[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  RPPA_EXPR"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
                                       Clinical feature                        
DAYS_TO_DEATH_OR_LAST_FUP              "DAYS_TO_DEATH_OR_LAST_FUP"             
YEARS_TO_BIRTH                         "YEARS_TO_BIRTH"                        
GENDER                                 "GENDER"                                
KARNOFSKY_PERFORMANCE_SCORE            "KARNOFSKY_PERFORMANCE_SCORE"           
HISTOLOGICAL_TYPE                      "HISTOLOGICAL_TYPE"                     
RADIATIONS_RADIATION_REGIMENINDICATION "RADIATIONS_RADIATION_REGIMENINDICATION"
RACE                                   "RACE"                                  
                                       Statistical test           
DAYS_TO_DEATH_OR_LAST_FUP              "Cox regression test"      
YEARS_TO_BIRTH                         "Spearman correlation test"
GENDER                                 "Wilcoxon test"            
KARNOFSKY_PERFORMANCE_SCORE            "Spearman correlation test"
HISTOLOGICAL_TYPE                      "Kruskal-Wallis test"      
RADIATIONS_RADIATION_REGIMENINDICATION "Wilcoxon test"            
RACE                                   "Kruskal-Wallis test"      
                                       Significant genes Associated with   
DAYS_TO_DEATH_OR_LAST_FUP              "N=11"            "shorter survival"
YEARS_TO_BIRTH                         "N=0"             " "               
GENDER                                 "N=30"            "male"            
KARNOFSKY_PERFORMANCE_SCORE            "N=0"             " "               
HISTOLOGICAL_TYPE                      "N=0"             " "               
RADIATIONS_RADIATION_REGIMENINDICATION "N=0"             " "               
RACE                                   "N=0"             " "               
                                       &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP              "N=7"                                                                                     
YEARS_TO_BIRTH                         " "                                                                                       
GENDER                                 "N=30"                                                                                    
KARNOFSKY_PERFORMANCE_SCORE            " "                                                                                       
HISTOLOGICAL_TYPE                      " "                                                                                       
RADIATIONS_RADIATION_REGIMENINDICATION " "                                                                                       
RACE                                   " "                                                                                       
                                       Associated with        
DAYS_TO_DEATH_OR_LAST_FUP              "longer survival" "N=4"
YEARS_TO_BIRTH                         " "               " "  
GENDER                                 "female"          "N=0"
KARNOFSKY_PERFORMANCE_SCORE            " "               " "  
HISTOLOGICAL_TYPE                      " "               " "  
RADIATIONS_RADIATION_REGIMENINDICATION " "               " "  
RACE                                   " "               " "  
[1] "vtyp==survival in basici table generation"
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "check. how many intervals of data quantile for survival curve?"
[1] 4
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
