
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/39/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/CHOL-TP/14528412/CHOL-TP.meth.by_max_stddev.data.txt", "-u9847", "-oCHOL-TP")
Cluster size 9847 broken into 4777 5070 
Cluster size 4777 broken into 1488 3289 
Done cluster 1488 
Cluster size 3289 broken into 1803 1486 
Cluster size 1803 broken into 1156 647 
Done cluster 1156 
Done cluster 647 
Done cluster 1803 
Done cluster 1486 
Done cluster 3289 
Done cluster 4777 
Cluster size 5070 broken into 2125 2945 
Cluster size 2125 broken into 1031 1094 
Done cluster 1031 
Done cluster 1094 
Done cluster 2125 
Cluster size 2945 broken into 1666 1279 
Cluster size 1666 broken into 412 1254 
Done cluster 412 
Done cluster 1254 
Done cluster 1666 
Done cluster 1279 
Done cluster 2945 
Done cluster 5070 
> q(save="no")
