name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-A6-2671-01A-01D-1408-10	125	125	0	81	0	coding only	1	28834635	...	44	71	125	1.525943e-06	2.462317e-06	4.335064e-06	-5.363004e+00	...	10	28778448	...	3.474823e-07
TCGA-A6-2672-01A-01W-0833-10	586	586	0	408	0	coding only	1	28834635	...	176	391	576	6.103771e-06	1.356008e-05	1.997598e-05	-4.699492e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-2674-01A-02W-0831-10	29	29	0	21	0	coding only	1	28834635	...	8	20	28	2.774441e-07	6.936103e-07	9.710544e-07	-6.012756e+00	...	0	28778448	...	0
TCGA-A6-2676-01A-01W-0833-10	803	803	0	574	0	coding only	1	28834635	...	227	515	791	7.872477e-06	1.786047e-05	2.743229e-05	-4.561738e+00	...	49	28778448	...	1.702663e-06
TCGA-A6-2677-01A-01W-0831-10	77	77	0	56	0	coding only	1	28834635	...	21	53	77	7.282908e-07	1.838067e-06	2.670400e-06	-5.573424e+00	...	3	28778448	...	1.042447e-07
TCGA-A6-2678-01A-01W-0831-10	69	69	0	62	0	coding only	1	28834635	...	7	61	68	2.427636e-07	2.115511e-06	2.358275e-06	-5.627406e+00	...	0	28778448	...	0
TCGA-A6-2683-01A-01W-0831-10	101	101	0	70	0	coding only	1	28834635	...	30	68	100	1.040415e-06	2.358275e-06	3.468052e-06	-5.459914e+00	...	2	28778448	...	6.949645e-08
TCGA-A6-3807-01A-01W-0995-10	88	88	0	70	0	coding only	1	28834635	...	18	68	88	6.242493e-07	2.358275e-06	3.051885e-06	-5.515432e+00	...	1	28778448	...	3.474823e-08
TCGA-A6-3808-01A-01W-0995-10	117	117	0	96	0	coding only	1	28834635	...	20	93	116	6.936103e-07	3.225288e-06	4.022940e-06	-5.395456e+00	...	2	28778448	...	6.949645e-08
TCGA-A6-3809-01A-01W-0995-10	896	896	0	678	0	coding only	1	28834635	...	215	505	880	7.456311e-06	1.751366e-05	3.051885e-05	-4.515432e+00	...	160	28778448	...	5.559716e-06
TCGA-A6-3810-01A-01W-0995-10	119	119	0	93	0	coding only	1	28834635	...	26	90	117	9.016934e-07	3.121246e-06	4.057620e-06	-5.391729e+00	...	1	28778448	...	3.474823e-08
TCGA-A6-4105-01A-02D-1771-10	271	271	0	197	0	coding only	1	28834635	...	71	189	265	2.462317e-06	6.554617e-06	9.190337e-06	-5.036669e+00	...	5	28778448	...	1.737411e-07
TCGA-A6-5656-01A-21D-1835-10	161	161	0	108	0	coding only	1	28834635	...	53	96	158	1.838067e-06	3.329329e-06	5.479521e-06	-5.261257e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-5657-01A-01D-1650-10	275	275	0	203	0	coding only	1	28834635	...	71	189	268	2.462317e-06	6.554617e-06	9.294378e-06	-5.031780e+00	...	8	28778448	...	2.779858e-07
TCGA-A6-5659-01A-01D-1650-10	324	324	0	224	0	coding only	1	28834635	...	98	210	317	3.398690e-06	7.282908e-06	1.099372e-05	-4.958855e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-5660-01A-01D-1650-10	294	294	0	210	0	coding only	1	28834635	...	83	197	289	2.878483e-06	6.832062e-06	1.002267e-05	-4.999017e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-5661-01A-01D-1650-10	1508	1508	0	1146	0	coding only	1	28834635	...	355	859	1468	1.231158e-05	2.979056e-05	5.091100e-05	-4.293188e+00	...	254	28778448	...	8.826049e-06
TCGA-A6-5662-01A-01D-1650-10	216	216	0	154	0	coding only	1	28834635	...	61	141	211	2.115511e-06	4.889953e-06	7.317589e-06	-5.135632e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-5664-01A-21D-1835-10	98	98	0	75	0	coding only	1	28834635	...	23	65	97	7.976519e-07	2.254233e-06	3.364010e-06	-5.473143e+00	...	9	28778448	...	3.127340e-07
TCGA-A6-5665-01A-01D-1650-10	2258	2258	0	1773	0	coding only	1	28834635	...	480	1214	2203	1.664665e-05	4.210215e-05	7.640118e-05	-4.116900e+00	...	509	28778448	...	1.768685e-05
TCGA-A6-5666-01A-01D-1650-10	355	355	0	254	0	coding only	1	28834635	...	100	246	352	3.468052e-06	8.531407e-06	1.220754e-05	-4.913372e+00	...	6	28778448	...	2.084894e-07
TCGA-A6-6137-01A-11D-1771-10	154	154	0	112	0	coding only	1	28834635	...	42	107	154	1.456582e-06	3.710815e-06	5.340799e-06	-5.272394e+00	...	5	28778448	...	1.737411e-07
TCGA-A6-6138-01A-11D-1771-10	190	190	0	126	0	coding only	1	28834635	...	64	118	188	2.219553e-06	4.092301e-06	6.519937e-06	-5.185757e+00	...	6	28778448	...	2.084894e-07
TCGA-A6-6141-01A-11D-1771-10	1176	1176	0	870	0	coding only	1	28834635	...	298	839	1142	1.033479e-05	2.909695e-05	3.960515e-05	-4.402248e+00	...	5	28778448	...	1.737411e-07
TCGA-A6-6142-01A-11D-1771-10	136	136	0	95	0	coding only	1	28834635	...	41	85	134	1.421901e-06	2.947844e-06	4.647189e-06	-5.332810e+00	...	8	28778448	...	2.779858e-07
TCGA-A6-6648-01A-11D-1771-10	142	142	0	109	0	coding only	1	28834635	...	33	99	137	1.144457e-06	3.433371e-06	4.751231e-06	-5.323194e+00	...	5	28778448	...	1.737411e-07
TCGA-A6-6649-01A-11D-1771-10	197	197	0	138	0	coding only	1	28834635	...	59	130	193	2.046150e-06	4.508467e-06	6.693339e-06	-5.174357e+00	...	4	28778448	...	1.389929e-07
TCGA-A6-6651-01A-21D-1835-10	178	178	0	119	0	coding only	1	28834635	...	58	111	176	2.011470e-06	3.849537e-06	6.103771e-06	-5.214402e+00	...	7	28778448	...	2.432376e-07
TCGA-A6-6652-01A-11D-1771-10	151	151	0	111	0	coding only	1	28834635	...	40	101	148	1.387221e-06	3.502732e-06	5.132716e-06	-5.289653e+00	...	7	28778448	...	2.432376e-07
TCGA-A6-6653-01A-11D-1771-10	1273	1273	0	951	0	coding only	1	28834635	...	315	701	1242	1.092436e-05	2.431104e-05	4.307320e-05	-4.365793e+00	...	226	28778448	...	7.853099e-06
TCGA-A6-6654-01A-21D-1835-10	275	275	0	181	0	coding only	1	28834635	...	94	171	271	3.259968e-06	5.930368e-06	9.398420e-06	-5.026945e+00	...	6	28778448	...	2.084894e-07
TCGA-A6-6780-01A-11D-1835-10	1207	1207	0	914	0	coding only	1	28834635	...	283	674	1176	9.814586e-06	2.337467e-05	4.078429e-05	-4.389507e+00	...	219	28778448	...	7.609861e-06
TCGA-A6-6781-01A-22D-1924-10	2027	2027	0	1520	0	coding only	1	28834635	...	491	1182	1979	1.702813e-05	4.099237e-05	6.863274e-05	-4.163469e+00	...	306	28778448	...	1.063296e-05
TCGA-A6-6782-01A-11D-1835-10	204	204	0	143	0	coding only	1	28834635	...	60	132	197	2.080831e-06	4.577828e-06	6.832062e-06	-5.165448e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3489-01A-21D-1835-10	127	127	0	95	0	coding only	1	28834635	...	32	88	127	1.109776e-06	3.051885e-06	4.404425e-06	-5.356111e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3492-01A-01D-1408-10	2247	2247	0	1685	0	coding only	1	28834635	...	547	1280	2183	1.897024e-05	4.439106e-05	7.570756e-05	-4.120861e+00	...	356	28778448	...	1.237037e-05
TCGA-AA-3496-01A-21D-1835-10	368	368	0	265	0	coding only	1	28834635	...	102	251	363	3.537413e-06	8.704809e-06	1.258903e-05	-4.900008e+00	...	10	28778448	...	3.474823e-07
TCGA-AA-3502-01A-01D-1408-10	216	216	0	154	0	coding only	1	28834635	...	61	147	215	2.115511e-06	5.098036e-06	7.456311e-06	-5.127476e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3510-01A-01D-1408-10	3083	3083	0	2454	0	coding only	1	28834635	...	613	2382	3006	2.125916e-05	8.260899e-05	1.042496e-04	-3.981925e+00	...	11	28778448	...	3.822305e-07
TCGA-AA-3511-01A-21D-1835-10	160	160	0	123	0	coding only	1	28834635	...	34	117	154	1.179138e-06	4.057620e-06	5.340799e-06	-5.272394e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3514-01A-02W-0831-10	73	73	0	56	0	coding only	1	28834635	...	16	53	71	5.548882e-07	1.838067e-06	2.462317e-06	-5.608656e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3516-01A-02W-0833-10	915	915	0	680	0	coding only	1	28834635	...	234	650	902	8.115241e-06	2.254233e-05	3.128182e-05	-4.504708e+00	...	18	28778448	...	6.254681e-07
TCGA-AA-3517-01A-01W-0831-10	37	37	0	27	0	coding only	1	28834635	...	10	27	37	3.468052e-07	9.363739e-07	1.283179e-06	-5.891713e+00	...	0	28778448	...	0
TCGA-AA-3518-01A-02W-0833-10	553	553	0	402	0	coding only	1	28834635	...	146	376	542	5.063355e-06	1.303987e-05	1.879684e-05	-4.725915e+00	...	20	28778448	...	6.949645e-07
TCGA-AA-3519-01A-02W-0831-10	53	53	0	37	0	coding only	1	28834635	...	16	37	53	5.548882e-07	1.283179e-06	1.838067e-06	-5.735639e+00	...	0	28778448	...	0
TCGA-AA-3520-01A-01W-0831-10	68	68	0	54	0	coding only	1	28834635	...	14	53	67	4.855272e-07	1.838067e-06	2.323595e-06	-5.633840e+00	...	0	28778448	...	0
TCGA-AA-3521-01A-01W-0831-10	55	55	0	43	0	coding only	1	28834635	...	12	41	55	4.161662e-07	1.421901e-06	1.907428e-06	-5.719552e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3522-01A-01W-0831-10	58	58	0	41	0	coding only	1	28834635	...	17	41	58	5.895688e-07	1.421901e-06	2.011470e-06	-5.696486e+00	...	0	28778448	...	0
TCGA-AA-3524-01A-02W-0831-10	52	52	0	38	0	coding only	1	28834635	...	14	37	51	4.855272e-07	1.283179e-06	1.768706e-06	-5.752344e+00	...	0	28778448	...	0
TCGA-AA-3525-01A-02W-0833-10	611	611	0	457	0	coding only	1	28834635	...	152	421	604	5.271438e-06	1.460050e-05	2.094703e-05	-4.678878e+00	...	31	28778448	...	1.077195e-06
TCGA-AA-3526-01A-02W-0831-10	66	66	0	45	0	coding only	1	28834635	...	21	43	65	7.282908e-07	1.491262e-06	2.254233e-06	-5.647001e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3527-01A-01W-0831-10	89	89	0	65	0	coding only	1	28834635	...	24	63	88	8.323324e-07	2.184872e-06	3.051885e-06	-5.515432e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3529-01A-02W-0831-10	62	62	0	43	0	coding only	1	28834635	...	19	42	62	6.589298e-07	1.456582e-06	2.150192e-06	-5.667523e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3530-01A-01W-0995-10	83	83	0	65	0	coding only	1	28834635	...	17	63	81	5.895688e-07	2.184872e-06	2.809122e-06	-5.551429e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3531-01A-01W-0831-10	72	72	0	55	0	coding only	1	28834635	...	17	55	72	5.895688e-07	1.907428e-06	2.496997e-06	-5.602582e+00	...	0	28778448	...	0
TCGA-AA-3532-01A-01W-0831-10	41	41	0	31	0	coding only	1	28834635	...	10	28	41	3.468052e-07	9.710544e-07	1.421901e-06	-5.847131e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3534-01A-01W-0831-10	64	64	0	51	0	coding only	1	28834635	...	13	50	63	4.508467e-07	1.734026e-06	2.184872e-06	-5.660574e+00	...	0	28778448	...	0
TCGA-AA-3538-01A-01W-0831-10	46	46	0	32	0	coding only	1	28834635	...	14	31	46	4.855272e-07	1.075096e-06	1.595304e-06	-5.797157e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3542-01A-02W-0831-10	203	203	0	163	0	coding only	1	28834635	...	40	154	202	1.387221e-06	5.340799e-06	7.005464e-06	-5.154563e+00	...	8	28778448	...	2.779858e-07
TCGA-AA-3543-01A-01W-0833-10	235	235	0	193	0	coding only	1	28834635	...	41	181	230	1.421901e-06	6.277173e-06	7.976519e-06	-5.098187e+00	...	8	28778448	...	2.779858e-07
TCGA-AA-3544-01A-01W-0831-10	66	66	0	45	0	coding only	1	28834635	...	21	43	66	7.282908e-07	1.491262e-06	2.288914e-06	-5.640371e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3548-01A-01W-0831-10	40	40	0	30	0	coding only	1	28834635	...	10	28	39	3.468052e-07	9.710544e-07	1.352540e-06	-5.868850e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3549-01A-02W-0831-10	64	64	0	50	0	coding only	1	28834635	...	14	48	63	4.855272e-07	1.664665e-06	2.184872e-06	-5.660574e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3552-01A-01W-0831-10	61	61	0	44	0	coding only	1	28834635	...	17	44	61	5.895688e-07	1.525943e-06	2.115511e-06	-5.674585e+00	...	0	28778448	...	0
TCGA-AA-3553-01A-01W-0831-10	34	34	0	27	0	coding only	1	28834635	...	7	26	34	2.427636e-07	9.016934e-07	1.179138e-06	-5.928436e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3554-01A-01W-0833-10	324	324	0	236	0	coding only	1	28834635	...	87	234	323	3.017205e-06	8.115241e-06	1.120181e-05	-4.950712e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3555-01A-01W-0831-10	872	872	0	720	0	coding only	1	28834635	...	149	708	860	5.167397e-06	2.455380e-05	2.982524e-05	-4.525416e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3556-01A-01W-0831-10	43	43	0	28	0	coding only	1	28834635	...	15	28	43	5.202077e-07	9.710544e-07	1.491262e-06	-5.826446e+00	...	0	28778448	...	0
TCGA-AA-3558-01A-01W-0831-10	136	136	0	94	0	coding only	1	28834635	...	42	90	133	1.456582e-06	3.121246e-06	4.612509e-06	-5.336063e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3560-01A-01W-0831-10	58	58	0	46	0	coding only	1	28834635	...	12	45	58	4.161662e-07	1.560623e-06	2.011470e-06	-5.696486e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3561-01A-01W-0831-10	59	59	0	36	0	coding only	1	28834635	...	23	35	59	7.976519e-07	1.213818e-06	2.046150e-06	-5.689062e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3562-01A-02W-0831-10	48	48	0	32	0	coding only	1	28834635	...	16	31	48	5.548882e-07	1.075096e-06	1.664665e-06	-5.778673e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3655-01A-02D-1719-10	256	256	0	181	0	coding only	1	28834635	...	75	172	253	2.601039e-06	5.965049e-06	8.774170e-06	-5.056794e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-3660-01A-01D-1719-10	611	611	0	394	0	coding only	1	28834635	...	211	380	599	7.317589e-06	1.317860e-05	2.077363e-05	-4.682488e+00	...	8	28778448	...	2.779858e-07
TCGA-AA-3662-01A-01D-1719-10	404	404	0	293	0	coding only	1	28834635	...	110	283	400	3.814857e-06	9.814586e-06	1.387221e-05	-4.857854e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3663-01A-01D-1719-10	2409	2409	0	1848	0	coding only	1	28834635	...	548	1429	2359	1.900492e-05	4.955846e-05	8.181134e-05	-4.087187e+00	...	382	28778448	...	1.327382e-05
TCGA-AA-3664-01A-01W-0900-09	167	167	0	127	0	coding only	1	28834635	...	40	118	166	1.387221e-06	4.092301e-06	5.756966e-06	-5.239806e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3666-01A-02W-0900-09	152	152	0	126	0	coding only	1	28834635	...	26	123	151	9.016934e-07	4.265703e-06	5.236758e-06	-5.280938e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3667-01A-01W-0900-09	73	73	0	59	0	coding only	1	28834635	...	14	52	73	4.855272e-07	1.803387e-06	2.531678e-06	-5.596592e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3672-01A-01W-0900-09	1811	1810	1	1350	5.521811e-04	coding only	1	28834635	...	459	1170	1802	1.591836e-05	4.057620e-05	6.249429e-05	-4.204160e+00	...	165	28778448	...	5.733457e-06
TCGA-AA-3673-01A-01W-0900-09	81	81	0	65	0	coding only	1	28834635	...	16	60	78	5.548882e-07	2.080831e-06	2.705080e-06	-5.567820e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3678-01A-01W-0900-09	74	74	0	56	0	coding only	1	28834635	...	18	51	74	6.242493e-07	1.768706e-06	2.566358e-06	-5.590683e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3679-01A-02W-0900-09	78	78	0	57	0	coding only	1	28834635	...	21	52	77	7.282908e-07	1.803387e-06	2.670400e-06	-5.573424e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3680-01A-01W-0900-09	118	118	0	92	0	coding only	1	28834635	...	26	85	116	9.016934e-07	2.947844e-06	4.022940e-06	-5.395456e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3681-01A-01W-0900-09	123	123	0	96	0	coding only	1	28834635	...	27	94	123	9.363739e-07	3.259968e-06	4.265703e-06	-5.370009e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3684-01A-02W-0900-09	125	125	0	93	0	coding only	1	28834635	...	32	92	125	1.109776e-06	3.190607e-06	4.335064e-06	-5.363004e+00	...	0	28778448	...	0
TCGA-AA-3685-01A-02W-0900-09	80	80	0	66	0	coding only	1	28834635	...	14	61	79	4.855272e-07	2.115511e-06	2.739761e-06	-5.562287e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3688-01A-01W-0900-09	62	62	0	49	0	coding only	1	28834635	...	13	48	62	4.508467e-07	1.664665e-06	2.150192e-06	-5.667523e+00	...	0	28778448	...	0
TCGA-AA-3692-01A-01W-0900-09	64	64	0	52	0	coding only	1	28834635	...	12	47	64	4.161662e-07	1.629984e-06	2.219553e-06	-5.653734e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3693-01A-01W-0900-09	143	143	0	108	0	coding only	1	28834635	...	35	101	141	1.213818e-06	3.502732e-06	4.889953e-06	-5.310695e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3695-01A-01W-0900-09	174	174	0	130	0	coding only	1	28834635	...	44	126	173	1.525943e-06	4.369745e-06	5.999729e-06	-5.221868e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3696-01A-01W-0900-09	97	97	0	74	0	coding only	1	28834635	...	23	68	96	7.976519e-07	2.358275e-06	3.329329e-06	-5.477643e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3697-01A-01D-1719-10	491	491	0	346	0	coding only	1	28834635	...	142	328	484	4.924633e-06	1.137521e-05	1.678537e-05	-4.775069e+00	...	14	28778448	...	4.864752e-07
TCGA-AA-3710-01A-01W-0995-10	1335	1335	0	962	0	coding only	1	28834635	...	372	910	1325	1.290115e-05	3.155927e-05	4.595168e-05	-4.337699e+00	...	37	28778448	...	1.285684e-06
TCGA-AA-3712-01A-21D-1719-10	439	439	0	306	0	coding only	1	28834635	...	130	294	429	4.508467e-06	1.019607e-05	1.487794e-05	-4.827457e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3713-01A-21D-1719-10	1594	1594	0	1235	0	coding only	1	28834635	...	355	936	1571	1.231158e-05	3.246096e-05	5.448309e-05	-4.263738e+00	...	280	28778448	...	9.729503e-06
TCGA-AA-3715-01A-01W-0900-09	1944	1944	0	1459	0	coding only	1	28834635	...	480	1339	1917	1.664665e-05	4.643721e-05	6.648255e-05	-4.177292e+00	...	90	28778448	...	3.127340e-06
TCGA-AA-3811-01A-01W-0995-10	1091	1091	0	803	0	coding only	1	28834635	...	282	734	1075	9.779905e-06	2.545550e-05	3.728155e-05	-4.428506e+00	...	55	28778448	...	1.911152e-06
TCGA-AA-3812-01A-01W-0900-09	114	114	0	80	0	coding only	1	28834635	...	34	78	114	1.179138e-06	2.705080e-06	3.953579e-06	-5.403010e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3814-01A-01W-0900-09	109	108	1	74	9.174312e-03	coding only	1	28834635	...	34	71	107	1.179138e-06	2.462317e-06	3.710815e-06	-5.430531e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3815-01A-01W-0995-10	1286	1286	0	978	0	coding only	1	28834635	...	296	778	1249	1.026543e-05	2.698144e-05	4.331596e-05	-4.363352e+00	...	175	28778448	...	6.080939e-06
TCGA-AA-3818-01A-01W-0900-09	139	139	0	101	0	coding only	1	28834635	...	38	99	139	1.317860e-06	3.433371e-06	4.820592e-06	-5.316900e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3819-01A-01W-0900-09	177	177	0	137	0	coding only	1	28834635	...	39	130	175	1.352540e-06	4.508467e-06	6.069090e-06	-5.216876e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-3821-01A-01W-0995-10	814	814	0	621	0	coding only	1	28834635	...	191	512	809	6.623978e-06	1.775642e-05	2.805654e-05	-4.551966e+00	...	102	28778448	...	3.544319e-06
TCGA-AA-3831-01A-01W-0900-09	114	114	0	93	0	coding only	1	28834635	...	21	91	114	7.282908e-07	3.155927e-06	3.953579e-06	-5.403010e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3833-01A-01W-0900-09	535	535	0	374	0	coding only	1	28834635	...	160	361	533	5.548882e-06	1.251967e-05	1.848471e-05	-4.733187e+00	...	11	28778448	...	3.822305e-07
TCGA-AA-3837-01A-01W-0900-09	148	148	0	103	0	coding only	1	28834635	...	45	99	147	1.560623e-06	3.433371e-06	5.098036e-06	-5.292597e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3842-01A-01W-0995-10	84	84	0	56	0	coding only	1	28834635	...	28	53	84	9.710544e-07	1.838067e-06	2.913163e-06	-5.535635e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3844-01A-01W-0995-10	112	112	0	81	0	coding only	1	28834635	...	31	79	112	1.075096e-06	2.739761e-06	3.884218e-06	-5.410696e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3845-01A-01W-0995-10	881	881	0	650	0	coding only	1	28834635	...	229	602	874	7.941838e-06	2.087767e-05	3.031077e-05	-4.518403e+00	...	38	28778448	...	1.320433e-06
TCGA-AA-3846-01A-01W-0995-10	94	93	1	69	1.063830e-02	coding only	1	28834635	...	24	68	93	8.323324e-07	2.358275e-06	3.225288e-06	-5.491432e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3848-01A-01W-0900-09	152	152	0	105	0	coding only	1	28834635	...	47	103	152	1.629984e-06	3.572093e-06	5.271438e-06	-5.278071e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3850-01A-01W-0995-10	111	111	0	76	0	coding only	1	28834635	...	34	73	109	1.179138e-06	2.531678e-06	3.780176e-06	-5.422488e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3851-01A-01W-0995-10	96	96	0	69	0	coding only	1	28834635	...	27	63	96	9.363739e-07	2.184872e-06	3.329329e-06	-5.477643e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3852-01A-01W-0900-09	140	140	0	106	0	coding only	1	28834635	...	32	102	138	1.109776e-06	3.537413e-06	4.785911e-06	-5.320035e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3854-01A-01W-0900-09	146	146	0	107	0	coding only	1	28834635	...	39	105	146	1.352540e-06	3.641454e-06	5.063355e-06	-5.295562e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3855-01A-01W-0995-10	134	134	0	99	0	coding only	1	28834635	...	35	95	134	1.213818e-06	3.294649e-06	4.647189e-06	-5.332810e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3856-01A-01W-0900-09	62	62	0	47	0	coding only	1	28834635	...	15	43	61	5.202077e-07	1.491262e-06	2.115511e-06	-5.674585e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3858-01A-01W-0900-09	63	63	0	44	0	coding only	1	28834635	...	19	36	62	6.589298e-07	1.248499e-06	2.150192e-06	-5.667523e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3860-01A-02W-0900-09	50	50	0	36	0	coding only	1	28834635	...	14	32	50	4.855272e-07	1.109776e-06	1.734026e-06	-5.760944e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3861-01A-01W-0995-10	266	266	0	176	0	coding only	1	28834635	...	88	166	261	3.051885e-06	5.756966e-06	9.051614e-06	-5.043274e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3864-01A-01W-0995-10	2740	2739	1	1946	3.649635e-04	coding only	1	28834635	...	784	1873	2716	2.718952e-05	6.495661e-05	9.419228e-05	-4.025985e+00	...	43	28778448	...	1.494174e-06
TCGA-AA-3866-01A-01W-0995-10	122	122	0	87	0	coding only	1	28834635	...	35	84	121	1.213818e-06	2.913163e-06	4.196342e-06	-5.377129e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3867-01A-01W-0995-10	88	88	0	72	0	coding only	1	28834635	...	16	68	88	5.548882e-07	2.358275e-06	3.051885e-06	-5.515432e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3869-01A-01W-0995-10	80	80	0	55	0	coding only	1	28834635	...	22	54	77	7.629713e-07	1.872748e-06	2.670400e-06	-5.573424e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3870-01A-01W-0995-10	123	123	0	92	0	coding only	1	28834635	...	31	88	123	1.075096e-06	3.051885e-06	4.265703e-06	-5.370009e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3872-01A-01W-0995-10	64	64	0	44	0	coding only	1	28834635	...	20	38	64	6.936103e-07	1.317860e-06	2.219553e-06	-5.653734e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-3875-01A-01W-0900-09	125	125	0	99	0	coding only	1	28834635	...	26	97	124	9.016934e-07	3.364010e-06	4.300384e-06	-5.366493e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3877-01A-01W-0995-10	1087	1087	0	757	0	coding only	1	28834635	...	329	712	1082	1.140989e-05	2.469253e-05	3.752432e-05	-4.425687e+00	...	39	28778448	...	1.355181e-06
TCGA-AA-3930-01A-01W-0995-10	163	163	0	112	0	coding only	1	28834635	...	51	104	163	1.768706e-06	3.606774e-06	5.652924e-06	-5.247727e+00	...	8	28778448	...	2.779858e-07
TCGA-AA-3939-01A-01W-0995-10	120	120	0	97	0	coding only	1	28834635	...	22	92	119	7.629713e-07	3.190607e-06	4.126981e-06	-5.384367e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3941-01A-01W-0995-10	111	111	0	92	0	coding only	1	28834635	...	19	85	111	6.589298e-07	2.947844e-06	3.849537e-06	-5.414591e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3947-01A-01W-0995-10	1623	1623	0	1212	0	coding only	1	28834635	...	404	1038	1599	1.401093e-05	3.599837e-05	5.545414e-05	-4.256066e+00	...	148	28778448	...	5.142737e-06
TCGA-AA-3949-01A-01W-0995-10	899	899	0	652	0	coding only	1	28834635	...	247	624	894	8.566087e-06	2.164064e-05	3.100438e-05	-4.508577e+00	...	19	28778448	...	6.602163e-07
TCGA-AA-3950-01A-02W-0995-10	1396	1396	0	1033	0	coding only	1	28834635	...	354	869	1363	1.227690e-05	3.013737e-05	4.726954e-05	-4.325419e+00	...	140	28778448	...	4.864752e-06
TCGA-AA-3952-01A-01W-0995-10	85	85	0	62	0	coding only	1	28834635	...	23	53	84	7.976519e-07	1.838067e-06	2.913163e-06	-5.535635e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3955-01A-02W-0995-10	124	124	0	97	0	coding only	1	28834635	...	27	91	123	9.363739e-07	3.155927e-06	4.265703e-06	-5.370009e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3956-01A-02W-0995-10	136	136	0	109	0	coding only	1	28834635	...	27	103	136	9.363739e-07	3.572093e-06	4.716550e-06	-5.326376e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-3966-01A-01W-1073-09	1156	1156	0	879	0	coding only	1	28834635	...	277	764	1146	9.606503e-06	2.649591e-05	3.974387e-05	-4.400730e+00	...	103	28778448	...	3.579067e-06
TCGA-AA-3968-01A-01W-0995-10	247	247	0	190	0	coding only	1	28834635	...	55	181	242	1.907428e-06	6.277173e-06	8.392685e-06	-5.076099e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-3971-01A-01W-0995-10	73	73	0	57	0	coding only	1	28834635	...	16	41	72	5.548882e-07	1.421901e-06	2.496997e-06	-5.602582e+00	...	15	28778448	...	5.212234e-07
TCGA-AA-3972-01A-01W-0995-10	115	115	0	79	0	coding only	1	28834635	...	36	71	114	1.248499e-06	2.462317e-06	3.953579e-06	-5.403010e+00	...	7	28778448	...	2.432376e-07
TCGA-AA-3973-01A-01W-0995-10	82	82	0	64	0	coding only	1	28834635	...	18	59	82	6.242493e-07	2.046150e-06	2.843802e-06	-5.546101e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-3975-01A-01W-0995-10	122	122	0	96	0	coding only	1	28834635	...	26	90	121	9.016934e-07	3.121246e-06	4.196342e-06	-5.377129e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-3976-01A-01W-0995-10	95	95	0	68	0	coding only	1	28834635	...	26	63	93	9.016934e-07	2.184872e-06	3.225288e-06	-5.491432e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-3977-01A-01W-0995-10	3658	3655	3	2942	8.201203e-04	coding only	1	28834635	...	707	2908	3633	2.451912e-05	1.008509e-04	1.259943e-04	-3.899649e+00	...	10	28778448	...	3.474823e-07
TCGA-AA-3979-01A-01W-0995-10	150	150	0	116	0	coding only	1	28834635	...	34	99	147	1.179138e-06	3.433371e-06	5.098036e-06	-5.292597e+00	...	14	28778448	...	4.864752e-07
TCGA-AA-3980-01A-02W-0995-10	92	92	0	78	0	coding only	1	28834635	...	14	58	91	4.855272e-07	2.011470e-06	3.155927e-06	-5.500873e+00	...	18	28778448	...	6.254681e-07
TCGA-AA-3982-01A-02W-0995-10	106	106	0	82	0	coding only	1	28834635	...	23	81	105	7.976519e-07	2.809122e-06	3.641454e-06	-5.438725e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-3984-01A-02W-0995-10	4040	4037	3	3204	7.425743e-04	coding only	1	28834635	...	826	3174	4013	2.864611e-05	1.100760e-04	1.391729e-04	-3.856445e+00	...	8	28778448	...	2.779858e-07
TCGA-AA-3986-01A-02W-0995-10	87	87	0	60	0	coding only	1	28834635	...	27	56	86	9.363739e-07	1.942109e-06	2.982524e-06	-5.525416e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-3989-01A-01W-0995-10	122	122	0	94	0	coding only	1	28834635	...	28	76	119	9.710544e-07	2.635719e-06	4.126981e-06	-5.384367e+00	...	14	28778448	...	4.864752e-07
TCGA-AA-3994-01A-01W-1073-09	192	192	0	142	0	coding only	1	28834635	...	50	131	189	1.734026e-06	4.543148e-06	6.554617e-06	-5.183453e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-A004-01A-01W-A00E-09	66	66	0	52	0	coding only	1	28834635	...	14	50	66	4.855272e-07	1.734026e-06	2.288914e-06	-5.640371e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A00A-01A-01W-A005-10	430	430	0	318	0	coding only	1	28834635	...	110	277	419	3.814857e-06	9.606503e-06	1.453114e-05	-4.837700e+00	...	32	28778448	...	1.111943e-06
TCGA-AA-A00D-01A-01W-A005-10	77	77	0	55	0	coding only	1	28834635	...	20	53	73	6.936103e-07	1.838067e-06	2.531678e-06	-5.596592e+00	...	0	28778448	...	0
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TCGA-AA-A00N-01A-02W-A00E-09	4445	4444	1	3511	2.249719e-04	coding only	1	28834635	...	930	3477	4416	3.225288e-05	1.205842e-04	1.531492e-04	-3.814885e+00	...	3	28778448	...	1.042447e-07
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TCGA-AA-A00Q-01A-01W-A005-10	36	36	0	23	0	coding only	1	28834635	...	13	23	36	4.508467e-07	7.976519e-07	1.248499e-06	-5.903612e+00	...	0	28778448	...	0
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TCGA-AA-A00U-01A-01W-A005-10	86	86	0	63	0	coding only	1	28834635	...	23	61	85	7.976519e-07	2.115511e-06	2.947844e-06	-5.530496e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-A00W-01A-01W-A005-10	27	27	0	23	0	coding only	1	28834635	...	4	21	27	1.387221e-07	7.282908e-07	9.363739e-07	-6.028551e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A00Z-01A-01W-A005-10	42	42	0	28	0	coding only	1	28834635	...	14	28	42	4.855272e-07	9.710544e-07	1.456582e-06	-5.836665e+00	...	0	28778448	...	0
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TCGA-AA-A017-01A-01W-A00E-09	61	61	0	46	0	coding only	1	28834635	...	15	43	61	5.202077e-07	1.491262e-06	2.115511e-06	-5.674585e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-A01D-01A-01W-A00E-09	163	163	0	120	0	coding only	1	28834635	...	41	119	161	1.421901e-06	4.126981e-06	5.583563e-06	-5.253089e+00	...	0	28778448	...	0
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TCGA-AA-A01G-01A-01W-A005-10	73	73	0	50	0	coding only	1	28834635	...	22	48	71	7.629713e-07	1.664665e-06	2.462317e-06	-5.608656e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-A01I-01A-02W-A00E-09	98	98	0	83	0	coding only	1	28834635	...	15	79	97	5.202077e-07	2.739761e-06	3.364010e-06	-5.473143e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A01K-01A-01W-A00E-09	159	159	0	118	0	coding only	1	28834635	...	40	114	158	1.387221e-06	3.953579e-06	5.479521e-06	-5.261257e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-A01P-01A-21W-A096-10	514	514	0	383	0	coding only	1	28834635	...	131	364	510	4.543148e-06	1.262371e-05	1.768706e-05	-4.752344e+00	...	14	28778448	...	4.864752e-07
TCGA-AA-A01Q-01A-01W-A005-10	774	774	0	575	0	coding only	1	28834635	...	197	532	763	6.832062e-06	1.845003e-05	2.646123e-05	-4.577390e+00	...	34	28778448	...	1.181440e-06
TCGA-AA-A01R-01A-21W-A096-10	1727	1726	1	1234	5.790388e-04	coding only	1	28834635	...	489	1192	1709	1.695877e-05	4.133917e-05	5.926900e-05	-4.227172e+00	...	22	28778448	...	7.644610e-07
TCGA-AA-A01S-01A-21W-A096-10	63	63	0	44	0	coding only	1	28834635	...	19	43	63	6.589298e-07	1.491262e-06	2.184872e-06	-5.660574e+00	...	1	28778448	...	3.474823e-08
TCGA-AA-A01T-01A-21W-A096-10	95	95	0	76	0	coding only	1	28834635	...	19	74	95	6.589298e-07	2.566358e-06	3.294649e-06	-5.482191e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A01V-01A-23W-A096-10	133	133	0	93	0	coding only	1	28834635	...	39	89	132	1.352540e-06	3.086566e-06	4.577828e-06	-5.339341e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-A01X-01A-21W-A096-10	65	65	0	46	0	coding only	1	28834635	...	18	43	63	6.242493e-07	1.491262e-06	2.184872e-06	-5.660574e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A01Z-01A-11W-A096-10	106	106	0	77	0	coding only	1	28834635	...	29	71	106	1.005735e-06	2.462317e-06	3.676135e-06	-5.434609e+00	...	6	28778448	...	2.084894e-07
TCGA-AA-A022-01A-21W-A096-10	1281	1280	1	912	7.806401e-04	coding only	1	28834635	...	366	821	1268	1.269307e-05	2.847270e-05	4.397489e-05	-4.356795e+00	...	77	28778448	...	2.675613e-06
TCGA-AA-A024-01A-02W-A00E-09	82	82	0	58	0	coding only	1	28834635	...	24	54	82	8.323324e-07	1.872748e-06	2.843802e-06	-5.546101e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A029-01A-01W-A00E-09	108	108	0	80	0	coding only	1	28834635	...	28	73	106	9.710544e-07	2.531678e-06	3.676135e-06	-5.434609e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-A02F-01A-01W-A00E-09	64	64	0	46	0	coding only	1	28834635	...	18	40	64	6.242493e-07	1.387221e-06	2.219553e-06	-5.653734e+00	...	5	28778448	...	1.737411e-07
TCGA-AA-A02H-01A-01W-A00E-09	74	74	0	56	0	coding only	1	28834635	...	17	53	73	5.895688e-07	1.838067e-06	2.531678e-06	-5.596592e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-A02J-01A-01W-A00E-09	135	135	0	102	0	coding only	1	28834635	...	33	88	134	1.144457e-06	3.051885e-06	4.647189e-06	-5.332810e+00	...	12	28778448	...	4.169787e-07
TCGA-AA-A02K-01A-21W-A096-10	211	211	0	154	0	coding only	1	28834635	...	56	144	209	1.942109e-06	4.993994e-06	7.248228e-06	-5.139768e+00	...	9	28778448	...	3.127340e-07
TCGA-AA-A02O-01A-21W-A096-10	164	164	0	135	0	coding only	1	28834635	...	29	128	163	1.005735e-06	4.439106e-06	5.652924e-06	-5.247727e+00	...	3	28778448	...	1.042447e-07
TCGA-AA-A02W-01A-01W-A00E-09	114	114	0	83	0	coding only	1	28834635	...	31	79	113	1.075096e-06	2.739761e-06	3.918898e-06	-5.406836e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A02Y-01A-43W-A096-10	125	125	0	105	0	coding only	1	28834635	...	20	97	123	6.936103e-07	3.364010e-06	4.265703e-06	-5.370009e+00	...	4	28778448	...	1.389929e-07
TCGA-AA-A03F-01A-11W-A096-10	133	133	0	103	0	coding only	1	28834635	...	30	101	133	1.040415e-06	3.502732e-06	4.612509e-06	-5.336063e+00	...	2	28778448	...	6.949645e-08
TCGA-AA-A03J-01A-21W-A096-10	92	92	0	63	0	coding only	1	28834635	...	29	62	92	1.005735e-06	2.150192e-06	3.190607e-06	-5.496127e+00	...	1	28778448	...	3.474823e-08
TCGA-AD-5900-01A-11D-1650-10	1683	1683	0	1290	0	coding only	1	28834635	...	386	929	1649	1.338668e-05	3.221820e-05	5.718817e-05	-4.242694e+00	...	334	28778448	...	1.160591e-05
TCGA-AD-6548-01A-11D-1835-10	147	147	0	96	0	coding only	1	28834635	...	51	89	146	1.768706e-06	3.086566e-06	5.063355e-06	-5.295562e+00	...	6	28778448	...	2.084894e-07
TCGA-AD-6888-01A-11D-1924-10	141	141	0	108	0	coding only	1	28834635	...	31	96	136	1.075096e-06	3.329329e-06	4.716550e-06	-5.326376e+00	...	9	28778448	...	3.127340e-07
TCGA-AD-6889-01A-11D-1924-10	2091	2091	0	1594	0	coding only	1	28834635	...	483	1145	2027	1.675069e-05	3.970919e-05	7.029740e-05	-4.153061e+00	...	399	28778448	...	1.386454e-05
TCGA-AD-6890-01A-11D-1924-10	173	173	0	131	0	coding only	1	28834635	...	40	121	169	1.387221e-06	4.196342e-06	5.861007e-06	-5.232028e+00	...	8	28778448	...	2.779858e-07
TCGA-AD-6895-01A-11D-1924-10	1684	1684	0	1202	0	coding only	1	28834635	...	474	998	1650	1.643856e-05	3.461115e-05	5.722285e-05	-4.242431e+00	...	178	28778448	...	6.185184e-06
TCGA-AD-6899-01A-11D-1924-10	202	202	0	146	0	coding only	1	28834635	...	55	138	198	1.907428e-06	4.785911e-06	6.866742e-06	-5.163249e+00	...	5	28778448	...	1.737411e-07
TCGA-AD-6901-01A-11D-1924-10	316	316	0	230	0	coding only	1	28834635	...	83	214	306	2.878483e-06	7.421630e-06	1.061224e-05	-4.974193e+00	...	9	28778448	...	3.127340e-07
TCGA-AD-6963-01A-11D-1924-10	168	168	0	121	0	coding only	1	28834635	...	47	115	165	1.629984e-06	3.988259e-06	5.722285e-06	-5.242431e+00	...	3	28778448	...	1.042447e-07
TCGA-AD-6964-01A-11D-1924-10	1399	1399	0	1063	0	coding only	1	28834635	...	329	879	1372	1.140989e-05	3.048417e-05	4.758167e-05	-4.322560e+00	...	164	28778448	...	5.698709e-06
TCGA-AD-6965-01A-11D-1924-10	163	163	0	111	0	coding only	1	28834635	...	52	103	161	1.803387e-06	3.572093e-06	5.583563e-06	-5.253089e+00	...	6	28778448	...	2.084894e-07
TCGA-AF-2687-01A-02D-1733-10	198	198	0	149	0	coding only	1	28834635	...	49	139	194	1.699345e-06	4.820592e-06	6.728020e-06	-5.172113e+00	...	6	28778448	...	2.084894e-07
TCGA-AF-2689-01A-01W-0831-10	63	63	0	44	0	coding only	1	28834635	...	19	43	63	6.589298e-07	1.491262e-06	2.184872e-06	-5.660574e+00	...	1	28778448	...	3.474823e-08
TCGA-AF-2691-01A-01W-0831-10	72	72	0	58	0	coding only	1	28834635	...	14	58	72	4.855272e-07	2.011470e-06	2.496997e-06	-5.602582e+00	...	0	28778448	...	0
TCGA-AF-2692-01A-01W-0831-10	40	40	0	30	0	coding only	1	28834635	...	10	26	38	3.468052e-07	9.016934e-07	1.317860e-06	-5.880131e+00	...	2	28778448	...	6.949645e-08
TCGA-AF-2693-01A-02D-1733-10	254	254	0	189	0	coding only	1	28834635	...	65	184	253	2.254233e-06	6.381215e-06	8.774170e-06	-5.056794e+00	...	4	28778448	...	1.389929e-07
TCGA-AF-3400-01A-01W-0831-10	30	30	0	18	0	coding only	1	28834635	...	12	18	30	4.161662e-07	6.242493e-07	1.040415e-06	-5.982793e+00	...	0	28778448	...	0
TCGA-AF-3913-01A-02W-1073-09	114	114	0	84	0	coding only	1	28834635	...	30	80	114	1.040415e-06	2.774441e-06	3.953579e-06	-5.403010e+00	...	3	28778448	...	1.042447e-07
TCGA-AF-4110-01A-02D-1733-10	137	137	0	98	0	coding only	1	28834635	...	38	92	136	1.317860e-06	3.190607e-06	4.716550e-06	-5.326376e+00	...	6	28778448	...	2.084894e-07
TCGA-AF-5654-01A-01D-1657-10	185	185	0	141	0	coding only	1	28834635	...	42	128	175	1.456582e-06	4.439106e-06	6.069090e-06	-5.216876e+00	...	5	28778448	...	1.737411e-07
TCGA-AF-6136-01A-11D-1826-10	200	200	0	138	0	coding only	1	28834635	...	61	131	197	2.115511e-06	4.543148e-06	6.832062e-06	-5.165448e+00	...	5	28778448	...	1.737411e-07
TCGA-AF-6655-01A-11D-1826-10	141	141	0	113	0	coding only	1	28834635	...	28	105	140	9.710544e-07	3.641454e-06	4.855272e-06	-5.313786e+00	...	7	28778448	...	2.432376e-07
TCGA-AF-6672-01A-11D-1826-10	149	149	0	105	0	coding only	1	28834635	...	43	100	146	1.491262e-06	3.468052e-06	5.063355e-06	-5.295562e+00	...	3	28778448	...	1.042447e-07
TCGA-AG-3574-01A-01W-0831-10	41	41	0	30	0	coding only	1	28834635	...	11	29	41	3.814857e-07	1.005735e-06	1.421901e-06	-5.847131e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3575-01A-01W-0831-10	51	51	0	43	0	coding only	1	28834635	...	8	42	51	2.774441e-07	1.456582e-06	1.768706e-06	-5.752344e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3578-01A-01W-0831-10	26	26	0	23	0	coding only	1	28834635	...	3	23	26	1.040415e-07	7.976519e-07	9.016934e-07	-6.044941e+00	...	0	28778448	...	0
TCGA-AG-3580-01A-01W-0831-10	42	42	0	31	0	coding only	1	28834635	...	11	30	42	3.814857e-07	1.040415e-06	1.456582e-06	-5.836665e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3581-01A-01W-0831-10	54	54	0	37	0	coding only	1	28834635	...	17	35	53	5.895688e-07	1.213818e-06	1.838067e-06	-5.735639e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3582-01A-01W-0831-10	35	35	0	29	0	coding only	1	28834635	...	5	28	34	1.734026e-07	9.710544e-07	1.179138e-06	-5.928436e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3583-01A-01W-0831-10	59	59	0	45	0	coding only	1	28834635	...	13	43	58	4.508467e-07	1.491262e-06	2.011470e-06	-5.696486e+00	...	2	28778448	...	6.949645e-08
TCGA-AG-3584-01A-01W-0831-10	33	33	0	28	0	coding only	1	28834635	...	5	27	33	1.734026e-07	9.363739e-07	1.144457e-06	-5.941401e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3586-01A-02W-0831-10	68	68	0	36	0	coding only	1	28834635	...	32	35	68	1.109776e-06	1.213818e-06	2.358275e-06	-5.627406e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3587-01A-01W-0831-10	68	68	0	52	0	coding only	1	28834635	...	16	49	66	5.548882e-07	1.699345e-06	2.288914e-06	-5.640371e+00	...	1	28778448	...	3.474823e-08
TCGA-AG-3593-01A-01W-0831-10	76	76	0	58	0	coding only	1	28834635	...	18	58	76	6.242493e-07	2.011470e-06	2.635719e-06	-5.579101e+00	...	0	28778448	...	0
TCGA-AG-3594-01A-02W-0831-10	42	42	0	28	0	coding only	1	28834635	...	14	26	42	4.855272e-07	9.016934e-07	1.456582e-06	-5.836665e+00	...	2	28778448	...	6.949645e-08
TCGA-AG-3598-01A-01W-0833-10	72	72	0	55	0	coding only	1	28834635	...	17	55	72	5.895688e-07	1.907428e-06	2.496997e-06	-5.602582e+00	...	0	28778448	...	0
TCGA-AG-3599-01A-02W-0833-10	67	67	0	53	0	coding only	1	28834635	...	14	52	67	4.855272e-07	1.803387e-06	2.323595e-06	-5.633840e+00	...	1	28778448	...	3.474823e-08
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TCGA-AZ-6607-01A-11D-1835-10	146	146	0	105	0	coding only	1	28834635	...	41	102	144	1.421901e-06	3.537413e-06	4.993994e-06	-5.301552e+00	...	1	28778448	...	3.474823e-08
TCGA-AZ-6608-01A-11D-1835-10	369	369	0	258	0	coding only	1	28834635	...	109	248	364	3.780176e-06	8.600768e-06	1.262371e-05	-4.898813e+00	...	7	28778448	...	2.432376e-07
TCGA-CA-5254-01A-21D-1835-10	208	208	0	152	0	coding only	1	28834635	...	54	141	202	1.872748e-06	4.889953e-06	7.005464e-06	-5.154563e+00	...	7	28778448	...	2.432376e-07
TCGA-CA-5255-01A-11D-1835-10	81	81	0	61	0	coding only	1	28834635	...	19	56	80	6.589298e-07	1.942109e-06	2.774441e-06	-5.556824e+00	...	5	28778448	...	1.737411e-07
TCGA-CA-5796-01A-01D-1650-10	126	126	0	86	0	coding only	1	28834635	...	39	79	123	1.352540e-06	2.739761e-06	4.265703e-06	-5.370009e+00	...	5	28778448	...	1.737411e-07
TCGA-CA-5797-01A-01D-1650-10	156	156	0	109	0	coding only	1	28834635	...	47	99	153	1.629984e-06	3.433371e-06	5.306119e-06	-5.275223e+00	...	7	28778448	...	2.432376e-07
TCGA-CA-6715-01A-21D-1835-10	176	176	0	125	0	coding only	1	28834635	...	51	113	174	1.768706e-06	3.918898e-06	6.034410e-06	-5.219365e+00	...	10	28778448	...	3.474823e-07
TCGA-CA-6716-01A-11D-1835-10	294	294	0	208	0	coding only	1	28834635	...	80	194	284	2.774441e-06	6.728020e-06	9.849266e-06	-5.006596e+00	...	10	28778448	...	3.474823e-07
TCGA-CA-6717-01A-11D-1835-10	8493	8493	0	6887	0	coding only	1	28834635	...	1570	6698	8287	5.444841e-05	2.322901e-04	2.873974e-04	-3.541517e+00	...	19	28778448	...	6.602163e-07
TCGA-CA-6718-01A-11D-1835-10	3153	3153	0	2569	0	coding only	1	28834635	...	570	2493	3074	1.976789e-05	8.645852e-05	1.066079e-04	-3.972211e+00	...	11	28778448	...	3.822305e-07
TCGA-CA-6719-01A-11D-1835-10	193	193	0	146	0	coding only	1	28834635	...	47	131	186	1.629984e-06	4.543148e-06	6.450576e-06	-5.190402e+00	...	8	28778448	...	2.779858e-07
TCGA-CI-6619-01B-11D-1826-10	150	150	0	104	0	coding only	1	28834635	...	46	94	146	1.595304e-06	3.259968e-06	5.063355e-06	-5.295562e+00	...	6	28778448	...	2.084894e-07
TCGA-CI-6620-01A-11D-1826-10	131	131	0	94	0	coding only	1	28834635	...	37	83	129	1.283179e-06	2.878483e-06	4.473786e-06	-5.349325e+00	...	9	28778448	...	3.127340e-07
TCGA-CI-6621-01A-11D-1826-10	120	120	0	90	0	coding only	1	28834635	...	29	87	119	1.005735e-06	3.017205e-06	4.126981e-06	-5.384367e+00	...	3	28778448	...	1.042447e-07
TCGA-CI-6622-01A-11D-1826-10	179	179	0	126	0	coding only	1	28834635	...	52	117	174	1.803387e-06	4.057620e-06	6.034410e-06	-5.219365e+00	...	5	28778448	...	1.737411e-07
TCGA-CI-6624-01C-11D-1826-10	310	310	0	225	0	coding only	1	28834635	...	84	217	306	2.913163e-06	7.525672e-06	1.061224e-05	-4.974193e+00	...	5	28778448	...	1.737411e-07
TCGA-CK-4947-01B-11D-1650-10	245	245	0	172	0	coding only	1	28834635	...	71	161	239	2.462317e-06	5.583563e-06	8.288643e-06	-5.081517e+00	...	7	28778448	...	2.432376e-07
TCGA-CK-4948-01B-11D-1650-10	264	264	0	186	0	coding only	1	28834635	...	77	174	258	2.670400e-06	6.034410e-06	8.947573e-06	-5.048295e+00	...	7	28778448	...	2.432376e-07
TCGA-CK-4950-01A-01D-1719-10	459	459	0	329	0	coding only	1	28834635	...	129	318	454	4.473786e-06	1.102840e-05	1.574495e-05	-4.802859e+00	...	7	28778448	...	2.432376e-07
TCGA-CK-4952-01A-01D-1719-10	672	672	0	482	0	coding only	1	28834635	...	188	473	669	6.519937e-06	1.640388e-05	2.320126e-05	-4.634488e+00	...	8	28778448	...	2.779858e-07
TCGA-CK-5912-01A-11D-1650-10	176	176	0	122	0	coding only	1	28834635	...	54	113	174	1.872748e-06	3.918898e-06	6.034410e-06	-5.219365e+00	...	7	28778448	...	2.432376e-07
TCGA-CK-5913-01A-11D-1650-10	1009	1009	0	759	0	coding only	1	28834635	...	244	548	984	8.462046e-06	1.900492e-05	3.412563e-05	-4.466919e+00	...	192	28778448	...	6.671659e-06
TCGA-CK-5914-01A-11D-1650-10	285	285	0	219	0	coding only	1	28834635	...	65	206	280	2.254233e-06	7.144186e-06	9.710544e-06	-5.012756e+00	...	9	28778448	...	3.127340e-07
TCGA-CK-5915-01A-11D-1650-10	279	279	0	194	0	coding only	1	28834635	...	84	176	272	2.913163e-06	6.103771e-06	9.433100e-06	-5.025346e+00	...	12	28778448	...	4.169787e-07
TCGA-CK-5916-01A-11D-1650-10	945	945	0	770	0	coding only	1	28834635	...	164	420	917	5.687605e-06	1.456582e-05	3.180203e-05	-4.497545e+00	...	333	28778448	...	1.157116e-05
TCGA-CK-6746-01A-11D-1835-10	1444	1444	0	1122	0	coding only	1	28834635	...	315	802	1407	1.092436e-05	2.781377e-05	4.879549e-05	-4.311620e+00	...	290	28778448	...	1.007699e-05
TCGA-CK-6747-01A-11D-1835-10	269	269	0	206	0	coding only	1	28834635	...	61	134	261	2.115511e-06	4.647189e-06	9.051614e-06	-5.043274e+00	...	66	28778448	...	2.293383e-06
TCGA-CK-6748-01A-11D-1835-10	136	136	0	96	0	coding only	1	28834635	...	38	87	133	1.317860e-06	3.017205e-06	4.612509e-06	-5.336063e+00	...	8	28778448	...	2.779858e-07
TCGA-CK-6751-01A-11D-1835-10	289	289	0	210	0	coding only	1	28834635	...	78	199	284	2.705080e-06	6.901423e-06	9.849266e-06	-5.006596e+00	...	7	28778448	...	2.432376e-07
TCGA-CL-5917-01A-11D-1657-10	210	210	0	141	0	coding only	1	28834635	...	67	132	205	2.323595e-06	4.577828e-06	7.109506e-06	-5.148161e+00	...	6	28778448	...	2.084894e-07
TCGA-CL-5918-01A-11D-1657-10	238	238	0	159	0	coding only	1	28834635	...	78	152	233	2.705080e-06	5.271438e-06	8.080560e-06	-5.092559e+00	...	3	28778448	...	1.042447e-07
TCGA-CM-4743-01A-01D-1719-10	1531	1531	0	1147	0	coding only	1	28834635	...	379	859	1496	1.314392e-05	2.979056e-05	5.188205e-05	-4.284983e+00	...	258	28778448	...	8.965042e-06
TCGA-CM-4744-01A-01D-1408-10	202	202	0	151	0	coding only	1	28834635	...	51	136	198	1.768706e-06	4.716550e-06	6.866742e-06	-5.163249e+00	...	11	28778448	...	3.822305e-07
TCGA-CM-4746-01A-01D-1408-10	856	856	0	628	0	coding only	1	28834635	...	227	498	848	7.872477e-06	1.727090e-05	2.940908e-05	-4.531519e+00	...	123	28778448	...	4.274032e-06
TCGA-CM-4747-01A-01D-1408-10	122	122	0	84	0	coding only	1	28834635	...	37	76	120	1.283179e-06	2.635719e-06	4.161662e-06	-5.380733e+00	...	7	28778448	...	2.432376e-07
TCGA-CM-4752-01A-01D-1408-10	407	407	0	286	0	coding only	1	28834635	...	121	273	403	4.196342e-06	9.467781e-06	1.397625e-05	-4.854609e+00	...	9	28778448	...	3.127340e-07
TCGA-CM-5341-01A-01D-1408-10	176	176	0	127	0	coding only	1	28834635	...	49	118	170	1.699345e-06	4.092301e-06	5.895688e-06	-5.229466e+00	...	3	28778448	...	1.042447e-07
TCGA-CM-5344-01A-21D-1719-10	331	331	0	238	0	coding only	1	28834635	...	92	224	325	3.190607e-06	7.768435e-06	1.127117e-05	-4.948031e+00	...	9	28778448	...	3.127340e-07
TCGA-CM-5348-01A-21D-1719-10	498	498	0	349	0	coding only	1	28834635	...	147	333	487	5.098036e-06	1.154861e-05	1.688941e-05	-4.772385e+00	...	7	28778448	...	2.432376e-07
TCGA-CM-5349-01A-21D-1719-10	455	455	0	316	0	coding only	1	28834635	...	136	301	449	4.716550e-06	1.043884e-05	1.557155e-05	-4.807668e+00	...	12	28778448	...	4.169787e-07
TCGA-CM-5860-01A-01D-1650-10	392	392	0	284	0	coding only	1	28834635	...	108	280	388	3.745496e-06	9.710544e-06	1.345604e-05	-4.871083e+00	...	0	28778448	...	0
TCGA-CM-5861-01A-01D-1650-10	1713	1713	0	1272	0	coding only	1	28834635	...	428	988	1667	1.484326e-05	3.426435e-05	5.781242e-05	-4.237979e+00	...	251	28778448	...	8.721805e-06
TCGA-CM-5862-01A-01D-1650-10	279	279	0	193	0	coding only	1	28834635	...	85	180	276	2.947844e-06	6.242493e-06	9.571822e-06	-5.019005e+00	...	11	28778448	...	3.822305e-07
TCGA-CM-5863-01A-21D-1835-10	107	107	0	72	0	coding only	1	28834635	...	34	69	106	1.179138e-06	2.392956e-06	3.676135e-06	-5.434609e+00	...	3	28778448	...	1.042447e-07
TCGA-CM-5864-01A-01D-1650-10	386	386	0	277	0	coding only	1	28834635	...	107	264	374	3.710815e-06	9.155656e-06	1.297051e-05	-4.887043e+00	...	3	28778448	...	1.042447e-07
TCGA-CM-5868-01A-01D-1650-10	343	343	0	232	0	coding only	1	28834635	...	110	221	338	3.814857e-06	7.664394e-06	1.172201e-05	-4.930998e+00	...	7	28778448	...	2.432376e-07
TCGA-CM-6161-01A-11D-1650-10	323	323	0	231	0	coding only	1	28834635	...	91	222	320	3.155927e-06	7.699074e-06	1.109776e-05	-4.954764e+00	...	7	28778448	...	2.432376e-07
TCGA-CM-6162-01A-11D-1650-10	1297	1297	0	938	0	coding only	1	28834635	...	352	778	1261	1.220754e-05	2.698144e-05	4.373213e-05	-4.359199e+00	...	131	28778448	...	4.552018e-06
TCGA-CM-6163-01A-11D-1650-10	232	232	0	171	0	coding only	1	28834635	...	60	164	229	2.080831e-06	5.687605e-06	7.941838e-06	-5.100079e+00	...	5	28778448	...	1.737411e-07
TCGA-CM-6164-01A-11D-1650-10	247	247	0	176	0	coding only	1	28834635	...	70	175	246	2.427636e-06	6.069090e-06	8.531407e-06	-5.068979e+00	...	1	28778448	...	3.474823e-08
TCGA-CM-6165-01A-11D-1650-10	183	183	0	131	0	coding only	1	28834635	...	51	121	180	1.768706e-06	4.196342e-06	6.242493e-06	-5.204642e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6166-01A-11D-1650-10	195	195	0	148	0	coding only	1	28834635	...	47	138	193	1.629984e-06	4.785911e-06	6.693339e-06	-5.174357e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6167-01A-11D-1650-10	190	190	0	132	0	coding only	1	28834635	...	57	122	187	1.976789e-06	4.231023e-06	6.485256e-06	-5.188073e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6168-01A-11D-1650-10	372	372	0	273	0	coding only	1	28834635	...	97	262	365	3.364010e-06	9.086295e-06	1.265839e-05	-4.897622e+00	...	6	28778448	...	2.084894e-07
TCGA-CM-6169-01A-11D-1650-10	239	239	0	182	0	coding only	1	28834635	...	57	171	236	1.976789e-06	5.930368e-06	8.184602e-06	-5.087002e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6170-01A-11D-1650-10	216	216	0	149	0	coding only	1	28834635	...	66	140	212	2.288914e-06	4.855272e-06	7.352269e-06	-5.133579e+00	...	6	28778448	...	2.084894e-07
TCGA-CM-6171-01A-11D-1650-10	1534	1534	0	1147	0	coding only	1	28834635	...	378	865	1498	1.310923e-05	2.999865e-05	5.195141e-05	-4.284403e+00	...	255	28778448	...	8.860797e-06
TCGA-CM-6172-01A-11D-1650-10	260	260	0	170	0	coding only	1	28834635	...	88	162	258	3.051885e-06	5.618243e-06	8.947573e-06	-5.048295e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6674-01A-11D-1835-10	1029	1029	0	773	0	coding only	1	28834635	...	254	606	1004	8.808851e-06	2.101639e-05	3.481924e-05	-4.458181e+00	...	144	28778448	...	5.003744e-06
TCGA-CM-6675-01A-11D-1835-10	162	162	0	122	0	coding only	1	28834635	...	39	112	158	1.352540e-06	3.884218e-06	5.479521e-06	-5.261257e+00	...	7	28778448	...	2.432376e-07
TCGA-CM-6676-01A-11D-1835-10	234	234	0	167	0	coding only	1	28834635	...	66	163	232	2.288914e-06	5.652924e-06	8.045880e-06	-5.094426e+00	...	3	28778448	...	1.042447e-07
TCGA-CM-6677-01A-11D-1835-10	215	215	0	159	0	coding only	1	28834635	...	56	150	214	1.942109e-06	5.202077e-06	7.421630e-06	-5.129501e+00	...	8	28778448	...	2.779858e-07
TCGA-CM-6678-01A-11D-1835-10	253	253	0	174	0	coding only	1	28834635	...	78	163	246	2.705080e-06	5.652924e-06	8.531407e-06	-5.068979e+00	...	5	28778448	...	1.737411e-07
TCGA-CM-6679-01A-11D-1835-10	113	113	0	77	0	coding only	1	28834635	...	35	72	112	1.213818e-06	2.496997e-06	3.884218e-06	-5.410696e+00	...	5	28778448	...	1.737411e-07
TCGA-CM-6680-01A-11D-1835-10	207	207	0	138	0	coding only	1	28834635	...	68	127	204	2.358275e-06	4.404425e-06	7.074825e-06	-5.150284e+00	...	9	28778448	...	3.127340e-07
TCGA-D5-5537-01A-21D-1924-10	179	179	0	123	0	coding only	1	28834635	...	54	108	170	1.872748e-06	3.745496e-06	5.895688e-06	-5.229466e+00	...	8	28778448	...	2.779858e-07
TCGA-D5-5538-01A-01D-1650-10	301	301	0	218	0	coding only	1	28834635	...	82	210	297	2.843802e-06	7.282908e-06	1.030011e-05	-4.987158e+00	...	5	28778448	...	1.737411e-07
TCGA-D5-5539-01A-01D-1650-10	330	330	0	229	0	coding only	1	28834635	...	100	218	322	3.468052e-06	7.560352e-06	1.116713e-05	-4.952059e+00	...	4	28778448	...	1.389929e-07
TCGA-D5-5540-01A-01D-1650-10	285	285	0	194	0	coding only	1	28834635	...	89	185	281	3.086566e-06	6.415895e-06	9.745225e-06	-5.011208e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-5541-01A-01D-1650-10	221	221	0	146	0	coding only	1	28834635	...	74	140	219	2.566358e-06	4.855272e-06	7.595033e-06	-5.119470e+00	...	5	28778448	...	1.737411e-07
TCGA-D5-6529-01A-11D-1771-10	245	245	0	161	0	coding only	1	28834635	...	83	155	243	2.878483e-06	5.375480e-06	8.427365e-06	-5.074308e+00	...	5	28778448	...	1.737411e-07
TCGA-D5-6532-01A-11D-1719-10	382	382	0	259	0	coding only	1	28834635	...	122	250	379	4.231023e-06	8.670129e-06	1.314392e-05	-4.881275e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6533-01A-11D-1719-10	476	476	0	345	0	coding only	1	28834635	...	129	329	467	4.473786e-06	1.140989e-05	1.619580e-05	-4.790598e+00	...	9	28778448	...	3.127340e-07
TCGA-D5-6534-01A-21D-1924-10	204	204	0	152	0	coding only	1	28834635	...	52	141	200	1.803387e-06	4.889953e-06	6.936103e-06	-5.158884e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6535-01A-11D-1719-10	451	451	0	331	0	coding only	1	28834635	...	120	319	446	4.161662e-06	1.106308e-05	1.546751e-05	-4.810580e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6536-01A-11D-1719-10	440	440	0	325	0	coding only	1	28834635	...	114	314	437	3.953579e-06	1.088968e-05	1.515539e-05	-4.819433e+00	...	9	28778448	...	3.127340e-07
TCGA-D5-6537-01A-11D-1719-10	338	338	0	259	0	coding only	1	28834635	...	79	243	329	2.739761e-06	8.427365e-06	1.140989e-05	-4.942719e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6538-01A-11D-1719-10	309	309	0	219	0	coding only	1	28834635	...	89	207	306	3.086566e-06	7.178867e-06	1.061224e-05	-4.974193e+00	...	10	28778448	...	3.474823e-07
TCGA-D5-6539-01A-11D-1719-10	335	335	0	237	0	coding only	1	28834635	...	98	235	333	3.398690e-06	8.149921e-06	1.154861e-05	-4.937470e+00	...	0	28778448	...	0
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TCGA-D5-6541-01A-11D-1719-10	310	310	0	235	0	coding only	1	28834635	...	75	219	304	2.601039e-06	7.595033e-06	1.054288e-05	-4.977041e+00	...	10	28778448	...	3.474823e-07
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TCGA-D5-6920-01A-11D-1924-10	161	161	0	112	0	coding only	1	28834635	...	48	103	158	1.664665e-06	3.572093e-06	5.479521e-06	-5.261257e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6922-01A-11D-1924-10	211	211	0	145	0	coding only	1	28834635	...	64	135	206	2.219553e-06	4.681870e-06	7.144186e-06	-5.146047e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-6923-01A-11D-1924-10	337	337	0	217	0	coding only	1	28834635	...	116	210	331	4.022940e-06	7.282908e-06	1.147925e-05	-4.940086e+00	...	5	28778448	...	1.737411e-07
TCGA-D5-6924-01A-11D-1924-10	228	228	0	164	0	coding only	1	28834635	...	64	152	221	2.219553e-06	5.271438e-06	7.664394e-06	-5.115522e+00	...	5	28778448	...	1.737411e-07
TCGA-D5-6926-01A-11D-1924-10	146	146	0	105	0	coding only	1	28834635	...	41	98	142	1.421901e-06	3.398690e-06	4.924633e-06	-5.307626e+00	...	3	28778448	...	1.042447e-07
TCGA-D5-6927-01A-21D-1924-10	800	800	0	612	0	coding only	1	28834635	...	183	464	779	6.346534e-06	1.609176e-05	2.701612e-05	-4.568377e+00	...	132	28778448	...	4.586766e-06
TCGA-D5-6928-01A-11D-1924-10	1561	1561	0	1181	0	coding only	1	28834635	...	375	1014	1530	1.300519e-05	3.516604e-05	5.306119e-05	-4.275223e+00	...	141	28778448	...	4.899500e-06
TCGA-D5-6929-01A-31D-1924-10	255	255	0	191	0	coding only	1	28834635	...	63	181	253	2.184872e-06	6.277173e-06	8.774170e-06	-5.056794e+00	...	9	28778448	...	3.127340e-07
TCGA-D5-6930-01A-11D-1924-10	1385	1385	0	1019	0	coding only	1	28834635	...	357	808	1346	1.238094e-05	2.802186e-05	4.667997e-05	-4.330869e+00	...	181	28778448	...	6.289429e-06
TCGA-D5-6931-01A-11D-1924-10	402	402	0	293	0	coding only	1	28834635	...	108	278	396	3.745496e-06	9.641183e-06	1.373348e-05	-4.862219e+00	...	10	28778448	...	3.474823e-07
TCGA-D5-6932-01A-11D-1924-10	194	194	0	145	0	coding only	1	28834635	...	49	133	189	1.699345e-06	4.612509e-06	6.554617e-06	-5.183453e+00	...	7	28778448	...	2.432376e-07
TCGA-D5-7000-01A-11D-1924-10	183	183	0	123	0	coding only	1	28834635	...	60	114	181	2.080831e-06	3.953579e-06	6.277173e-06	-5.202236e+00	...	7	28778448	...	2.432376e-07
TCGA-DC-5337-01A-01D-1657-10	294	294	0	213	0	coding only	1	28834635	...	79	197	286	2.739761e-06	6.832062e-06	9.918627e-06	-5.003548e+00	...	10	28778448	...	3.474823e-07
TCGA-DC-5869-01A-01D-1657-10	197	197	0	132	0	coding only	1	28834635	...	64	113	192	2.219553e-06	3.918898e-06	6.658659e-06	-5.176613e+00	...	15	28778448	...	5.212234e-07
TCGA-DC-6155-01A-11D-1657-10	147	147	0	100	0	coding only	1	28834635	...	45	95	144	1.560623e-06	3.294649e-06	4.993994e-06	-5.301552e+00	...	4	28778448	...	1.389929e-07
TCGA-DC-6157-01A-11D-1657-10	189	189	0	147	0	coding only	1	28834635	...	41	140	186	1.421901e-06	4.855272e-06	6.450576e-06	-5.190402e+00	...	5	28778448	...	1.737411e-07
TCGA-DC-6158-01A-11D-1657-10	158	158	0	116	0	coding only	1	28834635	...	42	109	156	1.456582e-06	3.780176e-06	5.410160e-06	-5.266790e+00	...	5	28778448	...	1.737411e-07
TCGA-DC-6160-01A-11D-1657-10	200	200	0	143	0	coding only	1	28834635	...	55	129	193	1.907428e-06	4.473786e-06	6.693339e-06	-5.174357e+00	...	9	28778448	...	3.127340e-07
TCGA-DC-6681-01A-11D-1826-10	183	183	0	118	0	coding only	1	28834635	...	65	110	179	2.254233e-06	3.814857e-06	6.207812e-06	-5.207061e+00	...	4	28778448	...	1.389929e-07
TCGA-DC-6682-01A-11D-1826-10	207	207	0	150	0	coding only	1	28834635	...	57	139	205	1.976789e-06	4.820592e-06	7.109506e-06	-5.148161e+00	...	9	28778448	...	3.127340e-07
TCGA-DC-6683-01A-11D-1826-10	126	126	0	87	0	coding only	1	28834635	...	39	80	122	1.352540e-06	2.774441e-06	4.231023e-06	-5.373555e+00	...	3	28778448	...	1.042447e-07
TCGA-DM-A0X9-01A-11D-A152-10	250	250	0	184	0	coding only	1	28834635	...	65	174	246	2.254233e-06	6.034410e-06	8.531407e-06	-5.068979e+00	...	7	28778448	...	2.432376e-07
TCGA-DM-A0XD-01A-12D-A152-10	278	278	0	200	0	coding only	1	28834635	...	77	185	274	2.670400e-06	6.415895e-06	9.502461e-06	-5.022164e+00	...	12	28778448	...	4.169787e-07
TCGA-DM-A0XF-01A-11D-A152-10	218	218	0	161	0	coding only	1	28834635	...	56	152	214	1.942109e-06	5.271438e-06	7.421630e-06	-5.129501e+00	...	6	28778448	...	2.084894e-07
TCGA-DM-A1D0-01A-11D-A152-10	173	173	0	123	0	coding only	1	28834635	...	50	114	171	1.734026e-06	3.953579e-06	5.930368e-06	-5.226918e+00	...	7	28778448	...	2.432376e-07
TCGA-DM-A1D4-01A-21D-A152-10	340	340	0	253	0	coding only	1	28834635	...	87	241	338	3.017205e-06	8.358004e-06	1.172201e-05	-4.930998e+00	...	10	28778448	...	3.474823e-07
TCGA-DM-A1D6-01A-21D-A152-10	285	285	0	196	0	coding only	1	28834635	...	88	189	282	3.051885e-06	6.554617e-06	9.779905e-06	-5.009665e+00	...	5	28778448	...	1.737411e-07
TCGA-DM-A1D7-01A-11D-A152-10	216	216	0	146	0	coding only	1	28834635	...	70	142	216	2.427636e-06	4.924633e-06	7.490991e-06	-5.125461e+00	...	4	28778448	...	1.389929e-07
TCGA-DM-A1D8-01A-11D-A152-10	217	217	0	162	0	coding only	1	28834635	...	53	155	214	1.838067e-06	5.375480e-06	7.421630e-06	-5.129501e+00	...	6	28778448	...	2.084894e-07
TCGA-DM-A1D9-01A-11D-A152-10	224	224	0	163	0	coding only	1	28834635	...	61	147	223	2.115511e-06	5.098036e-06	7.733755e-06	-5.111610e+00	...	15	28778448	...	5.212234e-07
TCGA-DM-A1DA-01A-11D-A152-10	408	408	0	315	0	coding only	1	28834635	...	92	300	401	3.190607e-06	1.040415e-05	1.390689e-05	-4.856770e+00	...	9	28778448	...	3.127340e-07
TCGA-DM-A1DB-01A-11D-A152-10	316	316	0	213	0	coding only	1	28834635	...	102	208	313	3.537413e-06	7.213547e-06	1.085500e-05	-4.964370e+00	...	3	28778448	...	1.042447e-07
TCGA-DM-A1HA-01A-11D-A152-10	258	258	0	193	0	coding only	1	28834635	...	63	181	253	2.184872e-06	6.277173e-06	8.774170e-06	-5.056794e+00	...	9	28778448	...	3.127340e-07
TCGA-DM-A1HB-01A-21D-A183-10	1483	1483	0	1109	0	coding only	1	28834635	...	370	855	1462	1.283179e-05	2.965184e-05	5.070291e-05	-4.294967e+00	...	237	28778448	...	8.235329e-06
TCGA-DM-A282-01A-12D-A16V-10	175	175	0	121	0	coding only	1	28834635	...	52	112	172	1.803387e-06	3.884218e-06	5.965049e-06	-5.224386e+00	...	8	28778448	...	2.779858e-07
TCGA-DM-A285-01A-11D-A16V-10	223	223	0	168	0	coding only	1	28834635	...	53	161	219	1.838067e-06	5.583563e-06	7.595033e-06	-5.119470e+00	...	5	28778448	...	1.737411e-07
TCGA-DM-A28C-01A-11D-A16V-10	186	186	0	133	0	coding only	1	28834635	...	53	121	184	1.838067e-06	4.196342e-06	6.381215e-06	-5.195097e+00	...	10	28778448	...	3.474823e-07
TCGA-DM-A28E-01A-11D-A16V-10	171	171	0	122	0	coding only	1	28834635	...	47	113	168	1.629984e-06	3.918898e-06	5.826327e-06	-5.234605e+00	...	8	28778448	...	2.779858e-07
TCGA-DM-A28F-01A-11D-A16V-10	423	423	0	305	0	coding only	1	28834635	...	118	286	421	4.092301e-06	9.918627e-06	1.460050e-05	-4.835632e+00	...	17	28778448	...	5.907198e-07
TCGA-DM-A28G-01A-11D-A16V-10	258	258	0	177	0	coding only	1	28834635	...	81	169	256	2.809122e-06	5.861007e-06	8.878212e-06	-5.051674e+00	...	6	28778448	...	2.084894e-07
TCGA-DM-A28H-01A-11D-A16V-10	320	320	0	236	0	coding only	1	28834635	...	84	217	315	2.913163e-06	7.525672e-06	1.092436e-05	-4.961604e+00	...	14	28778448	...	4.864752e-07
TCGA-DM-A28K-01A-21D-A16V-10	254	254	0	185	0	coding only	1	28834635	...	69	175	252	2.392956e-06	6.069090e-06	8.739490e-06	-5.058514e+00	...	8	28778448	...	2.779858e-07
TCGA-DT-5265-01A-21D-1826-10	121	121	0	91	0	coding only	1	28834635	...	30	84	118	1.040415e-06	2.913163e-06	4.092301e-06	-5.388032e+00	...	4	28778448	...	1.389929e-07
TCGA-DY-A0XA-01A-11D-A152-10	337	337	0	241	0	coding only	1	28834635	...	93	233	331	3.225288e-06	8.080560e-06	1.147925e-05	-4.940086e+00	...	5	28778448	...	1.737411e-07
TCGA-DY-A1DC-01A-31D-A152-10	214	214	0	170	0	coding only	1	28834635	...	44	164	211	1.525943e-06	5.687605e-06	7.317589e-06	-5.135632e+00	...	3	28778448	...	1.042447e-07
TCGA-DY-A1DD-01A-21D-A152-10	237	237	0	169	0	coding only	1	28834635	...	67	156	234	2.323595e-06	5.410160e-06	8.115241e-06	-5.090699e+00	...	11	28778448	...	3.822305e-07
TCGA-DY-A1DF-01A-11D-A152-10	194	194	0	154	0	coding only	1	28834635	...	40	141	190	1.387221e-06	4.889953e-06	6.589298e-06	-5.181161e+00	...	9	28778448	...	3.127340e-07
TCGA-DY-A1DG-01A-11D-A152-10	340	340	0	247	0	coding only	1	28834635	...	93	234	335	3.225288e-06	8.115241e-06	1.161797e-05	-4.934870e+00	...	8	28778448	...	2.779858e-07
TCGA-DY-A1H8-01A-21D-A152-10	177	177	0	123	0	coding only	1	28834635	...	54	117	174	1.872748e-06	4.057620e-06	6.034410e-06	-5.219365e+00	...	3	28778448	...	1.042447e-07
TCGA-EF-5830-01A-01D-1657-10	314	314	0	227	0	coding only	1	28834635	...	85	220	306	2.947844e-06	7.629713e-06	1.061224e-05	-4.974193e+00	...	1	28778448	...	3.474823e-08
TCGA-EI-6506-01A-11D-1733-10	266	266	0	194	0	coding only	1	28834635	...	72	184	264	2.496997e-06	6.381215e-06	9.155656e-06	-5.038311e+00	...	8	28778448	...	2.779858e-07
TCGA-EI-6507-01A-11D-1733-10	1116	1116	0	847	0	coding only	1	28834635	...	264	634	1088	9.155656e-06	2.198745e-05	3.773240e-05	-4.423286e+00	...	190	28778448	...	6.602163e-06
TCGA-EI-6508-01A-11D-1733-10	188	188	0	142	0	coding only	1	28834635	...	46	135	184	1.595304e-06	4.681870e-06	6.381215e-06	-5.195097e+00	...	3	28778448	...	1.042447e-07
TCGA-EI-6510-01A-11D-1733-10	267	267	0	178	0	coding only	1	28834635	...	86	167	262	2.982524e-06	5.791646e-06	9.086295e-06	-5.041613e+00	...	9	28778448	...	3.127340e-07
TCGA-F4-6459-01A-11D-1771-10	199	199	0	154	0	coding only	1	28834635	...	44	143	195	1.525943e-06	4.959314e-06	6.762700e-06	-5.169880e+00	...	8	28778448	...	2.779858e-07
TCGA-F4-6460-01A-11D-1771-10	309	309	0	234	0	coding only	1	28834635	...	73	227	304	2.531678e-06	7.872477e-06	1.054288e-05	-4.977041e+00	...	4	28778448	...	1.389929e-07
TCGA-F4-6569-01A-11D-1771-10	197	197	0	149	0	coding only	1	28834635	...	48	142	195	1.664665e-06	4.924633e-06	6.762700e-06	-5.169880e+00	...	5	28778448	...	1.737411e-07
TCGA-F4-6570-01A-11D-1771-10	1781	1781	0	1374	0	coding only	1	28834635	...	400	1075	1749	1.387221e-05	3.728155e-05	6.065622e-05	-4.217125e+00	...	274	28778448	...	9.521014e-06
TCGA-F4-6703-01A-11D-1835-10	500	500	0	354	0	coding only	1	28834635	...	143	331	491	4.959314e-06	1.147925e-05	1.702813e-05	-4.768833e+00	...	17	28778448	...	5.907198e-07
TCGA-F4-6704-01A-11D-1835-10	75	75	0	55	0	coding only	1	28834635	...	20	52	74	6.936103e-07	1.803387e-06	2.566358e-06	-5.590683e+00	...	2	28778448	...	6.949645e-08
TCGA-F4-6805-01A-11D-1835-10	83	83	0	59	0	coding only	1	28834635	...	23	56	81	7.976519e-07	1.942109e-06	2.809122e-06	-5.551429e+00	...	2	28778448	...	6.949645e-08
TCGA-F4-6806-01A-11D-1835-10	139	139	0	99	0	coding only	1	28834635	...	40	93	138	1.387221e-06	3.225288e-06	4.785911e-06	-5.320035e+00	...	5	28778448	...	1.737411e-07
TCGA-F4-6807-01A-11D-1835-10	205	205	0	155	0	coding only	1	28834635	...	48	145	197	1.664665e-06	5.028675e-06	6.832062e-06	-5.165448e+00	...	4	28778448	...	1.389929e-07
TCGA-F4-6808-01A-11D-1835-10	200	200	0	143	0	coding only	1	28834635	...	57	141	198	1.976789e-06	4.889953e-06	6.866742e-06	-5.163249e+00	...	0	28778448	...	0
TCGA-F4-6809-01A-11D-1835-10	193	193	0	146	0	coding only	1	28834635	...	47	138	190	1.629984e-06	4.785911e-06	6.589298e-06	-5.181161e+00	...	5	28778448	...	1.737411e-07
TCGA-F4-6854-01A-11D-1924-10	122	122	0	96	0	coding only	1	28834635	...	24	88	118	8.323324e-07	3.051885e-06	4.092301e-06	-5.388032e+00	...	6	28778448	...	2.084894e-07
TCGA-F4-6855-01A-11D-1924-10	139	139	0	98	0	coding only	1	28834635	...	41	91	137	1.421901e-06	3.155927e-06	4.751231e-06	-5.323194e+00	...	5	28778448	...	1.737411e-07
TCGA-F4-6856-01A-11D-1924-10	1175	1175	0	877	0	coding only	1	28834635	...	289	660	1150	1.002267e-05	2.288914e-05	3.988259e-05	-4.399217e+00	...	201	28778448	...	6.984393e-06
TCGA-F5-6464-01A-11D-1733-10	145	145	0	116	0	coding only	1	28834635	...	29	110	144	1.005735e-06	3.814857e-06	4.993994e-06	-5.301552e+00	...	5	28778448	...	1.737411e-07
TCGA-F5-6465-01A-11D-1733-10	222	222	0	162	0	coding only	1	28834635	...	58	154	217	2.011470e-06	5.340799e-06	7.525672e-06	-5.123455e+00	...	5	28778448	...	1.737411e-07
TCGA-F5-6571-01A-12D-1826-10	152	152	0	110	0	coding only	1	28834635	...	42	101	151	1.456582e-06	3.502732e-06	5.236758e-06	-5.280938e+00	...	8	28778448	...	2.779858e-07
TCGA-F5-6702-01A-11D-1826-10	95	95	0	63	0	coding only	1	28834635	...	31	59	93	1.075096e-06	2.046150e-06	3.225288e-06	-5.491432e+00	...	3	28778448	...	1.042447e-07
TCGA-F5-6811-01A-11D-1826-10	184	184	0	130	0	coding only	1	28834635	...	53	122	182	1.838067e-06	4.231023e-06	6.311854e-06	-5.199843e+00	...	7	28778448	...	2.432376e-07
TCGA-F5-6812-01A-11D-1826-10	138	138	0	108	0	coding only	1	28834635	...	30	103	137	1.040415e-06	3.572093e-06	4.751231e-06	-5.323194e+00	...	4	28778448	...	1.389929e-07
TCGA-F5-6813-01A-11D-1826-10	193	193	0	134	0	coding only	1	28834635	...	59	126	192	2.046150e-06	4.369745e-06	6.658659e-06	-5.176613e+00	...	7	28778448	...	2.432376e-07
TCGA-G4-6293-01A-11D-1719-10	499	499	0	334	0	coding only	1	28834635	...	165	318	493	5.722285e-06	1.102840e-05	1.709749e-05	-4.767068e+00	...	10	28778448	...	3.474823e-07
TCGA-G4-6299-01A-11D-1771-10	302	302	0	211	0	coding only	1	28834635	...	91	198	300	3.155927e-06	6.866742e-06	1.040415e-05	-4.982793e+00	...	11	28778448	...	3.822305e-07
TCGA-G4-6303-01A-11D-1771-10	415	415	0	280	0	coding only	1	28834635	...	134	270	407	4.647189e-06	9.363739e-06	1.411497e-05	-4.850320e+00	...	3	28778448	...	1.042447e-07
TCGA-G4-6304-01A-11D-1924-10	924	924	0	669	0	coding only	1	28834635	...	249	627	909	8.635448e-06	2.174468e-05	3.152459e-05	-4.501351e+00	...	33	28778448	...	1.146691e-06
TCGA-G4-6306-01A-11D-1771-10	322	322	0	239	0	coding only	1	28834635	...	83	225	317	2.878483e-06	7.803116e-06	1.099372e-05	-4.958855e+00	...	9	28778448	...	3.127340e-07
TCGA-G4-6307-01A-11D-1719-10	366	366	0	268	0	coding only	1	28834635	...	97	260	362	3.364010e-06	9.016934e-06	1.255435e-05	-4.901206e+00	...	5	28778448	...	1.737411e-07
TCGA-G4-6309-01A-21D-1835-10	1020	1020	0	766	0	coding only	1	28834635	...	248	589	1000	8.600768e-06	2.042682e-05	3.468052e-05	-4.459914e+00	...	163	28778448	...	5.663961e-06
TCGA-G4-6310-01A-11D-1719-10	320	320	0	209	0	coding only	1	28834635	...	109	200	314	3.780176e-06	6.936103e-06	1.088968e-05	-4.962985e+00	...	5	28778448	...	1.737411e-07
TCGA-G4-6315-01A-11D-1719-10	390	390	0	280	0	coding only	1	28834635	...	110	266	386	3.814857e-06	9.225017e-06	1.338668e-05	-4.873327e+00	...	10	28778448	...	3.474823e-07
TCGA-G4-6317-01A-11D-1719-10	294	294	0	216	0	coding only	1	28834635	...	78	203	289	2.705080e-06	7.040145e-06	1.002267e-05	-4.999017e+00	...	8	28778448	...	2.779858e-07
TCGA-G4-6321-01A-11D-1719-10	321	321	0	226	0	coding only	1	28834635	...	92	216	314	3.190607e-06	7.490991e-06	1.088968e-05	-4.962985e+00	...	6	28778448	...	2.084894e-07
TCGA-G4-6323-01A-11D-1719-10	276	276	0	190	0	coding only	1	28834635	...	83	186	272	2.878483e-06	6.450576e-06	9.433100e-06	-5.025346e+00	...	3	28778448	...	1.042447e-07
TCGA-G4-6586-01A-11D-1771-10	1522	1522	0	1149	0	coding only	1	28834635	...	365	858	1492	1.265839e-05	2.975588e-05	5.174333e-05	-4.286146e+00	...	269	28778448	...	9.347273e-06
TCGA-G4-6588-01A-11D-1771-10	2603	2603	0	1944	0	coding only	1	28834635	...	642	1477	2543	2.226489e-05	5.122312e-05	8.819255e-05	-4.054568e+00	...	424	28778448	...	1.473325e-05
TCGA-G4-6625-01A-21D-1771-10	237	237	0	168	0	coding only	1	28834635	...	69	160	234	2.392956e-06	5.548882e-06	8.115241e-06	-5.090699e+00	...	5	28778448	...	1.737411e-07
TCGA-G4-6626-01A-11D-1771-10	453	453	0	309	0	coding only	1	28834635	...	141	299	445	4.889953e-06	1.036947e-05	1.543283e-05	-4.811554e+00	...	5	28778448	...	1.737411e-07
TCGA-G4-6628-01A-11D-1835-10	2123	2123	0	1574	0	coding only	1	28834635	...	535	1210	2067	1.855408e-05	4.196342e-05	7.168463e-05	-4.144574e+00	...	322	28778448	...	1.118893e-05
TCGA-G5-6235-01A-11D-1733-10	274	274	0	203	0	coding only	1	28834635	...	70	198	270	2.427636e-06	6.866742e-06	9.363739e-06	-5.028551e+00	...	2	28778448	...	6.949645e-08
TCGA-G5-6641-01A-11D-1826-10	127	127	0	94	0	coding only	1	28834635	...	33	86	125	1.144457e-06	2.982524e-06	4.335064e-06	-5.363004e+00	...	6	28778448	...	2.084894e-07
