Clinical Features Time to Death AGE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 43 (9%) 462 0.0034598 1 0.12528 1 9.9999e-06 0.00554 0.047867 1 0.04804 1 0.088469 1 1 1 1q gain 173 (34%) 332 0.12753 1 0.025989 1 0.63719 1 0.83371 1 0.98843 1 0.69202 1 0.15046 1 2p gain 87 (17%) 418 0.002378 1 0.0072777 1 9.9999e-06 0.00554 0.35634 1 0.60384 1 0.76639 1 0.13621 1 2q gain 71 (14%) 434 0.0061262 1 0.060135 1 9.9999e-06 0.00554 0.25067 1 0.29568 1 0.82121 1 0.22873 1 3p gain 44 (9%) 461 0.068635 1 0.40572 1 0.00088999 0.428 0.033683 1 0.34662 1 0.01569 1 1 1 3q gain 74 (15%) 431 0.0025806 1 0.012168 1 9.9999e-06 0.00554 0.39975 1 0.22776 1 0.01019 1 1 1 4p gain 14 (3%) 491 0.11484 1 0.0099378 1 0.00148 0.702 1 1 0.13512 1 0.01891 1 0.28249 1 4q gain 8 (2%) 497 0.64055 1 0.42763 1 0.01826 1 0.6897 1 0.48593 1 0.28455 1 0.13627 1 5p gain 48 (10%) 457 0.00052731 0.255 0.015835 1 9.9999e-06 0.00554 0.040706 1 0.10426 1 0.12041 1 0.3759 1 5q gain 18 (4%) 487 0.15011 1 0.69595 1 0.00278 1 0.42219 1 0.22946 1 0.47402 1 1 1 6p gain 73 (14%) 432 0.7899 1 0.052303 1 9.9999e-06 0.00554 0.47828 1 0.3344 1 0.03923 1 1 1 6q gain 59 (12%) 446 0.90997 1 0.10122 1 3e-05 0.0151 0.75827 1 0.19342 1 0.0050899 1 1 1 7p gain 61 (12%) 444 0.033742 1 0.18652 1 0.067809 1 0.28726 1 0.69205 1 0.8677 1 1 1 7q gain 57 (11%) 448 0.0010388 0.499 0.2455 1 0.30428 1 0.15932 1 0.5182 1 0.74269 1 1 1 8p gain 112 (22%) 393 0.057815 1 0.085479 1 0.74888 1 0.072113 1 0.16569 1 0.57515 1 0.74052 1 8q gain 146 (29%) 359 0.011175 1 0.89086 1 0.00356 1 0.06085 1 0.25334 1 0.80972 1 0.35873 1 9p gain 20 (4%) 485 0.71768 1 0.97874 1 0.073589 1 0.30571 1 0.36543 1 0.44029 1 0.010436 1 9q gain 7 (1%) 498 0.68384 1 0.92812 1 0.20078 1 0.67984 1 0.19163 1 0.072579 1 0.16755 1 10p gain 110 (22%) 395 0.84315 1 0.18978 1 0.7261 1 0.54538 1 0.80519 1 0.18671 1 0.3124 1 10q gain 104 (21%) 401 0.57943 1 0.6925 1 0.78719 1 0.6219 1 0.33025 1 0.19599 1 1 1 11p gain 21 (4%) 484 0.089446 1 0.14217 1 5e-05 0.0248 0.8077 1 0.20101 1 0.33638 1 0.4277 1 11q gain 18 (4%) 487 0.0031672 1 0.26641 1 0.01317 1 0.79029 1 0.27585 1 0.5574 1 1 1 12p gain 65 (13%) 440 0.10617 1 0.50045 1 5e-05 0.0248 0.18061 1 0.67222 1 0.03721 1 0.22877 1 12q gain 51 (10%) 454 0.1058 1 0.53964 1 0.070109 1 0.13479 1 0.56655 1 0.044 1 0.37586 1 13q gain 29 (6%) 476 0.80109 1 0.0083582 1 9.9999e-06 0.00554 1 1 0.22074 1 0.31112 1 1 1 14q gain 36 (7%) 469 0.26639 1 0.27252 1 9.9999e-06 0.00554 0.0060991 1 0.21628 1 0.35557 1 1 1 15q gain 10 (2%) 495 0.0093475 1 0.42065 1 0.645 1 0.2989 1 0.10275 1 0.38635 1 0.28249 1 16p gain 26 (5%) 479 0.53592 1 0.020872 1 0.01866 1 0.071669 1 0.27469 1 0.082309 1 0.50887 1 16q gain 9 (2%) 496 0.94767 1 0.13827 1 0.16824 1 0.45548 1 0.00081999 0.395 0.18628 1 0.22699 1 17p gain 11 (2%) 494 0.90604 1 0.6654 1 0.15153 1 1 1 0.20362 1 0.84677 1 0.28249 1 17q gain 28 (6%) 477 0.018997 1 0.2822 1 5e-05 0.0248 1 1 0.03186 1 0.0062299 1 0.56263 1 18p gain 68 (13%) 437 0.072823 1 0.0013989 0.664 9.9999e-06 0.00554 0.19179 1 0.01698 1 0.00035 0.171 0.69062 1 18q gain 41 (8%) 464 0.0048863 1 0.034191 1 9.9999e-06 0.00554 0.4704 1 0.0077199 1 0.23703 1 1 1 19p gain 50 (10%) 455 0.10472 1 1.2385e-06 0.00069 9.9999e-06 0.00554 0.24603 1 0.72732 1 0.069899 1 1 1 19q gain 50 (10%) 455 0.030032 1 1.835e-07 0.000103 9.9999e-06 0.00554 1 1 0.73261 1 0.01529 1 0.37586 1 20p gain 104 (21%) 401 0.033842 1 0.00015473 0.0758 9.9999e-06 0.00554 0.00193 0.913 0.091239 1 0.073159 1 1 1 20q gain 121 (24%) 384 0.0041791 1 1.1366e-05 0.00573 9.9999e-06 0.00554 0.0022465 1 0.01862 1 0.01368 1 0.50081 1 21q gain 35 (7%) 470 0.13053 1 0.0034372 1 9.9999e-06 0.00554 0.23674 1 0.37621 1 0.19475 1 1 1 22q gain 29 (6%) 476 0.049658 1 0.0029235 1 9.9999e-06 0.00554 0.83129 1 0.02004 1 0.11533 1 1 1 xq gain 60 (12%) 445 0.0091206 1 0.28735 1 0.29612 1 0.53829 1 0.23244 1 1 1 1 1 1p loss 24 (5%) 481 0.7417 1 0.063082 1 9.9999e-06 0.00554 1 1 0.00357 1 0.72053 1 1 1 1q loss 14 (3%) 491 0.0768 1 0.27235 1 3e-05 0.0151 0.36942 1 0.02273 1 0.39827 1 1 1 2p loss 11 (2%) 494 0.03256 1 0.17376 1 0.44706 1 0.040494 1 0.10605 1 0.38584 1 0.30884 1 2q loss 17 (3%) 488 0.0041367 1 0.089122 1 0.33697 1 0.050891 1 0.38267 1 0.48241 1 0.4277 1 3p loss 46 (9%) 459 0.14553 1 0.0070933 1 9.9999e-06 0.00554 0.72879 1 0.90946 1 0.59996 1 0.62048 1 3q loss 29 (6%) 476 0.68888 1 0.043556 1 9.9999e-06 0.00554 0.28355 1 0.44429 1 0.1153 1 1 1 4p loss 90 (18%) 415 0.024443 1 0.00015664 0.0766 9.9999e-06 0.00554 0.091041 1 0.39169 1 0.32625 1 0.27575 1 4q loss 92 (18%) 413 0.015191 1 5.9344e-05 0.0292 9.9999e-06 0.00554 0.070586 1 0.48888 1 0.1774 1 1 1 5p loss 50 (10%) 455 0.015275 1 0.15838 1 9.9999e-06 0.00554 0.18008 1 0.098879 1 0.30613 1 0.11987 1 5q loss 69 (14%) 436 0.013705 1 0.001315 0.626 9.9999e-06 0.00554 0.56161 1 0.53883 1 0.27301 1 0.083166 1 6p loss 16 (3%) 489 0.67915 1 0.10307 1 9.9999e-06 0.00554 0.77653 1 0.54436 1 0.70631 1 0.33429 1 6q loss 24 (5%) 481 0.58319 1 0.17066 1 9.9999e-06 0.00554 0.81695 1 0.45571 1 0.82738 1 0.46972 1 7p loss 41 (8%) 464 0.041344 1 5.6255e-05 0.0277 9.9999e-06 0.00554 0.27711 1 0.31475 1 0.04455 1 1 1 7q loss 40 (8%) 465 0.49501 1 0.0011887 0.567 9.9999e-06 0.00554 0.35599 1 0.52417 1 0.24059 1 1 1 8p loss 73 (14%) 432 0.12458 1 4.5132e-05 0.0225 9.9999e-06 0.00554 0.88733 1 0.36511 1 0.055669 1 0.70217 1 8q loss 23 (5%) 482 0.65098 1 0.1995 1 9.9999e-06 0.00554 0.63825 1 0.52778 1 0.2207 1 0.46972 1 9p loss 93 (18%) 412 0.026262 1 1.7892e-05 0.009 9.9999e-06 0.00554 0.607 1 0.03425 1 0.6497 1 1 1 9q loss 111 (22%) 394 0.036473 1 5.9872e-09 3.35e-06 9.9999e-06 0.00554 0.33555 1 0.19071 1 0.24867 1 0.74128 1 10p loss 37 (7%) 468 0.19458 1 0.0096812 1 9.9999e-06 0.00554 0.33718 1 0.12136 1 0.03694 1 0.61032 1 10q loss 35 (7%) 470 0.40088 1 0.0062063 1 9.9999e-06 0.00554 0.23674 1 0.48943 1 0.20911 1 0.6109 1 11p loss 68 (13%) 437 0.013562 1 0.001087 0.52 9.9999e-06 0.00554 0.028022 1 0.29485 1 0.121 1 0.69062 1 11q loss 66 (13%) 439 0.028068 1 0.0040004 1 9.9999e-06 0.00554 0.0027473 1 0.1078 1 0.067589 1 0.39655 1 12p loss 40 (8%) 465 0.0010465 0.501 0.064432 1 9.9999e-06 0.00554 0.19485 1 0.053259 1 0.39257 1 1 1 12q loss 32 (6%) 473 0.00048215 0.234 0.068536 1 9.9999e-06 0.00554 0.31036 1 0.62806 1 0.40459 1 0.56263 1 13q loss 83 (16%) 422 0.033867 1 0.021368 1 9.9999e-06 0.00554 0.043055 1 0.46113 1 0.61967 1 0.2658 1 14q loss 57 (11%) 448 0.025171 1 0.0038366 1 9.9999e-06 0.00554 0.43422 1 0.69292 1 0.01018 1 0.13634 1 15q loss 100 (20%) 405 0.0090722 1 5.1907e-06 0.00288 9.9999e-06 0.00554 0.044505 1 0.33171 1 0.17525 1 1 1 16p loss 89 (18%) 416 0.029921 1 3.2103e-05 0.0161 9.9999e-06 0.00554 0.19044 1 0.01211 1 0.10375 1 0.4718 1 16q loss 127 (25%) 378 0.066563 1 8.8283e-07 0.000493 9.9999e-06 0.00554 0.084601 1 0.02621 1 0.03441 1 1 1 17p loss 116 (23%) 389 0.0055068 1 4.8526e-06 0.0027 9.9999e-06 0.00554 0.40807 1 0.13348 1 0.01117 1 0.50809 1 17q loss 84 (17%) 421 0.077761 1 0.0001248 0.0613 9.9999e-06 0.00554 0.34813 1 0.34667 1 0.30504 1 0.049504 1 18p loss 46 (9%) 459 0.3462 1 0.02865 1 5e-05 0.0248 0.29707 1 0.16482 1 0.98788 1 1 1 18q loss 58 (11%) 447 0.45319 1 0.021104 1 9.9999e-06 0.00554 0.27389 1 0.1843 1 0.267 1 0.67931 1 19p loss 54 (11%) 451 0.00048471 0.235 0.10801 1 9.9999e-06 0.00554 0.87285 1 0.070869 1 0.61868 1 0.15363 1 19q loss 52 (10%) 453 0.0004441 0.216 0.15814 1 9.9999e-06 0.00554 0.32814 1 0.15435 1 0.38569 1 0.128 1 20p loss 16 (3%) 489 0.58454 1 0.11522 1 0.0099499 1 0.047839 1 0.137 1 0.3976 1 0.35888 1 20q loss 8 (2%) 497 0.27652 1 0.58761 1 0.0094599 1 0.038363 1 1 1 0.47733 1 1 1 21q loss 51 (10%) 454 0.024103 1 0.0078518 1 9.9999e-06 0.00554 1 1 0.28028 1 0.33853 1 1 1 22q loss 100 (20%) 405 0.060423 1 4.8729e-05 0.0243 9.9999e-06 0.00554 0.044505 1 0.5283 1 0.13776 1 0.15985 1 xq loss 65 (13%) 440 0.01319 1 0.00036678 0.179 9.9999e-06 0.00554 0.10092 1 0.15062 1 0.15951 1 0.083166 1