[1] "started"
[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/analysis.results.RData"
[1] "MUTSIG"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
                   V1.D                      V2                      V3 
        "Time to Death"        "YEARS_TO_BIRTH" "NEOPLASM_DISEASESTAGE" 
                     V4                      V5                      V6 
    "PATHOLOGY_T_STAGE"     "PATHOLOGY_N_STAGE"     "PATHOLOGY_M_STAGE" 
                     V7                      V8 
               "GENDER"                  "RACE" 
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D3V2.png"
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D4V7.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D4V8.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D5V2.png"
[1] FALSE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D5V4.png"
[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D5V8.png"
[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D7V2.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D7V3.png"
[1] TRUE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D7V5.png"
[1] FALSE
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[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D7V7.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D7V8.png"
[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D15V4.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D15V5.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D15V6.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D15V7.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D15V8.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V1.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V2.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V3.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V4.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V5.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V6.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V7.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/CHOL-TP/15866323/D16V8.png"
[1] TRUE
