10.325836 11.495700 12.990512 10.682945 7.557101 8.241265 11.142376 13.041000 7.455954 12.340508 10.355843 8.132010 11.1782368 11.2943481 NA 6.5571006 11.4096302 10.5064411 8.9537055 9.0556176 9.2951929 14.6144997 9.2271668 8.6087627 9.9270615 7.1065650 8.8730051 10.2753482 10.8125228 9.1677074 14.5341421 9.8129161 9.3482636 10.3666009 10.6898147 8.0675355 3.5571037 11.8758318 9.1779315 11.7807003 10.2884197 10.4784458 9.7132765 9.8425029 11.0891319 9.6365855 11.9103009 NA 8.2224365 8.4960137 8.6743109 7.5190323 12.4306730 6.8425025 8.8547811 6.3899901 6.0165320 7.9777630 9.5813170 8.6918178 6.8608809 8.1937254 7.4917745 -1.0279691 7.1470634 -1.0279691 7.6267742 4.3644534 11.4814184 8.7681777 9.8895104 9.7843155 1.2940766 10.3307894 14.4960064 10.0609265 11.2212517 10.7220077 10.3978787 7.5533390 6.4957000 10.7178125 10.4663538 NA 0.9721044 12.9908600 9.3844857 10.2963188 7.6014945 5.1420621 13.7525242 11.0442708 11.3738177 10.9625968 9.1167965 11.5989880 10.7110749 8.1594904 9.6419090 10.9234229 10.0542873 -1.0279691 NA 7.2337165 8.2575406 12.6403584 9.5083855 7.6829447 2.7794909 9.0253990 12.3405083 1.2940766 8.0137972 8.4498964 12.2100950 3.9721412 3.2940619 TCGA-DY-A1H8 77 1 992 992 rectum stage iiia t2 n1 m0 25-9-2014 female 2000 992 NA rectal adenocarcinoma yes NA 1 white not hispanic or latino 133.39.0 NA NA 1 2 3 3 3 1 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.376240 9.581222 11.536035 9.463055 8.146948 10.033688 3.866384 NA 9.993869 1.664756 6.993869 11.860241 10.214723 10.144526 10.787315 11.808129 -0.0012473 3.6569000 -0.0258030 -0.0228810 0.0087861 0.0087861 0.7541600 0.0012481 0.0000000 0.0000000 0.7562400 0.7562400 0.8958800 0.8958800 0.8522200 0.0325630 0.0457080 0.0393370 0.0393370 0.0169850 1.9055000 1.9055000 1.9831000 0.5604500 -0.8146600 0.0539480 -0.0012473 -0.0080631 -0.0095406 -0.0391220 -0.8626300 -0.0160170 -0.0160170 -0.0258030 -0.0258030 -0.0228810 -0.0228810 0.0041632 0.0087861 0.0012481 0.0374610 0.0000000 0.7562400 0.7600600 0.0029133 0.0101410 0.0325630 0.0325630 0.0873480 0.0457080 0.0393370 -0.0160310 -0.0510460 0.0169850 -0.8597600 -0.8446700 -0.8334100 -0.9510100 0.000 0.000 0.000 0.000 0.756 0.756 0.883 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.158 0.961 -0.845 0.000 0.000 0.000 0.000 0.000 -0.863 -0.863 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.000 -0.201 0.000 0.000 0.000 0.000 0.756 0.756 0.883 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.158 0.961 -0.845 0.000 0.000 0.000 0.000 0.000 -0.863 -0.863 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.000 -0.201 5.0707371 4.9575293 0.9277448 14.3533433 7.4772434 1.9277827 5.0977035 7.1693658 6.5522710 7.5326419 3.3428107 2.5127326 9.6072600 10.4447930 13.8712104 9.9758126 11.8341694 10.6316835 8.8486289 4.8346708 0.9277448 11.2970136 1.6647559 3.5907457 2.6647559 4.5127452 9.7816092 12.0482337 11.5498317 9.2085507 9.1501722 9.7867969 6.0152433 3.0432570 12.1274522 11.9819319 9.5227265 12.8026331 9.7722240 11.5360347 2.8022553 7.0081529 NA 16.2633330 5.2007986 12.3564889 10.4791677 10.0001358 10.0336884 4.4302786 12.3771005 12.5894095 8.3707231 10.6013834 9.5716360 -0.6572177 NA 8.9240179 10.2054547 10.5800273 12.7215186 10.3714141 10.4565595 9.8416666 11.9376085 12.5779341 7.1437169 9.2224006 10.4675849 9.7564452 11.6576838 11.2590701 NA 8.3762405 10.8083838 9.5812221 9.7627775 9.1629962 9.2100961 14.3533433 9.6737341 8.4772438 10.7852425 6.7091390 9.3980998 10.2639145 11.9826102 10.0956160 14.1713010 8.8897117 8.9183567 10.1331659 10.9898260 8.4874755 1.6647559 12.9393565 10.6926514 10.6590989 10.0336884 10.3679569 10.0586850 9.7805695 11.5580470 9.6500181 11.6146713 NA 8.5301695 8.4823687 9.9749038 5.6826660 12.4254654 7.0081529 6.6826674 7.9126732 6.3315028 6.4302803 9.4513418 9.3343392 9.4785266 9.0310676 NA NA 7.3762400 0.3427823 7.8741988 4.8346708 11.9228403 9.4382145 10.7553872 11.8027612 0.3427823 10.8396711 15.5664420 10.0389156 9.9938691 10.3364634 10.3844765 5.9721734 1.6647559 10.5295506 10.3279121 NA 3.6647445 13.2452867 9.7014685 10.2246961 7.7899007 3.1501697 13.1405802 9.4721004 10.5473885 11.1404789 10.1445257 12.1804453 10.0604937 7.7648822 10.5039492 11.8938046 10.7873146 0.9277448 1.6647559 8.6072833 7.7981445 13.7781620 10.4578610 7.9464437 0.3427823 8.9219257 9.2224006 5.2735532 8.0467208 9.0775269 11.9357415 4.4720978 7.5954828 TCGA-EF-5830 54 0 NA 15 rectum stage iib t4a n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 NA white not hispanic or latino 102.35.0 NA NA 4 1 3 6 3 1 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.75596645 11.14346051 11.25230702 8.67449561 8.94227756 10.20494155 0.01449813 -0.98535905 10.95957753 2.01449813 7.47802371 10.24871829 9.73901350 9.38191428 10.37095151 11.43840332 -1.5553e-01 -1.8441e-01 -2.7210e-02 -1.0574e-03 4.3600e-01 4.3600e-01 1.0494e+00 7.3455e-02 1.2885e+00 3.5999e-02 -1.7340e-02 -1.7340e-02 7.7599e-01 7.7599e-01 7.7599e-01 -4.8791e-01 1.2452e-01 -6.9871e-01 1.4908e+00 1.7383e-01 8.9916e-01 8.9916e-01 8.9916e-01 -1.1973e-02 -1.4909e-01 -1.4909e-01 -1.4909e-01 2.5386e-02 2.9799e-02 -8.7233e-05 -3.0364e-02 -5.4505e-02 -1.4865e-02 -3.0848e-02 -2.7210e-02 4.8456e-02 2.0904e-03 7.2345e-01 -7.8181e-01 -1.6928e-02 6.0132e-02 3.5999e-02 -1.7340e-02 1.9694e-02 3.8842e-02 5.8990e-02 -7.2602e-01 -7.2602e-01 1.2452e-01 1.0094e-01 -7.0898e-01 -7.5647e-01 -7.5647e-01 1.7383e-01 7.3887e-02 -7.4130e-01 6.4707e-02 -1.1973e-02 -0.743 -0.743 0.000 0.000 0.000 0.000 0.776 0.000 -0.726 0.101 0.101 -0.699 -0.699 -0.756 -0.756 -0.498 -0.549 -0.149 -0.149 0.000 0.796 0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.723 0.723 0.214 0.985 -0.129 -0.129 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.776 0.000 -0.726 0.101 0.101 -0.699 -0.699 -0.756 -0.756 -0.498 -0.549 -0.149 -0.149 0.000 0.796 0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.723 0.723 0.214 0.985 -0.129 -0.129 0.000 6.41537841 4.40681555 2.59946063 15.72191169 8.97884057 0.01449813 9.06298648 13.41851016 10.44285975 8.22395294 3.76939092 3.47392975 9.39062491 9.94523693 12.41977401 10.38409688 12.03113376 9.62920943 7.61812557 5.98028355 2.18443900 9.88332206 1.33645479 8.45744326 7.14892597 8.70449748 9.34092895 10.22760379 12.22790761 9.56908850 7.30451834 9.98891414 5.93336254 4.01449813 12.25692938 12.97332413 8.88486437 13.38102670 6.22395342 11.25230702 4.71493785 8.27424302 -0.98535905 13.35253951 4.71493785 12.25767355 9.15020881 9.91838146 10.20494155 7.76604384 11.87481064 8.48210529 7.41964085 11.21631717 9.31599568 NA 0.01449813 9.36433364 10.26775617 11.37699140 13.28916891 10.80647640 5.98028355 8.76938695 11.84223923 13.13059981 7.57291998 9.96432628 10.44338308 7.39820413 11.6776129 10.9810050 -0.9853591 8.7559664 11.5148435 11.1434605 9.3022119 9.4759790 8.3632276 15.7219117 8.7826838 8.7876388 9.8678091 7.9001960 8.1412039 10.7304616 11.3887240 8.4362697 14.5129748 8.6474948 9.4780239 10.2074087 11.5534160 8.4175116 1.3364548 12.0077918 10.3976638 11.1243302 9.9355966 9.2348780 9.3241691 10.0116790 10.6882503 10.4770018 12.4195572 NA 9.0451666 8.0832777 9.9831663 7.1693177 12.2152449 8.2742430 3.4739297 7.8218543 7.3498898 9.5133488 10.4349861 9.3489740 10.0697820 9.7693871 6.7355993 NA 6.7693870 0.5995082 9.6227543 3.8724840 11.7209956 8.6637559 10.3791814 9.5546276 1.8218735 10.1125316 14.1980186 9.2030883 10.9595775 10.5008318 10.0437869 8.0368676 2.9213982 10.0166114 10.4093105 NA 2.7149488 12.2173886 9.3162931 9.8925506 7.4025167 4.8724791 13.1309248 11.1376510 11.6204420 10.4089623 9.3819143 12.0525612 10.3459764 8.1204079 9.9459758 11.3914389 10.3709515 NA 2.8218530 7.7877047 5.8971436 13.1750801 9.4952898 8.6709246 NA 9.4491903 9.9643263 2.7149488 7.3409289 7.1230236 11.6222922 4.4407662 3.6583600 TCGA-EF-5831 72 0 NA 73 rectum stage iia t3 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 NA white not hispanic or latino 102.35.0 NA NA 3 3 3 6 1 1 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.160822 10.687654 11.170353 8.024274 9.618840 10.547493 2.508581 NA 11.510686 1.923606 8.790891 10.611425 10.696339 10.058038 10.097913 11.694276 0.0098795 0.0076392 -0.0521260 -0.0081624 -0.0177500 -0.0177500 0.7763700 0.0252500 0.4112800 0.0926050 0.0000000 0.0000000 1.3877000 1.3877000 0.0719660 0.0791590 0.0652260 -0.3795400 1.1262000 0.0676610 1.1512000 1.1512000 1.2078000 -0.0032332 -0.3714400 0.0255310 0.0098795 0.3456700 0.4408800 0.4241000 -0.4124500 -0.4124500 -0.9177000 -0.0094046 -0.0521260 -0.0081624 -0.0081624 0.0039088 -0.8942700 0.0108730 -0.4062800 -0.0105780 0.0000000 -0.0448270 -0.0627640 -0.0595380 -0.4071600 -0.3967500 0.0652260 0.0652260 -0.4023000 -0.4135500 -0.4307600 0.0676610 -0.4149800 -0.8451500 -0.3734700 -0.0032332 0.000 0.000 0.405 0.000 0.000 0.000 0.000 0.000 -0.407 0.000 0.000 -0.323 -0.323 -0.890 -0.414 0.000 0.000 0.000 0.000 0.736 1.151 0.000 -0.399 -0.076 0.317 0.424 0.424 -0.412 -0.412 0.362 0.000 0.000 0.000 0.788 0.000 -0.877 0.000 0.980 0.980 0.000 0.000 0.000 0.405 0.000 0.000 0.000 0.000 0.000 -0.407 0.000 0.000 -0.323 -0.323 -0.890 -0.414 0.000 0.000 0.000 0.000 0.736 1.151 0.000 -0.399 -0.076 0.317 0.424 0.424 -0.412 -0.412 0.362 0.000 0.000 0.000 0.788 0.000 -0.877 0.000 0.980 0.980 0.000 7.04255351 5.50857444 3.44716921 15.63217007 8.70168905 3.24554130 10.29865133 -0.07643243 10.74299272 8.80012885 5.73096595 3.38304067 9.45791476 10.09353694 12.72208374 10.07526280 11.46083034 10.25620798 8.76596232 9.30623603 3.96800778 11.50151279 1.73096595 7.07843051 6.54566417 9.13184642 9.75571081 10.89047785 11.90053401 9.53463672 8.12818306 10.81994435 6.91796515 4.44717582 13.07914172 12.89730930 9.93832990 13.62545984 7.09353694 11.17035255 5.94597985 8.87780835 -0.07643243 14.71688501 4.31592845 12.49049843 10.75055760 10.11281870 10.54749340 8.25228697 12.32502482 8.71151452 8.40339215 10.93063918 10.80434338 0.50853007 -1.07643243 9.53924161 10.11343654 12.89981802 11.99071010 10.79628683 5.46277218 9.18805444 12.10709226 13.44017378 6.31592845 9.91158643 11.94909759 7.74379095 11.81064212 10.51793655 -1.07643243 9.16082189 11.65386977 10.68765413 9.27012570 9.76202801 8.45499343 15.63217007 8.41946684 8.56204776 10.24610342 7.78779811 8.80778251 10.62881232 11.13975150 9.27767400 13.94102933 8.57645676 9.82824663 10.41646652 10.22796328 8.07589679 6.56023652 11.42694081 11.50387050 10.72612831 9.89371790 9.82975095 8.53432312 9.60660657 11.38278736 10.23081280 12.33220705 NA 8.83799715 8.84842452 10.49299288 7.66507863 12.54817896 8.87780835 8.61884026 7.94875151 8.61709898 9.49061726 10.55842301 9.02032718 8.07335914 9.19740765 NA NA 6.83650109 -1.07643243 8.63785727 4.85434979 11.20698973 8.90945391 11.09040265 10.02295975 -0.07643243 10.50951336 13.92171750 9.16559518 11.51068620 10.69510142 9.78392297 8.92501999 3.83049873 9.67096582 10.31691663 -0.07643243 6.42345716 12.60770303 9.13306539 10.70415170 7.74493943 4.38304067 12.34790946 10.74618275 11.64705956 10.86429256 10.05803828 11.59316139 10.47820082 7.87780804 10.13732369 11.35876129 10.09791348 NA NA 8.21565724 2.09352637 14.00455434 10.19973638 9.54749340 -0.07643243 8.83473428 9.91158643 NA 6.91796515 8.12082883 11.78198154 4.44717582 7.26346170 TCGA-EI-6506 78 0 NA 625 rectum stage iia t3 n0 m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 1 2 2 5 2 2 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9532647 11.5400249 12.5200241 8.6923874 9.3048667 10.3745845 -0.2791087 NA 10.5861903 2.1802752 8.2811766 10.4551299 9.9717342 9.8073118 10.5465976 11.8854364 0.23824000 0.23892000 1.34920000 0.13509000 -0.01174900 -0.01174900 -0.01174900 -0.00103060 0.45343000 -0.00517120 -0.00415460 -0.00719010 0.45598000 0.45598000 0.45598000 0.00360760 -0.01119800 -0.01508200 -0.01508200 0.17029000 0.87727000 0.87727000 0.85977000 -0.00429290 -0.24290000 -0.24290000 -0.22973000 0.42860000 0.00986690 0.01349200 0.00416320 0.00416320 -0.00013862 -0.23300000 -0.23300000 0.13509000 0.13509000 -0.08266800 -0.01174900 -0.00103060 0.00346870 -0.00332430 -0.00415460 -0.00858320 -0.46142000 -0.47480000 0.00360760 0.00360760 -0.01119800 -0.02288100 -0.01508200 -0.46972000 -0.46972000 0.17029000 0.87727000 -0.23594000 -0.25878000 -0.00429290 0.000 0.000 0.000 0.000 0.000 0.000 0.456 -0.461 0.000 0.000 0.000 0.000 0.000 -0.470 -0.470 0.228 0.228 -0.214 -0.214 0.877 0.877 -0.236 -0.259 0.427 0.000 0.000 0.000 0.000 0.000 -0.233 -0.233 0.135 0.135 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.456 -0.461 0.000 0.000 0.000 0.000 0.000 -0.470 -0.470 0.228 0.228 -0.214 -0.214 0.877 0.877 -0.236 -0.259 0.427 0.000 0.000 0.000 0.000 0.000 -0.233 -0.233 0.135 0.135 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.770692 4.578824 3.475733 15.079237 9.935770 3.890768 8.676494 2.305795 10.856874 9.201634 7.155472 4.627735 8.816241 11.232102 12.074955 9.446210 10.758734 10.174629 8.937590 -1.279284 4.006244 11.789790 3.627735 6.260003 9.373689 7.498921 9.995804 11.075919 11.794651 10.195564 8.571031 10.624726 7.609587 5.732071 12.716876 13.140804 10.121190 13.095204 7.999293 12.520024 5.212698 8.831980 2.528196 13.099206 5.163789 11.860875 10.361089 10.299688 10.374584 7.518505 12.910359 9.291648 8.887007 12.117582 10.844319 2.528196 -1.279284 10.085526 10.319362 11.903393 12.540923 11.050079 8.898263 9.373689 12.205289 13.528802 7.082788 10.214699 10.542219 7.715197 11.6023401 11.3761508 0.3057955 8.9532647 11.6804835 11.5400249 9.2859459 9.1153064 9.1471085 15.0792367 8.3718955 7.1386967 10.7573608 8.5850297 9.0783958 10.9858727 10.8623123 10.0147464 14.3503142 8.4606242 9.6633583 9.9580537 9.1131611 7.9616349 8.5772691 11.5178972 10.7031243 11.2224321 10.6754036 10.4576685 9.4260527 9.4757312 11.0767453 10.2826090 12.7572809 NA 9.3309458 8.8857507 9.9050992 9.4997423 14.1533530 8.8319795 8.2106918 8.4453576 8.1281114 10.9427329 9.7611335 8.2126968 8.4707130 8.6486218 1.3057955 NA 7.9992931 NA 9.8680487 6.0062464 11.5778527 9.5647647 10.3561084 9.5647647 NA 10.7583907 13.3729604 9.8109562 10.5861903 10.8603951 10.3076835 9.0695719 4.9876301 10.6837397 11.3196244 NA 8.6880698 13.1056275 10.4698751 10.3754798 7.8680484 7.5120064 12.6025313 10.6489920 10.9849931 11.3186635 9.8073118 12.4021920 10.8136008 8.7418236 10.5865770 11.6755853 10.5465976 1.5282212 -0.2791087 7.8233443 6.4419432 14.0388569 9.9075771 9.0717828 2.1802752 9.1344928 10.2146992 5.2600031 8.6322359 6.8293676 11.8794534 5.2286379 7.7151974 TCGA-EI-6507 60 0 NA 607 rectum stage iia t3 n0 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 1 2 2 5 1 1 4 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.3051479 12.5330552 11.4985461 8.1482244 9.5229401 11.2821087 -0.1826223 -0.1826223 10.5194804 -0.1826223 8.6230515 10.6834275 10.8524505 11.0273763 9.8867574 10.9581375 0.00166420 0.00166420 -0.00166290 0.00013863 -0.00581400 -0.00581400 -0.00581400 -0.00609040 0.00069327 0.00069327 0.52171000 0.52171000 0.00000000 0.00000000 0.00000000 0.00097064 -0.00857660 -0.00401620 -0.00401620 -0.02082400 0.00652620 0.00652620 0.00110450 0.04202400 0.00166420 0.00166420 0.00166420 0.00138680 0.00152550 -0.58068000 -0.00342530 -0.00342530 -0.00377830 0.01642500 -0.58274000 0.00013863 0.00013863 -0.00443120 -0.00581400 -0.00609040 -0.00609040 0.00069327 0.52171000 0.52031000 -0.00124730 -0.00124730 0.00097064 0.00097064 -0.00857660 -0.00857660 -0.01363800 -0.00221680 -0.00221680 -0.02082400 0.00652620 -0.01037000 -0.01023200 0.04202400 0.000 0.000 0.000 0.000 0.522 0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.522 0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6907520 7.6019423 2.9872299 13.8947902 9.2602513 9.8382876 9.1392359 0.4022856 8.8752994 9.1324573 7.6968910 5.3871626 8.7612876 11.3146606 12.5873521 9.4088301 10.7473057 11.1901728 10.5405420 7.4967875 5.2096249 10.7268259 5.0267602 6.4022702 1.4022856 6.9310495 10.197769 10.212306 11.960691 9.714397 8.765675 10.880028 8.111929 4.026765 10.758722 13.309098 10.119947 13.369677 7.243488 11.498546 9.242524 10.673344 1.817296 13.891658 5.402269 10.537124 9.363237 11.233049 11.282109 8.938841 12.746474 9.214982 10.214447 10.459359 11.787054 1.817296 NA 10.565920 10.404616 12.028892 10.006515 10.866816 9.335980 8.756887 11.633291 12.801192 7.387163 10.168799 9.664365 7.069973 11.6208334 10.7064314 3.9047731 7.3051479 11.8417548 12.5330552 10.5759473 9.7037664 9.9809574 13.8947902 2.5177544 7.5384070 10.3881121 10.6015336 9.0545178 11.4507571 11.5678053 9.8100478 14.3395827 8.8229321 10.2277590 8.9972167 9.4629662 8.2160513 6.1119285 11.7305711 10.8572549 8.3661294 10.5431000 10.4209340 9.6553534 9.4292546 11.4815328 10.1543721 12.3211868 NA 9.3632375 9.2228533 9.8719120 9.6698371 12.8685166 10.6733441 7.5721954 10.6198241 7.6182078 9.3211335 10.0840943 9.2117703 8.8114065 9.6953586 8.1256470 7.1165155 8.5953847 -0.1826223 9.1748598 5.8617023 10.7783956 9.1414882 10.3680545 11.3198909 NA 10.6710071 14.0959749 10.8569123 10.5194804 10.3847885 9.8534813 9.6945919 5.1027085 11.1635444 10.4111144 NA 8.1459826 11.9566992 10.6616212 10.6911363 7.6182078 6.6876724 12.8364640 10.5246669 10.4714962 11.0361736 11.0273763 11.5007410 10.0616716 9.2602513 11.0870188 11.7805651 9.8867574 0.8172958 4.3718934 7.4394328 2.6246624 13.6484665 10.3970950 9.1901728 0.4022856 8.5632005 10.1687991 6.7361705 9.1403625 7.7539454 12.2682612 4.7715053 5.8507319 TCGA-EI-6508 48 0 NA 636 rectum stage iiib t3 n1a m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 1 white not hispanic or latino 122.34.0 NA NA 1 3 3 4 2 2 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.649492 11.644911 12.327951 8.455352 9.800122 9.989600 3.064521 -1.459179 11.252634 2.000397 8.280748 10.626108 9.876357 9.548534 10.471704 8.089789 -1.2473e-03 0.0000e+00 1.3213e-02 2.4548e-02 -1.0094e-02 -1.0094e-02 -1.2131e-02 9.1705e-03 6.9327e-04 9.5883e-03 -8.5766e-03 -7.7073e-01 7.3891e-01 7.3891e-01 3.4687e-03 4.0243e-03 -1.5054e-02 8.9561e-02 -8.0881e-01 -1.4090e-02 6.2843e-01 6.2843e-01 6.2843e-01 -7.5345e-02 1.9374e-02 -6.9303e-04 -1.2473e-03 -8.5766e-03 -7.2818e-01 -7.2967e-01 9.5883e-03 -7.7082e-01 9.1705e-03 2.3987e-02 1.3213e-02 2.4548e-02 2.2585e-02 3.9478e-02 -2.1270e-02 -2.4372e-02 9.1705e-03 -8.1424e-01 -7.7073e-01 -5.0469e-05 -7.8833e-01 -9.6806e-03 1.4609e-02 4.0243e-03 -1.5054e-02 -6.4374e-02 -7.7082e-01 -8.0939e-01 -8.0939e-01 -1.4090e-02 6.2843e-01 -4.2112e-01 -8.4619e-01 -7.5345e-02 0.000 0.000 0.000 0.000 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 0.000 0.000 -0.780 0.000 0.000 0.000 0.000 0.628 0.628 -0.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.749 0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 0.000 0.000 -0.780 0.000 0.000 0.000 0.000 0.628 0.628 -0.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.749 0.749 0.000 0.000 0.000 0.000 0.000 6.140881 3.933280 3.398952 14.214800 9.785925 4.373857 10.414796 5.639001 9.632403 8.289160 5.255214 2.933289 8.553592 10.955388 12.145173 9.037821 11.526275 9.599635 8.821738 6.988051 3.750424 9.492980 NA 8.493709 7.302518 7.625775 10.1947080 10.9203455 11.8974191 9.9391765 9.1911214 10.3223268 7.3989480 4.5409696 12.3299913 12.8062892 9.7443152 12.3730660 7.0447930 12.3279514 4.7307921 8.7565003 1.5409696 13.0577136 2.3483174 12.3103918 10.3623425 10.5549876 9.9895997 7.0684440 12.4554457 9.1775917 8.3370068 11.2918835 10.7298650 -0.4589808 2.4478701 10.3239654 10.3958355 10.8544171 11.6192847 10.9227805 7.1183961 9.3981706 11.8263694 13.4118616 6.3675161 10.3667210 10.5211067 8.1830190 11.6742699 11.1155607 0.8629076 9.6494915 11.1322557 11.6449106 9.6211185 9.4605755 8.8401752 14.2147996 8.3058388 7.9651332 9.6900792 8.6310795 9.2178058 11.1259296 10.8141800 10.4767289 14.2586436 9.3603480 9.7649688 9.6837124 9.2388036 8.1830190 6.0408135 11.9018142 10.4020540 11.1707791 10.2257157 10.3778065 8.4222952 8.9214283 11.3981706 10.7301740 12.9842028 NA 8.9609272 8.4657056 9.7971758 9.5826264 14.5452754 8.7565003 9.0635488 7.3515391 9.2257157 10.3742526 10.2731346 10.5876819 8.8549840 9.6932521 -1.4591792 -1.4591792 6.7258420 1.8629076 9.5218207 4.8263705 11.1434340 8.8100938 10.2195673 10.1478350 2.5409696 10.7211871 13.3019469 9.9625061 11.2526341 10.8436061 10.1730536 9.2186867 4.7504189 11.3915447 10.6979540 0.1259155 6.3989489 12.4778811 10.3186334 10.3891988 8.3190443 6.7697863 12.9862407 10.6881721 10.0655089 10.9846877 9.5485341 12.1989554 10.6127647 8.5038631 11.9427800 11.8589450 10.4717045 1.1259155 0.1259155 8.2493614 7.0368220 13.8709386 10.3702934 9.7853310 0.8629076 9.0465009 10.3667210 8.3025183 8.8561167 7.2344544 12.2379347 4.2958552 4.7697876 TCGA-EI-6509 53 0 NA 517 rectum stage iiic t3 n2b m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 7 white not hispanic or latino 122.34.0 NA NA 4 2 3 4 3 1 2 2 4 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.378836 12.058180 18.965552 7.390710 8.963798 10.436298 2.334454 -1.125006 10.288638 3.122938 8.309638 11.051495 10.158099 7.305463 10.212075 11.492248 0.05508800 0.03735900 0.00092978 0.01544700 0.75951000 0.75951000 0.76362000 -0.12200000 -0.82684000 -0.83284000 -0.14734000 -0.14734000 2.21900000 2.21900000 2.22080000 0.01167900 0.01740400 3.65690000 0.03298600 -0.78193000 0.82196000 0.82196000 0.82470000 -0.06474200 -0.04928900 -0.04928900 -0.79978000 0.00291330 0.01992300 0.00124810 0.00819590 -0.82195000 -0.82195000 -0.01174900 -0.01174900 0.01544700 0.01544700 0.01098200 0.75951000 -0.12200000 -0.12200000 -0.83284000 -0.14734000 -0.14734000 -0.10026000 -0.10026000 0.01658500 0.01658500 0.01740400 0.01740400 -0.81145000 -1.29290000 -0.83057000 -0.78193000 0.82196000 0.01796300 0.01698500 -0.06474200 -0.122 -0.122 -0.827 -0.827 -0.147 -0.147 2.221 -0.100 0.000 0.000 0.000 -0.491 0.321 -0.822 -0.822 0.000 0.000 0.000 0.000 0.822 0.822 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.822 0.000 0.000 0.000 0.000 0.000 0.000 0.760 0.760 0.000 0.000 0.000 -0.122 -0.122 -0.827 -0.827 -0.147 -0.147 2.221 -0.100 0.000 0.000 0.000 -0.491 0.321 -0.822 -0.822 0.000 0.000 0.000 0.000 0.822 0.822 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.822 0.000 0.000 0.000 0.000 0.000 0.000 0.760 0.760 0.000 0.000 0.000 6.568497 6.846553 3.629893 15.451538 10.360336 5.044936 10.449604 8.315880 10.144721 7.748455 4.575452 1.459956 9.062362 10.952827 12.942697 10.785278 10.993627 9.999778 9.156940 10.643195 4.962475 11.973207 -1.125006 4.656371 6.701559 7.245697 9.7834028 11.0126419 12.1684819 9.9370564 8.6580083 11.0136020 5.9518256 1.8749936 11.9583234 12.6104605 9.1217508 13.2490988 6.7267590 18.9655517 7.0941791 10.1895934 -0.1250064 14.8247686 4.8057465 11.7854656 10.4029759 10.5658812 10.4362981 8.4599725 12.4632564 9.2059271 8.1417965 9.1511345 10.7542106 NA 2.3344539 10.2896955 10.5434521 12.1457436 12.1439907 11.2095628 7.8778252 9.1347536 12.2036851 13.5619484 6.5684973 10.7975947 11.1002176 7.5403458 11.954828 11.253576 1.459956 8.378836 11.229260 12.058180 9.504367 9.338535 8.698378 15.451538 9.860141 9.151135 10.175363 5.973042 8.340577 11.331365 11.173073 9.630816 14.809369 9.113415 9.232562 10.455269 11.020624 6.406392 1.196922 11.737454 11.822465 10.780021 10.673482 10.598245 7.612663 8.947813 11.065452 10.006867 12.907213 NA 9.852290 8.924859 10.459033 6.141797 12.390710 10.189593 7.646500 8.256553 8.091756 8.736097 10.227054 8.641539 6.489720 10.439160 1.874994 NA 7.187893 1.196922 9.889031 5.004295 10.867595 8.431516 10.683572 9.819722 -1.125006 10.078358 14.270176 9.368866 10.288638 10.916669 9.961810 8.247875 5.122938 11.759181 9.772349 NA 2.044919 13.079963 11.169344 10.540346 7.425757 6.511634 13.919789 10.722459 10.182780 10.434387 7.305463 13.002037 9.955162 9.291808 10.900150 11.079887 10.212075 NA NA 9.072055 4.602932 14.243926 9.459033 9.340577 -1.125006 9.072485 10.797595 2.781905 8.836460 8.185623 12.254659 5.004295 8.120563 TCGA-EI-6510 77 0 NA 556 rectum stage iva t2 n0 mx 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 1 3 3 3 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 6.8371170 11.6771664 13.1346147 8.1373498 9.3159918 10.4744985 -0.2290441 NA 10.5560712 3.2945913 8.3930794 7.9105786 10.6452403 10.4862001 10.0348834 11.4980970 -0.01298900 -0.01298900 -0.84227000 -0.00691950 -0.05212600 -0.05212600 -0.05212600 -0.03258400 -0.03449500 -0.03449500 0.52363000 0.52363000 0.78138000 0.78138000 0.75576000 0.01014600 0.00000000 0.19649000 0.19649000 0.01999900 0.73057000 0.73057000 0.73057000 0.34047000 -0.01298900 -0.01298900 -0.01298900 -0.00052166 0.71453000 0.70612000 0.62115000 -0.05994200 -0.05994200 0.01614600 -0.84227000 -0.00691950 -0.03498400 0.71754000 -0.05212600 -0.03258400 -0.02272200 -0.03449500 0.52363000 0.51699000 -0.04211000 -0.05421100 0.00488910 0.01014600 0.00000000 0.00000000 -0.25079000 -0.26240000 -0.26240000 0.01999900 0.73057000 -0.05131600 -0.03108600 0.34047000 0.000 0.000 0.000 0.000 0.524 0.524 0.756 0.000 0.000 0.000 0.000 -0.054 0.196 -0.262 -0.262 0.000 0.000 0.000 0.000 0.731 0.731 0.000 0.000 0.000 0.000 0.715 0.715 0.621 0.000 0.000 0.000 0.000 0.000 0.718 0.718 0.000 0.000 0.000 0.000 0.340 0.000 0.000 0.000 0.000 0.524 0.524 0.756 0.000 0.000 0.000 0.000 -0.054 0.196 -0.262 -0.262 0.000 0.000 0.000 0.000 0.731 0.731 0.000 0.000 0.000 0.000 0.715 0.715 0.621 0.000 0.000 0.000 0.000 0.000 0.718 0.718 0.000 0.000 0.000 0.000 0.340 5.1108768 4.4148865 2.2304490 16.1224578 9.8624629 3.7710298 10.2703751 5.1972914 11.5329941 9.6876533 5.8371157 3.7710298 9.3774327 10.6437024 12.6468728 9.6413921 11.4742822 9.8424897 8.4076519 -0.2290441 2.0929516 10.9195040 3.2304643 7.5292509 7.9384458 8.1438923 9.8697175 10.6444715 11.3268148 9.9986433 7.9334186 10.9022413 7.8690595 5.9901970 12.7515241 13.3770856 9.3939944 12.7800687 7.0884406 13.1346147 4.7252231 6.8847701 2.9409560 13.9701246 4.3559888 11.9589980 11.1033437 10.4522659 10.4744985 5.7710272 11.9272686 8.8438300 9.0260561 12.7215833 10.7940887 -0.2290441 -0.2290441 9.7150074 9.9914058 12.5381773 13.4063488 11.0787975 8.1482381 8.4627710 11.3571635 12.9287691 6.8154217 9.8651052 10.5023464 7.7252238 11.687280 10.793395 -1.229044 6.837117 11.534240 11.677166 9.590408 9.506583 9.464514 16.122458 8.636761 8.081640 9.800315 8.348456 9.337082 10.673026 11.335415 9.256676 14.204026 8.638306 9.277831 10.124174 9.864445 7.290664 8.969473 11.894987 11.301190 9.831048 10.167632 10.080504 8.076268 9.230459 11.179888 10.461462 12.455339 NA 8.700286 9.300458 10.777704 10.184655 12.465385 6.884770 8.565443 5.539212 6.915686 9.526750 10.235573 9.734234 8.486989 8.201480 NA NA 7.154732 NA 9.963937 4.262884 11.130502 8.914411 9.766795 10.825293 1.578359 10.484414 14.088970 9.717934 10.556071 10.641007 9.755446 8.831723 6.270873 10.923946 11.381563 NA 8.763966 12.683075 9.785048 10.461462 7.407725 6.340883 12.933891 10.836780 11.247774 10.172440 10.486200 11.824784 10.449187 8.457528 10.632611 11.436585 10.034883 1.578359 NA 7.958157 5.641393 13.365760 9.920775 9.654434 2.356003 8.747534 9.865105 -1.229044 8.603917 6.889969 11.771380 3.294591 7.407652 TCGA-EI-6511 52 0 NA 482 rectum stage iiib t3 n1 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 4 white not hispanic or latino 122.34.0 NA NA 3 2 2 5 3 1 2 2 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8574309 10.7605601 11.6525665 8.5292650 8.8216104 10.6831997 4.0382342 0.7528342 10.1611617 1.3377682 8.1278716 10.8814708 9.7654565 9.6689950 10.3601623 12.7055733 0.01530800 0.00295860 -0.03952900 1.76620000 0.55283000 0.55283000 0.55283000 0.00458000 0.00000000 -0.00065081 0.01419000 0.01419000 0.59152000 0.59152000 0.55313000 0.04202400 0.05352100 0.06837800 0.06837800 0.07685400 1.74770000 1.74590000 1.80470000 0.05039200 -0.60680000 -0.60680000 -0.60593000 -0.00885260 -0.01188700 -0.01405300 -0.11857000 -0.10933000 -0.11430000 -0.03952900 -0.03952900 -0.50432000 0.45669000 1.07760000 -0.64800000 0.00458000 0.00458000 -0.00065081 0.01419000 -0.00176750 0.01201200 0.01983500 -0.55614000 -0.54391000 0.05352100 0.04605600 0.06837800 -0.62265000 -0.62265000 0.07685400 -0.59935000 -0.59964000 0.08666600 0.05039200 0.000 0.000 0.000 0.000 0.000 0.000 0.553 0.000 -0.543 0.000 0.000 0.000 0.000 -0.623 -0.623 0.000 0.000 -0.606 -0.606 1.147 1.746 -0.600 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 1.766 1.766 1.057 1.057 -0.620 -0.067 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.553 0.000 -0.543 0.000 0.000 0.000 0.000 -0.623 -0.623 0.000 0.000 -0.606 -0.606 1.147 1.746 -0.600 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 1.766 1.766 1.057 1.057 -0.620 -0.067 0.000 0.000 0.000 8.256658 6.252679 2.560177 14.294956 8.542366 5.439334 8.172792 2.212258 10.323636 10.461916 8.393077 5.659722 9.882115 10.303098 11.910179 9.895577 11.235136 9.147295 9.409257 8.593610 4.560189 12.466433 5.074758 8.031282 5.162222 8.836311 9.782119 11.247938 12.215973 9.702659 8.568215 10.127328 7.119154 7.191624 12.388323 13.131262 10.007270 12.794406 6.553732 11.652567 7.556963 8.784878 3.453267 14.799743 4.585720 12.960228 9.663475 10.281774 10.683200 9.000759 12.352047 7.947589 8.946357 10.660474 10.328371 1.337768 1.337768 10.192663 10.334033 11.634520 12.782982 10.757755 7.732971 8.906384 12.256782 13.290900 6.861356 10.417724 11.153445 7.988846 11.1001766 10.1136791 0.7528342 8.8574309 11.5813652 10.7605601 8.8730700 9.0713749 8.9720004 14.2949555 8.5077193 8.5143831 10.0457288 9.4816029 8.6820904 11.0474528 11.3953350 8.9039882 14.3842080 8.2486871 9.6014549 8.8626628 9.7944911 8.3858270 9.4367038 11.6495428 10.7001036 11.0503215 9.5068843 9.5093883 8.7492771 9.5292650 11.1921435 9.6521889 12.3404630 NA 9.3555308 7.9840054 10.1600997 10.6430963 13.8067579 8.7848776 4.7070278 7.5761994 8.4358265 10.2310960 10.3508845 8.8360987 7.4523006 9.2616171 -1.2470802 NA 8.5537318 -1.2470802 9.1769984 6.2285648 11.6608493 9.2871350 10.5983220 9.6872600 2.8403021 10.8939812 13.6527553 10.1685737 10.1611617 10.6139189 9.4419565 8.7765863 4.9816518 10.2441841 10.5899001 NA 10.2346315 11.9127033 9.2939286 10.4248153 6.9960056 6.1957748 12.2067456 10.3490218 11.0312815 11.2353879 9.6689950 11.9314968 9.9713953 8.6185654 10.1769983 11.0336028 10.3601623 2.5601769 0.3377682 7.4451688 6.4038829 13.7227131 9.0993457 9.0184470 4.4532739 9.1377453 10.4177236 5.6231967 9.0531847 7.9960062 11.7958593 4.4252579 5.7186164 TCGA-EI-6512 64 0 NA 538 rectum stage iiib t3 n1 m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 1 white not hispanic or latino 122.34.0 NA NA 1 3 3 3 2 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2933394 11.7275924 11.6540779 7.9714113 9.0277067 10.4376342 5.3042810 -0.2035684 10.7194416 -0.2035684 8.0204872 11.2739909 9.9513037 9.8056984 10.7809040 12.0601949 0.0028612 0.0030522 -0.0023553 0.4583300 -0.0290180 -0.0290180 -0.0124380 -0.0037395 -0.0071958 -0.0071958 0.4165600 0.4218300 0.8639400 0.8639400 0.8623300 -0.0328600 0.4420800 -0.1166800 -0.0834650 0.3191700 2.4639000 2.4648000 2.4695000 0.1146200 -0.0247980 -0.0247980 0.0028612 -0.0053992 0.0599370 0.0201050 -0.0144330 0.0095804 -0.0030037 -0.0023553 -0.0023553 0.4583300 0.4549000 0.4499500 -0.0290180 -0.0037395 -0.0037395 -0.0160170 0.4165600 0.4154900 0.3191600 0.3079300 -0.0328600 -0.0328600 -0.0498300 0.4420800 -0.1166800 -0.4842800 -0.4842800 0.3191700 -0.4968400 -0.4987100 -0.1424500 0.1146200 0.000 0.000 0.000 0.000 0.417 0.417 0.862 0.321 0.000 0.442 0.442 -0.117 -0.117 -0.485 -0.485 0.339 0.339 0.000 0.000 1.967 2.464 -0.499 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.458 0.458 0.450 0.450 0.000 0.000 0.000 0.000 0.102 0.000 0.000 0.000 0.000 0.417 0.417 0.862 0.321 0.000 0.442 0.442 -0.117 -0.117 -0.485 -0.485 0.339 0.339 0.000 0.000 1.967 2.464 -0.499 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.458 0.458 0.450 0.450 0.000 0.000 0.000 0.000 0.102 6.343379 5.100267 3.381450 15.765467 10.398721 2.703367 9.904356 9.735330 10.274244 9.358728 6.482985 3.118410 8.722782 10.611469 12.570964 10.209585 10.925124 9.985692 9.063272 6.154038 3.796484 13.019130 2.118426 6.807713 8.536266 7.354906 9.6598976 11.2214392 13.0194314 9.5371097 8.6198528 10.5320416 7.4618216 3.3814495 11.3094729 13.1450063 9.7463123 13.1371007 6.9547919 11.6540779 5.7153498 8.1363355 2.1184262 14.7381064 4.7272234 12.5834698 8.3278670 10.4732272 10.4376342 8.0934017 12.4555896 8.0956934 9.0479680 11.5561657 10.5807115 -0.2035684 1.3814495 10.0708637 10.2258923 11.3460297 12.5854078 10.9525687 8.2524497 9.8091102 13.0505546 13.4935074 6.7331238 9.9588769 11.4274352 8.4671417 12.1878635 11.3646792 -0.2035684 9.2933394 11.7766252 11.7275924 9.5538756 9.3625396 8.7287005 15.7654666 7.6451086 8.5957673 10.9909347 8.0562291 8.7272228 11.2717124 11.6040418 9.9384458 14.5137872 8.5021181 9.0034999 9.9825998 9.5679751 8.0059389 5.2883401 11.7422952 10.5700370 10.7003674 10.5617717 10.2913412 8.6266206 9.4794802 11.5107311 10.2342376 12.9194130 NA 9.2352773 8.8904841 10.3052707 7.5446786 14.4211097 8.1363355 8.1093684 8.5990019 8.1973651 10.4276626 10.4842987 9.0503330 7.7622697 8.7390002 NA NA 7.8105061 2.3814495 9.6182596 5.1540363 11.5913076 9.4564815 10.2691765 10.1274024 0.3813941 10.9946236 13.9272572 9.4715606 10.7194416 10.4635971 10.5205730 8.9626488 2.3814495 10.8312845 10.4282402 -0.2035684 5.7506815 13.2000303 10.5047073 10.2090555 7.7390002 6.3963993 13.0890229 10.8174655 10.8045640 11.6228354 9.8056984 12.6152675 10.3926754 8.8598807 11.4019651 11.5835719 10.7809040 1.9663936 -0.2035684 8.3515347 5.0059389 14.2281464 10.0644426 9.6262084 0.3813941 9.2809157 9.9588769 NA 8.4093540 8.1584294 11.9533587 4.6544642 4.6293741 TCGA-EI-6513 59 0 NA 497 rectum stage iiib t3 n1 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 2 white not hispanic or latino 122.34.0 NA NA 3 1 2 5 3 1 2 1 4 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.449365 11.487220 12.235682 7.688642 9.438884 10.088458 2.726264 -1.361046 11.013833 1.960734 8.444537 11.306570 9.927083 9.641039 9.642311 11.451171 0.01391100 0.01070300 -0.82994000 0.02544400 0.00097064 -0.05199100 0.76343000 0.00541390 -0.00110870 -0.00110870 0.00750000 0.00750000 0.78841000 0.78841000 0.78841000 0.03228100 -0.02457800 -0.02726100 -0.02829200 -0.29201000 1.38560000 1.38560000 1.38560000 -0.05536400 -0.04309300 0.01159100 0.01391100 -0.01106000 0.06250800 0.02885700 -0.82154000 -0.82154000 -0.80526000 0.01321300 -0.82994000 0.02544400 -0.00346270 0.03891300 -0.85845000 0.00541390 0.00000000 -0.00110870 0.00750000 0.00750000 -0.79911000 -0.81538000 0.05765300 0.03764100 -0.02457800 -0.02849100 -0.87891000 -0.83656000 -0.83656000 -0.86664000 -0.03340500 -0.32426000 -0.05293600 -0.05536400 -0.812 -0.812 0.000 0.000 0.000 0.000 0.788 -0.776 0.000 0.000 0.000 -0.829 0.000 -0.837 -0.837 -0.812 -0.812 0.000 0.000 0.000 1.386 -0.324 0.000 0.000 0.000 0.000 0.000 -0.822 -0.822 0.000 0.000 0.000 0.000 0.704 0.000 -0.095 0.763 0.000 0.000 0.000 -0.812 -0.812 0.000 0.000 0.000 0.000 0.788 -0.776 0.000 0.000 0.000 -0.829 0.000 -0.837 -0.837 -0.812 -0.812 0.000 0.000 0.000 1.386 -0.324 0.000 0.000 0.000 0.000 0.000 -0.822 -0.822 0.000 0.000 0.000 0.000 0.704 0.000 -0.095 0.763 0.000 0.000 0.000 6.951676 4.661162 5.048184 15.651526 10.024116 7.410283 8.174068 4.704883 9.547936 9.626057 6.527536 3.223762 9.593716 10.801184 12.037136 9.610337 11.355827 10.463752 9.893231 8.811221 6.238707 11.409044 2.339223 8.218109 4.768078 7.026810 9.6900020 11.4961910 12.1838782 10.2119669 9.0838080 10.6433647 7.3701120 4.3392300 12.4111077 13.3290094 10.2062739 13.0987370 7.2007682 12.2356817 4.5929892 8.3444255 -1.3610458 14.2174606 7.9149173 13.2063333 10.2686050 10.6753101 10.0884577 7.1346481 11.9746022 8.6246350 8.3802602 10.2048472 11.0809591 -1.3610458 -0.3612311 9.9357093 10.1574462 11.5888021 12.7382231 11.1266332 8.1287816 9.4541763 12.2199937 13.5994286 7.3970166 10.1618649 11.4172810 8.0650579 11.1253768 11.3465836 0.6387689 8.4493649 11.7847253 11.4872204 9.3470149 9.4842832 9.0671533 15.6515262 8.8688136 8.2237556 10.2713340 8.7222724 8.2029427 11.2050850 10.0492444 9.9517271 14.3215683 9.4069775 9.9719484 10.0241163 8.8124703 8.7732193 6.0481839 12.1758902 11.1443566 11.3061265 10.2317173 10.5937164 8.2116829 10.1316477 11.2199937 9.0692457 11.9612509 NA 8.1544931 8.7089142 10.0321835 7.5336108 13.0969434 8.3444255 4.7262536 7.4685157 6.8531124 9.2781337 9.5966206 8.0587532 8.2787124 8.8347804 6.3322801 0.2237932 7.4135805 2.3392229 9.2377762 5.3802584 10.5137745 8.4889801 9.7557867 9.7986644 0.2237932 10.0364678 14.1452867 8.5915343 11.0138325 9.8118456 10.0337916 8.9402892 3.7262536 10.2613026 10.9030363 NA 5.5091574 12.6466088 9.7700071 8.9708298 7.6777119 5.6045784 12.9619886 11.3645854 10.4870248 10.2911899 9.6410386 12.2910779 9.6611610 7.7182780 10.8448918 10.8049562 9.6423110 -0.3612311 4.8952396 8.0676140 5.1465860 12.6802811 10.3667135 9.0257334 -1.3610458 9.2663270 10.1618649 7.1426187 7.9629735 8.7809003 12.5046230 4.4716817 7.7577340 TCGA-EI-6514 59 0 NA 496 rectum stage iia t3 n0 m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 3 3 3 6 3 1 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6824629 11.3733726 13.2451766 7.9845609 8.4002322 10.1547675 3.5871609 0.4172719 11.1144957 6.8546440 8.7057202 10.7578304 10.4228631 10.0079377 9.3321218 11.2243250 -0.036265 -0.062051 0.354790 0.000000 0.134500 0.134500 0.134500 -0.162940 0.317070 0.298350 -0.137810 -0.137810 1.734200 1.734200 1.674200 -0.549950 0.432940 0.445790 0.445790 0.416800 2.271700 2.271700 2.236500 0.092460 -0.046120 -0.046120 -0.036265 0.327660 -0.062226 0.443080 -0.085855 -0.085855 -0.085855 0.354790 0.354790 0.000000 0.000000 1.206100 0.134500 -0.162940 -0.666790 0.298350 -0.137810 -0.158810 -0.567440 -0.574760 -0.549950 -0.549950 0.432940 0.432940 -0.562660 -0.581650 -0.581650 0.416800 1.296000 -0.081339 -0.090493 0.092460 -0.163 -0.163 0.289 0.289 -0.138 -0.138 1.674 -0.575 -0.550 0.433 0.433 -0.563 0.446 -0.575 -0.575 0.417 0.417 0.000 0.000 2.236 2.236 0.000 0.000 0.328 0.328 0.000 0.443 0.000 0.000 0.355 0.355 0.000 0.000 1.206 1.206 0.135 0.135 -0.532 -0.532 0.000 -0.163 -0.163 0.289 0.289 -0.138 -0.138 1.674 -0.575 -0.550 0.433 0.433 -0.563 0.446 -0.575 -0.575 0.417 0.417 0.000 0.000 2.236 2.236 0.000 0.000 0.328 0.328 0.000 0.443 0.000 0.000 0.355 0.355 0.000 0.000 1.206 1.206 0.135 0.135 -0.532 -0.532 0.000 6.887558 5.652455 4.224596 15.059534 9.365606 4.832277 7.620179 2.832282 10.681290 9.149689 5.518777 1.417218 8.758572 11.082278 12.805435 10.319614 11.587372 10.045380 9.692587 7.724059 4.587161 12.532716 -1.167799 2.154194 7.620179 7.320116 9.9769342 11.3782058 12.8376374 10.0670935 6.7087928 10.7751570 6.7451647 3.7864709 12.5979765 13.3635965 9.8259220 12.6925870 6.3714351 13.2451766 5.9820238 9.6404358 0.8322824 14.5843691 6.6714802 11.2759966 10.2669042 10.3346106 10.1547675 7.6871447 12.0053284 8.1014027 8.8081240 7.1721264 11.1620724 -0.1677986 3.0801972 9.8336842 9.8780356 12.2864467 13.8096454 10.7740572 8.7570886 9.0943709 12.1756005 12.4685607 7.1942201 10.0694859 10.9908857 8.5240194 11.0547691 10.8336841 2.4172449 9.6824629 12.2603744 11.3733726 9.2710678 9.0183902 9.3973781 15.0595337 8.5292435 8.4284657 9.2363532 8.2814247 9.1049059 10.6492596 10.6631872 7.7013453 14.5969662 9.0978910 9.7725896 10.0748547 9.6706920 7.2998811 3.5327159 11.1969579 11.4579848 11.1220067 10.0146704 9.8956710 7.8314865 9.9064174 11.5064683 9.5971475 11.9736056 NA 9.1898280 8.9315711 9.8131296 8.0121848 12.9631683 9.6404358 8.3120561 8.6299376 8.7733235 9.3440287 9.6045905 8.2876034 5.8435040 9.0514444 NA NA 7.0849412 2.2917214 9.2040527 4.9615585 11.3380875 8.7806431 9.7496481 9.4011822 0.4172719 10.8449005 13.8289260 9.6299376 11.1144957 10.3587752 10.1205653 9.0121851 6.4321894 11.1715693 9.4334897 2.6396258 3.2245960 12.6819743 9.7703852 10.3959490 7.2752194 6.4321894 13.1282601 10.8237978 11.2710679 10.7868358 10.0079377 11.9007184 10.1502538 8.8081240 10.5253273 11.2700281 9.3321218 -0.1677986 NA 8.2372473 4.6136377 13.4199363 10.0294926 8.8237978 NA 7.7853668 10.0694859 1.8322824 8.8023819 7.7951721 11.6406369 4.1176784 5.5327159 TCGA-EI-6881 60 0 NA 499 rectum stage iiia t3 n1 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 1 white not hispanic or latino 158.34.0 NA NA 2 2 2 5 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0941083 11.4069800 12.4427812 8.5302073 9.1867662 10.2073615 2.5395311 0.4520682 11.4405639 2.1525079 8.2896846 10.5992616 10.4286208 9.5149192 10.5602544 8.3901659 0.0312080 0.0312080 -0.1205100 0.0216560 0.0092232 0.0092232 0.0044937 -0.2415100 -0.2888800 -0.2888800 -0.2800800 -0.2800800 1.3865000 1.3865000 1.3259000 -0.5959100 0.0561390 -0.2400700 -0.2400700 -0.0116970 0.6690700 0.6690700 0.6690700 -0.0716890 0.0854200 0.0188560 0.0312080 0.0000000 0.0413210 0.0213760 -0.3042300 -0.3042300 -0.3285200 -0.1205100 -0.1205100 0.0216560 0.0160590 0.0175970 -0.0330810 -0.2415100 -0.2415100 -0.2888800 -0.2800800 -0.2800800 -0.6145700 -0.6145700 -0.5959100 -0.5959100 0.0561390 0.0561390 -0.2400700 -0.6224200 -0.6224200 -0.0116970 -0.5997000 -0.1071800 -0.6077000 -0.0716890 -0.242 -0.242 -0.289 -0.289 -0.280 -0.280 1.326 -0.615 -0.596 0.000 0.000 -0.240 -0.240 -0.609 -0.609 0.000 0.000 0.000 0.000 0.069 0.669 -0.107 -0.578 0.000 0.000 0.000 0.000 -0.304 -0.304 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 -0.242 -0.289 -0.289 -0.280 -0.280 1.326 -0.615 -0.596 0.000 0.000 -0.240 -0.240 -0.609 -0.609 0.000 0.000 0.000 0.000 0.069 0.669 -0.107 -0.578 0.000 0.000 0.000 0.000 -0.304 -0.304 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 5.3827952 5.3945724 1.6219932 15.4036132 10.1761441 1.7739963 10.3483891 3.6999846 10.2489075 8.6928481 6.5073396 3.6615102 9.4841025 10.7980163 12.4402976 10.7032432 10.7905145 9.5302075 8.4293364 0.7739963 2.7739752 11.8356260 3.2069401 8.1833758 7.8614474 8.6106665 9.8335996 10.9298150 11.9095658 9.6898642 8.2786051 10.0745662 7.1031084 4.5181448 12.6209638 13.2105402 9.1901489 13.0273596 6.6856767 12.4427812 3.8783232 7.5421690 2.4520682 14.4461449 5.6018035 11.2823738 9.6940399 10.2734321 10.2073615 6.5288729 12.8636339 8.8582617 8.9628208 11.5215065 10.9929112 -0.5479318 NA 9.9196623 10.3327881 11.5806955 12.7391919 11.4024303 7.7305061 9.4414511 12.2940141 13.7038719 7.3738979 10.2569943 11.0494109 7.5288721 11.33412649 11.11672616 -1.54793177 9.09410831 11.81605453 11.40697999 8.94290767 8.51275271 8.79524225 15.40361325 8.55403239 8.41495282 10.58455640 8.95886007 8.95687560 10.64773651 10.92626960 9.69081969 14.19822982 9.48134395 9.72759921 9.72876269 9.85293612 8.05568319 6.48547996 11.32415438 10.82247165 10.57811583 10.18803577 9.85560139 7.50054395 9.56514760 11.11561476 10.06538571 12.42807566 NA 9.26423404 8.83885693 10.28810705 7.92576271 13.29984812 7.54216904 4.69998464 7.66394514 6.90738343 9.69523073 9.63631212 7.90165917 7.31624261 9.18422400 NA NA 7.57359039 1.45206823 9.19520806 5.17997675 11.51292145 9.46956103 9.51072501 9.52150642 1.62199323 10.80603053 13.63126603 9.63631212 11.44056389 11.05545124 10.02286116 8.86779857 5.45205505 11.47858015 10.93190012 NA 7.17657012 12.84946394 10.83278829 10.28613263 7.93399745 7.05568265 13.47762885 11.28968464 10.76550665 10.91736798 9.51491915 12.31972154 10.58262722 8.47442469 11.28078822 11.71135862 10.56025439 1.03703073 -1.54793177 8.09956926 3.25940809 14.05840406 10.08050218 8.41205873 0.03703073 8.97323500 10.25699435 -0.54793177 8.76720620 7.69760912 12.22632901 4.25940809 7.62198151 TCGA-EI-6882 59 0 NA 262 rectum stage iia t3 n0 m0 25-9-2014 male 2011 NA NA rectal mucinous adenocarcinoma yes r0 0 white not hispanic or latino 158.34.0 NA NA 1 3 3 5 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.829188 11.293146 11.742773 8.112333 10.096598 11.211322 1.193456 NA 10.647255 NA 8.531092 10.237181 11.293475 10.317908 10.588468 11.265937 0.61136000 0.60999000 -0.00290910 0.00000000 -0.00263220 -0.00263220 -0.01880400 0.00685580 0.00194180 0.00194180 0.00360760 0.00360760 -0.00595220 -0.00595220 -0.00595220 0.01293400 0.00499690 0.00291330 0.00291330 -0.02219500 0.01740400 0.01740400 -0.01394200 0.05281000 0.00499690 0.00499690 0.01597000 -0.00470790 -0.00309290 -0.62808000 -0.00290910 -0.01250300 0.00000000 -0.00290910 -0.00290910 0.00000000 0.00000000 -0.00138580 -0.00263220 0.00685580 0.01377200 0.00194180 0.00360760 0.00360760 0.00277450 0.00277450 -0.67994000 0.01293400 -0.73582000 -0.01670400 0.00291330 -0.00193990 -0.00193990 -0.02219500 0.01740400 -0.00788630 -0.00041585 0.05281000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 6.669203 5.237862 2.893906 14.765014 9.670216 4.948358 8.388227 11.746859 10.708184 8.611322 6.955021 3.893906 8.681310 11.017633 13.714641 9.468430 10.907286 10.189237 8.566335 NA 3.100355 10.806799 3.441404 8.851681 7.032674 7.855248 10.6798019 10.1175399 10.9980041 9.7052223 8.4579123 10.7204580 8.3278962 4.9748275 12.0620994 13.4219878 9.8738292 13.1711074 8.1821545 11.7427731 5.5857858 7.7671171 0.1934564 12.4436201 5.4602577 12.1617765 10.2862269 10.5001010 11.2113221 7.0200187 14.0117523 9.6102673 9.2822579 13.2410197 11.1906492 2.0008293 NA 11.1223582 9.5488208 12.6000733 11.7626133 11.3016674 9.7727857 8.6197343 11.7042339 13.8941803 7.1301072 10.4672653 10.7666435 6.5153971 11.9848361 10.2460377 0.1934564 9.8291879 11.8203195 11.2931463 9.6823140 9.4788719 8.9731891 14.7650144 6.3227520 7.4926776 10.0981043 10.8003375 9.0699867 10.6853228 10.4053580 9.5574402 14.3109911 8.8191786 9.8264649 9.3683954 9.6610753 7.8228264 7.2915013 10.9201137 10.5165244 9.1849916 10.1990943 9.7355342 7.2590201 9.4210857 11.7340821 10.4926777 12.4842230 NA 8.7765525 8.3683956 10.5377657 10.4567389 13.5839746 7.7671171 9.7470990 7.3432168 7.2862269 9.4102156 10.7224121 8.9599987 7.9450136 9.4366437 1.5154097 -0.8064175 7.7170313 -0.8064175 9.7277726 5.2378620 10.5260658 9.8755864 9.9068562 10.7557121 0.7784609 10.3974294 13.0298160 9.7680632 10.6472548 10.6772854 9.6762776 9.7642742 1.5154097 11.3715120 11.1729164 NA 8.2487521 12.3327013 10.6421022 10.8386778 7.9281796 6.8081791 11.9959861 10.5277430 11.0420926 10.4782938 10.3179077 11.9042762 9.8273732 8.8210035 11.0829737 10.9817802 10.5884682 NA 0.1934564 6.7437546 3.6528995 13.7438558 10.3272541 9.9886976 2.0008293 8.7115524 10.4672653 -0.8064175 8.7287450 5.5510207 12.4192797 4.1934721 7.8191783 TCGA-EI-6883 63 0 NA 350 rectum stage iic t3 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 158.34.0 NA NA 4 3 NA NA 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4178086 11.1104487 12.4009621 7.9594300 9.4909243 9.4270488 6.1026056 -0.3237326 9.5513230 1.4836739 7.6706952 10.6539794 9.5436204 9.3273934 9.7343335 11.2309306 0.00000000 0.00000000 0.35209000 0.03622900 1.19870000 1.19870000 1.18080000 -0.03044600 -0.01037000 -0.01037000 0.03665300 0.00847430 0.57416000 0.57416000 0.53135000 -0.68640000 0.00485790 0.03788900 0.03788900 0.61100000 1.66400000 1.66400000 1.73320000 0.01237600 0.02412700 0.02412700 -0.66550000 -0.00899060 -0.00097017 -0.02541700 -0.01871800 -0.02883400 -0.02883400 0.36461000 0.36461000 -0.71105000 0.00777830 0.60292000 -0.76252000 -0.03044600 -0.03044600 -0.01037000 0.00847430 -0.70722000 0.01866300 -0.72279000 -0.67912000 -0.68640000 -0.04644800 -0.69142000 -0.65826000 -0.68356000 -0.68356000 0.61100000 -0.70792000 0.01642500 0.04372300 0.01237600 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 -0.679 0.000 0.000 -0.658 -0.658 -0.671 -0.671 -0.032 -0.643 0.000 0.000 0.619 1.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.365 0.365 -0.705 -0.705 0.615 0.615 1.133 1.133 0.618 0.618 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 -0.679 0.000 0.000 -0.658 -0.658 -0.671 -0.671 -0.032 -0.643 0.000 0.000 0.619 1.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.365 0.365 -0.705 -0.705 0.615 0.615 1.133 1.133 0.618 0.618 0.000 6.957112 6.223235 2.135765 14.868362 9.518692 5.230929 8.368085 10.164684 10.149033 11.118248 6.143946 4.291051 10.656838 10.372440 12.296332 9.685470 11.123425 9.694542 8.392304 7.805625 4.199900 10.624344 3.068654 6.261305 7.188094 7.552859 9.5131810 11.4135891 12.4417314 9.7241473 6.3905869 10.1109700 6.3056988 5.8158930 12.4087211 12.9841829 8.5635624 12.5126880 6.0426640 12.4009621 5.7097648 8.2290110 -0.3237326 14.5679593 5.5218328 11.8336887 10.1010330 9.9513022 9.4270488 7.1920412 11.9026034 8.5218316 7.7424307 10.7104529 10.4985142 2.1357647 1.6763577 9.6521896 10.4249539 11.5922211 13.2456633 10.4152784 7.4740036 9.5794704 11.7066640 12.6769580 7.4378927 10.7410844 10.6819663 7.6129798 11.7720684 10.4169657 0.6763577 8.4178086 11.2294910 11.1104487 9.0061381 8.6521896 8.7042478 14.8683624 8.7611499 8.8222738 8.7329794 8.4245346 8.4965207 11.3741781 9.6882678 8.2701061 14.5187657 9.0117321 9.0217470 9.1015576 10.7681076 8.5280907 6.9478052 11.9199620 11.4264205 11.4634280 9.5265286 9.4535970 8.8064617 9.5779629 10.8123716 9.6018961 12.8642489 NA 9.8778531 8.2892102 10.1566271 8.6056003 12.5232032 8.2290110 8.1439474 8.8146135 7.1439474 9.9897917 10.1010330 9.1153519 7.1316687 9.1601576 4.3487636 -0.3237326 9.0973545 0.2613503 9.7042478 5.3056970 12.4910243 8.7861722 10.7004425 9.5817288 2.2612901 11.3564814 14.3803804 10.0862630 9.5513230 10.2169541 9.2547145 7.9123559 3.1999079 10.1151335 10.7738241 NA 5.9801236 12.2118601 8.7743740 10.2072357 7.5155453 4.9242709 13.7756073 10.9298938 11.1599056 11.3401222 9.3273934 12.4743072 11.4887196 8.8636938 9.5688845 12.0157742 9.7343335 2.4836997 0.2613503 7.3659558 5.6070787 13.2771258 8.6507563 9.2808949 0.9982677 8.4433178 10.7410844 3.1999079 7.1480169 6.3837008 11.5688845 4.1999000 5.5218328 TCGA-EI-6884 71 0 NA 328 rectum stage iiia t3 n1 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 158.34.0 NA NA 1 2 3 6 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2016689 11.1579855 12.7181593 8.1994746 9.5565446 10.4195125 2.0096338 -0.1602016 10.7011999 4.2991567 8.7748902 10.5522522 9.9071596 9.5578213 9.9502084 10.2976190 0.1115100 0.1115100 -0.0084385 -0.0153030 0.2149900 0.2149900 0.1322200 0.0065262 0.0000000 0.0000000 0.0227250 -0.0013038 1.1484000 1.1484000 1.0041000 -0.3272800 0.0230000 0.0375000 0.0375000 0.0353830 0.3807200 0.3626100 0.3626100 0.0486880 0.1115100 0.1115100 0.1115100 -0.0066432 -0.0097303 0.0210430 -0.0158790 -0.0158790 -0.0304470 -0.0088526 -0.0084385 0.0026357 -0.0153030 0.0995790 -0.3495000 0.0065262 0.0065262 0.0000000 0.0227250 -0.0013038 -0.3361800 -0.3468500 -0.3272800 -0.3272800 0.0399020 0.0230000 -0.3186700 -0.3436500 -0.3606500 0.0353830 -0.3313300 0.0111210 0.0348180 0.0486880 0.000 0.000 0.000 0.000 0.000 0.000 1.004 -0.347 -0.327 0.000 0.000 -0.319 0.000 -0.344 -0.344 0.000 0.000 0.112 0.112 0.031 0.363 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 -0.217 0.132 0.309 0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.004 -0.347 -0.327 0.000 0.000 -0.319 0.000 -0.344 -0.344 0.000 0.000 0.112 0.112 0.031 0.363 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 -0.217 0.132 0.309 0.309 0.000 7.4209261 5.8284107 3.5946083 15.4209546 9.7511172 4.1616539 10.0965236 0.4247071 11.2483203 9.7997272 7.3435508 4.6726177 9.3325797 10.5310325 11.8853142 10.4307799 11.4704473 9.6812895 8.8312471 7.2363300 5.8170041 11.6553086 2.2991567 7.1343462 8.3195055 8.2427373 10.030784 10.781506 11.665280 9.509496 7.584559 10.407206 6.817005 5.999596 12.865470 13.261856 9.167278 13.200572 6.937758 12.718159 6.097114 9.447980 2.647084 13.667762 4.621085 11.398146 9.775627 10.449827 10.419512 8.349500 12.903542 8.645469 8.571044 12.933720 11.249646 2.839718 2.839718 10.328569 10.363777 12.312797 12.629463 10.785900 8.599613 8.764538 11.456504 13.482961 7.152608 10.712785 10.786997 7.567646 11.3388236 11.0124652 1.4247071 9.2016689 11.7330267 11.1579855 8.8198649 9.1851304 9.4095808 15.4209546 7.4209261 7.7496181 9.4943612 9.2501764 8.8662487 10.4387082 11.0137145 8.8062596 14.2893575 8.2298941 9.6478849 9.7585883 8.8523497 6.8227187 8.1548748 11.2746140 10.6891303 9.9212085 10.3275652 9.9338029 8.0755481 9.4862840 10.9799159 9.5870790 12.4932465 NA 9.2691318 8.1906642 10.0146508 9.4256265 12.5590070 9.4479800 8.6741962 7.8895739 9.5462212 10.0436849 9.8956854 7.7880925 6.0491777 9.2847399 NA -1.1603628 8.0442963 0.8397178 9.7116303 5.8397253 11.2795560 8.9638466 9.5937775 9.6686549 -1.1603628 10.4340498 13.8955583 10.0510051 10.7011999 10.8123460 9.8758988 9.0455183 4.3315762 10.5824556 11.5637977 2.2991567 7.9995964 12.6435536 9.4162096 10.1700819 7.3032492 6.5879185 12.8214708 10.7177761 11.1765107 10.4373122 9.5578213 11.8409574 10.5790839 8.9625531 9.8950076 11.1392194 9.9502084 -1.1603628 NA 8.1094363 5.5811915 13.4317734 9.8220058 9.2298941 2.6470842 8.8213068 10.7127847 3.5401637 7.9508609 6.8786444 11.7451122 4.7466137 6.5121510 TCGA-EI-6885 57 0 NA 415 rectum stage iv t3 n1b m1 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 2 white not hispanic or latino 158.34.0 NA NA 1 1 3 3 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2074517 11.6764281 11.9292237 8.2716484 9.5794900 9.5622831 0.3233124 0.6452405 10.1390647 4.4525625 7.9544581 10.6259202 9.7273584 9.7869947 9.3317099 8.9608117 0.3356100 0.3356100 -0.0452280 -0.0243880 -0.4053900 2.1339000 3.1106000 -0.0656590 -0.0463120 0.3013000 0.3264000 0.3264000 0.0095883 0.0095883 0.0120970 -0.3759500 -0.0078863 0.0000000 0.0000000 -0.3605600 1.6894000 1.6894000 1.6808000 0.1336200 -0.0139530 -0.3923000 -0.3923000 0.2692300 0.0502500 0.2172900 -0.0129890 -0.0129890 -0.0129890 -0.4082700 -0.0452280 -0.0243880 -0.0243880 -0.0160170 -0.4204600 -0.0656590 -0.0656590 0.3013000 0.3264000 0.3134300 0.3332400 0.3354500 -0.3759500 -0.3759500 -0.0078863 -0.0078863 0.0000000 -0.3820100 -0.3834700 -0.3605600 1.6894000 0.3523500 -0.0271240 0.1336200 0.000 0.000 0.301 0.301 0.326 0.326 0.000 0.335 -0.376 0.000 0.000 0.000 0.000 -0.382 -0.382 0.585 0.585 0.000 0.336 1.689 1.689 0.309 0.000 0.269 0.269 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.985 0.000 0.000 1.921 0.000 0.000 0.134 0.000 0.000 0.301 0.301 0.326 0.326 0.000 0.335 -0.376 0.000 0.000 0.000 0.000 -0.382 -0.382 0.585 0.585 0.000 0.336 1.689 1.689 0.309 0.000 0.269 0.269 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.985 0.000 0.000 1.921 0.000 0.000 0.134 7.594744 6.561687 3.645206 14.093454 9.740606 5.757909 9.967588 1.782702 9.945791 8.709144 7.988617 5.367675 9.313385 11.111592 12.407010 9.160909 11.117900 10.329607 9.647462 9.601731 5.143459 10.485673 2.908236 6.294825 6.389371 8.911996 10.028914 11.981493 12.073779 10.273473 7.289065 10.769589 6.457708 5.051202 11.022637 13.007427 9.192875 13.387814 7.331710 11.929224 6.985060 10.498207 3.680831 14.965361 6.394744 11.570912 10.653638 10.983723 9.562283 8.594744 13.352612 9.255496 9.273108 9.744820 11.341481 3.078166 4.571210 10.687690 10.317635 11.760643 13.170779 10.845372 7.124181 9.676979 12.448291 12.798381 7.672009 9.675325 11.122968 8.230172 11.79850805 11.27037020 0.32331242 8.20745170 11.62263240 11.67642808 9.46091290 9.08316948 9.87691056 14.09345396 8.87402815 8.34148146 9.66868647 9.46921342 8.94441749 10.37381012 11.10176910 8.79596204 13.92699452 8.68741593 9.74797240 9.79546436 10.05035082 7.44481447 5.77449190 11.87342681 11.15161614 11.07754244 10.98594964 10.77242989 9.05174594 9.86872843 11.41372455 10.06727408 11.45069531 NA 9.13385298 9.81061887 9.65811310 7.85271177 13.15463798 10.49820698 8.04949954 8.90730411 8.75582328 9.17190409 10.50753679 9.22929254 8.05704243 10.96555863 7.27747711 7.14982941 9.12498951 0.64524051 9.85368757 5.68083349 10.47366324 9.08150448 10.55720051 9.78271292 -0.09172508 10.07649804 14.14719577 10.17307733 10.13906474 10.31515738 10.53911760 9.17268627 4.02371666 11.05247710 9.98478329 -1.67668758 5.98149193 13.10566525 9.29984541 10.00759162 7.65439974 6.54728324 13.01937943 10.69124198 10.96848933 10.38633923 9.78699471 11.74836600 9.68028339 8.99570667 10.31904840 10.54002708 9.33170992 1.13066734 4.25496434 8.28418096 6.08483177 13.41322822 9.56883397 9.94624821 -0.67668758 8.36900008 9.67532461 10.13866462 8.96262190 7.31196624 12.21847784 6.54728324 9.31692726 TCGA-EI-6917 33 0 NA 531 rectum stage iiia t3 n1 m0 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 158.34.0 NA NA 1 2 2 2 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.318410 11.530424 12.090504 8.115082 9.848730 9.757378 0.168642 -1.416192 10.520339 2.043134 8.579468 10.900265 10.664518 10.468993 9.623305 10.671495 0.00361060 0.00000000 0.00138680 0.00305220 -0.00773030 -0.00456950 -0.00456950 -0.00387790 -0.00622860 -0.00622860 0.00444110 0.00444110 -0.00083160 -0.00083160 -0.00083160 0.00166420 -0.01725600 -0.00234190 -0.00234190 -0.02698800 -0.01200200 -0.01200200 -0.01200200 0.02308000 -0.00484610 -0.00484610 0.00361060 0.00889200 0.00694350 0.00694350 -0.01271300 -0.01271300 -0.01519100 0.00138680 0.00138680 0.00305220 0.00305220 0.00097064 -0.00773030 -0.00387790 -0.00152430 -0.00622860 0.00444110 0.00444110 0.00485790 -0.00013862 -0.01477800 0.00166420 -0.00796840 -0.04800400 -0.00234190 -0.00387790 -0.00387790 -0.02698800 -0.01200200 -0.00180140 -0.03069000 0.02308000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.391860 7.563840 5.297947 14.487605 9.410249 6.537897 10.185936 6.633549 9.853412 11.193803 7.438569 4.976020 9.205752 10.883195 11.677283 9.495842 10.785824 9.781532 7.910130 10.361367 5.831629 11.629290 3.869102 5.351886 5.227556 8.443235 9.916856 10.666848 11.286739 8.882909 9.165843 10.832221 8.069530 5.802870 11.788883 13.427327 9.822702 13.271404 7.400684 12.090504 9.744202 10.289333 2.583712 13.866101 3.831624 11.832962 11.400884 10.450593 9.757378 9.452523 12.881620 9.296228 8.830441 12.225752 11.432324 2.490596 3.753626 10.563840 10.440126 11.849462 11.684199 10.521074 7.532068 8.753626 11.444788 13.250313 7.673813 9.978163 9.701993 7.730906 11.3837917 10.9749443 -1.4161921 9.3184104 11.0984148 11.5304242 8.7735253 9.1808222 9.7013437 14.4876051 8.4754846 7.7660949 9.6544925 10.1979504 8.8574962 10.9717180 10.8999822 10.4071197 14.5691869 8.4494339 9.1131314 9.6830485 10.7155577 7.6226200 6.1535561 11.9880440 10.9033728 10.5349854 10.2396786 10.1291479 9.0694898 10.0405684 11.2300344 10.6372873 12.3893206 NA 9.0204122 9.2094095 9.9511155 8.0574064 13.2554076 10.2893331 7.3352447 9.8679465 9.7479791 8.9532981 10.3090669 10.9557495 7.5837003 9.1535563 -1.4161921 -1.4161921 8.6143679 0.1686420 10.3090669 6.0594332 11.2052948 9.0924858 10.5221776 9.6598482 1.3910528 10.6046806 14.1209191 10.9486561 10.5203387 10.1742877 10.1416430 9.4362301 3.8316239 11.6797569 9.9537723 NA 6.2561256 12.7508052 10.6941840 10.1564009 8.7186147 6.6497893 13.7696988 11.1564009 11.3898475 10.5148075 10.4689929 12.0966880 10.3364994 9.2103224 11.3888400 11.7868957 9.6233052 4.7334465 1.3910528 7.8275409 3.6711688 13.9354336 10.1859357 9.7648530 0.5837116 8.8522427 9.9781634 0.9056590 8.9920305 7.1761582 12.2135126 5.6497908 7.0431323 TCGA-EI-7002 58 0 NA 364 rectum stage iv t3 n2 m1 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 7 white not hispanic or latino 158.34.0 NA NA 2 1 NA NA 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8881983 10.9148042 12.7235459 7.3716861 9.8848024 10.2647082 4.0943459 0.5707544 10.4341978 4.2712240 7.7256042 10.6981353 10.1458522 10.1392170 9.5544920 10.8796936 0.4651900 0.4651900 0.5023800 0.0000000 -0.7790500 -0.7790500 0.0296770 -0.5089800 -0.0406160 -0.0406160 0.3112200 0.3112200 0.9573400 0.9573400 0.4961200 -0.3251900 0.0152220 0.4524100 0.4524100 0.4146300 1.3573000 1.3452000 1.3943000 1.0510000 -0.5243000 -0.5243000 -0.5243000 -0.0183530 0.0178240 -0.5144500 -0.2437500 -0.2892400 -0.8198300 -1.0721000 0.5023800 0.0000000 0.0365120 0.5210900 -1.1206000 0.0091705 -0.5089800 -0.0406160 0.3112200 0.3112200 -0.5493800 -0.5302200 -0.3251900 -0.3251900 0.0152220 -0.5105300 -0.5553700 -0.5175300 -0.5175300 0.4146300 0.5206600 -0.5324600 -1.1314000 -0.2370400 0.000 -0.509 0.000 0.000 0.311 0.311 0.945 -0.534 -0.325 0.000 0.000 -0.555 0.452 -0.518 -0.518 -0.159 -0.159 -0.524 -0.059 1.394 1.394 -0.532 0.000 0.000 0.000 0.513 0.513 -1.293 -1.293 0.000 0.477 0.000 0.000 0.521 0.521 -0.779 0.000 0.000 0.000 -0.273 0.000 -0.509 0.000 0.000 0.311 0.311 0.945 -0.534 -0.325 0.000 0.000 -0.555 0.452 -0.518 -0.518 -0.159 -0.159 -0.524 -0.059 1.394 1.394 -0.532 0.000 0.000 0.000 0.513 0.513 -1.293 -1.293 0.000 0.477 0.000 0.000 0.521 0.521 -0.779 0.000 0.000 0.000 -0.273 6.785105 5.501522 4.094346 14.717095 9.333998 6.984414 8.183654 5.668817 9.567965 8.909522 6.536570 2.658257 9.836987 10.841373 12.258817 9.842249 11.133744 10.340624 9.285031 9.070632 5.559470 12.199573 -1.429343 5.214642 5.658249 8.032265 10.186415 11.307822 12.260129 10.150573 7.459529 10.866842 7.777800 4.658246 12.641242 13.223575 9.749451 13.281592 7.811458 12.723546 6.250266 9.377335 1.892702 14.550412 4.799605 11.740867 10.516230 10.737890 10.264708 8.221837 12.318140 9.327342 9.545917 5.997051 10.983091 2.030230 2.477677 10.090913 10.408414 12.183654 13.988078 10.775663 9.467913 8.968460 11.748982 13.026049 7.278145 9.383765 11.181349 8.981237 11.3674338 11.3652016 -0.4291485 8.8881983 11.4803039 10.9148042 9.4625695 9.2867479 9.2254217 14.7170953 8.2729586 7.4806787 9.5608897 8.7778001 8.6635428 11.0626389 11.2343439 8.8802735 13.8857584 8.3038013 9.8193064 10.2647082 10.0455058 7.2289976 5.1406396 12.1443146 11.4090049 10.2254218 10.5584051 9.5509253 9.1533230 9.7893489 10.9436508 9.5423293 12.4975450 NA 9.4233153 9.0001924 10.0601320 7.0261128 13.0990567 9.3773355 5.2850322 8.7814571 8.7039281 10.0064560 9.7500728 8.5644742 8.2677535 8.5552042 7.4686314 2.9631042 7.3054954 -0.4291485 10.1725565 5.2146416 11.9152204 8.5693760 9.8665547 9.6482691 1.1557492 10.9815021 14.7154241 9.7881377 10.4341978 10.1411159 10.3151992 9.0074974 5.9716654 10.0621379 9.8876613 0.5707544 4.5480667 11.8198992 9.3156197 9.6294541 7.2952997 6.4473031 13.1098840 10.1932952 10.8506865 10.8794092 10.1392170 12.3831637 10.4952272 8.2660139 10.3933566 11.5560941 9.5544920 0.1557492 0.1557492 8.6131975 5.8927140 13.9349888 9.6819215 8.9447384 -0.4291485 8.2564281 9.3837652 9.3676367 8.1799643 6.4411498 11.7902568 4.4287655 5.9801761 TCGA-EI-7004 37 0 NA 257 rectum stage iva t4a n2b m0 25-9-2014 female 2011 NA NA rectal mucinous adenocarcinoma yes r0 30 white not hispanic or latino 158.34.0 NA NA 1 3 NA NA 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5946236 11.1649722 11.7104114 7.9917798 7.7665216 10.4702671 -0.2078943 1.1140338 10.6465860 3.5469932 8.8158617 10.6978702 10.4196411 10.3319785 9.5123513 10.6720732 0.0000000 0.4282200 0.0012481 -0.0110600 0.0072835 0.0072835 0.0075000 0.0040243 -0.4632300 0.0054139 0.0055529 0.0055529 0.4432500 1.2007000 -0.4207900 0.8050000 -0.0109220 -0.0049844 -0.0049844 -0.0304160 0.0174040 0.0174040 0.0174040 -0.0368100 -0.4782800 0.4129500 0.0000000 0.0174040 0.0070826 -0.0128510 0.0022193 -0.4413500 -0.0073339 -0.4523300 0.4019400 0.4454500 -0.0044248 0.8386400 -0.4564000 0.0040243 0.0728270 -0.4552600 0.0055529 0.2519900 0.0013868 0.0013868 0.3701900 0.3701900 -0.0109220 -0.4624900 -0.4615300 -0.4312700 -0.4312700 -0.0169790 -0.2323900 -0.4507200 -0.0094046 -0.0368100 -0.455 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.370 0.000 0.000 -0.457 0.000 0.000 -0.387 0.000 0.000 0.387 0.387 0.000 0.000 -0.451 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.443 0.000 -0.446 0.000 0.513 0.000 0.000 -0.455 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.370 0.000 0.000 -0.457 0.000 0.000 -0.387 0.000 0.000 0.387 0.387 0.000 0.000 -0.451 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.443 0.000 -0.446 0.000 0.513 0.000 0.000 8.4012857 7.4786079 8.0064265 14.5156604 9.1919191 5.3770682 9.2708767 1.1140338 10.8571867 9.9006317 7.3234890 3.7463020 10.1066904 11.1469075 10.7531950 8.9843999 10.8144750 10.1967166 8.8144751 12.2054706 7.2959333 12.5170473 0.7921057 6.6989977 6.8528029 7.1714851 10.750660 10.503344 10.800536 9.349571 8.640730 10.685788 7.485594 6.656293 11.843996 13.466244 10.829654 13.114387 7.243319 11.710411 7.662472 11.452994 2.879569 13.886927 4.650087 11.763651 11.278439 10.636421 10.470267 10.169318 12.924125 8.679328 9.129729 11.645027 12.123304 3.546993 4.283959 10.568129 10.243318 12.571211 9.800536 10.245892 9.728745 8.255631 11.137790 12.972716 7.460992 10.126380 10.549497 7.794922 12.1842904 10.9003049 1.9620307 9.5946236 11.7675969 11.1649722 9.1865699 8.9469253 9.3341716 14.5156604 5.6747516 6.5800098 10.6138812 8.3714230 9.0993078 10.9745015 11.2779365 9.7109779 14.4599117 7.8795698 9.7057445 8.8075220 9.3657544 5.9917803 6.8528029 11.3975867 10.2225597 8.3312659 11.1024359 10.2267354 7.5852878 8.8296542 10.8868447 10.1908509 12.1206278 NA 9.5386214 8.8742563 10.4790453 8.9570141 13.2568443 11.4529944 10.1380667 10.6114880 11.2306391 9.9335757 10.4658579 8.6010714 5.8393399 9.6360282 0.3770682 -1.2078943 8.6609297 2.8795685 9.3156690 7.1627941 11.3598256 8.6297351 10.0494950 9.8795699 0.7921057 10.7265352 13.9620322 10.8334240 10.6465860 10.5499138 10.2668271 9.0100648 4.5200262 10.6831313 10.0502550 3.5994606 6.6747502 12.6846500 9.5106400 10.8426360 7.1627941 6.5668943 12.7248755 9.7751008 10.1562418 11.3031185 10.3319785 12.0150529 9.9595253 9.6002670 11.6510595 11.5405097 9.5123513 4.4359619 0.3770682 8.1655598 0.3770682 14.4692762 9.6493106 9.9738806 -1.2078943 8.5941712 10.1263804 -1.2078943 8.6360282 7.2515392 11.6686241 5.5865216 7.7198850 TCGA-F5-6464 77 1 303 0 rectum stage iiic t4b n2a m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 4 white not hispanic or latino 122.34.0 NA NA 1 2 1 2 1 1 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.264722 11.263389 11.839526 7.762577 9.272161 10.381837 -1.138283 NA 10.652466 4.071162 8.665841 10.595572 10.643479 10.505647 10.077849 10.265254 1.4632000 0.5745500 -0.3053400 -0.0542860 -0.0821370 -0.0821370 0.8595700 -0.0472060 -0.0537460 -0.0537460 -0.0403450 -0.0403450 0.8952700 0.8952700 0.8880600 0.1547100 -0.0350700 0.0012481 -0.0123000 0.0019418 0.8471100 0.8471100 0.8471100 0.0202030 0.0000000 -0.0161540 -0.0519910 0.2655400 -0.0467180 -0.0410240 -0.0490190 -0.0490190 -0.1461800 0.1416200 -0.3053400 -0.0503700 -0.0542860 0.2172900 -0.5459300 -0.0472060 -0.0344950 -0.0537460 -0.0403450 -0.0329960 -0.0444150 -0.0444150 0.1689500 0.1689500 -0.0814720 -0.3663500 -0.5140400 -0.0583270 0.3565900 0.0019418 0.8471100 -0.0479360 0.0036076 0.0202030 0.000 0.000 0.000 0.000 0.000 0.000 0.895 0.000 0.169 0.000 0.000 -0.502 0.000 0.413 0.413 0.000 0.000 0.575 0.575 0.847 0.847 0.000 0.000 0.376 0.376 0.000 0.000 0.000 0.000 0.125 0.125 0.000 0.000 0.862 0.862 -0.464 0.386 0.378 0.378 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.895 0.000 0.169 0.000 0.000 -0.502 0.000 0.413 0.413 0.000 0.000 0.575 0.575 0.847 0.847 0.000 0.000 0.376 0.376 0.000 0.000 0.000 0.000 0.125 0.125 0.000 0.000 0.862 0.862 -0.464 0.386 0.378 0.378 0.207 8.959742 7.609903 7.046585 14.756053 9.812266 6.228032 9.906787 1.446680 10.735154 9.883384 7.569069 4.719693 9.400869 10.969254 12.060769 10.134340 10.915296 9.402806 8.707200 11.760878 6.541190 12.192907 3.815903 5.385272 1.446680 8.194865 10.524823 10.687861 12.754253 9.397957 7.565613 10.411494 5.562151 5.694599 10.020950 13.103618 10.359562 12.863646 7.206005 11.839526 8.544704 11.013995 3.616593 13.342311 6.990992 11.487647 10.842206 10.290070 10.381837 10.913598 13.801656 8.715019 8.199332 11.183920 11.988737 3.562145 3.906102 9.888233 10.442910 12.112304 10.042241 10.791338 9.778336 8.751974 11.619933 13.466842 6.707200 9.730532 10.527490 8.126153 11.7942936 10.5647482 3.3852654 9.2647217 11.8493291 11.2633893 7.8332532 8.6149266 9.1825103 14.7560529 7.9623720 8.0441039 10.3610574 10.3399738 9.1734580 10.9207162 11.5044384 8.4070217 13.9100689 8.5930288 9.8439904 9.3714848 9.0453452 6.4315661 6.7865219 10.7001258 10.0335121 9.5208137 10.6057027 9.8985703 8.1304625 9.4353569 11.1856090 10.0735980 12.3590539 NA 9.2785073 8.7118965 10.1864529 7.9728454 12.9057623 11.0139946 8.0760288 10.7954004 10.5875021 9.6132539 10.0515343 8.6479793 8.0115840 10.5266014 5.2879746 NA 8.2410879 -1.1382828 9.5793863 6.7320751 10.9514913 8.8785181 10.4727346 9.5913305 -0.1382828 10.5190282 13.2896118 11.1580524 10.6524655 10.9207162 9.6930170 8.7351539 5.2540271 10.4644086 10.6921021 3.3211344 6.7320751 12.3997774 9.4018378 10.6678566 6.8100767 6.6031768 12.5597632 10.2093311 10.4348836 11.2178866 10.5056471 11.7338074 9.9787035 9.0341373 10.6522334 10.5720857 10.0778493 2.7686078 NA 7.9564209 3.3211344 14.3826046 9.7297606 9.2732207 0.8617172 8.4729930 9.7305323 -0.1382828 7.7924474 7.3535632 11.8246058 5.2540271 7.4466723 TCGA-F5-6465 64 0 NA 1141 rectum stage iia t3 n0 m0 25-9-2014 female 2010 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 122.34.0 NA NA 1 1 2 5 1 2 3 2 2 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5077635 11.5005432 12.2746665 8.4139152 8.8524118 10.4925401 3.8982180 -0.4237197 11.4940324 2.3836352 8.9127939 9.8908706 10.2793257 9.8751232 9.8277698 8.9578305 0.01890300 0.01890300 1.54280000 0.57148000 0.55107000 0.55107000 0.55107000 -0.01505400 -0.01931400 -0.01931400 -0.01450300 -0.01450300 0.55266000 0.55266000 0.55266000 0.00083195 0.58381000 0.01530800 0.01530800 0.03820600 1.09620000 1.09620000 1.09770000 -0.18131000 0.04819500 0.01890300 0.01890300 0.49372000 -0.00235530 0.00013863 -0.01064600 -0.01064600 -0.01064600 -0.60671000 -0.01422800 0.55071000 0.53749000 -0.00124730 0.55107000 -0.01505400 -0.01505400 -0.01931400 -0.01450300 -0.01356000 -0.00567570 -0.00829680 0.00083195 0.00083195 0.58650000 0.56614000 -0.59205000 -0.34973000 -0.34973000 0.03820600 1.09620000 -0.00512270 0.00180300 -0.18131000 0.000 0.000 0.000 0.000 0.000 0.000 0.553 0.000 0.000 0.566 0.566 -0.592 0.000 -0.350 -0.350 0.000 0.000 0.000 0.000 1.110 1.110 0.000 0.000 0.494 0.494 0.000 0.000 0.000 0.000 0.000 0.000 0.537 0.537 0.000 0.000 0.551 0.551 0.000 0.000 0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.553 0.000 0.000 0.566 0.566 -0.592 0.000 -0.350 -0.350 0.000 0.000 0.000 0.000 1.110 1.110 0.000 0.000 0.494 0.494 0.000 0.000 0.000 0.000 0.000 0.000 0.537 0.537 0.000 0.000 0.551 0.551 0.000 0.000 0.343 8.025436 5.795455 4.483177 14.752499 9.583315 5.736158 10.076133 6.010916 10.139960 9.710714 8.047963 5.146142 8.542072 11.285802 12.686771 9.639008 11.289889 10.056573 9.647079 8.928331 6.123182 11.535021 2.968607 4.576286 7.697821 7.205644 10.216532 11.196507 11.565682 10.288814 7.539184 10.733318 6.726034 6.205645 12.304314 13.312055 10.047455 13.103337 6.989916 12.274666 7.468071 9.951327 4.434268 14.342557 6.452805 12.214610 10.544954 10.645737 10.492540 9.293107 13.088966 8.921692 8.882349 10.416672 11.467122 2.161243 2.276735 10.119803 10.039812 11.978767 13.188119 10.829248 6.715838 8.962150 12.055436 12.892427 7.047963 10.749965 11.166173 7.788175 11.5449542 10.7698127 1.1612428 9.5077635 11.8202051 11.5005432 9.3160679 9.3244803 9.8931345 14.7524993 8.4846799 8.2922494 9.7710442 8.7411943 8.9994034 10.9100018 11.0578346 8.8842850 14.3742022 7.8547369 9.5224627 9.3008012 9.2174360 7.5791024 8.7462123 11.1382913 11.7842168 10.7094296 10.5948353 9.9044013 7.8152891 9.2047330 11.4701577 10.5889119 12.0602039 NA 9.3386693 8.9760992 10.2888144 9.5449542 14.2817038 9.9513268 6.2344994 9.2165322 10.3510744 9.9083239 10.1923767 8.8415625 4.9596450 9.9567484 NA NA 8.8709081 0.1613073 9.3682642 5.7661128 11.0771293 8.3868592 10.1499346 9.8834882 1.8982084 10.6325864 13.8003644 9.7437055 11.4940324 10.7957584 9.9066441 9.0510074 6.2905331 11.6751419 9.0132487 1.5762803 8.6743194 12.5309381 10.0418538 10.6557722 7.8959593 7.5070247 12.8105061 10.4354339 10.6910058 10.7155190 9.8751232 11.7410372 10.4458812 9.0459292 10.6815412 11.4648404 9.8277698 3.3311749 -1.4235262 7.1690812 7.2129117 13.8935940 9.9183621 9.5776956 3.3311749 8.8232418 10.7499645 2.1612428 9.2460582 7.9294342 11.9111193 5.0192304 8.1537162 TCGA-F5-6571 62 0 NA 952 rectum stage iia t3 n0 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 139.38.0 NA NA 2 2 2 2 1 1 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.802164 11.530868 12.779856 8.156928 8.933521 10.087300 5.023073 1.268195 11.307790 3.005148 8.711129 10.643587 10.340541 9.942501 10.543922 8.818932 0.0146780 0.0146780 0.0416690 0.0945630 0.0347460 0.0347460 0.0377100 -0.0672210 0.0000000 0.0000000 -0.0455690 -0.0455690 1.9866000 3.1154000 1.8811000 -0.6890100 0.0371450 -0.0327930 -0.0327930 -0.1146300 1.7400000 1.7400000 1.8311000 -0.1313800 0.0146780 0.0146780 0.0146780 -0.2484300 0.0502210 0.0711740 -0.5356600 -0.5356600 -0.5356600 0.0416690 0.0416690 0.0945630 0.0945630 0.1100100 -0.6974400 0.1360600 -0.0672210 -0.0083709 -0.0455690 -0.0455690 -0.6565400 -0.6926400 -0.6755000 -0.6755000 0.0371450 0.0371450 -0.6933700 -0.7062600 -0.7062600 -0.1146300 -0.6987000 -0.8644800 -0.0493590 -0.1313800 0.136 0.000 0.000 0.000 0.000 0.000 1.881 -0.657 -0.675 0.000 0.000 -0.661 0.000 -0.706 -0.706 -0.115 -0.115 0.000 0.000 -0.228 1.774 -0.235 0.000 -0.248 -0.248 0.000 0.000 -0.536 -0.536 0.000 0.000 0.000 0.000 0.110 0.110 -0.697 0.000 0.000 0.000 -0.117 0.136 0.000 0.000 0.000 0.000 0.000 1.881 -0.657 -0.675 0.000 0.000 -0.661 0.000 -0.706 -0.706 -0.115 -0.115 0.000 0.000 -0.228 1.774 -0.235 0.000 -0.248 -0.248 0.000 0.000 -0.536 -0.536 0.000 0.000 0.000 0.000 0.110 0.110 -0.697 0.000 0.000 0.000 -0.117 8.140604 6.666217 3.770681 15.407617 10.176578 4.355651 8.330681 NA 10.325275 10.015819 7.599102 5.312578 8.914444 10.888100 12.985719 10.588986 11.065577 10.297473 9.106339 7.982431 6.049546 12.798429 2.590123 4.660501 6.101074 7.989284 10.199415 11.640325 12.792727 9.981858 6.619860 10.789459 5.968625 5.451406 12.239849 13.179765 9.947665 12.906244 7.444774 12.779856 5.812506 10.004587 4.411141 14.670420 5.092613 10.880747 10.657637 10.380190 10.087300 9.070163 12.592366 9.168046 9.211677 7.688848 11.360722 2.683225 2.683225 9.906621 9.916842 12.198183 13.511012 10.694101 7.512946 9.972089 12.353768 13.049203 7.493795 10.498606 11.693401 7.914444 11.1587030 11.3118962 0.2681948 9.8021640 12.4218429 11.5308675 9.4694925 9.4288972 9.6228021 15.4076165 8.3216589 8.6590708 9.3485589 8.9072245 8.9686250 11.1627505 11.3297815 7.6276419 13.8728930 9.0186133 9.9610914 9.4514071 10.1063388 6.0926134 7.3767097 10.9872889 11.2824384 10.3297815 10.2121653 10.0407749 8.4206054 9.7317097 11.6588917 9.7166458 12.0313590 NA 9.2358919 8.4694925 10.6146991 8.8828952 12.4867486 10.0045873 7.1136755 8.6518898 9.8748990 10.0319511 9.7917473 8.1589565 7.3591803 9.5161129 NA NA 8.3360678 6.9500099 9.3324790 5.5161129 11.6918266 8.6846312 9.9341134 9.9347052 -1.3168875 10.7907669 14.3039295 9.7000311 11.3077899 11.0774176 9.7398606 9.3923067 6.3125799 10.6443107 10.9525570 NA 6.8531473 12.7116470 9.5412039 10.7995668 7.5161129 6.6888475 13.2699454 10.9706467 10.8493859 11.0341621 9.9425012 12.0635486 10.3257258 9.0979081 10.5357523 11.2018760 10.5439219 2.1426422 NA 7.7795165 5.2223834 13.7258227 10.3701610 8.9500093 1.6832024 8.8440272 10.4986061 0.6832024 8.1447021 6.8730479 11.7842136 5.2681836 8.1790781 TCGA-F5-6702 71 1 869 452 rectum stage iva t3 n1 m1 25-9-2014 male 2010 NA NA rectal adenocarcinoma yes r0 1 white not hispanic or latino 139.38.0 NA NA 4 1 1 2 1 1 1 1 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.220252 11.120199 11.293303 8.142250 7.967571 9.993524 1.046351 -1.275437 10.936589 4.894323 8.927745 10.488854 10.648838 10.301358 10.388844 11.063133 -0.1292700 -0.1292700 -0.3922100 0.2117800 0.6749300 0.6749300 0.6916700 -0.1376000 0.0735460 0.0735460 -0.1327100 -0.1327100 3.6569000 3.6569000 0.5805900 -0.1382000 0.3052100 -0.2921300 0.0834870 -0.1252500 0.9457500 0.9457500 1.0572000 0.0000000 -0.1292700 -0.1292700 -0.1292700 0.0316810 0.1661000 0.1769400 -0.3642000 -0.3642000 -0.3642000 -0.3898100 -0.3922100 0.2319400 0.2023000 0.3040900 -0.6720500 -0.1376000 -0.1376000 0.0735460 -0.1327100 -0.1327100 -0.0175280 -0.0175280 -0.1382000 -0.1382000 0.3052100 0.2940800 -0.2921300 -0.3928600 -0.3928600 -0.1252500 -0.4003000 0.0026357 -0.1511500 0.0000000 -0.138 -0.138 0.000 0.000 -0.133 -0.133 0.581 0.000 -0.138 0.305 0.305 -0.292 -0.292 -0.392 -0.392 -0.125 -0.125 -0.129 -0.129 -0.400 0.545 0.000 -0.129 0.000 0.000 0.166 0.166 -0.364 -0.364 0.427 -0.385 0.212 0.212 0.304 0.304 -0.011 0.661 0.204 -0.069 0.000 -0.138 -0.138 0.000 0.000 -0.133 -0.133 0.581 0.000 -0.138 0.305 0.305 -0.292 -0.292 -0.392 -0.392 -0.125 -0.125 -0.129 -0.129 -0.400 0.545 0.000 -0.129 0.000 0.000 0.166 0.166 -0.364 -0.364 0.427 -0.385 0.212 0.212 0.304 0.304 -0.011 0.661 0.204 -0.069 0.000 8.368253 6.869055 4.531749 14.785810 9.076440 4.216253 8.861388 -1.275437 10.186388 9.602448 7.600914 4.339109 9.258700 10.682587 12.370731 9.893069 11.559855 9.682950 9.118860 11.951261 7.023605 13.188815 2.046316 6.375448 6.368253 7.050826 10.3060683 10.6723991 12.3792567 9.6312875 7.6009142 10.4506151 6.3391071 5.2635565 12.0092210 13.1718031 10.2381245 13.0482257 6.7073909 11.2933031 7.7495363 11.3589811 2.6312906 14.5738265 5.7467642 11.9371972 10.9420518 10.1611084 9.9935236 10.8804800 13.1714155 8.6639761 7.9117491 11.0800233 11.5570892 0.7243883 3.9338464 10.1374960 10.0132629 12.2544374 11.6551343 10.5321544 8.1102594 9.0350096 12.0831855 13.0300312 6.8792156 10.5986098 11.4832447 8.1295386 11.9471918 10.7776440 2.1838358 9.2202518 11.9535161 11.1201988 9.0384137 8.9935235 9.2780261 14.7858101 8.0819489 8.6161805 9.8886754 8.9055492 9.1295383 11.1351132 11.2616153 8.4349451 14.6924112 8.7985382 9.8974493 9.3763455 9.4607989 7.6039801 6.9958598 11.2089681 10.5188128 10.4830366 10.6263951 9.9344594 9.3115274 9.8237447 11.4836610 9.9160731 12.1181373 NA 9.1037754 8.6085675 10.4700712 8.7439878 12.6731292 11.3589811 9.0429398 9.9387160 9.8716019 9.3510185 10.5057567 8.5213449 7.7073902 10.6012975 -0.2756117 NA 7.8329217 1.8943327 9.8413906 5.7243965 10.9711375 9.1252763 10.4012355 9.8355325 0.3094090 10.4967115 13.4121007 9.8594649 10.9365893 10.6286552 10.1553720 9.0874366 4.7467642 10.1822908 10.6035053 1.8943327 6.7412054 12.5735088 9.2761051 10.8861587 6.8067056 5.9911839 12.4786581 10.4287329 10.8845835 11.3268638 10.3013583 11.5659612 9.7837413 8.9179222 11.0725718 10.7857681 10.3888442 2.0463164 -1.2754370 8.0131244 5.0819489 14.5617785 9.6062757 9.5196249 -0.2756117 8.9438074 10.5986098 4.7687930 7.6462376 8.7728840 11.7493634 5.1337895 8.9030618 TCGA-F5-6810 71 0 NA 12 rectum stage iia t3 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 139.38.0 NA NA 2 1 3 6 1 1 4 1 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1109139 11.4528556 11.8499610 8.2694905 8.1041154 10.2177944 2.8927213 0.1557492 10.9189606 2.8187074 8.2537804 10.6984578 10.2051431 10.1476196 9.8688483 8.6701336 0.3561000 0.3502300 -0.0528010 0.3103300 -0.1713200 -0.1713200 0.2448200 -0.0853240 1.1001000 0.2749000 -0.0808060 -0.0808060 0.8137600 0.8137600 0.8137600 -0.0656730 0.7497500 0.0224450 0.0225850 -0.4899500 1.1714000 1.1714000 1.1714000 -0.1220300 -0.0635210 -0.0635210 -0.0635210 0.0034694 -0.1478500 0.2629400 -0.2230500 -0.2230500 -0.4970500 -0.0591340 -0.0528010 0.3103300 0.3058100 0.7239500 -0.2439000 -0.0853240 -0.0853240 0.2526100 -0.0808060 -0.0808060 -0.5171200 -0.5395600 -0.0656730 -0.0656730 0.7497500 0.3100100 -0.5302200 -0.5427700 -0.5427700 -0.4899500 1.1714000 -0.9970100 -0.5260500 -0.1852300 0.000 0.000 0.275 0.275 0.000 0.000 0.814 -0.540 0.000 0.750 0.750 -0.530 0.000 -0.541 -0.541 0.000 0.000 0.000 0.000 1.171 1.171 -0.997 -0.526 0.000 0.000 -0.148 0.115 -0.223 -0.223 0.000 0.000 0.310 0.310 0.724 0.724 0.064 0.235 0.308 0.308 0.185 0.000 0.000 0.275 0.275 0.000 0.000 0.814 -0.540 0.000 0.750 0.750 -0.530 0.000 -0.541 -0.541 0.000 0.000 0.000 0.000 1.171 1.171 -0.997 -0.526 0.000 0.000 -0.148 0.115 -0.223 -0.223 0.000 0.000 0.310 0.310 0.724 0.724 0.064 0.235 0.308 0.308 0.185 6.0546011 4.6793112 4.2432121 14.5468115 9.5329588 4.3781440 8.0383912 9.0394099 10.3029532 8.0825387 5.4287655 3.4776773 9.8293519 10.7378903 12.5729855 9.7513166 12.1360069 10.0884551 9.5198829 8.2712254 5.9544895 12.0808081 0.5707544 6.7606108 5.3256742 6.4896489 9.984942 11.029449 11.713052 10.098263 9.050566 10.180888 7.185496 4.155749 12.517144 12.944603 9.898338 13.042397 7.013729 11.849961 4.636874 10.151986 1.570803 14.812080 6.453429 12.453811 10.283313 9.956648 10.217794 7.628777 12.834788 9.382963 8.597309 10.677676 10.815744 1.378123 3.428772 9.707136 10.488904 11.860517 12.296365 11.224527 8.569376 8.938201 11.966855 13.441921 7.498564 9.872282 11.090913 7.758138 11.4597193 10.7457115 3.1557492 9.1109139 11.5280692 11.4528556 9.2227343 9.0576209 9.0043713 14.5468115 8.3139374 8.0485441 10.1011921 8.7407107 9.2651436 11.1508087 10.4084137 10.1053659 14.7424122 9.0219968 9.9167453 9.6124448 9.7759681 9.0230271 4.8375699 11.8543083 10.8480731 10.9186839 10.3603194 10.3122528 8.6418726 10.1113982 11.4312908 10.2629654 11.4515402 NA 8.7923729 8.3071876 10.2772818 8.0845134 12.3081388 10.1519864 7.8492349 9.2289973 9.0424610 9.0904221 9.7802391 7.9061763 10.7929769 9.4541928 5.1706982 2.1557492 7.3455729 -0.4291485 9.2245265 5.5931535 10.6048970 9.1845751 9.6158628 9.7135310 0.8927407 10.1306408 13.7589882 10.1123664 10.9189606 10.2742568 10.2005977 9.0434766 5.1253742 10.7007127 10.1706056 0.8927407 5.3781405 12.6157775 10.3643891 10.2790075 7.3684471 5.8927140 12.7064149 10.5286133 11.2434321 10.9703308 10.1476196 11.5325972 9.7344354 8.4985636 10.5420599 10.7680025 9.8688483 0.1557492 1.1557492 8.3508499 5.6476023 14.1130620 9.7618451 8.4564821 -0.4291485 8.7218911 9.8722820 7.9822966 8.0465194 7.5191527 12.1716279 4.9283372 7.4442297 TCGA-F5-6811 72 0 NA 31 rectum stage iia t3 n0 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 139.38.0 NA NA 3 3 1 3 1 1 2 2 1 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.77003663 10.75324500 12.48130628 8.14651624 8.82787395 10.55119866 1.49543934 -0.08957433 10.79886462 5.23243052 8.56513788 10.41879186 10.37198133 10.29864835 9.85813878 11.42570885 -0.0362650 -0.0629640 0.3693600 0.0314360 3.6569000 0.1250500 0.1250500 -0.0051227 0.2236000 0.2236000 0.0129340 0.0129340 0.6858900 0.6858900 0.6858900 -0.3916300 2.0840000 0.4107800 0.4107800 -0.0093748 1.8235000 1.8235000 1.8416000 0.0341030 -0.4382200 -0.4242900 -0.4242900 0.0000000 0.2673800 0.2856400 -0.0523960 -0.4277800 -0.4398300 -0.4587500 0.3693600 0.0322810 0.0583670 0.7831100 -0.0550950 -0.0051227 -0.0051227 0.2236000 0.0129340 0.0129340 -0.4385400 -0.4473900 -0.3916300 -0.3916300 -0.4468500 -0.4464200 -0.0198630 -0.4451100 -0.4550600 -0.0093748 1.8235000 -0.4645500 -0.0306770 0.0341030 0.000 0.000 0.224 0.224 0.000 0.000 0.686 -0.447 -0.392 -0.436 -0.436 0.000 0.411 -0.445 -0.445 0.000 0.000 -0.361 0.000 1.824 1.824 0.000 0.000 0.000 0.000 0.267 0.267 0.000 -0.375 0.400 0.400 0.000 0.000 0.783 0.783 0.000 0.125 0.000 0.000 0.000 0.000 0.000 0.224 0.224 0.000 0.000 0.686 -0.447 -0.392 -0.436 -0.436 0.000 0.411 -0.445 -0.445 0.000 0.000 -0.361 0.000 1.824 1.824 0.000 0.000 0.000 0.000 0.267 0.267 0.000 -0.375 0.400 0.400 0.000 0.000 0.783 0.783 0.000 0.125 0.000 0.000 0.000 7.981964 6.893496 2.080419 14.032237 8.158429 7.353445 9.533469 4.195907 11.166416 8.999290 5.921729 3.997961 9.929397 10.903794 11.815513 9.474651 11.775848 9.636720 9.179628 9.526131 5.793144 12.790181 2.495465 3.768481 5.899188 8.304965 10.0816786 11.1605041 12.6237810 9.5952504 7.3699332 10.7109973 7.0551599 5.3198925 12.6340561 13.5078561 9.6004998 12.9239990 6.2680544 12.4813063 6.1296704 10.4612486 0.4954905 14.9339747 4.2680526 10.5521021 10.0990907 10.2779167 10.5511987 9.6281783 12.2939361 8.8022856 8.3534455 10.1548657 10.7712009 -1.0895743 1.9105024 9.6118083 10.0242440 12.1006352 11.9673089 11.0098497 8.2547976 8.8588690 12.0045796 12.8867079 7.4612486 12.6865236 10.6230289 8.1175164 11.12330219 10.53940302 -1.08957433 9.77003663 11.87952853 10.75324500 9.19359016 9.16198414 9.59875208 14.03223730 7.65196870 8.57938684 9.19359016 9.39129214 9.39733686 10.50575936 11.45811938 8.36447219 14.34473912 8.58822141 9.79772247 9.26364878 9.95216100 7.24141883 7.21428220 11.15991163 10.43161147 11.01050706 9.77623512 9.67703072 8.48520904 10.00325900 11.39230127 9.74655228 11.88353727 NA 8.77932441 8.69017192 10.31191471 8.85448164 12.19098267 10.46124860 7.14890666 9.05770667 9.83382936 9.12603485 10.11934580 8.28667049 7.85594548 9.45062979 4.81739302 NA 7.78701905 0.91050243 9.33571772 4.91050243 11.11812634 9.39129214 10.39129204 10.00193718 -1.08957433 10.43455380 13.91186606 9.96984624 10.79886462 10.88742390 9.89918651 9.22338490 5.59700370 11.32756320 10.80057226 -1.08957433 6.82936503 12.05308761 10.02749552 10.73546057 6.78086649 5.62474721 12.52417622 10.38166894 11.46196978 10.94701889 10.29864835 11.33860024 9.62474740 8.88060778 10.55751051 10.76068868 9.85813878 1.23241517 NA 7.91988290 5.38623499 13.81612390 9.44090819 8.96171072 1.23241517 9.02850838 12.68652357 -0.08957433 8.80683411 7.13450333 11.82339121 4.84123851 7.44577718 TCGA-F5-6812 67 0 NA 20 rectum stage iia t3 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 139.38.0 NA NA 2 2 1 6 1 1 1 2 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2621724 11.2829429 11.8157401 7.8534437 8.9727897 9.8044831 6.6805536 0.5106582 10.1942079 1.9256577 8.6156638 10.5958795 10.3670539 10.2210731 9.7281823 12.0207331 0.097470 0.097470 -0.042584 0.114020 -0.056340 -0.056340 -0.056340 -0.378810 -0.019983 -0.019152 0.144070 -0.193810 0.945170 0.945170 0.945170 -0.469340 0.030803 -0.090956 -0.090956 0.031507 0.988150 0.988150 0.988150 -0.017734 0.077071 0.077071 -0.459290 0.068163 0.085582 0.084860 0.000000 -0.447520 -0.484390 -0.042584 -0.042584 0.061437 0.114020 -0.050978 -0.100850 -0.023247 -0.378810 0.488610 -0.193810 -0.193810 -0.483920 -0.477220 -0.469340 -0.469340 0.030803 0.367800 -0.090956 -0.479920 -0.479920 0.031507 0.988150 -0.109390 -0.538260 -0.017734 0.324 -0.356 0.000 0.489 -0.194 -0.194 0.945 -0.477 -0.469 0.000 0.337 0.000 0.000 -0.480 -0.480 0.000 0.000 0.000 0.000 0.988 0.988 -0.109 -0.501 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.324 -0.356 0.000 0.489 -0.194 -0.194 0.945 -0.477 -0.469 0.000 0.337 0.000 0.000 -0.480 -0.480 0.000 0.000 0.000 0.000 0.988 0.988 -0.109 -0.501 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.430 0.000 0.000 0.000 0.000 0.000 0.000 7.547717 6.673859 6.646765 14.403866 9.387145 5.368608 7.075413 2.247593 11.659529 10.568169 6.820484 4.283218 9.863775 10.969035 12.656879 10.075413 11.520923 9.669659 8.556843 10.300705 6.154484 12.509806 3.832556 3.832556 6.002482 7.243079 10.205276 10.821620 12.340483 9.783647 7.154485 10.347731 6.201791 7.187761 12.632593 13.085931 10.091829 13.102307 7.261056 11.815740 6.713568 10.471113 2.925658 14.812791 6.832556 10.994780 10.623068 10.401399 9.804483 9.296353 12.734932 9.139985 7.761716 10.455096 11.097468 1.733007 3.783645 9.957712 10.060092 12.117496 12.123190 11.109611 8.194792 9.598091 11.996458 13.268157 7.429491 10.080484 11.408978 8.042010 11.24984641 10.82690983 3.83255588 9.26217238 12.32907736 11.28294292 8.89577187 9.01047412 10.09433795 14.40386571 8.95908881 8.35820767 10.08174892 9.18540919 9.09559086 10.87585715 11.30341860 8.03805311 14.38628171 9.80371671 10.12778970 9.68804779 9.58030191 6.69385072 8.49172004 10.97347137 10.94212592 10.42501349 10.53715180 10.06393768 8.28154526 10.03940794 11.54817530 9.85935650 12.42409749 NA 9.06265683 8.76486960 10.39987881 8.14483411 12.04119725 10.47111306 8.72656559 9.48025462 9.28431702 9.47737417 9.84154516 7.88856184 6.79164609 9.63991134 2.24759338 -1.07430434 8.39327118 4.90294665 9.00648345 6.44922790 11.37404028 9.34773054 10.39225216 9.72898983 -0.07430434 10.80486614 13.89837644 10.09871825 10.19420786 10.53021904 10.28596427 9.06521712 5.85640312 11.40241202 10.44704054 3.09558691 7.97278971 12.90803558 9.92566585 10.31260607 6.75855636 5.75855636 13.12073039 11.11487264 11.82426721 11.19654514 10.22107315 11.84023783 10.53715180 8.51250543 10.22086076 11.35899046 9.72818226 3.17359120 -1.07430434 8.43391629 4.09558691 14.25945013 9.29961856 8.99310029 2.38509966 8.26902941 10.08048392 3.83255588 8.34562613 7.51812279 11.72898975 5.43346026 8.48408656 TCGA-F5-6813 70 0 NA 21 rectum stage iiic t4a n2 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 12 white not hispanic or latino 139.38.0 NA NA 4 2 1 6 1 1 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.389305 10.730095 16.633630 8.565171 9.812310 10.463048 -1.194625 1.127237 9.784708 1.127237 7.952487 10.876745 10.165032 9.696307 10.334225 11.733986 0.5016800 0.5016800 0.0012481 0.0200630 0.3286600 -0.0549600 -0.1396200 0.0054139 -0.5900000 -0.0049844 -0.0023553 -0.0023553 0.7501300 0.7501300 0.7501300 -0.5765400 0.0058309 3.6569000 0.0031910 -0.0429240 0.9905300 0.9816200 0.9816200 -0.0269880 -0.5881400 -0.5881400 -0.5721900 -0.0082371 0.0140510 0.0140510 -0.5853500 -0.5853500 -0.0073810 -0.0024156 0.0012481 0.0148600 0.0141900 0.5121100 -0.6089300 0.0054139 0.0054139 -0.0049844 -0.0023553 -0.0023553 0.0015255 0.0015255 -0.5765400 -0.5765400 0.0058309 0.5313400 -0.5901900 -0.5856900 -0.5856900 -0.0429240 1.8656000 0.0029133 -0.0227180 -0.0269880 0.000 0.000 -0.590 0.000 0.000 0.000 0.750 0.000 -0.577 0.000 0.526 -0.590 0.000 -0.586 -0.586 0.000 0.000 -0.071 0.502 0.000 0.982 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 0.512 0.512 -0.583 -0.140 0.490 0.490 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.750 0.000 -0.577 0.000 0.526 -0.590 0.000 -0.586 -0.586 0.000 0.000 -0.071 0.502 0.000 0.982 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 0.512 0.512 -0.583 -0.140 0.490 0.490 0.000 7.386483 5.793966 4.827651 14.920366 8.427334 5.612639 4.849679 NA 10.711797 9.414461 5.663265 3.759475 10.116463 10.460366 12.976928 10.168870 12.015040 9.523815 8.377035 9.995725 4.736020 11.745045 3.328851 5.034101 6.491783 7.556826 10.404731 10.903973 12.361549 10.519957 7.970189 10.292118 7.463494 6.206163 12.915032 13.092634 9.614247 12.887764 7.434639 16.633630 6.231548 9.208295 2.612636 14.998808 5.747798 11.321229 10.174335 10.139556 10.463048 8.319010 12.646650 9.527236 8.660151 11.684100 10.387895 2.505713 3.663265 9.930050 10.916092 12.166952 12.337760 11.503336 8.029284 8.793967 12.102342 13.959824 6.776826 10.229449 10.899690 7.653906 11.934566 11.157878 2.390255 9.389305 11.417460 10.730095 9.099903 9.346379 8.436460 14.920366 9.354105 8.414461 10.476824 8.570154 9.269828 11.205361 11.536389 9.011137 14.523093 8.367525 9.954395 10.259068 10.429621 7.773950 8.955030 11.943554 10.209892 11.118165 10.213081 10.354104 8.461529 9.528090 11.804930 10.084313 12.133981 NA 9.344441 9.190066 10.515228 8.778262 12.887931 9.208295 6.606183 9.396805 8.558499 9.736020 10.302136 9.140952 7.819303 9.193300 NA NA 7.715175 4.560171 9.015954 6.014737 11.304630 8.475939 10.647240 9.666369 -1.194625 10.831114 14.095517 9.959468 9.784708 10.622666 10.221024 8.604564 3.805282 10.311590 10.328585 3.197598 8.060311 12.808537 9.433728 10.419532 7.141075 4.663265 12.472727 10.110774 11.126083 11.153457 9.696307 12.019298 9.896057 8.301138 9.462601 11.203759 10.334225 2.805292 -1.194625 8.527800 6.231548 14.014393 9.218910 9.226295 1.975190 9.008777 10.229449 4.805282 7.635006 7.543374 11.725821 3.892741 7.522959 TCGA-F5-6814 57 0 NA 16 rectum stage iia t2 n0 m0 25-9-2014 male 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 158.34.0 NA NA 1 3 NA NA 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.60570044 11.81155941 11.28853189 8.53425852 9.68998802 9.98512226 -0.49370273 NA 10.77167466 0.09125977 8.03773418 11.22252910 10.69401402 10.26082265 9.78886202 8.64845969 0.0242680 0.0270760 -0.0955160 0.0301000 -0.0180780 -0.0180780 0.1311000 0.0104240 -0.0156040 0.0125160 -0.0064184 0.0114000 -0.0709910 -0.0709910 -0.0709910 -0.0107840 -0.1272000 -0.1028900 -0.1028900 -0.0143660 0.1866200 0.1866200 0.3009400 0.0265140 0.0015255 0.0207630 0.0301690 0.0528100 -0.0887720 -0.0683950 -0.0913850 -0.0881320 -0.5180500 -0.0561730 -0.0955160 0.0341130 0.0228250 0.0515300 -0.0268510 0.0104240 0.0011093 0.0058309 0.0114000 0.0114000 0.0311550 0.0200630 -0.0123580 -0.0107840 -0.1272000 -0.1221300 -0.1028900 0.0000000 0.0000000 -0.0143660 0.1866200 -0.1129900 -0.0448220 0.0265140 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.127 -0.127 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.187 0.187 -0.113 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.127 -0.127 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.187 0.187 -0.113 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.879217 5.656099 4.091319 14.631220 9.521768 5.696177 6.932618 8.745951 9.903493 9.985628 6.247819 4.846202 8.816965 10.996702 12.265409 9.265409 11.085904 9.958079 8.635636 9.441518 4.287709 11.523161 4.060938 7.053247 7.135709 7.951367 9.9383725 10.7112295 11.2180197 9.7315600 8.7423667 10.6621196 7.6787804 4.8813905 11.0071945 12.7578351 9.6349914 13.1485736 7.3392425 11.2885319 7.2645758 9.3289235 0.5063988 14.7698236 4.0913190 12.4688872 10.3455565 10.4966764 9.9851223 8.4474003 12.3791237 9.0406555 8.4807672 11.0532471 11.1256556 2.3137102 0.8283066 10.7420678 10.8098480 11.6589544 12.4377365 10.9106959 5.5616347 9.2171592 11.9588513 13.4884550 6.9492956 9.6187922 10.0595020 8.0141472 12.41493293 10.95395254 0.09125977 9.60570044 11.37478944 11.81155941 9.56637299 9.18407222 9.36277823 14.63122034 8.92209435 7.59910947 9.58116310 8.55074679 8.13752965 10.68346066 10.35653945 10.40199229 15.16319647 8.88247799 9.68563973 9.30482450 10.59944008 7.99016865 5.88139299 12.19875022 11.20245084 10.01761116 10.50881606 10.42260536 8.81371290 9.68190214 11.29812605 10.22531362 11.76797601 NA 8.69864564 9.05902181 10.25034556 9.22402918 13.51884626 9.32892351 5.81923643 8.58583762 7.97191884 9.34082372 10.29221371 10.38402023 9.08520660 8.73156003 5.68626239 -1.49370273 7.67377052 0.82830661 9.75368676 4.63563832 11.22509956 9.62723857 10.49219459 10.12198231 -0.49370273 10.91335484 14.22121528 10.30806105 10.77167466 10.57311460 10.27701651 8.81241447 2.20679949 11.53062663 10.07964011 0.82830661 6.06094230 13.07739421 10.16902103 10.66085439 8.26624074 5.20679167 13.43315825 11.42353825 11.01241224 11.32533419 10.26082265 12.17966173 10.85231227 9.03773418 10.06381637 11.65308044 9.78886202 0.09125977 0.50639883 8.71173063 3.31371023 13.34717976 10.15246130 8.87485904 0.50639883 8.95797581 9.61879219 -1.49370273 8.77430971 7.02205261 12.39709193 6.63047391 5.77313921 TCGA-F5-6861 60 0 NA 34 rectum stage iiia t3 n0 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 0 white not hispanic or latino 158.34.0 NA NA 1 2 2 2 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.757973 11.383925 12.209657 8.447588 9.037106 9.652076 1.213254 NA 10.590805 1.213254 7.725601 10.388923 10.490738 9.784278 9.786390 11.496207 -1.3100e-02 -1.3100e-02 2.6864e-05 1.1148e-02 -4.8194e-03 -4.8194e-03 -4.8194e-03 -2.7438e-03 8.8610e-01 -3.1591e-03 5.8579e-03 5.8579e-03 7.6316e-02 7.6316e-02 8.9155e-02 -1.1584e-02 -1.7914e-02 -1.8876e-02 -1.8876e-02 -3.0840e-02 4.5857e-01 4.5857e-01 4.5857e-01 2.8790e-02 -1.3100e-02 -1.3100e-02 -1.3100e-02 7.6661e-03 6.6922e-03 6.6922e-03 -2.0715e-02 -2.0715e-02 -1.7285e-02 2.6864e-05 2.6864e-05 0.0000e+00 -1.3995e-02 1.1845e-02 -4.8194e-03 -2.7438e-03 -9.7918e-03 -3.1591e-03 5.8579e-03 5.8579e-03 -1.8464e-02 -2.5182e-02 -2.1900e-03 -2.1900e-03 -1.7914e-02 -1.7914e-02 -1.8876e-02 -3.2697e-02 -3.2697e-02 -3.0840e-02 4.5857e-01 -6.6164e-03 -2.4909e-02 2.8790e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.486 0.486 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.486 0.486 0.000 6.312819 4.865360 2.213285 15.483349 9.856110 2.493391 9.332966 8.991831 9.768421 8.051587 4.383207 2.213285 9.918176 10.477727 12.256995 9.259239 11.190360 9.542920 8.448957 8.262355 3.653851 11.968052 1.865365 5.653857 8.874553 7.461212 9.7045646 10.7028455 11.9144668 10.0880460 8.0039816 10.0981088 7.6936417 3.9605210 12.0324368 12.8881069 9.7777059 13.1290569 6.5196708 12.2096568 4.6727139 8.4639212 -0.5940076 14.1663633 4.4933912 13.1136119 10.4807397 9.9715073 9.6520761 7.4530533 12.1763867 8.8068087 8.7667763 10.9939411 10.2619656 -0.5940076 0.4058835 9.2364445 10.1461317 11.4933921 12.8470579 10.6437367 7.3745961 9.0243147 11.7567304 13.1888251 7.4720182 9.7874721 10.2778345 8.2229127 12.0061906 10.9564355 -0.5940076 8.7579726 11.0007204 11.3839246 8.9576375 8.7982466 8.3673789 15.4833493 8.3601254 7.6178179 9.3299994 7.4986865 8.7896334 10.7270118 11.1109136 9.9973722 14.1656614 8.4171563 9.1815394 10.3015045 10.3447737 8.4199496 4.2132851 12.0594461 10.8279940 10.6753482 10.4331441 9.9181759 8.4683935 9.3329663 10.6846690 10.7920612 12.5289481 NA 8.8622837 9.0739279 10.0884850 7.2762938 13.4209958 8.4639212 7.4800704 8.1132885 7.7188123 9.9363355 10.0393786 9.4185397 10.3473438 8.2372363 NA NA 6.6105008 NA 9.9951122 5.2003435 11.5090531 9.3528355 9.8052072 10.7576967 0.7278769 10.5886340 14.0137508 9.3090579 10.5908046 10.4639210 10.1946475 8.8704751 4.5144569 11.3238607 10.8008474 -0.5940076 4.1608153 12.6879317 10.0343748 10.5105280 7.3974513 5.4827450 13.0611245 10.9353598 10.9436330 10.7880128 9.7842782 12.3029238 10.7413196 8.2931497 10.5648545 11.8019988 9.7863904 0.4058835 2.7982372 7.6483173 3.9908913 13.6785955 9.5777315 9.2451331 -1.5942254 9.0783723 9.7874721 4.8816646 8.2356519 6.6153825 11.5983762 5.2132851 6.8447208 TCGA-F5-6863 71 0 NA 23 rectum stage iiib t4a n1 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 3 white not hispanic or latino 158.34.0 NA NA 2 2 1 2 3 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.901069 11.381760 11.392174 8.317228 8.690037 9.601681 4.187103 NA 10.582222 3.820322 8.181573 10.719281 9.929946 9.755998 9.605128 11.243714 0.66228000 0.56954000 -0.02235400 -0.03031800 -0.42237000 1.21890000 1.12220000 0.00050253 -0.03645300 -0.03645300 -0.00752390 -0.00752390 1.32570000 1.32570000 1.32570000 0.09603400 0.37341000 -0.63288000 0.03363700 0.10857000 1.47750000 1.47750000 1.50560000 0.12500000 -0.00723960 -0.00723960 -0.13359000 0.53355000 -0.01436000 0.61836000 -0.03045200 -0.02101300 -0.05783900 -0.02389100 -0.05891600 -0.03031800 -0.74910000 0.54001000 -0.46061000 0.00050253 -0.05225400 -0.03645300 -0.00752390 -0.00752390 -0.15515000 -0.15515000 0.05879400 0.10560000 0.37341000 0.37341000 -0.63288000 -0.72741000 -0.74049000 0.10857000 0.73371000 -0.41645000 -0.62678000 0.12500000 0.000 0.000 0.000 0.000 0.000 0.000 1.326 -0.155 0.000 0.373 0.373 -0.559 0.000 -0.728 -0.728 0.109 0.109 0.000 0.570 0.734 1.485 -0.350 -0.627 0.000 0.534 0.000 0.591 0.000 0.000 0.603 0.000 0.000 0.000 0.600 0.600 0.700 1.122 0.000 0.000 0.125 0.000 0.000 0.000 0.000 0.000 0.000 1.326 -0.155 0.000 0.373 0.373 -0.559 0.000 -0.728 -0.728 0.109 0.109 0.000 0.570 0.734 1.485 -0.350 -0.627 0.000 0.534 0.000 0.591 0.000 0.000 0.603 0.000 0.000 0.000 0.600 0.600 0.700 1.122 0.000 0.000 0.125 4.7016766 5.0318274 4.5723925 15.0676857 9.7441961 6.2162492 8.6290316 8.2126389 10.3281160 7.7016766 4.5031324 1.3797318 9.7867130 11.0607361 12.6249619 10.4416021 12.2848133 9.6796108 8.8096038 8.7183260 4.8943230 11.1491143 -0.4275954 4.0959582 5.5496723 6.4303756 9.9577170 10.9430812 12.6669664 10.3607043 7.4942348 10.3680276 5.9122427 3.6167929 12.7563393 12.6391558 9.9886635 12.8559163 6.8438570 11.3921737 2.4792823 9.7460710 -0.4275954 15.3506122 6.7720664 12.2881414 11.4758991 10.3197476 9.6016811 6.6384837 12.1839950 9.5653321 8.8131851 9.5885057 10.7354145 2.4792823 1.3797318 10.3422317 10.7693033 11.7170521 13.0977923 10.8753183 7.9817847 9.1815725 12.0032370 13.2940271 7.3172281 9.2225481 11.0602339 8.7485669 12.0318254 11.1866435 2.8203219 8.9010687 11.5435781 11.3817600 9.1981027 9.0153373 8.9200151 15.0676857 10.1086410 7.1648506 9.5553875 7.6167877 9.5745055 10.9111302 10.7918649 9.3065869 14.6713306 9.1815725 9.3331137 10.2012950 10.6435210 7.0880939 3.9986559 11.9655161 11.2534125 10.8778856 10.4679691 10.2663163 9.6129713 9.3821619 11.0647477 10.0287483 12.2360553 NA 8.8191345 8.7842821 10.3251926 6.6058173 12.6430179 9.7460710 8.3071033 9.5996087 7.5207609 9.5149083 9.9732733 8.7326562 8.1096123 9.8450236 NA NA 6.5667467 0.5724046 8.9647114 6.0562107 11.5138083 8.2377296 10.1168753 9.1460411 1.1573671 10.6290315 14.3949896 10.0101459 10.5822224 10.5982255 10.3314497 8.3570285 4.8577969 10.5867631 10.0170257 3.6167929 2.8943133 12.9478406 9.5038701 10.2571424 7.6413603 5.5265916 13.4219944 10.8125889 10.9836400 11.1618109 9.7559982 12.0453385 10.9238852 8.5207609 10.5320335 11.8883925 9.6051283 NA NA 8.5582925 6.6545429 13.4416503 9.4005302 8.8909367 NA 8.8355104 9.2225481 11.8579405 7.4147444 7.5294961 11.8691667 4.2448186 8.2832004 TCGA-F5-6864 74 0 NA 14 rectum stage iiic t3 n2 m0 25-9-2014 female 2011 NA NA rectal adenocarcinoma yes r0 4 white not hispanic or latino 158.34.0 NA NA 4 1 2 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7055868 10.7823150 12.8728933 8.3108967 9.1041812 10.1894243 3.2422214 0.1833277 11.0937250 2.5052558 7.9971134 10.7497033 9.7782786 9.8524237 9.1307255 8.7720466 -0.0014473 -0.0014473 -0.0206900 -0.0114780 0.8151300 1.0001000 1.0519000 -0.2687700 0.0115770 0.0115770 -0.0587310 -0.0587310 1.0274000 1.0274000 -0.0290380 0.1324300 0.0150280 0.1673000 0.1673000 0.0491140 1.7200000 1.9250000 1.6286000 0.0506050 -0.5851000 0.0000000 -0.0014473 0.2076700 -0.0044312 -0.0147780 -0.0063297 -0.0063297 -0.2791800 -0.0234410 -0.6170000 0.0027745 -0.0111980 0.5181400 -0.6278900 -0.2687700 -0.2661200 0.0239870 -0.0587310 -0.0587310 0.0037465 -0.0268510 0.0094491 -0.6205400 0.0150280 0.0047642 -0.5990600 -0.6168100 -0.6168100 0.0491140 -0.6029300 0.0137720 0.0345360 0.0506050 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.432 0.167 -0.617 -0.617 0.000 0.000 0.000 0.000 0.000 1.547 0.000 0.000 0.208 0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.518 -0.427 0.201 0.128 0.128 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.432 0.167 -0.617 -0.617 0.000 0.000 0.000 0.000 0.000 1.547 0.000 0.000 0.208 0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.518 -0.427 0.201 0.128 0.128 0.000 7.886082 7.231365 5.256580 14.553223 8.699032 5.609595 8.655007 3.990683 10.391160 9.965784 5.929287 4.090227 9.739199 11.022011 12.073850 9.476420 11.172727 10.160612 8.913519 11.078150 6.727652 12.537857 1.598365 7.242226 6.865155 9.005637 10.027776 11.666812 12.250542 9.943775 7.865156 10.736961 6.256580 5.685834 12.891554 13.078402 10.167751 13.072012 6.685832 12.872893 6.090223 9.999249 2.405720 15.133782 5.227726 10.923394 10.722814 9.996044 10.189424 9.118988 12.002447 9.116039 7.966876 9.594843 11.252782 3.768290 3.242221 9.973409 10.250318 12.032867 12.743983 10.683842 9.229547 9.556197 11.964965 12.530677 7.234995 10.655346 11.914368 8.154876 11.4469925 11.0937250 2.4057201 8.7055868 11.6190023 10.7823150 9.1287759 8.9112524 9.3821863 14.5532233 9.0267298 8.3482391 9.9242371 8.7003450 8.8211646 10.9404442 10.7613902 8.9962153 14.1089483 7.9067084 9.8964322 10.6475374 9.9744949 6.6964015 6.9863870 11.3974487 10.6600783 11.7145510 10.2368054 10.2006044 8.6233431 9.6468564 11.2732238 9.9050009 12.0903203 NA 9.1898920 8.9304062 10.2162961 7.8391609 12.4963095 9.9992490 10.3356169 9.5164874 9.4065292 9.5408840 10.3279903 8.3599208 6.9603136 9.8277892 4.7068952 NA 8.0183298 0.5983652 9.7857215 6.2637049 11.3425727 8.5827882 10.2240784 9.5518386 -1.4016348 10.7257191 14.1362856 10.5146222 11.0937250 10.7462105 10.1786281 8.6577140 5.0413131 10.3752138 10.5775482 2.9906826 6.6317926 12.6341996 9.0077603 10.0972188 7.3432035 5.7980427 12.5551087 9.9581191 11.0989625 10.8457037 9.8524237 11.3307490 10.7072206 8.8439223 9.9287262 11.0212227 9.1307255 0.5983652 NA 8.6093450 4.5291088 13.4719578 9.8445164 9.6805186 1.4057201 8.5077526 10.6553458 5.2277257 7.6123901 7.9157820 11.9171948 5.3797284 6.5350078 TCGA-G5-6233 74 1 556 NA rectum stage iic t3 n2 m0 25-9-2014 male 2009 NA NA rectal adenocarcinoma yes r0 27 white not hispanic or latino 122.34.0 NA NA 2 3 2 5 2 2 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.868503 11.024321 11.679212 7.986915 9.408704 11.021020 5.338314 NA 10.314247 2.388355 7.771274 10.999716 10.223545 10.182771 10.329803 8.745908 0.2889900 0.1346700 -0.1069500 0.2977300 0.5222500 0.5222500 0.5222500 0.0716960 0.4536200 0.0000000 0.7381700 0.7381700 2.0654000 2.0654000 1.5353000 -0.1685200 -0.1719400 -0.0150370 -0.0150370 -0.1247100 0.8627700 0.8627700 0.8627700 0.0789370 0.0265310 0.0265310 -0.1767500 0.2787000 -0.1624100 -0.1624100 -0.0467020 -0.5844000 -0.1186300 -0.1069500 -0.1069500 0.2977300 -0.2673100 0.0936830 -0.7083600 0.0716960 0.0716960 -0.0082838 0.7381700 -0.1928600 -0.1737100 -0.1737100 -0.1685200 -0.1685200 -0.1719400 -0.1719400 -0.0150370 -0.2223000 -0.3897000 -0.1247100 0.8627700 -0.1805400 -0.1686400 0.0789370 0.000 0.000 0.454 0.000 0.738 0.545 1.535 -0.174 -0.169 -0.172 -0.172 0.000 0.000 -0.222 -0.222 -0.168 -0.168 0.000 0.000 0.863 0.863 -0.181 -0.169 0.279 0.279 -0.162 -0.162 0.000 0.000 -0.107 -0.107 0.030 -0.267 0.304 0.000 -0.168 0.522 0.493 0.493 0.000 0.000 0.000 0.454 0.000 0.738 0.545 1.535 -0.174 -0.169 -0.172 -0.172 0.000 0.000 -0.222 -0.222 -0.168 -0.168 0.000 0.000 0.863 0.863 -0.181 -0.169 0.279 0.279 -0.162 -0.162 0.000 0.000 -0.107 -0.107 0.030 -0.267 0.304 0.000 -0.168 0.522 0.493 0.493 0.000 7.4603052 6.6568438 3.0163893 14.6867805 9.4949780 6.6838115 8.7233398 0.9289577 10.1691189 8.3904033 5.3039634 3.7869100 10.1168944 10.6627866 11.5891426 10.7931099 10.7358762 10.3303368 9.9366519 4.5727806 3.1768493 11.6825585 0.5138949 6.7102830 7.0988490 7.0110729 9.4544447 10.8425612 12.0200286 9.6720752 8.2372630 10.3893798 6.8054408 4.7362802 11.7084380 12.5964789 9.6154244 12.9455581 7.3509887 11.6792121 4.6568453 8.1697151 1.5138949 14.0967340 5.9623477 12.4459780 9.5279068 10.4257777 11.0210203 7.3383148 12.6815135 9.4815930 9.3244580 11.2659882 10.3217778 1.2508403 0.5138949 10.0963420 10.2709985 11.5213809 11.9886063 11.0872180 8.3842510 9.1720979 12.3334002 13.7204429 6.7744142 10.0196979 10.4519956 8.1383773 11.64959561 10.70000060 0.51389495 8.86850312 11.34017001 11.02432086 9.48447169 9.55371933 8.62762836 14.68678050 8.02168070 7.32980351 10.47388826 9.58355989 8.64831264 10.28207070 10.72982371 9.51184672 13.96604176 9.13349494 9.17447658 10.17328762 10.55463269 7.18631137 6.19570980 12.42727445 11.01306782 9.91476571 9.70206305 10.14142027 10.44793588 9.80313677 10.79620261 9.67795514 12.16822849 NA 8.73788817 8.38630485 10.18925540 7.33406497 12.57986337 8.16971509 6.89470865 8.53069465 7.37600728 9.61367253 9.81156688 8.93939585 8.23042015 9.47774572 -0.07111807 4.51388863 7.49116605 2.38835488 9.92751428 6.05820608 11.40744071 8.92327727 10.37031186 9.68631388 2.51389495 10.20737324 14.92285731 9.95406338 10.31424697 11.13471708 9.68297615 7.93735263 3.45249001 9.89326467 10.86114965 -0.07111807 6.14809215 12.41601019 9.57458236 10.54639126 7.72671476 5.82374172 13.19160598 11.03253949 10.94433886 10.99434000 10.18277137 11.99954796 9.88820138 8.16732882 10.14627578 10.96612761 10.32980329 0.51389495 0.92895770 8.13781652 7.29961100 13.66511434 9.61717412 8.74590756 -1.07096652 8.91443835 10.01969788 0.92895770 7.09383057 5.90620275 12.17388222 4.62936245 6.27765192 TCGA-G5-6235 72 0 NA 1696 rectum stage iiib t3 n1 mx 25-9-2014 male 2007 NA NA rectal adenocarcinoma yes r1 1 white not hispanic or latino 122.34.0 NA NA 1 2 2 2 2 2 2 2 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.315840 11.058771 12.663810 8.477498 9.024501 10.643528 4.886999 -1.135428 11.415136 2.449588 7.952092 10.682812 10.196666 9.954927 10.684808 8.741146 -0.00146560 0.01725600 -0.00885260 0.00000000 0.03848900 0.46115000 0.46115000 -0.02192100 0.00513590 0.00513590 0.00615840 0.00615840 0.80581000 0.80581000 0.65590000 0.01353900 -0.00055444 0.31530000 0.31530000 0.01516800 0.72017000 0.72017000 0.72017000 0.27915000 -0.01936000 -0.00146560 -0.00146560 0.00583090 -0.01009400 -0.00097017 -0.01106000 -0.01106000 -0.01844200 -0.00885260 -0.00885260 0.00777830 -0.00427630 0.32995000 0.00365040 -0.02192100 -0.02192100 -0.00207840 0.00615840 0.00282330 -0.28370000 -0.28370000 0.01433000 0.01433000 -0.00055444 -0.00055444 -0.35099000 -0.34630000 -0.34630000 0.01516800 0.72017000 -0.02384000 -0.01367700 0.27915000 0.000 0.000 0.000 0.000 0.000 0.000 0.656 -0.284 0.000 0.000 0.000 -0.351 0.315 -0.346 -0.346 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.282 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.330 0.330 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.656 -0.284 0.000 0.000 0.000 -0.351 0.315 -0.346 -0.346 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.282 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.330 0.330 0.000 0.423 0.000 0.000 0.000 4.4495944 3.9090242 1.6719727 15.4686463 9.3911286 2.4495878 6.9520924 5.4645408 11.4654714 7.9226213 5.0544535 3.1865639 9.5780158 11.1205430 12.5432295 9.7812553 11.1789293 9.9711922 8.8115356 0.4496406 0.8646517 11.7966595 -1.1354275 6.4344848 8.8939164 7.9090236 9.6631010 10.7319080 11.8791729 9.4765763 8.3179001 10.5724198 7.4570862 4.7715212 12.4095937 13.5411374 9.5624657 13.0889325 6.6060957 12.6638097 2.1865639 6.2569465 -1.1354275 13.9175369 6.1030339 11.9769059 10.5089363 10.0612314 10.6435278 4.4192153 12.8212777 9.2177762 8.9131162 12.0998957 10.7514690 NA -0.1354275 9.5771563 9.8842200 12.1685527 13.5115255 10.6574196 8.5857284 9.2078150 12.1719724 13.0844785 7.3403629 9.8821337 10.6590452 8.3117124 11.0373693 10.8533140 0.8646517 9.3158404 11.6383867 11.0587705 9.1325864 9.5093869 9.3220101 15.4686463 8.9090233 7.8304138 9.4626818 10.1243726 9.3940598 10.4105590 11.6987053 9.2733198 13.8540682 9.2580197 9.1752421 9.4976245 9.5255165 7.8419090 6.4719597 11.8649815 10.3301957 10.2966492 9.4894247 9.5950995 8.2136671 9.8461966 11.2882705 9.6303297 12.1619884 NA 8.4325853 8.1477178 10.1718301 8.4774976 13.3666530 6.2569465 7.4382762 6.8419090 5.7834933 10.0771257 9.7745224 8.5090446 9.3240610 9.4570864 0.8646517 5.9307184 7.3403629 5.8646294 9.3393492 3.8188301 11.3955233 9.0850076 9.8911527 10.2089252 0.4496406 10.3813143 13.8730579 9.2199804 11.4151356 10.9219442 9.5598575 8.4115237 6.5441098 11.0587705 10.7921073 0.4496406 5.5788753 12.4232892 10.5183701 10.4839322 6.9360914 6.3075724 13.3180929 10.9547417 11.3413755 10.2558729 9.9549271 11.6307440 9.6711789 8.2418397 10.5228408 10.7245523 10.6848083 2.9520912 -1.1354275 7.7847735 5.2044812 13.4043940 10.0270206 9.0593861 -0.1354275 8.8400329 9.8821337 1.1865639 8.4192182 6.9835705 12.1762357 4.7953670 4.6719840 TCGA-G5-6572 56 1 1432 NA rectum NA NA NA NA 25-9-2014 male 2004 NA NA rectal adenocarcinoma yes NA 0 white not hispanic or latino 139.38.0 NA NA 3 2 1 2 3 1 1 2 2 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.638895 10.727131 12.314155 8.122441 9.865666 10.356880 3.977390 NA 10.374983 1.691981 8.545298 10.116680 9.897782 9.828134 9.503363 12.023466 0.5754100 0.5754100 -0.0216470 0.0000000 0.5553100 0.5553100 0.5553100 -0.6671600 -0.0124380 -0.0124380 -0.0178030 -0.0178030 0.5647200 0.5647200 1.1046000 0.0200630 0.0289030 0.0295480 0.0295480 0.0345360 1.6351000 1.6351000 1.6688000 0.0798800 -0.6251300 -0.6575600 -0.6703600 0.5011600 -0.0052610 -0.0052610 -0.0206870 -0.0356670 -0.0356670 -0.0216470 -0.0216470 0.0000000 -0.0180780 0.5897300 0.5553100 0.0068044 -0.6671600 -0.0124380 -0.0178030 -0.0178030 -0.0193140 -0.0193140 0.0200630 0.0200630 0.0289030 0.0289030 0.0413170 -0.6848700 -0.6848700 0.0345360 0.5960200 -0.0537460 0.0209030 0.0798800 0.000 -0.667 0.000 0.000 0.000 0.000 0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.669 0.000 0.000 -0.658 -0.082 1.635 1.635 0.000 0.000 0.501 0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.590 0.590 0.555 0.555 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.565 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.669 0.000 0.000 -0.658 -0.082 1.635 1.635 0.000 0.000 0.501 0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.590 0.590 0.555 0.555 0.000 0.000 0.000 6.040717 5.646186 4.215554 15.420148 8.321345 2.499348 9.084306 8.130781 10.587943 8.332234 5.977390 2.013927 9.661375 11.103500 12.961335 9.813522 11.314269 10.326800 9.105617 12.184968 6.604878 12.012930 NA 4.419910 8.049541 7.739113 10.149882 11.453124 12.404623 10.824488 7.139072 10.966076 6.321345 4.183844 12.058857 12.940064 10.185844 12.655878 7.199783 12.314155 5.291902 10.089129 1.861916 15.182464 7.075693 11.721794 10.879959 10.601507 10.356880 7.273189 12.784663 9.140105 9.244658 9.122441 10.634137 1.691981 2.151404 9.846807 10.623465 12.548900 13.924335 11.370149 9.297468 8.646185 12.355547 12.964400 6.784746 10.583772 11.529222 7.463478 11.4126604 10.4376630 2.6919808 8.6388949 11.8996131 10.7271314 9.0928681 9.4708872 9.0810823 15.4201480 9.5584950 6.7032156 9.2233702 7.2919019 8.6078681 10.7942925 11.7962598 8.8458827 13.4892449 7.9159905 9.4585176 10.0610408 10.1585750 6.5121684 2.2769433 11.4047306 11.7032159 9.5852903 10.6256793 9.8781029 8.6745832 9.3002434 11.4729385 9.5890779 11.7173325 NA 8.9576038 9.1604193 9.9099463 6.5807319 13.7563104 10.0891285 7.0495404 8.8391937 8.3889562 9.0918006 10.2872461 9.3697084 7.5623531 9.4552010 0.2769135 NA 5.9208078 2.8619157 9.3915611 5.4062339 10.9701477 9.0746127 10.0756929 10.5499696 -1.3079299 10.5121676 14.1547465 8.4766235 10.3749833 9.5966232 9.6175431 8.8531205 5.9208078 11.9348651 9.7000532 NA 2.4993484 12.7698058 10.7694721 9.6219868 6.3784891 6.8366475 12.7094061 9.7465929 11.2573288 10.6308332 9.8281339 11.7951126 10.2736601 8.3872169 12.5056697 11.0248644 9.5033634 0.2769135 2.5726714 8.0920784 4.6692706 13.6751159 9.2788286 9.4610001 -1.3079299 7.9375415 10.5837724 8.6359687 9.2731704 8.2135893 11.9900513 4.1182517 8.5577218 TCGA-G5-6641 67 0 NA 804 rectum stage iiia t1 n1 mx 25-9-2014 male 2009 NA NA rectal mucinous adenocarcinoma yes r0 1 white not hispanic or latino 139.38.0 NA NA 4 1 3 3 2 2 2 1 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.264898 10.611022 12.814906 8.415544 8.970542 11.473042 3.853087 -1.276136 10.869733 1.723821 8.094488 10.390025 10.541584 10.054718 10.273586 11.626741 0.35480000 0.35480000 0.07003500 0.24918000 -0.29898000 0.77406000 0.77406000 -0.13096000 -0.00124730 -0.00124730 3.65690000 3.65690000 0.24793000 0.24793000 0.73625000 -0.11352000 -0.02562000 0.17302000 0.02844600 0.02146300 0.47976000 0.47976000 0.47976000 0.05110300 -0.53774000 0.71810000 0.35480000 0.00000000 -0.04807200 -0.04807200 -0.10434000 -0.10434000 -0.10888000 -0.57328000 0.07003500 0.24918000 -0.19475000 0.24404000 -0.58696000 -0.13096000 -0.13096000 -0.00124730 -0.26961000 0.05224100 -0.13406000 -0.13406000 -0.26096000 -0.11352000 -0.02562000 -0.02562000 0.17302000 -0.55887000 -0.86358000 0.02146300 -0.25067000 -0.27045000 -0.43225000 0.00083195 -0.131 -0.131 0.000 0.000 0.000 0.000 0.248 -0.134 -0.261 0.000 0.000 0.145 0.145 -0.133 -0.551 0.000 0.000 0.120 0.355 0.229 0.480 -0.270 -0.432 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.206 -0.195 0.244 0.244 -0.587 0.651 0.152 0.152 0.000 -0.131 -0.131 0.000 0.000 0.000 0.000 0.248 -0.134 -0.261 0.000 0.000 0.145 0.145 -0.133 -0.551 0.000 0.000 0.120 0.355 0.229 0.480 -0.270 -0.432 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.206 -0.195 0.244 0.244 -0.587 0.651 0.152 0.152 0.000 3.811266 1.893712 1.723821 15.508677 8.970542 2.424250 9.569291 7.858227 10.493639 7.781793 4.338510 2.045723 9.898727 10.796604 13.459780 9.987070 11.296501 10.445755 8.648614 4.505161 1.893712 11.533770 -1.276136 9.505161 8.272623 8.009203 10.2600484 10.3604257 11.4259738 9.8817796 7.0988406 10.4246743 5.7898909 3.1161152 13.2897957 13.1417196 9.6670485 12.9700964 6.7181547 12.8149059 1.0457225 6.7572246 -1.2761357 14.2128965 4.8937262 11.7750101 10.9027771 11.3946787 11.4730421 5.0457313 12.8288912 9.7599747 8.1975067 12.8686983 10.4500193 0.3087104 0.3087104 9.8893363 10.4870135 11.9638471 12.7706693 11.2333288 9.2444197 8.6003181 11.0304325 13.1515723 7.4853528 9.4015208 10.5614291 7.7238009 11.2733452 11.0703149 -0.2761357 9.2648979 11.5337702 10.6110218 9.2414706 9.0736352 7.7817931 15.5086775 8.3440211 8.0923074 10.0988406 8.6306916 9.2375288 10.5339711 11.5726197 8.5113937 14.0800811 8.6321937 9.1729497 10.0383843 9.7343293 7.0275820 5.4919845 11.4048199 10.2546951 10.4740894 9.8671844 10.1139701 8.0368654 9.8956035 11.6982157 9.8039524 12.6170382 NA 8.9332545 8.6692451 10.8238064 9.7770483 12.5518384 6.7572246 9.4728326 7.4311599 4.8112655 9.4414775 9.8145753 8.3837972 5.9429695 9.4277046 -1.2761357 NA 6.1500661 8.1437613 9.2706955 3.4786871 11.3975519 9.9130080 9.3829052 11.0258688 NA 10.5174044 14.2727735 9.9447839 10.8697332 10.9478028 9.8974782 8.5987824 6.4032814 10.2903310 11.7021738 NA 5.6779986 12.8332237 9.2434375 10.6600710 7.3785801 5.0988406 12.6777247 10.3082940 11.2908065 10.6870585 10.0547180 11.8954471 10.6526896 8.9562219 10.5055706 11.3608788 10.2735858 1.0457225 5.3676576 9.0217376 5.3962280 13.2443584 10.0653200 8.5535237 0.3087104 8.4888219 9.4015208 3.1832324 7.9381205 6.5182172 11.5647757 3.7237988 5.5692906 all_p NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 4.51980440623015e-07 4.32485425101e-07 4.21875017737492e-07 1.00269031584273e-06 1.50161657651689e-06 2.02193859750638e-06 2.39731057892681e-06 3.42096691881884e-06 7.59888169398609e-07 7.83743995888242e-07 8.79773141779164e-07 9.07685215754334e-07 9.28596865790521e-07 1.35444538832732e-06 1.48109214981106e-06 1.5374218833754e-06 2.10479701412309e-06 2.25533501241532e-06 2.41282457243059e-07 2.89055177916592e-07 2.5670830500443e-07 2.32897117700904e-07 3.39835784631692e-07 4.59676136909311e-07 5.33445786475212e-07 6.29531438659306e-07 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA all_q NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 5.98e-12 0.0542 7.19e-05 4.71e-05 5.98e-12 0.00735 0.0283864 0.000148 0.0057 0.0012 0.0102 2.44e-06 0.0138 0.000343 5.98e-12 6.084333e-13 0.01235793 0.06078804 0.0001001394 0.06078804 6.084333e-13 0.0001243236 0.0283864 0.001810372 0.006713189 0.01235793 5.971864e-08 0.02215818 6.084333e-13 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.022085 0.0476 0.033759 0.026518 0.00011678 0.0026067 8.334e-09 0.14858 0.0013072 0.21247 0.023749 0.002811 1.8242e-16 2.1659e-18 3.2651e-06 0.21247 0.13785 1.6108e-08 0.065121 0.075983 5.0663e-23 1.5535e-22 0.0057237 0.14858 1.5121e-10 5.067e-05 0.014935 0.18649 5.6392e-09 1.4203e-09 0.14028 1.228e-22 4.5651e-05 1.5121e-10 4.031e-06 0.0079887 4.4834e-13 0.011406 1.4477e-15 0.0017152 0.015389 0.054507 0.064995 0.13043 0.0046396 0.071679 0.074807 1.1276e-05 1.1226e-35 6.3197e-05 0.079742 2.5437e-09 8.0486e-06 0.095877 1.1956e-26 5.8552e-07 0.00090422 0.071679 1 1 1 1 1 1 0 1 1 1 1 1 0.751 1 1 1 1 1 0.168 0 0 1 1 1 0.0488 1 1 1 1 1 1 1 1 0 0 0.655 1.48e-15 1 1 1 1 0.657 1 0.438 1 1 1 3.24e-12 1.75e-12 1 1 0 0.938 0 0 1 1 3.83e-08 0.0622 7.78e-06 0.617 8.61e-05 0.00071 1 1 1 1 0.0113 2.92e-07 1 0.00476 1 1 1 1 0 1 1 1 1 0.000102694149618551 0.000102694149618551 0.000102694149618551 0.000171749281600215 0.000216876243286083 0.000255452582808359 0.000282680285901806 0.000358477086422581 0.000118742524997077 0.00012140535254568 0.00013510585127288 0.00013820089259357 0.000140186648874511 0.000185600693443561 0.000196063789622726 0.000198854446112011 0.000249965693397258 0.000259203470394623 0.000151447909982534 0.000151447909982534 0.000151447909982534 0.000151447909982534 0.000163617153173756 0.000204716767572562 0.000215867645825695 0.000224636042648902 0.022085 5.0663e-23 5.0663e-23 0.022085 0.21247 0.065121 0.065121 0.065121 2.1659e-18 0.065121 0.21247 0.065121 0.0476 1.6108e-08 0.022085 0.00011678 2.1659e-18 0.0057237 0.065121 0.21247 0.21247 0.023749 0.002811 1.5535e-22 0.022085 0.0476 0.065121 0.022085 0.022085 0.022085 0.21247 0.022085 0.022085 0.065121 0.065121 0.022085 0.0476 0.0057237 1.5535e-22 0.022085 0.065121 0.00011678 0.0057237 0.14858 0.071679 0.095877 0.13043 4.031e-06 0.054507 1.5121e-10 0.13043 0.13043 0.054507 0.014935 0.18649 0.071679 0.095877 0.054507 0.015389 0.095877 0.13043 0.074807 0.095877 1.5121e-10 0.054507 0.095877 0.0046396 0.095877 0.095877 0.13043 0.064995 0.095877 0.095877 0.095877 0.13043 0.054507 0.054507 0.071679 0.095877 4.5651e-05 0.095877 0.095877 0.064995 0.014935 4.5651e-05 0.054113 0.015389 0.095877 0.079742 0.095877 0.071679 0.071679 0.13043 0.054113 0.13043 0.13043 0.095877 0.095877 0.13043 0.095877 0.095877 0.079742 0.071679 0.13043 1.5121e-10 0.095877 0.13043 0.015389 0.014935 0.015389 0.095877 0.054507 4.4834e-13 0.054113 0.054507 0.14028 0.054507 0.095877 0.054113 0.015389 0.014935 0.18649 1.5121e-10 1.5121e-10 0.054507 0.095877 2.5437e-09 0.095877 0.095877 0.015389 0.074807 0.095877 0.015389 0.071679 0.071679 0.095877 0.015389 0.095877 0.014935 0.071679 0.071679 0.015389 0.054113 0.13043 0.054113 6.3197e-05 0.18649 0.095877 0.095877