This pipeline computes the correlation between significantly recurrent gene mutations and molecular subtypes.
Testing the association between mutation status of 27 genes and 10 molecular subtypes across 221 patients, 38 significant findings detected with P value < 0.05 and Q value < 0.25.
-
TP53 mutation correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
-
PIK3CA mutation correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
CBWD1 mutation correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
ARID1A mutation correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
PGM5 mutation correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
APC mutation correlated to 'RPPA_CHIERARCHICAL'.
-
FBXW7 mutation correlated to 'MRNASEQ_CHIERARCHICAL' and 'MIRSEQ_CHIERARCHICAL'.
-
HLA-B mutation correlated to 'METHLYATION_CNMF'.
-
CIC mutation correlated to 'MIRSEQ_CHIERARCHICAL'.
-
ZBTB20 mutation correlated to 'METHLYATION_CNMF' and 'MIRSEQ_CHIERARCHICAL'.
-
MVK mutation correlated to 'RPPA_CHIERARCHICAL'.
-
CR1 mutation correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
-
MLL4 mutation correlated to 'METHLYATION_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nMutated (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
CBWD1 | 28 (13%) | 193 |
5e-05 (0.0128) |
1e-05 (0.00265) |
9e-05 (0.0226) |
0.0218 (1.00) |
8e-05 (0.0202) |
1e-05 (0.00265) |
0.00022 (0.0543) |
1e-05 (0.00265) |
0.16 (1.00) |
0.135 (1.00) |
TP53 | 99 (45%) | 122 |
1e-05 (0.00265) |
0.0001 (0.025) |
0.21 (1.00) |
0.554 (1.00) |
0.00023 (0.0566) |
0.00029 (0.0708) |
0.00122 (0.277) |
5e-05 (0.0128) |
0.935 (1.00) |
0.00316 (0.679) |
PIK3CA | 48 (22%) | 173 |
0.00087 (0.203) |
0.00042 (0.101) |
0.0155 (1.00) |
0.0705 (1.00) |
0.00091 (0.211) |
1e-05 (0.00265) |
0.0568 (1.00) |
0.0166 (1.00) |
0.00642 (1.00) |
0.375 (1.00) |
ARID1A | 41 (19%) | 180 |
1e-05 (0.00265) |
0.0381 (1.00) |
0.0175 (1.00) |
0.00094 (0.217) |
0.00067 (0.157) |
2e-05 (0.00516) |
0.00222 (0.488) |
0.00285 (0.621) |
0.813 (1.00) |
0.225 (1.00) |
PGM5 | 22 (10%) | 199 |
0.00096 (0.221) |
0.00015 (0.0373) |
0.184 (1.00) |
0.023 (1.00) |
0.00057 (0.135) |
0.00322 (0.689) |
0.00918 (1.00) |
1e-05 (0.00265) |
0.198 (1.00) |
0.19 (1.00) |
CR1 | 20 (9%) | 201 |
0.0589 (1.00) |
8e-05 (0.0202) |
0.0974 (1.00) |
0.104 (1.00) |
0.00052 (0.124) |
3e-05 (0.00771) |
0.00078 (0.183) |
0.0191 (1.00) |
0.371 (1.00) |
0.704 (1.00) |
FBXW7 | 19 (9%) | 202 |
0.0589 (1.00) |
0.0104 (1.00) |
0.00177 (0.398) |
0.014 (1.00) |
0.0145 (1.00) |
7e-05 (0.0178) |
0.0112 (1.00) |
0.00041 (0.0988) |
0.106 (1.00) |
0.0178 (1.00) |
ZBTB20 | 16 (7%) | 205 |
0.0196 (1.00) |
0.00101 (0.231) |
0.149 (1.00) |
0.168 (1.00) |
0.0437 (1.00) |
0.00418 (0.878) |
0.00203 (0.451) |
0.00047 (0.112) |
0.218 (1.00) |
0.134 (1.00) |
MLL4 | 20 (9%) | 201 |
0.0358 (1.00) |
0.00021 (0.0521) |
0.442 (1.00) |
0.0434 (1.00) |
0.0926 (1.00) |
0.00031 (0.0753) |
0.0315 (1.00) |
0.00437 (0.911) |
0.825 (1.00) |
0.131 (1.00) |
APC | 33 (15%) | 188 |
0.497 (1.00) |
0.0228 (1.00) |
0.076 (1.00) |
0.00052 (0.124) |
0.23 (1.00) |
0.0034 (0.721) |
0.00657 (1.00) |
0.00182 (0.406) |
0.403 (1.00) |
0.183 (1.00) |
HLA-B | 12 (5%) | 209 |
0.0782 (1.00) |
0.00032 (0.0774) |
0.00499 (1.00) |
0.00178 (0.399) |
0.0209 (1.00) |
0.0408 (1.00) |
0.0249 (1.00) |
0.0553 (1.00) |
0.756 (1.00) |
0.864 (1.00) |
CIC | 14 (6%) | 207 |
0.0211 (1.00) |
0.00589 (1.00) |
0.0321 (1.00) |
0.0132 (1.00) |
0.664 (1.00) |
0.00505 (1.00) |
0.0104 (1.00) |
0.00023 (0.0566) |
1 (1.00) |
0.0517 (1.00) |
MVK | 8 (4%) | 213 |
0.255 (1.00) |
0.0395 (1.00) |
0.0431 (1.00) |
0.00106 (0.242) |
0.553 (1.00) |
0.173 (1.00) |
0.0829 (1.00) |
0.00128 (0.289) |
1 (1.00) |
0.306 (1.00) |
KRAS | 25 (11%) | 196 |
0.0376 (1.00) |
0.699 (1.00) |
0.56 (1.00) |
0.073 (1.00) |
0.238 (1.00) |
0.0523 (1.00) |
0.367 (1.00) |
0.0471 (1.00) |
0.153 (1.00) |
0.726 (1.00) |
RHOA | 13 (6%) | 208 |
0.0765 (1.00) |
0.385 (1.00) |
0.872 (1.00) |
0.713 (1.00) |
0.542 (1.00) |
0.799 (1.00) |
0.00279 (0.611) |
0.211 (1.00) |
0.136 (1.00) |
0.0815 (1.00) |
SMAD4 | 19 (9%) | 202 |
0.17 (1.00) |
1 (1.00) |
0.0659 (1.00) |
0.332 (1.00) |
0.00214 (0.473) |
0.261 (1.00) |
0.249 (1.00) |
0.497 (1.00) |
0.0956 (1.00) |
0.13 (1.00) |
IRF2 | 14 (6%) | 207 |
0.466 (1.00) |
0.23 (1.00) |
0.0735 (1.00) |
0.35 (1.00) |
0.31 (1.00) |
0.63 (1.00) |
0.0336 (1.00) |
0.0217 (1.00) |
0.614 (1.00) |
0.87 (1.00) |
LARP4B | 12 (5%) | 209 |
0.0974 (1.00) |
0.0495 (1.00) |
0.00322 (0.689) |
0.0232 (1.00) |
0.153 (1.00) |
0.0834 (1.00) |
0.175 (1.00) |
0.0148 (1.00) |
0.333 (1.00) |
0.137 (1.00) |
CDH1 | 18 (8%) | 203 |
0.0316 (1.00) |
0.338 (1.00) |
0.613 (1.00) |
0.879 (1.00) |
0.126 (1.00) |
0.0492 (1.00) |
0.186 (1.00) |
0.004 (0.844) |
0.12 (1.00) |
0.545 (1.00) |
BCOR | 16 (7%) | 205 |
0.0029 (0.629) |
0.0508 (1.00) |
0.171 (1.00) |
0.0143 (1.00) |
0.0193 (1.00) |
0.00596 (1.00) |
0.00846 (1.00) |
0.114 (1.00) |
0.791 (1.00) |
1 (1.00) |
C13ORF33 | 6 (3%) | 215 |
0.19 (1.00) |
0.00436 (0.911) |
0.0154 (1.00) |
0.277 (1.00) |
0.123 (1.00) |
0.00291 (0.629) |
1 (1.00) |
0.203 (1.00) |
0.115 (1.00) |
0.217 (1.00) |
ACVR1B | 10 (5%) | 211 |
0.0637 (1.00) |
0.297 (1.00) |
0.666 (1.00) |
0.157 (1.00) |
0.00535 (1.00) |
0.359 (1.00) |
0.0809 (1.00) |
0.00876 (1.00) |
0.479 (1.00) |
0.199 (1.00) |
ERBB2 | 11 (5%) | 210 |
0.892 (1.00) |
0.433 (1.00) |
0.264 (1.00) |
0.674 (1.00) |
0.762 (1.00) |
0.65 (1.00) |
0.255 (1.00) |
0.436 (1.00) |
0.828 (1.00) |
0.869 (1.00) |
C1R | 3 (1%) | 218 |
0.556 (1.00) |
0.213 (1.00) |
0.0408 (1.00) |
0.305 (1.00) |
0.225 (1.00) |
|||||
CTNND1 | 13 (6%) | 208 |
0.026 (1.00) |
0.0633 (1.00) |
0.284 (1.00) |
0.103 (1.00) |
0.0268 (1.00) |
0.531 (1.00) |
0.0906 (1.00) |
0.0585 (1.00) |
0.373 (1.00) |
0.178 (1.00) |
MLXIPL | 13 (6%) | 208 |
0.391 (1.00) |
0.346 (1.00) |
0.0306 (1.00) |
0.0123 (1.00) |
0.0757 (1.00) |
0.316 (1.00) |
0.0174 (1.00) |
0.109 (1.00) |
0.894 (1.00) |
0.618 (1.00) |
NLK | 5 (2%) | 216 |
0.758 (1.00) |
0.314 (1.00) |
0.165 (1.00) |
0.242 (1.00) |
0.414 (1.00) |
0.812 (1.00) |
0.218 (1.00) |
0.456 (1.00) |
0.513 (1.00) |
0.454 (1.00) |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
TP53 MUTATED | 41 | 21 | 14 | 18 | 4 |
TP53 WILD-TYPE | 16 | 76 | 8 | 17 | 5 |
P value = 1e-04 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
TP53 MUTATED | 28 | 35 | 19 |
TP53 WILD-TYPE | 40 | 14 | 40 |
P value = 0.21 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
TP53 MUTATED | 33 | 25 | 30 |
TP53 WILD-TYPE | 30 | 43 | 37 |
P value = 0.554 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
TP53 MUTATED | 15 | 26 | 20 | 27 |
TP53 WILD-TYPE | 14 | 33 | 20 | 43 |
P value = 0.00023 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
TP53 MUTATED | 14 | 12 | 12 | 17 | 30 |
TP53 WILD-TYPE | 34 | 31 | 19 | 13 | 14 |
P value = 0.00029 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
TP53 MUTATED | 15 | 1 | 9 | 16 | 21 | 18 | 5 |
TP53 WILD-TYPE | 17 | 14 | 25 | 24 | 11 | 10 | 10 |
P value = 0.00122 (Fisher's exact test), Q value = 0.28
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
TP53 MUTATED | 43 | 26 | 30 |
TP53 WILD-TYPE | 59 | 49 | 14 |
P value = 5e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
TP53 MUTATED | 21 | 26 | 16 | 36 |
TP53 WILD-TYPE | 20 | 57 | 29 | 16 |
P value = 0.935 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
TP53 MUTATED | 12 | 4 | 27 | 14 | 7 | 12 |
TP53 WILD-TYPE | 9 | 4 | 30 | 14 | 7 | 17 |
P value = 0.00316 (Fisher's exact test), Q value = 0.68
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
TP53 MUTATED | 51 | 10 | 15 |
TP53 WILD-TYPE | 48 | 27 | 6 |
P value = 0.00087 (Fisher's exact test), Q value = 0.2
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
PIK3CA MUTATED | 3 | 31 | 5 | 6 | 3 |
PIK3CA WILD-TYPE | 54 | 66 | 17 | 29 | 6 |
P value = 0.00042 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
PIK3CA MUTATED | 27 | 5 | 10 |
PIK3CA WILD-TYPE | 41 | 44 | 49 |
P value = 0.0155 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
PIK3CA MUTATED | 20 | 8 | 17 |
PIK3CA WILD-TYPE | 43 | 60 | 50 |
P value = 0.0705 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
PIK3CA MUTATED | 10 | 11 | 13 | 11 |
PIK3CA WILD-TYPE | 19 | 48 | 27 | 59 |
P value = 0.00091 (Fisher's exact test), Q value = 0.21
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
PIK3CA MUTATED | 20 | 8 | 3 | 9 | 4 |
PIK3CA WILD-TYPE | 28 | 35 | 28 | 21 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
PIK3CA MUTATED | 4 | 12 | 3 | 10 | 7 | 1 | 7 |
PIK3CA WILD-TYPE | 28 | 3 | 31 | 30 | 25 | 27 | 8 |
P value = 0.0568 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
PIK3CA MUTATED | 29 | 14 | 5 |
PIK3CA WILD-TYPE | 73 | 61 | 39 |
P value = 0.0166 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
PIK3CA MUTATED | 12 | 23 | 9 | 4 |
PIK3CA WILD-TYPE | 29 | 60 | 36 | 48 |
P value = 0.00642 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
PIK3CA MUTATED | 2 | 2 | 21 | 7 | 0 | 3 |
PIK3CA WILD-TYPE | 19 | 6 | 36 | 21 | 14 | 26 |
P value = 0.375 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
PIK3CA MUTATED | 25 | 5 | 5 |
PIK3CA WILD-TYPE | 74 | 32 | 16 |
P value = 5e-05 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
CBWD1 MUTATED | 0 | 23 | 1 | 3 | 1 |
CBWD1 WILD-TYPE | 57 | 74 | 21 | 32 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
CBWD1 MUTATED | 21 | 0 | 1 |
CBWD1 WILD-TYPE | 47 | 49 | 58 |
P value = 9e-05 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
CBWD1 MUTATED | 18 | 2 | 7 |
CBWD1 WILD-TYPE | 45 | 66 | 60 |
P value = 0.0218 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
CBWD1 MUTATED | 7 | 7 | 9 | 4 |
CBWD1 WILD-TYPE | 22 | 52 | 31 | 66 |
P value = 8e-05 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
CBWD1 MUTATED | 15 | 4 | 3 | 2 | 0 |
CBWD1 WILD-TYPE | 33 | 39 | 28 | 28 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
CBWD1 MUTATED | 5 | 0 | 1 | 6 | 3 | 0 | 9 |
CBWD1 WILD-TYPE | 27 | 15 | 33 | 34 | 29 | 28 | 6 |
P value = 0.00022 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
CBWD1 MUTATED | 23 | 4 | 1 |
CBWD1 WILD-TYPE | 79 | 71 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
CBWD1 MUTATED | 15 | 9 | 2 | 2 |
CBWD1 WILD-TYPE | 26 | 74 | 43 | 50 |
P value = 0.16 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
CBWD1 MUTATED | 2 | 2 | 7 | 7 | 0 | 2 |
CBWD1 WILD-TYPE | 19 | 6 | 50 | 21 | 14 | 27 |
P value = 0.135 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
CBWD1 MUTATED | 13 | 2 | 5 |
CBWD1 WILD-TYPE | 86 | 35 | 16 |
P value = 0.0376 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
KRAS MUTATED | 2 | 15 | 2 | 3 | 3 |
KRAS WILD-TYPE | 55 | 82 | 20 | 32 | 6 |
P value = 0.699 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
KRAS MUTATED | 9 | 4 | 5 |
KRAS WILD-TYPE | 59 | 45 | 54 |
P value = 0.56 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
KRAS MUTATED | 10 | 7 | 7 |
KRAS WILD-TYPE | 53 | 61 | 60 |
P value = 0.073 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
KRAS MUTATED | 4 | 3 | 9 | 8 |
KRAS WILD-TYPE | 25 | 56 | 31 | 62 |
P value = 0.238 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
KRAS MUTATED | 9 | 4 | 2 | 4 | 2 |
KRAS WILD-TYPE | 39 | 39 | 29 | 26 | 42 |
P value = 0.0523 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
KRAS MUTATED | 6 | 0 | 1 | 4 | 5 | 1 | 4 |
KRAS WILD-TYPE | 26 | 15 | 33 | 36 | 27 | 27 | 11 |
P value = 0.367 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
KRAS MUTATED | 15 | 7 | 3 |
KRAS WILD-TYPE | 87 | 68 | 41 |
P value = 0.0471 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
KRAS MUTATED | 10 | 6 | 5 | 4 |
KRAS WILD-TYPE | 31 | 77 | 40 | 48 |
P value = 0.153 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
KRAS MUTATED | 4 | 1 | 3 | 1 | 3 | 3 |
KRAS WILD-TYPE | 17 | 7 | 54 | 27 | 11 | 26 |
P value = 0.726 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
KRAS MUTATED | 9 | 3 | 3 |
KRAS WILD-TYPE | 90 | 34 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
ARID1A MUTATED | 0 | 33 | 2 | 6 | 0 |
ARID1A WILD-TYPE | 57 | 64 | 20 | 29 | 9 |
P value = 0.0381 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
ARID1A MUTATED | 18 | 5 | 7 |
ARID1A WILD-TYPE | 50 | 44 | 52 |
P value = 0.0175 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
ARID1A MUTATED | 19 | 7 | 13 |
ARID1A WILD-TYPE | 44 | 61 | 54 |
P value = 0.00094 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
ARID1A MUTATED | 6 | 6 | 17 | 10 |
ARID1A WILD-TYPE | 23 | 53 | 23 | 60 |
P value = 0.00067 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
ARID1A MUTATED | 19 | 9 | 4 | 5 | 2 |
ARID1A WILD-TYPE | 29 | 34 | 27 | 25 | 42 |
P value = 2e-05 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
ARID1A MUTATED | 6 | 8 | 3 | 5 | 5 | 2 | 10 |
ARID1A WILD-TYPE | 26 | 7 | 31 | 35 | 27 | 26 | 5 |
P value = 0.00222 (Fisher's exact test), Q value = 0.49
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
ARID1A MUTATED | 28 | 11 | 2 |
ARID1A WILD-TYPE | 74 | 64 | 42 |
P value = 0.00285 (Fisher's exact test), Q value = 0.62
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
ARID1A MUTATED | 15 | 17 | 4 | 5 |
ARID1A WILD-TYPE | 26 | 66 | 41 | 47 |
P value = 0.813 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
ARID1A MUTATED | 4 | 1 | 10 | 7 | 2 | 3 |
ARID1A WILD-TYPE | 17 | 7 | 47 | 21 | 12 | 26 |
P value = 0.225 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
ARID1A MUTATED | 17 | 4 | 6 |
ARID1A WILD-TYPE | 82 | 33 | 15 |
P value = 0.00096 (Fisher's exact test), Q value = 0.22
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
PGM5 MUTATED | 0 | 16 | 3 | 1 | 2 |
PGM5 WILD-TYPE | 57 | 81 | 19 | 34 | 7 |
P value = 0.00015 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
PGM5 MUTATED | 14 | 1 | 1 |
PGM5 WILD-TYPE | 54 | 48 | 58 |
P value = 0.184 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
PGM5 MUTATED | 10 | 4 | 6 |
PGM5 WILD-TYPE | 53 | 64 | 61 |
P value = 0.023 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
PGM5 MUTATED | 5 | 4 | 8 | 3 |
PGM5 WILD-TYPE | 24 | 55 | 32 | 67 |
P value = 0.00057 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
PGM5 MUTATED | 11 | 2 | 5 | 1 | 0 |
PGM5 WILD-TYPE | 37 | 41 | 26 | 29 | 44 |
P value = 0.00322 (Fisher's exact test), Q value = 0.69
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
PGM5 MUTATED | 2 | 0 | 2 | 6 | 3 | 0 | 6 |
PGM5 WILD-TYPE | 30 | 15 | 32 | 34 | 29 | 28 | 9 |
P value = 0.00918 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
PGM5 MUTATED | 17 | 3 | 2 |
PGM5 WILD-TYPE | 85 | 72 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
PGM5 MUTATED | 13 | 6 | 2 | 1 |
PGM5 WILD-TYPE | 28 | 77 | 43 | 51 |
P value = 0.198 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
PGM5 MUTATED | 3 | 2 | 4 | 4 | 0 | 1 |
PGM5 WILD-TYPE | 18 | 6 | 53 | 24 | 14 | 28 |
P value = 0.19 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
PGM5 MUTATED | 8 | 2 | 4 |
PGM5 WILD-TYPE | 91 | 35 | 17 |
P value = 0.0765 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
RHOA MUTATED | 0 | 10 | 1 | 2 | 0 |
RHOA WILD-TYPE | 57 | 87 | 21 | 33 | 9 |
P value = 0.385 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
RHOA MUTATED | 3 | 2 | 6 |
RHOA WILD-TYPE | 65 | 47 | 53 |
P value = 0.872 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
RHOA MUTATED | 3 | 4 | 5 |
RHOA WILD-TYPE | 60 | 64 | 62 |
P value = 0.713 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
RHOA MUTATED | 2 | 5 | 1 | 4 |
RHOA WILD-TYPE | 27 | 54 | 39 | 66 |
P value = 0.542 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
RHOA MUTATED | 2 | 4 | 2 | 3 | 1 |
RHOA WILD-TYPE | 46 | 39 | 29 | 27 | 43 |
P value = 0.799 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
RHOA MUTATED | 2 | 0 | 4 | 3 | 2 | 1 | 0 |
RHOA WILD-TYPE | 30 | 15 | 30 | 37 | 30 | 27 | 15 |
P value = 0.00279 (Fisher's exact test), Q value = 0.61
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
RHOA MUTATED | 3 | 10 | 0 |
RHOA WILD-TYPE | 99 | 65 | 44 |
P value = 0.211 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
RHOA MUTATED | 1 | 6 | 5 | 1 |
RHOA WILD-TYPE | 40 | 77 | 40 | 51 |
P value = 0.136 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
RHOA MUTATED | 0 | 1 | 3 | 0 | 1 | 4 |
RHOA WILD-TYPE | 21 | 7 | 54 | 28 | 13 | 25 |
P value = 0.0815 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
RHOA MUTATED | 4 | 5 | 0 |
RHOA WILD-TYPE | 95 | 32 | 21 |
P value = 0.17 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
SMAD4 MUTATED | 5 | 6 | 1 | 7 | 0 |
SMAD4 WILD-TYPE | 52 | 91 | 21 | 28 | 9 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
SMAD4 MUTATED | 6 | 4 | 5 |
SMAD4 WILD-TYPE | 62 | 45 | 54 |
P value = 0.0659 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
SMAD4 MUTATED | 9 | 5 | 2 |
SMAD4 WILD-TYPE | 54 | 63 | 65 |
P value = 0.332 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
SMAD4 MUTATED | 3 | 2 | 5 | 6 |
SMAD4 WILD-TYPE | 26 | 57 | 35 | 64 |
P value = 0.00214 (Fisher's exact test), Q value = 0.47
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
SMAD4 MUTATED | 5 | 1 | 7 | 4 | 0 |
SMAD4 WILD-TYPE | 43 | 42 | 24 | 26 | 44 |
P value = 0.261 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
SMAD4 MUTATED | 4 | 1 | 1 | 5 | 4 | 0 | 2 |
SMAD4 WILD-TYPE | 28 | 14 | 33 | 35 | 28 | 28 | 13 |
P value = 0.249 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
SMAD4 MUTATED | 11 | 7 | 1 |
SMAD4 WILD-TYPE | 91 | 68 | 43 |
P value = 0.497 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
SMAD4 MUTATED | 6 | 7 | 3 | 3 |
SMAD4 WILD-TYPE | 35 | 76 | 42 | 49 |
P value = 0.0956 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
SMAD4 MUTATED | 1 | 1 | 3 | 6 | 0 | 1 |
SMAD4 WILD-TYPE | 20 | 7 | 54 | 22 | 14 | 28 |
P value = 0.13 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
SMAD4 MUTATED | 6 | 2 | 4 |
SMAD4 WILD-TYPE | 93 | 35 | 17 |
P value = 0.466 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
IRF2 MUTATED | 2 | 9 | 1 | 1 | 1 |
IRF2 WILD-TYPE | 55 | 88 | 21 | 34 | 8 |
P value = 0.23 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
IRF2 MUTATED | 6 | 2 | 1 |
IRF2 WILD-TYPE | 62 | 47 | 58 |
P value = 0.0735 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
IRF2 MUTATED | 8 | 2 | 3 |
IRF2 WILD-TYPE | 55 | 66 | 64 |
P value = 0.35 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
IRF2 MUTATED | 2 | 2 | 5 | 4 |
IRF2 WILD-TYPE | 27 | 57 | 35 | 66 |
P value = 0.31 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
IRF2 MUTATED | 6 | 2 | 1 | 1 | 1 |
IRF2 WILD-TYPE | 42 | 41 | 30 | 29 | 43 |
P value = 0.63 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
IRF2 MUTATED | 3 | 0 | 1 | 3 | 1 | 1 | 2 |
IRF2 WILD-TYPE | 29 | 15 | 33 | 37 | 31 | 27 | 13 |
P value = 0.0336 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
IRF2 MUTATED | 11 | 1 | 2 |
IRF2 WILD-TYPE | 91 | 74 | 42 |
P value = 0.0217 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
IRF2 MUTATED | 7 | 5 | 1 | 1 |
IRF2 WILD-TYPE | 34 | 78 | 44 | 51 |
P value = 0.614 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
IRF2 MUTATED | 1 | 0 | 5 | 1 | 1 | 0 |
IRF2 WILD-TYPE | 20 | 8 | 52 | 27 | 13 | 29 |
P value = 0.87 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
IRF2 MUTATED | 6 | 1 | 1 |
IRF2 WILD-TYPE | 93 | 36 | 20 |
P value = 0.0974 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
LARP4B MUTATED | 1 | 10 | 1 | 0 | 0 |
LARP4B WILD-TYPE | 56 | 87 | 21 | 35 | 9 |
P value = 0.0495 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
LARP4B MUTATED | 6 | 3 | 0 |
LARP4B WILD-TYPE | 62 | 46 | 59 |
P value = 0.00322 (Fisher's exact test), Q value = 0.69
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
LARP4B MUTATED | 8 | 0 | 3 |
LARP4B WILD-TYPE | 55 | 68 | 64 |
P value = 0.0232 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
LARP4B MUTATED | 2 | 2 | 6 | 1 |
LARP4B WILD-TYPE | 27 | 57 | 34 | 69 |
P value = 0.153 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
LARP4B MUTATED | 4 | 0 | 2 | 3 | 1 |
LARP4B WILD-TYPE | 44 | 43 | 29 | 27 | 43 |
P value = 0.0834 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
LARP4B MUTATED | 2 | 0 | 0 | 1 | 3 | 1 | 3 |
LARP4B WILD-TYPE | 30 | 15 | 34 | 39 | 29 | 27 | 12 |
P value = 0.175 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
LARP4B MUTATED | 9 | 2 | 1 |
LARP4B WILD-TYPE | 93 | 73 | 43 |
P value = 0.0148 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
LARP4B MUTATED | 6 | 5 | 0 | 1 |
LARP4B WILD-TYPE | 35 | 78 | 45 | 51 |
P value = 0.333 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
LARP4B MUTATED | 3 | 0 | 4 | 2 | 0 | 0 |
LARP4B WILD-TYPE | 18 | 8 | 53 | 26 | 14 | 29 |
P value = 0.137 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
LARP4B MUTATED | 7 | 0 | 2 |
LARP4B WILD-TYPE | 92 | 37 | 19 |
P value = 0.497 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
APC MUTATED | 10 | 16 | 4 | 2 | 1 |
APC WILD-TYPE | 47 | 81 | 18 | 33 | 8 |
P value = 0.0228 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
APC MUTATED | 12 | 8 | 2 |
APC WILD-TYPE | 56 | 41 | 57 |
P value = 0.076 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
APC MUTATED | 13 | 5 | 11 |
APC WILD-TYPE | 50 | 63 | 56 |
P value = 0.00052 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
APC MUTATED | 5 | 6 | 14 | 4 |
APC WILD-TYPE | 24 | 53 | 26 | 66 |
P value = 0.23 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
APC MUTATED | 9 | 2 | 5 | 6 | 7 |
APC WILD-TYPE | 39 | 41 | 26 | 24 | 37 |
P value = 0.0034 (Fisher's exact test), Q value = 0.72
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
APC MUTATED | 1 | 0 | 2 | 8 | 8 | 4 | 6 |
APC WILD-TYPE | 31 | 15 | 32 | 32 | 24 | 24 | 9 |
P value = 0.00657 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
APC MUTATED | 22 | 4 | 7 |
APC WILD-TYPE | 80 | 71 | 37 |
P value = 0.00182 (Fisher's exact test), Q value = 0.41
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
APC MUTATED | 13 | 8 | 2 | 10 |
APC WILD-TYPE | 28 | 75 | 43 | 42 |
P value = 0.403 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
APC MUTATED | 3 | 2 | 8 | 2 | 1 | 1 |
APC WILD-TYPE | 18 | 6 | 49 | 26 | 13 | 28 |
P value = 0.183 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
APC MUTATED | 13 | 1 | 3 |
APC WILD-TYPE | 86 | 36 | 18 |
P value = 0.0589 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
FBXW7 MUTATED | 2 | 15 | 1 | 1 | 0 |
FBXW7 WILD-TYPE | 55 | 82 | 21 | 34 | 9 |
P value = 0.0104 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
FBXW7 MUTATED | 11 | 3 | 1 |
FBXW7 WILD-TYPE | 57 | 46 | 58 |
P value = 0.00177 (Fisher's exact test), Q value = 0.4
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
FBXW7 MUTATED | 12 | 1 | 5 |
FBXW7 WILD-TYPE | 51 | 67 | 62 |
P value = 0.014 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
FBXW7 MUTATED | 4 | 4 | 8 | 2 |
FBXW7 WILD-TYPE | 25 | 55 | 32 | 68 |
P value = 0.0145 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
FBXW7 MUTATED | 10 | 1 | 1 | 2 | 2 |
FBXW7 WILD-TYPE | 38 | 42 | 30 | 28 | 42 |
P value = 7e-05 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
FBXW7 MUTATED | 4 | 0 | 0 | 1 | 2 | 2 | 7 |
FBXW7 WILD-TYPE | 28 | 15 | 34 | 39 | 30 | 26 | 8 |
P value = 0.0112 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
FBXW7 MUTATED | 15 | 2 | 2 |
FBXW7 WILD-TYPE | 87 | 73 | 42 |
P value = 0.00041 (Fisher's exact test), Q value = 0.099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
FBXW7 MUTATED | 11 | 5 | 1 | 2 |
FBXW7 WILD-TYPE | 30 | 78 | 44 | 50 |
P value = 0.106 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
FBXW7 MUTATED | 4 | 0 | 6 | 4 | 0 | 0 |
FBXW7 WILD-TYPE | 17 | 8 | 51 | 24 | 14 | 29 |
P value = 0.0178 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
FBXW7 MUTATED | 10 | 0 | 4 |
FBXW7 WILD-TYPE | 89 | 37 | 17 |
P value = 0.0316 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
CDH1 MUTATED | 0 | 12 | 2 | 3 | 0 |
CDH1 WILD-TYPE | 57 | 85 | 20 | 32 | 9 |
P value = 0.338 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
CDH1 MUTATED | 5 | 2 | 7 |
CDH1 WILD-TYPE | 63 | 47 | 52 |
P value = 0.613 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
CDH1 MUTATED | 4 | 8 | 6 |
CDH1 WILD-TYPE | 59 | 60 | 61 |
P value = 0.879 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
CDH1 MUTATED | 2 | 7 | 3 | 6 |
CDH1 WILD-TYPE | 27 | 52 | 37 | 64 |
P value = 0.126 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
CDH1 MUTATED | 2 | 7 | 1 | 4 | 2 |
CDH1 WILD-TYPE | 46 | 36 | 30 | 26 | 42 |
P value = 0.0492 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
CDH1 MUTATED | 1 | 0 | 8 | 3 | 3 | 1 | 0 |
CDH1 WILD-TYPE | 31 | 15 | 26 | 37 | 29 | 27 | 15 |
P value = 0.186 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
CDH1 MUTATED | 8 | 9 | 1 |
CDH1 WILD-TYPE | 94 | 66 | 43 |
P value = 0.004 (Fisher's exact test), Q value = 0.84
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
CDH1 MUTATED | 6 | 3 | 8 | 1 |
CDH1 WILD-TYPE | 35 | 80 | 37 | 51 |
P value = 0.12 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
CDH1 MUTATED | 0 | 0 | 5 | 1 | 2 | 6 |
CDH1 WILD-TYPE | 21 | 8 | 52 | 27 | 12 | 23 |
P value = 0.545 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
CDH1 MUTATED | 8 | 5 | 1 |
CDH1 WILD-TYPE | 91 | 32 | 20 |
P value = 0.0782 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
HLA-B MUTATED | 0 | 9 | 2 | 1 | 0 |
HLA-B WILD-TYPE | 57 | 88 | 20 | 34 | 9 |
P value = 0.00032 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
HLA-B MUTATED | 9 | 0 | 0 |
HLA-B WILD-TYPE | 59 | 49 | 59 |
P value = 0.00499 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
HLA-B MUTATED | 9 | 1 | 2 |
HLA-B WILD-TYPE | 54 | 67 | 65 |
P value = 0.00178 (Fisher's exact test), Q value = 0.4
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
HLA-B MUTATED | 3 | 1 | 7 | 1 |
HLA-B WILD-TYPE | 26 | 58 | 33 | 69 |
P value = 0.0209 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
HLA-B MUTATED | 5 | 0 | 2 | 3 | 0 |
HLA-B WILD-TYPE | 43 | 43 | 29 | 27 | 44 |
P value = 0.0408 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
HLA-B MUTATED | 3 | 1 | 0 | 1 | 2 | 0 | 3 |
HLA-B WILD-TYPE | 29 | 14 | 34 | 39 | 30 | 28 | 12 |
P value = 0.0249 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
HLA-B MUTATED | 10 | 2 | 0 |
HLA-B WILD-TYPE | 92 | 73 | 44 |
P value = 0.0553 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
HLA-B MUTATED | 5 | 5 | 2 | 0 |
HLA-B WILD-TYPE | 36 | 78 | 43 | 52 |
P value = 0.756 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
HLA-B MUTATED | 0 | 0 | 5 | 1 | 0 | 1 |
HLA-B WILD-TYPE | 21 | 8 | 52 | 27 | 14 | 28 |
P value = 0.864 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
HLA-B MUTATED | 4 | 2 | 1 |
HLA-B WILD-TYPE | 95 | 35 | 20 |
P value = 0.0029 (Fisher's exact test), Q value = 0.63
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
BCOR MUTATED | 0 | 13 | 2 | 0 | 1 |
BCOR WILD-TYPE | 57 | 84 | 20 | 35 | 8 |
P value = 0.0508 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
BCOR MUTATED | 7 | 0 | 3 |
BCOR WILD-TYPE | 61 | 49 | 56 |
P value = 0.171 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
BCOR MUTATED | 7 | 2 | 5 |
BCOR WILD-TYPE | 56 | 66 | 62 |
P value = 0.0143 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
BCOR MUTATED | 2 | 4 | 7 | 1 |
BCOR WILD-TYPE | 27 | 55 | 33 | 69 |
P value = 0.0193 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
BCOR MUTATED | 8 | 2 | 1 | 2 | 0 |
BCOR WILD-TYPE | 40 | 41 | 30 | 28 | 44 |
P value = 0.00596 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
BCOR MUTATED | 4 | 3 | 0 | 1 | 2 | 0 | 3 |
BCOR WILD-TYPE | 28 | 12 | 34 | 39 | 30 | 28 | 12 |
P value = 0.00846 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
BCOR MUTATED | 13 | 3 | 0 |
BCOR WILD-TYPE | 89 | 72 | 44 |
P value = 0.114 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
BCOR MUTATED | 6 | 7 | 2 | 1 |
BCOR WILD-TYPE | 35 | 76 | 43 | 51 |
P value = 0.791 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
BCOR MUTATED | 0 | 0 | 5 | 2 | 0 | 2 |
BCOR WILD-TYPE | 21 | 8 | 52 | 26 | 14 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
BCOR MUTATED | 6 | 2 | 1 |
BCOR WILD-TYPE | 93 | 35 | 20 |
P value = 0.19 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
C13ORF33 MUTATED | 0 | 3 | 1 | 1 | 1 |
C13ORF33 WILD-TYPE | 57 | 94 | 21 | 34 | 8 |
P value = 0.00436 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
C13ORF33 MUTATED | 6 | 0 | 0 |
C13ORF33 WILD-TYPE | 62 | 49 | 59 |
P value = 0.0154 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
C13ORF33 MUTATED | 5 | 1 | 0 |
C13ORF33 WILD-TYPE | 58 | 67 | 67 |
P value = 0.277 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
C13ORF33 MUTATED | 1 | 1 | 3 | 1 |
C13ORF33 WILD-TYPE | 28 | 58 | 37 | 69 |
P value = 0.123 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
C13ORF33 MUTATED | 3 | 0 | 1 | 0 | 0 |
C13ORF33 WILD-TYPE | 45 | 43 | 30 | 30 | 44 |
P value = 0.00291 (Fisher's exact test), Q value = 0.63
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
C13ORF33 MUTATED | 0 | 0 | 0 | 1 | 0 | 0 | 3 |
C13ORF33 WILD-TYPE | 32 | 15 | 34 | 39 | 32 | 28 | 12 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
C13ORF33 MUTATED | 3 | 2 | 1 |
C13ORF33 WILD-TYPE | 99 | 73 | 43 |
P value = 0.203 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
C13ORF33 MUTATED | 3 | 2 | 1 | 0 |
C13ORF33 WILD-TYPE | 38 | 81 | 44 | 52 |
P value = 0.115 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
C13ORF33 MUTATED | 1 | 0 | 0 | 3 | 0 | 1 |
C13ORF33 WILD-TYPE | 20 | 8 | 57 | 25 | 14 | 28 |
P value = 0.217 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
C13ORF33 MUTATED | 2 | 1 | 2 |
C13ORF33 WILD-TYPE | 97 | 36 | 19 |
P value = 0.0211 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
CIC MUTATED | 0 | 11 | 0 | 2 | 1 |
CIC WILD-TYPE | 57 | 86 | 22 | 33 | 8 |
P value = 0.00589 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
CIC MUTATED | 8 | 0 | 1 |
CIC WILD-TYPE | 60 | 49 | 58 |
P value = 0.0321 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
CIC MUTATED | 9 | 2 | 3 |
CIC WILD-TYPE | 54 | 66 | 64 |
P value = 0.0132 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
CIC MUTATED | 4 | 3 | 6 | 1 |
CIC WILD-TYPE | 25 | 56 | 34 | 69 |
P value = 0.664 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
CIC MUTATED | 3 | 2 | 1 | 3 | 1 |
CIC WILD-TYPE | 45 | 41 | 30 | 27 | 43 |
P value = 0.00505 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
CIC MUTATED | 4 | 0 | 0 | 0 | 4 | 0 | 2 |
CIC WILD-TYPE | 28 | 15 | 34 | 40 | 28 | 28 | 13 |
P value = 0.0104 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
CIC MUTATED | 12 | 1 | 1 |
CIC WILD-TYPE | 90 | 74 | 43 |
P value = 0.00023 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
CIC MUTATED | 9 | 4 | 1 | 0 |
CIC WILD-TYPE | 32 | 79 | 44 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
CIC MUTATED | 1 | 0 | 3 | 1 | 0 | 1 |
CIC WILD-TYPE | 20 | 8 | 54 | 27 | 14 | 28 |
P value = 0.0517 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
CIC MUTATED | 2 | 1 | 3 |
CIC WILD-TYPE | 97 | 36 | 18 |
P value = 0.0637 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
ACVR1B MUTATED | 0 | 8 | 0 | 1 | 1 |
ACVR1B WILD-TYPE | 57 | 89 | 22 | 34 | 8 |
P value = 0.297 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
ACVR1B MUTATED | 5 | 1 | 1 |
ACVR1B WILD-TYPE | 63 | 48 | 58 |
P value = 0.666 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
ACVR1B MUTATED | 4 | 2 | 4 |
ACVR1B WILD-TYPE | 59 | 66 | 63 |
P value = 0.157 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
ACVR1B MUTATED | 1 | 2 | 5 | 2 |
ACVR1B WILD-TYPE | 28 | 57 | 35 | 68 |
P value = 0.00535 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
ACVR1B MUTATED | 3 | 0 | 0 | 4 | 0 |
ACVR1B WILD-TYPE | 45 | 43 | 31 | 26 | 44 |
P value = 0.359 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
ACVR1B MUTATED | 2 | 0 | 0 | 2 | 3 | 0 | 0 |
ACVR1B WILD-TYPE | 30 | 15 | 34 | 38 | 29 | 28 | 15 |
P value = 0.0809 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
ACVR1B MUTATED | 8 | 2 | 0 |
ACVR1B WILD-TYPE | 94 | 73 | 44 |
P value = 0.00876 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
ACVR1B MUTATED | 6 | 3 | 1 | 0 |
ACVR1B WILD-TYPE | 35 | 80 | 44 | 52 |
P value = 0.479 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
ACVR1B MUTATED | 1 | 1 | 3 | 2 | 0 | 0 |
ACVR1B WILD-TYPE | 20 | 7 | 54 | 26 | 14 | 29 |
P value = 0.199 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
ACVR1B MUTATED | 5 | 0 | 2 |
ACVR1B WILD-TYPE | 94 | 37 | 19 |
P value = 0.0196 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
ZBTB20 MUTATED | 0 | 13 | 1 | 2 | 0 |
ZBTB20 WILD-TYPE | 57 | 84 | 21 | 33 | 9 |
P value = 0.00101 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
ZBTB20 MUTATED | 10 | 0 | 1 |
ZBTB20 WILD-TYPE | 58 | 49 | 58 |
P value = 0.149 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
ZBTB20 MUTATED | 7 | 2 | 6 |
ZBTB20 WILD-TYPE | 56 | 66 | 61 |
P value = 0.168 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
ZBTB20 MUTATED | 3 | 3 | 6 | 3 |
ZBTB20 WILD-TYPE | 26 | 56 | 34 | 67 |
P value = 0.0437 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
ZBTB20 MUTATED | 6 | 1 | 1 | 5 | 1 |
ZBTB20 WILD-TYPE | 42 | 42 | 30 | 25 | 43 |
P value = 0.00418 (Fisher's exact test), Q value = 0.88
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
ZBTB20 MUTATED | 3 | 0 | 0 | 2 | 5 | 0 | 4 |
ZBTB20 WILD-TYPE | 29 | 15 | 34 | 38 | 27 | 28 | 11 |
P value = 0.00203 (Fisher's exact test), Q value = 0.45
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
ZBTB20 MUTATED | 14 | 2 | 0 |
ZBTB20 WILD-TYPE | 88 | 73 | 44 |
P value = 0.00047 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
ZBTB20 MUTATED | 9 | 6 | 1 | 0 |
ZBTB20 WILD-TYPE | 32 | 77 | 44 | 52 |
P value = 0.218 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
ZBTB20 MUTATED | 1 | 1 | 4 | 4 | 0 | 0 |
ZBTB20 WILD-TYPE | 20 | 7 | 53 | 24 | 14 | 29 |
P value = 0.134 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
ZBTB20 MUTATED | 8 | 0 | 2 |
ZBTB20 WILD-TYPE | 91 | 37 | 19 |
P value = 0.255 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
MVK MUTATED | 0 | 6 | 0 | 2 | 0 |
MVK WILD-TYPE | 57 | 91 | 22 | 33 | 9 |
P value = 0.0395 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
MVK MUTATED | 4 | 0 | 0 |
MVK WILD-TYPE | 64 | 49 | 59 |
P value = 0.0431 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
MVK MUTATED | 5 | 0 | 3 |
MVK WILD-TYPE | 58 | 68 | 64 |
P value = 0.00106 (Fisher's exact test), Q value = 0.24
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
MVK MUTATED | 1 | 1 | 6 | 0 |
MVK WILD-TYPE | 28 | 58 | 34 | 70 |
P value = 0.553 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
MVK MUTATED | 3 | 1 | 1 | 1 | 0 |
MVK WILD-TYPE | 45 | 42 | 30 | 29 | 44 |
P value = 0.173 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
MVK MUTATED | 1 | 1 | 0 | 1 | 1 | 0 | 2 |
MVK WILD-TYPE | 31 | 14 | 34 | 39 | 31 | 28 | 13 |
P value = 0.0829 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
MVK MUTATED | 7 | 1 | 0 |
MVK WILD-TYPE | 95 | 74 | 44 |
P value = 0.00128 (Fisher's exact test), Q value = 0.29
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
MVK MUTATED | 6 | 1 | 1 | 0 |
MVK WILD-TYPE | 35 | 82 | 44 | 52 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
MVK MUTATED | 0 | 0 | 1 | 1 | 0 | 1 |
MVK WILD-TYPE | 21 | 8 | 56 | 27 | 14 | 28 |
P value = 0.306 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
MVK MUTATED | 1 | 1 | 1 |
MVK WILD-TYPE | 98 | 36 | 20 |
P value = 0.892 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
ERBB2 MUTATED | 2 | 7 | 1 | 1 | 0 |
ERBB2 WILD-TYPE | 55 | 90 | 21 | 34 | 9 |
P value = 0.433 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
ERBB2 MUTATED | 5 | 1 | 2 |
ERBB2 WILD-TYPE | 63 | 48 | 57 |
P value = 0.264 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
ERBB2 MUTATED | 6 | 2 | 3 |
ERBB2 WILD-TYPE | 57 | 66 | 64 |
P value = 0.674 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
ERBB2 MUTATED | 3 | 3 | 2 | 3 |
ERBB2 WILD-TYPE | 26 | 56 | 38 | 67 |
P value = 0.762 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
ERBB2 MUTATED | 4 | 2 | 1 | 2 | 1 |
ERBB2 WILD-TYPE | 44 | 41 | 30 | 28 | 43 |
P value = 0.65 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
ERBB2 MUTATED | 2 | 0 | 1 | 3 | 3 | 0 | 1 |
ERBB2 WILD-TYPE | 30 | 15 | 33 | 37 | 29 | 28 | 14 |
P value = 0.255 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
ERBB2 MUTATED | 8 | 2 | 1 |
ERBB2 WILD-TYPE | 94 | 73 | 43 |
P value = 0.436 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
ERBB2 MUTATED | 4 | 4 | 2 | 1 |
ERBB2 WILD-TYPE | 37 | 79 | 43 | 51 |
P value = 0.828 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
ERBB2 MUTATED | 1 | 0 | 3 | 3 | 0 | 1 |
ERBB2 WILD-TYPE | 20 | 8 | 54 | 25 | 14 | 28 |
P value = 0.869 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
ERBB2 MUTATED | 6 | 1 | 1 |
ERBB2 WILD-TYPE | 93 | 36 | 20 |
P value = 0.0589 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
CR1 MUTATED | 2 | 13 | 0 | 3 | 2 |
CR1 WILD-TYPE | 55 | 84 | 22 | 32 | 7 |
P value = 8e-05 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
CR1 MUTATED | 12 | 1 | 0 |
CR1 WILD-TYPE | 56 | 48 | 59 |
P value = 0.0974 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
CR1 MUTATED | 10 | 3 | 6 |
CR1 WILD-TYPE | 53 | 65 | 61 |
P value = 0.104 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
CR1 MUTATED | 5 | 5 | 6 | 3 |
CR1 WILD-TYPE | 24 | 54 | 34 | 67 |
P value = 0.00052 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
CR1 MUTATED | 11 | 1 | 2 | 4 | 0 |
CR1 WILD-TYPE | 37 | 42 | 29 | 26 | 44 |
P value = 3e-05 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
CR1 MUTATED | 2 | 1 | 0 | 6 | 2 | 0 | 7 |
CR1 WILD-TYPE | 30 | 14 | 34 | 34 | 30 | 28 | 8 |
P value = 0.00078 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
CR1 MUTATED | 17 | 3 | 0 |
CR1 WILD-TYPE | 85 | 72 | 44 |
P value = 0.0191 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
CR1 MUTATED | 8 | 9 | 2 | 1 |
CR1 WILD-TYPE | 33 | 74 | 43 | 51 |
P value = 0.371 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
CR1 MUTATED | 0 | 0 | 5 | 4 | 0 | 1 |
CR1 WILD-TYPE | 21 | 8 | 52 | 24 | 14 | 28 |
P value = 0.704 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
CR1 MUTATED | 8 | 1 | 1 |
CR1 WILD-TYPE | 91 | 36 | 20 |
P value = 0.556 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
C1R MUTATED | 0 | 3 | 0 | 0 | 0 |
C1R WILD-TYPE | 57 | 94 | 22 | 35 | 9 |
P value = 0.213 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
C1R MUTATED | 2 | 0 | 1 |
C1R WILD-TYPE | 61 | 68 | 66 |
P value = 0.0408 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
C1R MUTATED | 1 | 0 | 2 | 0 |
C1R WILD-TYPE | 28 | 59 | 38 | 70 |
P value = 0.305 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
C1R MUTATED | 3 | 0 | 0 |
C1R WILD-TYPE | 99 | 75 | 44 |
P value = 0.225 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
C1R MUTATED | 2 | 1 | 0 | 0 |
C1R WILD-TYPE | 39 | 82 | 45 | 52 |
P value = 0.026 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
CTNND1 MUTATED | 1 | 11 | 0 | 0 | 1 |
CTNND1 WILD-TYPE | 56 | 86 | 22 | 35 | 8 |
P value = 0.0633 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
CTNND1 MUTATED | 8 | 2 | 1 |
CTNND1 WILD-TYPE | 60 | 47 | 58 |
P value = 0.284 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
CTNND1 MUTATED | 6 | 2 | 5 |
CTNND1 WILD-TYPE | 57 | 66 | 62 |
P value = 0.103 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
CTNND1 MUTATED | 2 | 3 | 6 | 2 |
CTNND1 WILD-TYPE | 27 | 56 | 34 | 68 |
P value = 0.0268 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
CTNND1 MUTATED | 7 | 1 | 0 | 3 | 1 |
CTNND1 WILD-TYPE | 41 | 42 | 31 | 27 | 43 |
P value = 0.531 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
CTNND1 MUTATED | 1 | 1 | 1 | 2 | 4 | 1 | 2 |
CTNND1 WILD-TYPE | 31 | 14 | 33 | 38 | 28 | 27 | 13 |
P value = 0.0906 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
CTNND1 MUTATED | 10 | 2 | 1 |
CTNND1 WILD-TYPE | 92 | 73 | 43 |
P value = 0.0585 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
CTNND1 MUTATED | 6 | 5 | 1 | 1 |
CTNND1 WILD-TYPE | 35 | 78 | 44 | 51 |
P value = 0.373 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
CTNND1 MUTATED | 2 | 2 | 4 | 2 | 0 | 1 |
CTNND1 WILD-TYPE | 19 | 6 | 53 | 26 | 14 | 28 |
P value = 0.178 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
CTNND1 MUTATED | 10 | 1 | 0 |
CTNND1 WILD-TYPE | 89 | 36 | 21 |
P value = 0.391 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
MLXIPL MUTATED | 1 | 8 | 1 | 2 | 1 |
MLXIPL WILD-TYPE | 56 | 89 | 21 | 33 | 8 |
P value = 0.346 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
MLXIPL MUTATED | 5 | 2 | 1 |
MLXIPL WILD-TYPE | 63 | 47 | 58 |
P value = 0.0306 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
MLXIPL MUTATED | 8 | 1 | 4 |
MLXIPL WILD-TYPE | 55 | 67 | 63 |
P value = 0.0123 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
MLXIPL MUTATED | 2 | 3 | 7 | 1 |
MLXIPL WILD-TYPE | 27 | 56 | 33 | 69 |
P value = 0.0757 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
MLXIPL MUTATED | 7 | 1 | 2 | 0 | 2 |
MLXIPL WILD-TYPE | 41 | 42 | 29 | 30 | 42 |
P value = 0.316 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
MLXIPL MUTATED | 3 | 0 | 0 | 4 | 2 | 1 | 2 |
MLXIPL WILD-TYPE | 29 | 15 | 34 | 36 | 30 | 27 | 13 |
P value = 0.0174 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
MLXIPL MUTATED | 11 | 1 | 1 |
MLXIPL WILD-TYPE | 91 | 74 | 43 |
P value = 0.109 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
MLXIPL MUTATED | 6 | 4 | 1 | 2 |
MLXIPL WILD-TYPE | 35 | 79 | 44 | 50 |
P value = 0.894 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
MLXIPL MUTATED | 2 | 0 | 3 | 1 | 0 | 1 |
MLXIPL WILD-TYPE | 19 | 8 | 54 | 27 | 14 | 28 |
P value = 0.618 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
MLXIPL MUTATED | 6 | 1 | 0 |
MLXIPL WILD-TYPE | 93 | 36 | 21 |
P value = 0.0358 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
MLL4 MUTATED | 1 | 15 | 1 | 2 | 1 |
MLL4 WILD-TYPE | 56 | 82 | 21 | 33 | 8 |
P value = 0.00021 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
MLL4 MUTATED | 12 | 0 | 1 |
MLL4 WILD-TYPE | 56 | 49 | 58 |
P value = 0.442 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
MLL4 MUTATED | 9 | 6 | 5 |
MLL4 WILD-TYPE | 54 | 62 | 62 |
P value = 0.0434 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
MLL4 MUTATED | 3 | 3 | 9 | 5 |
MLL4 WILD-TYPE | 26 | 56 | 31 | 65 |
P value = 0.0926 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
MLL4 MUTATED | 8 | 2 | 2 | 4 | 1 |
MLL4 WILD-TYPE | 40 | 41 | 29 | 26 | 43 |
P value = 0.00031 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
MLL4 MUTATED | 2 | 1 | 0 | 3 | 3 | 1 | 7 |
MLL4 WILD-TYPE | 30 | 14 | 34 | 37 | 29 | 27 | 8 |
P value = 0.0315 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
MLL4 MUTATED | 15 | 3 | 2 |
MLL4 WILD-TYPE | 87 | 72 | 42 |
P value = 0.00437 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
MLL4 MUTATED | 10 | 6 | 1 | 3 |
MLL4 WILD-TYPE | 31 | 77 | 44 | 49 |
P value = 0.825 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
MLL4 MUTATED | 1 | 0 | 6 | 2 | 0 | 1 |
MLL4 WILD-TYPE | 20 | 8 | 51 | 26 | 14 | 28 |
P value = 0.131 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
MLL4 MUTATED | 8 | 0 | 2 |
MLL4 WILD-TYPE | 91 | 37 | 19 |
P value = 0.758 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 57 | 97 | 22 | 35 | 9 |
NLK MUTATED | 1 | 4 | 0 | 0 | 0 |
NLK WILD-TYPE | 56 | 93 | 22 | 35 | 9 |
P value = 0.314 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 68 | 49 | 59 |
NLK MUTATED | 3 | 1 | 0 |
NLK WILD-TYPE | 65 | 48 | 59 |
P value = 0.165 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 63 | 68 | 67 |
NLK MUTATED | 3 | 0 | 2 |
NLK WILD-TYPE | 60 | 68 | 65 |
P value = 0.242 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 59 | 40 | 70 |
NLK MUTATED | 0 | 1 | 3 | 1 |
NLK WILD-TYPE | 29 | 58 | 37 | 69 |
P value = 0.414 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 48 | 43 | 31 | 30 | 44 |
NLK MUTATED | 3 | 0 | 1 | 0 | 1 |
NLK WILD-TYPE | 45 | 43 | 30 | 30 | 43 |
P value = 0.812 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 32 | 15 | 34 | 40 | 32 | 28 | 15 |
NLK MUTATED | 1 | 0 | 0 | 1 | 1 | 1 | 1 |
NLK WILD-TYPE | 31 | 15 | 34 | 39 | 31 | 27 | 14 |
P value = 0.218 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 75 | 44 |
NLK MUTATED | 4 | 0 | 1 |
NLK WILD-TYPE | 98 | 75 | 43 |
P value = 0.456 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 41 | 83 | 45 | 52 |
NLK MUTATED | 2 | 2 | 1 | 0 |
NLK WILD-TYPE | 39 | 81 | 44 | 52 |
P value = 0.513 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 21 | 8 | 57 | 28 | 14 | 29 |
NLK MUTATED | 1 | 0 | 1 | 1 | 1 | 0 |
NLK WILD-TYPE | 20 | 8 | 56 | 27 | 13 | 29 |
P value = 0.454 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 99 | 37 | 21 |
NLK MUTATED | 3 | 0 | 1 |
NLK WILD-TYPE | 96 | 37 | 20 |
-
Mutation data file = transformed.cor.cli.txt
-
Molecular subtypes file = STAD-TP.transferedmergedcluster.txt
-
Number of patients = 221
-
Number of significantly mutated genes = 27
-
Number of Molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.