This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 66 focal events and 8 molecular subtypes across 257 patients, 178 significant findings detected with P value < 0.05 and Q value < 0.25.
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amp_1p32.1 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_1q21.3 cnv correlated to 'CN_CNMF'.
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amp_1q24.3 cnv correlated to 'CN_CNMF'.
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amp_2p11.2 cnv correlated to 'CN_CNMF'.
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amp_3p12.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_4q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_5p15.33 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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amp_6p21.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_6q25.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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amp_7q31.2 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_12q15 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_13q34 cnv correlated to 'CN_CNMF'.
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amp_15q26.3 cnv correlated to 'CN_CNMF'.
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amp_17p12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_17p11.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_19p13.2 cnv correlated to 'CN_CNMF'.
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amp_19q12 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_20q13.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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amp_21q21.1 cnv correlated to 'CN_CNMF'.
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amp_xp21.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_xq21.1 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_1p36.32 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1q44 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_2p25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_2q37.3 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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del_2q37.3 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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del_3p21.31 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_3q29 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_4q35.1 cnv correlated to 'CN_CNMF'.
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del_6p25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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del_7q36.3 cnv correlated to 'CN_CNMF'.
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del_8p23.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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del_9p21.3 cnv correlated to 'MIRSEQ_MATURE_CNMF'.
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del_9q34.3 cnv correlated to 'CN_CNMF'.
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del_10p15.3 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_10q23.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q26.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11p15.5 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_11q24.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_12p13.1 cnv correlated to 'CN_CNMF'.
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del_12q12 cnv correlated to 'CN_CNMF'.
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del_12q24.33 cnv correlated to 'CN_CNMF'.
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del_13q14.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_14q24.1 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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del_16q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_16q23.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_17q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_17q25.3 cnv correlated to 'CN_CNMF'.
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del_18q23 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19p13.3 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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del_19q13.43 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_21q11.2 cnv correlated to 'CN_CNMF'.
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del_22q13.32 cnv correlated to 'CN_CNMF'.
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del_xp21.1 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_xq21.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_xq22.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
amp 12q15 | 94 (37%) | 163 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
del 1p36 32 | 69 (27%) | 188 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00021 (0.0817) |
del 10q23 31 | 138 (54%) | 119 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00042 (0.156) |
0.00041 (0.153) |
del 10q26 3 | 132 (51%) | 125 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00014 (0.0557) |
2e-05 (0.00876) |
8e-05 (0.0331) |
0.00029 (0.11) |
del 13q14 2 | 180 (70%) | 77 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00024 (0.0922) |
0.00022 (0.0851) |
del 16q11 2 | 130 (51%) | 127 |
1e-05 (0.00528) |
7e-05 (0.0293) |
0.00027 (0.103) |
0.00068 (0.239) |
0.00303 (0.936) |
0.0003 (0.114) |
2e-05 (0.00876) |
4e-05 (0.0171) |
del 17p13 1 | 129 (50%) | 128 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
4e-05 (0.0171) |
3e-05 (0.013) |
4e-05 (0.0171) |
3e-05 (0.013) |
0.00077 (0.266) |
amp 6q25 1 | 75 (29%) | 182 |
0.00023 (0.0885) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.0006 (0.213) |
0.0001 (0.0407) |
0.00396 (1.00) |
0.00812 (1.00) |
del 2p25 3 | 94 (37%) | 163 |
1e-05 (0.00528) |
3e-05 (0.013) |
1e-05 (0.00528) |
0.00097 (0.328) |
0.00033 (0.125) |
1e-05 (0.00528) |
0.00021 (0.0817) |
0.00074 (0.258) |
del xq21 1 | 114 (44%) | 143 |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00033 (0.125) |
0.00017 (0.067) |
0.00019 (0.0741) |
0.00049 (0.179) |
0.0255 (1.00) |
0.0303 (1.00) |
del xq22 3 | 123 (48%) | 134 |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
2e-05 (0.00876) |
0.00048 (0.176) |
9e-05 (0.0371) |
0.017 (1.00) |
0.0338 (1.00) |
del 3p21 31 | 65 (25%) | 192 |
0.0101 (1.00) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00017 (0.067) |
0.00798 (1.00) |
0.00186 (0.601) |
1e-05 (0.00528) |
del 16q23 1 | 134 (52%) | 123 |
1e-05 (0.00528) |
0.00044 (0.162) |
0.00118 (0.393) |
0.00354 (1.00) |
0.00511 (1.00) |
0.00014 (0.0557) |
1e-05 (0.00528) |
7e-05 (0.0293) |
amp 3p12 1 | 69 (27%) | 188 |
0.00017 (0.067) |
0.00059 (0.211) |
7e-05 (0.0293) |
9e-05 (0.0371) |
0.506 (1.00) |
0.00339 (1.00) |
0.00121 (0.402) |
0.00237 (0.751) |
amp 4q12 | 78 (30%) | 179 |
0.00036 (0.135) |
0.00012 (0.0482) |
1e-05 (0.00528) |
0.00051 (0.185) |
0.0556 (1.00) |
0.0134 (1.00) |
0.0474 (1.00) |
0.0195 (1.00) |
amp 6p21 1 | 60 (23%) | 197 |
3e-05 (0.013) |
1e-05 (0.00528) |
0.00045 (0.165) |
0.00012 (0.0482) |
0.0183 (1.00) |
0.0112 (1.00) |
0.289 (1.00) |
0.0419 (1.00) |
amp 7q31 2 | 77 (30%) | 180 |
0.00656 (1.00) |
9e-05 (0.0371) |
0.0001 (0.0407) |
0.00188 (0.605) |
0.00148 (0.487) |
0.0457 (1.00) |
5e-05 (0.0212) |
0.00041 (0.153) |
amp 20q13 33 | 98 (38%) | 159 |
1e-05 (0.00528) |
6e-05 (0.0253) |
6e-05 (0.0253) |
0.00117 (0.391) |
0.0288 (1.00) |
0.0006 (0.213) |
0.0135 (1.00) |
0.012 (1.00) |
del 1q44 | 80 (31%) | 177 |
5e-05 (0.0212) |
1e-05 (0.00528) |
3e-05 (0.013) |
6e-05 (0.0253) |
0.0163 (1.00) |
0.00703 (1.00) |
0.138 (1.00) |
0.00554 (1.00) |
del 17q11 2 | 81 (32%) | 176 |
0.0001 (0.0407) |
1e-05 (0.00528) |
2e-05 (0.00876) |
0.00013 (0.052) |
0.0091 (1.00) |
0.122 (1.00) |
0.012 (1.00) |
0.0162 (1.00) |
amp 1p32 1 | 94 (37%) | 163 |
0.00083 (0.284) |
1e-05 (0.00528) |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00914 (1.00) |
0.00473 (1.00) |
0.211 (1.00) |
0.00073 (0.255) |
amp 17p12 | 102 (40%) | 155 |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00795 (1.00) |
0.0001 (0.0407) |
0.373 (1.00) |
0.00195 (0.622) |
0.0466 (1.00) |
0.00977 (1.00) |
del 6p25 3 | 81 (32%) | 176 |
1e-05 (0.00528) |
0.00059 (0.211) |
0.00014 (0.0557) |
0.00132 (0.437) |
0.0144 (1.00) |
0.0257 (1.00) |
0.0359 (1.00) |
0.272 (1.00) |
del 8p23 3 | 81 (32%) | 176 |
3e-05 (0.013) |
1e-05 (0.00528) |
0.00059 (0.211) |
0.0022 (0.7) |
0.00746 (1.00) |
0.00419 (1.00) |
0.00928 (1.00) |
0.00106 (0.356) |
del 18q23 | 86 (33%) | 171 |
0.0017 (0.554) |
0.00017 (0.067) |
1e-05 (0.00528) |
0.00349 (1.00) |
0.01 (1.00) |
0.146 (1.00) |
0.133 (1.00) |
0.00035 (0.132) |
amp 5p15 33 | 119 (46%) | 138 |
1e-05 (0.00528) |
0.0129 (1.00) |
0.0271 (1.00) |
0.0005 (0.182) |
0.343 (1.00) |
0.0134 (1.00) |
0.688 (1.00) |
0.747 (1.00) |
amp 17p11 2 | 104 (40%) | 153 |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00526 (1.00) |
0.00441 (1.00) |
0.778 (1.00) |
0.00188 (0.605) |
0.0852 (1.00) |
0.00578 (1.00) |
amp 19q12 | 93 (36%) | 164 |
1e-05 (0.00528) |
7e-05 (0.0293) |
0.0317 (1.00) |
0.00581 (1.00) |
0.693 (1.00) |
0.00931 (1.00) |
0.769 (1.00) |
0.0264 (1.00) |
amp xp21 2 | 97 (38%) | 160 |
1e-05 (0.00528) |
0.00027 (0.103) |
0.116 (1.00) |
0.00688 (1.00) |
0.925 (1.00) |
0.0405 (1.00) |
0.304 (1.00) |
0.0109 (1.00) |
amp xq21 1 | 46 (18%) | 211 |
0.00013 (0.052) |
0.00051 (0.185) |
0.0396 (1.00) |
0.0237 (1.00) |
0.109 (1.00) |
0.405 (1.00) |
0.589 (1.00) |
0.586 (1.00) |
del 2q37 3 | 108 (42%) | 149 |
1e-05 (0.00528) |
0.006 (1.00) |
0.0183 (1.00) |
0.00039 (0.146) |
0.204 (1.00) |
0.00632 (1.00) |
0.0548 (1.00) |
0.0492 (1.00) |
del 2q37 3 | 110 (43%) | 147 |
1e-05 (0.00528) |
0.00098 (0.33) |
0.00811 (1.00) |
0.0005 (0.182) |
0.631 (1.00) |
0.0246 (1.00) |
0.477 (1.00) |
0.156 (1.00) |
del 3q29 | 54 (21%) | 203 |
0.00067 (0.236) |
0.00022 (0.0851) |
0.198 (1.00) |
0.0839 (1.00) |
0.301 (1.00) |
0.0384 (1.00) |
0.215 (1.00) |
0.071 (1.00) |
del 10p15 3 | 128 (50%) | 129 |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.364 (1.00) |
0.00901 (1.00) |
0.284 (1.00) |
0.0195 (1.00) |
0.727 (1.00) |
0.566 (1.00) |
del 11p15 5 | 110 (43%) | 147 |
1e-05 (0.00528) |
0.00054 (0.194) |
0.487 (1.00) |
0.145 (1.00) |
0.477 (1.00) |
0.318 (1.00) |
0.737 (1.00) |
0.758 (1.00) |
del 11q24 2 | 123 (48%) | 134 |
1e-05 (0.00528) |
1e-05 (0.00528) |
0.00243 (0.768) |
0.00134 (0.442) |
0.0545 (1.00) |
0.0407 (1.00) |
0.376 (1.00) |
0.0329 (1.00) |
del 14q24 1 | 80 (31%) | 177 |
1e-05 (0.00528) |
0.00078 (0.268) |
0.235 (1.00) |
1e-05 (0.00528) |
0.108 (1.00) |
0.00446 (1.00) |
0.162 (1.00) |
0.0257 (1.00) |
del 19p13 3 | 70 (27%) | 187 |
9e-05 (0.0371) |
0.00181 (0.588) |
0.0001 (0.0407) |
0.00453 (1.00) |
0.0183 (1.00) |
0.00396 (1.00) |
0.00114 (0.382) |
0.0192 (1.00) |
del 19q13 43 | 106 (41%) | 151 |
1e-05 (0.00528) |
0.00038 (0.142) |
0.39 (1.00) |
0.276 (1.00) |
0.385 (1.00) |
0.0333 (1.00) |
0.435 (1.00) |
0.00767 (1.00) |
del xp21 1 | 55 (21%) | 202 |
0.00043 (0.159) |
0.00061 (0.215) |
0.0101 (1.00) |
0.0249 (1.00) |
0.00858 (1.00) |
0.1 (1.00) |
0.32 (1.00) |
0.109 (1.00) |
amp 1q21 3 | 104 (40%) | 153 |
1e-05 (0.00528) |
0.00799 (1.00) |
0.174 (1.00) |
0.0919 (1.00) |
0.554 (1.00) |
0.132 (1.00) |
0.0624 (1.00) |
0.248 (1.00) |
amp 1q24 3 | 102 (40%) | 155 |
1e-05 (0.00528) |
0.00504 (1.00) |
0.0474 (1.00) |
0.213 (1.00) |
0.888 (1.00) |
0.135 (1.00) |
0.616 (1.00) |
0.491 (1.00) |
amp 2p11 2 | 64 (25%) | 193 |
0.00054 (0.194) |
0.00876 (1.00) |
0.917 (1.00) |
0.877 (1.00) |
1 (1.00) |
0.316 (1.00) |
0.767 (1.00) |
1 (1.00) |
amp 13q34 | 54 (21%) | 203 |
0.00014 (0.0557) |
0.0107 (1.00) |
0.219 (1.00) |
0.0333 (1.00) |
0.512 (1.00) |
0.141 (1.00) |
0.803 (1.00) |
0.00977 (1.00) |
amp 15q26 3 | 84 (33%) | 173 |
1e-05 (0.00528) |
0.00422 (1.00) |
0.849 (1.00) |
0.278 (1.00) |
0.812 (1.00) |
0.184 (1.00) |
0.878 (1.00) |
0.697 (1.00) |
amp 19p13 2 | 107 (42%) | 150 |
1e-05 (0.00528) |
0.0186 (1.00) |
0.0835 (1.00) |
0.0493 (1.00) |
0.76 (1.00) |
0.267 (1.00) |
0.946 (1.00) |
0.0811 (1.00) |
amp 21q21 1 | 73 (28%) | 184 |
1e-05 (0.00528) |
0.00079 (0.271) |
0.0852 (1.00) |
0.248 (1.00) |
0.397 (1.00) |
0.141 (1.00) |
0.603 (1.00) |
0.374 (1.00) |
del 4q35 1 | 94 (37%) | 163 |
1e-05 (0.00528) |
0.00194 (0.621) |
0.0897 (1.00) |
0.0444 (1.00) |
0.859 (1.00) |
0.108 (1.00) |
1 (1.00) |
0.551 (1.00) |
del 7q36 3 | 71 (28%) | 186 |
2e-05 (0.00876) |
0.0622 (1.00) |
0.0174 (1.00) |
0.157 (1.00) |
0.108 (1.00) |
0.00554 (1.00) |
0.086 (1.00) |
0.514 (1.00) |
del 9p21 3 | 114 (44%) | 143 |
0.0332 (1.00) |
0.111 (1.00) |
0.00074 (0.258) |
0.00582 (1.00) |
0.0251 (1.00) |
0.557 (1.00) |
7e-05 (0.0293) |
0.0016 (0.525) |
del 9q34 3 | 61 (24%) | 196 |
1e-05 (0.00528) |
0.00246 (0.775) |
0.0254 (1.00) |
0.132 (1.00) |
0.00268 (0.836) |
0.00271 (0.843) |
0.105 (1.00) |
0.0408 (1.00) |
del 12p13 1 | 87 (34%) | 170 |
1e-05 (0.00528) |
0.00084 (0.286) |
0.0313 (1.00) |
0.00535 (1.00) |
0.227 (1.00) |
0.0337 (1.00) |
0.33 (1.00) |
0.33 (1.00) |
del 12q12 | 56 (22%) | 201 |
9e-05 (0.0371) |
0.00874 (1.00) |
0.0953 (1.00) |
0.0158 (1.00) |
0.0446 (1.00) |
0.0304 (1.00) |
0.108 (1.00) |
0.395 (1.00) |
del 12q24 33 | 69 (27%) | 188 |
8e-05 (0.0331) |
0.00167 (0.546) |
0.725 (1.00) |
0.0171 (1.00) |
0.242 (1.00) |
0.125 (1.00) |
0.159 (1.00) |
0.464 (1.00) |
del 17q25 3 | 67 (26%) | 190 |
1e-05 (0.00528) |
0.00742 (1.00) |
0.196 (1.00) |
0.359 (1.00) |
0.608 (1.00) |
0.00782 (1.00) |
0.207 (1.00) |
0.104 (1.00) |
del 21q11 2 | 51 (20%) | 206 |
0.00044 (0.162) |
0.22 (1.00) |
0.0361 (1.00) |
0.282 (1.00) |
0.00246 (0.775) |
0.955 (1.00) |
0.0681 (1.00) |
0.288 (1.00) |
del 22q13 32 | 83 (32%) | 174 |
1e-05 (0.00528) |
0.0629 (1.00) |
0.845 (1.00) |
0.0356 (1.00) |
0.287 (1.00) |
0.44 (1.00) |
0.946 (1.00) |
0.534 (1.00) |
amp 8p11 22 | 81 (32%) | 176 |
0.00092 (0.313) |
0.0835 (1.00) |
0.00291 (0.902) |
0.0362 (1.00) |
0.151 (1.00) |
0.0103 (1.00) |
0.421 (1.00) |
0.164 (1.00) |
amp 8q24 21 | 83 (32%) | 174 |
0.00782 (1.00) |
0.0431 (1.00) |
0.0338 (1.00) |
0.238 (1.00) |
0.539 (1.00) |
0.291 (1.00) |
0.174 (1.00) |
0.348 (1.00) |
amp 11q22 2 | 36 (14%) | 221 |
0.0269 (1.00) |
0.0285 (1.00) |
0.0129 (1.00) |
0.0532 (1.00) |
0.316 (1.00) |
0.00428 (1.00) |
0.651 (1.00) |
0.0549 (1.00) |
amp 17q24 3 | 79 (31%) | 178 |
0.00096 (0.325) |
0.00248 (0.776) |
0.0691 (1.00) |
0.00477 (1.00) |
0.106 (1.00) |
0.153 (1.00) |
0.066 (1.00) |
0.256 (1.00) |
del 3q13 31 | 51 (20%) | 206 |
0.00665 (1.00) |
0.00183 (0.593) |
0.0115 (1.00) |
0.0109 (1.00) |
0.0177 (1.00) |
0.0186 (1.00) |
0.0216 (1.00) |
0.0306 (1.00) |
del 5p15 33 | 33 (13%) | 224 |
0.243 (1.00) |
0.0868 (1.00) |
0.00077 (0.266) |
0.00075 (0.26) |
0.132 (1.00) |
0.611 (1.00) |
0.0495 (1.00) |
0.0552 (1.00) |
del 6q14 1 | 78 (30%) | 179 |
0.00824 (1.00) |
0.00443 (1.00) |
0.231 (1.00) |
0.565 (1.00) |
0.453 (1.00) |
0.591 (1.00) |
0.0368 (1.00) |
0.967 (1.00) |
del 9p24 3 | 100 (39%) | 157 |
0.215 (1.00) |
0.732 (1.00) |
0.0234 (1.00) |
0.438 (1.00) |
0.198 (1.00) |
0.913 (1.00) |
0.0671 (1.00) |
0.803 (1.00) |
del 21q22 3 | 66 (26%) | 191 |
0.00474 (1.00) |
0.0082 (1.00) |
0.0208 (1.00) |
0.0654 (1.00) |
0.436 (1.00) |
0.0572 (1.00) |
0.431 (1.00) |
0.48 (1.00) |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 1(1P32.1) MUTATED | 15 | 14 | 12 | 3 | 3 | 35 | 3 |
AMP PEAK 1(1P32.1) WILD-TYPE | 27 | 27 | 45 | 29 | 15 | 8 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 1(1P32.1) MUTATED | 25 | 16 | 45 | 8 |
AMP PEAK 1(1P32.1) WILD-TYPE | 43 | 60 | 18 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 1(1P32.1) MUTATED | 19 | 8 | 10 | 7 | 43 | 6 | 1 |
AMP PEAK 1(1P32.1) WILD-TYPE | 28 | 14 | 39 | 21 | 16 | 23 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 2(1Q21.3) MUTATED | 15 | 6 | 17 | 15 | 18 | 32 | 1 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 11 | 52 | 26 | 36 | 16 | 12 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 3(1Q24.3) MUTATED | 13 | 11 | 20 | 12 | 14 | 31 | 1 |
AMP PEAK 3(1Q24.3) WILD-TYPE | 13 | 47 | 23 | 39 | 20 | 13 | 0 |
P value = 0.00054 (Fisher's exact test), Q value = 0.19
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 4(2P11.2) MUTATED | 3 | 5 | 15 | 12 | 16 | 13 | 0 |
AMP PEAK 4(2P11.2) WILD-TYPE | 23 | 53 | 28 | 39 | 18 | 31 | 1 |
P value = 0.00017 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 5(3P12.1) MUTATED | 11 | 9 | 9 | 6 | 14 | 20 | 0 |
AMP PEAK 5(3P12.1) WILD-TYPE | 15 | 49 | 34 | 45 | 20 | 24 | 1 |
P value = 0.00059 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 5(3P12.1) MUTATED | 14 | 11 | 15 | 1 | 1 | 18 | 0 |
AMP PEAK 5(3P12.1) WILD-TYPE | 28 | 30 | 42 | 31 | 17 | 25 | 5 |
P value = 7e-05 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 5(3P12.1) MUTATED | 21 | 16 | 28 | 3 |
AMP PEAK 5(3P12.1) WILD-TYPE | 47 | 60 | 35 | 43 |
P value = 9e-05 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 5(3P12.1) MUTATED | 18 | 7 | 12 | 2 | 25 | 4 | 0 |
AMP PEAK 5(3P12.1) WILD-TYPE | 29 | 15 | 37 | 26 | 34 | 25 | 19 |
P value = 0.00036 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 6(4Q12) MUTATED | 8 | 7 | 12 | 13 | 16 | 22 | 0 |
AMP PEAK 6(4Q12) WILD-TYPE | 18 | 51 | 31 | 38 | 18 | 22 | 1 |
P value = 0.00012 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 6(4Q12) MUTATED | 16 | 12 | 11 | 5 | 1 | 23 | 3 |
AMP PEAK 6(4Q12) WILD-TYPE | 26 | 29 | 46 | 27 | 17 | 20 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 6(4Q12) MUTATED | 26 | 14 | 32 | 6 |
AMP PEAK 6(4Q12) WILD-TYPE | 42 | 62 | 31 | 40 |
P value = 0.00051 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 6(4Q12) MUTATED | 19 | 8 | 7 | 8 | 28 | 7 | 1 |
AMP PEAK 6(4Q12) WILD-TYPE | 28 | 14 | 42 | 20 | 31 | 22 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 7(5P15.33) MUTATED | 26 | 14 | 23 | 21 | 14 | 21 | 0 |
AMP PEAK 7(5P15.33) WILD-TYPE | 0 | 44 | 20 | 30 | 20 | 23 | 1 |
P value = 5e-04 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 7(5P15.33) MUTATED | 33 | 8 | 23 | 9 | 32 | 6 | 7 |
AMP PEAK 7(5P15.33) WILD-TYPE | 14 | 14 | 26 | 19 | 27 | 23 | 12 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 8(6P21.1) MUTATED | 10 | 5 | 14 | 4 | 8 | 19 | 0 |
AMP PEAK 8(6P21.1) WILD-TYPE | 16 | 53 | 29 | 47 | 26 | 25 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 8(6P21.1) MUTATED | 20 | 5 | 5 | 5 | 0 | 17 | 3 |
AMP PEAK 8(6P21.1) WILD-TYPE | 22 | 36 | 52 | 27 | 18 | 26 | 2 |
P value = 0.00045 (Fisher's exact test), Q value = 0.17
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 8(6P21.1) MUTATED | 25 | 7 | 19 | 9 |
AMP PEAK 8(6P21.1) WILD-TYPE | 43 | 69 | 44 | 37 |
P value = 0.00012 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 8(6P21.1) MUTATED | 21 | 3 | 3 | 6 | 20 | 4 | 3 |
AMP PEAK 8(6P21.1) WILD-TYPE | 26 | 19 | 46 | 22 | 39 | 25 | 16 |
P value = 0.00023 (Fisher's exact test), Q value = 0.089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 9(6Q25.1) MUTATED | 10 | 11 | 23 | 6 | 10 | 15 | 0 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 16 | 47 | 20 | 45 | 24 | 29 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 9(6Q25.1) MUTATED | 27 | 15 | 7 | 3 | 1 | 16 | 1 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 15 | 26 | 50 | 29 | 17 | 27 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 9(6Q25.1) MUTATED | 38 | 8 | 20 | 8 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 30 | 68 | 43 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 9(6Q25.1) MUTATED | 26 | 13 | 5 | 8 | 17 | 3 | 2 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 21 | 9 | 44 | 20 | 42 | 26 | 17 |
P value = 6e-04 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
AMP PEAK 9(6Q25.1) MUTATED | 43 | 16 | 16 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 66 | 31 | 83 |
P value = 1e-04 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
AMP PEAK 9(6Q25.1) MUTATED | 37 | 14 | 22 | 2 |
AMP PEAK 9(6Q25.1) WILD-TYPE | 45 | 23 | 92 | 20 |
P value = 9e-05 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 10(7Q31.2) MUTATED | 21 | 13 | 8 | 6 | 1 | 17 | 3 |
AMP PEAK 10(7Q31.2) WILD-TYPE | 21 | 28 | 49 | 26 | 17 | 26 | 2 |
P value = 1e-04 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 10(7Q31.2) MUTATED | 28 | 10 | 27 | 12 |
AMP PEAK 10(7Q31.2) WILD-TYPE | 40 | 66 | 36 | 34 |
P value = 5e-05 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
AMP PEAK 10(7Q31.2) MUTATED | 24 | 11 | 26 |
AMP PEAK 10(7Q31.2) WILD-TYPE | 61 | 53 | 19 |
P value = 0.00041 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
AMP PEAK 10(7Q31.2) MUTATED | 11 | 12 | 5 | 12 | 1 | 3 | 12 | 5 |
AMP PEAK 10(7Q31.2) WILD-TYPE | 13 | 20 | 32 | 11 | 11 | 20 | 9 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 14(12Q15) MUTATED | 9 | 19 | 41 | 11 | 7 | 7 | 0 |
AMP PEAK 14(12Q15) WILD-TYPE | 17 | 39 | 2 | 40 | 27 | 37 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 14(12Q15) MUTATED | 27 | 25 | 1 | 13 | 2 | 14 | 2 |
AMP PEAK 14(12Q15) WILD-TYPE | 15 | 16 | 56 | 19 | 16 | 29 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 14(12Q15) MUTATED | 43 | 2 | 26 | 23 |
AMP PEAK 14(12Q15) WILD-TYPE | 25 | 74 | 37 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 14(12Q15) MUTATED | 30 | 13 | 1 | 19 | 24 | 1 | 6 |
AMP PEAK 14(12Q15) WILD-TYPE | 17 | 9 | 48 | 9 | 35 | 28 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
AMP PEAK 14(12Q15) MUTATED | 58 | 23 | 11 |
AMP PEAK 14(12Q15) WILD-TYPE | 51 | 24 | 88 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
AMP PEAK 14(12Q15) MUTATED | 50 | 19 | 16 | 7 |
AMP PEAK 14(12Q15) WILD-TYPE | 32 | 18 | 98 | 15 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
AMP PEAK 14(12Q15) MUTATED | 48 | 7 | 20 |
AMP PEAK 14(12Q15) WILD-TYPE | 37 | 57 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
AMP PEAK 14(12Q15) MUTATED | 8 | 27 | 0 | 10 | 1 | 10 | 10 | 9 |
AMP PEAK 14(12Q15) WILD-TYPE | 16 | 5 | 37 | 13 | 11 | 13 | 11 | 13 |
P value = 0.00014 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 15(13Q34) MUTATED | 7 | 4 | 5 | 8 | 11 | 19 | 0 |
AMP PEAK 15(13Q34) WILD-TYPE | 19 | 54 | 38 | 43 | 23 | 25 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 16(15Q26.3) MUTATED | 17 | 0 | 18 | 20 | 18 | 11 | 0 |
AMP PEAK 16(15Q26.3) WILD-TYPE | 9 | 58 | 25 | 31 | 16 | 33 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 17(17P12) MUTATED | 10 | 4 | 12 | 21 | 34 | 20 | 1 |
AMP PEAK 17(17P12) WILD-TYPE | 16 | 54 | 31 | 30 | 0 | 24 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 17(17P12) MUTATED | 19 | 8 | 32 | 6 | 2 | 27 | 1 |
AMP PEAK 17(17P12) WILD-TYPE | 23 | 33 | 25 | 26 | 16 | 16 | 4 |
P value = 1e-04 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
AMP PEAK 17(17P12) MUTATED | 24 | 2 | 26 | 10 | 27 | 11 | 1 |
AMP PEAK 17(17P12) WILD-TYPE | 23 | 20 | 23 | 18 | 32 | 18 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 18(17P11.2) MUTATED | 12 | 4 | 11 | 21 | 33 | 22 | 1 |
AMP PEAK 18(17P11.2) WILD-TYPE | 14 | 54 | 32 | 30 | 1 | 22 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 18(17P11.2) MUTATED | 20 | 7 | 30 | 7 | 1 | 30 | 1 |
AMP PEAK 18(17P11.2) WILD-TYPE | 22 | 34 | 27 | 25 | 17 | 13 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 20(19P13.2) MUTATED | 17 | 6 | 25 | 21 | 15 | 23 | 0 |
AMP PEAK 20(19P13.2) WILD-TYPE | 9 | 52 | 18 | 30 | 19 | 21 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 21(19Q12) MUTATED | 17 | 2 | 20 | 7 | 21 | 26 | 0 |
AMP PEAK 21(19Q12) WILD-TYPE | 9 | 56 | 23 | 44 | 13 | 18 | 1 |
P value = 7e-05 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 21(19Q12) MUTATED | 23 | 10 | 15 | 8 | 2 | 25 | 2 |
AMP PEAK 21(19Q12) WILD-TYPE | 19 | 31 | 42 | 24 | 16 | 18 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 22(20Q13.33) MUTATED | 18 | 6 | 22 | 19 | 15 | 18 | 0 |
AMP PEAK 22(20Q13.33) WILD-TYPE | 8 | 52 | 21 | 32 | 19 | 26 | 1 |
P value = 6e-05 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 22(20Q13.33) MUTATED | 25 | 12 | 13 | 10 | 3 | 27 | 1 |
AMP PEAK 22(20Q13.33) WILD-TYPE | 17 | 29 | 44 | 22 | 15 | 16 | 4 |
P value = 6e-05 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
AMP PEAK 22(20Q13.33) MUTATED | 29 | 16 | 37 | 15 |
AMP PEAK 22(20Q13.33) WILD-TYPE | 39 | 60 | 26 | 31 |
P value = 6e-04 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
AMP PEAK 22(20Q13.33) MUTATED | 43 | 15 | 38 | 2 |
AMP PEAK 22(20Q13.33) WILD-TYPE | 39 | 22 | 76 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 23(21Q21.1) MUTATED | 19 | 7 | 12 | 5 | 16 | 14 | 0 |
AMP PEAK 23(21Q21.1) WILD-TYPE | 7 | 51 | 31 | 46 | 18 | 30 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 24(XP21.2) MUTATED | 14 | 7 | 20 | 9 | 27 | 20 | 0 |
AMP PEAK 24(XP21.2) WILD-TYPE | 12 | 51 | 23 | 42 | 7 | 24 | 1 |
P value = 0.00027 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 24(XP21.2) MUTATED | 26 | 10 | 23 | 7 | 2 | 19 | 3 |
AMP PEAK 24(XP21.2) WILD-TYPE | 16 | 31 | 34 | 25 | 16 | 24 | 2 |
P value = 0.00013 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
AMP PEAK 25(XQ21.1) MUTATED | 10 | 3 | 16 | 5 | 5 | 7 | 0 |
AMP PEAK 25(XQ21.1) WILD-TYPE | 16 | 55 | 27 | 46 | 29 | 37 | 1 |
P value = 0.00051 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
AMP PEAK 25(XQ21.1) MUTATED | 15 | 4 | 4 | 6 | 1 | 11 | 3 |
AMP PEAK 25(XQ21.1) WILD-TYPE | 27 | 37 | 53 | 26 | 17 | 32 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 1(1P36.32) MUTATED | 7 | 3 | 5 | 30 | 12 | 11 | 1 |
DEL PEAK 1(1P36.32) WILD-TYPE | 19 | 55 | 38 | 21 | 22 | 33 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 1(1P36.32) MUTATED | 8 | 1 | 36 | 8 | 6 | 5 | 3 |
DEL PEAK 1(1P36.32) WILD-TYPE | 34 | 40 | 21 | 24 | 12 | 38 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 1(1P36.32) MUTATED | 9 | 44 | 7 | 8 |
DEL PEAK 1(1P36.32) WILD-TYPE | 59 | 32 | 56 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 1(1P36.32) MUTATED | 8 | 1 | 30 | 3 | 6 | 15 | 5 |
DEL PEAK 1(1P36.32) WILD-TYPE | 39 | 21 | 19 | 25 | 53 | 14 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 1(1P36.32) MUTATED | 14 | 6 | 49 |
DEL PEAK 1(1P36.32) WILD-TYPE | 95 | 41 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 1(1P36.32) MUTATED | 11 | 3 | 51 | 4 |
DEL PEAK 1(1P36.32) WILD-TYPE | 71 | 34 | 63 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 1(1P36.32) MUTATED | 14 | 31 | 4 |
DEL PEAK 1(1P36.32) WILD-TYPE | 71 | 33 | 41 |
P value = 0.00021 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 1(1P36.32) MUTATED | 4 | 5 | 18 | 4 | 8 | 2 | 3 | 5 |
DEL PEAK 1(1P36.32) WILD-TYPE | 20 | 27 | 19 | 19 | 4 | 21 | 18 | 17 |
P value = 5e-05 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 2(1Q44) MUTATED | 9 | 5 | 18 | 12 | 16 | 20 | 0 |
DEL PEAK 2(1Q44) WILD-TYPE | 17 | 53 | 25 | 39 | 18 | 24 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 2(1Q44) MUTATED | 23 | 10 | 10 | 3 | 2 | 22 | 2 |
DEL PEAK 2(1Q44) WILD-TYPE | 19 | 31 | 47 | 29 | 16 | 21 | 3 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 2(1Q44) MUTATED | 32 | 13 | 27 | 8 |
DEL PEAK 2(1Q44) WILD-TYPE | 36 | 63 | 36 | 38 |
P value = 6e-05 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 2(1Q44) MUTATED | 27 | 6 | 10 | 8 | 24 | 3 | 2 |
DEL PEAK 2(1Q44) WILD-TYPE | 20 | 16 | 39 | 20 | 35 | 26 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 3(2P25.3) MUTATED | 16 | 5 | 9 | 20 | 21 | 23 | 0 |
DEL PEAK 3(2P25.3) WILD-TYPE | 10 | 53 | 34 | 31 | 13 | 21 | 1 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 3(2P25.3) MUTATED | 18 | 7 | 33 | 3 | 6 | 15 | 3 |
DEL PEAK 3(2P25.3) WILD-TYPE | 24 | 34 | 24 | 29 | 12 | 28 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 3(2P25.3) MUTATED | 26 | 42 | 21 | 4 |
DEL PEAK 3(2P25.3) WILD-TYPE | 42 | 34 | 42 | 42 |
P value = 0.00033 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 3(2P25.3) MUTATED | 25 | 20 | 48 |
DEL PEAK 3(2P25.3) WILD-TYPE | 84 | 27 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 3(2P25.3) MUTATED | 27 | 10 | 56 | 0 |
DEL PEAK 3(2P25.3) WILD-TYPE | 55 | 27 | 58 | 22 |
P value = 0.00021 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 3(2P25.3) MUTATED | 19 | 35 | 19 |
DEL PEAK 3(2P25.3) WILD-TYPE | 66 | 29 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 4(2Q37.3) MUTATED | 16 | 8 | 12 | 10 | 22 | 39 | 1 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 10 | 50 | 31 | 41 | 12 | 5 | 0 |
P value = 0.00039 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 4(2Q37.3) MUTATED | 27 | 6 | 16 | 9 | 27 | 19 | 2 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 20 | 16 | 33 | 19 | 32 | 10 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 5(2Q37.3) MUTATED | 16 | 7 | 14 | 11 | 22 | 39 | 1 |
DEL PEAK 5(2Q37.3) WILD-TYPE | 10 | 51 | 29 | 40 | 12 | 5 | 0 |
P value = 5e-04 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 5(2Q37.3) MUTATED | 29 | 6 | 16 | 9 | 26 | 19 | 3 |
DEL PEAK 5(2Q37.3) WILD-TYPE | 18 | 16 | 33 | 19 | 33 | 10 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 6(3P21.31) MUTATED | 21 | 5 | 2 | 10 | 2 | 13 | 1 |
DEL PEAK 6(3P21.31) WILD-TYPE | 21 | 36 | 55 | 22 | 16 | 30 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 6(3P21.31) MUTATED | 28 | 4 | 15 | 18 |
DEL PEAK 6(3P21.31) WILD-TYPE | 40 | 72 | 48 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 6(3P21.31) MUTATED | 23 | 5 | 2 | 9 | 13 | 3 | 10 |
DEL PEAK 6(3P21.31) WILD-TYPE | 24 | 17 | 47 | 19 | 46 | 26 | 9 |
P value = 0.00017 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 6(3P21.31) MUTATED | 39 | 14 | 12 |
DEL PEAK 6(3P21.31) WILD-TYPE | 70 | 33 | 87 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 6(3P21.31) MUTATED | 12 | 14 | 0 | 8 | 2 | 4 | 5 | 10 |
DEL PEAK 6(3P21.31) WILD-TYPE | 12 | 18 | 37 | 15 | 10 | 19 | 16 | 12 |
P value = 0.00067 (Fisher's exact test), Q value = 0.24
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 8(3Q29) MUTATED | 4 | 4 | 19 | 8 | 8 | 11 | 0 |
DEL PEAK 8(3Q29) WILD-TYPE | 22 | 54 | 24 | 43 | 26 | 33 | 1 |
P value = 0.00022 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 8(3Q29) MUTATED | 14 | 3 | 10 | 5 | 0 | 12 | 4 |
DEL PEAK 8(3Q29) WILD-TYPE | 28 | 38 | 47 | 27 | 18 | 31 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 9(4Q35.1) MUTATED | 16 | 10 | 13 | 11 | 19 | 24 | 1 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 10 | 48 | 30 | 40 | 15 | 20 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 11(6P25.3) MUTATED | 4 | 6 | 10 | 27 | 18 | 16 | 0 |
DEL PEAK 11(6P25.3) WILD-TYPE | 22 | 52 | 33 | 24 | 16 | 28 | 1 |
P value = 0.00059 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 11(6P25.3) MUTATED | 10 | 7 | 31 | 6 | 4 | 17 | 2 |
DEL PEAK 11(6P25.3) WILD-TYPE | 32 | 34 | 26 | 26 | 14 | 26 | 3 |
P value = 0.00014 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 11(6P25.3) MUTATED | 12 | 37 | 21 | 8 |
DEL PEAK 11(6P25.3) WILD-TYPE | 56 | 39 | 42 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 13(7Q36.3) MUTATED | 9 | 5 | 11 | 11 | 9 | 26 | 0 |
DEL PEAK 13(7Q36.3) WILD-TYPE | 17 | 53 | 32 | 40 | 25 | 18 | 1 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 14(8P23.3) MUTATED | 5 | 8 | 23 | 10 | 14 | 21 | 0 |
DEL PEAK 14(8P23.3) WILD-TYPE | 21 | 50 | 20 | 41 | 20 | 23 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 14(8P23.3) MUTATED | 22 | 6 | 6 | 10 | 2 | 23 | 3 |
DEL PEAK 14(8P23.3) WILD-TYPE | 20 | 35 | 51 | 22 | 16 | 20 | 2 |
P value = 0.00059 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 14(8P23.3) MUTATED | 30 | 12 | 26 | 12 |
DEL PEAK 14(8P23.3) WILD-TYPE | 38 | 64 | 37 | 34 |
P value = 7e-05 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 16(9P21.3) MUTATED | 41 | 19 | 32 |
DEL PEAK 16(9P21.3) WILD-TYPE | 44 | 45 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 17(9Q34.3) MUTATED | 8 | 3 | 7 | 10 | 15 | 17 | 1 |
DEL PEAK 17(9Q34.3) WILD-TYPE | 18 | 55 | 36 | 41 | 19 | 27 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 18(10P15.3) MUTATED | 14 | 10 | 20 | 34 | 25 | 25 | 0 |
DEL PEAK 18(10P15.3) WILD-TYPE | 12 | 48 | 23 | 17 | 9 | 19 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 18(10P15.3) MUTATED | 28 | 9 | 38 | 14 | 4 | 23 | 3 |
DEL PEAK 18(10P15.3) WILD-TYPE | 14 | 32 | 19 | 18 | 14 | 20 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 19(10Q23.31) MUTATED | 16 | 8 | 12 | 42 | 26 | 33 | 1 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 10 | 50 | 31 | 9 | 8 | 11 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 19(10Q23.31) MUTATED | 26 | 6 | 50 | 8 | 6 | 29 | 4 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 16 | 35 | 7 | 24 | 12 | 14 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 19(10Q23.31) MUTATED | 29 | 60 | 36 | 12 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 39 | 16 | 27 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 19(10Q23.31) MUTATED | 25 | 7 | 46 | 7 | 33 | 15 | 4 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 22 | 15 | 3 | 21 | 26 | 14 | 15 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 19(10Q23.31) MUTATED | 42 | 26 | 69 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 67 | 21 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 19(10Q23.31) MUTATED | 38 | 14 | 81 | 4 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 44 | 23 | 33 | 18 |
P value = 0.00042 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 19(10Q23.31) MUTATED | 35 | 47 | 24 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 50 | 17 | 21 |
P value = 0.00041 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 19(10Q23.31) MUTATED | 15 | 12 | 30 | 13 | 8 | 14 | 9 | 5 |
DEL PEAK 19(10Q23.31) WILD-TYPE | 9 | 20 | 7 | 10 | 4 | 9 | 12 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 20(10Q26.3) MUTATED | 14 | 8 | 11 | 42 | 24 | 32 | 1 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 12 | 50 | 32 | 9 | 10 | 12 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 20(10Q26.3) MUTATED | 23 | 7 | 47 | 6 | 7 | 31 | 4 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 19 | 34 | 10 | 26 | 11 | 12 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 20(10Q26.3) MUTATED | 24 | 56 | 39 | 11 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 44 | 20 | 24 | 35 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 20(10Q26.3) MUTATED | 21 | 7 | 41 | 6 | 35 | 16 | 4 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 26 | 15 | 8 | 22 | 24 | 13 | 15 |
P value = 0.00014 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 20(10Q26.3) MUTATED | 39 | 27 | 64 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 70 | 20 | 35 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 20(10Q26.3) MUTATED | 37 | 14 | 76 | 3 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 45 | 23 | 38 | 19 |
P value = 8e-05 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 20(10Q26.3) MUTATED | 32 | 47 | 24 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 53 | 17 | 21 |
P value = 0.00029 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 20(10Q26.3) MUTATED | 14 | 10 | 29 | 12 | 9 | 14 | 10 | 5 |
DEL PEAK 20(10Q26.3) WILD-TYPE | 10 | 22 | 8 | 11 | 3 | 9 | 11 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 21(11P15.5) MUTATED | 14 | 3 | 27 | 21 | 20 | 25 | 0 |
DEL PEAK 21(11P15.5) WILD-TYPE | 12 | 55 | 16 | 30 | 14 | 19 | 1 |
P value = 0.00054 (Fisher's exact test), Q value = 0.19
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 21(11P15.5) MUTATED | 25 | 9 | 29 | 9 | 3 | 21 | 3 |
DEL PEAK 21(11P15.5) WILD-TYPE | 17 | 32 | 28 | 23 | 15 | 22 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 22(11Q24.2) MUTATED | 12 | 8 | 32 | 16 | 20 | 35 | 0 |
DEL PEAK 22(11Q24.2) WILD-TYPE | 14 | 50 | 11 | 35 | 14 | 9 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 22(11Q24.2) MUTATED | 35 | 12 | 23 | 10 | 2 | 27 | 4 |
DEL PEAK 22(11Q24.2) WILD-TYPE | 7 | 29 | 34 | 22 | 16 | 16 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 23(12P13.1) MUTATED | 17 | 9 | 18 | 6 | 17 | 20 | 0 |
DEL PEAK 23(12P13.1) WILD-TYPE | 9 | 49 | 25 | 45 | 17 | 24 | 1 |
P value = 9e-05 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 24(12Q12) MUTATED | 9 | 3 | 7 | 9 | 14 | 13 | 1 |
DEL PEAK 24(12Q12) WILD-TYPE | 17 | 55 | 36 | 42 | 20 | 31 | 0 |
P value = 8e-05 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 25(12Q24.33) MUTATED | 14 | 7 | 10 | 8 | 15 | 14 | 1 |
DEL PEAK 25(12Q24.33) WILD-TYPE | 12 | 51 | 33 | 43 | 19 | 30 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 26(13Q14.2) MUTATED | 21 | 13 | 27 | 47 | 31 | 40 | 1 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 5 | 45 | 16 | 4 | 3 | 4 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 26(13Q14.2) MUTATED | 34 | 18 | 55 | 12 | 9 | 34 | 5 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 8 | 23 | 2 | 20 | 9 | 9 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 26(13Q14.2) MUTATED | 41 | 68 | 50 | 19 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 27 | 8 | 13 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 26(13Q14.2) MUTATED | 34 | 11 | 47 | 13 | 44 | 22 | 7 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 13 | 11 | 2 | 15 | 15 | 7 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 26(13Q14.2) MUTATED | 61 | 32 | 85 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 48 | 15 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 26(13Q14.2) MUTATED | 54 | 20 | 97 | 7 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 28 | 17 | 17 | 15 |
P value = 0.00024 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 26(13Q14.2) MUTATED | 50 | 56 | 35 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 35 | 8 | 10 |
P value = 0.00022 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 26(13Q14.2) MUTATED | 17 | 21 | 36 | 19 | 8 | 16 | 15 | 9 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 7 | 11 | 1 | 4 | 4 | 7 | 6 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 27(14Q24.1) MUTATED | 7 | 4 | 19 | 18 | 5 | 26 | 1 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 19 | 54 | 24 | 33 | 29 | 18 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 27(14Q24.1) MUTATED | 21 | 5 | 9 | 9 | 13 | 21 | 2 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 26 | 17 | 40 | 19 | 46 | 8 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 28(16Q11.2) MUTATED | 14 | 10 | 18 | 33 | 28 | 26 | 1 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 12 | 48 | 25 | 18 | 6 | 18 | 0 |
P value = 7e-05 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 28(16Q11.2) MUTATED | 23 | 11 | 40 | 9 | 9 | 28 | 2 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 19 | 30 | 17 | 23 | 9 | 15 | 3 |
P value = 0.00027 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 28(16Q11.2) MUTATED | 28 | 50 | 37 | 14 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 40 | 26 | 26 | 32 |
P value = 0.00068 (Fisher's exact test), Q value = 0.24
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 28(16Q11.2) MUTATED | 24 | 8 | 34 | 7 | 34 | 17 | 5 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 23 | 14 | 15 | 21 | 25 | 12 | 14 |
P value = 3e-04 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 28(16Q11.2) MUTATED | 38 | 11 | 73 | 7 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 44 | 26 | 41 | 15 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 28(16Q11.2) MUTATED | 31 | 47 | 29 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 54 | 17 | 16 |
P value = 4e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 28(16Q11.2) MUTATED | 12 | 10 | 31 | 14 | 8 | 13 | 14 | 5 |
DEL PEAK 28(16Q11.2) WILD-TYPE | 12 | 22 | 6 | 9 | 4 | 10 | 7 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 29(16Q23.1) MUTATED | 14 | 11 | 19 | 33 | 27 | 29 | 1 |
DEL PEAK 29(16Q23.1) WILD-TYPE | 12 | 47 | 24 | 18 | 7 | 15 | 0 |
P value = 0.00044 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 29(16Q23.1) MUTATED | 26 | 13 | 40 | 10 | 9 | 27 | 2 |
DEL PEAK 29(16Q23.1) WILD-TYPE | 16 | 28 | 17 | 22 | 9 | 16 | 3 |
P value = 0.00014 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 29(16Q23.1) MUTATED | 40 | 12 | 75 | 6 |
DEL PEAK 29(16Q23.1) WILD-TYPE | 42 | 25 | 39 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 29(16Q23.1) MUTATED | 31 | 47 | 31 |
DEL PEAK 29(16Q23.1) WILD-TYPE | 54 | 17 | 14 |
P value = 7e-05 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 29(16Q23.1) MUTATED | 14 | 10 | 30 | 15 | 9 | 10 | 15 | 6 |
DEL PEAK 29(16Q23.1) WILD-TYPE | 10 | 22 | 7 | 8 | 3 | 13 | 6 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 30(17P13.1) MUTATED | 9 | 9 | 13 | 45 | 23 | 29 | 1 |
DEL PEAK 30(17P13.1) WILD-TYPE | 17 | 49 | 30 | 6 | 11 | 15 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 30(17P13.1) MUTATED | 15 | 13 | 46 | 12 | 8 | 22 | 2 |
DEL PEAK 30(17P13.1) WILD-TYPE | 27 | 28 | 11 | 20 | 10 | 21 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 30(17P13.1) MUTATED | 23 | 54 | 35 | 15 |
DEL PEAK 30(17P13.1) WILD-TYPE | 45 | 22 | 28 | 31 |
P value = 4e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 30(17P13.1) MUTATED | 18 | 9 | 40 | 7 | 29 | 14 | 10 |
DEL PEAK 30(17P13.1) WILD-TYPE | 29 | 13 | 9 | 21 | 30 | 15 | 9 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 30(17P13.1) MUTATED | 37 | 26 | 64 |
DEL PEAK 30(17P13.1) WILD-TYPE | 72 | 21 | 35 |
P value = 4e-05 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 30(17P13.1) MUTATED | 30 | 16 | 75 | 6 |
DEL PEAK 30(17P13.1) WILD-TYPE | 52 | 21 | 39 | 16 |
P value = 3e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 64 | 45 |
DEL PEAK 30(17P13.1) MUTATED | 27 | 44 | 29 |
DEL PEAK 30(17P13.1) WILD-TYPE | 58 | 20 | 16 |
P value = 1e-04 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 31(17Q11.2) MUTATED | 13 | 7 | 19 | 10 | 15 | 17 | 0 |
DEL PEAK 31(17Q11.2) WILD-TYPE | 13 | 51 | 24 | 41 | 19 | 27 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 31(17Q11.2) MUTATED | 22 | 8 | 9 | 9 | 0 | 23 | 2 |
DEL PEAK 31(17Q11.2) WILD-TYPE | 20 | 33 | 48 | 23 | 18 | 20 | 3 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 31(17Q11.2) MUTATED | 30 | 10 | 29 | 12 |
DEL PEAK 31(17Q11.2) WILD-TYPE | 38 | 66 | 34 | 34 |
P value = 0.00013 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 31(17Q11.2) MUTATED | 24 | 7 | 7 | 7 | 26 | 3 | 7 |
DEL PEAK 31(17Q11.2) WILD-TYPE | 23 | 15 | 42 | 21 | 33 | 26 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 32(17Q25.3) MUTATED | 13 | 5 | 13 | 6 | 17 | 12 | 1 |
DEL PEAK 32(17Q25.3) WILD-TYPE | 13 | 53 | 30 | 45 | 17 | 32 | 0 |
P value = 0.00017 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 33(18Q23) MUTATED | 14 | 13 | 14 | 6 | 3 | 28 | 1 |
DEL PEAK 33(18Q23) WILD-TYPE | 28 | 28 | 43 | 26 | 15 | 15 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 33(18Q23) MUTATED | 21 | 17 | 37 | 10 |
DEL PEAK 33(18Q23) WILD-TYPE | 47 | 59 | 26 | 36 |
P value = 0.00035 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 24 | 32 | 37 | 23 | 12 | 23 | 21 | 22 |
DEL PEAK 33(18Q23) MUTATED | 6 | 8 | 9 | 11 | 2 | 14 | 15 | 5 |
DEL PEAK 33(18Q23) WILD-TYPE | 18 | 24 | 28 | 12 | 10 | 9 | 6 | 17 |
P value = 9e-05 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 34(19P13.3) MUTATED | 9 | 5 | 8 | 16 | 17 | 14 | 1 |
DEL PEAK 34(19P13.3) WILD-TYPE | 17 | 53 | 35 | 35 | 17 | 30 | 0 |
P value = 1e-04 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 34(19P13.3) MUTATED | 9 | 31 | 23 | 7 |
DEL PEAK 34(19P13.3) WILD-TYPE | 59 | 45 | 40 | 39 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 35(19Q13.43) MUTATED | 12 | 3 | 21 | 30 | 15 | 25 | 0 |
DEL PEAK 35(19Q13.43) WILD-TYPE | 14 | 55 | 22 | 21 | 19 | 19 | 1 |
P value = 0.00038 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 35(19Q13.43) MUTATED | 23 | 6 | 30 | 8 | 7 | 20 | 3 |
DEL PEAK 35(19Q13.43) WILD-TYPE | 19 | 35 | 27 | 24 | 11 | 23 | 2 |
P value = 0.00044 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 36(21Q11.2) MUTATED | 2 | 3 | 7 | 17 | 7 | 15 | 0 |
DEL PEAK 36(21Q11.2) WILD-TYPE | 24 | 55 | 36 | 34 | 27 | 29 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 38(22Q13.32) MUTATED | 9 | 8 | 9 | 9 | 18 | 29 | 1 |
DEL PEAK 38(22Q13.32) WILD-TYPE | 17 | 50 | 34 | 42 | 16 | 15 | 0 |
P value = 0.00043 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 39(XP21.1) MUTATED | 5 | 5 | 6 | 19 | 4 | 15 | 1 |
DEL PEAK 39(XP21.1) WILD-TYPE | 21 | 53 | 37 | 32 | 30 | 29 | 0 |
P value = 0.00061 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 39(XP21.1) MUTATED | 5 | 1 | 19 | 7 | 7 | 10 | 2 |
DEL PEAK 39(XP21.1) WILD-TYPE | 37 | 40 | 38 | 25 | 11 | 33 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 40(XQ21.1) MUTATED | 14 | 5 | 16 | 30 | 23 | 25 | 1 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 12 | 53 | 27 | 21 | 11 | 19 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 40(XQ21.1) MUTATED | 20 | 7 | 41 | 11 | 8 | 15 | 2 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 22 | 34 | 16 | 21 | 10 | 28 | 3 |
P value = 0.00033 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 40(XQ21.1) MUTATED | 25 | 50 | 22 | 16 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 43 | 26 | 41 | 30 |
P value = 0.00017 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 40(XQ21.1) MUTATED | 19 | 6 | 36 | 13 | 19 | 15 | 5 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 28 | 16 | 13 | 15 | 40 | 14 | 14 |
P value = 0.00019 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 40(XQ21.1) MUTATED | 36 | 17 | 60 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 73 | 30 | 39 |
P value = 0.00049 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 40(XQ21.1) MUTATED | 28 | 12 | 67 | 6 |
DEL PEAK 40(XQ21.1) WILD-TYPE | 54 | 25 | 47 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 26 | 58 | 43 | 51 | 34 | 44 | 1 |
DEL PEAK 41(XQ22.3) MUTATED | 14 | 7 | 17 | 31 | 24 | 29 | 1 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 12 | 51 | 26 | 20 | 10 | 15 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 42 | 41 | 57 | 32 | 18 | 43 | 5 |
DEL PEAK 41(XQ22.3) MUTATED | 23 | 7 | 42 | 8 | 9 | 19 | 4 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 19 | 34 | 15 | 24 | 9 | 24 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 68 | 76 | 63 | 46 |
DEL PEAK 41(XQ22.3) MUTATED | 33 | 54 | 22 | 13 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 35 | 22 | 41 | 33 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 47 | 22 | 49 | 28 | 59 | 29 | 19 |
DEL PEAK 41(XQ22.3) MUTATED | 27 | 5 | 35 | 11 | 21 | 19 | 4 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 20 | 17 | 14 | 17 | 38 | 10 | 15 |
P value = 0.00048 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 47 | 99 |
DEL PEAK 41(XQ22.3) MUTATED | 40 | 19 | 62 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 69 | 28 | 37 |
P value = 9e-05 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 82 | 37 | 114 | 22 |
DEL PEAK 41(XQ22.3) MUTATED | 32 | 10 | 72 | 7 |
DEL PEAK 41(XQ22.3) WILD-TYPE | 50 | 27 | 42 | 15 |
-
Copy number data file = transformed.cor.cli.txt
-
Molecular subtype file = SARC-TP.transferedmergedcluster.txt
-
Number of patients = 257
-
Number of significantly focal cnvs = 66
-
Number of molecular subtypes = 8
-
Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.