[1] "ofn"          "-oTGBMLGG-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/GBMLGG-TP/15249296/GBMLGG-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/GBMLGG-TP/15101907/transformed.cor.cli.txt"

nPatients in clinical file=1114, in cluster file=1090, common to both=1090
[1]   79 1090
[1] "AMP PEAK  1(1P36.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE 
                           104                            986 
  AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE 
                           104                            986 
[1] "AMP PEAK  2(1Q22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE 
                        144                         946 
  AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE 
                        144                         946 
[1] "AMP PEAK  3(1Q32.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE 
                          205                           885 
  AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE 
                          205                           885 
[1] "AMP PEAK  4(1Q44) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE 
                        129                         961 
  AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE 
                        129                         961 
[1] "AMP PEAK  5(2P24.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE 
                           72                          1018 
  AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE 
                           72                          1018 
[1] "AMP PEAK  6(3P25.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE 
                           85                          1005 
  AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE 
                           85                          1005 
[1] "AMP PEAK  7(3Q26.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE 
                           132                            958 
  AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE 
                           132                            958 
[1] "AMP PEAK  8(4P16.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE 
                           70                          1020 
  AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE 
                           70                          1020 
[1] "AMP PEAK  9(4Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE 
                        138                         952 
  AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE 
                        138                         952 
[1] "AMP PEAK 10(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE 
                            76                           1014 
  AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE 
                            76                           1014 
[1] "AMP PEAK 11(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          635                           455 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          635                           455 
[1] "AMP PEAK 12(7Q11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE 
                           581                            509 
  AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE 
                           581                            509 
[1] "AMP PEAK 13(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE 
                          636                           454 
  AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE 
                          636                           454 
[1] "AMP PEAK 14(7Q31.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE 
                          646                           444 
  AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE 
                          646                           444 
[1] "AMP PEAK 15(7Q32.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE 
                          659                           431 
  AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE 
                          659                           431 
[1] "AMP PEAK 16(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           169                            921 
  AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE 
                           169                            921 
[1] "AMP PEAK 17(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                          140                           950 
  AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE 
                          140                           950 
[1] "AMP PEAK 18(10P15.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE 
                            88                           1002 
  AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE 
                            88                           1002 
[1] "AMP PEAK 19(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          60                         1030 
  AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE 
                          60                         1030 
[1] "AMP PEAK 20(11Q24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE 
                           112                            978 
  AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE 
                           112                            978 
[1] "AMP PEAK 21(12P13.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE 
                            152                             938 
  AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE 
                            152                             938 
[1] "AMP PEAK 22(12Q14.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE 
                           171                            919 
  AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE 
                           171                            919 
[1] "AMP PEAK 23(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE 
                         111                          979 
  AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE 
                         111                          979 
[1] "AMP PEAK 24(13Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE 
                          54                         1036 
  AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE 
                          54                         1036 
[1] "AMP PEAK 25(14Q32.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE 
                             44                            1046 
  AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE 
                             44                            1046 
[1] "AMP PEAK 26(17P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE 
                            74                           1016 
  AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE 
                            74                           1016 
[1] "AMP PEAK 27(17Q25.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE 
                           128                            962 
  AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE 
                           128                            962 
[1] "AMP PEAK 28(19P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE 
                           375                            715 
  AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE 
                           375                            715 
[1] "AMP PEAK 29(19P13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                           371                            719 
  AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE 
                           371                            719 
[1] "AMP PEAK 30(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                         247                          843 
  AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE 
                         247                          843 
[1] "AMP PEAK 31(19Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE 
                           231                            859 
  AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE 
                           231                            859 
[1] "AMP PEAK 32(XP11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE 
                           104                            986 
  AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE 
                           104                            986 
[1] "DEL PEAK  1(1P36.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           318                            772 
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           318                            772 
[1] "DEL PEAK  2(1P36.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE 
                           348                            742 
  DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE 
                           348                            742 
[1] "DEL PEAK  3(1P32.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE 
                          257                           833 
  DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE 
                          257                           833 
[1] "DEL PEAK  4(1P22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE 
                          234                           856 
  DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE 
                          234                           856 
[1] "DEL PEAK  5(1Q42.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE 
                            80                           1010 
  DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE 
                            80                           1010 
[1] "DEL PEAK  6(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE 
                         71                        1019 
  DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE 
                         71                        1019 
[1] "DEL PEAK  7(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE 
                           68                          1022 
  DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE 
                           68                          1022 
[1] "DEL PEAK  8(2Q37.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE 
                          121                           969 
  DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE 
                          121                           969 
[1] "DEL PEAK  9(3P21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE 
                           108                            982 
  DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE 
                           108                            982 
[1] "DEL PEAK 10(3Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE 
                            95                            995 
  DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE 
                            95                            995 
[1] "DEL PEAK 11(3Q29) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE 
                        107                         983 
  DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE 
                        107                         983 
[1] "DEL PEAK 12(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE 
                          231                           859 
  DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE 
                          231                           859 
[1] "DEL PEAK 13(5P15.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE 
                           107                            983 
  DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE 
                           107                            983 
[1] "DEL PEAK 14(5Q34) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE 
                        133                         957 
  DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE 
                        133                         957 
[1] "DEL PEAK 15(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          138                           952 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                          138                           952 
[1] "DEL PEAK 16(6Q22.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           236                            854 
  DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE 
                           236                            854 
[1] "DEL PEAK 17(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        261                         829 
  DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE 
                        261                         829 
[1] "DEL PEAK 18(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                           88                          1002 
  DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE 
                           88                          1002 
[1] "DEL PEAK 19(8Q24.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE 
                           78                          1012 
  DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE 
                           78                          1012 
[1] "DEL PEAK 20(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          593                           497 
  DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE 
                          593                           497 
[1] "DEL PEAK 21(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE 
                           553                            537 
  DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE 
                           553                            537 
[1] "DEL PEAK 22(10P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE 
                         553                          537 
  DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE 
                         553                          537 
[1] "DEL PEAK 23(10P11.23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE 
                            558                             532 
  DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE 
                            558                             532 
[1] "DEL PEAK 24(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE 
                            628                             462 
  DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE 
                            628                             462 
[1] "DEL PEAK 25(10Q26.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE 
                           665                            425 
  DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE 
                           665                            425 
[1] "DEL PEAK 26(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           234                            856 
  DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE 
                           234                            856 
[1] "DEL PEAK 27(11P15.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE 
                           176                            914 
  DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE 
                           176                            914 
[1] "DEL PEAK 28(11P11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE 
                           159                            931 
  DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE 
                           159                            931 
[1] "DEL PEAK 29(12P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE 
                           110                            980 
  DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE 
                           110                            980 
[1] "DEL PEAK 30(12Q12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE 
                         147                          943 
  DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE 
                         147                          943 
[1] "DEL PEAK 31(12Q15) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE 
                         142                          948 
  DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE 
                         142                          948 
[1] "DEL PEAK 32(13Q14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           383                            707 
  DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE 
                           383                            707 
[1] "DEL PEAK 33(13Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE 
                           367                            723 
  DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE 
                           367                            723 
[1] "DEL PEAK 34(14Q13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE 
                           246                            844 
  DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE 
                           246                            844 
[1] "DEL PEAK 35(14Q24.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE 
                           292                            798 
  DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE 
                           292                            798 
[1] "DEL PEAK 36(14Q31.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE 
                           275                            815 
  DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE 
                           275                            815 
[1] "DEL PEAK 37(15Q14) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE 
                         214                          876 
  DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE 
                         214                          876 
[1] "DEL PEAK 38(16P12.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE 
                           114                            976 
  DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE 
                           114                            976 
[1] "DEL PEAK 39(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE 
                           129                            961 
  DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE 
                           129                            961 
[1] "DEL PEAK 40(17P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE 
                           116                            974 
  DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE 
                           116                            974 
[1] "DEL PEAK 41(17Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE 
                            93                            997 
  DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE 
                            93                            997 
[1] "DEL PEAK 42(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         151                          939 
  DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE 
                         151                          939 
[1] "DEL PEAK 43(19Q13.41) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE 
                            366                             724 
  DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE 
                            366                             724 
[1] "DEL PEAK 44(19Q13.43) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE 
                            354                             736 
  DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE 
                            354                             736 
[1] "DEL PEAK 45(22Q13.32) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE 
                            289                             801 
  DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE 
                            289                             801 
[1] "DEL PEAK 46(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE 
                          228                           862 
  DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE 
                          228                           862 
[1] "DEL PEAK 47(XQ21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE 
                          184                           906 
  DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE 
                          184                           906 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 12 rows and 1090 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MIR_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MIR_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 1090 columns, 0 survival variables, and 12 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [9] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[11] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIR_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIR_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P36.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED       24     20     22     17
  AMP PEAK  1(1P36.21) WILD-TYPE    123     76    130     96
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           24                            123
  CLUS_2                           20                             76
  CLUS_3                           22                            130
  CLUS_4                           17                             96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED       25     15     12     31
  AMP PEAK  1(1P36.21) WILD-TYPE    123     87     88    127
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           25                            123
  CLUS_2                           15                             87
  CLUS_3                           12                             88
  CLUS_4                           31                            127
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED       23     37     12     17
  AMP PEAK  1(1P36.21) WILD-TYPE    133    146     75    103
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           23                            133
  CLUS_2                           37                            146
  CLUS_3                           12                             75
  CLUS_4                           17                            103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED       46     15     28
  AMP PEAK  1(1P36.21) WILD-TYPE    247    109    101
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           46                            247
  CLUS_2                           15                            109
  CLUS_3                           28                            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED       91      7      6
  AMP PEAK  1(1P36.21) WILD-TYPE    442    535      9
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           91                            442
  CLUS_2                            7                            535
  CLUS_3                            6                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED       22      5      0      0
  AMP PEAK  1(1P36.21) WILD-TYPE    162    232     64    165
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           22                            162
  CLUS_2                            5                            232
  CLUS_3                            0                             64
  CLUS_4                            0                            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED       37      3      0
  AMP PEAK  1(1P36.21) WILD-TYPE    196    232    192
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           37                            196
  CLUS_2                            3                            232
  CLUS_3                            0                            192
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED       35      5      0
  AMP PEAK  1(1P36.21) WILD-TYPE    168    185    267
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                           35                            168
  CLUS_2                            5                            185
  CLUS_3                            0                            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED        7      4      1      0
  AMP PEAK  1(1P36.21) WILD-TYPE    130    103    182     82
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            7                            130
  CLUS_2                            4                            103
  CLUS_3                            1                            182
  CLUS_4                            0                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED        3      0      9
  AMP PEAK  1(1P36.21) WILD-TYPE    219    184     94
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            3                            219
  CLUS_2                            0                            184
  CLUS_3                            9                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.21) MUTATED        9      1      2
  AMP PEAK  1(1P36.21) WILD-TYPE    176    160    157
D1V11, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            9                            176
  CLUS_2                            1                            160
  CLUS_3                            2                            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.21) MUTATED        1      2      1      8
  AMP PEAK  1(1P36.21) WILD-TYPE     90    135    187     81
D1V12, multiclass
        clus
vv       AMP PEAK  1(1P36.21) MUTATED AMP PEAK  1(1P36.21) WILD-TYPE
  CLUS_1                            1                             90
  CLUS_2                            2                            135
  CLUS_3                            1                            187
  CLUS_4                            8                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1Q22) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED       26     28     19     19
  AMP PEAK  2(1Q22) WILD-TYPE    121     68    133     94
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        26                         121
  CLUS_2                        28                          68
  CLUS_3                        19                         133
  CLUS_4                        19                          94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED       27     25      9     31
  AMP PEAK  2(1Q22) WILD-TYPE    121     77     91    127
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        27                         121
  CLUS_2                        25                          77
  CLUS_3                         9                          91
  CLUS_4                        31                         127
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED       18     40     13     26
  AMP PEAK  2(1Q22) WILD-TYPE    138    143     74     94
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        18                         138
  CLUS_2                        40                         143
  CLUS_3                        13                          74
  CLUS_4                        26                          94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       57     17     23
  AMP PEAK  2(1Q22) WILD-TYPE    236    107    106
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        57                         236
  CLUS_2                        17                         107
  CLUS_3                        23                         106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       92     45      7
  AMP PEAK  2(1Q22) WILD-TYPE    441    497      8
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        92                         441
  CLUS_2                        45                         497
  CLUS_3                         7                           8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED       31     19      1      8
  AMP PEAK  2(1Q22) WILD-TYPE    153    218     63    157
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        31                         153
  CLUS_2                        19                         218
  CLUS_3                         1                          63
  CLUS_4                         8                         157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       44     15     11
  AMP PEAK  2(1Q22) WILD-TYPE    189    220    181
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        44                         189
  CLUS_2                        15                         220
  CLUS_3                        11                         181
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       37     19     14
  AMP PEAK  2(1Q22) WILD-TYPE    166    171    253
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        37                         166
  CLUS_2                        19                         171
  CLUS_3                        14                         253
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED       15      9     13      5
  AMP PEAK  2(1Q22) WILD-TYPE    122     98    170     77
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        15                         122
  CLUS_2                         9                          98
  CLUS_3                        13                         170
  CLUS_4                         5                          77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       14     14     14
  AMP PEAK  2(1Q22) WILD-TYPE    208    170     89
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        14                         208
  CLUS_2                        14                         170
  CLUS_3                        14                          89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1Q22) MUTATED       19      8     15
  AMP PEAK  2(1Q22) WILD-TYPE    166    153    144
D2V11, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                        19                         166
  CLUS_2                         8                         153
  CLUS_3                        15                         144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1Q22) MUTATED        9      8     14     11
  AMP PEAK  2(1Q22) WILD-TYPE     82    129    174     78
D2V12, multiclass
        clus
vv       AMP PEAK  2(1Q22) MUTATED AMP PEAK  2(1Q22) WILD-TYPE
  CLUS_1                         9                          82
  CLUS_2                         8                         129
  CLUS_3                        14                         174
  CLUS_4                        11                          78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED       38     30     42     30
  AMP PEAK  3(1Q32.1) WILD-TYPE    109     66    110     83
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          38                           109
  CLUS_2                          30                            66
  CLUS_3                          42                           110
  CLUS_4                          30                            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED       37     22     25     56
  AMP PEAK  3(1Q32.1) WILD-TYPE    111     80     75    102
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          37                           111
  CLUS_2                          22                            80
  CLUS_3                          25                            75
  CLUS_4                          56                           102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED       35     53     28     35
  AMP PEAK  3(1Q32.1) WILD-TYPE    121    130     59     85
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          35                           121
  CLUS_2                          53                           130
  CLUS_3                          28                            59
  CLUS_4                          35                            85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED       85     26     40
  AMP PEAK  3(1Q32.1) WILD-TYPE    208     98     89
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          85                           208
  CLUS_2                          26                            98
  CLUS_3                          40                            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED      163     35      7
  AMP PEAK  3(1Q32.1) WILD-TYPE    370    507      8
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                         163                           370
  CLUS_2                          35                           507
  CLUS_3                           7                             8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED       53     12      6      6
  AMP PEAK  3(1Q32.1) WILD-TYPE    131    225     58    159
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          53                           131
  CLUS_2                          12                           225
  CLUS_3                           6                            58
  CLUS_4                           6                           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED       62      6     16
  AMP PEAK  3(1Q32.1) WILD-TYPE    171    229    176
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          62                           171
  CLUS_2                           6                           229
  CLUS_3                          16                           176
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED       58      8     18
  AMP PEAK  3(1Q32.1) WILD-TYPE    145    182    249
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          58                           145
  CLUS_2                           8                           182
  CLUS_3                          18                           249
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED       17      7     16      5
  AMP PEAK  3(1Q32.1) WILD-TYPE    120    100    167     77
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          17                           120
  CLUS_2                           7                           100
  CLUS_3                          16                           167
  CLUS_4                           5                            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED        8     14     23
  AMP PEAK  3(1Q32.1) WILD-TYPE    214    170     80
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                           8                           214
  CLUS_2                          14                           170
  CLUS_3                          23                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q32.1) MUTATED       24      4     17
  AMP PEAK  3(1Q32.1) WILD-TYPE    161    157    142
D3V11, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                          24                           161
  CLUS_2                           4                           157
  CLUS_3                          17                           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q32.1) MUTATED        5      3     14     23
  AMP PEAK  3(1Q32.1) WILD-TYPE     86    134    174     66
D3V12, multiclass
        clus
vv       AMP PEAK  3(1Q32.1) MUTATED AMP PEAK  3(1Q32.1) WILD-TYPE
  CLUS_1                           5                            86
  CLUS_2                           3                           134
  CLUS_3                          14                           174
  CLUS_4                          23                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED       22     25     24     19
  AMP PEAK  4(1Q44) WILD-TYPE    125     71    128     94
D4V1, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        22                         125
  CLUS_2                        25                          71
  CLUS_3                        24                         128
  CLUS_4                        19                          94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED       25     21     14     30
  AMP PEAK  4(1Q44) WILD-TYPE    123     81     86    128
D4V2, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        25                         123
  CLUS_2                        21                          81
  CLUS_3                        14                          86
  CLUS_4                        30                         128
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED       22     35     15     23
  AMP PEAK  4(1Q44) WILD-TYPE    134    148     72     97
D4V3, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        22                         134
  CLUS_2                        35                         148
  CLUS_3                        15                          72
  CLUS_4                        23                          97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED       54     16     25
  AMP PEAK  4(1Q44) WILD-TYPE    239    108    104
D4V4, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        54                         239
  CLUS_2                        16                         108
  CLUS_3                        25                         104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED       96     28      5
  AMP PEAK  4(1Q44) WILD-TYPE    437    514     10
D4V5, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        96                         437
  CLUS_2                        28                         514
  CLUS_3                         5                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED       27     12      1      5
  AMP PEAK  4(1Q44) WILD-TYPE    157    225     63    160
D4V6, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        27                         157
  CLUS_2                        12                         225
  CLUS_3                         1                          63
  CLUS_4                         5                         160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED       39      7     10
  AMP PEAK  4(1Q44) WILD-TYPE    194    228    182
D4V7, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        39                         194
  CLUS_2                         7                         228
  CLUS_3                        10                         182
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED       35      9     12
  AMP PEAK  4(1Q44) WILD-TYPE    168    181    255
D4V8, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        35                         168
  CLUS_2                         9                         181
  CLUS_3                        12                         255
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED       12      5     10      3
  AMP PEAK  4(1Q44) WILD-TYPE    125    102    173     79
D4V9, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        12                         125
  CLUS_2                         5                         102
  CLUS_3                        10                         173
  CLUS_4                         3                          79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED        8     10     12
  AMP PEAK  4(1Q44) WILD-TYPE    214    174     91
D4V10, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                         8                         214
  CLUS_2                        10                         174
  CLUS_3                        12                          91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q44) MUTATED       13      4     13
  AMP PEAK  4(1Q44) WILD-TYPE    172    157    146
D4V11, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        13                         172
  CLUS_2                         4                         157
  CLUS_3                        13                         146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q44) MUTATED        4      4     12     10
  AMP PEAK  4(1Q44) WILD-TYPE     87    133    176     79
D4V12, multiclass
        clus
vv       AMP PEAK  4(1Q44) MUTATED AMP PEAK  4(1Q44) WILD-TYPE
  CLUS_1                         4                          87
  CLUS_2                         4                         133
  CLUS_3                        12                         176
  CLUS_4                        10                          79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(2P24.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED       11     12      8     14
  AMP PEAK  5(2P24.3) WILD-TYPE    136     84    144     99
D5V1, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          11                           136
  CLUS_2                          12                            84
  CLUS_3                           8                           144
  CLUS_4                          14                            99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED       11     17      4     13
  AMP PEAK  5(2P24.3) WILD-TYPE    137     85     96    145
D5V2, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          11                           137
  CLUS_2                          17                            85
  CLUS_3                           4                            96
  CLUS_4                          13                           145
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED        9     19      8     12
  AMP PEAK  5(2P24.3) WILD-TYPE    147    164     79    108
D5V3, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                           9                           147
  CLUS_2                          19                           164
  CLUS_3                           8                            79
  CLUS_4                          12                           108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED       27     10     11
  AMP PEAK  5(2P24.3) WILD-TYPE    266    114    118
D5V4, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          27                           266
  CLUS_2                          10                           114
  CLUS_3                          11                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED       44     26      2
  AMP PEAK  5(2P24.3) WILD-TYPE    489    516     13
D5V5, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          44                           489
  CLUS_2                          26                           516
  CLUS_3                           2                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED       15     12      2      4
  AMP PEAK  5(2P24.3) WILD-TYPE    169    225     62    161
D5V6, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          15                           169
  CLUS_2                          12                           225
  CLUS_3                           2                            62
  CLUS_4                           4                           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED       23      8      7
  AMP PEAK  5(2P24.3) WILD-TYPE    210    227    185
D5V7, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          23                           210
  CLUS_2                           8                           227
  CLUS_3                           7                           185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED       20     10      8
  AMP PEAK  5(2P24.3) WILD-TYPE    183    180    259
D5V8, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                          20                           183
  CLUS_2                          10                           180
  CLUS_3                           8                           259
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED        7      7      7      2
  AMP PEAK  5(2P24.3) WILD-TYPE    130    100    176     80
D5V9, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                           7                           130
  CLUS_2                           7                           100
  CLUS_3                           7                           176
  CLUS_4                           2                            80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED        8      5     10
  AMP PEAK  5(2P24.3) WILD-TYPE    214    179     93
D5V10, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                           8                           214
  CLUS_2                           5                           179
  CLUS_3                          10                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2P24.3) MUTATED        9      9      5
  AMP PEAK  5(2P24.3) WILD-TYPE    176    152    154
D5V11, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                           9                           176
  CLUS_2                           9                           152
  CLUS_3                           5                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2P24.3) MUTATED        3      7      5      8
  AMP PEAK  5(2P24.3) WILD-TYPE     88    130    183     81
D5V12, multiclass
        clus
vv       AMP PEAK  5(2P24.3) MUTATED AMP PEAK  5(2P24.3) WILD-TYPE
  CLUS_1                           3                            88
  CLUS_2                           7                           130
  CLUS_3                           5                           183
  CLUS_4                           8                            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED       15     21      7     13
  AMP PEAK  6(3P25.3) WILD-TYPE    132     75    145    100
D6V1, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          15                           132
  CLUS_2                          21                            75
  CLUS_3                           7                           145
  CLUS_4                          13                           100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED       10     19      7     20
  AMP PEAK  6(3P25.3) WILD-TYPE    138     83     93    138
D6V2, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          10                           138
  CLUS_2                          19                            83
  CLUS_3                           7                            93
  CLUS_4                          20                           138
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED       14     22     11     10
  AMP PEAK  6(3P25.3) WILD-TYPE    142    161     76    110
D6V3, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          14                           142
  CLUS_2                          22                           161
  CLUS_3                          11                            76
  CLUS_4                          10                           110
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED       35      6     16
  AMP PEAK  6(3P25.3) WILD-TYPE    258    118    113
D6V4, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          35                           258
  CLUS_2                           6                           118
  CLUS_3                          16                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED       52     32      1
  AMP PEAK  6(3P25.3) WILD-TYPE    481    510     14
D6V5, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          52                           481
  CLUS_2                          32                           510
  CLUS_3                           1                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED       12     20      1      3
  AMP PEAK  6(3P25.3) WILD-TYPE    172    217     63    162
D6V6, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          12                           172
  CLUS_2                          20                           217
  CLUS_3                           1                            63
  CLUS_4                           3                           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED       22     15      8
  AMP PEAK  6(3P25.3) WILD-TYPE    211    220    184
D6V7, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          22                           211
  CLUS_2                          15                           220
  CLUS_3                           8                           184
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED       20     15     10
  AMP PEAK  6(3P25.3) WILD-TYPE    183    175    257
D6V8, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          20                           183
  CLUS_2                          15                           175
  CLUS_3                          10                           257
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED       10      5      6      4
  AMP PEAK  6(3P25.3) WILD-TYPE    127    102    177     78
D6V9, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          10                           127
  CLUS_2                           5                           102
  CLUS_3                           6                           177
  CLUS_4                           4                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED       12      7      6
  AMP PEAK  6(3P25.3) WILD-TYPE    210    177     97
D6V10, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          12                           210
  CLUS_2                           7                           177
  CLUS_3                           6                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3P25.3) MUTATED        9      8      8
  AMP PEAK  6(3P25.3) WILD-TYPE    176    153    151
D6V11, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                           9                           176
  CLUS_2                           8                           153
  CLUS_3                           8                           151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3P25.3) MUTATED        8      5      8      4
  AMP PEAK  6(3P25.3) WILD-TYPE     83    132    180     85
D6V12, multiclass
        clus
vv       AMP PEAK  6(3P25.3) MUTATED AMP PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                           8                            83
  CLUS_2                           5                           132
  CLUS_3                           8                           180
  CLUS_4                           4                            85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(3Q26.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED       27     28     19     27
  AMP PEAK  7(3Q26.33) WILD-TYPE    120     68    133     86
D7V1, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           27                            120
  CLUS_2                           28                             68
  CLUS_3                           19                            133
  CLUS_4                           27                             86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED       25     25     15     36
  AMP PEAK  7(3Q26.33) WILD-TYPE    123     77     85    122
D7V2, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           25                            123
  CLUS_2                           25                             77
  CLUS_3                           15                             85
  CLUS_4                           36                            122
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED       29     42     19     19
  AMP PEAK  7(3Q26.33) WILD-TYPE    127    141     68    101
D7V3, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           29                            127
  CLUS_2                           42                            141
  CLUS_3                           19                             68
  CLUS_4                           19                            101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED       59     17     33
  AMP PEAK  7(3Q26.33) WILD-TYPE    234    107     96
D7V4, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           59                            234
  CLUS_2                           17                            107
  CLUS_3                           33                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED      108     22      2
  AMP PEAK  7(3Q26.33) WILD-TYPE    425    520     13
D7V5, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                          108                            425
  CLUS_2                           22                            520
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED       31      9      2      3
  AMP PEAK  7(3Q26.33) WILD-TYPE    153    228     62    162
D7V6, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           31                            153
  CLUS_2                            9                            228
  CLUS_3                            2                             62
  CLUS_4                            3                            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED       45      7      4
  AMP PEAK  7(3Q26.33) WILD-TYPE    188    228    188
D7V7, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           45                            188
  CLUS_2                            7                            228
  CLUS_3                            4                            188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED       41      9      6
  AMP PEAK  7(3Q26.33) WILD-TYPE    162    181    261
D7V8, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           41                            162
  CLUS_2                            9                            181
  CLUS_3                            6                            261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED       10      7      1      3
  AMP PEAK  7(3Q26.33) WILD-TYPE    127    100    182     79
D7V9, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           10                            127
  CLUS_2                            7                            100
  CLUS_3                            1                            182
  CLUS_4                            3                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED        9      3      9
  AMP PEAK  7(3Q26.33) WILD-TYPE    213    181     94
D7V10, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                            9                            213
  CLUS_2                            3                            181
  CLUS_3                            9                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(3Q26.33) MUTATED       14      4      3
  AMP PEAK  7(3Q26.33) WILD-TYPE    171    157    156
D7V11, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                           14                            171
  CLUS_2                            4                            157
  CLUS_3                            3                            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(3Q26.33) MUTATED        6      1      5      9
  AMP PEAK  7(3Q26.33) WILD-TYPE     85    136    183     80
D7V12, multiclass
        clus
vv       AMP PEAK  7(3Q26.33) MUTATED AMP PEAK  7(3Q26.33) WILD-TYPE
  CLUS_1                            6                             85
  CLUS_2                            1                            136
  CLUS_3                            5                            183
  CLUS_4                            9                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED       11     12     13      6
  AMP PEAK  8(4P16.3) WILD-TYPE    136     84    139    107
D8V1, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          11                           136
  CLUS_2                          12                            84
  CLUS_3                          13                           139
  CLUS_4                           6                           107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED       10     10     10     12
  AMP PEAK  8(4P16.3) WILD-TYPE    138     92     90    146
D8V2, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          10                           138
  CLUS_2                          10                            92
  CLUS_3                          10                            90
  CLUS_4                          12                           146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED       14     18      6      9
  AMP PEAK  8(4P16.3) WILD-TYPE    142    165     81    111
D8V3, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          14                           142
  CLUS_2                          18                           165
  CLUS_3                           6                            81
  CLUS_4                           9                           111
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED       19     11     17
  AMP PEAK  8(4P16.3) WILD-TYPE    274    113    112
D8V4, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          19                           274
  CLUS_2                          11                           113
  CLUS_3                          17                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED       48     20      2
  AMP PEAK  8(4P16.3) WILD-TYPE    485    522     13
D8V5, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          48                           485
  CLUS_2                          20                           522
  CLUS_3                           2                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED       15     13      2      1
  AMP PEAK  8(4P16.3) WILD-TYPE    169    224     62    164
D8V6, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          15                           169
  CLUS_2                          13                           224
  CLUS_3                           2                            62
  CLUS_4                           1                           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED       25     10      3
  AMP PEAK  8(4P16.3) WILD-TYPE    208    225    189
D8V7, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          25                           208
  CLUS_2                          10                           225
  CLUS_3                           3                           189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED       22     11      5
  AMP PEAK  8(4P16.3) WILD-TYPE    181    179    262
D8V8, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          22                           181
  CLUS_2                          11                           179
  CLUS_3                           5                           262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED       11      2      6      3
  AMP PEAK  8(4P16.3) WILD-TYPE    126    105    177     79
D8V9, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          11                           126
  CLUS_2                           2                           105
  CLUS_3                           6                           177
  CLUS_4                           3                            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED        9      6      7
  AMP PEAK  8(4P16.3) WILD-TYPE    213    178     96
D8V10, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                           9                           213
  CLUS_2                           6                           178
  CLUS_3                           7                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(4P16.3) MUTATED       10      7      5
  AMP PEAK  8(4P16.3) WILD-TYPE    175    154    154
D8V11, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                          10                           175
  CLUS_2                           7                           154
  CLUS_3                           5                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(4P16.3) MUTATED        6      5      5      6
  AMP PEAK  8(4P16.3) WILD-TYPE     85    132    183     83
D8V12, multiclass
        clus
vv       AMP PEAK  8(4P16.3) MUTATED AMP PEAK  8(4P16.3) WILD-TYPE
  CLUS_1                           6                            85
  CLUS_2                           5                           132
  CLUS_3                           5                           183
  CLUS_4                           6                            83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(4Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED       22     32     20     25
  AMP PEAK  9(4Q12) WILD-TYPE    125     64    132     88
D9V1, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        22                         125
  CLUS_2                        32                          64
  CLUS_3                        20                         132
  CLUS_4                        25                          88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED       18     31     16     34
  AMP PEAK  9(4Q12) WILD-TYPE    130     71     84    124
D9V2, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        18                         130
  CLUS_2                        31                          71
  CLUS_3                        16                          84
  CLUS_4                        34                         124
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED       24     39     18     23
  AMP PEAK  9(4Q12) WILD-TYPE    132    144     69     97
D9V3, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        24                         132
  CLUS_2                        39                         144
  CLUS_3                        18                          69
  CLUS_4                        23                          97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED       60     19     25
  AMP PEAK  9(4Q12) WILD-TYPE    233    105    104
D9V4, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        60                         233
  CLUS_2                        19                         105
  CLUS_3                        25                         104
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED      100     35      3
  AMP PEAK  9(4Q12) WILD-TYPE    433    507     12
D9V5, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                       100                         433
  CLUS_2                        35                         507
  CLUS_3                         3                          12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED       31     21      2      1
  AMP PEAK  9(4Q12) WILD-TYPE    153    216     62    164
D9V6, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        31                         153
  CLUS_2                        21                         216
  CLUS_3                         2                          62
  CLUS_4                         1                         164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED       44     10      5
  AMP PEAK  9(4Q12) WILD-TYPE    189    225    187
D9V7, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        44                         189
  CLUS_2                        10                         225
  CLUS_3                         5                         187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED       37     16      6
  AMP PEAK  9(4Q12) WILD-TYPE    166    174    261
D9V8, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        37                         166
  CLUS_2                        16                         174
  CLUS_3                         6                         261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED        6     15      7      2
  AMP PEAK  9(4Q12) WILD-TYPE    131     92    176     80
D9V9, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                         6                         131
  CLUS_2                        15                          92
  CLUS_3                         7                         176
  CLUS_4                         2                          80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED        7      7     16
  AMP PEAK  9(4Q12) WILD-TYPE    215    177     87
D9V10, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                         7                         215
  CLUS_2                         7                         177
  CLUS_3                        16                          87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(4Q12) MUTATED       12      9      9
  AMP PEAK  9(4Q12) WILD-TYPE    173    152    150
D9V11, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                        12                         173
  CLUS_2                         9                         152
  CLUS_3                         9                         150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(4Q12) MUTATED        3      8      6     13
  AMP PEAK  9(4Q12) WILD-TYPE     88    129    182     76
D9V12, multiclass
        clus
vv       AMP PEAK  9(4Q12) MUTATED AMP PEAK  9(4Q12) WILD-TYPE
  CLUS_1                         3                          88
  CLUS_2                         8                         129
  CLUS_3                         6                         182
  CLUS_4                        13                          76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED       24      9      9     11
  AMP PEAK 10(5P15.33) WILD-TYPE    123     87    143    102
D10V1, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           24                            123
  CLUS_2                            9                             87
  CLUS_3                            9                            143
  CLUS_4                           11                            102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED       23      8      6     16
  AMP PEAK 10(5P15.33) WILD-TYPE    125     94     94    142
D10V2, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           23                            125
  CLUS_2                            8                             94
  CLUS_3                            6                             94
  CLUS_4                           16                            142
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED       20     13      7     18
  AMP PEAK 10(5P15.33) WILD-TYPE    136    170     80    102
D10V3, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           20                            136
  CLUS_2                           13                            170
  CLUS_3                            7                             80
  CLUS_4                           18                            102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED       26     18     14
  AMP PEAK 10(5P15.33) WILD-TYPE    267    106    115
D10V4, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           26                            267
  CLUS_2                           18                            106
  CLUS_3                           14                            115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED       55     19      2
  AMP PEAK 10(5P15.33) WILD-TYPE    478    523     13
D10V5, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           55                            478
  CLUS_2                           19                            523
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED       12      7      4      1
  AMP PEAK 10(5P15.33) WILD-TYPE    172    230     60    164
D10V6, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           12                            172
  CLUS_2                            7                            230
  CLUS_3                            4                             60
  CLUS_4                            1                            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED       21      3      3
  AMP PEAK 10(5P15.33) WILD-TYPE    212    232    189
D10V7, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           21                            212
  CLUS_2                            3                            232
  CLUS_3                            3                            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED       18      5      4
  AMP PEAK 10(5P15.33) WILD-TYPE    185    185    263
D10V8, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                           18                            185
  CLUS_2                            5                            185
  CLUS_3                            4                            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED        5      6      5      0
  AMP PEAK 10(5P15.33) WILD-TYPE    132    101    178     82
D10V9, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                            5                            132
  CLUS_2                            6                            101
  CLUS_3                            5                            178
  CLUS_4                            0                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED        3      4      9
  AMP PEAK 10(5P15.33) WILD-TYPE    219    180     94
D10V10, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                            3                            219
  CLUS_2                            4                            180
  CLUS_3                            9                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(5P15.33) MUTATED        9      5      2
  AMP PEAK 10(5P15.33) WILD-TYPE    176    156    157
D10V11, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                            9                            176
  CLUS_2                            5                            156
  CLUS_3                            2                            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(5P15.33) MUTATED        1      5      3      7
  AMP PEAK 10(5P15.33) WILD-TYPE     90    132    185     82
D10V12, multiclass
        clus
vv       AMP PEAK 10(5P15.33) MUTATED AMP PEAK 10(5P15.33) WILD-TYPE
  CLUS_1                            1                             90
  CLUS_2                            5                            132
  CLUS_3                            3                            185
  CLUS_4                            7                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED      139     68    147     89
  AMP PEAK 11(7P11.2) WILD-TYPE      8     28      5     24
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         139                             8
  CLUS_2                          68                            28
  CLUS_3                         147                             5
  CLUS_4                          89                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED      136     60     99    148
  AMP PEAK 11(7P11.2) WILD-TYPE     12     42      1     10
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         136                            12
  CLUS_2                          60                            42
  CLUS_3                          99                             1
  CLUS_4                         148                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED      151    146     73    110
  AMP PEAK 11(7P11.2) WILD-TYPE      5     37     14     10
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         151                             5
  CLUS_2                         146                            37
  CLUS_3                          73                            14
  CLUS_4                         110                            10
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      234    120    126
  AMP PEAK 11(7P11.2) WILD-TYPE     59      4      3
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         234                            59
  CLUS_2                         120                             4
  CLUS_3                         126                             3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      519    106     10
  AMP PEAK 11(7P11.2) WILD-TYPE     14    436      5
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         519                            14
  CLUS_2                         106                           436
  CLUS_3                          10                             5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED      167     43     26     14
  AMP PEAK 11(7P11.2) WILD-TYPE     17    194     38    151
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         167                            17
  CLUS_2                          43                           194
  CLUS_3                          26                            38
  CLUS_4                          14                           151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      185     37     37
  AMP PEAK 11(7P11.2) WILD-TYPE     48    198    155
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         185                            48
  CLUS_2                          37                           198
  CLUS_3                          37                           155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED      183     30     46
  AMP PEAK 11(7P11.2) WILD-TYPE     20    160    221
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                         183                            20
  CLUS_2                          30                           160
  CLUS_3                          46                           221
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       44     37     32     13
  AMP PEAK 11(7P11.2) WILD-TYPE     93     70    151     69
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          44                            93
  CLUS_2                          37                            70
  CLUS_3                          32                           151
  CLUS_4                          13                            69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       37     28     61
  AMP PEAK 11(7P11.2) WILD-TYPE    185    156     42
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          37                           185
  CLUS_2                          28                           156
  CLUS_3                          61                            42
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(7P11.2) MUTATED       66     26     33
  AMP PEAK 11(7P11.2) WILD-TYPE    119    135    126
D11V11, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          66                           119
  CLUS_2                          26                           135
  CLUS_3                          33                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(7P11.2) MUTATED       13     22     32     58
  AMP PEAK 11(7P11.2) WILD-TYPE     78    115    156     31
D11V12, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          13                            78
  CLUS_2                          22                           115
  CLUS_3                          32                           156
  CLUS_4                          58                            31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7Q11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED      133     64    124     82
  AMP PEAK 12(7Q11.21) WILD-TYPE     14     32     28     31
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          133                             14
  CLUS_2                           64                             32
  CLUS_3                          124                             28
  CLUS_4                           82                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED      129     55     82    137
  AMP PEAK 12(7Q11.21) WILD-TYPE     19     47     18     21
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          129                             19
  CLUS_2                           55                             47
  CLUS_3                           82                             18
  CLUS_4                          137                             21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED      141    133     63    103
  AMP PEAK 12(7Q11.21) WILD-TYPE     15     50     24     17
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          141                             15
  CLUS_2                          133                             50
  CLUS_3                           63                             24
  CLUS_4                          103                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED      216    114    110
  AMP PEAK 12(7Q11.21) WILD-TYPE     77     10     19
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          216                             77
  CLUS_2                          114                             10
  CLUS_3                          110                             19
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED      475     96     10
  AMP PEAK 12(7Q11.21) WILD-TYPE     58    446      5
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          475                             58
  CLUS_2                           96                            446
  CLUS_3                           10                              5
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED      155     39     23     14
  AMP PEAK 12(7Q11.21) WILD-TYPE     29    198     41    151
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          155                             29
  CLUS_2                           39                            198
  CLUS_3                           23                             41
  CLUS_4                           14                            151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED      164     34     37
  AMP PEAK 12(7Q11.21) WILD-TYPE     69    201    155
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          164                             69
  CLUS_2                           34                            201
  CLUS_3                           37                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED      163     26     46
  AMP PEAK 12(7Q11.21) WILD-TYPE     40    164    221
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                          163                             40
  CLUS_2                           26                            164
  CLUS_3                           46                            221
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED       40     32     31     12
  AMP PEAK 12(7Q11.21) WILD-TYPE     97     75    152     70
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                           40                             97
  CLUS_2                           32                             75
  CLUS_3                           31                            152
  CLUS_4                           12                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED       34     27     54
  AMP PEAK 12(7Q11.21) WILD-TYPE    188    157     49
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                           34                            188
  CLUS_2                           27                            157
  CLUS_3                           54                             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7Q11.21) MUTATED       59     22     33
  AMP PEAK 12(7Q11.21) WILD-TYPE    126    139    126
D12V11, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                           59                            126
  CLUS_2                           22                            139
  CLUS_3                           33                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7Q11.21) MUTATED       11     20     32     51
  AMP PEAK 12(7Q11.21) WILD-TYPE     80    117    156     38
D12V12, multiclass
        clus
vv       AMP PEAK 12(7Q11.21) MUTATED AMP PEAK 12(7Q11.21) WILD-TYPE
  CLUS_1                           11                             80
  CLUS_2                           20                            117
  CLUS_3                           32                            156
  CLUS_4                           51                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED      131     64    134     89
  AMP PEAK 13(7Q21.2) WILD-TYPE     16     32     18     24
D13V1, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         131                            16
  CLUS_2                          64                            32
  CLUS_3                         134                            18
  CLUS_4                          89                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED      126     62     89    141
  AMP PEAK 13(7Q21.2) WILD-TYPE     22     40     11     17
D13V2, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         126                            22
  CLUS_2                          62                            40
  CLUS_3                          89                            11
  CLUS_4                         141                            17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED      138    142     70    102
  AMP PEAK 13(7Q21.2) WILD-TYPE     18     41     17     18
D13V3, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         138                            18
  CLUS_2                         142                            41
  CLUS_3                          70                            17
  CLUS_4                         102                            18
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED      224    111    117
  AMP PEAK 13(7Q21.2) WILD-TYPE     69     13     12
D13V4, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         224                            69
  CLUS_2                         111                            13
  CLUS_3                         117                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED      486    139     11
  AMP PEAK 13(7Q21.2) WILD-TYPE     47    403      4
D13V5, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         486                            47
  CLUS_2                         139                           403
  CLUS_3                          11                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED      158     69     25     24
  AMP PEAK 13(7Q21.2) WILD-TYPE     26    168     39    141
D13V6, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         158                            26
  CLUS_2                          69                           168
  CLUS_3                          25                            39
  CLUS_4                          24                           141
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED      175     57     50
  AMP PEAK 13(7Q21.2) WILD-TYPE     58    178    142
D13V7, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         175                            58
  CLUS_2                          57                           178
  CLUS_3                          50                           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED      171     48     63
  AMP PEAK 13(7Q21.2) WILD-TYPE     32    142    204
D13V8, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                         171                            32
  CLUS_2                          48                           142
  CLUS_3                          63                           204
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED       51     41     46     16
  AMP PEAK 13(7Q21.2) WILD-TYPE     86     66    137     66
D13V9, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          51                            86
  CLUS_2                          41                            66
  CLUS_3                          46                           137
  CLUS_4                          16                            66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED       52     43     59
  AMP PEAK 13(7Q21.2) WILD-TYPE    170    141     44
D13V10, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          52                           170
  CLUS_2                          43                           141
  CLUS_3                          59                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7Q21.2) MUTATED       72     33     48
  AMP PEAK 13(7Q21.2) WILD-TYPE    113    128    111
D13V11, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          72                           113
  CLUS_2                          33                           128
  CLUS_3                          48                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7Q21.2) MUTATED       20     28     50     55
  AMP PEAK 13(7Q21.2) WILD-TYPE     71    109    138     34
D13V12, multiclass
        clus
vv       AMP PEAK 13(7Q21.2) MUTATED AMP PEAK 13(7Q21.2) WILD-TYPE
  CLUS_1                          20                            71
  CLUS_2                          28                           109
  CLUS_3                          50                           138
  CLUS_4                          55                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(7Q31.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED      131     66    126     89
  AMP PEAK 14(7Q31.2) WILD-TYPE     16     30     26     24
D14V1, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         131                            16
  CLUS_2                          66                            30
  CLUS_3                         126                            26
  CLUS_4                          89                            24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED      130     63     83    136
  AMP PEAK 14(7Q31.2) WILD-TYPE     18     39     17     22
D14V2, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         130                            18
  CLUS_2                          63                            39
  CLUS_3                          83                            17
  CLUS_4                         136                            22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED      137    136     71    101
  AMP PEAK 14(7Q31.2) WILD-TYPE     19     47     16     19
D14V3, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         137                            19
  CLUS_2                         136                            47
  CLUS_3                          71                            16
  CLUS_4                         101                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED      225    109    111
  AMP PEAK 14(7Q31.2) WILD-TYPE     68     15     18
D14V4, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         225                            68
  CLUS_2                         109                            15
  CLUS_3                         111                            18
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED      478    157     11
  AMP PEAK 14(7Q31.2) WILD-TYPE     55    385      4
D14V5, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         478                            55
  CLUS_2                         157                           385
  CLUS_3                          11                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED      157     82     26     28
  AMP PEAK 14(7Q31.2) WILD-TYPE     27    155     38    137
D14V6, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         157                            27
  CLUS_2                          82                           155
  CLUS_3                          26                            38
  CLUS_4                          28                           137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED      172     68     56
  AMP PEAK 14(7Q31.2) WILD-TYPE     61    167    136
D14V7, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         172                            61
  CLUS_2                          68                           167
  CLUS_3                          56                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED      168     57     71
  AMP PEAK 14(7Q31.2) WILD-TYPE     35    133    196
D14V8, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                         168                            35
  CLUS_2                          57                           133
  CLUS_3                          71                           196
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED       56     44     52     20
  AMP PEAK 14(7Q31.2) WILD-TYPE     81     63    131     62
D14V9, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                          56                            81
  CLUS_2                          44                            63
  CLUS_3                          52                           131
  CLUS_4                          20                            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED       65     48     59
  AMP PEAK 14(7Q31.2) WILD-TYPE    157    136     44
D14V10, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                          65                           157
  CLUS_2                          48                           136
  CLUS_3                          59                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q31.2) MUTATED       76     41     54
  AMP PEAK 14(7Q31.2) WILD-TYPE    109    120    105
D14V11, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                          76                           109
  CLUS_2                          41                           120
  CLUS_3                          54                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q31.2) MUTATED       24     35     57     55
  AMP PEAK 14(7Q31.2) WILD-TYPE     67    102    131     34
D14V12, multiclass
        clus
vv       AMP PEAK 14(7Q31.2) MUTATED AMP PEAK 14(7Q31.2) WILD-TYPE
  CLUS_1                          24                            67
  CLUS_2                          35                           102
  CLUS_3                          57                           131
  CLUS_4                          55                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(7Q32.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED      131     64    129     92
  AMP PEAK 15(7Q32.3) WILD-TYPE     16     32     23     21
D15V1, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         131                            16
  CLUS_2                          64                            32
  CLUS_3                         129                            23
  CLUS_4                          92                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED      127     66     86    137
  AMP PEAK 15(7Q32.3) WILD-TYPE     21     36     14     21
D15V2, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         127                            21
  CLUS_2                          66                            36
  CLUS_3                          86                            14
  CLUS_4                         137                            21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED      137    141     71    101
  AMP PEAK 15(7Q32.3) WILD-TYPE     19     42     16     19
D15V3, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         137                            19
  CLUS_2                         141                            42
  CLUS_3                          71                            16
  CLUS_4                         101                            19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED      227    110    113
  AMP PEAK 15(7Q32.3) WILD-TYPE     66     14     16
D15V4, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         227                            66
  CLUS_2                         110                            14
  CLUS_3                         113                            16
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED      479    169     11
  AMP PEAK 15(7Q32.3) WILD-TYPE     54    373      4
D15V5, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         479                            54
  CLUS_2                         169                           373
  CLUS_3                          11                             4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED      157     87     27     29
  AMP PEAK 15(7Q32.3) WILD-TYPE     27    150     37    136
D15V6, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         157                            27
  CLUS_2                          87                           150
  CLUS_3                          27                            37
  CLUS_4                          29                           136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED      172     72     60
  AMP PEAK 15(7Q32.3) WILD-TYPE     61    163    132
D15V7, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         172                            61
  CLUS_2                          72                           163
  CLUS_3                          60                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED      168     60     76
  AMP PEAK 15(7Q32.3) WILD-TYPE     35    130    191
D15V8, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                         168                            35
  CLUS_2                          60                           130
  CLUS_3                          76                           191
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED       57     44     56     23
  AMP PEAK 15(7Q32.3) WILD-TYPE     80     63    127     59
D15V9, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                          57                            80
  CLUS_2                          44                            63
  CLUS_3                          56                           127
  CLUS_4                          23                            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED       68     52     60
  AMP PEAK 15(7Q32.3) WILD-TYPE    154    132     43
D15V10, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                          68                           154
  CLUS_2                          52                           132
  CLUS_3                          60                            43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(7Q32.3) MUTATED       78     45     56
  AMP PEAK 15(7Q32.3) WILD-TYPE    107    116    103
D15V11, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                          78                           107
  CLUS_2                          45                           116
  CLUS_3                          56                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(7Q32.3) MUTATED       28     37     59     55
  AMP PEAK 15(7Q32.3) WILD-TYPE     63    100    129     34
D15V12, multiclass
        clus
vv       AMP PEAK 15(7Q32.3) MUTATED AMP PEAK 15(7Q32.3) WILD-TYPE
  CLUS_1                          28                            63
  CLUS_2                          37                           100
  CLUS_3                          59                           129
  CLUS_4                          55                            34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED        8     25      7     21
  AMP PEAK 16(8Q24.21) WILD-TYPE    139     71    145     92
D16V1, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                            8                            139
  CLUS_2                           25                             71
  CLUS_3                            7                            145
  CLUS_4                           21                             92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       10     29      6     16
  AMP PEAK 16(8Q24.21) WILD-TYPE    138     73     94    142
D16V2, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           10                            138
  CLUS_2                           29                             73
  CLUS_3                            6                             94
  CLUS_4                           16                            142
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       11     32     11     10
  AMP PEAK 16(8Q24.21) WILD-TYPE    145    151     76    110
D16V3, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           11                            145
  CLUS_2                           32                            151
  CLUS_3                           11                             76
  CLUS_4                           10                            110
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       41     11     12
  AMP PEAK 16(8Q24.21) WILD-TYPE    252    113    117
D16V4, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           41                            252
  CLUS_2                           11                            113
  CLUS_3                           12                            117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       50    114      5
  AMP PEAK 16(8Q24.21) WILD-TYPE    483    428     10
D16V5, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           50                            483
  CLUS_2                          114                            428
  CLUS_3                            5                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       13     86      5     10
  AMP PEAK 16(8Q24.21) WILD-TYPE    171    151     59    155
D16V6, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           13                            171
  CLUS_2                           86                            151
  CLUS_3                            5                             59
  CLUS_4                           10                            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       29     61     31
  AMP PEAK 16(8Q24.21) WILD-TYPE    204    174    161
D16V7, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           29                            204
  CLUS_2                           61                            174
  CLUS_3                           31                            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       21     63     37
  AMP PEAK 16(8Q24.21) WILD-TYPE    182    127    230
D16V8, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           21                            182
  CLUS_2                           63                            127
  CLUS_3                           37                            230
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       32     22     36      8
  AMP PEAK 16(8Q24.21) WILD-TYPE    105     85    147     74
D16V9, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           32                            105
  CLUS_2                           22                             85
  CLUS_3                           36                            147
  CLUS_4                            8                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       58     30     10
  AMP PEAK 16(8Q24.21) WILD-TYPE    164    154     93
D16V10, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           58                            164
  CLUS_2                           30                            154
  CLUS_3                           10                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8Q24.21) MUTATED       37     38     23
  AMP PEAK 16(8Q24.21) WILD-TYPE    148    123    136
D16V11, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           37                            148
  CLUS_2                           38                            123
  CLUS_3                           23                            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8Q24.21) MUTATED       33     21     36      8
  AMP PEAK 16(8Q24.21) WILD-TYPE     58    116    152     81
D16V12, multiclass
        clus
vv       AMP PEAK 16(8Q24.21) MUTATED AMP PEAK 16(8Q24.21) WILD-TYPE
  CLUS_1                           33                             58
  CLUS_2                           21                            116
  CLUS_3                           36                            152
  CLUS_4                            8                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       24     28     18     17
  AMP PEAK 17(9Q34.3) WILD-TYPE    123     68    134     96
D17V1, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          24                           123
  CLUS_2                          28                            68
  CLUS_3                          18                           134
  CLUS_4                          17                            96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       23     28      9     27
  AMP PEAK 17(9Q34.3) WILD-TYPE    125     74     91    131
D17V2, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          23                           125
  CLUS_2                          28                            74
  CLUS_3                           9                            91
  CLUS_4                          27                           131
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       19     37     16     19
  AMP PEAK 17(9Q34.3) WILD-TYPE    137    146     71    101
D17V3, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          19                           137
  CLUS_2                          37                           146
  CLUS_3                          16                            71
  CLUS_4                          19                           101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       59     14     18
  AMP PEAK 17(9Q34.3) WILD-TYPE    234    110    111
D17V4, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          59                           234
  CLUS_2                          14                           110
  CLUS_3                          18                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       84     52      4
  AMP PEAK 17(9Q34.3) WILD-TYPE    449    490     11
D17V5, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          84                           449
  CLUS_2                          52                           490
  CLUS_3                           4                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       21     30      3      9
  AMP PEAK 17(9Q34.3) WILD-TYPE    163    207     61    156
D17V6, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          21                           163
  CLUS_2                          30                           207
  CLUS_3                           3                            61
  CLUS_4                           9                           156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       37     21     14
  AMP PEAK 17(9Q34.3) WILD-TYPE    196    214    178
D17V7, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          37                           196
  CLUS_2                          21                           214
  CLUS_3                          14                           178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       31     22     19
  AMP PEAK 17(9Q34.3) WILD-TYPE    172    168    248
D17V8, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          31                           172
  CLUS_2                          22                           168
  CLUS_3                          19                           248
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED       11     15     12      7
  AMP PEAK 17(9Q34.3) WILD-TYPE    126     92    171     75
D17V9, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          11                           126
  CLUS_2                          15                            92
  CLUS_3                          12                           171
  CLUS_4                           7                            75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       16     14     15
  AMP PEAK 17(9Q34.3) WILD-TYPE    206    170     88
D17V10, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          16                           206
  CLUS_2                          14                           170
  CLUS_3                          15                            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(9Q34.3) MUTATED       13     19     13
  AMP PEAK 17(9Q34.3) WILD-TYPE    172    142    146
D17V11, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                          13                           172
  CLUS_2                          19                           142
  CLUS_3                          13                           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(9Q34.3) MUTATED        5     15     14     11
  AMP PEAK 17(9Q34.3) WILD-TYPE     86    122    174     78
D17V12, multiclass
        clus
vv       AMP PEAK 17(9Q34.3) MUTATED AMP PEAK 17(9Q34.3) WILD-TYPE
  CLUS_1                           5                            86
  CLUS_2                          15                           122
  CLUS_3                          14                           174
  CLUS_4                          11                            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(10P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED        1      8      1      8
  AMP PEAK 18(10P15.1) WILD-TYPE    146     88    151    105
D18V1, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            1                            146
  CLUS_2                            8                             88
  CLUS_3                            1                            151
  CLUS_4                            8                            105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED        2     13      1      2
  AMP PEAK 18(10P15.1) WILD-TYPE    146     89     99    156
D18V2, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            2                            146
  CLUS_2                           13                             89
  CLUS_3                            1                             99
  CLUS_4                            2                            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED        1     12      3      1
  AMP PEAK 18(10P15.1) WILD-TYPE    155    171     84    119
D18V3, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            1                            155
  CLUS_2                           12                            171
  CLUS_3                            3                             84
  CLUS_4                            1                            119
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED       14      2      1
  AMP PEAK 18(10P15.1) WILD-TYPE    279    122    128
D18V4, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                           14                            279
  CLUS_2                            2                            122
  CLUS_3                            1                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED        6     82      0
  AMP PEAK 18(10P15.1) WILD-TYPE    527    460     15
D18V5, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            6                            527
  CLUS_2                           82                            460
  CLUS_3                            0                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED        2     65      4      0
  AMP PEAK 18(10P15.1) WILD-TYPE    182    172     60    165
D18V6, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            2                            182
  CLUS_2                           65                            172
  CLUS_3                            4                             60
  CLUS_4                            0                            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED        9     45     18
  AMP PEAK 18(10P15.1) WILD-TYPE    224    190    174
D18V7, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            9                            224
  CLUS_2                           45                            190
  CLUS_3                           18                            174
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED        3     50     19
  AMP PEAK 18(10P15.1) WILD-TYPE    200    140    248
D18V8, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                            3                            200
  CLUS_2                           50                            140
  CLUS_3                           19                            248
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED       18     26     21      3
  AMP PEAK 18(10P15.1) WILD-TYPE    119     81    162     79
D18V9, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                           18                            119
  CLUS_2                           26                             81
  CLUS_3                           21                            162
  CLUS_4                            3                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED       36     19     13
  AMP PEAK 18(10P15.1) WILD-TYPE    186    165     90
D18V10, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                           36                            186
  CLUS_2                           19                            165
  CLUS_3                           13                             90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(10P15.1) MUTATED       30     20     18
  AMP PEAK 18(10P15.1) WILD-TYPE    155    141    141
D18V11, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                           30                            155
  CLUS_2                           20                            141
  CLUS_3                           18                            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(10P15.1) MUTATED       25     15     21      7
  AMP PEAK 18(10P15.1) WILD-TYPE     66    122    167     82
D18V12, multiclass
        clus
vv       AMP PEAK 18(10P15.1) MUTATED AMP PEAK 18(10P15.1) WILD-TYPE
  CLUS_1                           25                             66
  CLUS_2                           15                            122
  CLUS_3                           21                            167
  CLUS_4                            7                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        7      6      7      8
  AMP PEAK 19(11P13) WILD-TYPE    140     90    145    105
D19V1, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          7                          140
  CLUS_2                          6                           90
  CLUS_3                          7                          145
  CLUS_4                          8                          105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        7      5      3     13
  AMP PEAK 19(11P13) WILD-TYPE    141     97     97    145
D19V2, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          7                          141
  CLUS_2                          5                           97
  CLUS_3                          3                           97
  CLUS_4                         13                          145
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        9     10      2      8
  AMP PEAK 19(11P13) WILD-TYPE    147    173     85    112
D19V3, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          9                          147
  CLUS_2                         10                          173
  CLUS_3                          2                           85
  CLUS_4                          8                          112
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       12     10      7
  AMP PEAK 19(11P13) WILD-TYPE    281    114    122
D19V4, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         12                          281
  CLUS_2                         10                          114
  CLUS_3                          7                          122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       26     34      0
  AMP PEAK 19(11P13) WILD-TYPE    507    508     15
D19V5, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         26                          507
  CLUS_2                         34                          508
  CLUS_3                          0                           15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        5      9      0     20
  AMP PEAK 19(11P13) WILD-TYPE    179    228     64    145
D19V6, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          5                          179
  CLUS_2                          9                          228
  CLUS_3                          0                           64
  CLUS_4                         20                          145
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       10     16     12
  AMP PEAK 19(11P13) WILD-TYPE    223    219    180
D19V7, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         10                          223
  CLUS_2                         16                          219
  CLUS_3                         12                          180
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED        8      8     22
  AMP PEAK 19(11P13) WILD-TYPE    195    182    245
D19V8, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          8                          195
  CLUS_2                          8                          182
  CLUS_3                         22                          245
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        5      5      9     10
  AMP PEAK 19(11P13) WILD-TYPE    132    102    174     72
D19V9, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          5                          132
  CLUS_2                          5                          102
  CLUS_3                          9                          174
  CLUS_4                         10                           72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED       13     14      2
  AMP PEAK 19(11P13) WILD-TYPE    209    170    101
D19V10, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                         13                          209
  CLUS_2                         14                          170
  CLUS_3                          2                          101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(11P13) MUTATED        7     11     11
  AMP PEAK 19(11P13) WILD-TYPE    178    150    148
D19V11, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          7                          178
  CLUS_2                         11                          150
  CLUS_3                         11                          148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(11P13) MUTATED        5      9     15      0
  AMP PEAK 19(11P13) WILD-TYPE     86    128    173     89
D19V12, multiclass
        clus
vv       AMP PEAK 19(11P13) MUTATED AMP PEAK 19(11P13) WILD-TYPE
  CLUS_1                          5                           86
  CLUS_2                          9                          128
  CLUS_3                         15                          173
  CLUS_4                          0                           89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(11Q24.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED        4      7      2     11
  AMP PEAK 20(11Q24.1) WILD-TYPE    143     89    150    102
D20V1, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                            4                            143
  CLUS_2                            7                             89
  CLUS_3                            2                            150
  CLUS_4                           11                            102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED        4     11      1      8
  AMP PEAK 20(11Q24.1) WILD-TYPE    144     91     99    150
D20V2, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                            4                            144
  CLUS_2                           11                             91
  CLUS_3                            1                             99
  CLUS_4                            8                            150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED        3     13      4      3
  AMP PEAK 20(11Q24.1) WILD-TYPE    153    170     83    117
D20V3, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                            3                            153
  CLUS_2                           13                            170
  CLUS_3                            4                             83
  CLUS_4                            3                            117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED       18      2      3
  AMP PEAK 20(11Q24.1) WILD-TYPE    275    122    126
D20V4, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           18                            275
  CLUS_2                            2                            122
  CLUS_3                            3                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED       20     90      2
  AMP PEAK 20(11Q24.1) WILD-TYPE    513    452     13
D20V5, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           20                            513
  CLUS_2                           90                            452
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED       10     52      2     29
  AMP PEAK 20(11Q24.1) WILD-TYPE    174    185     62    136
D20V6, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           10                            174
  CLUS_2                           52                            185
  CLUS_3                            2                             62
  CLUS_4                           29                            136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED       14     50     29
  AMP PEAK 20(11Q24.1) WILD-TYPE    219    185    163
D20V7, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           14                            219
  CLUS_2                           50                            185
  CLUS_3                           29                            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED        8     39     46
  AMP PEAK 20(11Q24.1) WILD-TYPE    195    151    221
D20V8, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                            8                            195
  CLUS_2                           39                            151
  CLUS_3                           46                            221
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED       26     15     31     15
  AMP PEAK 20(11Q24.1) WILD-TYPE    111     92    152     67
D20V9, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           26                            111
  CLUS_2                           15                             92
  CLUS_3                           31                            152
  CLUS_4                           15                             67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED       46     29     12
  AMP PEAK 20(11Q24.1) WILD-TYPE    176    155     91
D20V10, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           46                            176
  CLUS_2                           29                            155
  CLUS_3                           12                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(11Q24.1) MUTATED       31     30     26
  AMP PEAK 20(11Q24.1) WILD-TYPE    154    131    133
D20V11, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           31                            154
  CLUS_2                           30                            131
  CLUS_3                           26                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(11Q24.1) MUTATED       20     24     36      7
  AMP PEAK 20(11Q24.1) WILD-TYPE     71    113    152     82
D20V12, multiclass
        clus
vv       AMP PEAK 20(11Q24.1) MUTATED AMP PEAK 20(11Q24.1) WILD-TYPE
  CLUS_1                           20                             71
  CLUS_2                           24                            113
  CLUS_3                           36                            152
  CLUS_4                            7                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(12P13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       19     17     21     19
  AMP PEAK 21(12P13.32) WILD-TYPE    128     79    131     94
D21V1, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            19                             128
  CLUS_2                            17                              79
  CLUS_3                            21                             131
  CLUS_4                            19                              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       20     21     13     22
  AMP PEAK 21(12P13.32) WILD-TYPE    128     81     87    136
D21V2, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            20                             128
  CLUS_2                            21                              81
  CLUS_3                            13                              87
  CLUS_4                            22                             136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       18     34     12     18
  AMP PEAK 21(12P13.32) WILD-TYPE    138    149     75    102
D21V3, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            18                             138
  CLUS_2                            34                             149
  CLUS_3                            12                              75
  CLUS_4                            18                             102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       39     20     23
  AMP PEAK 21(12P13.32) WILD-TYPE    254    104    106
D21V4, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            39                             254
  CLUS_2                            20                             104
  CLUS_3                            23                             106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       74     77      1
  AMP PEAK 21(12P13.32) WILD-TYPE    459    465     14
D21V5, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            74                             459
  CLUS_2                            77                             465
  CLUS_3                             1                              14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       23     59      1      4
  AMP PEAK 21(12P13.32) WILD-TYPE    161    178     63    161
D21V6, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            23                             161
  CLUS_2                            59                             178
  CLUS_3                             1                              63
  CLUS_4                             4                             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       35     42     14
  AMP PEAK 21(12P13.32) WILD-TYPE    198    193    178
D21V7, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            35                             198
  CLUS_2                            42                             193
  CLUS_3                            14                             178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       29     43     19
  AMP PEAK 21(12P13.32) WILD-TYPE    174    147    248
D21V8, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            29                             174
  CLUS_2                            43                             147
  CLUS_3                            19                             248
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       17     26     16      9
  AMP PEAK 21(12P13.32) WILD-TYPE    120     81    167     73
D21V9, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            17                             120
  CLUS_2                            26                              81
  CLUS_3                            16                             167
  CLUS_4                             9                              73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       35     13     20
  AMP PEAK 21(12P13.32) WILD-TYPE    187    171     83
D21V10, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            35                             187
  CLUS_2                            13                             171
  CLUS_3                            20                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(12P13.32) MUTATED       30     25     13
  AMP PEAK 21(12P13.32) WILD-TYPE    155    136    146
D21V11, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            30                             155
  CLUS_2                            25                             136
  CLUS_3                            13                             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(12P13.32) MUTATED       18     19     17     14
  AMP PEAK 21(12P13.32) WILD-TYPE     73    118    171     75
D21V12, multiclass
        clus
vv       AMP PEAK 21(12P13.32) MUTATED AMP PEAK 21(12P13.32) WILD-TYPE
  CLUS_1                            18                              73
  CLUS_2                            19                             118
  CLUS_3                            17                             171
  CLUS_4                            14                              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(12Q14.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED       29     27     31     36
  AMP PEAK 22(12Q14.1) WILD-TYPE    118     69    121     77
D22V1, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           29                            118
  CLUS_2                           27                             69
  CLUS_3                           31                            121
  CLUS_4                           36                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED       31     32     19     41
  AMP PEAK 22(12Q14.1) WILD-TYPE    117     70     81    117
D22V2, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           31                            117
  CLUS_2                           32                             70
  CLUS_3                           19                             81
  CLUS_4                           41                            117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED       30     55     19     25
  AMP PEAK 22(12Q14.1) WILD-TYPE    126    128     68     95
D22V3, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           30                            126
  CLUS_2                           55                            128
  CLUS_3                           19                             68
  CLUS_4                           25                             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED       63     26     40
  AMP PEAK 22(12Q14.1) WILD-TYPE    230     98     89
D22V4, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           63                            230
  CLUS_2                           26                             98
  CLUS_3                           40                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED      137     32      2
  AMP PEAK 22(12Q14.1) WILD-TYPE    396    510     13
D22V5, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                          137                            396
  CLUS_2                           32                            510
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED       42     16      3      5
  AMP PEAK 22(12Q14.1) WILD-TYPE    142    221     61    160
D22V6, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           42                            142
  CLUS_2                           16                            221
  CLUS_3                            3                             61
  CLUS_4                            5                            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED       64     11      4
  AMP PEAK 22(12Q14.1) WILD-TYPE    169    224    188
D22V7, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           64                            169
  CLUS_2                           11                            224
  CLUS_3                            4                            188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED       58     13      8
  AMP PEAK 22(12Q14.1) WILD-TYPE    145    177    259
D22V8, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           58                            145
  CLUS_2                           13                            177
  CLUS_3                            8                            259
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED       13     15      6      3
  AMP PEAK 22(12Q14.1) WILD-TYPE    124     92    177     79
D22V9, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           13                            124
  CLUS_2                           15                             92
  CLUS_3                            6                            177
  CLUS_4                            3                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED       10      5     22
  AMP PEAK 22(12Q14.1) WILD-TYPE    212    179     81
D22V10, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           10                            212
  CLUS_2                            5                            179
  CLUS_3                           22                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(12Q14.1) MUTATED       21      8      8
  AMP PEAK 22(12Q14.1) WILD-TYPE    164    153    151
D22V11, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                           21                            164
  CLUS_2                            8                            153
  CLUS_3                            8                            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(12Q14.1) MUTATED        6      5      7     19
  AMP PEAK 22(12Q14.1) WILD-TYPE     85    132    181     70
D22V12, multiclass
        clus
vv       AMP PEAK 22(12Q14.1) MUTATED AMP PEAK 22(12Q14.1) WILD-TYPE
  CLUS_1                            6                             85
  CLUS_2                            5                            132
  CLUS_3                            7                            181
  CLUS_4                           19                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED       23     19     22     18
  AMP PEAK 23(12Q15) WILD-TYPE    124     77    130     95
D23V1, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         23                          124
  CLUS_2                         19                           77
  CLUS_3                         22                          130
  CLUS_4                         18                           95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED       25     15     11     31
  AMP PEAK 23(12Q15) WILD-TYPE    123     87     89    127
D23V2, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         25                          123
  CLUS_2                         15                           87
  CLUS_3                         11                           89
  CLUS_4                         31                          127
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED       22     31     17     21
  AMP PEAK 23(12Q15) WILD-TYPE    134    152     70     99
D23V3, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         22                          134
  CLUS_2                         31                          152
  CLUS_3                         17                           70
  CLUS_4                         21                           99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED       43     21     27
  AMP PEAK 23(12Q15) WILD-TYPE    250    103    102
D23V4, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         43                          250
  CLUS_2                         21                          103
  CLUS_3                         27                          102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED       98     13      0
  AMP PEAK 23(12Q15) WILD-TYPE    435    529     15
D23V5, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         98                          435
  CLUS_2                         13                          529
  CLUS_3                          0                           15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED       28      4      2      4
  AMP PEAK 23(12Q15) WILD-TYPE    156    233     62    161
D23V6, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         28                          156
  CLUS_2                          4                          233
  CLUS_3                          2                           62
  CLUS_4                          4                          161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED       34      4      4
  AMP PEAK 23(12Q15) WILD-TYPE    199    231    188
D23V7, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         34                          199
  CLUS_2                          4                          231
  CLUS_3                          4                          188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED       34      1      7
  AMP PEAK 23(12Q15) WILD-TYPE    169    189    260
D23V8, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         34                          169
  CLUS_2                          1                          189
  CLUS_3                          7                          260
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED        8      3      4      3
  AMP PEAK 23(12Q15) WILD-TYPE    129    104    179     79
D23V9, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                          8                          129
  CLUS_2                          3                          104
  CLUS_3                          4                          179
  CLUS_4                          3                           79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED        5      5      8
  AMP PEAK 23(12Q15) WILD-TYPE    217    179     95
D23V10, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                          5                          217
  CLUS_2                          5                          179
  CLUS_3                          8                           95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(12Q15) MUTATED       10      3      5
  AMP PEAK 23(12Q15) WILD-TYPE    175    158    154
D23V11, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                         10                          175
  CLUS_2                          3                          158
  CLUS_3                          5                          154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(12Q15) MUTATED        2      3      5      8
  AMP PEAK 23(12Q15) WILD-TYPE     89    134    183     81
D23V12, multiclass
        clus
vv       AMP PEAK 23(12Q15) MUTATED AMP PEAK 23(12Q15) WILD-TYPE
  CLUS_1                          2                           89
  CLUS_2                          3                          134
  CLUS_3                          5                          183
  CLUS_4                          8                           81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(13Q34) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED        8     10      7      5
  AMP PEAK 24(13Q34) WILD-TYPE    139     86    145    108
D24V1, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          8                          139
  CLUS_2                         10                           86
  CLUS_3                          7                          145
  CLUS_4                          5                          108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED        6      8      3     13
  AMP PEAK 24(13Q34) WILD-TYPE    142     94     97    145
D24V2, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          6                          142
  CLUS_2                          8                           94
  CLUS_3                          3                           97
  CLUS_4                         13                          145
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED        3     17      5      6
  AMP PEAK 24(13Q34) WILD-TYPE    153    166     82    114
D24V3, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          3                          153
  CLUS_2                         17                          166
  CLUS_3                          5                           82
  CLUS_4                          6                          114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED       20      6      5
  AMP PEAK 24(13Q34) WILD-TYPE    273    118    124
D24V4, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         20                          273
  CLUS_2                          6                          118
  CLUS_3                          5                          124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED       29     24      1
  AMP PEAK 24(13Q34) WILD-TYPE    504    518     14
D24V5, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         29                          504
  CLUS_2                         24                          518
  CLUS_3                          1                           14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED        6     19      1      1
  AMP PEAK 24(13Q34) WILD-TYPE    178    218     63    164
D24V6, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          6                          178
  CLUS_2                         19                          218
  CLUS_3                          1                           63
  CLUS_4                          1                          164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED       16     11      5
  AMP PEAK 24(13Q34) WILD-TYPE    217    224    187
D24V7, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         16                          217
  CLUS_2                         11                          224
  CLUS_3                          5                          187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED       13     13      6
  AMP PEAK 24(13Q34) WILD-TYPE    190    177    261
D24V8, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         13                          190
  CLUS_2                         13                          177
  CLUS_3                          6                          261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED       10      4      6      2
  AMP PEAK 24(13Q34) WILD-TYPE    127    103    177     80
D24V9, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         10                          127
  CLUS_2                          4                          103
  CLUS_3                          6                          177
  CLUS_4                          2                           80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED       11      6      5
  AMP PEAK 24(13Q34) WILD-TYPE    211    178     98
D24V10, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                         11                          211
  CLUS_2                          6                          178
  CLUS_3                          5                           98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(13Q34) MUTATED        9      7      6
  AMP PEAK 24(13Q34) WILD-TYPE    176    154    153
D24V11, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          9                          176
  CLUS_2                          7                          154
  CLUS_3                          6                          153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(13Q34) MUTATED        9      3      6      4
  AMP PEAK 24(13Q34) WILD-TYPE     82    134    182     85
D24V12, multiclass
        clus
vv       AMP PEAK 24(13Q34) MUTATED AMP PEAK 24(13Q34) WILD-TYPE
  CLUS_1                          9                           82
  CLUS_2                          3                          134
  CLUS_3                          6                          182
  CLUS_4                          4                           85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(14Q32.33) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED        6      6     15      5
  AMP PEAK 25(14Q32.33) WILD-TYPE    141     90    137    108
D25V1, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             6                             141
  CLUS_2                             6                              90
  CLUS_3                            15                             137
  CLUS_4                             5                             108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED        9      5      9      9
  AMP PEAK 25(14Q32.33) WILD-TYPE    139     97     91    149
D25V2, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             9                             139
  CLUS_2                             5                              97
  CLUS_3                             9                              91
  CLUS_4                             9                             149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED       12      9     10      4
  AMP PEAK 25(14Q32.33) WILD-TYPE    144    174     77    116
D25V3, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                            12                             144
  CLUS_2                             9                             174
  CLUS_3                            10                              77
  CLUS_4                             4                             116
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED       19      7      9
  AMP PEAK 25(14Q32.33) WILD-TYPE    274    117    120
D25V4, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                            19                             274
  CLUS_2                             7                             117
  CLUS_3                             9                             120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED       32     10      2
  AMP PEAK 25(14Q32.33) WILD-TYPE    501    532     13
D25V5, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                            32                             501
  CLUS_2                            10                             532
  CLUS_3                             2                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED        5      4      1      1
  AMP PEAK 25(14Q32.33) WILD-TYPE    179    233     63    164
D25V6, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             5                             179
  CLUS_2                             4                             233
  CLUS_3                             1                              63
  CLUS_4                             1                             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED       12      4      2
  AMP PEAK 25(14Q32.33) WILD-TYPE    221    231    190
D25V7, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                            12                             221
  CLUS_2                             4                             231
  CLUS_3                             2                             190
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED       11      5      2
  AMP PEAK 25(14Q32.33) WILD-TYPE    192    185    265
D25V8, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                            11                             192
  CLUS_2                             5                             185
  CLUS_3                             2                             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED        2      2      3      1
  AMP PEAK 25(14Q32.33) WILD-TYPE    135    105    180     81
D25V9, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             2                             135
  CLUS_2                             2                             105
  CLUS_3                             3                             180
  CLUS_4                             1                              81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED        3      2      3
  AMP PEAK 25(14Q32.33) WILD-TYPE    219    182    100
D25V10, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             3                             219
  CLUS_2                             2                             182
  CLUS_3                             3                             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(14Q32.33) MUTATED        2      3      3
  AMP PEAK 25(14Q32.33) WILD-TYPE    183    158    156
D25V11, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             2                             183
  CLUS_2                             3                             158
  CLUS_3                             3                             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(14Q32.33) MUTATED        0      3      3      2
  AMP PEAK 25(14Q32.33) WILD-TYPE     91    134    185     87
D25V12, multiclass
        clus
vv       AMP PEAK 25(14Q32.33) MUTATED AMP PEAK 25(14Q32.33) WILD-TYPE
  CLUS_1                             0                              91
  CLUS_2                             3                             134
  CLUS_3                             3                             185
  CLUS_4                             2                              87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(17P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED        9     12      6     20
  AMP PEAK 26(17P13.2) WILD-TYPE    138     84    146     93
D26V1, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            9                            138
  CLUS_2                           12                             84
  CLUS_3                            6                            146
  CLUS_4                           20                             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED       10     18      5     14
  AMP PEAK 26(17P13.2) WILD-TYPE    138     84     95    144
D26V2, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           10                            138
  CLUS_2                           18                             84
  CLUS_3                            5                             95
  CLUS_4                           14                            144
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED        6     21      8     13
  AMP PEAK 26(17P13.2) WILD-TYPE    150    162     79    107
D26V3, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            6                            150
  CLUS_2                           21                            162
  CLUS_3                            8                             79
  CLUS_4                           13                            107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED       32     10      6
  AMP PEAK 26(17P13.2) WILD-TYPE    261    114    123
D26V4, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           32                            261
  CLUS_2                           10                            114
  CLUS_3                            6                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED       45     28      1
  AMP PEAK 26(17P13.2) WILD-TYPE    488    514     14
D26V5, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           45                            488
  CLUS_2                           28                            514
  CLUS_3                            1                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED        6      8      1     13
  AMP PEAK 26(17P13.2) WILD-TYPE    178    229     63    152
D26V6, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            6                            178
  CLUS_2                            8                            229
  CLUS_3                            1                             63
  CLUS_4                           13                            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED       14     12      7
  AMP PEAK 26(17P13.2) WILD-TYPE    219    223    185
D26V7, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           14                            219
  CLUS_2                           12                            223
  CLUS_3                            7                            185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED       11      8     14
  AMP PEAK 26(17P13.2) WILD-TYPE    192    182    253
D26V8, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           11                            192
  CLUS_2                            8                            182
  CLUS_3                           14                            253
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED        4      7      6      6
  AMP PEAK 26(17P13.2) WILD-TYPE    133    100    177     76
D26V9, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            4                            133
  CLUS_2                            7                            100
  CLUS_3                            6                            177
  CLUS_4                            6                             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED       10     10      3
  AMP PEAK 26(17P13.2) WILD-TYPE    212    174    100
D26V10, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                           10                            212
  CLUS_2                           10                            174
  CLUS_3                            3                            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(17P13.2) MUTATED        4     13      6
  AMP PEAK 26(17P13.2) WILD-TYPE    181    148    153
D26V11, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            4                            181
  CLUS_2                           13                            148
  CLUS_3                            6                            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(17P13.2) MUTATED        3     11      7      2
  AMP PEAK 26(17P13.2) WILD-TYPE     88    126    181     87
D26V12, multiclass
        clus
vv       AMP PEAK 26(17P13.2) MUTATED AMP PEAK 26(17P13.2) WILD-TYPE
  CLUS_1                            3                             88
  CLUS_2                           11                            126
  CLUS_3                            7                            181
  CLUS_4                            2                             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(17Q25.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED       19     22     13     19
  AMP PEAK 27(17Q25.1) WILD-TYPE    128     74    139     94
D27V1, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           19                            128
  CLUS_2                           22                             74
  CLUS_3                           13                            139
  CLUS_4                           19                             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED       16     19     12     26
  AMP PEAK 27(17Q25.1) WILD-TYPE    132     83     88    132
D27V2, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           16                            132
  CLUS_2                           19                             83
  CLUS_3                           12                             88
  CLUS_4                           26                            132
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED       16     30     12     21
  AMP PEAK 27(17Q25.1) WILD-TYPE    140    153     75     99
D27V3, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           16                            140
  CLUS_2                           30                            153
  CLUS_3                           12                             75
  CLUS_4                           21                             99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       46     16     17
  AMP PEAK 27(17Q25.1) WILD-TYPE    247    108    112
D27V4, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           46                            247
  CLUS_2                           16                            108
  CLUS_3                           17                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       82     42      4
  AMP PEAK 27(17Q25.1) WILD-TYPE    451    500     11
D27V5, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           82                            451
  CLUS_2                           42                            500
  CLUS_3                            4                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED       22     22      3     11
  AMP PEAK 27(17Q25.1) WILD-TYPE    162    215     61    154
D27V6, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           22                            162
  CLUS_2                           22                            215
  CLUS_3                            3                             61
  CLUS_4                           11                            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       32     22     10
  AMP PEAK 27(17Q25.1) WILD-TYPE    201    213    182
D27V7, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           32                            201
  CLUS_2                           22                            213
  CLUS_3                           10                            182
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       27     20     17
  AMP PEAK 27(17Q25.1) WILD-TYPE    176    170    250
D27V8, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           27                            176
  CLUS_2                           20                            170
  CLUS_3                           17                            250
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED       13     14     10      7
  AMP PEAK 27(17Q25.1) WILD-TYPE    124     93    173     75
D27V9, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           13                            124
  CLUS_2                           14                             93
  CLUS_3                           10                            173
  CLUS_4                            7                             75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       20     13     11
  AMP PEAK 27(17Q25.1) WILD-TYPE    202    171     92
D27V10, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           20                            202
  CLUS_2                           13                            171
  CLUS_3                           11                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(17Q25.1) MUTATED       14     19     10
  AMP PEAK 27(17Q25.1) WILD-TYPE    171    142    149
D27V11, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                           14                            171
  CLUS_2                           19                            142
  CLUS_3                           10                            149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(17Q25.1) MUTATED        9     14     12      8
  AMP PEAK 27(17Q25.1) WILD-TYPE     82    123    176     81
D27V12, multiclass
        clus
vv       AMP PEAK 27(17Q25.1) MUTATED AMP PEAK 27(17Q25.1) WILD-TYPE
  CLUS_1                            9                             82
  CLUS_2                           14                            123
  CLUS_3                           12                            176
  CLUS_4                            8                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       58     34     96     29
  AMP PEAK 28(19P13.3) WILD-TYPE     89     62     56     84
D28V1, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           58                             89
  CLUS_2                           34                             62
  CLUS_3                           96                             56
  CLUS_4                           29                             84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       67     31     62     57
  AMP PEAK 28(19P13.3) WILD-TYPE     81     71     38    101
D28V2, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           67                             81
  CLUS_2                           31                             71
  CLUS_3                           62                             38
  CLUS_4                           57                            101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       67     88     25     52
  AMP PEAK 28(19P13.3) WILD-TYPE     89     95     62     68
D28V3, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           67                             89
  CLUS_2                           88                             95
  CLUS_3                           25                             62
  CLUS_4                           52                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED      108     53     71
  AMP PEAK 28(19P13.3) WILD-TYPE    185     71     58
D28V4, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                          108                            185
  CLUS_2                           53                             71
  CLUS_3                           71                             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED      252    117      6
  AMP PEAK 28(19P13.3) WILD-TYPE    281    425      9
D28V5, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                          252                            281
  CLUS_2                          117                            425
  CLUS_3                            6                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       76     21      6     80
  AMP PEAK 28(19P13.3) WILD-TYPE    108    216     58     85
D28V6, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           76                            108
  CLUS_2                           21                            216
  CLUS_3                            6                             58
  CLUS_4                           80                             85
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED       82     48     55
  AMP PEAK 28(19P13.3) WILD-TYPE    151    187    137
D28V7, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           82                            151
  CLUS_2                           48                            187
  CLUS_3                           55                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED       77     19     89
  AMP PEAK 28(19P13.3) WILD-TYPE    126    171    178
D28V8, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           77                            126
  CLUS_2                           19                            171
  CLUS_3                           89                            178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       24     23     45     37
  AMP PEAK 28(19P13.3) WILD-TYPE    113     84    138     45
D28V9, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           24                            113
  CLUS_2                           23                             84
  CLUS_3                           45                            138
  CLUS_4                           37                             45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED       47     52     30
  AMP PEAK 28(19P13.3) WILD-TYPE    175    132     73
D28V10, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           47                            175
  CLUS_2                           52                            132
  CLUS_3                           30                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(19P13.3) MUTATED       37     51     41
  AMP PEAK 28(19P13.3) WILD-TYPE    148    110    118
D28V11, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           37                            148
  CLUS_2                           51                            110
  CLUS_3                           41                            118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(19P13.3) MUTATED       10     46     47     26
  AMP PEAK 28(19P13.3) WILD-TYPE     81     91    141     63
D28V12, multiclass
        clus
vv       AMP PEAK 28(19P13.3) MUTATED AMP PEAK 28(19P13.3) WILD-TYPE
  CLUS_1                           10                             81
  CLUS_2                           46                             91
  CLUS_3                           47                            141
  CLUS_4                           26                             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(19P13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       57     38    101     25
  AMP PEAK 29(19P13.2) WILD-TYPE     90     58     51     88
D29V1, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           57                             90
  CLUS_2                           38                             58
  CLUS_3                          101                             51
  CLUS_4                           25                             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       66     32     66     57
  AMP PEAK 29(19P13.2) WILD-TYPE     82     70     34    101
D29V2, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           66                             82
  CLUS_2                           32                             70
  CLUS_3                           66                             34
  CLUS_4                           57                            101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       73     85     29     49
  AMP PEAK 29(19P13.2) WILD-TYPE     83     98     58     71
D29V3, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           73                             83
  CLUS_2                           85                             98
  CLUS_3                           29                             58
  CLUS_4                           49                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED      109     54     73
  AMP PEAK 29(19P13.2) WILD-TYPE    184     70     56
D29V4, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                          109                            184
  CLUS_2                           54                             70
  CLUS_3                           73                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED      261    104      6
  AMP PEAK 29(19P13.2) WILD-TYPE    272    438      9
D29V5, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                          261                            272
  CLUS_2                          104                            438
  CLUS_3                            6                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       79     13      6     77
  AMP PEAK 29(19P13.2) WILD-TYPE    105    224     58     88
D29V6, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           79                            105
  CLUS_2                           13                            224
  CLUS_3                            6                             58
  CLUS_4                           77                             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       88     43     48
  AMP PEAK 29(19P13.2) WILD-TYPE    145    192    144
D29V7, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           88                            145
  CLUS_2                           43                            192
  CLUS_3                           48                            144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       83     15     81
  AMP PEAK 29(19P13.2) WILD-TYPE    120    175    186
D29V8, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           83                            120
  CLUS_2                           15                            175
  CLUS_3                           81                            186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED       26     21     39     36
  AMP PEAK 29(19P13.2) WILD-TYPE    111     86    144     46
D29V9, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           26                            111
  CLUS_2                           21                             86
  CLUS_3                           39                            144
  CLUS_4                           36                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       45     46     31
  AMP PEAK 29(19P13.2) WILD-TYPE    177    138     72
D29V10, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           45                            177
  CLUS_2                           46                            138
  CLUS_3                           31                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(19P13.2) MUTATED       36     50     36
  AMP PEAK 29(19P13.2) WILD-TYPE    149    111    123
D29V11, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                           36                            149
  CLUS_2                           50                            111
  CLUS_3                           36                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(19P13.2) MUTATED        9     41     43     29
  AMP PEAK 29(19P13.2) WILD-TYPE     82     96    145     60
D29V12, multiclass
        clus
vv       AMP PEAK 29(19P13.2) MUTATED AMP PEAK 29(19P13.2) WILD-TYPE
  CLUS_1                            9                             82
  CLUS_2                           41                             96
  CLUS_3                           43                            145
  CLUS_4                           29                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       55     31     85     17
  AMP PEAK 30(19Q12) WILD-TYPE     92     65     67     96
D30V1, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         55                           92
  CLUS_2                         31                           65
  CLUS_3                         85                           67
  CLUS_4                         17                           96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       62     21     54     51
  AMP PEAK 30(19Q12) WILD-TYPE     86     81     46    107
D30V2, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         62                           86
  CLUS_2                         21                           81
  CLUS_3                         54                           46
  CLUS_4                         51                          107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       64     66     25     46
  AMP PEAK 30(19Q12) WILD-TYPE     92    117     62     74
D30V3, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         64                           92
  CLUS_2                         66                          117
  CLUS_3                         25                           62
  CLUS_4                         46                           74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       91     49     61
  AMP PEAK 30(19Q12) WILD-TYPE    202     75     68
D30V4, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         91                          202
  CLUS_2                         49                           75
  CLUS_3                         61                           68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED      221     20      6
  AMP PEAK 30(19Q12) WILD-TYPE    312    522      9
D30V5, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                        221                          312
  CLUS_2                         20                          522
  CLUS_3                          6                            9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       62      8      6      0
  AMP PEAK 30(19Q12) WILD-TYPE    122    229     58    165
D30V6, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         62                          122
  CLUS_2                          8                          229
  CLUS_3                          6                           58
  CLUS_4                          0                          165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       73      3      5
  AMP PEAK 30(19Q12) WILD-TYPE    160    232    187
D30V7, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         73                          160
  CLUS_2                          3                          232
  CLUS_3                          5                          187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       69      7      5
  AMP PEAK 30(19Q12) WILD-TYPE    134    183    262
D30V8, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         69                          134
  CLUS_2                          7                          183
  CLUS_3                          5                          262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED       10     15      6      0
  AMP PEAK 30(19Q12) WILD-TYPE    127     92    177     82
D30V9, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         10                          127
  CLUS_2                         15                           92
  CLUS_3                          6                          177
  CLUS_4                          0                           82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED        6      2     23
  AMP PEAK 30(19Q12) WILD-TYPE    216    182     80
D30V10, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                          6                          216
  CLUS_2                          2                          182
  CLUS_3                         23                           80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(19Q12) MUTATED       23      3      5
  AMP PEAK 30(19Q12) WILD-TYPE    162    158    154
D30V11, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                         23                          162
  CLUS_2                          3                          158
  CLUS_3                          5                          154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(19Q12) MUTATED        3      3      2     23
  AMP PEAK 30(19Q12) WILD-TYPE     88    134    186     66
D30V12, multiclass
        clus
vv       AMP PEAK 30(19Q12) MUTATED AMP PEAK 30(19Q12) WILD-TYPE
  CLUS_1                          3                           88
  CLUS_2                          3                          134
  CLUS_3                          2                          186
  CLUS_4                         23                           66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(19Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED       52     27     78     14
  AMP PEAK 31(19Q13.2) WILD-TYPE     95     69     74     99
D31V1, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           52                             95
  CLUS_2                           27                             69
  CLUS_3                           78                             74
  CLUS_4                           14                             99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED       62     18     49     42
  AMP PEAK 31(19Q13.2) WILD-TYPE     86     84     51    116
D31V2, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           62                             86
  CLUS_2                           18                             84
  CLUS_3                           49                             51
  CLUS_4                           42                            116
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED       58     61     22     45
  AMP PEAK 31(19Q13.2) WILD-TYPE     98    122     65     75
D31V3, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           58                             98
  CLUS_2                           61                            122
  CLUS_3                           22                             65
  CLUS_4                           45                             75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED       83     47     56
  AMP PEAK 31(19Q13.2) WILD-TYPE    210     77     73
D31V4, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           83                            210
  CLUS_2                           47                             77
  CLUS_3                           56                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED      207     17      7
  AMP PEAK 31(19Q13.2) WILD-TYPE    326    525      8
D31V5, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                          207                            326
  CLUS_2                           17                            525
  CLUS_3                            7                              8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED       63      5      7      0
  AMP PEAK 31(19Q13.2) WILD-TYPE    121    232     57    165
D31V6, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           63                            121
  CLUS_2                            5                            232
  CLUS_3                            7                             57
  CLUS_4                            0                            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED       67      3      5
  AMP PEAK 31(19Q13.2) WILD-TYPE    166    232    187
D31V7, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           67                            166
  CLUS_2                            3                            232
  CLUS_3                            5                            187
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED       63      7      5
  AMP PEAK 31(19Q13.2) WILD-TYPE    140    183    262
D31V8, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           63                            140
  CLUS_2                            7                            183
  CLUS_3                            5                            262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED       13     13      5      0
  AMP PEAK 31(19Q13.2) WILD-TYPE    124     94    178     82
D31V9, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           13                            124
  CLUS_2                           13                             94
  CLUS_3                            5                            178
  CLUS_4                            0                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED        7      1     23
  AMP PEAK 31(19Q13.2) WILD-TYPE    215    183     80
D31V10, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                            7                            215
  CLUS_2                            1                            183
  CLUS_3                           23                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(19Q13.2) MUTATED       25      2      4
  AMP PEAK 31(19Q13.2) WILD-TYPE    160    159    155
D31V11, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                           25                            160
  CLUS_2                            2                            159
  CLUS_3                            4                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(19Q13.2) MUTATED        5      1      1     24
  AMP PEAK 31(19Q13.2) WILD-TYPE     86    136    187     65
D31V12, multiclass
        clus
vv       AMP PEAK 31(19Q13.2) MUTATED AMP PEAK 31(19Q13.2) WILD-TYPE
  CLUS_1                            5                             86
  CLUS_2                            1                            136
  CLUS_3                            1                            187
  CLUS_4                           24                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = AMP PEAK 32(XP11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED        6     10      8      6
  AMP PEAK 32(XP11.21) WILD-TYPE    141     86    144    107
D32V1, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                            6                            141
  CLUS_2                           10                             86
  CLUS_3                            8                            144
  CLUS_4                            6                            107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED       10      7      6      7
  AMP PEAK 32(XP11.21) WILD-TYPE    138     95     94    151
D32V2, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           10                            138
  CLUS_2                            7                             95
  CLUS_3                            6                             94
  CLUS_4                            7                            151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED        8     13      7      5
  AMP PEAK 32(XP11.21) WILD-TYPE    148    170     80    115
D32V3, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                            8                            148
  CLUS_2                           13                            170
  CLUS_3                            7                             80
  CLUS_4                            5                            115
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED       18      8      7
  AMP PEAK 32(XP11.21) WILD-TYPE    275    116    122
D32V4, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           18                            275
  CLUS_2                            8                            116
  CLUS_3                            7                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED       29     74      1
  AMP PEAK 32(XP11.21) WILD-TYPE    504    468     14
D32V5, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           29                            504
  CLUS_2                           74                            468
  CLUS_3                            1                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED        7     63      5      1
  AMP PEAK 32(XP11.21) WILD-TYPE    177    174     59    164
D32V6, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                            7                            177
  CLUS_2                           63                            174
  CLUS_3                            5                             59
  CLUS_4                            1                            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED       18     41     18
  AMP PEAK 32(XP11.21) WILD-TYPE    215    194    174
D32V7, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           18                            215
  CLUS_2                           41                            194
  CLUS_3                           18                            174
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED        9     49     19
  AMP PEAK 32(XP11.21) WILD-TYPE    194    141    248
D32V8, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                            9                            194
  CLUS_2                           49                            141
  CLUS_3                           19                            248
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED       26     21     21      1
  AMP PEAK 32(XP11.21) WILD-TYPE    111     86    162     81
D32V9, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           26                            111
  CLUS_2                           21                             86
  CLUS_3                           21                            162
  CLUS_4                            1                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED       34     19     16
  AMP PEAK 32(XP11.21) WILD-TYPE    188    165     87
D32V10, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           34                            188
  CLUS_2                           19                            165
  CLUS_3                           16                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(XP11.21) MUTATED       32     20     17
  AMP PEAK 32(XP11.21) WILD-TYPE    153    141    142
D32V11, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           32                            153
  CLUS_2                           20                            141
  CLUS_3                           17                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(XP11.21) MUTATED       24     14     22      9
  AMP PEAK 32(XP11.21) WILD-TYPE     67    123    166     80
D32V12, multiclass
        clus
vv       AMP PEAK 32(XP11.21) MUTATED AMP PEAK 32(XP11.21) WILD-TYPE
  CLUS_1                           24                             67
  CLUS_2                           14                            123
  CLUS_3                           22                            166
  CLUS_4                            9                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = DEL PEAK  1(1P36.32) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       27     22     32     22
  DEL PEAK  1(1P36.32) WILD-TYPE    120     74    120     91
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           27                            120
  CLUS_2                           22                             74
  CLUS_3                           32                            120
  CLUS_4                           22                             91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       27     24     22     30
  DEL PEAK  1(1P36.32) WILD-TYPE    121     78     78    128
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           27                            121
  CLUS_2                           24                             78
  CLUS_3                           22                             78
  CLUS_4                           30                            128
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       27     39     20     24
  DEL PEAK  1(1P36.32) WILD-TYPE    129    144     67     96
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           27                            129
  CLUS_2                           39                            144
  CLUS_3                           20                             67
  CLUS_4                           24                             96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       61     19     30
  DEL PEAK  1(1P36.32) WILD-TYPE    232    105     99
D33V4, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           61                            232
  CLUS_2                           19                            105
  CLUS_3                           30                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED      114    204      0
  DEL PEAK  1(1P36.32) WILD-TYPE    419    338     15
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                          114                            419
  CLUS_2                          204                            338
  CLUS_3                            0                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       39     11     17    164
  DEL PEAK  1(1P36.32) WILD-TYPE    145    226     47      1
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           39                            145
  CLUS_2                           11                            226
  CLUS_3                           17                             47
  CLUS_4                          164                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       38     84    106
  DEL PEAK  1(1P36.32) WILD-TYPE    195    151     86
D33V7, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           38                            195
  CLUS_2                           84                            151
  CLUS_3                          106                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       34     16    178
  DEL PEAK  1(1P36.32) WILD-TYPE    169    174     89
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           34                            169
  CLUS_2                           16                            174
  CLUS_3                          178                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED       33     13     92     68
  DEL PEAK  1(1P36.32) WILD-TYPE    104     94     91     14
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           33                            104
  CLUS_2                           13                             94
  CLUS_3                           92                             91
  CLUS_4                           68                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       84    101     21
  DEL PEAK  1(1P36.32) WILD-TYPE    138     83     82
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           84                            138
  CLUS_2                          101                             83
  CLUS_3                           21                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.32) MUTATED       44     83     79
  DEL PEAK  1(1P36.32) WILD-TYPE    141     78     80
D33V11, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           44                            141
  CLUS_2                           83                             78
  CLUS_3                           79                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.32) MUTATED        7     83     95     21
  DEL PEAK  1(1P36.32) WILD-TYPE     84     54     93     68
D33V12, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                            7                             84
  CLUS_2                           83                             54
  CLUS_3                           95                             93
  CLUS_4                           21                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = DEL PEAK  2(1P36.23) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED       35     15     46     26
  DEL PEAK  2(1P36.23) WILD-TYPE    112     81    106     87
D34V1, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           35                            112
  CLUS_2                           15                             81
  CLUS_3                           46                            106
  CLUS_4                           26                             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED       35     17     29     41
  DEL PEAK  2(1P36.23) WILD-TYPE    113     85     71    117
D34V2, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           35                            113
  CLUS_2                           17                             85
  CLUS_3                           29                             71
  CLUS_4                           41                            117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED       38     38     22     33
  DEL PEAK  2(1P36.23) WILD-TYPE    118    145     65     87
D34V3, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           38                            118
  CLUS_2                           38                            145
  CLUS_3                           22                             65
  CLUS_4                           33                             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED       65     32     34
  DEL PEAK  2(1P36.23) WILD-TYPE    228     92     95
D34V4, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           65                            228
  CLUS_2                           32                             92
  CLUS_3                           34                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED      151    197      0
  DEL PEAK  2(1P36.23) WILD-TYPE    382    345     15
D34V5, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                          151                            382
  CLUS_2                          197                            345
  CLUS_3                            0                             15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED       52     12     18    164
  DEL PEAK  2(1P36.23) WILD-TYPE    132    225     46      1
D34V6, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           52                            132
  CLUS_2                           12                            225
  CLUS_3                           18                             46
  CLUS_4                          164                              1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED       55     85    108
  DEL PEAK  2(1P36.23) WILD-TYPE    178    150     84
D34V7, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           55                            178
  CLUS_2                           85                            150
  CLUS_3                          108                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED       50     17    181
  DEL PEAK  2(1P36.23) WILD-TYPE    153    173     86
D34V8, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           50                            153
  CLUS_2                           17                            173
  CLUS_3                          181                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED       35     15     94     68
  DEL PEAK  2(1P36.23) WILD-TYPE    102     92     89     14
D34V9, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           35                            102
  CLUS_2                           15                             92
  CLUS_3                           94                             89
  CLUS_4                           68                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED       85    103     24
  DEL PEAK  2(1P36.23) WILD-TYPE    137     81     79
D34V10, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           85                            137
  CLUS_2                          103                             81
  CLUS_3                           24                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P36.23) MUTATED       47     84     81
  DEL PEAK  2(1P36.23) WILD-TYPE    138     77     78
D34V11, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                           47                            138
  CLUS_2                           84                             77
  CLUS_3                           81                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P36.23) MUTATED        7     84     97     24
  DEL PEAK  2(1P36.23) WILD-TYPE     84     53     91     65
D34V12, multiclass
        clus
vv       DEL PEAK  2(1P36.23) MUTATED DEL PEAK  2(1P36.23) WILD-TYPE
  CLUS_1                            7                             84
  CLUS_2                           84                             53
  CLUS_3                           97                             91
  CLUS_4                           24                             65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = DEL PEAK  3(1P32.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED       22     13     13     10
  DEL PEAK  3(1P32.3) WILD-TYPE    125     83    139    103
D35V1, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          22                           125
  CLUS_2                          13                            83
  CLUS_3                          13                           139
  CLUS_4                          10                           103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED       17     15      7     19
  DEL PEAK  3(1P32.3) WILD-TYPE    131     87     93    139
D35V2, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          17                           131
  CLUS_2                          15                            87
  CLUS_3                           7                            93
  CLUS_4                          19                           139
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED       20     18     10     12
  DEL PEAK  3(1P32.3) WILD-TYPE    136    165     77    108
D35V3, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          20                           136
  CLUS_2                          18                           165
  CLUS_3                          10                            77
  CLUS_4                          12                           108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       35      8     17
  DEL PEAK  3(1P32.3) WILD-TYPE    258    116    112
D35V4, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          35                           258
  CLUS_2                           8                           116
  CLUS_3                          17                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       66    190      1
  DEL PEAK  3(1P32.3) WILD-TYPE    467    352     14
D35V5, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          66                           467
  CLUS_2                         190                           352
  CLUS_3                           1                            14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED       23      5     16    164
  DEL PEAK  3(1P32.3) WILD-TYPE    161    232     48      1
D35V6, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          23                           161
  CLUS_2                           5                           232
  CLUS_3                          16                            48
  CLUS_4                         164                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       36     82    101
  DEL PEAK  3(1P32.3) WILD-TYPE    197    153     91
D35V7, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          36                           197
  CLUS_2                          82                           153
  CLUS_3                         101                            91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       33     13    173
  DEL PEAK  3(1P32.3) WILD-TYPE    170    177     94
D35V8, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          33                           170
  CLUS_2                          13                           177
  CLUS_3                         173                            94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED       33     10     86     67
  DEL PEAK  3(1P32.3) WILD-TYPE    104     97     97     15
D35V9, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          33                           104
  CLUS_2                          10                            97
  CLUS_3                          86                            97
  CLUS_4                          67                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       82     96     18
  DEL PEAK  3(1P32.3) WILD-TYPE    140     88     85
D35V10, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          82                           140
  CLUS_2                          96                            88
  CLUS_3                          18                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1P32.3) MUTATED       39     82     75
  DEL PEAK  3(1P32.3) WILD-TYPE    146     79     84
D35V11, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                          39                           146
  CLUS_2                          82                            79
  CLUS_3                          75                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1P32.3) MUTATED        7     82     90     17
  DEL PEAK  3(1P32.3) WILD-TYPE     84     55     98     72
D35V12, multiclass
        clus
vv       DEL PEAK  3(1P32.3) MUTATED DEL PEAK  3(1P32.3) WILD-TYPE
  CLUS_1                           7                            84
  CLUS_2                          82                            55
  CLUS_3                          90                            98
  CLUS_4                          17                            72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = DEL PEAK  4(1P22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED       12      9     12      9
  DEL PEAK  4(1P22.1) WILD-TYPE    135     87    140    104
D36V1, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          12                           135
  CLUS_2                           9                            87
  CLUS_3                          12                           140
  CLUS_4                           9                           104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED       15      7     10     10
  DEL PEAK  4(1P22.1) WILD-TYPE    133     95     90    148
D36V2, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          15                           133
  CLUS_2                           7                            95
  CLUS_3                          10                            90
  CLUS_4                          10                           148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED       12     18      7      8
  DEL PEAK  4(1P22.1) WILD-TYPE    144    165     80    112
D36V3, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          12                           144
  CLUS_2                          18                           165
  CLUS_3                           7                            80
  CLUS_4                           8                           112
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       25      3     17
  DEL PEAK  4(1P22.1) WILD-TYPE    268    121    112
D36V4, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          25                           268
  CLUS_2                           3                           121
  CLUS_3                          17                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       46    188      0
  DEL PEAK  4(1P22.1) WILD-TYPE    487    354     15
D36V5, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          46                           487
  CLUS_2                         188                           354
  CLUS_3                           0                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED       12      6     14    164
  DEL PEAK  4(1P22.1) WILD-TYPE    172    231     50      1
D36V6, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          12                           172
  CLUS_2                           6                           231
  CLUS_3                          14                            50
  CLUS_4                         164                             1
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       15     81    100
  DEL PEAK  4(1P22.1) WILD-TYPE    218    154     92
D36V7, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          15                           218
  CLUS_2                          81                           154
  CLUS_3                         100                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       11     11    174
  DEL PEAK  4(1P22.1) WILD-TYPE    192    179     93
D36V8, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          11                           192
  CLUS_2                          11                           179
  CLUS_3                         174                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED       25      9     85     67
  DEL PEAK  4(1P22.1) WILD-TYPE    112     98     98     15
D36V9, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          25                           112
  CLUS_2                           9                            98
  CLUS_3                          85                            98
  CLUS_4                          67                            15
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       81     98      7
  DEL PEAK  4(1P22.1) WILD-TYPE    141     86     96
D36V10, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          81                           141
  CLUS_2                          98                            86
  CLUS_3                           7                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1P22.1) MUTATED       30     83     73
  DEL PEAK  4(1P22.1) WILD-TYPE    155     78     86
D36V11, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                          30                           155
  CLUS_2                          83                            78
  CLUS_3                          73                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1P22.1) MUTATED        7     82     90      7
  DEL PEAK  4(1P22.1) WILD-TYPE     84     55     98     82
D36V12, multiclass
        clus
vv       DEL PEAK  4(1P22.1) MUTATED DEL PEAK  4(1P22.1) WILD-TYPE
  CLUS_1                           7                            84
  CLUS_2                          82                            55
  CLUS_3                          90                            98
  CLUS_4                           7                            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = DEL PEAK  5(1Q42.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED       17      4     11     10
  DEL PEAK  5(1Q42.11) WILD-TYPE    130     92    141    103
D37V1, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           17                            130
  CLUS_2                            4                             92
  CLUS_3                           11                            141
  CLUS_4                           10                            103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED       15      8      7     12
  DEL PEAK  5(1Q42.11) WILD-TYPE    133     94     93    146
D37V2, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           15                            133
  CLUS_2                            8                             94
  CLUS_3                            7                             93
  CLUS_4                           12                            146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED       16     12      7     13
  DEL PEAK  5(1Q42.11) WILD-TYPE    140    171     80    107
D37V3, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           16                            140
  CLUS_2                           12                            171
  CLUS_3                            7                             80
  CLUS_4                           13                            107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       21     12     15
  DEL PEAK  5(1Q42.11) WILD-TYPE    272    112    114
D37V4, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           21                            272
  CLUS_2                           12                            112
  CLUS_3                           15                            114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       52     27      1
  DEL PEAK  5(1Q42.11) WILD-TYPE    481    515     14
D37V5, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           52                            481
  CLUS_2                           27                            515
  CLUS_3                            1                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED       18     18      8      1
  DEL PEAK  5(1Q42.11) WILD-TYPE    166    219     56    164
D37V6, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           18                            166
  CLUS_2                           18                            219
  CLUS_3                            8                             56
  CLUS_4                            1                            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       20     13      8
  DEL PEAK  5(1Q42.11) WILD-TYPE    213    222    184
D37V7, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           20                            213
  CLUS_2                           13                            222
  CLUS_3                            8                            184
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       15     17      9
  DEL PEAK  5(1Q42.11) WILD-TYPE    188    173    258
D37V8, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           15                            188
  CLUS_2                           17                            173
  CLUS_3                            9                            258
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED        6     13      9      1
  DEL PEAK  5(1Q42.11) WILD-TYPE    131     94    174     81
D37V9, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                            6                            131
  CLUS_2                           13                             94
  CLUS_3                            9                            174
  CLUS_4                            1                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       12      7     10
  DEL PEAK  5(1Q42.11) WILD-TYPE    210    177     93
D37V10, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           12                            210
  CLUS_2                            7                            177
  CLUS_3                           10                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(1Q42.11) MUTATED       11     11      7
  DEL PEAK  5(1Q42.11) WILD-TYPE    174    150    152
D37V11, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                           11                            174
  CLUS_2                           11                            150
  CLUS_3                            7                            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(1Q42.11) MUTATED        7      7      5     10
  DEL PEAK  5(1Q42.11) WILD-TYPE     84    130    183     79
D37V12, multiclass
        clus
vv       DEL PEAK  5(1Q42.11) MUTATED DEL PEAK  5(1Q42.11) WILD-TYPE
  CLUS_1                            7                             84
  CLUS_2                            7                            130
  CLUS_3                            5                            183
  CLUS_4                           10                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = DEL PEAK  6(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED        6      9      7      7
  DEL PEAK  6(1Q44) WILD-TYPE    141     87    145    106
D38V1, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                         6                         141
  CLUS_2                         9                          87
  CLUS_3                         7                         145
  CLUS_4                         7                         106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED        8     10      5      6
  DEL PEAK  6(1Q44) WILD-TYPE    140     92     95    152
D38V2, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                         8                         140
  CLUS_2                        10                          92
  CLUS_3                         5                          95
  CLUS_4                         6                         152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED       10     11      7      6
  DEL PEAK  6(1Q44) WILD-TYPE    146    172     80    114
D38V3, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        10                         146
  CLUS_2                        11                         172
  CLUS_3                         7                          80
  CLUS_4                         6                         114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       18      8      8
  DEL PEAK  6(1Q44) WILD-TYPE    275    116    121
D38V4, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        18                         275
  CLUS_2                         8                         116
  CLUS_3                         8                         121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       29     40      2
  DEL PEAK  6(1Q44) WILD-TYPE    504    502     13
D38V5, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        29                         504
  CLUS_2                        40                         502
  CLUS_3                         2                          13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED       11     28      7      2
  DEL PEAK  6(1Q44) WILD-TYPE    173    209     57    163
D38V6, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        11                         173
  CLUS_2                        28                         209
  CLUS_3                         7                          57
  CLUS_4                         2                         163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       16     22      8
  DEL PEAK  6(1Q44) WILD-TYPE    217    213    184
D38V7, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        16                         217
  CLUS_2                        22                         213
  CLUS_3                         8                         184
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       12     23     11
  DEL PEAK  6(1Q44) WILD-TYPE    191    167    256
D38V8, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        12                         191
  CLUS_2                        23                         167
  CLUS_3                        11                         256
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED        9     14      9      3
  DEL PEAK  6(1Q44) WILD-TYPE    128     93    174     79
D38V9, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                         9                         128
  CLUS_2                        14                          93
  CLUS_3                         9                         174
  CLUS_4                         3                          79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       18     10      7
  DEL PEAK  6(1Q44) WILD-TYPE    204    174     96
D38V10, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        18                         204
  CLUS_2                        10                         174
  CLUS_3                         7                          96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(1Q44) MUTATED       12     14      8
  DEL PEAK  6(1Q44) WILD-TYPE    173    147    151
D38V11, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        12                         173
  CLUS_2                        14                         147
  CLUS_3                         8                         151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(1Q44) MUTATED       11      8      9      6
  DEL PEAK  6(1Q44) WILD-TYPE     80    129    179     83
D38V12, multiclass
        clus
vv       DEL PEAK  6(1Q44) MUTATED DEL PEAK  6(1Q44) WILD-TYPE
  CLUS_1                        11                          80
  CLUS_2                         8                         129
  CLUS_3                         9                         179
  CLUS_4                         6                          83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  7(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED        9     17      8      7
  DEL PEAK  7(2Q22.1) WILD-TYPE    138     79    144    106
D39V1, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           9                           138
  CLUS_2                          17                            79
  CLUS_3                           8                           144
  CLUS_4                           7                           106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED        9     16      5     11
  DEL PEAK  7(2Q22.1) WILD-TYPE    139     86     95    147
D39V2, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           9                           139
  CLUS_2                          16                            86
  CLUS_3                           5                            95
  CLUS_4                          11                           147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED       10     18      8      6
  DEL PEAK  7(2Q22.1) WILD-TYPE    146    165     79    114
D39V3, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          10                           146
  CLUS_2                          18                           165
  CLUS_3                           8                            79
  CLUS_4                           6                           114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED       23      7     12
  DEL PEAK  7(2Q22.1) WILD-TYPE    270    117    117
D39V4, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          23                           270
  CLUS_2                           7                           117
  CLUS_3                          12                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED       41     25      2
  DEL PEAK  7(2Q22.1) WILD-TYPE    492    517     13
D39V5, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          41                           492
  CLUS_2                          25                           517
  CLUS_3                           2                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED       15     15      3      3
  DEL PEAK  7(2Q22.1) WILD-TYPE    169    222     61    162
D39V6, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          15                           169
  CLUS_2                          15                           222
  CLUS_3                           3                            61
  CLUS_4                           3                           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED       17      8      7
  DEL PEAK  7(2Q22.1) WILD-TYPE    216    227    185
D39V7, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          17                           216
  CLUS_2                           8                           227
  CLUS_3                           7                           185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED       13     12      7
  DEL PEAK  7(2Q22.1) WILD-TYPE    190    178    260
D39V8, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                          13                           190
  CLUS_2                          12                           178
  CLUS_3                           7                           260
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED        4      9      5      2
  DEL PEAK  7(2Q22.1) WILD-TYPE    133     98    178     80
D39V9, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           4                           133
  CLUS_2                           9                            98
  CLUS_3                           5                           178
  CLUS_4                           2                            80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED        8      7      5
  DEL PEAK  7(2Q22.1) WILD-TYPE    214    177     98
D39V10, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           8                           214
  CLUS_2                           7                           177
  CLUS_3                           5                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q22.1) MUTATED        8      5      6
  DEL PEAK  7(2Q22.1) WILD-TYPE    177    156    153
D39V11, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           8                           177
  CLUS_2                           5                           156
  CLUS_3                           6                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q22.1) MUTATED        1      7      6      5
  DEL PEAK  7(2Q22.1) WILD-TYPE     90    130    182     84
D39V12, multiclass
        clus
vv       DEL PEAK  7(2Q22.1) MUTATED DEL PEAK  7(2Q22.1) WILD-TYPE
  CLUS_1                           1                            90
  CLUS_2                           7                           130
  CLUS_3                           6                           182
  CLUS_4                           5                            84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  8(2Q37.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       12     16     11     10
  DEL PEAK  8(2Q37.1) WILD-TYPE    135     80    141    103
D40V1, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          12                           135
  CLUS_2                          16                            80
  CLUS_3                          11                           141
  CLUS_4                          10                           103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       10     20      7     12
  DEL PEAK  8(2Q37.1) WILD-TYPE    138     82     93    146
D40V2, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          10                           138
  CLUS_2                          20                            82
  CLUS_3                           7                            93
  CLUS_4                          12                           146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       10     22     10     11
  DEL PEAK  8(2Q37.1) WILD-TYPE    146    161     77    109
D40V3, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          10                           146
  CLUS_2                          22                           161
  CLUS_3                          10                            77
  CLUS_4                          11                           109
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       30     10     13
  DEL PEAK  8(2Q37.1) WILD-TYPE    263    114    116
D40V4, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          30                           263
  CLUS_2                          10                           114
  CLUS_3                          13                           116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       45     72      4
  DEL PEAK  8(2Q37.1) WILD-TYPE    488    470     11
D40V5, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          45                           488
  CLUS_2                          72                           470
  CLUS_3                           4                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       17     56      4      4
  DEL PEAK  8(2Q37.1) WILD-TYPE    167    181     60    161
D40V6, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          17                           167
  CLUS_2                          56                           181
  CLUS_3                           4                            60
  CLUS_4                           4                           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       26     37     14
  DEL PEAK  8(2Q37.1) WILD-TYPE    207    198    178
D40V7, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          26                           207
  CLUS_2                          37                           198
  CLUS_3                          14                           178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       15     46     16
  DEL PEAK  8(2Q37.1) WILD-TYPE    188    144    251
D40V8, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          15                           188
  CLUS_2                          46                           144
  CLUS_3                          16                           251
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       25     21     13      6
  DEL PEAK  8(2Q37.1) WILD-TYPE    112     86    170     76
D40V9, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          25                           112
  CLUS_2                          21                            86
  CLUS_3                          13                           170
  CLUS_4                           6                            76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       33     14     18
  DEL PEAK  8(2Q37.1) WILD-TYPE    189    170     85
D40V10, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          33                           189
  CLUS_2                          14                           170
  CLUS_3                          18                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.1) MUTATED       37     14     13
  DEL PEAK  8(2Q37.1) WILD-TYPE    148    147    146
D40V11, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          37                           148
  CLUS_2                          14                           147
  CLUS_3                          13                           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.1) MUTATED       18     15     19     12
  DEL PEAK  8(2Q37.1) WILD-TYPE     73    122    169     77
D40V12, multiclass
        clus
vv       DEL PEAK  8(2Q37.1) MUTATED DEL PEAK  8(2Q37.1) WILD-TYPE
  CLUS_1                          18                            73
  CLUS_2                          15                           122
  CLUS_3                          19                           169
  CLUS_4                          12                            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK  9(3P21.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED        9     13     18     13
  DEL PEAK  9(3P21.31) WILD-TYPE    138     83    134    100
D41V1, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                            9                            138
  CLUS_2                           13                             83
  CLUS_3                           18                            134
  CLUS_4                           13                            100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED       11     16      8     18
  DEL PEAK  9(3P21.31) WILD-TYPE    137     86     92    140
D41V2, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           11                            137
  CLUS_2                           16                             86
  CLUS_3                            8                             92
  CLUS_4                           18                            140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED       16     22      5     12
  DEL PEAK  9(3P21.31) WILD-TYPE    140    161     82    108
D41V3, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           16                            140
  CLUS_2                           22                            161
  CLUS_3                            5                             82
  CLUS_4                           12                            108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       30     16      9
  DEL PEAK  9(3P21.31) WILD-TYPE    263    108    120
D41V4, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           30                            263
  CLUS_2                           16                            108
  CLUS_3                            9                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       43     63      2
  DEL PEAK  9(3P21.31) WILD-TYPE    490    479     13
D41V5, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           43                            490
  CLUS_2                           63                            479
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED       15     36      6      6
  DEL PEAK  9(3P21.31) WILD-TYPE    169    201     58    159
D41V6, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           15                            169
  CLUS_2                           36                            201
  CLUS_3                            6                             58
  CLUS_4                            6                            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       29     25     12
  DEL PEAK  9(3P21.31) WILD-TYPE    204    210    180
D41V7, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           29                            204
  CLUS_2                           25                            210
  CLUS_3                           12                            180
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       23     26     17
  DEL PEAK  9(3P21.31) WILD-TYPE    180    164    250
D41V8, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           23                            180
  CLUS_2                           26                            164
  CLUS_3                           17                            250
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED       13     21      9      8
  DEL PEAK  9(3P21.31) WILD-TYPE    124     86    174     74
D41V9, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           13                            124
  CLUS_2                           21                             86
  CLUS_3                            9                            174
  CLUS_4                            8                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       24      9     18
  DEL PEAK  9(3P21.31) WILD-TYPE    198    175     85
D41V10, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           24                            198
  CLUS_2                            9                            175
  CLUS_3                           18                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P21.31) MUTATED       21     15     14
  DEL PEAK  9(3P21.31) WILD-TYPE    164    146    145
D41V11, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           21                            164
  CLUS_2                           15                            146
  CLUS_3                           14                            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P21.31) MUTATED       13     14     11     12
  DEL PEAK  9(3P21.31) WILD-TYPE     78    123    177     77
D41V12, multiclass
        clus
vv       DEL PEAK  9(3P21.31) MUTATED DEL PEAK  9(3P21.31) WILD-TYPE
  CLUS_1                           13                             78
  CLUS_2                           14                            123
  CLUS_3                           11                            177
  CLUS_4                           12                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK 10(3Q13.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED       12      9     14     15
  DEL PEAK 10(3Q13.31) WILD-TYPE    135     87    138     98
D42V1, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           12                            135
  CLUS_2                            9                             87
  CLUS_3                           14                            138
  CLUS_4                           15                             98
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED       12     10      7     21
  DEL PEAK 10(3Q13.31) WILD-TYPE    136     92     93    137
D42V2, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           12                            136
  CLUS_2                           10                             92
  CLUS_3                            7                             93
  CLUS_4                           21                            137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED       12     19      8     15
  DEL PEAK 10(3Q13.31) WILD-TYPE    144    164     79    105
D42V3, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           12                            144
  CLUS_2                           19                            164
  CLUS_3                            8                             79
  CLUS_4                           15                            105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       29     15     10
  DEL PEAK 10(3Q13.31) WILD-TYPE    264    109    119
D42V4, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           29                            264
  CLUS_2                           15                            109
  CLUS_3                           10                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       44     50      1
  DEL PEAK 10(3Q13.31) WILD-TYPE    489    492     14
D42V5, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           44                            489
  CLUS_2                           50                            492
  CLUS_3                            1                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED       12     28      6      4
  DEL PEAK 10(3Q13.31) WILD-TYPE    172    209     58    161
D42V6, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           12                            172
  CLUS_2                           28                            209
  CLUS_3                            6                             58
  CLUS_4                            4                            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       19     20     10
  DEL PEAK 10(3Q13.31) WILD-TYPE    214    215    182
D42V7, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           19                            214
  CLUS_2                           20                            215
  CLUS_3                           10                            182
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       15     21     13
  DEL PEAK 10(3Q13.31) WILD-TYPE    188    169    254
D42V8, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           15                            188
  CLUS_2                           21                            169
  CLUS_3                           13                            254
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED        9     14     12      4
  DEL PEAK 10(3Q13.31) WILD-TYPE    128     93    171     78
D42V9, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                            9                            128
  CLUS_2                           14                             93
  CLUS_3                           12                            171
  CLUS_4                            4                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       16      6     17
  DEL PEAK 10(3Q13.31) WILD-TYPE    206    178     86
D42V10, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           16                            206
  CLUS_2                            6                            178
  CLUS_3                           17                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3Q13.31) MUTATED       17     10     11
  DEL PEAK 10(3Q13.31) WILD-TYPE    168    151    148
D42V11, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           17                            168
  CLUS_2                           10                            151
  CLUS_3                           11                            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3Q13.31) MUTATED       10     11      8      9
  DEL PEAK 10(3Q13.31) WILD-TYPE     81    126    180     80
D42V12, multiclass
        clus
vv       DEL PEAK 10(3Q13.31) MUTATED DEL PEAK 10(3Q13.31) WILD-TYPE
  CLUS_1                           10                             81
  CLUS_2                           11                            126
  CLUS_3                            8                            180
  CLUS_4                            9                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK 11(3Q29) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED        9     11     20     14
  DEL PEAK 11(3Q29) WILD-TYPE    138     85    132     99
D43V1, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                         9                         138
  CLUS_2                        11                          85
  CLUS_3                        20                         132
  CLUS_4                        14                          99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED        9     13     12     20
  DEL PEAK 11(3Q29) WILD-TYPE    139     89     88    138
D43V2, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                         9                         139
  CLUS_2                        13                          89
  CLUS_3                        12                          88
  CLUS_4                        20                         138
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED       13     22      9     16
  DEL PEAK 11(3Q29) WILD-TYPE    143    161     78    104
D43V3, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        13                         143
  CLUS_2                        22                         161
  CLUS_3                         9                          78
  CLUS_4                        16                         104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       32     15     13
  DEL PEAK 11(3Q29) WILD-TYPE    261    109    116
D43V4, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        32                         261
  CLUS_2                        15                         109
  CLUS_3                        13                         116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       53     53      1
  DEL PEAK 11(3Q29) WILD-TYPE    480    489     14
D43V5, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        53                         480
  CLUS_2                        53                         489
  CLUS_3                         1                          14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED       17     32      6      5
  DEL PEAK 11(3Q29) WILD-TYPE    167    205     58    160
D43V6, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        17                         167
  CLUS_2                        32                         205
  CLUS_3                         6                          58
  CLUS_4                         5                         160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       32     21     13
  DEL PEAK 11(3Q29) WILD-TYPE    201    214    179
D43V7, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        32                         201
  CLUS_2                        21                         214
  CLUS_3                        13                         179
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       25     26     15
  DEL PEAK 11(3Q29) WILD-TYPE    178    164    252
D43V8, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        25                         178
  CLUS_2                        26                         164
  CLUS_3                        15                         252
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED       12     15     14      5
  DEL PEAK 11(3Q29) WILD-TYPE    125     92    169     77
D43V9, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        12                         125
  CLUS_2                        15                          92
  CLUS_3                        14                         169
  CLUS_4                         5                          77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       18     12     16
  DEL PEAK 11(3Q29) WILD-TYPE    204    172     87
D43V10, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        18                         204
  CLUS_2                        12                         172
  CLUS_3                        16                          87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q29) MUTATED       18     14     13
  DEL PEAK 11(3Q29) WILD-TYPE    167    147    146
D43V11, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        18                         167
  CLUS_2                        14                         147
  CLUS_3                        13                         146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q29) MUTATED       11     11     13     10
  DEL PEAK 11(3Q29) WILD-TYPE     80    126    175     79
D43V12, multiclass
        clus
vv       DEL PEAK 11(3Q29) MUTATED DEL PEAK 11(3Q29) WILD-TYPE
  CLUS_1                        11                          80
  CLUS_2                        11                         126
  CLUS_3                        13                         175
  CLUS_4                        10                          79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK 12(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       16     25     18     22
  DEL PEAK 12(4Q34.3) WILD-TYPE    131     71    134     91
D44V1, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          16                           131
  CLUS_2                          25                            71
  CLUS_3                          18                           134
  CLUS_4                          22                            91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       17     31     10     23
  DEL PEAK 12(4Q34.3) WILD-TYPE    131     71     90    135
D44V2, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          17                           131
  CLUS_2                          31                            71
  CLUS_3                          10                            90
  CLUS_4                          23                           135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       17     39     13     18
  DEL PEAK 12(4Q34.3) WILD-TYPE    139    144     74    102
D44V3, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          17                           139
  CLUS_2                          39                           144
  CLUS_3                          13                            74
  CLUS_4                          18                           102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       55     13     19
  DEL PEAK 12(4Q34.3) WILD-TYPE    238    111    110
D44V4, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          55                           238
  CLUS_2                          13                           111
  CLUS_3                          19                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       77    151      3
  DEL PEAK 12(4Q34.3) WILD-TYPE    456    391     12
D44V5, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          77                           456
  CLUS_2                         151                           391
  CLUS_3                           3                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       25     80      6     51
  DEL PEAK 12(4Q34.3) WILD-TYPE    159    157     58    114
D44V6, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          25                           159
  CLUS_2                          80                           157
  CLUS_3                           6                            58
  CLUS_4                          51                           114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       41     73     54
  DEL PEAK 12(4Q34.3) WILD-TYPE    192    162    138
D44V7, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          41                           192
  CLUS_2                          73                           162
  CLUS_3                          54                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       31     56     81
  DEL PEAK 12(4Q34.3) WILD-TYPE    172    134    186
D44V8, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          31                           172
  CLUS_2                          56                           134
  CLUS_3                          81                           186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       25     31     52     29
  DEL PEAK 12(4Q34.3) WILD-TYPE    112     76    131     53
D44V9, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          25                           112
  CLUS_2                          31                            76
  CLUS_3                          52                           131
  CLUS_4                          29                            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       62     57     18
  DEL PEAK 12(4Q34.3) WILD-TYPE    160    127     85
D44V10, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          62                           160
  CLUS_2                          57                           127
  CLUS_3                          18                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(4Q34.3) MUTATED       33     55     49
  DEL PEAK 12(4Q34.3) WILD-TYPE    152    106    110
D44V11, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          33                           152
  CLUS_2                          55                           106
  CLUS_3                          49                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(4Q34.3) MUTATED       24     46     55     12
  DEL PEAK 12(4Q34.3) WILD-TYPE     67     91    133     77
D44V12, multiclass
        clus
vv       DEL PEAK 12(4Q34.3) MUTATED DEL PEAK 12(4Q34.3) WILD-TYPE
  CLUS_1                          24                            67
  CLUS_2                          46                            91
  CLUS_3                          55                           133
  CLUS_4                          12                            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK 13(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED        5     22     10     14
  DEL PEAK 13(5P15.33) WILD-TYPE    142     74    142     99
D45V1, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                            5                            142
  CLUS_2                           22                             74
  CLUS_3                           10                            142
  CLUS_4                           14                             99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED        7     24      8     12
  DEL PEAK 13(5P15.33) WILD-TYPE    141     78     92    146
D45V2, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                            7                            141
  CLUS_2                           24                             78
  CLUS_3                            8                             92
  CLUS_4                           12                            146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED        6     28     10      7
  DEL PEAK 13(5P15.33) WILD-TYPE    150    155     77    113
D45V3, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                            6                            150
  CLUS_2                           28                            155
  CLUS_3                           10                             77
  CLUS_4                            7                            113
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       33      5     13
  DEL PEAK 13(5P15.33) WILD-TYPE    260    119    116
D45V4, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           33                            260
  CLUS_2                            5                            119
  CLUS_3                           13                            116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       40     63      4
  DEL PEAK 13(5P15.33) WILD-TYPE    493    479     11
D45V5, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           40                            493
  CLUS_2                           63                            479
  CLUS_3                            4                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED       16     41      3      3
  DEL PEAK 13(5P15.33) WILD-TYPE    168    196     61    162
D45V6, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           16                            168
  CLUS_2                           41                            196
  CLUS_3                            3                             61
  CLUS_4                            3                            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       32     21     15
  DEL PEAK 13(5P15.33) WILD-TYPE    201    214    177
D45V7, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           32                            201
  CLUS_2                           21                            214
  CLUS_3                           15                            177
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       20     31     17
  DEL PEAK 13(5P15.33) WILD-TYPE    183    159    250
D45V8, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           20                            183
  CLUS_2                           31                            159
  CLUS_3                           17                            250
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED       11     20     17      2
  DEL PEAK 13(5P15.33) WILD-TYPE    126     87    166     80
D45V9, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           11                            126
  CLUS_2                           20                             87
  CLUS_3                           17                            166
  CLUS_4                            2                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       20     15     15
  DEL PEAK 13(5P15.33) WILD-TYPE    202    169     88
D45V10, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           20                            202
  CLUS_2                           15                            169
  CLUS_3                           15                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(5P15.33) MUTATED       18     17     15
  DEL PEAK 13(5P15.33) WILD-TYPE    167    144    144
D45V11, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                           18                            167
  CLUS_2                           17                            144
  CLUS_3                           15                            144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(5P15.33) MUTATED        9     12     16     13
  DEL PEAK 13(5P15.33) WILD-TYPE     82    125    172     76
D45V12, multiclass
        clus
vv       DEL PEAK 13(5P15.33) MUTATED DEL PEAK 13(5P15.33) WILD-TYPE
  CLUS_1                            9                             82
  CLUS_2                           12                            125
  CLUS_3                           16                            172
  CLUS_4                           13                             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK 14(5Q34) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED        8     26     12     17
  DEL PEAK 14(5Q34) WILD-TYPE    139     70    140     96
D46V1, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                         8                         139
  CLUS_2                        26                          70
  CLUS_3                        12                         140
  CLUS_4                        17                          96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED       10     31     11     11
  DEL PEAK 14(5Q34) WILD-TYPE    138     71     89    147
D46V2, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        10                         138
  CLUS_2                        31                          71
  CLUS_3                        11                          89
  CLUS_4                        11                         147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED        6     36      9     11
  DEL PEAK 14(5Q34) WILD-TYPE    150    147     78    109
D46V3, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                         6                         150
  CLUS_2                        36                         147
  CLUS_3                         9                          78
  CLUS_4                        11                         109
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       42      5     15
  DEL PEAK 14(5Q34) WILD-TYPE    251    119    114
D46V4, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        42                         251
  CLUS_2                         5                         119
  CLUS_3                        15                         114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       45     83      5
  DEL PEAK 14(5Q34) WILD-TYPE    488    459     10
D46V5, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        45                         488
  CLUS_2                        83                         459
  CLUS_3                         5                          10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED       19     55      4      2
  DEL PEAK 14(5Q34) WILD-TYPE    165    182     60    163
D46V6, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        19                         165
  CLUS_2                        55                         182
  CLUS_3                         4                          60
  CLUS_4                         2                         163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       41     28     19
  DEL PEAK 14(5Q34) WILD-TYPE    192    207    173
D46V7, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        41                         192
  CLUS_2                        28                         207
  CLUS_3                        19                         173
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       24     46     18
  DEL PEAK 14(5Q34) WILD-TYPE    179    144    249
D46V8, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        24                         179
  CLUS_2                        46                         144
  CLUS_3                        18                         249
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED       15     27     18      3
  DEL PEAK 14(5Q34) WILD-TYPE    122     80    165     79
D46V9, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        15                         122
  CLUS_2                        27                          80
  CLUS_3                        18                         165
  CLUS_4                         3                          79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       25     18     20
  DEL PEAK 14(5Q34) WILD-TYPE    197    166     83
D46V10, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        25                         197
  CLUS_2                        18                         166
  CLUS_3                        20                          83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(5Q34) MUTATED       27     18     18
  DEL PEAK 14(5Q34) WILD-TYPE    158    143    141
D46V11, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        27                         158
  CLUS_2                        18                         143
  CLUS_3                        18                         141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(5Q34) MUTATED       13     16     19     15
  DEL PEAK 14(5Q34) WILD-TYPE     78    121    169     74
D46V12, multiclass
        clus
vv       DEL PEAK 14(5Q34) MUTATED DEL PEAK 14(5Q34) WILD-TYPE
  CLUS_1                        13                          78
  CLUS_2                        16                         121
  CLUS_3                        19                         169
  CLUS_4                        15                          74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK 15(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       23     19     15     21
  DEL PEAK 15(6P25.3) WILD-TYPE    124     77    137     92
D47V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          23                           124
  CLUS_2                          19                            77
  CLUS_3                          15                           137
  CLUS_4                          21                            92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       20     23     10     25
  DEL PEAK 15(6P25.3) WILD-TYPE    128     79     90    133
D47V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          20                           128
  CLUS_2                          23                            79
  CLUS_3                          10                            90
  CLUS_4                          25                           133
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       22     35     10     17
  DEL PEAK 15(6P25.3) WILD-TYPE    134    148     77    103
D47V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          22                           134
  CLUS_2                          35                           148
  CLUS_3                          10                            77
  CLUS_4                          17                           103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       46     20     18
  DEL PEAK 15(6P25.3) WILD-TYPE    247    104    111
D47V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          46                           247
  CLUS_2                          20                           104
  CLUS_3                          18                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       82     54      2
  DEL PEAK 15(6P25.3) WILD-TYPE    451    488     13
D47V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          82                           451
  CLUS_2                          54                           488
  CLUS_3                           2                            13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       23     28     12      8
  DEL PEAK 15(6P25.3) WILD-TYPE    161    209     52    157
D47V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          23                           161
  CLUS_2                          28                           209
  CLUS_3                          12                            52
  CLUS_4                           8                           157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       42     23     14
  DEL PEAK 15(6P25.3) WILD-TYPE    191    212    178
D47V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          42                           191
  CLUS_2                          23                           212
  CLUS_3                          14                           178
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       37     23     19
  DEL PEAK 15(6P25.3) WILD-TYPE    166    167    248
D47V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          37                           166
  CLUS_2                          23                           167
  CLUS_3                          19                           248
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED       16     13     13      8
  DEL PEAK 15(6P25.3) WILD-TYPE    121     94    170     74
D47V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          16                           121
  CLUS_2                          13                            94
  CLUS_3                          13                           170
  CLUS_4                           8                            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       22     14     14
  DEL PEAK 15(6P25.3) WILD-TYPE    200    170     89
D47V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          22                           200
  CLUS_2                          14                           170
  CLUS_3                          14                            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(6P25.3) MUTATED       24     11     14
  DEL PEAK 15(6P25.3) WILD-TYPE    161    150    145
D47V11, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          24                           161
  CLUS_2                          11                           150
  CLUS_3                          14                           145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(6P25.3) MUTATED        9     12     13     15
  DEL PEAK 15(6P25.3) WILD-TYPE     82    125    175     74
D47V12, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           9                            82
  CLUS_2                          12                           125
  CLUS_3                          13                           175
  CLUS_4                          15                            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 16(6Q22.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       46     27     43     27
  DEL PEAK 16(6Q22.31) WILD-TYPE    101     69    109     86
D48V1, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           46                            101
  CLUS_2                           27                             69
  CLUS_3                           43                            109
  CLUS_4                           27                             86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       42     29     29     43
  DEL PEAK 16(6Q22.31) WILD-TYPE    106     73     71    115
D48V2, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           42                            106
  CLUS_2                           29                             73
  CLUS_3                           29                             71
  CLUS_4                           43                            115
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       45     57     20     27
  DEL PEAK 16(6Q22.31) WILD-TYPE    111    126     67     93
D48V3, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           45                            111
  CLUS_2                           57                            126
  CLUS_3                           20                             67
  CLUS_4                           27                             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       77     30     42
  DEL PEAK 16(6Q22.31) WILD-TYPE    216     94     87
D48V4, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           77                            216
  CLUS_2                           30                             94
  CLUS_3                           42                             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED      155     79      2
  DEL PEAK 16(6Q22.31) WILD-TYPE    378    463     13
D48V5, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                          155                            378
  CLUS_2                           79                            463
  CLUS_3                            2                             13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       44     49     15      8
  DEL PEAK 16(6Q22.31) WILD-TYPE    140    188     49    157
D48V6, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           44                            140
  CLUS_2                           49                            188
  CLUS_3                           15                             49
  CLUS_4                            8                            157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       72     39     20
  DEL PEAK 16(6Q22.31) WILD-TYPE    161    196    172
D48V7, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           72                            161
  CLUS_2                           39                            196
  CLUS_3                           20                            172
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       66     39     26
  DEL PEAK 16(6Q22.31) WILD-TYPE    137    151    241
D48V8, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           66                            137
  CLUS_2                           39                            151
  CLUS_3                           26                            241
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       34     18     19      6
  DEL PEAK 16(6Q22.31) WILD-TYPE    103     89    164     76
D48V9, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           34                            103
  CLUS_2                           18                             89
  CLUS_3                           19                            164
  CLUS_4                            6                             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       35     21     21
  DEL PEAK 16(6Q22.31) WILD-TYPE    187    163     82
D48V10, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           35                            187
  CLUS_2                           21                            163
  CLUS_3                           21                             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(6Q22.31) MUTATED       40     18     17
  DEL PEAK 16(6Q22.31) WILD-TYPE    145    143    142
D48V11, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           40                            145
  CLUS_2                           18                            143
  CLUS_3                           17                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(6Q22.31) MUTATED       24     11     18     22
  DEL PEAK 16(6Q22.31) WILD-TYPE     67    126    170     67
D48V12, multiclass
        clus
vv       DEL PEAK 16(6Q22.31) MUTATED DEL PEAK 16(6Q22.31) WILD-TYPE
  CLUS_1                           24                             67
  CLUS_2                           11                            126
  CLUS_3                           18                            170
  CLUS_4                           22                             67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 17(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       48     30     51     31
  DEL PEAK 17(6Q26) WILD-TYPE     99     66    101     82
D49V1, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        48                          99
  CLUS_2                        30                          66
  CLUS_3                        51                         101
  CLUS_4                        31                          82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       46     28     33     53
  DEL PEAK 17(6Q26) WILD-TYPE    102     74     67    105
D49V2, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        46                         102
  CLUS_2                        28                          74
  CLUS_3                        33                          67
  CLUS_4                        53                         105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       50     64     24     33
  DEL PEAK 17(6Q26) WILD-TYPE    106    119     63     87
D49V3, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        50                         106
  CLUS_2                        64                         119
  CLUS_3                        24                          63
  CLUS_4                        33                          87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       86     41     44
  DEL PEAK 17(6Q26) WILD-TYPE    207     83     85
D49V4, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        86                         207
  CLUS_2                        41                          83
  CLUS_3                        44                          85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED      176     83      2
  DEL PEAK 17(6Q26) WILD-TYPE    357    459     13
D49V5, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                       176                         357
  CLUS_2                        83                         459
  CLUS_3                         2                          13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       52     51     14      8
  DEL PEAK 17(6Q26) WILD-TYPE    132    186     50    157
D49V6, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        52                         132
  CLUS_2                        51                         186
  CLUS_3                        14                          50
  CLUS_4                         8                         157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       75     43     20
  DEL PEAK 17(6Q26) WILD-TYPE    158    192    172
D49V7, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        75                         158
  CLUS_2                        43                         192
  CLUS_3                        20                         172
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       69     43     26
  DEL PEAK 17(6Q26) WILD-TYPE    134    147    241
D49V8, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        69                         134
  CLUS_2                        43                         147
  CLUS_3                        26                         241
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       39     17     20      5
  DEL PEAK 17(6Q26) WILD-TYPE     98     90    163     77
D49V9, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        39                          98
  CLUS_2                        17                          90
  CLUS_3                        20                         163
  CLUS_4                         5                          77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       39     22     20
  DEL PEAK 17(6Q26) WILD-TYPE    183    162     83
D49V10, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        39                         183
  CLUS_2                        22                         162
  CLUS_3                        20                          83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(6Q26) MUTATED       42     18     18
  DEL PEAK 17(6Q26) WILD-TYPE    143    143    141
D49V11, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        42                         143
  CLUS_2                        18                         143
  CLUS_3                        18                         141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(6Q26) MUTATED       27     11     19     21
  DEL PEAK 17(6Q26) WILD-TYPE     64    126    169     68
D49V12, multiclass
        clus
vv       DEL PEAK 17(6Q26) MUTATED DEL PEAK 17(6Q26) WILD-TYPE
  CLUS_1                        27                          64
  CLUS_2                        11                         126
  CLUS_3                        19                         169
  CLUS_4                        21                          68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 18(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       23      9     16     11
  DEL PEAK 18(8P23.2) WILD-TYPE    124     87    136    102
D50V1, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          23                           124
  CLUS_2                           9                            87
  CLUS_3                          16                           136
  CLUS_4                          11                           102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       24     11      9     15
  DEL PEAK 18(8P23.2) WILD-TYPE    124     91     91    143
D50V2, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          24                           124
  CLUS_2                          11                            91
  CLUS_3                           9                            91
  CLUS_4                          15                           143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       25     19      6     14
  DEL PEAK 18(8P23.2) WILD-TYPE    131    164     81    106
D50V3, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          25                           131
  CLUS_2                          19                           164
  CLUS_3                           6                            81
  CLUS_4                          14                           106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       29     19     16
  DEL PEAK 18(8P23.2) WILD-TYPE    264    105    113
D50V4, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          29                           264
  CLUS_2                          19                           105
  CLUS_3                          16                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       64     24      0
  DEL PEAK 18(8P23.2) WILD-TYPE    469    518     15
D50V5, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          64                           469
  CLUS_2                          24                           518
  CLUS_3                           0                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED       23     11      1      0
  DEL PEAK 18(8P23.2) WILD-TYPE    161    226     63    165
D50V6, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          23                           161
  CLUS_2                          11                           226
  CLUS_3                           1                            63
  CLUS_4                           0                           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       25      5      6
  DEL PEAK 18(8P23.2) WILD-TYPE    208    230    186
D50V7, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          25                           208
  CLUS_2                           5                           230
  CLUS_3                           6                           186
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED       22      8      6
  DEL PEAK 18(8P23.2) WILD-TYPE    181    182    261
D50V8, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                          22                           181
  CLUS_2                           8                           182
  CLUS_3                           6                           261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED        9      7      5      1
  DEL PEAK 18(8P23.2) WILD-TYPE    128    100    178     81
D50V9, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                           9                           128
  CLUS_2                           7                           100
  CLUS_3                           5                           178
  CLUS_4                           1                            81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED        9      3     10
  DEL PEAK 18(8P23.2) WILD-TYPE    213    181     93
D50V10, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                           9                           213
  CLUS_2                           3                           181
  CLUS_3                          10                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(8P23.2) MUTATED        8      7      6
  DEL PEAK 18(8P23.2) WILD-TYPE    177    154    153
D50V11, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                           8                           177
  CLUS_2                           7                           154
  CLUS_3                           6                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(8P23.2) MUTATED        1      7      3     10
  DEL PEAK 18(8P23.2) WILD-TYPE     90    130    185     79
D50V12, multiclass
        clus
vv       DEL PEAK 18(8P23.2) MUTATED DEL PEAK 18(8P23.2) WILD-TYPE
  CLUS_1                           1                            90
  CLUS_2                           7                           130
  CLUS_3                           3                           185
  CLUS_4                          10                            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 19(8Q24.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED       10     14     16      8
  DEL PEAK 19(8Q24.3) WILD-TYPE    137     82    136    105
D51V1, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          10                           137
  CLUS_2                          14                            82
  CLUS_3                          16                           136
  CLUS_4                           8                           105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED       13      8     10     17
  DEL PEAK 19(8Q24.3) WILD-TYPE    135     94     90    141
D51V2, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          13                           135
  CLUS_2                           8                            94
  CLUS_3                          10                            90
  CLUS_4                          17                           141
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED       25     14      8      4
  DEL PEAK 19(8Q24.3) WILD-TYPE    131    169     79    116
D51V3, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          25                           131
  CLUS_2                          14                           169
  CLUS_3                           8                            79
  CLUS_4                           4                           116
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       30      8     13
  DEL PEAK 19(8Q24.3) WILD-TYPE    263    116    116
D51V4, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          30                           263
  CLUS_2                           8                           116
  CLUS_3                          13                           116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       57     21      0
  DEL PEAK 19(8Q24.3) WILD-TYPE    476    521     15
D51V5, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          57                           476
  CLUS_2                          21                           521
  CLUS_3                           0                            15
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED       20     17      1      0
  DEL PEAK 19(8Q24.3) WILD-TYPE    164    220     63    165
D51V6, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          20                           164
  CLUS_2                          17                           220
  CLUS_3                           1                            63
  CLUS_4                           0                           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       22     10      7
  DEL PEAK 19(8Q24.3) WILD-TYPE    211    225    185
D51V7, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          22                           211
  CLUS_2                          10                           225
  CLUS_3                           7                           185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       20     12      7
  DEL PEAK 19(8Q24.3) WILD-TYPE    183    178    260
D51V8, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          20                           183
  CLUS_2                          12                           178
  CLUS_3                           7                           260
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED       12      9      6      0
  DEL PEAK 19(8Q24.3) WILD-TYPE    125     98    177     82
D51V9, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          12                           125
  CLUS_2                           9                            98
  CLUS_3                           6                           177
  CLUS_4                           0                            82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       10      4     13
  DEL PEAK 19(8Q24.3) WILD-TYPE    212    180     90
D51V10, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          10                           212
  CLUS_2                           4                           180
  CLUS_3                          13                            90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(8Q24.3) MUTATED       14      7      5
  DEL PEAK 19(8Q24.3) WILD-TYPE    171    154    154
D51V11, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                          14                           171
  CLUS_2                           7                           154
  CLUS_3                           5                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(8Q24.3) MUTATED        7      6      4      9
  DEL PEAK 19(8Q24.3) WILD-TYPE     84    131    184     80
D51V12, multiclass
        clus
vv       DEL PEAK 19(8Q24.3) MUTATED DEL PEAK 19(8Q24.3) WILD-TYPE
  CLUS_1                           7                            84
  CLUS_2                           6                           131
  CLUS_3                           4                           184
  CLUS_4                           9                            80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 20(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED      100     59    132     75
  DEL PEAK 20(9P21.3) WILD-TYPE     47     37     20     38
D52V1, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         100                            47
  CLUS_2                          59                            37
  CLUS_3                         132                            20
  CLUS_4                          75                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED      101     60     91    114
  DEL PEAK 20(9P21.3) WILD-TYPE     47     42      9     44
D52V2, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         101                            47
  CLUS_2                          60                            42
  CLUS_3                          91                             9
  CLUS_4                         114                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED      113    125     65     90
  DEL PEAK 20(9P21.3) WILD-TYPE     43     58     22     30
D52V3, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         113                            43
  CLUS_2                         125                            58
  CLUS_3                          65                            22
  CLUS_4                          90                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      196     96    101
  DEL PEAK 20(9P21.3) WILD-TYPE     97     28     28
D52V4, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         196                            97
  CLUS_2                          96                            28
  CLUS_3                         101                            28
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      406    181      6
  DEL PEAK 20(9P21.3) WILD-TYPE    127    361      9
D52V5, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         406                           127
  CLUS_2                         181                           361
  CLUS_3                           6                             9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED      142     93     20     28
  DEL PEAK 20(9P21.3) WILD-TYPE     42    144     44    137
D52V6, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         142                            42
  CLUS_2                          93                           144
  CLUS_3                          20                            44
  CLUS_4                          28                           137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      160     62     56
  DEL PEAK 20(9P21.3) WILD-TYPE     73    173    136
D52V7, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         160                            73
  CLUS_2                          62                           173
  CLUS_3                          56                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED      144     65     69
  DEL PEAK 20(9P21.3) WILD-TYPE     59    125    198
D52V8, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                         144                            59
  CLUS_2                          65                           125
  CLUS_3                          69                           198
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       49     44     56     25
  DEL PEAK 20(9P21.3) WILD-TYPE     88     63    127     57
D52V9, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          49                            88
  CLUS_2                          44                            63
  CLUS_3                          56                           127
  CLUS_4                          25                            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       59     56     59
  DEL PEAK 20(9P21.3) WILD-TYPE    163    128     44
D52V10, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          59                           163
  CLUS_2                          56                           128
  CLUS_3                          59                            44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(9P21.3) MUTATED       81     41     51
  DEL PEAK 20(9P21.3) WILD-TYPE    104    120    108
D52V11, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          81                           104
  CLUS_2                          41                           120
  CLUS_3                          51                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(9P21.3) MUTATED       31     28     54     60
  DEL PEAK 20(9P21.3) WILD-TYPE     60    109    134     29
D52V12, multiclass
        clus
vv       DEL PEAK 20(9P21.3) MUTATED DEL PEAK 20(9P21.3) WILD-TYPE
  CLUS_1                          31                            60
  CLUS_2                          28                           109
  CLUS_3                          54                           134
  CLUS_4                          60                            29
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 21(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED      129     63    134     82
  DEL PEAK 21(10P15.3) WILD-TYPE     18     33     18     31
D53V1, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          129                             18
  CLUS_2                           63                             33
  CLUS_3                          134                             18
  CLUS_4                           82                             31
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED      125     59     89    135
  DEL PEAK 21(10P15.3) WILD-TYPE     23     43     11     23
D53V2, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          125                             23
  CLUS_2                           59                             43
  CLUS_3                           89                             11
  CLUS_4                          135                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED      139    137     70     97
  DEL PEAK 21(10P15.3) WILD-TYPE     17     46     17     23
D53V3, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          139                             17
  CLUS_2                          137                             46
  CLUS_3                           70                             17
  CLUS_4                           97                             23
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED      223    105    115
  DEL PEAK 21(10P15.3) WILD-TYPE     70     19     14
D53V4, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          223                             70
  CLUS_2                          105                             19
  CLUS_3                          115                             14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED      488     52     13
  DEL PEAK 21(10P15.3) WILD-TYPE     45    490      2
D53V5, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          488                             45
  CLUS_2                           52                            490
  CLUS_3                           13                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED      168      8     21      7
  DEL PEAK 21(10P15.3) WILD-TYPE     16    229     43    158
D53V6, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          168                             16
  CLUS_2                            8                            229
  CLUS_3                           21                             43
  CLUS_4                            7                            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED      184      4     22
  DEL PEAK 21(10P15.3) WILD-TYPE     49    231    170
D53V7, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          184                             49
  CLUS_2                            4                            231
  CLUS_3                           22                            170
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED      178      9     23
  DEL PEAK 21(10P15.3) WILD-TYPE     25    181    244
D53V8, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                          178                             25
  CLUS_2                            9                            181
  CLUS_3                           23                            244
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED       33     26     19      5
  DEL PEAK 21(10P15.3) WILD-TYPE    104     81    164     77
D53V9, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                           33                            104
  CLUS_2                           26                             81
  CLUS_3                           19                            164
  CLUS_4                            5                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED       11     13     59
  DEL PEAK 21(10P15.3) WILD-TYPE    211    171     44
D53V10, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                           11                            211
  CLUS_2                           13                            171
  CLUS_3                           59                             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(10P15.3) MUTATED       61      4     18
  DEL PEAK 21(10P15.3) WILD-TYPE    124    157    141
D53V11, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                           61                            124
  CLUS_2                            4                            157
  CLUS_3                           18                            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(10P15.3) MUTATED        4      6     10     63
  DEL PEAK 21(10P15.3) WILD-TYPE     87    131    178     26
D53V12, multiclass
        clus
vv       DEL PEAK 21(10P15.3) MUTATED DEL PEAK 21(10P15.3) WILD-TYPE
  CLUS_1                            4                             87
  CLUS_2                            6                            131
  CLUS_3                           10                            178
  CLUS_4                           63                             26
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 22(10P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED      131     65    135     79
  DEL PEAK 22(10P13) WILD-TYPE     16     31     17     34
D54V1, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        131                           16
  CLUS_2                         65                           31
  CLUS_3                        135                           17
  CLUS_4                         79                           34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED      129     58     89    134
  DEL PEAK 22(10P13) WILD-TYPE     19     44     11     24
D54V2, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        129                           19
  CLUS_2                         58                           44
  CLUS_3                         89                           11
  CLUS_4                        134                           24
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED      141    138     68     99
  DEL PEAK 22(10P13) WILD-TYPE     15     45     19     21
D54V3, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        141                           15
  CLUS_2                        138                           45
  CLUS_3                         68                           19
  CLUS_4                         99                           21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED      223    108    115
  DEL PEAK 22(10P13) WILD-TYPE     70     16     14
D54V4, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        223                           70
  CLUS_2                        108                           16
  CLUS_3                        115                           14
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED      489     51     13
  DEL PEAK 22(10P13) WILD-TYPE     44    491      2
D54V5, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        489                           44
  CLUS_2                         51                          491
  CLUS_3                         13                            2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED      168      6     21      7
  DEL PEAK 22(10P13) WILD-TYPE     16    231     43    158
D54V6, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        168                           16
  CLUS_2                          6                          231
  CLUS_3                         21                           43
  CLUS_4                          7                          158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED      184      4     21
  DEL PEAK 22(10P13) WILD-TYPE     49    231    171
D54V7, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        184                           49
  CLUS_2                          4                          231
  CLUS_3                         21                          171
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED      178      9     22
  DEL PEAK 22(10P13) WILD-TYPE     25    181    245
D54V8, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                        178                           25
  CLUS_2                          9                          181
  CLUS_3                         22                          245
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED       33     26     18      5
  DEL PEAK 22(10P13) WILD-TYPE    104     81    165     77
D54V9, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                         33                          104
  CLUS_2                         26                           81
  CLUS_3                         18                          165
  CLUS_4                          5                           77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED       11     11     60
  DEL PEAK 22(10P13) WILD-TYPE    211    173     43
D54V10, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                         11                          211
  CLUS_2                         11                          173
  CLUS_3                         60                           43
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(10P13) MUTATED       62      3     17
  DEL PEAK 22(10P13) WILD-TYPE    123    158    142
D54V11, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                         62                          123
  CLUS_2                          3                          158
  CLUS_3                         17                          142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(10P13) MUTATED        4      5      9     64
  DEL PEAK 22(10P13) WILD-TYPE     87    132    179     25
D54V12, multiclass
        clus
vv       DEL PEAK 22(10P13) MUTATED DEL PEAK 22(10P13) WILD-TYPE
  CLUS_1                          4                           87
  CLUS_2                          5                          132
  CLUS_3                          9                          179
  CLUS_4                         64                           25
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 23(10P11.23) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED      130     61    142     83
  DEL PEAK 23(10P11.23) WILD-TYPE     17     35     10     30
D55V1, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           130                              17
  CLUS_2                            61                              35
  CLUS_3                           142                              10
  CLUS_4                            83                              30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED      127     60     93    136
  DEL PEAK 23(10P11.23) WILD-TYPE     21     42      7     22
D55V2, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           127                              21
  CLUS_2                            60                              42
  CLUS_3                            93                               7
  CLUS_4                           136                              22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED      145    139     67     99
  DEL PEAK 23(10P11.23) WILD-TYPE     11     44     20     21
D55V3, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           145                              11
  CLUS_2                           139                              44
  CLUS_3                            67                              20
  CLUS_4                            99                              21
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED      223    106    121
  DEL PEAK 23(10P11.23) WILD-TYPE     70     18      8
D55V4, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           223                              70
  CLUS_2                           106                              18
  CLUS_3                           121                               8
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED      496     49     13
  DEL PEAK 23(10P11.23) WILD-TYPE     37    493      2
D55V5, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           496                              37
  CLUS_2                            49                             493
  CLUS_3                            13                               2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED      169      6     21      7
  DEL PEAK 23(10P11.23) WILD-TYPE     15    231     43    158
D55V6, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           169                              15
  CLUS_2                             6                             231
  CLUS_3                            21                              43
  CLUS_4                             7                             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED      185      3     23
  DEL PEAK 23(10P11.23) WILD-TYPE     48    232    169
D55V7, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           185                              48
  CLUS_2                             3                             232
  CLUS_3                            23                             169
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED      179      8     24
  DEL PEAK 23(10P11.23) WILD-TYPE     24    182    243
D55V8, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                           179                              24
  CLUS_2                             8                             182
  CLUS_3                            24                             243
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED       33     26     19      4
  DEL PEAK 23(10P11.23) WILD-TYPE    104     81    164     78
D55V9, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                            33                             104
  CLUS_2                            26                              81
  CLUS_3                            19                             164
  CLUS_4                             4                              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED       11     13     58
  DEL PEAK 23(10P11.23) WILD-TYPE    211    171     45
D55V10, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                            11                             211
  CLUS_2                            13                             171
  CLUS_3                            58                              45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(10P11.23) MUTATED       60      3     19
  DEL PEAK 23(10P11.23) WILD-TYPE    125    158    140
D55V11, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                            60                             125
  CLUS_2                             3                             158
  CLUS_3                            19                             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(10P11.23) MUTATED        4      5     11     62
  DEL PEAK 23(10P11.23) WILD-TYPE     87    132    177     27
D55V12, multiclass
        clus
vv       DEL PEAK 23(10P11.23) MUTATED DEL PEAK 23(10P11.23) WILD-TYPE
  CLUS_1                             4                              87
  CLUS_2                             5                             132
  CLUS_3                            11                             177
  CLUS_4                            62                              27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 24(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED      136     75    147     91
  DEL PEAK 24(10Q23.31) WILD-TYPE     11     21      5     22
D56V1, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           136                              11
  CLUS_2                            75                              21
  CLUS_3                           147                               5
  CLUS_4                            91                              22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED      132     75     98    144
  DEL PEAK 24(10Q23.31) WILD-TYPE     16     27      2     14
D56V2, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           132                              16
  CLUS_2                            75                              27
  CLUS_3                            98                               2
  CLUS_4                           144                              14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED      148    158     72    107
  DEL PEAK 24(10Q23.31) WILD-TYPE      8     25     15     13
D56V3, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           148                               8
  CLUS_2                           158                              25
  CLUS_3                            72                              15
  CLUS_4                           107                              13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED      248    115    122
  DEL PEAK 24(10Q23.31) WILD-TYPE     45      9      7
D56V4, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           248                              45
  CLUS_2                           115                               9
  CLUS_3                           122                               7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED      513    100     15
  DEL PEAK 24(10Q23.31) WILD-TYPE     20    442      0
D56V5, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           513                              20
  CLUS_2                           100                             442
  CLUS_3                            15                               0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED      175     37     21      8
  DEL PEAK 24(10Q23.31) WILD-TYPE      9    200     43    157
D56V6, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           175                               9
  CLUS_2                            37                             200
  CLUS_3                            21                              43
  CLUS_4                             8                             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED      197     24     27
  DEL PEAK 24(10Q23.31) WILD-TYPE     36    211    165
D56V7, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           197                              36
  CLUS_2                            24                             211
  CLUS_3                            27                             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED      186     32     30
  DEL PEAK 24(10Q23.31) WILD-TYPE     17    158    237
D56V8, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                           186                              17
  CLUS_2                            32                             158
  CLUS_3                            30                             237
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED       40     37     29      8
  DEL PEAK 24(10Q23.31) WILD-TYPE     97     70    154     74
D56V9, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            40                              97
  CLUS_2                            37                              70
  CLUS_3                            29                             154
  CLUS_4                             8                              74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED       24     18     72
  DEL PEAK 24(10Q23.31) WILD-TYPE    198    166     31
D56V10, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            24                             198
  CLUS_2                            18                             166
  CLUS_3                            72                              31
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(10Q23.31) MUTATED       75     14     25
  DEL PEAK 24(10Q23.31) WILD-TYPE    110    147    134
D56V11, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            75                             110
  CLUS_2                            14                             147
  CLUS_3                            25                             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(10Q23.31) MUTATED       12     11     21     70
  DEL PEAK 24(10Q23.31) WILD-TYPE     79    126    167     19
D56V12, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            12                              79
  CLUS_2                            11                             126
  CLUS_3                            21                             167
  CLUS_4                            70                              19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 25(10Q26.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED      136     75    148     91
  DEL PEAK 25(10Q26.3) WILD-TYPE     11     21      4     22
D57V1, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          136                             11
  CLUS_2                           75                             21
  CLUS_3                          148                              4
  CLUS_4                           91                             22
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED      132     77     97    144
  DEL PEAK 25(10Q26.3) WILD-TYPE     16     25      3     14
D57V2, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          132                             16
  CLUS_2                           77                             25
  CLUS_3                           97                              3
  CLUS_4                          144                             14
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED      146    162     71    107
  DEL PEAK 25(10Q26.3) WILD-TYPE     10     21     16     13
D57V3, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          146                             10
  CLUS_2                          162                             21
  CLUS_3                           71                             16
  CLUS_4                          107                             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED      252    109    125
  DEL PEAK 25(10Q26.3) WILD-TYPE     41     15      4
D57V4, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          252                             41
  CLUS_2                          109                             15
  CLUS_3                          125                              4
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED      513    137     15
  DEL PEAK 25(10Q26.3) WILD-TYPE     20    405      0
D57V5, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          513                             20
  CLUS_2                          137                            405
  CLUS_3                           15                              0
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED      175     71     23      9
  DEL PEAK 25(10Q26.3) WILD-TYPE      9    166     41    156
D57V6, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          175                              9
  CLUS_2                           71                            166
  CLUS_3                           23                             41
  CLUS_4                            9                            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED      201     46     37
  DEL PEAK 25(10Q26.3) WILD-TYPE     32    189    155
D57V7, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          201                             32
  CLUS_2                           46                            189
  CLUS_3                           37                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED      185     59     40
  DEL PEAK 25(10Q26.3) WILD-TYPE     18    131    227
D57V8, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                          185                             18
  CLUS_2                           59                            131
  CLUS_3                           40                            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED       55     46     38     11
  DEL PEAK 25(10Q26.3) WILD-TYPE     82     61    145     71
D57V9, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           55                             82
  CLUS_2                           46                             61
  CLUS_3                           38                            145
  CLUS_4                           11                             71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       49     28     73
  DEL PEAK 25(10Q26.3) WILD-TYPE    173    156     30
D57V10, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           49                            173
  CLUS_2                           28                            156
  CLUS_3                           73                             30
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(10Q26.3) MUTATED       93     22     35
  DEL PEAK 25(10Q26.3) WILD-TYPE     92    139    124
D57V11, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           93                             92
  CLUS_2                           22                            139
  CLUS_3                           35                            124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(10Q26.3) MUTATED       28     18     32     72
  DEL PEAK 25(10Q26.3) WILD-TYPE     63    119    156     17
D57V12, multiclass
        clus
vv       DEL PEAK 25(10Q26.3) MUTATED DEL PEAK 25(10Q26.3) WILD-TYPE
  CLUS_1                           28                             63
  CLUS_2                           18                            119
  CLUS_3                           32                            156
  CLUS_4                           72                             17
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 26(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       32     42     13     31
  DEL PEAK 26(11P15.5) WILD-TYPE    115     54    139     82
D58V1, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           32                            115
  CLUS_2                           42                             54
  CLUS_3                           13                            139
  CLUS_4                           31                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       30     48      9     31
  DEL PEAK 26(11P15.5) WILD-TYPE    118     54     91    127
D58V2, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           30                            118
  CLUS_2                           48                             54
  CLUS_3                            9                             91
  CLUS_4                           31                            127
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       30     52     20     23
  DEL PEAK 26(11P15.5) WILD-TYPE    126    131     67     97
D58V3, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           30                            126
  CLUS_2                           52                            131
  CLUS_3                           20                             67
  CLUS_4                           23                             97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       84     23     18
  DEL PEAK 26(11P15.5) WILD-TYPE    209    101    111
D58V4, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           84                            209
  CLUS_2                           23                            101
  CLUS_3                           18                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       96    130      8
  DEL PEAK 26(11P15.5) WILD-TYPE    437    412      7
D58V5, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           96                            437
  CLUS_2                          130                            412
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       23     93      7      1
  DEL PEAK 26(11P15.5) WILD-TYPE    161    144     57    164
D58V6, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           23                            161
  CLUS_2                           93                            144
  CLUS_3                            7                             57
  CLUS_4                            1                            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       53     53     32
  DEL PEAK 26(11P15.5) WILD-TYPE    180    182    160
D58V7, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           53                            180
  CLUS_2                           53                            182
  CLUS_3                           32                            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       34     72     32
  DEL PEAK 26(11P15.5) WILD-TYPE    169    118    235
D58V8, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           34                            169
  CLUS_2                           72                            118
  CLUS_3                           32                            235
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       24     39     34      8
  DEL PEAK 26(11P15.5) WILD-TYPE    113     68    149     74
D58V9, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           24                            113
  CLUS_2                           39                             68
  CLUS_3                           34                            149
  CLUS_4                            8                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       43     30     32
  DEL PEAK 26(11P15.5) WILD-TYPE    179    154     71
D58V10, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           43                            179
  CLUS_2                           30                            154
  CLUS_3                           32                             71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(11P15.5) MUTATED       38     33     33
  DEL PEAK 26(11P15.5) WILD-TYPE    147    128    126
D58V11, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           38                            147
  CLUS_2                           33                            128
  CLUS_3                           33                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(11P15.5) MUTATED       21     27     37     19
  DEL PEAK 26(11P15.5) WILD-TYPE     70    110    151     70
D58V12, multiclass
        clus
vv       DEL PEAK 26(11P15.5) MUTATED DEL PEAK 26(11P15.5) WILD-TYPE
  CLUS_1                           21                             70
  CLUS_2                           27                            110
  CLUS_3                           37                            151
  CLUS_4                           19                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 27(11P15.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       28     35      8     23
  DEL PEAK 27(11P15.1) WILD-TYPE    119     61    144     90
D59V1, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           28                            119
  CLUS_2                           35                             61
  CLUS_3                            8                            144
  CLUS_4                           23                             90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       27     37      4     26
  DEL PEAK 27(11P15.1) WILD-TYPE    121     65     96    132
D59V2, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           27                            121
  CLUS_2                           37                             65
  CLUS_3                            4                             96
  CLUS_4                           26                            132
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       25     37     16     22
  DEL PEAK 27(11P15.1) WILD-TYPE    131    146     71     98
D59V3, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           25                            131
  CLUS_2                           37                            146
  CLUS_3                           16                             71
  CLUS_4                           22                             98
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       63     21     16
  DEL PEAK 27(11P15.1) WILD-TYPE    230    103    113
D59V4, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           63                            230
  CLUS_2                           21                            103
  CLUS_3                           16                            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       82     86      8
  DEL PEAK 27(11P15.1) WILD-TYPE    451    456      7
D59V5, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           82                            451
  CLUS_2                           86                            456
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       21     58      8      1
  DEL PEAK 27(11P15.1) WILD-TYPE    163    179     56    164
D59V6, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           21                            163
  CLUS_2                           58                            179
  CLUS_3                            8                             56
  CLUS_4                            1                            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       51     31     18
  DEL PEAK 27(11P15.1) WILD-TYPE    182    204    174
D59V7, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           51                            182
  CLUS_2                           31                            204
  CLUS_3                           18                            174
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       34     49     17
  DEL PEAK 27(11P15.1) WILD-TYPE    169    141    250
D59V8, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           34                            169
  CLUS_2                           49                            141
  CLUS_3                           17                            250
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       16     32     19      5
  DEL PEAK 27(11P15.1) WILD-TYPE    121     75    164     77
D59V9, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           16                            121
  CLUS_2                           32                             75
  CLUS_3                           19                            164
  CLUS_4                            5                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       27     16     29
  DEL PEAK 27(11P15.1) WILD-TYPE    195    168     74
D59V10, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           27                            195
  CLUS_2                           16                            168
  CLUS_3                           29                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(11P15.1) MUTATED       28     22     21
  DEL PEAK 27(11P15.1) WILD-TYPE    157    139    138
D59V11, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           28                            157
  CLUS_2                           22                            139
  CLUS_3                           21                            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(11P15.1) MUTATED       13     18     19     21
  DEL PEAK 27(11P15.1) WILD-TYPE     78    119    169     68
D59V12, multiclass
        clus
vv       DEL PEAK 27(11P15.1) MUTATED DEL PEAK 27(11P15.1) WILD-TYPE
  CLUS_1                           13                             78
  CLUS_2                           18                            119
  CLUS_3                           19                            169
  CLUS_4                           21                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 28(11P11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED       27     35     10     23
  DEL PEAK 28(11P11.2) WILD-TYPE    120     61    142     90
D60V1, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           27                            120
  CLUS_2                           35                             61
  CLUS_3                           10                            142
  CLUS_4                           23                             90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED       27     36      5     27
  DEL PEAK 28(11P11.2) WILD-TYPE    121     66     95    131
D60V2, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           27                            121
  CLUS_2                           36                             66
  CLUS_3                            5                             95
  CLUS_4                           27                            131
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED       24     38     14     25
  DEL PEAK 28(11P11.2) WILD-TYPE    132    145     73     95
D60V3, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           24                            132
  CLUS_2                           38                            145
  CLUS_3                           14                             73
  CLUS_4                           25                             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       65     22     14
  DEL PEAK 28(11P11.2) WILD-TYPE    228    102    115
D60V4, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           65                            228
  CLUS_2                           22                            102
  CLUS_3                           14                            115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       87     64      8
  DEL PEAK 28(11P11.2) WILD-TYPE    446    478      7
D60V5, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           87                            446
  CLUS_2                           64                            478
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED       24     39      7      0
  DEL PEAK 28(11P11.2) WILD-TYPE    160    198     57    165
D60V6, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           24                            160
  CLUS_2                           39                            198
  CLUS_3                            7                             57
  CLUS_4                            0                            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       48     20     12
  DEL PEAK 28(11P11.2) WILD-TYPE    185    215    180
D60V7, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           48                            185
  CLUS_2                           20                            215
  CLUS_3                           12                            180
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       34     35     11
  DEL PEAK 28(11P11.2) WILD-TYPE    169    155    256
D60V8, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           34                            169
  CLUS_2                           35                            155
  CLUS_3                           11                            256
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED       11     24     15      4
  DEL PEAK 28(11P11.2) WILD-TYPE    126     83    168     78
D60V9, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           11                            126
  CLUS_2                           24                             83
  CLUS_3                           15                            168
  CLUS_4                            4                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       18     10     26
  DEL PEAK 28(11P11.2) WILD-TYPE    204    174     77
D60V10, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           18                            204
  CLUS_2                           10                            174
  CLUS_3                           26                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(11P11.2) MUTATED       24     14     15
  DEL PEAK 28(11P11.2) WILD-TYPE    161    147    144
D60V11, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                           24                            161
  CLUS_2                           14                            147
  CLUS_3                           15                            144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(11P11.2) MUTATED        8     13     11     21
  DEL PEAK 28(11P11.2) WILD-TYPE     83    124    177     68
D60V12, multiclass
        clus
vv       DEL PEAK 28(11P11.2) MUTATED DEL PEAK 28(11P11.2) WILD-TYPE
  CLUS_1                            8                             83
  CLUS_2                           13                            124
  CLUS_3                           11                            177
  CLUS_4                           21                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 29(12P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED       18     17     11     18
  DEL PEAK 29(12P13.1) WILD-TYPE    129     79    141     95
D61V1, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           18                            129
  CLUS_2                           17                             79
  CLUS_3                           11                            141
  CLUS_4                           18                             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED       17     20      5     22
  DEL PEAK 29(12P13.1) WILD-TYPE    131     82     95    136
D61V2, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           17                            131
  CLUS_2                           20                             82
  CLUS_3                            5                             95
  CLUS_4                           22                            136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED       20     26     15     10
  DEL PEAK 29(12P13.1) WILD-TYPE    136    157     72    110
D61V3, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           20                            136
  CLUS_2                           26                            157
  CLUS_3                           15                             72
  CLUS_4                           10                            110
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       45     12     14
  DEL PEAK 29(12P13.1) WILD-TYPE    248    112    115
D61V4, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           45                            248
  CLUS_2                           12                            112
  CLUS_3                           14                            115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       55     51      4
  DEL PEAK 29(12P13.1) WILD-TYPE    478    491     11
D61V5, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           55                            478
  CLUS_2                           51                            491
  CLUS_3                            4                             11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED       16     29      4      5
  DEL PEAK 29(12P13.1) WILD-TYPE    168    208     60    160
D61V6, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           16                            168
  CLUS_2                           29                            208
  CLUS_3                            4                             60
  CLUS_4                            5                            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       25     19     10
  DEL PEAK 29(12P13.1) WILD-TYPE    208    216    182
D61V7, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           25                            208
  CLUS_2                           19                            216
  CLUS_3                           10                            182
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       18     25     11
  DEL PEAK 29(12P13.1) WILD-TYPE    185    165    256
D61V8, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           18                            185
  CLUS_2                           25                            165
  CLUS_3                           11                            256
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED        7     15     11      5
  DEL PEAK 29(12P13.1) WILD-TYPE    130     92    172     77
D61V9, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                            7                            130
  CLUS_2                           15                             92
  CLUS_3                           11                            172
  CLUS_4                            5                             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       13     11     14
  DEL PEAK 29(12P13.1) WILD-TYPE    209    173     89
D61V10, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           13                            209
  CLUS_2                           11                            173
  CLUS_3                           14                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(12P13.1) MUTATED       14     13     11
  DEL PEAK 29(12P13.1) WILD-TYPE    171    148    148
D61V11, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                           14                            171
  CLUS_2                           13                            148
  CLUS_3                           11                            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(12P13.1) MUTATED        9      7     12     10
  DEL PEAK 29(12P13.1) WILD-TYPE     82    130    176     79
D61V12, multiclass
        clus
vv       DEL PEAK 29(12P13.1) MUTATED DEL PEAK 29(12P13.1) WILD-TYPE
  CLUS_1                            9                             82
  CLUS_2                            7                            130
  CLUS_3                           12                            176
  CLUS_4                           10                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 30(12Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       18     17     11     22
  DEL PEAK 30(12Q12) WILD-TYPE    129     79    141     91
D62V1, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         18                          129
  CLUS_2                         17                           79
  CLUS_3                         11                          141
  CLUS_4                         22                           91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       19     26      6     17
  DEL PEAK 30(12Q12) WILD-TYPE    129     76     94    141
D62V2, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         19                          129
  CLUS_2                         26                           76
  CLUS_3                          6                           94
  CLUS_4                         17                          141
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       17     32     11     13
  DEL PEAK 30(12Q12) WILD-TYPE    139    151     76    107
D62V3, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         17                          139
  CLUS_2                         32                          151
  CLUS_3                         11                           76
  CLUS_4                         13                          107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       47     10     16
  DEL PEAK 30(12Q12) WILD-TYPE    246    114    113
D62V4, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         47                          246
  CLUS_2                         10                          114
  CLUS_3                         16                          113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       57     85      5
  DEL PEAK 30(12Q12) WILD-TYPE    476    457     10
D62V5, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         57                          476
  CLUS_2                         85                          457
  CLUS_3                          5                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       17     59      5      7
  DEL PEAK 30(12Q12) WILD-TYPE    167    178     59    158
D62V6, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         17                          167
  CLUS_2                         59                          178
  CLUS_3                          5                           59
  CLUS_4                          7                          158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       28     32     24
  DEL PEAK 30(12Q12) WILD-TYPE    205    203    168
D62V7, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         28                          205
  CLUS_2                         32                          203
  CLUS_3                         24                          168
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       17     42     25
  DEL PEAK 30(12Q12) WILD-TYPE    186    148    242
D62V8, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         17                          186
  CLUS_2                         42                          148
  CLUS_3                         25                          242
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       13     26     23      8
  DEL PEAK 30(12Q12) WILD-TYPE    124     81    160     74
D62V9, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         13                          124
  CLUS_2                         26                           81
  CLUS_3                         23                          160
  CLUS_4                          8                           74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       29     23     18
  DEL PEAK 30(12Q12) WILD-TYPE    193    161     85
D62V10, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         29                          193
  CLUS_2                         23                          161
  CLUS_3                         18                           85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(12Q12) MUTATED       24     22     24
  DEL PEAK 30(12Q12) WILD-TYPE    161    139    135
D62V11, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         24                          161
  CLUS_2                         22                          139
  CLUS_3                         24                          135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(12Q12) MUTATED       12     19     28     11
  DEL PEAK 30(12Q12) WILD-TYPE     79    118    160     78
D62V12, multiclass
        clus
vv       DEL PEAK 30(12Q12) MUTATED DEL PEAK 30(12Q12) WILD-TYPE
  CLUS_1                         12                           79
  CLUS_2                         19                          118
  CLUS_3                         28                          160
  CLUS_4                         11                           78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 31(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       21     21      7     20
  DEL PEAK 31(12Q15) WILD-TYPE    126     75    145     93
D63V1, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         21                          126
  CLUS_2                         21                           75
  CLUS_3                          7                          145
  CLUS_4                         20                           93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       20     22      4     23
  DEL PEAK 31(12Q15) WILD-TYPE    128     80     96    135
D63V2, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         20                          128
  CLUS_2                         22                           80
  CLUS_3                          4                           96
  CLUS_4                         23                          135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       18     31     10     17
  DEL PEAK 31(12Q15) WILD-TYPE    138    152     77    103
D63V3, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         18                          138
  CLUS_2                         31                          152
  CLUS_3                         10                           77
  CLUS_4                         17                          103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       45     13     18
  DEL PEAK 31(12Q15) WILD-TYPE    248    111    111
D63V4, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         45                          248
  CLUS_2                         13                          111
  CLUS_3                         18                          111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       62     75      5
  DEL PEAK 31(12Q15) WILD-TYPE    471    467     10
D63V5, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         62                          471
  CLUS_2                         75                          467
  CLUS_3                          5                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       16     57      4      5
  DEL PEAK 31(12Q15) WILD-TYPE    168    180     60    160
D63V6, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         16                          168
  CLUS_2                         57                          180
  CLUS_3                          4                           60
  CLUS_4                          5                          160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       29     31     20
  DEL PEAK 31(12Q15) WILD-TYPE    204    204    172
D63V7, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         29                          204
  CLUS_2                         31                          204
  CLUS_3                         20                          172
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       18     42     20
  DEL PEAK 31(12Q15) WILD-TYPE    185    148    247
D63V8, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         18                          185
  CLUS_2                         42                          148
  CLUS_3                         20                          247
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       11     26     20      6
  DEL PEAK 31(12Q15) WILD-TYPE    126     81    163     76
D63V9, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         11                          126
  CLUS_2                         26                           81
  CLUS_3                         20                          163
  CLUS_4                          6                           76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       27     19     17
  DEL PEAK 31(12Q15) WILD-TYPE    195    165     86
D63V10, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         27                          195
  CLUS_2                         19                          165
  CLUS_3                         17                           86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(12Q15) MUTATED       22     20     21
  DEL PEAK 31(12Q15) WILD-TYPE    163    141    138
D63V11, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         22                          163
  CLUS_2                         20                          141
  CLUS_3                         21                          138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(12Q15) MUTATED       13     17     23     10
  DEL PEAK 31(12Q15) WILD-TYPE     78    120    165     79
D63V12, multiclass
        clus
vv       DEL PEAK 31(12Q15) MUTATED DEL PEAK 31(12Q15) WILD-TYPE
  CLUS_1                         13                           78
  CLUS_2                         17                          120
  CLUS_3                         23                          165
  CLUS_4                         10                           79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 32(13Q14.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       81     45     36     53
  DEL PEAK 32(13Q14.2) WILD-TYPE     66     51    116     60
D64V1, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           81                             66
  CLUS_2                           45                             51
  CLUS_3                           36                            116
  CLUS_4                           53                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       68     50     21     76
  DEL PEAK 32(13Q14.2) WILD-TYPE     80     52     79     82
D64V2, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           68                             80
  CLUS_2                           50                             52
  CLUS_3                           21                             79
  CLUS_4                           76                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       70     78     39     42
  DEL PEAK 32(13Q14.2) WILD-TYPE     86    105     48     78
D64V3, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           70                             86
  CLUS_2                           78                            105
  CLUS_3                           39                             48
  CLUS_4                           42                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      132     52     45
  DEL PEAK 32(13Q14.2) WILD-TYPE    161     72     84
D64V4, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          132                            161
  CLUS_2                           52                             72
  CLUS_3                           45                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED      214    156     13
  DEL PEAK 32(13Q14.2) WILD-TYPE    319    386      2
D64V5, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                          214                            319
  CLUS_2                          156                            386
  CLUS_3                           13                              2
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       62     84     16     28
  DEL PEAK 32(13Q14.2) WILD-TYPE    122    153     48    137
D64V6, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           62                            122
  CLUS_2                           84                            153
  CLUS_3                           16                             48
  CLUS_4                           28                            137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       94     67     40
  DEL PEAK 32(13Q14.2) WILD-TYPE    139    168    152
D64V7, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           94                            139
  CLUS_2                           67                            168
  CLUS_3                           40                            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       73     74     54
  DEL PEAK 32(13Q14.2) WILD-TYPE    130    116    213
D64V8, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           73                            130
  CLUS_2                           74                            116
  CLUS_3                           54                            213
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       38     42     40     21
  DEL PEAK 32(13Q14.2) WILD-TYPE     99     65    143     61
D64V9, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           38                             99
  CLUS_2                           42                             65
  CLUS_3                           40                            143
  CLUS_4                           21                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       66     37     38
  DEL PEAK 32(13Q14.2) WILD-TYPE    156    147     65
D64V10, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           66                            156
  CLUS_2                           37                            147
  CLUS_3                           38                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(13Q14.2) MUTATED       53     49     39
  DEL PEAK 32(13Q14.2) WILD-TYPE    132    112    120
D64V11, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           53                            132
  CLUS_2                           49                            112
  CLUS_3                           39                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(13Q14.2) MUTATED       23     41     47     30
  DEL PEAK 32(13Q14.2) WILD-TYPE     68     96    141     59
D64V12, multiclass
        clus
vv       DEL PEAK 32(13Q14.2) MUTATED DEL PEAK 32(13Q14.2) WILD-TYPE
  CLUS_1                           23                             68
  CLUS_2                           41                             96
  CLUS_3                           47                            141
  CLUS_4                           30                             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 33(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       81     40     34     50
  DEL PEAK 33(13Q22.1) WILD-TYPE     66     56    118     63
D65V1, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           81                             66
  CLUS_2                           40                             56
  CLUS_3                           34                            118
  CLUS_4                           50                             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       68     45     21     71
  DEL PEAK 33(13Q22.1) WILD-TYPE     80     57     79     87
D65V2, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           68                             80
  CLUS_2                           45                             57
  CLUS_3                           21                             79
  CLUS_4                           71                             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       65     77     33     41
  DEL PEAK 33(13Q22.1) WILD-TYPE     91    106     54     79
D65V3, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           65                             91
  CLUS_2                           77                            106
  CLUS_3                           33                             54
  CLUS_4                           41                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED      122     50     44
  DEL PEAK 33(13Q22.1) WILD-TYPE    171     74     85
D65V4, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                          122                            171
  CLUS_2                           50                             74
  CLUS_3                           44                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED      206    149     12
  DEL PEAK 33(13Q22.1) WILD-TYPE    327    393      3
D65V5, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                          206                            327
  CLUS_2                          149                            393
  CLUS_3                           12                              3
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       62     76     15     29
  DEL PEAK 33(13Q22.1) WILD-TYPE    122    161     49    136
D65V6, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           62                            122
  CLUS_2                           76                            161
  CLUS_3                           15                             49
  CLUS_4                           29                            136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED       89     65     37
  DEL PEAK 33(13Q22.1) WILD-TYPE    144    170    155
D65V7, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           89                            144
  CLUS_2                           65                            170
  CLUS_3                           37                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED       71     69     51
  DEL PEAK 33(13Q22.1) WILD-TYPE    132    121    216
D65V8, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           71                            132
  CLUS_2                           69                            121
  CLUS_3                           51                            216
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       39     40     37     20
  DEL PEAK 33(13Q22.1) WILD-TYPE     98     67    146     62
D65V9, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           39                             98
  CLUS_2                           40                             67
  CLUS_3                           37                            146
  CLUS_4                           20                             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED       64     34     38
  DEL PEAK 33(13Q22.1) WILD-TYPE    158    150     65
D65V10, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           64                            158
  CLUS_2                           34                            150
  CLUS_3                           38                             65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(13Q22.1) MUTATED       50     49     37
  DEL PEAK 33(13Q22.1) WILD-TYPE    135    112    122
D65V11, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           50                            135
  CLUS_2                           49                            112
  CLUS_3                           37                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(13Q22.1) MUTATED       24     35     45     32
  DEL PEAK 33(13Q22.1) WILD-TYPE     67    102    143     57
D65V12, multiclass
        clus
vv       DEL PEAK 33(13Q22.1) MUTATED DEL PEAK 33(13Q22.1) WILD-TYPE
  CLUS_1                           24                             67
  CLUS_2                           35                            102
  CLUS_3                           45                            143
  CLUS_4                           32                             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 34(14Q13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED       54     39     25     43
  DEL PEAK 34(14Q13.1) WILD-TYPE     93     57    127     70
D66V1, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           54                             93
  CLUS_2                           39                             57
  CLUS_3                           25                            127
  CLUS_4                           43                             70
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED       49     42     15     55
  DEL PEAK 34(14Q13.1) WILD-TYPE     99     60     85    103
D66V2, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           49                             99
  CLUS_2                           42                             60
  CLUS_3                           15                             85
  CLUS_4                           55                            103
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED       44     64     27     37
  DEL PEAK 34(14Q13.1) WILD-TYPE    112    119     60     83
D66V3, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           44                            112
  CLUS_2                           64                            119
  CLUS_3                           27                             60
  CLUS_4                           37                             83
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED       96     35     41
  DEL PEAK 34(14Q13.1) WILD-TYPE    197     89     88
D66V4, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           96                            197
  CLUS_2                           35                             89
  CLUS_3                           41                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED      172     66      8
  DEL PEAK 34(14Q13.1) WILD-TYPE    361    476      7
D66V5, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                          172                            361
  CLUS_2                           66                            476
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED       63     21     14     17
  DEL PEAK 34(14Q13.1) WILD-TYPE    121    216     50    148
D66V6, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           63                            121
  CLUS_2                           21                            216
  CLUS_3                           14                             50
  CLUS_4                           17                            148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED       85     18     24
  DEL PEAK 34(14Q13.1) WILD-TYPE    148    217    168
D66V7, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           85                            148
  CLUS_2                           18                            217
  CLUS_3                           24                            168
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED       78     21     28
  DEL PEAK 34(14Q13.1) WILD-TYPE    125    169    239
D66V8, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           78                            125
  CLUS_2                           21                            169
  CLUS_3                           28                            239
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED       27     14     18      8
  DEL PEAK 34(14Q13.1) WILD-TYPE    110     93    165     74
D66V9, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           27                            110
  CLUS_2                           14                             93
  CLUS_3                           18                            165
  CLUS_4                            8                             74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED       22     18     27
  DEL PEAK 34(14Q13.1) WILD-TYPE    200    166     76
D66V10, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           22                            200
  CLUS_2                           18                            166
  CLUS_3                           27                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(14Q13.1) MUTATED       37     13     17
  DEL PEAK 34(14Q13.1) WILD-TYPE    148    148    142
D66V11, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                           37                            148
  CLUS_2                           13                            148
  CLUS_3                           17                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(14Q13.1) MUTATED        8     13     18     28
  DEL PEAK 34(14Q13.1) WILD-TYPE     83    124    170     61
D66V12, multiclass
        clus
vv       DEL PEAK 34(14Q13.1) MUTATED DEL PEAK 34(14Q13.1) WILD-TYPE
  CLUS_1                            8                             83
  CLUS_2                           13                            124
  CLUS_3                           18                            170
  CLUS_4                           28                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 35(14Q24.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       51     43     22     45
  DEL PEAK 35(14Q24.2) WILD-TYPE     96     53    130     68
D67V1, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           51                             96
  CLUS_2                           43                             53
  CLUS_3                           22                            130
  CLUS_4                           45                             68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       48     46     14     53
  DEL PEAK 35(14Q24.2) WILD-TYPE    100     56     86    105
D67V2, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           48                            100
  CLUS_2                           46                             56
  CLUS_3                           14                             86
  CLUS_4                           53                            105
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       38     69     24     36
  DEL PEAK 35(14Q24.2) WILD-TYPE    118    114     63     84
D67V3, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           38                            118
  CLUS_2                           69                            114
  CLUS_3                           24                             63
  CLUS_4                           36                             84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED      100     32     35
  DEL PEAK 35(14Q24.2) WILD-TYPE    193     92     94
D67V4, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                          100                            193
  CLUS_2                           32                             92
  CLUS_3                           35                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED      157    127      8
  DEL PEAK 35(14Q24.2) WILD-TYPE    376    415      7
D67V5, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                          157                            376
  CLUS_2                          127                            415
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       54     54     17     32
  DEL PEAK 35(14Q24.2) WILD-TYPE    130    183     47    133
D67V6, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           54                            130
  CLUS_2                           54                            183
  CLUS_3                           17                             47
  CLUS_4                           32                            133
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED       85     51     37
  DEL PEAK 35(14Q24.2) WILD-TYPE    148    184    155
D67V7, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           85                            148
  CLUS_2                           51                            184
  CLUS_3                           37                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED       73     50     50
  DEL PEAK 35(14Q24.2) WILD-TYPE    130    140    217
D67V8, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           73                            130
  CLUS_2                           50                            140
  CLUS_3                           50                            217
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       50     20     32     16
  DEL PEAK 35(14Q24.2) WILD-TYPE     87     87    151     66
D67V9, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           50                             87
  CLUS_2                           20                             87
  CLUS_3                           32                            151
  CLUS_4                           16                             66
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED       52     31     35
  DEL PEAK 35(14Q24.2) WILD-TYPE    170    153     68
D67V10, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           52                            170
  CLUS_2                           31                            153
  CLUS_3                           35                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(14Q24.2) MUTATED       56     38     24
  DEL PEAK 35(14Q24.2) WILD-TYPE    129    123    135
D67V11, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           56                            129
  CLUS_2                           38                            123
  CLUS_3                           24                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(14Q24.2) MUTATED       25     32     29     32
  DEL PEAK 35(14Q24.2) WILD-TYPE     66    105    159     57
D67V12, multiclass
        clus
vv       DEL PEAK 35(14Q24.2) MUTATED DEL PEAK 35(14Q24.2) WILD-TYPE
  CLUS_1                           25                             66
  CLUS_2                           32                            105
  CLUS_3                           29                            159
  CLUS_4                           32                             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 36(14Q31.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       51     39     16     41
  DEL PEAK 36(14Q31.3) WILD-TYPE     96     57    136     72
D68V1, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           51                             96
  CLUS_2                           39                             57
  CLUS_3                           16                            136
  CLUS_4                           41                             72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       47     41     10     49
  DEL PEAK 36(14Q31.3) WILD-TYPE    101     61     90    109
D68V2, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           47                            101
  CLUS_2                           41                             61
  CLUS_3                           10                             90
  CLUS_4                           49                            109
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       36     58     26     33
  DEL PEAK 36(14Q31.3) WILD-TYPE    120    125     61     87
D68V3, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           36                            120
  CLUS_2                           58                            125
  CLUS_3                           26                             61
  CLUS_4                           33                             87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED       92     31     30
  DEL PEAK 36(14Q31.3) WILD-TYPE    201     93     99
D68V4, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           92                            201
  CLUS_2                           31                             93
  CLUS_3                           30                             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED      147    120      8
  DEL PEAK 36(14Q31.3) WILD-TYPE    386    422      7
D68V5, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                          147                            386
  CLUS_2                          120                            422
  CLUS_3                            8                              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       53     56     16     29
  DEL PEAK 36(14Q31.3) WILD-TYPE    131    181     48    136
D68V6, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           53                            131
  CLUS_2                           56                            181
  CLUS_3                           16                             48
  CLUS_4                           29                            136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED       80     48     37
  DEL PEAK 36(14Q31.3) WILD-TYPE    153    187    155
D68V7, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           80                            153
  CLUS_2                           48                            187
  CLUS_3                           37                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED       69     48     48
  DEL PEAK 36(14Q31.3) WILD-TYPE    134    142    219
D68V8, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           69                            134
  CLUS_2                           48                            142
  CLUS_3                           48                            219
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       48     19     32     15
  DEL PEAK 36(14Q31.3) WILD-TYPE     89     88    151     67
D68V9, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           48                             89
  CLUS_2                           19                             88
  CLUS_3                           32                            151
  CLUS_4                           15                             67
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED       49     31     34
  DEL PEAK 36(14Q31.3) WILD-TYPE    173    153     69
D68V10, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           49                            173
  CLUS_2                           31                            153
  CLUS_3                           34                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(14Q31.3) MUTATED       54     36     24
  DEL PEAK 36(14Q31.3) WILD-TYPE    131    125    135
D68V11, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           54                            131
  CLUS_2                           36                            125
  CLUS_3                           24                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(14Q31.3) MUTATED       24     30     29     31
  DEL PEAK 36(14Q31.3) WILD-TYPE     67    107    159     58
D68V12, multiclass
        clus
vv       DEL PEAK 36(14Q31.3) MUTATED DEL PEAK 36(14Q31.3) WILD-TYPE
  CLUS_1                           24                             67
  CLUS_2                           30                            107
  CLUS_3                           29                            159
  CLUS_4                           31                             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 37(15Q14) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED       35     37     23     42
  DEL PEAK 37(15Q14) WILD-TYPE    112     59    129     71
D69V1, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         35                          112
  CLUS_2                         37                           59
  CLUS_3                         23                          129
  CLUS_4                         42                           71
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED       33     48     12     44
  DEL PEAK 37(15Q14) WILD-TYPE    115     54     88    114
D69V2, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         33                          115
  CLUS_2                         48                           54
  CLUS_3                         12                           88
  CLUS_4                         44                          114
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED       34     66     22     19
  DEL PEAK 37(15Q14) WILD-TYPE    122    117     65    101
D69V3, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         34                          122
  CLUS_2                         66                          117
  CLUS_3                         22                           65
  CLUS_4                         19                          101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED       94     15     32
  DEL PEAK 37(15Q14) WILD-TYPE    199    109     97
D69V4, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         94                          199
  CLUS_2                         15                          109
  CLUS_3                         32                           97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED      130     79      5
  DEL PEAK 37(15Q14) WILD-TYPE    403    463     10
D69V5, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                        130                          403
  CLUS_2                         79                          463
  CLUS_3                          5                           10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED       37     24      3     28
  DEL PEAK 37(15Q14) WILD-TYPE    147    213     61    137
D69V6, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         37                          147
  CLUS_2                         24                          213
  CLUS_3                          3                           61
  CLUS_4                         28                          137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED       58     29     19
  DEL PEAK 37(15Q14) WILD-TYPE    175    206    173
D69V7, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         58                          175
  CLUS_2                         29                          206
  CLUS_3                         19                          173
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED       50     21     35
  DEL PEAK 37(15Q14) WILD-TYPE    153    169    232
D69V8, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         50                          153
  CLUS_2                         21                          169
  CLUS_3                         35                          232
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED       19     12     18     13
  DEL PEAK 37(15Q14) WILD-TYPE    118     95    165     69
D69V9, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         19                          118
  CLUS_2                         12                           95
  CLUS_3                         18                          165
  CLUS_4                         13                           69
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED       28     20     14
  DEL PEAK 37(15Q14) WILD-TYPE    194    164     89
D69V10, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         28                          194
  CLUS_2                         20                          164
  CLUS_3                         14                           89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(15Q14) MUTATED       16     25     21
  DEL PEAK 37(15Q14) WILD-TYPE    169    136    138
D69V11, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                         16                          169
  CLUS_2                         25                          136
  CLUS_3                         21                          138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(15Q14) MUTATED        9     25     16     12
  DEL PEAK 37(15Q14) WILD-TYPE     82    112    172     77
D69V12, multiclass
        clus
vv       DEL PEAK 37(15Q14) MUTATED DEL PEAK 37(15Q14) WILD-TYPE
  CLUS_1                          9                           82
  CLUS_2                         25                          112
  CLUS_3                         16                          172
  CLUS_4                         12                           77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 38(16P12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED       26     20     18     20
  DEL PEAK 38(16P12.2) WILD-TYPE    121     76    134     93
D70V1, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           26                            121
  CLUS_2                           20                             76
  CLUS_3                           18                            134
  CLUS_4                           20                             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED       28     17     10     29
  DEL PEAK 38(16P12.2) WILD-TYPE    120     85     90    129
D70V2, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           28                            120
  CLUS_2                           17                             85
  CLUS_3                           10                             90
  CLUS_4                           29                            129
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED       27     23     17     21
  DEL PEAK 38(16P12.2) WILD-TYPE    129    160     70     99
D70V3, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           27                            129
  CLUS_2                           23                            160
  CLUS_3                           17                             70
  CLUS_4                           21                             99
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED       48     18     22
  DEL PEAK 38(16P12.2) WILD-TYPE    245    106    107
D70V4, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           48                            245
  CLUS_2                           18                            106
  CLUS_3                           22                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED       87     22      5
  DEL PEAK 38(16P12.2) WILD-TYPE    446    520     10
D70V5, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           87                            446
  CLUS_2                           22                            520
  CLUS_3                            5                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED       28     12      3      2
  DEL PEAK 38(16P12.2) WILD-TYPE    156    225     61    163
D70V6, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           28                            156
  CLUS_2                           12                            225
  CLUS_3                            3                             61
  CLUS_4                            2                            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED       36      8      7
  DEL PEAK 38(16P12.2) WILD-TYPE    197    227    185
D70V7, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           36                            197
  CLUS_2                            8                            227
  CLUS_3                            7                            185
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED       32      8     11
  DEL PEAK 38(16P12.2) WILD-TYPE    171    182    256
D70V8, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                           32                            171
  CLUS_2                            8                            182
  CLUS_3                           11                            256
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED        5      7      7      3
  DEL PEAK 38(16P12.2) WILD-TYPE    132    100    176     79
D70V9, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                            5                            132
  CLUS_2                            7                            100
  CLUS_3                            7                            176
  CLUS_4                            3                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED        7      5     10
  DEL PEAK 38(16P12.2) WILD-TYPE    215    179     93
D70V10, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                            7                            215
  CLUS_2                            5                            179
  CLUS_3                           10                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(16P12.2) MUTATED        9      7      6
  DEL PEAK 38(16P12.2) WILD-TYPE    176    154    153
D70V11, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                            9                            176
  CLUS_2                            7                            154
  CLUS_3                            6                            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(16P12.2) MUTATED        3      6      3     10
  DEL PEAK 38(16P12.2) WILD-TYPE     88    131    185     79
D70V12, multiclass
        clus
vv       DEL PEAK 38(16P12.2) MUTATED DEL PEAK 38(16P12.2) WILD-TYPE
  CLUS_1                            3                             88
  CLUS_2                            6                            131
  CLUS_3                            3                            185
  CLUS_4                           10                             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 39(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       31     24     16     19
  DEL PEAK 39(16Q23.1) WILD-TYPE    116     72    136     94
D71V1, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           31                            116
  CLUS_2                           24                             72
  CLUS_3                           16                            136
  CLUS_4                           19                             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       28     17     13     32
  DEL PEAK 39(16Q23.1) WILD-TYPE    120     85     87    126
D71V2, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           28                            120
  CLUS_2                           17                             85
  CLUS_3                           13                             87
  CLUS_4                           32                            126
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       31     32     14     20
  DEL PEAK 39(16Q23.1) WILD-TYPE    125    151     73    100
D71V3, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           31                            125
  CLUS_2                           32                            151
  CLUS_3                           14                             73
  CLUS_4                           20                            100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       50     20     27
  DEL PEAK 39(16Q23.1) WILD-TYPE    243    104    102
D71V4, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           50                            243
  CLUS_2                           20                            104
  CLUS_3                           27                            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       92     31      6
  DEL PEAK 39(16Q23.1) WILD-TYPE    441    511      9
D71V5, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           92                            441
  CLUS_2                           31                            511
  CLUS_3                            6                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       33     16      3      3
  DEL PEAK 39(16Q23.1) WILD-TYPE    151    221     61    162
D71V6, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           33                            151
  CLUS_2                           16                            221
  CLUS_3                            3                             61
  CLUS_4                            3                            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       42     11      9
  DEL PEAK 39(16Q23.1) WILD-TYPE    191    224    183
D71V7, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           42                            191
  CLUS_2                           11                            224
  CLUS_3                            9                            183
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       39      9     14
  DEL PEAK 39(16Q23.1) WILD-TYPE    164    181    253
D71V8, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           39                            164
  CLUS_2                            9                            181
  CLUS_3                           14                            253
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED       12      3      9      4
  DEL PEAK 39(16Q23.1) WILD-TYPE    125    104    174     78
D71V9, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           12                            125
  CLUS_2                            3                            104
  CLUS_3                            9                            174
  CLUS_4                            4                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       10      6     12
  DEL PEAK 39(16Q23.1) WILD-TYPE    212    178     91
D71V10, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           10                            212
  CLUS_2                            6                            178
  CLUS_3                           12                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16Q23.1) MUTATED       14      8      5
  DEL PEAK 39(16Q23.1) WILD-TYPE    171    153    154
D71V11, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                           14                            171
  CLUS_2                            8                            153
  CLUS_3                            5                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16Q23.1) MUTATED        4      5      7     11
  DEL PEAK 39(16Q23.1) WILD-TYPE     87    132    181     78
D71V12, multiclass
        clus
vv       DEL PEAK 39(16Q23.1) MUTATED DEL PEAK 39(16Q23.1) WILD-TYPE
  CLUS_1                            4                             87
  CLUS_2                            5                            132
  CLUS_3                            7                            181
  CLUS_4                           11                             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 40(17P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED       32     27     13     16
  DEL PEAK 40(17P13.1) WILD-TYPE    115     69    139     97
D72V1, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           32                            115
  CLUS_2                           27                             69
  CLUS_3                           13                            139
  CLUS_4                           16                             97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED       32     27      9     20
  DEL PEAK 40(17P13.1) WILD-TYPE    116     75     91    138
D72V2, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           32                            116
  CLUS_2                           27                             75
  CLUS_3                            9                             91
  CLUS_4                           20                            138
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED       27     35     15     16
  DEL PEAK 40(17P13.1) WILD-TYPE    129    148     72    104
D72V3, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           27                            129
  CLUS_2                           35                            148
  CLUS_3                           15                             72
  CLUS_4                           16                            104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED       51     22     20
  DEL PEAK 40(17P13.1) WILD-TYPE    242    102    109
D72V4, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           51                            242
  CLUS_2                           22                            102
  CLUS_3                           20                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED       82     29      5
  DEL PEAK 40(17P13.1) WILD-TYPE    451    513     10
D72V5, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           82                            451
  CLUS_2                           29                            513
  CLUS_3                            5                             10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED       21     10      3      2
  DEL PEAK 40(17P13.1) WILD-TYPE    163    227     61    163
D72V6, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           21                            163
  CLUS_2                           10                            227
  CLUS_3                            3                             61
  CLUS_4                            2                            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED       36      8      3
  DEL PEAK 40(17P13.1) WILD-TYPE    197    227    189
D72V7, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           36                            197
  CLUS_2                            8                            227
  CLUS_3                            3                            189
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED       30     13      4
  DEL PEAK 40(17P13.1) WILD-TYPE    173    177    263
D72V8, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                           30                            173
  CLUS_2                           13                            177
  CLUS_3                            4                            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED        7      6      3      2
  DEL PEAK 40(17P13.1) WILD-TYPE    130    101    180     80
D72V9, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                            7                            130
  CLUS_2                            6                            101
  CLUS_3                            3                            180
  CLUS_4                            2                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED        7      2      9
  DEL PEAK 40(17P13.1) WILD-TYPE    215    182     94
D72V10, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                            7                            215
  CLUS_2                            2                            182
  CLUS_3                            9                             94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(17P13.1) MUTATED        8      4      5
  DEL PEAK 40(17P13.1) WILD-TYPE    177    157    154
D72V11, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                            8                            177
  CLUS_2                            4                            157
  CLUS_3                            5                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(17P13.1) MUTATED        4      3      3      7
  DEL PEAK 40(17P13.1) WILD-TYPE     87    134    185     82
D72V12, multiclass
        clus
vv       DEL PEAK 40(17P13.1) MUTATED DEL PEAK 40(17P13.1) WILD-TYPE
  CLUS_1                            4                             87
  CLUS_2                            3                            134
  CLUS_3                            3                            185
  CLUS_4                            7                             82
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 41(17Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       35      9     12      5
  DEL PEAK 41(17Q11.2) WILD-TYPE    112     87    140    108
D73V1, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           35                            112
  CLUS_2                            9                             87
  CLUS_3                           12                            140
  CLUS_4                            5                            108
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       35      7      9     10
  DEL PEAK 41(17Q11.2) WILD-TYPE    113     95     91    148
D73V2, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           35                            113
  CLUS_2                            7                             95
  CLUS_3                            9                             91
  CLUS_4                           10                            148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       29     16      4     19
  DEL PEAK 41(17Q11.2) WILD-TYPE    127    167     83    101
D73V3, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           29                            127
  CLUS_2                           16                            167
  CLUS_3                            4                             83
  CLUS_4                           19                            101
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       26     24     18
  DEL PEAK 41(17Q11.2) WILD-TYPE    267    100    111
D73V4, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           26                            267
  CLUS_2                           24                            100
  CLUS_3                           18                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       66     21      6
  DEL PEAK 41(17Q11.2) WILD-TYPE    467    521      9
D73V5, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           66                            467
  CLUS_2                           21                            521
  CLUS_3                            6                              9
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       22      9      5      2
  DEL PEAK 41(17Q11.2) WILD-TYPE    162    228     59    163
D73V6, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           22                            162
  CLUS_2                            9                            228
  CLUS_3                            5                             59
  CLUS_4                            2                            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       29      7      4
  DEL PEAK 41(17Q11.2) WILD-TYPE    204    228    188
D73V7, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           29                            204
  CLUS_2                            7                            228
  CLUS_3                            4                            188
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED       25     11      4
  DEL PEAK 41(17Q11.2) WILD-TYPE    178    179    263
D73V8, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           25                            178
  CLUS_2                           11                            179
  CLUS_3                            4                            263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED       10      4      6      1
  DEL PEAK 41(17Q11.2) WILD-TYPE    127    103    177     81
D73V9, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                           10                            127
  CLUS_2                            4                            103
  CLUS_3                            6                            177
  CLUS_4                            1                             81
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED        7      6      8
  DEL PEAK 41(17Q11.2) WILD-TYPE    215    178     95
D73V10, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                            7                            215
  CLUS_2                            6                            178
  CLUS_3                            8                             95
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(17Q11.2) MUTATED        9      6      5
  DEL PEAK 41(17Q11.2) WILD-TYPE    176    155    154
D73V11, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                            9                            176
  CLUS_2                            6                            155
  CLUS_3                            5                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(17Q11.2) MUTATED        5      3      3      9
  DEL PEAK 41(17Q11.2) WILD-TYPE     86    134    185     80
D73V12, multiclass
        clus
vv       DEL PEAK 41(17Q11.2) MUTATED DEL PEAK 41(17Q11.2) WILD-TYPE
  CLUS_1                            5                             86
  CLUS_2                            3                            134
  CLUS_3                            3                            185
  CLUS_4                            9                             80
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 42(18Q23) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       19     18     11     16
  DEL PEAK 42(18Q23) WILD-TYPE    128     78    141     97
D74V1, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         19                          128
  CLUS_2                         18                           78
  CLUS_3                         11                          141
  CLUS_4                         16                           97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       22     15      4     23
  DEL PEAK 42(18Q23) WILD-TYPE    126     87     96    135
D74V2, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         22                          126
  CLUS_2                         15                           87
  CLUS_3                          4                           96
  CLUS_4                         23                          135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       23     26      9     14
  DEL PEAK 42(18Q23) WILD-TYPE    133    157     78    106
D74V3, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         23                          133
  CLUS_2                         26                          157
  CLUS_3                          9                           78
  CLUS_4                         14                          106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       36     15     21
  DEL PEAK 42(18Q23) WILD-TYPE    257    109    108
D74V4, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         36                          257
  CLUS_2                         15                          109
  CLUS_3                         21                          108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       78     70      3
  DEL PEAK 42(18Q23) WILD-TYPE    455    472     12
D74V5, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         78                          455
  CLUS_2                         70                          472
  CLUS_3                          3                           12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       32     24      5     35
  DEL PEAK 42(18Q23) WILD-TYPE    152    213     59    130
D74V6, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         32                          152
  CLUS_2                         24                          213
  CLUS_3                          5                           59
  CLUS_4                         35                          130
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       35     34     26
  DEL PEAK 42(18Q23) WILD-TYPE    198    201    166
D74V7, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         35                          198
  CLUS_2                         34                          201
  CLUS_3                         26                          166
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       29     24     42
  DEL PEAK 42(18Q23) WILD-TYPE    174    166    225
D74V8, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         29                          174
  CLUS_2                         24                          166
  CLUS_3                         42                          225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED       21     13     23     17
  DEL PEAK 42(18Q23) WILD-TYPE    116     94    160     65
D74V9, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         21                          116
  CLUS_2                         13                           94
  CLUS_3                         23                          160
  CLUS_4                         17                           65
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       33     25     16
  DEL PEAK 42(18Q23) WILD-TYPE    189    159     87
D74V10, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         33                          189
  CLUS_2                         25                          159
  CLUS_3                         16                           87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(18Q23) MUTATED       29     25     20
  DEL PEAK 42(18Q23) WILD-TYPE    156    136    139
D74V11, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                         29                          156
  CLUS_2                         25                          136
  CLUS_3                         20                          139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(18Q23) MUTATED        9     23     26     16
  DEL PEAK 42(18Q23) WILD-TYPE     82    114    162     73
D74V12, multiclass
        clus
vv       DEL PEAK 42(18Q23) MUTATED DEL PEAK 42(18Q23) WILD-TYPE
  CLUS_1                          9                           82
  CLUS_2                         23                          114
  CLUS_3                         26                          162
  CLUS_4                         16                           73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 43(19Q13.41) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       21     23     17     29
  DEL PEAK 43(19Q13.41) WILD-TYPE    126     73    135     84
D75V1, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            21                             126
  CLUS_2                            23                              73
  CLUS_3                            17                             135
  CLUS_4                            29                              84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       23     34      8     25
  DEL PEAK 43(19Q13.41) WILD-TYPE    125     68     92    133
D75V2, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            23                             125
  CLUS_2                            34                              68
  CLUS_3                             8                              92
  CLUS_4                            25                             133
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       21     43     12     20
  DEL PEAK 43(19Q13.41) WILD-TYPE    135    140     75    100
D75V3, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            21                             135
  CLUS_2                            43                             140
  CLUS_3                            12                              75
  CLUS_4                            20                             100
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED       62     19     15
  DEL PEAK 43(19Q13.41) WILD-TYPE    231    105    114
D75V4, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            62                             231
  CLUS_2                            19                             105
  CLUS_3                            15                             114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED       74    290      2
  DEL PEAK 43(19Q13.41) WILD-TYPE    459    252     13
D75V5, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            74                             459
  CLUS_2                           290                             252
  CLUS_3                             2                              13
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       26     81     15    165
  DEL PEAK 43(19Q13.41) WILD-TYPE    158    156     49      0
D75V6, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            26                             158
  CLUS_2                            81                             156
  CLUS_3                            15                              49
  CLUS_4                           165                               0
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED       43    128    121
  DEL PEAK 43(19Q13.41) WILD-TYPE    190    107     71
D75V7, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            43                             190
  CLUS_2                           128                             107
  CLUS_3                           121                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED       24     69    199
  DEL PEAK 43(19Q13.41) WILD-TYPE    179    121     68
D75V8, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            24                             179
  CLUS_2                            69                             121
  CLUS_3                           199                              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       50     36    107     74
  DEL PEAK 43(19Q13.41) WILD-TYPE     87     71     76      8
D75V9, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            50                              87
  CLUS_2                            36                              71
  CLUS_3                           107                              76
  CLUS_4                            74                               8
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED      129    118     20
  DEL PEAK 43(19Q13.41) WILD-TYPE     93     66     83
D75V10, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                           129                              93
  CLUS_2                           118                              66
  CLUS_3                            20                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(19Q13.41) MUTATED       61    110     95
  DEL PEAK 43(19Q13.41) WILD-TYPE    124     51     64
D75V11, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            61                             124
  CLUS_2                           110                              51
  CLUS_3                            95                              64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(19Q13.41) MUTATED       32    105    113     16
  DEL PEAK 43(19Q13.41) WILD-TYPE     59     32     75     73
D75V12, multiclass
        clus
vv       DEL PEAK 43(19Q13.41) MUTATED DEL PEAK 43(19Q13.41) WILD-TYPE
  CLUS_1                            32                              59
  CLUS_2                           105                              32
  CLUS_3                           113                              75
  CLUS_4                            16                              73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 44(19Q13.43) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       17     23      6     29
  DEL PEAK 44(19Q13.43) WILD-TYPE    130     73    146     84
D76V1, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            17                             130
  CLUS_2                            23                              73
  CLUS_3                             6                             146
  CLUS_4                            29                              84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       18     32      2     23
  DEL PEAK 44(19Q13.43) WILD-TYPE    130     70     98    135
D76V2, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            18                             130
  CLUS_2                            32                              70
  CLUS_3                             2                              98
  CLUS_4                            23                             135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       14     43      9     14
  DEL PEAK 44(19Q13.43) WILD-TYPE    142    140     78    106
D76V3, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            14                             142
  CLUS_2                            43                             140
  CLUS_3                             9                              78
  CLUS_4                            14                             106
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED       53     13     14
  DEL PEAK 44(19Q13.43) WILD-TYPE    240    111    115
D76V4, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            53                             240
  CLUS_2                            13                             111
  CLUS_3                            14                             115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED       52    299      3
  DEL PEAK 44(19Q13.43) WILD-TYPE    481    243     12
D76V5, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            52                             481
  CLUS_2                           299                             243
  CLUS_3                             3                              12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       21     89     15    163
  DEL PEAK 44(19Q13.43) WILD-TYPE    163    148     49      2
D76V6, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            21                             163
  CLUS_2                            89                             148
  CLUS_3                            15                              49
  CLUS_4                           163                               2
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED       39    134    120
  DEL PEAK 44(19Q13.43) WILD-TYPE    194    101     72
D76V7, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            39                             194
  CLUS_2                           134                             101
  CLUS_3                           120                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED       19     76    198
  DEL PEAK 44(19Q13.43) WILD-TYPE    184    114     69
D76V8, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            19                             184
  CLUS_2                            76                             114
  CLUS_3                           198                              69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       55     37    102     76
  DEL PEAK 44(19Q13.43) WILD-TYPE     82     70     81      6
D76V9, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            55                              82
  CLUS_2                            37                              70
  CLUS_3                           102                              81
  CLUS_4                            76                               6
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED      136    115     19
  DEL PEAK 44(19Q13.43) WILD-TYPE     86     69     84
D76V10, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                           136                              86
  CLUS_2                           115                              69
  CLUS_3                            19                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(19Q13.43) MUTATED       64    113     92
  DEL PEAK 44(19Q13.43) WILD-TYPE    121     48     67
D76V11, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            64                             121
  CLUS_2                           113                              48
  CLUS_3                            92                              67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(19Q13.43) MUTATED       36    108    110     15
  DEL PEAK 44(19Q13.43) WILD-TYPE     55     29     78     74
D76V12, multiclass
        clus
vv       DEL PEAK 44(19Q13.43) MUTATED DEL PEAK 44(19Q13.43) WILD-TYPE
  CLUS_1                            36                              55
  CLUS_2                           108                              29
  CLUS_3                           110                              78
  CLUS_4                            15                              74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 45(22Q13.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       55     39     60     38
  DEL PEAK 45(22Q13.32) WILD-TYPE     92     57     92     75
D77V1, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            55                              92
  CLUS_2                            39                              57
  CLUS_3                            60                              92
  CLUS_4                            38                              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       55     37     39     61
  DEL PEAK 45(22Q13.32) WILD-TYPE     93     65     61     97
D77V2, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            55                              93
  CLUS_2                            37                              65
  CLUS_3                            39                              61
  CLUS_4                            61                              97
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       59     82     24     41
  DEL PEAK 45(22Q13.32) WILD-TYPE     97    101     63     79
D77V3, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            59                              97
  CLUS_2                            82                             101
  CLUS_3                            24                              63
  CLUS_4                            41                              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED      107     44     55
  DEL PEAK 45(22Q13.32) WILD-TYPE    186     80     74
D77V4, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                           107                             186
  CLUS_2                            44                              80
  CLUS_3                            55                              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED      203     81      5
  DEL PEAK 45(22Q13.32) WILD-TYPE    330    461     10
D77V5, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                           203                             330
  CLUS_2                            81                             461
  CLUS_3                             5                              10
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       65     45     15      5
  DEL PEAK 45(22Q13.32) WILD-TYPE    119    192     49    160
D77V6, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            65                             119
  CLUS_2                            45                             192
  CLUS_3                            15                              49
  CLUS_4                             5                             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED       89     29     23
  DEL PEAK 45(22Q13.32) WILD-TYPE    144    206    169
D77V7, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            89                             144
  CLUS_2                            29                             206
  CLUS_3                            23                             169
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED       80     36     25
  DEL PEAK 45(22Q13.32) WILD-TYPE    123    154    242
D77V8, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            80                             123
  CLUS_2                            36                             154
  CLUS_3                            25                             242
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       26     23     21      7
  DEL PEAK 45(22Q13.32) WILD-TYPE    111     84    162     75
D77V9, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            26                             111
  CLUS_2                            23                              84
  CLUS_3                            21                             162
  CLUS_4                             7                              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED       27     18     32
  DEL PEAK 45(22Q13.32) WILD-TYPE    195    166     71
D77V10, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            27                             195
  CLUS_2                            18                             166
  CLUS_3                            32                              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(22Q13.32) MUTATED       43     18     15
  DEL PEAK 45(22Q13.32) WILD-TYPE    142    143    144
D77V11, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            43                             142
  CLUS_2                            18                             143
  CLUS_3                            15                             144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(22Q13.32) MUTATED       12     18     18     28
  DEL PEAK 45(22Q13.32) WILD-TYPE     79    119    170     61
D77V12, multiclass
        clus
vv       DEL PEAK 45(22Q13.32) MUTATED DEL PEAK 45(22Q13.32) WILD-TYPE
  CLUS_1                            12                              79
  CLUS_2                            18                             119
  CLUS_3                            18                             170
  CLUS_4                            28                              61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 46(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       24     32     25     27
  DEL PEAK 46(XP22.2) WILD-TYPE    123     64    127     86
D78V1, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          24                           123
  CLUS_2                          32                            64
  CLUS_3                          25                           127
  CLUS_4                          27                            86
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       22     36     18     32
  DEL PEAK 46(XP22.2) WILD-TYPE    126     66     82    126
D78V2, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          22                           126
  CLUS_2                          36                            66
  CLUS_3                          18                            82
  CLUS_4                          32                           126
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       25     48     16     22
  DEL PEAK 46(XP22.2) WILD-TYPE    131    135     71     98
D78V3, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          25                           131
  CLUS_2                          48                           135
  CLUS_3                          16                            71
  CLUS_4                          22                            98
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       66     18     27
  DEL PEAK 46(XP22.2) WILD-TYPE    227    106    102
D78V4, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          66                           227
  CLUS_2                          18                           106
  CLUS_3                          27                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       96    129      3
  DEL PEAK 46(XP22.2) WILD-TYPE    437    413     12
D78V5, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          96                           437
  CLUS_2                         129                           413
  CLUS_3                           3                            12
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       35     65      5     34
  DEL PEAK 46(XP22.2) WILD-TYPE    149    172     59    131
D78V6, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          35                           149
  CLUS_2                          65                           172
  CLUS_3                           5                            59
  CLUS_4                          34                           131
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       60     58     32
  DEL PEAK 46(XP22.2) WILD-TYPE    173    177    160
D78V7, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          60                           173
  CLUS_2                          58                           177
  CLUS_3                          32                           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       43     57     50
  DEL PEAK 46(XP22.2) WILD-TYPE    160    133    217
D78V8, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          43                           160
  CLUS_2                          57                           133
  CLUS_3                          50                           217
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       27     27     30     26
  DEL PEAK 46(XP22.2) WILD-TYPE    110     80    153     56
D78V9, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          27                           110
  CLUS_2                          27                            80
  CLUS_3                          30                           153
  CLUS_4                          26                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       54     34     22
  DEL PEAK 46(XP22.2) WILD-TYPE    168    150     81
D78V10, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          54                           168
  CLUS_2                          34                           150
  CLUS_3                          22                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(XP22.2) MUTATED       41     43     25
  DEL PEAK 46(XP22.2) WILD-TYPE    144    118    134
D78V11, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          41                           144
  CLUS_2                          43                           118
  CLUS_3                          25                           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(XP22.2) MUTATED       24     37     31     17
  DEL PEAK 46(XP22.2) WILD-TYPE     67    100    157     72
D78V12, multiclass
        clus
vv       DEL PEAK 46(XP22.2) MUTATED DEL PEAK 46(XP22.2) WILD-TYPE
  CLUS_1                          24                            67
  CLUS_2                          37                           100
  CLUS_3                          31                           157
  CLUS_4                          17                            72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 47(XQ21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       20     26     25     22
  DEL PEAK 47(XQ21.1) WILD-TYPE    127     70    127     91
D79V1, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          20                           127
  CLUS_2                          26                            70
  CLUS_3                          25                           127
  CLUS_4                          22                            91
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       16     32     16     29
  DEL PEAK 47(XQ21.1) WILD-TYPE    132     70     84    129
D79V2, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          16                           132
  CLUS_2                          32                            70
  CLUS_3                          16                            84
  CLUS_4                          29                           129
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       24     46     14     16
  DEL PEAK 47(XQ21.1) WILD-TYPE    132    137     73    104
D79V3, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          24                           132
  CLUS_2                          46                           137
  CLUS_3                          14                            73
  CLUS_4                          16                           104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       57     15     28
  DEL PEAK 47(XQ21.1) WILD-TYPE    236    109    101
D79V4, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          57                           236
  CLUS_2                          15                           109
  CLUS_3                          28                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       91     89      4
  DEL PEAK 47(XQ21.1) WILD-TYPE    442    453     11
D79V5, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          91                           442
  CLUS_2                          89                           453
  CLUS_3                           4                            11
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       40     39      3     30
  DEL PEAK 47(XQ21.1) WILD-TYPE    144    198     61    135
D79V6, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          40                           144
  CLUS_2                          39                           198
  CLUS_3                           3                            61
  CLUS_4                          30                           135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       57     38     21
  DEL PEAK 47(XQ21.1) WILD-TYPE    176    197    171
D79V7, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          57                           176
  CLUS_2                          38                           197
  CLUS_3                          21                           171
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       43     32     41
  DEL PEAK 47(XQ21.1) WILD-TYPE    160    158    226
D79V8, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          43                           160
  CLUS_2                          32                           158
  CLUS_3                          41                           226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       14     19     21     24
  DEL PEAK 47(XQ21.1) WILD-TYPE    123     88    162     58
D79V9, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          14                           123
  CLUS_2                          19                            88
  CLUS_3                          21                           162
  CLUS_4                          24                            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       36     23     19
  DEL PEAK 47(XQ21.1) WILD-TYPE    186    161     84
D79V10, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          36                           186
  CLUS_2                          23                           161
  CLUS_3                          19                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(XQ21.1) MUTATED       30     30     17
  DEL PEAK 47(XQ21.1) WILD-TYPE    155    131    142
D79V11, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          30                           155
  CLUS_2                          30                           131
  CLUS_3                          17                           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(XQ21.1) MUTATED       13     27     21     16
  DEL PEAK 47(XQ21.1) WILD-TYPE     78    110    167     73
D79V12, multiclass
        clus
vv       DEL PEAK 47(XQ21.1) MUTATED DEL PEAK 47(XQ21.1) WILD-TYPE
  CLUS_1                          13                            78
  CLUS_2                          27                           110
  CLUS_3                          21                           167
  CLUS_4                          16                            73
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
